Query 005249
Match_columns 706
No_of_seqs 267 out of 2001
Neff 5.8
Searched_HMMs 46136
Date Thu Mar 28 20:28:21 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/005249.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/005249hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0569 Permease of the major 100.0 2.6E-41 5.7E-46 377.8 42.2 424 3-698 8-472 (485)
2 KOG0254 Predicted transporter 100.0 3E-38 6.4E-43 357.1 40.5 424 5-700 44-503 (513)
3 TIGR00887 2A0109 phosphate:H+ 100.0 6.2E-37 1.3E-41 344.5 45.1 203 2-205 12-247 (502)
4 PRK10077 xylE D-xylose transpo 100.0 5.2E-36 1.1E-40 331.4 44.8 414 5-701 11-478 (479)
5 TIGR01299 synapt_SV2 synaptic 100.0 1.1E-34 2.4E-39 340.9 47.0 208 2-210 163-381 (742)
6 PF00083 Sugar_tr: Sugar (and 100.0 3.2E-41 6.9E-46 370.7 -19.1 411 11-695 5-451 (451)
7 TIGR00879 SP MFS transporter, 100.0 6.1E-33 1.3E-37 300.3 37.7 418 4-690 26-480 (481)
8 TIGR00898 2A0119 cation transp 100.0 1E-31 2.2E-36 300.3 29.0 175 27-207 110-287 (505)
9 PRK10642 proline/glycine betai 100.0 7.6E-30 1.7E-34 286.5 42.5 184 6-190 16-219 (490)
10 TIGR02332 HpaX 4-hydroxyphenyl 100.0 1.6E-29 3.5E-34 277.9 37.6 185 4-188 6-194 (412)
11 PRK11551 putative 3-hydroxyphe 100.0 5.9E-29 1.3E-33 269.4 40.2 186 2-189 11-196 (406)
12 PRK09556 uhpT sugar phosphate 100.0 2.5E-29 5.5E-34 280.2 34.3 184 4-187 27-216 (467)
13 PRK11663 regulatory protein Uh 100.0 1.3E-28 2.8E-33 272.0 37.9 183 4-188 21-203 (434)
14 PRK10406 alpha-ketoglutarate t 100.0 5.3E-28 1.2E-32 266.7 41.5 184 3-187 19-222 (432)
15 PRK12307 putative sialic acid 100.0 4.4E-28 9.6E-33 264.3 40.1 167 3-171 15-181 (426)
16 TIGR00891 2A0112 putative sial 100.0 1.5E-27 3.2E-32 255.1 40.2 186 2-188 8-193 (405)
17 KOG0253 Synaptic vesicle trans 100.0 6.3E-29 1.4E-33 264.9 28.8 412 2-688 74-527 (528)
18 TIGR00903 2A0129 major facilit 100.0 9.5E-28 2.1E-32 261.5 37.0 169 18-189 3-171 (368)
19 TIGR00890 2A0111 Oxalate/Forma 100.0 7.1E-28 1.5E-32 253.6 34.1 174 9-186 7-180 (377)
20 PRK03545 putative arabinose tr 100.0 5.3E-27 1.1E-31 254.3 40.7 182 3-186 6-187 (390)
21 TIGR00893 2A0114 d-galactonate 100.0 1.5E-27 3.4E-32 250.8 35.2 171 15-187 3-173 (399)
22 PRK09952 shikimate transporter 100.0 4.7E-27 1E-31 260.4 39.0 185 3-189 19-225 (438)
23 COG2271 UhpC Sugar phosphate p 100.0 9.2E-28 2E-32 261.3 28.2 186 3-188 26-211 (448)
24 PRK11273 glpT sn-glycerol-3-ph 100.0 2.6E-26 5.6E-31 255.0 40.0 182 4-188 27-213 (452)
25 PRK03893 putative sialic acid 100.0 4.6E-26 1E-30 253.6 40.7 183 3-188 17-199 (496)
26 KOG0252 Inorganic phosphate tr 100.0 3.1E-28 6.7E-33 266.2 21.5 416 2-699 37-516 (538)
27 TIGR00895 2A0115 benzoate tran 100.0 2.9E-26 6.2E-31 243.6 35.4 186 3-190 14-199 (398)
28 PRK14995 methyl viologen resis 100.0 1.3E-25 2.9E-30 252.8 42.7 185 1-187 1-186 (495)
29 COG2814 AraJ Arabinose efflux 100.0 8.7E-26 1.9E-30 247.1 39.2 180 3-184 10-189 (394)
30 PRK09705 cynX putative cyanate 100.0 6.8E-26 1.5E-30 247.3 38.2 166 6-174 10-175 (393)
31 PRK15075 citrate-proton sympor 100.0 7E-26 1.5E-30 250.0 38.8 167 4-170 13-199 (434)
32 PRK10091 MFS transport protein 99.9 8.8E-25 1.9E-29 236.9 38.3 177 8-186 5-181 (382)
33 PRK05122 major facilitator sup 99.9 1.3E-24 2.9E-29 235.3 38.9 168 5-174 14-190 (399)
34 TIGR00712 glpT glycerol-3-phos 99.9 1.8E-25 3.9E-30 247.1 32.6 183 4-188 25-211 (438)
35 KOG0255 Synaptic vesicle trans 99.9 3.7E-25 8E-30 249.8 34.6 169 34-208 111-279 (521)
36 TIGR00894 2A0114euk Na(+)-depe 99.9 2.9E-25 6.2E-30 246.5 32.3 185 2-188 15-224 (465)
37 TIGR00881 2A0104 phosphoglycer 99.9 1.6E-25 3.5E-30 235.8 28.5 174 13-187 2-175 (379)
38 PRK12382 putative transporter; 99.9 3.2E-24 6.9E-29 232.1 38.8 164 7-172 16-188 (392)
39 PLN00028 nitrate transmembrane 99.9 3.5E-24 7.6E-29 240.5 38.8 181 5-186 35-222 (476)
40 PRK03699 putative transporter; 99.9 3.4E-24 7.4E-29 233.2 36.9 175 3-178 4-178 (394)
41 PRK10489 enterobactin exporter 99.9 1.8E-24 3.9E-29 236.6 34.5 172 12-186 23-199 (417)
42 PRK15402 multidrug efflux syst 99.9 1.7E-23 3.7E-28 227.8 40.1 183 2-186 9-191 (406)
43 TIGR00710 efflux_Bcr_CflA drug 99.9 1.7E-23 3.7E-28 223.1 39.1 174 11-186 10-183 (385)
44 PRK10213 nepI ribonucleoside t 99.9 2.5E-23 5.3E-28 227.7 41.4 183 2-186 16-198 (394)
45 PRK03633 putative MFS family t 99.9 2.6E-23 5.6E-28 225.1 41.1 152 1-152 1-152 (381)
46 cd06174 MFS The Major Facilita 99.9 8.3E-24 1.8E-28 219.7 34.7 169 10-180 3-171 (352)
47 PRK15034 nitrate/nitrite trans 99.9 2.6E-23 5.6E-28 233.2 40.5 180 6-186 34-235 (462)
48 PRK09874 drug efflux system pr 99.9 1.5E-23 3.2E-28 226.5 37.2 175 9-186 17-196 (408)
49 PRK10504 putative transporter; 99.9 1.9E-23 4.2E-28 231.7 39.0 178 7-186 11-188 (471)
50 TIGR00900 2A0121 H+ Antiporter 99.9 2.2E-23 4.8E-28 218.9 37.5 166 11-178 4-174 (365)
51 TIGR00899 2A0120 sugar efflux 99.9 3.1E-23 6.7E-28 220.7 37.5 173 13-187 4-180 (375)
52 TIGR00711 efflux_EmrB drug res 99.9 1.3E-23 2.8E-28 232.3 35.8 178 7-186 3-180 (485)
53 TIGR00892 2A0113 monocarboxyla 99.9 8.5E-24 1.8E-28 235.9 32.0 179 3-184 16-195 (455)
54 TIGR00897 2A0118 polyol permea 99.9 9.3E-23 2E-27 222.8 39.5 175 9-185 16-195 (402)
55 PF07690 MFS_1: Major Facilita 99.9 2.4E-23 5.3E-28 218.0 30.5 173 12-186 2-175 (352)
56 TIGR00883 2A0106 metabolite-pr 99.9 2E-23 4.3E-28 221.1 30.2 171 16-187 3-194 (394)
57 PRK10473 multidrug efflux syst 99.9 6.3E-22 1.4E-26 214.2 40.9 172 13-186 10-181 (392)
58 PRK10054 putative transporter; 99.9 7.5E-22 1.6E-26 216.1 38.8 172 12-186 13-185 (395)
59 PRK11102 bicyclomycin/multidru 99.9 7.3E-22 1.6E-26 211.4 37.8 164 21-186 6-169 (377)
60 PRK11043 putative transporter; 99.9 2E-21 4.3E-26 211.0 40.7 176 8-186 8-183 (401)
61 PRK11646 multidrug resistance 99.9 3E-21 6.6E-26 211.6 39.0 171 12-185 16-187 (400)
62 PRK15011 sugar efflux transpor 99.9 5.3E-21 1.1E-25 208.4 39.7 176 9-187 18-198 (393)
63 TIGR00885 fucP L-fucose:H+ sym 99.9 3.4E-21 7.3E-26 212.8 38.0 172 7-178 4-202 (410)
64 PRK15403 multidrug efflux syst 99.9 7.8E-21 1.7E-25 209.5 40.8 177 8-186 18-194 (413)
65 PRK11652 emrD multidrug resist 99.9 1.2E-20 2.7E-25 204.3 39.7 183 3-187 5-187 (394)
66 PRK10133 L-fucose transporter; 99.9 9.7E-21 2.1E-25 210.9 39.7 149 4-152 24-175 (438)
67 KOG2532 Permease of the major 99.9 7.4E-22 1.6E-26 222.1 30.4 153 34-188 66-221 (466)
68 TIGR00886 2A0108 nitrite extru 99.9 2.7E-21 5.8E-26 205.5 31.1 177 10-187 5-192 (366)
69 COG2223 NarK Nitrate/nitrite t 99.9 1.8E-21 3.9E-26 212.3 29.2 180 4-187 12-197 (417)
70 KOG1330 Sugar transporter/spin 99.9 7.9E-23 1.7E-27 224.7 18.3 186 1-187 28-213 (493)
71 KOG2533 Permease of the major 99.9 1.8E-21 4E-26 220.1 27.5 185 4-188 43-232 (495)
72 PRK11010 ampG muropeptide tran 99.9 8.4E-20 1.8E-24 206.3 40.4 173 10-187 16-198 (491)
73 TIGR00896 CynX cyanate transpo 99.9 1.7E-20 3.8E-25 200.3 31.9 150 23-174 17-166 (355)
74 PRK11195 lysophospholipid tran 99.9 1.2E-19 2.6E-24 198.6 38.7 170 11-187 8-177 (393)
75 TIGR00902 2A0127 phenyl propri 99.9 2.2E-19 4.9E-24 194.9 37.1 155 11-171 9-167 (382)
76 PRK09528 lacY galactoside perm 99.9 7.3E-20 1.6E-24 200.7 32.2 171 12-185 16-193 (420)
77 TIGR00889 2A0110 nucleoside tr 99.9 3.4E-19 7.3E-24 197.1 37.1 167 11-187 7-183 (418)
78 PRK08633 2-acyl-glycerophospho 99.9 1.5E-19 3.2E-24 221.2 37.1 165 23-187 27-203 (1146)
79 PRK11902 ampG muropeptide tran 99.9 2.1E-18 4.5E-23 188.4 40.8 172 11-187 4-185 (402)
80 PRK11128 putative 3-phenylprop 99.9 1.9E-18 4E-23 187.5 37.6 155 14-174 12-170 (382)
81 PTZ00207 hypothetical protein; 99.9 1.7E-18 3.6E-23 199.6 39.2 197 3-205 25-229 (591)
82 TIGR00882 2A0105 oligosacchari 99.9 7.1E-19 1.5E-23 191.2 34.2 172 10-186 6-186 (396)
83 TIGR00792 gph sugar (Glycoside 99.9 5.2E-19 1.1E-23 193.4 32.9 166 21-186 14-197 (437)
84 TIGR00901 2A0125 AmpG-related 99.8 1.3E-18 2.8E-23 185.7 30.7 160 23-186 5-181 (356)
85 KOG2504 Monocarboxylate transp 99.8 1.6E-19 3.4E-24 205.4 23.9 182 3-187 43-225 (509)
86 PRK06814 acylglycerophosphoeth 99.8 1.8E-18 3.8E-23 212.8 34.5 176 8-186 17-197 (1140)
87 TIGR00924 yjdL_sub1_fam amino 99.8 1.9E-17 4.1E-22 186.6 37.4 166 9-176 13-185 (475)
88 TIGR02718 sider_RhtX_FptX side 99.8 1.6E-16 3.4E-21 172.5 39.9 175 8-184 3-185 (390)
89 PRK10207 dipeptide/tripeptide 99.8 4.1E-17 8.8E-22 184.8 35.5 174 8-184 16-194 (489)
90 TIGR00806 rfc RFC reduced fola 99.8 3.6E-17 7.9E-22 182.9 30.5 165 20-188 40-207 (511)
91 COG0738 FucP Fucose permease [ 99.8 4.3E-16 9.3E-21 169.7 33.7 172 5-176 12-203 (422)
92 TIGR01301 GPH_sucrose GPH fami 99.8 1.2E-15 2.6E-20 172.4 38.3 176 12-187 10-222 (477)
93 PF05977 MFS_3: Transmembrane 99.8 1.7E-15 3.7E-20 173.1 37.9 164 10-175 14-182 (524)
94 PRK09584 tppB putative tripept 99.8 1.4E-15 3.1E-20 172.5 34.8 165 10-176 25-194 (500)
95 PF06609 TRI12: Fungal trichot 99.8 7E-15 1.5E-19 169.4 40.6 171 11-185 49-219 (599)
96 PRK09669 putative symporter Ya 99.7 1.1E-15 2.3E-20 169.7 31.3 159 27-185 31-206 (444)
97 TIGR00805 oat sodium-independe 99.7 8.9E-17 1.9E-21 187.5 18.8 179 7-186 34-283 (633)
98 PF03825 Nuc_H_symport: Nucleo 99.7 3.1E-14 6.6E-19 157.9 37.1 174 11-187 7-183 (400)
99 KOG3764 Vesicular amine transp 99.7 4.1E-16 8.9E-21 169.2 20.6 150 35-186 100-250 (464)
100 PRK10429 melibiose:sodium symp 99.7 2E-14 4.2E-19 161.5 35.0 175 12-186 12-204 (473)
101 COG2807 CynX Cyanate permease 99.7 4.1E-14 8.9E-19 152.6 33.3 172 4-178 10-181 (395)
102 PF13347 MFS_2: MFS/sugar tran 99.6 5.5E-14 1.2E-18 155.3 28.2 159 27-185 23-200 (428)
103 KOG2615 Permease of the major 99.6 1.1E-14 2.4E-19 157.5 21.1 119 36-155 63-181 (451)
104 TIGR00788 fbt folate/biopterin 99.6 5E-14 1.1E-18 158.7 27.5 174 8-186 28-211 (468)
105 PRK09848 glucuronide transport 99.6 4.9E-13 1.1E-17 148.5 33.9 129 13-141 15-157 (448)
106 PRK15462 dipeptide/tripeptide 99.6 2E-12 4.3E-17 147.0 38.6 161 12-174 15-180 (493)
107 PF01306 LacY_symp: LacY proto 99.6 2.9E-13 6.3E-18 150.1 30.9 126 550-685 279-405 (412)
108 PRK11462 putative transporter; 99.6 1.4E-12 3E-17 146.6 35.5 164 22-185 25-206 (460)
109 PF11700 ATG22: Vacuole efflux 99.6 8.2E-12 1.8E-16 141.6 41.2 148 41-188 70-252 (477)
110 PRK10642 proline/glycine betai 99.6 4.1E-13 9E-18 151.3 26.7 185 22-208 266-459 (490)
111 KOG2563 Permease of the major 99.6 1.4E-13 3E-18 151.9 21.7 185 2-187 41-239 (480)
112 KOG4686 Predicted sugar transp 99.5 7.1E-14 1.5E-18 146.1 10.2 148 3-150 41-192 (459)
113 TIGR00880 2_A_01_02 Multidrug 99.5 7.2E-13 1.6E-17 119.7 13.6 137 47-185 4-140 (141)
114 COG2211 MelB Na+/melibiose sym 99.5 1.1E-10 2.3E-15 131.3 33.0 174 13-186 19-210 (467)
115 TIGR01299 synapt_SV2 synaptic 99.4 6.7E-11 1.5E-15 140.5 24.8 139 44-186 598-736 (742)
116 TIGR00889 2A0110 nucleoside tr 99.4 6.6E-11 1.4E-15 131.2 22.9 160 27-186 229-405 (418)
117 cd06174 MFS The Major Facilita 99.4 7.5E-11 1.6E-15 122.6 21.6 165 13-179 182-348 (352)
118 PRK09528 lacY galactoside perm 99.3 3.9E-11 8.3E-16 131.9 19.1 150 35-186 256-406 (420)
119 TIGR00890 2A0111 Oxalate/Forma 99.3 5.3E-11 1.2E-15 125.5 19.1 148 26-175 225-374 (377)
120 TIGR01272 gluP glucose/galacto 99.3 2.9E-10 6.3E-15 121.6 24.5 89 89-177 5-107 (310)
121 COG2270 Permeases of the major 99.3 1.1E-09 2.4E-14 120.8 27.9 148 41-188 58-225 (438)
122 PRK05122 major facilitator sup 99.3 3E-10 6.4E-15 123.4 23.4 158 25-186 235-392 (399)
123 PRK10077 xylE D-xylose transpo 99.3 3.1E-10 6.8E-15 126.0 23.1 164 23-186 288-460 (479)
124 TIGR00879 SP MFS transporter, 99.3 1.2E-10 2.6E-15 126.4 18.6 176 9-186 287-473 (481)
125 PRK09556 uhpT sugar phosphate 99.3 3.8E-10 8.3E-15 126.3 22.7 170 10-179 262-445 (467)
126 PRK11551 putative 3-hydroxyphe 99.3 4.8E-10 1E-14 121.9 22.7 158 22-180 236-393 (406)
127 PRK12382 putative transporter; 99.3 4.6E-10 1E-14 121.8 22.3 159 22-184 232-390 (392)
128 PRK15011 sugar efflux transpor 99.3 6.6E-10 1.4E-14 121.5 23.6 155 27-185 237-392 (393)
129 COG3104 PTR2 Dipeptide/tripept 99.2 3.4E-09 7.4E-14 119.0 27.8 151 30-183 46-205 (498)
130 PRK09874 drug efflux system pr 99.2 6.5E-10 1.4E-14 120.4 20.2 161 23-185 236-400 (408)
131 PRK10489 enterobactin exporter 99.2 8.4E-10 1.8E-14 121.1 21.2 159 26-186 243-402 (417)
132 TIGR00899 2A0120 sugar efflux 99.2 2E-09 4.4E-14 114.7 23.0 150 31-184 225-374 (375)
133 PRK03545 putative arabinose tr 99.2 2.4E-09 5.2E-14 116.4 23.6 155 29-187 229-384 (390)
134 PRK09952 shikimate transporter 99.2 4.6E-09 9.9E-14 117.0 24.9 155 31-186 276-435 (438)
135 TIGR00902 2A0127 phenyl propri 99.2 4E-09 8.7E-14 114.8 23.1 154 19-176 218-372 (382)
136 PRK03633 putative MFS family t 99.2 4.9E-09 1.1E-13 113.9 23.2 147 25-176 219-365 (381)
137 TIGR00893 2A0114 d-galactonate 99.1 3.5E-09 7.6E-14 111.6 21.0 167 11-180 220-396 (399)
138 TIGR00883 2A0106 metabolite-pr 99.1 2E-09 4.4E-14 114.2 19.2 157 15-173 228-391 (394)
139 PRK03699 putative transporter; 99.1 3E-09 6.6E-14 116.1 20.1 163 13-178 212-375 (394)
140 TIGR00897 2A0118 polyol permea 99.1 9E-09 2E-13 112.9 23.6 161 15-179 231-397 (402)
141 KOG2325 Predicted transporter/ 99.1 3.8E-10 8.1E-15 127.3 12.6 184 3-187 31-233 (488)
142 PRK11273 glpT sn-glycerol-3-ph 99.1 9.4E-09 2E-13 114.7 23.3 170 12-183 259-435 (452)
143 TIGR00892 2A0113 monocarboxyla 99.1 2.4E-09 5.2E-14 120.0 18.5 157 19-177 254-415 (455)
144 PRK03893 putative sialic acid 99.1 3.7E-09 8E-14 118.2 19.9 147 26-174 295-444 (496)
145 TIGR00891 2A0112 putative sial 99.1 4.8E-09 1E-13 112.5 19.2 135 30-166 263-399 (405)
146 TIGR00887 2A0109 phosphate:H+ 99.1 4E-09 8.7E-14 119.4 18.8 159 27-186 309-491 (502)
147 PRK09705 cynX putative cyanate 99.1 1.4E-08 2.9E-13 111.4 22.3 164 21-187 220-385 (393)
148 TIGR00895 2A0115 benzoate tran 99.1 1E-08 2.2E-13 109.3 20.4 138 13-150 257-394 (398)
149 TIGR00710 efflux_Bcr_CflA drug 99.1 3.6E-09 7.9E-14 113.0 16.4 127 550-686 60-186 (385)
150 PRK12307 putative sialic acid 99.0 1.8E-08 3.9E-13 110.3 21.9 137 25-163 250-388 (426)
151 PRK15075 citrate-proton sympor 99.0 2.5E-08 5.5E-13 110.6 23.2 133 18-150 250-388 (434)
152 PRK10473 multidrug efflux syst 99.0 4.5E-09 9.7E-14 114.1 16.4 160 517-686 3-184 (392)
153 PRK11663 regulatory protein Uh 99.0 1.3E-08 2.7E-13 113.1 20.2 169 15-186 252-427 (434)
154 PRK08633 2-acyl-glycerophospho 99.0 1.1E-08 2.4E-13 126.0 21.3 154 30-184 257-411 (1146)
155 TIGR00900 2A0121 H+ Antiporter 99.0 2E-08 4.3E-13 105.8 20.2 125 27-151 232-358 (365)
156 TIGR00711 efflux_EmrB drug res 99.0 1.9E-09 4E-14 119.7 12.0 154 523-686 8-183 (485)
157 PRK10406 alpha-ketoglutarate t 99.0 4.1E-08 8.9E-13 108.8 22.7 158 25-185 262-425 (432)
158 TIGR00792 gph sugar (Glycoside 99.0 3.6E-08 7.8E-13 108.1 21.8 130 23-153 239-377 (437)
159 PRK11128 putative 3-phenylprop 99.0 6.2E-08 1.3E-12 105.4 23.3 146 27-176 226-372 (382)
160 TIGR02332 HpaX 4-hydroxyphenyl 99.0 7.3E-09 1.6E-13 114.4 16.1 126 550-685 63-194 (412)
161 TIGR00882 2A0105 oligosacchari 99.0 3.1E-08 6.7E-13 108.0 20.7 143 37-181 250-393 (396)
162 PF03092 BT1: BT1 family; Int 99.0 8.5E-08 1.8E-12 107.6 23.7 157 26-185 10-177 (433)
163 TIGR00880 2_A_01_02 Multidrug 99.0 7.3E-09 1.6E-13 93.4 12.1 124 550-683 18-141 (141)
164 KOG3626 Organic anion transpor 99.0 7.4E-08 1.6E-12 113.1 23.3 179 7-186 98-345 (735)
165 PRK10504 putative transporter; 98.9 7.2E-08 1.6E-12 107.4 22.1 138 16-153 271-412 (471)
166 TIGR00898 2A0119 cation transp 98.9 2.2E-08 4.8E-13 112.5 17.8 148 31-186 348-497 (505)
167 PRK14995 methyl viologen resis 98.9 1.3E-08 2.8E-13 115.3 15.2 157 519-685 8-187 (495)
168 PF05977 MFS_3: Transmembrane 98.9 1.1E-07 2.3E-12 109.5 22.5 152 26-179 238-390 (524)
169 PRK11010 ampG muropeptide tran 98.9 1.4E-07 3E-12 107.2 23.3 151 29-181 246-401 (491)
170 TIGR02718 sider_RhtX_FptX side 98.9 1.5E-07 3.2E-12 102.5 22.0 148 28-177 230-385 (390)
171 PF11700 ATG22: Vacuole efflux 98.9 2.1E-07 4.6E-12 105.9 24.0 160 25-186 301-470 (477)
172 PF03209 PUCC: PUCC protein; 98.9 4.2E-06 9.2E-11 92.7 32.8 120 32-152 6-147 (403)
173 PRK15403 multidrug efflux syst 98.9 3.6E-08 7.8E-13 109.1 16.8 126 550-685 71-196 (413)
174 PRK15402 multidrug efflux syst 98.9 2.5E-07 5.5E-12 101.1 23.2 156 27-185 236-397 (406)
175 PF06813 Nodulin-like: Nodulin 98.9 7.6E-08 1.6E-12 100.8 18.1 178 4-187 1-185 (250)
176 TIGR00901 2A0125 AmpG-related 98.9 5.9E-08 1.3E-12 103.9 17.7 118 23-140 226-355 (356)
177 KOG2816 Predicted transporter 98.9 9.3E-07 2E-11 100.3 28.2 173 7-186 23-202 (463)
178 KOG0569 Permease of the major 98.9 1.4E-07 3E-12 107.1 21.5 176 6-186 272-457 (485)
179 TIGR00712 glpT glycerol-3-phos 98.9 7.9E-08 1.7E-12 106.8 19.1 160 25-186 270-436 (438)
180 PLN00028 nitrate transmembrane 98.9 6.9E-08 1.5E-12 109.0 18.1 150 30-184 277-433 (476)
181 PF03137 OATP: Organic Anion T 98.9 2.7E-10 5.9E-15 131.1 -1.6 175 10-185 7-251 (539)
182 COG0477 ProP Permeases of the 98.8 3.4E-07 7.4E-12 90.5 20.4 163 12-174 8-176 (338)
183 COG2814 AraJ Arabinose efflux 98.8 2.2E-07 4.7E-12 102.9 20.8 164 17-184 223-387 (394)
184 PRK10054 putative transporter; 98.8 1.2E-07 2.6E-12 104.3 18.6 151 34-187 237-388 (395)
185 PRK06814 acylglycerophosphoeth 98.8 1.2E-07 2.6E-12 117.5 20.7 152 26-178 245-417 (1140)
186 PRK09848 glucuronide transport 98.8 3.8E-07 8.3E-12 101.5 22.1 131 23-153 245-385 (448)
187 PRK11652 emrD multidrug resist 98.8 1E-07 2.3E-12 103.5 16.9 126 550-685 63-188 (394)
188 PRK11102 bicyclomycin/multidru 98.8 5.3E-08 1.1E-12 104.5 14.0 125 550-684 46-170 (377)
189 PRK11195 lysophospholipid tran 98.8 5.5E-07 1.2E-11 99.0 22.3 143 30-176 230-373 (393)
190 PRK10213 nepI ribonucleoside t 98.8 1E-06 2.2E-11 96.9 23.7 145 29-176 240-384 (394)
191 PRK10091 MFS transport protein 98.8 8.4E-07 1.8E-11 96.6 22.5 149 28-179 222-372 (382)
192 PF01770 Folate_carrier: Reduc 98.8 5.2E-06 1.1E-10 92.6 28.5 161 26-188 24-186 (412)
193 TIGR00881 2A0104 phosphoglycer 98.8 2.2E-07 4.7E-12 98.2 17.0 152 12-165 222-379 (379)
194 TIGR00886 2A0108 nitrite extru 98.8 1.9E-07 4.1E-12 99.5 16.1 123 550-683 57-191 (366)
195 COG2270 Permeases of the major 98.7 3E-07 6.6E-12 101.8 17.9 179 5-186 253-431 (438)
196 PF07690 MFS_1: Major Facilita 98.7 4.1E-07 8.9E-12 95.5 17.1 127 21-147 221-352 (352)
197 PRK11646 multidrug resistance 98.7 9.1E-07 2E-11 97.5 20.5 152 27-178 229-383 (400)
198 PF01306 LacY_symp: LacY proto 98.7 6.5E-07 1.4E-11 99.9 19.0 170 15-187 234-404 (412)
199 PRK11902 ampG muropeptide tran 98.7 2.2E-06 4.8E-11 93.9 23.0 144 30-179 234-386 (402)
200 PF05631 DUF791: Protein of un 98.7 1.6E-06 3.5E-11 94.6 21.3 160 26-186 54-219 (354)
201 PRK10429 melibiose:sodium symp 98.7 1.4E-06 3.1E-11 98.2 21.7 135 19-153 244-390 (473)
202 TIGR01272 gluP glucose/galacto 98.7 1.9E-06 4.2E-11 92.3 21.7 155 11-170 145-302 (310)
203 TIGR00903 2A0129 major facilit 98.7 1.5E-06 3.2E-11 95.4 21.0 166 11-185 197-366 (368)
204 PRK15462 dipeptide/tripeptide 98.7 3.6E-07 7.7E-12 104.4 16.2 120 550-678 65-187 (493)
205 TIGR00896 CynX cyanate transpo 98.7 1.4E-06 3.1E-11 93.3 19.9 130 23-153 214-345 (355)
206 TIGR00894 2A0114euk Na(+)-depe 98.7 9.1E-07 2E-11 98.7 18.8 172 9-181 264-448 (465)
207 PRK10207 dipeptide/tripeptide 98.6 5.8E-07 1.3E-11 102.4 16.6 114 550-672 70-186 (489)
208 PF03825 Nuc_H_symport: Nucleo 98.6 4.6E-06 1E-10 93.0 23.2 173 14-186 215-398 (400)
209 KOG2504 Monocarboxylate transp 98.6 5.2E-07 1.1E-11 103.5 16.0 170 8-179 300-472 (509)
210 PRK09669 putative symporter Ya 98.6 3.8E-06 8.1E-11 93.6 22.3 128 26-153 249-385 (444)
211 COG2271 UhpC Sugar phosphate p 98.6 1.1E-06 2.3E-11 97.6 17.2 176 7-184 253-435 (448)
212 PRK15034 nitrate/nitrite trans 98.6 4.1E-06 8.9E-11 95.1 21.1 168 15-184 261-455 (462)
213 PRK10133 L-fucose transporter; 98.6 4.9E-06 1.1E-10 93.2 20.9 142 30-176 283-426 (438)
214 PF13347 MFS_2: MFS/sugar tran 98.6 2.4E-06 5.2E-11 94.7 18.1 142 11-153 230-381 (428)
215 PRK11043 putative transporter; 98.5 1.4E-05 3.1E-10 87.1 23.0 123 27-150 224-351 (401)
216 COG2223 NarK Nitrate/nitrite t 98.5 1.9E-06 4.1E-11 95.4 15.9 171 10-182 222-400 (417)
217 TIGR00924 yjdL_sub1_fam amino 98.5 1E-05 2.2E-10 91.7 22.0 140 43-184 314-469 (475)
218 PRK09584 tppB putative tripept 98.5 9.6E-06 2.1E-10 92.7 21.7 143 43-185 318-481 (500)
219 KOG0254 Predicted transporter 98.5 5E-06 1.1E-10 94.9 17.7 180 12-201 301-495 (513)
220 PF06609 TRI12: Fungal trichot 98.4 1.1E-06 2.4E-11 102.1 11.8 123 550-683 98-221 (599)
221 KOG0253 Synaptic vesicle trans 98.4 1.4E-06 3.1E-11 95.0 10.6 132 51-186 391-522 (528)
222 KOG4686 Predicted sugar transp 98.4 8.8E-06 1.9E-10 86.3 15.3 167 6-176 267-436 (459)
223 PRK11462 putative transporter; 98.3 0.0001 2.2E-09 83.3 24.6 138 16-153 238-384 (460)
224 KOG0255 Synaptic vesicle trans 98.3 5.2E-06 1.1E-10 94.4 13.5 121 550-684 138-258 (521)
225 KOG2615 Permease of the major 98.3 2.1E-06 4.6E-11 94.0 9.3 124 550-684 88-217 (451)
226 PTZ00207 hypothetical protein; 98.3 2.1E-05 4.6E-10 91.8 18.0 141 534-681 44-206 (591)
227 COG2211 MelB Na+/melibiose sym 98.3 5E-05 1.1E-09 86.1 20.0 141 13-153 243-393 (467)
228 KOG0637 Sucrose transporter an 98.2 8.4E-06 1.8E-10 91.2 12.5 126 26-151 52-200 (498)
229 TIGR00805 oat sodium-independe 98.2 1.9E-05 4.1E-10 93.0 14.7 133 550-683 88-283 (633)
230 TIGR00926 2A1704 Peptide:H+ sy 98.2 6.5E-05 1.4E-09 88.9 18.8 154 27-180 9-179 (654)
231 TIGR00885 fucP L-fucose:H+ sym 98.2 0.00014 3E-09 80.9 20.5 143 26-171 252-400 (410)
232 PF02487 CLN3: CLN3 protein; 98.2 0.0023 5.1E-08 71.6 29.6 135 45-185 63-197 (402)
233 KOG2532 Permease of the major 98.1 3.9E-05 8.4E-10 87.4 14.5 147 550-704 93-244 (466)
234 COG2807 CynX Cyanate permease 98.1 0.00031 6.7E-09 77.1 20.6 164 19-184 221-386 (395)
235 TIGR00788 fbt folate/biopterin 98.1 3.3E-05 7.2E-10 87.5 13.9 120 34-153 281-410 (468)
236 PF06779 DUF1228: Protein of u 98.1 2.8E-05 6.1E-10 68.6 9.7 81 18-98 4-84 (85)
237 KOG3098 Uncharacterized conser 98.1 0.00081 1.7E-08 76.4 23.9 105 47-152 56-160 (461)
238 TIGR01301 GPH_sucrose GPH fami 98.1 0.00033 7.2E-09 80.1 21.0 143 45-187 309-475 (477)
239 TIGR00806 rfc RFC reduced fola 98.1 0.00012 2.7E-09 83.3 17.1 120 550-681 82-203 (511)
240 KOG1330 Sugar transporter/spin 98.0 1.2E-06 2.7E-11 97.9 1.0 127 550-686 88-215 (493)
241 KOG3764 Vesicular amine transp 98.0 1.1E-05 2.3E-10 89.1 7.6 128 550-687 126-254 (464)
242 PF05978 UNC-93: Ion channel r 98.0 0.00028 6.1E-09 69.1 16.7 108 45-153 41-148 (156)
243 KOG3762 Predicted transporter 98.0 8E-05 1.7E-09 84.9 14.4 119 550-678 426-545 (618)
244 KOG3762 Predicted transporter 98.0 5.2E-05 1.1E-09 86.4 11.6 160 18-179 383-543 (618)
245 PF00083 Sugar_tr: Sugar (and 97.9 4.1E-08 8.9E-13 108.5 -14.3 164 26-199 273-446 (451)
246 KOG0252 Inorganic phosphate tr 97.9 1E-05 2.2E-10 90.7 4.3 178 6-186 304-500 (538)
247 KOG1237 H+/oligopeptide sympor 97.8 0.0071 1.5E-07 70.8 27.1 160 25-189 57-248 (571)
248 PF03209 PUCC: PUCC protein; 97.8 0.0017 3.7E-08 72.4 20.9 150 30-179 233-394 (403)
249 PF12832 MFS_1_like: MFS_1 lik 97.7 0.00026 5.6E-09 61.3 9.9 71 11-81 5-75 (77)
250 COG3104 PTR2 Dipeptide/tripept 97.7 0.0002 4.4E-09 81.2 10.4 123 550-680 81-206 (498)
251 COG0738 FucP Fucose permease [ 97.6 0.0034 7.3E-08 69.9 18.8 162 10-176 240-402 (422)
252 KOG2816 Predicted transporter 97.6 0.00031 6.8E-09 80.0 11.0 127 550-689 82-208 (463)
253 TIGR00769 AAA ADP/ATP carrier 97.6 0.26 5.5E-06 56.7 41.4 143 8-154 9-189 (472)
254 PF06963 FPN1: Ferroportin1 (F 97.6 0.16 3.5E-06 57.7 31.6 174 8-183 4-200 (432)
255 PF06813 Nodulin-like: Nodulin 97.5 0.0012 2.6E-08 69.5 13.3 138 532-675 17-176 (250)
256 KOG2533 Permease of the major 97.5 0.00089 1.9E-08 76.9 13.2 159 8-168 275-441 (495)
257 KOG4332 Predicted sugar transp 97.4 0.0025 5.5E-08 67.6 14.0 92 31-123 62-154 (454)
258 KOG3574 Acetyl-CoA transporter 96.9 0.048 1E-06 60.7 18.1 141 8-151 33-190 (510)
259 PRK03612 spermidine synthase; 96.8 0.14 3.1E-06 59.4 21.9 152 31-184 40-198 (521)
260 KOG2563 Permease of the major 96.5 0.033 7.1E-07 63.1 13.1 136 550-687 99-242 (480)
261 PF00854 PTR2: POT family; In 96.4 0.017 3.6E-07 63.3 10.3 105 72-178 2-118 (372)
262 PF06963 FPN1: Ferroportin1 (F 96.3 0.13 2.9E-06 58.3 16.9 145 9-153 261-415 (432)
263 PF05631 DUF791: Protein of un 96.2 0.11 2.3E-06 57.4 15.2 125 550-686 89-222 (354)
264 PF03092 BT1: BT1 family; Int 96.1 0.046 1E-06 61.7 12.0 129 550-686 44-181 (433)
265 TIGR00926 2A1704 Peptide:H+ sy 96.1 0.11 2.4E-06 61.9 15.3 126 550-678 43-180 (654)
266 KOG3810 Micronutrient transpor 96.0 0.14 3E-06 56.6 14.3 135 51-187 52-186 (433)
267 TIGR00939 2a57 Equilibrative N 95.9 4.2 9E-05 46.4 29.0 53 93-150 105-157 (437)
268 PF13000 Acatn: Acetyl-coenzym 95.6 0.54 1.2E-05 54.2 17.7 144 10-153 4-177 (544)
269 PF02487 CLN3: CLN3 protein; 95.3 0.3 6.4E-06 55.0 14.2 116 36-153 276-394 (402)
270 KOG3098 Uncharacterized conser 95.0 1.6 3.5E-05 50.1 19.2 95 51-146 289-404 (461)
271 PF03219 TLC: TLC ATP/ADP tran 94.6 12 0.00025 43.6 36.4 143 8-154 26-204 (491)
272 COG0477 ProP Permeases of the 94.4 0.37 8.1E-06 47.4 10.8 112 550-669 59-174 (338)
273 KOG2325 Predicted transporter/ 93.8 0.5 1.1E-05 54.4 11.7 129 550-684 91-233 (488)
274 PF00854 PTR2: POT family; In 93.5 0.44 9.4E-06 52.2 10.3 118 561-680 2-123 (372)
275 KOG3880 Predicted small molecu 91.1 3.1 6.7E-05 45.7 12.6 139 43-186 64-202 (409)
276 COG3202 ATP/ADP translocase [E 91.0 16 0.00034 42.4 18.8 179 8-190 29-255 (509)
277 TIGR00769 AAA ADP/ATP carrier 90.7 4.7 0.0001 46.5 14.5 105 550-654 64-190 (472)
278 PF01770 Folate_carrier: Reduc 90.6 5.5 0.00012 45.2 14.6 97 550-657 61-157 (412)
279 PF05978 UNC-93: Ion channel r 90.2 4.1 9E-05 40.0 11.7 93 550-653 57-149 (156)
280 PRK03612 spermidine synthase; 89.9 10 0.00022 44.3 16.6 52 627-678 143-195 (521)
281 COG4262 Predicted spermidine s 89.3 20 0.00043 40.2 16.9 151 30-183 31-191 (508)
282 PF07672 MFS_Mycoplasma: Mycop 88.4 12 0.00026 40.1 14.3 57 126-182 2-61 (267)
283 PF12832 MFS_1_like: MFS_1 lik 82.5 2.7 5.8E-05 36.4 5.1 45 525-569 8-74 (77)
284 PF03137 OATP: Organic Anion T 79.4 0.6 1.3E-05 54.6 0.0 133 8-140 307-497 (539)
285 KOG1479 Nucleoside transporter 79.0 44 0.00095 38.0 14.4 114 11-126 23-148 (406)
286 PF03219 TLC: TLC ATP/ADP tran 78.1 62 0.0013 37.7 15.8 105 550-654 79-205 (491)
287 TIGR00939 2a57 Equilibrative N 77.3 27 0.00058 39.9 12.4 106 45-151 311-429 (437)
288 KOG0637 Sucrose transporter an 75.9 6.4 0.00014 45.3 6.8 77 43-119 334-410 (498)
289 KOG1237 H+/oligopeptide sympor 75.3 54 0.0012 38.9 14.5 129 550-678 93-243 (571)
290 KOG3574 Acetyl-CoA transporter 73.5 15 0.00032 41.7 8.6 132 550-682 83-238 (510)
291 KOG4332 Predicted sugar transp 72.2 49 0.0011 36.2 11.8 132 43-176 284-424 (454)
292 PRK10263 DNA translocase FtsK; 64.1 52 0.0011 42.5 11.6 33 640-672 142-174 (1355)
293 KOG3880 Predicted small molecu 62.2 26 0.00057 38.8 7.5 109 41-151 288-399 (409)
294 KOG3097 Predicted membrane pro 60.6 47 0.001 37.1 9.2 74 50-124 67-140 (390)
295 KOG3626 Organic anion transpor 55.2 42 0.0009 41.0 8.4 75 8-82 394-472 (735)
296 TIGR03173 pbuX xanthine permea 51.4 4E+02 0.0086 29.9 15.7 97 32-129 19-116 (406)
297 PF10225 DUF2215: Uncharacteri 51.3 2E+02 0.0044 30.5 12.0 61 83-145 19-81 (249)
298 KOG3810 Micronutrient transpor 49.6 86 0.0019 35.4 9.0 96 43-138 273-370 (433)
299 KOG4812 Golgi-associated prote 46.2 1.9E+02 0.0042 30.7 10.4 82 449-542 106-187 (262)
300 PF01733 Nucleoside_tran: Nucl 45.3 8.5 0.00018 41.5 0.6 105 46-150 187-304 (309)
301 TIGR00801 ncs2 uracil-xanthine 44.7 5.1E+02 0.011 29.3 17.5 120 8-131 7-131 (415)
302 PF06912 DUF1275: Protein of u 43.9 3.5E+02 0.0077 27.2 20.3 39 46-84 51-92 (209)
303 PF11947 DUF3464: Protein of u 42.6 65 0.0014 31.9 6.2 89 551-643 55-144 (153)
304 PF08507 COPI_assoc: COPI asso 42.5 3.1E+02 0.0067 26.1 11.5 9 617-625 48-56 (136)
305 PF12805 FUSC-like: FUSC-like 42.2 2.7E+02 0.0057 29.7 11.4 38 75-112 3-41 (284)
306 COG5336 Uncharacterized protei 39.5 95 0.0021 29.1 6.3 37 45-81 46-83 (116)
307 KOG1479 Nucleoside transporter 38.6 1.6E+02 0.0035 33.6 9.4 106 44-149 285-398 (406)
308 PF05297 Herpes_LMP1: Herpesvi 38.0 11 0.00023 40.7 0.0 28 550-577 65-92 (381)
309 PF12805 FUSC-like: FUSC-like 37.8 2.3E+02 0.005 30.2 10.1 18 627-644 46-63 (284)
310 COG3619 Predicted membrane pro 37.4 5.2E+02 0.011 27.2 16.7 101 5-105 11-126 (226)
311 COG2233 UraA Xanthine/uracil p 34.6 6E+02 0.013 29.5 13.1 124 7-132 17-143 (451)
312 COG1230 CzcD Co/Zn/Cd efflux s 34.1 6.6E+02 0.014 27.5 14.5 82 2-89 21-105 (296)
313 PF05313 Pox_P21: Poxvirus P21 33.9 2.8E+02 0.006 28.3 9.0 50 622-678 110-159 (189)
314 PRK12438 hypothetical protein; 32.2 7E+02 0.015 31.9 14.0 18 159-176 281-298 (991)
315 PF11947 DUF3464: Protein of u 32.1 1.6E+02 0.0035 29.2 7.0 52 92-146 95-146 (153)
316 TIGR01666 YCCS hypothetical me 31.3 6.7E+02 0.015 30.8 13.6 52 61-112 43-99 (704)
317 PRK10263 DNA translocase FtsK; 30.3 4.9E+02 0.011 34.2 12.4 20 50-69 61-80 (1355)
318 PF07760 DUF1616: Protein of u 30.2 5.6E+02 0.012 27.5 11.6 51 97-150 22-72 (287)
319 TIGR01667 YCCS_YHJK integral m 29.5 8.5E+02 0.018 29.9 14.1 54 60-113 42-100 (701)
320 COG2274 SunT ABC-type bacterio 29.1 1.2E+03 0.025 28.8 15.3 72 620-692 243-326 (709)
321 KOG3817 Uncharacterized conser 28.4 3E+02 0.0064 31.0 8.9 105 519-629 144-253 (452)
322 PF07672 MFS_Mycoplasma: Mycop 27.5 5.8E+02 0.013 27.6 10.8 79 44-122 144-232 (267)
323 PTZ00265 multidrug resistance 26.6 1.5E+03 0.032 30.3 16.5 16 159-174 195-210 (1466)
324 KOG4255 Uncharacterized conser 26.0 1E+03 0.022 27.0 13.2 101 28-129 33-147 (439)
325 PF02632 BioY: BioY family; I 24.6 3.6E+02 0.0077 26.4 8.0 26 47-72 59-84 (148)
326 COG1268 BioY Uncharacterized c 24.1 3.4E+02 0.0074 27.7 7.9 23 48-70 89-111 (184)
327 TIGR00836 amt ammonium transpo 23.9 7.3E+02 0.016 28.3 11.5 49 102-150 283-331 (403)
328 COG5336 Uncharacterized protei 23.5 3.2E+02 0.0069 25.8 6.8 35 623-657 36-70 (116)
329 KOG1277 Endosomal membrane pro 23.1 4.7E+02 0.01 30.6 9.4 30 43-72 325-358 (593)
330 COG4769 Predicted membrane pro 22.7 1.9E+02 0.0042 29.1 5.7 54 50-109 82-135 (181)
331 PF06570 DUF1129: Protein of u 22.6 8.2E+02 0.018 24.8 13.1 18 104-121 119-136 (206)
332 TIGR00918 2A060602 The Eukaryo 20.8 2E+03 0.043 28.6 17.1 21 101-121 1026-1046(1145)
333 PF13000 Acatn: Acetyl-coenzym 20.2 1.4E+03 0.03 27.3 12.7 49 96-144 407-455 (544)
334 PF00860 Xan_ur_permease: Perm 20.2 2.8E+02 0.0062 30.9 7.3 93 34-130 27-126 (389)
335 KOG2887 Membrane protein invol 20.0 9.3E+02 0.02 24.5 10.3 78 593-678 79-156 (175)
No 1
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=100.00 E-value=2.6e-41 Score=377.83 Aligned_cols=424 Identities=31% Similarity=0.513 Sum_probs=357.2
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--------HHcC--CCh----hHHHHHHHHHHHHHHHHHHHHHHHhhhh
Q 005249 3 GAALVAIAATIGNFLQGWDNATIAGAIVYIK--------KDLN--LGT----TVEGLVVAMSLIGATAITTCSGPISDWL 68 (706)
Q Consensus 3 r~~liliil~L~~fl~gl~~~iis~~lp~I~--------q~fG--LS~----s~igLl~S~~~Ig~~Igsl~~G~LaDR~ 68 (706)
+..++.+.++++.+-.+|....+++..+.+. +.+| ++. ...+.+.+++.+|.++|+++.+.++||+
T Consensus 8 ~L~~~~~~~~~gsf~~Gy~~~~iNap~~~i~~f~n~t~~~r~g~~~s~~~~~~lwS~~vs~f~iG~~~Gs~~~~~la~~~ 87 (485)
T KOG0569|consen 8 RLLLAVIVATLGSFQFGYNIGVVNAPQELIKSFINETLIERYGLPLSDSTLDLLWSLIVSIFFIGGMIGSFSSGLLADRF 87 (485)
T ss_pred HHHHHHHHHHHhchhhhhhheecCchHHHHHHHHHHHHHHhcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 3445566666777778888888777655433 3456 444 3466788999999999999999999999
Q ss_pred CChHHHHHHHHHHHHHHHHHHh---hhhHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCcchhhHHhHHHHHHHHHHHHH
Q 005249 69 GRRPMLILSSVLYFVSGLVMLW---SPNVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFL 145 (706)
Q Consensus 69 GRRrvLlig~iL~aIgsll~a~---a~s~~lLli~R~L~GIg~G~~~~~~~a~IsE~fP~k~Rg~a~Gi~~ag~~LG~al 145 (706)
|||..+.++.++..++.+++.+ .+++.+++++|++.|+..|......+-|+.|..|++.||....+.+.+..+|.++
T Consensus 88 GRK~~l~~~~~l~~~~~~~~~~s~~~~~~e~li~GR~i~Gl~~gl~~~~~pmyl~E~sP~~~RG~~g~~~~~~~~~g~ll 167 (485)
T KOG0569|consen 88 GRKNALLLSNLLAVLAALLMGLSKSAPSFEMLILGRLIVGLACGLSTGLVPMYLTEISPKNLRGALGTLLQIGVVIGILL 167 (485)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHhHHHHHHHHHHHhhcChhhhccHHHHHHHHHHHHHHHH
Confidence 9999999999888888877776 4789999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHhhccCCchhhhc-ccchHHHHHHHHHhhccccchHHHHHHHHhhc
Q 005249 146 AYCMVFGMSLLASPSWRLMLGVLSIPALLYFAFAVFFLPESPRWLVS-KGKMLEAKQVLQRLRGREDVSGEMALLVEGLG 224 (706)
Q Consensus 146 g~ll~~~l~l~~~~GWR~~FlI~ail~LV~~ll~~lflpEsp~~l~~-k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (706)
+..........+...|.+.+.+..+++++.+ +...++|||||||.. +++.+||++.++.+++.+|.+.+....
T Consensus 168 ~~~~~l~~ilGt~~~W~~l~~~~~i~~~~~l-~~l~~~PESPk~Ll~~k~~~~~A~~sl~~y~G~~~~~~~~e~~----- 241 (485)
T KOG0569|consen 168 GQVLGLPSLLGTEDLWPYLLAFPLIPALLQL-ALLPFLPESPKYLLIKKGDEEEARKALKFYRGKEDVEAEIEEM----- 241 (485)
T ss_pred HHHHccHHhcCCCcchHHHHHHHHHHHHHHH-HHHhcCCCCcchHHHHcCCHHHHHHHHHHHhCCCcchhHHHHH-----
Confidence 9777766666677789999999888888755 457899999999988 899999999999999887543222100
Q ss_pred cCCCcchhhhhcCCCCCCCCCCCCchhhhhhhhcCCCCCcccccccccccchhhhHhhhccccCCCCCCCCccccccccc
Q 005249 225 IGGETSIEEYIIGPGDELADGEEPTDEKDKIRLYGPEEGLSWVAKPVTGQSSLALVSRQGSLANQSVPLMDPLVTLFGSV 304 (706)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (706)
T Consensus 242 -------------------------------------------------------------------------------- 241 (485)
T KOG0569|consen 242 -------------------------------------------------------------------------------- 241 (485)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cccCCCCCCCCccccCCCCCCccccccccccCCcchhhhhhccCCccccccCCCCCCCCCCccccccccccccccCCCCC
Q 005249 305 HEKLPESGSMRSTLFPTFGSMFSTAEHHVKHDHWDEESLQREGEDHASDIAGADSDDNLHSPLISRQTTSMEKDMAAPPS 384 (706)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 384 (706)
++| -
T Consensus 242 ----------------------------------~~e-----~------------------------------------- 245 (485)
T KOG0569|consen 242 ----------------------------------LRE-----I------------------------------------- 245 (485)
T ss_pred ----------------------------------HHH-----H-------------------------------------
Confidence 000 0
Q ss_pred CCcccccccccccccCCCccccccccCCCcccccchhhcccCCCcccCCccceeecccCCCCCCCCcccccCCCCCCccc
Q 005249 385 HGSILSMRRHSSLMQGSGEAVGSTGIGGGWQLAWKWTEREGEDGKKEGGFKRIYLHQEGVPGSRRGSLVSVPGYDVPEEG 464 (706)
Q Consensus 385 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 464 (706)
+
T Consensus 246 -------------------------------------~------------------------------------------ 246 (485)
T KOG0569|consen 246 -------------------------------------E------------------------------------------ 246 (485)
T ss_pred -------------------------------------H------------------------------------------
Confidence 0
Q ss_pred hHHHHHHHhhchhhhhhhhhccCCCCCCcCCCCccccCCCchHHHHhh-hhhhHHHHHHHHHHHHhhhhhhhhHhcHHHH
Q 005249 465 EYIQAAALVSQPALYSKELMDQHPVGPAMVHPSETASKGPSWAALLEA-GVKRALLVGVGIQILQQFSGINGVLYYTPQI 543 (706)
Q Consensus 465 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 543 (706)
+.+.++++..++.++++. ..++.+.+++.+.++++++|++.+.+|...+
T Consensus 247 ------------------------------~~~~~~~~~~sl~~~~~~~~lR~~~~i~~~v~~~qq~sGi~ai~~Yst~i 296 (485)
T KOG0569|consen 247 ------------------------------EEELEKKKQISLRQLLKNPTLRRPLLIGIVVSFAQQFSGINAIFFYSTSI 296 (485)
T ss_pred ------------------------------HhccccccCCcHHHHhcCcchhHHHHHHHHHHHHHHhcCcceeHHHHHHH
Confidence 000001234566667744 5677889999999999999999999999999
Q ss_pred HHhhhh----------------------HHHHHhhhcchHHHHhHHHHHHHHHHHHHHHhhhhhhhhhHHHHHHHHHHHH
Q 005249 544 LEQAGV----------------------AMKLMDVAGRRKLLLTTIPVLIVSLIILVISETLQLISPVLKAGISTACVII 601 (706)
Q Consensus 544 ~~~~g~----------------------~~~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 601 (706)
+.++|+ +.+++||+|||++++++..++.++.+++.+.....+....+..+..++++++
T Consensus 297 ~~~aG~~~~~a~~an~~~g~v~~~~t~~~~~lid~~gRRpLll~~~~~~~~~~~~~~~~~~l~~~~~~~~~y~~i~~~~~ 376 (485)
T KOG0569|consen 297 FKTAGFTPEEAQYANLGIGIVNLLSTLVSPFLIDRLGRRPLLLISLSLMAVALLLMSIALFLSNSFGSWLSYLCIAAIFL 376 (485)
T ss_pred HHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHH
Confidence 999887 8999999999999999999999999999888777644444556677899999
Q ss_pred HHHHhhcccccchhhhhcccCCcchhhhHHHHHHHHHHHHHHHHHhHHHHHHHhhchhhHHHHHHHHHHHHHHHHHhccc
Q 005249 602 YFCCFVAAYGPIPNILCAEIFPTKVRGICIAICAMAYWICDIIVTYTLPVMLSSIGLAGAFGVYAVVCFISWVFVFLRVP 681 (706)
Q Consensus 602 ~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 681 (706)
|.+.|+.|.+|+++.+.+|+||++.|+.+.+++.+++|++.++..++++.+.+.+|- ..|+++++.++++.++.++++|
T Consensus 377 ~~~~f~~G~gpi~~fi~aELf~~~~R~aa~s~~~~~~w~~~fiv~~~fp~l~~~~g~-~~filF~i~~~~~~i~~~~~lP 455 (485)
T KOG0569|consen 377 FIISFAIGPGPIPWFIGAELFPQSARSAAQSVATAVNWLSNFIVGFAFPPLQNVIGP-YVFILFVIPLAIFLIYLYRYLP 455 (485)
T ss_pred HHHhhhcCCCchhHHHHHHhCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-hhhHHHHHHHHHHHHHHHHhCc
Confidence 999999999999999999999999999999999999999999999999999999996 6899999999999999999999
Q ss_pred CCCCCChHHHHHHHHcC
Q 005249 682 ETKGMPLEVITEFFAVG 698 (706)
Q Consensus 682 et~~~~~~~~~~~~~~~ 698 (706)
|||||+.+||.+.++++
T Consensus 456 ETkgr~~~eI~~~~~~~ 472 (485)
T KOG0569|consen 456 ETKGRTPYEIIEELEKR 472 (485)
T ss_pred ccCCCCHHHHHHHHHhC
Confidence 99999999999999877
No 2
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=100.00 E-value=3e-38 Score=357.15 Aligned_cols=424 Identities=36% Similarity=0.700 Sum_probs=350.2
Q ss_pred HHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHc-----CCCh--hHHHHHHHHHHHHHHHHHHHHHHHhhhhCChHHHH
Q 005249 5 ALVAIAATIGNFLQGWD--NATIAGAIVYIKKDL-----NLGT--TVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLI 75 (706)
Q Consensus 5 ~liliil~L~~fl~gl~--~~iis~~lp~I~q~f-----GLS~--s~igLl~S~~~Ig~~Igsl~~G~LaDR~GRRrvLl 75 (706)
.+..+...++.+..+++ ....++....+.++. ..+. .+.+++.+.+.++.+++++++|+++|++|||+.++
T Consensus 44 ~~~~~~~~~~~~~fg~~g~~g~~s~~~~~~~~~~~~~~~~~~~~~~~~s~~~s~~~lga~~g~l~~g~l~d~~GRk~~l~ 123 (513)
T KOG0254|consen 44 ILLALVAALGGLLFGYDGDIGGISGALDFLQRFASLYDLSTGEYSVRQGLLTSILNLGALVGSLLAGRLGDRIGRKKTLL 123 (513)
T ss_pred HHHHHHHHHHHHHhCcccccccchhhHHHHHhcccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHH
Confidence 34455566666666665 455566666666643 2222 35589999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCcchhhHHhHHHHHHHHHHHHHHHHHHHHHHH
Q 005249 76 LSSVLYFVSGLVMLWSPNVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSL 155 (706)
Q Consensus 76 ig~iL~aIgsll~a~a~s~~lLli~R~L~GIg~G~~~~~~~a~IsE~fP~k~Rg~a~Gi~~ag~~LG~alg~ll~~~l~l 155 (706)
++.+++.++.+++++++++++++++|++.|+|.|+...+.+.|++|..|++.||...++.+.+..+|..++.........
T Consensus 124 ~~~~~~~iG~ii~~~a~~~~~l~~GR~l~G~g~G~~~~~~piy~sEiap~~~RG~l~~~~~l~~~~Gi~~~~~~~~~~~~ 203 (513)
T KOG0254|consen 124 LAVVLFLIGAIIIALAPSWYQLIVGRILTGLGVGGASVLAPVYISEIAPAHIRGTLVSLYQLFITIGILLGYCINYGTSK 203 (513)
T ss_pred HHHHHHHHHHHHHHHhhhHHHHHHHHHHhccchhhhhhcchhhHhhcCChhhhHHHHHHHHHHHHHHHHHHHHHhhhhcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999555444322
Q ss_pred hccchhhHHHHHHHHHHHHHHHHHHhhccCCchhhhcccchHHHHHHHHHhhcc--ccchHHHHHHHHhhccCCCcchhh
Q 005249 156 LASPSWRLMLGVLSIPALLYFAFAVFFLPESPRWLVSKGKMLEAKQVLQRLRGR--EDVSGEMALLVEGLGIGGETSIEE 233 (706)
Q Consensus 156 ~~~~GWR~~FlI~ail~LV~~ll~~lflpEsp~~l~~k~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 233 (706)
. ..+||..+.+..+++++.++. .+++||+|+|+..+++..++++.+.++++. .+...+...+..
T Consensus 204 ~-~~~Wr~~~~~~~i~~~~~~~~-~~~~pesp~~L~~~g~~~~a~~~l~~l~g~~~~~~~~~~~~~~~------------ 269 (513)
T KOG0254|consen 204 V-YAGWRIPLGLALIPAVILALG-MLFLPESPRWLIEKGRLEEAKRSLKRLRGLSPEDVEVELELLKI------------ 269 (513)
T ss_pred C-CccHHHHHHHHHHHHHHHHHH-HHhCCCChHHHHHcCChHHHHHHHHHHhCCCCcchHHHHHHHHH------------
Confidence 2 158999999999988887766 899999999999999999999999998873 222222111100
Q ss_pred hhcCCCCCCCCCCCCchhhhhhhhcCCCCCcccccccccccchhhhHhhhccccCCCCCCCCccccccccccccCCCCCC
Q 005249 234 YIIGPGDELADGEEPTDEKDKIRLYGPEEGLSWVAKPVTGQSSLALVSRQGSLANQSVPLMDPLVTLFGSVHEKLPESGS 313 (706)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (706)
+.
T Consensus 270 -------------------~~----------------------------------------------------------- 271 (513)
T KOG0254|consen 270 -------------------KL----------------------------------------------------------- 271 (513)
T ss_pred -------------------HH-----------------------------------------------------------
Confidence 00
Q ss_pred CCccccCCCCCCccccccccccCCcchhhhhhccCCccccccCCCCCCCCCCccccccccccccccCCCCCCCccccccc
Q 005249 314 MRSTLFPTFGSMFSTAEHHVKHDHWDEESLQREGEDHASDIAGADSDDNLHSPLISRQTTSMEKDMAAPPSHGSILSMRR 393 (706)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 393 (706)
T Consensus 272 -------------------------------------------------------------------------------- 271 (513)
T KOG0254|consen 272 -------------------------------------------------------------------------------- 271 (513)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccccccCCCccccccccCCCcccccchhhcccCCCcccCCccceeecccCCCCCCCCcccccCCCCCCccchHHHHHHHh
Q 005249 394 HSSLMQGSGEAVGSTGIGGGWQLAWKWTEREGEDGKKEGGFKRIYLHQEGVPGSRRGSLVSVPGYDVPEEGEYIQAAALV 473 (706)
Q Consensus 394 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~i 473 (706)
.
T Consensus 272 -------------------------------------------------------------------------------~ 272 (513)
T KOG0254|consen 272 -------------------------------------------------------------------------------L 272 (513)
T ss_pred -------------------------------------------------------------------------------H
Confidence 0
Q ss_pred hchhhhhhhhhccCCCCCCcCCCCccccCCCchHHHHhhhhhhHHHHHHHHHHHHhhhhhhhhHhcHHHHHHhhhh----
Q 005249 474 SQPALYSKELMDQHPVGPAMVHPSETASKGPSWAALLEAGVKRALLVGVGIQILQQFSGINGVLYYTPQILEQAGV---- 549 (706)
Q Consensus 474 ~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~---- 549 (706)
.+ .....++..+.+++.+..++++++++.++.++|++|++.+.+|.+++++..|.
T Consensus 273 ~~---------------------~~~~~~~~~~~~l~~~~~~~~~~i~~~l~~fqq~tG~~~~~~Y~~~if~~~g~~~~~ 331 (513)
T KOG0254|consen 273 VE---------------------AEVAEGKASWGELFSPKVRKRLIIGLLLQLFQQLTGINYVFYYSTTIFKSAGLKSDT 331 (513)
T ss_pred Hh---------------------hhcccccccHHHhcCcchHHHHHHHHHHHHHHHHhCCceEEeehHHHHHhcCCCCch
Confidence 00 00000112466666677899999999999999999999999999999998765
Q ss_pred -----------------HHHHHhhhcchHHHHhHHHHHHHHHHHHHHHhhhhhh---hhhHHHHHHHHHHHHHHHHhhcc
Q 005249 550 -----------------AMKLMDVAGRRKLLLTTIPVLIVSLIILVISETLQLI---SPVLKAGISTACVIIYFCCFVAA 609 (706)
Q Consensus 550 -----------------~~~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~ 609 (706)
+.+++||+|||++++.+...+++++++++........ ......++.+.+.++|..+|..+
T Consensus 332 ~~~~~~~~~v~~~~t~~~~~lvd~~gRr~lll~s~~~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~f~~g 411 (513)
T KOG0254|consen 332 FLASIILGVVNFLGTLVATYLVDRFGRRKLLLFGAAGMSICLVILAVVGVFALYYPNSSKGAGWLAIVFLCLFIFSFAIG 411 (513)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHhHHHHHHHHHHHHHHHHHhccCCCcccchhHHHHHHHHHHHHHHhcc
Confidence 6799999999999999999999999998887666532 23345678889999999999999
Q ss_pred cccchhhhhcccCCcchhhhHHHHHHHHHHHHHHHHHhHHHHHHHhhchhhHHHHHHHHHHHHHH-HHHhcccCCCCCCh
Q 005249 610 YGPIPNILCAEIFPTKVRGICIAICAMAYWICDIIVTYTLPVMLSSIGLAGAFGVYAVVCFISWV-FVFLRVPETKGMPL 688 (706)
Q Consensus 610 ~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~-~~~~~~~et~~~~~ 688 (706)
++|++|.+..|++|.+.|+.+.+++..+.|+...+....++.+....+....|.++++++.+.++ ++++++|||||+++
T Consensus 412 ~g~v~w~~~sEifp~~~r~~~~s~~~~~n~~~~~~v~~~~~~~~~~~~~~~~f~~f~~~~~~~~~~fv~~~~pETkg~sl 491 (513)
T KOG0254|consen 412 WGPVPWVIVSEIFPLRLRSKGASLAVAVNWLWNFLISFFFPFITEALGIGGTFGYFGGICLLSLIIFVFFFVPETKGLTL 491 (513)
T ss_pred cccchhhhhhccCcHhHHhhhHHHHHHHHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHheEEcccCCCCcH
Confidence 99999999999999999999999999999999999999999998887756689999999998888 89999999999999
Q ss_pred HHHHHHHHcCcc
Q 005249 689 EVITEFFAVGAR 700 (706)
Q Consensus 689 ~~~~~~~~~~~~ 700 (706)
|++++.|.++..
T Consensus 492 eei~~~~~~~~~ 503 (513)
T KOG0254|consen 492 EEINELFEEGIK 503 (513)
T ss_pred HHHHHHHHcCCc
Confidence 999999987754
No 3
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=100.00 E-value=6.2e-37 Score=344.53 Aligned_cols=203 Identities=22% Similarity=0.297 Sum_probs=170.8
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-----CCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhCChHHHHH
Q 005249 2 NGAALVAIAATIGNFLQGWDNATIAGAIVYIKKDL-----NLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLIL 76 (706)
Q Consensus 2 ~r~~liliil~L~~fl~gl~~~iis~~lp~I~q~f-----GLS~s~igLl~S~~~Ig~~Igsl~~G~LaDR~GRRrvLli 76 (706)
++.+.++.+++++.+.++++...++...|.+..++ ..+..+.+++.+.+.++++++++++|+++||+|||+++.+
T Consensus 12 ~~~~~~~~~~~~~~~~~g~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~ig~~~~g~l~d~~Grr~~~~~ 91 (502)
T TIGR00887 12 WQHFRAIVIAGVGFFTDSYDLFCISLVTKMLGYVYYHGKGPLPSSVSAAVNGSASIGTLAGQLFFGWLADKLGRKRVYGM 91 (502)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHH
Confidence 45667788899999999999999999999887753 3556678899999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhhh------HHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCcchhhHHhHHHHHHHHHHHHHHHHHH
Q 005249 77 SSVLYFVSGLVMLWSPN------VYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMV 150 (706)
Q Consensus 77 g~iL~aIgsll~a~a~s------~~lLli~R~L~GIg~G~~~~~~~a~IsE~fP~k~Rg~a~Gi~~ag~~LG~alg~ll~ 150 (706)
+.++++++.++++++++ ++.++++|++.|++.|+..+....+++|++|+++|++++++.+.+..+|.++++.+.
T Consensus 92 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~g~~~g~~~~ 171 (502)
T TIGR00887 92 ELIIMIIATVASGLSPGSSPKSVMATLCFWRFWLGVGIGGDYPLSAIITSEFATKKWRGAMMAAVFAMQGFGILAGAIVA 171 (502)
T ss_pred HHHHHHHHHHHHHHccCcccchHHHHHHHHHHHHHHHHhhhhHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999888765 788999999999999999999999999999999999999999999999999987665
Q ss_pred HHHHH---------------------hccchhhHHHHHHHHHHHHHHHHHHhhccCCchhhhcccchHH-HHHHHHH
Q 005249 151 FGMSL---------------------LASPSWRLMLGVLSIPALLYFAFAVFFLPESPRWLVSKGKMLE-AKQVLQR 205 (706)
Q Consensus 151 ~~l~l---------------------~~~~GWR~~FlI~ail~LV~~ll~~lflpEsp~~l~~k~~~~~-~~~~~~~ 205 (706)
..... ...++||++|.+.++++++.+ +..+++||+|||+..+++.++ +++.+.+
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~WR~~~~~~~ip~~i~~-~~~~~lpESpr~l~~~~~~~~~a~~~~~~ 247 (502)
T TIGR00887 172 LIVLAGFKHSLEAAADEASCTGSCVPAVDYMWRILIGFGAVPALLAL-YFRLTIPETPRYTADVAKDVEQAASDMSA 247 (502)
T ss_pred HHHHHHhccccccccccccccccccchhcccHHHHHHHHHHHHHHHH-HHHHhCCCCHHHHHHhCcchHHHHHHHHH
Confidence 44321 112479999988777776644 456889999999988777643 4444443
No 4
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=100.00 E-value=5.2e-36 Score=331.37 Aligned_cols=414 Identities=31% Similarity=0.558 Sum_probs=312.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc--------CCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhCChHHHHH
Q 005249 5 ALVAIAATIGNFLQGWDNATIAGAIVYIKKDL--------NLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLIL 76 (706)
Q Consensus 5 ~liliil~L~~fl~gl~~~iis~~lp~I~q~f--------GLS~s~igLl~S~~~Ig~~Igsl~~G~LaDR~GRRrvLli 76 (706)
..++++++++.+.++++...+++..|.+.+++ +++..+.+++.+++.++.+++++++|+++||+|||+++++
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~ig~~~~~~~~G~l~dr~Grr~~~~~ 90 (479)
T PRK10077 11 FSITLVATLGGLLFGYDTAVISGTVESLNTVFVAPQNLSESAANSLLGFCVASALIGCIIGGALGGYCSNRFGRRDSLKI 90 (479)
T ss_pred HHHHHHHHHHHHhcCcccceehHhHHHHHHHhcccccccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHH
Confidence 45667777888999999999999999998887 8899999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhh------------hhHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCcchhhHHhHHHHHHHHHHHH
Q 005249 77 SSVLYFVSGLVMLWS------------PNVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMF 144 (706)
Q Consensus 77 g~iL~aIgsll~a~a------------~s~~lLli~R~L~GIg~G~~~~~~~a~IsE~fP~k~Rg~a~Gi~~ag~~LG~a 144 (706)
+.++++++.++++++ +.++.++++|++.|++.|...+...++++|++|+++|++++++.+.+..+|.+
T Consensus 91 ~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~~G~~ 170 (479)
T PRK10077 91 AAVLFFISALGSAWPEFGFTSIGPDNTGYVPEFVIYRIIGGIGVGLASMLSPMYIAEIAPAHIRGKLVSFNQFAIIFGQL 170 (479)
T ss_pred HHHHHHHHHHHHHhhccccccccccchhHHHHHHHHHHHHhhhHhHHhhHHHHHHHhhCChhhhhHHHHHHHHHHHHHHH
Confidence 999999998887763 23567789999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHH------HhccchhhHHHHHHHHHHHHHHHHHHhhccCCchhhhcccchHHHHHHHHHhhccccchHHHHH
Q 005249 145 LAYCMVFGMS------LLASPSWRLMLGVLSIPALLYFAFAVFFLPESPRWLVSKGKMLEAKQVLQRLRGREDVSGEMAL 218 (706)
Q Consensus 145 lg~ll~~~l~------l~~~~GWR~~FlI~ail~LV~~ll~~lflpEsp~~l~~k~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (706)
++++...... .....+||+.|++.+++.++.. +..+++||+|+|+..+++.+++++..++..+..+......
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~gWr~~f~~~~~~~~~~~-~~~~~l~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~- 248 (479)
T PRK10077 171 VVYFVNYFIARSGDASWLNTDGWRYMFASEAIPALLFL-MLLYFVPETPRYLMSRGKQEQAEGILRKIMGNTLATQALQ- 248 (479)
T ss_pred HHHHHHHHHhccCcccccccCChHHHHHHHHHHHHHHH-HHHHcCCCCcHHHHHcCCHHHHHHHHHHHcCChhHHHHHH-
Confidence 8865543332 1234699999999888777755 4467789999998766665555444443322110000000
Q ss_pred HHHhhccCCCcchhhhhcCCCCCCCCCCCCchhhhhhhhcCCCCCcccccccccccchhhhHhhhccccCCCCCCCCccc
Q 005249 219 LVEGLGIGGETSIEEYIIGPGDELADGEEPTDEKDKIRLYGPEEGLSWVAKPVTGQSSLALVSRQGSLANQSVPLMDPLV 298 (706)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (706)
.++
T Consensus 249 -----------------------------------~~~------------------------------------------ 251 (479)
T PRK10077 249 -----------------------------------EIK------------------------------------------ 251 (479)
T ss_pred -----------------------------------HHH------------------------------------------
Confidence 000
Q ss_pred cccccccccCCCCCCCCccccCCCCCCccccccccccCCcchhhhhhccCCccccccCCCCCCCCCCccccccccccccc
Q 005249 299 TLFGSVHEKLPESGSMRSTLFPTFGSMFSTAEHHVKHDHWDEESLQREGEDHASDIAGADSDDNLHSPLISRQTTSMEKD 378 (706)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 378 (706)
+
T Consensus 252 ------------------------------------------~------------------------------------- 252 (479)
T PRK10077 252 ------------------------------------------H------------------------------------- 252 (479)
T ss_pred ------------------------------------------H-------------------------------------
Confidence 0
Q ss_pred cCCCCCCCcccccccccccccCCCccccccccCCCcccccchhhcccCCCcccCCccceeecccCCCCCCCCcccccCCC
Q 005249 379 MAAPPSHGSILSMRRHSSLMQGSGEAVGSTGIGGGWQLAWKWTEREGEDGKKEGGFKRIYLHQEGVPGSRRGSLVSVPGY 458 (706)
Q Consensus 379 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 458 (706)
T Consensus 253 -------------------------------------------------------------------------------- 252 (479)
T PRK10077 253 -------------------------------------------------------------------------------- 252 (479)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCccchHHHHHHHhhchhhhhhhhhccCCCCCCcCCCCccccCCCchHHHHhhhhhhHHHHHHHHHHHHhhhhhhhhHh
Q 005249 459 DVPEEGEYIQAAALVSQPALYSKELMDQHPVGPAMVHPSETASKGPSWAALLEAGVKRALLVGVGIQILQQFSGINGVLY 538 (706)
Q Consensus 459 ~~~~~g~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 538 (706)
..++ ++ .+ ...++. ......++++....++++.+++...+
T Consensus 253 --------------------~~~~---------------~~-~~---~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (479)
T PRK10077 253 --------------------SLDH---------------GR-KT---GGKLLM-FGVGVIVIGVMLSVFQQFVGINVVLY 292 (479)
T ss_pred --------------------HHHH---------------hh-hh---hhhhcc-hhHHHHHHHHHHHHHHHHhChhHHHH
Confidence 0000 00 00 000000 01123344445556666777777888
Q ss_pred cHHHHHHhhhh----------------------HHHHHhhhcchHHHHhHHHHHHHHHHHHHHHhhhhhhhhhHHHHHHH
Q 005249 539 YTPQILEQAGV----------------------AMKLMDVAGRRKLLLTTIPVLIVSLIILVISETLQLISPVLKAGIST 596 (706)
Q Consensus 539 ~~~~~~~~~g~----------------------~~~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 596 (706)
|.|.++++.|. .++++||+|||++++.+..+++++.+++....... ......+
T Consensus 293 ~~p~i~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~~~i~~~~~~~v~~~~l~~~~~~~-----~~~~~~~ 367 (479)
T PRK10077 293 YAPEIFKTLGASTDIALLQTIIVGVINLTFTVLAIMTVDKFGRKPLQIIGALGMAIGMFSLGTAFYTQ-----APGIVAL 367 (479)
T ss_pred HHHHHHHHcCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcChHHHHHhHHHHHHHHHHHHHHHhcC-----cccHHHH
Confidence 88888766542 77899999999999999888888877765432211 1112334
Q ss_pred HHHHHHHHHhhcccccchhhhhcccCCcchhhhHHHHHHHHHHHHHHHHHhHHHHHH------HhhchhhHHHHHHHHHH
Q 005249 597 ACVIIYFCCFVAAYGPIPNILCAEIFPTKVRGICIAICAMAYWICDIIVTYTLPVML------SSIGLAGAFGVYAVVCF 670 (706)
Q Consensus 597 ~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~~~~i~~~~~~~~~------~~~g~~~~~~~~~~~~~ 670 (706)
.+++++..++..++.|..+.+++|++|++.|+++.|+++++++++.+++++++|.+. +..++..+|.+++++++
T Consensus 368 ~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 447 (479)
T PRK10077 368 LSMLFYVAAFAMSWGPVCWVLLSEIFPNAIRGKALAIAVAAQWIANYFVSWTFPMMDKNSWLVAHFHNGFSYWIYGCMGV 447 (479)
T ss_pred HHHHHHHHHHhccccchhHHHhHhhCChhHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccchhhhccCccHHHHHHHHHH
Confidence 456666666666677888999999999999999999999999999999999888665 46788889999999999
Q ss_pred HHHHHHHhcccCCCCCChHHHHHHHHcCccc
Q 005249 671 ISWVFVFLRVPETKGMPLEVITEFFAVGARQ 701 (706)
Q Consensus 671 ~~~~~~~~~~~et~~~~~~~~~~~~~~~~~~ 701 (706)
++.++.+++.||||++++|+++++++++.|.
T Consensus 448 ~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~ 478 (479)
T PRK10077 448 LAALFMWKFVPETKGKTLEEMEALWEPETKK 478 (479)
T ss_pred HHHHHHHhccccCCCCCHHHHHHHHhhcccC
Confidence 9988888889999999999999999776653
No 5
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=100.00 E-value=1.1e-34 Score=340.89 Aligned_cols=208 Identities=22% Similarity=0.288 Sum_probs=185.0
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhCChHHHHHHHHHH
Q 005249 2 NGAALVAIAATIGNFLQGWDNATIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLY 81 (706)
Q Consensus 2 ~r~~liliil~L~~fl~gl~~~iis~~lp~I~q~fGLS~s~igLl~S~~~Ig~~Igsl~~G~LaDR~GRRrvLlig~iL~ 81 (706)
++.|.++++++++.+..+++...++.++|.+.+++|++..+.+++.+++.++++++++++|+++||+|||++++++.++.
T Consensus 163 ~~~~~l~~i~~l~~~~~g~d~~~is~ilp~i~~~~gls~~~~g~l~s~~~lG~iiG~li~G~LsDR~GRR~~lii~lil~ 242 (742)
T TIGR01299 163 RFQWALFFVLGLALMADGVEVFVVGFVLPSAEKDLCIPDSGKGMLGLIVYLGMMVGAFFWGGLADKLGRKQCLLICLSVN 242 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHH
Confidence 45677888889999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhhHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCcchhhHHhHHHHHHHHHHHHHHHHHHHHHHHh-----
Q 005249 82 FVSGLVMLWSPNVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLL----- 156 (706)
Q Consensus 82 aIgsll~a~a~s~~lLli~R~L~GIg~G~~~~~~~a~IsE~fP~k~Rg~a~Gi~~ag~~LG~alg~ll~~~l~l~----- 156 (706)
+++.++++++++++.++++|++.|++.|+..+...++++|++|++.|+++++++.++..+|.++++.+.......
T Consensus 243 ~i~~ll~afa~s~~~llv~R~l~G~g~g~~~p~~~~~isE~~p~~~Rg~~~g~~~~~~~iG~ila~~la~~il~~~G~~~ 322 (742)
T TIGR01299 243 GFFAFFSSFVQGYGFFLFCRLLSGFGIGGAIPIVFSYFAEFLAQEKRGEHLSWLCMFWMIGGIYAAAMAWAIIPHYGWSF 322 (742)
T ss_pred HHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchh
Confidence 999999999999999999999999999999999999999999999999999999999999999987655443211
Q ss_pred ------ccchhhHHHHHHHHHHHHHHHHHHhhccCCchhhhcccchHHHHHHHHHhhccc
Q 005249 157 ------ASPSWRLMLGVLSIPALLYFAFAVFFLPESPRWLVSKGKMLEAKQVLQRLRGRE 210 (706)
Q Consensus 157 ------~~~GWR~~FlI~ail~LV~~ll~~lflpEsp~~l~~k~~~~~~~~~~~~~~~~~ 210 (706)
...+||+.|++.++++++. ++.++++||+|+|+..+++.+++.+.+++++..+
T Consensus 323 ~~g~~~~~~gWR~l~~i~~lp~ll~-ll~~~~lPESPrwL~~~gr~~eA~~iL~~i~~~n 381 (742)
T TIGR01299 323 QMGSAYQFHSWRVFVIVCAFPCVFA-IGALTFMPESPRFFLENGKHDEAWMILKLIHDTN 381 (742)
T ss_pred ccccccccccHHHHHHHHHHHHHHH-HHHHHHcCCCHHHHHHCCCHHHHHHHHHHHhcCC
Confidence 1247999998887776654 4567889999999999999999999988876543
No 6
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=100.00 E-value=3.2e-41 Score=370.66 Aligned_cols=411 Identities=36% Similarity=0.622 Sum_probs=323.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHH--HHcCCCh---------hHHHHHHHHHHHHHHHHHHHHHHHhhhhCChHHHHHHHH
Q 005249 11 ATIGNFLQGWDNATIAGAIVYIK--KDLNLGT---------TVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSV 79 (706)
Q Consensus 11 l~L~~fl~gl~~~iis~~lp~I~--q~fGLS~---------s~igLl~S~~~Ig~~Igsl~~G~LaDR~GRRrvLlig~i 79 (706)
+.++.+..+++...++...+... ..+..+. .+.+++.+...+|..+|++++|.++||+|||++++++.+
T Consensus 5 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~G~~~~g~~~d~~GRk~~~~~~~~ 84 (451)
T PF00083_consen 5 ASLGGFLFGYDLGLIGSFASLLGFLQFFGWSSSESSCEKSSLLSSLLTSSFFIGAIVGALIFGFLADRYGRKPALIISAL 84 (451)
T ss_pred eHHHHHHHHHHHHHHhhHHhhhhhhhccccccccccccchHHHHHHHHHHHHhhhccccccccccccccccccccccccc
Confidence 45666888999988877665544 2333322 357889999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhh---hHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCcchhhHHhHHHHHHHHHHHHHHHHHHHHHHHh
Q 005249 80 LYFVSGLVMLWSP---NVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLL 156 (706)
Q Consensus 80 L~aIgsll~a~a~---s~~lLli~R~L~GIg~G~~~~~~~a~IsE~fP~k~Rg~a~Gi~~ag~~LG~alg~ll~~~l~l~ 156 (706)
+..++.++.++++ +++.++++|++.|++.|+..+....++.|..|+++|++..++.+.+..+|.+++.+........
T Consensus 85 ~~~i~~~~~~~~~~~~~~~~~~~~R~~~G~~~g~~~~~~~~~~~E~~~~~~R~~~~~~~~~~~~~G~~~~~~~~~~~~~~ 164 (451)
T PF00083_consen 85 LMIIGSILIAFAPSYNNFWMLLIGRFLIGFGIGGAYVVSPIYISEIAPPKHRGFLSSLFQLFWALGILLASLIGYIVSYY 164 (451)
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 9999999999999 9999999999999999999999999999999999999999999999999999986655443221
Q ss_pred -ccchhhHHHHHHHHHHHHHHHHHHhhccCCchhhhcccchHHHHHHHHHhhccccchHHHHHHHHhhccCCCcchhhhh
Q 005249 157 -ASPSWRLMLGVLSIPALLYFAFAVFFLPESPRWLVSKGKMLEAKQVLQRLRGREDVSGEMALLVEGLGIGGETSIEEYI 235 (706)
Q Consensus 157 -~~~GWR~~FlI~ail~LV~~ll~~lflpEsp~~l~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (706)
...+||..+.+.++++++.+ +..+++||||||+..+++.+|+++.++++++.+..+.+
T Consensus 165 ~~~~~Wr~~~~~~~~~~l~~~-~~~~~~pESP~wL~~~~~~~~A~~~l~~~~~~~~~~~~-------------------- 223 (451)
T PF00083_consen 165 SDNWGWRILLIFGAIPSLLVL-LLRFFLPESPRWLLSKGRDEEAEKVLRKLRGKEIEDEE-------------------- 223 (451)
T ss_pred ccccccccccccccccccccc-ccccccccccceeccccccccccccccccccccccccc--------------------
Confidence 23569999988888887744 45688999999999999999888877764433210000
Q ss_pred cCCCCCCCCCCCCchhhhhhhhcCCCCCcccccccccccchhhhHhhhccccCCCCCCCCccccccccccccCCCCCCCC
Q 005249 236 IGPGDELADGEEPTDEKDKIRLYGPEEGLSWVAKPVTGQSSLALVSRQGSLANQSVPLMDPLVTLFGSVHEKLPESGSMR 315 (706)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (706)
T Consensus 224 -------------------------------------------------------------------------------- 223 (451)
T PF00083_consen 224 -------------------------------------------------------------------------------- 223 (451)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccccCCCCCCccccccccccCCcchhhhhhccCCccccccCCCCCCCCCCccccccccccccccCCCCCCCccccccccc
Q 005249 316 STLFPTFGSMFSTAEHHVKHDHWDEESLQREGEDHASDIAGADSDDNLHSPLISRQTTSMEKDMAAPPSHGSILSMRRHS 395 (706)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 395 (706)
++++ .+
T Consensus 224 ----------------------~~~~---------------------~~------------------------------- 229 (451)
T PF00083_consen 224 ----------------------IEEI---------------------KA------------------------------- 229 (451)
T ss_pred ----------------------cccc---------------------cc-------------------------------
Confidence 0000 00
Q ss_pred ccccCCCccccccccCCCcccccchhhcccCCCcccCCccceeecccCCCCCCCCcccccCCCCCCccchHHHHHHHhhc
Q 005249 396 SLMQGSGEAVGSTGIGGGWQLAWKWTEREGEDGKKEGGFKRIYLHQEGVPGSRRGSLVSVPGYDVPEEGEYIQAAALVSQ 475 (706)
Q Consensus 396 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~i~~ 475 (706)
T Consensus 230 -------------------------------------------------------------------------------- 229 (451)
T PF00083_consen 230 -------------------------------------------------------------------------------- 229 (451)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhhhhhhhhccCCCCCCcCCCCccccCCCchHHHHhhh-hhhHHHHHHHHHHHHhhhhhhhhHhcHHHHHHhhhh-----
Q 005249 476 PALYSKELMDQHPVGPAMVHPSETASKGPSWAALLEAG-VKRALLVGVGIQILQQFSGINGVLYYTPQILEQAGV----- 549 (706)
Q Consensus 476 ~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~----- 549 (706)
+.++.++++.+|+++++.+ .++++++.+.+..++++++.+...+|.+.++++.|.
T Consensus 230 -------------------~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~ 290 (451)
T PF00083_consen 230 -------------------EKKESQESKASWRDLFRNKKYRKRLLIALLLQFFQQFSGINFIFYYSPSIFENAGISNSFL 290 (451)
T ss_pred -------------------ccccccccceeeeeccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 0000000013445555443 366778888888899999989999999999887654
Q ss_pred ---------------HHHHHhhhcchHHHHhHHHHHHHHHHHHHHHhhhhhhhhhHHHHHHHHHHHHHHHHhhcccccch
Q 005249 550 ---------------AMKLMDVAGRRKLLLTTIPVLIVSLIILVISETLQLISPVLKAGISTACVIIYFCCFVAAYGPIP 614 (706)
Q Consensus 550 ---------------~~~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 614 (706)
+.+++||+|||++++.+..++.++.+.+..........+.......+++.+++.+++..+++++.
T Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~GRr~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~g~~~~~ 370 (451)
T PF00083_consen 291 ATLILGLVNFLGTLLAIFLIDRFGRRKLLIIGLLLMAICSLILGIIFFLGVSSSSWWSILSIVFLALFFAFFSLGWGPLP 370 (451)
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccceeeeeccccccccccccc
Confidence 67999999999999999888887777765111111011112234455666777788888999999
Q ss_pred hhhhcccCCcchhhhHHHHHHHHHHHHHHHHHhHHHHHHHhhchhhHHHHHHHHHHHHHHHHHhcccCCCCCChHHHHHH
Q 005249 615 NILCAEIFPTKVRGICIAICAMAYWICDIIVTYTLPVMLSSIGLAGAFGVYAVVCFISWVFVFLRVPETKGMPLEVITEF 694 (706)
Q Consensus 615 ~~~~~e~~p~~~r~~~~~~~~~~~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~et~~~~~~~~~~~ 694 (706)
+.+++|+||++.|+++.+++..+.++++++.+.+.+.+.+..+....|.+++++++++.+++++++|||||+++||++++
T Consensus 371 ~~~~~ElfPt~~R~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~i~~i~~~~~lpET~g~~l~ei~~~ 450 (451)
T PF00083_consen 371 WIYTAELFPTKVRSTGIGLSYAVGRIGGFIIPFLFPYLFNNLGGWGVFLIFAGVCLIAIIFVYFFLPETKGKTLEEIQEM 450 (451)
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccchhhHHHHHHHHhheeEEEeeCCCCCHHHHHhh
Confidence 99999999999999999999999999999999999999988886668999999999999999999999999999999987
Q ss_pred H
Q 005249 695 F 695 (706)
Q Consensus 695 ~ 695 (706)
|
T Consensus 451 f 451 (451)
T PF00083_consen 451 F 451 (451)
T ss_pred C
Confidence 6
No 7
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=100.00 E-value=6.1e-33 Score=300.32 Aligned_cols=418 Identities=36% Similarity=0.644 Sum_probs=301.4
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC--------hhHHHHHHHHHHHHHHHHHHHHHHHhhhhCChHHHH
Q 005249 4 AALVAIAATIGNFLQGWDNATIAGAIVYIKKDLNLG--------TTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLI 75 (706)
Q Consensus 4 ~~liliil~L~~fl~gl~~~iis~~lp~I~q~fGLS--------~s~igLl~S~~~Ig~~Igsl~~G~LaDR~GRRrvLl 75 (706)
.+...+++.++.++..++...+++..+.+..+++.+ ..+.+++.+++.++++++++++|+++||+|||++++
T Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~ 105 (481)
T TIGR00879 26 VALLSLIAAIGGLMFGYDTGVIGGALALPAFEFKFTSANSDSYSSSLWGLVVSIFLVGGFIGALFAGWLSDRFGRKKSLL 105 (481)
T ss_pred HHHHHHHHHHHHHhcccccchhhhhhhcHHHHHhcCCcccCCCChhHHHHHHHHHHHHHHHHHHHhhHhhhhhhhHHHHH
Confidence 344455566667778888888888899888888877 899999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhh---hhHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCcchhhHHhHHHHHHHHHHHHHHHHHH-H
Q 005249 76 LSSVLYFVSGLVMLWS---PNVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMV-F 151 (706)
Q Consensus 76 ig~iL~aIgsll~a~a---~s~~lLli~R~L~GIg~G~~~~~~~a~IsE~fP~k~Rg~a~Gi~~ag~~LG~alg~ll~-~ 151 (706)
++.++.+++.+++.+. .+++.++++|++.|++.+...+....++.|++|+++|++++++.+.+..+|.++++.+. .
T Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~ 185 (481)
T TIGR00879 106 IIALLFVIGAILMGLAAFALSVEMLIVGRVLLGIGVGIASALVPMYLSEIAPKALRGALTSLYQLAITFGILVAYGFGSG 185 (481)
T ss_pred HHHHHHHHHHHHHHHhccccchHHHHHHHHHHHhhhhHHHhHHHHHHHccCChhhhhhhhhHHHHHHHHHHHHHHHHHHH
Confidence 9999999999988654 34568999999999999999999999999999999999999999999999999997666 1
Q ss_pred HHHHhccchhhHHHHHHHHHHHHHHHHHHhhccCCchhhhcccchHHHHHHHHHhhccccchHHHHHHHHhhccCCCcch
Q 005249 152 GMSLLASPSWRLMLGVLSIPALLYFAFAVFFLPESPRWLVSKGKMLEAKQVLQRLRGREDVSGEMALLVEGLGIGGETSI 231 (706)
Q Consensus 152 ~l~l~~~~GWR~~FlI~ail~LV~~ll~~lflpEsp~~l~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (706)
........+||+.|++.++..++ .++..+++||+|+++..+++.+++.+...+.....+...
T Consensus 186 ~~~~~~~~~w~~~f~~~~~~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------- 247 (481)
T TIGR00879 186 KVSLNNTLGWRIPLGLQLIPAGL-LFLGLFFLPESPRWLVGKGRVEEARKSLARLRGTSGEDK----------------- 247 (481)
T ss_pred hhcCCCCccHHHHHHHHHHHHHH-HHHHHhcCCCChHHHHHcCChHHHHHHHHHHhCCCCCcH-----------------
Confidence 13333556999999996665554 445567789998876554444333322221111000000
Q ss_pred hhhhcCCCCCCCCCCCCchhhhhhhhcCCCCCcccccccccccchhhhHhhhccccCCCCCCCCccccccccccccCCCC
Q 005249 232 EEYIIGPGDELADGEEPTDEKDKIRLYGPEEGLSWVAKPVTGQSSLALVSRQGSLANQSVPLMDPLVTLFGSVHEKLPES 311 (706)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (706)
+..+.
T Consensus 248 ------------------~~~~~--------------------------------------------------------- 252 (481)
T TIGR00879 248 ------------------ELLDE--------------------------------------------------------- 252 (481)
T ss_pred ------------------HHHHH---------------------------------------------------------
Confidence 00000
Q ss_pred CCCCccccCCCCCCccccccccccCCcchhhhhhccCCccccccCCCCCCCCCCccccccccccccccCCCCCCCccccc
Q 005249 312 GSMRSTLFPTFGSMFSTAEHHVKHDHWDEESLQREGEDHASDIAGADSDDNLHSPLISRQTTSMEKDMAAPPSHGSILSM 391 (706)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 391 (706)
.+
T Consensus 253 ----------------------------~~-------------------------------------------------- 254 (481)
T TIGR00879 253 ----------------------------LE-------------------------------------------------- 254 (481)
T ss_pred ----------------------------HH--------------------------------------------------
Confidence 00
Q ss_pred ccccccccCCCccccccccCCCcccccchhhcccCCCcccCCccceeecccCCCCCCCCcccccCCCCCCccchHHHHHH
Q 005249 392 RRHSSLMQGSGEAVGSTGIGGGWQLAWKWTEREGEDGKKEGGFKRIYLHQEGVPGSRRGSLVSVPGYDVPEEGEYIQAAA 471 (706)
Q Consensus 392 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 471 (706)
......
T Consensus 255 -------------------------------------------------------------------------~~~~~~- 260 (481)
T TIGR00879 255 -------------------------------------------------------------------------LIDIKR- 260 (481)
T ss_pred -------------------------------------------------------------------------HHHHHH-
Confidence 000000
Q ss_pred HhhchhhhhhhhhccCCCCCCcCCCCccccCCCchHHHHhhh--hhhHHHHHHHHHHHHhhhhhhhhHhcHHHHHHhhhh
Q 005249 472 LVSQPALYSKELMDQHPVGPAMVHPSETASKGPSWAALLEAG--VKRALLVGVGIQILQQFSGINGVLYYTPQILEQAGV 549 (706)
Q Consensus 472 ~i~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~ 549 (706)
.. +...+...+..+++.. ..++.++..++..+....+.+...+|.|.++++.|.
T Consensus 261 --------~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 316 (481)
T TIGR00879 261 --------SI----------------EKRSVQPSWGSLFSSTRRIRRRLFLGVVLQWFQQFTGINAIMYYSPTIFENAGV 316 (481)
T ss_pred --------HH----------------HHhhccccHHHHHhcCchhHHHHHHHHHHHHHHHHhCCeehHHHHHHHHHHcCC
Confidence 00 0000011133333211 234555555566665666666677888888776553
Q ss_pred ----------------------HHHHHhhhcchHHHHhHHHHHHHHHHHHHHHhhhhhhhh-hHHHHHHHHHHHHHHHHh
Q 005249 550 ----------------------AMKLMDVAGRRKLLLTTIPVLIVSLIILVISETLQLISP-VLKAGISTACVIIYFCCF 606 (706)
Q Consensus 550 ----------------------~~~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 606 (706)
.++++||+|||+.+.++..+.+++++++.+......... .......+...+++..++
T Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 396 (481)
T TIGR00879 317 STDHAFLVSIIVGAVNFAFTFVAIFLVDRFGRRPLLLIGAAGMAICLFVLGILGASFVTGSSKSSGNVAIVFILLFIAFF 396 (481)
T ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHhhcccCCcccchhHHHHHHHHHHHHHH
Confidence 889999999999998887777776666653221110000 001233344555666777
Q ss_pred hcccccchhhhhcccCCcchhhhHHHHHHHHHHHHHHHHHhHHHHHHHhhchhhHHHHHHHHHHHHHHHHHhcccCCCCC
Q 005249 607 VAAYGPIPNILCAEIFPTKVRGICIAICAMAYWICDIIVTYTLPVMLSSIGLAGAFGVYAVVCFISWVFVFLRVPETKGM 686 (706)
Q Consensus 607 ~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~et~~~ 686 (706)
+.+..++.+.++.|.+|++.|+++.|+.+++.+++.++++.+.+.+.+..||...|++++++++++.++.+++.||+|++
T Consensus 397 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~lg~~i~~~~~~~~~~~~~~~~~f~~~~~~~~~~~i~~~~~~~~~~~~ 476 (481)
T TIGR00879 397 AMGWGPVPWVIVSEIFPLSLRPKGISIAVAANWLANFIVGFLFPTMLESIGVGGVFIFFGGLNVLGLIFVYFFLPETKGR 476 (481)
T ss_pred HccccCeehhhhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccceehhHHHHHHHHHHHHheecccCCCC
Confidence 77778888889999999999999999999999999999999999999999999999999999999999988889999998
Q ss_pred ChHH
Q 005249 687 PLEV 690 (706)
Q Consensus 687 ~~~~ 690 (706)
++++
T Consensus 477 ~~~~ 480 (481)
T TIGR00879 477 TLEE 480 (481)
T ss_pred Chhh
Confidence 8764
No 8
>TIGR00898 2A0119 cation transport protein.
Probab=100.00 E-value=1e-31 Score=300.28 Aligned_cols=175 Identities=31% Similarity=0.491 Sum_probs=155.8
Q ss_pred HHHHHHHHHcCCC---hhHHHHHHHHHHHHHHHHHHHHHHHhhhhCChHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHH
Q 005249 27 GAIVYIKKDLNLG---TTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVMLWSPNVYVLCIARLL 103 (706)
Q Consensus 27 ~~lp~I~q~fGLS---~s~igLl~S~~~Ig~~Igsl~~G~LaDR~GRRrvLlig~iL~aIgsll~a~a~s~~lLli~R~L 103 (706)
+..+.+.++++++ ..+.+++.+++.++++++++++|+++||+|||++++++.++.+++.++++++++++.++++|++
T Consensus 110 ~~~~~i~~e~~l~c~~~~~~~~~~s~~~~g~~~g~~~~g~l~Dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~r~l 189 (505)
T TIGR00898 110 TFSSTIVTEWDLVCEDAWKVDLTQSCFFVGVLLGSFVFGYLSDRFGRKKVLLLSTLVTAVSGVLTAFSPNYTVFLVFRLL 189 (505)
T ss_pred cccccEEEEecceechHHHHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHH
Confidence 3557788999999 8999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhHHHHHHHHHHhcCCcchhhHHhHHHHHHHHHHHHHHHHHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHhhc
Q 005249 104 DGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSWRLMLGVLSIPALLYFAFAVFFL 183 (706)
Q Consensus 104 ~GIg~G~~~~~~~a~IsE~fP~k~Rg~a~Gi~~ag~~LG~alg~ll~~~l~l~~~~GWR~~FlI~ail~LV~~ll~~lfl 183 (706)
.|++.+...+...+++.|++|+++|+++.++...+..+|.++++++..... +||+.|++.+++.++.++. .+++
T Consensus 190 ~G~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~-----~wr~~~~~~~i~~~~~~~~-~~~~ 263 (505)
T TIGR00898 190 VGMGIGGIWVQAVVLNTEFLPKKQRAIVGTLIQVFFSLGLVLLPLVAYFIP-----DWRWLQLAVSLPTFLFFLL-SWFV 263 (505)
T ss_pred HHhhccchHHHHHHHhheecChhhhHHHHHHHHHHHHHHHHHHHHHHHHhh-----HHHHHHHHHHHHHHHHHHH-HHhc
Confidence 999999999999999999999999999999999999999998865543321 4999999999888776554 4789
Q ss_pred cCCchhhhcccchHHHHHHHHHhh
Q 005249 184 PESPRWLVSKGKMLEAKQVLQRLR 207 (706)
Q Consensus 184 pEsp~~l~~k~~~~~~~~~~~~~~ 207 (706)
||+|+|+..+++.+++.+.+++..
T Consensus 264 ~esp~~l~~~~~~~~a~~~l~~~~ 287 (505)
T TIGR00898 264 PESPRWLISQGRIEEALKILQRIA 287 (505)
T ss_pred CCChHHHHHCCCHHHHHHHHHHHH
Confidence 999999998888888777666543
No 9
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=100.00 E-value=7.6e-30 Score=286.52 Aligned_cols=184 Identities=19% Similarity=0.262 Sum_probs=153.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChhH----HHH--HHHHHHHHHHHHHHHHHHHhhhhCChHHHHHHHH
Q 005249 6 LVAIAATIGNFLQGWDNATIAGAIVYIKKDLNLGTTV----EGL--VVAMSLIGATAITTCSGPISDWLGRRPMLILSSV 79 (706)
Q Consensus 6 liliil~L~~fl~gl~~~iis~~lp~I~q~fGLS~s~----igL--l~S~~~Ig~~Igsl~~G~LaDR~GRRrvLlig~i 79 (706)
.++++.+++++++++|...++...|.+.+++..+.+. .+. +.++.++++.++++++|+++||+|||+++.++.+
T Consensus 16 ~~~~~~~~g~~~~~~d~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr~~l~~~~~ 95 (490)
T PRK10642 16 KAITAASLGNAMEWFDFGVYGFVAYALGKVFFPGADPSVQMIAALATFSVPFLIRPLGGLFFGMLGDKYGRQKILAITIV 95 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHH
Confidence 4566778899999999999999999999998644321 222 2477889999999999999999999999999999
Q ss_pred HHHHHHHHHHhhhhHHH--------HHHHHHHHHHHHHhHHHHHHHHHHhcCCcchhhHHhHHHHHHHHHHHHHHHHHHH
Q 005249 80 LYFVSGLVMLWSPNVYV--------LCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVF 151 (706)
Q Consensus 80 L~aIgsll~a~a~s~~l--------Lli~R~L~GIg~G~~~~~~~a~IsE~fP~k~Rg~a~Gi~~ag~~LG~alg~ll~~ 151 (706)
++++++++++++++++. ++++|+++|++.|+.++...++++|++|+++|+++.++.+.+..+|.+++..+..
T Consensus 96 l~~i~~~~~a~~~~~~~~g~~a~~~l~~~R~l~G~g~g~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~G~~lg~~~~~ 175 (490)
T PRK10642 96 IMSISTFCIGLIPSYATIGIWAPILLLLCKMAQGFSVGGEYTGASIFVAEYSPDRKRGFMGSWLDFGSIAGFVLGAGVVV 175 (490)
T ss_pred HHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhHhHhhHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999874 7889999999999999999999999999999999999999998899888865543
Q ss_pred HHHH------hccchhhHHHHHHHHHHHHHHHHHHhhccCCchhh
Q 005249 152 GMSL------LASPSWRLMLGVLSIPALLYFAFAVFFLPESPRWL 190 (706)
Q Consensus 152 ~l~l------~~~~GWR~~FlI~ail~LV~~ll~~lflpEsp~~l 190 (706)
.... ...+|||+.|++.++++++ .++....+||+|+|.
T Consensus 176 ~~~~~~~~~~~~~~gWR~~f~i~~~~~l~-~~~~~~~~~esp~~~ 219 (490)
T PRK10642 176 LISTIVGEANFLDWGWRIPFFIALPLGII-GLYLRHALEETPAFQ 219 (490)
T ss_pred HHHHhcCHHHhcCccHHHHHHHHHHHHHH-HHHHHHcCCCChhHH
Confidence 3221 2357999999987766654 334456789998764
No 10
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=99.98 E-value=1.6e-29 Score=277.94 Aligned_cols=185 Identities=21% Similarity=0.199 Sum_probs=169.7
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhCChHHHHHHHHHHHH
Q 005249 4 AALVAIAATIGNFLQGWDNATIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFV 83 (706)
Q Consensus 4 ~~liliil~L~~fl~gl~~~iis~~lp~I~q~fGLS~s~igLl~S~~~Ig~~Igsl~~G~LaDR~GRRrvLlig~iL~aI 83 (706)
.|.+++.++++++++++++..++...|.+.+++|++.++.+++.+++.+++++++++.|++.||+|||+++.++.+++++
T Consensus 6 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~ 85 (412)
T TIGR02332 6 FRRLIIFLFILFIFSFLDRINIGFAGLTMGKDLGLSATMFGLAATLFYAAYVICGIPSNIMLAIIGARRWIAGIMVLWGI 85 (412)
T ss_pred hhHHHHHHHHHHHHHHhhhhhHHHHHHhhHhhcCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhChHHHHHHHHHHHHH
Confidence 67788899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhhHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCcchhhHHhHHHHHHHHHHHHHHHHHHHHHHHh----ccc
Q 005249 84 SGLVMLWSPNVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLL----ASP 159 (706)
Q Consensus 84 gsll~a~a~s~~lLli~R~L~GIg~G~~~~~~~a~IsE~fP~k~Rg~a~Gi~~ag~~LG~alg~ll~~~l~l~----~~~ 159 (706)
+.++++++++++.+++.|++.|++.+...+....++.|++|+++|++++++++.+..+|.++++......... ...
T Consensus 86 ~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~ 165 (412)
T TIGR02332 86 ASTATMFATGPESLYLLRILVGIAEAGFLPGILLYLTFWFPAYFRARANALFMIAMPVTMALGLILSGYILALDGLMALK 165 (412)
T ss_pred HHHHHHHhcCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCcc
Confidence 9999999999999999999999999999999999999999999999999999999999999987665544321 245
Q ss_pred hhhHHHHHHHHHHHHHHHHHHhhccCCch
Q 005249 160 SWRLMLGVLSIPALLYFAFAVFFLPESPR 188 (706)
Q Consensus 160 GWR~~FlI~ail~LV~~ll~~lflpEsp~ 188 (706)
|||+.|++.++++++.+++.++++||+|+
T Consensus 166 gwr~~f~~~~~~~l~~~~~~~~~~~~~p~ 194 (412)
T TIGR02332 166 GWQWLFLLEGFPSVILGVMTWFWLDDSPD 194 (412)
T ss_pred chhHHHHHHHHHHHHHHHHHhhccCCCcc
Confidence 99999999999888877777788899874
No 11
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.98 E-value=5.9e-29 Score=269.45 Aligned_cols=186 Identities=24% Similarity=0.294 Sum_probs=167.8
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhCChHHHHHHHHHH
Q 005249 2 NGAALVAIAATIGNFLQGWDNATIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLY 81 (706)
Q Consensus 2 ~r~~liliil~L~~fl~gl~~~iis~~lp~I~q~fGLS~s~igLl~S~~~Ig~~Igsl~~G~LaDR~GRRrvLlig~iL~ 81 (706)
++.|.++.++++..++++++...++...|.+.+++|++..+.+++.+++.+++.+++++.|+++||+|||+++.++.++.
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~ 90 (406)
T PRK11551 11 SRLALTIGLCFLVALLEGLDLQSAGVAAPRMAQEFGLDVAQMGWAFSAGILGLLPGALLGGRLADRIGRKRILIVSVALF 90 (406)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHH
Confidence 46788888889999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhhHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCcchhhHHhHHHHHHHHHHHHHHHHHHHHHHHhccchh
Q 005249 82 FVSGLVMLWSPNVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSW 161 (706)
Q Consensus 82 aIgsll~a~a~s~~lLli~R~L~GIg~G~~~~~~~a~IsE~fP~k~Rg~a~Gi~~ag~~LG~alg~ll~~~l~l~~~~GW 161 (706)
+++.++++++++++.+++.|++.|++.+...+...+++.|++|+++|++++++.+.+..+|.++++.+.. ......+|
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~--~~~~~~~~ 168 (406)
T PRK11551 91 GLFSLATAQAWDFPSLLVARLLTGVGLGGALPNLIALTSEAVGPRLRGTAVSLMYCGVPFGGALASVIGV--LAAGDAAW 168 (406)
T ss_pred HHHHHHHHHhccHHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHccccCH
Confidence 9999999999999999999999999999999999999999999999999999999999999999865543 33456789
Q ss_pred hHHHHHHHHHHHHHHHHHHhhccCCchh
Q 005249 162 RLMLGVLSIPALLYFAFAVFFLPESPRW 189 (706)
Q Consensus 162 R~~FlI~ail~LV~~ll~~lflpEsp~~ 189 (706)
|+.|++.+++.++.+++..+++||+|++
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 196 (406)
T PRK11551 169 RHIFYVGGVGPLLLVPLLMRWLPESRAF 196 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCChhH
Confidence 9999998887777666666778887643
No 12
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.97 E-value=2.5e-29 Score=280.16 Aligned_cols=184 Identities=17% Similarity=0.002 Sum_probs=160.7
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhCChHHHHHHHHHHHH
Q 005249 4 AALVAIAATIGNFLQGWDNATIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFV 83 (706)
Q Consensus 4 ~~liliil~L~~fl~gl~~~iis~~lp~I~q~fGLS~s~igLl~S~~~Ig~~Igsl~~G~LaDR~GRRrvLlig~iL~aI 83 (706)
.+.++..+++++++.+.++..++...|.+.+++|++..+.|++.+++.++++++++++|+++||+|||+++.++.+++++
T Consensus 27 ~~~i~~~~~~~~~~~y~~r~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~~ 106 (467)
T PRK09556 27 FMQSYLVVFIGYLTMYLIRKNFKAAQNDMISTYGLSTTELGMIGLGFSITYGVGKTLVGYYADGKNTKQFLPFLLILSAI 106 (467)
T ss_pred HHHHHHHHHHHHHHHHHHhcChhhhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhhHhhccCccchHHHHHHHHHH
Confidence 45567788888899999999999999999999999999999999999999999999999999999999999998888887
Q ss_pred HHHHHHh-----hhhHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCcchhhHHhHHHHHHHHHHHHHHHHHHHHHHHh-c
Q 005249 84 SGLVMLW-----SPNVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLL-A 157 (706)
Q Consensus 84 gsll~a~-----a~s~~lLli~R~L~GIg~G~~~~~~~a~IsE~fP~k~Rg~a~Gi~~ag~~LG~alg~ll~~~l~l~-~ 157 (706)
+.+++++ +++++.++++|++.|++.+...+...+++++|+|+++|++++|+++.+.++|.++++.+....... .
T Consensus 107 ~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~rg~a~gi~~~~~~lG~~l~~~i~~~~~~~~~ 186 (467)
T PRK09556 107 CMLGFGASLGSGSVSLGLMIALWALSGFFQSTGGPCSYSTITRWTPRRKRGRFLGFWNISHNLGGAGAGGVALWGANYFF 186 (467)
T ss_pred HHHHHHHHHhcccchHHHHHHHHHHHHHHHhccchHHHHHHHHHcCccceeeeEEeeecccchhhhHHHHHHHHHHHhhc
Confidence 7776665 589999999999999999999999999999999999999999999999999999997665433221 1
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHhhccCCc
Q 005249 158 SPSWRLMLGVLSIPALLYFAFAVFFLPESP 187 (706)
Q Consensus 158 ~~GWR~~FlI~ail~LV~~ll~~lflpEsp 187 (706)
..+||..|.+.++++++..++.+++.++.|
T Consensus 187 ~~~~~~~f~~~g~~~~~~~i~~~~~~~~~p 216 (467)
T PRK09556 187 DGHVIGMFIFPSIIALIIGFIGLRYGSDSP 216 (467)
T ss_pred cCcchhHHHHHHHHHHHHHHHHHHhCCCCh
Confidence 236999999988888877777677777765
No 13
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.97 E-value=1.3e-28 Score=272.04 Aligned_cols=183 Identities=17% Similarity=0.187 Sum_probs=162.8
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhCChHHHHHHHHHHHH
Q 005249 4 AALVAIAATIGNFLQGWDNATIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFV 83 (706)
Q Consensus 4 ~~liliil~L~~fl~gl~~~iis~~lp~I~q~fGLS~s~igLl~S~~~Ig~~Igsl~~G~LaDR~GRRrvLlig~iL~aI 83 (706)
++.+...+++++++.+++...++..+|.+.+++|++..+.+++.+++.+++++++++.|+++||+|||+++.++.++.++
T Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~r~~~~~~~~~~~~ 100 (434)
T PRK11663 21 RRHILITMYLGYALFYFTRKSFNAAMPEMLADLGLSRSDIGLLATLFYITYGVSKFVSGIVSDRSNARYFMGIGLIATGI 100 (434)
T ss_pred HHHHHHHHHHHHHHHHHhhhhHHHhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhHHHhhcCCchhHHHHHHHHHH
Confidence 34556667788888888888889999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhhHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCcchhhHHhHHHHHHHHHHHHHHHHHHHHHHHhccchhhH
Q 005249 84 SGLVMLWSPNVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSWRL 163 (706)
Q Consensus 84 gsll~a~a~s~~lLli~R~L~GIg~G~~~~~~~a~IsE~fP~k~Rg~a~Gi~~ag~~LG~alg~ll~~~l~l~~~~GWR~ 163 (706)
+.++++++++++.+++.|++.|++.|..++...+++.+++|+++|++++++.+.+..+|.++++.+.... ....+||+
T Consensus 101 ~~~~~~~~~~~~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l--~~~~gw~~ 178 (434)
T PRK11663 101 INILFGFSSSLWAFALLWVLNAFFQGWGWPVCAKLLTAWYSRTERGGWWAIWNTAHNVGGALIPLVVGAI--ALHYGWRY 178 (434)
T ss_pred HHHHHHHHhHHHHHHHHHHHHHHHHHccchHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHcccHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999986554433 45579999
Q ss_pred HHHHHHHHHHHHHHHHHhhccCCch
Q 005249 164 MLGVLSIPALLYFAFAVFFLPESPR 188 (706)
Q Consensus 164 ~FlI~ail~LV~~ll~~lflpEsp~ 188 (706)
.|++.++++++..++.+++++|+|.
T Consensus 179 ~f~~~~i~~~~~~~~~~~~~~~~p~ 203 (434)
T PRK11663 179 GMMIAGIIAIVVGLFLCWRLRDKPQ 203 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCHh
Confidence 9999888877666666667788753
No 14
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=99.97 E-value=5.3e-28 Score=266.73 Aligned_cols=184 Identities=22% Similarity=0.254 Sum_probs=148.1
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC---CChhHHHHHH---HHHHHHHHHHHHHHHHHhhhhCChHHHHH
Q 005249 3 GAALVAIAATIGNFLQGWDNATIAGAIVYIKKDLN---LGTTVEGLVV---AMSLIGATAITTCSGPISDWLGRRPMLIL 76 (706)
Q Consensus 3 r~~liliil~L~~fl~gl~~~iis~~lp~I~q~fG---LS~s~igLl~---S~~~Ig~~Igsl~~G~LaDR~GRRrvLli 76 (706)
+++..+..+++++++++++...++...|.+.++++ .+..+.+... ++.+++..++++++|+++||+|||+++.+
T Consensus 19 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~G~l~Dr~Grr~~l~~ 98 (432)
T PRK10406 19 RRIWAIVGASSGNLVEWFDFYVYSFCSLYFAHIFFPSGNTTTQLLQTAGVFAAGFLMRPIGGWLFGRIADKHGRKKSMLI 98 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHH
Confidence 45556777788999999999999999999999985 5555444444 44455555999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhhhHH--------HHHHHHHHHHHHHHhHHHHHHHHHHhcCCcchhhHHhHHHHHHHHHHHHHHHH
Q 005249 77 SSVLYFVSGLVMLWSPNVY--------VLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYC 148 (706)
Q Consensus 77 g~iL~aIgsll~a~a~s~~--------lLli~R~L~GIg~G~~~~~~~a~IsE~fP~k~Rg~a~Gi~~ag~~LG~alg~l 148 (706)
+.++++++++++++++++. .++++|+++|++.|+.++...++++|++|+++|+++.++.+.+...|.+++.+
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~g~g~~~~~~~~~i~e~~p~~~rg~~~~~~~~~~~~G~~~~~~ 178 (432)
T PRK10406 99 SVCMMCFGSLVIACLPGYETIGTWAPALLLLARLFQGLSVGGEYGTSATYMSEVAVEGRKGFYASFQYVTLIGGQLLALL 178 (432)
T ss_pred HHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHhhhhhhHhhHHHHHHHhCCCCcccHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999988764 58889999999999999999999999999999999999999888888888765
Q ss_pred HHHHHHH------hccchhhHHHHHHHHHHHHHHHHHHhhccCCc
Q 005249 149 MVFGMSL------LASPSWRLMLGVLSIPALLYFAFAVFFLPESP 187 (706)
Q Consensus 149 l~~~l~l------~~~~GWR~~FlI~ail~LV~~ll~~lflpEsp 187 (706)
....... ....|||++|++.++++++.+ +....+||+|
T Consensus 179 ~~~~~~~~~~~~~~~~~gWr~~F~i~~~~~ll~~-~~~~~~~e~~ 222 (432)
T PRK10406 179 VVVVLQQTLEDAELREWGWRIPFALGAVLAVVAL-WLRRQLDETS 222 (432)
T ss_pred HHHHHHHhCCHHHHhccchHHHHHHHHHHHHHHH-HHHhcCCCCc
Confidence 4333221 125699999998777766543 3334456654
No 15
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.97 E-value=4.4e-28 Score=264.28 Aligned_cols=167 Identities=22% Similarity=0.293 Sum_probs=151.3
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhCChHHHHHHHHHHH
Q 005249 3 GAALVAIAATIGNFLQGWDNATIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYF 82 (706)
Q Consensus 3 r~~liliil~L~~fl~gl~~~iis~~lp~I~q~fGLS~s~igLl~S~~~Ig~~Igsl~~G~LaDR~GRRrvLlig~iL~a 82 (706)
.++..+..+.++++.++++.....+.+|.+.+++|++..+.+++.+++.+++.++++++|+++||+|||+++.++.++.+
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~~~~~~~~~~~l~~~~~g~l~dr~g~r~~l~~~~~~~~ 94 (426)
T PRK12307 15 PQKNALFSAWLGYVFDGFDFMLIFYIMYLIKADLGLTDMEGAFLATAAFIGRPFGGALFGLLADKFGRKPLMMWSIVAYS 94 (426)
T ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHH
Confidence 34556778889999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhhhHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCcchhhHHhHHHHHHHHHHHHHHHHHHHHHHHhccchhh
Q 005249 83 VSGLVMLWSPNVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSWR 162 (706)
Q Consensus 83 Igsll~a~a~s~~lLli~R~L~GIg~G~~~~~~~a~IsE~fP~k~Rg~a~Gi~~ag~~LG~alg~ll~~~l~l~~~~GWR 162 (706)
++.++++++++++.++++|++.|++.+..++....++.|++|+++|++++++...+..+|.++++.+.. ......+||
T Consensus 95 ~~~~~~~~~~~~~~l~~~r~l~G~g~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~~~l~~--~l~~~~~w~ 172 (426)
T PRK12307 95 VGTGLSGLASGVIMLTLSRFIVGMGMAGEYACASTYAVESWPKHLKSKASAFLVSGFGIGNIIAAYFMP--SFAEAYGWR 172 (426)
T ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCHhHhhHhhhHHHHHHhHHHHHHHHHHH--HHcccCCHH
Confidence 999999999999999999999999999999999999999999999999999999999999999854433 334566999
Q ss_pred HHHHHHHHH
Q 005249 163 LMLGVLSIP 171 (706)
Q Consensus 163 ~~FlI~ail 171 (706)
+.|++.++.
T Consensus 173 ~~f~i~~~~ 181 (426)
T PRK12307 173 AAFFVGLLP 181 (426)
T ss_pred HHHHHHHHH
Confidence 999875443
No 16
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.97 E-value=1.5e-27 Score=255.10 Aligned_cols=186 Identities=21% Similarity=0.237 Sum_probs=164.2
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhCChHHHHHHHHHH
Q 005249 2 NGAALVAIAATIGNFLQGWDNATIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLY 81 (706)
Q Consensus 2 ~r~~liliil~L~~fl~gl~~~iis~~lp~I~q~fGLS~s~igLl~S~~~Ig~~Igsl~~G~LaDR~GRRrvLlig~iL~ 81 (706)
++.|..+..++++++.++++...++++.|.+.+++|++..+.+++.+++.++.++++++.|+++||+|||++++++.++.
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~~~~~~~~~ 87 (405)
T TIGR00891 8 RAQWNAFSAAWLGWLLDAFDFFLVALVLAEVAGEFGLTTVDAASLISAALISRWFGALMFGLWGDRYGRRLPMVTSIVLF 87 (405)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHH
Confidence 45778888999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhhHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCcchhhHHhHHHHHHHHHHHHHHHHHHHHHHHhccchh
Q 005249 82 FVSGLVMLWSPNVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSW 161 (706)
Q Consensus 82 aIgsll~a~a~s~~lLli~R~L~GIg~G~~~~~~~a~IsE~fP~k~Rg~a~Gi~~ag~~LG~alg~ll~~~l~l~~~~GW 161 (706)
+++.++++++++++.+++.|++.|++.+...+...+++.|++|+++|++++++.+.+..+|.++++.+..........+|
T Consensus 88 ~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~~~w 167 (405)
T TIGR00891 88 SAGTLACGFAPGYITMFIARLVIGIGMGGEYGSSAAYVIESWPKHLRNKASGLLISGYAVGAVVAAQVYSLVVPVWGDGW 167 (405)
T ss_pred HHHHHHHHHhccHHHHHHHHHHHHhhhhhhhHHHHHHHHHhCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccH
Confidence 99999999999999999999999999999999999999999999999999999999999999999766554433222359
Q ss_pred hHHHHHHHHHHHHHHHHHHhhccCCch
Q 005249 162 RLMLGVLSIPALLYFAFAVFFLPESPR 188 (706)
Q Consensus 162 R~~FlI~ail~LV~~ll~~lflpEsp~ 188 (706)
|+.|++.+++.++ .++....+||+|+
T Consensus 168 ~~~f~~~~~~~~~-~~~~~~~~~~~~~ 193 (405)
T TIGR00891 168 RALFFISILPIIF-ALWLRKNIPEAED 193 (405)
T ss_pred HHHHHHHHHHHHH-HHHHHHhCCCChh
Confidence 9999876655554 3344566777754
No 17
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=99.97 E-value=6.3e-29 Score=264.89 Aligned_cols=412 Identities=21% Similarity=0.267 Sum_probs=306.3
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhCChHHHHHHHHHH
Q 005249 2 NGAALVAIAATIGNFLQGWDNATIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLY 81 (706)
Q Consensus 2 ~r~~liliil~L~~fl~gl~~~iis~~lp~I~q~fGLS~s~igLl~S~~~Ig~~Igsl~~G~LaDR~GRRrvLlig~iL~ 81 (706)
+.+|.....+..+++....-....+.+.|.+....|++..+..+++...+.+..+++..+|.++|++|||+.+.+..+..
T Consensus 74 rfq~yl~~~ag~gwmad~m~~m~~s~i~~~l~~~w~~s~~q~~llt~~v~~gmllga~~w~l~~d~~grr~~f~~T~l~t 153 (528)
T KOG0253|consen 74 RFQWYLFFVAGMGWMADAMEMMLLSLILPALDEVWGPSEGQAPLLTLSVFLGMLVGAMVWGLSADTIGRRKGFNLTFLVT 153 (528)
T ss_pred cchhhHHHHhhhHHHHHHHHHHHHHHHHHHHHhhhchhhhhhhHHHHHHHhhhhhhhhhhheehhhhhcchhhhhhHHHH
Confidence 45667777788888887777777777888999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhhHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCcchhhHHhHHHHHHHHHHHHHHHHHHHHHHHhccchh
Q 005249 82 FVSGLVMLWSPNVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSW 161 (706)
Q Consensus 82 aIgsll~a~a~s~~lLli~R~L~GIg~G~~~~~~~a~IsE~fP~k~Rg~a~Gi~~ag~~LG~alg~ll~~~l~l~~~~GW 161 (706)
++...+.+.++|+..+++.|.+.|+|.|+ .|...++-.|..|..+|.+-+-.. +.+.+|.+....+..+. ..+.||
T Consensus 154 ~v~~~is~~spnf~~L~~f~~l~~~g~gg-~pv~~~~yle~lp~~~r~~~~V~~-~~waig~v~ea~law~v--m~~~gw 229 (528)
T KOG0253|consen 154 GVFGVISGASPNFASLCVFRALWGFGVGG-LPVDSAIYLEFLPSSHRWLLTVMS-FFWAIGQVFEALLAWGV--MSNFGW 229 (528)
T ss_pred HHHHHhhcCCCCeehhhHHHHHHhccCCC-ccHhHHHHHHhccCcCCCcchhHH-HHHHHHHHHHHHHHHHH--HHhhhH
Confidence 99999999999999999999999999999 788889999999999999988777 89999999986665443 355699
Q ss_pred hHHHHHHHHHHHHHHHHHHhhccCCchhhhcccchHHHHHHHHHhhccccchHHHHHHHHhhccCCCcchhhhhcCCCCC
Q 005249 162 RLMLGVLSIPALLYFAFAVFFLPESPRWLVSKGKMLEAKQVLQRLRGREDVSGEMALLVEGLGIGGETSIEEYIIGPGDE 241 (706)
Q Consensus 162 R~~FlI~ail~LV~~ll~~lflpEsp~~l~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (706)
||.....+.+..+ +....+++||||||...+++..+|.+.++++.+.+...-..
T Consensus 230 r~~l~~~~~pl~~-~a~f~~w~~ESpRf~~~~G~~~kAletL~kiArmNg~qlpl------------------------- 283 (528)
T KOG0253|consen 230 RYLLFTSSTPLMF-AARFLVWVYESPRFYLAKGDDYKALETLHKIARMNGKQLPL------------------------- 283 (528)
T ss_pred HHHHHHHHhHHHH-HHHHHhhcccCcchhhhcCChHHHHHHHHHHHHhcCCCCCc-------------------------
Confidence 9988777755554 44557889999999999999999999998887765321000
Q ss_pred CCCCCCCchhhhhhhhcCCCCCcccccccccccchhhhHhhhccccCCCCCCCCccccccccccccCCCCCCCCccccCC
Q 005249 242 LADGEEPTDEKDKIRLYGPEEGLSWVAKPVTGQSSLALVSRQGSLANQSVPLMDPLVTLFGSVHEKLPESGSMRSTLFPT 321 (706)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (706)
| -+
T Consensus 284 -------------------------------g-------------------------vl--------------------- 286 (528)
T KOG0253|consen 284 -------------------------------G-------------------------VL--------------------- 286 (528)
T ss_pred -------------------------------c-------------------------ee---------------------
Confidence 0 00
Q ss_pred CCCCccccccccccCCcchhhhhhccCCccccccCCCCCCCCCCccccccccccccccCCCCCCCcccccccccccccCC
Q 005249 322 FGSMFSTAEHHVKHDHWDEESLQREGEDHASDIAGADSDDNLHSPLISRQTTSMEKDMAAPPSHGSILSMRRHSSLMQGS 401 (706)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 401 (706)
+-+...|+|..++|.+++.+.+
T Consensus 287 ------------------~~s~~~~~e~e~~~~~~~~~~a---------------------------------------- 308 (528)
T KOG0253|consen 287 ------------------ESSAIDRQEQEESDLDDSKSSA---------------------------------------- 308 (528)
T ss_pred ------------------eeehhhhhhhhhhchhhhhhcc----------------------------------------
Confidence 0000011111122222221111
Q ss_pred CccccccccCCCcccccchhhcccCCCcccCCccceeecccCCCCCCCCcccccCCCCCCccchHHHHHHHhhchhhhhh
Q 005249 402 GEAVGSTGIGGGWQLAWKWTEREGEDGKKEGGFKRIYLHQEGVPGSRRGSLVSVPGYDVPEEGEYIQAAALVSQPALYSK 481 (706)
Q Consensus 402 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~i~~~~~~~~ 481 (706)
T Consensus 309 -------------------------------------------------------------------------------- 308 (528)
T KOG0253|consen 309 -------------------------------------------------------------------------------- 308 (528)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhhccCCCCCCcCCCCccccCCCchHHHHhhhhhhHHHHHHHHHHHHhhhhhhhhHhcHHHHHHhhh---h---------
Q 005249 482 ELMDQHPVGPAMVHPSETASKGPSWAALLEAGVKRALLVGVGIQILQQFSGINGVLYYTPQILEQAG---V--------- 549 (706)
Q Consensus 482 ~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g---~--------- 549 (706)
.++.+....+++.++.+++.+....+++...++.+..+ ..+..+++.-. .
T Consensus 309 -----------------~ke~rg~~~nLlsp~lrkttlllw~iwfgnafsyyg~V-Llttelfqsgd~c~~~~r~~p~e~ 370 (528)
T KOG0253|consen 309 -----------------AKEVRGGTTNLLSPKLRKTTLLLWRIWFGNAFSYYGSV-LLTTELFQSGDACPLYNRFLPTEL 370 (528)
T ss_pred -----------------ccccccchHhhcChHHHHHHHHHHHHHHhhHHHHHHHH-HHHHHHHhccCccccchhcchhHH
Confidence 11122345677777888877777777666555443222 22222222110 0
Q ss_pred ------------------------------HHHHHhhhcchHHHHhHHHHHHHHHHHHHHHhhhhhhhhhHHHHHHHHHH
Q 005249 550 ------------------------------AMKLMDVAGRRKLLLTTIPVLIVSLIILVISETLQLISPVLKAGISTACV 599 (706)
Q Consensus 550 ------------------------------~~~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 599 (706)
++.++||+|||+.|....+++.++++.+......+ .+...
T Consensus 371 e~~~~c~~s~~~dYrdllitslaefPGlLIt~~iverlGRKkTMal~l~~f~iflfll~~c~~rn----------~~tvl 440 (528)
T KOG0253|consen 371 ETRANCPLSVAKDYRDLLITSLAEFPGLLITGVIVERLGRKKTMALSLILFGIFLFLLTTCKTRN----------AYTVL 440 (528)
T ss_pred HhhhcCCccchhHHHHHHHHHHhhCCchhHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHhcCcc----------hhHHH
Confidence 89999999999999999888888887776654433 11122
Q ss_pred HHHHHHhhcccccchhhhhcccCCcchhhhHHHHHHHHHHHHHHHHHhHHHHHHHhhchhhHHHHHHHHHHHHHHHHHhc
Q 005249 600 IIYFCCFVAAYGPIPNILCAEIFPTKVRGICIAICAMAYWICDIIVTYTLPVMLSSIGLAGAFGVYAVVCFISWVFVFLR 679 (706)
Q Consensus 600 ~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 679 (706)
++-.-+|..+.....|+|..|++|+++|+++.|.|+.+.+||+++.|+++ .+.. ..-..+.++++++++++.+.+.++
T Consensus 441 lf~arafisg~fqvaYvYtPEVyPTavRatgvGtcSsmaRIggI~~p~iA-~~~e-~s~sl~i~vy~~~~ilagIavcff 518 (528)
T KOG0253|consen 441 LFTARAFISGAFQVAYVYTPEVYPTAVRATGVGTCSSMARIGGIFSPVIA-MRAE-LSTSLPIFVYGALFILAGIAVCFF 518 (528)
T ss_pred HHHHHHHHhchheEEEEecCcccchhhhhcchhhhhhHHhhhhhhhhHHH-HHhc-cceeehHHHHHHHHHHHHHHheee
Confidence 22233344455667789999999999999999999999999999999999 3333 344558889999999999888887
Q ss_pred ccCCCCCCh
Q 005249 680 VPETKGMPL 688 (706)
Q Consensus 680 ~~et~~~~~ 688 (706)
--||||+.+
T Consensus 519 PiEtkGR~l 527 (528)
T KOG0253|consen 519 PIETKGRSL 527 (528)
T ss_pred eeccCCCCC
Confidence 779999875
No 18
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=99.97 E-value=9.5e-28 Score=261.53 Aligned_cols=169 Identities=17% Similarity=0.097 Sum_probs=141.8
Q ss_pred HHHHHHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhCChHHHHHHHHHHHHHHHHHHhhhhHHHH
Q 005249 18 QGWDNATIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVMLWSPNVYVL 97 (706)
Q Consensus 18 ~gl~~~iis~~lp~I~q~fGLS~s~igLl~S~~~Ig~~Igsl~~G~LaDR~GRRrvLlig~iL~aIgsll~a~a~s~~lL 97 (706)
+......+++.+|.+.+++|++..+.|++.+++.+++++++++.|+++||+|||+++..+......+.+.....++++.+
T Consensus 3 ~~~~~~~~~~~lp~i~~~~~~s~~~~g~~~s~~~~g~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~l 82 (368)
T TIGR00903 3 SQAIWVTFSPVLSLVAEDIDVSKEELGLLAITYPAAFLALTIPSGLLLDRAFKRWFLFGSLATFAAAAGRLLDPFNYEWL 82 (368)
T ss_pred hhHHHHHHHhhHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHHhccHHHH
Confidence 34455677889999999999999999999999999999999999999999999988766555554544433334799999
Q ss_pred HHHHHHHHHHHHhHHHHHHHHHHhcCCcchhhHHhHHHHHHHHHHHHHHHHHHHHHHHhccchhhHHHHHHHHHHHHHHH
Q 005249 98 CIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSWRLMLGVLSIPALLYFA 177 (706)
Q Consensus 98 li~R~L~GIg~G~~~~~~~a~IsE~fP~k~Rg~a~Gi~~ag~~LG~alg~ll~~~l~l~~~~GWR~~FlI~ail~LV~~l 177 (706)
+++|++.|++.+.. ......++|++|+++|++++++.+.+..+|.++++.+.... ....|||+.|++.++++++..+
T Consensus 83 ~~~R~l~G~g~~~~-~~~~~~~~~~~~~~~r~~a~~~~~~~~~lG~~l~~~~~~~l--~~~~gWr~~f~~~~~l~~~~~~ 159 (368)
T TIGR00903 83 LACQLLAALGQPFL-LNAFAPAASQIREERRDLVISLLSFAMYLGIIFALAAGLKI--YTAGGLQLLIIPIAAVAAAGII 159 (368)
T ss_pred HHHHHHHHhHhHHH-HHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHccchHHHHHHHHHHHHHHHH
Confidence 99999999999964 56666779999999999999999999999999996555444 4567999999999998888887
Q ss_pred HHHhhccCCchh
Q 005249 178 FAVFFLPESPRW 189 (706)
Q Consensus 178 l~~lflpEsp~~ 189 (706)
+.++++||+|++
T Consensus 160 ~~~~~lp~~p~~ 171 (368)
T TIGR00903 160 LVLAALPALPFQ 171 (368)
T ss_pred HHHHHcCCCCCC
Confidence 888889998753
No 19
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.97 E-value=7.1e-28 Score=253.56 Aligned_cols=174 Identities=18% Similarity=0.189 Sum_probs=147.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhCChHHHHHHHHHHHHHHHHH
Q 005249 9 IAATIGNFLQGWDNATIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVM 88 (706)
Q Consensus 9 iil~L~~fl~gl~~~iis~~lp~I~q~fGLS~s~igLl~S~~~Ig~~Igsl~~G~LaDR~GRRrvLlig~iL~aIgsll~ 88 (706)
+...+..+..+ ....+++..|.+.+++|++..+.+++.+++.+++.++++++|.++||+|||+++.++.++.+++.+++
T Consensus 7 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~d~~G~r~~~~~~~~~~~~~~~~~ 85 (377)
T TIGR00890 7 VGTVIMCFTSG-YVYTWTLLAPPLGRYFGVGVTAVAIWFTLLLIGLAMSMPVGGLLADKFGPRAVAMLGGILYGLGFTFY 85 (377)
T ss_pred HHHHHHHHHhh-HHhhhhhHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHcCccchhHHhHHHHHHHHHHH
Confidence 33333333333 35667889999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhhhHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCcchhhHHhHHHHHHHHHHHHHHHHHHHHHHHhccchhhHHHHHH
Q 005249 89 LWSPNVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSWRLMLGVL 168 (706)
Q Consensus 89 a~a~s~~lLli~R~L~GIg~G~~~~~~~a~IsE~fP~k~Rg~a~Gi~~ag~~LG~alg~ll~~~l~l~~~~GWR~~FlI~ 168 (706)
+++++++.++++|++.|++.+..++.....+.+++| ++|++++++...+.++|.++++.... ...+..+||+.|++.
T Consensus 86 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~--~~~~~~~~~~~f~~~ 162 (377)
T TIGR00890 86 AIADSLAALYLTYGLASAGVGIAYGIALNTAVKWFP-DKRGLASGIIIGGYGLGSFILSPLIT--SVINLEGVPAAFIYM 162 (377)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHhHHHHHHHHcC-cccHHHHHHHHHhcchhHhHHHHHHH--HHHhcccHHHHHHHH
Confidence 999999999999999999999988888889999998 56999999999999999887543332 223456999999999
Q ss_pred HHHHHHHHHHHHhhccCC
Q 005249 169 SIPALLYFAFAVFFLPES 186 (706)
Q Consensus 169 ail~LV~~ll~~lflpEs 186 (706)
++++++.+++.+++++++
T Consensus 163 ~~~~~~~~~~~~~~~~~~ 180 (377)
T TIGR00890 163 GIIFLLVIVLGAFLIGYP 180 (377)
T ss_pred HHHHHHHHHHHHHheecC
Confidence 998888777766666654
No 20
>PRK03545 putative arabinose transporter; Provisional
Probab=99.97 E-value=5.3e-27 Score=254.30 Aligned_cols=182 Identities=18% Similarity=0.159 Sum_probs=156.4
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhCChHHHHHHHHHHH
Q 005249 3 GAALVAIAATIGNFLQGWDNATIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYF 82 (706)
Q Consensus 3 r~~liliil~L~~fl~gl~~~iis~~lp~I~q~fGLS~s~igLl~S~~~Ig~~Igsl~~G~LaDR~GRRrvLlig~iL~a 82 (706)
+.|..++.+.++.++.........+.+|.+.+++|++..+.+++.+++.+++.++++++|.++||+|||+++..+.++.+
T Consensus 6 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~ 85 (390)
T PRK03545 6 VAWLRVVTLALAAFIFNTTEFVPVGLLSDIAQSFHMQTAQVGLMLTIYAWVVALMSLPLMLLTSNVERRKLLIGLFVLFI 85 (390)
T ss_pred cchHHHHHHHHHHHHHHhHHHHHHcchHHHHhHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHH
Confidence 44555555566555555555555667899999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhhhHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCcchhhHHhHHHHHHHHHHHHHHHHHHHHHHHhccchhh
Q 005249 83 VSGLVMLWSPNVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSWR 162 (706)
Q Consensus 83 Igsll~a~a~s~~lLli~R~L~GIg~G~~~~~~~a~IsE~fP~k~Rg~a~Gi~~ag~~LG~alg~ll~~~l~l~~~~GWR 162 (706)
+++++++++++++.++++|++.|++.+...+...+++.+++|+++|++++|+...+..+|.++++.+... ..+..|||
T Consensus 86 ~~~~~~~~~~~~~~l~~~r~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~g~~~~~~~~g~~ig~~l~~~--l~~~~gw~ 163 (390)
T PRK03545 86 ASHVLSALAWNFTVLLISRIGIAFAHAIFWSITASLAIRVAPAGKKAQALSLLATGTALAMVLGLPLGRV--IGQYLGWR 163 (390)
T ss_pred HHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhhhhhHHHHHHHHHHHHHHHHhhHHHH--HHHHhcHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999655533 34556999
Q ss_pred HHHHHHHHHHHHHHHHHHhhccCC
Q 005249 163 LMLGVLSIPALLYFAFAVFFLPES 186 (706)
Q Consensus 163 ~~FlI~ail~LV~~ll~~lflpEs 186 (706)
+.|++.++++++..++.+.++|+.
T Consensus 164 ~~f~~~~~~~~l~~~~~~~~~~~~ 187 (390)
T PRK03545 164 TTFLAIGGGALITLLLLIKLLPLL 187 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCC
Confidence 999999988877666655556654
No 21
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.97 E-value=1.5e-27 Score=250.78 Aligned_cols=171 Identities=19% Similarity=0.184 Sum_probs=154.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhCChHHHHHHHHHHHHHHHHHHhhhhH
Q 005249 15 NFLQGWDNATIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVMLWSPNV 94 (706)
Q Consensus 15 ~fl~gl~~~iis~~lp~I~q~fGLS~s~igLl~S~~~Ig~~Igsl~~G~LaDR~GRRrvLlig~iL~aIgsll~a~a~s~ 94 (706)
++++.+++..++...|.+.+++|++..+.+++.+++.++..++.++.|+++||+|||+++.++.++.+++.+++++++++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~ 82 (399)
T TIGR00893 3 TVINYLDRANLSFAAPMLQEDLGLSAAQYGYVFSAFSWGYVVGQFPGGWLLDRFGARKTLAVFIVIWGVFTGLQAFAGAY 82 (399)
T ss_pred ehHHHHHHHhhhHhHHHHHHhhCCChhhHHHHHHHHHHHHHHHHHhHHHHHHhcCcceeeHHHHHHHHHHHHHHHHHcCH
Confidence 45677888888999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHhcCCcchhhHHhHHHHHHHHHHHHHHHHHHHHHHHhccchhhHHHHHHHHHHHH
Q 005249 95 YVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSWRLMLGVLSIPALL 174 (706)
Q Consensus 95 ~lLli~R~L~GIg~G~~~~~~~a~IsE~fP~k~Rg~a~Gi~~ag~~LG~alg~ll~~~l~l~~~~GWR~~FlI~ail~LV 174 (706)
+.++++|++.|++.+...+....++.|++|+++|++++++.+.+..+|.++++.+.... ....+||+.|++.+++.++
T Consensus 83 ~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l--~~~~~~~~~~~~~~~~~~~ 160 (399)
T TIGR00893 83 VSLYILRVLLGAAEAPFFPGIILIVASWFPASERATAVSIFNSAQGLGGIIGGPLVGWI--LIHFSWQWAFIIEGVLGII 160 (399)
T ss_pred HHHHHHHHHHHHHHHhhhhHHHHHHHHhCCHHHHHHHHHHHHHhchHHHHHHHHHHHHH--HHhCCchHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999996555433 3456899999999888887
Q ss_pred HHHHHHhhccCCc
Q 005249 175 YFAFAVFFLPESP 187 (706)
Q Consensus 175 ~~ll~~lflpEsp 187 (706)
..++.+++.+|+|
T Consensus 161 ~~~~~~~~~~~~~ 173 (399)
T TIGR00893 161 WGVLWLKFIPDPP 173 (399)
T ss_pred HHHHhhheecCCC
Confidence 7766666677664
No 22
>PRK09952 shikimate transporter; Provisional
Probab=99.96 E-value=4.7e-27 Score=260.43 Aligned_cols=185 Identities=19% Similarity=0.236 Sum_probs=148.5
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHc--CCChhHHHHHH-----HHHHHHHHHHHHHHHHHhhhhCChHHH
Q 005249 3 GAALVAIAATIGNFLQGWDNATIAGAIVY-IKKDL--NLGTTVEGLVV-----AMSLIGATAITTCSGPISDWLGRRPML 74 (706)
Q Consensus 3 r~~liliil~L~~fl~gl~~~iis~~lp~-I~q~f--GLS~s~igLl~-----S~~~Ig~~Igsl~~G~LaDR~GRRrvL 74 (706)
+.+.++...++++++++++...++.+.|. +.+++ ++++. .+++. ++.+++..+++++.|+++||+|||+++
T Consensus 19 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~G~l~Dr~Grr~~l 97 (438)
T PRK09952 19 RARRAALGSFAGAVVDWYDFLLYGITAALVFNREFFPQVSPA-MGTLAAFATFGVGFLFRPLGGVVFGHFGDRLGRKRML 97 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcH-HHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhccHHHH
Confidence 34556778888999999999999888774 56666 67776 45443 345566789999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhhhHH--------HHHHHHHHHHHHHHhHHHHHHHHHHhcCCcchhhHHhHHHHHHHHHHHHHH
Q 005249 75 ILSSVLYFVSGLVMLWSPNVY--------VLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLA 146 (706)
Q Consensus 75 lig~iL~aIgsll~a~a~s~~--------lLli~R~L~GIg~G~~~~~~~a~IsE~fP~k~Rg~a~Gi~~ag~~LG~alg 146 (706)
.++.++++++++++++++++. .++++|+++|++.|+.++....++.|++|+++|++.++..+.+..+|.+++
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~rg~~~~~~~~g~~~G~~l~ 177 (438)
T PRK09952 98 MLTVWMMGIATALIGLLPSFSTIGWWAPVLLVTLRAIQGFAVGGEWGGAALLAVESAPKNKKAFYSSGVQVGYGVGLLLS 177 (438)
T ss_pred HHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhhhcccHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHH
Confidence 999999999999999999987 588899999999999999999999999999999999999999999999888
Q ss_pred HHHHHHHHH------hccchhhHHHHHHHHHHHHHHHHHHhhccCCchh
Q 005249 147 YCMVFGMSL------LASPSWRLMLGVLSIPALLYFAFAVFFLPESPRW 189 (706)
Q Consensus 147 ~ll~~~l~l------~~~~GWR~~FlI~ail~LV~~ll~~lflpEsp~~ 189 (706)
..+...... ....|||+.|++.+++.++. ++.....||+|+|
T Consensus 178 ~~~~~~l~~~~~~~~~~~~gWr~~f~~~~~~~l~~-~~l~~~~~es~~~ 225 (438)
T PRK09952 178 TGLVSLISMMTTDEQFLSWGWRIPFLFSIVLVLIA-LWVRNGMEESAEF 225 (438)
T ss_pred HHHHHHHHHhCCHHHhhccChHHHHHHHHHHHHHH-HHHHHhCCCChhH
Confidence 554433321 12469999999887765542 3333456777654
No 23
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=99.96 E-value=9.2e-28 Score=261.27 Aligned_cols=186 Identities=17% Similarity=0.171 Sum_probs=175.4
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhCChHHHHHHHHHHH
Q 005249 3 GAALVAIAATIGNFLQGWDNATIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYF 82 (706)
Q Consensus 3 r~~liliil~L~~fl~gl~~~iis~~lp~I~q~fGLS~s~igLl~S~~~Ig~~Igsl~~G~LaDR~GRRrvLlig~iL~a 82 (706)
.++-+++.+++++...++.+..++.++|.+.++.++|.+|.|++.+++.+.|.++.++.|.++||.+.|+.+.+++++.+
T Consensus 26 ~r~qif~~~fiGYa~fYl~RknF~~a~p~l~e~~~lsk~~lG~i~s~f~i~YG~sKf~~G~~sDr~npr~fm~~gLilsa 105 (448)
T COG2271 26 WRIQIFLSIFIGYAAFYLTRKNFNLAMPALIEDGGLSKTQLGILGSAFSITYGVSKFVMGVLSDRSNPRYFMAFGLILSA 105 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhHhhccHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCceeehHHHHHHH
Confidence 45668889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhhhHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCcchhhHHhHHHHHHHHHHHHHHHHHHHHHHHhccchhh
Q 005249 83 VSGLVMLWSPNVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSWR 162 (706)
Q Consensus 83 Igsll~a~a~s~~lLli~R~L~GIg~G~~~~~~~a~IsE~fP~k~Rg~a~Gi~~ag~~LG~alg~ll~~~l~l~~~~GWR 162 (706)
+.+++++++++.+.+.++.++.|..+|..+|++...++.|+|+++||+..++++++.++|.++.+.+..........+||
T Consensus 106 i~nil~Gfs~s~~~~~~l~~lng~fQg~Gwpp~~~~i~~Wfsr~eRG~~~siWn~shNiGGal~~~~~~la~~~~~~~w~ 185 (448)
T COG2271 106 IVNILFGFSPSLFLFAVLWVLNGWFQGMGWPPCARTITHWFSRKERGTWWSIWNTSHNIGGALAPLVALLAFFAFHGGWR 185 (448)
T ss_pred HHHHHHhhhhHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHcCccccCceEEEehhhhhcccchHHHHHHHHHHHhccchh
Confidence 99999999999999999999999999999999999999999999999999999999999999987776445555566999
Q ss_pred HHHHHHHHHHHHHHHHHHhhccCCch
Q 005249 163 LMLGVLSIPALLYFAFAVFFLPESPR 188 (706)
Q Consensus 163 ~~FlI~ail~LV~~ll~~lflpEsp~ 188 (706)
..|++.++++++..++.++..+|+|.
T Consensus 186 ~~f~~pgiiaiival~~~~~~rd~Pq 211 (448)
T COG2271 186 AAFYFPGIIAIIVALILLFLLRDRPQ 211 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCcc
Confidence 99999999999999999999999974
No 24
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.96 E-value=2.6e-26 Score=255.03 Aligned_cols=182 Identities=18% Similarity=0.166 Sum_probs=153.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhCChHHHHHHHHHHHH
Q 005249 4 AALVAIAATIGNFLQGWDNATIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFV 83 (706)
Q Consensus 4 ~~liliil~L~~fl~gl~~~iis~~lp~I~q~fGLS~s~igLl~S~~~Ig~~Igsl~~G~LaDR~GRRrvLlig~iL~aI 83 (706)
.|.++..+++.+...+.++..++..+|++.++ |++..+.+++.+++.++++++++++|+++||+|||++++++.++.++
T Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~-g~s~~~~g~~~~~~~i~~~~~~~~~G~l~Dr~g~k~~l~~~~~~~~i 105 (452)
T PRK11273 27 RWQIFLGIFFGYAAYYLVRKNFALAMPYLVEQ-GFSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLILAAA 105 (452)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHc-CCCHHHHHHHHHHHHHHHHHHHhhhhhhhhccCCchhHHHHHHHHHH
Confidence 45555666677777777877788888998888 99999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhh----hHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCcchhhHHhHHHHHHHHHHHHH-HHHHHHHHHHhcc
Q 005249 84 SGLVMLWSP----NVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFL-AYCMVFGMSLLAS 158 (706)
Q Consensus 84 gsll~a~a~----s~~lLli~R~L~GIg~G~~~~~~~a~IsE~fP~k~Rg~a~Gi~~ag~~LG~al-g~ll~~~l~l~~~ 158 (706)
+.+++++++ +++.++++|++.|++.+..++.....+.+++|+++|++++++++.+..+|..+ +++...... ..
T Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~l~gi~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~--~~ 183 (452)
T PRK11273 106 VMLFMGFVPWATSSIAVMFVLLFLCGWFQGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGLPPLLFLLGMA--WF 183 (452)
T ss_pred HHHHHHhhhcccccHHHHHHHHHHHHHHHhccchHHHHHHHHhCChHHHHHHHHHHHHHHHhhhhHHHHHHHHHHH--Hh
Confidence 999888753 78888999999999999988888889999999999999999999999988754 433222221 23
Q ss_pred chhhHHHHHHHHHHHHHHHHHHhhccCCch
Q 005249 159 PSWRLMLGVLSIPALLYFAFAVFFLPESPR 188 (706)
Q Consensus 159 ~GWR~~FlI~ail~LV~~ll~~lflpEsp~ 188 (706)
.+||+.|++.++++++..++.++++||+|+
T Consensus 184 ~gw~~~f~i~~~~~~~~~~l~~~~~~~~~~ 213 (452)
T PRK11273 184 NDWHAALYMPAFAAILVALFAFAMMRDTPQ 213 (452)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHccCCHh
Confidence 499999999998888877777788888763
No 25
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.96 E-value=4.6e-26 Score=253.57 Aligned_cols=183 Identities=22% Similarity=0.284 Sum_probs=159.6
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhCChHHHHHHHHHHH
Q 005249 3 GAALVAIAATIGNFLQGWDNATIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYF 82 (706)
Q Consensus 3 r~~liliil~L~~fl~gl~~~iis~~lp~I~q~fGLS~s~igLl~S~~~Ig~~Igsl~~G~LaDR~GRRrvLlig~iL~a 82 (706)
+.+..+..++++++++.++....++.+|.+.+++|++..+.+++.+++.++++++.++.|+++||+|||++++++.++.+
T Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~ 96 (496)
T PRK03893 17 AQWKAFSAAWLGYLLDGFDFVLITLVLTEVQGEFGLTTVQAASLISAAFISRWFGGLLLGAMGDRYGRRLAMVISIVLFS 96 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHH
Confidence 34567788889999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhhhHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCcchhhHHhHHHHHHHHHHHHHHHHHHHHHHHhccchhh
Q 005249 83 VSGLVMLWSPNVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSWR 162 (706)
Q Consensus 83 Igsll~a~a~s~~lLli~R~L~GIg~G~~~~~~~a~IsE~fP~k~Rg~a~Gi~~ag~~LG~alg~ll~~~l~l~~~~GWR 162 (706)
++.++++++++++.+++.|++.|++.+..++....++.|++|+++|++++++...+..+|.++++.+... .....+||
T Consensus 97 ~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~--l~~~~~w~ 174 (496)
T PRK03893 97 VGTLACGFAPGYWTLFIARLVIGMGMAGEYGSSATYVIESWPKHLRNKASGFLISGFSIGAVVAAQVYSL--VVPVWGWR 174 (496)
T ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HhccCCHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999655543 34567999
Q ss_pred HHHHHHHHHHHHHHHHHHhhccCCch
Q 005249 163 LMLGVLSIPALLYFAFAVFFLPESPR 188 (706)
Q Consensus 163 ~~FlI~ail~LV~~ll~~lflpEsp~ 188 (706)
+.|++.++..++ .++....+||+++
T Consensus 175 ~~f~~~~~~~~~-~~~~~~~~p~~~~ 199 (496)
T PRK03893 175 ALFFIGILPIIF-ALWLRKNLPEAED 199 (496)
T ss_pred HHHHHHHHHHHH-HHHHHHhCCCchh
Confidence 999875443333 3333445566644
No 26
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=99.96 E-value=3.1e-28 Score=266.21 Aligned_cols=416 Identities=22% Similarity=0.286 Sum_probs=298.3
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-C-------CChhHHHHHHHHHHHHHHHHHHHHHHHhhhhCChHH
Q 005249 2 NGAALVAIAATIGNFLQGWDNATIAGAIVYIKKDL-N-------LGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPM 73 (706)
Q Consensus 2 ~r~~liliil~L~~fl~gl~~~iis~~lp~I~q~f-G-------LS~s~igLl~S~~~Ig~~Igsl~~G~LaDR~GRRrv 73 (706)
||-...++++.++.+.++|+...++.+.|.+...| + ++....+.+..+..+|.++|+++.|++.||+|||++
T Consensus 37 w~~fk~i~iAG~GfftDsYDlF~I~lVt~il~~lY~~~~~~~g~~ps~i~~~Vn~~A~vGti~GQl~FG~lgD~~GRK~v 116 (538)
T KOG0252|consen 37 WKHFKAIIIAGMGFFTDSYDLFSISLVTKILGYLYYHGDESGGHYPSGVLALVNAAALVGTIFGQLFFGWLGDKFGRKKV 116 (538)
T ss_pred HHHHHHHHHhhhhhcccchhhhhHHHHHHHHHHHhcCCCCCCCcCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhcchhh
Confidence 34556788889999999999999999999877754 2 455778889999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhh-------hHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCcchhhHHhHHHHHHHHHHHHHH
Q 005249 74 LILSSVLYFVSGLVMLWSP-------NVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLA 146 (706)
Q Consensus 74 Llig~iL~aIgsll~a~a~-------s~~lLli~R~L~GIg~G~~~~~~~a~IsE~fP~k~Rg~a~Gi~~ag~~LG~alg 146 (706)
+...++++++++++++++. -.+++...|+++|+|.|+.+|...+.++|....+.||...+.+-+..+.|.+.|
T Consensus 117 YG~~liImIi~t~~~~~s~~~~~~~~~m~~L~~~R~~LGiGIGGDYPlSAtI~SE~an~~~RGa~iaavFa~Qg~GilaG 196 (538)
T KOG0252|consen 117 YGKELIIMIICSALSGLSVGTTSPLGVMMTLCFFRFLLGIGIGGDYPLSATIMSESANKKTRGAFIAAVFAMQGFGILAG 196 (538)
T ss_pred hhHHHHHHHHHHHHhccCCCCCCCcchhhHHHHHHHHhhccccCCCcchHHHhhhhhhhccccceeEEEEEecchhHhhc
Confidence 9999999999999888742 246677779999999999999999999999999999999999888888888888
Q ss_pred HHHHHHHHHh-------------ccchhhHHHHHHHHHHHHHHHHHHhhccCCchhhhcccchHHHHHHHHHhhccccch
Q 005249 147 YCMVFGMSLL-------------ASPSWRLMLGVLSIPALLYFAFAVFFLPESPRWLVSKGKMLEAKQVLQRLRGREDVS 213 (706)
Q Consensus 147 ~ll~~~l~l~-------------~~~GWR~~FlI~ail~LV~~ll~~lflpEsp~~l~~k~~~~~~~~~~~~~~~~~~~~ 213 (706)
.++....... ...-||..|.+.++++++++ ...+.+||++||-....++ .++..++.
T Consensus 197 ~ivt~Iv~~~fe~~~~~~~~~~~ld~vWRl~~glg~vpa~~~l-y~Rl~M~Et~~Y~al~~~~--~~~a~~d~------- 266 (538)
T KOG0252|consen 197 GIVALIVSAIFEKIFNGPSTYPHLDGVWRIIFGLGAVPALLVL-YFRLKMPETARYTALVSKK--LKQAAGDM------- 266 (538)
T ss_pred cHHHHHHHHHHhccCCCCCCchHHHHHHHHHHHHHHHHHHHHH-HhhhcCCcchhHHHHhhcC--Hhhhhhcc-------
Confidence 7666554321 11249999988877777644 4467789998875211111 11111000
Q ss_pred HHHHHHHHhhccCCCcchhhhhcCCCCCCCCCCCCchhhhhhhhcCCCCCcccccccccccchhhhHhhhccccCCCCCC
Q 005249 214 GEMALLVEGLGIGGETSIEEYIIGPGDELADGEEPTDEKDKIRLYGPEEGLSWVAKPVTGQSSLALVSRQGSLANQSVPL 293 (706)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (706)
++++
T Consensus 267 --------------------------------------~k~~-------------------------------------- 270 (538)
T KOG0252|consen 267 --------------------------------------KKVL-------------------------------------- 270 (538)
T ss_pred --------------------------------------cccc--------------------------------------
Confidence 0000
Q ss_pred CCccccccccccccCCCCCCCCccccCCCCCCccccccccccCCcchhhhhhccCCccccccCCCCCCCCCCcccccccc
Q 005249 294 MDPLVTLFGSVHEKLPESGSMRSTLFPTFGSMFSTAEHHVKHDHWDEESLQREGEDHASDIAGADSDDNLHSPLISRQTT 373 (706)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 373 (706)
+.+.++| +. .++
T Consensus 271 -----------------------------------------~~~~~~~-------~~--------~~~------------ 282 (538)
T KOG0252|consen 271 -----------------------------------------SVDIEAE-------ST--------AES------------ 282 (538)
T ss_pred -----------------------------------------ccccchh-------hc--------ccc------------
Confidence 0000000 00 000
Q ss_pred ccccccCCCCCCCcccccccccccccCCCccccccccCCCcccccchhhcccCCCcccCCccceeecccCCCCCCCCccc
Q 005249 374 SMEKDMAAPPSHGSILSMRRHSSLMQGSGEAVGSTGIGGGWQLAWKWTEREGEDGKKEGGFKRIYLHQEGVPGSRRGSLV 453 (706)
Q Consensus 374 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 453 (706)
| .+|
T Consensus 283 ----~-~~~----------------------------------------------------------------------- 286 (538)
T KOG0252|consen 283 ----D-VPP----------------------------------------------------------------------- 286 (538)
T ss_pred ----C-CCC-----------------------------------------------------------------------
Confidence 0 000
Q ss_pred ccCCCCCCccchHHHHHHHhhchhhhhhhhhccCCCCCCcCCCCccccCCCchHHHHhhhhhhHHHHHHHHHHHHhhhhh
Q 005249 454 SVPGYDVPEEGEYIQAAALVSQPALYSKELMDQHPVGPAMVHPSETASKGPSWAALLEAGVKRALLVGVGIQILQQFSGI 533 (706)
Q Consensus 454 ~~~~~~~~~~g~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 533 (706)
++++.+ .+-.++....-+.++..+..++..-. .+
T Consensus 287 --------------------------------------------~~~~~~-~F~~~f~~~hg~~Llgt~~~WFllDi-af 320 (538)
T KOG0252|consen 287 --------------------------------------------PSNSFG-LFSRLFLRWHGKHLLGTAGTWFLLDI-AF 320 (538)
T ss_pred --------------------------------------------cccccc-hHHHHHHHHHHHHHHHHHHHHHhhhh-hh
Confidence 000111 12223322234455555555555443 34
Q ss_pred hhhHhcHHHHHHhhhh-------------------------------HHHHHhhhcchHHHHhHHHHHHHHHHHHHHHhh
Q 005249 534 NGVLYYTPQILEQAGV-------------------------------AMKLMDVAGRRKLLLTTIPVLIVSLIILVISET 582 (706)
Q Consensus 534 ~~~~~~~~~~~~~~g~-------------------------------~~~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~ 582 (706)
+....+...|++..|+ +.+++|+.|||+..+.+++++++..+++++...
T Consensus 321 y~~nL~~s~I~~~ig~~~~~~~~~~~~~vA~~~~iia~~~~vPGyw~tv~~id~iGRk~iq~~GF~~~~i~~~~~~~~y~ 400 (538)
T KOG0252|consen 321 YGQNLFQSVIFSAIGVIPSANTYHELFKVAEGNLIIAVCSTVPGYWFTVYFIDIIGRKYIQLMGFFIMTIFFFVIAGPYN 400 (538)
T ss_pred hccccHHHHHHHhhccCCCcchHHHHHHHHHHHHHHHHHccCCceeEEEEEeehhhhHHHHHhhHHHHHHHHHHHcCCcc
Confidence 5566666777765544 677899999999999999999999888877654
Q ss_pred hhhhhhhHHHHHHHHHHHHHHHHhhcccccchhhhhcccCCcchhhhHHHHHHHHHHHHHHHHHhHHHHHHH-----hhc
Q 005249 583 LQLISPVLKAGISTACVIIYFCCFVAAYGPIPNILCAEIFPTKVRGICIAICAMAYWICDIIVTYTLPVMLS-----SIG 657 (706)
Q Consensus 583 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~~~~i~~~~~~~~~~-----~~g 657 (706)
.. . +....+++..+.+++..+|-+....++.+|+||+++|+++.|++.+++-+|.+++.+.+....+ ..|
T Consensus 401 ~~----~-~~~Gf~v~y~l~~ff~NFGPn~ttfivpaE~FParvR~t~hGIsAA~GK~GAivg~~~F~~~t~~~yp~~~g 475 (538)
T KOG0252|consen 401 QL----E-NTIGFVVLYSLTFFFGNFGPNATTFIVPAEIFPARVRSTCHGISAASGKAGAIVGAFGFLYLTDHNYPPNIG 475 (538)
T ss_pred cc----c-ccCceeehHHHHHHHHhcCCCceeEEeehhhchHHHhhhhhhHHHHhccchHHHHHHHhhHhhhccCCcccc
Confidence 21 1 2222233344444444555566777889999999999999999999999999999999999999 789
Q ss_pred hhhHHHHHHHHHHHHHHHHHhcccCCCCCChHHHHHHHHcCc
Q 005249 658 LAGAFGVYAVVCFISWVFVFLRVPETKGMPLEVITEFFAVGA 699 (706)
Q Consensus 658 ~~~~~~~~~~~~~~~~~~~~~~~~et~~~~~~~~~~~~~~~~ 699 (706)
.+.+|++++++++++.++.++ +||||++++|++++..+...
T Consensus 476 ~~~v~~i~~~~~~~gi~~T~l-~pEtk~~~leei~~e~~~~~ 516 (538)
T KOG0252|consen 476 VRNVFIILAGCMLLGILFTLL-IPETKGKSLEEISNEEESNG 516 (538)
T ss_pred chHHHHHHHHHHHHhHheeEE-eecccccCHHHhcChhhccc
Confidence 999999999999999888766 78999999999976654433
No 27
>TIGR00895 2A0115 benzoate transport.
Probab=99.96 E-value=2.9e-26 Score=243.61 Aligned_cols=186 Identities=27% Similarity=0.337 Sum_probs=165.0
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhCChHHHHHHHHHHH
Q 005249 3 GAALVAIAATIGNFLQGWDNATIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYF 82 (706)
Q Consensus 3 r~~liliil~L~~fl~gl~~~iis~~lp~I~q~fGLS~s~igLl~S~~~Ig~~Igsl~~G~LaDR~GRRrvLlig~iL~a 82 (706)
+.+..+..+++.++..+++....++..|.+.+++|++..+.+++.+++.++.+++.++.|+++||+|||+++.++.++.+
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~ 93 (398)
T TIGR00895 14 YQWRAIILSFLIMLMDGYDLAAMGFAAPAISAEWGLDPVQLGFLFSAGLIGMAFGALFFGPLADRIGRKRVLLWSILLFS 93 (398)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhhHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHHhHHHHHHhhhHHHHHHHHHHHH
Confidence 34556666777788888888888889999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhhhHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCcchhhHHhHHHHHHHHHHHHHHHHHHHHHHHhccchhh
Q 005249 83 VSGLVMLWSPNVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSWR 162 (706)
Q Consensus 83 Igsll~a~a~s~~lLli~R~L~GIg~G~~~~~~~a~IsE~fP~k~Rg~a~Gi~~ag~~LG~alg~ll~~~l~l~~~~GWR 162 (706)
++.+++.++++++.+++.|++.|++.+...+...+++.|++|+++|++++++...+..+|.++++..... .....+|+
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~--l~~~~g~~ 171 (398)
T TIGR00895 94 VFTLLCALATNVTQLLILRFLAGLGLGGLMPNLNALVSEYAPKRFRGTAVGLMFCGYPIGAAVGGFLAGW--LIPVFGWR 171 (398)
T ss_pred HHHHHHHHccchHHHHHHHHHHhcccccchhhHHHHHHHHcCHHhhchhHhhHhhHHHHHHHHHHHHHHH--Hhhcccce
Confidence 9999999999999999999999999999999999999999999999999999999999999998655433 34567999
Q ss_pred HHHHHHHHHHHHHHHHHHhhccCCchhh
Q 005249 163 LMLGVLSIPALLYFAFAVFFLPESPRWL 190 (706)
Q Consensus 163 ~~FlI~ail~LV~~ll~~lflpEsp~~l 190 (706)
+.|++.+++.++..++.++++||+|++.
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (398)
T TIGR00895 172 SLFYVGGIAPLLLLLLLMRFLPESIDFL 199 (398)
T ss_pred eehhhhhhHHHHHHHHHHHhCCCCChHH
Confidence 9999987777776777778889987654
No 28
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=99.96 E-value=1.3e-25 Score=252.76 Aligned_cols=185 Identities=17% Similarity=0.163 Sum_probs=169.1
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhCChHHHHHHHHH
Q 005249 1 MNGAALVAIAATIGNFLQGWDNATIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVL 80 (706)
Q Consensus 1 ~~r~~liliil~L~~fl~gl~~~iis~~lp~I~q~fGLS~s~igLl~S~~~Ig~~Igsl~~G~LaDR~GRRrvLlig~iL 80 (706)
|.|.|++++.++++.++..++.++++..+|.+.+++|.+.++.+|+.+.|.++++++.+++|+++||+|||++++++.++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~ld~tiv~~a~p~i~~~l~~s~~~~~~~~~~~~l~~~~~~~~~G~l~D~~Grk~~l~~~~~~ 80 (495)
T PRK14995 1 MFRQWLTLVIIVLVYIPVAIDATVLHVAAPTLSMTLGASGNELLWIIDIYSLVMAGMVLPMGALGDRIGFKRLLMLGGTL 80 (495)
T ss_pred CchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHH
Confidence 56788899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhhhHHHHHHHHHHHHHHHHhHHHHHHHHHHhcC-CcchhhHHhHHHHHHHHHHHHHHHHHHHHHHHhccc
Q 005249 81 YFVSGLVMLWSPNVYVLCIARLLDGFGVGLAVTLVPLYISETA-PSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASP 159 (706)
Q Consensus 81 ~aIgsll~a~a~s~~lLli~R~L~GIg~G~~~~~~~a~IsE~f-P~k~Rg~a~Gi~~ag~~LG~alg~ll~~~l~l~~~~ 159 (706)
+.+++++++++++++.++++|+++|++.+...+.....+.+++ |+++|++++|++.....+|.++|+.+.. ...+..
T Consensus 81 ~~~~~~~~~~a~~~~~li~~r~l~G~g~~~~~~~~~~~l~~~~~~~~~r~~~~g~~~~~~~~g~~~gp~lgg--~l~~~~ 158 (495)
T PRK14995 81 FGLASLAAAFSPTASWLIATRALLAIGAAMIVPATLAGIRATFTEEKQRNMALGVWAAVGSGGAAFGPLVGG--ILLEHF 158 (495)
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHH--HhhccC
Confidence 9999999999999999999999999999999888888887776 6789999999999999999999965544 445667
Q ss_pred hhhHHHHHHHHHHHHHHHHHHhhccCCc
Q 005249 160 SWRLMLGVLSIPALLYFAFAVFFLPESP 187 (706)
Q Consensus 160 GWR~~FlI~ail~LV~~ll~~lflpEsp 187 (706)
+||+.|++...++++.+++..+++|+.|
T Consensus 159 gwr~~f~i~~~~~~~~~~l~~~~l~~~~ 186 (495)
T PRK14995 159 YWGSVFLINVPIVLVVMGLTARYVPRQA 186 (495)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHhCCCCC
Confidence 9999999988888887777777888764
No 29
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=99.96 E-value=8.7e-26 Score=247.10 Aligned_cols=180 Identities=23% Similarity=0.282 Sum_probs=172.1
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhCChHHHHHHHHHHH
Q 005249 3 GAALVAIAATIGNFLQGWDNATIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYF 82 (706)
Q Consensus 3 r~~liliil~L~~fl~gl~~~iis~~lp~I~q~fGLS~s~igLl~S~~~Ig~~Igsl~~G~LaDR~GRRrvLlig~iL~a 82 (706)
..+..++.+.++.|..+....+....+|.+.+|+++|..+.|++.|+|.+++.+++++...+.||+.||++++..+.++.
T Consensus 10 ~~~~~l~aLa~~~F~igttEfv~~gLLp~iA~dl~vs~~~aG~lis~yAl~~ai~ap~l~~lt~r~~Rr~lLl~~l~lFi 89 (394)
T COG2814 10 PMWLALLALALAAFAIGTTEFVPVGLLPPIAADLGVSEGAAGQLITAYALGVALGAPLLALLTGRLERRRLLLGLLALFI 89 (394)
T ss_pred cchHHHHHHHHHHHHHHhHHHHHHhchHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcccchHHHHHHHHHHHH
Confidence 45677888999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhhhHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCcchhhHHhHHHHHHHHHHHHHHHHHHHHHHHhccchhh
Q 005249 83 VSGLVMLWSPNVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSWR 162 (706)
Q Consensus 83 Igsll~a~a~s~~lLli~R~L~GIg~G~~~~~~~a~IsE~fP~k~Rg~a~Gi~~ag~~LG~alg~ll~~~l~l~~~~GWR 162 (706)
++++++++++||+.++++|++.|++.|..++...++..+..|+++|++++++...+..++.++| ++.+.++.+..|||
T Consensus 90 ~~n~l~alAp~f~~Ll~aR~~~g~a~G~f~~i~~~~a~~lvpp~~~~~Aiaiv~~G~tlA~v~G--vPLGt~ig~~~GWR 167 (394)
T COG2814 90 VSNLLSALAPSFAVLLLARALAGLAHGVFWSIAAALAARLVPPGKRGRALALVFTGLTLATVLG--VPLGTFLGQLFGWR 167 (394)
T ss_pred HHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccchhhHHHHHHHHHHHHHHHh--ccHHHHHHHHhhHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999 66677777888999
Q ss_pred HHHHHHHHHHHHHHHHHHhhcc
Q 005249 163 LMLGVLSIPALLYFAFAVFFLP 184 (706)
Q Consensus 163 ~~FlI~ail~LV~~ll~~lflp 184 (706)
..|.+.+.++++.++..+..+|
T Consensus 168 ~~F~~ia~l~ll~~~~~~~~lP 189 (394)
T COG2814 168 ATFLAIAVLALLALLLLWKLLP 189 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHhCC
Confidence 9999999999999988888888
No 30
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.96 E-value=6.8e-26 Score=247.30 Aligned_cols=166 Identities=17% Similarity=0.240 Sum_probs=140.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhCChHHHHHHHHHHHHHH
Q 005249 6 LVAIAATIGNFLQGWDNATIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSG 85 (706)
Q Consensus 6 liliil~L~~fl~gl~~~iis~~lp~I~q~fGLS~s~igLl~S~~~Ig~~Igsl~~G~LaDR~GRRrvLlig~iL~aIgs 85 (706)
.....++++.+..... ..+++.+|.+++++|++..+.+++.+++.+++.+++++.|+++||+|||+++..+.++++++.
T Consensus 10 ~~~~~~~~~~~~~~~~-~~~~~~lp~i~~~~~~s~~~~g~~~s~~~~~~~l~~~~~g~l~dr~G~r~~l~~~~~l~~~~~ 88 (393)
T PRK09705 10 MLLVLVLIGLNMRPLL-TSVGPLLPQLRQASGMSFSVAALLTALPVVTMGGLALAGSWLHQHVSERRSVAISLLLIAVGA 88 (393)
T ss_pred HHHHHHHHHHHcchhh-hccchhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHhCchHHHHHHHHHHHHHH
Confidence 3344444444433332 556789999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhhhHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCcchhhHHhHHHHHHHHHHHHHHHHHHHHHHHhccchhhHHH
Q 005249 86 LVMLWSPNVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSWRLML 165 (706)
Q Consensus 86 ll~a~a~s~~lLli~R~L~GIg~G~~~~~~~a~IsE~fP~k~Rg~a~Gi~~ag~~LG~alg~ll~~~l~l~~~~GWR~~F 165 (706)
++++++++++.++++|++.|++.+...+....++.+++| ++|+++++++..+..+|..+++.+..... ....+||+.+
T Consensus 89 ~~~~~a~~~~~ll~~r~l~Gig~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~g~~~~~~l~-~~~~~w~~~~ 166 (393)
T PRK09705 89 LMRELYPQSALLLSSALLGGVGIGIIQAVMPSVIKRRFQ-QRTPLVMGLWSAALMGGGGLGAAITPWLV-QHSETWYQTL 166 (393)
T ss_pred HHHHHCcchHHHHHHHHHHHhHHHHHhhhhhHHHHHHcc-ccchhHHHHHHHHHHHHHHHHHHHHHHHH-HhcCCHHHHH
Confidence 999999999999999999999999999999999999997 77999999999999999988866554332 1223899988
Q ss_pred HHHHHHHHH
Q 005249 166 GVLSIPALL 174 (706)
Q Consensus 166 lI~ail~LV 174 (706)
.+.++..++
T Consensus 167 ~~~~~~~~~ 175 (393)
T PRK09705 167 AWWALPAVV 175 (393)
T ss_pred HHHHHHHHH
Confidence 777666544
No 31
>PRK15075 citrate-proton symporter; Provisional
Probab=99.96 E-value=7e-26 Score=250.03 Aligned_cols=167 Identities=20% Similarity=0.275 Sum_probs=139.5
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChhHHHHH-HHHHH-----HHHHHHHHHHHHHhhhhCChHHHHHH
Q 005249 4 AALVAIAATIGNFLQGWDNATIAGAIVYIKKDLNLGTTVEGLV-VAMSL-----IGATAITTCSGPISDWLGRRPMLILS 77 (706)
Q Consensus 4 ~~liliil~L~~fl~gl~~~iis~~lp~I~q~fGLS~s~igLl-~S~~~-----Ig~~Igsl~~G~LaDR~GRRrvLlig 77 (706)
++.....++++.+++++|+..++...|.+.++++.+..+.+.+ .+... ++..+++++.|+++||+|||++++.+
T Consensus 13 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr~~l~~~ 92 (434)
T PRK15075 13 KARAILRVTSGNFLEMFDFFLFGFYATAIAKTFFPAGNEFASLMLTFAVFGAGFLMRPLGAIVLGAYIDRVGRRKGLIVT 92 (434)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHhhhHHHHHHHHhhhhchHHHHHHH
Confidence 4557888899999999999999999999999999988765433 33322 22347889999999999999999999
Q ss_pred HHHHHHHHHHHHhhhhHH--------HHHHHHHHHHHHHHhHHHHHHHHHHhcCCcchhhHHhHHHHHHHHHHHHHHHHH
Q 005249 78 SVLYFVSGLVMLWSPNVY--------VLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCM 149 (706)
Q Consensus 78 ~iL~aIgsll~a~a~s~~--------lLli~R~L~GIg~G~~~~~~~a~IsE~fP~k~Rg~a~Gi~~ag~~LG~alg~ll 149 (706)
.++++++.++++++++++ .++++|++.|++.+...+....+++|++|+++|++++++...+.++|..+++.+
T Consensus 93 ~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~rg~~~~~~~~~~~~g~~~g~~~ 172 (434)
T PRK15075 93 LSIMASGTLLIAFVPGYATIGLAAPLLVLLGRLLQGFSAGVELGGVSVYLAEIATPGRKGFYTSWQSASQQVAVVFAALL 172 (434)
T ss_pred HHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHhhccccccHHHHHHHHHhhCCcccchHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999877 468889999999999999899999999999999999999999888888877655
Q ss_pred HHHHHH------hccchhhHHHHHHHH
Q 005249 150 VFGMSL------LASPSWRLMLGVLSI 170 (706)
Q Consensus 150 ~~~l~l------~~~~GWR~~FlI~ai 170 (706)
...... ....|||+.|++..+
T Consensus 173 g~~l~~~~~~~~~~~~gWr~~f~~~~~ 199 (434)
T PRK15075 173 GYLLNQWLSPAQMAEWGWRIPFLIGCL 199 (434)
T ss_pred HHHHHHhCCHHHHhccchHHHHHHHHH
Confidence 544321 246799999987443
No 32
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.95 E-value=8.8e-25 Score=236.89 Aligned_cols=177 Identities=16% Similarity=0.223 Sum_probs=156.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhCChHHHHHHHHHHHHHHHH
Q 005249 8 AIAATIGNFLQGWDNATIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLV 87 (706)
Q Consensus 8 liil~L~~fl~gl~~~iis~~lp~I~q~fGLS~s~igLl~S~~~Ig~~Igsl~~G~LaDR~GRRrvLlig~iL~aIgsll 87 (706)
+..+.++.+..+.......+.+|.+.+++|++..+.+++.+++.++++++++++|+++||+|||+++.++.++.+++.++
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~l 84 (382)
T PRK10091 5 ILSLALGTFGLGMAEFGIMGVLTELAHDVGISIPAAGHMISYYALGVVVGAPIIALFSSRYSLKHILLFLVALCVIGNAM 84 (382)
T ss_pred HHHHHHHHHHHHhhHHHHHhChHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHHccCccHHHHHHHHHHHHHHHHH
Confidence 34556677778888888889999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhhhHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCcchhhHHhHHHHHHHHHHHHHHHHHHHHHHHhccchhhHHHHH
Q 005249 88 MLWSPNVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSWRLMLGV 167 (706)
Q Consensus 88 ~a~a~s~~lLli~R~L~GIg~G~~~~~~~a~IsE~fP~k~Rg~a~Gi~~ag~~LG~alg~ll~~~l~l~~~~GWR~~FlI 167 (706)
++++++++.+++.|++.|++.+...+....++.+++|+++|++++++...+..+|..+++.... ......+||+.|++
T Consensus 85 ~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~--~l~~~~gwr~~f~~ 162 (382)
T PRK10091 85 FTLSSSYLMLAIGRLVSGFPHGAFFGVGAIVLSKIIKPGKVTAAVAGMVSGMTVANLLGIPLGT--YLSQEFSWRYTFLL 162 (382)
T ss_pred HHHhCcHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCChHHhhHHHHHHHHHHHHHHHHhccHHH--HHhhhccHHHHHHH
Confidence 9999999999999999999999988888899999999999999999999999999999855433 33455699999999
Q ss_pred HHHHHHHHHHHHHhhccCC
Q 005249 168 LSIPALLYFAFAVFFLPES 186 (706)
Q Consensus 168 ~ail~LV~~ll~~lflpEs 186 (706)
.+++.++..+..++++||.
T Consensus 163 ~~~~~~~~~~~~~~~lp~~ 181 (382)
T PRK10091 163 IAVFNIAVLASIYFWVPDI 181 (382)
T ss_pred HHHHHHHHHHHHHHhCCCC
Confidence 9988777666555667765
No 33
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.95 E-value=1.3e-24 Score=235.26 Aligned_cols=168 Identities=18% Similarity=0.200 Sum_probs=141.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhCChHHHHHHHHHHHH
Q 005249 5 ALVAIAATIGNFLQGWDNATIAGAIVY-IKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFV 83 (706)
Q Consensus 5 ~liliil~L~~fl~gl~~~iis~~lp~-I~q~fGLS~s~igLl~S~~~Ig~~Igsl~~G~LaDR~GRRrvLlig~iL~aI 83 (706)
..-+..+++..++..++..+..+.+|. +.+++|.+..+.+++.+++.+++++++++.|+++||+|||+++.++.++.++
T Consensus 14 ~~~~~~l~~~~~~~~~~~~~~~~~l~~~i~~~~g~s~~~~g~~~~~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~~~ 93 (399)
T PRK05122 14 TLRIVSIVMFTFISYLTIGLPLAVLPGYVHDQLGFSAFLAGLVISLQYLATLLSRPHAGRYADTLGPKKAVVFGLCGCAL 93 (399)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHhchhhHhHHhccCCcchHHHHHHHHHH
Confidence 344556777888888888888888886 6788999999999999999999999999999999999999999999998888
Q ss_pred HHHHHHhh--------hhHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCcchhhHHhHHHHHHHHHHHHHHHHHHHHHHH
Q 005249 84 SGLVMLWS--------PNVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSL 155 (706)
Q Consensus 84 gsll~a~a--------~s~~lLli~R~L~GIg~G~~~~~~~a~IsE~fP~k~Rg~a~Gi~~ag~~LG~alg~ll~~~l~l 155 (706)
+.+++.++ .+++.+++.|++.|++.+...+....++.|++|+++|++++++...+..+|.++++..... .
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~--l 171 (399)
T PRK05122 94 SGLLYLLAGLLAAWPVLSLLLLLLGRLLLGIGESLAGTGSILWGIGRVGALHTGRVISWNGIATYGALAIGAPLGVL--L 171 (399)
T ss_pred HHHHHHHhhhhhccchhHHHHHHHHHHHHHhhHHhhcchHHHHHHhhcChhhhccchhhhhhhhhHHHHHHHHHHHH--H
Confidence 77666543 2567889999999999999999999999999999999999999999999999888555433 3
Q ss_pred hccchhhHHHHHHHHHHHH
Q 005249 156 LASPSWRLMLGVLSIPALL 174 (706)
Q Consensus 156 ~~~~GWR~~FlI~ail~LV 174 (706)
....||+..+++.+++.++
T Consensus 172 ~~~~g~~~~~~~~~~~~~~ 190 (399)
T PRK05122 172 YHWGGLAGLGLLIMLLALL 190 (399)
T ss_pred HHcccHHHHHHHHHHHHHH
Confidence 4466999988776655443
No 34
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.95 E-value=1.8e-25 Score=247.12 Aligned_cols=183 Identities=16% Similarity=0.119 Sum_probs=154.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhCChHHHHHHHHHHHH
Q 005249 4 AALVAIAATIGNFLQGWDNATIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFV 83 (706)
Q Consensus 4 ~~liliil~L~~fl~gl~~~iis~~lp~I~q~fGLS~s~igLl~S~~~Ig~~Igsl~~G~LaDR~GRRrvLlig~iL~aI 83 (706)
.+..+..+.+.+...+.++..+....|.+.+ +|++.++.+++.+++.++++++++++|+++||+|||+++.++.++.++
T Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~~~~~~~~~~~~~~ 103 (438)
T TIGR00712 25 RWQVFLGIFFGYAAYYLVRKNFALAMPYLVE-QGFSKGELGFALSAISIAYGFSKFIMGSVSDRSNPRVFLPAGLILSAA 103 (438)
T ss_pred HHHHHHHHHHHHHHHHHHhccHHhhhHHHHH-cCCCHhHhHHHHHHHHHHHHHhhhccchhhhccCCceehHHHHHHHHH
Confidence 3455666667777777777777777887776 699999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhh----hhHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCcchhhHHhHHHHHHHHHHHHHHHHHHHHHHHhccc
Q 005249 84 SGLVMLWS----PNVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASP 159 (706)
Q Consensus 84 gsll~a~a----~s~~lLli~R~L~GIg~G~~~~~~~a~IsE~fP~k~Rg~a~Gi~~ag~~LG~alg~ll~~~l~l~~~~ 159 (706)
+.+++++. ++++.+++.|++.|++.+..++....++.|++|+++|++++++.+.+..+|.++++.+..... ....
T Consensus 104 ~~~~~~~~~~~~~~~~~l~~~~~l~g~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~~~~~l~~~~~-~~~~ 182 (438)
T TIGR00712 104 VMLLMGFVPWATSSIAIMFVLLFLNGWFQGMGWPPCGRTMVHWWSQSERGTIVSIWNCAHNIGGGIPPLLVLLGM-AWFN 182 (438)
T ss_pred HHHHHhccccccchHHHHHHHHHHHHHHhhcchHHHHHHHHHhcCcccchhHHHHHHHHHHhHhHHHHHHHHHHH-HHhh
Confidence 98887764 467788889999999999998888899999999999999999999999999888755443222 2235
Q ss_pred hhhHHHHHHHHHHHHHHHHHHhhccCCch
Q 005249 160 SWRLMLGVLSIPALLYFAFAVFFLPESPR 188 (706)
Q Consensus 160 GWR~~FlI~ail~LV~~ll~~lflpEsp~ 188 (706)
+||..|++.++++++..++.++++||+|+
T Consensus 183 ~w~~~f~~~~~~~~i~~~~~~~~~~~~~~ 211 (438)
T TIGR00712 183 DWHAALYFPAICAIIVALFAFAMMRDTPQ 211 (438)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHhccCCHH
Confidence 89999999999888877777777888753
No 35
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=99.95 E-value=3.7e-25 Score=249.81 Aligned_cols=169 Identities=28% Similarity=0.464 Sum_probs=146.5
Q ss_pred HHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhCChHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhHHH
Q 005249 34 KDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVMLWSPNVYVLCIARLLDGFGVGLAVT 113 (706)
Q Consensus 34 q~fGLS~s~igLl~S~~~Ig~~Igsl~~G~LaDR~GRRrvLlig~iL~aIgsll~a~a~s~~lLli~R~L~GIg~G~~~~ 113 (706)
+.+..+.....+..+++.+|.++|++++|.++||+|||++++.+.++.+++.++.++++|++.+++.|++.|++.++...
T Consensus 111 ~~~c~~~~~~~~~~s~~~~G~~vG~~i~g~lsD~~GRk~~~~~~~~~~~i~~~~~a~a~~~~~~~~~Rfl~G~~~~~~~~ 190 (521)
T KOG0255|consen 111 NLVCDSSTLVALGQSLFFLGVLVGSLIFGPLSDRFGRKPVLLVSLLLFIIFGILTAFAPNYWMFLIFRFLSGFFGSGPLT 190 (521)
T ss_pred ceeeCcHhHHHHHHHHHHHHHHHHHhhheehHhhcccHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhccchhH
Confidence 45667788899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCcchhhHHhHHHHHHHHHHHHHHHHHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHhhccCCchhhhcc
Q 005249 114 LVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSWRLMLGVLSIPALLYFAFAVFFLPESPRWLVSK 193 (706)
Q Consensus 114 ~~~a~IsE~fP~k~Rg~a~Gi~~ag~~LG~alg~ll~~~l~l~~~~GWR~~FlI~ail~LV~~ll~~lflpEsp~~l~~k 193 (706)
....+++|++++++|+.++.+ ..+...+..+++... .+... +||+.+++..+++++.+++ +++.+|+|||+..+
T Consensus 191 ~~~~~~~E~~~~~~R~~~~~~-~~~~~~~~~~~~~~~--a~~~~--~Wr~~~~~~~~~~~~~~~~-~~l~~Es~rwl~~~ 264 (521)
T KOG0255|consen 191 VGFGLVAEIVSPKQRGLALTL-GGFFFVGGLMLPAGA--AYITR--DWRWLFWIISIPSGLFLLL-WFLPPESPRWLLSK 264 (521)
T ss_pred HhHhhheeecCcchhhHHHHH-HHHHHHHHHHHHHHH--HHHHh--hHHHHHHHHHHHHHHHHHH-HHccCcChHHHHHc
Confidence 999999999999999999999 555555555543222 22222 9999999999998886655 66677999999999
Q ss_pred cchHHHHHHHHHhhc
Q 005249 194 GKMLEAKQVLQRLRG 208 (706)
Q Consensus 194 ~~~~~~~~~~~~~~~ 208 (706)
++.+++.+.+++...
T Consensus 265 g~~~~a~~~l~~~a~ 279 (521)
T KOG0255|consen 265 GRIDEAIKILKKIAK 279 (521)
T ss_pred CchHHHHHHHHHHHh
Confidence 999999888877644
No 36
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=99.95 E-value=2.9e-25 Score=246.51 Aligned_cols=185 Identities=16% Similarity=0.215 Sum_probs=163.2
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----------------------HcCCChhHHHHHHHHHHHHHHHHHH
Q 005249 2 NGAALVAIAATIGNFLQGWDNATIAGAIVYIKK----------------------DLNLGTTVEGLVVAMSLIGATAITT 59 (706)
Q Consensus 2 ~r~~liliil~L~~fl~gl~~~iis~~lp~I~q----------------------~fGLS~s~igLl~S~~~Ig~~Igsl 59 (706)
+.++.++.++++++.+++.++..++...+.+.+ +++++..+.|++.+++.++++++++
T Consensus 15 ~~r~~i~~~~~~~~~~~y~dr~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~ 94 (465)
T TIGR00894 15 SFRLFLSFLLHICNVIIIAQRICLSLTMVAMVNKENSTDLACLSAENELDNIKNPNFKWSGALQGLILSSHFYGQIIIQI 94 (465)
T ss_pred CcHHHHHHHHHHHHHHHHHHHhhheEEEEEcccCCCCCCccccccccccccccCCCCCCCHHHhhHHHHHHHHHHHHHHc
Confidence 356778888899999999999999988887776 7899999999999999999999999
Q ss_pred HHHHHhhhhCChHHHHHHHHHHHHHHHHHHhh--hhHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCcchhhHHhHHHHH
Q 005249 60 CSGPISDWLGRRPMLILSSVLYFVSGLVMLWS--PNVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQF 137 (706)
Q Consensus 60 ~~G~LaDR~GRRrvLlig~iL~aIgsll~a~a--~s~~lLli~R~L~GIg~G~~~~~~~a~IsE~fP~k~Rg~a~Gi~~a 137 (706)
++|+++||+|||+++.++.++++++.+++.++ .+++.+++.|++.|++.+...+....++.||+|+++|++++++...
T Consensus 95 ~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 174 (465)
T TIGR00894 95 PVGYLAGKYVFKWSIGIGMFLSSVISIVIPWAAGGGIALVVFCRVIQGLAQGSVSPATHKIIVKWAPPKERSRLLGMSTS 174 (465)
T ss_pred chHHHHHHhCcchhhHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHhcccchhhHHHHHHhcCCHHHHHHHHHHHHH
Confidence 99999999999999999999999998887554 5688899999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhcc-chhhHHHHHHHHHHHHHHHHHHhhccCCch
Q 005249 138 TGSGGMFLAYCMVFGMSLLAS-PSWRLMLGVLSIPALLYFAFAVFFLPESPR 188 (706)
Q Consensus 138 g~~LG~alg~ll~~~l~l~~~-~GWR~~FlI~ail~LV~~ll~~lflpEsp~ 188 (706)
+..+|.++++.+.... ... .+||+.|++.++++++..++.+++.+|+|+
T Consensus 175 ~~~~g~~i~~~l~~~l--~~~~~gw~~~f~i~~~~~~~~~~~~~~~~~~~p~ 224 (465)
T TIGR00894 175 GFQLGTFIFLPISGWL--CESWGGWPMIFYVFGIVGCAWSLLWFVFPADDPS 224 (465)
T ss_pred HHHHHHHHHHHHHHHH--HhccCCCCeehhhhhHHHHHHHHHHHHHhcCCcc
Confidence 9999999996665433 345 499999999999888877776677777764
No 37
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.95 E-value=1.6e-25 Score=235.80 Aligned_cols=174 Identities=20% Similarity=0.209 Sum_probs=155.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhCChHHHHHHHHHHHHHHHHHHhhh
Q 005249 13 IGNFLQGWDNATIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVMLWSP 92 (706)
Q Consensus 13 L~~fl~gl~~~iis~~lp~I~q~fGLS~s~igLl~S~~~Ig~~Igsl~~G~LaDR~GRRrvLlig~iL~aIgsll~a~a~ 92 (706)
++++..++++..++...|.+.+++|++..+.+++.+++.++++++++++|+++||+|||+++.++.++.+++.+++++++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~ 81 (379)
T TIGR00881 2 IGYAAYYLVRKNFALAMPYLVEEIGLSKTDLGLLLSSFSIAYGISKFVMGSVSDRSNPRVFLPIGLILCAIVNLFFGFST 81 (379)
T ss_pred chhhHHHHhHHhhhhhhHHHHHHhCCCHhHHHHHHHHHHHHHHhhhhhhhHHHHhhCCeehhHHHHHHHHHHHHHHHHhh
Confidence 35677888899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCcchhhHHhHHHHHHHHHHHHHHHHHHHHHHHhccchhhHHHHHHHHHH
Q 005249 93 NVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSWRLMLGVLSIPA 172 (706)
Q Consensus 93 s~~lLli~R~L~GIg~G~~~~~~~a~IsE~fP~k~Rg~a~Gi~~ag~~LG~alg~ll~~~l~l~~~~GWR~~FlI~ail~ 172 (706)
+++.+++.|++.|++.+...+...+++.|++|+++|++++++.+.+..+|.++++..... ......+||+.|++.+++.
T Consensus 82 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 160 (379)
T TIGR00881 82 SLWVMAALWALNGIFQGMGWPPCGRTVTKWFSRSERGTWVSFWNCSHNVGGGLLPPLVLF-GIAELYSWHWVFIVPGIIA 160 (379)
T ss_pred hHHHHHHHHHHHHhhccccCCchHHHHHHhcCHhhheeeEeehhccchhHHHHHHHHHHH-HHHhcCCchhHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999998632222 2234569999999988888
Q ss_pred HHHHHHHHhhccCCc
Q 005249 173 LLYFAFAVFFLPESP 187 (706)
Q Consensus 173 LV~~ll~~lflpEsp 187 (706)
++..++.+++.+|+|
T Consensus 161 ~~~~~~~~~~~~~~~ 175 (379)
T TIGR00881 161 IIVSLICFLLLRDSP 175 (379)
T ss_pred HHHHHHHheeeCCCc
Confidence 776666667777764
No 38
>PRK12382 putative transporter; Provisional
Probab=99.95 E-value=3.2e-24 Score=232.11 Aligned_cols=164 Identities=15% Similarity=0.181 Sum_probs=135.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH-HHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhCChHHHHHHHHHHHHHH
Q 005249 7 VAIAATIGNFLQGWDNATIAGAIVY-IKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSG 85 (706)
Q Consensus 7 iliil~L~~fl~gl~~~iis~~lp~-I~q~fGLS~s~igLl~S~~~Ig~~Igsl~~G~LaDR~GRRrvLlig~iL~aIgs 85 (706)
.+..+.++.++.........+.+|. +.+++|++..+.|++.+++.++++++++++|+++||+|||++++.+.++..++.
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~p~l~~~l~~~lg~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~ 95 (392)
T PRK12382 16 SLFRIAFAVFLTYMTVGLPLPVIPLFVHHDLGFGNTMVGIAVGIQFLATVLTRGYAGRLADQYGAKRSALQGMLACGLAG 95 (392)
T ss_pred cHHHHHHHHHHHHHHHHHHhhhhhHHHHHhcCCcHHHHHHHHHHHHHHHHHHhhhhhHHHHhhcchHHHHHHHHHHHHHH
Confidence 3445556667777777777788875 678999999999999999999999999999999999999999999888777665
Q ss_pred HHHHh--------hhhHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCcchhhHHhHHHHHHHHHHHHHHHHHHHHHHHhc
Q 005249 86 LVMLW--------SPNVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLA 157 (706)
Q Consensus 86 ll~a~--------a~s~~lLli~R~L~GIg~G~~~~~~~a~IsE~fP~k~Rg~a~Gi~~ag~~LG~alg~ll~~~l~l~~ 157 (706)
+.+.. .++++.++++|++.|++.+...+...+++.+++|+++|++++++.+.+..+|.++++..... ...
T Consensus 96 ~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~a~~~~~~~~~~g~~~g~~~~~~--l~~ 173 (392)
T PRK12382 96 LAYLLAAILPVSAPFKFALLVVGRLILGFGESQLLTGALTWGLGLVGPKHSGKVMSWNGMAMYGALAAGAPLGLL--LHS 173 (392)
T ss_pred HHHHhhhccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCccccchhhhHHHHHHHHHHHHHHHHHHH--HHh
Confidence 43321 35789999999999999999988889999999999999999999999999999998655433 334
Q ss_pred cchhhHHHHHHHHHH
Q 005249 158 SPSWRLMLGVLSIPA 172 (706)
Q Consensus 158 ~~GWR~~FlI~ail~ 172 (706)
..||+..+++..++.
T Consensus 174 ~~g~~~~~~~~~~~~ 188 (392)
T PRK12382 174 HFGFAALALTTMVLP 188 (392)
T ss_pred ccChHHHHHHHHHHH
Confidence 568998776554443
No 39
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.94 E-value=3.5e-24 Score=240.51 Aligned_cols=181 Identities=16% Similarity=0.097 Sum_probs=149.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhCChHHHHHHHHHHHHH
Q 005249 5 ALVAIAATIGNFLQGWDNATIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVS 84 (706)
Q Consensus 5 ~liliil~L~~fl~gl~~~iis~~lp~I~q~fGLS~s~igLl~S~~~Ig~~Igsl~~G~LaDR~GRRrvLlig~iL~aIg 84 (706)
+..+....+..++..+....+.+.+|.+.+++|++..+.+++.+.+.+++.++++++|+++||+|||+++.++.++++++
T Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gls~~~~g~~~~~~~~~~~~~~~~~G~l~dr~G~r~~~~~~~~~~~~~ 114 (476)
T PLN00028 35 MRAFHLSWISFFTCFVSTFAAAPLLPIIRDNLNLTKSDIGNAGIASVSGSIFSRLAMGPVCDLYGPRYGSAFLLMLTAPA 114 (476)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHH
Confidence 44555556666777777777888899999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhhhHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCcchhhHHhHHHHHHHHHHHHHHHHHHHHHHH--hc-----
Q 005249 85 GLVMLWSPNVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSL--LA----- 157 (706)
Q Consensus 85 sll~a~a~s~~lLli~R~L~GIg~G~~~~~~~a~IsE~fP~k~Rg~a~Gi~~ag~~LG~alg~ll~~~l~l--~~----- 157 (706)
.++++++++++.++++|++.|++.+.. .....+++|++|+++|++++++.+.+.++|..+++.+...... ..
T Consensus 115 ~~~~~~~~s~~~l~~~r~l~G~~~~~~-~~~~~~i~~~~~~~~rg~a~g~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~ 193 (476)
T PLN00028 115 VFCMSLVSSATGFIAVRFFIGFSLATF-VSCQYWMSTMFNGKIVGTANGIAAGWGNLGGGVTQLLMPLVFPLIKDAGAPS 193 (476)
T ss_pred HHHHHHhcCHHHHHHHHHHHHHHHHhh-HHHHHHHHHhcChhheeHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcc
Confidence 999999999999999999999998865 3456789999999999999999988877887777554432211 11
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHhhccCC
Q 005249 158 SPSWRLMLGVLSIPALLYFAFAVFFLPES 186 (706)
Q Consensus 158 ~~GWR~~FlI~ail~LV~~ll~~lflpEs 186 (706)
..|||+.|++.++++++..++.+++.++.
T Consensus 194 ~~gWr~~f~i~g~l~l~~~l~~~~~~~~~ 222 (476)
T PLN00028 194 FTAWRIAFFVPGLLHIIMGILVLTLGQDL 222 (476)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHcCcC
Confidence 24899999999998887766655544444
No 40
>PRK03699 putative transporter; Provisional
Probab=99.94 E-value=3.4e-24 Score=233.22 Aligned_cols=175 Identities=13% Similarity=0.096 Sum_probs=154.2
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhCChHHHHHHHHHHH
Q 005249 3 GAALVAIAATIGNFLQGWDNATIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYF 82 (706)
Q Consensus 3 r~~liliil~L~~fl~gl~~~iis~~lp~I~q~fGLS~s~igLl~S~~~Ig~~Igsl~~G~LaDR~GRRrvLlig~iL~a 82 (706)
+++.+.+.+++++++.+.....++..+|.+.+++|++.++.+++.+++.+++.++++++|++.||+|||+++..+.++.+
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~g~r~~~~~~~~~~~ 83 (394)
T PRK03699 4 NRIKLTWISFLSYALTGALVIVTGMVMGPIAEYFNLPVSSMSNTFTFLNAGILISIFLNAWLMEIIPLKRQLIFGFALMI 83 (394)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 44556667788889999988999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhhhHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCcchhhHHhHHHHHHHHHHHHHHHHHHHHHHHhccchhh
Q 005249 83 VSGLVMLWSPNVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSWR 162 (706)
Q Consensus 83 Igsll~a~a~s~~lLli~R~L~GIg~G~~~~~~~a~IsE~fP~k~Rg~a~Gi~~ag~~LG~alg~ll~~~l~l~~~~GWR 162 (706)
++.++++++++++.++++|++.|++.+...+....++.|++|+++|++++++.+.+..+|.++++.+.... .....+||
T Consensus 84 i~~~l~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l-~~~~~gw~ 162 (394)
T PRK03699 84 LAVAGLMFSHSLALFSIAMFVLGVVSGITMSIGTFLITHVYEGKQRGSRLLFTDSFFSMAGMIFPIIAAYL-LARSIEWY 162 (394)
T ss_pred HHHHHHHHcchHHHHHHHHHHHHHhhHhhccchhHHhhhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHH-HhccccHH
Confidence 99999999999999999999999999999888999999999999999999999888888888876544332 23456999
Q ss_pred HHHHHHHHHHHHHHHH
Q 005249 163 LMLGVLSIPALLYFAF 178 (706)
Q Consensus 163 ~~FlI~ail~LV~~ll 178 (706)
+.|.+.+++.++.+++
T Consensus 163 ~~f~~~~~~~~~~~~~ 178 (394)
T PRK03699 163 WVYACIGLVYVAIFIL 178 (394)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9999888877665443
No 41
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.94 E-value=1.8e-24 Score=236.60 Aligned_cols=172 Identities=15% Similarity=0.126 Sum_probs=141.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhCChHHHHHHHHHHHHHHHHHHh-
Q 005249 12 TIGNFLQGWDNATIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVMLW- 90 (706)
Q Consensus 12 ~L~~fl~gl~~~iis~~lp~I~q~fGLS~s~igLl~S~~~Ig~~Igsl~~G~LaDR~GRRrvLlig~iL~aIgsll~a~- 90 (706)
.++.++..+......+.+|.+.++++.+..+.|++.+.+.+++++++++.|+++||+|||+++.++.++.+++.++.+.
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~l~~~~~~~~~G~l~dr~g~~~~l~~~~~~~~~~~~~~~~~ 102 (417)
T PRK10489 23 FIARFISIFGLGLLGVAVPVQIQMMTGSTLQVGLSVTLTGGAMFIGLMVGGVLADRYDRKKLILLARGTCGLGFIGLALN 102 (417)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhhHHHhhhcCCceEEEehHHHHHHHHHHHHHH
Confidence 3445566667777788889999999999999999999999999999999999999999999999888877777665442
Q ss_pred ----hhhHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCcchhhHHhHHHHHHHHHHHHHHHHHHHHHHHhccchhhHHHH
Q 005249 91 ----SPNVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSWRLMLG 166 (706)
Q Consensus 91 ----a~s~~lLli~R~L~GIg~G~~~~~~~a~IsE~fP~k~Rg~a~Gi~~ag~~LG~alg~ll~~~l~l~~~~GWR~~Fl 166 (706)
.++++.++++|++.|++.+...+...+++.+++|+++|+++.++.+.+..+|.++|+.+.... ....+|++.|+
T Consensus 103 ~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~g~l--~~~~~~~~~~~ 180 (417)
T PRK10489 103 AFLPEPSLLAIYLLGLWDGFFGSLGVTALLAATPALVGRENLMQAGAITMLTVRLGSVISPALGGLL--IAAGGVAWNYG 180 (417)
T ss_pred HHcCCCcHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCHHHHHHHHHHHHHHHhHHHHhHHHHHHHH--HHHHhhHHHHH
Confidence 567889999999999999988888899999999999999999999999999999996655443 33458999998
Q ss_pred HHHHHHHHHHHHHHhhccCC
Q 005249 167 VLSIPALLYFAFAVFFLPES 186 (706)
Q Consensus 167 I~ail~LV~~ll~~lflpEs 186 (706)
+.++..++..+ ..+.+|+.
T Consensus 181 ~~~~~~~~~~~-~~~~l~~~ 199 (417)
T PRK10489 181 LAAAGTFITLL-PLLRLPAL 199 (417)
T ss_pred HHHHHHHHHHH-HHHhCCCC
Confidence 87776665443 34555654
No 42
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.94 E-value=1.7e-23 Score=227.81 Aligned_cols=183 Identities=20% Similarity=0.262 Sum_probs=161.6
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhCChHHHHHHHHHH
Q 005249 2 NGAALVAIAATIGNFLQGWDNATIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLY 81 (706)
Q Consensus 2 ~r~~liliil~L~~fl~gl~~~iis~~lp~I~q~fGLS~s~igLl~S~~~Ig~~Igsl~~G~LaDR~GRRrvLlig~iL~ 81 (706)
++.++..+.+.+..++..+....+.+.+|.+.+++|++..+.++..+++.+++++++++.|.++||+|||+++.++.++.
T Consensus 9 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~ 88 (406)
T PRK15402 9 RQALLFPLCLVLFEFATYIANDMIQPGMLAVVEDFNAGAEWVPTSMTAYLAGGMFLQWLLGPLSDRIGRRPVMLAGVAFF 88 (406)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhhHhcchHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHH
Confidence 45677788888888888888898899999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhhHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCcchhhHHhHHHHHHHHHHHHHHHHHHHHHHHhccchh
Q 005249 82 FVSGLVMLWSPNVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSW 161 (706)
Q Consensus 82 aIgsll~a~a~s~~lLli~R~L~GIg~G~~~~~~~a~IsE~fP~k~Rg~a~Gi~~ag~~LG~alg~ll~~~l~l~~~~GW 161 (706)
+++.+++.++++++.+++.|++.|++.+...+....++.|++|+++|.+++++...+..+|..+++...... .+..+|
T Consensus 89 ~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l--~~~~~w 166 (406)
T PRK15402 89 ILTCLAILLAQSIEQFTLLRFLQGIGLCFIGAVGYAAIQESFEEADAIKITALMANVALLAPLLGPLVGAAL--IHVLPW 166 (406)
T ss_pred HHHHHHHHHHccHHHHHHHHHHHHhHhhhHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHccCc
Confidence 999999999999999999999999999998888999999999999999999998888888888885554333 345699
Q ss_pred hHHHHHHHHHHHHHHHHHHhhccCC
Q 005249 162 RLMLGVLSIPALLYFAFAVFFLPES 186 (706)
Q Consensus 162 R~~FlI~ail~LV~~ll~~lflpEs 186 (706)
|+.|++.+++.++.++..++..||+
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (406)
T PRK15402 167 RGMFVLFAALAALSFFGLWRAMPET 191 (406)
T ss_pred cHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 9999998888887666655666765
No 43
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.94 E-value=1.7e-23 Score=223.10 Aligned_cols=174 Identities=24% Similarity=0.317 Sum_probs=153.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhCChHHHHHHHHHHHHHHHHHHh
Q 005249 11 ATIGNFLQGWDNATIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVMLW 90 (706)
Q Consensus 11 l~L~~fl~gl~~~iis~~lp~I~q~fGLS~s~igLl~S~~~Ig~~Igsl~~G~LaDR~GRRrvLlig~iL~aIgsll~a~ 90 (706)
+.+..++..++...+.+..|.+.+++|++..+.+++.+++.++..+++++.|+++||+|||+++.++.++.+++.+++.+
T Consensus 10 ~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~ 89 (385)
T TIGR00710 10 LGCLSILGPLGIDMYLPAFPEIAADLSTPASIVQMTLTLYLLGFAAGQLLWGPLSDRYGRRPVLLLGLFIFALSSLGLAL 89 (385)
T ss_pred HHHHHHHHHHHHHHhcccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHHHHHHHH
Confidence 33444556777788888899999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCcchhhHHhHHHHHHHHHHHHHHHHHHHHHHHhccchhhHHHHHHHH
Q 005249 91 SPNVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSWRLMLGVLSI 170 (706)
Q Consensus 91 a~s~~lLli~R~L~GIg~G~~~~~~~a~IsE~fP~k~Rg~a~Gi~~ag~~LG~alg~ll~~~l~l~~~~GWR~~FlI~ai 170 (706)
+++++.+++.|++.|++.+...+...+++.|++|+++|++++++.+....+|.++++.+... ..+..+||+.|++.++
T Consensus 90 ~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~--l~~~~~~~~~~~~~~~ 167 (385)
T TIGR00710 90 SNNIETLLVLRFVQAFGASAGSVISQALVRDIYPGEELSRIYSILMPVLALAPAVAPLLGGY--ILVWLSWHAIFAFLSL 167 (385)
T ss_pred HccHHHHHHHHHHHHcchhHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHcCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999998655543 3445699999999888
Q ss_pred HHHHHHHHHHhhccCC
Q 005249 171 PALLYFAFAVFFLPES 186 (706)
Q Consensus 171 l~LV~~ll~~lflpEs 186 (706)
+.++..++.+++.||+
T Consensus 168 ~~~~~~~~~~~~~~~~ 183 (385)
T TIGR00710 168 AGILLSALIFFILPET 183 (385)
T ss_pred HHHHHHHHHHHhCCCC
Confidence 8777666666666665
No 44
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.94 E-value=2.5e-23 Score=227.70 Aligned_cols=183 Identities=15% Similarity=0.085 Sum_probs=155.5
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhCChHHHHHHHHHH
Q 005249 2 NGAALVAIAATIGNFLQGWDNATIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLY 81 (706)
Q Consensus 2 ~r~~liliil~L~~fl~gl~~~iis~~lp~I~q~fGLS~s~igLl~S~~~Ig~~Igsl~~G~LaDR~GRRrvLlig~iL~ 81 (706)
|+.|..+..+.+..+..........+.+|.+.+++|++.++.+++.+++.++..+++++.|.++||+|||+++..+.++.
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~grr~~~~~~~~~~ 95 (394)
T PRK10213 16 RPNWSAVFSVAFCVACLIIVEFLPVSLLTPMAQDLGISEGVAGQSVTVTAFVAMFASLFITQTIQATDRRYVVILFAVLL 95 (394)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcHHHHHHHHHHH
Confidence 34566556666665555555555566789999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhhHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCcchhhHHhHHHHHHHHHHHHHHHHHHHHHHHhccchh
Q 005249 82 FVSGLVMLWSPNVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSW 161 (706)
Q Consensus 82 aIgsll~a~a~s~~lLli~R~L~GIg~G~~~~~~~a~IsE~fP~k~Rg~a~Gi~~ag~~LG~alg~ll~~~l~l~~~~GW 161 (706)
+++.++++++++++.++++|++.|++.+...+...+++.|++|+++|++++++...+.++|.++++.+... .....+|
T Consensus 96 ~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~~~--l~~~~gw 173 (394)
T PRK10213 96 TLSCLLVSFANSFSLLLIGRACLGLALGGFWAMSASLTMRLVPPRTVPKALSVIFGAVSIALVIAAPLGSF--LGELIGW 173 (394)
T ss_pred HHHHHHHHHHChHHHHHHHHHHHHHhhHHHHHHHHHHHHHHcCHhHHHHHHHHHHHHHHHHHHHHHHHHHH--HHhhcCH
Confidence 99999999999999999999999999999999999999999999999999999999999999999655543 3456799
Q ss_pred hHHHHHHHHHHHHHHHHHHhhccCC
Q 005249 162 RLMLGVLSIPALLYFAFAVFFLPES 186 (706)
Q Consensus 162 R~~FlI~ail~LV~~ll~~lflpEs 186 (706)
|+.|++.++++++..++.....||.
T Consensus 174 ~~~f~~~~~l~~~~~l~~~~~~p~~ 198 (394)
T PRK10213 174 RNVFNAAAVMGVLCIFWIIKSLPSL 198 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCC
Confidence 9999998877766554444445554
No 45
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.94 E-value=2.6e-23 Score=225.09 Aligned_cols=152 Identities=17% Similarity=0.116 Sum_probs=138.7
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhCChHHHHHHHHH
Q 005249 1 MNGAALVAIAATIGNFLQGWDNATIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVL 80 (706)
Q Consensus 1 ~~r~~liliil~L~~fl~gl~~~iis~~lp~I~q~fGLS~s~igLl~S~~~Ig~~Igsl~~G~LaDR~GRRrvLlig~iL 80 (706)
|++....+..++++.++.......+++.+|.+.+++|+|..+.|++.+++.+++.+++++.|+++||+|||+++.++.++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~s~~~~G~~~s~~~l~~~~~~~~~g~l~dr~g~k~~~~~~~~~ 80 (381)
T PRK03633 1 MSTYTRPVLLLLCGLLLLTLAIAVLNTLVPLWLAQEHLPTWQVGVVSSSYFTGNLVGTLLAGYVIKRIGFNRSYYLASLI 80 (381)
T ss_pred CcHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHH
Confidence 44444456667788888999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhhhHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCcchhhHHhHHHHHHHHHHHHHHHHHHHH
Q 005249 81 YFVSGLVMLWSPNVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFG 152 (706)
Q Consensus 81 ~aIgsll~a~a~s~~lLli~R~L~GIg~G~~~~~~~a~IsE~fP~k~Rg~a~Gi~~ag~~LG~alg~ll~~~ 152 (706)
.+++.++++++++++.++++|++.|++.+...+.....+.+..++++|++++++++.+..+|.++++.+...
T Consensus 81 ~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~ 152 (381)
T PRK03633 81 FAAGCAGLGLMVGFWSWLAWRFVAGIGCAMIWVVVESALMCSGTSRNRGRLLAAYMMVYYLGTVLGQLLVSK 152 (381)
T ss_pred HHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 999999999999999999999999999999988888888899999999999999999999999999665543
No 46
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.94 E-value=8.3e-24 Score=219.68 Aligned_cols=169 Identities=27% Similarity=0.400 Sum_probs=151.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhCChHHHHHHHHHHHHHHHHHH
Q 005249 10 AATIGNFLQGWDNATIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVML 89 (706)
Q Consensus 10 il~L~~fl~gl~~~iis~~lp~I~q~fGLS~s~igLl~S~~~Ig~~Igsl~~G~LaDR~GRRrvLlig~iL~aIgsll~a 89 (706)
.++++.+...++....++..|.+.+++|.+..+.+++.++..++..++.++.|+++||+|||+++.++.++..++.+++.
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~d~~g~r~~~~~~~~~~~~~~~~~~ 82 (352)
T cd06174 3 LLFLGFFLSGLDRGLLSPALPLLAEDLGLSASQAGLIVSAFSLGYALGSLLAGYLSDRFGRRRVLLLGLLLFALGSLLLA 82 (352)
T ss_pred HHHHHHHHHHHhhhhhHhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCchhhHHHHHHHHHHHHHHH
Confidence 44566777888888888999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCcchhhHHhHHHHHHHHHHHHHHHHHHHHHHHhccchhhHHHHHHH
Q 005249 90 WSPNVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSWRLMLGVLS 169 (706)
Q Consensus 90 ~a~s~~lLli~R~L~GIg~G~~~~~~~a~IsE~fP~k~Rg~a~Gi~~ag~~LG~alg~ll~~~l~l~~~~GWR~~FlI~a 169 (706)
+.++++.++++|++.|++.+...+...+++.|++|+++|++++++.+.+..+|..+++...... .+..+||+.|++.+
T Consensus 83 ~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~~~~~~~~~~~ 160 (352)
T cd06174 83 FASSLWLLLVGRFLLGLGGGALYPAAAALIAEWFPPKERGRALGLFSAGFGLGALLGPLLGGLL--AESLGWRWLFLILA 160 (352)
T ss_pred HhccHHHHHHHHHHHHcccccccHhHHHHHHHhCCccchhhhhhHHHHHHHHHHHHHHHHHHHH--HHHhhHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999996655443 34557999999988
Q ss_pred HHHHHHHHHHH
Q 005249 170 IPALLYFAFAV 180 (706)
Q Consensus 170 il~LV~~ll~~ 180 (706)
++.++..++..
T Consensus 161 ~~~~~~~~~~~ 171 (352)
T cd06174 161 ILGLLLALLLL 171 (352)
T ss_pred HHHHHHHHHHH
Confidence 88777665543
No 47
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=99.94 E-value=2.6e-23 Score=233.25 Aligned_cols=180 Identities=13% Similarity=0.014 Sum_probs=152.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HcCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhCChHHHHHHHHHHHHH
Q 005249 6 LVAIAATIGNFLQGWDNATIAGAIVYIKK-DLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVS 84 (706)
Q Consensus 6 liliil~L~~fl~gl~~~iis~~lp~I~q-~fGLS~s~igLl~S~~~Ig~~Igsl~~G~LaDR~GRRrvLlig~iL~aIg 84 (706)
..+.+..++.++......+++++.+.+.+ ++|++.+|.+++.+++.+++.++.++.|.+.||+|.|+++.++.+++++.
T Consensus 34 r~l~~s~~~f~~~F~~w~~~~~l~~~~~~~~~~ls~~q~g~l~ai~~l~~al~rip~G~l~Dr~G~R~v~~~~~ll~~i~ 113 (462)
T PRK15034 34 RNLWISVSCLLLAFCVWMLFSAVTVNLNKIGFNFTTDQLFLLTALPSVSGALLRVPYSFMVPIFGGRRWTVFSTAILIIP 113 (462)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHH
Confidence 45666777788888888999998888877 89999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhh-----hhHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCcchhhHHhHHHHHHHHHHHHHHHHHHHHHH---Hh
Q 005249 85 GLVMLWS-----PNVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMS---LL 156 (706)
Q Consensus 85 sll~a~a-----~s~~lLli~R~L~GIg~G~~~~~~~a~IsE~fP~k~Rg~a~Gi~~ag~~LG~alg~ll~~~l~---l~ 156 (706)
+++++++ ++++.++++|++.|++ +..++.....+++|+|+++||+++|+.....++|..++.++..... +.
T Consensus 114 ~~~~~~a~~~~~~s~~~lli~r~l~Gig-g~~f~~~~~~vs~wfp~~~rG~A~Gi~~g~G~~G~~l~~~l~p~~i~~~l~ 192 (462)
T PRK15034 114 CVWLGIAVQNPNTPFGIFIVIALLCGFA-GANFASSMGNISFFFPKAKQGSALGINGGLGNLGVSVMQLVAPLVIFVPVF 192 (462)
T ss_pred HHHHHHHHcccCCCHHHHHHHHHHHHHH-HHhHHHHHHHHHHHCCHhHhHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHH
Confidence 9999987 8999999999999998 7788999999999999999999999997777777776655443321 11
Q ss_pred -------------ccchhhHHHHHHHHHHHHHHHHHHhhccCC
Q 005249 157 -------------ASPSWRLMLGVLSIPALLYFAFAVFFLPES 186 (706)
Q Consensus 157 -------------~~~GWR~~FlI~ail~LV~~ll~~lflpEs 186 (706)
...+||.++++..++.++..++.+++.++.
T Consensus 193 ~~~G~~~~~~~~g~~~~~~~~~~~~~~~~iv~~i~~~~~~~~~ 235 (462)
T PRK15034 193 AFLGVNGVPQADGSVMSLANAAWIWVPLLAIATIAAWSGMNDI 235 (462)
T ss_pred HHhccccccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCc
Confidence 133588888888888887776766665554
No 48
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.94 E-value=1.5e-23 Score=226.46 Aligned_cols=175 Identities=21% Similarity=0.218 Sum_probs=149.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChhH-----HHHHHHHHHHHHHHHHHHHHHHhhhhCChHHHHHHHHHHHH
Q 005249 9 IAATIGNFLQGWDNATIAGAIVYIKKDLNLGTTV-----EGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFV 83 (706)
Q Consensus 9 iil~L~~fl~gl~~~iis~~lp~I~q~fGLS~s~-----igLl~S~~~Ig~~Igsl~~G~LaDR~GRRrvLlig~iL~aI 83 (706)
..++++.++..+......+.+|.+.+++|++..+ .+++.+++.++.+++++++|+++||+|||++++.+.++.++
T Consensus 17 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~ 96 (408)
T PRK09874 17 TVAWLGCFLTGAAFSLVMPFLPLYVEQLGVTGHSALNMWSGLVFSITFLFSAIASPFWGGLADRKGRKIMLLRSALGMGI 96 (408)
T ss_pred HHHHHHHHHHHHHHHHhhhhHHHHHHHhCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhCcHHHHHHHHHHHHH
Confidence 3446667777888888888999999999998654 48899999999999999999999999999999999999999
Q ss_pred HHHHHHhhhhHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCcchhhHHhHHHHHHHHHHHHHHHHHHHHHHHhccchhhH
Q 005249 84 SGLVMLWSPNVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSWRL 163 (706)
Q Consensus 84 gsll~a~a~s~~lLli~R~L~GIg~G~~~~~~~a~IsE~fP~k~Rg~a~Gi~~ag~~LG~alg~ll~~~l~l~~~~GWR~ 163 (706)
+.+++.++++++.+++.|++.|++.+ ..+....++.+++|+++|++++++...+..+|.++++.+... ..+..+||+
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~--l~~~~~~~~ 173 (408)
T PRK09874 97 VMVLMGLAQNIWQFLILRALLGLLGG-FVPNANALIATQVPRNKSGWALGTLSTGGVSGALLGPLAGGL--LADSYGLRP 173 (408)
T ss_pred HHHHHHHHhhHHHHHHHHHHHHHhhh-hHHhHHHHHHHhcCHhhhhHHHHHHHHHHHHHHHHHHHHHHH--HHHHhCHHH
Confidence 99999999999999999999999865 457777889999999999999999999999999998655543 334568999
Q ss_pred HHHHHHHHHHHHHHHHHhhccCC
Q 005249 164 MLGVLSIPALLYFAFAVFFLPES 186 (706)
Q Consensus 164 ~FlI~ail~LV~~ll~~lflpEs 186 (706)
.|++.+++.++..++.+++++|.
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~ 196 (408)
T PRK09874 174 VFFITASVLFLCFLVTLFCIREN 196 (408)
T ss_pred HHHHHHHHHHHHHHHHHHHhccC
Confidence 99999888877776666677765
No 49
>PRK10504 putative transporter; Provisional
Probab=99.94 E-value=1.9e-23 Score=231.72 Aligned_cols=178 Identities=19% Similarity=0.265 Sum_probs=158.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhCChHHHHHHHHHHHHHHH
Q 005249 7 VAIAATIGNFLQGWDNATIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGL 86 (706)
Q Consensus 7 iliil~L~~fl~gl~~~iis~~lp~I~q~fGLS~s~igLl~S~~~Ig~~Igsl~~G~LaDR~GRRrvLlig~iL~aIgsl 86 (706)
.++.+++++++..++...+++.+|.+.+++|.+..+.+++.+.+.++.+++.+++|+++||+|||++++.+.++.+++.+
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~ 90 (471)
T PRK10504 11 QLWIVAFGFFMQSLDTTIVNTALPSMAQSLGESPLHMHMVIVSYVLTVAVMLPASGWLADRVGVRNIFFTAIVLFTLGSL 90 (471)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHH
Confidence 45667788888999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhhhHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCcchhhHHhHHHHHHHHHHHHHHHHHHHHHHHhccchhhHHHH
Q 005249 87 VMLWSPNVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSWRLMLG 166 (706)
Q Consensus 87 l~a~a~s~~lLli~R~L~GIg~G~~~~~~~a~IsE~fP~k~Rg~a~Gi~~ag~~LG~alg~ll~~~l~l~~~~GWR~~Fl 166 (706)
+++++++++.++++|++.|++.+...+...+++.|++|+++|++++++...+..+|.++++.+... ..+..+||+.|+
T Consensus 91 ~~~~~~~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~g~--l~~~~gw~~~f~ 168 (471)
T PRK10504 91 FCALSGTLNELLLARVLQGVGGAMMVPVGRLTVMKIVPREQYMAAMTFVTLPGQVGPLLGPALGGL--LVEYASWHWIFL 168 (471)
T ss_pred HHHHhCCHHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhhhHHHHH--HHhhccHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999998655433 345569999999
Q ss_pred HHHHHHHHHHHHHHhhccCC
Q 005249 167 VLSIPALLYFAFAVFFLPES 186 (706)
Q Consensus 167 I~ail~LV~~ll~~lflpEs 186 (706)
+...+.++..++.....|+.
T Consensus 169 ~~~~~~~l~~~~~~~~~~~~ 188 (471)
T PRK10504 169 INIPVGIIGAIATLMLMPNY 188 (471)
T ss_pred HHHHHHHHHHHHHHHhCCCc
Confidence 98877777666665555554
No 50
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.94 E-value=2.2e-23 Score=218.93 Aligned_cols=166 Identities=12% Similarity=0.070 Sum_probs=146.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhCChHHHHHHHHHHHHHHHHHHh
Q 005249 11 ATIGNFLQGWDNATIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVMLW 90 (706)
Q Consensus 11 l~L~~fl~gl~~~iis~~lp~I~q~fGLS~s~igLl~S~~~Ig~~Igsl~~G~LaDR~GRRrvLlig~iL~aIgsll~a~ 90 (706)
+.++.++..+......+.+|.+..+++.+..+.+++.+++.++.+++++++|+++||+|||+++.++.++.+++.++..+
T Consensus 4 l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~g~r~~~~~~~~~~~~~~~~~~~ 83 (365)
T TIGR00900 4 LFAAQLISLIGTAITQVALPLYVLAGTGSASVLSLAALAGMLPYVVLSPIAGALADRYDRKKVMIGADLIRAVLVAVLPF 83 (365)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhhHHHHhhchhHHHHHHHHHHHHHHHHHHH
Confidence 34566677777788888889999999999999999999999999999999999999999999999999999999888888
Q ss_pred hh-----hHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCcchhhHHhHHHHHHHHHHHHHHHHHHHHHHHhccchhhHHH
Q 005249 91 SP-----NVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSWRLML 165 (706)
Q Consensus 91 a~-----s~~lLli~R~L~GIg~G~~~~~~~a~IsE~fP~k~Rg~a~Gi~~ag~~LG~alg~ll~~~l~l~~~~GWR~~F 165 (706)
.+ +++.++++|++.|++.+...+...+++.|++|+++|++++++.+.+..+|.++++.+.... ....+||+.|
T Consensus 84 ~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l--~~~~g~~~~~ 161 (365)
T TIGR00900 84 VALLGGLNIWQVYVLAGILAIAQAFFTPAYQAMLPDLVPEEQLTQANSLSQAVRSLFYIVGPGIGGLM--YATLGIKWAI 161 (365)
T ss_pred HHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHH--HHHhhHHHHH
Confidence 77 9999999999999999999999999999999999999999999999999999996655443 3456999999
Q ss_pred HHHHHHHHHHHHH
Q 005249 166 GVLSIPALLYFAF 178 (706)
Q Consensus 166 lI~ail~LV~~ll 178 (706)
++.++..++..++
T Consensus 162 ~~~~~~~~~~~~~ 174 (365)
T TIGR00900 162 WVDAVGFAISALL 174 (365)
T ss_pred HHHHHHHHHHHHH
Confidence 8877766654433
No 51
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.94 E-value=3.1e-23 Score=220.69 Aligned_cols=173 Identities=20% Similarity=0.221 Sum_probs=141.8
Q ss_pred HHHHHHHHHHHHHHHHHHH-HHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhCChHHHH-HHHHHHHHHHHHHHh
Q 005249 13 IGNFLQGWDNATIAGAIVY-IKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLI-LSSVLYFVSGLVMLW 90 (706)
Q Consensus 13 L~~fl~gl~~~iis~~lp~-I~q~fGLS~s~igLl~S~~~Ig~~Igsl~~G~LaDR~GRRrvLl-ig~iL~aIgsll~a~ 90 (706)
+.+++.++......+.+|. +.+++|.+..+.+++.+++.++..+.+++.|.++||+||||.++ .+.++.+++.+++++
T Consensus 4 ~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~ 83 (375)
T TIGR00899 4 LVAFLTGIAGALQFPTLSLFLSEEVRARPAMIGLFYTGSAIVGIAVSQLLATRSDYQGDRKGLILFCCLLAALACLLFAW 83 (375)
T ss_pred HHHHHHHHHHHHHhhHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHHHh
Confidence 3466667777777787775 56789999999999999999999999999999999999988765 456666777788889
Q ss_pred hhhHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCcchhhHH--hHHHHHHHHHHHHHHHHHHHHHHHhccchhhHHHHHH
Q 005249 91 SPNVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRL--NTLPQFTGSGGMFLAYCMVFGMSLLASPSWRLMLGVL 168 (706)
Q Consensus 91 a~s~~lLli~R~L~GIg~G~~~~~~~a~IsE~fP~k~Rg~a--~Gi~~ag~~LG~alg~ll~~~l~l~~~~GWR~~FlI~ 168 (706)
+++++.+++.|++.|.+.+...|...+++.|+.|++.|+.+ .+....+.++|.++++.+... ..+..+||+.|++.
T Consensus 84 ~~~~~~l~~~~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ig~~~~~~--l~~~~~~~~~f~~~ 161 (375)
T TIGR00899 84 NRNYFLLLVLGVLLSSFASTANPQLFALAREHADRTGREAVMFSSVMRAQISLAWVIGPPLAFW--LALGFGFTVMFLTA 161 (375)
T ss_pred cchHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhhcchhhHHHHHHHHHHHhHHHHHhhhHHHH--HHHhcccHHHHHHH
Confidence 99999999999999988888888888899999988777654 577888888999998555433 34456999999999
Q ss_pred HHHHHHHHHHHHhhccCCc
Q 005249 169 SIPALLYFAFAVFFLPESP 187 (706)
Q Consensus 169 ail~LV~~ll~~lflpEsp 187 (706)
+++.++..++.++++||.|
T Consensus 162 ~~~~~~~~~~~~~~~~~~~ 180 (375)
T TIGR00899 162 ALAFVLCGVLVWLFLPSYP 180 (375)
T ss_pred HHHHHHHHHHHHHhCCCcc
Confidence 9888777766667788875
No 52
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.94 E-value=1.3e-23 Score=232.34 Aligned_cols=178 Identities=21% Similarity=0.309 Sum_probs=162.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhCChHHHHHHHHHHHHHHH
Q 005249 7 VAIAATIGNFLQGWDNATIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGL 86 (706)
Q Consensus 7 iliil~L~~fl~gl~~~iis~~lp~I~q~fGLS~s~igLl~S~~~Ig~~Igsl~~G~LaDR~GRRrvLlig~iL~aIgsl 86 (706)
+++.++++.++..++....++.+|.+.+++|.+..+.+++.+.+.++.+++.++.|+++||+|||++++++.++.+++.+
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~ 82 (485)
T TIGR00711 3 LTIVLMLGTFMAVLDSTIVNVAIPTIAGDLGSSLSQVQWVITSYMLANAISIPLTGWLAKRFGTRRLFLISTFAFTLGSL 82 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhhhHHHHHHHHHHHHHHHhHHHHHHHhCcHHHHHHHHHHHHHHHH
Confidence 45677888899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhhhHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCcchhhHHhHHHHHHHHHHHHHHHHHHHHHHHhccchhhHHHH
Q 005249 87 VMLWSPNVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSWRLMLG 166 (706)
Q Consensus 87 l~a~a~s~~lLli~R~L~GIg~G~~~~~~~a~IsE~fP~k~Rg~a~Gi~~ag~~LG~alg~ll~~~l~l~~~~GWR~~Fl 166 (706)
+++++++++.++++|++.|++.+...+...+++.|++|+++|+++++++..+..+|.++++.+.. ...+..+||+.|+
T Consensus 83 ~~~~~~~~~~l~~~~~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~--~l~~~~~w~~~f~ 160 (485)
T TIGR00711 83 LCGVAPNLELMIIFRVIQGFGGGPLIPLSFSTLLNIYPPEKRGRAMAIWGLTVLVAPALGPTLGG--WIIENYHWRWIFL 160 (485)
T ss_pred HHhCcCCHHHHHHHHHHHHhhhhhHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHhhhhhccHh--HhccCcCceehhh
Confidence 99999999999999999999999999999999999999999999999999999999999965543 3456679999999
Q ss_pred HHHHHHHHHHHHHHhhccCC
Q 005249 167 VLSIPALLYFAFAVFFLPES 186 (706)
Q Consensus 167 I~ail~LV~~ll~~lflpEs 186 (706)
+.++++++..++.+++.|++
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~ 180 (485)
T TIGR00711 161 INVPIGIIVVVVAFFILPRD 180 (485)
T ss_pred hhhHHHHHHHHHHHHHcCCc
Confidence 98888877777766777765
No 53
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.93 E-value=8.5e-24 Score=235.94 Aligned_cols=179 Identities=15% Similarity=0.067 Sum_probs=149.6
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhCChHHHHHHHHHHH
Q 005249 3 GAALVAIAATIGNFLQGWDNATIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYF 82 (706)
Q Consensus 3 r~~liliil~L~~fl~gl~~~iis~~lp~I~q~fGLS~s~igLl~S~~~Ig~~Igsl~~G~LaDR~GRRrvLlig~iL~a 82 (706)
+.|.++..+++...........++..+|.+.+++|++.++.+++.+.+.++..++.+++|+++||+|||++++.+.++.+
T Consensus 16 ~~w~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~~ 95 (455)
T TIGR00892 16 WGWVVLGATFVSIGFSYAFPKAVTVFFKELQQIFQATYSETAWISSIMLAVLYAGGPISSILVNRFGCRPVVIAGGLLAS 95 (455)
T ss_pred cchHHHHHHHHHHHHHHhhhcchhhhHHHHHHHhCcchhHHHHHHHHHHHHHHHhhHHHHHHHHHcCchHHHHhhHHHHH
Confidence 45767777777766666666667888999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhhhHHHHHH-HHHHHHHHHHhHHHHHHHHHHhcCCcchhhHHhHHHHHHHHHHHHHHHHHHHHHHHhccchh
Q 005249 83 VSGLVMLWSPNVYVLCI-ARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSW 161 (706)
Q Consensus 83 Igsll~a~a~s~~lLli-~R~L~GIg~G~~~~~~~a~IsE~fP~k~Rg~a~Gi~~ag~~LG~alg~ll~~~l~l~~~~GW 161 (706)
++.++++++++++.+++ .|++.|++.+...+....++.++++ ++|++++++.+.+..+|.++++.+... .....||
T Consensus 96 ~~~~~~~~~~~~~~l~~~~~~l~G~~~~~~~~~~~~~~~~~~~-~~r~~a~g~~~~~~~~g~~~~~~l~~~--l~~~~gw 172 (455)
T TIGR00892 96 LGMILASFSSNVIELYLTAGFITGLGLAFNFQPSLTMLGKYFY-RRRPLANGLAMAGSPVFLSTLAPLNQY--LFESFGW 172 (455)
T ss_pred HHHHHHHHhhhHHHHHHHHHHHHHhcchhhhhHHHHHHHHHHH-hhHHHHHHHHHhcccHHHHHHHHHHHH--HHHHhCh
Confidence 99999999999998875 4789999999877777788899996 689999999999999999988554433 3445699
Q ss_pred hHHHHHHHHHHHHHHHHHHhhcc
Q 005249 162 RLMLGVLSIPALLYFAFAVFFLP 184 (706)
Q Consensus 162 R~~FlI~ail~LV~~ll~~lflp 184 (706)
|+.|++.+++.++..++.++..+
T Consensus 173 r~~f~~~~~~~~~~~v~~~~~~~ 195 (455)
T TIGR00892 173 RGSFLILGGLLLHCCVCGALMRP 195 (455)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCC
Confidence 99999999888765554444433
No 54
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.93 E-value=9.3e-23 Score=222.80 Aligned_cols=175 Identities=13% Similarity=0.044 Sum_probs=131.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhCChHHHHHHHHHHHHHHHHH
Q 005249 9 IAATIGNFLQGWDNATIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVM 88 (706)
Q Consensus 9 iil~L~~fl~gl~~~iis~~lp~I~q~fGLS~s~igLl~S~~~Ig~~Igsl~~G~LaDR~GRRrvLlig~iL~aIgsll~ 88 (706)
....++.++.........+.++.+.+++|++..+.+++.+.+.+++.++++++|+++||+|||+++..+.++.+++.+++
T Consensus 16 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~dr~g~k~~l~~~~~~~~~~~~~~ 95 (402)
T TIGR00897 16 LWGYIGVVVFMTGDGLEQGWLSPFLKALGLSPQQSASAFTLYGIAAAISAWISGVVAEIIGPLKTMMIGLLLWCVGHAAF 95 (402)
T ss_pred hHHHHHHHHHHHhhhhHHHhHHHHHHHhCCCHHHhHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHH
Confidence 33444445555554444555666778999999999999999999999999999999999999999999999999887655
Q ss_pred H---h-hhhHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCcchhhHHhHHHHHHHHHHH-HHHHHHHHHHHHhccchhhH
Q 005249 89 L---W-SPNVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGM-FLAYCMVFGMSLLASPSWRL 163 (706)
Q Consensus 89 a---~-a~s~~lLli~R~L~GIg~G~~~~~~~a~IsE~fP~k~Rg~a~Gi~~ag~~LG~-alg~ll~~~l~l~~~~GWR~ 163 (706)
. + .++++.+++.|++.|++.+...+....++.+++|+++|++++|+.+.+.++|. ++++... .......||+.
T Consensus 96 ~~~~~~~~~~~~l~~~~~i~G~g~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~g~~~~--~~l~~~~g~~~ 173 (402)
T TIGR00897 96 IVFGLGHANYPLILLFYGIRGLGYPLFAYSFLVWVVYNTKQDNLSSAVGWFWAVYSIGIGVFGSYYS--SYAIPAFGEMN 173 (402)
T ss_pred HHHhccCccHHHHHHHHHHHHcchHHHHhHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHH--HhcccccchHH
Confidence 3 3 35788889999999999988888888889999999999999999999999997 4564433 22234457655
Q ss_pred HHHHHHHHHHHHHHHHHhhccC
Q 005249 164 MLGVLSIPALLYFAFAVFFLPE 185 (706)
Q Consensus 164 ~FlI~ail~LV~~ll~~lflpE 185 (706)
.++......++..++.+++.++
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~ 195 (402)
T TIGR00897 174 TLWSALAFVLTGGVIALFSNKD 195 (402)
T ss_pred HHHHHHHHHHHHHHHHHhccCC
Confidence 5544433333333333344444
No 55
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=99.93 E-value=2.4e-23 Score=217.96 Aligned_cols=173 Identities=28% Similarity=0.452 Sum_probs=151.1
Q ss_pred HHHHHHHHHHHHHHHHHHH-HHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhCChHHHHHHHHHHHHHHHHHHh
Q 005249 12 TIGNFLQGWDNATIAGAIV-YIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVMLW 90 (706)
Q Consensus 12 ~L~~fl~gl~~~iis~~lp-~I~q~fGLS~s~igLl~S~~~Ig~~Igsl~~G~LaDR~GRRrvLlig~iL~aIgsll~a~ 90 (706)
+++.++..++...+.+.+| .+.+++|.+..+.+++.+++.++..+++++.|+++||+|||+++.++.++.+++.++..+
T Consensus 2 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~ 81 (352)
T PF07690_consen 2 FLAFFLSGFGFSIISPALPLYLAEELGLSPSQIGLLFSAFFLGSALFSPFAGYLSDRFGRRRVLIIGLLLFALGSLLLAF 81 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHH-HHHCCSTTTSHCHHHHHHHHHHHHHHHHHHHHHHHHHS-HHHHHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCeeeEeehhhhhhhHHHHhhh
Confidence 5667778888888889999 899999999999999999999999999999999999999999999999999999777777
Q ss_pred hhhHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCcchhhHHhHHHHHHHHHHHHHHHHHHHHHHHhccchhhHHHHHHHH
Q 005249 91 SPNVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSWRLMLGVLSI 170 (706)
Q Consensus 91 a~s~~lLli~R~L~GIg~G~~~~~~~a~IsE~fP~k~Rg~a~Gi~~ag~~LG~alg~ll~~~l~l~~~~GWR~~FlI~ai 170 (706)
+++++.++++|++.|++.+...+...+++.|++|+++|++++++...+..+|.++++.+. ....+..+||+.|++.++
T Consensus 82 ~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~--~~l~~~~~~~~~~~~~~~ 159 (352)
T PF07690_consen 82 ASNFWLLLIARFLLGIGSGFFSPASNALIADWFPPEERGRAFGILSAGFSLGSILGPLLG--GFLISYFGWRWAFLISAI 159 (352)
T ss_dssp HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCTCCHHHHHHHHHHHHHHHHHHHHHHH--HHCCCHCHHCCHHHHHHH
T ss_pred hhhHHHHhhhccccccccccccccccccccccchhhhhhhccccccchhhhhhhcccchh--hhhhhccccccccccccc
Confidence 788889999999999999999999999999999999999999999999999999995444 344466799999999999
Q ss_pred HHHHHHHHHHhhccCC
Q 005249 171 PALLYFAFAVFFLPES 186 (706)
Q Consensus 171 l~LV~~ll~~lflpEs 186 (706)
+.++.+++..++++++
T Consensus 160 ~~~~~~il~~~~~~~~ 175 (352)
T PF07690_consen 160 LSLIAAILFILFLPEP 175 (352)
T ss_dssp HHHHHHHHHHCCC---
T ss_pred hhhhhhhhHhhhhhhc
Confidence 9988776555666554
No 56
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.93 E-value=2e-23 Score=221.12 Aligned_cols=171 Identities=23% Similarity=0.339 Sum_probs=134.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHcC--CChhHHHHHHHH-----HHHHHHHHHHHHHHHhhhhCChHHHHHHHHHHHHHHHHH
Q 005249 16 FLQGWDNATIAGAIVYIKKDLN--LGTTVEGLVVAM-----SLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVM 88 (706)
Q Consensus 16 fl~gl~~~iis~~lp~I~q~fG--LS~s~igLl~S~-----~~Ig~~Igsl~~G~LaDR~GRRrvLlig~iL~aIgsll~ 88 (706)
+++++++..+++..+.+.+++. .++.+.+.+.+. ..++..+++++.|+++||+|||+++.++.++.+++.+++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~ 82 (394)
T TIGR00883 3 AVEWFDFYLYGFAAVLVFHTFFPPSGDPLVALLATFATFAAGFLARPLGAIVFGHFGDRIGRKKTLVITLLMMGIGTLLI 82 (394)
T ss_pred chhHHHHHHHHHHHHHHHHHhcCCCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhhhhhhhhHHHHHHHHHHHHHHHHHH
Confidence 5678889999998888888865 445555554443 233445788999999999999999999999999999999
Q ss_pred HhhhhHH--------HHHHHHHHHHHHHHhHHHHHHHHHHhcCCcchhhHHhHHHHHHHHHHHHHHHHHHHHHHH-----
Q 005249 89 LWSPNVY--------VLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSL----- 155 (706)
Q Consensus 89 a~a~s~~--------lLli~R~L~GIg~G~~~~~~~a~IsE~fP~k~Rg~a~Gi~~ag~~LG~alg~ll~~~l~l----- 155 (706)
++++++. .++++|++.|++.+...+....++.|++|+++|+++.++.+.+..+|.++++.+......
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~G~~i~~~~~~~~~~~~~~~ 162 (394)
T TIGR00883 83 GLLPSYATIGIWAPILLLLARLIQGFSLGGEWGGAALYLAEYAPPGKRGFYGSFQQVGAPVGLLLAALTVLLLSYLLGDD 162 (394)
T ss_pred hhCCChhhhHHHHHHHHHHHHHHHHhhccccccccHHHhhhcCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHH
Confidence 9988875 478889999999999999999999999999999999999999999999998766544321
Q ss_pred -hccchhhHHHHHHHHHHHHHHHHHHhhccCCc
Q 005249 156 -LASPSWRLMLGVLSIPALLYFAFAVFFLPESP 187 (706)
Q Consensus 156 -~~~~GWR~~FlI~ail~LV~~ll~~lflpEsp 187 (706)
....+||+.|++.+++.++.. +.....+|+|
T Consensus 163 ~~~~~~w~~~~~~~~~~~~~~~-~~~~~~~~~~ 194 (394)
T TIGR00883 163 ALLEWGWRIPFLVSAVLVLIGL-YLRRNLEETP 194 (394)
T ss_pred HhhccchHHHHHHHHHHHHHHH-HHHHhcCCCh
Confidence 135689999988776655433 3334455553
No 57
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.92 E-value=6.3e-22 Score=214.25 Aligned_cols=172 Identities=19% Similarity=0.247 Sum_probs=150.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhCChHHHHHHHHHHHHHHHHHHhhh
Q 005249 13 IGNFLQGWDNATIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVMLWSP 92 (706)
Q Consensus 13 L~~fl~gl~~~iis~~lp~I~q~fGLS~s~igLl~S~~~Ig~~Igsl~~G~LaDR~GRRrvLlig~iL~aIgsll~a~a~ 92 (706)
+..+....+.....+.+|.+.+++|.+..+.++..+++.++..+++++.|+++||+|||+++.++.++.+++.+++.+++
T Consensus 10 ~~~~~~~~~~~~~~~~lp~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~i~~~~~~~~~ 89 (392)
T PRK10473 10 ALVLLYPAGIDMYLVGLPRIAADLNASEAQLHIAFSVYLAGMAAAMLFAGKIADRSGRKPVAIPGAALFIIASLLCSLAE 89 (392)
T ss_pred HHHHHHHHHHHHHhhhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHhHHHHHhCChHHHHHHHHHHHHHHHHHHHhC
Confidence 33444555555666788999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCcchhhHHhHHHHHHHHHHHHHHHHHHHHHHHhccchhhHHHHHHHHHH
Q 005249 93 NVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSWRLMLGVLSIPA 172 (706)
Q Consensus 93 s~~lLli~R~L~GIg~G~~~~~~~a~IsE~fP~k~Rg~a~Gi~~ag~~LG~alg~ll~~~l~l~~~~GWR~~FlI~ail~ 172 (706)
+++.++++|++.|++.+...+....++.|++|+++|++++++.+....+|.++++..... .....+||+.|++.++++
T Consensus 90 ~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~i~~~~~~~i~~~--l~~~~g~~~~~~~~~~~~ 167 (392)
T PRK10473 90 TSSLFLAGRFLQGIGAGCCYVVAFAILRDTLDDRRRAKVLSLLNGITCIIPVLAPVLGHL--IMLKFPWQSLFYTMAAMG 167 (392)
T ss_pred cHHHHHHHHHHHHhhhhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHhCcChHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999998888655433 334569999999998888
Q ss_pred HHHHHHHHhhccCC
Q 005249 173 LLYFAFAVFFLPES 186 (706)
Q Consensus 173 LV~~ll~~lflpEs 186 (706)
++..++.++++||+
T Consensus 168 ~i~~~~~~~~~~~~ 181 (392)
T PRK10473 168 ILVLLLSLFILKET 181 (392)
T ss_pred HHHHHHHHHHcCCC
Confidence 87777766777765
No 58
>PRK10054 putative transporter; Provisional
Probab=99.92 E-value=7.5e-22 Score=216.09 Aligned_cols=172 Identities=12% Similarity=0.136 Sum_probs=145.4
Q ss_pred HHHHHHHHHHHHHHHHHHH-HHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhCChHHHHHHHHHHHHHHHHHHh
Q 005249 12 TIGNFLQGWDNATIAGAIV-YIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVMLW 90 (706)
Q Consensus 12 ~L~~fl~gl~~~iis~~lp-~I~q~fGLS~s~igLl~S~~~Ig~~Igsl~~G~LaDR~GRRrvLlig~iL~aIgsll~a~ 90 (706)
.+..++.........+.+| ++.+++|++..+.|++.+++.+++.+++++.|+++||+|||++++++.++.+++.++.++
T Consensus 13 ~~~~~~~~~g~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~k~~~~~~~~~~~~~~~~~~~ 92 (395)
T PRK10054 13 LASSLLLTIGRGATLPFMTIYLSRQYSLSVDLIGYAMTIALTIGVVFSLGFGILADKFDKKRYMLLAITAFASGFIAIPL 92 (395)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHHHH
Confidence 3455555666666666655 566789999999999999999999999999999999999999999999999999999999
Q ss_pred hhhHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCcchhhHHhHHHHHHHHHHHHHHHHHHHHHHHhccchhhHHHHHHHH
Q 005249 91 SPNVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSWRLMLGVLSI 170 (706)
Q Consensus 91 a~s~~lLli~R~L~GIg~G~~~~~~~a~IsE~fP~k~Rg~a~Gi~~ag~~LG~alg~ll~~~l~l~~~~GWR~~FlI~ai 170 (706)
+++++.++++|++.|.+.+...+....+..|.+|+++|++++++.....++|.++++.+..... ..+|+..|++.++
T Consensus 93 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~lg~~igp~l~~~l~---~~g~~~~f~~~~~ 169 (395)
T PRK10054 93 VNNVTLVVLFFALINCAYSVFSTVLKAWFADNLSSTSKTKIFSLNYTMLNIGWTVGPPLGTLLV---MQSINLPFWLAAI 169 (395)
T ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HhccCcHHHHHHH
Confidence 9999999999999998888888888999999999999999999999999999999976655443 2589999998888
Q ss_pred HHHHHHHHHHhhccCC
Q 005249 171 PALLYFAFAVFFLPES 186 (706)
Q Consensus 171 l~LV~~ll~~lflpEs 186 (706)
+.++..++..+++|+.
T Consensus 170 ~~~i~~i~~~~~~~~~ 185 (395)
T PRK10054 170 CSAFPLVFIQIWVQRS 185 (395)
T ss_pred HHHHHHHHHHHHHhcc
Confidence 7777655555556554
No 59
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=99.92 E-value=7.3e-22 Score=211.37 Aligned_cols=164 Identities=20% Similarity=0.323 Sum_probs=146.6
Q ss_pred HHHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhCChHHHHHHHHHHHHHHHHHHhhhhHHHHHHH
Q 005249 21 DNATIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVMLWSPNVYVLCIA 100 (706)
Q Consensus 21 ~~~iis~~lp~I~q~fGLS~s~igLl~S~~~Ig~~Igsl~~G~LaDR~GRRrvLlig~iL~aIgsll~a~a~s~~lLli~ 100 (706)
....+.|.+|.+.+++|++..+.+++.+++.++.+++.+++|+++||+|||+++..+.++.+++.+++.++++++.++++
T Consensus 6 ~~~~~~p~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 85 (377)
T PRK11102 6 AIDMYLPALPVIAADFGVSAGSVQMTLSAYILGFAIGQLFYGPMADSFGRKPVILGGTLVFALAAVACALAQTIDQLIYM 85 (377)
T ss_pred HHHHHhccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhchHHhhcCChHHHHHHHHHHHHHHHHHHHHccHHHHHHH
Confidence 34556688899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhHHHHHHHHHHhcCCcchhhHHhHHHHHHHHHHHHHHHHHHHHHHHhccchhhHHHHHHHHHHHHHHHHHH
Q 005249 101 RLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSWRLMLGVLSIPALLYFAFAV 180 (706)
Q Consensus 101 R~L~GIg~G~~~~~~~a~IsE~fP~k~Rg~a~Gi~~ag~~LG~alg~ll~~~l~l~~~~GWR~~FlI~ail~LV~~ll~~ 180 (706)
|++.|++.+...+...+++.|++|+++|++++++.+.+..+|..+++...... ....+||+.|++.+++.++..++..
T Consensus 86 ~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l--~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (377)
T PRK11102 86 RFLHGLAAAAASVVINALMRDMFPKEEFSRMMSFVTLVMTIAPLLAPIIGGWL--LVWFSWHAIFWVLALAAILAAALVF 163 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHcChHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999986554433 3456999999998888877766666
Q ss_pred hhccCC
Q 005249 181 FFLPES 186 (706)
Q Consensus 181 lflpEs 186 (706)
+++||+
T Consensus 164 ~~~~~~ 169 (377)
T PRK11102 164 FFIPET 169 (377)
T ss_pred HhCCcc
Confidence 667765
No 60
>PRK11043 putative transporter; Provisional
Probab=99.92 E-value=2e-21 Score=210.97 Aligned_cols=176 Identities=21% Similarity=0.216 Sum_probs=149.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhCChHHHHHHHHHHHHHHHH
Q 005249 8 AIAATIGNFLQGWDNATIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLV 87 (706)
Q Consensus 8 liil~L~~fl~gl~~~iis~~lp~I~q~fGLS~s~igLl~S~~~Ig~~Igsl~~G~LaDR~GRRrvLlig~iL~aIgsll 87 (706)
++.+.+..++..+....+.|.+|.+.+++|++..+.+++.+++.+++.++++++|+++||+|||+++.++.++.+++.++
T Consensus 8 ~~~~~~~~~~~~~~~~~~~p~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~ 87 (401)
T PRK11043 8 LVYLAGLSMLGFLATDMYLPAFKAIQADLQTSASAVSASLSLFLAGFALGQLLWGPLSDRYGRKPVLLAGLSLFALGSLG 87 (401)
T ss_pred HHHHHHHHHHHHHHHHHHHhhHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHhhhhHHhhcCCcHHHHHHHHHHHHHHHH
Confidence 33344445556667778888889999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhhhHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCcchhhHHhHHHHHHHHHHHHHHHHHHHHHHHhccchhhHHHHH
Q 005249 88 MLWSPNVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSWRLMLGV 167 (706)
Q Consensus 88 ~a~a~s~~lLli~R~L~GIg~G~~~~~~~a~IsE~fP~k~Rg~a~Gi~~ag~~LG~alg~ll~~~l~l~~~~GWR~~FlI 167 (706)
+.++++++.+++.|++.|++.+...+...+++.|++|+++++++.+.......+|.++++..... ..+..+||+.|++
T Consensus 88 ~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~--l~~~~g~~~~~~~ 165 (401)
T PRK11043 88 MLWVESAAQLLVLRFVQAVGVCSAAVIWQALVIDRYPAQKANRVFATIMPLVALSPALAPLLGAW--LLNHFGWQAIFAT 165 (401)
T ss_pred HHHhcCHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHhcCChHHHHHH
Confidence 99999999999999999999988888888999999999999999999888888888888555443 3455699999998
Q ss_pred HHHHHHHHHHHHHhhccCC
Q 005249 168 LSIPALLYFAFAVFFLPES 186 (706)
Q Consensus 168 ~ail~LV~~ll~~lflpEs 186 (706)
.+++.++..++. ++++++
T Consensus 166 ~~~~~~~~~~~~-~~~~~~ 183 (401)
T PRK11043 166 LFAITLLLILPT-LRLKPS 183 (401)
T ss_pred HHHHHHHHHHHH-HHcCCC
Confidence 888877765554 344443
No 61
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.91 E-value=3e-21 Score=211.64 Aligned_cols=171 Identities=18% Similarity=0.249 Sum_probs=145.1
Q ss_pred HHHHHHHHHHHHHHHHHHH-HHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhCChHHHHHHHHHHHHHHHHHHh
Q 005249 12 TIGNFLQGWDNATIAGAIV-YIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVMLW 90 (706)
Q Consensus 12 ~L~~fl~gl~~~iis~~lp-~I~q~fGLS~s~igLl~S~~~Ig~~Igsl~~G~LaDR~GRRrvLlig~iL~aIgsll~a~ 90 (706)
....++.........++++ ++.+++|++..+.|++.+++.++..+.++++|+++||+|||++++++.++.+++.+++.+
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~gl~~~~~~l~~~~~~~~~G~l~dr~g~k~~l~~~~~~~~~~~~~~~~ 95 (400)
T PRK11646 16 LIDNMLVVLGFFVVFPLISIRFVDQLGWAAVMVGIALGLRQFIQQGLGIFGGAIADRFGAKPMIVTGMLMRAAGFATMAI 95 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHhhhhHHHHHhCchHHHHHHHHHHHHHHHHHHH
Confidence 3444444555455555554 567899999999999999999999999999999999999999999999999999999999
Q ss_pred hhhHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCcchhhHHhHHHHHHHHHHHHHHHHHHHHHHHhccchhhHHHHHHHH
Q 005249 91 SPNVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSWRLMLGVLSI 170 (706)
Q Consensus 91 a~s~~lLli~R~L~GIg~G~~~~~~~a~IsE~fP~k~Rg~a~Gi~~ag~~LG~alg~ll~~~l~l~~~~GWR~~FlI~ai 170 (706)
+++++.++++|++.|++.+...+...+++.+++|+++|++++++......+|..+|+....... ..+||+.|++.++
T Consensus 96 ~~~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~g~l~---~~g~~~~f~~~~~ 172 (400)
T PRK11646 96 AHEPWLLWLSCILSGLGGTLFDPPRTALVIKLIRPHQRGRFFSLLMMQDSAGAVIGALLGSWLL---QYDFRLVCATGAV 172 (400)
T ss_pred hccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HhhHHHHHHHHHH
Confidence 9999999999999999999888999999999999999999999999999999999966654443 4599999998888
Q ss_pred HHHHHHHHHHhhccC
Q 005249 171 PALLYFAFAVFFLPE 185 (706)
Q Consensus 171 l~LV~~ll~~lflpE 185 (706)
+.++.+++..++.||
T Consensus 173 ~~~~~~i~~~~~~~~ 187 (400)
T PRK11646 173 LFVLAAAFNAWLLPA 187 (400)
T ss_pred HHHHHHHHHHHhCCc
Confidence 777665554555554
No 62
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.91 E-value=5.3e-21 Score=208.41 Aligned_cols=176 Identities=18% Similarity=0.185 Sum_probs=131.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHH-HHHHcCCChhHHHHHHHHHHH-HHHHHHHHHHHHhhhhCChHHH-HHHHHHHHHHH
Q 005249 9 IAATIGNFLQGWDNATIAGAIVY-IKKDLNLGTTVEGLVVAMSLI-GATAITTCSGPISDWLGRRPML-ILSSVLYFVSG 85 (706)
Q Consensus 9 iil~L~~fl~gl~~~iis~~lp~-I~q~fGLS~s~igLl~S~~~I-g~~Igsl~~G~LaDR~GRRrvL-lig~iL~aIgs 85 (706)
....++.++.++....+.+.+|. +.+++|++.+++|++.+...+ ++.++.+++++ .||+||||.+ ..+.++.+++.
T Consensus 18 ~~~~~~~~~~~~~~~~~~p~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~-~dr~g~r~~~~~~~~~~~~~~~ 96 (393)
T PRK15011 18 TAFLIVAFLTGIAGALQTPTLSIFLTDEVHARPAMVGFFFTGSAVIGILVSQFLAGR-SDKRGDRKSLIVFCCLLGVLAC 96 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHH-HhcccchhHHHHHHHHHHHHHH
Confidence 34455566677777777776665 678899999999999776544 66666666666 9999999875 45666666777
Q ss_pred HHHHhhhhHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCcchh--hHHhHHHHHHHHHHHHHHHHHHHHHHHhccchhhH
Q 005249 86 LVMLWSPNVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIR--GRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSWRL 163 (706)
Q Consensus 86 ll~a~a~s~~lLli~R~L~GIg~G~~~~~~~a~IsE~fP~k~R--g~a~Gi~~ag~~LG~alg~ll~~~l~l~~~~GWR~ 163 (706)
++.+++++++.+++.+.+.|...+...+....++.++.+++.| +...++.+.+.++|.++++..... ..+..|||.
T Consensus 97 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~g~~i~~~--l~~~~gw~~ 174 (393)
T PRK15011 97 TLFAWNRNYFVLLFVGVFLSSFGSTANPQMFALAREHADKTGREAVMFSSFLRAQVSLAWVIGPPLAYA--LAMGFSFTV 174 (393)
T ss_pred HHHHHhhHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHHHHhhHHHHH--HHHhcChHH
Confidence 7888899999887776666655566778888888888876655 345678888999999999555443 344569999
Q ss_pred HHHHHHHHHHHHHHHHHhhccCCc
Q 005249 164 MLGVLSIPALLYFAFAVFFLPESP 187 (706)
Q Consensus 164 ~FlI~ail~LV~~ll~~lflpEsp 187 (706)
.|++.++++++.+++.++++||.|
T Consensus 175 ~f~~~~~~~~~~~~~~~~~~~~~~ 198 (393)
T PRK15011 175 MYLSAAVAFIVCGVMVWLFLPSMR 198 (393)
T ss_pred HHHHHHHHHHHHHHHHHhhcCccC
Confidence 999998888877766667777763
No 63
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=99.91 E-value=3.4e-21 Score=212.82 Aligned_cols=172 Identities=15% Similarity=0.090 Sum_probs=151.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhCChHHHHHHHHHHHHHHH
Q 005249 7 VAIAATIGNFLQGWDNATIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGL 86 (706)
Q Consensus 7 iliil~L~~fl~gl~~~iis~~lp~I~q~fGLS~s~igLl~S~~~Ig~~Igsl~~G~LaDR~GRRrvLlig~iL~aIgsl 86 (706)
.++.+++.+++.++.....++.+|.+++++|++..+.+++.+.+.+++.+++++.|++.||+|||++++++.++++++.+
T Consensus 4 ~~~~~~~~f~~~G~~~~~~~~l~~~~~~~~~~s~~~~g~l~s~~~~g~~i~~~~~g~l~~r~G~r~~~~~g~~l~~~g~~ 83 (410)
T TIGR00885 4 PFALITSLFALWGFANDITNPMVPQFQQAFTLTAFQAALVQSAFYGGYFIMAIPAAIFMKKLSYKAGILLGLFLYALGAF 83 (410)
T ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHH
Confidence 35567788888899999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred HHHh---hhhHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCcchhhHHhHHHHHHHHHHHHHHHHHHHHHHHh-------
Q 005249 87 VMLW---SPNVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLL------- 156 (706)
Q Consensus 87 l~a~---a~s~~lLli~R~L~GIg~G~~~~~~~a~IsE~fP~k~Rg~a~Gi~~ag~~LG~alg~ll~~~l~l~------- 156 (706)
++.. .++++.+++.|++.|++.|...+....++.+..|+++|++.+++.+.+.++|..+++.+.......
T Consensus 84 l~~~~~~~~~~~~~l~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~~g~~i~~~l~~~~~~~~~~ 163 (410)
T TIGR00885 84 LFWPAAEIMNYTLFLVGLFILTAGLGFLETAANPYILVMGPESTATRRLNLAQSFNPFGSIIGMVVAQQLILSNLPHQSQ 163 (410)
T ss_pred HHHHHHhhccHHHHHHHHHHHHhhHHHHHhhhhHHHHHHCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccchh
Confidence 8654 358999999999999999999999999999999999999999999999999999997766544321
Q ss_pred -----------------ccchhhHHHHHHHHHHHHHHHH
Q 005249 157 -----------------ASPSWRLMLGVLSIPALLYFAF 178 (706)
Q Consensus 157 -----------------~~~GWR~~FlI~ail~LV~~ll 178 (706)
+..+||++|++.+++.++.+++
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~w~~~fl~~a~~~~~~~~~ 202 (410)
T TIGR00885 164 DVLDKLSPEELSAIKHSDLASVQTPYMIIGAVVLAVALL 202 (410)
T ss_pred hhhhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1236999999888877765433
No 64
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=99.91 E-value=7.8e-21 Score=209.45 Aligned_cols=177 Identities=19% Similarity=0.321 Sum_probs=155.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhCChHHHHHHHHHHHHHHHH
Q 005249 8 AIAATIGNFLQGWDNATIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLV 87 (706)
Q Consensus 8 liil~L~~fl~gl~~~iis~~lp~I~q~fGLS~s~igLl~S~~~Ig~~Igsl~~G~LaDR~GRRrvLlig~iL~aIgsll 87 (706)
...+.+..++..+....+.+.+|.+.++++.+..+.++..+++.++++++++++|.++||+|||++++.+.++++++.++
T Consensus 18 ~~~~~~~~~~~~~~~~~~~p~l~~i~~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~ 97 (413)
T PRK15403 18 PMALILYDFAAYLTTDLIQPGIINVVRDFNADVSLAPASVSLYLAGGMALQWLLGPLSDRIGRRPVLITGALIFTLACAA 97 (413)
T ss_pred HHHHHHHHHHHHHHHHhhccCHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhHHHHHcCchHHHHHHHHHHHHHHHH
Confidence 34445555666778888888999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhhhHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCcchhhHHhHHHHHHHHHHHHHHHHHHHHHHHhccchhhHHHHH
Q 005249 88 MLWSPNVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSWRLMLGV 167 (706)
Q Consensus 88 ~a~a~s~~lLli~R~L~GIg~G~~~~~~~a~IsE~fP~k~Rg~a~Gi~~ag~~LG~alg~ll~~~l~l~~~~GWR~~FlI 167 (706)
++++++++.++++|+++|++.+...+....++.|++|+++|++++++...+..+|.++++.+.... ....+||+.|++
T Consensus 98 ~~~a~~~~~l~~~r~l~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lg~~l--~~~~gw~~~f~~ 175 (413)
T PRK15403 98 TLFTTSMTQFLIARFIQGTSICFIATVGYVTVQEAFGQTKGIKLMAIITSIVLVAPIIGPLSGAAL--MHFVHWKVLFAI 175 (413)
T ss_pred HHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHhcCHHHHHHH
Confidence 999999999999999999999877777788999999999999999999999999999996555433 345699999999
Q ss_pred HHHHHHHHHHHHHhhccCC
Q 005249 168 LSIPALLYFAFAVFFLPES 186 (706)
Q Consensus 168 ~ail~LV~~ll~~lflpEs 186 (706)
.+++.++.+++.++++||+
T Consensus 176 ~~~~~~i~~~~~~~~lp~~ 194 (413)
T PRK15403 176 IAVMGLIAFVGLLLAMPET 194 (413)
T ss_pred HHHHHHHHHHHHHHhCCCC
Confidence 9988887766656667876
No 65
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=99.91 E-value=1.2e-20 Score=204.33 Aligned_cols=183 Identities=19% Similarity=0.199 Sum_probs=156.9
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhCChHHHHHHHHHHH
Q 005249 3 GAALVAIAATIGNFLQGWDNATIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYF 82 (706)
Q Consensus 3 r~~liliil~L~~fl~gl~~~iis~~lp~I~q~fGLS~s~igLl~S~~~Ig~~Igsl~~G~LaDR~GRRrvLlig~iL~a 82 (706)
+.+..+.++.+..++..+......+.+|.+.+++|++..+.+++.+++.++++++++++|+++||+|||+++.++.++.+
T Consensus 5 ~~~~~l~~~~~~~~~~~~~~~~~~p~~~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~grr~~~~~~~~~~~ 84 (394)
T PRK11652 5 RNVNLLFMLVLLVAVGQMAQTIYVPAIADMARDLNVREGAVQAVMAAYLLTYGLSQLFYGPLSDRVGRRPVILVGMSIFI 84 (394)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHH
Confidence 44555555566666667777788888999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhhhHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCcchhhHHhHHHHHHHHHHHHHHHHHHHHHHHhccchhh
Q 005249 83 VSGLVMLWSPNVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSWR 162 (706)
Q Consensus 83 Igsll~a~a~s~~lLli~R~L~GIg~G~~~~~~~a~IsE~fP~k~Rg~a~Gi~~ag~~LG~alg~ll~~~l~l~~~~GWR 162 (706)
++.+++.++++++.+++.|++.|++.+...+....+..|.+++++|+++.++.+.+..+|.++++..... ..+..+||
T Consensus 85 ~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~--l~~~~g~~ 162 (394)
T PRK11652 85 LGTLVALFAHSLTVLIAASAIQGLGTGVGGVMARTLPRDLYEGTQLRHANSLLNMGILVSPLLAPLIGGL--LTTLFGWR 162 (394)
T ss_pred HHHHHHHHHccHHHHHHHHHHHHhhhhHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHhccChH
Confidence 9999999999999999999999999998888888899999999999999999999999999888655443 34456999
Q ss_pred HHHHHHHHHHHHHHHHHHhhccCCc
Q 005249 163 LMLGVLSIPALLYFAFAVFFLPESP 187 (706)
Q Consensus 163 ~~FlI~ail~LV~~ll~~lflpEsp 187 (706)
+.|++.+++.++..++..++.||+|
T Consensus 163 ~~f~~~~~~~~~~~~~~~~~~~~~~ 187 (394)
T PRK11652 163 ACYLFLLLLGAGVTFSMARWMPETR 187 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCccC
Confidence 9999988877766655566677763
No 66
>PRK10133 L-fucose transporter; Provisional
Probab=99.90 E-value=9.7e-21 Score=210.86 Aligned_cols=149 Identities=15% Similarity=0.083 Sum_probs=136.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhCChHHHHHHHHHHHH
Q 005249 4 AALVAIAATIGNFLQGWDNATIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFV 83 (706)
Q Consensus 4 ~~liliil~L~~fl~gl~~~iis~~lp~I~q~fGLS~s~igLl~S~~~Ig~~Igsl~~G~LaDR~GRRrvLlig~iL~aI 83 (706)
.++.++.+++.++..++.+...++..|.+++++|++..+.+++.+.+.+++++++++.|.+.||+|||+++.++.+++++
T Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~~~~~~s~~~~gl~~~~~~~g~~i~~~~~g~l~dr~G~r~~l~~g~~~~~~ 103 (438)
T PRK10133 24 YIIPFALLCSLFFLWAVANNLNDILLPQFQQAFTLTNFQAGLIQSAFYFGYFIIPIPAGILMKKLSYKAGIITGLFLYAL 103 (438)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHH
Confidence 55666777888888899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHH---HhhhhHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCcchhhHHhHHHHHHHHHHHHHHHHHHHH
Q 005249 84 SGLVM---LWSPNVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFG 152 (706)
Q Consensus 84 gsll~---a~a~s~~lLli~R~L~GIg~G~~~~~~~a~IsE~fP~k~Rg~a~Gi~~ag~~LG~alg~ll~~~ 152 (706)
+.+++ .++++++.++++|+++|++.|...+....++.++.|+++|...+++.+.+..+|..+++++...
T Consensus 104 ~~~l~~~~~~a~~~~~ll~~r~l~G~g~g~~~~~~~~~v~~~~~~~~~~~~~s~~~~~~~~G~~~g~~~g~~ 175 (438)
T PRK10133 104 GAALFWPAAEIMNYTLFLVGLFIIAAGLGCLETAANPFVTVLGPESSGHFRLNLAQTFNSFGAIIAVVFGQS 175 (438)
T ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99886 4678999999999999999999999999999998888877778999999999999999766543
No 67
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.90 E-value=7.4e-22 Score=222.13 Aligned_cols=153 Identities=20% Similarity=0.355 Sum_probs=138.5
Q ss_pred HHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhCChHHHHHHHHHHHHHHHHHHhhh--hHHHHHHHHHHHHHHHHhH
Q 005249 34 KDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVMLWSP--NVYVLCIARLLDGFGVGLA 111 (706)
Q Consensus 34 q~fGLS~s~igLl~S~~~Ig~~Igsl~~G~LaDR~GRRrvLlig~iL~aIgsll~a~a~--s~~lLli~R~L~GIg~G~~ 111 (706)
.+++++..+.+++.+.+++|++++++++|+++||+|.|+++..+.++.++++++...+. +++.++++|+++|++.|..
T Consensus 66 ~~~~ws~~~k~~i~ss~~~G~i~~~iP~g~l~~k~G~r~v~~~~~~~sa~~t~l~P~aa~~~~~~~~~~R~lqGl~~g~~ 145 (466)
T KOG2532|consen 66 GEYDWSSTEKGLIFSSFFWGYILGQIPGGYLADKFGARRVFFISGLISALLTLLTPLAASIGFYLLLVLRFLQGLGQGVL 145 (466)
T ss_pred ceecCCHHHHHHHHHHHHHHHHHHHcCcHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHhHHHHhHH
Confidence 46889999999999999999999999999999999999999999999999999998764 5567889999999999999
Q ss_pred HHHHHHHHHhcCCcchhhHHhHHHHHHHHHHHHHHHHHHHHHHHhcc-chhhHHHHHHHHHHHHHHHHHHhhccCCch
Q 005249 112 VTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLAS-PSWRLMLGVLSIPALLYFAFAVFFLPESPR 188 (706)
Q Consensus 112 ~~~~~a~IsE~fP~k~Rg~a~Gi~~ag~~LG~alg~ll~~~l~l~~~-~GWR~~FlI~ail~LV~~ll~~lflpEsp~ 188 (706)
+|+...+.+.|.|+++|++..++..++..+|.+++..+ ...+.+. .||+.+|++.++++++..++++++..|+|.
T Consensus 146 ~pa~~~i~~~W~P~~Ers~~~ail~~g~q~g~v~~mp~--sg~lc~s~~GW~sifY~~g~~g~i~~~~w~~~~~d~P~ 221 (466)
T KOG2532|consen 146 FPAIGSILAKWAPPNERSTFIAILTAGSQLGTIITMPV--SGLLCESSLGWPSIFYVFGIVGLIWFILWFLFYSDSPS 221 (466)
T ss_pred HhhhhceeeeECCHHHHHHHHHHHHHHHHHHHHHHHHh--HHHHhccCCCCchHHHHHHHHHHHHHHHHHHHhcCCcc
Confidence 99999999999999999999999999999999998433 3333344 899999999999999999888888888874
No 68
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=99.90 E-value=2.7e-21 Score=205.50 Aligned_cols=177 Identities=24% Similarity=0.181 Sum_probs=146.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH-HHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhCChHHHHHHHHHHHHHHHHH
Q 005249 10 AATIGNFLQGWDNATIAGAIVY-IKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVM 88 (706)
Q Consensus 10 il~L~~fl~gl~~~iis~~lp~-I~q~fGLS~s~igLl~S~~~Ig~~Igsl~~G~LaDR~GRRrvLlig~iL~aIgsll~ 88 (706)
+.+++.++.......++++.|. +.+++|++..+.+++.+++.++++++++++|+++||+|||++++++.++.+++.+++
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~i~~~~~ 84 (366)
T TIGR00886 5 FSWFGFFLSFSVWFAFSPLAVQMIKDDLGLSTAQLGNLVAVPVLAGAVLRIILGFLVDKFGPRYTTTLSLLLLAIPCLWA 84 (366)
T ss_pred HHHHHHHHHHHHHHHhHHhhhHHHHHHhCCCHHHhhHhhHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHH
Confidence 4566666777777888899995 999999999999999999999999999999999999999999999999999999999
Q ss_pred Hhhh-hHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCcchhhHHhHHHHHHHHHHHHHHHHHHHHHHHh--------ccc
Q 005249 89 LWSP-NVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLL--------ASP 159 (706)
Q Consensus 89 a~a~-s~~lLli~R~L~GIg~G~~~~~~~a~IsE~fP~k~Rg~a~Gi~~ag~~LG~alg~ll~~~l~l~--------~~~ 159 (706)
++++ +++.+++.|++.|++.+. .+....++++++|+++|++++++...+.++|..+++.+....... ...
T Consensus 85 ~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~~~~ 163 (366)
T TIGR00886 85 GLAVQSYSVLLLLRLFIGIAGGS-FASCMPWISFFFPKKIQGTALGLAAGWGNMGGGVAQFVMPPIIGSLIFGAGLPAHL 163 (366)
T ss_pred HHHhhhHHHHHHHHHHHHHhchh-hHhHHHHHHHhcCHhhhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhcccccccc
Confidence 9999 999999999999998654 566788999999999999999999988888887776554333211 134
Q ss_pred hhhHHH-HHHHHHHHHHHHHHHhhccCCc
Q 005249 160 SWRLML-GVLSIPALLYFAFAVFFLPESP 187 (706)
Q Consensus 160 GWR~~F-lI~ail~LV~~ll~~lflpEsp 187 (706)
+||+.| ++.+++.++..++.+.+.++.|
T Consensus 164 ~w~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (366)
T TIGR00886 164 AWGWAFVIVPAGILLLPALLIFFVGADTP 192 (366)
T ss_pred cccchhHHHHHHHHHHHHHHHHHhcccCC
Confidence 899999 4446655555555556666654
No 69
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=99.90 E-value=1.8e-21 Score=212.29 Aligned_cols=180 Identities=20% Similarity=0.224 Sum_probs=156.6
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhCChHHHHHHHHHHHH
Q 005249 4 AALVAIAATIGNFLQGWDNATIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFV 83 (706)
Q Consensus 4 ~~liliil~L~~fl~gl~~~iis~~lp~I~q~fGLS~s~igLl~S~~~Ig~~Igsl~~G~LaDR~GRRrvLlig~iL~aI 83 (706)
....+.+..+...+......+++++.+.+.+++|+|+.|.+++.++..+...+..++.|.+.||||.|++..++.++..+
T Consensus 12 ~~~~L~~S~~af~v~F~VW~l~s~l~~~i~~~~~LS~~q~~ll~aiPil~GallRl~~g~l~drfGgR~~~~~s~~l~~I 91 (417)
T COG2223 12 ARRNLWLSTLAFDVGFMVWTLFSPLGVFIKSDFGLSEGQKGLLVAIPILVGALLRLPYGFLTDRFGGRKWTILSMLLLLI 91 (417)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhhhccccCCCHHHHHHHHHHHHHHhHHHHHHHHhhhcccCchHHHHHHHHHHHH
Confidence 34456666677777778888889999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhh---hHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCcchhhHHhHHHHHHHHHHHHHHHHHHHHHHHhccch
Q 005249 84 SGLVMLWSP---NVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPS 160 (706)
Q Consensus 84 gsll~a~a~---s~~lLli~R~L~GIg~G~~~~~~~a~IsE~fP~k~Rg~a~Gi~~ag~~LG~alg~ll~~~l~l~~~~G 160 (706)
.++..+++. +++++++++++.|++.+ .++....+++.|||++++|.++|++. ..++|..+..+....... ..+
T Consensus 92 P~~~~~~a~~~~~~~~ll~~gll~G~~Ga-sFav~m~~~s~~fP~~~qG~AlGI~g-~GN~G~av~q~~~P~v~~--~~g 167 (417)
T COG2223 92 PCLGLAFAVTYPSTWQLLVIGLLLGLAGA-SFAVGMPNASFFFPKEKQGLALGIAG-AGNLGVAVAQLVAPLVAV--AFG 167 (417)
T ss_pred HHHHHHHHccCCchHHHHHHHHHHhcccc-eehcccccccccCChhhhhHHHHHhc-cccccHHHHHHHHHHHHH--HHh
Confidence 999999875 45599999999999754 55888899999999999999999999 889999888776655533 235
Q ss_pred ---hhHHHHHHHHHHHHHHHHHHhhccCCc
Q 005249 161 ---WRLMLGVLSIPALLYFAFAVFFLPESP 187 (706)
Q Consensus 161 ---WR~~FlI~ail~LV~~ll~~lflpEsp 187 (706)
|+.+..+..+..++.+++.+++..|.|
T Consensus 168 ~~~w~~~~~i~~~~l~v~~v~~~~~~~d~p 197 (417)
T COG2223 168 FLAWRNVAGIYVVALAIAAVLAWLGMNDVP 197 (417)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhCCCh
Confidence 999999999998888888888888875
No 70
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=99.90 E-value=7.9e-23 Score=224.68 Aligned_cols=186 Identities=17% Similarity=0.257 Sum_probs=172.8
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhCChHHHHHHHHH
Q 005249 1 MNGAALVAIAATIGNFLQGWDNATIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVL 80 (706)
Q Consensus 1 ~~r~~liliil~L~~fl~gl~~~iis~~lp~I~q~fGLS~s~igLl~S~~~Ig~~Igsl~~G~LaDR~GRRrvLlig~iL 80 (706)
|++.++.++++++..++++.+++.+....+.++++|+++++..|++.+.+.+++++.++++|+++|||.||+++.+|.++
T Consensus 28 ~~~~~~~l~il~~vnlmny~Dr~~iagv~~~v~~~fni~~s~~Gll~~vf~v~~~i~sPl~gyLadryNR~~v~~vG~~i 107 (493)
T KOG1330|consen 28 MKSPTLTLVILCLVNLMNYADRYTIAGVLKEVQTYFNISDSELGLLQTVFIVVFMIASPLFGYLADRYNRKRVIAVGIFI 107 (493)
T ss_pred cccchHHHHHHHHHHHHHHhhhhhhhhhhHHHHHhcCCCchhccchhHHHHHHHHHHHHHHHHHHhhcCcceEEeeHHHH
Confidence 35567788999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhhhHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCcchhhHHhHHHHHHHHHHHHHHHHHHHHHHHhccch
Q 005249 81 YFVSGLVMLWSPNVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPS 160 (706)
Q Consensus 81 ~aIgsll~a~a~s~~lLli~R~L~GIg~G~~~~~~~a~IsE~fP~k~Rg~a~Gi~~ag~~LG~alg~ll~~~l~l~~~~G 160 (706)
+.++.++++++.+||+++++|.+.|+|.+...++++++++|.||.++|++++++++.+..+|..+|++......... ..
T Consensus 108 W~~Av~~~~fs~~Fwq~~l~R~~vGiGeAs~~~ia~s~IaD~f~~~~Rs~~~~ify~~ipvGsglG~vvgs~va~~~-~~ 186 (493)
T KOG1330|consen 108 WTLAVFASGFSNHFWQVLLCRGFVGIGEASYSPIAPSLIADSFPDDKRSRVLGIFYFAIPVGSGLGYVVGSVVASLT-FW 186 (493)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccchhhhcccchhHhhhcCcchhhhHHHHHhhhhcccccceeEEeeeeeccCc-cc
Confidence 99999999999999999999999999999999999999999999999999999999999999999966654443222 23
Q ss_pred hhHHHHHHHHHHHHHHHHHHhhccCCc
Q 005249 161 WRLMLGVLSIPALLYFAFAVFFLPESP 187 (706)
Q Consensus 161 WR~~FlI~ail~LV~~ll~~lflpEsp 187 (706)
|||.|.+.++++++++++.+++.+|++
T Consensus 187 Wr~af~~~avl~vi~~~L~~~f~~eP~ 213 (493)
T KOG1330|consen 187 WRWAFRGSAVLGVIVGLLVFLFVREPE 213 (493)
T ss_pred eEEEEEeehHHHHHHHHHHHhhccCcc
Confidence 999999999999999999999999974
No 71
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.89 E-value=1.8e-21 Score=220.07 Aligned_cols=185 Identities=19% Similarity=0.159 Sum_probs=165.5
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhCChHHHHHHHHHHH
Q 005249 4 AALVAIAATIGNFLQGWDNATIAGAIV-YIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYF 82 (706)
Q Consensus 4 ~~liliil~L~~fl~gl~~~iis~~lp-~I~q~fGLS~s~igLl~S~~~Ig~~Igsl~~G~LaDR~GRRrvLlig~iL~a 82 (706)
.+.++..+++.++....+...++.... -+.+|.++...+.+.+.++++++|+++.+++|.+.||++..+.+....++++
T Consensus 43 dl~i~~~~~~~y~~~~~d~~si~~a~l~g~~edl~~~~~~l~~~~t~F~v~Yii~~~p~~~L~~r~~ls~~l~~~~~~w~ 122 (495)
T KOG2533|consen 43 DLFILPFLCYLYFHAYLDKSSIVNASLSGLKEDLKLVGNQLGVLDTVFYVGYIIGQFPSGLLGDRFPLSKGLSVSGILWG 122 (495)
T ss_pred HHHHHHHHHHHHHHHhcchhcchhHHHcCCccccchhhhhhhhHHHHHHHHHHHHHhhHHHHHHhCChHHHHHHHHHHHH
Confidence 345667778888888888877665322 2558899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhhhHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCcchhhHHhHHHHHHHHHHHHHHHHHHHHHHH----hcc
Q 005249 83 VSGLVMLWSPNVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSL----LAS 158 (706)
Q Consensus 83 Igsll~a~a~s~~lLli~R~L~GIg~G~~~~~~~a~IsE~fP~k~Rg~a~Gi~~ag~~LG~alg~ll~~~l~l----~~~ 158 (706)
+..++....+|++.+++.|++.|+.++..+|+...+++.||.+++|++.++++.++.++|.++|.++...... ...
T Consensus 123 ~~~~~~~~~~s~~~~ialr~llGl~es~~wP~~~~~lg~wy~~~e~g~r~~~~~a~~~~g~i~ggliA~g~~~~~~~~~~ 202 (495)
T KOG2533|consen 123 LFGFLTAAVHSFPGLIALRFLLGLFESGGWPGVVAILGNWYGKSERGLRMGIWYASASLGNIFGGLIAYGVFKLNGSGGL 202 (495)
T ss_pred HHHHHHHHHhhhHHHHHHHHHHHHHhcccchHHHHHHHhhcChhhhhhhHHHHHHhcchhhHHHHHHHHHhhhhcCCCCc
Confidence 9998888899999999999999999999999999999999999999999999999999999999888877543 234
Q ss_pred chhhHHHHHHHHHHHHHHHHHHhhccCCch
Q 005249 159 PSWRLMLGVLSIPALLYFAFAVFFLPESPR 188 (706)
Q Consensus 159 ~GWR~~FlI~ail~LV~~ll~~lflpEsp~ 188 (706)
.||||.|++.|+++++..++.++++|+.|.
T Consensus 203 ~gW~~~FiI~G~i~~~~gi~~f~~lp~~P~ 232 (495)
T KOG2533|consen 203 AGWRWLFIIEGVITLVLGIVVFFFLPDNPS 232 (495)
T ss_pred CCceeehhHHHHHHHHHHheEEEEecCChh
Confidence 599999999999999999999999999975
No 72
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.89 E-value=8.4e-20 Score=206.30 Aligned_cols=173 Identities=16% Similarity=0.167 Sum_probs=140.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhh-----CChHH-HHHHHHHHHH
Q 005249 10 AATIGNFLQGWDNATIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWL-----GRRPM-LILSSVLYFV 83 (706)
Q Consensus 10 il~L~~fl~gl~~~iis~~lp~I~q~fGLS~s~igLl~S~~~Ig~~Igsl~~G~LaDR~-----GRRrv-Llig~iL~aI 83 (706)
.+++.++..++.....++.+|.+.++.|.+..+++.+ +.....+ ++.+++|.++||+ |||+. ++++.++.++
T Consensus 16 ~~~~l~~~~gl~~~~~~~~l~~~l~~~g~~~~~ig~~-~~~~~~~-~~~~l~gpl~Dr~~~~~~Grrr~~ll~~~i~~~~ 93 (491)
T PRK11010 16 ILLILGFASGLPLALTSGTLQAWMTVENIDLKTIGFF-SLVGQAY-VFKFLWSPLMDRYTPPFLGRRRGWLLATQLLLLV 93 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHH-HHHHHHH-HHHHHHHHHHHcccccCCCCchHHHHHHHHHHHH
Confidence 4455566777778888889999999999999999987 4444444 6889999999999 99985 6677787878
Q ss_pred HHHHHHhh---hhHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCcchhhHHhHHHHHHHHHHHHHHHHHHHHHHHhc-cc
Q 005249 84 SGLVMLWS---PNVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLA-SP 159 (706)
Q Consensus 84 gsll~a~a---~s~~lLli~R~L~GIg~G~~~~~~~a~IsE~fP~k~Rg~a~Gi~~ag~~LG~alg~ll~~~l~l~~-~~ 159 (706)
+.+++++. ++++.+.+.+++.|++.+...+...+++.|++|+++|+++.++...+..+|.++++.+.... .. ..
T Consensus 94 ~~~~~a~~~~~~~l~~l~~~~~l~~~~~a~~~i~~~a~~~~~~~~~~rg~~~~i~~~g~~lG~llg~~l~~~l--~~~~~ 171 (491)
T PRK11010 94 AIAAMGFLEPGTQLRWLAALAVVIAFCSASQDIVFDAWKTDVLPAEERGAGAAISVLGYRLAMLVSGGLALWL--ADRYL 171 (491)
T ss_pred HHHHHHHcCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhHHHHHHHHHHHHHHHHHHHHHHHHH--Hhccc
Confidence 87777764 47888999999999999999999999999999999999999999999999999995554333 33 35
Q ss_pred hhhHHHHHHHHHHHHHHHHHHhhccCCc
Q 005249 160 SWRLMLGVLSIPALLYFAFAVFFLPESP 187 (706)
Q Consensus 160 GWR~~FlI~ail~LV~~ll~~lflpEsp 187 (706)
|||..|++.+++.++..+. .+++||+|
T Consensus 172 GWr~~f~i~a~l~ll~~l~-~~~~~e~~ 198 (491)
T PRK11010 172 GWQGMYWLMAALLIPCIIA-TLLAPEPT 198 (491)
T ss_pred CHHHHHHHHHHHHHHHHHH-HHhcCCCc
Confidence 9999999998877765444 34567763
No 73
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=99.89 E-value=1.7e-20 Score=200.34 Aligned_cols=150 Identities=20% Similarity=0.316 Sum_probs=128.9
Q ss_pred HHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhCChHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHH
Q 005249 23 ATIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVMLWSPNVYVLCIARL 102 (706)
Q Consensus 23 ~iis~~lp~I~q~fGLS~s~igLl~S~~~Ig~~Igsl~~G~LaDR~GRRrvLlig~iL~aIgsll~a~a~s~~lLli~R~ 102 (706)
..+++.+|.+.+++|++.++.+++.+++.+++.+++++.|+++||+|||+++.++.++..++.+++ ..++++.+++.|+
T Consensus 17 ~~~~~~lp~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~ 95 (355)
T TIGR00896 17 TSVGPLLPQIRSALGMSFSVAGLLTALPVLCFAVLAPLAPWLARRFGEERSVAAGLLLIAAGILIR-SAPGTALLFAGTA 95 (355)
T ss_pred ccCcccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCchHHHHHHHHHHHHHHHHH-HhccHHHHHHHHH
Confidence 456788999999999999999999999999999999999999999999999999999988888877 7789999999999
Q ss_pred HHHHHHHhHHHHHHHHHHhcCCcchhhHHhHHHHHHHHHHHHHHHHHHHHHHHhccchhhHHHHHHHHHHHH
Q 005249 103 LDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSWRLMLGVLSIPALL 174 (706)
Q Consensus 103 L~GIg~G~~~~~~~a~IsE~fP~k~Rg~a~Gi~~ag~~LG~alg~ll~~~l~l~~~~GWR~~FlI~ail~LV 174 (706)
+.|++.+...+....++.+++| ++|++++++.+.+..+|..+++.+..........+||+.|.+.+++.++
T Consensus 96 ~~g~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~i~~~~~~~l~~~~~~~w~~~f~~~~~~~~~ 166 (355)
T TIGR00896 96 LIGVGIAIINVLLPSLIKRDFP-QRVGLMTGLYSMALMGGAALAAAATVPLAQHSGGHWQQALAWWALPALL 166 (355)
T ss_pred HHHHHHHHHhccchHHHHHhCc-chhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHH
Confidence 9999999988888889999997 5799999999999999999986665443322223599998877665443
No 74
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=99.89 E-value=1.2e-19 Score=198.62 Aligned_cols=170 Identities=16% Similarity=0.186 Sum_probs=139.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhCChHHHHHHHHHHHHHHHHHHh
Q 005249 11 ATIGNFLQGWDNATIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVMLW 90 (706)
Q Consensus 11 l~L~~fl~gl~~~iis~~lp~I~q~fGLS~s~igLl~S~~~Ig~~Igsl~~G~LaDR~GRRrvLlig~iL~aIgsll~a~ 90 (706)
++++.++..++...+....+.+.++++.+..+.+++.+++.+++.+..+++|+++||+|||++++++.++.+++.+++++
T Consensus 8 l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~l~~~l~~~~~G~laDr~grr~vl~~~~~~~~~~~~~~~~ 87 (393)
T PRK11195 8 IMAAQFFSALADNALLFAAIALLKELHYPDWSQPLLQMFFVLAYIVLAPFVGAFADSFPKGRVMFIANGIKLLGCLLMLF 87 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHhhhhHhhhccCCchhhHHHHHHHHHHHHHHHH
Confidence 45666666665555566667778999999999999999999999999999999999999999999999999999888877
Q ss_pred hhhHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCcchhhHHhHHHHHHHHHHHHHHHHHHHHHHHhccchhhHHHHHHHH
Q 005249 91 SPNVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSWRLMLGVLSI 170 (706)
Q Consensus 91 a~s~~lLli~R~L~GIg~G~~~~~~~a~IsE~fP~k~Rg~a~Gi~~ag~~LG~alg~ll~~~l~l~~~~GWR~~FlI~ai 170 (706)
+.+. ++.|+++|++.+...|...+++.|++|+++|++++++.+....+|.++|+.+...... ..|+..+.+.+.
T Consensus 88 ~~~~---~~~r~l~G~~~a~~~pa~~a~i~~~~~~~~~~~a~~~~~~~~~~~~~~Gp~lgG~l~~---~~~~~~~~i~~~ 161 (393)
T PRK11195 88 GIHP---LLAYGLVGIGAAAYSPAKYGILTELLPGEKLVKANGWMEGSTIAAILLGTVLGGALAD---PHAEAALAVCAL 161 (393)
T ss_pred HHHH---HHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHH
Confidence 7664 6789999999999999999999999999999999999999999999999766654432 247777766655
Q ss_pred HHHHHHHHHHhhccCCc
Q 005249 171 PALLYFAFAVFFLPESP 187 (706)
Q Consensus 171 l~LV~~ll~~lflpEsp 187 (706)
..++. ++..+++||+|
T Consensus 162 ~~~~~-~~~~~~l~~~~ 177 (393)
T PRK11195 162 IYLLA-ALFNLFIPRLG 177 (393)
T ss_pred HHHHH-HHHHhcCCCCc
Confidence 54433 33446677763
No 75
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.88 E-value=2.2e-19 Score=194.93 Aligned_cols=155 Identities=16% Similarity=0.108 Sum_probs=125.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhCChHHH----HHHHHHHHHHHH
Q 005249 11 ATIGNFLQGWDNATIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPML----ILSSVLYFVSGL 86 (706)
Q Consensus 11 l~L~~fl~gl~~~iis~~lp~I~q~fGLS~s~igLl~S~~~Ig~~Igsl~~G~LaDR~GRRrvL----lig~iL~aIgsl 86 (706)
+.+.++..+.......|++|.+.+++|++..++|++.+++.++..++++++|.++||+||+... .++..+..+ .
T Consensus 9 l~~~~~~~~~~~~~~~p~l~~~l~~~g~s~~~ig~~~s~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~l~~~--~ 86 (382)
T TIGR00902 9 LALGFFGYFCAYGIFLPFFPAWLKGIGLGEEMIGLLIGAALIARFAGGLFFAPLIKDANHIIIALRLLALASAIFAA--A 86 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHH--H
Confidence 5667777888888899999999999999999999999999999999999999999999985433 222222222 2
Q ss_pred HHHhhhhHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCcchhhHHhHHHHHHHHHHHHHHHHHHHHHHHhccchhhHHHH
Q 005249 87 VMLWSPNVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSWRLMLG 166 (706)
Q Consensus 87 l~a~a~s~~lLli~R~L~GIg~G~~~~~~~a~IsE~fP~k~Rg~a~Gi~~ag~~LG~alg~ll~~~l~l~~~~GWR~~Fl 166 (706)
.+..+++++.+++.|++.|.+.+...+...++..++ .++|++++|....+.++|.++++.+... ..+..|||..|.
T Consensus 87 ~~~~~~~~~~l~~~~~l~~~~~~~~~p~~~al~~~~--~~~~~~~~g~~~~~~slG~~~g~~l~g~--l~~~~g~~~~f~ 162 (382)
T TIGR00902 87 FSAGAHNAWLLFIAIGLFALFFSAGMPIGDALANTW--QKQFGLDYGKVRLIGSAAFIIGSALFGG--LIGMFDEQNILA 162 (382)
T ss_pred HHHhhhhHHHHHHHHHHHHHHHccchhHHHHHHHHH--HHHcCCCccHHHHHHHHHHHHHHHHHHH--HHHHcChhHHHH
Confidence 444678999999999999999888888888887665 4678999999999999999999655443 345679999998
Q ss_pred HHHHH
Q 005249 167 VLSIP 171 (706)
Q Consensus 167 I~ail 171 (706)
+.++.
T Consensus 163 ~~~~~ 167 (382)
T TIGR00902 163 ILTAG 167 (382)
T ss_pred HHHHH
Confidence 77655
No 76
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.87 E-value=7.3e-20 Score=200.73 Aligned_cols=171 Identities=16% Similarity=0.083 Sum_probs=109.1
Q ss_pred HHHHHHHHHHHHHHHHHHHH-HHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhCChHHHHHHHHHHHHHHHHHH-
Q 005249 12 TIGNFLQGWDNATIAGAIVY-IKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVML- 89 (706)
Q Consensus 12 ~L~~fl~gl~~~iis~~lp~-I~q~fGLS~s~igLl~S~~~Ig~~Igsl~~G~LaDR~GRRrvLlig~iL~aIgsll~a- 89 (706)
.+..++.......+.+++|. +.+++|++..+.|++.+++.+++.++++++|+++||+|||++++++..+.+++.....
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~i~~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~~~~ 95 (420)
T PRK09528 16 SLFFFFFFFIWSSWFSFFPIWLHDINGLSGTDTGIIFSANSLFALLFQPLYGLISDKLGLKKHLLWIISGLLVLFGPFFI 95 (420)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHH
Confidence 34455555555555666655 5556999999999999999999999999999999999999999887666555433221
Q ss_pred --hhhhHH-HHHHHHHHHHHHHHhHHHHHHHHHHhcCC--cchhhHHhHHHHHHHHHHHHHHHHHHHHHHHhccchhhHH
Q 005249 90 --WSPNVY-VLCIARLLDGFGVGLAVTLVPLYISETAP--SEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSWRLM 164 (706)
Q Consensus 90 --~a~s~~-lLli~R~L~GIg~G~~~~~~~a~IsE~fP--~k~Rg~a~Gi~~ag~~LG~alg~ll~~~l~l~~~~GWR~~ 164 (706)
.++.+. ......++.++..+.........+.++.+ .+++++.+|......++|.++++.+..... ..+|+..
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~---~~~~~~~ 172 (420)
T PRK09528 96 YVFAPLLQYNILLGAIVGGIYLGFGFLAGAGAIEAYIERVSRRSGFEYGRARMWGSLGWALCAFIAGILF---NINPQIN 172 (420)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhhccchhhhhhHHHHHHhhccccchhhHHhhhHHHHHHHHHHHHHH---hcCchHh
Confidence 111111 01112222333333332222222233322 245677888888889999999876654432 2489999
Q ss_pred HHHHHHHHHHHHHHHHhhccC
Q 005249 165 LGVLSIPALLYFAFAVFFLPE 185 (706)
Q Consensus 165 FlI~ail~LV~~ll~~lflpE 185 (706)
|++.++++++.+++.++..++
T Consensus 173 f~~~~~~~~~~~~~~~~~~~~ 193 (420)
T PRK09528 173 FWLGSGSALILLVLLFFAKPD 193 (420)
T ss_pred HHHHHHHHHHHHHHHhccccc
Confidence 998888777765554444444
No 77
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.87 E-value=3.4e-19 Score=197.13 Aligned_cols=167 Identities=16% Similarity=0.027 Sum_probs=116.9
Q ss_pred HHHHHHHHHHHHHHHHH-HHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhCC-hHHHHHHHHHHHHHHHHH
Q 005249 11 ATIGNFLQGWDNATIAG-AIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGR-RPMLILSSVLYFVSGLVM 88 (706)
Q Consensus 11 l~L~~fl~gl~~~iis~-~lp~I~q~fGLS~s~igLl~S~~~Ig~~Igsl~~G~LaDR~GR-RrvLlig~iL~aIgsll~ 88 (706)
+++.+++.+.....+.+ ..+++.+++|++..++|++.+++.++.+++++++|.++||+|+ |+++.++.++.+++..+.
T Consensus 7 ~~~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~iGl~~a~~~~~~~i~~~~~g~l~dr~g~~r~~~~~~~~~~~~~~~~~ 86 (418)
T TIGR00889 7 LKFMSFLQWFIWGSWLVTLGSYMSKTLHFSGAEIGWVYSSTGIAAILMPILVGIIADKWLSAQKVYAVCHFAGALLLFFA 86 (418)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHH
Confidence 45566667777777644 4556777899999999999999999999999999999999965 778888888888888888
Q ss_pred HhhhhHHHHHHHHHHHHHHHHhHHHHHHHHHH--------hcCCcchhhHHhHHHHHHHHHHHHHHHHHHHHHHHhccch
Q 005249 89 LWSPNVYVLCIARLLDGFGVGLAVTLVPLYIS--------ETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPS 160 (706)
Q Consensus 89 a~a~s~~lLli~R~L~GIg~G~~~~~~~a~Is--------E~fP~k~Rg~a~Gi~~ag~~LG~alg~ll~~~l~l~~~~G 160 (706)
.+.++++.+++.|++.|++.+...+...+... |......|.+..|. +|.+++++..... .....
T Consensus 87 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~g~~~~~~~~~~r~~G~------lG~~ig~~l~g~l--~~~~~ 158 (418)
T TIGR00889 87 AQVTTPAGMFPVLLANSLAYMPTIALTNSISYANLPQAGLDVVTDFPPIRVMGT------IGFIAAMWAVSLL--DIELS 158 (418)
T ss_pred HHhcCHHHHHHHHHHHHHHHccHHHHHHHHHHHHHhhcCCCchhcCCCeeeehh------HHHHHHHHHHHHh--cccch
Confidence 88899999999999999987766665554432 22222334455552 4555554433322 22224
Q ss_pred hhHHHHHHHHHHHHHHHHHHhhccCCc
Q 005249 161 WRLMLGVLSIPALLYFAFAVFFLPESP 187 (706)
Q Consensus 161 WR~~FlI~ail~LV~~ll~~lflpEsp 187 (706)
|+ .|++.+++.++.+++ .+++||+|
T Consensus 159 ~~-~f~~~~~~~~~~~~~-~~~~~e~~ 183 (418)
T TIGR00889 159 NI-QLYITAGSSALLGVF-ALTLPDIP 183 (418)
T ss_pred hH-HHHHHHHHHHHHHHH-HhcCCCCC
Confidence 54 455556555554433 45677764
No 78
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.87 E-value=1.5e-19 Score=221.24 Aligned_cols=165 Identities=12% Similarity=0.050 Sum_probs=125.8
Q ss_pred HHHHHHHHHHHHHcCCCh--hHHHHHHHHHHHHHHHHHHHHHHHhhhhCChHHHHHHHHHHHHHHHHHH---hhhhHHHH
Q 005249 23 ATIAGAIVYIKKDLNLGT--TVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVML---WSPNVYVL 97 (706)
Q Consensus 23 ~iis~~lp~I~q~fGLS~--s~igLl~S~~~Ig~~Igsl~~G~LaDR~GRRrvLlig~iL~aIgsll~a---~a~s~~lL 97 (706)
.....+.+.+..+++.+. ...+++.+++.++++++++++|+++||+|||++++++.++.+++.+++. .+++++.+
T Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~G~l~Dr~grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~l 106 (1146)
T PRK08633 27 GHKILIQNTLIKAYDGSEQVILTAIVNALFLLPFLLLSSPAGFLADKFSKNRVIRIVKLFEVGLTLLIVLAYYLGWFWLA 106 (1146)
T ss_pred HHHHHHHHHHHHHcCcccHHHHHHHHHHHHHHHHHHHhhhHhhhcccccHHHHHHHHHHHHHHHHHHHHHHHHHccHHHH
Confidence 333445566777777764 4578999999999999999999999999999999988876665555443 45789999
Q ss_pred HHHHHHHHHHHHhHHHHHHHHHHhcCCcchhhHHhHHHHHHHHHHHHHHHHHHHHHHHhc-------cchhhHHHHHHHH
Q 005249 98 CIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLA-------SPSWRLMLGVLSI 170 (706)
Q Consensus 98 li~R~L~GIg~G~~~~~~~a~IsE~fP~k~Rg~a~Gi~~ag~~LG~alg~ll~~~l~l~~-------~~GWR~~FlI~ai 170 (706)
+++|++.|++.+...++..+++.|++|+++|++++|+.+++..+|.++|+++...+.... ..+|++.+.+.++
T Consensus 107 ~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~ig~~lg~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 186 (1146)
T PRK08633 107 FAVTFLLGAQSAIYSPAKYGIIPELVGKENLSRANGLLEAFTIVAILAGTALFSFLFESVNGNTPSEILGRIAPAGLVLL 186 (1146)
T ss_pred HHHHHHHHHHHHhhchHHHhhhHHhcCcccchhhhhHHHHHHHHHHHHHHHHHHHHHHhhccccccccccchHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999977665543220 1234444444444
Q ss_pred HHHHHHHHHHhhccCCc
Q 005249 171 PALLYFAFAVFFLPESP 187 (706)
Q Consensus 171 l~LV~~ll~~lflpEsp 187 (706)
..++..++..+++|++|
T Consensus 187 ~~~~~~~~~~~~~~~~~ 203 (1146)
T PRK08633 187 AVAVLGLIFAYRLPKVP 203 (1146)
T ss_pred HHHHHHHHHHhcCcCCC
Confidence 43333444445567664
No 79
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.87 E-value=2.1e-18 Score=188.40 Aligned_cols=172 Identities=16% Similarity=0.137 Sum_probs=141.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhh-----CChH-HHHHHHHHHHHH
Q 005249 11 ATIGNFLQGWDNATIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWL-----GRRP-MLILSSVLYFVS 84 (706)
Q Consensus 11 l~L~~fl~gl~~~iis~~lp~I~q~fGLS~s~igLl~S~~~Ig~~Igsl~~G~LaDR~-----GRRr-vLlig~iL~aIg 84 (706)
....++..++........+|.+.++.|++.+++|++..+... .+..+++|.++||+ |||| +++++.++.+++
T Consensus 4 ~~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~ig~~~~~~~~--~~~~~l~g~~~Dr~~~~~~g~rr~~l~~~~~~~~l~ 81 (402)
T PRK11902 4 MLLLGFASGLPLALTSGTLQAWMTVEGLDIQTIGFFSLVGQA--YIFKFLWAPLMDRYTPPLLGRRRGWLLLTQVGLAAS 81 (402)
T ss_pred HHHHHHHHhhhHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHH--HHHHHHHHHHHHcccccCCCcchhHHHHHHHHHHHH
Confidence 355677788888889999999999999999999999777665 68899999999999 8875 788888888888
Q ss_pred HHHHHhh---hhHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCcchhhHHhHHHHHHHHHHHHHHHHHHHHHHHhc-cch
Q 005249 85 GLVMLWS---PNVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLA-SPS 160 (706)
Q Consensus 85 sll~a~a---~s~~lLli~R~L~GIg~G~~~~~~~a~IsE~fP~k~Rg~a~Gi~~ag~~LG~alg~ll~~~l~l~~-~~G 160 (706)
..+.++. .+++.+++..++.++..+...++..+++.|++|+++|+++.++...+..+|.++++.+.... .. ..|
T Consensus 82 ~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~al~~~~~~~~~r~~~~~~~~~g~~~g~i~g~~l~~~l--~~~~~g 159 (402)
T PRK11902 82 IAAMAFCPPHAALWPLAGLAVLVAFLSASQDIVFDAYSTDVLHPEERGAGAAVKVLGYRLAMLVSGGLALWL--ADRVLG 159 (402)
T ss_pred HHHHHhcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhhHHHHHHHHHHHHHHHHHhHHHHHH--HhcccC
Confidence 8877776 35777888888888888889899999999999999999999999999999999985554333 33 249
Q ss_pred hhHHHHHHHHHHHHHHHHHHhhccCCc
Q 005249 161 WRLMLGVLSIPALLYFAFAVFFLPESP 187 (706)
Q Consensus 161 WR~~FlI~ail~LV~~ll~~lflpEsp 187 (706)
||..|++.+++.++..+ ..+++||++
T Consensus 160 w~~~f~i~a~~~l~~~l-~~~~~~e~~ 185 (402)
T PRK11902 160 WGNTYLLMAGLMLAGAL-TTLWAPEPE 185 (402)
T ss_pred HHHHHHHHHHHHHHHHH-HHHhcCCCc
Confidence 99999998887766444 345667653
No 80
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.86 E-value=1.9e-18 Score=187.54 Aligned_cols=155 Identities=13% Similarity=0.017 Sum_probs=121.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhCCh----HHHHHHHHHHHHHHHHHH
Q 005249 14 GNFLQGWDNATIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRR----PMLILSSVLYFVSGLVML 89 (706)
Q Consensus 14 ~~fl~gl~~~iis~~lp~I~q~fGLS~s~igLl~S~~~Ig~~Igsl~~G~LaDR~GRR----rvLlig~iL~aIgsll~a 89 (706)
.++......+.+.|.+|.+.+++|.+..++|++.+++.++..++++++|.+.||+||| +.+.++..+. ......
T Consensus 12 ~~~~~~~~~g~~~p~l~~~l~~~g~s~~~iG~~~~~~~l~~~l~~~~~g~l~dr~g~~~~~~~~~~~~~~~~--~~~~~~ 89 (382)
T PRK11128 12 SYFGYFFAYGVFLPFWSVWLKGQGYTPETIGLLLGAGLVARFLGSLLIAPRVKDPSQLIPALRLLALLTLLF--AVAFWF 89 (382)
T ss_pred HHHHHHHHHHHHhhhHHHHHHhcCCCHHHHHHHHHHHHHHHHhhhHHHHHHHhhhcchHHHHHHHHHHHHHH--HHHHHH
Confidence 3566667778888999999999999999999999999999999999999999999994 3333222222 223334
Q ss_pred hhhhHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCcchhhHHhHHHHHHHHHHHHHHHHHHHHHHHhccchhhHHHHHHH
Q 005249 90 WSPNVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSWRLMLGVLS 169 (706)
Q Consensus 90 ~a~s~~lLli~R~L~GIg~G~~~~~~~a~IsE~fP~k~Rg~a~Gi~~ag~~LG~alg~ll~~~l~l~~~~GWR~~FlI~a 169 (706)
.+++++.+++.|++.|++.+...+...+++.++ .++|+++.+....+..+|.++++.+... ..+..|||..|++.+
T Consensus 90 ~~~~~~~l~i~~~l~g~~~~~~~~~~~a~~~~~--~~~~~~a~~~~~~~~~lg~~igp~lgg~--l~~~~g~~~~f~~~~ 165 (382)
T PRK11128 90 GAHSFWLLFVAIGLFNLFFSPLVPLTDALANTW--QKQIGLDYGKVRLWGSIAFVIGSALTGK--LVSWFGEQAILWILT 165 (382)
T ss_pred hcccHHHHHHHHHHHHHHHcccccHHHHHHHHH--HhhccCCcchHHHHHHHHHHHHHHHHHH--HHHHcChhHHHHHHH
Confidence 468899999999999999988888887777776 3568888999999999999999555443 445669999998777
Q ss_pred HHHHH
Q 005249 170 IPALL 174 (706)
Q Consensus 170 il~LV 174 (706)
+..++
T Consensus 166 ~~~~~ 170 (382)
T PRK11128 166 AGVAS 170 (382)
T ss_pred HHHHH
Confidence 65444
No 81
>PTZ00207 hypothetical protein; Provisional
Probab=99.86 E-value=1.7e-18 Score=199.61 Aligned_cols=197 Identities=14% Similarity=0.094 Sum_probs=154.0
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhCChHHHHHHHHHHH
Q 005249 3 GAALVAIAATIGNFLQGWDNATIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYF 82 (706)
Q Consensus 3 r~~liliil~L~~fl~gl~~~iis~~lp~I~q~fGLS~s~igLl~S~~~Ig~~Igsl~~G~LaDR~GRRrvLlig~iL~a 82 (706)
++|++++...+...+.+.. ..++.+.+.+++++|++..+.+++.++. ..+.++++++|+++||+|+|+++.++.++++
T Consensus 25 ~Rw~~lva~~~~~~~~g~~-y~fsv~s~~L~~~lgls~~~l~~i~svg-~~~g~~~lp~G~L~Dr~G~R~vllig~ll~~ 102 (591)
T PTZ00207 25 RRFALLVLGAFCSICTSFM-YAFNLISGAMQARYNLTQRDLSTITTVG-IAVGYFLLPYSFIYDYLGPRPIFVLSMTVFC 102 (591)
T ss_pred chHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHhCcCHHHHHHHHHHH-HHHHHHHHHHHHHHHHhCcHHHHHHHHHHHH
Confidence 4566666555555555443 4556778899999999999999988773 4556778889999999999999999999999
Q ss_pred HHHHHHHhh------hhHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCcchhhHHhHHHHHHHHHHHHHHHHHHHHHHHh
Q 005249 83 VSGLVMLWS------PNVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLL 156 (706)
Q Consensus 83 Igsll~a~a------~s~~lLli~R~L~GIg~G~~~~~~~a~IsE~fP~k~Rg~a~Gi~~ag~~LG~alg~ll~~~l~l~ 156 (706)
++.++++++ ++++.+++.|++.|++.+...+.....+.+||| ++||+++|+...+.++|.++...+......
T Consensus 103 iG~ll~ala~~~~i~~s~~~l~l~r~l~G~G~~~~~~~~~~~i~~~Fp-~~RG~a~Gi~~~~~gLGsaI~~~l~~~l~~- 180 (591)
T PTZ00207 103 LGTLLFALTFQEVIEGSVVRLSVYNGLMTLGCMLFDLGAVVTVLSVFP-SNRGAVVAIMKTFTGLGSAILGSIQLAFFS- 180 (591)
T ss_pred HHHHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCh-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHH-
Confidence 999999987 689999999999999999999999999999997 679999999999999999875433333322
Q ss_pred ccchhhHHHHHHHHHHHHHHHHHHhhccCCc--hhhhcccchHHHHHHHHH
Q 005249 157 ASPSWRLMLGVLSIPALLYFAFAVFFLPESP--RWLVSKGKMLEAKQVLQR 205 (706)
Q Consensus 157 ~~~GWR~~FlI~ail~LV~~ll~~lflpEsp--~~l~~k~~~~~~~~~~~~ 205 (706)
.+|+..|++.+++.++..++.++++++.| +|...+++..+.++..++
T Consensus 181 --~~~~~~fl~l~vl~~vv~ll~~~~vr~p~~~~~~~~~~~~~~~~~~~~~ 229 (591)
T PTZ00207 181 --DNTSAYFFFLMSFALVVGILAIVFMRLPPFHLTGYQEKHLDEEEKAQRL 229 (591)
T ss_pred --HhHHHHHHHHHHHHHHHHHHHHhheeCCcchhhcccccCCCHHHHHHHh
Confidence 37888999999988888887777776554 444344333444444333
No 82
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.86 E-value=7.1e-19 Score=191.20 Aligned_cols=172 Identities=17% Similarity=0.075 Sum_probs=124.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHH-HHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhCChHHHHHHHHHHHHHHHHH
Q 005249 10 AATIGNFLQGWDNATIAGAIVYI-KKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVM 88 (706)
Q Consensus 10 il~L~~fl~gl~~~iis~~lp~I-~q~fGLS~s~igLl~S~~~Ig~~Igsl~~G~LaDR~GRRrvLlig~iL~aIgsll~ 88 (706)
.+...+++.+.....+.+.+|.+ .+++|++..+.+++.+++.+++.+++++.|+++||+|||+.++.+.+..+++....
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~l~~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~ 85 (396)
T TIGR00882 6 MFGLFFFLYFFIMSAYFPFFPIWLHDVNGLSKTDTGIVFSCISLFSILFQPLFGLISDKLGLKKHLLWIISGLLVLFAPF 85 (396)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHH
Confidence 34455666666667777777654 55799999999999999999999999999999999999999988766665544332
Q ss_pred H---hhh-----hHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCcchhhHHhHHHHHHHHHHHHHHHHHHHHHHHhccch
Q 005249 89 L---WSP-----NVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPS 160 (706)
Q Consensus 89 a---~a~-----s~~lLli~R~L~GIg~G~~~~~~~a~IsE~fP~k~Rg~a~Gi~~ag~~LG~alg~ll~~~l~l~~~~G 160 (706)
. +.+ .+..+++.+++.|++.+...+....+..+..+ +++...|....+.++|.++++.+.... ...+
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~--~~~~~~g~~~~~~~~g~~~g~~~~g~l---~~~~ 160 (396)
T TIGR00882 86 FIYVFGPLLQSNILVGAIVGGLYLGFVFSAGAGAIEAYIEKVSR--NSNFEYGKARMFGCVGWALCASIAGIL---FSID 160 (396)
T ss_pred HHHHhhhHHHHHHHHHHHHHHHHHHHHhccchhhHHHHHHHhhh--hcccccchhhhhcccHHHHHHHHHhhh---hccC
Confidence 1 121 23344566888888888877777777766533 345567777788889998886654433 2359
Q ss_pred hhHHHHHHHHHHHHHHHHHHhhccCC
Q 005249 161 WRLMLGVLSIPALLYFAFAVFFLPES 186 (706)
Q Consensus 161 WR~~FlI~ail~LV~~ll~~lflpEs 186 (706)
||..|++.+++.++.+++.+...+++
T Consensus 161 ~~~~f~~~~~~~~~~~~~~~~~~~~~ 186 (396)
T TIGR00882 161 PQIVFWLGSGFALILMLLLMFAKPKA 186 (396)
T ss_pred chHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 99999998888887665554444443
No 83
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.86 E-value=5.2e-19 Score=193.39 Aligned_cols=166 Identities=16% Similarity=0.205 Sum_probs=128.9
Q ss_pred HHHHHHH-HHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhhh----hCChH-HHHHHHHHHHHHHHHHHhhhh-
Q 005249 21 DNATIAG-AIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDW----LGRRP-MLILSSVLYFVSGLVMLWSPN- 93 (706)
Q Consensus 21 ~~~iis~-~lp~I~q~fGLS~s~igLl~S~~~Ig~~Igsl~~G~LaDR----~GRRr-vLlig~iL~aIgsll~a~a~s- 93 (706)
....+.. ..+++.+++|++..+.|++.++..+..++..++.|+++|| +|||| .++++.++.+++.+++.+.++
T Consensus 14 ~~~~~~~~l~~~~~~~~g~s~~~~g~i~~~~~i~~~i~~p~~G~lsDr~~~r~Grrr~~i~~~~~~~~i~~~~~~~~~~~ 93 (437)
T TIGR00792 14 IFAIVSTYLLFFYTDVLGLSAAFVGTLFLVARILDAITDPIMGNIVDRTRTRWGKFRPWLLIGAIPFSIVLVLLFTTPDF 93 (437)
T ss_pred HHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHhccchheEeeecCCCCCCCcchhHHHhHHHHHHHHHHHHhCCCC
Confidence 3333333 4566778899999999999999999999999999999998 67754 566788888888887776553
Q ss_pred -----HHHHHHHHHHHHHHHHhHHHHHHHHHHhcC-CcchhhHHhHHHHHHHHHHHHHHHHHHHHHHH-----hccchhh
Q 005249 94 -----VYVLCIARLLDGFGVGLAVTLVPLYISETA-PSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSL-----LASPSWR 162 (706)
Q Consensus 94 -----~~lLli~R~L~GIg~G~~~~~~~a~IsE~f-P~k~Rg~a~Gi~~ag~~LG~alg~ll~~~l~l-----~~~~GWR 162 (706)
...+++.+++.+++.+...++..++..|.. ++++|++..++.+.+..+|.+++..+...... ....+||
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~R~~~~~~~~~~~~~g~~l~~~~~~~l~~~~~~~~~~~g~~ 173 (437)
T TIGR00792 94 SATGKLVYAYITYILLGLFYSFVNIPYWSLVPAITLDPRERESLSTFRRFGATLGGLLVAVIVLPLVSYFGGGDDKFGWF 173 (437)
T ss_pred CcchHHHHHHHHHHHHHHHHHhhcccHhhCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccccHH
Confidence 456667788889988888778888888987 56889999999999988888776554333221 1245899
Q ss_pred HHHHHHHHHHHHHHHHHHhhccCC
Q 005249 163 LMLGVLSIPALLYFAFAVFFLPES 186 (706)
Q Consensus 163 ~~FlI~ail~LV~~ll~~lflpEs 186 (706)
+.+++.++++++..++.+++.+|.
T Consensus 174 ~~~~i~~~l~~~~~~~~~~~~~e~ 197 (437)
T TIGR00792 174 MFALVLALIGVVSLIICFFGTKER 197 (437)
T ss_pred HHHHHHHHHHHHHHHHHHcCCEec
Confidence 999999988888776666666665
No 84
>TIGR00901 2A0125 AmpG-related permease.
Probab=99.84 E-value=1.3e-18 Score=185.72 Aligned_cols=160 Identities=17% Similarity=0.194 Sum_probs=128.7
Q ss_pred HHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhh-----CChHH-HHHHHHHHHHHHHHHHhh---hh
Q 005249 23 ATIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWL-----GRRPM-LILSSVLYFVSGLVMLWS---PN 93 (706)
Q Consensus 23 ~iis~~lp~I~q~fGLS~s~igLl~S~~~Ig~~Igsl~~G~LaDR~-----GRRrv-Llig~iL~aIgsll~a~a---~s 93 (706)
..+++..|.+.+++|+|.++.+++.++ .+..++ .+++|.++||+ ||||. ++.+.++.+++.++.++. .+
T Consensus 5 ~~~~~~~~~~~~~~g~s~~~~g~~~~~-~~~~~~-~~~~g~~~Dr~~~~~~Grr~~~l~~~~~~~~~~~~~l~~~~~~~~ 82 (356)
T TIGR00901 5 GLVGNTLPYWLRSKNVSLKTIGFFSLV-GLPYSL-KFLWSPLVDTVYLPFFGRRRSWLVLTQVLLLSLLLILSFLVPSTD 82 (356)
T ss_pred hhHHhHHHHHHHHcCCCHHHHHHHHHH-HHHHHH-HHHHHHHHhcccCCCCCccHHHHHHHHHHHHHHHHHHHcCCcchh
Confidence 456778899999999999999999755 555555 89999999998 89987 457777777777777776 46
Q ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCcchhhHHhHHHHHHHHHHHHHHHHHHHHHHHhccch--------hhHHH
Q 005249 94 VYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPS--------WRLML 165 (706)
Q Consensus 94 ~~lLli~R~L~GIg~G~~~~~~~a~IsE~fP~k~Rg~a~Gi~~ag~~LG~alg~ll~~~l~l~~~~G--------WR~~F 165 (706)
.+.+.+..++.+++.+...+...+++.|++|+++|+++.++...+..+|.++++.+.... ....+ ||..|
T Consensus 83 l~~l~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l--~~~~g~~~~~~~~wr~~f 160 (356)
T TIGR00901 83 LPLLAGLAFLIAFFSATQDIALDAWRLEILSDEELGYGSTIYIVGYRAGMLLSGSLALVL--ASPEFANTGLITLWGYIF 160 (356)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhhchHHHHHHHHHHHHHHHHHHHHHHH--hhhcccccccccccHHHH
Confidence 667777788888888888899999999999999999999999999999999986655433 23335 99999
Q ss_pred HHHHHHHHHHHHHHHhhccCC
Q 005249 166 GVLSIPALLYFAFAVFFLPES 186 (706)
Q Consensus 166 lI~ail~LV~~ll~~lflpEs 186 (706)
++.+++.++..++.++..||+
T Consensus 161 ~i~ai~~l~~~~~~~~~~~e~ 181 (356)
T TIGR00901 161 FWTALLILPGLLVTLFLAKEP 181 (356)
T ss_pred HHHHHHHHHHHHHHHHhccCC
Confidence 999887777555544455664
No 85
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=99.84 E-value=1.6e-19 Score=205.45 Aligned_cols=182 Identities=13% Similarity=0.114 Sum_probs=155.6
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhCChHHHHHHHHHHH
Q 005249 3 GAALVAIAATIGNFLQGWDNATIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYF 82 (706)
Q Consensus 3 r~~liliil~L~~fl~gl~~~iis~~lp~I~q~fGLS~s~igLl~S~~~Ig~~Igsl~~G~LaDR~GRRrvLlig~iL~a 82 (706)
+-|.+++..++..+...-....++.+.+.++++++.+.++++|+.++....+.+..++.+.+.||+|.|.+.++|.++..
T Consensus 43 ~gWvV~~a~fl~~~~~~g~~~~~Gv~~~~~~~~f~~s~~~~~~i~sl~~~~~~~~gpl~s~l~~rfg~R~v~i~G~~v~~ 122 (509)
T KOG2504|consen 43 WGWVVVFASFLVNLSTDGLINSFGLLFEELMDYFGSSSSQIAWIGSLLLGVYLLAGPLVSALCNRFGCRTVMIAGGLVAA 122 (509)
T ss_pred eeeeeeHhHHHHHHhhhcchheehhhHHHHHHHhCCCccHHHHHHHHHHHHHHHhccHHHHHHhhcCchHHHHHHHHHHH
Confidence 34666666666666666556666778899999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhhhHHHHHHH-HHHHHHHHHhHHHHHHHHHHhcCCcchhhHHhHHHHHHHHHHHHHHHHHHHHHHHhccchh
Q 005249 83 VSGLVMLWSPNVYVLCIA-RLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSW 161 (706)
Q Consensus 83 Igsll~a~a~s~~lLli~-R~L~GIg~G~~~~~~~a~IsE~fP~k~Rg~a~Gi~~ag~~LG~alg~ll~~~l~l~~~~GW 161 (706)
++.++..+++++|.+++. -++.|+|.|+.+.+..+.+..+|++ +|+.+.|+...+.++|.++-+ ...-.+....||
T Consensus 123 ~g~~lssF~~~i~~l~lt~gvi~G~G~~~~~~paiviv~~YF~k-kR~lA~Gia~~GsG~G~~~~~--~l~~~l~~~~G~ 199 (509)
T KOG2504|consen 123 LGLLLSSFATSLWQLYLTFGVIGGLGLGLIYLPAVVILGTYFEK-KRALATGIAVSGTGVGTVVFP--PLLKYLLSKYGW 199 (509)
T ss_pred HHHHHHHHHhhHHHHHHHHHHHhhccchhhhcchhhhhhhHhHH-HHHHHHhhhhccCCcceeeHH--HHHHHHHHHhCc
Confidence 999999999999998876 7899999999999999999988875 599999999999999999873 334445677899
Q ss_pred hHHHHHHHHHHHHHHHHHHhhccCCc
Q 005249 162 RLMLGVLSIPALLYFAFAVFFLPESP 187 (706)
Q Consensus 162 R~~FlI~ail~LV~~ll~~lflpEsp 187 (706)
|+.+++.+.+.+-.++.....-|.+|
T Consensus 200 r~~~l~~~~~~l~~~~~~~~~rp~~~ 225 (509)
T KOG2504|consen 200 RGALLIFGGISLNVLVAGALLRPLSP 225 (509)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCc
Confidence 99999999988776666656555553
No 86
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.84 E-value=1.8e-18 Score=212.75 Aligned_cols=176 Identities=14% Similarity=0.085 Sum_probs=126.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHH-HHHHHcCCCh-hHHHHHHHHHHHHHHHHHHHHHHHhhhhCChHHHHH---HHHHHH
Q 005249 8 AIAATIGNFLQGWDNATIAGAIV-YIKKDLNLGT-TVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLIL---SSVLYF 82 (706)
Q Consensus 8 liil~L~~fl~gl~~~iis~~lp-~I~q~fGLS~-s~igLl~S~~~Ig~~Igsl~~G~LaDR~GRRrvLli---g~iL~a 82 (706)
++..+++.+.+++....+..+.. .+..+.+.+. ...++..+++.++++++++++|+++||+|||+++.. +.++.+
T Consensus 17 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~G~laDr~~rk~~~~~~~~~~~~~~ 96 (1140)
T PRK06814 17 FWTQFFGAFNDNFLKNALVILILYGLSGALGAYNNALVTLAGAVFILPFFIFSALAGQLADKYDKAKLAKILKFAEIGIA 96 (1140)
T ss_pred HHHHHHhHHHHHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHHHHHhhhHHhhhhhccHHHHHHHHHHHHHHHH
Confidence 33444445544544444433333 2333344333 457888999999999999999999999999997633 223333
Q ss_pred HHHHHHHhhhhHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCcchhhHHhHHHHHHHHHHHHHHHHHHHHHHHhccchhh
Q 005249 83 VSGLVMLWSPNVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSWR 162 (706)
Q Consensus 83 Igsll~a~a~s~~lLli~R~L~GIg~G~~~~~~~a~IsE~fP~k~Rg~a~Gi~~ag~~LG~alg~ll~~~l~l~~~~GWR 162 (706)
+..++....++++.++++|+++|++.+...|+..+++.+++|+++|++++|+.+++..+|.++|+.+...+ ....+|+
T Consensus 97 ~~~~~~~~~~s~~~l~~~~~l~gi~~a~~~p~~~a~l~~~~~~~~~~~a~~~~~~~~~ig~~igp~l~g~l--~~~~~~~ 174 (1140)
T PRK06814 97 ALAIYGFHLNSVPLLFAALFLMGIHSALFGPIKYSILPDHLNKDELLGANALVEAGTFIAILLGTIIGGLA--TISGNFV 174 (1140)
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHHHHHhhchHHHHhhHhhcCccccchhhHHHHHHHHHHHHHHHHHHHHH--HhccccH
Confidence 33333334589999999999999999999999999999999999999999999999999999996666544 3456999
Q ss_pred HHHHHHHHHHHHHHHHHHhhccCC
Q 005249 163 LMLGVLSIPALLYFAFAVFFLPES 186 (706)
Q Consensus 163 ~~FlI~ail~LV~~ll~~lflpEs 186 (706)
+.|++.+++.++ +++..++++++
T Consensus 175 ~~~~~~~~~~~~-~~~~~~~~~~~ 197 (1140)
T PRK06814 175 ILVALLMGIAVL-GWLASLFIPKT 197 (1140)
T ss_pred HHHHHHHHHHHH-HHHHHhhCCCC
Confidence 998444444444 33444556654
No 87
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=99.83 E-value=1.9e-17 Score=186.62 Aligned_cols=166 Identities=9% Similarity=0.056 Sum_probs=141.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH-H--cCCChhHHHHHHHHHHHHHHHHHHHHHHHhhh-hCChHHHHHHHHHHHHH
Q 005249 9 IAATIGNFLQGWDNATIAGAIVYIKK-D--LNLGTTVEGLVVAMSLIGATAITTCSGPISDW-LGRRPMLILSSVLYFVS 84 (706)
Q Consensus 9 iil~L~~fl~gl~~~iis~~lp~I~q-~--fGLS~s~igLl~S~~~Ig~~Igsl~~G~LaDR-~GRRrvLlig~iL~aIg 84 (706)
..+++..++..+....+.+.+|.+.+ + +|++..+.+++.+.+.+++.++++++|+++|| +|||+++.++.++.+++
T Consensus 13 ~~l~~~~~~~~~~~~~~~~~L~~yl~~~~~lg~s~~~ag~~~~~~~~~~~~~~~~~G~laDr~~G~~~~l~~~~~~~~~g 92 (475)
T TIGR00924 13 FTLFFVELWERFSYYGMQGILAVYLVQQAGLGFSQEQAFIIFGAYSALVYLLTSVGWWFGDRVWGTKKTMVLGGIVLMLG 92 (475)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHhhcchHHHHHHHHHHHHHH
Confidence 44455666666776666677776654 4 89999999999999999999999999999999 89999999999999999
Q ss_pred HHHHHhhhhHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCcch---hhHHhHHHHHHHHHHHHHHHHHHHHHHHhccchh
Q 005249 85 GLVMLWSPNVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEI---RGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSW 161 (706)
Q Consensus 85 sll~a~a~s~~lLli~R~L~GIg~G~~~~~~~a~IsE~fP~k~---Rg~a~Gi~~ag~~LG~alg~ll~~~l~l~~~~GW 161 (706)
.++++++++++.++++|++.|++.|...+...+++++++|+++ |+.+.++++.+.++|.++|+.+... ..+..+|
T Consensus 93 ~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~niG~~ig~~l~g~--l~~~~g~ 170 (475)
T TIGR00924 93 HFMLAMSIYPDLIFYGLGTIAVGSGLFKANPSSMVGKLYERGDMPRRDGGFTLFYMSINIGSFISPLLAGV--IAENYGY 170 (475)
T ss_pred HHHHHhcccHhHHHHHHHHHHhccccccCCHHHHHHHhcCCCCcccccceehhHHHHHHHHHHHHHHHHHH--HHHhcCh
Confidence 9999999999999999999999999999999999999998764 8889999999999999999655543 3455699
Q ss_pred hHHHHHHHHHHHHHH
Q 005249 162 RLMLGVLSIPALLYF 176 (706)
Q Consensus 162 R~~FlI~ail~LV~~ 176 (706)
++.|.+.++..++..
T Consensus 171 ~~~f~~~~~~~~~~~ 185 (475)
T TIGR00924 171 HVGFNLAAVGMVIGL 185 (475)
T ss_pred HHHHHHHHHHHHHHH
Confidence 999988776555433
No 88
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.82 E-value=1.6e-16 Score=172.50 Aligned_cols=175 Identities=11% Similarity=-0.042 Sum_probs=128.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChhHHHHH--HHHHHHHHHHHHHHH-HHHhhhhCChHHHHHHHHHH-HH
Q 005249 8 AIAATIGNFLQGWDNATIAGAIVYIKKDLNLGTTVEGLV--VAMSLIGATAITTCS-GPISDWLGRRPMLILSSVLY-FV 83 (706)
Q Consensus 8 liil~L~~fl~gl~~~iis~~lp~I~q~fGLS~s~igLl--~S~~~Ig~~Igsl~~-G~LaDR~GRRrvLlig~iL~-aI 83 (706)
.+.++..++..++..+...+.+|.+.++.|++.+++|++ .++..+...+.+++. ++..||+||||..+++..+. ++
T Consensus 3 ~~~~~~ly~~~g~~~~~~~p~lp~~l~~~g~~~~~iGl~~~~~l~~~~~~l~~p~~~~~~~~~~g~r~~~i~~~~~~~~~ 82 (390)
T TIGR02718 3 VITLGLLYLSQGIPIGLAMDALPTLLREDGAPLTALAFLPLVGLPWVVKFLWAPLVDNWWSWRLGRRRSWVLPMQCLVSA 82 (390)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhccccccCCcchhHHHHHHHHHHH
Confidence 455677788999999999999999999999999999997 356677777778777 55799999999876555332 22
Q ss_pred HHHHHH-h--hhh-HHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCcchhhHHhHHHHHHHHHHHHHHHHHHHHHHHhccc
Q 005249 84 SGLVML-W--SPN-VYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASP 159 (706)
Q Consensus 84 gsll~a-~--a~s-~~lLli~R~L~GIg~G~~~~~~~a~IsE~fP~k~Rg~a~Gi~~ag~~LG~alg~ll~~~l~l~~~~ 159 (706)
+....+ + ..+ ...++...++.++..+...+....+..|..++++++...+....+..+|.+++..+.. ...+..
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~d~~~d~~~~~~~~~~~~~~~~~~~~~g~~lG~~~g~~~~~--~l~~~~ 160 (390)
T TIGR02718 83 CLASLALVGPDVAGAGWAVGLLACASLASATQDIATDGMAAEHFNGRTLAKGNAVQIAGVMIGFFGGGAGTL--VLFGKF 160 (390)
T ss_pred HHHHHHcCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhhhHHHHHHHHHHHHHHHHHHHHHH--HHHHHh
Confidence 222222 1 222 3344445566667777777888889999999998999999988888999999854433 334566
Q ss_pred hhhHHHHHHHHHHHHHHHHHHhhcc
Q 005249 160 SWRLMLGVLSIPALLYFAFAVFFLP 184 (706)
Q Consensus 160 GWR~~FlI~ail~LV~~ll~~lflp 184 (706)
|||..|++.+++.++..+..++..+
T Consensus 161 gw~~~f~~~a~l~~~~~~~~~~~~~ 185 (390)
T TIGR02718 161 GQRPAFLLVACVPLASLVCVLWLKD 185 (390)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 9999999999888776655433333
No 89
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=99.81 E-value=4.1e-17 Score=184.84 Aligned_cols=174 Identities=13% Similarity=0.097 Sum_probs=136.6
Q ss_pred HHHHHHHHHHHHHHHHHHHH-HHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhhh-hCChHHHHHHHHHHHHHH
Q 005249 8 AIAATIGNFLQGWDNATIAG-AIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDW-LGRRPMLILSSVLYFVSG 85 (706)
Q Consensus 8 liil~L~~fl~gl~~~iis~-~lp~I~q~fGLS~s~igLl~S~~~Ig~~Igsl~~G~LaDR-~GRRrvLlig~iL~aIgs 85 (706)
+..+++..+...+..+.+.+ ...++.+++|++..+.+++.+.+.+...+..+++|+++|| +||||+++++.++++++.
T Consensus 16 ~~~~~~~~~~er~~~y~~~~~l~~yl~~~lg~~~~~a~~i~~~~~~~~~~~~~~~G~laDr~~G~r~~~~~g~~~~~~g~ 95 (489)
T PRK10207 16 FFMIFFVELWERFGYYGVQGILAVFFVKQLGFSQEQAFITFGAFAALVYGLISIGGYVGDHLLGTKRTIVLGAIVLAIGY 95 (489)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhHHHhhhhccchHHHHHHHHHHHHHHH
Confidence 33444444445454444443 3456778899999999999999998888888999999999 999999999999999999
Q ss_pred HHHHhhhhHHH-HHHHHHHHHHHHHhHHHHHHHHHHhcCCcc--hhhHHhHHHHHHHHHHHHHHHHHHHHHHHhccchhh
Q 005249 86 LVMLWSPNVYV-LCIARLLDGFGVGLAVTLVPLYISETAPSE--IRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSWR 162 (706)
Q Consensus 86 ll~a~a~s~~l-Lli~R~L~GIg~G~~~~~~~a~IsE~fP~k--~Rg~a~Gi~~ag~~LG~alg~ll~~~l~l~~~~GWR 162 (706)
++++++.+... ++++|+++|+|.|...+...+++.|++|++ +|..+++++..+.++|.++++.+.... .+..|||
T Consensus 96 ~~~~~~~~~~~ll~~~~~l~~ig~g~~~~~~~~li~~~~p~~~~~~~~~~~~~~~~~nig~~~g~~l~g~l--~~~~gw~ 173 (489)
T PRK10207 96 FMTGMSLLKPDLIFIALGTIAVGNGLFKANPASLLSKCYPPKDPRLDGAFTLFYMSINIGSLISLSLAPVI--ADKFGYS 173 (489)
T ss_pred HHHHHhccchhHHHHHHHHHHhccccccCCHHHHHHHhcCCCchhhhcchhHHHHHHHHHHHHHHHHHHHH--HHhhChH
Confidence 99998876444 557899999999999999999999999887 457799999999999999996555444 4556999
Q ss_pred HHHHHHHHHHHHHHHHHHhhcc
Q 005249 163 LMLGVLSIPALLYFAFAVFFLP 184 (706)
Q Consensus 163 ~~FlI~ail~LV~~ll~~lflp 184 (706)
+.|++.++ +++..++.+.+.+
T Consensus 174 ~~F~i~~i-~~~~~~~~~~~~~ 194 (489)
T PRK10207 174 VTYNLCGA-GLIIALLVYFACR 194 (489)
T ss_pred HHHHHHHH-HHHHHHHHHHHcc
Confidence 99988655 3343444444444
No 90
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=99.80 E-value=3.6e-17 Score=182.89 Aligned_cols=165 Identities=16% Similarity=0.205 Sum_probs=142.8
Q ss_pred HHHHHHHHHHHHHHHHcCCChhH-HHHHHHHHHHHHHHHHHHHHHHhhhhCChHHHHHHHHHHHHHHHHHHhhhhHHHHH
Q 005249 20 WDNATIAGAIVYIKKDLNLGTTV-EGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVMLWSPNVYVLC 98 (706)
Q Consensus 20 l~~~iis~~lp~I~q~fGLS~s~-igLl~S~~~Ig~~Igsl~~G~LaDR~GRRrvLlig~iL~aIgsll~a~a~s~~lLl 98 (706)
--+..++.+.|++.+++|++..+ .|.+.++++.+|+++.+++|+++||+|.|+++.++.+.+++..++.++++++..+.
T Consensus 40 e~R~n~s~a~p~L~~elglT~~qv~G~I~s~F~ysYal~qIp~GlLaDrlG~K~vL~l~~l~Wsl~t~L~~fa~Sl~~L~ 119 (511)
T TIGR00806 40 QFRPGESFITPYLLTVLNFTEETVTNEIIPVLPYSHLAVLVPVFLLTDYLRYKPVLVLQALSFVCVWLLLLLGTSVWHMQ 119 (511)
T ss_pred HhhchHHHHHHHHHHHcCCCHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34666788899999999999999 99999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhHHHHHHHHHHhcCCcchhhHHhHHHHHHHHHHHHHHHHHHHHHHHhccchhhHHHHHH--HHHHHHHH
Q 005249 99 IARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSWRLMLGVL--SIPALLYF 176 (706)
Q Consensus 99 i~R~L~GIg~G~~~~~~~a~IsE~fP~k~Rg~a~Gi~~ag~~LG~alg~ll~~~l~l~~~~GWR~~FlI~--ail~LV~~ 176 (706)
++|++.|++.|..+ +...++..|+|+++|+++.|+..++..+|.++++++... ....|||..+.+. .+.+....
T Consensus 120 i~R~llGvaEA~~~-A~~syI~~WfP~kER~ratsi~~sg~~vG~~Ia~~L~ql---l~s~gWr~y~~Ln~Isl~s~~~a 195 (511)
T TIGR00806 120 LMEVFYSVTMAARI-AYSSYIFSLVPPSRYQRAAAYSRAAVLLGVFLSSVLGQL---LVTLGWISYSTLNIISLVFMTFS 195 (511)
T ss_pred HHHHHHHHHHHHHH-HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHhcCchhHHHHHHHHHHHHHHH
Confidence 99999999999999 999999999999999999999999999999999776655 2345888755432 22333334
Q ss_pred HHHHhhccCCch
Q 005249 177 AFAVFFLPESPR 188 (706)
Q Consensus 177 ll~~lflpEsp~ 188 (706)
++.-+++|..++
T Consensus 196 ~~~a~~LP~~~~ 207 (511)
T TIGR00806 196 VFLALFLKRPKR 207 (511)
T ss_pred HHHHHhCCCCch
Confidence 455677885543
No 91
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=99.78 E-value=4.3e-16 Score=169.75 Aligned_cols=172 Identities=19% Similarity=0.125 Sum_probs=149.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhCChHHHHHHHHHHHHH
Q 005249 5 ALVAIAATIGNFLQGWDNATIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVS 84 (706)
Q Consensus 5 ~liliil~L~~fl~gl~~~iis~~lp~I~q~fGLS~s~igLl~S~~~Ig~~Igsl~~G~LaDR~GRRrvLlig~iL~aIg 84 (706)
.+..+.++..+++.++......+.+|.+++.|+++..+.+++..+++.+|.+++++.|++.+|+|+|+.+++|..+++++
T Consensus 12 ~~~~v~~t~lFfl~G~~~~l~diLip~l~~~f~ls~~~a~liqfaff~gYf~~~lpa~~~~kk~gyk~gi~lgL~l~avg 91 (422)
T COG0738 12 KLAFVLLTSLFFLWGFITCLNDILIPHLKEVFDLTYFEASLIQFAFFGGYFIMSLPAGLLIKKLGYKAGIVLGLLLYAVG 91 (422)
T ss_pred eeHHHHHHHHHHHHHHHhhcchhhHHHHHHHhCccHHHHHHHHHHHHHHHHHHhccHHHHHHHhhhHHHHHHHHHHHHHH
Confidence 34566777778888888899899999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHH---hhhhHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCcchhhHHhHHHHHHHHHHHHHHHHHHHHHHHh-----
Q 005249 85 GLVML---WSPNVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLL----- 156 (706)
Q Consensus 85 sll~a---~a~s~~lLli~R~L~GIg~G~~~~~~~a~IsE~fP~k~Rg~a~Gi~~ag~~LG~alg~ll~~~l~l~----- 156 (706)
++++. ...+|..++++-++.|.|.+...+.+..+++...+++.-...+++.+.++++|+++++++...+...
T Consensus 92 ~~lF~pAa~~~~y~~FL~~lFila~Gi~~LetaaNp~v~~lg~~~~a~~rlnl~q~fn~lGa~~gp~~g~~lils~~~~~ 171 (422)
T COG0738 92 AALFWPAASSKSYGFFLVALFILASGIGLLETAANPYVTLLGKPESAAFRLNLAQAFNGLGAILGPLLGSSLILSGVALT 171 (422)
T ss_pred HHHHhhhhhhhhHHHHHHHHHHHHhhhHHHHhccchHHHHhCCchhHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhhhc
Confidence 99985 4568999999999999999999999999999999999899999999999999999998777655441
Q ss_pred ------------ccchhhHHHHHHHHHHHHHH
Q 005249 157 ------------ASPSWRLMLGVLSIPALLYF 176 (706)
Q Consensus 157 ------------~~~GWR~~FlI~ail~LV~~ 176 (706)
....|+.+|.+.+...++..
T Consensus 172 ~~~~~~~~~~~~~~~~v~~pYl~~~~~lvll~ 203 (422)
T COG0738 172 MSAAQILAIKGADASSVQFPYLILAGLLVLLA 203 (422)
T ss_pred cCHHHHHHHHHHHHHhhhhHHHHHHHHHHHHH
Confidence 01146777766666555533
No 92
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=99.78 E-value=1.2e-15 Score=172.44 Aligned_cols=176 Identities=13% Similarity=0.104 Sum_probs=135.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhh----hhCChHHHHH-HHHHHHHHHH
Q 005249 12 TIGNFLQGWDNATIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISD----WLGRRPMLIL-SSVLYFVSGL 86 (706)
Q Consensus 12 ~L~~fl~gl~~~iis~~lp~I~q~fGLS~s~igLl~S~~~Ig~~Igsl~~G~LaD----R~GRRrvLli-g~iL~aIgsl 86 (706)
+...+...+......+.++.+.+++|++....+++..+..+..++.+++.|+++| |+||||.+++ +.+...++.+
T Consensus 10 ~~~~~Giq~~~~l~~~~l~~yl~~lg~~~~~~~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~GRRrp~il~g~~~~~~~l~ 89 (477)
T TIGR01301 10 ASVAAGVQFGWALQLSLLTPYVQELGIPHAWASIIWLCGPLSGLLVQPLVGYLSDRCTSRFGRRRPFIAAGAALVAFAVI 89 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhHeeehhcCCCCCCCChHHHHHHHHHHHHHHHH
Confidence 3333334444555566667788999999999999999999999999999999999 5999999886 4666667767
Q ss_pred HHHhhhhHH-----------------HHHHHHHHHHHHHHhHHHHHHHHHHhcCCcchh--hHHhHHHHHHHHHHHHHHH
Q 005249 87 VMLWSPNVY-----------------VLCIARLLDGFGVGLAVTLVPLYISETAPSEIR--GRLNTLPQFTGSGGMFLAY 147 (706)
Q Consensus 87 l~a~a~s~~-----------------lLli~R~L~GIg~G~~~~~~~a~IsE~fP~k~R--g~a~Gi~~ag~~LG~alg~ 147 (706)
+++++++.. .++++-.+..++.....++..++++|.+|+++| +.+.++.+.+.++|.++|+
T Consensus 90 ll~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~lld~~~n~~~~p~rALiaDl~p~~~~~~~~a~~~~~~~~~lG~ilg~ 169 (477)
T TIGR01301 90 LIGFAADIGHLFGDNLDKKTKPRAIIVFVVGFWILDVANNMLQGPCRAFLADLTGGDARRTRIANAYFSFFMAIGNVLGY 169 (477)
T ss_pred HHHhCchhhhhccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCchhHHHHHHHHHHHHHHHHHHHHHH
Confidence 777765542 233344455668888888899999999998865 5799999999999999997
Q ss_pred HHHHHHHHhc-------------cchhhHHHHHHHHHHHHHHHHHHhhccCCc
Q 005249 148 CMVFGMSLLA-------------SPSWRLMLGVLSIPALLYFAFAVFFLPESP 187 (706)
Q Consensus 148 ll~~~l~l~~-------------~~GWR~~FlI~ail~LV~~ll~~lflpEsp 187 (706)
.......... ..+.|..|++.+++.++..++..++++|.|
T Consensus 170 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~F~i~a~~l~i~~l~t~~~v~E~~ 222 (477)
T TIGR01301 170 AAGAYSGLYKIFPFTKTEACGVSCANLKSCFLIDIILLAILTYIALSAVKENP 222 (477)
T ss_pred HHHHHHhHHHhcccccccccccccchHHHHHHHHHHHHHHHHHHHeeeeeccC
Confidence 7765431111 026789999999888888888888888874
No 93
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.77 E-value=1.7e-15 Score=173.14 Aligned_cols=164 Identities=18% Similarity=0.160 Sum_probs=135.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhCChHHHHHHHHHHHHHHHHHH
Q 005249 10 AATIGNFLQGWDNATIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVML 89 (706)
Q Consensus 10 il~L~~fl~gl~~~iis~~lp~I~q~fGLS~s~igLl~S~~~Ig~~Igsl~~G~LaDR~GRRrvLlig~iL~aIgsll~a 89 (706)
.++++.++..++..+.....+.+..+..-|+..++++..+..+..++.++++|.++||+.||++++.+-++.++..++.+
T Consensus 14 ~lw~a~~iS~lG~~~~~va~~wlv~~lt~S~~~valv~~a~~LP~~Llsl~aG~laDr~drrrili~~~~~~~~~~~~L~ 93 (524)
T PF05977_consen 14 RLWIAQLISNLGDWMQTVALAWLVTQLTGSPLMVALVQAASTLPILLLSLFAGALADRFDRRRILILSQLLRALVALLLA 93 (524)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHHHH
Confidence 34566667777777777777888888888999999999999999999999999999999999999998887766554444
Q ss_pred h-----hhhHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCcchhhHHhHHHHHHHHHHHHHHHHHHHHHHHhccchhhHH
Q 005249 90 W-----SPNVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSWRLM 164 (706)
Q Consensus 90 ~-----a~s~~lLli~R~L~GIg~G~~~~~~~a~IsE~fP~k~Rg~a~Gi~~ag~~LG~alg~ll~~~l~l~~~~GWR~~ 164 (706)
+ ..+.+.+++.-++.|++.+...|...+++.|..|+++...++++.+...++..++|+.++.... ...|-.++
T Consensus 94 ~l~~~~~~~~~~Ll~~~fl~g~~~a~~~PA~~A~ip~lV~~~~L~~A~al~s~~~niar~iGPalgG~Lv--a~~G~~~~ 171 (524)
T PF05977_consen 94 VLAFFGLLSPWLLLILTFLLGIGSAFFNPAWQAIIPELVPKEDLPAANALNSISFNIARIIGPALGGILV--AFFGAAAA 171 (524)
T ss_pred HHHHhCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHhhHHHHHHHHHHHHHHHHhccchHHHHHH--HHHHHHHH
Confidence 3 2478899999999999999999999999999999999999999999999999999966554443 33466678
Q ss_pred HHHHHHHHHHH
Q 005249 165 LGVLSIPALLY 175 (706)
Q Consensus 165 FlI~ail~LV~ 175 (706)
|++.++..++.
T Consensus 172 f~inalsfl~~ 182 (524)
T PF05977_consen 172 FLINALSFLIS 182 (524)
T ss_pred HHHHHHHHHHH
Confidence 87776655543
No 94
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=99.76 E-value=1.4e-15 Score=172.51 Aligned_cols=165 Identities=13% Similarity=0.165 Sum_probs=128.4
Q ss_pred HHHHHHHHHHHHHHHHHHHH-HHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhhh-hCChHHHHHHHHHHHHHHHH
Q 005249 10 AATIGNFLQGWDNATIAGAI-VYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDW-LGRRPMLILSSVLYFVSGLV 87 (706)
Q Consensus 10 il~L~~fl~gl~~~iis~~l-p~I~q~fGLS~s~igLl~S~~~Ig~~Igsl~~G~LaDR-~GRRrvLlig~iL~aIgsll 87 (706)
.+++..+...+....+...+ .++.+++|++..+.+++.+.+........+++|+++|| +|||++++++.++.+++.++
T Consensus 25 ~~~~~~~~~~~~~y~~~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~~~~G~LaDr~~G~r~~~~~g~~~~~ig~~l 104 (500)
T PRK09584 25 LIFSIELWERFGYYGLQGIMAVYLVKQLGMSEADSITLFSSFSALVYGLVAIGGWLGDKVLGTKRVIMLGAIVLAIGYAL 104 (500)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHH
Confidence 33444444545444444444 45668999999999888888776666667789999999 59999999999999999999
Q ss_pred HHhhh-hHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCcch--hhHHhHHHHHHHHHHHHHHHHHHHHHHHhccchhhHH
Q 005249 88 MLWSP-NVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEI--RGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSWRLM 164 (706)
Q Consensus 88 ~a~a~-s~~lLli~R~L~GIg~G~~~~~~~a~IsE~fP~k~--Rg~a~Gi~~ag~~LG~alg~ll~~~l~l~~~~GWR~~ 164 (706)
+++++ +.+.++++|++.|++.|...+...+++.+++|+++ |..++++++.+.++|.++++.+.... .+..|||+.
T Consensus 105 ~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~l~~~~f~~~~~~~~~~~~~~~~~~~iG~~~gp~i~g~l--~~~~g~~~~ 182 (500)
T PRK09584 105 VAWSGHDAGIVYMGMATIAVGNGLFKANPSSLLSTCYEKDDPRLDGAFTMYYMSINIGSFFSMLATPWL--AAKYGWSVA 182 (500)
T ss_pred HHHhcccHHHHHHHHHHHHHhhhcccCCHHHHHHHhcCCCchhhhhcchHHHHHHHHHHHHHHHHHHHH--HHhhCHHHH
Confidence 98874 56667788999999999988888899999998653 45688899999999999996655443 456699999
Q ss_pred HHHHHHHHHHHH
Q 005249 165 LGVLSIPALLYF 176 (706)
Q Consensus 165 FlI~ail~LV~~ 176 (706)
|.+.++..++.+
T Consensus 183 F~i~~i~~~i~~ 194 (500)
T PRK09584 183 FALSVVGMLITV 194 (500)
T ss_pred HHHHHHHHHHHH
Confidence 998776544433
No 95
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=99.76 E-value=7e-15 Score=169.39 Aligned_cols=171 Identities=19% Similarity=0.236 Sum_probs=134.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhCChHHHHHHHHHHHHHHHHHHh
Q 005249 11 ATIGNFLQGWDNATIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVMLW 90 (706)
Q Consensus 11 l~L~~fl~gl~~~iis~~lp~I~q~fGLS~s~igLl~S~~~Ig~~Igsl~~G~LaDR~GRRrvLlig~iL~aIgsll~a~ 90 (706)
.++.....++.....+..++.+.+++|-+ ....|+.+...++.+++.++.|.++|.||||.+++++.++..+|.++++.
T Consensus 49 ~~~~~~~~~~~~~~~a~~l~~I~~diG~~-~~~~w~~~~~~l~~av~~~~~G~LSDlfGRr~~~i~g~~l~vvG~Iv~at 127 (599)
T PF06609_consen 49 FSLAVIAAYFVLVLPASILPYINADIGGS-DNWSWFSTAWTLASAVSFPFVGRLSDLFGRRYFFIIGSLLGVVGSIVCAT 127 (599)
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHhcCCC-ccchHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHhHHHHhhc
Confidence 44444444455555566788999999976 55778999999999999999999999999999999999999999999999
Q ss_pred hhhHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCcchhhHHhHHHHHHHHHHHHHHHHHHHHHHHhccchhhHHHHHHHH
Q 005249 91 SPNVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSWRLMLGVLSI 170 (706)
Q Consensus 91 a~s~~lLli~R~L~GIg~G~~~~~~~a~IsE~fP~k~Rg~a~Gi~~ag~~LG~alg~ll~~~l~l~~~~GWR~~FlI~ai 170 (706)
++|...++++..+.|+|.|.... ....++|..|.|.|+...++.....-+...+++... .......+|||.|++.++
T Consensus 128 A~~~~~~iag~~l~GvgaG~~~~-~~~~isEl~p~k~R~~~~~~~~~~~i~~~~~~~~ia--~~~~~~~~WRw~~~~~~i 204 (599)
T PF06609_consen 128 AQNMNTFIAGMVLYGVGAGVQEL-AALAISELVPNKWRGLGLAIASIPFIITTWISPLIA--QLFAAHSGWRWIFYIFII 204 (599)
T ss_pred CCcHHHHHHHHHHHHHhhHHHHH-HHHHHHHhcccchhhhHhHHHHHHHHhhhcccHHHH--HHhccCCCcchHHHHHHH
Confidence 99999999999999999887754 456689999999998877766655444443442222 222345699999999999
Q ss_pred HHHHHHHHHHhhccC
Q 005249 171 PALLYFAFAVFFLPE 185 (706)
Q Consensus 171 l~LV~~ll~~lflpE 185 (706)
+..+.+++.+++...
T Consensus 205 ~~~i~~vl~~~fY~P 219 (599)
T PF06609_consen 205 WSGIALVLIFFFYFP 219 (599)
T ss_pred HHHHHHHHHHHHhCC
Confidence 887777665555543
No 96
>PRK09669 putative symporter YagG; Provisional
Probab=99.75 E-value=1.1e-15 Score=169.68 Aligned_cols=159 Identities=13% Similarity=0.170 Sum_probs=118.4
Q ss_pred HHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhhh----hCCh-HHHHHHHHHHHHHHHHHHhhhh------HH
Q 005249 27 GAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDW----LGRR-PMLILSSVLYFVSGLVMLWSPN------VY 95 (706)
Q Consensus 27 ~~lp~I~q~fGLS~s~igLl~S~~~Ig~~Igsl~~G~LaDR----~GRR-rvLlig~iL~aIgsll~a~a~s------~~ 95 (706)
....++.+.+|++..++|++.++..+.-++..++.|+++|| +||| +.++.+.+..+++.++....++ ++
T Consensus 31 ~l~~~~t~~~gls~~~~g~i~~i~~i~dai~dp~~G~lsD~~~~r~Grrrp~il~~~~~~~i~~~l~f~~p~~~~~~~~~ 110 (444)
T PRK09669 31 FLAYFYTDVFGLSAAIMGTMFLVVRVLDAVTDPLMGALVDRTRTRHGQFRPYLLWFAIPFGVVCLLTFYTPDFGATGKII 110 (444)
T ss_pred HHHHHHHHhcCCCHHHHHHHHHHHHHHHHcccceeeEeeecCCCCCCCcchhHHHHHHHHHHHHHHHHhCCCCCcchHHH
Confidence 34566888899999999999999999999999999999998 7775 5565777777777765554432 45
Q ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHhcC-CcchhhHHhHHHHHHHHHHHHHHHHHHHHHH--Hh---ccchhhHHHHHHH
Q 005249 96 VLCIARLLDGFGVGLAVTLVPLYISETA-PSEIRGRLNTLPQFTGSGGMFLAYCMVFGMS--LL---ASPSWRLMLGVLS 169 (706)
Q Consensus 96 lLli~R~L~GIg~G~~~~~~~a~IsE~f-P~k~Rg~a~Gi~~ag~~LG~alg~ll~~~l~--l~---~~~GWR~~FlI~a 169 (706)
.+++..++.+++......+..++..|+. ++++|.+..++...+..+|..+++.+..... .. ...+|+..+++.+
T Consensus 111 ~~~~~~~l~~~~~t~~~ip~~al~~~~t~~~~eR~~l~~~r~~~~~~G~~i~~~~~~pl~~~~~~~~~~~g~~~~~~i~~ 190 (444)
T PRK09669 111 YACVTYILLSLVYTAINVPYCAMPGAITNDPRERHSLQSWRFALSFIGGLIVSVIALPLVDILGKGDEQKGYFYAMMVMG 190 (444)
T ss_pred HHHHHHHHHHHHHHhhcchHHHhHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHH
Confidence 5666677778777777777889999998 5578999889888888888887755432221 11 1347998888888
Q ss_pred HHHHHHHHHHHhhccC
Q 005249 170 IPALLYFAFAVFFLPE 185 (706)
Q Consensus 170 il~LV~~ll~~lflpE 185 (706)
+++++..++.++..+|
T Consensus 191 ii~~v~~~~~~~~~~e 206 (444)
T PRK09669 191 LLGVVLFFCCFFMTKE 206 (444)
T ss_pred HHHHHHHHHHhCCeEE
Confidence 8877766555444444
No 97
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=99.72 E-value=8.9e-17 Score=187.53 Aligned_cols=179 Identities=16% Similarity=0.166 Sum_probs=151.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhCChHHHHHHHHHHHHHHH
Q 005249 7 VAIAATIGNFLQGWDNATIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGL 86 (706)
Q Consensus 7 iliil~L~~fl~gl~~~iis~~lp~I~q~fGLS~s~igLl~S~~~Ig~~Igsl~~G~LaDR~GRRrvLlig~iL~aIgsl 86 (706)
.++..++..+...+..+.++..++.+.++|+++.++.|++.+.+.++++++.++.++++||+|||+++.++.++++++++
T Consensus 34 ~~~~~~~~~~~~~~~~g~~~~~l~~iek~F~lss~~~G~i~s~~~i~~~~~~i~v~~~~~r~~r~~~i~~g~ll~~lg~l 113 (633)
T TIGR00805 34 FSLLLTCAQLQGLLYNGLVNSSLTTIERRFKLSTSSSGLINGSYEIGNLLLIIFVSYFGTKLHRPIVIGIGCAIMGLGSF 113 (633)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhchhhhhhhCCCCCcceeeeehhhHHHHHHHHHHHHhhcccCcceEEEecHHHHHHHHH
Confidence 34555567777778888888999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhh---------------------------------------------------hHHHHHHHHHHHHHHHHhHHHHH
Q 005249 87 VMLWSP---------------------------------------------------NVYVLCIARLLDGFGVGLAVTLV 115 (706)
Q Consensus 87 l~a~a~---------------------------------------------------s~~lLli~R~L~GIg~G~~~~~~ 115 (706)
++++.+ .+..++++|+++|+|.+..++..
T Consensus 114 l~alphf~~~~y~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~~~~~ 193 (633)
T TIGR00805 114 LLSLPHFLSGRYSYSTTVSSTGNLSSANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGATPIFPLG 193 (633)
T ss_pred HHhChHHhcCCccccccccccccccccccccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhccCCcchhcC
Confidence 998753 25567789999999999999999
Q ss_pred HHHHHhcCCcchhhHHhHHHHHHHHHHHHHHHHHHHHHHHhc-c------------------c-hhhHHHHHHHHHHHHH
Q 005249 116 PLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLA-S------------------P-SWRLMLGVLSIPALLY 175 (706)
Q Consensus 116 ~a~IsE~fP~k~Rg~a~Gi~~ag~~LG~alg~ll~~~l~l~~-~------------------~-GWR~~FlI~ail~LV~ 175 (706)
.+++.|++|+++|++++++++.+..+|.++|+++........ + . +|+..|++.+++.++.
T Consensus 194 ~~~i~d~~~~~~~~~~~~i~~~~~~iG~~lG~llgg~l~~~~~d~~~~~~~~~~l~~~dprWiGaWwl~Fli~g~l~~l~ 273 (633)
T TIGR00805 194 ISYIDDFAKSKNSPLYIGILESIAVFGPAFGYLLGSFCLQIYVDTGSVNTEDVILTPTDPRWIGAWWIGFLICGGVALLT 273 (633)
T ss_pred chhhhccCCccccHHHHHHHHHHHHhhhHHHHHHHHHHHhcccccccCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999977765543210 0 1 3888899988888876
Q ss_pred HHHHHhhccCC
Q 005249 176 FAFAVFFLPES 186 (706)
Q Consensus 176 ~ll~~lflpEs 186 (706)
+++ ++++|+.
T Consensus 274 ~v~-l~~~p~~ 283 (633)
T TIGR00805 274 SIP-FFFFPKA 283 (633)
T ss_pred HHH-HHhCccc
Confidence 654 4455543
No 98
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=99.72 E-value=3.1e-14 Score=157.86 Aligned_cols=174 Identities=21% Similarity=0.226 Sum_probs=126.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhC-ChHHHHHHHHHHHHHHHHHH
Q 005249 11 ATIGNFLQGWDNATIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLG-RRPMLILSSVLYFVSGLVML 89 (706)
Q Consensus 11 l~L~~fl~gl~~~iis~~lp~I~q~fGLS~s~igLl~S~~~Ig~~Igsl~~G~LaDR~G-RRrvLlig~iL~aIgsll~a 89 (706)
++..+++.+...+.+.|.++.+.++.|++..|+|++.++..+..+++++++|.++||++ +|+++.++.++.++..++..
T Consensus 7 Ls~~~f~~f~~~G~~~p~~~~~L~~~G~s~~qIG~l~a~~~~~~i~~~~~~g~~aDr~~~~~~~l~~~~l~~~~~~~~~~ 86 (400)
T PF03825_consen 7 LSLMYFLYFFAYGAFLPYLPLYLESRGFSGTQIGILLAVGPLARIVSPPFWGAIADRFGSAKRILALLSLLSALALLLLA 86 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhHHHHHHHHHHHHHHHHHHHH
Confidence 34555666777777888889999999999999999999999999999999999999986 67788888888888777777
Q ss_pred hhhhHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCcchhhHHhHHHHHHHHHHHHHHHHHHHHHH--HhccchhhHHHHH
Q 005249 90 WSPNVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMS--LLASPSWRLMLGV 167 (706)
Q Consensus 90 ~a~s~~lLli~R~L~GIg~G~~~~~~~a~IsE~fP~k~Rg~a~Gi~~ag~~LG~alg~ll~~~l~--l~~~~GWR~~FlI 167 (706)
..++++.++++.++..+......|...++..+... +++.-.|-.-..+.+|-+++.+...... .....+....+++
T Consensus 87 ~~~~f~~~~~~~~l~~~~~~p~~pl~dsi~~~~~~--~~~~~YG~iRlwGSiGf~~~~~~~~~~~~~~~~~~~~~~~~~i 164 (400)
T PF03825_consen 87 FSSSFWWLFVIMLLFSFFFSPTMPLSDSIALSYLG--DRGKDYGRIRLWGSIGFIVAALAFGGLLGGYLGISGTSLIFYI 164 (400)
T ss_pred HhccHHHHHHHHHHHHHHHccHHHHHHHHHHHHcc--cccCCCCcchhhhhHHHHHHHHHHHHHHHhhhccccccHHHHH
Confidence 88899999888888888888888888888888876 3455566667777777777644321111 1111122334555
Q ss_pred HHHHHHHHHHHHHhhccCCc
Q 005249 168 LSIPALLYFAFAVFFLPESP 187 (706)
Q Consensus 168 ~ail~LV~~ll~~lflpEsp 187 (706)
.++..++.. ...+.+|+.|
T Consensus 165 ~~~~~~ll~-~~~l~lp~~~ 183 (400)
T PF03825_consen 165 AAILSLLLA-GFALFLPKTP 183 (400)
T ss_pred HHHHHHHHH-HHHHhCCCCc
Confidence 555444323 2235567664
No 99
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.71 E-value=4.1e-16 Score=169.25 Aligned_cols=150 Identities=21% Similarity=0.231 Sum_probs=136.4
Q ss_pred HcCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhCChHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhHHHH
Q 005249 35 DLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVMLWSPNVYVLCIARLLDGFGVGLAVTL 114 (706)
Q Consensus 35 ~fGLS~s~igLl~S~~~Ig~~Igsl~~G~LaDR~GRRrvLlig~iL~aIgsll~a~a~s~~lLli~R~L~GIg~G~~~~~ 114 (706)
+.+-+.+++|++.+...+...+.+++.|.+.||+|+|..+++|.+++.+.++++++.+++++++++|.++|+|.+.....
T Consensus 100 ~~~~e~~~iG~LFaskA~~qllvnp~~G~l~~~iGy~ipm~~Gl~vmf~sTilFafg~sy~~l~vAR~LQgvgsA~~~ts 179 (464)
T KOG3764|consen 100 SLDRENTQIGLLFASKALVQLLVNPFFGNLIDRIGYKIPMVAGLFVMFLSTILFAFGNSYPMLFVARSLQGVGSAFADTS 179 (464)
T ss_pred CccccccchhHHHHHHHHHHHHhcccchhhHHHhccccHHHHHHHHHHHHHHHHHHcchhHHHHHHHHHhhhhHHHHHhh
Confidence 45667789999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhcCCcch-hhHHhHHHHHHHHHHHHHHHHHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHhhccCC
Q 005249 115 VPLYISETAPSEI-RGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSWRLMLGVLSIPALLYFAFAVFFLPES 186 (706)
Q Consensus 115 ~~a~IsE~fP~k~-Rg~a~Gi~~ag~~LG~alg~ll~~~l~l~~~~GWR~~FlI~ail~LV~~ll~~lflpEs 186 (706)
..+++++.||.++ |++++|+...+.++|..+|+.. +....+..|.+..|++.++++++..++.++.++.+
T Consensus 180 glamlAd~f~~d~er~~vmGialgfislG~lvgPpf--GGilYe~~Gk~aPFlVL~~v~Lld~~L~l~vi~p~ 250 (464)
T KOG3764|consen 180 GLAMLADVFPEDNERGSVMGIALGFISLGVLVGPPF--GGILYEFAGKSAPFLVLAIVLLLDGALQLLVIEPT 250 (464)
T ss_pred hHHHHHHHcccchhhhHHHHHHHHHHhccceecCCc--ccchHhhcCCcCcHHHHHHHHHHHHHHHHheeCcc
Confidence 9999999999866 7999999999999999999544 44445667999999999999999888877777654
No 100
>PRK10429 melibiose:sodium symporter; Provisional
Probab=99.71 E-value=2e-14 Score=161.47 Aligned_cols=175 Identities=13% Similarity=0.161 Sum_probs=121.6
Q ss_pred HHHHHHHHHHHHHHHHH-HHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhh----hhCC-hHHHHHHHHHHHHHH
Q 005249 12 TIGNFLQGWDNATIAGA-IVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISD----WLGR-RPMLILSSVLYFVSG 85 (706)
Q Consensus 12 ~L~~fl~gl~~~iis~~-lp~I~q~fGLS~s~igLl~S~~~Ig~~Igsl~~G~LaD----R~GR-RrvLlig~iL~aIgs 85 (706)
.++.+...+....++++ ..++.+.+|++...+|.+..+..+.-++..++.|.++| |+|| |+.++++.+..+++.
T Consensus 12 g~g~~~~~~~~~~~~~~l~~yyt~v~Gls~~~vg~i~~i~ri~dai~dp~~G~lsD~t~sr~Grrrp~il~g~i~~~i~~ 91 (473)
T PRK10429 12 GFGAFGKDFAIGIVYMYLMYYYTDVVGLSVGLVGTLFLVARIWDAINDPIMGWIVNNTRSRWGKFKPWILIGTLANSVVL 91 (473)
T ss_pred ccchhHHhHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhhchheeehhcCCCCCCCcchhHhhhhHHHHHHH
Confidence 34444444545555554 44566678999999999999999999999999999999 6698 556667888877776
Q ss_pred HHHHhhh------hHHHHHHHHHHHHHHHHhHHHHHHHHHHhcC-CcchhhHHhHHHHHHHHHHHHHHHHHHHHH-H-Hh
Q 005249 86 LVMLWSP------NVYVLCIARLLDGFGVGLAVTLVPLYISETA-PSEIRGRLNTLPQFTGSGGMFLAYCMVFGM-S-LL 156 (706)
Q Consensus 86 ll~a~a~------s~~lLli~R~L~GIg~G~~~~~~~a~IsE~f-P~k~Rg~a~Gi~~ag~~LG~alg~ll~~~l-~-l~ 156 (706)
+++...+ .+..+++..++.+++.....++..+++.|.. ++++|.+..++-..+.++|.++.+...... . ..
T Consensus 92 ~llf~~p~~~~~~~~~~~~~~~~l~~~~~t~~~ip~~al~~~lt~~~~eR~~l~~~~~~~~~ig~~~~~~~~~~~~~~~g 171 (473)
T PRK10429 92 FLLFSAHLFEGTAQYVFVCVTYILWGMTYTIMDIPFWSLVPTLTLDKREREQLVPYPRFFASLAGFVTAGFTLPFVNYVG 171 (473)
T ss_pred HHHHcCCCCCccHHHHHHHHHHHHHHHHHHHHcchHHhhhHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 6554432 1344555667778888888888899999998 589999999987777777755553332211 1 11
Q ss_pred ---ccchhhHHHHHHHHHHHHHHHHHHhhccCC
Q 005249 157 ---ASPSWRLMLGVLSIPALLYFAFAVFFLPES 186 (706)
Q Consensus 157 ---~~~GWR~~FlI~ail~LV~~ll~~lflpEs 186 (706)
...+|+...++.+++.++..++.++..+|.
T Consensus 172 ~~~~~~g~~~~~~i~~~~~~~~~~~~~~~~~e~ 204 (473)
T PRK10429 172 GGDRGFGFQMFTLVLIAFFIVSTIITLRNVHEV 204 (473)
T ss_pred CCchhhhHHHHHHHHHHHHHHHHHHHHcCceec
Confidence 123677777777776666555555545553
No 101
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=99.70 E-value=4.1e-14 Score=152.61 Aligned_cols=172 Identities=21% Similarity=0.299 Sum_probs=148.3
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhCChHHHHHHHHHHHH
Q 005249 4 AALVAIAATIGNFLQGWDNATIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFV 83 (706)
Q Consensus 4 ~~liliil~L~~fl~gl~~~iis~~lp~I~q~fGLS~s~igLl~S~~~Ig~~Igsl~~G~LaDR~GRRrvLlig~iL~aI 83 (706)
.++.+..+.+..+..--.....+|.++.+.+++|+|.+..|+++++..+...+.+++..+++.|+|.++.+..++++..+
T Consensus 10 ~~~li~gIvlia~NLR~~itsvgPLL~~Ir~~~gls~s~aGlLTtLPll~fg~~ap~a~~Lar~~g~er~l~~~Llli~~ 89 (395)
T COG2807 10 PLLLLAGIVLIAFNLRPAITSVGPLLDEIRQDLGLSFSVAGLLTTLPLLAFGLFAPAAPRLARRFGEERSLFLALLLIAA 89 (395)
T ss_pred chHHHHHHHHHHhccchhhhhhhhhHHHHHHHhcccHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhHHHHHHHHHHHHH
Confidence 34444444555555556667788999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhhHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCcchhhHHhHHHHHHHHHHHHHHHHHHHHHHHhccchhhH
Q 005249 84 SGLVMLWSPNVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSWRL 163 (706)
Q Consensus 84 gsll~a~a~s~~lLli~R~L~GIg~G~~~~~~~a~IsE~fP~k~Rg~a~Gi~~ag~~LG~alg~ll~~~l~l~~~~GWR~ 163 (706)
+.++-... +...++.+-.+.|.+.+...+..+.++-+.||++ -+..+|++.+..++|.++++.......... .+||.
T Consensus 90 G~~iR~~~-~~~~L~~gt~l~G~gIav~nVLLPslIK~~Fpk~-~~~mtglYs~sl~~~aaLaa~lavpla~~~-~gW~~ 166 (395)
T COG2807 90 GILIRSLG-GLPLLFLGTLLAGAGIAVINVLLPSLIKRDFPKR-VGLMTGLYSTSLGAGAALAAALAVPLAQHS-GGWRG 166 (395)
T ss_pred HHHHHhcc-cHHHHHHHHHHHHhhHHHHHHhhhHHHHhhcccc-hhhHHhHHHHHHHHHHHHHhhhhhHHHHhh-ccHHH
Confidence 99998876 7888899999999999999999999999999965 799999999999999999966655543332 48999
Q ss_pred HHHHHHHHHHHHHHH
Q 005249 164 MLGVLSIPALLYFAF 178 (706)
Q Consensus 164 ~FlI~ail~LV~~ll 178 (706)
.+.+.+.++++.+++
T Consensus 167 aL~~WAl~allAl~~ 181 (395)
T COG2807 167 ALGFWALLALLALLI 181 (395)
T ss_pred HHHHHHHHHHHHHHH
Confidence 999999988886644
No 102
>PF13347 MFS_2: MFS/sugar transport protein
Probab=99.65 E-value=5.5e-14 Score=155.31 Aligned_cols=159 Identities=22% Similarity=0.316 Sum_probs=125.7
Q ss_pred HHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhh----hhCChHHH-HHHHHHHHHHHHHHHhh-h-------h
Q 005249 27 GAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISD----WLGRRPML-ILSSVLYFVSGLVMLWS-P-------N 93 (706)
Q Consensus 27 ~~lp~I~q~fGLS~s~igLl~S~~~Ig~~Igsl~~G~LaD----R~GRRrvL-lig~iL~aIgsll~a~a-~-------s 93 (706)
...+++.+.+|+++...|++..+..+.-++..++.|.++| |+||||.+ +++.++.+++.+++... + .
T Consensus 23 ~~~~f~~~~~gl~~~~~g~i~~~~~i~dai~dp~~G~~sDr~~tr~Grrrp~~l~g~i~~~~~~~llf~~~p~~~~~~~~ 102 (428)
T PF13347_consen 23 YLLYFYTDVLGLSPALAGLILLVGRIWDAITDPLIGYLSDRTRTRWGRRRPWILIGAILLALSFFLLFSPPPAGLSFTAK 102 (428)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHhhhhcCCcEEEEEeeecccccccceEeehhhHHHHHHHHHhhccccchhhhhhH
Confidence 4456778888999999999999999999999999999999 89977654 47888888888877765 4 2
Q ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHhcCC-cchhhHHhHHHHHHHHHHHHHHHHHHHHHH-Hhc---c-chhhHHHHH
Q 005249 94 VYVLCIARLLDGFGVGLAVTLVPLYISETAP-SEIRGRLNTLPQFTGSGGMFLAYCMVFGMS-LLA---S-PSWRLMLGV 167 (706)
Q Consensus 94 ~~lLli~R~L~GIg~G~~~~~~~a~IsE~fP-~k~Rg~a~Gi~~ag~~LG~alg~ll~~~l~-l~~---~-~GWR~~FlI 167 (706)
...+.+..++..++......+..++..|..+ +++|.+..+.-+.+..+|.++......... ... . .+|++...+
T Consensus 103 ~~~~~~~~~l~~~~~t~~~i~~~al~~~lt~~~~~R~~l~~~~~~~~~~g~~l~~~~~~~l~~~~g~~~~~~~~~~~~~v 182 (428)
T PF13347_consen 103 LVWLFVFYILFDIAYTFVQIPYNALIPELTPDPDERTRLSSWRMIFSMIGSLLASFLAPILVSWFGGGDTSNGYRWMALV 182 (428)
T ss_pred HHHHHHHHHHHHHhhhhccCchhhcCccccccHhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhhccCccchHHHHHHHH
Confidence 3345666777789999998889999999998 478999999999999998875544443322 111 1 279999999
Q ss_pred HHHHHHHHHHHHHhhccC
Q 005249 168 LSIPALLYFAFAVFFLPE 185 (706)
Q Consensus 168 ~ail~LV~~ll~~lflpE 185 (706)
.+++.++..++.++..+|
T Consensus 183 ~~iv~~v~~~i~~~~~ke 200 (428)
T PF13347_consen 183 LAIVGLVFFLITFFFVKE 200 (428)
T ss_pred HHHHHHHHhhhhhheeee
Confidence 999888877777777776
No 103
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.64 E-value=1.1e-14 Score=157.52 Aligned_cols=119 Identities=20% Similarity=0.137 Sum_probs=107.7
Q ss_pred cCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhCChHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhHHHHH
Q 005249 36 LNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVMLWSPNVYVLCIARLLDGFGVGLAVTLV 115 (706)
Q Consensus 36 fGLS~s~igLl~S~~~Ig~~Igsl~~G~LaDR~GRRrvLlig~iL~aIgsll~a~a~s~~lLli~R~L~GIg~G~~~~~~ 115 (706)
.+.+..-.|.+.+.|.+...+.++.+|.++||+|||+++.+|.+..++..++.+++.++..+++.|++.|+..|-. .+.
T Consensus 63 ~~~~~~yaGflGSsF~ilQ~~sS~~~G~~SD~yGRkpvll~c~~~va~s~ll~~~S~~F~afv~aR~l~Gi~kgnl-~v~ 141 (451)
T KOG2615|consen 63 DGASVFYAGFLGSSFSILQFISSPLWGCLSDRYGRKPVLLACLIGVALSYLLWALSRNFAAFVLARFLGGIFKGNL-SVI 141 (451)
T ss_pred ccccchhhhhHhhHHHHHHHHhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCch-HHH
Confidence 3445577899999999999999999999999999999999999999999999999999977777799999998877 567
Q ss_pred HHHHHhcCCcchhhHHhHHHHHHHHHHHHHHHHHHHHHHH
Q 005249 116 PLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSL 155 (706)
Q Consensus 116 ~a~IsE~fP~k~Rg~a~Gi~~ag~~LG~alg~ll~~~l~l 155 (706)
-++++|.+++|+|+++++.+.+.+++|..+||.+...+..
T Consensus 142 rAiisdV~sek~r~l~ms~v~~a~~lGfilGPmIGgyla~ 181 (451)
T KOG2615|consen 142 RAIISDVVSEKYRPLGMSLVGTAFGLGFILGPMIGGYLAQ 181 (451)
T ss_pred HHHHHhhcChhhccceeeeeehhhhcchhhcchhhhHHHh
Confidence 7999999999999999999999999999999877766544
No 104
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=99.64 E-value=5e-14 Score=158.73 Aligned_cols=174 Identities=18% Similarity=0.089 Sum_probs=124.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhC-----ChHHHHHHHHHHH
Q 005249 8 AIAATIGNFLQGWDNATIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLG-----RRPMLILSSVLYF 82 (706)
Q Consensus 8 liil~L~~fl~gl~~~iis~~lp~I~q~fGLS~s~igLl~S~~~Ig~~Igsl~~G~LaDR~G-----RRrvLlig~iL~a 82 (706)
..++...++..++.........+.+.+++|++.++++.+.++..+...+-.+ +|.++||++ ||+.++++.++.+
T Consensus 28 ~~~~~~~y~~qGl~~l~~~~~~~~l~~~lg~s~~~i~~~~sl~~lpw~~K~l-~g~l~D~~~i~G~rRr~~l~~~~~l~~ 106 (468)
T TIGR00788 28 LAIGLQVLFVKGIAGLMRLPLSPMLTDDLGLDGARYQRLVGLSSLGWALKPF-AGVMSDTFPLFGYTKRWYLVLSGLLGS 106 (468)
T ss_pred HHHHHHHHHHhhHHHHhhhhhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHhcCCCCccchHHHHHHHHHHH
Confidence 4455556777787733334455667778999999999999999999999766 999999998 7777777777663
Q ss_pred -HHHHHHHhhhhHHHHH-HHHHHHHHHHHhHHHHHHHHHHhcCCcchhhHHhHHHH---HHHHHHHHHHHHHHHHHHHhc
Q 005249 83 -VSGLVMLWSPNVYVLC-IARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQ---FTGSGGMFLAYCMVFGMSLLA 157 (706)
Q Consensus 83 -Igsll~a~a~s~~lLl-i~R~L~GIg~G~~~~~~~a~IsE~fP~k~Rg~a~Gi~~---ag~~LG~alg~ll~~~l~l~~ 157 (706)
++....+..++..... +..++.+++.+...++...++.|..+ +++....+... .+..+|.++++.+... ..+
T Consensus 107 ~~~~~~l~~~~~~~~~~~~~~~l~~~~~a~~dv~~da~~~e~~~-~~~~~~~~~~s~~~~~~~~G~~vg~~l~G~--l~~ 183 (468)
T TIGR00788 107 AILYGLLPGKVSSAKVAAAFIFLAALAKALYDVLVDSLYSERIR-ESPSAGPSLVSWMWGASATGGLISSLLGGP--LLD 183 (468)
T ss_pred HHHHHhcccccchHHHHHHHHHHHHHHHHHHHHhHHHHHhhhhh-cCCCcCCCeeeHHHHHHHHHHHHHHHHHHH--HHH
Confidence 4434444445544444 47899999999999999999999998 55544333333 3334788877555443 345
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHhhccCC
Q 005249 158 SPSWRLMLGVLSIPALLYFAFAVFFLPES 186 (706)
Q Consensus 158 ~~GWR~~FlI~ail~LV~~ll~~lflpEs 186 (706)
..+|+..|++.+++.++. ++..++++|.
T Consensus 184 ~~~~~~~f~~~a~l~ll~-~~~~~~~~E~ 211 (468)
T TIGR00788 184 KTLTRILFLITAALLLLQ-LFVSNLSKER 211 (468)
T ss_pred hcCcchHHHHHHHHHHHH-HHHHHhcccc
Confidence 568999999988887776 3445667775
No 105
>PRK09848 glucuronide transporter; Provisional
Probab=99.63 E-value=4.9e-13 Score=148.47 Aligned_cols=129 Identities=12% Similarity=0.148 Sum_probs=87.4
Q ss_pred HHHHHHHHHHHHHHH-HHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhh----CChHHH-HHHHHHHHHHHH
Q 005249 13 IGNFLQGWDNATIAG-AIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWL----GRRPML-ILSSVLYFVSGL 86 (706)
Q Consensus 13 L~~fl~gl~~~iis~-~lp~I~q~fGLS~s~igLl~S~~~Ig~~Igsl~~G~LaDR~----GRRrvL-lig~iL~aIgsl 86 (706)
++.+..........+ +.+++.+.+|++..++|++.++..+..++..++.|+++||. ||||.+ .++.+...+..+
T Consensus 15 ~g~~~~~~~~~~~~~~l~~y~~~~~gl~~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~~~~~Gr~~~~~~~~~~~~~~~~~ 94 (448)
T PRK09848 15 LGDVANNFAFAMGALFLLSYYTDVAGVGAAAAGTMLLLVRVFDAFADVFAGRVVDSVNTRWGKFRPFLLFGTAPLMIFSV 94 (448)
T ss_pred cchHHhHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhhhheeeeecCCCCCcCchHHHHHHHHHHHHHHH
Confidence 343344444444433 34567777899999999999999999999999999999996 777654 556555554444
Q ss_pred HH-Hhh----h--hHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCc-chhhHHhHHHHHHHHH
Q 005249 87 VM-LWS----P--NVYVLCIARLLDGFGVGLAVTLVPLYISETAPS-EIRGRLNTLPQFTGSG 141 (706)
Q Consensus 87 l~-a~a----~--s~~lLli~R~L~GIg~G~~~~~~~a~IsE~fP~-k~Rg~a~Gi~~ag~~L 141 (706)
+. ... + ..+.+++..++.+++.+...++..++..+..+. ++|.+..++-..+..+
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~r~~~~~~r~~~~~~ 157 (448)
T PRK09848 95 LVFWVPTDWSHSSKVVYAYLTYMGLGLCYSLVNIPYGSLATAMTQQPQSRARLGAARGIAASL 157 (448)
T ss_pred HHHhCcCCCCcchHHHHHHHHHHHHHHHHHHhcccHhhhhhhhcCCHHHHHHHHHHHHHHHHH
Confidence 43 221 1 223344456777888888887777777776654 6788877776655444
No 106
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=99.63 E-value=2e-12 Score=146.96 Aligned_cols=161 Identities=14% Similarity=0.113 Sum_probs=123.4
Q ss_pred HHHHHHHHHHHHHHHHHHHH-HHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhh-CChHHHHHHHHHHHHHHHHHH
Q 005249 12 TIGNFLQGWDNATIAGAIVY-IKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWL-GRRPMLILSSVLYFVSGLVML 89 (706)
Q Consensus 12 ~L~~fl~gl~~~iis~~lp~-I~q~fGLS~s~igLl~S~~~Ig~~Igsl~~G~LaDR~-GRRrvLlig~iL~aIgsll~a 89 (706)
+...+...+....+...+|. +.+++|++..+.+.+.+.+.+...++.+++|+++||+ ||||+++++.++.+++.++++
T Consensus 15 ~~~~~~e~fs~Yg~~~~L~~yL~~~lgls~~~a~~i~~~~~~~~~l~~ligG~LaDRilGrrr~iliG~il~~lg~lll~ 94 (493)
T PRK15462 15 VALQIWEYFSFYGMRALLILYLTNQLKYDDNHAYELFSAYCSLVYVTPILGGFLADKVLGNRMAVMLGALLMAIGHVVLG 94 (493)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcHHHHHHHHHHHHHHHHHHH
Confidence 33334444444444445554 5567899999999999999999999999999999999 999999999999999988776
Q ss_pred hhh-hHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCcc--hhhHHhHHHHHHHHHHHHHHHHHHHHHHHhccchhhHHHH
Q 005249 90 WSP-NVYVLCIARLLDGFGVGLAVTLVPLYISETAPSE--IRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSWRLMLG 166 (706)
Q Consensus 90 ~a~-s~~lLli~R~L~GIg~G~~~~~~~a~IsE~fP~k--~Rg~a~Gi~~ag~~LG~alg~ll~~~l~l~~~~GWR~~Fl 166 (706)
..+ +...++++..+.+++.|...+...++++|.+|++ +|..+.++.+.+.++|.++++.+.... ....||++.|.
T Consensus 95 ~~~~~~~~~~l~l~li~iG~G~~~~~~~alv~elfp~~~~~R~sgf~i~Y~~~nlG~~iap~l~g~L--~~~~Gw~~~F~ 172 (493)
T PRK15462 95 ASEIHPSFLYLSLAIIVCGYGLFKSNVSCLLGELYEPTDPRRDGGFSLMYAAGNVGSIIAPIACGYA--QEEYSWAMGFG 172 (493)
T ss_pred HhhcchhHHHHHHHHHHHhcccccccHHHHHHHHCCCCCccccceehHHHHHHHHHHHHHHHHHHHH--HhhhChHHHHH
Confidence 543 2233444455566677777777788999999975 699999999999999999996665443 45569999998
Q ss_pred HHHHHHHH
Q 005249 167 VLSIPALL 174 (706)
Q Consensus 167 I~ail~LV 174 (706)
+.++..++
T Consensus 173 iaaigm~l 180 (493)
T PRK15462 173 LAAVGMIA 180 (493)
T ss_pred HHHHHHHH
Confidence 87664444
No 107
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=99.63 E-value=2.9e-13 Score=150.07 Aligned_cols=126 Identities=12% Similarity=0.094 Sum_probs=93.2
Q ss_pred HHHHHhhhcchHHHHhHHHHHHHHHHHHHHHhhhhhhhhhHHHHHHHHHHHHHHHHhhcccccchhhhhcccCCcchhhh
Q 005249 550 AMKLMDVAGRRKLLLTTIPVLIVSLIILVISETLQLISPVLKAGISTACVIIYFCCFVAAYGPIPNILCAEIFPTKVRGI 629 (706)
Q Consensus 550 ~~~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~ 629 (706)
+.++++|+|.|+.++++..++.+=.++.++..... .....-++-..-+....-++. -|+++.+|++..++
T Consensus 279 ~p~li~rig~k~~Lllag~i~~iRi~~~~~~~~~~---------~i~~~klLH~~e~~l~lva~f-kYI~~~fd~rlsAt 348 (412)
T PF01306_consen 279 SPWLINRIGAKNLLLLAGVIMAIRIIGSGFATNPW---------VISLIKLLHALEFPLLLVAAF-KYITAHFDKRLSAT 348 (412)
T ss_dssp HHHHHHHH-HHHHHHHHHHHHHHHHHHHHT--SHH---------HHHHHHHHHHHHHHHHHHHHH-HHHHHHS-GGGHHH
T ss_pred HHHHHHhcChHhHHHHHHHHHHHHHHHHhhhcchH---------HHHHHHHHHHHHHHHHHHHHH-HHHHHhCCHhHHHH
Confidence 89999999999999999888888877776654433 222233333333322222222 47889999999999
Q ss_pred HHHHH-HHHHHHHHHHHHhHHHHHHHhhchhhHHHHHHHHHHHHHHHHHhcccCCCC
Q 005249 630 CIAIC-AMAYWICDIIVTYTLPVMLSSIGLAGAFGVYAVVCFISWVFVFLRVPETKG 685 (706)
Q Consensus 630 ~~~~~-~~~~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~et~~ 685 (706)
...+. +...+++.++.+.+.|.+.+.+|++.+|++++++.++..++..+.+++.+.
T Consensus 349 ~y~v~~~~~~~~~~~i~s~~~G~lyd~~G~~~tylimg~iv~~~~li~~f~l~~~~~ 405 (412)
T PF01306_consen 349 LYLVGFQFAKQIGIIILSPLAGYLYDRIGFQHTYLIMGLIVLPFTLISAFTLKKDKK 405 (412)
T ss_dssp HHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS--SSS
T ss_pred HHHHHHHHHHHHHHHHHhhhHHhhHhhcCcHHHHHHHHHHHHHHHHHheeeecCCCc
Confidence 99885 688999999999999999999999999999999999888888887776654
No 108
>PRK11462 putative transporter; Provisional
Probab=99.62 E-value=1.4e-12 Score=146.65 Aligned_cols=164 Identities=13% Similarity=0.161 Sum_probs=120.6
Q ss_pred HHHHHH-HHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhhh----hCChHH-HHHHHHHHHHHHHHHHhhhh--
Q 005249 22 NATIAG-AIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDW----LGRRPM-LILSSVLYFVSGLVMLWSPN-- 93 (706)
Q Consensus 22 ~~iis~-~lp~I~q~fGLS~s~igLl~S~~~Ig~~Igsl~~G~LaDR----~GRRrv-Llig~iL~aIgsll~a~a~s-- 93 (706)
...++. .+.++.+.+|+++..+|.+..+.-+.=++.-++.|.++|| +||||. ++++.+..+++.+++-..++
T Consensus 25 ~~~~~~~l~~fyt~~~Gl~~~~~g~i~~~~ri~Dai~Dp~~G~~~D~t~~r~Gr~rp~il~g~i~~~i~~~llf~~p~~s 104 (460)
T PRK11462 25 FDNVMLYMMFFYTDIFGIPAGFVGTMFLVARALDAISDPCMGLLADRTRSRWGKFRPWVLFGALPFGIVCVLAYSTPDLS 104 (460)
T ss_pred HHHHHHHHHHHHHHhhCCCHHHHHHHHHHHHHHHHHHhhhheehhccCCCCCCCcchhHhHHHHHHHHHHHHHHhCCCCC
Confidence 333343 4455777889999999999999999999999999999995 788755 55677777777766654442
Q ss_pred ----HHHHHHHHHHHHHHHHhHHHHHHHHHHhcCC-cchhhHHhHHHHHHHHHHHHHHHHHHHHHH-Hhc----cchhhH
Q 005249 94 ----VYVLCIARLLDGFGVGLAVTLVPLYISETAP-SEIRGRLNTLPQFTGSGGMFLAYCMVFGMS-LLA----SPSWRL 163 (706)
Q Consensus 94 ----~~lLli~R~L~GIg~G~~~~~~~a~IsE~fP-~k~Rg~a~Gi~~ag~~LG~alg~ll~~~l~-l~~----~~GWR~ 163 (706)
...+++.-++..++......+..++..|+.+ +++|++..++...+..+|.+++++...... ... ..+|+.
T Consensus 105 ~~~~~~y~~~~~~~~~~~~t~~~ipy~al~~~lt~d~~eRt~l~s~r~~~~~iG~~~~~~~~~plv~~~g~~~~~~g~~~ 184 (460)
T PRK11462 105 MNGKMIYAAITYTLLTLLYTVVNIPYCALGGVITNDPTQRISLQSWRFVLATAGGMLSTVLMMPLVNLIGGDNKPLGFQG 184 (460)
T ss_pred cchHHHHHHHHHHHHHHHHHHHhccHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHH
Confidence 3445566777788888888888999999988 688999999999999998877755543322 111 136888
Q ss_pred HHHHHHHHHHHHHHHHHhhccC
Q 005249 164 MLGVLSIPALLYFAFAVFFLPE 185 (706)
Q Consensus 164 ~FlI~ail~LV~~ll~~lflpE 185 (706)
...+.+++.++..++.+...+|
T Consensus 185 ~~~i~~ii~~i~~~i~~~~~kE 206 (460)
T PRK11462 185 GIAVLSVVAFMMLAFCFFTTKE 206 (460)
T ss_pred HHHHHHHHHHHHHHHHHhccee
Confidence 7777777766655554444444
No 109
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=99.61 E-value=8.2e-12 Score=141.57 Aligned_cols=148 Identities=17% Similarity=0.267 Sum_probs=112.6
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhhhhCChHHHH-HHHHHHHHHHHHHHhh-h-hHHHHHHHHHHHHHHHHhHHHHHHH
Q 005249 41 TVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLI-LSSVLYFVSGLVMLWS-P-NVYVLCIARLLDGFGVGLAVTLVPL 117 (706)
Q Consensus 41 s~igLl~S~~~Ig~~Igsl~~G~LaDR~GRRrvLl-ig~iL~aIgsll~a~a-~-s~~lLli~R~L~GIg~G~~~~~~~a 117 (706)
+..++..++..+..++..++.|.++|+-|+||.++ +..++..++++++.+. + +++...+.-++.-++.+.......+
T Consensus 70 s~~~~~~sis~l~~all~P~lGa~aD~~~~Rk~~l~~~~~~~~~~~~~l~~v~~~~~~~~~~l~iia~v~~~~~~vfyna 149 (477)
T PF11700_consen 70 SLWLYANSISGLLQALLAPFLGAIADYGGRRKRFLLIFTLLGVLATALLWFVSPGQWWLALVLFIIANVGYEASNVFYNA 149 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44567788889999999999999999999776655 5555555666666653 3 4555555566666788888889999
Q ss_pred HHHhcCCcchh--------------------------hHHhHHHHHHHHHHHHHHHHHHHHHHHhcc------chhhHHH
Q 005249 118 YISETAPSEIR--------------------------GRLNTLPQFTGSGGMFLAYCMVFGMSLLAS------PSWRLML 165 (706)
Q Consensus 118 ~IsE~fP~k~R--------------------------g~a~Gi~~ag~~LG~alg~ll~~~l~l~~~------~GWR~~F 165 (706)
++.+..+++.+ ++..+.-.....+|..+..++......... .+-|..+
T Consensus 150 ~LP~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vS~~G~a~Gy~G~~v~l~i~l~~~~~~~~~~~~~~~~r~~~ 229 (477)
T PF11700_consen 150 YLPDLARPEPRVRAAREPSANGNISDSEYEAVDSLTRGRVSGLGWALGYIGGLVALLISLLLVISPGSTASNTWAIRVAF 229 (477)
T ss_pred HhHhhcCCChhhhhhhhhhccCCCChhhhhhHHHhhhchhHHHHHHHHHHHHHHHHHHHHHHHHcCCCccccchhhhHHH
Confidence 99999999988 899999888888888887555554433222 2468889
Q ss_pred HHHHHHHHHHHHHHHhhccCCch
Q 005249 166 GVLSIPALLYFAFAVFFLPESPR 188 (706)
Q Consensus 166 lI~ail~LV~~ll~~lflpEsp~ 188 (706)
.+.++.-++..+..++++|+.|+
T Consensus 230 ~~~a~ww~vfsiP~~~~~~~~~~ 252 (477)
T PF11700_consen 230 LIVALWWLVFSIPLFLWLPDRPG 252 (477)
T ss_pred HHHHHHHHHHHHHHHHhCCCCCC
Confidence 99998888878888888998864
No 110
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.58 E-value=4.1e-13 Score=151.32 Aligned_cols=185 Identities=16% Similarity=0.138 Sum_probs=133.7
Q ss_pred HHHHHHHHHHHH-HHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhCChHHHHHHHHHHHHHHHH---HHhhhhHHHH
Q 005249 22 NATIAGAIVYIK-KDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLV---MLWSPNVYVL 97 (706)
Q Consensus 22 ~~iis~~lp~I~-q~fGLS~s~igLl~S~~~Ig~~Igsl~~G~LaDR~GRRrvLlig~iL~aIgsll---~a~a~s~~lL 97 (706)
...+...+|.+. +.+|++..+.+++.+...++..++.+++|+++||+|||++++++.++..++.+. ...+++...+
T Consensus 266 ~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 345 (490)
T PRK10642 266 YYMLLTYMPSYLSHNLHYSEDHGVLIIIAIMIGMLFVQPVMGLLSDRFGRRPFVILGSVALFVLAIPAFILINSNVIGLI 345 (490)
T ss_pred HHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHhCCCHHHH
Confidence 333444556554 578999888888888889999999999999999999999988877654433322 2234567778
Q ss_pred HHHHHHHHHHHHhHHHHHHHHHHhcCCcchhhHHhHHHHHHHHHHHHHHHHHHHHHHHhccchhhHHHHHHHHHHHHHHH
Q 005249 98 CIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSWRLMLGVLSIPALLYFA 177 (706)
Q Consensus 98 li~R~L~GIg~G~~~~~~~a~IsE~fP~k~Rg~a~Gi~~ag~~LG~alg~ll~~~l~l~~~~GWR~~FlI~ail~LV~~l 177 (706)
++++++.|++.+...+....++.|.+|++.|++++|+......++..+++....... ....+|+..+++..+++++.++
T Consensus 346 ~~~~~~~g~~~~~~~g~~~~~~~~~~p~~~Rg~~~g~~~~~~~~~g~~~p~i~g~l~-~~~~~~~~~~~~~~~~~~i~~~ 424 (490)
T PRK10642 346 FAGLLMLAVILNCFTGVMASTLPAMFPTHIRYSALAAAFNISVLVAGLTPTLAAWLV-ESTQNLMMPAYYLMVVAVIGLI 424 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCCccchHHHHHHHHHHHHHHHHHHHHHHHHH-HHhCCchHHHHHHHHHHHHHHH
Confidence 888999999888777778888999999999999999744444444445543332222 1223577777666666655444
Q ss_pred HHHhhccCCchhhhcc-----cchHHHHHHHHHhhc
Q 005249 178 FAVFFLPESPRWLVSK-----GKMLEAKQVLQRLRG 208 (706)
Q Consensus 178 l~~lflpEsp~~l~~k-----~~~~~~~~~~~~~~~ 208 (706)
..+++||+|+|+..+ ++.+|+++.+++++.
T Consensus 425 -~~~~~pes~~~~~~~~~~~~~~~~~a~~~l~~~~~ 459 (490)
T PRK10642 425 -TGVTMKETANRPLKGATPAASDIQEAKEILVEHYD 459 (490)
T ss_pred -HHHHhccccCCCCCCccccccchhhHHHHhhcccc
Confidence 456679999998865 888899999988873
No 111
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.58 E-value=1.4e-13 Score=151.94 Aligned_cols=185 Identities=16% Similarity=0.177 Sum_probs=150.3
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhCChHHHHHHHHHH
Q 005249 2 NGAALVAIAATIGNFLQGWDNATIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLY 81 (706)
Q Consensus 2 ~r~~liliil~L~~fl~gl~~~iis~~lp~I~q~fGLS~s~igLl~S~~~Ig~~Igsl~~G~LaDR~GRRrvLlig~iL~ 81 (706)
+|+|+++++.++..+.+++....+++...+....|| +....-|+.-+|.+.+....+++-|+.|++|-|..+.++.++.
T Consensus 41 ~rRW~vLl~~slL~~SN~~qWI~ya~i~n~~~~~Yg-s~~~~~wlsmIym~v~vp~gf~~mw~ldk~GLR~a~llgt~ln 119 (480)
T KOG2563|consen 41 PRRWVVLLAFSLLNFSNGMQWIQYAPINNYVNSFYG-SSSAADWLSMIYMVVSVPFGFAAMWILDKFGLRTALLLGTVLN 119 (480)
T ss_pred hhHhHHHHHHHHHHhcCcchheeehhHHHHHHHHhc-chHHHHHHHHHHHHHHHHHhhHHHHhhcccchHHHHHHHHHHH
Confidence 578999999999999999888888888888999999 7777889999999999999999999999999999999999999
Q ss_pred HHHHHHHHhh------hhHH--HHHHHHHHHHHHHHhHHHHHHHHHHhcCCcchhhHHhHHHHHHHHHHHHHHHHHHHHH
Q 005249 82 FVSGLVMLWS------PNVY--VLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGM 153 (706)
Q Consensus 82 aIgsll~a~a------~s~~--lLli~R~L~GIg~G~~~~~~~a~IsE~fP~k~Rg~a~Gi~~ag~~LG~alg~ll~~~l 153 (706)
.+|+.+-..+ +.++ ....+..+.+.++-...........-||++++|..+..+-..++.+|.+++.++...+
T Consensus 120 ~iGa~Ir~iss~p~v~~~f~~~l~~~Gq~iaa~Aq~Fim~lPskiA~~WF~~~qra~A~~~~v~~n~LGvavg~llppil 199 (480)
T KOG2563|consen 120 GIGAWIRLISSLPFVPPLFRRPLTHTGQSIAAAAQPFILGLPSKIAAVWFPPDQRAIATVLGVMGNPLGVAVGFLLPPIL 199 (480)
T ss_pred HHHHHHhhhccCccccccchhhhhHHhHHHHHHhhhHhhccccHHHHhhCCcchhhhhhhHHHhcchHHHHHHhhcccee
Confidence 9999988765 3455 6778889999988888777778899999999999999999999999999997777655
Q ss_pred HHhc----cchhhH--HHHHHHHHHHHHHHHHHhhccCCc
Q 005249 154 SLLA----SPSWRL--MLGVLSIPALLYFAFAVFFLPESP 187 (706)
Q Consensus 154 ~l~~----~~GWR~--~FlI~ail~LV~~ll~~lflpEsp 187 (706)
.... ...|-. +|+..+.++.+.+++..++.++.|
T Consensus 200 V~~~~~~~~~~~~~~~~f~~~~~l~~l~l~l~~~~~~~~P 239 (480)
T KOG2563|consen 200 VPSSKDSEDNSWLFFTLFLGVECLAALLLALVLFVFTKKP 239 (480)
T ss_pred cCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCC
Confidence 4333 335654 355444444444444444445544
No 112
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=99.49 E-value=7.1e-14 Score=146.11 Aligned_cols=148 Identities=14% Similarity=0.076 Sum_probs=124.4
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhhh-hCChHHHHHHHHHH
Q 005249 3 GAALVAIAATIGNFLQGWDNATIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDW-LGRRPMLILSSVLY 81 (706)
Q Consensus 3 r~~liliil~L~~fl~gl~~~iis~~lp~I~q~fGLS~s~igLl~S~~~Ig~~Igsl~~G~LaDR-~GRRrvLlig~iL~ 81 (706)
++.+.++++|+..|-.++....-+....+++.+.++..++..++.+.|.....+.++++|++.|| +|-|..-++-+++.
T Consensus 41 hr~m~lv~mc~lgfgsyfcyd~p~alq~~fk~d~ni~~akftLlYsvYSwPNvVlcffgGflidr~fgir~gtii~~~fv 120 (459)
T KOG4686|consen 41 HRFMALVFMCLLGFGSYFCYDAPGALQIDFKLDSNIEYAKFTLLYSVYSWPNVVLCFFGGFLIDRRFGIRLGTIILCIFV 120 (459)
T ss_pred hHHHHHHHHHHhcccceeecCCchhhhhhhhcccccceeeeeeeeeeccCCCEEEeeecceeehhhhhhhHHHHHHHHHH
Confidence 35566777777777777777766666777888889999999999999999999999999999996 68887766667777
Q ss_pred HHHHHHHHh---hhhHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCcchhhHHhHHHHHHHHHHHHHHHHHH
Q 005249 82 FVSGLVMLW---SPNVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMV 150 (706)
Q Consensus 82 aIgsll~a~---a~s~~lLli~R~L~GIg~G~~~~~~~a~IsE~fP~k~Rg~a~Gi~~ag~~LG~alg~ll~ 150 (706)
.++.++++. .+.+|++..+||+.|+|.-..-++-.+|+.-||..|+.+.++|+..+...+|+.+-..+.
T Consensus 121 ~~GqliFa~Ggi~~aFw~M~~GRF~FGIGgESlAVaQN~yav~wFKGKELn~vfGlqlSvAR~GstvNf~lm 192 (459)
T KOG4686|consen 121 FLGQLIFAAGGISHAFWTMLAGRFLFGIGGESLAVAQNKYAVYWFKGKELNFVFGLQLSVARLGSTVNFLLM 192 (459)
T ss_pred HHHHHHHHhchHHHHHHHHHhhheeeccCchhhhhhhcceeEEEecCccccchhhHHHHHHHhhceeeeeec
Confidence 778777765 689999999999999998877777789999999999999999999999999987764433
No 113
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=99.47 E-value=7.2e-13 Score=119.68 Aligned_cols=137 Identities=30% Similarity=0.413 Sum_probs=119.9
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhCChHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCcc
Q 005249 47 VAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVMLWSPNVYVLCIARLLDGFGVGLAVTLVPLYISETAPSE 126 (706)
Q Consensus 47 ~S~~~Ig~~Igsl~~G~LaDR~GRRrvLlig~iL~aIgsll~a~a~s~~lLli~R~L~GIg~G~~~~~~~a~IsE~fP~k 126 (706)
.+.+.++..++.++.|++.||+|||+.+..+..+..++.++..+.++++.+.+.+++.|++.+...+....++.|.+|++
T Consensus 4 ~~~~~~~~~~~~~~~g~~~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 83 (141)
T TIGR00880 4 LAGYALGQLIYSPLSGLLTDRFGRKPVLLVGLFIFVLSTAMFALSSNITVLIIARFLQGFGAAFALVAGAALIADIYPPE 83 (141)
T ss_pred EEeehhHHHHHHhhHHHHHhhcchhHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhHHHHHHHHCChh
Confidence 44567888999999999999999999999999999999998888899999999999999999999999999999999999
Q ss_pred hhhHHhHHHHHHHHHHHHHHHHHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHhhccC
Q 005249 127 IRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSWRLMLGVLSIPALLYFAFAVFFLPE 185 (706)
Q Consensus 127 ~Rg~a~Gi~~ag~~LG~alg~ll~~~l~l~~~~GWR~~FlI~ail~LV~~ll~~lflpE 185 (706)
+|++++++.+....+|..+++...... .+..+|++.|++.+++.++..+..+++.||
T Consensus 84 ~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (141)
T TIGR00880 84 ERGVALGLMSAGIALGPLLGPPLGGVL--AQFLGWRAPFLFLAILALAAFILLAFLLPE 140 (141)
T ss_pred hhhHHHHHHHHhHHHHHHHhHHhHHHH--hcccchHHHHHHHHHHHHHHHHHHhhcCCC
Confidence 999999999999999999996555443 455689999999888887777666666665
No 114
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=99.46 E-value=1.1e-10 Score=131.28 Aligned_cols=174 Identities=16% Similarity=0.251 Sum_probs=132.1
Q ss_pred HHHHHHHHHHHHHHHHHH-HHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhhh----hCChHH-HHHHHHHHHHHHH
Q 005249 13 IGNFLQGWDNATIAGAIV-YIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDW----LGRRPM-LILSSVLYFVSGL 86 (706)
Q Consensus 13 L~~fl~gl~~~iis~~lp-~I~q~fGLS~s~igLl~S~~~Ig~~Igsl~~G~LaDR----~GRRrv-Llig~iL~aIgsl 86 (706)
++-+............+. ++...+|+++..+|.+..+.-+.=++.-++.|.+.|| +||+|. ++.+.+-.++.++
T Consensus 19 ~gd~~~~~~~~~~~~yLl~fYTdv~Gis~~~aG~iflv~RiiDAi~DP~~G~i~D~t~~r~GrfRP~lL~g~ip~~i~~~ 98 (467)
T COG2211 19 LGDFASNFAFGIVVLYLLFFYTDVFGLSAALAGTIFLVARIIDAITDPIMGFIVDRTRSRWGRFRPWLLWGAIPFAIVAV 98 (467)
T ss_pred chhhHHHHHHHHHHHHHHHHHhcccCCcHHHHHHHHHHHHHHHHHhcchheeeecccccccccccHHHHHHhHHHHHHHH
Confidence 333444444444444444 4666789999999999999999999999999999995 786655 5577788888888
Q ss_pred HHHhhh------hHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCC-cchhhHHhHHHHHHHHHHHHHHHHHHHHH-HHhc-
Q 005249 87 VMLWSP------NVYVLCIARLLDGFGVGLAVTLVPLYISETAP-SEIRGRLNTLPQFTGSGGMFLAYCMVFGM-SLLA- 157 (706)
Q Consensus 87 l~a~a~------s~~lLli~R~L~GIg~G~~~~~~~a~IsE~fP-~k~Rg~a~Gi~~ag~~LG~alg~ll~~~l-~l~~- 157 (706)
++-.++ +....++...+.+++......+..++..|+.+ +++|.+..+.-+.+..+|.++........ ....
T Consensus 99 l~F~~p~~~~~~k~~ya~vtY~l~~l~YT~vniPy~al~~~iT~d~~ER~~l~s~R~~~~~~g~~l~~~~~~plv~~~g~ 178 (467)
T COG2211 99 LLFITPDFSMTGKLIYALVTYMLLGLGYTLVNIPYGALGPEITQDPQERASLTSWRMVFASLGGLLVAVLFPPLVKLFGG 178 (467)
T ss_pred HHHcCCCcccCcchHHHHHHHHHHHHHHHheeCchhhcchhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 887766 34566677889999999998899999999976 58899999999999999977765444332 2221
Q ss_pred ---cchhhHHHHHHHHHHHHHHHHHHhhccCC
Q 005249 158 ---SPSWRLMLGVLSIPALLYFAFAVFFLPES 186 (706)
Q Consensus 158 ---~~GWR~~FlI~ail~LV~~ll~~lflpEs 186 (706)
..||+..-++.++++++..+++++-.+|.
T Consensus 179 ~~~~~g~~~~~~~~~vi~~i~~l~~~~~v~ER 210 (467)
T COG2211 179 GDKALGYQGTALVLGVIGVILLLFCFFNVKER 210 (467)
T ss_pred CcchhhHHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 34888888888888888777777776665
No 115
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.37 E-value=6.7e-11 Score=140.46 Aligned_cols=139 Identities=16% Similarity=0.017 Sum_probs=117.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhCChHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhHHHHHHHHHHhcC
Q 005249 44 GLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVMLWSPNVYVLCIARLLDGFGVGLAVTLVPLYISETA 123 (706)
Q Consensus 44 gLl~S~~~Ig~~Igsl~~G~LaDR~GRRrvLlig~iL~aIgsll~a~a~s~~lLli~R~L~GIg~G~~~~~~~a~IsE~f 123 (706)
.+...+..++.+++.+++|+++||+|||++++++.++.+++.++.+++++...+++++++.|++.++.++...++++|++
T Consensus 598 ~~~~~l~~l~~i~G~il~g~L~Dr~GRr~~l~~~~~lsai~~ll~~~~~s~~~ll~~~~l~g~~~~~~~~~~~a~~aEl~ 677 (742)
T TIGR01299 598 YFVNFLGTLAVLPGNIVSALLMDKIGRLRMLAGSMVLSCISCFFLSFGNSESAMIALLCLFGGLSIAAWNALDVLTVELY 677 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 34456677899999999999999999999999999999999999999888888888899999999989999999999999
Q ss_pred CcchhhHHhHHHHHHHHHHHHHHHHHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHhhccCC
Q 005249 124 PSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSWRLMLGVLSIPALLYFAFAVFFLPES 186 (706)
Q Consensus 124 P~k~Rg~a~Gi~~ag~~LG~alg~ll~~~l~l~~~~GWR~~FlI~ail~LV~~ll~~lflpEs 186 (706)
|.+.|++++|+..++..+|.++++.+...+.. .+...+|++.+++.++.+++ .+++||+
T Consensus 678 Pt~~Rgta~Gi~~~~~rlGaiigp~i~g~L~~---~~~~~pf~i~a~~lll~~ll-~~~LPET 736 (742)
T TIGR01299 678 PSDKRATAFGFLNALCKAAAVLGILIFGSFVG---ITKAAPILFASAALACGGLL-ALKLPDT 736 (742)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---hhhHHHHHHHHHHHHHHHHH-HHhCCCC
Confidence 99999999999999999999999766544322 13456777777777665544 4566887
No 116
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.36 E-value=6.6e-11 Score=131.24 Aligned_cols=160 Identities=12% Similarity=0.098 Sum_probs=131.8
Q ss_pred HHHHHHHHHcCCC--------hhHHHHHHHHHHHHHHHHHHHHHHHhhhhCChHHHHHHHHHHHHHHHHHHhhh----hH
Q 005249 27 GAIVYIKKDLNLG--------TTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVMLWSP----NV 94 (706)
Q Consensus 27 ~~lp~I~q~fGLS--------~s~igLl~S~~~Ig~~Igsl~~G~LaDR~GRRrvLlig~iL~aIgsll~a~a~----s~ 94 (706)
...+.+.++.|.+ .+..+.+.++..++.+++.++.|++.||+|+|+++.++.++.+++..+..... ++
T Consensus 229 ~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~~~i~~i~~~~~~g~l~dr~g~r~~l~~~~~~~~v~~~l~~~~~~~~~~~ 308 (418)
T TIGR00889 229 IFGNGFLHEFGRNPEFADSFVVKNASIWMSLSQFSEIFFILTIPFFLKRFGIKKVMLLSLVAWALRFGFFAYGDPEYFGY 308 (418)
T ss_pred HhHHHHHHHhcccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCcchhhH
Confidence 4445556666644 36779999999999999999999999999999999999999988877666632 34
Q ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHhcCCcchhhHHhHHHH-HHHHHHHHHHHHHHHHHHHhcc----chhhHHHHHHH
Q 005249 95 YVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQ-FTGSGGMFLAYCMVFGMSLLAS----PSWRLMLGVLS 169 (706)
Q Consensus 95 ~lLli~R~L~GIg~G~~~~~~~a~IsE~fP~k~Rg~a~Gi~~-ag~~LG~alg~ll~~~l~l~~~----~GWR~~FlI~a 169 (706)
+.+++.+++.|++.+...+....++.|++|+++|++++|+.+ +...+|.++|+.+......... .||+.+|.+.+
T Consensus 309 ~~l~l~~~l~g~~~~~~~~~~~~~i~~~~p~~~~g~~~g~~~~~~~~lg~~iGp~l~G~l~~~~g~~~~~~~~~~f~~~~ 388 (418)
T TIGR00889 309 ALLFLSMIVYGCAFDFFNISGSVFVEKEVPVHIRASAQGLFTLMCNGFGSLLGYILSGVMVEKMFAYGTFDWQTMWLFFA 388 (418)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccccCCchHHHHHHHH
Confidence 667778999999999988888999999999999999999997 6788999999777655443211 47999999999
Q ss_pred HHHHHHHHHHHhhccCC
Q 005249 170 IPALLYFAFAVFFLPES 186 (706)
Q Consensus 170 il~LV~~ll~~lflpEs 186 (706)
++.++.+++.+++++|+
T Consensus 389 ~~~~i~~~l~~~~~~~~ 405 (418)
T TIGR00889 389 GYIAILAVLFMIFFKYS 405 (418)
T ss_pred HHHHHHHHHHHHHhCCc
Confidence 98888888888888887
No 117
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.36 E-value=7.5e-11 Score=122.65 Aligned_cols=165 Identities=26% Similarity=0.333 Sum_probs=141.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHc-CCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhCChH-HHHHHHHHHHHHHHHHHh
Q 005249 13 IGNFLQGWDNATIAGAIVYIKKDL-NLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRP-MLILSSVLYFVSGLVMLW 90 (706)
Q Consensus 13 L~~fl~gl~~~iis~~lp~I~q~f-GLS~s~igLl~S~~~Ig~~Igsl~~G~LaDR~GRRr-vLlig~iL~aIgsll~a~ 90 (706)
+..+........+....|.+.++. +.+..+.+++.+...++..++.++.+++.||+|||+ .+..+.++..++.++...
T Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 261 (352)
T cd06174 182 LAFFLLSFGYYGLLTYLPLYLQEVLGLSAAEAGLLLSLFGLGGILGALLGGLLSDRLGRRRLLLLIGLLLAALGLLLLAL 261 (352)
T ss_pred HHHHHHHhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHH
Confidence 334444455555556666666654 999999999999999999999999999999999999 999999999999999999
Q ss_pred hhhHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCcchhhHHhHHHHHHHHHHHHHHHHHHHHHHHhccchhhHHHHHHHH
Q 005249 91 SPNVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSWRLMLGVLSI 170 (706)
Q Consensus 91 a~s~~lLli~R~L~GIg~G~~~~~~~a~IsE~fP~k~Rg~a~Gi~~ag~~LG~alg~ll~~~l~l~~~~GWR~~FlI~ai 170 (706)
.++.+.+++..++.|++.+...+...+++.|.+|+++|++.+++.+....+|..+++...... .+..+|+..|++.++
T Consensus 262 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~g~l--~~~~~~~~~~~~~~~ 339 (352)
T cd06174 262 APSLALLLVALLLLGFGLGFAFPALLTLASELAPPEARGTASGLFNTFGSLGGALGPLLAGLL--LDTGGYGGVFLILAA 339 (352)
T ss_pred hccHHHHHHHHHHHHHHHhccchhHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--hcccCcchHHHHHHH
Confidence 899999999999999999999999999999999999999999999999999999985554433 456799999999998
Q ss_pred HHHHHHHHH
Q 005249 171 PALLYFAFA 179 (706)
Q Consensus 171 l~LV~~ll~ 179 (706)
+.++..++.
T Consensus 340 ~~~i~~i~~ 348 (352)
T cd06174 340 LALLAALLL 348 (352)
T ss_pred HHHHHHHHh
Confidence 888766543
No 118
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.34 E-value=3.9e-11 Score=131.93 Aligned_cols=150 Identities=19% Similarity=0.196 Sum_probs=127.2
Q ss_pred HcCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhCChHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhHHHH
Q 005249 35 DLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVMLWSPNVYVLCIARLLDGFGVGLAVTL 114 (706)
Q Consensus 35 ~fGLS~s~igLl~S~~~Ig~~Igsl~~G~LaDR~GRRrvLlig~iL~aIgsll~a~a~s~~lLli~R~L~GIg~G~~~~~ 114 (706)
+.+.+..+.+++.++..++.+++.+++|++.||+|+|+.+.++.++.+++.++.+++++.+.+++++++.|++.+...+.
T Consensus 256 ~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~l~g~~~~~~~~~ 335 (420)
T PRK09528 256 TPEQGTRVFGYLNSFQVFLEALIMFFAPFIINRIGAKNALLLAGTIMAVRIIGSGFATGPLEVSILKLLHAFEVPFLLVG 335 (420)
T ss_pred ccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcchhhHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHH
Confidence 34677788999999999999999999999999999999999999999999888888999999999999999999888888
Q ss_pred HHHHHHhcCCcchhhHHhHH-HHHHHHHHHHHHHHHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHhhccCC
Q 005249 115 VPLYISETAPSEIRGRLNTL-PQFTGSGGMFLAYCMVFGMSLLASPSWRLMLGVLSIPALLYFAFAVFFLPES 186 (706)
Q Consensus 115 ~~a~IsE~fP~k~Rg~a~Gi-~~ag~~LG~alg~ll~~~l~l~~~~GWR~~FlI~ail~LV~~ll~~lflpEs 186 (706)
...++.+.+|++.|+...+. ++.+..+|.++++..... ..+..||+..|.+.+++.++..++.+++.++.
T Consensus 336 ~~~~~~~~~~~~~~a~~~~~~~~~~~~lg~~ig~~~~G~--l~~~~G~~~~f~~~~~~~~i~~~~~~~~~~~~ 406 (420)
T PRK09528 336 VFKYITLNFDVRLSATIYLVGFQFAKQLGAVFLSTLAGN--LYDSIGFQGTYLILGGIVLLFTLISVFTLSGD 406 (420)
T ss_pred HHHHHHHHcCccceeeeeeehHHHHHHHHHHHHHHHHHH--HHHhhCchHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 88999999999999887655 567788999898655433 34556899999998888877776666666655
No 119
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.33 E-value=5.3e-11 Score=125.49 Aligned_cols=148 Identities=18% Similarity=0.096 Sum_probs=123.4
Q ss_pred HHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhCChHHHHHHHHHHHHHHHHHHhhhhH--HHHHHHHHH
Q 005249 26 AGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVMLWSPNV--YVLCIARLL 103 (706)
Q Consensus 26 s~~lp~I~q~fGLS~s~igLl~S~~~Ig~~Igsl~~G~LaDR~GRRrvLlig~iL~aIgsll~a~a~s~--~lLli~R~L 103 (706)
....+.+.++++.+..+.+++.+++.++..++.+++|++.||+|||+.+.++.++.+++.++..+.++. ..++++.++
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (377)
T TIGR00890 225 IGLYKPYGQSLGLSDGFLVLAVSISSIFNGGGRPFLGALSDKIGRQKTMSIVFGISAVGMAAMLFIPMLNDVLFLATVAL 304 (377)
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHcccchhHHHHHHHHH
Confidence 344555678899999999999999999999999999999999999999999999988888877776643 334456788
Q ss_pred HHHHHHhHHHHHHHHHHhcCCcchhhHHhHHHHHHHHHHHHHHHHHHHHHHHhccchhhHHHHHHHHHHHHH
Q 005249 104 DGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSWRLMLGVLSIPALLY 175 (706)
Q Consensus 104 ~GIg~G~~~~~~~a~IsE~fP~k~Rg~a~Gi~~ag~~LG~alg~ll~~~l~l~~~~GWR~~FlI~ail~LV~ 175 (706)
.|++.+...+....++.|.+|+++|+++.|+.+....+|.++++.+.... .+..||++.|++.+++.++.
T Consensus 305 ~g~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l--~~~~g~~~~f~~~~~~~~~~ 374 (377)
T TIGR00890 305 VFFTWGGTISLFPSLVSDIFGPANSAANYGFLYTAKAVAGIFGGLIASHA--LTEIGFEYTFIVTGAFALTS 374 (377)
T ss_pred HHHHhccchhccHHHHHHHhhhhhhhhHhHHHHHHHHHHHHHHHHHHHHH--HhhhchhhHHHHHHHHHHHh
Confidence 89888888888888999999999999999999999999999996555433 45568999998887776654
No 120
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=99.33 E-value=2.9e-10 Score=121.62 Aligned_cols=89 Identities=13% Similarity=-0.026 Sum_probs=74.7
Q ss_pred HhhhhHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCcchhhHHhHHHHHHHHHHHHHHHHHHHHHHHhc-----------
Q 005249 89 LWSPNVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLA----------- 157 (706)
Q Consensus 89 a~a~s~~lLli~R~L~GIg~G~~~~~~~a~IsE~fP~k~Rg~a~Gi~~ag~~LG~alg~ll~~~l~l~~----------- 157 (706)
+...+|..++++-++.|.|.+...+....++++..+++++++.+++.++++++|..++|++........
T Consensus 5 ~~~~~~~~~l~~~f~~g~G~~~lq~~~n~~v~~~~~~~~~~~~l~~~~~~~~~G~~~gP~i~~~~i~~~~~~~~~~~~~~ 84 (310)
T TIGR01272 5 ASQRYYVLFLGALFVLASGLTILQVAANPYVSILGPIETAASRLALTQAFNKLGTTVAPLFGGSLILSGAGDLSMQVATA 84 (310)
T ss_pred HHhhHHHHHHHHHHHHHhhHHHHHhhHHHHHHHHCCcchHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCCcchhhhhhhh
Confidence 345789999999999999999999999999999999999999999999999999999988776554221
Q ss_pred ---cchhhHHHHHHHHHHHHHHH
Q 005249 158 ---SPSWRLMLGVLSIPALLYFA 177 (706)
Q Consensus 158 ---~~GWR~~FlI~ail~LV~~l 177 (706)
...|+++|++.+++.++..+
T Consensus 85 ~~~~~~~~~~yl~ia~~~~~~~i 107 (310)
T TIGR01272 85 NAEAAKVHTPYLLLAGALAVLAI 107 (310)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHH
Confidence 14799999877766555443
No 121
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=99.31 E-value=1.1e-09 Score=120.82 Aligned_cols=148 Identities=15% Similarity=0.176 Sum_probs=112.4
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhhhhCChHHH-HHHHHHHHHHHHHHHhhhh--H-HHHHHHHHHHHHHHHhHHHHHH
Q 005249 41 TVEGLVVAMSLIGATAITTCSGPISDWLGRRPML-ILSSVLYFVSGLVMLWSPN--V-YVLCIARLLDGFGVGLAVTLVP 116 (706)
Q Consensus 41 s~igLl~S~~~Ig~~Igsl~~G~LaDR~GRRrvL-lig~iL~aIgsll~a~a~s--~-~lLli~R~L~GIg~G~~~~~~~ 116 (706)
+..+...++..+..++.+++.|.++|..|+||.. -....+..++.++..++++ + +..++...+..++.....+...
T Consensus 58 a~~gy~~aia~llia~LapiLG~iaD~~g~Rk~~~~~f~~i~i~~~~~L~~i~~~s~~~~~l~~~il~~i~~~~s~Vfyd 137 (438)
T COG2270 58 AYWGYASAIAGLLIALLAPILGTIADYPGPRKKFFGFFTAIGIISTFLLWFIPPGSYLLLLLLFLILASIGFEFSNVFYD 137 (438)
T ss_pred hHHHHHHHHHHHHHHHHHHHhhhhhccCCCcchHHHHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHhcchhheehh
Confidence 6677888899999999999999999999966554 4666666666666666554 4 4444557788888889999999
Q ss_pred HHHHhcCCcchhhHHhHHHHHHHHHHHHHHHHHHHHHHHh----------------ccchhhHHHHHHHHHHHHHHHHHH
Q 005249 117 LYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLL----------------ASPSWRLMLGVLSIPALLYFAFAV 180 (706)
Q Consensus 117 a~IsE~fP~k~Rg~a~Gi~~ag~~LG~alg~ll~~~l~l~----------------~~~GWR~~FlI~ail~LV~~ll~~ 180 (706)
+++.+..++++-++..++-.....+|+++.-+........ +...-|..+.+.++..++..+..+
T Consensus 138 s~L~~~~~k~~~~riS~lg~~~gylgs~i~li~~~~~~~~~~~~~~~~~l~~l~~~~~~~~ri~~~l~A~W~li~~iPm~ 217 (438)
T COG2270 138 SMLPRLTTKDNMGRISGLGWALGYLGSVILLIFVVLGFALGQQTGITIILLGLPPADGEDVRITGLLAALWWLLFALPMI 217 (438)
T ss_pred hHhhhhcCccccCcccccccccccccchHHHHHHHHHHhcccccceeEEeeccCccccccchhHHHHHHHHHHHHHhHHH
Confidence 9999999999999999888888888888764444333221 334578888888888888777777
Q ss_pred hhccCCch
Q 005249 181 FFLPESPR 188 (706)
Q Consensus 181 lflpEsp~ 188 (706)
+..++.++
T Consensus 218 ~~v~~~~~ 225 (438)
T COG2270 218 LNVHDAEK 225 (438)
T ss_pred hccccccc
Confidence 77877753
No 122
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.31 E-value=3e-10 Score=123.41 Aligned_cols=158 Identities=15% Similarity=0.139 Sum_probs=127.4
Q ss_pred HHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhCChHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHH
Q 005249 25 IAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVMLWSPNVYVLCIARLLD 104 (706)
Q Consensus 25 is~~lp~I~q~fGLS~s~igLl~S~~~Ig~~Igsl~~G~LaDR~GRRrvLlig~iL~aIgsll~a~a~s~~lLli~R~L~ 104 (706)
....++.+.++.|.+ ..++..+.+.++.+++.++.|++.||+|+|+.+..+.++.+++.++..+.++.+.+++..++.
T Consensus 235 ~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 312 (399)
T PRK05122 235 IATFITLYYAARGWD--GAALALTLFGVAFVGARLLFGNLINRLGGLRVAIVSLLVEILGLLLLWLAPSPWMALIGAALT 312 (399)
T ss_pred HHHHHHHHHHHcccc--cchHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHH
Confidence 334455555566663 456667888899999999999999999999999999888888888888888888888899999
Q ss_pred HHHHHhHHHHHHHHHHhcCCcchhhHHhHHHHHHHHHHHHHHHHHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHhhcc
Q 005249 105 GFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSWRLMLGVLSIPALLYFAFAVFFLP 184 (706)
Q Consensus 105 GIg~G~~~~~~~a~IsE~fP~k~Rg~a~Gi~~ag~~LG~alg~ll~~~l~l~~~~GWR~~FlI~ail~LV~~ll~~lflp 184 (706)
|++.+..++.....+.+.+|+++|++++++++....+|..+++.+.. ...+..||+..|++.+++.++.+++.+++.+
T Consensus 313 G~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g--~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 390 (399)
T PRK05122 313 GFGFSLVFPALGVEAVKRVPPQNRGAALGAYSVFLDLSLGITGPLAG--LVASWFGYPSIFLAAALAALLGLALTWLLYR 390 (399)
T ss_pred HHhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHcCHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 99999988888888889999999999999999999999988755443 3344568999999988888776666554444
Q ss_pred CC
Q 005249 185 ES 186 (706)
Q Consensus 185 Es 186 (706)
+.
T Consensus 391 ~~ 392 (399)
T PRK05122 391 RA 392 (399)
T ss_pred cc
Confidence 43
No 123
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=99.29 E-value=3.1e-10 Score=126.02 Aligned_cols=164 Identities=16% Similarity=0.102 Sum_probs=124.6
Q ss_pred HHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhCChHHHHHHHHHHHHHHHHHHhhh--h-H-HHHH
Q 005249 23 ATIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVMLWSP--N-V-YVLC 98 (706)
Q Consensus 23 ~iis~~lp~I~q~fGLS~s~igLl~S~~~Ig~~Igsl~~G~LaDR~GRRrvLlig~iL~aIgsll~a~a~--s-~-~lLl 98 (706)
.......|.+.+++|.+.....+......++.+++.+++++++||+|||++++.+.++.+++.++++... + . ...+
T Consensus 288 ~~~~~~~p~i~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~~~i~~~~~~~v~~~~l~~~~~~~~~~~~~~ 367 (479)
T PRK10077 288 NVVLYYAPEIFKTLGASTDIALLQTIIVGVINLTFTVLAIMTVDKFGRKPLQIIGALGMAIGMFSLGTAFYTQAPGIVAL 367 (479)
T ss_pred hHHHHHHHHHHHHcCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcChHHHHHhHHHHHHHHHHHHHHHhcCcccHHHH
Confidence 3344566888889999887777777788889999999999999999999999999999888887765432 1 1 1223
Q ss_pred HHHHHHHHHHHhH-HHHHHHHHHhcCCcchhhHHhHHHHHHHHHHHHHHHHHHHHHH----HhccchhhHHHHHHHHHHH
Q 005249 99 IARLLDGFGVGLA-VTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMS----LLASPSWRLMLGVLSIPAL 173 (706)
Q Consensus 99 i~R~L~GIg~G~~-~~~~~a~IsE~fP~k~Rg~a~Gi~~ag~~LG~alg~ll~~~l~----l~~~~GWR~~FlI~ail~L 173 (706)
.+.++.+++.+.. .+....+++|.+|+++|++++|+......+|.++++....... ..+..+|++.|++.+++++
T Consensus 368 ~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 447 (479)
T PRK10077 368 LSMLFYVAAFAMSWGPVCWVLLSEIFPNAIRGKALAIAVAAQWIANYFVSWTFPMMDKNSWLVAHFHNGFSYWIYGCMGV 447 (479)
T ss_pred HHHHHHHHHHhccccchhHHHhHhhCChhHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccchhhhccCccHHHHHHHHHH
Confidence 3444455555433 3567899999999999999999999999999988854443221 2245688889999888888
Q ss_pred HHHHHHHhhccCC
Q 005249 174 LYFAFAVFFLPES 186 (706)
Q Consensus 174 V~~ll~~lflpEs 186 (706)
+.+++.+++.||+
T Consensus 448 ~~~~~~~~~~~e~ 460 (479)
T PRK10077 448 LAALFMWKFVPET 460 (479)
T ss_pred HHHHHHHhccccC
Confidence 8777777778887
No 124
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.28 E-value=1.2e-10 Score=126.44 Aligned_cols=176 Identities=19% Similarity=0.093 Sum_probs=129.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhCChHHHHHHHHHHHHHHHHH
Q 005249 9 IAATIGNFLQGWDNATIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVM 88 (706)
Q Consensus 9 iil~L~~fl~gl~~~iis~~lp~I~q~fGLS~s~igLl~S~~~Ig~~Igsl~~G~LaDR~GRRrvLlig~iL~aIgsll~ 88 (706)
+..++..+........+....|.+.+++|++..+.++......++.+++.+++|+++||+|||+.+.++.++.+++.++.
T Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~ 366 (481)
T TIGR00879 287 LGVVLQWFQQFTGINAIMYYSPTIFENAGVSTDHAFLVSIIVGAVNFAFTFVAIFLVDRFGRRPLLLIGAAGMAICLFVL 366 (481)
T ss_pred HHHHHHHHHHHhCCeehHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHH
Confidence 33344444444434445566788889999999888999999999999999999999999999999999888888877766
Q ss_pred Hh-----hh------hHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCcchhhHHhHHHHHHHHHHHHHHHHHHHHHHHhc
Q 005249 89 LW-----SP------NVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLA 157 (706)
Q Consensus 89 a~-----a~------s~~lLli~R~L~GIg~G~~~~~~~a~IsE~fP~k~Rg~a~Gi~~ag~~LG~alg~ll~~~l~l~~ 157 (706)
++ .+ +...+....++.+.......+....++.|.+|+++|++++++.+....+|.++++.+.... ..
T Consensus 367 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~lg~~i~~~~~~~~--~~ 444 (481)
T TIGR00879 367 GILGASFVTGSSKSSGNVAIVFILLFIAFFAMGWGPVPWVIVSEIFPLSLRPKGISIAVAANWLANFIVGFLFPTM--LE 444 (481)
T ss_pred HHHhhcccCCcccchhHHHHHHHHHHHHHHHccccCeehhhhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HH
Confidence 62 11 2222222333322222223355667889999999999999999999999999986554433 34
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHhhccCC
Q 005249 158 SPSWRLMLGVLSIPALLYFAFAVFFLPES 186 (706)
Q Consensus 158 ~~GWR~~FlI~ail~LV~~ll~~lflpEs 186 (706)
..+|++.|++.++++++.+++.+++.||+
T Consensus 445 ~~~~~~~f~~~~~~~~~~~i~~~~~~~~~ 473 (481)
T TIGR00879 445 SIGVGGVFIFFGGLNVLGLIFVYFFLPET 473 (481)
T ss_pred hcCccceehhHHHHHHHHHHHHheecccC
Confidence 46899999999988888777777777876
No 125
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.27 E-value=3.8e-10 Score=126.33 Aligned_cols=170 Identities=15% Similarity=0.044 Sum_probs=120.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH-HHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhCChHHHHHHHHHHHHHHHH-
Q 005249 10 AATIGNFLQGWDNATIAGAIVY-IKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLV- 87 (706)
Q Consensus 10 il~L~~fl~gl~~~iis~~lp~-I~q~fGLS~s~igLl~S~~~Ig~~Igsl~~G~LaDR~GRRrvLlig~iL~aIgsll- 87 (706)
.+++..++.......+...+|. +.+++|++..+.++..+++.++..++.+++|+++||+|||+.++++..+..++..+
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~p~yl~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~g~r~~~~~~~~~~~~~~~~~ 341 (467)
T PRK09556 262 LLCFANIFLYIVRIGIDNWSPVYAFQELGFSKEDAINTFTLFEIGALVGSLLWGWLSDLANGRRALVACIALALIIFTLG 341 (467)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCchHHHHHHHHHHHHHHH
Confidence 3444444444444445556664 55679999999999999999999999999999999999998877655444443322
Q ss_pred -HHhhhhHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCcchhhHHhHHHHHHHHH-HHHHHHHHHHHHHH----------
Q 005249 88 -MLWSPNVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSG-GMFLAYCMVFGMSL---------- 155 (706)
Q Consensus 88 -~a~a~s~~lLli~R~L~GIg~G~~~~~~~a~IsE~fP~k~Rg~a~Gi~~ag~~L-G~alg~ll~~~l~l---------- 155 (706)
....++...+.+++++.|++..........+..|.+|++.||.+.|+.+....+ |.++++.+......
T Consensus 342 ~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~p~~~~g~a~gi~~~~g~l~g~~~~~~~~G~i~~~~~~g~~~~~ 421 (467)
T PRK09556 342 VYQHATSEYMYLASLFALGFLVFGPQLLIGVAAVGFVPKKAIGVANGIKGTFAYLFGDSFAKVGLGMIADPTKNGTPIFG 421 (467)
T ss_pred HHHhcCcHHHHHHHHHHHHHHHhhHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHHhHHHHhhhHHHHhccccccccccc
Confidence 223456666777888888755444444446777999999999999999988886 66777555444332
Q ss_pred hccchhhHHHHHHHHHHHHHHHHH
Q 005249 156 LASPSWRLMLGVLSIPALLYFAFA 179 (706)
Q Consensus 156 ~~~~GWR~~FlI~ail~LV~~ll~ 179 (706)
....+|+..|.+.++..++.+++.
T Consensus 422 ~~~~~~~~~f~~~~~~~~~~~~~~ 445 (467)
T PRK09556 422 YTLTGWAGTFAALDIAAIGCICLM 445 (467)
T ss_pred ccccChHHHHHHHHHHHHHHHHHH
Confidence 004579999988877777655443
No 126
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.27 E-value=4.8e-10 Score=121.90 Aligned_cols=158 Identities=16% Similarity=0.054 Sum_probs=127.2
Q ss_pred HHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhCChHHHHHHHHHHHHHHHHHHhhhhHHHHHHHH
Q 005249 22 NATIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVMLWSPNVYVLCIAR 101 (706)
Q Consensus 22 ~~iis~~lp~I~q~fGLS~s~igLl~S~~~Ig~~Igsl~~G~LaDR~GRRrvLlig~iL~aIgsll~a~a~s~~lLli~R 101 (706)
...+....|.+.++.|++..+.+++.+.+.++.+++.++.|++.||+|||+.+..+.+..+++.++..+.++.+.+.+..
T Consensus 236 ~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (406)
T PRK11551 236 LYFLLNWLPSLLVGQGLSRSQAGLVQIAFNIGGALGSLLIGALMDRLRPRRVVLLIYAGILASLAALAAAPSFAGMLLAG 315 (406)
T ss_pred HHHHHHHHHHHHHhCCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHH
Confidence 33444456788888999999999999999999999999999999999999999888777777777777777888888888
Q ss_pred HHHHHHHHhHHHHHHHHHHhcCCcchhhHHhHHHHHHHHHHHHHHHHHHHHHHHhccchhhHHHHHHHHHHHHHHHHHH
Q 005249 102 LLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSWRLMLGVLSIPALLYFAFAV 180 (706)
Q Consensus 102 ~L~GIg~G~~~~~~~a~IsE~fP~k~Rg~a~Gi~~ag~~LG~alg~ll~~~l~l~~~~GWR~~FlI~ail~LV~~ll~~ 180 (706)
++.|++.++..+...+++.|.+|+++|++++|+.+....+|.++++.+...... ...+|...+++.+...++.+++.+
T Consensus 316 ~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~-~~~~~~~~~~~~~~~~~~~~~~~~ 393 (406)
T PRK11551 316 FAAGLFVVGGQSVLYALAPLFYPTQVRGTGVGAAVAVGRLGSMAGPLLAGQLLA-LGRSTVGVIGASIPVILVAALAAL 393 (406)
T ss_pred HHHHHHHHhHHHHHHHHHHHHcchhhhhhhhhHHHHhhhHHHHHHhhhHhhhhc-cCCchHHHHHHHHHHHHHHHHHHH
Confidence 899998888888889999999999999999999999999999999666544432 223566666665555555444433
No 127
>PRK12382 putative transporter; Provisional
Probab=99.27 E-value=4.6e-10 Score=121.81 Aligned_cols=159 Identities=16% Similarity=0.099 Sum_probs=129.1
Q ss_pred HHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhCChHHHHHHHHHHHHHHHHHHhhhhHHHHHHHH
Q 005249 22 NATIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVMLWSPNVYVLCIAR 101 (706)
Q Consensus 22 ~~iis~~lp~I~q~fGLS~s~igLl~S~~~Ig~~Igsl~~G~LaDR~GRRrvLlig~iL~aIgsll~a~a~s~~lLli~R 101 (706)
...+....+.+.++.+.+. .++..+.+.++.+++.++.|++.||+|+|+.+.++.++.+++.++..+.++.+.++++.
T Consensus 232 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (392)
T PRK12382 232 FAVIGTFVSLYFASKGWAM--AGFTLTAFGGAFVLMRVLFGWMPDRFGGVKVAIVSLLVETVGLLLLWLAPTAWVALAGA 309 (392)
T ss_pred HhHHHHHHHHHHHhcCCch--hHHHHHHHHHHHHHHHHHHHHHHHhcCCCeehHHHHHHHHHHHHHHHHcccHHHHHHHH
Confidence 3334445555666677653 45666777888899999999999999999999999999989888888888888888899
Q ss_pred HHHHHHHHhHHHHHHHHHHhcCCcchhhHHhHHHHHHHHHHHHHHHHHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHh
Q 005249 102 LLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSWRLMLGVLSIPALLYFAFAVF 181 (706)
Q Consensus 102 ~L~GIg~G~~~~~~~a~IsE~fP~k~Rg~a~Gi~~ag~~LG~alg~ll~~~l~l~~~~GWR~~FlI~ail~LV~~ll~~l 181 (706)
++.|++.+...+...+.+.+.+|+++|+++.|+++....+|..+++..... ..+..||+..|.+.+++.++..++.++
T Consensus 310 ~l~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~--l~~~~g~~~~~~~~~~~~~~~~~~~~~ 387 (392)
T PRK12382 310 ALTGAGCSLIFPALGVEVVKRVPSQVRGTALGGYAAFQDIAYGVSGPLAGM--LATSFGYPSVFLAGAISAVLGIIVTIL 387 (392)
T ss_pred HHHHHHHHhHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHhCchHHHHHHHHHHHHHHHHHHh
Confidence 999999998888888899999999999999999999999999999655443 345568999999998888777666554
Q ss_pred hcc
Q 005249 182 FLP 184 (706)
Q Consensus 182 flp 184 (706)
+.+
T Consensus 388 ~~~ 390 (392)
T PRK12382 388 SFR 390 (392)
T ss_pred hcc
Confidence 443
No 128
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.27 E-value=6.6e-10 Score=121.45 Aligned_cols=155 Identities=15% Similarity=0.152 Sum_probs=122.8
Q ss_pred HHHH-HHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhCChHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHH
Q 005249 27 GAIV-YIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVMLWSPNVYVLCIARLLDG 105 (706)
Q Consensus 27 ~~lp-~I~q~fGLS~s~igLl~S~~~Ig~~Igsl~~G~LaDR~GRRrvLlig~iL~aIgsll~a~a~s~~lLli~R~L~G 105 (706)
...| ++.+++|++..+.+++.+...++.+++.+++|+++||+|||+.+..+.+...+......+.++.+.+++.+++.+
T Consensus 237 ~~~p~~l~~~~~~~~~~~g~~~~~~~~~~i~~~~~~G~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~ 316 (393)
T PRK15011 237 INMPLFIINELHLPEKLAGVMMGTAAGLEIPTMLIAGYFAKRLGKRFLMRVAAVAGVCFYAGMLMAHSPAILLGLQLLNA 316 (393)
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 3445 456779999999999888888888889999999999999999888777666665555556678888888899999
Q ss_pred HHHHhHHHHHHHHHHhcCCcchhhHHhHHHHHHHHHHHHHHHHHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHhhccC
Q 005249 106 FGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSWRLMLGVLSIPALLYFAFAVFFLPE 185 (706)
Q Consensus 106 Ig~G~~~~~~~a~IsE~fP~k~Rg~a~Gi~~ag~~LG~alg~ll~~~l~l~~~~GWR~~FlI~ail~LV~~ll~~lflpE 185 (706)
++.|...+....+..|.+|+ +|++++++++....+|.++++.+.... .+..||+..|++.+++.++.+++ .+++||
T Consensus 317 ~~~g~~~~~~~~~~~~~~p~-~~g~~~~~~~~~~~lg~~~g~~l~G~i--~~~~g~~~~~~~~~~~~~~~~~~-~~~~~~ 392 (393)
T PRK15011 317 IYIGILGGIGMLYFQDLMPG-QAGSATTLYTNTSRVGWIIAGSLAGIV--AEIWNYHAVFWFALVMIIATLFC-LLRIKD 392 (393)
T ss_pred HHHHHHHHHHHHHHHHhCCC-CcchHHHHHHHHHHHHHHHHHHHHHHH--HHHhhhHHHHHHHHHHHHHHHHH-HHhhcC
Confidence 98888877888889999986 599999999999999999996665443 34568999998877777665544 445554
No 129
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=99.24 E-value=3.4e-09 Score=119.02 Aligned_cols=151 Identities=19% Similarity=0.170 Sum_probs=125.5
Q ss_pred HHHHHHcC----CChhHHHHHHHHHHHHHHHHHHHHHHHhhhh-CChHHHHHHHHHHHHHHHHHHhhh--hHHHHHHHHH
Q 005249 30 VYIKKDLN----LGTTVEGLVVAMSLIGATAITTCSGPISDWL-GRRPMLILSSVLYFVSGLVMLWSP--NVYVLCIARL 102 (706)
Q Consensus 30 p~I~q~fG----LS~s~igLl~S~~~Ig~~Igsl~~G~LaDR~-GRRrvLlig~iL~aIgsll~a~a~--s~~lLli~R~ 102 (706)
-++..+++ +++++..-+.++|..-.-+..+++|+++||+ |+|+++++|.+++.+|.++.+.+. +...++++-.
T Consensus 46 ~Yl~~~~~~gLg~~~~~A~~l~~~y~slVY~t~i~GG~laDr~LG~~~tI~lGail~~iGh~~L~~~~~~~~~gl~i~L~ 125 (498)
T COG3104 46 LYLYYQLGDGLGFDETHATGLFSAYGSLVYLTPIIGGWLADRVLGTRRTIVLGAILMAIGHLVLAISSVSGPGGLYIGLA 125 (498)
T ss_pred HHHHHhccccCCcChHhhHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHhccccccccHHHHHHH
Confidence 45555666 9999998888888888888889999999996 999999999999999999999884 7888999999
Q ss_pred HHHHHHHhHHHHHHHHHHhcCCcch--hhHHhHHHHHHHHHHHHHHHHHHHHHHHhccchhhHHHHHHHHHHHHHHHHHH
Q 005249 103 LDGFGVGLAVTLVPLYISETAPSEI--RGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSWRLMLGVLSIPALLYFAFAV 180 (706)
Q Consensus 103 L~GIg~G~~~~~~~a~IsE~fP~k~--Rg~a~Gi~~ag~~LG~alg~ll~~~l~l~~~~GWR~~FlI~ail~LV~~ll~~ 180 (706)
+.++|.|..=+....++.|.+|+++ |-..++++..+.++|+++++++... ...+.||...|...++-.++.++. +
T Consensus 126 ~I~iG~Gl~K~NiS~llg~ly~~~DprrD~gFt~fY~~iNiGsl~~p~i~~~--~~~~~g~~~gF~~aavGm~~gl~~-f 202 (498)
T COG3104 126 LIIVGTGLFKPNISSLLGELYPKDDPRRDGGFTLFYMGINIGSLIAPIITGL--LAINYGWHVGFGLAAVGMIIGLVI-F 202 (498)
T ss_pred HHHhccccccccHHHHHHHhcCCCCcccCCCccEEEEEeehHHHHHHHHHHH--HHHhhCHHHHHHHHHHHHHHHHHH-H
Confidence 9999999999999999999999754 5568888999999999999655544 456779999998877766664443 3
Q ss_pred hhc
Q 005249 181 FFL 183 (706)
Q Consensus 181 lfl 183 (706)
++.
T Consensus 203 ~~~ 205 (498)
T COG3104 203 LLG 205 (498)
T ss_pred HHc
Confidence 443
No 130
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.22 E-value=6.5e-10 Score=120.36 Aligned_cols=161 Identities=18% Similarity=0.196 Sum_probs=128.2
Q ss_pred HHHHHHHHHHHHHcCCChh----HHHHHHHHHHHHHHHHHHHHHHHhhhhCChHHHHHHHHHHHHHHHHHHhhhhHHHHH
Q 005249 23 ATIAGAIVYIKKDLNLGTT----VEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVMLWSPNVYVLC 98 (706)
Q Consensus 23 ~iis~~lp~I~q~fGLS~s----~igLl~S~~~Ig~~Igsl~~G~LaDR~GRRrvLlig~iL~aIgsll~a~a~s~~lLl 98 (706)
..+.+..+.+..+.+.+.. ..+.+.+++.++..++.++.|++.||+|||+.+..+.++.+++.+...+.++.+.++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (408)
T PRK09874 236 GSIAPILTLYVRELAGNVSNIAFISGMIASVPGVAALLSAPRLGKLGDRIGPEKILITALIFSVLLLIPMSFVQTPLQLG 315 (408)
T ss_pred HHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHHHhccHHHHH
Confidence 3344555555555433332 345666777788889999999999999999999999888888888777778888888
Q ss_pred HHHHHHHHHHHhHHHHHHHHHHhcCCcchhhHHhHHHHHHHHHHHHHHHHHHHHHHHhccchhhHHHHHHHHHHHHHHHH
Q 005249 99 IARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSWRLMLGVLSIPALLYFAF 178 (706)
Q Consensus 99 i~R~L~GIg~G~~~~~~~a~IsE~fP~k~Rg~a~Gi~~ag~~LG~alg~ll~~~l~l~~~~GWR~~FlI~ail~LV~~ll 178 (706)
+.+++.|++.+...+...+++.+..|+++|++.+++++....+|.++++..... ..+..||+..|++.+++.++.+++
T Consensus 316 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~gp~~~G~--l~~~~g~~~~f~~~~~~~l~~~~~ 393 (408)
T PRK09874 316 ILRFLLGAADGALLPAVQTLLVYNSSNQIAGRIFSYNQSFRDIGNVTGPLMGAA--ISANYGFRAVFLVTAGVVLFNAVY 393 (408)
T ss_pred HHHHHHHhhhHhhHHHHHHHHHHhCCcccceeeehHHHHHHHHHHHhhHHHHHH--HHhhcchhHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999655433 345668999999999888887766
Q ss_pred HHhhccC
Q 005249 179 AVFFLPE 185 (706)
Q Consensus 179 ~~lflpE 185 (706)
.++..++
T Consensus 394 ~~~~~~~ 400 (408)
T PRK09874 394 SWNSLRR 400 (408)
T ss_pred HHHHHHH
Confidence 6554443
No 131
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.22 E-value=8.4e-10 Score=121.08 Aligned_cols=159 Identities=17% Similarity=0.140 Sum_probs=134.4
Q ss_pred HHHHHHHHHH-cCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhCChHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHH
Q 005249 26 AGAIVYIKKD-LNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVMLWSPNVYVLCIARLLD 104 (706)
Q Consensus 26 s~~lp~I~q~-fGLS~s~igLl~S~~~Ig~~Igsl~~G~LaDR~GRRrvLlig~iL~aIgsll~a~a~s~~lLli~R~L~ 104 (706)
....|.+.++ +|.+..+.+++.+...++..++.++.+++.||.++++++..+.++.+++.++..+.++.+.+.++.++.
T Consensus 243 ~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (417)
T PRK10489 243 RVLYPALADEVWQMGAAQIGLLYAAVPLGAALGALTSGWLAHSARPGLLMLLSTLGSFLAVGLFGLMPMWILAVLCLALF 322 (417)
T ss_pred HHhhHHHHHhccCCChhHhHHHHHHHHHHHHHHHHHHHHhhhccCcchHHHHHHHHHHHHHHHHHccchHHHHHHHHHHH
Confidence 3455666666 899999999999999999999999999999998888888888888888888888888888888889999
Q ss_pred HHHHHhHHHHHHHHHHhcCCcchhhHHhHHHHHHHHHHHHHHHHHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHhhcc
Q 005249 105 GFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSWRLMLGVLSIPALLYFAFAVFFLP 184 (706)
Q Consensus 105 GIg~G~~~~~~~a~IsE~fP~k~Rg~a~Gi~~ag~~LG~alg~ll~~~l~l~~~~GWR~~FlI~ail~LV~~ll~~lflp 184 (706)
|++.+...+...+++.+.+|++.|++++|++.....+|..+++.+.... .+..|++..+++.+++.++..++....++
T Consensus 323 g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~l~G~l--~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 400 (417)
T PRK10489 323 GYLSAISSLLQYTLLQTQTPDEMLGRINGLWTAQNVTGDAIGAALLGGL--GAMMTPVASASASGFGLLIIGVLLLLVLG 400 (417)
T ss_pred HHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHhhhHhHHHHHHHHH--HHHhchhhHHHHHHHHHHHHHHHHHHhcc
Confidence 9999888888889999999999999999999999999999996555443 45568888888888877776766667777
Q ss_pred CC
Q 005249 185 ES 186 (706)
Q Consensus 185 Es 186 (706)
+.
T Consensus 401 ~~ 402 (417)
T PRK10489 401 EL 402 (417)
T ss_pred cc
Confidence 66
No 132
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.21 E-value=2e-09 Score=114.73 Aligned_cols=150 Identities=16% Similarity=0.211 Sum_probs=121.6
Q ss_pred HHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhCChHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHh
Q 005249 31 YIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVMLWSPNVYVLCIARLLDGFGVGL 110 (706)
Q Consensus 31 ~I~q~fGLS~s~igLl~S~~~Ig~~Igsl~~G~LaDR~GRRrvLlig~iL~aIgsll~a~a~s~~lLli~R~L~GIg~G~ 110 (706)
++.+++|.+..+.+++.+...+...++.+++|++.||+|||+++.++.++..++.++..+.++.+.+++.+++.|++.+.
T Consensus 225 ~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~ 304 (375)
T TIGR00899 225 LIIHELGLPDKLAGLMMGTAAGLEIPFMLLAGYLIKRFGKRRLMLLAALAGVAFYTGLAADNSLWALLMLQLLNAIFIGI 304 (375)
T ss_pred HHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45578899999999988888778888899999999999999999888777666666666677888888889999999998
Q ss_pred HHHHHHHHHHhcCCcchhhHHhHHHHHHHHHHHHHHHHHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHhhcc
Q 005249 111 AVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSWRLMLGVLSIPALLYFAFAVFFLP 184 (706)
Q Consensus 111 ~~~~~~a~IsE~fP~k~Rg~a~Gi~~ag~~LG~alg~ll~~~l~l~~~~GWR~~FlI~ail~LV~~ll~~lflp 184 (706)
..+....++.|..|++ +++++++++....+|.++++...... .+..||+..|++.+++.++..++ .++++
T Consensus 305 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~g~~~~g~~--~~~~g~~~~~~~~~~~~~~~~~~-~~~~~ 374 (375)
T TIGR00899 305 LAGIGMLYFQDLMPGR-AGAATTLYTNTGRVGWIIAGSVGGIL--AERWSYHAVYWFAIVMLIVALFC-LLLIK 374 (375)
T ss_pred HHHHHHHHHHHhCcch-hhHHHHHHHHHHHHHHHHHHHHHHHH--HHhccchhHHHHHHHHHHHHHHH-Hheec
Confidence 8888889999999864 67999999999999999986555433 34568999998888877765544 34443
No 133
>PRK03545 putative arabinose transporter; Provisional
Probab=99.20 E-value=2.4e-09 Score=116.44 Aligned_cols=155 Identities=11% Similarity=0.033 Sum_probs=122.1
Q ss_pred HHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhCChHHHHHHHHHHHHHH-HHHHhhhhHHHHHHHHHHHHHH
Q 005249 29 IVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSG-LVMLWSPNVYVLCIARLLDGFG 107 (706)
Q Consensus 29 lp~I~q~fGLS~s~igLl~S~~~Ig~~Igsl~~G~LaDR~GRRrvLlig~iL~aIgs-ll~a~a~s~~lLli~R~L~GIg 107 (706)
.|++.+.+|.+..+.+++.+++.++..++.++.|++.||+|+|+++. +..+..++. ++....++.+.++++.++.|++
T Consensus 229 ~~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~-~~~~~~~~~~~l~~~~~~~~~~~~~~~l~g~~ 307 (390)
T PRK03545 229 EPFVQQVAGLSENFATLLLLLFGGAGIIGSVLFSRLGNRHPSGFLLI-AIALLLVCLLLLLPAANSEWHLSVLSIFWGIA 307 (390)
T ss_pred HHHHHHhcCCCccHHHHHHHHHHHHHHHHHHHHHHHhhccchhHHHH-HHHHHHHHHHHHHHHhchHHHHHHHHHHHHHH
Confidence 35566668999999999999999999999999999999999887544 444444443 3334567788888889999999
Q ss_pred HHhHHHHHHHHHHhcCCcchhhHHhHHHHHHHHHHHHHHHHHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHhhccCCc
Q 005249 108 VGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSWRLMLGVLSIPALLYFAFAVFFLPESP 187 (706)
Q Consensus 108 ~G~~~~~~~a~IsE~fP~k~Rg~a~Gi~~ag~~LG~alg~ll~~~l~l~~~~GWR~~FlI~ail~LV~~ll~~lflpEsp 187 (706)
.+...+....++.+..| ++|++++|++.....+|..+|+++. ....+..|++..|++.+++.++.+++.+.+.+..|
T Consensus 308 ~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~G~~~~--G~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 384 (390)
T PRK03545 308 IMCIGLAMQVKVLKLAP-DATDVAMALFSGIFNIGIGAGALLG--NQVSLHLGLSSIGYVGAALALAALVWSILIFRRFP 384 (390)
T ss_pred HhcchHHHHHHHHHhCC-CcHHHHHHHHHHHHHHHHHHHHHHH--HHHHhccChhHHHHHHHHHHHHHHHHHHHHccccc
Confidence 88777777788888877 5789999999999999999985554 33456779999999999888887777666665443
No 134
>PRK09952 shikimate transporter; Provisional
Probab=99.18 E-value=4.6e-09 Score=117.00 Aligned_cols=155 Identities=12% Similarity=0.119 Sum_probs=111.7
Q ss_pred HHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhCChHHHHHHHHHHHHHHHHHHh---h-hhHHHHHHHHHHHHH
Q 005249 31 YIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVMLW---S-PNVYVLCIARLLDGF 106 (706)
Q Consensus 31 ~I~q~fGLS~s~igLl~S~~~Ig~~Igsl~~G~LaDR~GRRrvLlig~iL~aIgsll~a~---a-~s~~lLli~R~L~GI 106 (706)
++.+++|++......+..+..+...++.+++|+++||+|||+++..+.++.+++.+.+.. . ++.+.++++.++.++
T Consensus 276 y~~~~~g~s~~~~~~~~~~~g~~~~i~~~~~g~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 355 (438)
T PRK09952 276 YSTQNLGLPRELFLNIGLLVGGLSCLTIPCFAWLADRFGRRRVYITGALIGTLSAFPFFMALEAQSIFWIVFFSIMLANI 355 (438)
T ss_pred HHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHH
Confidence 456678998877666666677777888999999999999999998887766655443332 1 234455556677788
Q ss_pred HHHhHHHHHHHHHHhcCCcchhhHHhHHHH-HHHHHHHHHHHHHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHhhccC
Q 005249 107 GVGLAVTLVPLYISETAPSEIRGRLNTLPQ-FTGSGGMFLAYCMVFGMSLLASPSWRLMLGVLSIPALLYFAFAVFFLPE 185 (706)
Q Consensus 107 g~G~~~~~~~a~IsE~fP~k~Rg~a~Gi~~-ag~~LG~alg~ll~~~l~l~~~~GWR~~FlI~ail~LV~~ll~~lflpE 185 (706)
+.+...+...+++.|.+|++.|+.+.++.. .+..+|..+++.+..........+|+..+.+.++..++.++. .+.++|
T Consensus 356 ~~~~~~~~~~~~~~e~~p~~~r~tg~g~~~~~~~~lgg~~~p~i~g~l~~~~~~~~~~~~~~~~~~~~i~~v~-~~~~~~ 434 (438)
T PRK09952 356 AHDMVVCVQQPMFTEMFGASYRYSGAGVGYQVASVVGGGFTPFIAAALVTYFGGSWHSVAIYLLAGCLISAMT-ALLMKD 434 (438)
T ss_pred HHHHHHHHHHHHHHHHCCcchhHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHH-HHHccc
Confidence 888888888999999999999999988854 445578878766554443323336888887777777765544 455666
Q ss_pred C
Q 005249 186 S 186 (706)
Q Consensus 186 s 186 (706)
+
T Consensus 435 ~ 435 (438)
T PRK09952 435 N 435 (438)
T ss_pred c
Confidence 5
No 135
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.16 E-value=4e-09 Score=114.85 Aligned_cols=154 Identities=12% Similarity=0.090 Sum_probs=129.1
Q ss_pred HHHHHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhCChHHHHHHHHHHHHHHHHHHhhhhHHHHH
Q 005249 19 GWDNATIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVMLWSPNVYVLC 98 (706)
Q Consensus 19 gl~~~iis~~lp~I~q~fGLS~s~igLl~S~~~Ig~~Igsl~~G~LaDR~GRRrvLlig~iL~aIgsll~a~a~s~~lLl 98 (706)
......+....|.+.+++|.+..+.|++.++..++.+++.++.+++.||+|+|+++.++.++.++..++.+++++.+.++
T Consensus 218 ~~~~~~~~~~~~~~l~~~g~s~~~~g~l~~~~~~~~i~~~~~~~~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 297 (382)
T TIGR00902 218 QGAHAAYYGFSAIYWQAAGISASATGLLWGIGVLAEIIIFAFSNKLFQNCSARDLLLISAIACVGRWAIIGAIEAFPLIF 297 (382)
T ss_pred HHHHHHHHHHHHHHHHHCCCCHhHHHHHHHHHHHHHHHHHHHhHHHHhhCCHHHHHHHHHHHHHHHHHHHHhHhhHHHHH
Confidence 33344444555666678999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhHHHHHHHHHHhcCCcchhhHHhHHHH-HHHHHHHHHHHHHHHHHHHhccchhhHHHHHHHHHHHHHH
Q 005249 99 IARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQ-FTGSGGMFLAYCMVFGMSLLASPSWRLMLGVLSIPALLYF 176 (706)
Q Consensus 99 i~R~L~GIg~G~~~~~~~a~IsE~fP~k~Rg~a~Gi~~-ag~~LG~alg~ll~~~l~l~~~~GWR~~FlI~ail~LV~~ 176 (706)
+.+++.|+..+...+....++.+. |+++|+++.++++ ...++|.++++...... .+..|+ ..|.+.++++++.+
T Consensus 298 ~~q~l~g~~~~~~~~~~~~~i~~~-~~~~~~~~q~~~~~~~~g~g~~~g~~~~G~l--~~~~g~-~~~~~~~~~~~~~~ 372 (382)
T TIGR00902 298 LLQILHCGTFAVCHLAAMRYIAAQ-PGSEIAKLQALYNALAMGGLIAIFTAFAGFI--YPTLGA-GTFVFMAIIAAAAF 372 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhC-CHhhHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHhccH-HHHHHHHHHHHHHH
Confidence 999999999999999999999998 9999999999986 56788999886665544 344575 56667777666544
No 136
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.15 E-value=4.9e-09 Score=113.87 Aligned_cols=147 Identities=14% Similarity=0.132 Sum_probs=118.7
Q ss_pred HHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhCChHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHH
Q 005249 25 IAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVMLWSPNVYVLCIARLLD 104 (706)
Q Consensus 25 is~~lp~I~q~fGLS~s~igLl~S~~~Ig~~Igsl~~G~LaDR~GRRrvLlig~iL~aIgsll~a~a~s~~lLli~R~L~ 104 (706)
....+|.+.++.|.+..+.+++.+...++.++++++.|++.||+|+|+++..+.++.+++.++.. . ......+.++.
T Consensus 219 ~~~~lp~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~--~-~~~~~~~~~l~ 295 (381)
T PRK03633 219 LYGLMPLYLNHQGMSDASIGFWMALLVSAGILGQWPIGRLADRFGRLLVLRVQVFVVILGSIAML--S-QAAMAPALFIL 295 (381)
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHcCcHHHHHHHHHHHHHHHHHHh--h-hHHHHHHHHHH
Confidence 33456777788899999999999999999999999999999999999999988888777665543 2 23344567788
Q ss_pred HHHHHhHHHHHHHHHHhcCCcchhhHHhHHHHHHHHHHHHHHHHHHHHHHHhccchhhHHHHHHHHHHHHHH
Q 005249 105 GFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSWRLMLGVLSIPALLYF 176 (706)
Q Consensus 105 GIg~G~~~~~~~a~IsE~fP~k~Rg~a~Gi~~ag~~LG~alg~ll~~~l~l~~~~GWR~~FlI~ail~LV~~ 176 (706)
|++.+...|...+++.|..|+++++.+.+.+..+.++|.++++.+... ..+..+|++.|++.+.+.++..
T Consensus 296 g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~igp~~~G~--l~~~~g~~~~f~~~~~~~l~~~ 365 (381)
T PRK03633 296 GAAGFTLYPVAMAWACEKVEHHELVAMNQALLLSYTVGSLLGPSFTAM--LMQNYSDNLLFIMIASVSFIYL 365 (381)
T ss_pred HHHHHhHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHhCccHHHHHHHHHHHHHH
Confidence 888778888999999999999888888888888899999999655544 3455689999988888776644
No 137
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.15 E-value=3.5e-09 Score=111.59 Aligned_cols=167 Identities=19% Similarity=0.168 Sum_probs=114.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH-HHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhCChH--HHH------HHHHHH
Q 005249 11 ATIGNFLQGWDNATIAGAIVYI-KKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRP--MLI------LSSVLY 81 (706)
Q Consensus 11 l~L~~fl~gl~~~iis~~lp~I-~q~fGLS~s~igLl~S~~~Ig~~Igsl~~G~LaDR~GRRr--vLl------ig~iL~ 81 (706)
.++..++.......+....|.+ .+.+|.+..+.+++.+...++..++.+++|++.||+|||+ ... ++.++.
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (399)
T TIGR00893 220 LALGQFLVNIGLGFFLTWFPTYLVQERGLSILEAGFMASLPGIVGFIGMILGGRLSDLLLRRGKSLVFARKTAIIAGLVL 299 (399)
T ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHHhcccHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHH
Confidence 3344444444445555555654 5668999999999999999999999999999999999996 111 111111
Q ss_pred HHHHHHHHhhhhHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCcchhhHHhHHHHHHHHHHHHHHHHHHHHHHHhccch-
Q 005249 82 FVSGLVMLWSPNVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPS- 160 (706)
Q Consensus 82 aIgsll~a~a~s~~lLli~R~L~GIg~G~~~~~~~a~IsE~fP~k~Rg~a~Gi~~ag~~LG~alg~ll~~~l~l~~~~G- 160 (706)
.+..+.....++.+..+...++.+.+.+ ..+...+++.|.+|+++|++++++.+....+|.++++.+.. ...+..+
T Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~i~g--~l~~~~g~ 376 (399)
T TIGR00893 300 SLLMFATNYVNIPYAALALVALGFFGLG-AGAIGWALISDNAPGNIAGLTGGLINSLGNLGGIVGPIVIG--AIAATTGS 376 (399)
T ss_pred HHHHHHhccchhHHHHHHHHHHHHhchh-hhhHHHHHHHhhcChhHHHHHHHHHHHHHHHhhhhhhHHhh--hhccCCCc
Confidence 1111122222344444444444444444 77888999999999999999999999999999999955443 3345556
Q ss_pred hhHHHHHHHHHHHHHHHHHH
Q 005249 161 WRLMLGVLSIPALLYFAFAV 180 (706)
Q Consensus 161 WR~~FlI~ail~LV~~ll~~ 180 (706)
|+..|++.+++.++..++.+
T Consensus 377 ~~~~~~~~~~~~~~~~~~~~ 396 (399)
T TIGR00893 377 FAGALMVVAALALIGALSYL 396 (399)
T ss_pred hhHHHHHHHHHHHHHHHHHH
Confidence 99999888887777665543
No 138
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.14 E-value=2e-09 Score=114.19 Aligned_cols=157 Identities=24% Similarity=0.199 Sum_probs=114.6
Q ss_pred HHHHHHHHHHHHHHHHHHH-HHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhCChHHHHHHHHHHHHHH--HHHHh-
Q 005249 15 NFLQGWDNATIAGAIVYIK-KDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSG--LVMLW- 90 (706)
Q Consensus 15 ~fl~gl~~~iis~~lp~I~-q~fGLS~s~igLl~S~~~Ig~~Igsl~~G~LaDR~GRRrvLlig~iL~aIgs--ll~a~- 90 (706)
.++.......+....|.+. +++|.+..+.+.+.+...++..++.+++|+++||+|||+.+.++..+..+.. ++..+
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~ 307 (394)
T TIGR00883 228 VIATTTTFYLITTYLPTYLTQTLGLSANSALLVLMLSLILFFITIPLSGALSDRIGRRPVLIIFTVLAALLAVPLLMALL 307 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3344444444455566555 6789999999999999999999999999999999999998875555444333 22222
Q ss_pred -hhhHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCcchhhHHhHH-HHHHHHHHHHHHHHHHHHHHHhccch-hhHHHHH
Q 005249 91 -SPNVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTL-PQFTGSGGMFLAYCMVFGMSLLASPS-WRLMLGV 167 (706)
Q Consensus 91 -a~s~~lLli~R~L~GIg~G~~~~~~~a~IsE~fP~k~Rg~a~Gi-~~ag~~LG~alg~ll~~~l~l~~~~G-WR~~FlI 167 (706)
.++.+.+++..++.|++.+...+...+++.|.+|+++|++++++ .+.+..+|..+++.+.... .+..| |+..++.
T Consensus 308 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~g~~~~p~~~g~l--~~~~g~~~~~~~~ 385 (394)
T TIGR00883 308 DSGSFTLFFFLVLGLALIGGMYTGPMGSFLPELFPTEVRYTGASLAYNLAGAIFGGFAPYIAAAL--VAMTGDWYAIGYY 385 (394)
T ss_pred cCCchHHHHHHHHHHHHHHHHHhhhHHHHHHHhCCccceeeEeeehhHhHHHHHhhHHHHHHHHH--HHHcCcchhHHHH
Confidence 24667777788999999999999999999999999999999998 4566677887875554333 33445 8777665
Q ss_pred HHHHHH
Q 005249 168 LSIPAL 173 (706)
Q Consensus 168 ~ail~L 173 (706)
.++.++
T Consensus 386 ~~~~~l 391 (394)
T TIGR00883 386 LAALAL 391 (394)
T ss_pred HHHHHH
Confidence 555443
No 139
>PRK03699 putative transporter; Provisional
Probab=99.13 E-value=3e-09 Score=116.14 Aligned_cols=163 Identities=15% Similarity=0.045 Sum_probs=127.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHH-HHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhCChHHHHHHHHHHHHHHHHHHhh
Q 005249 13 IGNFLQGWDNATIAGAIVYIK-KDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVMLWS 91 (706)
Q Consensus 13 L~~fl~gl~~~iis~~lp~I~-q~fGLS~s~igLl~S~~~Ig~~Igsl~~G~LaDR~GRRrvLlig~iL~aIgsll~a~a 91 (706)
++.++.......+....|.+. +.+|++..+.+++.+.+.++..++.++.|+++||+++|+++.....+..+..++....
T Consensus 212 ~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~ 291 (394)
T PRK03699 212 IAALLYILAQLTFISWVPEYAQKKFGMSLEDAGNLVSNFWMAYMVGMWIFSFIVRFFDLQRILTVLAGLALVLMYLFVNT 291 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCChHHhhHHHHHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHc
Confidence 333443344444455566655 6789999999999999999999999999999999999999988887777777777677
Q ss_pred hhHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCcchhhHHhHHHHHHHHHHHHHHHHHHHHHHHhccchhhHHHHHHHHH
Q 005249 92 PNVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSWRLMLGVLSIP 171 (706)
Q Consensus 92 ~s~~lLli~R~L~GIg~G~~~~~~~a~IsE~fP~k~Rg~a~Gi~~ag~~LG~alg~ll~~~l~l~~~~GWR~~FlI~ail 171 (706)
++.+.+.+..++.|++.+..++...++..+..|. .+++..+....+..+|.++++...... .+..||+..+++.+++
T Consensus 292 ~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~-~~~~~~g~~~~~~~~g~~i~p~~~G~l--~~~~g~~~~~~~~~~~ 368 (394)
T PRK03699 292 DDPSHLLYAILGLGFFSSAIYTTIITLGSQQTKV-ASPKLVNFILTCGTIGTMLTFVVTSPI--VAHFGLQAALLTANGL 368 (394)
T ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHHHHHHccC-CCHHHHHHHHHhhhHHHHHHHHHHHHH--HHHhCchhhhhhhHHH
Confidence 7777777788899998888888888888887764 467888888888899999996555433 4456899999888877
Q ss_pred HHHHHHH
Q 005249 172 ALLYFAF 178 (706)
Q Consensus 172 ~LV~~ll 178 (706)
.++..++
T Consensus 369 ~~~~~~~ 375 (394)
T PRK03699 369 YAVVFVM 375 (394)
T ss_pred HHHHHHH
Confidence 7776544
No 140
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.12 E-value=9e-09 Score=112.87 Aligned_cols=161 Identities=12% Similarity=0.054 Sum_probs=119.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhCChHHHH-HHHHHHHHHHHHHHh---
Q 005249 15 NFLQGWDNATIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLI-LSSVLYFVSGLVMLW--- 90 (706)
Q Consensus 15 ~fl~gl~~~iis~~lp~I~q~fGLS~s~igLl~S~~~Ig~~Igsl~~G~LaDR~GRRrvLl-ig~iL~aIgsll~a~--- 90 (706)
.++.......+....|.+.+++|++..+.+++.+...++..++.++.|+++||+|||+.+. .+.+..+++.+++.+
T Consensus 231 ~~~~~~~~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~l~~~~~~~~l~~~~~ 310 (402)
T TIGR00897 231 RIINTIGLFGFAVFLPMFVAELGFSTSEWLQIWGTFFFTNIVFNVIFGIVGDKLGWMNTVRWFGGVGCGIFTLALYYIPQ 310 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444444445556678888889999999999999999999999999999999999988764 333333343333322
Q ss_pred --hhhHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCcchhhHHhHHHHHHHHHHHHHHHHHHHHHHHhccchhhHHHHHH
Q 005249 91 --SPNVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSWRLMLGVL 168 (706)
Q Consensus 91 --a~s~~lLli~R~L~GIg~G~~~~~~~a~IsE~fP~k~Rg~a~Gi~~ag~~LG~alg~ll~~~l~l~~~~GWR~~FlI~ 168 (706)
.++++.++++.++.|++.+...+ ....+.+..| ++|++++|+.+....+|..+++.+... ..+..||+..|++.
T Consensus 311 ~~~~~~~~~~~~~~~~G~~~~~~~~-~~~~~~~~~~-~~~g~~~g~~~~~~~lg~~~gp~i~g~--l~~~~g~~~~~~~~ 386 (402)
T TIGR00897 311 HFGHSFAVALIIAIALGIFLAGYVP-LAAVFPTLAP-KHKGAAMSVLNLSAGLSAFLAPAIAVL--FIGFFGAIGVVWIF 386 (402)
T ss_pred ccCCcHHHHHHHHHHHHHHHHHHHH-HHHHHHhhCc-chhHHHHHHHHHHHHHHHHHHHHHHHH--HHhhcchHHHHHHH
Confidence 24667777888899998887644 4456677655 579999999999999999999655543 34556899999988
Q ss_pred HHHHHHHHHHH
Q 005249 169 SIPALLYFAFA 179 (706)
Q Consensus 169 ail~LV~~ll~ 179 (706)
+++.++..++.
T Consensus 387 a~~~~i~~~~~ 397 (402)
T TIGR00897 387 AALYVVSAFLT 397 (402)
T ss_pred HHHHHHHHHHH
Confidence 88777755543
No 141
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=99.12 E-value=3.8e-10 Score=127.31 Aligned_cols=184 Identities=21% Similarity=0.261 Sum_probs=144.8
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--cCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhCC-hHHHHHHHH
Q 005249 3 GAALVAIAATIGNFLQGWDNATIAGAIVYIKKD--LNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGR-RPMLILSSV 79 (706)
Q Consensus 3 r~~liliil~L~~fl~gl~~~iis~~lp~I~q~--fGLS~s~igLl~S~~~Ig~~Igsl~~G~LaDR~GR-RrvLlig~i 79 (706)
..|..+.++.+..++......++.+..-.+.++ .+.+.+-.|++.++..++.++++++.|+...|.+. |+.++.+.+
T Consensus 31 t~wrsi~l~~~~sfl~~v~~sI~~~s~wpYl~~lD~~A~~~ffG~viaa~slg~~i~~liF~~Ws~k~~~~k~Pli~s~i 110 (488)
T KOG2325|consen 31 TNWRSIYLALLNSFLVAVQFSIYLTSMWPYLQKLDPTATATFFGLVIAASSLGHAIFSLIFGIWSNKTGSVKKPLIVSFL 110 (488)
T ss_pred CchHhHHHHHHHHHHHhhhheEEEeecchhhhhcCCCCCcchhhHHHHHHHHHHHhcchhhcccccccCCcccCHHHHHH
Confidence 356667777777777777777766655445555 67777899999999999999999999999999996 888888999
Q ss_pred HHHHHHHHHH-h---hh-hHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCcchhhHHhHHHHHHHHHHHHHHHHHHHHHH
Q 005249 80 LYFVSGLVML-W---SP-NVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMS 154 (706)
Q Consensus 80 L~aIgsll~a-~---a~-s~~lLli~R~L~GIg~G~~~~~~~a~IsE~fP~k~Rg~a~Gi~~ag~~LG~alg~ll~~~l~ 154 (706)
+..++.++.. + .+ ..+.++++|++.|+|.|.. ...-+|+++....++|.++++....+..+|..+|+.....+.
T Consensus 111 i~~~g~llY~~l~~~~~~~~y~mL~~R~l~Gvg~~n~-a~lR~Y~a~~s~~~dR~rA~a~~~~~~vlg~ilGp~~q~~f~ 189 (488)
T KOG2325|consen 111 IAIIGNLLYLALAYVPNGVKYLMLVARILTGVGVGNF-AVLRAYIADASTVEDRPRAFAATSGGFVLGIILGPTIQLAFT 189 (488)
T ss_pred HHHHHHHHHHHHHhcccchHHHHHHHHHHcCcCcccH-HHHHHHHHhccCccchHHHHHHhhhHHHHHHHHhHHHHHHHh
Confidence 9999998883 3 23 6788899999999998876 566689999888889999999999999999999977766554
Q ss_pred Hhccch-----------hhHHHHHHHHHHHHHHHHHHhhccCCc
Q 005249 155 LLASPS-----------WRLMLGVLSIPALLYFAFAVFFLPESP 187 (706)
Q Consensus 155 l~~~~G-----------WR~~FlI~ail~LV~~ll~~lflpEsp 187 (706)
.....| +..+-++.+++.++.+++.+++++|.+
T Consensus 190 ~Lg~~G~~i~~~~~~n~YTap~w~m~i~~i~~~v~i~~~f~E~~ 233 (488)
T KOG2325|consen 190 PLGEKGFMILPGLIFNMYTAPAWLMAILWIIYIVIILFFFKEVY 233 (488)
T ss_pred hhcCCceEEcCcceEEecchHHHHHHHHHHHHHHHHHhheeecc
Confidence 332222 233556777778887777788888874
No 142
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.11 E-value=9.4e-09 Score=114.71 Aligned_cols=170 Identities=18% Similarity=0.081 Sum_probs=110.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHH-HcCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhh--CChHHH-HHHHHHHHHHHHH
Q 005249 12 TIGNFLQGWDNATIAGAIVYIKK-DLNLGTTVEGLVVAMSLIGATAITTCSGPISDWL--GRRPML-ILSSVLYFVSGLV 87 (706)
Q Consensus 12 ~L~~fl~gl~~~iis~~lp~I~q-~fGLS~s~igLl~S~~~Ig~~Igsl~~G~LaDR~--GRRrvL-lig~iL~aIgsll 87 (706)
++..++.......+...+|.+.+ +.|++..+.+++..++.++..++.+++|+++||+ +||+.. +....+..++.++
T Consensus 259 ~l~~~~~~~~~~~~~~~~P~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~G~l~dr~~~~r~~~~~~~~~~l~~~~~~~ 338 (452)
T PRK11273 259 AIANVFVYLLRYGILDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFFMTLVTIATIV 338 (452)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCcchHHHHHHHHHHHHHHH
Confidence 33333333333444556676555 5799999999999999999999999999999999 555433 2223333333333
Q ss_pred HHh--hhhHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCcchhhHHhHHHHHHHHHHHHH-HHHHHHHHHHhccchhhHH
Q 005249 88 MLW--SPNVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFL-AYCMVFGMSLLASPSWRLM 164 (706)
Q Consensus 88 ~a~--a~s~~lLli~R~L~GIg~G~~~~~~~a~IsE~fP~k~Rg~a~Gi~~ag~~LG~al-g~ll~~~l~l~~~~GWR~~ 164 (706)
..+ ..+.+.++++.++.|.+..........++.|.+|++.||+++|+.+....+|..+ ++.... ...+..||+..
T Consensus 339 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~g~~v~g--~l~~~~g~~~~ 416 (452)
T PRK11273 339 YWLNPAGNPTVDMACMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVG--YTVDFFGWDGG 416 (452)
T ss_pred HHHhcccChHHHHHHHHHHHHHHHhHHHHHHHHHHHHcChhhhhhHHHHHHHHHHHHHHHhhhhhHH--HHHHHhcchHH
Confidence 222 2344445555555565443333344457789999999999999998888887654 543332 33445689999
Q ss_pred HHHHHHHHHHHHHHHHhhc
Q 005249 165 LGVLSIPALLYFAFAVFFL 183 (706)
Q Consensus 165 FlI~ail~LV~~ll~~lfl 183 (706)
|++.++.+++.++....+.
T Consensus 417 f~~~~~~~~~~~~~~~~~~ 435 (452)
T PRK11273 417 FMVMIGGSILAVILLIVVM 435 (452)
T ss_pred HHHHHHHHHHHHHHHHHHh
Confidence 9888887777665554443
No 143
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.10 E-value=2.4e-09 Score=120.03 Aligned_cols=157 Identities=8% Similarity=-0.016 Sum_probs=122.1
Q ss_pred HHHHHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhh--CChHHHH--HHHHHHHHHHHHHHhhhhH
Q 005249 19 GWDNATIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWL--GRRPMLI--LSSVLYFVSGLVMLWSPNV 94 (706)
Q Consensus 19 gl~~~iis~~lp~I~q~fGLS~s~igLl~S~~~Ig~~Igsl~~G~LaDR~--GRRrvLl--ig~iL~aIgsll~a~a~s~ 94 (706)
..........+|.+.+++|++..+.+++.++..++.+++.+++|+++||. ++|+... ++.++.+++.+++.+.+++
T Consensus 254 ~~~~~~~~~~l~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~~ 333 (455)
T TIGR00892 254 FLGFFAPIIFLVPYAKDKGVDEYEAAFLLSIIGFVDIFARPSCGLIAGLKWIRPHVQYLFSFALLFNGLTHLLCALAGDY 333 (455)
T ss_pred HHHccchHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCHHHHHHHHHHHHHHHHHHHHHHHhchH
Confidence 33333334455666778999999999999999999999999999999984 3443333 3344445555666677889
Q ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHhcCCcchhhHHhHHHHHHHHHHHHHHHHHHHHHHHhccc-hhhHHHHHHHHHHH
Q 005249 95 YVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASP-SWRLMLGVLSIPAL 173 (706)
Q Consensus 95 ~lLli~R~L~GIg~G~~~~~~~a~IsE~fP~k~Rg~a~Gi~~ag~~LG~alg~ll~~~l~l~~~~-GWR~~FlI~ail~L 173 (706)
+.+++.+++.|++.+...+...+++.|.+|+++++++++++++...+|.++++.+.... .+.. +|+..|++.+++.+
T Consensus 334 ~~~~i~~~~~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~igp~i~G~l--~~~~g~~~~~f~~~~~~~l 411 (455)
T TIGR00892 334 TGLVIYCIFFGLSFGSVGALLFEVLMDLVGAQRFSSAVGLVTIVECCAVLIGPPLAGRL--VDATKNYKYIFYASGSIVV 411 (455)
T ss_pred HHHHHHHHHHHHHhchHHHHHHHHHHHHhhHHHHhhHHhHHHHHHHHHHHccccceeee--ehhcCCcchHHHHhhHHHH
Confidence 99999999999999999999999999999999999999999999999999996554333 3333 69999988888766
Q ss_pred HHHH
Q 005249 174 LYFA 177 (706)
Q Consensus 174 V~~l 177 (706)
+.++
T Consensus 412 i~~~ 415 (455)
T TIGR00892 412 SAGL 415 (455)
T ss_pred HHHH
Confidence 6443
No 144
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.10 E-value=3.7e-09 Score=118.20 Aligned_cols=147 Identities=20% Similarity=0.145 Sum_probs=110.9
Q ss_pred HHHHHHHH-HHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhCChHHHHHHHHHHHHHHHHHHhh--hhHHHHHHHHH
Q 005249 26 AGAIVYIK-KDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVMLWS--PNVYVLCIARL 102 (706)
Q Consensus 26 s~~lp~I~-q~fGLS~s~igLl~S~~~Ig~~Igsl~~G~LaDR~GRRrvLlig~iL~aIgsll~a~a--~s~~lLli~R~ 102 (706)
...+|.+. +++|++..+.+++.+.+.++.+++.+++|+++||+|||+++.++.++..++.++.... .+.+.+.+..+
T Consensus 295 ~~~lp~~l~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 374 (496)
T PRK03893 295 QALLPTYLKTDLGYDPHTVANVLFFSGFGAAVGCCVGGFLGDWLGTRKAYVCSLLISQLLIIPVFAIGGANVWVLGLLLF 374 (496)
T ss_pred HHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHhhccccHHHHHHHHHH
Confidence 34556665 5899999999999999999999999999999999999999988877766665544432 33444445555
Q ss_pred HHHHHHHhHHHHHHHHHHhcCCcchhhHHhHHHHHHHHHHHHHHHHHHHHHHHhccchhhHHHHHHHHHHHH
Q 005249 103 LDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSWRLMLGVLSIPALL 174 (706)
Q Consensus 103 L~GIg~G~~~~~~~a~IsE~fP~k~Rg~a~Gi~~ag~~LG~alg~ll~~~l~l~~~~GWR~~FlI~ail~LV 174 (706)
+.++...+..+....++.|.+|+++|++++++.+....+|..+++.+.. ...+..||+..+.+.+....+
T Consensus 375 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~lgp~l~g--~l~~~~g~~~~~~~~~~~~~~ 444 (496)
T PRK03893 375 FQQMLGQGISGLLPKLIGGYFDTEQRAAGLGFTYNVGALGGALAPILGA--LIAQRLDLGTALASLSFSLTF 444 (496)
T ss_pred HHHHHhcccchhhHHHHHhhCCHHHhhcccchhhhhhhHHHHHHHHHHH--HHhccCChHHHHHHHHHHHHH
Confidence 5554444445667788999999999999999999999999999865443 445567888887665544433
No 145
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.09 E-value=4.8e-09 Score=112.47 Aligned_cols=135 Identities=24% Similarity=0.226 Sum_probs=107.7
Q ss_pred HHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhCChHHHHHHHHHHHHHH-HHHHhhhhHHHHHHHHHHHHHHH
Q 005249 30 VYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSG-LVMLWSPNVYVLCIARLLDGFGV 108 (706)
Q Consensus 30 p~I~q~fGLS~s~igLl~S~~~Ig~~Igsl~~G~LaDR~GRRrvLlig~iL~aIgs-ll~a~a~s~~lLli~R~L~GIg~ 108 (706)
+++.+++|++..+.+++.+...++.+++.++.|++.||+|||+.+.++.++.++.. .+....++.+.+.++.++.|+..
T Consensus 263 ~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (405)
T TIGR00891 263 TYLKADLGLSPHTVANIVVFSNIGAIVGGCVFGFLGDWLGRRKAYVCSLLAGQLLIIPVFAIGANVAVLGLGLFFQQMLV 342 (405)
T ss_pred HHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchhhhHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHH
Confidence 34566789999999999999999999999999999999999999988777653333 23334556677777778888877
Q ss_pred HhHHHHHHHHHHhcCCcchhhHHhHHHHHHHHHHHHHHHHHHHHHHHhccch-hhHHHH
Q 005249 109 GLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPS-WRLMLG 166 (706)
Q Consensus 109 G~~~~~~~a~IsE~fP~k~Rg~a~Gi~~ag~~LG~alg~ll~~~l~l~~~~G-WR~~Fl 166 (706)
+...+....++.|.+|+++|++++|+.+....+|..+++.+.... .+..| |+..+.
T Consensus 343 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~g~~~~g~l--~~~~g~~~~~~~ 399 (405)
T TIGR00891 343 QGIWGILPKHLGEYFPTDQRAAGLGFTYQLGNLGGALAPIIGALL--AQRLDEYGTALA 399 (405)
T ss_pred ccchhhHHHHHhhhCCcchhHHHhhHHHHHHHHHHHHHHHHHHHH--HHhccccchhHH
Confidence 777788889999999999999999999999999999996655443 34445 665553
No 146
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=99.08 E-value=4e-09 Score=119.35 Aligned_cols=159 Identities=15% Similarity=0.157 Sum_probs=105.3
Q ss_pred HHHHHHHHHcCCChhHHH-----------H-HHHHHHHHHHHHHHHHHHHhhhhCChHHHHHHHHHHHHHHHHHHhhhh-
Q 005249 27 GAIVYIKKDLNLGTTVEG-----------L-VVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVMLWSPN- 93 (706)
Q Consensus 27 ~~lp~I~q~fGLS~s~ig-----------L-l~S~~~Ig~~Igsl~~G~LaDR~GRRrvLlig~iL~aIgsll~a~a~s- 93 (706)
...|.+.++.|++....+ . ...+..++..++.+++++++||+|||++++++.++.+++.++.++..+
T Consensus 309 ~~~p~i~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l~dr~gRR~~l~~~~~~~~~~~~~l~~~~~~ 388 (502)
T TIGR00887 309 LNQKVILSAIGYSPPAATNNAYEELYKTAVGNLIIALAGTVPGYWVTVFLVDIIGRKPIQLMGFFILTVLFFVLGFAYNH 388 (502)
T ss_pred cccHHHHHHHcCCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcchhHHHHHHHHHHHHHHHHHHHHHh
Confidence 346777788888653211 1 233344566678889999999999999999888887777666654321
Q ss_pred ---HHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCcchhhHHhHHHHHHHHHHHHHHHHHHHHHHHhc--------cchhh
Q 005249 94 ---VYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLA--------SPSWR 162 (706)
Q Consensus 94 ---~~lLli~R~L~GIg~G~~~~~~~a~IsE~fP~k~Rg~a~Gi~~ag~~LG~alg~ll~~~l~l~~--------~~GWR 162 (706)
...+...-++..++..+..+..+.+.+|.+|.+.|+++.|+.+....+|.++++.......... +.++.
T Consensus 389 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~p~~~R~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 468 (502)
T TIGR00887 389 LSTHGFLAIYVLAQFFANFGPNATTFIVPGEVFPTRYRSTAHGISAASGKAGAIIGQFGFLYLAQHGDPTKGYPTGIWMG 468 (502)
T ss_pred cchhHHHHHHHHHHHHHhcCCCchhhhhhhccCchhHHHHHHHHHHHHhhhHHHHHHHHhhhhhccccccccccccccch
Confidence 1111111111222222334566778899999999999999999999999999866554443211 23456
Q ss_pred HHHHHHHHHHHHHHHHHHhhccCC
Q 005249 163 LMLGVLSIPALLYFAFAVFFLPES 186 (706)
Q Consensus 163 ~~FlI~ail~LV~~ll~~lflpEs 186 (706)
..|++.++++++..++ ++++||+
T Consensus 469 ~~~~i~~~~~~~~~i~-~~~lpEt 491 (502)
T TIGR00887 469 HVLEIFALFMFLGILF-TLLIPET 491 (502)
T ss_pred HHHHHHHHHHHHHHHH-heEeccC
Confidence 6788888877776554 4678998
No 147
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.07 E-value=1.4e-08 Score=111.40 Aligned_cols=164 Identities=20% Similarity=0.209 Sum_probs=123.9
Q ss_pred HHHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhCChHHHHHHHHHHHHHHHHHHhhh-hHHHHHH
Q 005249 21 DNATIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVMLWSP-NVYVLCI 99 (706)
Q Consensus 21 ~~~iis~~lp~I~q~fGLS~s~igLl~S~~~Ig~~Igsl~~G~LaDR~GRRrvLlig~iL~aIgsll~a~a~-s~~lLli 99 (706)
.........|.+.+++|++..+.+.+.+++.++.+++.++.|++.||+|||+.+.++..+.+++.++....+ +...+
T Consensus 220 ~~~~~~~~lp~~l~~~g~s~~~ag~~~~~~~i~~i~g~~~~g~l~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~-- 297 (393)
T PRK09705 220 GYASLIAWLPAFYIEIGASAQYSGSLLALMTLGQAAGALLMPAMARHQDRRKLLMLALVLQLVGFCGFIWLPLQLPVL-- 297 (393)
T ss_pred HHHHHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHHccchHHHH--
Confidence 333444556666677999999999999999999999999999999999999999988888777766554333 22222
Q ss_pred HHHHHHHHHHhHHHHHHHHHHhcCC-cchhhHHhHHHHHHHHHHHHHHHHHHHHHHHhccchhhHHHHHHHHHHHHHHHH
Q 005249 100 ARLLDGFGVGLAVTLVPLYISETAP-SEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSWRLMLGVLSIPALLYFAF 178 (706)
Q Consensus 100 ~R~L~GIg~G~~~~~~~a~IsE~fP-~k~Rg~a~Gi~~ag~~LG~alg~ll~~~l~l~~~~GWR~~FlI~ail~LV~~ll 178 (706)
.-++.|++.+...+.......+.++ +++|+++.++.+....++..+++......... ..+|...|++.++.+++.+++
T Consensus 298 ~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~gp~~~G~l~~~-~g~~~~~~~~~~~~~~~~~~~ 376 (393)
T PRK09705 298 WAMVCGLGLGGAFPLCLLLALDHSVQPAIAGKLVAFMQGIGFIIAGLAPWFSGVLRSI-SGNYLMDWAFHALCVVGLMII 376 (393)
T ss_pred HHHHHHHhccchHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCCchHHHHHHHHHHHHHHHH
Confidence 2346688888887877777777775 67899999999999999999986655444322 225888888888877777777
Q ss_pred HHhhccCCc
Q 005249 179 AVFFLPESP 187 (706)
Q Consensus 179 ~~lflpEsp 187 (706)
..++.||++
T Consensus 377 ~~~~~~~~~ 385 (393)
T PRK09705 377 TLRFAPARF 385 (393)
T ss_pred HHHhccccc
Confidence 677778873
No 148
>TIGR00895 2A0115 benzoate transport.
Probab=99.07 E-value=1e-08 Score=109.30 Aligned_cols=138 Identities=15% Similarity=0.041 Sum_probs=110.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhCChHHHHHHHHHHHHHHHHHHhhh
Q 005249 13 IGNFLQGWDNATIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVMLWSP 92 (706)
Q Consensus 13 L~~fl~gl~~~iis~~lp~I~q~fGLS~s~igLl~S~~~Ig~~Igsl~~G~LaDR~GRRrvLlig~iL~aIgsll~a~a~ 92 (706)
+..++............|.+.+++|.+..+.+++.+...++..++.+++|++.||+|+|+.+....+...++.++.....
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 336 (398)
T TIGR00895 257 LLYFMLLVGVYFLTNWLPKLMVELGFSLSLAATGGALFNFGGVIGSIIFGWLADRLGPRVTALLLLLGAVFAVLVGSTLF 336 (398)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHhh
Confidence 33334444445555667888899999999999999999999999999999999999999555444443333333333356
Q ss_pred hHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCcchhhHHhHHHHHHHHHHHHHHHHHH
Q 005249 93 NVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMV 150 (706)
Q Consensus 93 s~~lLli~R~L~GIg~G~~~~~~~a~IsE~fP~k~Rg~a~Gi~~ag~~LG~alg~ll~ 150 (706)
+.+.++++.++.|++.+...+...+++.|.+|+++|++++|+......+|.++++.+.
T Consensus 337 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~ 394 (398)
T TIGR00895 337 SPTLLLLLGAIAGFFVNGGQSGLYALMALFYPTAIRATGVGWAIGIGRLGAIIGPILA 394 (398)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHhH
Confidence 7777888899999999999999999999999999999999999999999999986554
No 149
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.05 E-value=3.6e-09 Score=113.01 Aligned_cols=127 Identities=17% Similarity=0.190 Sum_probs=97.1
Q ss_pred HHHHHhhhcchHHHHhHHHHHHHHHHHHHHHhhhhhhhhhHHHHHHHHHHHHHHHHhhcccccchhhhhcccCCcchhhh
Q 005249 550 AMKLMDVAGRRKLLLTTIPVLIVSLIILVISETLQLISPVLKAGISTACVIIYFCCFVAAYGPIPNILCAEIFPTKVRGI 629 (706)
Q Consensus 550 ~~~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~ 629 (706)
.++++||+|||+.+..+..+.+++.+.+....... ...+..++...+ .....+....++.|.+|++.|++
T Consensus 60 ~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~l~g~~-~~~~~~~~~~~~~~~~~~~~~~~ 129 (385)
T TIGR00710 60 WGPLSDRYGRRPVLLLGLFIFALSSLGLALSNNIE---------TLLVLRFVQAFG-ASAGSVISQALVRDIYPGEELSR 129 (385)
T ss_pred hhhHHHhcCChHHHHHHHHHHHHHHHHHHHHccHH---------HHHHHHHHHHcc-hhHHHHHHHHHHHHhcCcHHHHH
Confidence 88999999999999998888777777665532211 121222222111 11233556678899999999999
Q ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHhhchhhHHHHHHHHHHHHHHHHHhcccCCCCC
Q 005249 630 CIAICAMAYWICDIIVTYTLPVMLSSIGLAGAFGVYAVVCFISWVFVFLRVPETKGM 686 (706)
Q Consensus 630 ~~~~~~~~~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~et~~~ 686 (706)
+.++.+....++.++++.+.+.+.+..||+..|++.++++++..++.++..||++..
T Consensus 130 ~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (385)
T TIGR00710 130 IYSILMPVLALAPAVAPLLGGYILVWLSWHAIFAFLSLAGILLSALIFFILPETLPY 186 (385)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHhCCCCCCC
Confidence 999999999999999999999999999999999999988888888877778887544
No 150
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.05 E-value=1.8e-08 Score=110.29 Aligned_cols=137 Identities=15% Similarity=0.090 Sum_probs=99.5
Q ss_pred HHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhCChHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHH
Q 005249 25 IAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVMLWSPNVYVLCIARLLD 104 (706)
Q Consensus 25 is~~lp~I~q~fGLS~s~igLl~S~~~Ig~~Igsl~~G~LaDR~GRRrvLlig~iL~aIgsll~a~a~s~~lLli~R~L~ 104 (706)
+...+|.+.++.|.+..+.+.+.++..++..++.+++|++.||+|||+.+..+.++.++..++....++.....+.-++.
T Consensus 250 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (426)
T PRK12307 250 IFGLLPTYLAGEGFDTGVVSNLMTAAAFGTVLGNIVWGLCADRIGLKKTFSIGLLMSFLFIFPLFRIPQDNYLLLGACLF 329 (426)
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHH
Confidence 34456777778899999999999999999999999999999999999999888877766655444333221122222333
Q ss_pred HHH--HHhHHHHHHHHHHhcCCcchhhHHhHHHHHHHHHHHHHHHHHHHHHHHhccchhhH
Q 005249 105 GFG--VGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSWRL 163 (706)
Q Consensus 105 GIg--~G~~~~~~~a~IsE~fP~k~Rg~a~Gi~~ag~~LG~alg~ll~~~l~l~~~~GWR~ 163 (706)
|++ ..+..+..+.++.|.+|++.|++++|+......+|..+++.+.... .+..|+..
T Consensus 330 ~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~~~~~gp~~~g~l--~~~~g~~~ 388 (426)
T PRK12307 330 GLMATNVGVGGLVPKFLYDYFPLEVRGLGTGLIYNLAATSGTFNSMAATWL--GITMGLGA 388 (426)
T ss_pred HHHHhcccHhHHHHHHHHHhCcHHHHhhhhhHHHHHHhHHHHHHHHHHHHH--HHcccHHH
Confidence 332 2233455667889999999999999999999999999986655443 34445443
No 151
>PRK15075 citrate-proton symporter; Provisional
Probab=99.04 E-value=2.5e-08 Score=110.58 Aligned_cols=133 Identities=20% Similarity=0.135 Sum_probs=93.4
Q ss_pred HHHHHHHHHHHHHHHHH-HcCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhCChHHHHHHHHHHHHHHH-HH---Hhhh
Q 005249 18 QGWDNATIAGAIVYIKK-DLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGL-VM---LWSP 92 (706)
Q Consensus 18 ~gl~~~iis~~lp~I~q-~fGLS~s~igLl~S~~~Ig~~Igsl~~G~LaDR~GRRrvLlig~iL~aIgsl-l~---a~a~ 92 (706)
.......+....|.+.+ .+|++..+.+++...+.++..++.+++|+++||+|||++++++.++..+..+ .. ...+
T Consensus 250 ~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (434)
T PRK15075 250 TTVSFYLITVYTPTFGKTVLHLSAADSLLVTLCVGVSNFIWLPIGGALSDRIGRRPVLIAFTVLAILTAYPALSWLVAAP 329 (434)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 33334445555676655 4899999999999999999999999999999999999998876554433221 11 1223
Q ss_pred hHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCcchhhHHhHHHHH-HHHHHHHHHHHHH
Q 005249 93 NVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQF-TGSGGMFLAYCMV 150 (706)
Q Consensus 93 s~~lLli~R~L~GIg~G~~~~~~~a~IsE~fP~k~Rg~a~Gi~~a-g~~LG~alg~ll~ 150 (706)
++..+.+..++.|++.+...+....++.|.+|++.|+.++++... +..++..+++...
T Consensus 330 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~e~~p~~~rg~~~g~~~~~~~~~~g~~~p~~~ 388 (434)
T PRK15075 330 SFARMLAVELWLSFLYGSYNGAMVVALTEVMPAEVRTAGFSLAYSLATAIFGGFTPAIS 388 (434)
T ss_pred chHHHHHHHHHHHHHHHHHHhhHHHHHHHHCCCCccchheeHHHHHHHHHHhhhHHHHH
Confidence 444444556666777777777777899999999999999998644 3334455564443
No 152
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.04 E-value=4.5e-09 Score=114.11 Aligned_cols=160 Identities=14% Similarity=0.154 Sum_probs=117.2
Q ss_pred HHHHHHHHHHHHhhhhhhhhHhcHHHHHHhhhh----------------------HHHHHhhhcchHHHHhHHHHHHHHH
Q 005249 517 ALLVGVGIQILQQFSGINGVLYYTPQILEQAGV----------------------AMKLMDVAGRRKLLLTTIPVLIVSL 574 (706)
Q Consensus 517 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~----------------------~~~l~d~~grr~~~~~~~~~~~~~~ 574 (706)
|.+.++....++...++.....+.|.+.++.|. .|+++||+|||+.++.+..+..++.
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~i~~ 82 (392)
T PRK10473 3 RFLLCSFALVLLYPAGIDMYLVGLPRIAADLNASEAQLHIAFSVYLAGMAAAMLFAGKIADRSGRKPVAIPGAALFIIAS 82 (392)
T ss_pred hHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHhHHHHHhCChHHHHHHHHHHHHHH
Confidence 344555566666666666667778888776553 8999999999999999887777777
Q ss_pred HHHHHHhhhhhhhhhHHHHHHHHHHHHHHHHhhcccccchhhhhcccCCcchhhhHHHHHHHHHHHHHHHHHhHHHHHHH
Q 005249 575 IILVISETLQLISPVLKAGISTACVIIYFCCFVAAYGPIPNILCAEIFPTKVRGICIAICAMAYWICDIIVTYTLPVMLS 654 (706)
Q Consensus 575 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~~~~i~~~~~~~~~~ 654 (706)
+.+....... ...+..++...+ .....+..+.++.|.+|++.|+++.++.+....++.+++|.+.+.+.+
T Consensus 83 ~~~~~~~~~~---------~~~~~~~l~g~~-~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~i~~~~~~~i~~~l~~ 152 (392)
T PRK10473 83 LLCSLAETSS---------LFLAGRFLQGIG-AGCCYVVAFAILRDTLDDRRRAKVLSLLNGITCIIPVLAPVLGHLIML 152 (392)
T ss_pred HHHHHhCcHH---------HHHHHHHHHHhh-hhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 6665432211 112222222211 112234566788999999999999999999999999999999998888
Q ss_pred hhchhhHHHHHHHHHHHHHHHHHhcccCCCCC
Q 005249 655 SIGLAGAFGVYAVVCFISWVFVFLRVPETKGM 686 (706)
Q Consensus 655 ~~g~~~~~~~~~~~~~~~~~~~~~~~~et~~~ 686 (706)
..||+..|.+.++++++..++.++.+||++..
T Consensus 153 ~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 184 (392)
T PRK10473 153 KFPWQSLFYTMAAMGILVLLLSLFILKETRPA 184 (392)
T ss_pred CcChHHHHHHHHHHHHHHHHHHHHHcCCCCCc
Confidence 89999999999998888888877778887543
No 153
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.03 E-value=1.3e-08 Score=113.09 Aligned_cols=169 Identities=20% Similarity=0.088 Sum_probs=112.3
Q ss_pred HHHHHHHHHHHHHHHHHHH-HHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhh--CChHHH-HH---HHHHHHHHHHH
Q 005249 15 NFLQGWDNATIAGAIVYIK-KDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWL--GRRPML-IL---SSVLYFVSGLV 87 (706)
Q Consensus 15 ~fl~gl~~~iis~~lp~I~-q~fGLS~s~igLl~S~~~Ig~~Igsl~~G~LaDR~--GRRrvL-li---g~iL~aIgsll 87 (706)
.++.......+...+|.+. +++|++..+.++..+.+.++..++.+++|+++||+ ++|+.. .. +.++..++.++
T Consensus 252 ~~~~~~~~~~~~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~~g~~~~g~l~dr~~~~~r~~~~~~~~~~~~~~~~~~~~ 331 (434)
T PRK11663 252 YVLVYVVRAAINDWGNLYMSETLGVDLVTANSAVSMFELGGFIGALVAGWGSDKLFNGNRGPMNLIFAAGILLSVGSLWL 331 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHHHhhhHHHhccCCccHHHHHHHHHHHHHHHHHHH
Confidence 3333444444445556555 67899999999999999999999999999999999 333332 22 11212111111
Q ss_pred HHhhhhHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCcchhhHHhHHHHHHHHHHHHHHHHHHHHHHHhccchhhHHHHH
Q 005249 88 MLWSPNVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSWRLMLGV 167 (706)
Q Consensus 88 ~a~a~s~~lLli~R~L~GIg~G~~~~~~~a~IsE~fP~k~Rg~a~Gi~~ag~~LG~alg~ll~~~l~l~~~~GWR~~FlI 167 (706)
.. ..+...+.+..++.|++..........++.|.+|+++|++++|+.++...+|.++++.+.... .+..||+..|++
T Consensus 332 ~~-~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~p~~~g~l--~~~~g~~~~f~~ 408 (434)
T PRK11663 332 MP-FASYVMQAACFFTIGFFVFGPQMLIGMAAAECSHKEAAGAATGFVGLFAYLGAALSGYPLAKV--LEIWHWTGFFVV 408 (434)
T ss_pred cc-cccHHHHHHHHHHHHHHHhhHHHHHHHHHHhcccHhhHHhHHHHHHHHHHHHHHHhcccHHHH--HHhcccHHHHHH
Confidence 11 233333334444555443333333456778999999999999999999999999996555433 455689999999
Q ss_pred HHHHHHHHHHHHHhhccCC
Q 005249 168 LSIPALLYFAFAVFFLPES 186 (706)
Q Consensus 168 ~ail~LV~~ll~~lflpEs 186 (706)
.++++++.++....+.++.
T Consensus 409 ~~~~~~~~~~~~~~~~~~~ 427 (434)
T PRK11663 409 ISIAAGISALLLLPFLNAQ 427 (434)
T ss_pred HHHHHHHHHHHHHHHHhhh
Confidence 9988888776655555543
No 154
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.02 E-value=1.1e-08 Score=125.98 Aligned_cols=154 Identities=21% Similarity=0.231 Sum_probs=125.5
Q ss_pred HHHHHHcCCChh-HHHHHHHHHHHHHHHHHHHHHHHhhhhCChHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHH
Q 005249 30 VYIKKDLNLGTT-VEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVMLWSPNVYVLCIARLLDGFGV 108 (706)
Q Consensus 30 p~I~q~fGLS~s-~igLl~S~~~Ig~~Igsl~~G~LaDR~GRRrvLlig~iL~aIgsll~a~a~s~~lLli~R~L~GIg~ 108 (706)
+++.+.+|++.. +.+++.++..++.+++++++|++.||+++++++.++.++.+++.++..+..+.+.++++.++.|++.
T Consensus 257 ~~~~~~~g~s~~~~~g~~~~~~~ig~~~g~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 336 (1146)
T PRK08633 257 AYAKEVLGLDNTFQVQYLLAASAIGIGIGSLLAGRLSGRHIELGLVPLGALGLALSLFLLPTAPSLASVLVLFFLFGFSA 336 (1146)
T ss_pred HHHHHHhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCceEccchhHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHH
Confidence 445677899998 9999999999999999999999999999999999999888888888888888888889999999999
Q ss_pred HhHHHHHHHHHHhcCCcchhhHHhHHHHHHHHHHHHHHHHHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHhhcc
Q 005249 109 GLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSWRLMLGVLSIPALLYFAFAVFFLP 184 (706)
Q Consensus 109 G~~~~~~~a~IsE~fP~k~Rg~a~Gi~~ag~~LG~alg~ll~~~l~l~~~~GWR~~FlI~ail~LV~~ll~~lflp 184 (706)
++..+...+++.+.+|++.||+++|+.++...+|.+++..+...... ...++...|++.+.+.++..++.++.++
T Consensus 337 ~~~~~~~~~~~~~~~p~~~rg~~~~~~~~~~~lg~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 411 (1146)
T PRK08633 337 GLFIVPLNALIQFRAPEKELGKVLAANNFLQNVGMLLFLALTTLFSG-LGLSPAGLFYLIALVTLIGTLYTLLLLP 411 (1146)
T ss_pred HHhhHHHHHHHhhcCCccchhhhhHHHHHHHHHHHHHHHHHHHHHHH-hccCHHHHHHHHHHHHHHHHHHHHHHhH
Confidence 99989999999999999999999999999999998777544433322 2345666676666655554444444443
No 155
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.02 E-value=2e-08 Score=105.75 Aligned_cols=125 Identities=18% Similarity=0.177 Sum_probs=111.8
Q ss_pred HHHHHHHHH-cCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhCChHHHHHHHHHHHHHHHHHHhhhh-HHHHHHHHHHH
Q 005249 27 GAIVYIKKD-LNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVMLWSPN-VYVLCIARLLD 104 (706)
Q Consensus 27 ~~lp~I~q~-fGLS~s~igLl~S~~~Ig~~Igsl~~G~LaDR~GRRrvLlig~iL~aIgsll~a~a~s-~~lLli~R~L~ 104 (706)
...|.+.++ +|.+..+.+++.+...++..++.++.+++.||+|||+++..+.++.+++.++..+.++ ++.++++.++.
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (365)
T TIGR00900 232 ALFPYVQSKYLGRGSTHYGWVLAAFGLGALLGALLLGLLGRYFKRMALMTGAIFVIGLAILVVGLTPPNFPLFLVLWFAI 311 (365)
T ss_pred HHhHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHH
Confidence 556776665 8999999999999999999999999999999999999999888888888888877774 88888899999
Q ss_pred HHHHHhHHHHHHHHHHhcCCcchhhHHhHHHHHHHHHHHHHHHHHHH
Q 005249 105 GFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVF 151 (706)
Q Consensus 105 GIg~G~~~~~~~a~IsE~fP~k~Rg~a~Gi~~ag~~LG~alg~ll~~ 151 (706)
|++.+...+...+++.|.+|+++|+++.|+.+....+|..+++.+..
T Consensus 312 g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~g 358 (365)
T TIGR00900 312 GVGYGPINVPQGTLLQRRVPAELLGRVFGAQFSLSHAAWPLGLILAG 358 (365)
T ss_pred HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999865543
No 156
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.00 E-value=1.9e-09 Score=119.69 Aligned_cols=154 Identities=16% Similarity=0.147 Sum_probs=112.6
Q ss_pred HHHHHHhhhhhhhhHhcHHHHHHhhhh----------------------HHHHHhhhcchHHHHhHHHHHHHHHHHHHHH
Q 005249 523 GIQILQQFSGINGVLYYTPQILEQAGV----------------------AMKLMDVAGRRKLLLTTIPVLIVSLIILVIS 580 (706)
Q Consensus 523 ~~~~~~~~~g~~~~~~~~~~~~~~~g~----------------------~~~l~d~~grr~~~~~~~~~~~~~~~~~~~~ 580 (706)
.+..+.............|.+.++.|. .++++||+|||++++++..+..++.++....
T Consensus 8 ~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~ 87 (485)
T TIGR00711 8 MLGTFMAVLDSTIVNVAIPTIAGDLGSSLSQVQWVITSYMLANAISIPLTGWLAKRFGTRRLFLISTFAFTLGSLLCGVA 87 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCChhhhhHHHHHHHHHHHHHHHhHHHHHHHhCcHHHHHHHHHHHHHHHHHHhCc
Confidence 333333333445556667777766553 8999999999999999988888877766553
Q ss_pred hhhhhhhhhHHHHHHHHHHHHHHHHhhcccccchhhhhcccCCcchhhhHHHHHHHHHHHHHHHHHhHHHHHHHhhchhh
Q 005249 581 ETLQLISPVLKAGISTACVIIYFCCFVAAYGPIPNILCAEIFPTKVRGICIAICAMAYWICDIIVTYTLPVMLSSIGLAG 660 (706)
Q Consensus 581 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~~~~i~~~~~~~~~~~~g~~~ 660 (706)
.... ..++..++ .........+....++.|.+|++.|+.+.++..+...++..+++.+.+.+.+..||++
T Consensus 88 ~~~~---------~l~~~~~~-~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~w~~ 157 (485)
T TIGR00711 88 PNLE---------LMIIFRVI-QGFGGGPLIPLSFSTLLNIYPPEKRGRAMAIWGLTVLVAPALGPTLGGWIIENYHWRW 157 (485)
T ss_pred CCHH---------HHHHHHHH-HHhhhhhHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHhhhhhccHhHhccCcCcee
Confidence 2221 12222222 2222223446677889999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhcccCCCCC
Q 005249 661 AFGVYAVVCFISWVFVFLRVPETKGM 686 (706)
Q Consensus 661 ~~~~~~~~~~~~~~~~~~~~~et~~~ 686 (706)
.|++.+.++++..++.++.+||++..
T Consensus 158 ~f~~~~~~~~~~~~~~~~~~~~~~~~ 183 (485)
T TIGR00711 158 IFLINVPIGIIVVVVAFFILPRDKPA 183 (485)
T ss_pred hhhhhhHHHHHHHHHHHHHcCCcccc
Confidence 99998888888887777777776543
No 157
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=99.00 E-value=4.1e-08 Score=108.84 Aligned_cols=158 Identities=15% Similarity=0.105 Sum_probs=97.0
Q ss_pred HHHHHHH-HHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhCChHHHHHHHHHHHHHHHHHH--h--hhhHHHHHH
Q 005249 25 IAGAIVY-IKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVML--W--SPNVYVLCI 99 (706)
Q Consensus 25 is~~lp~-I~q~fGLS~s~igLl~S~~~Ig~~Igsl~~G~LaDR~GRRrvLlig~iL~aIgsll~a--~--a~s~~lLli 99 (706)
+...+|. +.+.+|.+..+.++..++..++..++.++.|+++||+|||+++.++.++.++..+... . .++....+.
T Consensus 262 ~~~~lp~~l~~~~g~s~~~~~~~~~i~~~~~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (432)
T PRK10406 262 FTTYMQKYLVNTAGMHANVASGIMTAALFVFMLIQPLIGALSDKIGRRTSMLCFGSLAALFTVPILSALQNVSSPYAAFG 341 (432)
T ss_pred HHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHH
Confidence 3344555 4566899999999989888888899999999999999999988776655443332221 1 123332222
Q ss_pred HHHHHHHHHHhHHHHHHHHHHhcCCcchhhHHhHHHHHHHHHH-HHHHHHHHHHHHHhccchhhHHHHHHHHHHHHHHHH
Q 005249 100 ARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGG-MFLAYCMVFGMSLLASPSWRLMLGVLSIPALLYFAF 178 (706)
Q Consensus 100 ~R~L~GIg~G~~~~~~~a~IsE~fP~k~Rg~a~Gi~~ag~~LG-~alg~ll~~~l~l~~~~GWR~~FlI~ail~LV~~ll 178 (706)
.-++.++..+...+....++.|++|++.|++++|+.+...++. ....+.+.. .......|...+++.++..++.++.
T Consensus 342 ~~~~~~~~~~~~~~~~~~~~~e~fp~~~r~t~~g~~~~~g~~~~g~~~p~~~~--~l~~~g~~~~~~~~~~~~~~i~~~~ 419 (432)
T PRK10406 342 LVMCALLIVSFYTSISGILKAEMFPAQVRALGVGLSYAVANALFGGSAEYVAL--SLKSIGMETAFFWYVTLMAVVAFLV 419 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCCccchhhhHHHHHHHHHHHhHHHHHHH--HHHHhCCCcHHHHHHHHHHHHHHHH
Confidence 2233334444444566788999999999999999987655442 222322222 2222223555555555555554443
Q ss_pred HHhhccC
Q 005249 179 AVFFLPE 185 (706)
Q Consensus 179 ~~lflpE 185 (706)
.+++++
T Consensus 420 -~~~l~~ 425 (432)
T PRK10406 420 -SLMLHR 425 (432)
T ss_pred -HHHhhh
Confidence 344444
No 158
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.00 E-value=3.6e-08 Score=108.11 Aligned_cols=130 Identities=17% Similarity=0.227 Sum_probs=103.1
Q ss_pred HHHHHHHHHHHHH-cCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhCChHHHHHHHHHHHHHHHHHHhh-hhHHHHHHH
Q 005249 23 ATIAGAIVYIKKD-LNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVMLWS-PNVYVLCIA 100 (706)
Q Consensus 23 ~iis~~lp~I~q~-fGLS~s~igLl~S~~~Ig~~Igsl~~G~LaDR~GRRrvLlig~iL~aIgsll~a~a-~s~~lLli~ 100 (706)
.......+++.++ ++ +....+++.++..++.+++.+++++++||+|+|+++.++.++.+++.++..+. ++.+.+++.
T Consensus 239 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (437)
T TIGR00792 239 NIKNGVQVYYFTYVLG-DPELFSYMGSIAIVAGLIGVLLFPRLVKKFGRKILFAGGILLMVLGYLIFFFAGSNLPLILVL 317 (437)
T ss_pred HHHcchhheeEeeecC-ChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcchhHHHHHHH
Confidence 3333334444443 34 45667788888899999999999999999999999999998888887777665 456777778
Q ss_pred HHHHHHHHHhHHHHHHHHHHhcCC-------cchhhHHhHHHHHHHHHHHHHHHHHHHHH
Q 005249 101 RLLDGFGVGLAVTLVPLYISETAP-------SEIRGRLNTLPQFTGSGGMFLAYCMVFGM 153 (706)
Q Consensus 101 R~L~GIg~G~~~~~~~a~IsE~fP-------~k~Rg~a~Gi~~ag~~LG~alg~ll~~~l 153 (706)
.++.|++.+...+...++++|..+ ++.+|.+.|+.+.+..+|..+++.+....
T Consensus 318 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~g~~lg~~i~g~l 377 (437)
T TIGR00792 318 IILAGFGQNFVTGLVWALVADTVDYGEWKTGVRAEGLVYSVRTFVRKLGQALAGFLVGLI 377 (437)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhhhhhhhhcCccchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 889999999999999999998865 45679999999999999999986665544
No 159
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=98.99 E-value=6.2e-08 Score=105.41 Aligned_cols=146 Identities=15% Similarity=0.105 Sum_probs=116.9
Q ss_pred HHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhCChHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHH
Q 005249 27 GAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVMLWSPNVYVLCIARLLDGF 106 (706)
Q Consensus 27 ~~lp~I~q~fGLS~s~igLl~S~~~Ig~~Igsl~~G~LaDR~GRRrvLlig~iL~aIgsll~a~a~s~~lLli~R~L~GI 106 (706)
...|.+.++.|.+..+.|++.++..++..+..++.|++.||+|+|+++.++.++.+++.++.+++++.+.+++..++.|+
T Consensus 226 ~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~ 305 (382)
T PRK11128 226 GFSAIYWQAAGYSASTIGYLWSLGVVAEVLIFAFSNRLFRRWSARDLLLLSAICGVVRWGLMGSTTALPWLIVIQILHCG 305 (382)
T ss_pred HHHHHHHHHCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHH
Confidence 34455557899999999999999999999999999999999999999999999999988888889999999999999999
Q ss_pred HHHhHHHHHHHHHHhcCCcchhhHHhHHHH-HHHHHHHHHHHHHHHHHHHhccchhhHHHHHHHHHHHHHH
Q 005249 107 GVGLAVTLVPLYISETAPSEIRGRLNTLPQ-FTGSGGMFLAYCMVFGMSLLASPSWRLMLGVLSIPALLYF 176 (706)
Q Consensus 107 g~G~~~~~~~a~IsE~fP~k~Rg~a~Gi~~-ag~~LG~alg~ll~~~l~l~~~~GWR~~FlI~ail~LV~~ 176 (706)
+.+...+....++.+. +++++++..++.. ....+|..+++.+.... .+..|+ ..|+..+++.++.+
T Consensus 306 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~ig~~i~G~l--~~~~g~-~~~~~~~~~~~~~~ 372 (382)
T PRK11128 306 TFTVCHLAAMRYIAAR-PGSEVIRLQALYSALAMGGSIAIMTVLSGFL--YQHLGA-GVFWVMALVALPAL 372 (382)
T ss_pred HHHHHHHHHHHHHHHC-CHhhhHHHHHHHHHHHHHHHHHHHHHHHHHH--HHhccH-HHHHHHHHHHHHHH
Confidence 9999988888888887 5566788888875 55677777775554433 344466 45666666555433
No 160
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=98.99 E-value=7.3e-09 Score=114.44 Aligned_cols=126 Identities=12% Similarity=0.062 Sum_probs=95.9
Q ss_pred HHHHHhhhcchHHHHhHHHHHHHHHHHHHHHhhhhhhhhhHHHHHHHHHHHHHHHHhhcccccchhhhhcccCCcchhhh
Q 005249 550 AMKLMDVAGRRKLLLTTIPVLIVSLIILVISETLQLISPVLKAGISTACVIIYFCCFVAAYGPIPNILCAEIFPTKVRGI 629 (706)
Q Consensus 550 ~~~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~ 629 (706)
.++++||+|||+++..+..+..++.++..+..... ..+.. -+.......+..+....++.|.+|++.|++
T Consensus 63 ~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~~~~---------~l~~~-r~l~G~~~~~~~~~~~~~~~~~~~~~~rg~ 132 (412)
T TIGR02332 63 SNIMLAIIGARRWIAGIMVLWGIASTATMFATGPE---------SLYLL-RILVGIAEAGFLPGILLYLTFWFPAYFRAR 132 (412)
T ss_pred HHHHHHHhChHHHHHHHHHHHHHHHHHHHHhcCHH---------HHHHH-HHHHHHHHhhHHHHHHHHHHHHcCHHHHHH
Confidence 78999999999999988888887777766543222 11111 122222222344666678899999999999
Q ss_pred HHHHHHHHHHHHHHHHHhHHHHHHH------hhchhhHHHHHHHHHHHHHHHHHhcccCCCC
Q 005249 630 CIAICAMAYWICDIIVTYTLPVMLS------SIGLAGAFGVYAVVCFISWVFVFLRVPETKG 685 (706)
Q Consensus 630 ~~~~~~~~~~~~~~i~~~~~~~~~~------~~g~~~~~~~~~~~~~~~~~~~~~~~~et~~ 685 (706)
+.++.++...+|.++++.+.+.+.+ ..||+.+|.+.++.+++..++.++++||++.
T Consensus 133 ~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~gwr~~f~~~~~~~l~~~~~~~~~~~~~p~ 194 (412)
T TIGR02332 133 ANALFMIAMPVTMALGLILSGYILALDGLMALKGWQWLFLLEGFPSVILGVMTWFWLDDSPD 194 (412)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCccchhHHHHHHHHHHHHHHHHHhhccCCCcc
Confidence 9999999999999999999998875 3599999999888888877777788888864
No 161
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=98.99 E-value=3.1e-08 Score=108.01 Aligned_cols=143 Identities=20% Similarity=0.257 Sum_probs=118.6
Q ss_pred CCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhCChHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhHHHHHH
Q 005249 37 NLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVMLWSPNVYVLCIARLLDGFGVGLAVTLVP 116 (706)
Q Consensus 37 GLS~s~igLl~S~~~Ig~~Igsl~~G~LaDR~GRRrvLlig~iL~aIgsll~a~a~s~~lLli~R~L~GIg~G~~~~~~~ 116 (706)
+.+....+.+.++..+...++.++.|++.||+|+|+.++++.++.+++.++...+++.+.+++++++.|++.+.......
T Consensus 250 ~~~~~~~g~~~~~~~i~~~~~~~~~g~l~~r~g~~~~l~~~~~l~~l~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~ 329 (396)
T TIGR00882 250 QQGTRVFGYVTTMGELLNALIMFCAPLIINRIGAKNALLIAGTIMSVRIIGSSFATTALEVVILKMLHAFEVPFLLVGCF 329 (396)
T ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHH
Confidence 55667788899999999999999999999999999999999999999888878888999889999999999887777777
Q ss_pred HHHHhcCCcchhhHHhHH-HHHHHHHHHHHHHHHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHh
Q 005249 117 LYISETAPSEIRGRLNTL-PQFTGSGGMFLAYCMVFGMSLLASPSWRLMLGVLSIPALLYFAFAVF 181 (706)
Q Consensus 117 a~IsE~fP~k~Rg~a~Gi-~~ag~~LG~alg~ll~~~l~l~~~~GWR~~FlI~ail~LV~~ll~~l 181 (706)
.+..+..+++.++...+. .+....+|.++++.+.... .+..||+..|.+.+++.++..++..+
T Consensus 330 ~~~~~~~~~~~~at~~~~~~~~~~~lg~~~~~~l~G~l--~~~~G~~~~f~~~~~~~~i~~~~~~~ 393 (396)
T TIGR00882 330 KYITSQFDVRLSATIYLIGFQFAKQLAMIFLSTLAGNM--YDSIGFQGAYLVLGCIVLLFTLISVF 393 (396)
T ss_pred HHHHHhCCcceEEEeehHHHHHHHHHHHHHHHHhHHHH--HHhcccHHHHHHHHHHHHHHHHHHHH
Confidence 888888888888887766 5778899999985554443 34558999999988888776665544
No 162
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=98.97 E-value=8.5e-08 Score=107.63 Aligned_cols=157 Identities=23% Similarity=0.250 Sum_probs=116.5
Q ss_pred HHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhC-----ChHHHHHHHHHHHHHHHHHHhh----hhHHH
Q 005249 26 AGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLG-----RRPMLILSSVLYFVSGLVMLWS----PNVYV 96 (706)
Q Consensus 26 s~~lp~I~q~fGLS~s~igLl~S~~~Ig~~Igsl~~G~LaDR~G-----RRrvLlig~iL~aIgsll~a~a----~s~~l 96 (706)
....+++++++|+++.+...+.++..+...+- ++.|.++|-+. ||+-++++.++..++.+..+.. .+...
T Consensus 10 ~~~~~~l~~~l~ls~~~~~~~~~~~~lPw~~K-p~~g~lsD~~pi~G~rr~~Y~~i~~~~~~~~~~~~~~~~~~~~s~~~ 88 (433)
T PF03092_consen 10 LAIYPFLKDDLGLSPAQLQRLSSLASLPWSIK-PLYGLLSDSFPIFGYRRKPYMIIGWLLGAVSALVLALLPASESSAAI 88 (433)
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHhCchHHh-hhHHhhcccccccCCcchHHHHHHHHHHHHHHHHHHhcccccchhhh
Confidence 34567899999999999999888888887765 45899999874 4445556777776666655553 35677
Q ss_pred HHHHHHHHHHHHHhHHHHHHHHHHhcCC--cchhhHHhHHHHHHHHHHHHHHHHHHHHHHHhccchhhHHHHHHHHHHHH
Q 005249 97 LCIARLLDGFGVGLAVTLVPLYISETAP--SEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSWRLMLGVLSIPALL 174 (706)
Q Consensus 97 Lli~R~L~GIg~G~~~~~~~a~IsE~fP--~k~Rg~a~Gi~~ag~~LG~alg~ll~~~l~l~~~~GWR~~FlI~ail~LV 174 (706)
..++-++..+|......++.+++.|... ++.||...+.......+|.+++...... .....+++..|.+.+++.++
T Consensus 89 ~~~~l~la~~g~a~~DV~aDa~vvE~~~~~p~~~g~lqS~~~~~~~~G~lv~~~l~G~--l~~~~~~~~~f~i~~~~~~l 166 (433)
T PF03092_consen 89 AVVLLFLASFGYAFADVAADALVVELARREPESRGDLQSFVWGVRSVGSLVGSLLSGP--LLDSFGPQGVFLISAALPLL 166 (433)
T ss_pred HHHHHHHHHHHHHHHHHhhhHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHHHHhhhh--hhhcCCCeEEehHHHHHHHH
Confidence 7777888899999999999999998874 3336777778888888888888544433 34556888889888887777
Q ss_pred HHHHHHhhccC
Q 005249 175 YFAFAVFFLPE 185 (706)
Q Consensus 175 ~~ll~~lflpE 185 (706)
..+..+++.+|
T Consensus 167 ~~~~~~~~~~e 177 (433)
T PF03092_consen 167 MLIVALFLLEE 177 (433)
T ss_pred HHHHHHHhhhh
Confidence 66665555555
No 163
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=98.96 E-value=7.3e-09 Score=93.42 Aligned_cols=124 Identities=17% Similarity=0.257 Sum_probs=95.7
Q ss_pred HHHHHhhhcchHHHHhHHHHHHHHHHHHHHHhhhhhhhhhHHHHHHHHHHHHHHHHhhcccccchhhhhcccCCcchhhh
Q 005249 550 AMKLMDVAGRRKLLLTTIPVLIVSLIILVISETLQLISPVLKAGISTACVIIYFCCFVAAYGPIPNILCAEIFPTKVRGI 629 (706)
Q Consensus 550 ~~~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~ 629 (706)
.+++.||+|||+.+..+..+..++.+.+..... .+....+.++...+.+ ...+..+.++.|.+|++.|++
T Consensus 18 ~g~~~d~~g~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~ 87 (141)
T TIGR00880 18 SGLLTDRFGRKPVLLVGLFIFVLSTAMFALSSN---------ITVLIIARFLQGFGAA-FALVAGAALIADIYPPEERGV 87 (141)
T ss_pred HHHHHhhcchhHHHHHHHHHHHHHHHHHHHhcc---------HHHHHHHHHHHHHHHH-HHHHhHHHHHHHHCChhhhhH
Confidence 689999999999998887777777665544321 1222222333332222 234667778899999999999
Q ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHhhchhhHHHHHHHHHHHHHHHHHhcccCC
Q 005249 630 CIAICAMAYWICDIIVTYTLPVMLSSIGLAGAFGVYAVVCFISWVFVFLRVPET 683 (706)
Q Consensus 630 ~~~~~~~~~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~et 683 (706)
+.++.++...++..+++.+.+.+.+..+|+..|.+.+++++++.++.++..|||
T Consensus 88 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (141)
T TIGR00880 88 ALGLMSAGIALGPLLGPPLGGVLAQFLGWRAPFLFLAILALAAFILLAFLLPET 141 (141)
T ss_pred HHHHHHHhHHHHHHHhHHhHHHHhcccchHHHHHHHHHHHHHHHHHHhhcCCCC
Confidence 999999999999999999999999989999899999988888888888877775
No 164
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=98.96 E-value=7.4e-08 Score=113.10 Aligned_cols=179 Identities=17% Similarity=0.193 Sum_probs=149.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhCChHHHHHHHHHHHHHHH
Q 005249 7 VAIAATIGNFLQGWDNATIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGL 86 (706)
Q Consensus 7 iliil~L~~fl~gl~~~iis~~lp~I~q~fGLS~s~igLl~S~~~Ig~~Igsl~~G~LaDR~GRRrvLlig~iL~aIgsl 86 (706)
.++++++..+..++....+...+..+.+.|+++.++.|++.+.+-++..+...+..+..-|.-|-+++-+|.++++++++
T Consensus 98 fl~~l~~~~~~q~l~~~y~~s~IttiErRF~i~Ss~sG~I~s~~dig~~l~i~fVsYfG~r~HrPr~Ig~G~~~m~lgsl 177 (735)
T KOG3626|consen 98 FLVLLSLAAFAQGLYVGYFNSVITTIERRFKISSSQSGLIASSYDIGNLLLIIFVSYFGSRGHRPRWIGIGLVLMGLGSL 177 (735)
T ss_pred HHHHHHHHHHHHHhhhhhhhhhhhhhhhhcCCCCCcceeEeeecccchhhhhHhHHHhccccCccceeeechhHHHHHHH
Confidence 45566777777777777788888999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhh--------------------h---------------------------h----HH-HHHHHHHHHHHHHHhHHHH
Q 005249 87 VMLWS--------------------P---------------------------N----VY-VLCIARLLDGFGVGLAVTL 114 (706)
Q Consensus 87 l~a~a--------------------~---------------------------s----~~-lLli~R~L~GIg~G~~~~~ 114 (706)
++++- + . ++ +++++.++.|+|....++.
T Consensus 178 l~alPHf~~~~y~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llff~~q~l~GIG~Tpi~tl 257 (735)
T KOG3626|consen 178 LFALPHFFSGPYEYELEVIKQSVENPSSSLSFCCCNKSTNLCRPSPENSKREKESTSYPFLLFFLGQLLLGIGATPIFTL 257 (735)
T ss_pred HHhChHHhcCcchhhhhhhhccccCCccccchhhccCCccccCCCCCcccccccCCchhHHHHHHHHHHhhcCCCCCccC
Confidence 99871 0 0 23 5667799999999999999
Q ss_pred HHHHHHhcCCcchhhHHhHHHHHHHHHHHHHHHHHHHHHHHh--cc---------------chhhHHHHHHHHHHHHHHH
Q 005249 115 VPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLL--AS---------------PSWRLMLGVLSIPALLYFA 177 (706)
Q Consensus 115 ~~a~IsE~fP~k~Rg~a~Gi~~ag~~LG~alg~ll~~~l~l~--~~---------------~GWR~~FlI~ail~LV~~l 177 (706)
..+|+=|...+++-+..+|+..+...+|.++|.++....... +. -.|+.-|++.+++.++..+
T Consensus 258 GisYiDDnvk~~~SplYlgi~~~~~~lGPaiGfllgS~~l~lYvD~~~~~~~it~~DPrWIGAWWlGFLi~g~~~~~~a~ 337 (735)
T KOG3626|consen 258 GISYIDDNVKKKNSPLYLGILYSMAILGPAIGFLLGSFCLKLYVDFGLSPIGITPTDPRWIGAWWLGFLICGALLLFSAV 337 (735)
T ss_pred CCccccccccccCCcHHHHHHHHHHHhhhHHHHHHHHHHHHeeeccccCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999998777665321 11 0488899999998888776
Q ss_pred HHHhhccCC
Q 005249 178 FAVFFLPES 186 (706)
Q Consensus 178 l~~lflpEs 186 (706)
.. +++|..
T Consensus 338 p~-f~fPk~ 345 (735)
T KOG3626|consen 338 PL-FFFPKE 345 (735)
T ss_pred HH-HhCccc
Confidence 64 455543
No 165
>PRK10504 putative transporter; Provisional
Probab=98.95 E-value=7.2e-08 Score=107.44 Aligned_cols=138 Identities=12% Similarity=0.149 Sum_probs=110.9
Q ss_pred HHHHHHHHHHHHHHHHHHH-HcCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhCChHHHHHHHHHHHHHHHHHHhh---
Q 005249 16 FLQGWDNATIAGAIVYIKK-DLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVMLWS--- 91 (706)
Q Consensus 16 fl~gl~~~iis~~lp~I~q-~fGLS~s~igLl~S~~~Ig~~Igsl~~G~LaDR~GRRrvLlig~iL~aIgsll~a~a--- 91 (706)
++............|++.+ .+|.+..+.+++.....++..++.++.|++.||+|+|+++.++.++.+++.++..+.
T Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~ 350 (471)
T PRK10504 271 FAGRIGSGMLPFMTPVFLQIGLGFSPFHAGLMMIPMVLGSMGMKRIVVQVVNRFGYRRVLVATTLGLALVSLLFMLVALL 350 (471)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHhcccc
Confidence 3333444445556677666 589999999999999999999999999999999999999999988888877666653
Q ss_pred hhHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCcchhhHHhHHHHHHHHHHHHHHHHHHHHH
Q 005249 92 PNVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGM 153 (706)
Q Consensus 92 ~s~~lLli~R~L~GIg~G~~~~~~~a~IsE~fP~k~Rg~a~Gi~~ag~~LG~alg~ll~~~l 153 (706)
++.+.+.+..++.|++.+...+....++.+..|++.++.++++.++...+|..+|+.+....
T Consensus 351 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~i~g~l 412 (471)
T PRK10504 351 GWYYLLPFVLFLQGMVNSTRFSSMNTLTLKDLPDNLASSGNSLLSMIMQLSMSIGVTIAGLL 412 (471)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHhccchHHHHHHHHHHHHHHHHHHHHHH
Confidence 33444455677888999988888899999999999999999999999999999886665443
No 166
>TIGR00898 2A0119 cation transport protein.
Probab=98.94 E-value=2.2e-08 Score=112.49 Aligned_cols=148 Identities=24% Similarity=0.229 Sum_probs=113.1
Q ss_pred HHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhCChHHHHHHHHHHHHHHHHHHhhhhH--HHHHHHHHHHHHHH
Q 005249 31 YIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVMLWSPNV--YVLCIARLLDGFGV 108 (706)
Q Consensus 31 ~I~q~fGLS~s~igLl~S~~~Ig~~Igsl~~G~LaDR~GRRrvLlig~iL~aIgsll~a~a~s~--~lLli~R~L~GIg~ 108 (706)
.....++.+.. +...+..+..+++.++.+++.||+|||+++.++.++.+++.++..+.++. +..++..++.+++.
T Consensus 348 ~~~~~~~~~~~---~~~~~~~~~~i~~~~~~~~l~dr~grr~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 424 (505)
T TIGR00898 348 LDLGNLGGNIY---LDLFISGLVELPAKLITLLLIDRLGRRYTMAASLLLAGVALLLLLFVPVDLYFLRTALAVLGKFGI 424 (505)
T ss_pred ccccccCCChH---HHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHH
Confidence 33445555533 23334556777888899999999999999999999998888887776543 55556667777888
Q ss_pred HhHHHHHHHHHHhcCCcchhhHHhHHHHHHHHHHHHHHHHHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHhhccCC
Q 005249 109 GLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSWRLMLGVLSIPALLYFAFAVFFLPES 186 (706)
Q Consensus 109 G~~~~~~~a~IsE~fP~k~Rg~a~Gi~~ag~~LG~alg~ll~~~l~l~~~~GWR~~FlI~ail~LV~~ll~~lflpEs 186 (706)
+..++..+.+..|.+|++.|+.++|+.++...+|.++++.+.. . ...++...+.+.++..++..++ .+++||+
T Consensus 425 ~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~ig~~i~p~i~~-~---~~~~~~~~~~~~~~~~~~~~~~-~~~lpet 497 (505)
T TIGR00898 425 TSAFQMVYLYTAELYPTVVRNLGVGVCSTMARVGSIISPFLVY-L---GEKWLFLPLVLFGGLALLAGIL-TLFLPET 497 (505)
T ss_pred HHHHHHHHHHhcccccHHHHhhhHhHHHHHHHHHHHHHhHHHH-H---HHHHHhhHHHHHHHHHHHHHHH-HHcCcCC
Confidence 8888888999999999999999999999999999999976654 2 2335667777777777776544 4677887
No 167
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=98.92 E-value=1.3e-08 Score=115.26 Aligned_cols=157 Identities=15% Similarity=0.070 Sum_probs=111.1
Q ss_pred HHHHHHHHHHhhhhhhhhHhcHHHHHHhhhh----------------------HHHHHhhhcchHHHHhHHHHHHHHHHH
Q 005249 519 LVGVGIQILQQFSGINGVLYYTPQILEQAGV----------------------AMKLMDVAGRRKLLLTTIPVLIVSLII 576 (706)
Q Consensus 519 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~----------------------~~~l~d~~grr~~~~~~~~~~~~~~~~ 576 (706)
++.+++..+....-...+..-+|.+.++.+. .|+++||+|||++++++..+..++.++
T Consensus 8 ~~~~~~~~~~~~ld~tiv~~a~p~i~~~l~~s~~~~~~~~~~~~l~~~~~~~~~G~l~D~~Grk~~l~~~~~~~~~~~~~ 87 (495)
T PRK14995 8 LVIIVLVYIPVAIDATVLHVAAPTLSMTLGASGNELLWIIDIYSLVMAGMVLPMGALGDRIGFKRLLMLGGTLFGLASLA 87 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHH
Confidence 3333444444333444455556777666543 899999999999999999888888887
Q ss_pred HHHHhhhhhhhhhHHHHHHHHHHHHHHHHhhcccccchhhhhcccC-CcchhhhHHHHHHHHHHHHHHHHHhHHHHHHHh
Q 005249 577 LVISETLQLISPVLKAGISTACVIIYFCCFVAAYGPIPNILCAEIF-PTKVRGICIAICAMAYWICDIIVTYTLPVMLSS 655 (706)
Q Consensus 577 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-p~~~r~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 655 (706)
........ ..+++-.+..++. .+..+.....+.+.+ |++.|+++.|+......++..++|.+.+.+.+.
T Consensus 88 ~~~a~~~~---------~li~~r~l~G~g~-~~~~~~~~~~l~~~~~~~~~r~~~~g~~~~~~~~g~~~gp~lgg~l~~~ 157 (495)
T PRK14995 88 AAFSPTAS---------WLIATRALLAIGA-AMIVPATLAGIRATFTEEKQRNMALGVWAAVGSGGAAFGPLVGGILLEH 157 (495)
T ss_pred HHHcCCHH---------HHHHHHHHHHHHH-HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 76643322 2222222222222 223344444455555 778999999999999999999999999999999
Q ss_pred hchhhHHHHHHHHHHHHHHHHHhcccCCCC
Q 005249 656 IGLAGAFGVYAVVCFISWVFVFLRVPETKG 685 (706)
Q Consensus 656 ~g~~~~~~~~~~~~~~~~~~~~~~~~et~~ 685 (706)
.||++.|++...++++..++.++++|+.++
T Consensus 158 ~gwr~~f~i~~~~~~~~~~l~~~~l~~~~~ 187 (495)
T PRK14995 158 FYWGSVFLINVPIVLVVMGLTARYVPRQAG 187 (495)
T ss_pred CChHHHHHHHHHHHHHHHHHHHHhCCCCCC
Confidence 999999999888888888888787887644
No 168
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=98.92 E-value=1.1e-07 Score=109.52 Aligned_cols=152 Identities=23% Similarity=0.220 Sum_probs=131.1
Q ss_pred HHHHHHHH-HHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhCChHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHH
Q 005249 26 AGAIVYIK-KDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVMLWSPNVYVLCIARLLD 104 (706)
Q Consensus 26 s~~lp~I~-q~fGLS~s~igLl~S~~~Ig~~Igsl~~G~LaDR~GRRrvLlig~iL~aIgsll~a~a~s~~lLli~R~L~ 104 (706)
...+|.+. +.+|.+...+|++.+++.+|.++++++.+++.+|+++++++..+.++++++.+..+++++.+..+++.++.
T Consensus 238 ~aLlPl~a~~~l~~~a~~yGll~a~~gvGai~Gal~~~~l~~~~~~~~lv~~~~~~~a~~~~~lal~~~~~~~~~~l~l~ 317 (524)
T PF05977_consen 238 WALLPLFARDVLGGGASGYGLLLAAFGVGAILGALLLPRLRRRLSSRRLVLLASLLFALALLLLALSPSFWLALIALFLA 317 (524)
T ss_pred HHhhhHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhcccCcchhhHHHHHHHHHHHHHHhcchHHHHHHHHHHHH
Confidence 34567665 56899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhHHHHHHHHHHhcCCcchhhHHhHHHHHHHHHHHHHHHHHHHHHHHhccchhhHHHHHHHHHHHHHHHHH
Q 005249 105 GFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSWRLMLGVLSIPALLYFAFA 179 (706)
Q Consensus 105 GIg~G~~~~~~~a~IsE~fP~k~Rg~a~Gi~~ag~~LG~alg~ll~~~l~l~~~~GWR~~FlI~ail~LV~~ll~ 179 (706)
|++.........+.+.+..|++.||++++++++....+..+|.+... ...+..|.+..+.+.++..++..++.
T Consensus 318 G~~~~~~~~~~~t~~Q~~~P~~~~GRv~si~~~~~~g~~~lGsll~G--~la~~~g~~~al~~a~~~lll~~~~~ 390 (524)
T PF05977_consen 318 GAAWIIANSSLNTLVQLSVPDWVRGRVFSIYQMVFFGGMPLGSLLWG--FLADHFGVRTALLIAGAALLLSALIA 390 (524)
T ss_pred HHHHHHHHHHHHHHHHHhCCHHHHhHHHHHHHHHHHHHHHHHHHHHH--HHHHHhCHHHHHHHHHHHHHHHHHHH
Confidence 99999998899999999999999999999999999988888855443 34556688888877776555544443
No 169
>PRK11010 ampG muropeptide transporter; Validated
Probab=98.92 E-value=1.4e-07 Score=107.18 Aligned_cols=151 Identities=12% Similarity=0.115 Sum_probs=113.5
Q ss_pred HHHHHHHcCCChhHHHHHHH-HHHHHHHHHHHHHHHHhhhhCChHHHHHHHHHHHHHHHHH---Hhh-hhHHHHHHHHHH
Q 005249 29 IVYIKKDLNLGTTVEGLVVA-MSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVM---LWS-PNVYVLCIARLL 103 (706)
Q Consensus 29 lp~I~q~fGLS~s~igLl~S-~~~Ig~~Igsl~~G~LaDR~GRRrvLlig~iL~aIgsll~---a~a-~s~~lLli~R~L 103 (706)
.|++.+++|++..+.+++.. ...++.+++.+++|+++||+|+|+.+.++.++.+++.+++ +.. ++.+.+.+.-++
T Consensus 246 ~~~l~~~~G~s~~~~g~~~~~~g~i~~iiG~ll~G~L~dr~g~~~~l~i~~~l~~l~~l~~~~l~~~~~~~~~l~~~~~l 325 (491)
T PRK11010 246 TTFLIRGVGFDAGEVGLVNKTLGLLATIVGALYGGILMQRLSLFRALMIFGILQGVSNAGYWLLSITDKNLYSMGAAVFF 325 (491)
T ss_pred HHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHH
Confidence 35566789999999999874 5668999999999999999999998887666555544332 232 355555556666
Q ss_pred HHHHHHhHHHHHHHHHHhcCCcchhhHHhHHHHHHHHHHHHHHHHHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHh
Q 005249 104 DGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSWRLMLGVLSIPALLYFAFAVF 181 (706)
Q Consensus 104 ~GIg~G~~~~~~~a~IsE~fP~k~Rg~a~Gi~~ag~~LG~alg~ll~~~l~l~~~~GWR~~FlI~ail~LV~~ll~~l 181 (706)
..+..|...+...++..+..+++.+++..++.++...+|.++++.+.. ...+..||+..|.+.++++++.+++..+
T Consensus 326 ~~~~~g~~~~~~~a~~~~l~~~~~~~t~~gl~~s~~~lg~~~~~~~~G--~l~~~~G~~~~f~~~~~~~l~~l~~~~~ 401 (491)
T PRK11010 326 ENLCGGMGTAAFVALLMTLCNKSFSATQFALLSALSAVGRVYVGPVAG--WFVEAHGWPTFYLFSVAAAVPGLLLLLV 401 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHHHH--HHHHHhChHHHHHHHHHHHHHHHHHHHH
Confidence 666666666777888999999999999999999999999887754433 3344568999998888888876655433
No 170
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=98.90 E-value=1.5e-07 Score=102.53 Aligned_cols=148 Identities=13% Similarity=-0.051 Sum_probs=109.4
Q ss_pred HHHHHHHHcCCChhHHHHHHHHHHH-HHHHHHHHHHHHhhhhCChHHHHHHHHHHHHHHHHHHh------hhhHHHHHHH
Q 005249 28 AIVYIKKDLNLGTTVEGLVVAMSLI-GATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVMLW------SPNVYVLCIA 100 (706)
Q Consensus 28 ~lp~I~q~fGLS~s~igLl~S~~~I-g~~Igsl~~G~LaDR~GRRrvLlig~iL~aIgsll~a~------a~s~~lLli~ 100 (706)
..+.+.+|.|++.++.+++..+..+ ...++.+++|++.||+|+|+++..+.++.++..+.... .++...++..
T Consensus 230 ~~~~~l~~~G~s~~~ig~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (390)
T TIGR02718 230 LSKLYLVDAGWPLEWIGRLGMAGGAVTVLLGCGGGAWLVRRAGLWRTFILGVGLAGSLALLWFAQAAFWLAPGIAVAWSC 309 (390)
T ss_pred HhhHHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHcccCCcHHHHHHH
Confidence 4455667789999999999888764 66777899999999999999998877665333332221 1233444455
Q ss_pred HHHHHHHHHhHHHHHHHHHHhcCCc-chhhHHhHHHHHHHHHHHHHHHHHHHHHHHhccchhhHHHHHHHHHHHHHHH
Q 005249 101 RLLDGFGVGLAVTLVPLYISETAPS-EIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSWRLMLGVLSIPALLYFA 177 (706)
Q Consensus 101 R~L~GIg~G~~~~~~~a~IsE~fP~-k~Rg~a~Gi~~ag~~LG~alg~ll~~~l~l~~~~GWR~~FlI~ail~LV~~l 177 (706)
.++.+++.+...+...+++.+..++ +.+++.+++.++..++|..+++...... .+..||+..|.+.+++.++.++
T Consensus 310 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lg~~~g~~~~G~l--~~~~G~~~~f~~~~~~~l~a~~ 385 (390)
T TIGR02718 310 SAFGSLITGITSVAIYTAFMRFAGDGDQAGTDVTAVQSTRDLGELIASSIAGYL--TDRFGYAGGFLSGTVLAVLAIL 385 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCcccchHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHccHHHHHHHHHHHHHHHH
Confidence 5666777788878888888888776 8899999999999999999996665444 3455888888887776666443
No 171
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=98.90 E-value=2.1e-07 Score=105.91 Aligned_cols=160 Identities=19% Similarity=0.165 Sum_probs=131.5
Q ss_pred HHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhCCh--HHHHHHHHHHHHHHHHHHh--------hhhH
Q 005249 25 IAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRR--PMLILSSVLYFVSGLVMLW--------SPNV 94 (706)
Q Consensus 25 is~~lp~I~q~fGLS~s~igLl~S~~~Ig~~Igsl~~G~LaDR~GRR--rvLlig~iL~aIgsll~a~--------a~s~ 94 (706)
+.....+..+++|++..+...+.-+..+..++|++++|++.||+|.| ++++++.+++.+..+...+ .++.
T Consensus 301 ~~~~~i~a~~~lg~s~~~l~~~~l~~~i~a~~Ga~~~g~l~~r~g~k~~~~l~~~l~~~~~i~~~g~~G~~~~~~g~~~~ 380 (477)
T PF11700_consen 301 ISFAGIYATEVLGMSTTQLIVFGLVVQIVAIIGALLFGWLQDRFGPKTKRTLLISLILWIIIPLYGLFGFWPSFFGLKSP 380 (477)
T ss_pred HHHHHHHHHHhcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHHHHhhhcccCcccH
Confidence 34445566679999999999999999999999999999999999999 8888888888665555544 5788
Q ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHhcCCcchhhHHhHHHHHHHHHHHHHHHHHHHHHHHhccchhhHHHHHHHHHHHH
Q 005249 95 YVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSWRLMLGVLSIPALL 174 (706)
Q Consensus 95 ~lLli~R~L~GIg~G~~~~~~~a~IsE~fP~k~Rg~a~Gi~~ag~~LG~alg~ll~~~l~l~~~~GWR~~FlI~ail~LV 174 (706)
+.+.+.-++.|+..|..++..-++.++..|+++.+..+|++.......+.+||++........ .+-|+.+....++.++
T Consensus 381 ~~f~~~a~~~G~~~G~~qs~sRs~~~~LiP~g~e~efFgly~i~gk~ss~lGPll~g~i~~~t-g~~r~g~~~l~~lf~~ 459 (477)
T PF11700_consen 381 WEFWVLAVLIGLFMGGIQSASRSLFSRLIPPGREAEFFGLYAITGKASSWLGPLLFGLITDAT-GSQRYGFLFLLVLFLI 459 (477)
T ss_pred HHHHHHHHHHHHHhhhHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CCchhHHHHHHHHHHH
Confidence 889999999999999999999999999999999999999999999999999977765554333 2478888777776666
Q ss_pred HHHHHHhhccCC
Q 005249 175 YFAFAVFFLPES 186 (706)
Q Consensus 175 ~~ll~~lflpEs 186 (706)
.+++ +++++..
T Consensus 460 gl~l-l~~v~~~ 470 (477)
T PF11700_consen 460 GLIL-LFFVDVE 470 (477)
T ss_pred HHHH-Hhhccch
Confidence 5544 3555543
No 172
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=98.89 E-value=4.2e-06 Score=92.70 Aligned_cols=120 Identities=21% Similarity=0.168 Sum_probs=93.9
Q ss_pred HHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhC-----ChHHHH-HHHHHHHHHHHHHHhh-----h--------
Q 005249 32 IKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLG-----RRPMLI-LSSVLYFVSGLVMLWS-----P-------- 92 (706)
Q Consensus 32 I~q~fGLS~s~igLl~S~~~Ig~~Igsl~~G~LaDR~G-----RRrvLl-ig~iL~aIgsll~a~a-----~-------- 92 (706)
+..|++++..-.+.+.++..+... ..+..|+.+|+.+ ||..++ .|.++...+..+..++ .
T Consensus 6 MIvEL~vpA~lv~~lval~~~~ap-~R~~~G~~SD~~~s~~G~rRtPyI~~G~~~~~~g~~~ap~a~~~l~~~~~~~~~~ 84 (403)
T PF03209_consen 6 MIVELGVPAWLVALLVALHYLVAP-LRVWFGHRSDTHPSILGWRRTPYIWGGTLLQAGGLAIAPFALLLLAESGQQSSGP 84 (403)
T ss_pred HHHHhccHHHHHHHHHHHHHHHHH-HHHHhccccccCcccCcCCchhhhHHHHHHHHHHHHHHHHHHHHHcccccccccc
Confidence 556899999999999998877766 5778999999999 886655 5666655555544442 1
Q ss_pred h-HH--HHHHHHHHHHHHHHhHHHHHHHHHHhcCCcchhhHHhHHHHHHHHHHHHHHHHHHHH
Q 005249 93 N-VY--VLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFG 152 (706)
Q Consensus 93 s-~~--lLli~R~L~GIg~G~~~~~~~a~IsE~fP~k~Rg~a~Gi~~ag~~LG~alg~ll~~~ 152 (706)
. .+ ...++.++.|+|.+.......++++|..|+++|+++.++..++.-+|.+++.+....
T Consensus 85 ~~~g~~~a~l~F~l~G~G~~~s~T~~lALl~D~~~e~~R~~~v~ivw~Mli~G~iv~ai~~g~ 147 (403)
T PF03209_consen 85 FWLGLALAALAFLLYGLGVHASGTSFLALLADLAPEERRPRVVAIVWVMLIVGIIVSAIVFGR 147 (403)
T ss_pred cHHHHHHHHHHHHHHHhhHhHhHHHHHHHHHhcCCHhhhhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 1 22 333457788999999999999999999999999999999999999999998655543
No 173
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=98.89 E-value=3.6e-08 Score=109.14 Aligned_cols=126 Identities=18% Similarity=0.193 Sum_probs=96.0
Q ss_pred HHHHHhhhcchHHHHhHHHHHHHHHHHHHHHhhhhhhhhhHHHHHHHHHHHHHHHHhhcccccchhhhhcccCCcchhhh
Q 005249 550 AMKLMDVAGRRKLLLTTIPVLIVSLIILVISETLQLISPVLKAGISTACVIIYFCCFVAAYGPIPNILCAEIFPTKVRGI 629 (706)
Q Consensus 550 ~~~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~ 629 (706)
.|.++||+|||++++.+..+.+++.++........ ..+++-++..++.+ ...+..+.++.|.+|++.+++
T Consensus 71 ~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~---------~l~~~r~l~Gi~~~-~~~~~~~~~~~~~~~~~~~~~ 140 (413)
T PRK15403 71 LGPLSDRIGRRPVLITGALIFTLACAATLFTTSMT---------QFLIARFIQGTSIC-FIATVGYVTVQEAFGQTKGIK 140 (413)
T ss_pred hhHHHHHcCchHHHHHHHHHHHHHHHHHHHcCCHH---------HHHHHHHHHHHHHH-HHHHHHHHHHHHhcCHHHHHH
Confidence 78999999999999998887777777666543221 12222222222211 223455677889999999999
Q ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHhhchhhHHHHHHHHHHHHHHHHHhcccCCCC
Q 005249 630 CIAICAMAYWICDIIVTYTLPVMLSSIGLAGAFGVYAVVCFISWVFVFLRVPETKG 685 (706)
Q Consensus 630 ~~~~~~~~~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~et~~ 685 (706)
++++.+....++..++|.+.+.+.+..||+..|++.+++.++++++.++.+||++.
T Consensus 141 ~~~~~~~~~~~~~~~g~~lg~~l~~~~gw~~~f~~~~~~~~i~~~~~~~~lp~~~~ 196 (413)
T PRK15403 141 LMAIITSIVLVAPIIGPLSGAALMHFVHWKVLFAIIAVMGLIAFVGLLLAMPETVK 196 (413)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCCCCcc
Confidence 99999999999999999999999888899999999999888888777777898754
No 174
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=98.89 E-value=2.5e-07 Score=101.05 Aligned_cols=156 Identities=12% Similarity=0.013 Sum_probs=113.7
Q ss_pred HHHHH-HHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhCChHHHHHHHHHHHHHHHHHHhh-----hhHHHHHHH
Q 005249 27 GAIVY-IKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVMLWS-----PNVYVLCIA 100 (706)
Q Consensus 27 ~~lp~-I~q~fGLS~s~igLl~S~~~Ig~~Igsl~~G~LaDR~GRRrvLlig~iL~aIgsll~a~a-----~s~~lLli~ 100 (706)
...|. +.+++|++..+.++......++..++.++.|++.||+|+|+.+.++.++.+++.++..+. ++++.+++.
T Consensus 236 ~~~p~~~~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~~r~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 315 (406)
T PRK15402 236 ALSPVILISGEQLSSYEYGLLQVPVFGALIAGNLTLARLTSRRPLRSLIRMGLWPMVAGLLLAALATVISSHAYLWLTAG 315 (406)
T ss_pred HHhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHH
Confidence 33454 456789999999998888888999999999999999999999999888887777766653 356667788
Q ss_pred HHHHHHHHHhHHHHHHHHHHhcCCcchhhHHhHHHHHHHHHHHHHHHHHHHHHHHhccchhhHHHHHHHHHHHHHHHHHH
Q 005249 101 RLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSWRLMLGVLSIPALLYFAFAV 180 (706)
Q Consensus 101 R~L~GIg~G~~~~~~~a~IsE~fP~k~Rg~a~Gi~~ag~~LG~alg~ll~~~l~l~~~~GWR~~FlI~ail~LV~~ll~~ 180 (706)
.++.|++.+...+......... ++++||++.++.+....+|..+|+..... .....++.......++..++.+++..
T Consensus 316 ~~~~g~g~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~g~~~~~~--l~~~~~~~~~~~~~~~~~~~~~~~~~ 392 (406)
T PRK15402 316 LSLYAFGIGLANAGLYRLTLFS-SDVSKGTVSAAMGMLSMLIFTVGIELSKH--AYLGGGNGLFNLFNLANGLLWLLLVR 392 (406)
T ss_pred HHHHHHHHHHHhhhHHHHHhhh-ccccccHHHHHHHHHHHHHHHHHHHHHHh--cccCCchHHHHHHHHHHHHHHHHHHH
Confidence 8999999998877766655444 44789999999999999999888544433 33444555544444444444444444
Q ss_pred hhccC
Q 005249 181 FFLPE 185 (706)
Q Consensus 181 lflpE 185 (706)
.+.+.
T Consensus 393 ~~~~~ 397 (406)
T PRK15402 393 IFLKD 397 (406)
T ss_pred HHhcc
Confidence 44443
No 175
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=98.89 E-value=7.6e-08 Score=100.82 Aligned_cols=178 Identities=17% Similarity=0.171 Sum_probs=132.1
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhCChHHHHHHHHHHHH
Q 005249 4 AALVAIAATIGNFLQGWDNATIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFV 83 (706)
Q Consensus 4 ~~liliil~L~~fl~gl~~~iis~~lp~I~q~fGLS~s~igLl~S~~~Ig~~Igsl~~G~LaDR~GRRrvLlig~iL~aI 83 (706)
+|+.++...+.+...+ ....++.+.|.+++.+|++.+|...+.++-.+|..+| ++.|.+.|++|++.++.+|.+...+
T Consensus 1 rW~~l~a~~~v~~~~G-t~Y~Fs~yS~~Lk~~l~~sq~~l~~l~~~~~~G~~~G-~~~G~l~d~~gp~~~l~iG~~~~~~ 78 (250)
T PF06813_consen 1 RWLSLVASIWVQLCSG-TTYTFSAYSPQLKSRLGYSQSQLNTLSTAGDIGSYFG-ILAGLLYDRFGPWVVLLIGAVLGFV 78 (250)
T ss_pred ChhhHHHHHHHHHhcC-cccchhhhhHHHHHHhCCCHHHHHHHHHHHHHHhhcc-HHHHHHHHhcchHHHHHHHHHHHHH
Confidence 3565555555555555 4456677889999999999999999999999999875 8899999999999999999999999
Q ss_pred HHHHHHhh-------hhHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCcchhhHHhHHHHHHHHHHHHHHHHHHHHHHHh
Q 005249 84 SGLVMLWS-------PNVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLL 156 (706)
Q Consensus 84 gsll~a~a-------~s~~lLli~R~L~GIg~G~~~~~~~a~IsE~fP~k~Rg~a~Gi~~ag~~LG~alg~ll~~~l~l~ 156 (706)
|..+.-.+ .++|.+.+..++.|.+.+...........+.||. +||++.|+.-...++++++-..+.... .
T Consensus 79 GY~~~~l~~~~~i~~~~~~~~~~~~~l~~~s~~~~~ta~lvt~~~NFP~-~RG~vvgilk~~~GLSaai~t~i~~~~--f 155 (250)
T PF06813_consen 79 GYGLLWLAVSGRIPSLPVWLMCLFLFLGGNSSCWFNTASLVTCVRNFPR-SRGTVVGILKGFFGLSAAIFTQIYSAF--F 155 (250)
T ss_pred HHHHHHHHHhCccCccchHHHHHHHHHHcccHHHhhhHHHHHHHHhCcc-ccCceehhhhHHHHhHHHHHHHHHHHH--c
Confidence 98777652 4678888888888888887777777777788984 799999999999999999864433333 2
Q ss_pred ccchhhHHHHHHHHHHHHHHHHHHhhccCCc
Q 005249 157 ASPSWRLMLGVLSIPALLYFAFAVFFLPESP 187 (706)
Q Consensus 157 ~~~GWR~~FlI~ail~LV~~ll~~lflpEsp 187 (706)
.+..-...+ +.+....+..++..++++..|
T Consensus 156 ~~~~~~fll-~la~~~~~v~l~~~~~vr~~~ 185 (250)
T PF06813_consen 156 GDDPSSFLL-FLAVLPAVVCLVAMFFVRPVP 185 (250)
T ss_pred CCChHHHHH-HHHHHHHHHHHHHhhheeccC
Confidence 232333333 344433333444455555443
No 176
>TIGR00901 2A0125 AmpG-related permease.
Probab=98.88 E-value=5.9e-08 Score=103.85 Aligned_cols=118 Identities=15% Similarity=0.182 Sum_probs=98.1
Q ss_pred HHHHHHHHHHHHHcCCChhHHHHHHHHHH-HHHHHHHHHHHHHhhhhCChHHHHHHHHHHHHHHHHHHhh----------
Q 005249 23 ATIAGAIVYIKKDLNLGTTVEGLVVAMSL-IGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVMLWS---------- 91 (706)
Q Consensus 23 ~iis~~lp~I~q~fGLS~s~igLl~S~~~-Ig~~Igsl~~G~LaDR~GRRrvLlig~iL~aIgsll~a~a---------- 91 (706)
.......|.+.+++|++..+.+.+.++.. ++..++.+++|++.||+|+|+.+.++.++.+++..+..+.
T Consensus 226 ~~~~~~~~~~l~~~g~~~~~~g~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (356)
T TIGR00901 226 SAATVLTTLFLLDMGFSKEEIALVAKINGLLGAILGGLIGGIIMQPLNILYALLLFGIVQALTNAGFVWLASNGHHDGIT 305 (356)
T ss_pred HHHHHHHHHHHHHcCCCHHHHHHHhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHhcCcccccc
Confidence 33444556666679999999998887765 6788999999999999999999998888888777665543
Q ss_pred -hhHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCcchhhHHhHHHHHHHH
Q 005249 92 -PNVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGS 140 (706)
Q Consensus 92 -~s~~lLli~R~L~GIg~G~~~~~~~a~IsE~fP~k~Rg~a~Gi~~ag~~ 140 (706)
++.+.++.+.++.+++.+...+...+++.|.+|+++||+.+|+.++..+
T Consensus 306 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~ 355 (356)
T TIGR00901 306 FPHLLMLFLTITLEAVTGGLGTVAFVAFLSKLSNPKFGATQMALLSSLSA 355 (356)
T ss_pred cchHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHh
Confidence 4567777888999999999999999999999999999999999887654
No 177
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=98.88 E-value=9.3e-07 Score=100.31 Aligned_cols=173 Identities=18% Similarity=0.255 Sum_probs=124.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCh-hHHHHHHHHH----HHHHHHHHHHHHHHhhhhCChHHHHHHHHHH
Q 005249 7 VAIAATIGNFLQGWDNATIAGAIVYIKKDLNLGT-TVEGLVVAMS----LIGATAITTCSGPISDWLGRRPMLILSSVLY 81 (706)
Q Consensus 7 iliil~L~~fl~gl~~~iis~~lp~I~q~fGLS~-s~igLl~S~~----~Ig~~Igsl~~G~LaDR~GRRrvLlig~iL~ 81 (706)
+....++-.+..++......+..+.....++... ...+...... .+...+.++..|.++||+|||..+.+..+..
T Consensus 23 ~~~~~fl~~fa~~l~~~~~~~~~~~~~ct~~~~~~~~~~~~~~~~~~~~~~~~~i~s~~iG~lSD~~grk~~L~~~~~~~ 102 (463)
T KOG2816|consen 23 LEPLLFLYMFSWGLSSTVMTNVILYLACTFGDDYQLENGLLLGVKQVTAGLLTLISSPLIGALSDRYGRKVVLLLPLFGT 102 (463)
T ss_pred HHHHHHHHHHHHHhcCcchhhhhhhhhcccccCccchhhhhhhHHHHhhHHHHHHHHhhhHHhhhhhhhhhhHHHHHHHH
Confidence 3344445555555555444455555555554433 2233333333 6788899999999999999999999999999
Q ss_pred HHHHHHHHhhhhHHHHHHHHHHHHH--HHHhHHHHHHHHHHhcCCcchhhHHhHHHHHHHHHHHHHHHHHHHHHHHhccc
Q 005249 82 FVSGLVMLWSPNVYVLCIARLLDGF--GVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASP 159 (706)
Q Consensus 82 aIgsll~a~a~s~~lLli~R~L~GI--g~G~~~~~~~a~IsE~fP~k~Rg~a~Gi~~ag~~LG~alg~ll~~~l~l~~~~ 159 (706)
.+..++..+.. +|.++ +.++ +.+.......+++++....++|...+|+.......+..+++...... ....
T Consensus 103 ~l~~~~~~~~~-~~~~~----~~~l~g~~~~~~s~~~a~vadis~~~~R~~~~gll~~~~~~~~~~~p~~~~~~--~~~~ 175 (463)
T KOG2816|consen 103 ILPALCLLFQG-YWFFL----LLGLSGGFSAIFSVGFAYVADISSEEERSSSIGLLSGTFGAGLVIGPALGGYL--VKFL 175 (463)
T ss_pred HHhHHHHHHHH-HHHhh----hcccccchhhhhhhhhhheeeccchhHHHHHHHHHHHHHHHHHhHHHHHHHHH--HHhc
Confidence 88888888766 33333 3333 23345567788999999999999999999999999998885554433 4446
Q ss_pred hhhHHHHHHHHHHHHHHHHHHhhccCC
Q 005249 160 SWRLMLGVLSIPALLYFAFAVFFLPES 186 (706)
Q Consensus 160 GWR~~FlI~ail~LV~~ll~~lflpEs 186 (706)
|.-..|.+..+..++..+...+++||+
T Consensus 176 ~~a~~f~ia~~~~~~~~~y~~~~l~Es 202 (463)
T KOG2816|consen 176 GIALVFLIAAASGILSLLYMLLFLPES 202 (463)
T ss_pred CchHHHHHHHHHHHHHHHHHhhccccc
Confidence 788889898888888888888889998
No 178
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.88 E-value=1.4e-07 Score=107.09 Aligned_cols=176 Identities=18% Similarity=0.146 Sum_probs=131.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhCChHHHHHHHHHHHHHH
Q 005249 6 LVAIAATIGNFLQGWDNATIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSG 85 (706)
Q Consensus 6 liliil~L~~fl~gl~~~iis~~lp~I~q~fGLS~s~igLl~S~~~Ig~~Igsl~~G~LaDR~GRRrvLlig~iL~aIgs 85 (706)
.+.+.+.++..+.+. +.+..+...+-++-|++..+..+++....+...++++++.++.||+|||+.++++..+..+..
T Consensus 272 ~i~~~v~~~qq~sGi--~ai~~Yst~i~~~aG~~~~~a~~an~~~g~v~~~~t~~~~~lid~~gRRpLll~~~~~~~~~~ 349 (485)
T KOG0569|consen 272 LIGIVVSFAQQFSGI--NAIFFYSTSIFKTAGFTPEEAQYANLGIGIVNLLSTLVSPFLIDRLGRRPLLLISLSLMAVAL 349 (485)
T ss_pred HHHHHHHHHHHhcCc--ceeHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHH
Confidence 334444444444433 444556678889999999999999999999999999999999999999999999999988888
Q ss_pred HHHHhhh----hH--HH---HHHHHHHHHHHHHhH-HHHHHHHHHhcCCcchhhHHhHHHHHHHHHHHHHHHHHHHHHHH
Q 005249 86 LVMLWSP----NV--YV---LCIARLLDGFGVGLA-VTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSL 155 (706)
Q Consensus 86 ll~a~a~----s~--~l---Lli~R~L~GIg~G~~-~~~~~a~IsE~fP~k~Rg~a~Gi~~ag~~LG~alg~ll~~~l~l 155 (706)
+++...- .. |. .+++.++..++.+.. .|..+-+.+|.+|++.|+.++++..+...++.++-.......
T Consensus 350 ~~~~~~~~l~~~~~~~~~y~~i~~~~~~~~~f~~G~gpi~~fi~aELf~~~~R~aa~s~~~~~~w~~~fiv~~~fp~l-- 427 (485)
T KOG0569|consen 350 LLMSIALFLSNSFGSWLSYLCIAAIFLFIISFAIGPGPIPWFIGAELFPQSARSAAQSVATAVNWLSNFIVGFAFPPL-- 427 (485)
T ss_pred HHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhhcCCCchhHHHHHHhCCccchHHHHHHHHHHHHHHHHHHHHHHHHH--
Confidence 7776531 11 11 233444444444432 467788999999999999999999999999888764333332
Q ss_pred hccchhhHHHHHHHHHHHHHHHHHHhhccCC
Q 005249 156 LASPSWRLMLGVLSIPALLYFAFAVFFLPES 186 (706)
Q Consensus 156 ~~~~GWR~~FlI~ail~LV~~ll~~lflpEs 186 (706)
.+..|- +.|+++.+++++.++..++++||+
T Consensus 428 ~~~~g~-~~filF~i~~~~~~i~~~~~lPET 457 (485)
T KOG0569|consen 428 QNVIGP-YVFILFVIPLAIFLIYLYRYLPET 457 (485)
T ss_pred HHHhcc-hhhHHHHHHHHHHHHHHHHhCccc
Confidence 333343 788888999999888999999999
No 179
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=98.88 E-value=7.9e-08 Score=106.76 Aligned_cols=160 Identities=16% Similarity=0.047 Sum_probs=105.1
Q ss_pred HHHHHHHHHH-HcCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhCChHHHHHHHHHHH---HHHHHHHh--hhhHHHHH
Q 005249 25 IAGAIVYIKK-DLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYF---VSGLVMLW--SPNVYVLC 98 (706)
Q Consensus 25 is~~lp~I~q-~fGLS~s~igLl~S~~~Ig~~Igsl~~G~LaDR~GRRrvLlig~iL~a---Igsll~a~--a~s~~lLl 98 (706)
+....|.+.+ .+|++..+.+++..++.++.+++.+++|+++||+++++....+.++.. ++.+++.. ..+.+...
T Consensus 270 ~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 349 (438)
T TIGR00712 270 VLDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFKGNRGATGVFFMTLVTIAVIVYWMNPAGNPLVDM 349 (438)
T ss_pred HHHhHHHHHHHccCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccCcccHHHHHHHHHHHHHHHHHHhcCCCchHHHH
Confidence 3445566555 479999999999999999999999999999999975432222322221 22222222 12334444
Q ss_pred HHHHHHHHHHHhHHHHHHHHHHhcCCcchhhHHhHHHHHHHHHH-HHHHHHHHHHHHHhccchhhHHHHHHHHHHHHHHH
Q 005249 99 IARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGG-MFLAYCMVFGMSLLASPSWRLMLGVLSIPALLYFA 177 (706)
Q Consensus 99 i~R~L~GIg~G~~~~~~~a~IsE~fP~k~Rg~a~Gi~~ag~~LG-~alg~ll~~~l~l~~~~GWR~~FlI~ail~LV~~l 177 (706)
+..++.|++.............|.+|++.|+.++|+.+....+| .++++.... ...+..||...|++.+++.++.++
T Consensus 350 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~gg~~~gp~l~G--~l~~~~g~~~~~~~~~~~~~~~~~ 427 (438)
T TIGR00712 350 ICMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVG--YTVDFFGWDGGFMVMIGGSILAVI 427 (438)
T ss_pred HHHHHHHHHHccHHHHHHHHHHHhcChhheeeehhhhchHHHhhhhhhcchhHH--HHHHhccchHHHHHHHHHHHHHHH
Confidence 44455555433322233356789999999999999998887776 456744433 334455899999888887777777
Q ss_pred HHHhhccCC
Q 005249 178 FAVFFLPES 186 (706)
Q Consensus 178 l~~lflpEs 186 (706)
+.++.++|.
T Consensus 428 ~~~~~~~~~ 436 (438)
T TIGR00712 428 LLIVVMIGE 436 (438)
T ss_pred HHHHHHhhc
Confidence 777777775
No 180
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=98.86 E-value=6.9e-08 Score=109.01 Aligned_cols=150 Identities=16% Similarity=0.063 Sum_probs=107.0
Q ss_pred HHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhCCh-------HHHHHHHHHHHHHHHHHHhhhhHHHHHHHHH
Q 005249 30 VYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRR-------PMLILSSVLYFVSGLVMLWSPNVYVLCIARL 102 (706)
Q Consensus 30 p~I~q~fGLS~s~igLl~S~~~Ig~~Igsl~~G~LaDR~GRR-------rvLlig~iL~aIgsll~a~a~s~~lLli~R~ 102 (706)
+++.+++|++..+.+.+.+++.++..++.+++|+++||+||| .++.+..++.+++.++....++.+..++..+
T Consensus 277 ~~l~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~~~r~~~~~r~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~ 356 (476)
T PLN00028 277 EYFYDRFGLSLETAGAIAASFGLMNLFARPAGGYLSDVAARRFGMRGRLWALWIVQTLGGVFCIWLGRANSLGAAIVVMI 356 (476)
T ss_pred HHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHhcCcchhHHHHHHHHHHHHHHHHHhcccchHHHHHHHHH
Confidence 345667899999999999999999999999999999999865 2333344444444444555666666666667
Q ss_pred HHHHHHHhHHHHHHHHHHhcCCcchhhHHhHHHHHHHHHHHHHHHHHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHhh
Q 005249 103 LDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSWRLMLGVLSIPALLYFAFAVFF 182 (706)
Q Consensus 103 L~GIg~G~~~~~~~a~IsE~fP~k~Rg~a~Gi~~ag~~LG~alg~ll~~~l~l~~~~GWR~~FlI~ail~LV~~ll~~lf 182 (706)
+.+++.+...+...+++.+..| +.|+.+.|+...+..+|.++++.+.. .....+|+..|++.+++.++.+++. ++
T Consensus 357 l~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~g~lg~~i~~~l~~---~~~~~~y~~~f~~~~~~~~i~~~~~-~~ 431 (476)
T PLN00028 357 LFSIFVQAACGATFGIVPFVSR-RSLGVISGLTGAGGNVGAVLTQLLFF---TGSSYSTETGISLMGVMIIACTLPV-AF 431 (476)
T ss_pred HHHHHHHHhhhhhcccCcccCh-hhchhhhhhhhccccHHHHHHHHHHH---hcCCccHhhHHHHHHHHHHHHHHHH-Hh
Confidence 7777776666666666677655 67999999998888888888754321 1223469999999888877765543 44
Q ss_pred cc
Q 005249 183 LP 184 (706)
Q Consensus 183 lp 184 (706)
++
T Consensus 432 ~~ 433 (476)
T PLN00028 432 IH 433 (476)
T ss_pred ee
Confidence 44
No 181
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=98.85 E-value=2.7e-10 Score=131.08 Aligned_cols=175 Identities=17% Similarity=0.179 Sum_probs=3.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhCChHHHHHHHHHHHHHHHHHH
Q 005249 10 AATIGNFLQGWDNATIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVML 89 (706)
Q Consensus 10 il~L~~fl~gl~~~iis~~lp~I~q~fGLS~s~igLl~S~~~Ig~~Igsl~~G~LaDR~GRRrvLlig~iL~aIgsll~a 89 (706)
++++..++.....+.+...+..+.+.|+++.++.|++.+.+-++..+..++..++..|..|-|++-+|.+++++++++++
T Consensus 7 ~~~~~~~~q~~~~g~~~~~lttiErRF~l~S~~~G~i~s~~di~~~~~~~~vsy~g~~~hrprwig~g~~~~~~g~~l~~ 86 (539)
T PF03137_consen 7 FLCLLGLFQMMVSGYVNSSLTTIERRFGLSSSQSGLISSSYDIGSLVVVLFVSYFGGRGHRPRWIGIGALLMGLGSLLFA 86 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCcceeeecHHHHHHHHHHHh
Confidence 34445555566666677778899999999999999999999999999999999999998888899999999999998887
Q ss_pred hhh--------------------------------------------------hHHHHHHHHHHHHHHHHhHHHHHHHHH
Q 005249 90 WSP--------------------------------------------------NVYVLCIARLLDGFGVGLAVTLVPLYI 119 (706)
Q Consensus 90 ~a~--------------------------------------------------s~~lLli~R~L~GIg~G~~~~~~~a~I 119 (706)
+-+ -+..++++.++.|+|....++...+|+
T Consensus 87 lPhf~~~~y~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~gq~l~GiG~~pl~tLG~tYi 166 (539)
T PF03137_consen 87 LPHFLSGPYSYEEASNSNGNSSISSNLCDSSSSSQASSDCQDCCSSSSSSLSGYFYVFILGQLLIGIGATPLYTLGITYI 166 (539)
T ss_dssp -----------------------------------------------------------------SSS------------
T ss_pred ccHhhcCCCccccccccccccccccccccccccccccCccccccccccccchHHHHHHHHHHHHHhccccCCccceeeee
Confidence 610 135667789999999999999999999
Q ss_pred HhcCCcchhhHHhHHHHHHHHHHHHHHHHHHHHHHHh------cc-------------c-hhhHHHHHHHHHHHHHHHHH
Q 005249 120 SETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLL------AS-------------P-SWRLMLGVLSIPALLYFAFA 179 (706)
Q Consensus 120 sE~fP~k~Rg~a~Gi~~ag~~LG~alg~ll~~~l~l~------~~-------------~-GWR~~FlI~ail~LV~~ll~ 179 (706)
=|..++++-+..+|+..+...+|.++|.++....... .. . .|..-|++.+++.++..+..
T Consensus 167 DDnv~~~~splYiGi~~~~~~lGPa~Gf~lg~~~L~~yvD~~~~~~~~~~i~p~dp~WvGAWWLGfli~g~~~~l~aipl 246 (539)
T PF03137_consen 167 DDNVSKKNSPLYIGILYAMSILGPALGFLLGSFCLRIYVDFPKVPPDGVGITPSDPRWVGAWWLGFLICGILLFLSAIPL 246 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ccccccccCccchhhhhHHhhccHHHHHHHHHHHHhceeCCccccccCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999997776543311 00 0 38888888888877766554
Q ss_pred HhhccC
Q 005249 180 VFFLPE 185 (706)
Q Consensus 180 ~lflpE 185 (706)
+++|+
T Consensus 247 -~~FPk 251 (539)
T PF03137_consen 247 -FFFPK 251 (539)
T ss_dssp ------
T ss_pred -HcCCc
Confidence 44443
No 182
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=98.85 E-value=3.4e-07 Score=90.50 Aligned_cols=163 Identities=26% Similarity=0.401 Sum_probs=126.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCh--hHHHHHHHHHHHHHHHHHHHHHHHhhhhCChHHHHHHHHHHHHHHHHHH
Q 005249 12 TIGNFLQGWDNATIAGAIVYIKKDLNLGT--TVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVML 89 (706)
Q Consensus 12 ~L~~fl~gl~~~iis~~lp~I~q~fGLS~--s~igLl~S~~~Ig~~Igsl~~G~LaDR~GRRrvLlig~iL~aIgsll~a 89 (706)
....+....+........+.+..+++.+. ...+++.+.+.++..++.++.|.+.||+|||+.+..+.....++.++++
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~ 87 (338)
T COG0477 8 ALAALLLGLDLGLLSPALPLLLSTLSLSSGRLLYGLLLSAFFLGYAIGSLLAGPLGDRYGRRKVLIIGLLLFLLGTLLLA 87 (338)
T ss_pred HHHHHHHHHhcchHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHhhhhhhccccccchHHHHHHHHHHHHHHHHHH
Confidence 33444444666666777788888888777 5889999999999999999999999999999888888876666667777
Q ss_pred hhhh--HHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCc-chhhHHhHHHHH-HHHHHHHHHHHHHHHHHHhccchhhHHH
Q 005249 90 WSPN--VYVLCIARLLDGFGVGLAVTLVPLYISETAPS-EIRGRLNTLPQF-TGSGGMFLAYCMVFGMSLLASPSWRLML 165 (706)
Q Consensus 90 ~a~s--~~lLli~R~L~GIg~G~~~~~~~a~IsE~fP~-k~Rg~a~Gi~~a-g~~LG~alg~ll~~~l~l~~~~GWR~~F 165 (706)
+..+ .+.+++.|++.|++.+...+....++.+++|. ++|+...++... ...+|..+++............+||..|
T Consensus 88 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (338)
T COG0477 88 LAPNVGLALLLILRLLQGLGGGGLLPVASALLSEWFPEATERGLAVGLVTLGAGALGLALGPLLAGLLLGALLWGWRAAF 167 (338)
T ss_pred hCccchHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHH
Confidence 7665 89999999999999999999999999999998 678998888888 5777888876444333222445898866
Q ss_pred HHHHHHHHH
Q 005249 166 GVLSIPALL 174 (706)
Q Consensus 166 lI~ail~LV 174 (706)
.+.......
T Consensus 168 ~~~~~~~~~ 176 (338)
T COG0477 168 LLAALLGLL 176 (338)
T ss_pred HHHHHHHHH
Confidence 555554433
No 183
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=98.84 E-value=2.2e-07 Score=102.93 Aligned_cols=164 Identities=15% Similarity=0.062 Sum_probs=132.1
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhCChHHHHHHHHHHHHHHHHHHh-hhhHH
Q 005249 17 LQGWDNATIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVMLW-SPNVY 95 (706)
Q Consensus 17 l~gl~~~iis~~lp~I~q~fGLS~s~igLl~S~~~Ig~~Igsl~~G~LaDR~GRRrvLlig~iL~aIgsll~a~-a~s~~ 95 (706)
...-....+.++-|.+.+..|++.+.++++.-+|.++..+|++++|+++|| +.|+.+.....+.++..+...+ .++.+
T Consensus 223 ~~~g~F~~ftYi~P~L~~v~g~s~~~vs~~Ll~~Gv~~~~Gn~~gGrl~dr-~~~~~l~~~~~l~a~~~l~l~~~~~~~~ 301 (394)
T COG2814 223 FMTGHFALYTYIRPFLESVAGFSVSAVSLVLLAFGIAGFIGNLLGGRLADR-GPRRALIAALLLLALALLALTFTGASPA 301 (394)
T ss_pred HHcchhhhHHhHHHHHHHccCCCHhHHHHHHHHHHHHHHHHHHHHhhhccc-cchhHHHHHHHHHHHHHHHHHHhcchHH
Confidence 334444556677799999999999999999999999999999999999999 9999999887777777776665 45666
Q ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHhcCCcchhhHHhHHHHHHHHHHHHHHHHHHHHHHHhccchhhHHHHHHHHHHHHH
Q 005249 96 VLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSWRLMLGVLSIPALLY 175 (706)
Q Consensus 96 lLli~R~L~GIg~G~~~~~~~a~IsE~fP~k~Rg~a~Gi~~ag~~LG~alg~ll~~~l~l~~~~GWR~~FlI~ail~LV~ 175 (706)
..++.-++.|++.+.........+++ .-++.+..+.+++...+++|..+|....... .++.|+....++.+++.++.
T Consensus 302 ~~~~~~~~wg~a~~~~~~~~~~~~a~-~~p~~~~~a~sl~~aa~nlgia~GA~lGG~v--~~~~g~~~~~~~~a~l~~~a 378 (394)
T COG2814 302 LALALLFLWGFAFSPALQGLQTRLAR-LAPDAADLAGSLNVAAFNLGIALGAALGGLV--LDALGYAATGWVGAALLLLA 378 (394)
T ss_pred HHHHHHHHHHHHhhhhhhHHHHHhcc-cCCCchHHHHHHHHHHHHHHHHHHHHHHHHH--HHhhchHHHHHHHHHHHHHH
Confidence 77777788888888777777777777 4457799999999999999999996655444 44589999999999988887
Q ss_pred HHHHHhhcc
Q 005249 176 FAFAVFFLP 184 (706)
Q Consensus 176 ~ll~~lflp 184 (706)
+++.+...+
T Consensus 379 ~~~~~~~~~ 387 (394)
T COG2814 379 LLLALLSAR 387 (394)
T ss_pred HHHHHHHHh
Confidence 766555443
No 184
>PRK10054 putative transporter; Provisional
Probab=98.84 E-value=1.2e-07 Score=104.29 Aligned_cols=151 Identities=11% Similarity=0.131 Sum_probs=118.9
Q ss_pred HHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhCChHHHHHHHHHHHHHHHHHHhh-hhHHHHHHHHHHHHHHHHhHH
Q 005249 34 KDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVMLWS-PNVYVLCIARLLDGFGVGLAV 112 (706)
Q Consensus 34 q~fGLS~s~igLl~S~~~Ig~~Igsl~~G~LaDR~GRRrvLlig~iL~aIgsll~a~a-~s~~lLli~R~L~GIg~G~~~ 112 (706)
++.+.+....+++.+...+......++.|.+.||+++|+.+.++.++.+++.++..++ ++.+.++++.++.|++.+...
T Consensus 237 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 316 (395)
T PRK10054 237 ADSDFAEKVVAVVLPVNAAMVVSLQYSVGRRLNAANIRPLMTAGTLCFVIGLVGFIFSGNSLLLWGMSAAVFTVGEIIYA 316 (395)
T ss_pred cccchHHHHHHHHHHhhhhheeeehhHHHHHHccCCchhHHHHHHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHH
Confidence 4556777778888888888888888899999999999999999988888888777764 577777888999999999888
Q ss_pred HHHHHHHHhcCCcchhhHHhHHHHHHHHHHHHHHHHHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHhhccCCc
Q 005249 113 TLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSWRLMLGVLSIPALLYFAFAVFFLPESP 187 (706)
Q Consensus 113 ~~~~a~IsE~fP~k~Rg~a~Gi~~ag~~LG~alg~ll~~~l~l~~~~GWR~~FlI~ail~LV~~ll~~lflpEsp 187 (706)
|....++.+..|++.|+++.+..+ ...+|.++|+...... .+..|....|++.+....+..++.++-.+|+|
T Consensus 317 p~~~~~~~~~~p~~~~~~~~~~~~-~~~~G~~~Gp~~~G~l--~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 388 (395)
T PRK10054 317 PGEYMLIDHIAPPGMKASYFSAQS-LGWLGAAINPLVSGVI--LTTLPPWSLFVILALAIVAAWLLMLKGMRARP 388 (395)
T ss_pred hhHHHHHHHhCCcccceehHhHHH-HHHHHHHHHHHHHHHH--HHHcChhhHHHHHHHHHHHHHHHHHhccccCc
Confidence 888899999999999999988654 5668888885555443 44557778888777766666656555556655
No 185
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=98.83 E-value=1.2e-07 Score=117.45 Aligned_cols=152 Identities=13% Similarity=0.074 Sum_probs=118.0
Q ss_pred HHHHHHH-HHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhCChHHHHHHHHHHHHHHHHHHhh-------------
Q 005249 26 AGAIVYI-KKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVMLWS------------- 91 (706)
Q Consensus 26 s~~lp~I-~q~fGLS~s~igLl~S~~~Ig~~Igsl~~G~LaDR~GRRrvLlig~iL~aIgsll~a~a------------- 91 (706)
...+|.+ .+.+|.+..+.+++.+++.++.++++++.|++.|+.++++.+..+.++.+++.+...+.
T Consensus 245 ~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 324 (1140)
T PRK06814 245 LSQLPLLAKETLGGDENVATLFLAVFSVGVAVGSFLASKLSEGRITLLYVPIGALLMGLFGLDLAFASSSVPAEPAQLKS 324 (1140)
T ss_pred HHHhHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCceeeeeehHHHHHHHHHHHHHHhcccccccccccccc
Confidence 3344554 45689999999999999999999999999999999888777766666666655544442
Q ss_pred -------hhHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCcchhhHHhHHHHHHHHHHHHHHHHHHHHHHHhccchhhHH
Q 005249 92 -------PNVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSWRLM 164 (706)
Q Consensus 92 -------~s~~lLli~R~L~GIg~G~~~~~~~a~IsE~fP~k~Rg~a~Gi~~ag~~LG~alg~ll~~~l~l~~~~GWR~~ 164 (706)
++.+.++++.++.|++.+...+...+++.+.+|++.||+++|+.++...+|.++++++..... ....++...
T Consensus 325 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~G~v~g~~~~~~~~~~~ig~~~~g~l~-~~~~~~~~~ 403 (1140)
T PRK06814 325 ILVFLSKRHGWRILIDLFGLAAAGGLYIVPLFAALQAWANPAHRARVIAANNVLNAAFMVAGTIILALLQ-ALGFSIPWI 403 (1140)
T ss_pred hhhhhcccccHHHHHHHHHHHHHHHHhHHHHHHHHHhhCCcccceeeeHHHHHHHHHHHHHHHHHHHHHH-HhccCHHHH
Confidence 677788888999999999999999999999999999999999999999999999876654443 123456666
Q ss_pred HHHHHHHHHHHHHH
Q 005249 165 LGVLSIPALLYFAF 178 (706)
Q Consensus 165 FlI~ail~LV~~ll 178 (706)
|++.+++.++..++
T Consensus 404 ~~~~~~~~~~~~~~ 417 (1140)
T PRK06814 404 ILFIALANLIVAIL 417 (1140)
T ss_pred HHHHHHHHHHHHHH
Confidence 66555554444433
No 186
>PRK09848 glucuronide transporter; Provisional
Probab=98.82 E-value=3.8e-07 Score=101.49 Aligned_cols=131 Identities=18% Similarity=0.253 Sum_probs=101.8
Q ss_pred HHHHHHHHHHHH-HcCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhCChHHHHHHHHHHHHHHHHHHhhh--hHHHHHH
Q 005249 23 ATIAGAIVYIKK-DLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVMLWSP--NVYVLCI 99 (706)
Q Consensus 23 ~iis~~lp~I~q-~fGLS~s~igLl~S~~~Ig~~Igsl~~G~LaDR~GRRrvLlig~iL~aIgsll~a~a~--s~~lLli 99 (706)
..+....|++.+ .+|.+....++......++.+++.++.+++.||+|+|+++.++.++.+++.++..+.+ +++.+++
T Consensus 245 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~l~~r~g~~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~ 324 (448)
T PRK09848 245 FAVSASSLFYVRYVLNDTGLFTVLVLVQNLVGTVASAPLVPGMVARIGKKNTFLIGALLGTCGYLLFFWVSVWSLPVALV 324 (448)
T ss_pred HHHhhhheeeEeeecCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCchhHHHHHH
Confidence 333444554444 4677666555555555677888999999999999999999999998888877776643 6677777
Q ss_pred HHHHHHHHHHhHHHHHHHHHHhcCCcc-------hhhHHhHHHHHHHHHHHHHHHHHHHHH
Q 005249 100 ARLLDGFGVGLAVTLVPLYISETAPSE-------IRGRLNTLPQFTGSGGMFLAYCMVFGM 153 (706)
Q Consensus 100 ~R~L~GIg~G~~~~~~~a~IsE~fP~k-------~Rg~a~Gi~~ag~~LG~alg~ll~~~l 153 (706)
..++.|+|.+...+...++.+|..|.+ ++|..+|+.+.+..+|.+++..+....
T Consensus 325 ~~~l~g~G~~~~~~~~~al~~~~~~~~~~~~g~r~~G~~~~~~~~~~klg~aig~~i~g~~ 385 (448)
T PRK09848 325 ALAIASIGQGVTMTVMWALEADTVEYGEYLTGVRIEGLTYSLFSFTRKCGQAIGGSIPAFI 385 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhhHHhhCccchhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 788999999999999999999888754 358899999999999999986665443
No 187
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=98.81 E-value=1e-07 Score=103.50 Aligned_cols=126 Identities=13% Similarity=0.155 Sum_probs=91.7
Q ss_pred HHHHHhhhcchHHHHhHHHHHHHHHHHHHHHhhhhhhhhhHHHHHHHHHHHHHHHHhhcccccchhhhhcccCCcchhhh
Q 005249 550 AMKLMDVAGRRKLLLTTIPVLIVSLIILVISETLQLISPVLKAGISTACVIIYFCCFVAAYGPIPNILCAEIFPTKVRGI 629 (706)
Q Consensus 550 ~~~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~ 629 (706)
.|+++||+|||+.++.+..+.+++.++....... +..++..++..++.+ ...+....++.|.++.+.++.
T Consensus 63 ~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~---------~~l~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~ 132 (394)
T PRK11652 63 YGPLSDRVGRRPVILVGMSIFILGTLVALFAHSL---------TVLIAASAIQGLGTG-VGGVMARTLPRDLYEGTQLRH 132 (394)
T ss_pred hhhHHHhcCChHHHHHHHHHHHHHHHHHHHHccH---------HHHHHHHHHHHhhhh-HHHHHHHHHHHHhcCHHHHHH
Confidence 8999999999999998887777776665443211 111111122111111 223455567788899889999
Q ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHhhchhhHHHHHHHHHHHHHHHHHhcccCCCC
Q 005249 630 CIAICAMAYWICDIIVTYTLPVMLSSIGLAGAFGVYAVVCFISWVFVFLRVPETKG 685 (706)
Q Consensus 630 ~~~~~~~~~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~et~~ 685 (706)
+.++.++...++..++|.+.+.+.+..||+.+|.+.++++++..++..++.||++.
T Consensus 133 ~~~~~~~~~~~~~~~g~~i~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~ 188 (394)
T PRK11652 133 ANSLLNMGILVSPLLAPLIGGLLTTLFGWRACYLFLLLLGAGVTFSMARWMPETRP 188 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccChHHHHHHHHHHHHHHHHHHHHhCCccCc
Confidence 99999999999999999999999888999999999888877776666667888654
No 188
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=98.80 E-value=5.3e-08 Score=104.52 Aligned_cols=125 Identities=18% Similarity=0.225 Sum_probs=96.8
Q ss_pred HHHHHhhhcchHHHHhHHHHHHHHHHHHHHHhhhhhhhhhHHHHHHHHHHHHHHHHhhcccccchhhhhcccCCcchhhh
Q 005249 550 AMKLMDVAGRRKLLLTTIPVLIVSLIILVISETLQLISPVLKAGISTACVIIYFCCFVAAYGPIPNILCAEIFPTKVRGI 629 (706)
Q Consensus 550 ~~~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~ 629 (706)
.++++||+|||+.+..+..+.+++.+.+....... ...++.++...+ .....+....++.|.+|++.|++
T Consensus 46 ~g~l~d~~g~~~~~~~~~~~~~i~~~~~~~~~~~~---------~~~~~~~l~g~~-~~~~~~~~~~~~~~~~~~~~~~~ 115 (377)
T PRK11102 46 YGPMADSFGRKPVILGGTLVFALAAVACALAQTID---------QLIYMRFLHGLA-AAAASVVINALMRDMFPKEEFSR 115 (377)
T ss_pred hchHHhhcCChHHHHHHHHHHHHHHHHHHHHccHH---------HHHHHHHHHHHH-HHHHHHHHHHHHHHhcCHHHHHH
Confidence 78999999999999999888888877766542211 222222222222 22234556678899999999999
Q ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHhhchhhHHHHHHHHHHHHHHHHHhcccCCC
Q 005249 630 CIAICAMAYWICDIIVTYTLPVMLSSIGLAGAFGVYAVVCFISWVFVFLRVPETK 684 (706)
Q Consensus 630 ~~~~~~~~~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~et~ 684 (706)
+.++.+....++..+++.+.+.+.+..||+..|.+.++++++..++.++++||++
T Consensus 116 ~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (377)
T PRK11102 116 MMSFVTLVMTIAPLLAPIIGGWLLVWFSWHAIFWVLALAAILAAALVFFFIPETL 170 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHhCCccC
Confidence 9999999999999999999999999999999999999888888877777777764
No 189
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=98.80 E-value=5.5e-07 Score=98.97 Aligned_cols=143 Identities=12% Similarity=0.065 Sum_probs=109.1
Q ss_pred HHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhCChHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHH
Q 005249 30 VYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVMLWSPNVYVLCIARLLDGFGVG 109 (706)
Q Consensus 30 p~I~q~fGLS~s~igLl~S~~~Ig~~Igsl~~G~LaDR~GRRrvLlig~iL~aIgsll~a~a~s~~lLli~R~L~GIg~G 109 (706)
+++.+.+|.+..+.|++.+...++.++++++.+++.||+++|+++..+. +.++..++.++.++++.+++..++.|++.+
T Consensus 230 ~~~~~~lg~s~~~~G~~~~~~~~g~i~g~~~~~~l~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~G~~~g 308 (393)
T PRK11195 230 AWAPVALGITLNQPAYLQAVVAIGIAVGAGAAARLVTLETVLRVLPAGI-LMGLVVLLMALQHSLLPAYPLLILIGALGG 308 (393)
T ss_pred HHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchHHHHH-HHHHHHHHHHHHhHHHHHHHHHHHHHHhhh
Confidence 3456678999999999999999999999999999999999998888775 445555555667777777788889999999
Q ss_pred hHHHHHHHHHHhcCCcch-hhHHhHHHHHHHHHHHHHHHHHHHHHHHhccchhhHHHHHHHHHHHHHH
Q 005249 110 LAVTLVPLYISETAPSEI-RGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSWRLMLGVLSIPALLYF 176 (706)
Q Consensus 110 ~~~~~~~a~IsE~fP~k~-Rg~a~Gi~~ag~~LG~alg~ll~~~l~l~~~~GWR~~FlI~ail~LV~~ 176 (706)
...+...+.+.+..|++. +|++.++.+....+|..++..+.... ...|-+..+++.++..++.+
T Consensus 309 ~~~~~~~~~~q~~~~~~~~~g~~~a~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~ 373 (393)
T PRK11195 309 FFVVPMNALLQHRGHVLVGAGHSIAVQNFNENLAMLLMLGLYSLL---VKLGVPVVAVIVGFGLLVAL 373 (393)
T ss_pred hhhhhHHHHHHhhCcccccchhHHHHHhHHHHHHHHHHHHHHHHH---HHcCCCHHHHHHHHHHHHHH
Confidence 888888888888766654 79999999999999999985554433 23344444444333333333
No 190
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=98.78 E-value=1e-06 Score=96.89 Aligned_cols=145 Identities=13% Similarity=-0.028 Sum_probs=110.7
Q ss_pred HHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhCChHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHH
Q 005249 29 IVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVMLWSPNVYVLCIARLLDGFGV 108 (706)
Q Consensus 29 lp~I~q~fGLS~s~igLl~S~~~Ig~~Igsl~~G~LaDR~GRRrvLlig~iL~aIgsll~a~a~s~~lLli~R~L~GIg~ 108 (706)
.|.+.+++|++..+.+++.+.+.++..++.++.+++.||.+++..+..+.+...+..++....++.+.+.+..++.|++.
T Consensus 240 ~p~~~~~~g~s~~~~g~~~~~~~~~~iig~~~~~~l~~r~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~G~~~ 319 (394)
T PRK10213 240 RPVYMNLAGFGVDGLTLVLLSFGIASFVGTSLSSFILKRSVKLALAGAPLVLAVSALVLTLWGSDKIVATGVAIIWGLTF 319 (394)
T ss_pred HHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHH
Confidence 47777889999999999999999999999999999999965443344333334444455456677888888899999999
Q ss_pred HhHHHHHHHHHHhcCCcchhhHHhHHHHHHHHHHHHHHHHHHHHHHHhccchhhHHHHHHHHHHHHHH
Q 005249 109 GLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSWRLMLGVLSIPALLYF 176 (706)
Q Consensus 109 G~~~~~~~a~IsE~fP~k~Rg~a~Gi~~ag~~LG~alg~ll~~~l~l~~~~GWR~~FlI~ail~LV~~ 176 (706)
+...+...+++.+..| ++++++.++......+|..+|+.+.... .+..|++..++..+++.++..
T Consensus 320 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~lg~~~G~~l~G~l--~~~~g~~~~~~~~~~~~~~~~ 384 (394)
T PRK10213 320 ALVPVGWSTWITRSLA-DQAEKAGSIQVAVIQLANTCGAAIGGYA--LDNIGLTSPLMLSGTLMLLTA 384 (394)
T ss_pred HhhhHHHHHHHHHHCc-ccHHHHHHHHHHHHHHHHHHHHHHHHHH--HhccChhhHHHHHHHHHHHHH
Confidence 9999988889998887 4567888888888889999985555444 455688888877776555444
No 191
>PRK10091 MFS transport protein AraJ; Provisional
Probab=98.78 E-value=8.4e-07 Score=96.58 Aligned_cols=149 Identities=9% Similarity=0.016 Sum_probs=107.0
Q ss_pred HHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhCChHHHHHHHHHHHHHHHHHHh-hhhHHHHHHHHHHHHH
Q 005249 28 AIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVMLW-SPNVYVLCIARLLDGF 106 (706)
Q Consensus 28 ~lp~I~q~fGLS~s~igLl~S~~~Ig~~Igsl~~G~LaDR~GRRrvLlig~iL~aIgsll~a~-a~s~~lLli~R~L~GI 106 (706)
..|++.+.+|.+..+.+++.+...++..++.++.|++.||+|+|+.+..+.++.+++.++... .++.+..+++.++.++
T Consensus 222 ~~~~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~~r~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 301 (382)
T PRK10091 222 IKPYMMFISGFSETSMTFIMMLVGLGMVLGNLLSGRLSGRYSPLRIAAVTDFIIVLALLMLFFFGGMKTASLIFAFICCA 301 (382)
T ss_pred HHHHHHHhcCCCHHHHHHHHHHHHHHHHHHhHHHheeccccCchhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 345666778999999999999999999999999999999999999999888888887765543 4556666677777777
Q ss_pred HHHhHHHHHHH-HHHhcCCcchhhHHhHHHHHHHHHHHHHHHHHHHHHHHhccchhhHHHHHHHHHHHHHHHHH
Q 005249 107 GVGLAVTLVPL-YISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSWRLMLGVLSIPALLYFAFA 179 (706)
Q Consensus 107 g~G~~~~~~~a-~IsE~fP~k~Rg~a~Gi~~ag~~LG~alg~ll~~~l~l~~~~GWR~~FlI~ail~LV~~ll~ 179 (706)
+.....+.... ...+..+++.++.+ ..+....+|.++|+....... ....+|+..+.+.++++++.....
T Consensus 302 g~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~g~~~Gp~~~G~l~-~~~~~~~~~~~~~~~~~~~~~~~~ 372 (382)
T PRK10091 302 GLFALSAPLQILLLQNAKGGELLGAA--GGQIAFNLGSAIGAYCGGMML-TLGLAYNYVALPAALLSFAAMSSL 372 (382)
T ss_pred HHHhhhHHHHHHHHHhCCcchHHHHH--HHHHHHHHHHHHHHHHhHHHH-HcccCcchHHHHHHHHHHHHHHHH
Confidence 76555444443 44444555555544 346677889999865554332 224578888888776666544433
No 192
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=98.77 E-value=5.2e-06 Score=92.58 Aligned_cols=161 Identities=15% Similarity=0.192 Sum_probs=127.0
Q ss_pred HHHHHHHHHH-cCCChhHHH-HHHHHHHHHHHHHHHHHHHHhhhhCChHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHH
Q 005249 26 AGAIVYIKKD-LNLGTTVEG-LVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVMLWSPNVYVLCIARLL 103 (706)
Q Consensus 26 s~~lp~I~q~-fGLS~s~ig-Ll~S~~~Ig~~Igsl~~G~LaDR~GRRrvLlig~iL~aIgsll~a~a~s~~lLli~R~L 103 (706)
+...|++... .|++..|+. -+.-...-.+....++...+.|..+.|++++++.+...+..++..+.++...+-+..++
T Consensus 24 Pfl~~yL~~~~kn~T~~qv~~~i~Pv~tYSyl~~l~~vflltd~l~Ykpviil~~~~~i~t~~lll~~~sv~~mq~~q~~ 103 (412)
T PF01770_consen 24 PFLTPYLTGPDKNFTEEQVNNEIYPVWTYSYLAFLLPVFLLTDYLRYKPVIILQALSYIITWLLLLFGTSVLAMQLMQFF 103 (412)
T ss_pred ccchHHHcCCccCCCHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHCcHHHHHHHHHH
Confidence 3345666664 788887765 34555556778888899999999999999999999999999999999999999999999
Q ss_pred HHHHHHhHHHHHHHHHHhcCCcchhhHHhHHHHHHHHHHHHHHHHHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHhhc
Q 005249 104 DGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSWRLMLGVLSIPALLYFAFAVFFL 183 (706)
Q Consensus 104 ~GIg~G~~~~~~~a~IsE~fP~k~Rg~a~Gi~~ag~~LG~alg~ll~~~l~l~~~~GWR~~FlI~ail~LV~~ll~~lfl 183 (706)
.|++.+.- .+.++|+-...|+++-.++.+...++.-+|-+++.+++-.+......+++.+.++......+++ +..+++
T Consensus 104 yg~~~a~e-vay~sYiys~v~~~~yq~vts~~raa~l~g~~~s~~lgQllvs~~~~sy~~L~~isl~~~~~a~-~~~~fL 181 (412)
T PF01770_consen 104 YGLATAAE-VAYYSYIYSVVDKEHYQKVTSYTRAATLVGRFISSLLGQLLVSFGGVSYFQLNYISLASVSLAL-LIALFL 181 (412)
T ss_pred HHHHHHHH-HHHHHHheeecCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHH-HHHHHc
Confidence 99988874 7788999999999988999999999998888888777665555556677777666555444433 445777
Q ss_pred cCCch
Q 005249 184 PESPR 188 (706)
Q Consensus 184 pEsp~ 188 (706)
|..++
T Consensus 182 P~~~~ 186 (412)
T PF01770_consen 182 PMPKR 186 (412)
T ss_pred CCCCc
Confidence 77643
No 193
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=98.77 E-value=2.2e-07 Score=98.17 Aligned_cols=152 Identities=20% Similarity=0.114 Sum_probs=103.5
Q ss_pred HHHHHHHHHHHHHHHHHHHH-HHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhCC-hHHHH-HH-HHHHHHHHHH
Q 005249 12 TIGNFLQGWDNATIAGAIVY-IKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGR-RPMLI-LS-SVLYFVSGLV 87 (706)
Q Consensus 12 ~L~~fl~gl~~~iis~~lp~-I~q~fGLS~s~igLl~S~~~Ig~~Igsl~~G~LaDR~GR-RrvLl-ig-~iL~aIgsll 87 (706)
.+..++.......+....|. +.+.+|.+..+.+++.+.+.++..++.++.|++.||+++ |+... .. ..+..++..+
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~ 301 (379)
T TIGR00881 222 SLGYVFVYVVRTGILDWSPLYLTQEKGFSKEKASWAFTLYELGGLVGTLLAGWLSDKLFNGRRGPLAVFFMALIIVSLLV 301 (379)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHcchhHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHH
Confidence 33334444444444444554 456789999999999999999999999999999998643 33222 21 1222222222
Q ss_pred HHh--hhhHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCcchhhHHhHHHHHHHHHHHHHHHHHHHHHHHhccchhhHHH
Q 005249 88 MLW--SPNVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSWRLML 165 (706)
Q Consensus 88 ~a~--a~s~~lLli~R~L~GIg~G~~~~~~~a~IsE~fP~k~Rg~a~Gi~~ag~~LG~alg~ll~~~l~l~~~~GWR~~F 165 (706)
... ..+...++++.++.|+......+....++.|.+|+++|+++.|+.+....+|.++++.+... ..+..||+..|
T Consensus 302 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~--l~~~~g~~~~f 379 (379)
T TIGR00881 302 YWLNPAANPLMDLICLFALGFLVYGPQMLIGVIASELAPKKAAGTAAGFVGFFAYLGGILAGLPLGY--LADGFGWAGAF 379 (379)
T ss_pred HhcCcchhHHHHHHHHHHHHHHHhhhhHHHHHHHHHhcCcchhHHHHHHHHHhhhhhhhhhhhhHHH--HHHhhcccccC
Confidence 222 23455566677778876666666677889999999999999999999999999998555433 34556777643
No 194
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=98.75 E-value=1.9e-07 Score=99.48 Aligned_cols=123 Identities=15% Similarity=0.138 Sum_probs=85.7
Q ss_pred HHHHHhhhcchHHHHhHHHHHHHHHHHHHHHh-hhhhhhhhHHHHHHHHHHHHHHHHhhcccccchhhhhcccCCcchhh
Q 005249 550 AMKLMDVAGRRKLLLTTIPVLIVSLIILVISE-TLQLISPVLKAGISTACVIIYFCCFVAAYGPIPNILCAEIFPTKVRG 628 (706)
Q Consensus 550 ~~~l~d~~grr~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~ 628 (706)
.++++||+|||+.++++..+..++.+++.... ... ...+..++... +.+..+....+++|.+|++.|+
T Consensus 57 ~g~l~dr~g~r~~~~~~~~~~~i~~~~~~~~~~~~~---------~~~~~~~~~g~--~~~~~~~~~~~~~~~~~~~~r~ 125 (366)
T TIGR00886 57 LGFLVDKFGPRYTTTLSLLLLAIPCLWAGLAVQSYS---------VLLLLRLFIGI--AGGSFASCMPWISFFFPKKIQG 125 (366)
T ss_pred HHHHHHHhCchHHHHHHHHHHHHHHHHHHHHhhhHH---------HHHHHHHHHHH--hchhhHhHHHHHHHhcCHhhhh
Confidence 89999999999999999888888877766543 211 11122222222 2222344567889999999999
Q ss_pred hHHHHHHHHHHHHHHHHHhHHHHHHHh----------hchhhHH-HHHHHHHHHHHHHHHhcccCC
Q 005249 629 ICIAICAMAYWICDIIVTYTLPVMLSS----------IGLAGAF-GVYAVVCFISWVFVFLRVPET 683 (706)
Q Consensus 629 ~~~~~~~~~~~~~~~i~~~~~~~~~~~----------~g~~~~~-~~~~~~~~~~~~~~~~~~~et 683 (706)
.+.++......+|..+++.+.+.+... .+|+..| ++.+++.++..++.+...+|+
T Consensus 126 ~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (366)
T TIGR00886 126 TALGLAAGWGNMGGGVAQFVMPPIIGSLIFGAGLPAHLAWGWAFVIVPAGILLLPALLIFFVGADT 191 (366)
T ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHHHHHhcccccccccccchhHHHHHHHHHHHHHHHHHhcccC
Confidence 999999988889999888888877653 3788888 444655555555555555554
No 195
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=98.75 E-value=3e-07 Score=101.80 Aligned_cols=179 Identities=20% Similarity=0.231 Sum_probs=141.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhCChHHHHHHHHHHHHH
Q 005249 5 ALVAIAATIGNFLQGWDNATIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVS 84 (706)
Q Consensus 5 ~liliil~L~~fl~gl~~~iis~~lp~I~q~fGLS~s~igLl~S~~~Ig~~Igsl~~G~LaDR~GRRrvLlig~iL~aIg 84 (706)
-+..+++.-..+.++.+... .....+-..++|++..+..++.....+.++++++++|+|.||+|.|+++.++.+++.+.
T Consensus 253 ~i~~FLiA~~~~~DGv~til-~~~~~fg~~~~gls~~~lll~g~~~~vvA~lg~ii~g~Ld~rfg~k~vl~~~lvi~~~~ 331 (438)
T COG2270 253 NLVLFLIARFFYIDGVNTIL-AMGGVFGAADLGLSSTELLLIGIALSVVAALGAIIAGFLDERFGSKPVLMIGLVILSIA 331 (438)
T ss_pred chHHHHHHHHHHHhhHHHHH-HHHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCceeehHHHHHHHHH
Confidence 34455555555556655433 33334455599999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhhhHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCcchhhHHhHHHHHHHHHHHHHHHHHHHHHHHhccchhhHH
Q 005249 85 GLVMLWSPNVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSWRLM 164 (706)
Q Consensus 85 sll~a~a~s~~lLli~R~L~GIg~G~~~~~~~a~IsE~fP~k~Rg~a~Gi~~ag~~LG~alg~ll~~~l~l~~~~GWR~~ 164 (706)
++...+...-..+.++..+.|.+.|..++..-+|..+..|+++-++.+|+++.....++.+|+........... +-|..
T Consensus 332 ~~~~~~~~~~~~f~i~gll~g~s~G~~qA~SRSy~~~lvp~~k~~~fFglyaltgra~S~~gp~lv~v~t~iTg-~~r~g 410 (438)
T COG2270 332 ALYLIFLEGELDFWILGLLVGTSLGGAQASSRSYLARLVPKGKEGRFFGLYALTGRAASFLGPFLVAVITQITG-SSRAG 410 (438)
T ss_pred HHHHHHccccHHHHHHHHHHHHhcchHHHHHHHHHHHhCCCccccceeehhhhhhhHHHHHHHHHHHHHHHHhc-chhhH
Confidence 88888877777788888999999999999999999999999999999999999999999999777655543332 45666
Q ss_pred HHHHHHHHHHHHHHHHhhccCC
Q 005249 165 LGVLSIPALLYFAFAVFFLPES 186 (706)
Q Consensus 165 FlI~ail~LV~~ll~~lflpEs 186 (706)
+....++.++.+ +.++++|+.
T Consensus 411 ~~~i~vll~iGl-~~L~~v~~~ 431 (438)
T COG2270 411 VLSIIVLLLIGL-LLLLRVKVP 431 (438)
T ss_pred HHHHHHHHHhhH-hhEEeecCC
Confidence 655555544433 334555554
No 196
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=98.71 E-value=4.1e-07 Score=95.45 Aligned_cols=127 Identities=26% Similarity=0.322 Sum_probs=108.8
Q ss_pred HHHHHHHHHHHH-HHHcCCC-hhHHHHHHHHHHHHHHHHHHHHHHHhhhhCChHHHHHHHHHHHHHHHHHHhhh---hHH
Q 005249 21 DNATIAGAIVYI-KKDLNLG-TTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVMLWSP---NVY 95 (706)
Q Consensus 21 ~~~iis~~lp~I-~q~fGLS-~s~igLl~S~~~Ig~~Igsl~~G~LaDR~GRRrvLlig~iL~aIgsll~a~a~---s~~ 95 (706)
.........|.+ .+.+|.+ ..+.+.+.++..++..++.++.|++.||+|+|+.+.+......++.+...+.. +..
T Consensus 221 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (352)
T PF07690_consen 221 VFSGFSFFLPLYLQEVLGFSGPSQAGLLFSIFGIVGIIGSLLAGRLSDRFGRRRRLLIAILLLILGALGLLLLPFSSSPV 300 (352)
T ss_dssp HHHHHHHHHHHHCCHHHHCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHCCSHHHCHHH
T ss_pred HHHHhhcccchhhhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHhhhHH
Confidence 333355666765 8899999 79999999999999999999999999999998888877777777776666543 457
Q ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHhcCCcchhhHHhHHHHHHHHHHHHHHH
Q 005249 96 VLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAY 147 (706)
Q Consensus 96 lLli~R~L~GIg~G~~~~~~~a~IsE~fP~k~Rg~a~Gi~~ag~~LG~alg~ 147 (706)
..++..++.|++.+...+....++.+.+|+++|+++.|+.+...++|.+++|
T Consensus 301 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~igP 352 (352)
T PF07690_consen 301 WLIIALFLIGFGFGIVFPILFSLIQELVPPEYRGTAFGLFNSIGSLGGIIGP 352 (352)
T ss_dssp HHHHHHHHHHHHHHHHCHHHHHHHHCCCHTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHCC
Confidence 7777889999999999999999999999999999999999999999999874
No 197
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=98.71 E-value=9.1e-07 Score=97.48 Aligned_cols=152 Identities=13% Similarity=-0.014 Sum_probs=114.1
Q ss_pred HHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhh-hhCChHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHH
Q 005249 27 GAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISD-WLGRRPMLILSSVLYFVSGLVMLWSPNVYVLCIARLLDG 105 (706)
Q Consensus 27 ~~lp~I~q~fGLS~s~igLl~S~~~Ig~~Igsl~~G~LaD-R~GRRrvLlig~iL~aIgsll~a~a~s~~lLli~R~L~G 105 (706)
...|.+.++.+.++.+.+++.++..++..++..+.+.+.| |++.++.+..+.++.+++.++.+++++++.+++..++.|
T Consensus 229 ~~~p~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~ 308 (400)
T PRK11646 229 LMLPIMVNDIAGSPSAVKWMYAIEACLSLTLLYPIARWSEKRFRLEHRLMAGLLIMSLSMFPIGMVSNLQQLFTLICLFY 308 (400)
T ss_pred HhhhhhHHhhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHH
Confidence 4567766776667788888888877777666655666655 577777778888888888888888888888888888899
Q ss_pred HHHHhHHHHHHHHHHhcCCcchhhHHhHHHHHHHHHHHHHHHHHHHHHHHhc-cch-hhHHHHHHHHHHHHHHHH
Q 005249 106 FGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLA-SPS-WRLMLGVLSIPALLYFAF 178 (706)
Q Consensus 106 Ig~G~~~~~~~a~IsE~fP~k~Rg~a~Gi~~ag~~LG~alg~ll~~~l~l~~-~~G-WR~~FlI~ail~LV~~ll 178 (706)
++.+...+...+++.+..|+++||+++|+.+....+|..+|+.+........ ..+ -...+++.++++++.++.
T Consensus 309 ~g~~~~~p~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~ig~~l~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (400)
T PRK11646 309 IGSIIAEPARETLSASLADARARGSYMGFSRLGLALGGAIGYIGGGWLFDLGKALNQPELPWMMLGIIGLITLLA 383 (400)
T ss_pred HHHHHHHccHHHHHHhcCCcccchhhhhHHHHHHHHHHHhcccchHHHHHHHhhcCCcchHHHHHHHHHHHHHHH
Confidence 9999888888999999999999999999999999999999976665554321 112 244555555555554433
No 198
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=98.70 E-value=6.5e-07 Score=99.94 Aligned_cols=170 Identities=14% Similarity=0.201 Sum_probs=131.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhCChHHHHHHHHHHHHHHHHHHhhhhH
Q 005249 15 NFLQGWDNATIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVMLWSPNV 94 (706)
Q Consensus 15 ~fl~gl~~~iis~~lp~I~q~fGLS~s~igLl~S~~~Ig~~Igsl~~G~LaDR~GRRrvLlig~iL~aIgsll~a~a~s~ 94 (706)
.+-+.+++. ++.+...+-++-+.+...+|.+.++..+.-++.-.+..++.+|+|.|+.++++.+++.+=.++++++++.
T Consensus 234 ~~Y~vfdqq-f~~y~~~~f~~~~~g~~~~G~l~s~~v~~E~~~m~~~p~li~rig~k~~Lllag~i~~iRi~~~~~~~~~ 312 (412)
T PF01306_consen 234 AIYDVFDQQ-FPIYFASFFQSAGQGNQMYGYLWSVQVFLEALMMFFSPWLINRIGAKNLLLLAGVIMAIRIIGSGFATNP 312 (412)
T ss_dssp HHHHHHHHH-HHHHHHHTSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHT--SH
T ss_pred HHHHHHHHH-HHHHHHHHhcccccChhHHhHHHHHHHHHHHHHHHHHHHHHHhcChHhHHHHHHHHHHHHHHHHhhhcch
Confidence 344445554 3332222222334455789999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHhcCCcchhhHHhHHH-HHHHHHHHHHHHHHHHHHHHhccchhhHHHHHHHHHHH
Q 005249 95 YVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLP-QFTGSGGMFLAYCMVFGMSLLASPSWRLMLGVLSIPAL 173 (706)
Q Consensus 95 ~lLli~R~L~GIg~G~~~~~~~a~IsE~fP~k~Rg~a~Gi~-~ag~~LG~alg~ll~~~l~l~~~~GWR~~FlI~ail~L 173 (706)
+.+.+.+.+.|+-.+........|+++.+|++..++...+. +.+.++|.++.+.+. ....+..|.+..|++.+.+.+
T Consensus 313 ~~i~~~klLH~~e~~l~lva~fkYI~~~fd~rlsAt~y~v~~~~~~~~~~~i~s~~~--G~lyd~~G~~~tylimg~iv~ 390 (412)
T PF01306_consen 313 WVISLIKLLHALEFPLLLVAAFKYITAHFDKRLSATLYLVGFQFAKQIGIIILSPLA--GYLYDRIGFQHTYLIMGLIVL 390 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHS-GGGHHHHHHHHHTTTHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhHHHHHHHHHHHHHHHHHHHHHhhhH--HhhHhhcCcHHHHHHHHHHHH
Confidence 99999999999999999999999999999999877777773 677778887764443 444567799999999999888
Q ss_pred HHHHHHHhhccCCc
Q 005249 174 LYFAFAVFFLPESP 187 (706)
Q Consensus 174 V~~ll~~lflpEsp 187 (706)
+..++..+.+++.+
T Consensus 391 ~~~li~~f~l~~~~ 404 (412)
T PF01306_consen 391 PFTLISAFTLKKDK 404 (412)
T ss_dssp HHHHHHHHHS--SS
T ss_pred HHHHHheeeecCCC
Confidence 88888888887664
No 199
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=98.70 E-value=2.2e-06 Score=93.93 Aligned_cols=144 Identities=18% Similarity=0.151 Sum_probs=100.2
Q ss_pred HHHHHHcCCChhHHHHHHHHHH-HHHHHHHHHHHHHhhhhCChHHHHHHHHHHHHHHHHH---Hhh-hhHHHHHHHH---
Q 005249 30 VYIKKDLNLGTTVEGLVVAMSL-IGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVM---LWS-PNVYVLCIAR--- 101 (706)
Q Consensus 30 p~I~q~fGLS~s~igLl~S~~~-Ig~~Igsl~~G~LaDR~GRRrvLlig~iL~aIgsll~---a~a-~s~~lLli~R--- 101 (706)
+.+.+++|++..+.+++.+... ++.+++.+++|++.||+|+|+.+.++.++..+..+.. ++. ++.+.++++-
T Consensus 234 ~~l~~~~G~~~~~~g~~~~~~~~~~~i~g~~~~g~l~~r~g~~~~l~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~ 313 (402)
T PRK11902 234 TFLIRGAGFSAGEVGIVNKTLGLAATIVGALAGGTLMVRLGLYRSLMLFGVLQAVSNLGYWVLAVTPKHLWTMALAIGIE 313 (402)
T ss_pred HHHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHH
Confidence 5577789999999999886654 5688999999999999999998887777666554433 343 3555555544
Q ss_pred -HHHHHHHHhHHHHHHHHHHhcCCcchhhHHhHHHHHHHHHHHHHHHHHHHHHHHhccchhhHHHHHHHHHHHHHHHHH
Q 005249 102 -LLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSWRLMLGVLSIPALLYFAFA 179 (706)
Q Consensus 102 -~L~GIg~G~~~~~~~a~IsE~fP~k~Rg~a~Gi~~ag~~LG~alg~ll~~~l~l~~~~GWR~~FlI~ail~LV~~ll~ 179 (706)
++.|++.+...+....++.+.+|.+.++ +.+...++|.+++... .....+..||+..|.+.++++++.+++.
T Consensus 314 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~l~~~~~~~~--~G~l~~~~G~~~~f~~~~~~~~~~~~~~ 386 (402)
T PRK11902 314 NLCGGMGTAAFVALLMALCNRSFSATQYA----LLSALASVGRVYVGPT--SGYLVEAYGWPGFYLMTVVIALPGLALL 386 (402)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCcHHHHH----HHHHHHHHHHHHHHHH--HHHHHHHhChHHHHHHHHHHHHHHHHHH
Confidence 4556667777777778888888866554 4444445566544322 3334456799999998888887765443
No 200
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=98.70 E-value=1.6e-06 Score=94.62 Aligned_cols=160 Identities=16% Similarity=0.156 Sum_probs=112.2
Q ss_pred HHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhCChHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHH
Q 005249 26 AGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVMLWSPNVYVLCIARLLDG 105 (706)
Q Consensus 26 s~~lp~I~q~fGLS~s~igLl~S~~~Ig~~Igsl~~G~LaDR~GRRrvLlig~iL~aIgsll~a~a~s~~lLli~R~L~G 105 (706)
+|+.-.+-+++|++..+++.+....+...++...+.|.++||+|||+.-++..++.+++++.. ..++++.++++|++.|
T Consensus 54 GpY~Y~LY~~yg~~~~qIa~Lf~~Gf~Ss~i~g~~~G~laD~~Grk~~cl~~cily~~scl~k-~~~~~~~L~~GRvlgG 132 (354)
T PF05631_consen 54 GPYLYALYESYGFSEHQIAILFVAGFASSAIFGTFVGSLADRYGRKKACLLFCILYSLSCLTK-HSSNYPVLLLGRVLGG 132 (354)
T ss_pred cchhHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHH-hccccHHHHHHHHHHH
Confidence 344334557899999999999999999999999999999999999999999999999998644 4688999999999999
Q ss_pred HHHHhHHHHHHHHHH-hc----CCcchhhHHhHHHH-HHHHHHHHHHHHHHHHHHHhccchhhHHHHHHHHHHHHHHHHH
Q 005249 106 FGVGLAVTLVPLYIS-ET----APSEIRGRLNTLPQ-FTGSGGMFLAYCMVFGMSLLASPSWRLMLGVLSIPALLYFAFA 179 (706)
Q Consensus 106 Ig~G~~~~~~~a~Is-E~----fP~k~Rg~a~Gi~~-ag~~LG~alg~ll~~~l~l~~~~GWR~~FlI~ail~LV~~ll~ 179 (706)
++....+.+--+++. |. +|++..+...+... ..+++-.+++.++.-........|-..+|.....+.++..++.
T Consensus 133 iaTSLLfS~FEsW~V~Eh~~~g~~~~~L~~tF~~~tf~~n~~vAI~aGv~a~~l~~~~~~g~vaPF~~a~~~l~~~~~~I 212 (354)
T PF05631_consen 133 IATSLLFSAFESWMVHEHNKRGFPQEWLSDTFSLATFFGNGVVAIGAGVVANVLADWFGFGPVAPFDAAIVLLAVAAVLI 212 (354)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHhHHHHHHHhHHHHHHHHHhCCCCcchHHHHHHHHHHHHHHH
Confidence 999999888776553 33 44444444444333 2223323333233322222222344778877777766666655
Q ss_pred HhhccCC
Q 005249 180 VFFLPES 186 (706)
Q Consensus 180 ~lflpEs 186 (706)
...-+|.
T Consensus 213 ~~~W~EN 219 (354)
T PF05631_consen 213 LKTWPEN 219 (354)
T ss_pred Hhccccc
Confidence 5555665
No 201
>PRK10429 melibiose:sodium symporter; Provisional
Probab=98.70 E-value=1.4e-06 Score=98.19 Aligned_cols=135 Identities=16% Similarity=0.119 Sum_probs=101.2
Q ss_pred HHHHHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhCChHHHHHHHHHHHHHHHHHHh-----hhh
Q 005249 19 GWDNATIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVMLW-----SPN 93 (706)
Q Consensus 19 gl~~~iis~~lp~I~q~fGLS~s~igLl~S~~~Ig~~Igsl~~G~LaDR~GRRrvLlig~iL~aIgsll~a~-----a~s 93 (706)
.......+...+++.++..-+....+++.++..++.+++.+++++++||+|+|+++.++.++.+++.+...+ ..+
T Consensus 244 ~~~~~~~~~~~~y~~~y~~~~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gkk~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (473)
T PRK10429 244 NIASNIINGFAIYYFTYVIGDADLFPYYLSYAGAANLVTLILFPRLVKSLSRRILWAGASIFPVLSCGVLLLMGLAAPHN 323 (473)
T ss_pred HHHHHHHhhheeeEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHhccCchh
Confidence 334444444555666655445667777777777899999999999999999999999888776666555432 345
Q ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHhcCC-------cchhhHHhHHHHHHHHHHHHHHHHHHHHH
Q 005249 94 VYVLCIARLLDGFGVGLAVTLVPLYISETAP-------SEIRGRLNTLPQFTGSGGMFLAYCMVFGM 153 (706)
Q Consensus 94 ~~lLli~R~L~GIg~G~~~~~~~a~IsE~fP-------~k~Rg~a~Gi~~ag~~LG~alg~ll~~~l 153 (706)
.+.+++.-++.|++.+...+...+++.|..+ .+..|..+|+......+|..+++.+....
T Consensus 324 ~~~~~i~~~l~g~~~~~~~~~~~am~ad~id~~e~~tG~R~~G~~~s~~~~~~K~~~al~~~i~g~~ 390 (473)
T PRK10429 324 ALLIVIAGILLNIGTALFWVLQVIMVADTVDYGEYKLGIRCESIAYSVQTMVVKGGSAFAAFFIGVV 390 (473)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhHhcCccchhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6777778888999999999999999999966 33346688888888889988886665444
No 202
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=98.69 E-value=1.9e-06 Score=92.31 Aligned_cols=155 Identities=11% Similarity=0.018 Sum_probs=112.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH---cCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhCChHHHHHHHHHHHHHHHH
Q 005249 11 ATIGNFLQGWDNATIAGAIVYIKKD---LNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLV 87 (706)
Q Consensus 11 l~L~~fl~gl~~~iis~~lp~I~q~---fGLS~s~igLl~S~~~Ig~~Igsl~~G~LaDR~GRRrvLlig~iL~aIgsll 87 (706)
..++.+++......++...+.+.++ +|++..+.++..+.+..+++++.++++++.||+|+|+++.++.++..++.++
T Consensus 145 ~~~~~f~yvg~e~~~~~w~~~yl~~~~~~g~s~~~a~~~~s~~~~~~~iGr~~~~~l~~r~g~~~~l~~~~~l~~~~~~l 224 (310)
T TIGR01272 145 GALGIFVYVGAEVSAGSFLVNFLSDPHALGLPEDQAAHFTAYTWGGAMVGRFIGSAVMPMISQGRYLAFNAFLAVLLSIG 224 (310)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHH
Confidence 3444444443444445555555543 6999999999999999999999999999999999999998888888887766
Q ss_pred HHhhhhHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCcchhhHHhHHHHHHHHHHHHHHHHHHHHHHHhccchhhHHHHH
Q 005249 88 MLWSPNVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSWRLMLGV 167 (706)
Q Consensus 88 ~a~a~s~~lLli~R~L~GIg~G~~~~~~~a~IsE~fP~k~Rg~a~Gi~~ag~~LG~alg~ll~~~l~l~~~~GWR~~FlI 167 (706)
....++... ..+-++.|++.+..+|...+...+.+|++ .+.+.++. .+..+|.+++|.+. ....+..|.+..|++
T Consensus 225 ~~~~~~~~~-~~~~~l~g~~~s~i~P~~~s~a~~~~~~~-~~~asai~-~~~~~Gg~i~P~l~--G~lad~~g~~~a~~v 299 (310)
T TIGR01272 225 AALTHGYVA-MWFVLALGLFNSIMFPTIFSLALNALGRH-TSQGSGIL-CLAIVGGAIVPLLQ--GSLADCLGIQLAFAL 299 (310)
T ss_pred HHHcCCHHH-HHHHHHHHHHHHHHHHHHHHHHHhhhhhh-hhhhHHHH-HHHHhcchHHHHHH--HHHHHhccchHHHHH
Confidence 665554433 34566889999999999999999988864 55666765 55667888775433 333445577777764
Q ss_pred HHH
Q 005249 168 LSI 170 (706)
Q Consensus 168 ~ai 170 (706)
..+
T Consensus 300 ~~~ 302 (310)
T TIGR01272 300 PVP 302 (310)
T ss_pred HHH
Confidence 333
No 203
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=98.69 E-value=1.5e-06 Score=95.44 Aligned_cols=166 Identities=17% Similarity=0.105 Sum_probs=110.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhCC---hHHHH-HHHHHHHHHHH
Q 005249 11 ATIGNFLQGWDNATIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGR---RPMLI-LSSVLYFVSGL 86 (706)
Q Consensus 11 l~L~~fl~gl~~~iis~~lp~I~q~fGLS~s~igLl~S~~~Ig~~Igsl~~G~LaDR~GR---RrvLl-ig~iL~aIgsl 86 (706)
+++.+++.......+...+|.+.++.|.+.. .+...++..++..++ .++++||+.| |+... ...++.+++..
T Consensus 197 ~~~~~~~~~~~~~~~~~wlp~~L~~~g~s~~-~~~~~~l~~~~g~~g---~~~~~d~~~r~~~r~~~~~~~~~~~a~~~~ 272 (368)
T TIGR00903 197 IGAILGFGVALFDNLAIWLEAALRPAGLEDI-AGDAVALAILAGLIG---VAVIPDRVARAGLRSIYIRAAALLIAAFFL 272 (368)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCCChH-HHHHHHHHHHHHHHH---HHHhhHHhhhhhhHHHHHHHHHHHHHHHHH
Confidence 3344444455555556677887788888764 555555555554444 4677777754 33333 24444444444
Q ss_pred HHHhhhhHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCcchhhHHhHHHHHHHHHHHHHHHHHHHHHHHhccchhhHHHH
Q 005249 87 VMLWSPNVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSWRLMLG 166 (706)
Q Consensus 87 l~a~a~s~~lLli~R~L~GIg~G~~~~~~~a~IsE~fP~k~Rg~a~Gi~~ag~~LG~alg~ll~~~l~l~~~~GWR~~Fl 166 (706)
+.++..+....+++-++.|++....++...++.+|.+|++.|++++|+.+....+|.++++....... . +-...|.
T Consensus 273 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~rgt~~G~~~~~g~~~~~~~~~~~~~~~--~--~~~~~f~ 348 (368)
T TIGR00903 273 ALAFELNRLALFAFIGIAGLLMLPAYAIIMDWIGKFCDKELHGKAAGAIGFTSRAISVALALAAMLFI--S--SAEAYFT 348 (368)
T ss_pred HHHHccccHHHHHHHHHHHHhhhhhHHHHHHHHHHhcchhhcCcccchhhHHHHHHHHHHHHHHHHHh--c--CHHHHHH
Confidence 44555555555556677778777787888899999999999999999999999999988865554333 1 6667788
Q ss_pred HHHHHHHHHHHHHHhhccC
Q 005249 167 VLSIPALLYFAFAVFFLPE 185 (706)
Q Consensus 167 I~ail~LV~~ll~~lflpE 185 (706)
+.+++.++.++.. +++++
T Consensus 349 ~~~~~~~i~~~~~-~~~~~ 366 (368)
T TIGR00903 349 FLAILITIAFAIA-LLLPN 366 (368)
T ss_pred HHHHHHHHHHHHH-HhCCC
Confidence 8877777766554 34344
No 204
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=98.67 E-value=3.6e-07 Score=104.42 Aligned_cols=120 Identities=18% Similarity=0.172 Sum_probs=86.2
Q ss_pred HHHHHhhh-cchHHHHhHHHHHHHHHHHHHHHhhhhhhhhhHHHHHHHHHHHHHHHHhhcccccchhhhhcccCCcc--h
Q 005249 550 AMKLMDVA-GRRKLLLTTIPVLIVSLIILVISETLQLISPVLKAGISTACVIIYFCCFVAAYGPIPNILCAEIFPTK--V 626 (706)
Q Consensus 550 ~~~l~d~~-grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~--~ 626 (706)
+|+++||+ |||+.++++.++.+++.+++....... ......+.+..++.+ ...+...++++|.+|++ .
T Consensus 65 gG~LaDRilGrrr~iliG~il~~lg~lll~~~~~~~--------~~~~l~l~li~iG~G-~~~~~~~alv~elfp~~~~~ 135 (493)
T PRK15462 65 GGFLADKVLGNRMAVMLGALLMAIGHVVLGASEIHP--------SFLYLSLAIIVCGYG-LFKSNVSCLLGELYEPTDPR 135 (493)
T ss_pred HHHHHHHccCcHHHHHHHHHHHHHHHHHHHHhhcch--------hHHHHHHHHHHHhcc-cccccHHHHHHHHCCCCCcc
Confidence 89999999 999999999888888776554321100 111111112222222 22355567899999986 6
Q ss_pred hhhHHHHHHHHHHHHHHHHHhHHHHHHHhhchhhHHHHHHHHHHHHHHHHHh
Q 005249 627 RGICIAICAMAYWICDIIVTYTLPVMLSSIGLAGAFGVYAVVCFISWVFVFL 678 (706)
Q Consensus 627 r~~~~~~~~~~~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 678 (706)
|.++.++.++..++|+.++|.+.+.+.+..||+..|.+.++.++++.+.+++
T Consensus 136 R~sgf~i~Y~~~nlG~~iap~l~g~L~~~~Gw~~~F~iaaigm~l~li~~~~ 187 (493)
T PRK15462 136 RDGGFSLMYAAGNVGSIIAPIACGYAQEEYSWAMGFGLAAVGMIAGLVIFLC 187 (493)
T ss_pred ccceehHHHHHHHHHHHHHHHHHHHHHhhhChHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999998877666655555443
No 205
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=98.67 E-value=1.4e-06 Score=93.26 Aligned_cols=130 Identities=18% Similarity=0.147 Sum_probs=100.4
Q ss_pred HHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhh-CChHHHHHHHHHHHHHHHHHHhhhhHHHHHHHH
Q 005249 23 ATIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWL-GRRPMLILSSVLYFVSGLVMLWSPNVYVLCIAR 101 (706)
Q Consensus 23 ~iis~~lp~I~q~fGLS~s~igLl~S~~~Ig~~Igsl~~G~LaDR~-GRRrvLlig~iL~aIgsll~a~a~s~~lLli~R 101 (706)
..+...+|.+.++.|.+..+.+.+.+++.++.+++.++.|++.||+ +||+.+.++.++.+++.+++.+.++...+. ..
T Consensus 214 ~~~~~~lp~~~~~~g~~~~~~g~~~~~~~~~~i~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 292 (355)
T TIGR00896 214 YSLIGWLPAILISHGASAATAGSLLALMQLAQAASALLIPALARRVKDQRGIVAVLAVLQLVGLCGLLFAPMHGLWA-WA 292 (355)
T ss_pred HHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHHHHHHHHHhhhhHHHH-HH
Confidence 3344556777788999999999999999999999999999999999 566677788888888777776655433332 45
Q ss_pred HHHHHHHHhHHHHHHHHHHhcC-CcchhhHHhHHHHHHHHHHHHHHHHHHHHH
Q 005249 102 LLDGFGVGLAVTLVPLYISETA-PSEIRGRLNTLPQFTGSGGMFLAYCMVFGM 153 (706)
Q Consensus 102 ~L~GIg~G~~~~~~~a~IsE~f-P~k~Rg~a~Gi~~ag~~LG~alg~ll~~~l 153 (706)
++.|++.+..++...+.+.+.. ++++++...++.+....+|.++++.+....
T Consensus 293 ~l~g~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~gp~~~G~l 345 (355)
T TIGR00896 293 LVLGLGQGGAFPLALTLIGLRSRQAAQAAALSAMAQSIGYLLAALGPLFVGVL 345 (355)
T ss_pred HHHHHhhhhHhHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6789999998888777776554 456678899998888888888885554333
No 206
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=98.66 E-value=9.1e-07 Score=98.73 Aligned_cols=172 Identities=15% Similarity=0.146 Sum_probs=110.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHH-HHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhCChHHH--------HHHHH
Q 005249 9 IAATIGNFLQGWDNATIAGAIVYI-KKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPML--------ILSSV 79 (706)
Q Consensus 9 iil~L~~fl~gl~~~iis~~lp~I-~q~fGLS~s~igLl~S~~~Ig~~Igsl~~G~LaDR~GRRrvL--------lig~i 79 (706)
...++..+...+....+...+|.+ .+.+|.+..+.+++.++..++..++.+++|+++||+++|+.. ..+..
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~ 343 (465)
T TIGR00894 264 WAIWFAIFGHFWLYTILPTYLPTFISWVLRVSGKENGLLSSLPYLFAWLCSIFAGYLADFLKSSKTLSLTAARKIFNGIG 343 (465)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcChHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHH
Confidence 344455555555555555566654 567899999999999999999999999999999998754321 11111
Q ss_pred HH--HHHHHHHHh-hhhHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCcchhhHHhHHHHHHHHHHHHHHHHHHHHHHHh
Q 005249 80 LY--FVSGLVMLW-SPNVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLL 156 (706)
Q Consensus 80 L~--aIgsll~a~-a~s~~lLli~R~L~GIg~G~~~~~~~a~IsE~fP~k~Rg~a~Gi~~ag~~LG~alg~ll~~~l~l~ 156 (706)
+. ++..++... ..+....+++-++.+.+.+...+.......+..|. .+|.++++.+.+..+|.++++.+.......
T Consensus 344 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~g~~~g~~~~~~~l~~~i~p~l~g~~~~~ 422 (465)
T TIGR00894 344 GLGPGIFAYALPYLSAAFYLTIIILTLANAVSSGPLAGVLINSLDLAPR-FLGFIKGITGLPGFIGGLIASTLAGNILSQ 422 (465)
T ss_pred HHHHHHHHHHHHHcCCchHHHHHHHHHHHHHhhhhhhhhhhchhhcChh-HHHHHHHHHHHHHHHHHHHHHHhhheeeCC
Confidence 11 111111122 23444444455555555555555555556677765 799999999999999999986554332211
Q ss_pred c-cchhhHHHHHHHHHHHHHHHHHHh
Q 005249 157 A-SPSWRLMLGVLSIPALLYFAFAVF 181 (706)
Q Consensus 157 ~-~~GWR~~FlI~ail~LV~~ll~~l 181 (706)
. ..+|+..|.+.+++.++..++..+
T Consensus 423 ~~~~~~~~~f~~~~~~~~i~~i~~~~ 448 (465)
T TIGR00894 423 DSKNVWLIVFLIMAFVNILCVIFYLI 448 (465)
T ss_pred CCchHHHHHHHHHHHHHHHHHHHeee
Confidence 1 135999999988888776655443
No 207
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=98.64 E-value=5.8e-07 Score=102.43 Aligned_cols=114 Identities=14% Similarity=0.149 Sum_probs=84.2
Q ss_pred HHHHHhh-hcchHHHHhHHHHHHHHHHHHHHHhhhhhhhhhHHHHHHHHHHHHHHHHhhcccccchhhhhcccCCcch--
Q 005249 550 AMKLMDV-AGRRKLLLTTIPVLIVSLIILVISETLQLISPVLKAGISTACVIIYFCCFVAAYGPIPNILCAEIFPTKV-- 626 (706)
Q Consensus 550 ~~~l~d~-~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~-- 626 (706)
+|+++|| +|||++++.+..+.+++.+.+++..... ....+..++ .........|...++++|.+|++.
T Consensus 70 ~G~laDr~~G~r~~~~~g~~~~~~g~~~~~~~~~~~--------~ll~~~~~l-~~ig~g~~~~~~~~li~~~~p~~~~~ 140 (489)
T PRK10207 70 GGYVGDHLLGTKRTIVLGAIVLAIGYFMTGMSLLKP--------DLIFIALGT-IAVGNGLFKANPASLLSKCYPPKDPR 140 (489)
T ss_pred HHHhhhhccchHHHHHHHHHHHHHHHHHHHHhccch--------hHHHHHHHH-HHhccccccCCHHHHHHHhcCCCchh
Confidence 8999999 9999999999999999888777643211 111111111 122222344666789999998874
Q ss_pred hhhHHHHHHHHHHHHHHHHHhHHHHHHHhhchhhHHHHHHHHHHHH
Q 005249 627 RGICIAICAMAYWICDIIVTYTLPVMLSSIGLAGAFGVYAVVCFIS 672 (706)
Q Consensus 627 r~~~~~~~~~~~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 672 (706)
|+.+.++.++..++|.+++|.+.|.+.+..||+..|++.++...++
T Consensus 141 ~~~~~~~~~~~~nig~~~g~~l~g~l~~~~gw~~~F~i~~i~~~~~ 186 (489)
T PRK10207 141 LDGAFTLFYMSINIGSLISLSLAPVIADKFGYSVTYNLCGAGLIIA 186 (489)
T ss_pred hhcchhHHHHHHHHHHHHHHHHHHHHHHhhChHHHHHHHHHHHHHH
Confidence 5778999999999999999999999999999999998865433333
No 208
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=98.63 E-value=4.6e-06 Score=92.98 Aligned_cols=173 Identities=20% Similarity=0.225 Sum_probs=133.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHcC-CChhHHHHHHHHHHHHHHHHHHHHHHHhhhhCChHHHHHHHHHHHHHHHHHHhh-
Q 005249 14 GNFLQGWDNATIAGAIVYIKKDLN-LGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVMLWS- 91 (706)
Q Consensus 14 ~~fl~gl~~~iis~~lp~I~q~fG-LS~s~igLl~S~~~Ig~~Igsl~~G~LaDR~GRRrvLlig~iL~aIgsll~a~a- 91 (706)
..++.+.....+..+.+.+.++.| .+....+.+.++..++=++.-++.+++..|+|.|+++.++.+.+++=..+.++.
T Consensus 215 ~~~l~~~~~~~~~~f~~~yl~~~gg~~~~~~g~~~~l~~~aEi~~f~~~~~~~~r~g~~~ll~~a~~~~~vR~~l~a~~~ 294 (400)
T PF03825_consen 215 AAFLIGISHAAYYTFFSIYLQELGGYSGSTIGILWALGVVAEIPFFFFSGRFLKRFGIKWLLLLALVAYAVRWLLYAYFS 294 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhc
Confidence 334555556666666677788888 788888888888888888888899999999999999999999999999888887
Q ss_pred hhHHHHHHH----HHHHHHHHHhHHHHHHHHHHhcCCcchhhHHhHHHHH-HHHHHHHHHHHHHHHHHHhc----cchhh
Q 005249 92 PNVYVLCIA----RLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQF-TGSGGMFLAYCMVFGMSLLA----SPSWR 162 (706)
Q Consensus 92 ~s~~lLli~----R~L~GIg~G~~~~~~~a~IsE~fP~k~Rg~a~Gi~~a-g~~LG~alg~ll~~~l~l~~----~~GWR 162 (706)
++.+...+. ..+.|+..+..+.....|+.+..|++.|+++.+++.. ..++|.++|..+....+... ...|.
T Consensus 295 ~~~~~~~~~~~l~q~lhG~tf~~~~~a~~~yi~~~~p~~~~at~Q~l~~~~~~Glg~~iG~~igG~l~~~~g~~~~~~~~ 374 (400)
T PF03825_consen 295 DPWPFIVALQLLGQLLHGLTFGLFHAASVRYIDRIAPPELRATAQGLYSALSFGLGGAIGSLIGGWLYDAFGARGMFDWS 374 (400)
T ss_pred CCcHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCccchHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhcchhhhhHH
Confidence 454443333 4569999999999999999999999999999999876 46899999877666554221 12466
Q ss_pred HHHHHHHHHHHHHHHHHHhhccCC
Q 005249 163 LMLGVLSIPALLYFAFAVFFLPES 186 (706)
Q Consensus 163 ~~FlI~ail~LV~~ll~~lflpEs 186 (706)
..+.+.+.+.++..++.+++.+|+
T Consensus 375 ~~~~v~a~~~~~~~~~f~~~fk~~ 398 (400)
T PF03825_consen 375 AVFLVFAVMALVILVLFVILFKPK 398 (400)
T ss_pred HHHHHHHHHHHHHHHHHHhhccCC
Confidence 677777777777666666666654
No 209
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=98.63 E-value=5.2e-07 Score=103.54 Aligned_cols=170 Identities=14% Similarity=0.101 Sum_probs=145.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhC--ChHHHHHHHHHHHHHH
Q 005249 8 AIAATIGNFLQGWDNATIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLG--RRPMLILSSVLYFVSG 85 (706)
Q Consensus 8 liil~L~~fl~gl~~~iis~~lp~I~q~fGLS~s~igLl~S~~~Ig~~Igsl~~G~LaDR~G--RRrvLlig~iL~aIgs 85 (706)
.+..+++..+..+...+....+|.+.++.+++..+.+.+.++..+...++.++.|+++|+.. ++.+..++.++.+++.
T Consensus 300 fl~~~~~~~~~~~g~~~p~~~l~~~~~~~g~~~~~aa~l~Siigi~~i~gRi~~G~laD~~~~~~~~~~~~~ll~~gl~~ 379 (509)
T KOG2504|consen 300 FLLLALSNLFAYLGFNVPFVYLPSYAKSLGLSSNDAAFLLSIIGVSDIIGRIILGLLADKPGIRALVLFLLTLLIAGLAR 379 (509)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCChhhhHHHHHHHHHhhhhhhhhhhhhcCccccchHHHHHHHHHHHHHHH
Confidence 34455666666666677777889999999999999999999999999999999999999998 4456668888888899
Q ss_pred HHHHhhhhHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCcchhhHHhHHHHHHHHHHHHHHHHHHHHHHHhccc-hhhHH
Q 005249 86 LVMLWSPNVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASP-SWRLM 164 (706)
Q Consensus 86 ll~a~a~s~~lLli~R~L~GIg~G~~~~~~~a~IsE~fP~k~Rg~a~Gi~~ag~~LG~alg~ll~~~l~l~~~~-GWR~~ 164 (706)
+.+.++++++.++....+.|+..|.........+.|..+.++-..+.|+...+.+++..+|+.+.. ...+.. +|...
T Consensus 380 ~~~p~~~~~~~l~~~~~~fG~~~g~~~~l~~~i~~~~~g~~~l~~a~Gl~l~~~gi~~l~gpPiag--~~~d~tg~Y~~~ 457 (509)
T KOG2504|consen 380 LFLPFATTYVGLIVFSILFGFCVGSFSSLTPVILVDLVGLEKLSNAYGLLLLFQGIGALVGPPIAG--LLYDITGNYDHA 457 (509)
T ss_pred HHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChhhcchHHHHHHHHhHHHHHcCcccce--eeeeccCCeeee
Confidence 899999999999999999999999999888899999999999999999999999999999955544 333333 49999
Q ss_pred HHHHHHHHHHHHHHH
Q 005249 165 LGVLSIPALLYFAFA 179 (706)
Q Consensus 165 FlI~ail~LV~~ll~ 179 (706)
|+..++..++..++.
T Consensus 458 f~~~g~~~~~s~~~~ 472 (509)
T KOG2504|consen 458 FYFCGLCFLLSAVLL 472 (509)
T ss_pred hhhcChHHHHHHHHH
Confidence 999998888866543
No 210
>PRK09669 putative symporter YagG; Provisional
Probab=98.63 E-value=3.8e-06 Score=93.61 Aligned_cols=128 Identities=16% Similarity=0.176 Sum_probs=92.7
Q ss_pred HHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhCChHHHHHHHHHHHHHHHHHHh--hhhHHHHHHHHHH
Q 005249 26 AGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVMLW--SPNVYVLCIARLL 103 (706)
Q Consensus 26 s~~lp~I~q~fGLS~s~igLl~S~~~Ig~~Igsl~~G~LaDR~GRRrvLlig~iL~aIgsll~a~--a~s~~lLli~R~L 103 (706)
+...+++.++.--.....+.+.....++.+++.+++++++||+|+|+.+.++.++.+++.++..+ .++.+.+++..++
T Consensus 249 ~~~~~y~~~~~~~~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 328 (444)
T PRK09669 249 GGATLYYVNYVLLRPDLATLFLVTGMIAGLFGALLSERLLGKFDRVRAFKWTIVAFVILSALIFFIPPSNVWLIFALNIL 328 (444)
T ss_pred hhhhheeeeeecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHH
Confidence 33444444443323344455666677888889999999999999999999887766654433322 3567777888899
Q ss_pred HHHHHHhHHHHHHHHHHhcCCc-------chhhHHhHHHHHHHHHHHHHHHHHHHHH
Q 005249 104 DGFGVGLAVTLVPLYISETAPS-------EIRGRLNTLPQFTGSGGMFLAYCMVFGM 153 (706)
Q Consensus 104 ~GIg~G~~~~~~~a~IsE~fP~-------k~Rg~a~Gi~~ag~~LG~alg~ll~~~l 153 (706)
.|++.+...+...++++|..+. +..|...++...+..+|.++++.+....
T Consensus 329 ~g~~~~~~~~~~~am~ad~~d~~e~~~G~r~~g~~~s~~~~~~klg~alg~~i~g~l 385 (444)
T PRK09669 329 FNFIQNLTTPLQWSMFSDVVDYEEKRSGRRLDGLVFSTNLFAIKLGLAIGGAVVGWI 385 (444)
T ss_pred HHHHHHHHHHHHHHHHHhhhhhhhhhcCcCcchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999988862 2236677888888888888886665544
No 211
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=98.62 E-value=1.1e-06 Score=97.56 Aligned_cols=176 Identities=18% Similarity=0.104 Sum_probs=139.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH-HHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhh--CChHHHH-HHHHHHH
Q 005249 7 VAIAATIGNFLQGWDNATIAGAIVY-IKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWL--GRRPMLI-LSSVLYF 82 (706)
Q Consensus 7 iliil~L~~fl~gl~~~iis~~lp~-I~q~fGLS~s~igLl~S~~~Ig~~Igsl~~G~LaDR~--GRRrvLl-ig~iL~a 82 (706)
.++.+++++++.+..+..+.-..|. +.|..|.+....++..+++-++...|++++|+++||+ |||.... +++++..
T Consensus 253 ~iW~la~a~vfvYivR~gi~dW~p~YL~e~k~~s~~~a~~a~~lfE~agl~G~Ll~GwlSDklfkgrR~p~~~i~~~~i~ 332 (448)
T COG2271 253 LIWLLALANVFVYVVRYGINDWGPLYLSEVKGFSLVKANWAISLFEVAGLPGTLLAGWLSDKLFKGRRGPMALIFMLLIT 332 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhHHHHHHHhcCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcccccchHHHHHHHHHH
Confidence 4667788888888888888777765 6667899999999999999999999999999999996 6665544 5555555
Q ss_pred HHHHHHHhhh--hHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCcchhhHHhHHHHHHHHH-HHHHHHHHHHHHHHhccc
Q 005249 83 VSGLVMLWSP--NVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSG-GMFLAYCMVFGMSLLASP 159 (706)
Q Consensus 83 Igsll~a~a~--s~~lLli~R~L~GIg~G~~~~~~~a~IsE~fP~k~Rg~a~Gi~~ag~~L-G~alg~ll~~~l~l~~~~ 159 (706)
++.+..-.++ |+.+..++-+++|+..-+.....-....|..|++--|.+.|+...+..+ |.+.+..+... ..+..
T Consensus 333 ~~~~~~w~~~~~~~~l~~~~l~~iGf~IyGPqmLiGl~a~e~~pK~AaGtA~Gf~Glf~Yl~Ga~~a~~~~g~--i~d~~ 410 (448)
T COG2271 333 ASLVLYWLAPNGSYLLDAILLFIIGFLIYGPQMLIGLAAAEFVPKKAAGTATGFVGLFAYLIGAALAGLPLGY--IADTW 410 (448)
T ss_pred HHHHHHHcCCCccHHHHHHHHHHHHHHHhhHHHHHHHHHhccccHhhccchhchhhhHHHHhhHHhcCCccee--eEecC
Confidence 5555555554 5688888999999988887777788899999999999999999999999 77777444333 23447
Q ss_pred hhhHHHHHHHHHHHHHHHHHHhhcc
Q 005249 160 SWRLMLGVLSIPALLYFAFAVFFLP 184 (706)
Q Consensus 160 GWR~~FlI~ail~LV~~ll~~lflp 184 (706)
||...|++..+.++++.++...+..
T Consensus 411 gW~g~Fi~~~~~a~l~~lll~~~~~ 435 (448)
T COG2271 411 GWDGGFIVLSIAALLAILLLLPVWN 435 (448)
T ss_pred CCcchHHHHHHHHHHHHHHHHHHHh
Confidence 9999999888877776666555444
No 212
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=98.58 E-value=4.1e-06 Score=95.06 Aligned_cols=168 Identities=10% Similarity=-0.043 Sum_probs=108.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhCChHHHHHHHHHHHHHHHHHH-hh--
Q 005249 15 NFLQGWDNATIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVML-WS-- 91 (706)
Q Consensus 15 ~fl~gl~~~iis~~lp~I~q~fGLS~s~igLl~S~~~Ig~~Igsl~~G~LaDR~GRRrvLlig~iL~aIgsll~a-~a-- 91 (706)
+++.+-....++..+|.+.++ ..+.........+..+...++.+++|+++||+|+|+++.++.++.+++..... ..
T Consensus 261 y~~tFG~fvg~s~~lp~~~~~-~~~~~~~l~~~~l~~l~~~l~rplgG~LADRiG~~~vl~~~~i~~~i~~~~~~l~lp~ 339 (462)
T PRK15034 261 YLATFGSFIGFSAGFAMLAKT-QFPDVNILRLAFFGPFIGAIARSVGGAISDKFGGVRVTLINFIFMAIFSALLFLTLPG 339 (462)
T ss_pred HHHHHHHHHHHHHHHHHHHHH-HcChHHHHHHHHHHHHHHHHHHHhhHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcc
Confidence 333333333345455555444 22333333334455677888889999999999999999988887777764322 22
Q ss_pred ---hhHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCc---------------------chhhHHhHHHHHHHHHHHHHHH
Q 005249 92 ---PNVYVLCIARLLDGFGVGLAVTLVPLYISETAPS---------------------EIRGRLNTLPQFTGSGGMFLAY 147 (706)
Q Consensus 92 ---~s~~lLli~R~L~GIg~G~~~~~~~a~IsE~fP~---------------------k~Rg~a~Gi~~ag~~LG~alg~ 147 (706)
.+++.+.+..+...++.|........++...+|+ ++-|.+.|+..+...+|.++.+
T Consensus 340 ~~~~~~~~~~~~~~~l~~~~G~gngsvfk~ip~~f~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~G~v~a~G~~Ggf~~p 419 (462)
T PRK15034 340 TGSGNFIAFYAVFMGLFLTAGLGSGSTFQMIAVIFRQITIYRVKMKGGSDEQAQREAVTETAAALGFISAIGAVGGFFIP 419 (462)
T ss_pred ccccHHHHHHHHHHHHHHHhcccchHHHHhhHHHHhhhhhhcccccccchhHHhhHHHHHHHHHHHHHHHHHHcccchhh
Confidence 2566666666666677777777777788888874 1456788888888888777765
Q ss_pred HHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHhhcc
Q 005249 148 CMVFGMSLLASPSWRLMLGVLSIPALLYFAFAVFFLP 184 (706)
Q Consensus 148 ll~~~l~l~~~~GWR~~FlI~ail~LV~~ll~~lflp 184 (706)
....... ....++...|++..+..+++.++.+.+.-
T Consensus 420 ~~~g~~~-~~~g~~~~~~~~~~~~~~~~~~~~w~~y~ 455 (462)
T PRK15034 420 QAFGMSL-NMTGSPVGAMKVFLIFYIVCVLLTWLVYG 455 (462)
T ss_pred HHHHHHH-HHcCCcHHHHHHHHHHHHHHHHHHHHHhc
Confidence 4433332 22235777888888877777777666543
No 213
>PRK10133 L-fucose transporter; Provisional
Probab=98.56 E-value=4.9e-06 Score=93.25 Aligned_cols=142 Identities=7% Similarity=-0.093 Sum_probs=105.8
Q ss_pred HHH-HHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhCChHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHH
Q 005249 30 VYI-KKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVMLWSPNVYVLCIARLLDGFGV 108 (706)
Q Consensus 30 p~I-~q~fGLS~s~igLl~S~~~Ig~~Igsl~~G~LaDR~GRRrvLlig~iL~aIgsll~a~a~s~~lLli~R~L~GIg~ 108 (706)
+++ .+.+|+++.+.++....+.++..++.+++|++.||+|+|+++..+.++.+++.++..+.++. ..+..-++.|++.
T Consensus 283 ~~l~~~~~g~s~~~ag~~~~~~~~~~~vG~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~glg~ 361 (438)
T PRK10133 283 RYAVEEIPGMTAGFAANYLTGTMVCFFIGRFTGTWLISRFAPHKVLAAYALIAMALCLISAFAGGH-VGLIALTLCSAFM 361 (438)
T ss_pred HHHhhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHcCCh-HHHHHHHHHHHHH
Confidence 343 34689999999999999999999999999999999999999998888877777666665554 2345677899999
Q ss_pred HhHHHHHHHHHHhcCCcchhhHHhHHHHHHHHHHHHHHHHHHHHHHHhccch-hhHHHHHHHHHHHHHH
Q 005249 109 GLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPS-WRLMLGVLSIPALLYF 176 (706)
Q Consensus 109 G~~~~~~~a~IsE~fP~k~Rg~a~Gi~~ag~~LG~alg~ll~~~l~l~~~~G-WR~~FlI~ail~LV~~ 176 (706)
+..+|...+...+.+|++ .+.+.++..... +|..+++.+.. ...+..| -|..|++..+..+..+
T Consensus 362 ~~i~P~~~s~a~~~~~~~-~~~as~l~~~~~-~g~~~~~~i~G--~l~~~~g~~~~~~~v~~~~~~~~~ 426 (438)
T PRK10133 362 SIQYPTIFSLGIKNLGQD-TKYGSSFIVMTI-IGGGIVTPVMG--FVSDAAGNIPTAELIPALCFAVIF 426 (438)
T ss_pred HHHHHHHHHHHHcccchh-hccchhHHhHHh-ccchHHHHHHH--HHHHhccchHHHHHHHHHHHHHHH
Confidence 999999999999998764 667777776443 55555533222 2234445 6777766555444433
No 214
>PF13347 MFS_2: MFS/sugar transport protein
Probab=98.55 E-value=2.4e-06 Score=94.69 Aligned_cols=142 Identities=16% Similarity=0.168 Sum_probs=117.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH-cCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhCChHHHHHHHHHHHHHHHHHH
Q 005249 11 ATIGNFLQGWDNATIAGAIVYIKKD-LNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVML 89 (706)
Q Consensus 11 l~L~~fl~gl~~~iis~~lp~I~q~-fGLS~s~igLl~S~~~Ig~~Igsl~~G~LaDR~GRRrvLlig~iL~aIgsll~a 89 (706)
+.+..++........+...+++.++ ++.+ ...+.+..+..++..++.+++++++||+|+|+++..+.++.+++.++..
T Consensus 230 l~~~~~~~~~~~~~~~~~~~y~~~~vl~~~-~~~~~~~~~~~~~~~v~~~~~~~l~~r~gk~~~~~~~~~~~~~~~~~~~ 308 (428)
T PF13347_consen 230 LLLAFFLQWLAFALMNTFLPYYFTYVLGNE-GLISIFMLIFFVASIVGSPLWGRLSKRFGKKKVYIIGLLLAALGFLLLF 308 (428)
T ss_pred HHHHHHHHHhhhhhhhhHHHHHHHHHhcCc-hhhHHHHHHHHHHHHHHHHHHHHHHHHccceeehhhhHHHHHHHHHHHH
Confidence 3444455555566666666776666 4544 6778888899999999999999999999999999999999999999888
Q ss_pred hhh--hHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCc-------chhhHHhHHHHHHHHHHHHHHHHHHHHH
Q 005249 90 WSP--NVYVLCIARLLDGFGVGLAVTLVPLYISETAPS-------EIRGRLNTLPQFTGSGGMFLAYCMVFGM 153 (706)
Q Consensus 90 ~a~--s~~lLli~R~L~GIg~G~~~~~~~a~IsE~fP~-------k~Rg~a~Gi~~ag~~LG~alg~ll~~~l 153 (706)
+.+ +.+.+++..++.|++.+..++...++++|..+. ++.|..+|+......+|..++..+....
T Consensus 309 ~~~~~~~~~~~i~~~l~gi~~~~~~~~~~a~~ad~id~~e~~tg~r~~g~~~s~~~~~~k~~~~la~~i~g~~ 381 (428)
T PF13347_consen 309 FLGPGSPWLVLILFILAGIGYGAFFVIPWAMLADVIDYDEWKTGRRREGMYFSVNSFFIKIGQGLAGAIVGLL 381 (428)
T ss_pred HHHhhhHHHHHHHHHHhHhhhcccccccccccccchhhHHHhcCCCchHHHHHhhhhhhHHHHHHHHHHHHHH
Confidence 876 999999999999999999999999999998874 3358899999999999999886655544
No 215
>PRK11043 putative transporter; Provisional
Probab=98.53 E-value=1.4e-05 Score=87.07 Aligned_cols=123 Identities=19% Similarity=0.143 Sum_probs=94.4
Q ss_pred HHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhCChHHHHHHHHHHHHHHHHHH---h--hhhHHHHHHHH
Q 005249 27 GAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVML---W--SPNVYVLCIAR 101 (706)
Q Consensus 27 ~~lp~I~q~fGLS~s~igLl~S~~~Ig~~Igsl~~G~LaDR~GRRrvLlig~iL~aIgsll~a---~--a~s~~lLli~R 101 (706)
...|.+.+++|.+..+.++......++..++.++.+++.||+|+|+.+....++.+++.+... . .++.+.+++..
T Consensus 224 ~~~p~~~~~~g~s~~~~g~~~~~~~~~~~~g~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (401)
T PRK11043 224 TGSPFILEQMGYSPADIGLSYVPQTIAFLVGGYGCRAALQKWGGEQLLPWLLVLFAVSVIAIWLASLLSHPSLVPLLIPF 303 (401)
T ss_pred HHhHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHhccCcHHHHHHHH
Confidence 345777788999999999988888899999999999999999999877665555444433322 2 34566666677
Q ss_pred HHHHHHHHhHHHHHHHHHHhcCCcchhhHHhHHHHHHHHHHHHHHHHHH
Q 005249 102 LLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMV 150 (706)
Q Consensus 102 ~L~GIg~G~~~~~~~a~IsE~fP~k~Rg~a~Gi~~ag~~LG~alg~ll~ 150 (706)
++.|++.+..++.......+..| ++|++++++.+.....+..+++...
T Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~~~~~~~~~~ 351 (401)
T PRK11043 304 CVMAAANGAIYPIVVAQALRPFP-QATGKAAALQNTLQLGLCFLASLLV 351 (401)
T ss_pred HHHHHHHHHHHHHHHHHHhhhCc-ccChHHHHHHHHHHHHHHHHHHHHH
Confidence 88899999998888888888876 5799999999987776666664443
No 216
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=98.52 E-value=1.9e-06 Score=95.43 Aligned_cols=171 Identities=15% Similarity=0.057 Sum_probs=125.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHH-HHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhCChHHHHHHHHHHHHHHHHH
Q 005249 10 AATIGNFLQGWDNATIAGAIV-YIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVM 88 (706)
Q Consensus 10 il~L~~fl~gl~~~iis~~lp-~I~q~fGLS~s~igLl~S~~~Ig~~Igsl~~G~LaDR~GRRrvLlig~iL~aIgsll~ 88 (706)
.+++.++...-..-.++..+| ++..+||++..+.+.+...+.+...+..+.+|+++||+|.+|++.+...+++++..+.
T Consensus 222 ~lsllY~~tFG~Fvgfs~~l~~~~~~~fg~~~~~Ag~~a~~f~~~g~l~Rp~GG~LsDR~Gg~rv~~~~f~~~~~~~~~l 301 (417)
T COG2223 222 LLSLLYFATFGGFVGFSAYLPMYLVTQFGLSPVTAGLIAFLFPLIGALARPLGGWLSDRIGGRRVTLAVFVGMALAAALL 301 (417)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHHHHhccchhhhhccchhHHHHHHHHHHHHHHHH
Confidence 344444444444444455555 4677899999999999999999999999999999999999999999888888888877
Q ss_pred Hhh-------hhHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCcchhhHHhHHHHHHHHHHHHHHHHHHHHHHHhccchh
Q 005249 89 LWS-------PNVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSW 161 (706)
Q Consensus 89 a~a-------~s~~lLli~R~L~GIg~G~~~~~~~a~IsE~fP~k~Rg~a~Gi~~ag~~LG~alg~ll~~~l~l~~~~GW 161 (706)
.+. .+....++.-+..++..|......+.++...+|+ +-|.+.|+..+..++|.+.-+......... ...+
T Consensus 302 ~~~~~~~~~~~~~~~~~~~~l~l~~~~G~GnGsvfk~Ip~if~~-~~G~v~G~vga~G~lGGf~lp~~~g~~~~~-tg~~ 379 (417)
T COG2223 302 SLFLTGFGHGGSFVVFVAVFLALFVFAGLGNGSVFKMIPVIFPK-ETGAVTGIVGAIGGLGGFFLPLAFGVSLDL-TGSY 379 (417)
T ss_pred HccccccccCcchHHHHHHHHHHHHHhccCcchheeechHHHHh-hhhHHHHHHHHhccccccchhHHHHHHHHh-cccH
Confidence 765 3455555555555666666666667777778875 578999999999999987654433333222 2258
Q ss_pred hHHHHHHHHHHHHHHHHHHhh
Q 005249 162 RLMLGVLSIPALLYFAFAVFF 182 (706)
Q Consensus 162 R~~FlI~ail~LV~~ll~~lf 182 (706)
...|++...+.+++.++.+..
T Consensus 380 ~~~f~~~~~~~~~a~v~~~~~ 400 (417)
T COG2223 380 TGAFMLLLAFYLVALVLTWAL 400 (417)
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 899998888888877655443
No 217
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=98.51 E-value=1e-05 Score=91.75 Aligned_cols=140 Identities=11% Similarity=0.072 Sum_probs=107.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHH----Hhhh-hCChHHH--HHHHHHHHHHHHHHHh---------hhhHHHHHHHHHHHHH
Q 005249 43 EGLVVAMSLIGATAITTCSGP----ISDW-LGRRPML--ILSSVLYFVSGLVMLW---------SPNVYVLCIARLLDGF 106 (706)
Q Consensus 43 igLl~S~~~Ig~~Igsl~~G~----LaDR-~GRRrvL--lig~iL~aIgsll~a~---------a~s~~lLli~R~L~GI 106 (706)
.+++.++..+..++.+++... +.+| .+.+... .+|.++.+++.+..++ ..+++++++..++.++
T Consensus 314 ~~~~~~~n~~~iil~~p~~~~~~~~l~~~~~~~~~~~k~~~G~~l~~~~~~~~~~~~~~~~~~~~~s~~~~i~~~~~~~~ 393 (475)
T TIGR00924 314 VIWFQSLNPFWVVVGSPVLAMIWTRLGRKGKDPTTPLKFTLGMLFCGASFLTFAASIWFADAGGLTSPWFMVLIYLFQTL 393 (475)
T ss_pred HHHHHhhhHHHHHHHHHHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCHHHHHHHHHHHHH
Confidence 567777777777777777554 4444 3334444 7788888888877764 4589999999999999
Q ss_pred HHHhHHHHHHHHHHhcCCcchhhHHhHHHHHHHHHHHHHHHHHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHhhcc
Q 005249 107 GVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSWRLMLGVLSIPALLYFAFAVFFLP 184 (706)
Q Consensus 107 g~G~~~~~~~a~IsE~fP~k~Rg~a~Gi~~ag~~LG~alg~ll~~~l~l~~~~GWR~~FlI~ail~LV~~ll~~lflp 184 (706)
|+....|...+++++..|++.||+++|++..+..+|..++..+..... ...+|...|...++.+++..++.++..|
T Consensus 394 ge~~~~p~~~~~~~~~aP~~~~g~~~g~~~l~~~~g~~l~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 469 (475)
T TIGR00924 394 GELMISPLGLSWWTKIAPQRLMGQMLGMWFLAQAMGSLLGGYLATFGA--VPQGVTGVFGKIGLVTLLVGVVMALMVP 469 (475)
T ss_pred HHHHHhHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--cccchhhHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999866554432 3447888888877777776665544433
No 218
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=98.50 E-value=9.6e-06 Score=92.66 Aligned_cols=143 Identities=14% Similarity=0.086 Sum_probs=104.7
Q ss_pred HHHHHHHHHHHHHHHHHHH----HHHhhhhCChHHHHHHHHHHHHHHHHHHhhhh---------HHHHHHHHHHHHHHHH
Q 005249 43 EGLVVAMSLIGATAITTCS----GPISDWLGRRPMLILSSVLYFVSGLVMLWSPN---------VYVLCIARLLDGFGVG 109 (706)
Q Consensus 43 igLl~S~~~Ig~~Igsl~~----G~LaDR~GRRrvLlig~iL~aIgsll~a~a~s---------~~lLli~R~L~GIg~G 109 (706)
.+++.++..+...+..++. +++.+|++..+.+.+|.++.+++.++.+++.+ .+++++..++.|+|++
T Consensus 318 ~~~~~s~n~i~iil~~p~~~~~~~~l~~r~~~~~~~~~G~~l~~l~f~~l~~~~~~~~~~~~vs~~~~~~~~~l~~~ge~ 397 (500)
T PRK09584 318 PEQYQALNPFWIMIGSPILAAIYNKMGDRLPMPHKFAIGMVLCSGAFLVLPLGAKFANDAGIVSVNWLIASYGLQSIGEL 397 (500)
T ss_pred HHHHHHHhHHHHHHHHHHHHHHHHHhCcCCCcHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccCHHHHHHHHHHHHHHHH
Confidence 4455555555555555555 66666677778899999999999988877655 4678889999999999
Q ss_pred hHHHHHHHHHHhcCCcchhhHHhHHHHHHHHHHHHHHHHHHHHHHH--------hccchhhHHHHHHHHHHHHHHHHHHh
Q 005249 110 LAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSL--------LASPSWRLMLGVLSIPALLYFAFAVF 181 (706)
Q Consensus 110 ~~~~~~~a~IsE~fP~k~Rg~a~Gi~~ag~~LG~alg~ll~~~l~l--------~~~~GWR~~FlI~ail~LV~~ll~~l 181 (706)
...|...+++.+..|++.||+++|++..+..+|..++......... ....+....|...++++++.+++.++
T Consensus 398 ~~~p~g~s~~~~~aP~~~rg~~~g~~~l~~a~g~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~a~~~~~ 477 (500)
T PRK09584 398 MISGLGLAMVAQLVPQRLMGFIMGSWFLTTAGAALIAGYVANLMAVPDNVTDPLMSLEVYGRVFLQIGIATAVIAVLMLL 477 (500)
T ss_pred HHhHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhhhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999988888888877544421110 01123677888888777665555544
Q ss_pred hccC
Q 005249 182 FLPE 185 (706)
Q Consensus 182 flpE 185 (706)
..|.
T Consensus 478 ~~~~ 481 (500)
T PRK09584 478 TAPK 481 (500)
T ss_pred HHHH
Confidence 4443
No 219
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=98.45 E-value=5e-06 Score=94.93 Aligned_cols=180 Identities=18% Similarity=0.130 Sum_probs=119.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhCChHHHHHHHHHHHHHHHHHHhh
Q 005249 12 TIGNFLQGWDNATIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVMLWS 91 (706)
Q Consensus 12 ~L~~fl~gl~~~iis~~lp~I~q~fGLS~s~igLl~S~~~Ig~~Igsl~~G~LaDR~GRRrvLlig~iL~aIgsll~a~a 91 (706)
.+..+....+.+.+..+.+.+.+..|.+... .+...+..+...++.+++.++.||+|||+.++.+.+.+.++.++++..
T Consensus 301 ~l~~fqq~tG~~~~~~Y~~~if~~~g~~~~~-~~~~~~~~~v~~~~t~~~~~lvd~~gRr~lll~s~~~m~~~~~~~~~~ 379 (513)
T KOG0254|consen 301 LLQLFQQLTGINYVFYYSTTIFKSAGLKSDT-FLASIILGVVNFLGTLVATYLVDRFGRRKLLLFGAAGMSICLVILAVV 379 (513)
T ss_pred HHHHHHHHhCCceEEeehHHHHHhcCCCCch-HHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHhHHHHHHHHHHHHHH
Confidence 3333334444455555677788888887554 555666677777888888999999999999999999999999888764
Q ss_pred hhH-------------HHHHH-HHHHHHHHHHhHHHHHHHHHHhcCCcchhhHHhHHHHHHHHHHHHHHHHHHHHHHHhc
Q 005249 92 PNV-------------YVLCI-ARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLA 157 (706)
Q Consensus 92 ~s~-------------~lLli-~R~L~GIg~G~~~~~~~a~IsE~fP~k~Rg~a~Gi~~ag~~LG~alg~ll~~~l~l~~ 157 (706)
... ..+.. +-++..+..| ..++.+.+.+|.+|.+.|+++.++......+...+-...... ...
T Consensus 380 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~f~~g-~g~v~w~~~sEifp~~~r~~~~s~~~~~n~~~~~~v~~~~~~--~~~ 456 (513)
T KOG0254|consen 380 GVFALYYPNSSKGAGWLAIVFLCLFIFSFAIG-WGPVPWVIVSEIFPLRLRSKGASLAVAVNWLWNFLISFFFPF--ITE 456 (513)
T ss_pred HHHhccCCCcccchhHHHHHHHHHHHHHHhcc-cccchhhhhhccCcHhHHhhhHHHHHHHHHHHHHHHHHHHHH--HHH
Confidence 211 11222 2233333333 335666789999999999999999888877777765222211 122
Q ss_pred cchhhHHHHHHHHHHHHHHH-HHHhhccCCchhhhcccchHHHHH
Q 005249 158 SPSWRLMLGVLSIPALLYFA-FAVFFLPESPRWLVSKGKMLEAKQ 201 (706)
Q Consensus 158 ~~GWR~~FlI~ail~LV~~l-l~~lflpEsp~~l~~k~~~~~~~~ 201 (706)
..++...|..++..+.+... ..++++||+ +++..|..+
T Consensus 457 ~~~~~~~f~~f~~~~~~~~~~fv~~~~pET------kg~sleei~ 495 (513)
T KOG0254|consen 457 ALGIGGTFGYFGGICLLSLIIFVFFFVPET------KGLTLEEIN 495 (513)
T ss_pred hccccchHHHHHHHHHHHHHHHheEEcccC------CCCcHHHHH
Confidence 22245566666776666666 678889999 666665443
No 220
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=98.43 E-value=1.1e-06 Score=102.14 Aligned_cols=123 Identities=20% Similarity=0.344 Sum_probs=89.2
Q ss_pred HHHHHhhhcchHHHHhHHHHHHHHHHHHHHHhhhhhhhhhHHHHHHHHHHHHHHHHhhcccccchhhhhcccCCcchhhh
Q 005249 550 AMKLMDVAGRRKLLLTTIPVLIVSLIILVISETLQLISPVLKAGISTACVIIYFCCFVAAYGPIPNILCAEIFPTKVRGI 629 (706)
Q Consensus 550 ~~~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~ 629 (706)
.|.++|.+|||..++.+.++.+++.++.......+ ..++...++..+ .+...+....++|+.|.|.|..
T Consensus 98 ~G~LSDlfGRr~~~i~g~~l~vvG~Iv~atA~~~~---------~~iag~~l~Gvg--aG~~~~~~~~isEl~p~k~R~~ 166 (599)
T PF06609_consen 98 VGRLSDLFGRRYFFIIGSLLGVVGSIVCATAQNMN---------TFIAGMVLYGVG--AGVQELAALAISELVPNKWRGL 166 (599)
T ss_pred hHHHHHHhcchHHHHHHHHHHHhHHHHhhcCCcHH---------HHHHHHHHHHHh--hHHHHHHHHHHHHhcccchhhh
Confidence 89999999999999999999999998877654443 333444444443 3333345566899999999999
Q ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHhhchhhHHHHHHHHHHHHHHHHHh-cccCC
Q 005249 630 CIAICAMAYWICDIIVTYTLPVMLSSIGLAGAFGVYAVVCFISWVFVFL-RVPET 683 (706)
Q Consensus 630 ~~~~~~~~~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-~~~et 683 (706)
+.++.....-+...+++.+...+....+||+.|+++++...++++..++ +.|.+
T Consensus 167 ~~~~~~~~~i~~~~~~~~ia~~~~~~~~WRw~~~~~~i~~~i~~vl~~~fY~PP~ 221 (599)
T PF06609_consen 167 GLAIASIPFIITTWISPLIAQLFAAHSGWRWIFYIFIIWSGIALVLIFFFYFPPP 221 (599)
T ss_pred HhHHHHHHHHhhhcccHHHHHHhccCCCcchHHHHHHHHHHHHHHHHHHHhCCCc
Confidence 8887776665555567777766666679999999988887777665443 34443
No 221
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=98.39 E-value=1.4e-06 Score=95.03 Aligned_cols=132 Identities=16% Similarity=0.096 Sum_probs=99.4
Q ss_pred HHHHHHHHHHHHHHhhhhCChHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCcchhhH
Q 005249 51 LIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVMLWSPNVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGR 130 (706)
Q Consensus 51 ~Ig~~Igsl~~G~LaDR~GRRrvLlig~iL~aIgsll~a~a~s~~lLli~R~L~GIg~G~~~~~~~a~IsE~fP~k~Rg~ 130 (706)
.+.-.-|.++.+++.||+|||+.|..+.++++++.++...+.+-....+.-|..-+...+.+.++++|.-|.+|...|+.
T Consensus 391 slaefPGlLIt~~iverlGRKkTMal~l~~f~iflfll~~c~~rn~~tvllf~arafisg~fqvaYvYtPEVyPTavRat 470 (528)
T KOG0253|consen 391 SLAEFPGLLITGVIVERLGRKKTMALSLILFGIFLFLLTTCKTRNAYTVLLFTARAFISGAFQVAYVYTPEVYPTAVRAT 470 (528)
T ss_pred HHhhCCchhHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHhchheEEEEecCcccchhhhhc
Confidence 34556688889999999999999999999999999988887665555555555556666667788899999999999999
Q ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHhhccCC
Q 005249 131 LNTLPQFTGSGGMFLAYCMVFGMSLLASPSWRLMLGVLSIPALLYFAFAVFFLPES 186 (706)
Q Consensus 131 a~Gi~~ag~~LG~alg~ll~~~l~l~~~~GWR~~FlI~ail~LV~~ll~~lflpEs 186 (706)
+.|.-..+..+|.++.++++.-. ...-..+..+++.++++..+...++--|+
T Consensus 471 gvGtcSsmaRIggI~~p~iA~~~----e~s~sl~i~vy~~~~ilagIavcffPiEt 522 (528)
T KOG0253|consen 471 GVGTCSSMARIGGIFSPVIAMRA----ELSTSLPIFVYGALFILAGIAVCFFPIET 522 (528)
T ss_pred chhhhhhHHhhhhhhhhHHHHHh----ccceeehHHHHHHHHHHHHHHheeeeecc
Confidence 99999999999999997666222 11223344566777776665544443354
No 222
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=98.36 E-value=8.8e-06 Score=86.31 Aligned_cols=167 Identities=12% Similarity=0.077 Sum_probs=116.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhCChHHHHHHHHHHHHH-
Q 005249 6 LVAIAATIGNFLQGWDNATIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVS- 84 (706)
Q Consensus 6 liliil~L~~fl~gl~~~iis~~lp~I~q~fGLS~s~igLl~S~~~Ig~~Igsl~~G~LaDR~GRRrvLlig~iL~aIg- 84 (706)
+++.++|+.+.+..+.....++ ..+++.||+|+...+-+.+......++.+++.|.++||+|++.+.+.+..+..+.
T Consensus 267 w~~~iicv~yyva~fPFi~lg~--~fF~~rfGlS~~~a~~i~s~vy~Isav~spvfg~i~Dk~G~n~~wv~~a~~~tl~~ 344 (459)
T KOG4686|consen 267 WVLVIICVLYYVAWFPFITLGP--MFFQKRFGLSAVSAGNILSTVYGISAVLSPVFGAISDKYGFNLWWVASACILTLLG 344 (459)
T ss_pred HHHHHHHHHHHHHHHHHhhhhH--HHHHHhhCCChhhccchhhhhhhhhhhhhhhHHHhHhhhcceehhHHHHHHHHHHH
Confidence 3444455554444443333332 3478899999999999999999999999999999999999998887665554443
Q ss_pred HHHHHhhhhHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCcchhhHHhHHHHHHHHHHHHHHHHHHHHHHHhcc-chhhH
Q 005249 85 GLVMLWSPNVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLAS-PSWRL 163 (706)
Q Consensus 85 sll~a~a~s~~lLli~R~L~GIg~G~~~~~~~a~IsE~fP~k~Rg~a~Gi~~ag~~LG~alg~ll~~~l~l~~~-~GWR~ 163 (706)
-....+ +++.=.+...++|++....-...+..+....|.++.|++.|+.+...++|.++.+++.....-.+. +.|--
T Consensus 345 H~~l~F--t~lsPy~~m~~lGLsysllAcslWP~va~~vpE~qLGTaygf~qsIqNLgla~i~Iiag~i~d~~g~y~~le 422 (459)
T KOG4686|consen 345 HSGLFF--TFLSPYTSMTFLGLSYSLLACSLWPCVASLVPEEQLGTAYGFIQSIQNLGLAFIPIIAGFIADGDGSYDNLE 422 (459)
T ss_pred hhhHHh--hhccHHHHHHHHhhhHHHHHHHHhhhhhhhCCHHHhcchHHHHHHHHhhhhhHHhhhhheeecCCCchhhHH
Confidence 333333 333345667788888887766678888999999999999999999999999998666544432222 33444
Q ss_pred HH-HHHHHHHHHHH
Q 005249 164 ML-GVLSIPALLYF 176 (706)
Q Consensus 164 ~F-lI~ail~LV~~ 176 (706)
+| ++.+.+++...
T Consensus 423 ~ffl~~~~~aL~sv 436 (459)
T KOG4686|consen 423 AFFLIIGLMALTSV 436 (459)
T ss_pred HHHHHHHHHHHHHH
Confidence 44 34444444433
No 223
>PRK11462 putative transporter; Provisional
Probab=98.34 E-value=0.0001 Score=83.32 Aligned_cols=138 Identities=15% Similarity=0.163 Sum_probs=88.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhCChHHHHHHHHHHHHHHHHHHhhh--h
Q 005249 16 FLQGWDNATIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVMLWSP--N 93 (706)
Q Consensus 16 fl~gl~~~iis~~lp~I~q~fGLS~s~igLl~S~~~Ig~~Igsl~~G~LaDR~GRRrvLlig~iL~aIgsll~a~a~--s 93 (706)
++........+....++.++..-+....+.+.+++.++.+++.+++++++||+|+|+++..+.++.++..++..+.+ +
T Consensus 238 ~~~~~~~~~~~~~~~y~~~y~~g~~~~~~~~l~~~~i~~iig~~l~~~l~~r~gkk~~~~~~~~~~~~~~~~~~~~~~~~ 317 (460)
T PRK11462 238 IFNILAVCVRGGAMMYYVTWILGTPEVFVAFLTTYCVGNLIGSALAKPLTDWKCKVTIFWWTNALLAVISLAMFFVPMQA 317 (460)
T ss_pred HHHHHHHHHHHhHhhhhhhhhcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhchhH
Confidence 33344444444445555555543444556677888889999999999999999999988755554444333333322 2
Q ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHhcCC-------cchhhHHhHHHHHHHHHHHHHHHHHHHHH
Q 005249 94 VYVLCIARLLDGFGVGLAVTLVPLYISETAP-------SEIRGRLNTLPQFTGSGGMFLAYCMVFGM 153 (706)
Q Consensus 94 ~~lLli~R~L~GIg~G~~~~~~~a~IsE~fP-------~k~Rg~a~Gi~~ag~~LG~alg~ll~~~l 153 (706)
...+++.-++.|++.+...+...+++.|..+ .+..|...+.......+|.+++..+....
T Consensus 318 ~~~~~~~~~l~g~~~~~~~~l~~~m~ad~~d~~e~~tG~r~~g~~~a~~~f~~Klg~alg~~i~g~i 384 (460)
T PRK11462 318 SITMFVFIFVIGVLHQLVTPIQWVMMSDTVDYGEWCNGKRLTGISFAGTLFVLKLGLAFGGALIGWM 384 (460)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhHHhcCCCchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3344555677788887777776777777665 23335556766677778887776555443
No 224
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=98.31 E-value=5.2e-06 Score=94.37 Aligned_cols=121 Identities=16% Similarity=0.187 Sum_probs=95.7
Q ss_pred HHHHHhhhcchHHHHhHHHHHHHHHHHHHHHhhhhhhhhhHHHHHHHHHHHHHHHHhhcccccchhhhhcccCCcchhhh
Q 005249 550 AMKLMDVAGRRKLLLTTIPVLIVSLIILVISETLQLISPVLKAGISTACVIIYFCCFVAAYGPIPNILCAEIFPTKVRGI 629 (706)
Q Consensus 550 ~~~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~ 629 (706)
.|.++|++|||++++.+.++.+++.++.++..... .+...=++.+.+..+...+.+++++|+++++.|+.
T Consensus 138 ~g~lsD~~GRk~~~~~~~~~~~i~~~~~a~a~~~~----------~~~~~Rfl~G~~~~~~~~~~~~~~~E~~~~~~R~~ 207 (521)
T KOG0255|consen 138 FGPLSDRFGRKPVLLVSLLLFIIFGILTAFAPNYW----------MFLIFRFLSGFFGSGPLTVGFGLVAEIVSPKQRGL 207 (521)
T ss_pred heehHhhcccHHHHHHHHHHHHHHHHHHHHhCcHH----------HHHHHHHHHHhhccchhHHhHhhheeecCcchhhH
Confidence 48999999999999999999999887777765544 22233333344444556778889999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHhhchhhHHHHHHHHHHHHHHHHHhcccCCC
Q 005249 630 CIAICAMAYWICDIIVTYTLPVMLSSIGLAGAFGVYAVVCFISWVFVFLRVPETK 684 (706)
Q Consensus 630 ~~~~~~~~~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~et~ 684 (706)
+..+ ....+.++.+++...+++.. +|+..+++.+...++..++ ++..||.+
T Consensus 208 ~~~~-~~~~~~~~~~~~~~~a~~~~--~Wr~~~~~~~~~~~~~~~~-~~l~~Es~ 258 (521)
T KOG0255|consen 208 ALTL-GGFFFVGGLMLPAGAAYITR--DWRWLFWIISIPSGLFLLL-WFLPPESP 258 (521)
T ss_pred HHHH-HHHHHHHHHHHHHHHHHHHh--hHHHHHHHHHHHHHHHHHH-HHccCcCh
Confidence 9999 99999999999999998887 8998999888888777766 55565754
No 225
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=98.30 E-value=2.1e-06 Score=94.03 Aligned_cols=124 Identities=15% Similarity=0.098 Sum_probs=83.8
Q ss_pred HHHHHhhhcchHHHHhHHHHHHHHHHHHHHHhhhhhhhhhHHHHHHHHHHHHHHHHhhcccccchhhhhcccCCcchhhh
Q 005249 550 AMKLMDVAGRRKLLLTTIPVLIVSLIILVISETLQLISPVLKAGISTACVIIYFCCFVAAYGPIPNILCAEIFPTKVRGI 629 (706)
Q Consensus 550 ~~~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~ 629 (706)
.|.++||+|||+++++++...+++.++.+.+..+. .+...=+...++ =+.-.+..+++.|++++|.|+.
T Consensus 88 ~G~~SD~yGRkpvll~c~~~va~s~ll~~~S~~F~----------afv~aR~l~Gi~-kgnl~v~rAiisdV~sek~r~l 156 (451)
T KOG2615|consen 88 WGCLSDRYGRKPVLLACLIGVALSYLLWALSRNFA----------AFVLARFLGGIF-KGNLSVIRAIISDVVSEKYRPL 156 (451)
T ss_pred hhhhhhhhCchHHHHHHHHHHHHHHHHHHHHHHHH----------HHHHHHHhhhhc-cCchHHHHHHHHhhcChhhccc
Confidence 68999999999999999888888777666543221 111101111222 2233566689999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhHHHHHHH---hhchhhHHH-HHHHH-HHHH-HHHHHhcccCCC
Q 005249 630 CIAICAMAYWICDIIVTYTLPVMLS---SIGLAGAFG-VYAVV-CFIS-WVFVFLRVPETK 684 (706)
Q Consensus 630 ~~~~~~~~~~~~~~i~~~~~~~~~~---~~g~~~~~~-~~~~~-~~~~-~~~~~~~~~et~ 684 (706)
+++..+.+..+|-++||++.|++.. ..|....+. .+.+. ..++ ..++.+++|||-
T Consensus 157 ~ms~v~~a~~lGfilGPmIGgyla~f~~~~g~~p~alP~~~v~i~a~~~v~~~~~~lpETL 217 (451)
T KOG2615|consen 157 GMSLVGTAFGLGFILGPMIGGYLAQFSSISGSYPFALPCLLVFILAAGDVTFFPWFLPETL 217 (451)
T ss_pred eeeeeehhhhcchhhcchhhhHHHhhHhhhccCchHHHHHHHHHHHHHHHHHHHHhCCccc
Confidence 9999999999999999999999877 344332222 12222 1222 344566899993
No 226
>PTZ00207 hypothetical protein; Provisional
Probab=98.29 E-value=2.1e-05 Score=91.77 Aligned_cols=141 Identities=11% Similarity=0.104 Sum_probs=92.1
Q ss_pred hhhHhcHHHHHHhhhh---------------------HHHHHhhhcchHHHHhHHHHHHHHHHHHHHHhhhhhhhhhHHH
Q 005249 534 NGVLYYTPQILEQAGV---------------------AMKLMDVAGRRKLLLTTIPVLIVSLIILVISETLQLISPVLKA 592 (706)
Q Consensus 534 ~~~~~~~~~~~~~~g~---------------------~~~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 592 (706)
+.+..|.+.+.++.|+ +|++.||+|+|++++++.++..++.++.++..... +. ...
T Consensus 44 y~fsv~s~~L~~~lgls~~~l~~i~svg~~~g~~~lp~G~L~Dr~G~R~vllig~ll~~iG~ll~ala~~~~-i~--~s~ 120 (591)
T PTZ00207 44 YAFNLISGAMQARYNLTQRDLSTITTVGIAVGYFLLPYSFIYDYLGPRPIFVLSMTVFCLGTLLFALTFQEV-IE--GSV 120 (591)
T ss_pred HHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHhccc-cc--CcH
Confidence 4555667776655443 88999999999999999999999888877742211 00 011
Q ss_pred HHHHHHHHHHHHHhhcc-cccchhhhhcccCCcchhhhHHHHHHHHHHHHHHHHHhHHHHHHHhhchhhHHHHHHHHHHH
Q 005249 593 GISTACVIIYFCCFVAA-YGPIPNILCAEIFPTKVRGICIAICAMAYWICDIIVTYTLPVMLSSIGLAGAFGVYAVVCFI 671 (706)
Q Consensus 593 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~~~~~ 671 (706)
+ ..++.....+++.+ ..+.....+.+.|| +.||.+.|+......+|+++.+.+...+.. .+|+..|++.+++.++
T Consensus 121 ~--~l~l~r~l~G~G~~~~~~~~~~~i~~~Fp-~~RG~a~Gi~~~~~gLGsaI~~~l~~~l~~-~~~~~~fl~l~vl~~v 196 (591)
T PTZ00207 121 V--RLSVYNGLMTLGCMLFDLGAVVTVLSVFP-SNRGAVVAIMKTFTGLGSAILGSIQLAFFS-DNTSAYFFFLMSFALV 196 (591)
T ss_pred H--HHHHHHHHHHHHHHHHHHHHHHHHHHhCh-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhHHHHHHHHHHHHHH
Confidence 1 11222222222222 22334456778897 569999999999999999876655554444 3577778888888777
Q ss_pred HHHHHHhccc
Q 005249 672 SWVFVFLRVP 681 (706)
Q Consensus 672 ~~~~~~~~~~ 681 (706)
..++.+.+++
T Consensus 197 v~ll~~~~vr 206 (591)
T PTZ00207 197 VGILAIVFMR 206 (591)
T ss_pred HHHHHHhhee
Confidence 7766665554
No 227
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=98.28 E-value=5e-05 Score=86.10 Aligned_cols=141 Identities=18% Similarity=0.181 Sum_probs=110.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHH-cCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhCChHHHHHHHHHHHHHHHHHHhh
Q 005249 13 IGNFLQGWDNATIAGAIVYIKKD-LNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVMLWS 91 (706)
Q Consensus 13 L~~fl~gl~~~iis~~lp~I~q~-fGLS~s~igLl~S~~~Ig~~Igsl~~G~LaDR~GRRrvLlig~iL~aIgsll~a~a 91 (706)
+.+++.....++.+....++.++ +|.+.....+.......+.+++.++...+.+|+|+|+++.++.++..++.++.-+.
T Consensus 243 ~~~l~~~~~~~i~~s~~~yy~~y~lg~~~l~~~~~~~~~~~~~l~~~~~~p~L~~~~gkk~~~~~~~~~~~i~~~~~~f~ 322 (467)
T COG2211 243 LMNLLLFIAFNIRGSIMVYYVTYVLGDPELFAYLLLLASGAGLLIGLILWPRLVKKFGKKKLFLIGLLLLAVGYLLLYFT 322 (467)
T ss_pred HHHHHHHHHHHHHhhhhheeEEEEcCChHHHHHHHHHHHHHHHHHHHHhHHHHHHHhchHHHHHHHHHHHHHHHHHHHhh
Confidence 34445555555555555555443 57777777788888888888889999999999999999999999999999988886
Q ss_pred h--hHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCc-------chhhHHhHHHHHHHHHHHHHHHHHHHHH
Q 005249 92 P--NVYVLCIARLLDGFGVGLAVTLVPLYISETAPS-------EIRGRLNTLPQFTGSGGMFLAYCMVFGM 153 (706)
Q Consensus 92 ~--s~~lLli~R~L~GIg~G~~~~~~~a~IsE~fP~-------k~Rg~a~Gi~~ag~~LG~alg~ll~~~l 153 (706)
+ +.+.+++..++.+++.+...+..+++++|..+- +.-|...+......-+|.+++..+....
T Consensus 323 ~~~~~~l~~~~~~i~~~g~~~~~~l~wam~~d~vDyge~~TG~R~eGi~~s~~tF~~K~g~ala~~~~g~~ 393 (467)
T COG2211 323 PAGSVVLIVVALIIAGVGTGIANPLPWAMVADTVDYGEWKTGVRREGIVYSGMTFFRKLGLALAGFIPGWI 393 (467)
T ss_pred cCcchHHHHHHHHHHHHHhhccccccHHHhcchhhHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5 788888889999999999999999999876553 2237788888888888888886555444
No 228
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=98.24 E-value=8.4e-06 Score=91.16 Aligned_cols=126 Identities=15% Similarity=0.172 Sum_probs=100.5
Q ss_pred HHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhh----hhCChHHHH-HHHHHHHHHHHHHHhhhh-------
Q 005249 26 AGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISD----WLGRRPMLI-LSSVLYFVSGLVMLWSPN------- 93 (706)
Q Consensus 26 s~~lp~I~q~fGLS~s~igLl~S~~~Ig~~Igsl~~G~LaD----R~GRRrvLl-ig~iL~aIgsll~a~a~s------- 93 (706)
-.+.+.+.+.+|++....+.+--+.-+...+.+++.|..+| ||||||.++ ++.+..+++.++..++..
T Consensus 52 lsy~tPyl~~lGvphk~~S~iw~~gPi~G~~vQP~vG~~SDrc~sr~GRRRPfI~~~s~~i~~~l~Lig~aaDig~~lgd 131 (498)
T KOG0637|consen 52 LSYLTPYLQSLGVPHKWSSIIWLCGPLSGLLVQPLVGSASDRCTSRYGRRRPFILAGSLLIAVSLFLIGYAADIGLLLGD 131 (498)
T ss_pred hccccHHHHHcCCCcccccccccccccccceecccccccccccccccccccchHHHhhHHHHHHHhhhhhHhhhhHHhcC
Confidence 34567788999999998888888888888899999999999 589888766 566777777777777543
Q ss_pred ----------HHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCcchhhH-HhHHHHHHHHHHHHHHHHHHH
Q 005249 94 ----------VYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGR-LNTLPQFTGSGGMFLAYCMVF 151 (706)
Q Consensus 94 ----------~~lLli~R~L~GIg~G~~~~~~~a~IsE~fP~k~Rg~-a~Gi~~ag~~LG~alg~ll~~ 151 (706)
..++++.-.+.-++......+.-+++.|....+++.+ +++.+..+..+|..+|+....
T Consensus 132 ~~~~~~~~rai~~~~lg~~LLD~A~n~~qgp~ra~L~Dl~~~d~~~~~Ans~f~~f~avGnvLGY~~g~ 200 (498)
T KOG0637|consen 132 NERKPVKPRAIVLFILGFWLLDVANNTLQGPCRALLADLARGDAKKTRANSVFSFFMAVGNVLGYALGS 200 (498)
T ss_pred CcccccchHHHHHHHHHhHHHHhhhhhhhhhHHHHHHHhccChhhhhccchhHHHHHHhcceeeeeccc
Confidence 2445555666677777788888999999999888888 999999999999999866553
No 229
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=98.18 E-value=1.9e-05 Score=93.02 Aligned_cols=133 Identities=10% Similarity=-0.044 Sum_probs=90.5
Q ss_pred HHHHHhhhcchHHHHhHHHHHHHHHHHHHHHhhhhh---h----------h---------h----------------hH-
Q 005249 550 AMKLMDVAGRRKLLLTTIPVLIVSLIILVISETLQL---I----------S---------P----------------VL- 590 (706)
Q Consensus 550 ~~~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~~~---~----------~---------~----------------~~- 590 (706)
.+++.||.|||+.+.++.++++++.+++++...... . + . ..
T Consensus 88 v~~~~~r~~r~~~i~~g~ll~~lg~ll~alphf~~~~y~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~ 167 (633)
T TIGR00805 88 VSYFGTKLHRPIVIGIGCAIMGLGSFLLSLPHFLSGRYSYSTTVSSTGNLSSANSFLCMENLTQALRPTQCPSECQKQHK 167 (633)
T ss_pred HHHhhcccCcceEEEecHHHHHHHHHHHhChHHhcCCccccccccccccccccccccccCCCCCCccccccccccccccC
Confidence 889999999999999999999999888876531100 0 0 0 00
Q ss_pred -HHHHHHHHHHHHHHHh-hcccccchhhhhcccCCcchhhhHHHHHHHHHHHHHHHHHhHHHHHHHhh------------
Q 005249 591 -KAGISTACVIIYFCCF-VAAYGPIPNILCAEIFPTKVRGICIAICAMAYWICDIIVTYTLPVMLSSI------------ 656 (706)
Q Consensus 591 -~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~~~~i~~~~~~~~~~~~------------ 656 (706)
.....++.+.-++.++ .....++..+++.|.+|++.|+...|+.+....+|..+++.+.+.+.+..
T Consensus 168 ~~~~~~~~~~~r~l~GiG~~~~~~~~~~~i~d~~~~~~~~~~~~i~~~~~~iG~~lG~llgg~l~~~~~d~~~~~~~~~~ 247 (633)
T TIGR00805 168 ESLMWLLFLVSQLLRGIGATPIFPLGISYIDDFAKSKNSPLYIGILESIAVFGPAFGYLLGSFCLQIYVDTGSVNTEDVI 247 (633)
T ss_pred CCceehhhHHHHHHHhccCCcchhcCchhhhccCCccccHHHHHHHHHHHHhhhHHHHHHHHHHHhcccccccCCCCCCC
Confidence 0011111122222222 22344677789999999999999999999999999999999999887643
Q ss_pred ----------chhhHHHHHHHHHHHHHHHHHhcccCC
Q 005249 657 ----------GLAGAFGVYAVVCFISWVFVFLRVPET 683 (706)
Q Consensus 657 ----------g~~~~~~~~~~~~~~~~~~~~~~~~et 683 (706)
+|+..|.+.+++.++..+.. +++|++
T Consensus 248 l~~~dprWiGaWwl~Fli~g~l~~l~~v~l-~~~p~~ 283 (633)
T TIGR00805 248 LTPTDPRWIGAWWIGFLICGGVALLTSIPF-FFFPKA 283 (633)
T ss_pred CCCCCccHHHHHHHHHHHHHHHHHHHHHHH-HhCccc
Confidence 15666777777776666544 445554
No 230
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=98.17 E-value=6.5e-05 Score=88.90 Aligned_cols=154 Identities=14% Similarity=0.168 Sum_probs=120.4
Q ss_pred HHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhhh-hCChHHHHHHHHHHHHHHHHHHhhh--------hHHHH
Q 005249 27 GAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDW-LGRRPMLILSSVLYFVSGLVMLWSP--------NVYVL 97 (706)
Q Consensus 27 ~~lp~I~q~fGLS~s~igLl~S~~~Ig~~Igsl~~G~LaDR-~GRRrvLlig~iL~aIgsll~a~a~--------s~~lL 97 (706)
.+..++...+|++.+....+...+....-+..+++|+++|+ +|+++.+.++.++..++.++.+++. .....
T Consensus 9 iLvlYl~~~lg~~~~~A~~i~~~f~~l~yl~pilGg~iAD~~lG~~~tIl~~~ii~~lG~~llai~a~~~~~~~~~~~~~ 88 (654)
T TIGR00926 9 ILVLYFLNFLGFSESTSTVLFHTFTYLCYLTPLIGAIIADGWLGKFKTILYLSIVYVVGHALLSFGAIPSSGHPLHDLLD 88 (654)
T ss_pred HHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccCcccccchHHHHH
Confidence 34456677899999999888888888888899999999997 6999999999999999998887642 12345
Q ss_pred HHHHHHHHHHHHhHHHHHHHHHHhcCCcc---hhhHHhHHHHHHHHHHHHHHHHHHHHHHHh-----ccchhhHHHHHHH
Q 005249 98 CIARLLDGFGVGLAVTLVPLYISETAPSE---IRGRLNTLPQFTGSGGMFLAYCMVFGMSLL-----ASPSWRLMLGVLS 169 (706)
Q Consensus 98 li~R~L~GIg~G~~~~~~~a~IsE~fP~k---~Rg~a~Gi~~ag~~LG~alg~ll~~~l~l~-----~~~GWR~~FlI~a 169 (706)
+++-++..+|.|+.-+...+...|.++++ +|-....++..+.++|++++..+....... ...+|...|.+.+
T Consensus 89 l~gLaLia~G~GgiKp~vsaf~gdqf~~~~~~~~~s~F~~fY~~iNiGSlis~~i~~~l~~~~~~fg~~~~~~~aF~i~~ 168 (654)
T TIGR00926 89 LLGLALIALGTGGIKPCVSAFGGDQFEERQLSLRSRFFSFFYFAINAGSLISTIITPILRGDVGCFGCQDCYPLAFGVPA 168 (654)
T ss_pred HHHHHHHHhhccccccCchhhhHhhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcchHHHHHHHH
Confidence 67788888999999999999999999864 356678888888899988885555443211 1347999999988
Q ss_pred HHHHHHHHHHH
Q 005249 170 IPALLYFAFAV 180 (706)
Q Consensus 170 il~LV~~ll~~ 180 (706)
+..++.+++..
T Consensus 169 i~m~ia~lvf~ 179 (654)
T TIGR00926 169 ILMILALIVFM 179 (654)
T ss_pred HHHHHHHHHHH
Confidence 88877665543
No 231
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=98.17 E-value=0.00014 Score=80.93 Aligned_cols=143 Identities=6% Similarity=-0.123 Sum_probs=100.1
Q ss_pred HHHHHHHHHHc--CCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhCChHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHH
Q 005249 26 AGAIVYIKKDL--NLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVMLWSPNVYVLCIARLL 103 (706)
Q Consensus 26 s~~lp~I~q~f--GLS~s~igLl~S~~~Ig~~Igsl~~G~LaDR~GRRrvLlig~iL~aIgsll~a~a~s~~lLli~R~L 103 (706)
...++.+.++. +.+....+...+.+..+..++.++++++.||+++|+++.++.++.++..++..+.++... ..+-++
T Consensus 252 ~s~l~~y~~~~~~~~~~~~a~~~~~~~~~~~~vGR~~~~~l~~r~~~~~~l~i~~~~~~~~~ll~~~~~~~~~-~~~l~~ 330 (410)
T TIGR00885 252 WTFIIQYAVRLIPGMTAGFAANYNIGAMVIFFISRFIGTWLISYLAAHKVLMAYAIIGMALCLGSIFAGGHVG-LYCLTL 330 (410)
T ss_pred HHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHcCChHH-HHHHHH
Confidence 34445554544 445555566777777889999999999999999999999999998888888888776543 567788
Q ss_pred HHHHHHhHHHHHHHHHHhcCCcchhhHHhHHHHHHHHHHHHHHHHHHHHHHHhc---cc-hhhHHHHHHHHH
Q 005249 104 DGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLA---SP-SWRLMLGVLSIP 171 (706)
Q Consensus 104 ~GIg~G~~~~~~~a~IsE~fP~k~Rg~a~Gi~~ag~~LG~alg~ll~~~l~l~~---~~-GWR~~FlI~ail 171 (706)
.|++.+..+|...+...+..+++.+.-+.++ .++ .+|.++.|.+........ .. +.+..|++..+.
T Consensus 331 ~glf~s~~fp~i~sl~~~~~g~~~~~~s~~l-~~~-~~Gga~~p~l~G~~~d~~~~~~~~~~~~~~~~~~~~ 400 (410)
T TIGR00885 331 CSAFMSLMFPTIYGIALKGLGQDTKYGAAGL-VMA-IIGGGIVPPLQGFIIDMKEIAAAPAVNTSFILPLLC 400 (410)
T ss_pred HHHHHHHHHHHHHHHHHhhhhhhhhhhHHHH-HHH-HhccchHHHHHHHHHHHhcccccCccchHHHHHHHH
Confidence 8899999999999999999986654333333 333 388888755544433211 11 466777654443
No 232
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=98.16 E-value=0.0023 Score=71.57 Aligned_cols=135 Identities=13% Similarity=0.137 Sum_probs=98.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhCChHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCC
Q 005249 45 LVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVMLWSPNVYVLCIARLLDGFGVGLAVTLVPLYISETAP 124 (706)
Q Consensus 45 Ll~S~~~Ig~~Igsl~~G~LaDR~GRRrvLlig~iL~aIgsll~a~a~s~~lLli~R~L~GIg~G~~~~~~~a~IsE~fP 124 (706)
.+.-+-.+.+.+..+.+.++.+|+..+.=+.++.++..++.++.+++++.+.-+++-++.+++.|........+.. .++
T Consensus 63 ~Vlladi~P~l~~Kl~aP~fi~~v~y~~Ri~~~~~l~~~g~l~va~~~~v~~~l~Gv~las~ssg~GE~tfL~lt~-~y~ 141 (402)
T PF02487_consen 63 AVLLADILPSLLVKLIAPFFIHRVPYWIRILICVALSAAGMLLVAFSPSVWVRLLGVVLASLSSGLGEVTFLSLTH-FYG 141 (402)
T ss_pred HHHHHHHHHHHHHHHHhHhhhhhccchHHHHHHHHHHHHHHhheeeccchhHHHHHHHHHhhhhhhhHHHHHHHHH-hcC
Confidence 3445555677777788889999998776666777888899999999999999999999999999998887777644 665
Q ss_pred cchhhHHhHHHHHHHHHHHHHHHHHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHhhccC
Q 005249 125 SEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSWRLMLGVLSIPALLYFAFAVFFLPE 185 (706)
Q Consensus 125 ~k~Rg~a~Gi~~ag~~LG~alg~ll~~~l~l~~~~GWR~~FlI~ail~LV~~ll~~lflpE 185 (706)
+ ...+-+.++.+.+.++|++....... ....-|..+++...+.++.++..++.+|.
T Consensus 142 ~----~~l~~wssGTG~aGl~Ga~~y~~lT~-~g~s~~~tll~~~~lp~~~~~~~f~~L~~ 197 (402)
T PF02487_consen 142 K----SSLSAWSSGTGGAGLVGALYYLGLTT-LGLSPRTTLLIMLVLPAIFLLSYFFLLPS 197 (402)
T ss_pred c----cccccccCCcChhhHHHHHHHHHHHH-hCcCHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 4 35677788888888888665544433 33455777777777666544444444444
No 233
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.10 E-value=3.9e-05 Score=87.37 Aligned_cols=147 Identities=15% Similarity=0.131 Sum_probs=108.7
Q ss_pred HHHHHhhhcchHHHHhHHHHHHHHHHHHHHHhhhhhhhhhHHHHHHHHHHHHHHHHhhcccccchhhhhcccCCcchhhh
Q 005249 550 AMKLMDVAGRRKLLLTTIPVLIVSLIILVISETLQLISPVLKAGISTACVIIYFCCFVAAYGPIPNILCAEIFPTKVRGI 629 (706)
Q Consensus 550 ~~~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~ 629 (706)
++++.||+|-|+++..+..+.+++.++..+..... .+..+++=++-+.+.+ ...|....+++...|++.|++
T Consensus 93 ~g~l~~k~G~r~v~~~~~~~sa~~t~l~P~aa~~~-------~~~~~~~R~lqGl~~g-~~~pa~~~i~~~W~P~~Ers~ 164 (466)
T KOG2532|consen 93 GGYLADKFGARRVFFISGLISALLTLLTPLAASIG-------FYLLLVLRFLQGLGQG-VLFPAIGSILAKWAPPNERST 164 (466)
T ss_pred cHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHhc-------chhhHHHHHHhHHHHh-HHHhhhhceeeeECCHHHHHH
Confidence 58999999999999999888888888777655443 1222222222222222 234666678889999999999
Q ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHh-hchhhHHHHHHHHHHHHHHHHHhcccC----CCCCChHHHHHHHHcCcccccc
Q 005249 630 CIAICAMAYWICDIIVTYTLPVMLSS-IGLAGAFGVYAVVCFISWVFVFLRVPE----TKGMPLEVITEFFAVGARQATK 704 (706)
Q Consensus 630 ~~~~~~~~~~~~~~i~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~e----t~~~~~~~~~~~~~~~~~~~~~ 704 (706)
..++..+...+|.+++..+.|.+.++ .||...|.+.++++++..++.+++..+ .+..+.+|.+..-+...+++.+
T Consensus 165 ~~ail~~g~q~g~v~~mp~sg~lc~s~~GW~sifY~~g~~g~i~~~~w~~~~~d~P~~h~~is~~El~~I~~~k~~~~~~ 244 (466)
T KOG2532|consen 165 FIAILTAGSQLGTIITMPVSGLLCESSLGWPSIFYVFGIVGLIWFILWFLFYSDSPSKHPNISEKELKYIEKGKSEAHVK 244 (466)
T ss_pred HHHHHHHHHHHHHHHHHHhHHHHhccCCCCchHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCHHHHHHHHhcccccccC
Confidence 99999999999999999999999999 999999999999998888777665543 2445556666655555544443
No 234
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=98.10 E-value=0.00031 Score=77.09 Aligned_cols=164 Identities=20% Similarity=0.188 Sum_probs=121.1
Q ss_pred HHHHHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhh-CChHHHHHHHHHHHHHHHHHHhhhhHHHH
Q 005249 19 GWDNATIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWL-GRRPMLILSSVLYFVSGLVMLWSPNVYVL 97 (706)
Q Consensus 19 gl~~~iis~~lp~I~q~fGLS~s~igLl~S~~~Ig~~Igsl~~G~LaDR~-GRRrvLlig~iL~aIgsll~a~a~s~~lL 97 (706)
....+..-..+|.+..|-|+|..+.|++.++..+..+..++....+++|. .+|+..+....++.++.+.+.+.+.-..+
T Consensus 221 S~~~Y~~~~WLP~ili~~G~sa~~aG~llsl~~l~~~~~~ll~P~la~R~~n~r~~~~~~~~~~l~G~~G~~~~P~~~~~ 300 (395)
T COG2807 221 SLLYYIVIGWLPAILIDRGLSAAEAGSLLSLMQLAQLPTALLIPLLARRSKNQRPLVVLALLLMLVGLVGLLLAPGQLPI 300 (395)
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHhhhHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHhhhhHHH
Confidence 33444455677999999999999999999999999999999999999965 57777778888888888877776644333
Q ss_pred HHHHHHHHHHHHhHHHHHHHHHHhcCCcc-hhhHHhHHHHHHHHHHHHHHHHHHHHHHHhccchhhHHHHHHHHHHHHHH
Q 005249 98 CIARLLDGFGVGLAVTLVPLYISETAPSE-IRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSWRLMLGVLSIPALLYF 176 (706)
Q Consensus 98 li~R~L~GIg~G~~~~~~~a~IsE~fP~k-~Rg~a~Gi~~ag~~LG~alg~ll~~~l~l~~~~GWR~~FlI~ail~LV~~ 176 (706)
.. -++.|+|.|..++.+...+..-.+.. +-+...++.|....+=.++||...... .....+|+..++..+...++..
T Consensus 301 lw-~~llG~G~G~~F~laL~li~~rs~~a~~Aa~LSgmaQg~GYllAa~GP~l~G~l-hDa~gsw~~~~~~l~~~~i~m~ 378 (395)
T COG2807 301 LW-ALLLGLGQGGAFPLALTLILLRSSDAAIAAALSGMAQGVGYLLAAFGPWLFGFL-HDATGSWSAPLVLLALATLLML 378 (395)
T ss_pred HH-HHHHhCccchHHHHHHHHHHhhcCChHHHHHHHHHhhhhhHHHHhhhhhhHhHH-HHhcCChHHHHHHHHHHHHHHH
Confidence 33 49999999999999999998877654 345566666666555556664443333 2334589998888887777766
Q ss_pred HHHHhhcc
Q 005249 177 AFAVFFLP 184 (706)
Q Consensus 177 ll~~lflp 184 (706)
+..+..-|
T Consensus 379 i~Gl~a~r 386 (395)
T COG2807 379 IFGLRAGR 386 (395)
T ss_pred HHHhhcch
Confidence 55544433
No 235
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=98.09 E-value=3.3e-05 Score=87.52 Aligned_cols=120 Identities=13% Similarity=0.067 Sum_probs=103.5
Q ss_pred HHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhCChHHHHHHHHHHHHHHHHHHhh----------hhHHHHHHHHHH
Q 005249 34 KDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVMLWS----------PNVYVLCIARLL 103 (706)
Q Consensus 34 q~fGLS~s~igLl~S~~~Ig~~Igsl~~G~LaDR~GRRrvLlig~iL~aIgsll~a~a----------~s~~lLli~R~L 103 (706)
+.+|.++.+.|++.....++.+++....+++.+|++.|+++.++.++.+++.+..... ++.+.++..-++
T Consensus 281 ~~lG~s~~~~G~~~~~~~v~~i~g~~~~~~~~~~~~~r~~l~~~~~l~~~~~~~~~~l~~~~~~~~gi~~~~~~~~~~~l 360 (468)
T TIGR00788 281 QCLPGGPSFSGMSKVVGNLGSLCGVGGYDRFLKTFPYRLLFGVTTLLYTLSSLFDLILVKRWNLAFGISDEVFVLGDSII 360 (468)
T ss_pred ccCCCCcchhhhHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHhCceeeeeccccccCCCCeeeeeehhHH
Confidence 4689999999999999999999999999999999999999999999998887654311 333455566789
Q ss_pred HHHHHHhHHHHHHHHHHhcCCcchhhHHhHHHHHHHHHHHHHHHHHHHHH
Q 005249 104 DGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGM 153 (706)
Q Consensus 104 ~GIg~G~~~~~~~a~IsE~fP~k~Rg~a~Gi~~ag~~LG~alg~ll~~~l 153 (706)
.+++.+..+.+...++++..|++.++...++.++..++|..+++......
T Consensus 361 ~~~~~g~~~~~~~~~~~~~~p~~~egt~~al~~s~~~lg~~v~~~~gg~l 410 (468)
T TIGR00788 361 AEVLAQLKFMPFLVLLARLCPSGCESSVFALLASILHLGSSVSGFLGVLL 410 (468)
T ss_pred HHHHHHHHHccHHHHHHHhCCCCceehHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999997555444
No 236
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=98.06 E-value=2.8e-05 Score=68.62 Aligned_cols=81 Identities=12% Similarity=0.147 Sum_probs=76.0
Q ss_pred HHHHHHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhCChHHHHHHHHHHHHHHHHHHhhhhHHHH
Q 005249 18 QGWDNATIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVMLWSPNVYVL 97 (706)
Q Consensus 18 ~gl~~~iis~~lp~I~q~fGLS~s~igLl~S~~~Ig~~Igsl~~G~LaDR~GRRrvLlig~iL~aIgsll~a~a~s~~lL 97 (706)
.++.+..+.|.+|.+.++.++|.++.+++.+..++||.+|.+...++.++..+++.+..+.++..+..+.+++.++++.+
T Consensus 4 mGigRFayTplLP~M~~~~~ls~~~ag~lasaNy~GYL~GAl~~~~~~~~~~~~~~~~~~l~~~~~~~~~ma~~~~~~~w 83 (85)
T PF06779_consen 4 MGIGRFAYTPLLPLMQADGGLSLSQAGWLASANYLGYLVGALLASRLPRHSRPRRLLRAGLLLTVLSTAAMALTHSFWLW 83 (85)
T ss_pred hhhHHHHHHhHhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHhchHHH
Confidence 57889999999999999999999999999999999999999999999999889999999999999999999999887765
Q ss_pred H
Q 005249 98 C 98 (706)
Q Consensus 98 l 98 (706)
.
T Consensus 84 ~ 84 (85)
T PF06779_consen 84 S 84 (85)
T ss_pred h
Confidence 4
No 237
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.06 E-value=0.00081 Score=76.39 Aligned_cols=105 Identities=23% Similarity=0.270 Sum_probs=92.3
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhCChHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCcc
Q 005249 47 VAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVMLWSPNVYVLCIARLLDGFGVGLAVTLVPLYISETAPSE 126 (706)
Q Consensus 47 ~S~~~Ig~~Igsl~~G~LaDR~GRRrvLlig~iL~aIgsll~a~a~s~~lLli~R~L~GIg~G~~~~~~~a~IsE~fP~k 126 (706)
.++.+..+.+++++++.+.|+.|.|+.++++...+.+..+.+.+ +|-+.++++-.+.|+|.+..+..--.|++|..+++
T Consensus 56 ~aiiY~~ftv~~l~~psiv~~i~~K~~lv~ga~~y~~f~~gfl~-~N~y~~yfssallG~Gaallw~GqG~ylt~~st~~ 134 (461)
T KOG3098|consen 56 QAIIYAFFTVSCLFAPSIVNFLGPKWALVIGATCYAAFPLGFLF-PNSYYLYFSSALLGFGAALLWTGQGGYLTSNSTRE 134 (461)
T ss_pred HHHHHHHHHHHHHhhHHHHHHhhHHHHHHHHhHHHHHHHHHHHh-cchHHHHHHHHHhhhhHHheecccceehhhcCChh
Confidence 77788889999999999999999999999999999888877766 45677788999999999999999999999999999
Q ss_pred hhhHHhHHHHHHHHHHHHHHHHHHHH
Q 005249 127 IRGRLNTLPQFTGSGGMFLAYCMVFG 152 (706)
Q Consensus 127 ~Rg~a~Gi~~ag~~LG~alg~ll~~~ 152 (706)
.+.+..++.-+....+.++|.+....
T Consensus 135 tie~Nisi~Wai~~~~li~Ggi~l~~ 160 (461)
T KOG3098|consen 135 TIERNISIFWAIGQSSLIIGGIILFI 160 (461)
T ss_pred hHHHHHHHHHHHHHHHHHhhhHhhee
Confidence 99999999888888888888555443
No 238
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=98.06 E-value=0.00033 Score=80.06 Aligned_cols=143 Identities=8% Similarity=-0.032 Sum_probs=111.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhCC-hHHHHHHHHHHHHHHHHHHhhhh---------------------HHHHHHHHH
Q 005249 45 LVVAMSLIGATAITTCSGPISDWLGR-RPMLILSSVLYFVSGLVMLWSPN---------------------VYVLCIARL 102 (706)
Q Consensus 45 Ll~S~~~Ig~~Igsl~~G~LaDR~GR-RrvLlig~iL~aIgsll~a~a~s---------------------~~lLli~R~ 102 (706)
+....+.+...+.+++.-.+.+++|+ |++..++.++.+++.+...+.++ .+..++...
T Consensus 309 ~~l~~~s~~~~i~s~~l~~l~~~~g~~k~~~~~s~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 388 (477)
T TIGR01301 309 FGLMLNSVVLGITSIGMEKLCRGWGAGKRLWGIVNIILAICLAATVLVTYVAKNSRYYDGDGESLPPPTGIKASALIVFA 388 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHHhhhhccccccccccccCcchhhHHHHHHHHH
Confidence 34445555556777788889999995 77778898888888877765443 367778889
Q ss_pred HHHHHHHhHHHHHHHHHHhcCCc--chhhHHhHHHHHHHHHHHHHHHHHHHHHHHhccchhhHHHHHHHHHHHHHHHHHH
Q 005249 103 LDGFGVGLAVTLVPLYISETAPS--EIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSWRLMLGVLSIPALLYFAFAV 180 (706)
Q Consensus 103 L~GIg~G~~~~~~~a~IsE~fP~--k~Rg~a~Gi~~ag~~LG~alg~ll~~~l~l~~~~GWR~~FlI~ail~LV~~ll~~ 180 (706)
+.|+..+..+...++++++..++ ++.|..+|+++.+..+.+++..+...........+-..++.+.++..++.+++.+
T Consensus 389 ~~Gi~~A~~~siPfal~s~~~~~~~~~~G~~mgilN~~I~lpQii~sl~~g~~~~~~g~~~~~~~~~~gv~~~~aa~~~~ 468 (477)
T TIGR01301 389 ILGIPLAITYSIPFALASIRSSNLGAGQGLSMGVLNLAIVIPQIIVSLGSGPWDQLFGGGNLPAFVVGAVAAFVSGLLAL 468 (477)
T ss_pred HhhHHHHHHHHHhHHHHHHHccccCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHcCCCCeeHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999995 4559999999999999999987644442222222446688888999999888888
Q ss_pred hhccCCc
Q 005249 181 FFLPESP 187 (706)
Q Consensus 181 lflpEsp 187 (706)
+.+|.+|
T Consensus 469 ~~~~~~~ 475 (477)
T TIGR01301 469 ILLPRPR 475 (477)
T ss_pred HhCCCCC
Confidence 8888764
No 239
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=98.05 E-value=0.00012 Score=83.25 Aligned_cols=120 Identities=13% Similarity=0.120 Sum_probs=87.2
Q ss_pred HHHHHhhhcchHHHHhHHHHHHHHHHHHHHHhhhhhhhhhHHHHHHHHHHHHHHHHhhcccccchhhhhcccCCcchhhh
Q 005249 550 AMKLMDVAGRRKLLLTTIPVLIVSLIILVISETLQLISPVLKAGISTACVIIYFCCFVAAYGPIPNILCAEIFPTKVRGI 629 (706)
Q Consensus 550 ~~~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~ 629 (706)
.++++||+|-|+++.++.++-++..++.++..... ...++-++++.+-+..+ ..+.++...+|++.|++
T Consensus 82 ~GlLaDrlG~K~vL~l~~l~Wsl~t~L~~fa~Sl~---------~L~i~R~llGvaEA~~~--A~~syI~~WfP~kER~r 150 (511)
T TIGR00806 82 VFLLTDYLRYKPVLVLQALSFVCVWLLLLLGTSVW---------HMQLMEVFYSVTMAARI--AYSSYIFSLVPPSRYQR 150 (511)
T ss_pred HHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHH---------HHHHHHHHHHHHHHHHH--HHHHHHHHHCCHHHHHH
Confidence 89999999999999999888888888777643322 23333444444433333 56678889999999999
Q ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHhhchhhHHHH--HHHHHHHHHHHHHhccc
Q 005249 630 CIAICAMAYWICDIIVTYTLPVMLSSIGLAGAFGV--YAVVCFISWVFVFLRVP 681 (706)
Q Consensus 630 ~~~~~~~~~~~~~~i~~~~~~~~~~~~g~~~~~~~--~~~~~~~~~~~~~~~~~ 681 (706)
++|+++....+|.++++.+.+. +...||+..+-+ ....+.+...+..+++|
T Consensus 151 atsi~~sg~~vG~~Ia~~L~ql-l~s~gWr~y~~Ln~Isl~s~~~a~~~a~~LP 203 (511)
T TIGR00806 151 AAAYSRAAVLLGVFLSSVLGQL-LVTLGWISYSTLNIISLVFMTFSVFLALFLK 203 (511)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH-HHhcCchhHHHHHHHHHHHHHHHHHHHHhCC
Confidence 9999999999999999999999 667898865543 23333344444445566
No 240
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=98.04 E-value=1.2e-06 Score=97.86 Aligned_cols=127 Identities=22% Similarity=0.141 Sum_probs=104.6
Q ss_pred HHHHHhhhcchHHHHhHHHHHHHHHHHHHHHhhhhhhhhhHHHHHHHHHHHHHHHHhhcccccchhhhhcccCCcchhhh
Q 005249 550 AMKLMDVAGRRKLLLTTIPVLIVSLIILVISETLQLISPVLKAGISTACVIIYFCCFVAAYGPIPNILCAEIFPTKVRGI 629 (706)
Q Consensus 550 ~~~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~ 629 (706)
.|++.||+.|+.++.+++++-.++.++-.++..++ .++..=.+...--+.+.|+...++++.||...|++
T Consensus 88 ~gyLadryNR~~v~~vG~~iW~~Av~~~~fs~~Fw----------q~~l~R~~vGiGeAs~~~ia~s~IaD~f~~~~Rs~ 157 (493)
T KOG1330|consen 88 FGYLADRYNRKRVIAVGIFIWTLAVFASGFSNHFW----------QVLLCRGFVGIGEASYSPIAPSLIADSFPDDKRSR 157 (493)
T ss_pred HHHHHhhcCcceEEeeHHHHHHHHHHHHHHHHHHH----------HHHHHHHHhccchhhhcccchhHhhhcCcchhhhH
Confidence 89999999999999999988888888777764333 22222333333345677888999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHhhc-hhhHHHHHHHHHHHHHHHHHhcccCCCCC
Q 005249 630 CIAICAMAYWICDIIVTYTLPVMLSSIG-LAGAFGVYAVVCFISWVFVFLRVPETKGM 686 (706)
Q Consensus 630 ~~~~~~~~~~~~~~i~~~~~~~~~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~et~~~ 686 (706)
..++.+++..+|.++|-+....+.+..+ |+++|.+.+++.++..++.+++++|....
T Consensus 158 ~~~ify~~ipvGsglG~vvgs~va~~~~~Wr~af~~~avl~vi~~~L~~~f~~eP~rg 215 (493)
T KOG1330|consen 158 VLGIFYFAIPVGSGLGYVVGSVVASLTFWWRWAFRGSAVLGVIVGLLVFLFVREPERG 215 (493)
T ss_pred HHHHhhhhcccccceeEEeeeeeccCccceEEEEEeehHHHHHHHHHHHhhccCcccc
Confidence 9999999999999999888888888877 99999999999999999998888876543
No 241
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=98.02 E-value=1.1e-05 Score=89.10 Aligned_cols=128 Identities=16% Similarity=0.157 Sum_probs=101.7
Q ss_pred HHHHHhhhcchHHHHhHHHHHHHHHHHHHHHhhhhhhhhhHHHHHHHHHHHHHHHHhhcccccchhhhhcccCCcch-hh
Q 005249 550 AMKLMDVAGRRKLLLTTIPVLIVSLIILVISETLQLISPVLKAGISTACVIIYFCCFVAAYGPIPNILCAEIFPTKV-RG 628 (706)
Q Consensus 550 ~~~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~-r~ 628 (706)
.|.+.||+|+|..++++++++..+.+++++...++ ..++.=.+=..+..+ ......+++++.||.++ |+
T Consensus 126 ~G~l~~~iGy~ipm~~Gl~vmf~sTilFafg~sy~---------~l~vAR~LQgvgsA~-~~tsglamlAd~f~~d~er~ 195 (464)
T KOG3764|consen 126 FGNLIDRIGYKIPMVAGLFVMFLSTILFAFGNSYP---------MLFVARSLQGVGSAF-ADTSGLAMLADVFPEDNERG 195 (464)
T ss_pred chhhHHHhccccHHHHHHHHHHHHHHHHHHcchhH---------HHHHHHHHhhhhHHH-HHhhhHHHHHHHcccchhhh
Confidence 68999999999999999999999999988865544 111111111111111 12234468889999876 69
Q ss_pred hHHHHHHHHHHHHHHHHHhHHHHHHHhhchhhHHHHHHHHHHHHHHHHHhcccCCCCCC
Q 005249 629 ICIAICAMAYWICDIIVTYTLPVMLSSIGLAGAFGVYAVVCFISWVFVFLRVPETKGMP 687 (706)
Q Consensus 629 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~et~~~~ 687 (706)
.++|+.-.+..+|.+++|.+.|++.+..|...+|.+++.++++-..+.++.++.++..+
T Consensus 196 ~vmGialgfislG~lvgPpfGGilYe~~Gk~aPFlVL~~v~Lld~~L~l~vi~p~~~~~ 254 (464)
T KOG3764|consen 196 SVMGIALGFISLGVLVGPPFGGILYEFAGKSAPFLVLAIVLLLDGALQLLVIEPTEMDP 254 (464)
T ss_pred HHHHHHHHHHhccceecCCcccchHhhcCCcCcHHHHHHHHHHHHHHHHheeCccccCc
Confidence 99999999999999999999999999999999999999999999999998888776655
No 242
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=98.01 E-value=0.00028 Score=69.13 Aligned_cols=108 Identities=22% Similarity=0.226 Sum_probs=92.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhCChHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCC
Q 005249 45 LVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVMLWSPNVYVLCIARLLDGFGVGLAVTLVPLYISETAP 124 (706)
Q Consensus 45 Ll~S~~~Ig~~Igsl~~G~LaDR~GRRrvLlig~iL~aIgsll~a~a~s~~lLli~R~L~GIg~G~~~~~~~a~IsE~fP 124 (706)
.-.++......+++++.+.+.+++|.|+.++++.+++.+-.... +-++.+.++.+-++.|++.+..++....++.+...
T Consensus 41 ~slai~Y~~~~~s~l~~P~iv~~lg~K~sm~lg~~~y~~y~~~~-~~~~~~~l~~~s~l~G~~~a~lW~aqg~ylt~~s~ 119 (156)
T PF05978_consen 41 YSLAILYGSFAISCLFAPSIVNKLGPKWSMILGSLGYAIYIASF-FYPNSYTLYPASALLGFGAALLWTAQGTYLTSYST 119 (156)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHHHHH-HhhhHHHHHHHHHHHhhhhHHhhHhhhHHHHHcCC
Confidence 44566677788888999999999999999999999998666655 45678889999999999999999999999999999
Q ss_pred cchhhHHhHHHHHHHHHHHHHHHHHHHHH
Q 005249 125 SEIRGRLNTLPQFTGSGGMFLAYCMVFGM 153 (706)
Q Consensus 125 ~k~Rg~a~Gi~~ag~~LG~alg~ll~~~l 153 (706)
++.|++-.+++-.....+.++|.+.....
T Consensus 120 ~~~~~~~~~ifw~i~~~s~i~G~~~~~~~ 148 (156)
T PF05978_consen 120 EETIGRNTGIFWAIFQSSLIFGNLFLFFI 148 (156)
T ss_pred HHHHhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999998888888888886655444
No 243
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=98.01 E-value=8e-05 Score=84.94 Aligned_cols=119 Identities=8% Similarity=0.169 Sum_probs=91.4
Q ss_pred HHHHHhhhcchHHHHhHHHHHHHHHHHHHHHhhhhhhhhhHHHHHHHHHHHHHHHHhhcccccchhhhhcccCCcchhhh
Q 005249 550 AMKLMDVAGRRKLLLTTIPVLIVSLIILVISETLQLISPVLKAGISTACVIIYFCCFVAAYGPIPNILCAEIFPTKVRGI 629 (706)
Q Consensus 550 ~~~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~ 629 (706)
..+|..|+|+-+++..+..+..+=++.+.... +.|..+..-++=...+++.|.++. .|+..+.|++.|.+
T Consensus 426 s~klI~kiGHv~v~~lgLa~~~~Rf~~~S~L~---------n~W~vLPieilqgit~aliWaa~~-sY~s~vaPp~l~at 495 (618)
T KOG3762|consen 426 SFKLIEKIGHVNVMYLGLACNVGRFLYYSYLQ---------NPWMVLPIEILQGITHALIWAAII-SYASHVAPPGLRAT 495 (618)
T ss_pred HHHHHHHhcccceeeehhhHHHHHHHHHHHhc---------CchheeeHHHHHHHHHHHHHHHHH-HHHHhhCCCcchHH
Confidence 88999999999998888777766666554432 244555555555555555555544 47888999999999
Q ss_pred HHHHHHHH-HHHHHHHHHhHHHHHHHhhchhhHHHHHHHHHHHHHHHHHh
Q 005249 630 CIAICAMA-YWICDIIVTYTLPVMLSSIGLAGAFGVYAVVCFISWVFVFL 678 (706)
Q Consensus 630 ~~~~~~~~-~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 678 (706)
+-++.... ..+|-.+|.+|.|.+...+|-+..|.++++.|++.+++...
T Consensus 496 ~Q~l~~g~f~GlG~g~GslIGG~~v~~fg~~ttf~~~giAcl~~l~~~~~ 545 (618)
T KOG3762|consen 496 AQGLLQGIFHGLGKGLGSLIGGFVVERFGARTTFRIFGIACLVTLALFIS 545 (618)
T ss_pred HHHHHHHHhcccCcchhhhhhhhhheeehhHHHHHHHHHHHHHHHHHHHH
Confidence 99987654 67888999999999999999999999999988887766543
No 244
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=97.95 E-value=5.2e-05 Score=86.43 Aligned_cols=160 Identities=18% Similarity=0.125 Sum_probs=129.7
Q ss_pred HHHHHHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhCChHHHHHHHHHHHHHHHHHHhhhhHHHH
Q 005249 18 QGWDNATIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVMLWSPNVYVL 97 (706)
Q Consensus 18 ~gl~~~iis~~lp~I~q~fGLS~s~igLl~S~~~Ig~~Igsl~~G~LaDR~GRRrvLlig~iL~aIgsll~a~a~s~~lL 97 (706)
.+.....+-.++=.-.++++-...-.|........+-++.-++.+++..|+|+-+++.+++.+..+=.+...+..|.|+.
T Consensus 383 mG~g~~lv~tFLfWHled~~~~~~LfGv~~a~~~~gEI~~~ffs~klI~kiGHv~v~~lgLa~~~~Rf~~~S~L~n~W~v 462 (618)
T KOG3762|consen 383 MGAGVGLVFTFLFWHLEDLGGIKTLFGVVSALCHAGEILFYFFSFKLIEKIGHVNVMYLGLACNVGRFLYYSYLQNPWMV 462 (618)
T ss_pred HHHHHHHHHHHHHHHHhhcCCcceeeeehhhhhccchHHHHHHHHHHHHHhcccceeeehhhHHHHHHHHHHHhcCchhe
Confidence 34444444444445678888888888877777888888899999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhHHHHHHHHHHhcCCcchhhHHhHHHHHH-HHHHHHHHHHHHHHHHHhccchhhHHHHHHHHHHHHHH
Q 005249 98 CIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFT-GSGGMFLAYCMVFGMSLLASPSWRLMLGVLSIPALLYF 176 (706)
Q Consensus 98 li~R~L~GIg~G~~~~~~~a~IsE~fP~k~Rg~a~Gi~~ag-~~LG~alg~ll~~~l~l~~~~GWR~~FlI~ail~LV~~ 176 (706)
+..-+++|+..+..+.+..+|++...|++.|..+.++.+.. .++|--+|.++... .....+-|..|.++++.+++.+
T Consensus 463 LPieilqgit~aliWaa~~sY~s~vaPp~l~at~Q~l~~g~f~GlG~g~GslIGG~--~v~~fg~~ttf~~~giAcl~~l 540 (618)
T KOG3762|consen 463 LPIEILQGITHALIWAAIISYASHVAPPGLRATAQGLLQGIFHGLGKGLGSLIGGF--VVERFGARTTFRIFGIACLVTL 540 (618)
T ss_pred eeHHHHHHHHHHHHHHHHHHHHHhhCCCcchHHHHHHHHHHhcccCcchhhhhhhh--hheeehhHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999987654 45555555433332 2345688899999998888866
Q ss_pred HHH
Q 005249 177 AFA 179 (706)
Q Consensus 177 ll~ 179 (706)
++.
T Consensus 541 ~~~ 543 (618)
T KOG3762|consen 541 ALF 543 (618)
T ss_pred HHH
Confidence 543
No 245
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=97.89 E-value=4.1e-08 Score=108.47 Aligned_cols=164 Identities=21% Similarity=0.148 Sum_probs=106.9
Q ss_pred HHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhCChHHHHHHHHHHHHHHHHHH--h---hhh----HHH
Q 005249 26 AGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVML--W---SPN----VYV 96 (706)
Q Consensus 26 s~~lp~I~q~fGLS~s~igLl~S~~~Ig~~Igsl~~G~LaDR~GRRrvLlig~iL~aIgsll~a--~---a~s----~~l 96 (706)
....+.+.+..+.+.. -+......+...++.+++..+.||+|||++++.+.++.+++.++++ . .++ -..
T Consensus 273 ~~~~~~i~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~GRr~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 350 (451)
T PF00083_consen 273 FYYSPSIFENAGISNS--FLATLILGLVNFLGTLLAIFLIDRFGRRKLLIIGLLLMAICSLILGIIFFLGVSSSSWWSIL 350 (451)
T ss_pred cccccccccccccccc--cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 3445677777787776 2223334455566777777999999999999999988888877764 1 111 111
Q ss_pred HHHHHHHHHHHHH-hHHHHHHHHHHhcCCcchhhHHhHHHHHHHHHHHHHHHHHHHHHHHhccchhhHHHHHHHHHHHHH
Q 005249 97 LCIARLLDGFGVG-LAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSWRLMLGVLSIPALLY 175 (706)
Q Consensus 97 Lli~R~L~GIg~G-~~~~~~~a~IsE~fP~k~Rg~a~Gi~~ag~~LG~alg~ll~~~l~l~~~~GWR~~FlI~ail~LV~ 175 (706)
.+++-.+..++.+ +..+....+..|.+|.+.|+++.++......++.++++..... .....+-...|.+.++++++.
T Consensus 351 ~i~~~~l~~~~~~~g~~~~~~~~~~ElfPt~~R~~~~~~~~~~~~i~~~i~~~~~~~--~~~~~~~~~~~~i~~~~~~i~ 428 (451)
T PF00083_consen 351 SIVFLALFFAFFSLGWGPLPWIYTAELFPTKVRSTGIGLSYAVGRIGGFIIPFLFPY--LFNNLGGWGVFLIFAGVCLIA 428 (451)
T ss_pred cceeeeecccccccccccccccccccccccccccccccccccccccccccccccccc--ccccccccccchhhHHHHHHH
Confidence 1222222222222 2335566888999999999999999999888888887443322 222323234566777777777
Q ss_pred HHHHHhhccCCchhhhcccchHHH
Q 005249 176 FAFAVFFLPESPRWLVSKGKMLEA 199 (706)
Q Consensus 176 ~ll~~lflpEsp~~l~~k~~~~~~ 199 (706)
.++.++++||+ +++..+.
T Consensus 429 ~i~~~~~lpET------~g~~l~e 446 (451)
T PF00083_consen 429 IIFVYFFLPET------KGKTLEE 446 (451)
T ss_pred HhheeEEEeeC------CCCCHHH
Confidence 77888999999 6655543
No 246
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=97.88 E-value=1e-05 Score=90.69 Aligned_cols=178 Identities=12% Similarity=0.032 Sum_probs=124.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChhHHHH--------HHHH-HHHHHHHHHHHHHHHhhhhCChHHHHH
Q 005249 6 LVAIAATIGNFLQGWDNATIAGAIVYIKKDLNLGTTVEGL--------VVAM-SLIGATAITTCSGPISDWLGRRPMLIL 76 (706)
Q Consensus 6 liliil~L~~fl~gl~~~iis~~lp~I~q~fGLS~s~igL--------l~S~-~~Ig~~Igsl~~G~LaDR~GRRrvLli 76 (706)
..++..+..+|+.-...+..+.....+.+.+|+.+..... ...+ ...++..+..+...+.|++|||++.+.
T Consensus 304 ~~Llgt~~~WFllDiafy~~nL~~s~I~~~ig~~~~~~~~~~~~~vA~~~~iia~~~~vPGyw~tv~~id~iGRk~iq~~ 383 (538)
T KOG0252|consen 304 KHLLGTAGTWFLLDIAFYGQNLFQSVIFSAIGVIPSANTYHELFKVAEGNLIIAVCSTVPGYWFTVYFIDIIGRKYIQLM 383 (538)
T ss_pred HHHHHHHHHHHhhhhhhhccccHHHHHHHhhccCCCcchHHHHHHHHHHHHHHHHHccCCceeEEEEEeehhhhHHHHHh
Confidence 4566778888887777777777777888888876543332 1111 122333355666778999999999999
Q ss_pred HHHHHHHHHHHHHhhhh-H---HHHHHHHHHHHHHHH-hHHHHHHHHHHhcCCcchhhHHhHHHHHHHHHHHHHHHHHHH
Q 005249 77 SSVLYFVSGLVMLWSPN-V---YVLCIARLLDGFGVG-LAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVF 151 (706)
Q Consensus 77 g~iL~aIgsll~a~a~s-~---~lLli~R~L~GIg~G-~~~~~~~a~IsE~fP~k~Rg~a~Gi~~ag~~LG~alg~ll~~ 151 (706)
+.+++.+..+..+...+ . ..++++..+..+... +.......+.+|.||.+.|+..-|+..+..-+|++++...
T Consensus 384 GF~~~~i~~~~~~~~y~~~~~~~Gf~v~y~l~~ff~NFGPn~ttfivpaE~FParvR~t~hGIsAA~GK~GAivg~~~-- 461 (538)
T KOG0252|consen 384 GFFIMTIFFFVIAGPYNQLENTIGFVVLYSLTFFFGNFGPNATTFIVPAEIFPARVRSTCHGISAASGKAGAIVGAFG-- 461 (538)
T ss_pred hHHHHHHHHHHHcCCcccccccCceeehHHHHHHHHhcCCCceeEEeehhhchHHHhhhhhhHHHHhccchHHHHHHH--
Confidence 99999999998888765 1 222233333333222 2223344677999999999999999999999999998443
Q ss_pred HHHHhc-----cchhhHHHHHHHHHHHHHHHHHHhhccCC
Q 005249 152 GMSLLA-----SPSWRLMLGVLSIPALLYFAFAVFFLPES 186 (706)
Q Consensus 152 ~l~l~~-----~~GWR~~FlI~ail~LV~~ll~~lflpEs 186 (706)
+..... ..+.|.+|++.+.++++.. +..+++||+
T Consensus 462 F~~~t~~~yp~~~g~~~v~~i~~~~~~~gi-~~T~l~pEt 500 (538)
T KOG0252|consen 462 FLYLTDHNYPPNIGVRNVFIILAGCMLLGI-LFTLLIPET 500 (538)
T ss_pred hhHhhhccCCccccchHHHHHHHHHHHHhH-heeEEeecc
Confidence 333344 5688999999999888855 445778898
No 247
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=97.84 E-value=0.0071 Score=70.79 Aligned_cols=160 Identities=17% Similarity=0.200 Sum_probs=118.1
Q ss_pred HHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhh-CChHHHHHHHHHHHHHHHHHHhhhh----------
Q 005249 25 IAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWL-GRRPMLILSSVLYFVSGLVMLWSPN---------- 93 (706)
Q Consensus 25 is~~lp~I~q~fGLS~s~igLl~S~~~Ig~~Igsl~~G~LaDR~-GRRrvLlig~iL~aIgsll~a~a~s---------- 93 (706)
..+.+.++..+++.+...+.-..+.+.-...+..+++++++|-| ||-+++.++.++..++.++..++..
T Consensus 57 ~~nlv~ylt~~~~~~~~~aa~~v~~f~G~~~~~~l~g~~laD~f~gry~tI~~~s~i~~~G~~~lt~~a~~~~l~p~~~~ 136 (571)
T KOG1237|consen 57 VSNLVTYLTLELHASGGGAANNVNAFGGTQFLLPLLGAFLADSFLGRYFTINIGSLISLLGLFGLTLSAMIPALLPFMCK 136 (571)
T ss_pred hhHHHHHHHHHhccchHHHHHHHHHHhhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCcccc
Confidence 45677889999999988888888888888888889999999976 7888999999888888655544211
Q ss_pred ---------------HHHHHHHHHHHHHHHHhHHHHHHHHHHhcCC---cch-h--hHHhHHHHHHHHHHHHHHHHHHHH
Q 005249 94 ---------------VYVLCIARLLDGFGVGLAVTLVPLYISETAP---SEI-R--GRLNTLPQFTGSGGMFLAYCMVFG 152 (706)
Q Consensus 94 ---------------~~lLli~R~L~GIg~G~~~~~~~a~IsE~fP---~k~-R--g~a~Gi~~ag~~LG~alg~ll~~~ 152 (706)
...++....+..+|.|+.-+...++-+|.++ +++ + ...+..+....++|..++ ....
T Consensus 137 ~~~~~~~c~~~s~~q~~~~~~~l~lia~G~gg~r~~~~~fGadQfd~~~~~~~~~~~~fFnW~yf~~~~g~l~a--~t~~ 214 (571)
T KOG1237|consen 137 FKPGGNVCESPSKLQLAVLYGALYLIALGAGGIRPCLLAFGADQFDELDPVEVKGIPSFFNWFYFSQNGGALLA--QTVL 214 (571)
T ss_pred CCCCCCcccCcchHHHHHHHHHHHHheeccCCCCCcchhhcccccCccCcchhhCcccchhHHHHHHHHHHHHH--HHHH
Confidence 1355566778888999999999999999998 322 2 356677788888888887 4444
Q ss_pred HHHhccchhhHHHHHHHHHHHHHHHHHHhhccCCchh
Q 005249 153 MSLLASPSWRLMLGVLSIPALLYFAFAVFFLPESPRW 189 (706)
Q Consensus 153 l~l~~~~GWR~~FlI~ail~LV~~ll~~lflpEsp~~ 189 (706)
.+.-++.+|.+.|.+..+..++.. +.|++-.|.|
T Consensus 215 vyiq~~~~w~lgf~i~~~~~~lai---~iF~~g~~~y 248 (571)
T KOG1237|consen 215 VYIQDNVGWKLGFGIPTVLNALAI---LIFLPGFPFY 248 (571)
T ss_pred HhhhhcccceeeccHHHHHHHHHH---HHHHcCceeE
Confidence 444467799999887777666644 3444444433
No 248
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=97.84 E-value=0.0017 Score=72.37 Aligned_cols=150 Identities=11% Similarity=0.057 Sum_probs=121.4
Q ss_pred HHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhh-hhCChHHHHHHHHHHHHHHHHHHh---hhhHHHHHHHHHHHH
Q 005249 30 VYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISD-WLGRRPMLILSSVLYFVSGLVMLW---SPNVYVLCIARLLDG 105 (706)
Q Consensus 30 p~I~q~fGLS~s~igLl~S~~~Ig~~Igsl~~G~LaD-R~GRRrvLlig~iL~aIgsll~a~---a~s~~lLli~R~L~G 105 (706)
|+=.+-||++..+...++.....|..++-...|++.. |.+++++-.+++.+.+++..+..+ ..+.+.+...-++.|
T Consensus 233 Pygg~Vfgmsv~eTT~Lta~~~~G~L~G~~~~g~~l~~~~~~~~~a~~G~~~~~~~f~lii~a~~~~~~~~~~~~~~l~G 312 (403)
T PF03209_consen 233 PYGGEVFGMSVGETTRLTAFWGGGTLLGMLLAGFLLSRRLGKKRTAALGCLLGALAFALIILAGPLGSPWLFRPGVFLLG 312 (403)
T ss_pred CchhHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHH
Confidence 5566779999999999999999999999999998877 778888888888888877766554 457889999999999
Q ss_pred HHHHhHHHHHHHHHHhcCCcchhhHHhHHHHHHHHHHHHHHHHHHHHHH-----Hh---ccchhhHHHHHHHHHHHHHHH
Q 005249 106 FGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMS-----LL---ASPSWRLMLGVLSIPALLYFA 177 (706)
Q Consensus 106 Ig~G~~~~~~~a~IsE~fP~k~Rg~a~Gi~~ag~~LG~alg~ll~~~l~-----l~---~~~GWR~~FlI~ail~LV~~l 177 (706)
++.|.......+.+.+...+++-|.++|.+.....++..++........ .. ...+|-.+|.+.++..++.++
T Consensus 313 ~g~G~f~vgals~mM~lt~~~~aG~~mG~WGaaQA~A~Glg~~~GG~~~D~~~~~~~~~~~~aY~~VF~lEa~ll~~a~~ 392 (403)
T PF03209_consen 313 LGNGLFTVGALSLMMDLTSAGRAGLFMGAWGAAQAIARGLGTFLGGALRDLVRALFGNSPALAYGVVFALEAVLLLAALV 392 (403)
T ss_pred HhhhHHHHHHHHHHHhCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcchHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999888887777755554432 11 224677888887777666554
Q ss_pred HH
Q 005249 178 FA 179 (706)
Q Consensus 178 l~ 179 (706)
+.
T Consensus 393 ll 394 (403)
T PF03209_consen 393 LL 394 (403)
T ss_pred HH
Confidence 43
No 249
>PF12832 MFS_1_like: MFS_1 like family
Probab=97.74 E-value=0.00026 Score=61.27 Aligned_cols=71 Identities=17% Similarity=0.162 Sum_probs=61.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhCChHHHHHHHHHH
Q 005249 11 ATIGNFLQGWDNATIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLY 81 (706)
Q Consensus 11 l~L~~fl~gl~~~iis~~lp~I~q~fGLS~s~igLl~S~~~Ig~~Igsl~~G~LaDR~GRRrvLlig~iL~ 81 (706)
+...+++.....+.+.|+++.+.++.|++..++|++.++..+...++.+++|.++||+++++.+.....++
T Consensus 5 lk~~yf~~f~~~g~~~Pfl~~~~~~~Gl~~~~iGil~~i~~~~~~~~~pl~g~laDk~~~~~~~l~~~~~~ 75 (77)
T PF12832_consen 5 LKAFYFFYFAALGCLYPFLPLYLKQLGLSPSQIGILSAIRPLIRFLAPPLWGFLADKFGKRKVILLGSLFM 75 (77)
T ss_pred HHHHHHHHHHHHHHHHhhhhHhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCccHHHHHHHHHH
Confidence 44556666777777888888899999999999999999999999999999999999999998887665543
No 250
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=97.66 E-value=0.0002 Score=81.23 Aligned_cols=123 Identities=19% Similarity=0.201 Sum_probs=92.8
Q ss_pred HHHHHhh-hcchHHHHhHHHHHHHHHHHHHHHhhhhhhhhhHHHHHHHHHHHHHHHHhhcccccchhhhhcccCCcc--h
Q 005249 550 AMKLMDV-AGRRKLLLTTIPVLIVSLIILVISETLQLISPVLKAGISTACVIIYFCCFVAAYGPIPNILCAEIFPTK--V 626 (706)
Q Consensus 550 ~~~l~d~-~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~--~ 626 (706)
+|+++|| +|+|+.++++.++++++.++++...... ...+...+.+..+-....=+-...++.|+.|++ .
T Consensus 81 GG~laDr~LG~~~tI~lGail~~iGh~~L~~~~~~~--------~~gl~i~L~~I~iG~Gl~K~NiS~llg~ly~~~Dpr 152 (498)
T COG3104 81 GGWLADRVLGTRRTIVLGAILMAIGHLVLAISSVSG--------PGGLYIGLALIIVGTGLFKPNISSLLGELYPKDDPR 152 (498)
T ss_pred HHHHHHHhcchhHHHHHHHHHHHHHHHHHhcccccc--------ccHHHHHHHHHHhccccccccHHHHHHHhcCCCCcc
Confidence 8999999 5999999999999999999998864111 011111111222211222355667888988653 2
Q ss_pred hhhHHHHHHHHHHHHHHHHHhHHHHHHHhhchhhHHHHHHHHHHHHHHHHHhcc
Q 005249 627 RGICIAICAMAYWICDIIVTYTLPVMLSSIGLAGAFGVYAVVCFISWVFVFLRV 680 (706)
Q Consensus 627 r~~~~~~~~~~~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 680 (706)
|-.+.++..+..++|+++.|.+.+.+.+..||...|.+.++-++++.+..++..
T Consensus 153 rD~gFt~fY~~iNiGsl~~p~i~~~~~~~~g~~~gF~~aavGm~~gl~~f~~~~ 206 (498)
T COG3104 153 RDGGFTLFYMGINIGSLIAPIITGLLAINYGWHVGFGLAAVGMIIGLVIFLLGR 206 (498)
T ss_pred cCCCccEEEEEeehHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHcc
Confidence 667899999999999999999999999999999999999999999888877643
No 251
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=97.62 E-value=0.0034 Score=69.93 Aligned_cols=162 Identities=12% Similarity=0.046 Sum_probs=119.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH-cCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhCChHHHHHHHHHHHHHHHHH
Q 005249 10 AATIGNFLQGWDNATIAGAIVYIKKD-LNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVM 88 (706)
Q Consensus 10 il~L~~fl~gl~~~iis~~lp~I~q~-fGLS~s~igLl~S~~~Ig~~Igsl~~G~LaDR~GRRrvLlig~iL~aIgsll~ 88 (706)
.-.++.|++--........++.+..+ .|++..+.....+.+..+.++|.+++.++..|+...|.+.+..++..+.++..
T Consensus 240 ~gvl~~FlYVG~Eva~gsfl~~y~~~~~g~~~~~aa~~~s~~~~~~~vGRFig~~lm~~~~~~k~Laf~a~~~ill~~~~ 319 (422)
T COG0738 240 LGVLAIFLYVGAEVAIGSFLVSYLEELLGLNEQQAAYYLSFFWVGFMVGRFIGSALMSRIKPEKYLAFYALIAILLLLAV 319 (422)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHH
Confidence 33455566655566666677766666 89999999999999999999999999999999999999999998888888888
Q ss_pred HhhhhHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCcchhhHHhHHHHHHHHHHHHHHHHHHHHHHHhccchhhHHHHHH
Q 005249 89 LWSPNVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSWRLMLGVL 168 (706)
Q Consensus 89 a~a~s~~lLli~R~L~GIg~G~~~~~~~a~IsE~fP~k~Rg~a~Gi~~ag~~LG~alg~ll~~~l~l~~~~GWR~~FlI~ 168 (706)
+++++...+ .+-++.|+..+..+|...+...+..| ++-... |..-....+|.++. |.......+..+-...+.+.
T Consensus 320 ~l~~g~v~~-~~l~~ig~F~simfPTIfslal~~l~-~~ts~~-s~~l~maivGGAii--P~l~G~i~d~~g~~~~~~~~ 394 (422)
T COG0738 320 ALIGGVVAL-YALFLIGLFNSIMFPTIFSLALKNLG-EHTSVG-SGLLVMAIVGGAII--PPLQGVIADMFGIQLTFLIV 394 (422)
T ss_pred HHhcChHHH-HHHHHHHHHhHHHHHHHHHHHHhccC-cccccc-ceeeeeheecchHH--HHHHHHHHHhhhhHHHHHHH
Confidence 888884443 45678899999999999999999998 444444 44444555666665 33344445556666666544
Q ss_pred HHHHHHHH
Q 005249 169 SIPALLYF 176 (706)
Q Consensus 169 ail~LV~~ 176 (706)
..+|.+..
T Consensus 395 pllc~lyV 402 (422)
T COG0738 395 PLLCYLYV 402 (422)
T ss_pred HHHHHHHH
Confidence 45554433
No 252
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=97.61 E-value=0.00031 Score=79.99 Aligned_cols=127 Identities=17% Similarity=0.123 Sum_probs=103.2
Q ss_pred HHHHHhhhcchHHHHhHHHHHHHHHHHHHHHhhhhhhhhhHHHHHHHHHHHHHHHHhhcccccchhhhhcccCCcchhhh
Q 005249 550 AMKLMDVAGRRKLLLTTIPVLIVSLIILVISETLQLISPVLKAGISTACVIIYFCCFVAAYGPIPNILCAEIFPTKVRGI 629 (706)
Q Consensus 550 ~~~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~ 629 (706)
-|-++|++|||..++.....+.+..+.+.+.. +..++ +....+...+.....+++++++...+.|..
T Consensus 82 iG~lSD~~grk~~L~~~~~~~~l~~~~~~~~~-----------~~~~~--~~~l~g~~~~~~s~~~a~vadis~~~~R~~ 148 (463)
T KOG2816|consen 82 IGALSDRYGRKVVLLLPLFGTILPALCLLFQG-----------YWFFL--LLGLSGGFSAIFSVGFAYVADISSEEERSS 148 (463)
T ss_pred hHHhhhhhhhhhhHHHHHHHHHHhHHHHHHHH-----------HHHhh--hcccccchhhhhhhhhhheeeccchhHHHH
Confidence 58999999999999988877777777666532 11111 333333333445666789999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHhhchhhHHHHHHHHHHHHHHHHHhcccCCCCCChH
Q 005249 630 CIAICAMAYWICDIIVTYTLPVMLSSIGLAGAFGVYAVVCFISWVFVFLRVPETKGMPLE 689 (706)
Q Consensus 630 ~~~~~~~~~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~et~~~~~~ 689 (706)
..|+.+...+.+..++|.+.+......|.+.+|.+-++..++..++.++++||+...+.+
T Consensus 149 ~~gll~~~~~~~~~~~p~~~~~~~~~~~~a~~f~ia~~~~~~~~~y~~~~l~Esl~~~~~ 208 (463)
T KOG2816|consen 149 SIGLLSGTFGAGLVIGPALGGYLVKFLGIALVFLIAAASGILSLLYMLLFLPESLQEKER 208 (463)
T ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHhhccccccCcccc
Confidence 999999999999999999999999999999999999999999999999999998765544
No 253
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=97.58 E-value=0.26 Score=56.71 Aligned_cols=143 Identities=8% Similarity=0.079 Sum_probs=101.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC-----ChhHHHHHHHHHHHHHHHH-HHHHHHHhhhhCChHHHHHHHHHH
Q 005249 8 AIAATIGNFLQGWDNATIAGAIVYIKKDLNL-----GTTVEGLVVAMSLIGATAI-TTCSGPISDWLGRRPMLILSSVLY 81 (706)
Q Consensus 8 liil~L~~fl~gl~~~iis~~lp~I~q~fGL-----S~s~igLl~S~~~Ig~~Ig-sl~~G~LaDR~GRRrvLlig~iL~ 81 (706)
++.+.+.+|+..++.+.. -.+++.+.+ +.....++.+...+...+. .++.+++++|++|++++.+....+
T Consensus 9 ~~~~~l~fF~il~~Y~iL----R~lKD~lvv~~~~~gae~i~fLk~~~~lp~~~~~~~ly~~l~~~~~~~~lf~~~~~~F 84 (472)
T TIGR00769 9 FLPLFLMFFCILFNYTIL----RDTKDTLVVTAKGSGAEIIPFLKTWVVVPMAVIFMLIYTKLSNILSKEALFYTVISPF 84 (472)
T ss_pred HHHHHHHHHHHHHHHHHH----HhhhhheeecccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHhHHHHHHHH
Confidence 334444445555544443 446666655 3467888888887777766 889999999999999999888777
Q ss_pred HHHHHHHHhh----h---------------------------hHHHHHHHHHHHHHHHHhHHH-HHHHHHHhcCCcchhh
Q 005249 82 FVSGLVMLWS----P---------------------------NVYVLCIARLLDGFGVGLAVT-LVPLYISETAPSEIRG 129 (706)
Q Consensus 82 aIgsll~a~a----~---------------------------s~~lLli~R~L~GIg~G~~~~-~~~a~IsE~fP~k~Rg 129 (706)
.+..+++++. + +.|...+......+......+ ..+.++.|.++.++-.
T Consensus 85 ~~~f~lF~~vl~p~~~~~~p~~~~~~~~~~~~~~~~~~i~~~~~W~~~~FYv~~elw~~~vvS~lFW~fandi~t~~qak 164 (472)
T TIGR00769 85 LGFFALFAFVIYPLSDLLHPTALADKLLSLLPPGFMGFIAILRIWSFALFYVMAELWGSVVLSLLFWGFANQITTIDEAK 164 (472)
T ss_pred HHHHHHHHHHHhcchhhcCCcHHHHHHHhhcchhhHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHH
Confidence 7777776654 1 123333334445555555555 6788999999999999
Q ss_pred HHhHHHHHHHHHHHHHHHHHHHHHH
Q 005249 130 RLNTLPQFTGSGGMFLAYCMVFGMS 154 (706)
Q Consensus 130 ~a~Gi~~ag~~LG~alg~ll~~~l~ 154 (706)
|..++...+.++|..+++.......
T Consensus 165 Rfy~l~~~ganlg~i~sg~~~~~~~ 189 (472)
T TIGR00769 165 RFYALFGLGANVALIFSGRTIKYFS 189 (472)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999976655543
No 254
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=97.56 E-value=0.16 Score=57.72 Aligned_cols=174 Identities=16% Similarity=0.030 Sum_probs=97.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC-ChhHHHHHHHHHHHHHHHHHHHHHHHhhhhCChHHHHHHHHHHHH---
Q 005249 8 AIAATIGNFLQGWDNATIAGAIVYIKKDLNL-GTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFV--- 83 (706)
Q Consensus 8 liil~L~~fl~gl~~~iis~~lp~I~q~fGL-S~s~igLl~S~~~Ig~~Igsl~~G~LaDR~GRRrvLlig~iL~aI--- 83 (706)
...+++++++..++.-++....+.+..+..- +---.+...-.-.+..++.++..|...||..|.+++..+.++--+
T Consensus 4 ~~~Ly~sh~ls~w~dR~w~Fa~~L~L~~i~p~sLl~~siygl~~~~~~~~f~~~vG~~iD~~~Rl~~~~~~l~~Qn~sv~ 83 (432)
T PF06963_consen 4 LWRLYLSHFLSTWGDRMWEFAVPLFLISIFPGSLLPVSIYGLVRSLSAILFGPWVGRWIDRSPRLKVIRTSLVVQNLSVA 83 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHhhHHHHHHHhCCcchhhHHHHHHHHHHHHH
Confidence 3457888888888888888888887777633 333344444444566777888899999999999987766544222
Q ss_pred -HHHHHH--hh--h----hHHHH---HHHHHHHHHHHHhHHHH-HHHHHHhc----C--CcchhhHHhHHHHHHHHHHHH
Q 005249 84 -SGLVML--WS--P----NVYVL---CIARLLDGFGVGLAVTL-VPLYISET----A--PSEIRGRLNTLPQFTGSGGMF 144 (706)
Q Consensus 84 -gsll~a--~a--~----s~~lL---li~R~L~GIg~G~~~~~-~~a~IsE~----f--P~k~Rg~a~Gi~~ag~~LG~a 144 (706)
++.+.. +. . +.+.. ++.-.+.|...-....+ ..+.=-|| . ++..+.+.++...-.--+.-+
T Consensus 84 ~s~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~i~~Las~~~~iavERDWVvvi~~~~~~~La~~NA~mRRIDL~ckl 163 (432)
T PF06963_consen 84 ASCALFLLLLSYPSSSSQSSWLFIALFALLILLGAIERLASIANTIAVERDWVVVIAGGDPGALARMNATMRRIDLFCKL 163 (432)
T ss_pred HHHHHHHHHHhCCccccccchHHHHHHHHHHHHHHHHHHHHhhhhheeccchhhhhcCCChhhHHHHHHHHHHHHHHHHH
Confidence 222221 11 1 11222 22222222211111111 11111233 2 334455555555555566777
Q ss_pred HHHHHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHhhc
Q 005249 145 LAYCMVFGMSLLASPSWRLMLGVLSIPALLYFAFAVFFL 183 (706)
Q Consensus 145 lg~ll~~~l~l~~~~GWR~~FlI~ail~LV~~ll~~lfl 183 (706)
++|+.... .....+.+....+.++..++..++=++++
T Consensus 164 laPl~vG~--l~t~~s~~~~~~~i~~~N~~S~~vEy~~l 200 (432)
T PF06963_consen 164 LAPLFVGL--LMTFASPVIAAIFIAGWNLASVFVEYFLL 200 (432)
T ss_pred HHHHHHHH--HhhccCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77544433 33445777777777777777776655544
No 255
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=97.53 E-value=0.0012 Score=69.54 Aligned_cols=138 Identities=17% Similarity=0.217 Sum_probs=93.9
Q ss_pred hhhhhHhcHHHHHHhhhh---------------------HHHHHhhhcchHHHHhHHHHHHHHHHHHHHHhhhhhhhhhH
Q 005249 532 GINGVLYYTPQILEQAGV---------------------AMKLMDVAGRRKLLLTTIPVLIVSLIILVISETLQLISPVL 590 (706)
Q Consensus 532 g~~~~~~~~~~~~~~~g~---------------------~~~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 590 (706)
..+.+..|.|++-++.|+ +|.+.|++|.+.+++++.....++...+....... +.
T Consensus 17 t~Y~Fs~yS~~Lk~~l~~sq~~l~~l~~~~~~G~~~G~~~G~l~d~~gp~~~l~iG~~~~~~GY~~~~l~~~~~-i~--- 92 (250)
T PF06813_consen 17 TTYTFSAYSPQLKSRLGYSQSQLNTLSTAGDIGSYFGILAGLLYDRFGPWVVLLIGAVLGFVGYGLLWLAVSGR-IP--- 92 (250)
T ss_pred cccchhhhhHHHHHHhCCCHHHHHHHHHHHHHHhhccHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCc-cC---
Confidence 456778999999887665 99999999999999999999988888776654433 11
Q ss_pred HHHHHHHHHHHHHHHhhcccc-cchhhhhcccCCcchhhhHHHHHHHHHHHHHHHHHhHHHHHHHhhchhhHHHHHHHHH
Q 005249 591 KAGISTACVIIYFCCFVAAYG-PIPNILCAEIFPTKVRGICIAICAMAYWICDIIVTYTLPVMLSSIGLAGAFGVYAVVC 669 (706)
Q Consensus 591 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~e~~p~~~r~~~~~~~~~~~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~~~ 669 (706)
.......+++.+..+.+..+. ......+...||. .||++.|+.-....+++.+-+.+.-.+... .....+.+.+...
T Consensus 93 ~~~~~~~~~~~~l~~~s~~~~~ta~lvt~~~NFP~-~RG~vvgilk~~~GLSaai~t~i~~~~f~~-~~~~fll~la~~~ 170 (250)
T PF06813_consen 93 SLPVWLMCLFLFLGGNSSCWFNTASLVTCVRNFPR-SRGTVVGILKGFFGLSAAIFTQIYSAFFGD-DPSSFLLFLAVLP 170 (250)
T ss_pred ccchHHHHHHHHHHcccHHHhhhHHHHHHHHhCcc-ccCceehhhhHHHHhHHHHHHHHHHHHcCC-ChHHHHHHHHHHH
Confidence 112223344444444444433 2233456688986 599999999999999999999887776655 3333444555554
Q ss_pred HHHHHH
Q 005249 670 FISWVF 675 (706)
Q Consensus 670 ~~~~~~ 675 (706)
.+..++
T Consensus 171 ~~v~l~ 176 (250)
T PF06813_consen 171 AVVCLV 176 (250)
T ss_pred HHHHHH
Confidence 444333
No 256
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=97.52 E-value=0.00089 Score=76.91 Aligned_cols=159 Identities=14% Similarity=0.075 Sum_probs=104.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCChhHHHHHHHHHHHHHHHHHHHHHHHhhh----hCChHHHHHHHHHHH
Q 005249 8 AIAATIGNFLQGWDNATIAGAIVYIKKD-LNLGTTVEGLVVAMSLIGATAITTCSGPISDW----LGRRPMLILSSVLYF 82 (706)
Q Consensus 8 liil~L~~fl~gl~~~iis~~lp~I~q~-fGLS~s~igLl~S~~~Ig~~Igsl~~G~LaDR----~GRRrvLlig~iL~a 82 (706)
++..++..++.....+.+...+|.+.++ .|.+..+.+.+.+.+.++.+++.+++|+++|| ..+|..+...+.++.
T Consensus 275 vw~~~l~~~~~~lv~~~~~~~lpl~l~~~~~~s~~~a~~ls~~~~~~g~v~~i~ag~lsdr~~~~~~~~~~~~~~~~~~~ 354 (495)
T KOG2533|consen 275 VWPFSLCYFFLKLVNYGFSYWLPLYLKSNGGYSELQANLLSTPYDVGGIVGLILAGYLSDRLKTIFARRLLFIVFLCLYA 354 (495)
T ss_pred HHHHHHHHHHHhhccccHHHHHHHHHHcCCCcChHHhccccchHHhhhHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHH
Confidence 4556677777777778788888988887 66999999999999999999999999999999 667777666666655
Q ss_pred HHH-HHHHhhhhHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCcchhh-HHhHHHHHHHHHHHHHHHHHHHHHH-Hhccc
Q 005249 83 VSG-LVMLWSPNVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRG-RLNTLPQFTGSGGMFLAYCMVFGMS-LLASP 159 (706)
Q Consensus 83 Igs-ll~a~a~s~~lLli~R~L~GIg~G~~~~~~~a~IsE~fP~k~Rg-~a~Gi~~ag~~LG~alg~ll~~~l~-l~~~~ 159 (706)
+.. +..............-+....+.+...+.....+++...+..|. ...+....+.+.+.++++ ..... ....+
T Consensus 355 ~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~s~~~~g~~k~~~~~~~~i~~~~s~~~~~~--~~~~~~~ap~y 432 (495)
T KOG2533|consen 355 IIGAISLLAAAVLPGAYGAFLIGPYGLIATAIIALSWTSANLAGNTKALTTVSAIIDGTGSAGAISG--QLFRSLDAPRY 432 (495)
T ss_pred HHHHHHHHhhccchHHhHHHHhcchhhHHHHHHHHhhccccccchHHhHHHHhhhhcchhHHHHhhh--hhcccccCcch
Confidence 554 44444433444444444445556666677778888777665443 344444445555554442 22221 12234
Q ss_pred hhhHHHHHH
Q 005249 160 SWRLMLGVL 168 (706)
Q Consensus 160 GWR~~FlI~ 168 (706)
.|-..|...
T Consensus 433 ~~~~~f~~~ 441 (495)
T KOG2533|consen 433 GWGAVFYML 441 (495)
T ss_pred hhhhHHHHH
Confidence 777777433
No 257
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=97.43 E-value=0.0025 Score=67.61 Aligned_cols=92 Identities=22% Similarity=0.353 Sum_probs=72.0
Q ss_pred HHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhCChHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHh
Q 005249 31 YIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVMLWSPNVYVLCIARLLDGFGVGL 110 (706)
Q Consensus 31 ~I~q~fGLS~s~igLl~S~~~Ig~~Igsl~~G~LaDR~GRRrvLlig~iL~aIgsll~a~a~s~~lLli~R~L~GIg~G~ 110 (706)
++-+.||....+++.+..+.+-..++...+.|-++|+-|||+.-+.-.+.++++++ .-.++.|-.++++|.+-|++.+.
T Consensus 62 yLYstYgFgkG~IgqLfiaGfgSsmLFGtivgSLaDkqGRKracvtycitYiLsCi-TKhSpqYkVLmVGR~LGGiaTsL 140 (454)
T KOG4332|consen 62 YLYSTYGFGKGDIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCITYILSCI-TKHSPQYKVLMVGRVLGGIATSL 140 (454)
T ss_pred eeehhcCccCCccceeeecccchHHHHHHHHHHHHhhhccccceeeehHHHHHHHH-hhcCCceEEEeehhhhhhHHHHH
Confidence 35567788888999888777777788888899999999999987766665555543 33478899999999999999999
Q ss_pred HHHHHHHH-HHhcC
Q 005249 111 AVTLVPLY-ISETA 123 (706)
Q Consensus 111 ~~~~~~a~-IsE~f 123 (706)
.+...-++ +.|.-
T Consensus 141 LFSaFEsWliaEHn 154 (454)
T KOG4332|consen 141 LFSAFESWLIAEHN 154 (454)
T ss_pred HHHHHHHHHHHHhh
Confidence 88877654 45544
No 258
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=96.94 E-value=0.048 Score=60.70 Aligned_cols=141 Identities=21% Similarity=0.183 Sum_probs=98.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhh-----hhCChHHHH-HHHHHH
Q 005249 8 AIAATIGNFLQGWDNATIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISD-----WLGRRPMLI-LSSVLY 81 (706)
Q Consensus 8 liil~L~~fl~gl~~~iis~~lp~I~q~fGLS~s~igLl~S~~~Ig~~Igsl~~G~LaD-----R~GRRrvLl-ig~iL~ 81 (706)
+..+.+.+.+.+...+... .+|.+.+.-|+|.++.+...-++ ..+ -.-+++..+.| |+||||..+ -+..+.
T Consensus 33 illLl~LYllQGiP~GL~~-~iP~lL~ak~vSyt~~a~fS~ay-~P~-sLKllWaPiVDs~y~k~~GrrksWvvp~q~ll 109 (510)
T KOG3574|consen 33 ILLLLFLYLLQGIPLGLIG-AIPLLLQAKGVSYTSQAIFSFAY-WPF-SLKLLWAPIVDSVYSKRFGRRKSWVVPCQYLL 109 (510)
T ss_pred HHHHHHHHHHcCCchhHhh-hhHHHhcCCCcchhhhhhhhhhh-hHH-HHHHHHHhhhHHHHHHhhccccceeeehHHHH
Confidence 3455566778888888877 88999999999988877544332 121 22356778888 999998644 344444
Q ss_pred HHHHHHHHh-----------hhhHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCcchhhHHhHHHHHHHHHHHHHHHHHH
Q 005249 82 FVSGLVMLW-----------SPNVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMV 150 (706)
Q Consensus 82 aIgsll~a~-----------a~s~~lLli~R~L~GIg~G~~~~~~~a~IsE~fP~k~Rg~a~Gi~~ag~~LG~alg~ll~ 150 (706)
+...++.+. .++...+....++.-+..+....++..+...+..+++-|.+......+...|.+++..+.
T Consensus 110 G~~mllLs~~v~~~~g~ng~~p~v~~lt~~f~LLnflaAtQDIAVDgwALtmLs~e~lgyaST~q~Vg~~~GyfL~~~if 189 (510)
T KOG3574|consen 110 GLFMLLLSYLVDRGLGGNGGLPNVVALTLLFLLLNFLAATQDIAVDGWALTMLSRENLGYASTCQSVGQTAGYFLGNVVF 189 (510)
T ss_pred HHHHHHHhhCCCcccccCCCCcchHHHHHHHHHHHHHHhhhhhhhhHHHHHhcCHhhcCchhHHHHHHHhhhHHhhccee
Confidence 444444443 133344444556667777777788888999999999999999999999999999886554
Q ss_pred H
Q 005249 151 F 151 (706)
Q Consensus 151 ~ 151 (706)
.
T Consensus 190 L 190 (510)
T KOG3574|consen 190 L 190 (510)
T ss_pred e
Confidence 3
No 259
>PRK03612 spermidine synthase; Provisional
Probab=96.81 E-value=0.14 Score=59.37 Aligned_cols=152 Identities=13% Similarity=0.012 Sum_probs=86.5
Q ss_pred HHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhCChHHHH-HHHHHHH-HHHHHHHhhh----hH-HHHHHHHHH
Q 005249 31 YIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLI-LSSVLYF-VSGLVMLWSP----NV-YVLCIARLL 103 (706)
Q Consensus 31 ~I~q~fGLS~s~igLl~S~~~Ig~~Igsl~~G~LaDR~GRRrvLl-ig~iL~a-Igsll~a~a~----s~-~lLli~R~L 103 (706)
.+...+|-+...++++.+++.+|.++|+.+++++.++.-++...+ ++..+.+ ++..+..... .+ ..++...++
T Consensus 40 ~l~~~~G~s~~~~~~ii~~fl~glalGs~l~~~~~~~~~~~~~~~e~~i~l~~~~~~~ll~~~~~~~~~~~~~~~~~~~~ 119 (521)
T PRK03612 40 LASYLLGDSVTQFSTVIGLMLFAMGVGALLSKYLLRDAAAGFVAVELLLALLGGLSALILYAAFAFQGLSRLLLYVLVLL 119 (521)
T ss_pred HHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 355578999999999999999999999999998874433332211 1111111 1111111111 11 222334566
Q ss_pred HHHHHHhHHHHHHHHHHhcCCcchhhHHhHHHHHHHHHHHHHHHHHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHhhc
Q 005249 104 DGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSWRLMLGVLSIPALLYFAFAVFFL 183 (706)
Q Consensus 104 ~GIg~G~~~~~~~a~IsE~fP~k~Rg~a~Gi~~ag~~LG~alg~ll~~~l~l~~~~GWR~~FlI~ail~LV~~ll~~lfl 183 (706)
.++..|+..|....+..+... ++-+...|-......+|+++|.+......+ ...|-....++.+.+.++++++.++..
T Consensus 120 ~~~l~G~~~Pl~~~~~~~~~~-~~~g~~~g~ly~~ntlGa~~G~l~~~~vLl-p~lG~~~t~~~~a~l~~~~a~~~~~~~ 197 (521)
T PRK03612 120 IGLLIGMEIPLLMRILQRIRD-QHLGHNVATVLAADYLGALVGGLAFPFLLL-PRLGLIRTAALTGSLNLLAALVFLWLF 197 (521)
T ss_pred HHHHHHHHHHHHHHHHHhccc-cchhhhhhhhHhHHhHHHHHHHHHHHHHHH-HhcchHHHHHHHHHHHHHHHHHHHHHH
Confidence 778888887777766655432 223556677777777777777665544432 233544444455666655554444433
Q ss_pred c
Q 005249 184 P 184 (706)
Q Consensus 184 p 184 (706)
+
T Consensus 198 ~ 198 (521)
T PRK03612 198 R 198 (521)
T ss_pred H
Confidence 3
No 260
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=96.48 E-value=0.033 Score=63.06 Aligned_cols=136 Identities=18% Similarity=0.162 Sum_probs=82.8
Q ss_pred HHHHHhhhcchHHHHhHHHHHHHHHHHHHHHhhhhhhhhhHHHHHHHHHHHHHHHHhhcccccchhhhhcccCCcchhhh
Q 005249 550 AMKLMDVAGRRKLLLTTIPVLIVSLIILVISETLQLISPVLKAGISTACVIIYFCCFVAAYGPIPNILCAEIFPTKVRGI 629 (706)
Q Consensus 550 ~~~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~ 629 (706)
++|+.||+|-|..++++..+.+++..+=.+..... +.+.....+......+-....... -.++.=+.+-.||+++|++
T Consensus 99 ~mw~ldk~GLR~a~llgt~ln~iGa~Ir~iss~p~-v~~~f~~~l~~~Gq~iaa~Aq~Fi-m~lPskiA~~WF~~~qra~ 176 (480)
T KOG2563|consen 99 AMWILDKFGLRTALLLGTVLNGIGAWIRLISSLPF-VPPLFRRPLTHTGQSIAAAAQPFI-LGLPSKIAAVWFPPDQRAI 176 (480)
T ss_pred HHHhhcccchHHHHHHHHHHHHHHHHHhhhccCcc-ccccchhhhhHHhHHHHHHhhhHh-hccccHHHHhhCCcchhhh
Confidence 89999999999999999999988887766654432 223333222222222222111111 1122223344699999999
Q ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHhh----c--hhh--HHHHHHHHHHHHHHHHHhcccCCCCCC
Q 005249 630 CIAICAMAYWICDIIVTYTLPVMLSSI----G--LAG--AFGVYAVVCFISWVFVFLRVPETKGMP 687 (706)
Q Consensus 630 ~~~~~~~~~~~~~~i~~~~~~~~~~~~----g--~~~--~~~~~~~~~~~~~~~~~~~~~et~~~~ 687 (706)
+..+..+...+|..++..+-|.++.+. . |.. .|...++++.+.++.+.+..+++...|
T Consensus 177 A~~~~v~~n~LGvavg~llppilV~~~~~~~~~~~~~~~~f~~~~~l~~l~l~l~~~~~~~~P~tP 242 (480)
T KOG2563|consen 177 ATVLGVMGNPLGVAVGFLLPPILVPSSKDSEDNSWLFFTLFLGVECLAALLLALVLFVFTKKPPTP 242 (480)
T ss_pred hhhHHHhcchHHHHHHhhccceecCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCC
Confidence 999999999999999999888887654 2 221 233344444444444444444443333
No 261
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=96.42 E-value=0.017 Score=63.31 Aligned_cols=105 Identities=16% Similarity=0.238 Sum_probs=80.1
Q ss_pred HHHHHHHHHHHHHHHHHHhhh---------hHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCcc---hhhHHhHHHHHHH
Q 005249 72 PMLILSSVLYFVSGLVMLWSP---------NVYVLCIARLLDGFGVGLAVTLVPLYISETAPSE---IRGRLNTLPQFTG 139 (706)
Q Consensus 72 rvLlig~iL~aIgsll~a~a~---------s~~lLli~R~L~GIg~G~~~~~~~a~IsE~fP~k---~Rg~a~Gi~~ag~ 139 (706)
|++.++.+++.+|.++..++. +.+.++++.++.++|.|+.=+...++.+|.++++ +|......+..+.
T Consensus 2 ktI~~g~~~~~~G~~ll~l~~~~~~~~~~~~~~~~~~gL~lia~G~G~~K~ni~~~~~dq~~~~~~~~~~~~F~~fY~~i 81 (372)
T PF00854_consen 2 KTILLGSIVYLLGHVLLTLSAIPPSLPSGIQLGLFYIGLALIAVGTGGIKPNISPFGADQYDEDDDSRRDSFFNWFYWGI 81 (372)
T ss_dssp HHHHHHHHHHHHHHHH--HHHTSSSC------CHHHHHHHHHHHHHHCCHHHHHHHHHHCSSTTTTTHHHHHHHHHHHHH
T ss_pred HhhhHHHHHHHHHHHHhHHHHhcchhhhhHHHHHHHHHHHHHHhccccccccHHHHHHHHhcccchhhhhhhHHHHHHHH
Confidence 567788888888888854432 2367888899999999999999999999999976 3566778889999
Q ss_pred HHHHHHHHHHHHHHHHhccchhhHHHHHHHHHHHHHHHH
Q 005249 140 SGGMFLAYCMVFGMSLLASPSWRLMLGVLSIPALLYFAF 178 (706)
Q Consensus 140 ~LG~alg~ll~~~l~l~~~~GWR~~FlI~ail~LV~~ll 178 (706)
++|.+++..+. .+..++.+|.+.|.+.++..++..+.
T Consensus 82 n~G~~~~~~~~--~~i~~~~~~~~~f~i~~~~~~~~~~~ 118 (372)
T PF00854_consen 82 NIGSLFSPTLV--PYIQQNYGWFLGFGIPAIGMLLALIV 118 (372)
T ss_dssp HHHHHHHHHCC--CHHHHCS-HHHHHHHHHHHHHHHHHH
T ss_pred hhhhHhhcccc--hhhccccchhhhhhHHHHHHHHHHHH
Confidence 99999984443 33446789999998888877765543
No 262
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=96.30 E-value=0.13 Score=58.29 Aligned_cols=145 Identities=15% Similarity=0.093 Sum_probs=104.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhCChHHHHHHHHHHHHHHHHH
Q 005249 9 IAATIGNFLQGWDNATIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVM 88 (706)
Q Consensus 9 iil~L~~fl~gl~~~iis~~lp~I~q~fGLS~s~igLl~S~~~Ig~~Igsl~~G~LaDR~GRRrvLlig~iL~aIgsll~ 88 (706)
+...++..+.+++...++..+..+...-|++...+|.+-++..+....+.++..++.+|+|..|.=.++...-.++..++
T Consensus 261 flas~alalLY~TVLsf~~lmt~yl~~~G~s~~~igi~R~~gav~Gl~gT~~~p~l~~riGlvr~G~~~l~~q~~~L~~~ 340 (432)
T PF06963_consen 261 FLASFALALLYFTVLSFGGLMTAYLKSQGYSPSVIGIFRGLGAVFGLLGTWVYPWLMKRIGLVRAGLWSLWWQWVCLALC 340 (432)
T ss_pred HHHHHHHHHHHHHHhcCcHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHHH
Confidence 34445555555555556666667777779999999999999999999999999999999998887777665544443333
Q ss_pred Hh---h---h----hHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCcchhhHHhHHHHHHHHHHHHHHHHHHHHH
Q 005249 89 LW---S---P----NVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGM 153 (706)
Q Consensus 89 a~---a---~----s~~lLli~R~L~GIg~G~~~~~~~a~IsE~fP~k~Rg~a~Gi~~ag~~LG~alg~ll~~~l 153 (706)
.. . + +...++.+-.+.-+|.=+......-++.|..|.++||...|.-.+..++-.++..++....
T Consensus 341 v~~~~~~~~~~~~~s~~~l~~gi~~SR~GLW~fDL~~~qi~Qe~V~~~~Rg~v~gvq~sl~~lf~ll~~~~~ii~ 415 (432)
T PF06963_consen 341 VVSFWAPGSPFSSISAYLLLGGIALSRIGLWSFDLAVTQIMQENVPESERGAVSGVQNSLQSLFELLSFVLTIIF 415 (432)
T ss_pred HHHHhcCCCCchhhHHHHHHHHHHHHHHHHHhhhHHHHHhhcccCCHHHhhHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 32 1 1 3334444444445555455566777889999999999999999999988888876655444
No 263
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=96.23 E-value=0.11 Score=57.43 Aligned_cols=125 Identities=20% Similarity=0.225 Sum_probs=76.7
Q ss_pred HHHHHhhhcchHHHHhHHHHHHHHHHHHHHHhhhhhhhhhHHHH--HHHHHHHHHHHHhhcccccchhhhhcc----cCC
Q 005249 550 AMKLMDVAGRRKLLLTTIPVLIVSLIILVISETLQLISPVLKAG--ISTACVIIYFCCFVAAYGPIPNILCAE----IFP 623 (706)
Q Consensus 550 ~~~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~e----~~p 623 (706)
.|.+.||+|||+..++..++..++++.--... .. .+..+ +.-+...+.+..|-. | ++.| -+|
T Consensus 89 ~G~laD~~Grk~~cl~~cily~~scl~k~~~~-~~----~L~~GRvlgGiaTSLLfS~FEs------W-~V~Eh~~~g~~ 156 (354)
T PF05631_consen 89 VGSLADRYGRKKACLLFCILYSLSCLTKHSSN-YP----VLLLGRVLGGIATSLLFSAFES------W-MVHEHNKRGFP 156 (354)
T ss_pred HHHHHHhcCchHHHHHHHHHHHHHHHHHhccc-cH----HHHHHHHHHHHHHHHHHHHHHH------H-HHHHHHHcCCC
Confidence 89999999999999988888887776432211 11 11100 111111222222221 1 2333 357
Q ss_pred cchhhhHHHHHH-HHHHHHHHHHHhHHHHHHHhhch--hhHHHHHHHHHHHHHHHHHhcccCCCCC
Q 005249 624 TKVRGICIAICA-MAYWICDIIVTYTLPVMLSSIGL--AGAFGVYAVVCFISWVFVFLRVPETKGM 686 (706)
Q Consensus 624 ~~~r~~~~~~~~-~~~~~~~~i~~~~~~~~~~~~g~--~~~~~~~~~~~~~~~~~~~~~~~et~~~ 686 (706)
.+..+...+... ..+.+..++..++.-.+.+..|. ..+|..-.+++.++.+++...-+|..|.
T Consensus 157 ~~~L~~tF~~~tf~~n~~vAI~aGv~a~~l~~~~~~g~vaPF~~a~~~l~~~~~~I~~~W~ENyg~ 222 (354)
T PF05631_consen 157 QEWLSDTFSLATFFGNGVVAIGAGVVANVLADWFGFGPVAPFDAAIVLLAVAAVLILKTWPENYGD 222 (354)
T ss_pred hHHHHHHHHHHHHHHhHHHHHHHhHHHHHHHHHhCCCCcchHHHHHHHHHHHHHHHHhcccccCCC
Confidence 776666666655 33455566666777777776654 7788888888888888887777887765
No 264
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=96.11 E-value=0.046 Score=61.74 Aligned_cols=129 Identities=18% Similarity=0.229 Sum_probs=86.6
Q ss_pred HHHHHhhh-----cchHHHHhHHHHHHHHHHHHHHHhhhhhhhhhHHHHHHHHHHHHHHHHhhcccc-cchhhhhcccC-
Q 005249 550 AMKLMDVA-----GRRKLLLTTIPVLIVSLIILVISETLQLISPVLKAGISTACVIIYFCCFVAAYG-PIPNILCAEIF- 622 (706)
Q Consensus 550 ~~~l~d~~-----grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~e~~- 622 (706)
.|.++|-+ .||+.++++..+..++.+.++...... .....+.++++...++.... -+.-++++|..
T Consensus 44 ~g~lsD~~pi~G~rr~~Y~~i~~~~~~~~~~~~~~~~~~~-------~s~~~~~~~l~la~~g~a~~DV~aDa~vvE~~~ 116 (433)
T PF03092_consen 44 YGLLSDSFPIFGYRRKPYMIIGWLLGAVSALVLALLPASE-------SSAAIAVVLLFLASFGYAFADVAADALVVELAR 116 (433)
T ss_pred HHhhcccccccCCcchHHHHHHHHHHHHHHHHHHhccccc-------chhhhHHHHHHHHHHHHHHHHHhhhHHHHHHhh
Confidence 78999987 466777777666655565555543311 01112222333333333222 23334555654
Q ss_pred --CcchhhhHHHHHHHHHHHHHHHHHhHHHHHHHhhchhhHHHHHHHHHHHHHHHHHhcccCCCCC
Q 005249 623 --PTKVRGICIAICAMAYWICDIIVTYTLPVMLSSIGLAGAFGVYAVVCFISWVFVFLRVPETKGM 686 (706)
Q Consensus 623 --p~~~r~~~~~~~~~~~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~et~~~ 686 (706)
|.+ +|.-.+.+..+..+|++++.++.|.+.+..+++..|.+.+.+.++..+..++..+|.+.+
T Consensus 117 ~~p~~-~g~lqS~~~~~~~~G~lv~~~l~G~l~~~~~~~~~f~i~~~~~~l~~~~~~~~~~e~~~~ 181 (433)
T PF03092_consen 117 REPES-RGDLQSFVWGVRSVGSLVGSLLSGPLLDSFGPQGVFLISAALPLLMLIVALFLLEERKVR 181 (433)
T ss_pred cCCch-hHHHHHHHHHHHHHHHHHHHHhhhhhhhcCCCeEEehHHHHHHHHHHHHHHHhhhhcccc
Confidence 555 888899999999999999999999999999999999999888888877777777774333
No 265
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=96.05 E-value=0.11 Score=61.95 Aligned_cols=126 Identities=16% Similarity=0.181 Sum_probs=84.7
Q ss_pred HHHHHhh-hcchHHHHhHHHHHHHHHHHHHHHhhhhhhhhhHHHHHHHHHHHHHHHHhhcc-cccchhhhhcccCCcc--
Q 005249 550 AMKLMDV-AGRRKLLLTTIPVLIVSLIILVISETLQLISPVLKAGISTACVIIYFCCFVAA-YGPIPNILCAEIFPTK-- 625 (706)
Q Consensus 550 ~~~l~d~-~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~e~~p~~-- 625 (706)
.+++.|+ +||++.++++.++..++.+++.+........+ ....+..+.++++..+.+ .-|-..+...+.++++
T Consensus 43 Gg~iAD~~lG~~~tIl~~~ii~~lG~~llai~a~~~~~~~---~~~~~~l~gLaLia~G~GgiKp~vsaf~gdqf~~~~~ 119 (654)
T TIGR00926 43 GAIIADGWLGKFKTILYLSIVYVVGHALLSFGAIPSSGHP---LHDLLDLLGLALIALGTGGIKPCVSAFGGDQFEERQL 119 (654)
T ss_pred HHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccCcccccc---hHHHHHHHHHHHHHhhccccccCchhhhHhhcCccch
Confidence 6889998 69999999998888888877765322110000 011112222333333332 2345556777888653
Q ss_pred -hhhhHHHHHHHHHHHHHHHHHhHHHHHHHhh-------chhhHHHHHHHHHHHHHHHHHh
Q 005249 626 -VRGICIAICAMAYWICDIIVTYTLPVMLSSI-------GLAGAFGVYAVVCFISWVFVFL 678 (706)
Q Consensus 626 -~r~~~~~~~~~~~~~~~~i~~~~~~~~~~~~-------g~~~~~~~~~~~~~~~~~~~~~ 678 (706)
.|-....+..++.++|+++++.+.+.+.+.. +|..+|.+.+++++++.++.+.
T Consensus 120 ~~~~s~F~~fY~~iNiGSlis~~i~~~l~~~~~~fg~~~~~~~aF~i~~i~m~ia~lvf~~ 180 (654)
T TIGR00926 120 SLRSRFFSFFYFAINAGSLISTIITPILRGDVGCFGCQDCYPLAFGVPAILMILALIVFMA 180 (654)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcchHHHHHHHHHHHHHHHHHHHH
Confidence 3667888999999999999999999887554 5888898888888888777654
No 266
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=96.00 E-value=0.14 Score=56.60 Aligned_cols=135 Identities=13% Similarity=0.147 Sum_probs=100.4
Q ss_pred HHHHHHHHHHHHHHhhhhCChHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCcchhhH
Q 005249 51 LIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVMLWSPNVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGR 130 (706)
Q Consensus 51 ~Ig~~Igsl~~G~LaDR~GRRrvLlig~iL~aIgsll~a~a~s~~lLli~R~L~GIg~G~~~~~~~a~IsE~fP~k~Rg~ 130 (706)
.-.+.+.-++.=.+.|-.-.|+++++-.+...+..++..+.++.+.+-+.-++.|...+.- .+.++|+-+..+++++-+
T Consensus 52 TYSYLv~LvpvFlLTD~lrYKPvivlq~ls~v~~w~~lv~g~sV~~mQvlE~FyG~~tAaE-IAYysYIYs~Vd~~~Yqr 130 (433)
T KOG3810|consen 52 TYSYLVGLVPVFLLTDYLRYKPVVVLQALSGVPVWIMLVFGPSVKAMQVLEFFYGPATAAE-IAYYSYIYSKVDPEMYKR 130 (433)
T ss_pred hHHHHHHHHHHHHHhhhhhcceeeeeeccchhHHHHHHHhcCCchheeeehhhcChHHHHH-HhhhheeeeecCHHHHHH
Confidence 3355666666668899999999999888888888888999999999999999999976654 678899999999999999
Q ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHhhccCCc
Q 005249 131 LNTLPQFTGSGGMFLAYCMVFGMSLLASPSWRLMLGVLSIPALLYFAFAVFFLPESP 187 (706)
Q Consensus 131 a~Gi~~ag~~LG~alg~ll~~~l~l~~~~GWR~~FlI~ail~LV~~ll~~lflpEsp 187 (706)
+.|.-.++.-.|...|...+-........++..+=++......+ ..+.-+++|..+
T Consensus 131 vt~y~RaA~L~g~~~g~vlaQlLvs~~~~sy~~LN~ISL~~~~i-a~~~A~fLP~v~ 186 (433)
T KOG3810|consen 131 VTGYCRAAFLVGKFVGSVLAQLLVSLETLSYTTLNYISLAEVTI-AVLLALFLPRVK 186 (433)
T ss_pred HHHHhHHHHHHHhHHHhHHHHHHhhhcccchhhhchhhHHHHHH-HHHHHhhCCCCc
Confidence 99999988888888886665555444444555444333332222 334456677654
No 267
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=95.95 E-value=4.2 Score=46.39 Aligned_cols=53 Identities=9% Similarity=-0.082 Sum_probs=35.1
Q ss_pred hHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCcchhhHHhHHHHHHHHHHHHHHHHHH
Q 005249 93 NVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMV 150 (706)
Q Consensus 93 s~~lLli~R~L~GIg~G~~~~~~~a~IsE~fP~k~Rg~a~Gi~~ag~~LG~alg~ll~ 150 (706)
.++..++.-++.|++.+........+.+ .+|++ .++.+..+.+++.+++.+..
T Consensus 105 ~f~~~~~~v~~~g~~~~~~q~s~~gla~-~fp~~----~~~a~~~G~g~aGv~~s~~~ 157 (437)
T TIGR00939 105 FFVTTMASVVIINSGMALLQGSLFGLAG-VFPST----YSSAVMSGQGLAGVLTSLAM 157 (437)
T ss_pred HHHHHHHHHHHHHhhhhhhcccchhhcc-cCCHH----HHHHHHhcchhHHHHHHHHH
Confidence 5677777788899998888877776666 56644 34455555566655554443
No 268
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=95.64 E-value=0.54 Score=54.23 Aligned_cols=144 Identities=16% Similarity=0.146 Sum_probs=85.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH--cCCChhHHHHHHHH---HHHHHHHHHHHHHHHhhhhCChHHHHH-HHHHHHH
Q 005249 10 AATIGNFLQGWDNATIAGAIVYIKKD--LNLGTTVEGLVVAM---SLIGATAITTCSGPISDWLGRRPMLIL-SSVLYFV 83 (706)
Q Consensus 10 il~L~~fl~gl~~~iis~~lp~I~q~--fGLS~s~igLl~S~---~~Ig~~Igsl~~G~LaDR~GRRrvLli-g~iL~aI 83 (706)
++.+.+++.+...+.....+|.+.++ -++|.++.+.+.-+ |.+=..-+.++=.....|+||||..++ .=.+.++
T Consensus 4 lL~~LY~lQGiP~GL~~gsiPflL~~~~~~~sy~q~~~fSla~~PfSlKlLWaPiVDs~y~~~~GRRKSWiiP~Q~l~g~ 83 (544)
T PF13000_consen 4 LLVLLYFLQGIPLGLAFGSIPFLLQSMAKKVSYSQQAIFSLASYPFSLKLLWAPIVDSVYSKRIGRRKSWIIPIQYLSGI 83 (544)
T ss_pred HHHHHHHHcCcccccccccchhhhccccCCCChhHheeeeeeechhHHHHhhhhhhhhhcccccCCcchhhhHHHHHHHH
Confidence 45667778888777755677999988 78898888754322 222222233333444558999986543 2222222
Q ss_pred HHHHHHhhh----------------------h--HHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCcchhhHHhHHHHHHH
Q 005249 84 SGLVMLWSP----------------------N--VYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTG 139 (706)
Q Consensus 84 gsll~a~a~----------------------s--~~lLli~R~L~GIg~G~~~~~~~a~IsE~fP~k~Rg~a~Gi~~ag~ 139 (706)
..+..+..- + ...+....++.=+-++.--.++-.+...+..+++++.|..-...+.
T Consensus 84 ~m~~l~~~i~~~~~~~~~~d~~~~~~~~~~~~~~i~~Lt~~F~~L~fl~ATQDIAVDGWALT~Ls~~n~~~ASTcqtvG~ 163 (544)
T PF13000_consen 84 LMLYLSYNISQWLLFDGVDDALLGQGESTVNNITIKFLTWFFFILVFLCATQDIAVDGWALTMLSPENVGYASTCQTVGQ 163 (544)
T ss_pred HHHHHHhccchhhcccccchhhhcCCCCcccccchhHHHHHHHHHHHHHccCCceeehhhhhhcChhhcchHHHHHHhHh
Confidence 222222111 1 1122233333334444445556677777888899999999888888
Q ss_pred HHHHHHHHHHHHHH
Q 005249 140 SGGMFLAYCMVFGM 153 (706)
Q Consensus 140 ~LG~alg~ll~~~l 153 (706)
++|.+++......+
T Consensus 164 ~~Gyfls~tvFlal 177 (544)
T PF13000_consen 164 TAGYFLSFTVFLAL 177 (544)
T ss_pred hhhHHHHHHHHHhh
Confidence 88888886554443
No 269
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=95.32 E-value=0.3 Score=55.05 Aligned_cols=116 Identities=16% Similarity=0.103 Sum_probs=81.6
Q ss_pred cCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhCChHHHHHHHHHHHHH---HHHHHhhhhHHHHHHHHHHHHHHHHhHH
Q 005249 36 LNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVS---GLVMLWSPNVYVLCIARLLDGFGVGLAV 112 (706)
Q Consensus 36 fGLS~s~igLl~S~~~Ig~~Igsl~~G~LaDR~GRRrvLlig~iL~aIg---sll~a~a~s~~lLli~R~L~GIg~G~~~ 112 (706)
+.-...++.+...+|.+|-.++.--...+ |+-+-+++.+.-++..+. ....-+.++.|.+++..+..|+..|..+
T Consensus 276 ~~~~r~~Y~~Y~~~YQ~GVFISRSS~~~~--rir~lwils~LQ~~nl~~~~l~s~~~fipsi~ivf~lif~eGLlGGa~Y 353 (402)
T PF02487_consen 276 FFSPRDQYRWYQLLYQLGVFISRSSLPFF--RIRRLWILSLLQVINLVFLLLQSWYRFIPSIWIVFVLIFYEGLLGGASY 353 (402)
T ss_pred CCCHHHHHHHHHHHHHHHHhhhhcceeee--ehhhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhHHH
Confidence 33345778888888888877764322211 332222222222222222 2223346789999999999999999999
Q ss_pred HHHHHHHHhcCCcchhhHHhHHHHHHHHHHHHHHHHHHHHH
Q 005249 113 TLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGM 153 (706)
Q Consensus 113 ~~~~a~IsE~fP~k~Rg~a~Gi~~ag~~LG~alg~ll~~~l 153 (706)
+-....+.|-.|+++|..++|....+-.+|.+++.++....
T Consensus 354 VNtF~~I~~~~~~~~REFslg~vsvsds~GI~lAgll~l~l 394 (402)
T PF02487_consen 354 VNTFYRISEEVPPEDREFSLGAVSVSDSLGILLAGLLGLPL 394 (402)
T ss_pred HHHHHHHHhcCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999987666544
No 270
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=95.03 E-value=1.6 Score=50.07 Aligned_cols=95 Identities=22% Similarity=0.237 Sum_probs=72.7
Q ss_pred HHHHHHHHHHHHHHh---hhhCChHHHHHHHHHHHHHHHHHHhh------------------hhHHHHHHHHHHHHHHHH
Q 005249 51 LIGATAITTCSGPIS---DWLGRRPMLILSSVLYFVSGLVMLWS------------------PNVYVLCIARLLDGFGVG 109 (706)
Q Consensus 51 ~Ig~~Igsl~~G~La---DR~GRRrvLlig~iL~aIgsll~a~a------------------~s~~lLli~R~L~GIg~G 109 (706)
.+|..++..+.+.+. +++|+++.+.++.++..++.++.-.. +++...+++-++.|++-+
T Consensus 289 g~g~v~~g~~~~~l~~rir~fg~~~~~~~~~~~~~~~~~li~l~~p~dap~~~t~~~~~~~~~~~~~~~ii~~l~G~~D~ 368 (461)
T KOG3098|consen 289 GLGEVIGGLDFSILSKRIRGFGRKPTVLIGIIIHLIGFLLIHLSFPNDAPLRPTDSPPLLFTPSYYLALIIGFLLGFGDA 368 (461)
T ss_pred hHHHHHHHHHHHHHhhhhhhcccCcchhHHHHHHHHHHHHHhccccccCCCCCCcccccccccchhHHHHHHHHHhhHHH
Confidence 344444555555555 56899999998888888887766542 246788888999999999
Q ss_pred hHHHHHHHHHHhcCCcchhhHHhHHHHHHHHHHHHHH
Q 005249 110 LAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLA 146 (706)
Q Consensus 110 ~~~~~~~a~IsE~fP~k~Rg~a~Gi~~ag~~LG~alg 146 (706)
......+.++...+ +++|..+.++.-.-..++..++
T Consensus 369 ~~~t~~~~ii~~~~-~~~~~~~fsi~kfyq~~~s~v~ 404 (461)
T KOG3098|consen 369 CFNTQRYVIIALLY-PDDRAQAFSLFKFYQSVASCVA 404 (461)
T ss_pred HHHHHHHHHHHHHh-cCchHHHHHHHHHHHHHHHHHH
Confidence 99999999999999 4568888888777777777665
No 271
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=94.62 E-value=12 Score=43.61 Aligned_cols=143 Identities=13% Similarity=0.151 Sum_probs=89.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHc---CCChhHHHHHHHHHHH-HHHHHHHHHHHHhhhhCChHHHHHHHHHHHH
Q 005249 8 AIAATIGNFLQGWDNATIAGAIVYIKKDL---NLGTTVEGLVVAMSLI-GATAITTCSGPISDWLGRRPMLILSSVLYFV 83 (706)
Q Consensus 8 liil~L~~fl~gl~~~iis~~lp~I~q~f---GLS~s~igLl~S~~~I-g~~Igsl~~G~LaDR~GRRrvLlig~iL~aI 83 (706)
++.+.+.+++..++.+..- .+++.+ ...+..+..+-....+ +..+..++..++++++++.+++-+....+..
T Consensus 26 ~~~l~~m~f~i~f~y~~lR----~~KD~lvvt~~gae~I~flK~~~vlP~a~~f~~~y~kl~n~~s~~~lFy~~~~~F~~ 101 (491)
T PF03219_consen 26 FLPLALMFFFILFNYTILR----DLKDTLVVTAQGAEVIPFLKVWGVLPVAILFTILYSKLSNRLSREKLFYIIIIPFLG 101 (491)
T ss_pred HHHHHHHHHHHHHHHHHHH----HhcCeEEEecCChhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHH
Confidence 3444555555555444432 222222 1244555555554444 4455567889999999999999887777777
Q ss_pred HHHHHHhh---------h----------------------hHHHHHHHHHHHHHHHHhHHH-HHHHHHHhcCCcchhhHH
Q 005249 84 SGLVMLWS---------P----------------------NVYVLCIARLLDGFGVGLAVT-LVPLYISETAPSEIRGRL 131 (706)
Q Consensus 84 gsll~a~a---------~----------------------s~~lLli~R~L~GIg~G~~~~-~~~a~IsE~fP~k~Rg~a 131 (706)
...++++. + +.|...+..++.-+-.....+ .-+.+..|.++.++-.+.
T Consensus 102 fF~~f~~vlyP~~~~lhp~~~~~~~~~~~~~~~~~~i~~~~~Wt~slfYv~aElwgsvvlSlLFW~fAN~itt~~eAKRf 181 (491)
T PF03219_consen 102 FFALFAFVLYPNRDILHPDAFADKLLAILPPGFKGFIAMFRNWTFSLFYVMAELWGSVVLSLLFWGFANEITTVEEAKRF 181 (491)
T ss_pred HHHHHHHHHhhchhhcCCCHHHHHhhhhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHH
Confidence 66666652 0 112222333333333333333 457888999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHH
Q 005249 132 NTLPQFTGSGGMFLAYCMVFGMS 154 (706)
Q Consensus 132 ~Gi~~ag~~LG~alg~ll~~~l~ 154 (706)
.+++..+.++|.++++.......
T Consensus 182 Ypl~g~ganigli~sG~~~~~~~ 204 (491)
T PF03219_consen 182 YPLFGLGANIGLIFSGQLTSYFS 204 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999866655543
No 272
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=94.38 E-value=0.37 Score=47.44 Aligned_cols=112 Identities=20% Similarity=0.266 Sum_probs=66.1
Q ss_pred HHHHHhhhcchHHHHhHHHHHHHHHHHHHHHhhhhhhhhhHHHHHHHHHHHHHHHHhhcccccchhhhhcccCCc-chhh
Q 005249 550 AMKLMDVAGRRKLLLTTIPVLIVSLIILVISETLQLISPVLKAGISTACVIIYFCCFVAAYGPIPNILCAEIFPT-KVRG 628 (706)
Q Consensus 550 ~~~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~-~~r~ 628 (706)
.|.+.||.|||+.++.+.....++.++..+... . ..+........ .........+....+..|.+|. +.|+
T Consensus 59 ~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~-~------~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (338)
T COG0477 59 AGPLGDRYGRRKVLIIGLLLFLLGTLLLALAPN-V------GLALLLILRLL-QGLGGGGLLPVASALLSEWFPEATERG 130 (338)
T ss_pred hhhccccccchHHHHHHHHHHHHHHHHHHhCcc-c------hHHHHHHHHHH-HHhhhHHHHHHHHHHHHHhcCchhHHH
Confidence 799999999997777776553443333322221 0 01111111111 1111123456777888999998 6788
Q ss_pred hHHHHHHH-HHHHHHHHHHhHHHHHHHh--hchhhHHHHHHHHH
Q 005249 629 ICIAICAM-AYWICDIIVTYTLPVMLSS--IGLAGAFGVYAVVC 669 (706)
Q Consensus 629 ~~~~~~~~-~~~~~~~i~~~~~~~~~~~--~g~~~~~~~~~~~~ 669 (706)
...++... ...++.++++.+.+.+... .+|+..|.+.....
T Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (338)
T COG0477 131 LAVGLVTLGAGALGLALGPLLAGLLLGALLWGWRAAFLLAALLG 174 (338)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHH
Confidence 88888888 5777778887666666554 56776555444444
No 273
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=93.81 E-value=0.5 Score=54.41 Aligned_cols=129 Identities=10% Similarity=0.005 Sum_probs=84.9
Q ss_pred HHHHHhhhcc-hHHHHhHHHHHHHHHHHHHHHhhhhhhhhhHHHHHHHHHHHHHHHHhhcccccchhhhhcccCCcchhh
Q 005249 550 AMKLMDVAGR-RKLLLTTIPVLIVSLIILVISETLQLISPVLKAGISTACVIIYFCCFVAAYGPIPNILCAEIFPTKVRG 628 (706)
Q Consensus 550 ~~~l~d~~gr-r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~ 628 (706)
.++...|.+. |+.++++.++++++.++.......+ +....+..+.=+.++++.+...+.=.|++..--.+.|.
T Consensus 91 F~~Ws~k~~~~k~Pli~s~ii~~~g~llY~~l~~~~------~~~~y~mL~~R~l~Gvg~~n~a~lR~Y~a~~s~~~dR~ 164 (488)
T KOG2325|consen 91 FGIWSNKTGSVKKPLIVSFLIAIIGNLLYLALAYVP------NGVKYLMLVARILTGVGVGNFAVLRAYIADASTVEDRP 164 (488)
T ss_pred hcccccccCCcccCHHHHHHHHHHHHHHHHHHHhcc------cchHHHHHHHHHHcCcCcccHHHHHHHHHhccCccchH
Confidence 6667777774 6667788888888888885555444 11222222233333334344455557888877777788
Q ss_pred hHHHHHHHHHHHHHHHHHhHHHHHHHhh-------------chhhHHHHHHHHHHHHHHHHHhcccCCC
Q 005249 629 ICIAICAMAYWICDIIVTYTLPVMLSSI-------------GLAGAFGVYAVVCFISWVFVFLRVPETK 684 (706)
Q Consensus 629 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~-------------g~~~~~~~~~~~~~~~~~~~~~~~~et~ 684 (706)
++++..+...-++.++||.+.+...... -+..+-|+.++++++.+++.+++++|-.
T Consensus 165 rA~a~~~~~~vlg~ilGp~~q~~f~~Lg~~G~~i~~~~~~n~YTap~w~m~i~~i~~~v~i~~~f~E~~ 233 (488)
T KOG2325|consen 165 RAFAATSGGFVLGIILGPTIQLAFTPLGEKGFMILPGLIFNMYTAPAWLMAILWIIYIVIILFFFKEVY 233 (488)
T ss_pred HHHHHhhhHHHHHHHHhHHHHHHHhhhcCCceEEcCcceEEecchHHHHHHHHHHHHHHHHHhheeecc
Confidence 8888888877778777777665543211 1445778889999999998888887754
No 274
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=93.50 E-value=0.44 Score=52.23 Aligned_cols=118 Identities=13% Similarity=0.147 Sum_probs=78.6
Q ss_pred HHHHhHHHHHHHHHHHHHHHhhhhhhhhhHHHHHHHHHHHHHHHHhhccc-ccchhhhhcccCCcc---hhhhHHHHHHH
Q 005249 561 KLLLTTIPVLIVSLIILVISETLQLISPVLKAGISTACVIIYFCCFVAAY-GPIPNILCAEIFPTK---VRGICIAICAM 636 (706)
Q Consensus 561 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~e~~p~~---~r~~~~~~~~~ 636 (706)
+.++++.++.+++.+++.+................. +.++....+.|. =|...++.++.++++ .|.........
T Consensus 2 ktI~~g~~~~~~G~~ll~l~~~~~~~~~~~~~~~~~--~gL~lia~G~G~~K~ni~~~~~dq~~~~~~~~~~~~F~~fY~ 79 (372)
T PF00854_consen 2 KTILLGSIVYLLGHVLLTLSAIPPSLPSGIQLGLFY--IGLALIAVGTGGIKPNISPFGADQYDEDDDSRRDSFFNWFYW 79 (372)
T ss_dssp HHHHHHHHHHHHHHHH--HHHTSSSC------CHHH--HHHHHHHHHHHCCHHHHHHHHHHCSSTTTTTHHHHHHHHHHH
T ss_pred HhhhHHHHHHHHHHHHhHHHHhcchhhhhHHHHHHH--HHHHHHHhccccccccHHHHHHHHhcccchhhhhhhHHHHHH
Confidence 456777888888888876665544221111212222 222223333332 256667888988765 45668888899
Q ss_pred HHHHHHHHHHhHHHHHHHhhchhhHHHHHHHHHHHHHHHHHhcc
Q 005249 637 AYWICDIIVTYTLPVMLSSIGLAGAFGVYAVVCFISWVFVFLRV 680 (706)
Q Consensus 637 ~~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 680 (706)
..++|..++....+++-+..||...|++.++..+++.+.++.-.
T Consensus 80 ~in~G~~~~~~~~~~i~~~~~~~~~f~i~~~~~~~~~~~f~~~~ 123 (372)
T PF00854_consen 80 GINIGSLFSPTLVPYIQQNYGWFLGFGIPAIGMLLALIVFLSGR 123 (372)
T ss_dssp HHHHHHHHHHHCCCHHHHCS-HHHHHHHHHHHHHHHHHHHHCCC
T ss_pred HHhhhhHhhcccchhhccccchhhhhhHHHHHHHHHHHHHHhCC
Confidence 99999999999999999999999999999999888888776643
No 275
>KOG3880 consensus Predicted small molecule transporter involved in cellular pH homeostasis (Batten disease protein in human) [General function prediction only]
Probab=91.12 E-value=3.1 Score=45.67 Aligned_cols=139 Identities=15% Similarity=0.066 Sum_probs=85.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhCChHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhHHHHHHHHHHhc
Q 005249 43 EGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVMLWSPNVYVLCIARLLDGFGVGLAVTLVPLYISET 122 (706)
Q Consensus 43 igLl~S~~~Ig~~Igsl~~G~LaDR~GRRrvLlig~iL~aIgsll~a~a~s~~lLli~R~L~GIg~G~~~~~~~a~IsE~ 122 (706)
.|.+.-+-.+...+..+.+..+.||+.--.=..+..++.+.+.++.+++++.++-+++-.+..++.|........+.+.
T Consensus 64 tg~VLLaDilPsL~iKl~~Pff~~rfpf~~Ri~~~v~~sa~s~~lVafs~s~~~sL~GV~~aSissGlGEiTFL~lss~- 142 (409)
T KOG3880|consen 64 TGAVLLADILPSLAIKLTAPFFIHRFPFGFRIALVVLLSALSFFLVAFSNSVPMSLLGVVFASISSGLGEITFLALSSR- 142 (409)
T ss_pred cchhhhhhhhHHHHHHHhchhhhhhcccchHHHHHHHHHhcceEEEEeccchhHHHhhhhhhhhcCCcceeehhhhhcc-
Confidence 3444444455666666777788888754433444567777888889999999999999999999888876554444333
Q ss_pred CCcchhhHHhHHHHHHHHHHHHHHHHHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHhhccCC
Q 005249 123 APSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSWRLMLGVLSIPALLYFAFAVFFLPES 186 (706)
Q Consensus 123 fP~k~Rg~a~Gi~~ag~~LG~alg~ll~~~l~l~~~~GWR~~FlI~ail~LV~~ll~~lflpEs 186 (706)
+++ ...+-+..+.+.+..+|..-...+....+..-|...++...+.++.+...++.++++
T Consensus 143 Y~~----~~i~~WSSGTGgAGliGa~SYa~lT~~~~~spk~Tlli~l~lP~lfa~~yf~lL~~p 202 (409)
T KOG3880|consen 143 YPS----IVIAGWSSGTGGAGLIGASSYAFLTSWANLSPKSTLLIMLFLPALFAFAYFFLLKSP 202 (409)
T ss_pred CCC----ceeccccCCCCcchhhhhhHHHHHhhhcCCChhhHHHHHHHHHHHHHHHHHheeCCC
Confidence 332 233445555666666664443333322345667777777666655444444444443
No 276
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=91.02 E-value=16 Score=42.44 Aligned_cols=179 Identities=11% Similarity=0.120 Sum_probs=112.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC---hhHHHHHHHHHHH-HHHHHHHHHHHHhhhhCChHHHHHHHHHHHH
Q 005249 8 AIAATIGNFLQGWDNATIAGAIVYIKKDLNLG---TTVEGLVVAMSLI-GATAITTCSGPISDWLGRRPMLILSSVLYFV 83 (706)
Q Consensus 8 liil~L~~fl~gl~~~iis~~lp~I~q~fGLS---~s~igLl~S~~~I-g~~Igsl~~G~LaDR~GRRrvLlig~iL~aI 83 (706)
.+.+++.+++..++.+.+ -.+++.+.++ +..+.++-+..-+ ++++..++..++.+++.+.+++.+....+..
T Consensus 29 flpl~Ll~f~I~~ny~~l----R~lKDslvv~~~gae~I~FlK~~~vlP~avif~~iy~kl~~~lt~~~vF~~~~~~F~~ 104 (509)
T COG3202 29 FLPLALLFFCILFNYNLL----RSLKDSLVVTRQGAESISFLKTWGVLPSAVIFTIIYQKLLNILTREKVFYIILGFFLG 104 (509)
T ss_pred HHHHHHHHHHHHHHHHHH----HHhhhheEeecCcchhhHHHHHHHhchHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHH
Confidence 334445555555555443 3455555544 4566667776666 6778888999999999999999988888888
Q ss_pred HHHHHHhh---------hh-----------------------HHHHHHHHHHHHHHHHhHHH-HHHHHHHhcCCcchhhH
Q 005249 84 SGLVMLWS---------PN-----------------------VYVLCIARLLDGFGVGLAVT-LVPLYISETAPSEIRGR 130 (706)
Q Consensus 84 gsll~a~a---------~s-----------------------~~lLli~R~L~GIg~G~~~~-~~~a~IsE~fP~k~Rg~ 130 (706)
..+++++. ++ .|...+...+.-+-...... .-+....|.+..++-.|
T Consensus 105 fF~LFa~Vi~P~~~~~hp~~~~~~~~~~~~p~~l~~~ili~~~Ws~s~~Yi~aELWgslV~S~lFw~faNeitt~~eakR 184 (509)
T COG3202 105 FFALFAFVIYPYKDILHPDPEFSRDLFADLPMFLKWFILIVGEWSYSLFYIMAELWGSLVLSLLFWQFANEITTIEEAKR 184 (509)
T ss_pred HHHHHHHHHhccccccCCCHHHHHHHHhhCCccceeeeEeecchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHhhh
Confidence 88888762 01 13333333333333333333 45678889999999999
Q ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHhcc--------chhhHHHHHHHHHHHHHHHHHHhh---ccCCchhh
Q 005249 131 LNTLPQFTGSGGMFLAYCMVFGMSLLAS--------PSWRLMLGVLSIPALLYFAFAVFF---LPESPRWL 190 (706)
Q Consensus 131 a~Gi~~ag~~LG~alg~ll~~~l~l~~~--------~GWR~~FlI~ail~LV~~ll~~lf---lpEsp~~l 190 (706)
..++++.+.+++..++..+.....-... ..-+..+.+.++.++++..+..+. +.+.|+..
T Consensus 185 Fy~lf~l~~ni~lllsg~~~~~~~k~~~~~~~~~~~~~~~~~~~vi~~~~~i~~~l~~~~~r~il~~~~f~ 255 (509)
T COG3202 185 FYPLFGLGANISLLLSGEVTSWLSKHRDALASEFKDLLLQILFIVIVILGIIAILLYRYINRNVLTDPLFY 255 (509)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHhhchhhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCcchh
Confidence 9999999999999998766655532111 123445555555555544433322 34445543
No 277
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=90.66 E-value=4.7 Score=46.51 Aligned_cols=105 Identities=13% Similarity=0.065 Sum_probs=68.2
Q ss_pred HHHHHhhhcchHHHHhHHHHHHHHHHHHHHHhhhh--hhhhh-------------HHHHH------HHHHHHHHHHHhhc
Q 005249 550 AMKLMDVAGRRKLLLTTIPVLIVSLIILVISETLQ--LISPV-------------LKAGI------STACVIIYFCCFVA 608 (706)
Q Consensus 550 ~~~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~-------------~~~~~------~~~~~~~~~~~~~~ 608 (706)
-+++++|++|++++-+.....++.+++++...... ...|. ....+ ...+..+..-.++.
T Consensus 64 y~~l~~~~~~~~lf~~~~~~F~~~f~lF~~vl~p~~~~~~p~~~~~~~~~~~~~~~~~~i~~~~~W~~~~FYv~~elw~~ 143 (472)
T TIGR00769 64 YTKLSNILSKEALFYTVISPFLGFFALFAFVIYPLSDLLHPTALADKLLSLLPPGFMGFIAILRIWSFALFYVMAELWGS 143 (472)
T ss_pred HHHHHhcCCHHHhHHHHHHHHHHHHHHHHHHHhcchhhcCCcHHHHHHHhhcchhhHHHHHHHhhhhHHHHHHHHHHHHH
Confidence 47899999999988877666666666555542211 11110 00011 11112222222333
Q ss_pred cccc-chhhhhcccCCcchhhhHHHHHHHHHHHHHHHHHhHHHHHHH
Q 005249 609 AYGP-IPNILCAEIFPTKVRGICIAICAMAYWICDIIVTYTLPVMLS 654 (706)
Q Consensus 609 ~~~~-~~~~~~~e~~p~~~r~~~~~~~~~~~~~~~~i~~~~~~~~~~ 654 (706)
...+ +.|.+++|++..++-.+-.++.....+++.++++.+...+.+
T Consensus 144 ~vvS~lFW~fandi~t~~qakRfy~l~~~ganlg~i~sg~~~~~~~~ 190 (472)
T TIGR00769 144 VVLSLLFWGFANQITTIDEAKRFYALFGLGANVALIFSGRTIKYFSK 190 (472)
T ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3334 778999999999999999999999999999999998887763
No 278
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=90.58 E-value=5.5 Score=45.20 Aligned_cols=97 Identities=10% Similarity=0.062 Sum_probs=68.0
Q ss_pred HHHHHhhhcchHHHHhHHHHHHHHHHHHHHHhhhhhhhhhHHHHHHHHHHHHHHHHhhcccccchhhhhcccCCcchhhh
Q 005249 550 AMKLMDVAGRRKLLLTTIPVLIVSLIILVISETLQLISPVLKAGISTACVIIYFCCFVAAYGPIPNILCAEIFPTKVRGI 629 (706)
Q Consensus 550 ~~~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~ 629 (706)
...+.|.+|-|+++++..+..++..+++.+..... ..-+.-++|+...+. -...+.|+--..|++.--+
T Consensus 61 vflltd~l~Ykpviil~~~~~i~t~~lll~~~sv~---------~mq~~q~~yg~~~a~--evay~sYiys~v~~~~yq~ 129 (412)
T PF01770_consen 61 VFLLTDYLRYKPVIILQALSYIITWLLLLFGTSVL---------AMQLMQFFYGLATAA--EVAYYSYIYSVVDKEHYQK 129 (412)
T ss_pred HHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHCcHH---------HHHHHHHHHHHHHHH--HHHHHHHheeecCHHHHHH
Confidence 78899999999999999888888877776643322 222233333333222 1233455666778888888
Q ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHhhc
Q 005249 630 CIAICAMAYWICDIIVTYTLPVMLSSIG 657 (706)
Q Consensus 630 ~~~~~~~~~~~~~~i~~~~~~~~~~~~g 657 (706)
+.+.+..+.-+|.+++..++-.+++.-+
T Consensus 130 vts~~raa~l~g~~~s~~lgQllvs~~~ 157 (412)
T PF01770_consen 130 VTSYTRAATLVGRFISSLLGQLLVSFGG 157 (412)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 9999999999999999988887777443
No 279
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=90.16 E-value=4.1 Score=40.03 Aligned_cols=93 Identities=6% Similarity=-0.058 Sum_probs=60.7
Q ss_pred HHHHHhhhcchHHHHhHHHHHHHHHHHHHHHhhhhhhhhhHHHHHHHHHHHHHHHHhhcccccchhhhhcccCCcchhhh
Q 005249 550 AMKLMDVAGRRKLLLTTIPVLIVSLIILVISETLQLISPVLKAGISTACVIIYFCCFVAAYGPIPNILCAEIFPTKVRGI 629 (706)
Q Consensus 550 ~~~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~ 629 (706)
++.+.+++|.|+.++++..+..+-....... +.+..+....+..++.+..|.+-. .++.+...++.+++
T Consensus 57 ~P~iv~~lg~K~sm~lg~~~y~~y~~~~~~~----------~~~~l~~~s~l~G~~~a~lW~aqg-~ylt~~s~~~~~~~ 125 (156)
T PF05978_consen 57 APSIVNKLGPKWSMILGSLGYAIYIASFFYP----------NSYTLYPASALLGFGAALLWTAQG-TYLTSYSTEETIGR 125 (156)
T ss_pred HHHHHHHHhhHHHHHHHHHHHHHHHHHHHhh----------hHHHHHHHHHHHhhhhHHhhHhhh-HHHHHcCCHHHHhh
Confidence 6788999999999988877666544443221 122333333344444444343333 36667888889999
Q ss_pred HHHHHHHHHHHHHHHHHhHHHHHH
Q 005249 630 CIAICAMAYWICDIIVTYTLPVML 653 (706)
Q Consensus 630 ~~~~~~~~~~~~~~i~~~~~~~~~ 653 (706)
..++...+...+.++|..+.-.+.
T Consensus 126 ~~~ifw~i~~~s~i~G~~~~~~~~ 149 (156)
T PF05978_consen 126 NTGIFWAIFQSSLIFGNLFLFFIF 149 (156)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999998888888877655443
No 280
>PRK03612 spermidine synthase; Provisional
Probab=89.89 E-value=10 Score=44.31 Aligned_cols=52 Identities=13% Similarity=0.254 Sum_probs=39.1
Q ss_pred hhhHHHHHHHHHHHHHHHHHhHHHHHHH-hhchhhHHHHHHHHHHHHHHHHHh
Q 005249 627 RGICIAICAMAYWICDIIVTYTLPVMLS-SIGLAGAFGVYAVVCFISWVFVFL 678 (706)
Q Consensus 627 r~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~ 678 (706)
-+...|-...+..+|+++|+.++++++- .+|...+..+.+++.++..++.++
T Consensus 143 ~g~~~g~ly~~ntlGa~~G~l~~~~vLlp~lG~~~t~~~~a~l~~~~a~~~~~ 195 (521)
T PRK03612 143 LGHNVATVLAADYLGALVGGLAFPFLLLPRLGLIRTAALTGSLNLLAALVFLW 195 (521)
T ss_pred hhhhhhhhHhHHhHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHH
Confidence 4567888899999999999999988876 578776777776666655544433
No 281
>COG4262 Predicted spermidine synthase with an N-terminal membrane domain [General function prediction only]
Probab=89.25 E-value=20 Score=40.20 Aligned_cols=151 Identities=15% Similarity=0.035 Sum_probs=88.1
Q ss_pred HHHHHH-cCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhCChHHHHHHHHHHH-------HHHHHHHh--hhhHHHHHH
Q 005249 30 VYIKKD-LNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYF-------VSGLVMLW--SPNVYVLCI 99 (706)
Q Consensus 30 p~I~q~-fGLS~s~igLl~S~~~Ig~~Igsl~~G~LaDR~GRRrvLlig~iL~a-------Igsll~a~--a~s~~lLli 99 (706)
..+..+ .|-+--+.+++.+.|.+.+.+|+...-++.|.--.-+.+..-.++.. +..+.+++ .++-+.+++
T Consensus 31 ~tLatyLlG~~Ilq~S~Iia~yl~amGlGs~~sry~~dd~~~~~Fv~vElllgligg~Sa~~ly~~FA~~~~~~~~Vly~ 110 (508)
T COG4262 31 GTLATYLLGGGILQTSLIIAGYLAAMGLGSLLSRYVLDDAALARFVDVELLLGLIGGVSAAALYLLFALESAPSRLVLYA 110 (508)
T ss_pred HHHHHHhcCCceeehHHHHHHHHHHhchhhhhhccccCchHHHHHHHHHHHHHHhccchHHHHHHHHHhccchHHHHHHH
Confidence 334444 35666889999999999999999988887775433322222121111 11112222 346678888
Q ss_pred HHHHHHHHHHhHHHHHHHHHHhcCCcchhhHHhHHHHHHHHHHHHHHHHHHHHHHHhccchhhHHHHHHHHHHHHHHHHH
Q 005249 100 ARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSWRLMLGVLSIPALLYFAFA 179 (706)
Q Consensus 100 ~R~L~GIg~G~~~~~~~a~IsE~fP~k~Rg~a~Gi~~ag~~LG~alg~ll~~~l~l~~~~GWR~~FlI~ail~LV~~ll~ 179 (706)
.-++.|.-.|.-.|....++..-. .+-....+.....-.+|+..+.+....... ...|.-..-...|++.++++++.
T Consensus 111 lt~vIG~LVG~EiPL~mrml~~r~--a~~k~~~s~vl~~DYLGal~~gLl~p~lll-P~LGl~rta~laG~~Nl~aAvv~ 187 (508)
T COG4262 111 LTAVIGVLVGAEIPLLMRMLQRRQ--AKAKDLGSRVLTLDYLGALAGGLLWPFLLL-PRLGLVRTAALAGLCNLAAAVVT 187 (508)
T ss_pred HHHHHHHHHhcchHHHHHHHHHHH--HHHHhhhhhhhhhHhhhhhhHHHHHHHHHh-hhhccHHHHHHHHHHHHHHHHHH
Confidence 899999999999999888877611 112223333334467777777555544432 22233222335666666666544
Q ss_pred Hhhc
Q 005249 180 VFFL 183 (706)
Q Consensus 180 ~lfl 183 (706)
.+.+
T Consensus 188 ~fll 191 (508)
T COG4262 188 LFLL 191 (508)
T ss_pred HHHH
Confidence 4433
No 282
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=88.39 E-value=12 Score=40.08 Aligned_cols=57 Identities=9% Similarity=0.236 Sum_probs=41.0
Q ss_pred chhhHHhHHHHHHHHHHHHHHHHHHHHH---HHhccchhhHHHHHHHHHHHHHHHHHHhh
Q 005249 126 EIRGRLNTLPQFTGSGGMFLAYCMVFGM---SLLASPSWRLMLGVLSIPALLYFAFAVFF 182 (706)
Q Consensus 126 k~Rg~a~Gi~~ag~~LG~alg~ll~~~l---~l~~~~GWR~~FlI~ail~LV~~ll~~lf 182 (706)
++|+..+.+...+.++|+++..++.... ......+|++++.+.+++.++.+++..++
T Consensus 2 k~K~~~s~~n~~gf~iG~ii~~ipF~~~~~~~~~~~~~W~~I~si~~lL~~IpLIly~if 61 (267)
T PF07672_consen 2 KKKSILSQFNPWGFNIGTIIVNIPFLISSSVVIALTNNWQWILSIFILLIFIPLILYIIF 61 (267)
T ss_pred CccceeeeeccccchhhHHHHHhhHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 5678888888999999999986665433 12223479999998888877766554444
No 283
>PF12832 MFS_1_like: MFS_1 like family
Probab=82.45 E-value=2.7 Score=36.37 Aligned_cols=45 Identities=24% Similarity=0.298 Sum_probs=33.5
Q ss_pred HHHHhhhhhhhhHhcHHHHHHhhhh----------------------HHHHHhhhcchHHHHhHHHH
Q 005249 525 QILQQFSGINGVLYYTPQILEQAGV----------------------AMKLMDVAGRRKLLLTTIPV 569 (706)
Q Consensus 525 ~~~~~~~g~~~~~~~~~~~~~~~g~----------------------~~~l~d~~grr~~~~~~~~~ 569 (706)
..+..+++...+.-|.|.++++.|+ .+.++||+++++..+....+
T Consensus 8 ~yf~~f~~~g~~~Pfl~~~~~~~Gl~~~~iGil~~i~~~~~~~~~pl~g~laDk~~~~~~~l~~~~~ 74 (77)
T PF12832_consen 8 FYFFYFAALGCLYPFLPLYLKQLGLSPSQIGILSAIRPLIRFLAPPLWGFLADKFGKRKVILLGSLF 74 (77)
T ss_pred HHHHHHHHHHHHHhhhhHhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCccHHHHHHHHH
Confidence 3344556667777888888887665 89999999999887765443
No 284
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=79.40 E-value=0.6 Score=54.56 Aligned_cols=133 Identities=14% Similarity=0.108 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHH-HHHHcCCChhHHHHHHHHHHH-HHHHHHHHHHHHhhhhC--ChHHHHHHHHHHHH
Q 005249 8 AIAATIGNFLQGWDNATIAGAIVY-IKKDLNLGTTVEGLVVAMSLI-GATAITTCSGPISDWLG--RRPMLILSSVLYFV 83 (706)
Q Consensus 8 liil~L~~fl~gl~~~iis~~lp~-I~q~fGLS~s~igLl~S~~~I-g~~Igsl~~G~LaDR~G--RRrvLlig~iL~aI 83 (706)
.+...++..+.......+..++|. +..+|++++++.+++..+..+ +.++|.+++|++..|+. .|..+..+.+...+
T Consensus 307 f~~~~la~~~~~~~~~G~~tF~pKylE~QF~~sas~A~~l~G~v~ip~~~~G~llGG~ivkk~kl~~~~~~~~~~v~~~v 386 (539)
T PF03137_consen 307 FMCLILAGVFESFIVSGFATFLPKYLESQFGLSASQASLLTGIVSIPGAALGILLGGYIVKKFKLSARGAAKFCIVVSIV 386 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHhhhhcchhheehheEEEEEEEecCcHHHHHHHHHHHHHH
Confidence 344455555555555555666664 666899999999998877766 77788999999999985 44444444444333
Q ss_pred HHHHHH---h--h-------------------------------------------------hhHHHHHHHHHHHHHHHH
Q 005249 84 SGLVML---W--S-------------------------------------------------PNVYVLCIARLLDGFGVG 109 (706)
Q Consensus 84 gsll~a---~--a-------------------------------------------------~s~~lLli~R~L~GIg~G 109 (706)
+.++.. + . +.+..+++..++.-+..+
T Consensus 387 ~~~~~~~~~~~~C~~~~~aGv~~~y~~~~~~~~~~~~~~~Cn~~~~~~~~~a~~G~C~~~C~~~~~~Fl~~~~~~~~~~~ 466 (539)
T PF03137_consen 387 SVILYSPLFFLGCPNPPIAGVTVPYHNSTSSSPSCNLTCSCNSCCSSGNGSATPGKCPSDCCNKLIPFLILLFILSFFTF 466 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHeecCCCCceeeecCccccccCCCCCCCCCCCCCCccCCCcccccCCCcCcccccccHHHHHHHHHHHHHHH
Confidence 333210 0 0 012333344444445555
Q ss_pred hHHHHHHHHHHhcCCcchhhHHhHHHHHHHH
Q 005249 110 LAVTLVPLYISETAPSEIRGRLNTLPQFTGS 140 (706)
Q Consensus 110 ~~~~~~~a~IsE~fP~k~Rg~a~Gi~~ag~~ 140 (706)
...++....+....|+++|+.++|+......
T Consensus 467 ~~~~p~~~i~LR~V~~~~rs~AlGv~~~~~r 497 (539)
T PF03137_consen 467 MSQVPSTLITLRCVPPEQRSFALGVQWLIIR 497 (539)
T ss_dssp -------------------------------
T ss_pred hcccchheeeeccCChhhcchhhhHHHHHHH
Confidence 5556666677788888999999988766544
No 285
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=79.05 E-value=44 Score=38.03 Aligned_cols=114 Identities=11% Similarity=-0.090 Sum_probs=59.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhCChHHHHHHHHH---HHHHHHH
Q 005249 11 ATIGNFLQGWDNATIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVL---YFVSGLV 87 (706)
Q Consensus 11 l~L~~fl~gl~~~iis~~lp~I~q~fGLS~s~igLl~S~~~Ig~~Igsl~~G~LaDR~GRRrvLlig~iL---~aIgsll 87 (706)
.++..+-..+..+.+....+++.+++-.+.. ...+...+.+.+.+..++...+--+...|.-..++..+ ..+..+.
T Consensus 23 ~~llGiG~LlpWN~fiTa~~y~~~~~~~~~~-~~~F~~~~~~~a~i~~ll~~~~n~~~~~~~~~~~~~~l~~~~il~i~~ 101 (406)
T KOG1479|consen 23 FLLLGIGTLLPWNMFITASDYYYYRFPGYHN-SKNFTSSYTLAAQIPLLLFNLLNAFLNTRLRTRVGYLLSLIAILFIVT 101 (406)
T ss_pred HHHHhcccccchHhhhccHHHHHhhcCCCch-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3333344445556666677788777755444 44455555555555555555554444433222222111 1111122
Q ss_pred HHhh---------hhHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCcc
Q 005249 88 MLWS---------PNVYVLCIARLLDGFGVGLAVTLVPLYISETAPSE 126 (706)
Q Consensus 88 ~a~a---------~s~~lLli~R~L~GIg~G~~~~~~~a~IsE~fP~k 126 (706)
+.++ ..++..++.-.+.+++.|......+...++. |++
T Consensus 102 l~~~~v~~~~~~~~ff~vt~~~vv~~~~a~a~~qgs~~G~a~~~-P~~ 148 (406)
T KOG1479|consen 102 LDLALVKTDTWTNGFFLVTLIIVVLLNLANAVVQGSLYGLAGLF-PSE 148 (406)
T ss_pred HHHHhhccCCccchhHHHHHHHHHHHhhhhhhhccchhhhhhcC-CHH
Confidence 2221 2466666777888888888777666655554 444
No 286
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=78.11 E-value=62 Score=37.73 Aligned_cols=105 Identities=14% Similarity=0.066 Sum_probs=66.0
Q ss_pred HHHHHhhhcchHHHHhHHHHHHHHHHHHHHHhh--hhhhhhh-------------HHHHHHHH----HHHHHHH--Hhhc
Q 005249 550 AMKLMDVAGRRKLLLTTIPVLIVSLIILVISET--LQLISPV-------------LKAGISTA----CVIIYFC--CFVA 608 (706)
Q Consensus 550 ~~~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~-------------~~~~~~~~----~~~~~~~--~~~~ 608 (706)
-.+++++++|.+++-+..........++++... .....+. ....+.+. ..++|.. .++.
T Consensus 79 y~kl~n~~s~~~lFy~~~~~F~~fF~~f~~vlyP~~~~lhp~~~~~~~~~~~~~~~~~~i~~~~~Wt~slfYv~aElwgs 158 (491)
T PF03219_consen 79 YSKLSNRLSREKLFYIIIIPFLGFFALFAFVLYPNRDILHPDAFADKLLAILPPGFKGFIAMFRNWTFSLFYVMAELWGS 158 (491)
T ss_pred HHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhhchhhcCCCHHHHHhhhhccchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 678999999999877665555555554444322 1111111 11111111 1112221 1221
Q ss_pred cccc-chhhhhcccCCcchhhhHHHHHHHHHHHHHHHHHhHHHHHHH
Q 005249 609 AYGP-IPNILCAEIFPTKVRGICIAICAMAYWICDIIVTYTLPVMLS 654 (706)
Q Consensus 609 ~~~~-~~~~~~~e~~p~~~r~~~~~~~~~~~~~~~~i~~~~~~~~~~ 654 (706)
...+ +.|.++.|+++.++-.+-.++.....+++.++++.+...+.+
T Consensus 159 vvlSlLFW~fAN~itt~~eAKRfYpl~g~ganigli~sG~~~~~~~~ 205 (491)
T PF03219_consen 159 VVLSLLFWGFANEITTVEEAKRFYPLFGLGANIGLIFSGQLTSYFSS 205 (491)
T ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1223 568899999999999999999999999999999999888877
No 287
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=77.33 E-value=27 Score=39.93 Aligned_cols=106 Identities=17% Similarity=0.121 Sum_probs=71.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhCCh--HHHH--HHHHHHHHHHHHHHhh---------hhHHHHHHHHHHHHHHHHhH
Q 005249 45 LVVAMSLIGATAITTCSGPISDWLGRR--PMLI--LSSVLYFVSGLVMLWS---------PNVYVLCIARLLDGFGVGLA 111 (706)
Q Consensus 45 Ll~S~~~Ig~~Igsl~~G~LaDR~GRR--rvLl--ig~iL~aIgsll~a~a---------~s~~lLli~R~L~GIg~G~~ 111 (706)
++..+++++=.+|..+..+.. .-++| ++++ ++=+++.-..++|..- ++-+..++..++.|+..|-.
T Consensus 311 i~~~~fNvgD~vGR~~~~~~~-~p~~~~~~l~i~s~~R~iFIPlf~lcn~~~~~~~p~~~~~d~~~~~~~~l~gltnGy~ 389 (437)
T TIGR00939 311 ICFLLFNLFDWLGRSLTSKFM-WPDEDSRWLPILSFLRVLFIPLFLLCNYPQRSRLPVFFPGDAYFIILMLLFGFSNGYL 389 (437)
T ss_pred HHHHHHHHHHHHHhhhhheeE-eeCCCccchHHHHHHHHHHHHHHHHhcCCccccCCeeecccHHHHHHHHHHHHhhhHH
Confidence 445556666666665443321 11223 3322 2233344444444432 45677778899999999999
Q ss_pred HHHHHHHHHhcCCcchhhHHhHHHHHHHHHHHHHHHHHHH
Q 005249 112 VTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVF 151 (706)
Q Consensus 112 ~~~~~a~IsE~fP~k~Rg~a~Gi~~ag~~LG~alg~ll~~ 151 (706)
......+..+..++++|..+..+...+..+|.++|.....
T Consensus 390 ~s~~m~~~p~~v~~~e~e~aG~~~~~~l~~Gl~~Gs~l~~ 429 (437)
T TIGR00939 390 GSLSMCLAPRQVDPHEREVAGALMVIFLLVGLALGAVLSF 429 (437)
T ss_pred HHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999998855543
No 288
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=75.86 E-value=6.4 Score=45.27 Aligned_cols=77 Identities=14% Similarity=-0.016 Sum_probs=57.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhCChHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhHHHHHHHHH
Q 005249 43 EGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVMLWSPNVYVLCIARLLDGFGVGLAVTLVPLYI 119 (706)
Q Consensus 43 igLl~S~~~Ig~~Igsl~~G~LaDR~GRRrvLlig~iL~aIgsll~a~a~s~~lLli~R~L~GIg~G~~~~~~~a~I 119 (706)
-.|-..++.+...+.+....++.+|+|-|+.+..+...++++..+.+..++.+....-+-..|+-.+....+.+..+
T Consensus 334 G~~GL~ins~~lgi~S~~~~~l~~~~g~r~~y~~~~~~f~~~~~~~gl~~~~~~~~~~~~~~G~~~~~~~~~p~~l~ 410 (498)
T KOG0637|consen 334 GCLGLMLNSIVLGIYSLLVEKLSRKFGTRKRYWGGVNAFGLATGLAGLVLNTYVVLSHRSTAGILSSPLLTVPYGAL 410 (498)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHhcCcceEEeehhHHHHHHHHHHhhhhhHHHHHHHHhhcceeecchhcccHHHH
Confidence 34556677788888999999999999988777777777888888888888888888888888865555444444433
No 289
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=75.33 E-value=54 Score=38.92 Aligned_cols=129 Identities=16% Similarity=0.182 Sum_probs=78.5
Q ss_pred HHHHHhhh-cchHHHHhHHHHHHHHHHHHHHHhhhhhhhhh--------------HHHHHHHHHHHHHHHHhhc-ccccc
Q 005249 550 AMKLMDVA-GRRKLLLTTIPVLIVSLIILVISETLQLISPV--------------LKAGISTACVIIYFCCFVA-AYGPI 613 (706)
Q Consensus 550 ~~~l~d~~-grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~-~~~~~ 613 (706)
+++++|-+ ||-+.+.++..+..+++.++..........|. ......+....++..+.+. +.-|-
T Consensus 93 g~~laD~f~gry~tI~~~s~i~~~G~~~lt~~a~~~~l~p~~~~~~~~~~~c~~~s~~q~~~~~~~l~lia~G~gg~r~~ 172 (571)
T KOG1237|consen 93 GAFLADSFLGRYFTINIGSLISLLGLFGLTLSAMIPALLPFMCKFKPGGNVCESPSKLQLAVLYGALYLIALGAGGIRPC 172 (571)
T ss_pred HHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCccccCCCCCCcccCcchHHHHHHHHHHHHheeccCCCCCc
Confidence 88999985 88888888888777777666665554422210 1111122222222222222 22244
Q ss_pred hhhhhcccCCcc----hhh--hHHHHHHHHHHHHHHHHHhHHHHHHHhhchhhHHHHHHHHHHHHHHHHHh
Q 005249 614 PNILCAEIFPTK----VRG--ICIAICAMAYWICDIIVTYTLPVMLSSIGLAGAFGVYAVVCFISWVFVFL 678 (706)
Q Consensus 614 ~~~~~~e~~p~~----~r~--~~~~~~~~~~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 678 (706)
...+-++-|+.. .+. .-+.......+++..+...+..++-+..||...|.+..++.++++++++.
T Consensus 173 ~~~fGadQfd~~~~~~~~~~~~fFnW~yf~~~~g~l~a~t~~vyiq~~~~w~lgf~i~~~~~~lai~iF~~ 243 (571)
T KOG1237|consen 173 LLAFGADQFDELDPVEVKGIPSFFNWFYFSQNGGALLAQTVLVYIQDNVGWKLGFGIPTVLNALAILIFLP 243 (571)
T ss_pred chhhcccccCccCcchhhCcccchhHHHHHHHHHHHHHHHHHHhhhhcccceeeccHHHHHHHHHHHHHHc
Confidence 446777888722 222 34445555666677777766666668889999999998888888777654
No 290
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=73.49 E-value=15 Score=41.72 Aligned_cols=132 Identities=14% Similarity=0.119 Sum_probs=61.4
Q ss_pred HHHHHh-----hhcchHHHHhHHH-HHHHHHHHHHHHhhhhhhh-hhHHHHHHHHHHHHHHHHhhccccc-chhhhhccc
Q 005249 550 AMKLMD-----VAGRRKLLLTTIP-VLIVSLIILVISETLQLIS-PVLKAGISTACVIIYFCCFVAAYGP-IPNILCAEI 621 (706)
Q Consensus 550 ~~~l~d-----~~grr~~~~~~~~-~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~e~ 621 (706)
-..++| |+||||.+++-.- ++...++.+..-.... ++ +......+.....++..-|.++..- ..-.+.-.+
T Consensus 83 WaPiVDs~y~k~~GrrksWvvp~q~llG~~mllLs~~v~~~-~g~ng~~p~v~~lt~~f~LLnflaAtQDIAVDgwALtm 161 (510)
T KOG3574|consen 83 WAPIVDSVYSKRFGRRKSWVVPCQYLLGLFMLLLSYLVDRG-LGGNGGLPNVVALTLLFLLLNFLAATQDIAVDGWALTM 161 (510)
T ss_pred HHhhhHHHHHHhhccccceeeehHHHHHHHHHHHhhCCCcc-cccCCCCcchHHHHHHHHHHHHHHhhhhhhhhHHHHHh
Confidence 566788 9999998876432 2222222222211111 11 1111111111122223333333221 122333455
Q ss_pred CCcchhhhHHHHHHHHHHHHHHHHHhHHHHHHHh----------------hchhhHHHHHHHHHHHHHHHHHhcccC
Q 005249 622 FPTKVRGICIAICAMAYWICDIIVTYTLPVMLSS----------------IGLAGAFGVYAVVCFISWVFVFLRVPE 682 (706)
Q Consensus 622 ~p~~~r~~~~~~~~~~~~~~~~i~~~~~~~~~~~----------------~g~~~~~~~~~~~~~~~~~~~~~~~~e 682 (706)
..++..|-+.......+.+|.+++..++-.+.+. +..++..++.+.+.++.-.++.+.-+|
T Consensus 162 Ls~e~lgyaST~q~Vg~~~GyfL~~~ifLaL~s~dF~N~y~rs~P~~~g~ItL~gy~~fwg~~~~vat~Lv~~~kke 238 (510)
T KOG3574|consen 162 LSRENLGYASTCQSVGQTAGYFLGNVVFLALESPDFCNTYLRSIPLDQGFITLAGYLWFWGALFIVATTLVALLKKE 238 (510)
T ss_pred cCHhhcCchhHHHHHHHhhhHHhhcceeeEecChhhhhHHHhcCcCccceEEhhHHHHHHHHHHHHHHHHHHHhcCC
Confidence 6666666665555556666666666555333220 124445666666666666665554443
No 291
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=72.15 E-value=49 Score=36.16 Aligned_cols=132 Identities=14% Similarity=0.055 Sum_probs=80.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhCCh--HHHHHHHHHHHHHHHHHHhh----h---hHHHHHHHHHHHHHHHHhHHH
Q 005249 43 EGLVVAMSLIGATAITTCSGPISDWLGRR--PMLILSSVLYFVSGLVMLWS----P---NVYVLCIARLLDGFGVGLAVT 113 (706)
Q Consensus 43 igLl~S~~~Ig~~Igsl~~G~LaDR~GRR--rvLlig~iL~aIgsll~a~a----~---s~~lLli~R~L~GIg~G~~~~ 113 (706)
-|.+.+.+.++.++|+-+..++..|-..| ..+.+..++.++...+.... + +...-+++.++.-.+.|..+|
T Consensus 284 hGfiFatFMlASmLGSSla~Rl~s~s~~~ve~ymqivf~vs~a~l~Lpilt~~vsP~kes~~~s~i~F~~~E~cvGlfwP 363 (454)
T KOG4332|consen 284 HGFIFATFMLASMLGSSLASRLLSRSSPKVESYMQIVFLVSIAALLLPILTSSVSPSKESPSESLIGFCLFEACVGLFWP 363 (454)
T ss_pred chhHHHHHHHHHHHhhHHHHHHHhcCCcccchHHHHHHHHHHHHHHHHHHHhccCCCcCCchHHHHHHHHHHHHHhhcch
Confidence 46778888888888888887777765544 34444444444444333332 1 233335666777788899999
Q ss_pred HHHHHHHhcCCcchhhHHhHHHHHHHHHHHHHHHHHHHHHHHhccchhhHHHHHHHHHHHHHH
Q 005249 114 LVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVFGMSLLASPSWRLMLGVLSIPALLYF 176 (706)
Q Consensus 114 ~~~a~IsE~fP~k~Rg~a~Gi~~ag~~LG~alg~ll~~~l~l~~~~GWR~~FlI~ail~LV~~ 176 (706)
....+=++..|.+.|+..+.++..-.++-.-++ +...-......+-|..|-+..+...+..
T Consensus 364 SimkmRsqyIPEearstimNfFRvPLnifvClv--Lynlh~~~~p~~tr~mf~icS~~~~~a~ 424 (454)
T KOG4332|consen 364 SIMKMRSQYIPEEARSTIMNFFRVPLNIFVCLV--LYNLHVDAFPTTTRNMFGICSAFLFVAS 424 (454)
T ss_pred HHHHHHHhhCCHHHHhhhhhheechhhHhhhhh--heecccccCccccchhhhhhHHHHHHHH
Confidence 999999999999999988887654443333222 1000001112355667766666555543
No 292
>PRK10263 DNA translocase FtsK; Provisional
Probab=64.10 E-value=52 Score=42.52 Aligned_cols=33 Identities=9% Similarity=-0.026 Sum_probs=16.3
Q ss_pred HHHHHHHhHHHHHHHhhchhhHHHHHHHHHHHH
Q 005249 640 ICDIIVTYTLPVMLSSIGLAGAFGVYAVVCFIS 672 (706)
Q Consensus 640 ~~~~i~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 672 (706)
.|++||..+...+...+|..++.+++.++.+++
T Consensus 142 gGGIIG~lLs~lL~~LfG~vGa~LILLlllLIG 174 (1355)
T PRK10263 142 SGGVIGSLLSTTLQPLLHSSGGTIALLCVWAAG 174 (1355)
T ss_pred ccchHHHHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 355555555555555555544444443333333
No 293
>KOG3880 consensus Predicted small molecule transporter involved in cellular pH homeostasis (Batten disease protein in human) [General function prediction only]
Probab=62.23 E-value=26 Score=38.78 Aligned_cols=109 Identities=14% Similarity=0.166 Sum_probs=75.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhhhhCChHH---HHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhHHHHHHH
Q 005249 41 TVEGLVVAMSLIGATAITTCSGPISDWLGRRPM---LILSSVLYFVSGLVMLWSPNVYVLCIARLLDGFGVGLAVTLVPL 117 (706)
Q Consensus 41 s~igLl~S~~~Ig~~Igsl~~G~LaDR~GRRrv---Llig~iL~aIgsll~a~a~s~~lLli~R~L~GIg~G~~~~~~~a 117 (706)
+|+-|....|.+|-.++.=-...+--+ .-+. +..-..++.+.-.+.-+.++++..++.-+.-|+-.|..++-..-
T Consensus 288 sqYRwyqvlYQlGVFiSRSS~~~~~~p--~l~~LailQ~vNl~ff~~~a~~~ftpsi~ivf~lI~~EGLlGGasYVNTf~ 365 (409)
T KOG3880|consen 288 SQYRWYQVLYQLGVFISRSSINLFTMP--YLWLLAILQFVNLLFFLLQAWYWFTPSIWIVFALILFEGLLGGASYVNTFH 365 (409)
T ss_pred hcchhhheeeeeeEEEEeccceEEech--HHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhcCchHHHHHHH
Confidence 457788888887765442211111001 1111 12223334444455556899999999999999999999998888
Q ss_pred HHHhcCCcchhhHHhHHHHHHHHHHHHHHHHHHH
Q 005249 118 YISETAPSEIRGRLNTLPQFTGSGGMFLAYCMVF 151 (706)
Q Consensus 118 ~IsE~fP~k~Rg~a~Gi~~ag~~LG~alg~ll~~ 151 (706)
-+.+-.++++|-.+++....+-.+|..++.++..
T Consensus 366 ~i~~e~~pd~rEfamsavs~sDS~Gi~lA~~lal 399 (409)
T KOG3880|consen 366 NIHKETEPDVREFAMSAVSISDSIGIFLAGLLAL 399 (409)
T ss_pred HHhhcCCchHHHHhHhhheecchhhHHHHHHHhc
Confidence 8888888999999999999999999998865543
No 294
>KOG3097 consensus Predicted membrane protein [Function unknown]
Probab=60.60 E-value=47 Score=37.09 Aligned_cols=74 Identities=15% Similarity=0.148 Sum_probs=56.7
Q ss_pred HHHHHHHHHHHHHHHhhhhCChHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCC
Q 005249 50 SLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVMLWSPNVYVLCIARLLDGFGVGLAVTLVPLYISETAP 124 (706)
Q Consensus 50 ~~Ig~~Igsl~~G~LaDR~GRRrvLlig~iL~aIgsll~a~a~s~~lLli~R~L~GIg~G~~~~~~~a~IsE~fP 124 (706)
..+..+..+++.+.+..++|-|++++++...+......- +=+.+..++..-.+.|++.+..+..--+|++++-.
T Consensus 67 ~y~~l~~s~m~~~~~Ir~~g~K~tm~lav~~Y~lyiA~N-l~pr~~tlVPa~~~~G~aa~p~W~SkgtYlT~~g~ 140 (390)
T KOG3097|consen 67 LYLSLIDSSMFMPLLIRFLGTKWTMVLAVFPYALYIAAN-LEPRYETLVPAGLVLGMAAGPIWASKGTYLTPMGQ 140 (390)
T ss_pred hhHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhh-cchhHHhhccHHHhhccccccccccCcceecHHHH
Confidence 345556667777799999999999998888776544332 34678888899999999999988877777776654
No 295
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=55.25 E-value=42 Score=40.96 Aligned_cols=75 Identities=8% Similarity=0.095 Sum_probs=50.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHH-HHHHHcCCChhHHHHHHHHHHH-HHHHHHHHHHHHhhhhC--ChHHHHHHHHHHH
Q 005249 8 AIAATIGNFLQGWDNATIAGAIV-YIKKDLNLGTTVEGLVVAMSLI-GATAITTCSGPISDWLG--RRPMLILSSVLYF 82 (706)
Q Consensus 8 liil~L~~fl~gl~~~iis~~lp-~I~q~fGLS~s~igLl~S~~~I-g~~Igsl~~G~LaDR~G--RRrvLlig~iL~a 82 (706)
.+...++..+..+....+..++| ++.+.||.+.+.+..+++...+ +.++|.+++|++..|+- .|.+..+.++...
T Consensus 394 f~~~~l~~~~~~~~~~G~~tFlPKyLE~Qfg~sas~An~l~G~i~vp~~~~Gi~lGG~iikkfkl~~r~~a~~~~~~~~ 472 (735)
T KOG3626|consen 394 FMLVVLASVIESLAITGYITFLPKYLETQFGISASLANILTGSIGVPAAAVGIFLGGLIIKKFKLSARGAAKFVIVCSV 472 (735)
T ss_pred HHHHHHHHHHHHHHHhhHHHhhHHHHHHHcCCCHHHHHHHhhhhhhhhhhhhhhccceeeeeecccHHHHHHHHHHHHH
Confidence 34445555555555555566666 4677899999999998866665 55678889999999875 4444444444433
No 296
>TIGR03173 pbuX xanthine permease. All the seed members of this model are observed adjacent to genes for either xanthine phosphoribosyltransferase (for the conversion of xanthine to guanine, GenProp0696, ) or genes for the conversion of xanthine to urate and its concomitant catabolism (GenProp0640, GenProp0688, GenProp0686 and GenProp0687). A number of sequences scoring higher than trusted to this model are found in different genomic contexts, and the possibility exist that these transport related compounds in addition to or instead of xanthine itself. The outgroup to this family are sequences which are characterized as uracil permeases or are adjacent to established uracil phosphoribosyltransferases.
Probab=51.36 E-value=4e+02 Score=29.95 Aligned_cols=97 Identities=13% Similarity=0.081 Sum_probs=61.2
Q ss_pred HHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhCChHHHHHHHHHHHHHHHHHHh-hhhHHHHHHHHHHHHHHHHh
Q 005249 32 IKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVMLW-SPNVYVLCIARLLDGFGVGL 110 (706)
Q Consensus 32 I~q~fGLS~s~igLl~S~~~Ig~~Igsl~~G~LaDR~GRRrvLlig~iL~aIgsll~a~-a~s~~lLli~R~L~GIg~G~ 110 (706)
+.+..|++..+...+.+...+...+++++-.+-.-++|.|..++.+.-...+....... ..++...+.+-++.|+-.-.
T Consensus 19 ~~~a~gl~~~~~~~~i~at~l~sgi~tllq~~~~~~~G~~~P~~~g~s~a~~~~~~~~~~~~~~~~~~ga~~v~Gii~il 98 (406)
T TIGR03173 19 VGGALGLSAEQTAYLISADLFACGIATLIQTLGIGPFGIRLPVVQGVSFAAVGPMIAIGAGGGLGAIFGAVIVAGLFVIL 98 (406)
T ss_pred HHhhcCCCHHHHHHHHHHHHHHHHHHHHHHhccccccCCccceeecCcHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHH
Confidence 34556999998888888888999998887653333678887776555443333332222 23455555556666665444
Q ss_pred HHHHHHHHHHhcCCcchhh
Q 005249 111 AVTLVPLYISETAPSEIRG 129 (706)
Q Consensus 111 ~~~~~~a~IsE~fP~k~Rg 129 (706)
.. .....+.+.+|+...|
T Consensus 99 lg-~~~~~l~~~iPp~v~G 116 (406)
T TIGR03173 99 LA-PFFSKLVRFFPPVVTG 116 (406)
T ss_pred HH-HHHHHHHHHCCcHHHH
Confidence 33 3556778888876544
No 297
>PF10225 DUF2215: Uncharacterized conserved protein (DUF2215); InterPro: IPR024233 This entry represents a domain that is found in a number of different proteins, including a family of transmembrane proteins.
Probab=51.26 E-value=2e+02 Score=30.52 Aligned_cols=61 Identities=11% Similarity=0.222 Sum_probs=28.4
Q ss_pred HHHHHHHhhhhHHHHHHHHHHHHHHHHhHHH--HHHHHHHhcCCcchhhHHhHHHHHHHHHHHHH
Q 005249 83 VSGLVMLWSPNVYVLCIARLLDGFGVGLAVT--LVPLYISETAPSEIRGRLNTLPQFTGSGGMFL 145 (706)
Q Consensus 83 Igsll~a~a~s~~lLli~R~L~GIg~G~~~~--~~~a~IsE~fP~k~Rg~a~Gi~~ag~~LG~al 145 (706)
+|.+++..++...--.++....|++.|.... ...-..+...| +|+....+...+..+|..+
T Consensus 19 ~Gi~Lf~~A~~LS~s~~FyY~sg~~lGv~~s~li~~~~~~k~lP--rk~~~~~~l~gg~~~~~y~ 81 (249)
T PF10225_consen 19 LGIVLFFLAPSLSRSVLFYYSSGISLGVLASLLILLFQLSKLLP--RKSMFYAVLYGGWSFGLYF 81 (249)
T ss_pred HHHHHHHHhHHhccChhHHHhhhHHHHHHHHHHHHHHHHHHHcc--CcchhHHHHhhhhHHHHHH
Confidence 3333344444333333334444444443322 23345678888 4455555544444555443
No 298
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=49.56 E-value=86 Score=35.43 Aligned_cols=96 Identities=19% Similarity=0.190 Sum_probs=73.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhCChH--HHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhHHHHHHHHHH
Q 005249 43 EGLVVAMSLIGATAITTCSGPISDWLGRRP--MLILSSVLYFVSGLVMLWSPNVYVLCIARLLDGFGVGLAVTLVPLYIS 120 (706)
Q Consensus 43 igLl~S~~~Ig~~Igsl~~G~LaDR~GRRr--vLlig~iL~aIgsll~a~a~s~~lLli~R~L~GIg~G~~~~~~~a~Is 120 (706)
-|..-.+..+..+++.+..|.+--++.|.. .+.++.+.-+...+++..+++.|..+++..+.+.......+++..-++
T Consensus 273 NG~veAv~tlLGa~~~~~~g~l~i~w~r~g~~ll~~~s~~~agllf~m~~t~~Iw~~Ya~yvlfr~~y~l~itiA~~~iA 352 (433)
T KOG3810|consen 273 NGAVEAVSTLLGAIAALAAGYLNINWNRWGDLLLAVGSAVQAGLLFIMAQTQHIWVCYAGYVLFRVIYQLTITIATFQIA 352 (433)
T ss_pred cCHHHHHHHHHHHHHHHHHHheeeccchhhHHHHHHHHHHhhhhhhhhhcccceehhhhhHHHHHhhHhhhhhHHHHHHH
Confidence 344556667778888999999988777764 344555555666667777889999999999998888888888888888
Q ss_pred hcCCcchhhHHhHHHHHH
Q 005249 121 ETAPSEIRGRLNTLPQFT 138 (706)
Q Consensus 121 E~fP~k~Rg~a~Gi~~ag 138 (706)
+-...+.-|...|+....
T Consensus 353 ~nL~~e~~gLvFGiNTFv 370 (433)
T KOG3810|consen 353 RNLSSELFGLVFGINTFV 370 (433)
T ss_pred HhhhhhhheeeeehHHHH
Confidence 888888888888876543
No 299
>KOG4812 consensus Golgi-associated protein/Nedd4 WW domain-binding protein [General function prediction only]
Probab=46.16 E-value=1.9e+02 Score=30.70 Aligned_cols=82 Identities=15% Similarity=0.056 Sum_probs=39.9
Q ss_pred CCcccccCCCCCCccchHHHHHHHhhchhhhhhhhhccCCCCCCcCCCCccccCCCchHHHHhhhhhhHHHHHHHHHHHH
Q 005249 449 RGSLVSVPGYDVPEEGEYIQAAALVSQPALYSKELMDQHPVGPAMVHPSETASKGPSWAALLEAGVKRALLVGVGIQILQ 528 (706)
Q Consensus 449 ~~~~~~~~~~~~~~~g~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 528 (706)
+...-++|..-.+.+.++.+|++-..... ...... .+... .......+-++-+.--.+++.+++.+.+
T Consensus 106 ~p~~tslp~~~~e~p~t~~~Aaa~~Ap~y--~~~i~~-~~~~~---------~nd~~~~D~L~vGnd~~F~~af~vAflF 173 (262)
T KOG4812|consen 106 KPVATSLPNNLDEAPPTYAEAAADMAPPY--YGTIDL-ENSDG---------RNDEIDIDGLRVGNDGIFMWAFIVAFLF 173 (262)
T ss_pred CCccccCccccCCCCcchhHhhhhhCCcc--ccceec-ccCCC---------ccchhcccccccccchHHHHHHHHHHHH
Confidence 44555667555567777777776443332 111100 00000 0112233334444555667777777777
Q ss_pred hhhhhhhhHhcHHH
Q 005249 529 QFSGINGVLYYTPQ 542 (706)
Q Consensus 529 ~~~g~~~~~~~~~~ 542 (706)
+|.|+.........
T Consensus 174 nwIGFlltycl~tT 187 (262)
T KOG4812|consen 174 NWIGFLLTYCLTTT 187 (262)
T ss_pred HHHHHHHHHHHHhh
Confidence 77775543333333
No 300
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=45.30 E-value=8.5 Score=41.46 Aligned_cols=105 Identities=20% Similarity=0.102 Sum_probs=3.7
Q ss_pred HHHHHHHHHHHHHHHHHHHhhh-hCChHHHHH--HHHHHHHHHHHHHh----------hhhHHHHHHHHHHHHHHHHhHH
Q 005249 46 VVAMSLIGATAITTCSGPISDW-LGRRPMLIL--SSVLYFVSGLVMLW----------SPNVYVLCIARLLDGFGVGLAV 112 (706)
Q Consensus 46 l~S~~~Ig~~Igsl~~G~LaDR-~GRRrvLli--g~iL~aIgsll~a~----------a~s~~lLli~R~L~GIg~G~~~ 112 (706)
+..+++++=.+|..+.++.-=+ -.+|+++.. .-+++.-..++|.. .++-+..++..++.|+..|-..
T Consensus 187 ~fl~Fn~gD~iGR~l~~~~~~~~~~~~~l~~~s~~R~~fiPlf~~cn~~p~~~~~~~~~~~d~~~~i~~~l~g~TNGyl~ 266 (309)
T PF01733_consen 187 LFLLFNLGDFIGRFLASWPRWPGPSPRWLWILSLLRFLFIPLFLLCNVQPRPRYLPVLFNSDAWFIILMLLFGFTNGYLS 266 (309)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHhcchhcceeEecccccccHHHHHHHHHHHHHHHHHHHhhcccccCCCcccchHHHHHHHHHHHHccchhh
Confidence 4556777777777766654211 124443332 22333333333322 2345677778999999999999
Q ss_pred HHHHHHHHhcCCcchhhHHhHHHHHHHHHHHHHHHHHH
Q 005249 113 TLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMV 150 (706)
Q Consensus 113 ~~~~a~IsE~fP~k~Rg~a~Gi~~ag~~LG~alg~ll~ 150 (706)
.....+..+..++++|..+..+...+..+|..+|..+.
T Consensus 267 tl~m~~~p~~v~~~e~e~aG~~~~~~L~~Gl~~Gs~ls 304 (309)
T PF01733_consen 267 TLAMMYAPKSVSPEERELAGSVMSFFLSFGLFIGSVLS 304 (309)
T ss_dssp HHHH----------------------------------
T ss_pred hceeeeCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999988888888888888874443
No 301
>TIGR00801 ncs2 uracil-xanthine permease. NCS2 family appears to be distantly related to the NCS1 family (TC #2.A.39).
Probab=44.75 E-value=5.1e+02 Score=29.32 Aligned_cols=120 Identities=13% Similarity=0.085 Sum_probs=67.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhCChHHHHHHHH-HHHHHHH
Q 005249 8 AIAATIGNFLQGWDNATIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSV-LYFVSGL 86 (706)
Q Consensus 8 liil~L~~fl~gl~~~iis~~lp~I~q~fGLS~s~igLl~S~~~Ig~~Igsl~~G~LaDR~GRRrvLlig~i-L~aIgsl 86 (706)
.+.+.+-+.+..+......|.+ +.... +++.+...+.+...+...+++++-+....+. -|-....+.- .+....+
T Consensus 7 ~~~lglQh~l~~~~~~i~~p~i--v~~~~-l~~~~~~~li~at~~~sgi~Tllq~~~~~~~-~~lp~~~G~sfa~i~~~~ 82 (415)
T TIGR00801 7 TLVLGLQHLLAMFGGTVLVPLL--VGLAP-LSAEQTQYLVSISLLTSGIGTLLQLFRTGGQ-IGLPSYLGSSFAFVSPMI 82 (415)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH--Hhccc-CCHHHHHHHHHHHHHHHHHHHHHHHhhhcCc-eeeeeeecCcHHHHHHHH
Confidence 3444555555555444443322 44556 8999999999999999999999888877654 2222222222 2222222
Q ss_pred HHHhhhhHHHHHHHHHHHHHHHHhHHHH----HHHHHHhcCCcchhhHH
Q 005249 87 VMLWSPNVYVLCIARLLDGFGVGLAVTL----VPLYISETAPSEIRGRL 131 (706)
Q Consensus 87 l~a~a~s~~lLli~R~L~GIg~G~~~~~----~~a~IsE~fP~k~Rg~a 131 (706)
......++.....+-++.|+........ ...++.+.+|+.-.+..
T Consensus 83 ~~~~~~~~~~~~g~~i~~gl~~~ll~~~~~~~~~~~i~~~~Pp~v~g~i 131 (415)
T TIGR00801 83 AIGSGLGIPAIMGALIATGLVYTLLSLLIKKLGPRWLMKLFPPVVTGPV 131 (415)
T ss_pred HHHhccCHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHhcCCchhHHHh
Confidence 2222234555555555666555444322 22456888998876653
No 302
>PF06912 DUF1275: Protein of unknown function (DUF1275); InterPro: IPR010699 This family consists of several hypothetical bacterial proteins of around 200 residues in length. The function of this family is unknown although a few members are thought to be membrane proteins.
Probab=43.92 E-value=3.5e+02 Score=27.22 Aligned_cols=39 Identities=13% Similarity=0.026 Sum_probs=19.8
Q ss_pred HHHHHHHHHHHHHHHHHHHh---hhhCChHHHHHHHHHHHHH
Q 005249 46 VVAMSLIGATAITTCSGPIS---DWLGRRPMLILSSVLYFVS 84 (706)
Q Consensus 46 l~S~~~Ig~~Igsl~~G~La---DR~GRRrvLlig~iL~aIg 84 (706)
......+++.+|.++++.+. ++..+|+......++-.+.
T Consensus 51 ~~~~~i~~F~~G~~~~~~i~~~~~~~~~~~~~~~~l~~~~~l 92 (209)
T PF06912_consen 51 RYLLAILSFILGAFLAGLIVRRSRRRRRRRWYRILLLLEAIL 92 (209)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHH
Confidence 33444556667777777772 2344444444444333333
No 303
>PF11947 DUF3464: Protein of unknown function (DUF3464); InterPro: IPR021855 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 137 to 196 amino acids in length.
Probab=42.62 E-value=65 Score=31.87 Aligned_cols=89 Identities=10% Similarity=0.055 Sum_probs=46.3
Q ss_pred HHHHhhhcchHHHHhHHHHHHHHHHHHHHHhhhhhhh-hhHHHHHHHHHHHHHHHHhhcccccchhhhhcccCCcchhhh
Q 005249 551 MKLMDVAGRRKLLLTTIPVLIVSLIILVISETLQLIS-PVLKAGISTACVIIYFCCFVAAYGPIPNILCAEIFPTKVRGI 629 (706)
Q Consensus 551 ~~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~ 629 (706)
-.++||+-||.++..+++... ++..+++++..-... -....|+. ++.-+.+|+++...+.|....--..++..|.
T Consensus 55 ~~Vs~RM~rRm~~~~GiP~~l-G~~~f~~~y~l~~~~~~dvP~~~~---~~~S~~~Fg~gllGisYGilSaSWD~~r~GS 130 (153)
T PF11947_consen 55 EVVSNRMLRRMAVFVGIPTAL-GVAVFVVFYYLKSRQIVDVPPWAV---LLVSLVFFGLGLLGISYGILSASWDPEREGS 130 (153)
T ss_pred HHHHHHHHHHHHHHhchHHHH-HHHHHHHHHHHHhccccccCchHH---HHHHHHHHHHHHHhhhhhhcccccCCCCCCC
Confidence 467888888887777755443 333333333222111 11112222 2223334444444555555555556666788
Q ss_pred HHHHHHHHHHHHHH
Q 005249 630 CIAICAMAYWICDI 643 (706)
Q Consensus 630 ~~~~~~~~~~~~~~ 643 (706)
..|+-.+-.+++-+
T Consensus 131 llG~~e~~~N~~r~ 144 (153)
T PF11947_consen 131 LLGWEEFKRNWGRM 144 (153)
T ss_pred cccHHHHHHhHHHH
Confidence 88887776666544
No 304
>PF08507 COPI_assoc: COPI associated protein; InterPro: IPR013714 Proteins in this family co-localise with COPI vesicle coat proteins []. In yeast it is a Golgi membrane protein involved in vesicular trafficking, interacting with TVP18 [].
Probab=42.51 E-value=3.1e+02 Score=26.10 Aligned_cols=9 Identities=22% Similarity=-0.112 Sum_probs=4.8
Q ss_pred hhcccCCcc
Q 005249 617 LCAEIFPTK 625 (706)
Q Consensus 617 ~~~e~~p~~ 625 (706)
.+.|.-+..
T Consensus 48 ~~~E~~~~~ 56 (136)
T PF08507_consen 48 ILAEFRWPF 56 (136)
T ss_pred HHHHhccHH
Confidence 455765444
No 305
>PF12805 FUSC-like: FUSC-like inner membrane protein yccS
Probab=42.18 E-value=2.7e+02 Score=29.75 Aligned_cols=38 Identities=18% Similarity=0.234 Sum_probs=21.2
Q ss_pred HHHHHHHHHHHHHHHh-hhhHHHHHHHHHHHHHHHHhHH
Q 005249 75 ILSSVLYFVSGLVMLW-SPNVYVLCIARLLDGFGVGLAV 112 (706)
Q Consensus 75 lig~iL~aIgsll~a~-a~s~~lLli~R~L~GIg~G~~~ 112 (706)
+++.+++++++++..+ .++.|.+.+.-++.+++.++..
T Consensus 3 ~~~~~~~~~~s~~~~l~~~~~~l~~~~~~~~~F~~~ml~ 41 (284)
T PF12805_consen 3 IATLLCFALASLLVGLLFPYPWLLILVLALLTFFFGMLG 41 (284)
T ss_pred HHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHH
Confidence 3444555455544444 4555666666666776666553
No 306
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=39.46 E-value=95 Score=29.11 Aligned_cols=37 Identities=16% Similarity=0.249 Sum_probs=23.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhh-CChHHHHHHHHHH
Q 005249 45 LVVAMSLIGATAITTCSGPISDWL-GRRPMLILSSVLY 81 (706)
Q Consensus 45 Ll~S~~~Ig~~Igsl~~G~LaDR~-GRRrvLlig~iL~ 81 (706)
+-.+.=+++.++.....||+.||| |.+++.++..++.
T Consensus 46 ~klssefIsGilVGa~iG~llD~~agTsPwglIv~lll 83 (116)
T COG5336 46 FKLSSEFISGILVGAGIGWLLDKFAGTSPWGLIVFLLL 83 (116)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHH
Confidence 334455566666666788899986 6666655544443
No 307
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=38.63 E-value=1.6e+02 Score=33.56 Aligned_cols=106 Identities=14% Similarity=0.041 Sum_probs=69.5
Q ss_pred HHHHHH-HHHHHHHHHHHHHHHhhhhCChHHHHHHH-HHHHHHHHHHH------hhhhHHHHHHHHHHHHHHHHhHHHHH
Q 005249 44 GLVVAM-SLIGATAITTCSGPISDWLGRRPMLILSS-VLYFVSGLVML------WSPNVYVLCIARLLDGFGVGLAVTLV 115 (706)
Q Consensus 44 gLl~S~-~~Ig~~Igsl~~G~LaDR~GRRrvLlig~-iL~aIgsll~a------~a~s~~lLli~R~L~GIg~G~~~~~~ 115 (706)
-++..+ +++.-.+|.+.+.++-+.=.|+....... ++..-...+|- +-.+-+++++...++|+..|=...+.
T Consensus 285 ~~~~~l~fN~~d~vG~~~a~~~~~~~~r~l~i~v~lR~lfiPlF~~cn~~~~~v~~~~~~~~~~l~~~lglsnGYltsl~ 364 (406)
T KOG1479|consen 285 LLLVFLSFNVFDLIGSILAALLTWPDPRKLTIPVLLRLLFIPLFLLCNYPPLPVVFESDGWFIFLMSLLGLSNGYLTSLI 364 (406)
T ss_pred HHHHHHHhHHHHHhhhhhhhcccCCCCceehHHHHHHHHHHHHHHHhccCCCCceecCchHHHHHHHHHHhccchHhhhe
Confidence 344555 77777788665555544432332222211 22222222222 13466788888999999999888888
Q ss_pred HHHHHhcCCcchhhHHhHHHHHHHHHHHHHHHHH
Q 005249 116 PLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCM 149 (706)
Q Consensus 116 ~a~IsE~fP~k~Rg~a~Gi~~ag~~LG~alg~ll 149 (706)
..+..+..|++++..+..+...+...|.+.|...
T Consensus 365 m~~aPk~v~~~e~e~aG~~m~~fl~~Gl~~G~~~ 398 (406)
T KOG1479|consen 365 MMYAPKQVKPSEKEAAGNLMVFFLVGGLALGSLL 398 (406)
T ss_pred ehhcCCCCChHHHHHHHHHHHHHHHHHHHHhhHH
Confidence 8899999999999888888888888888887433
No 308
>PF05297 Herpes_LMP1: Herpesvirus latent membrane protein 1 (LMP1); InterPro: IPR007961 This family consists of several latent membrane protein 1 or LMP1s mostly from Epstein-Barr virus (strain GD1) (HHV-4) (Human herpesvirus 4). LMP1 of HHV-4 is a 62-65 kDa plasma membrane protein possessing six membrane spanning regions, a short cytoplasmic N terminus and a long cytoplasmic carboxy tail of 200 amino acids. HHV-4 virus latent membrane protein 1 (LMP1) is essential for HHV-4 mediated transformation and has been associated with several cases of malignancies. HHV-4-like viruses in Macaca fascicularis (Cynomolgus monkeys) have been associated with high lymphoma rates in immunosuppressed monkeys [].; GO: 0019087 transformation of host cell by virus, 0016021 integral to membrane; PDB: 1CZY_E 1ZMS_B.
Probab=37.99 E-value=11 Score=40.66 Aligned_cols=28 Identities=21% Similarity=0.318 Sum_probs=0.0
Q ss_pred HHHHHhhhcchHHHHhHHHHHHHHHHHH
Q 005249 550 AMKLMDVAGRRKLLLTTIPVLIVSLIIL 577 (706)
Q Consensus 550 ~~~l~d~~grr~~~~~~~~~~~~~~~~~ 577 (706)
...++-.|.||-++-.+..+.+..++.+
T Consensus 65 IIiIImlF~RrLLCPLGlLCiilimi~l 92 (381)
T PF05297_consen 65 IIIIIMLFKRRLLCPLGLLCIILIMIVL 92 (381)
T ss_dssp ----------------------------
T ss_pred HHHHHHHHHHhhcCcchHHHHHHHHHHH
Confidence 3455566788877666654444443333
No 309
>PF12805 FUSC-like: FUSC-like inner membrane protein yccS
Probab=37.76 E-value=2.3e+02 Score=30.20 Aligned_cols=18 Identities=11% Similarity=0.218 Sum_probs=7.4
Q ss_pred hhhHHHHHHHHHHHHHHH
Q 005249 627 RGICIAICAMAYWICDII 644 (706)
Q Consensus 627 r~~~~~~~~~~~~~~~~i 644 (706)
|+..+|+...+..+-.+.
T Consensus 46 r~~~i~~~~Ll~~v~t~~ 63 (284)
T PF12805_consen 46 RAATIGFATLLVAVYTMA 63 (284)
T ss_pred HHHHHHHHHHHHHHHHHh
Confidence 344444444443333333
No 310
>COG3619 Predicted membrane protein [Function unknown]
Probab=37.42 E-value=5.2e+02 Score=27.24 Aligned_cols=101 Identities=16% Similarity=0.263 Sum_probs=48.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH--------HHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhCC-hH-HH
Q 005249 5 ALVAIAATIGNFLQGWDNATIAGAI--------VYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGR-RP-ML 74 (706)
Q Consensus 5 ~liliil~L~~fl~gl~~~iis~~l--------p~I~q~fGLS~s~igLl~S~~~Ig~~Igsl~~G~LaDR~GR-Rr-vL 74 (706)
++.+.++..+-+++.++....+... ..+.-++.-.+........+..+..+++.+....+..|..| .. .+
T Consensus 11 ~l~~lLa~~aGfvDa~~f~~~gg~F~s~~TGN~v~~gi~l~~~~~~~a~~~~~pii~Fv~Gv~~~~~~~r~~~~~~~~~l 90 (226)
T COG3619 11 RLGLLLALVAGFVDAFGFLHLGGVFVSFMTGNLVLLGIELAEGDAALAVLLLLPILAFVLGVAAAELISRRATRSFIPVL 90 (226)
T ss_pred HHHHHHHHHhhhHHHHHHHHhcCchhhheeccHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchHHH
Confidence 3444555556666655553222211 11222333334555566677777778886666666666654 22 22
Q ss_pred H-HHHHHHHHHHHHHHhh----hhHHHHHHHHHHHH
Q 005249 75 I-LSSVLYFVSGLVMLWS----PNVYVLCIARLLDG 105 (706)
Q Consensus 75 l-ig~iL~aIgsll~a~a----~s~~lLli~R~L~G 105 (706)
. ...++..+..+..++. ++....+..-+.+|
T Consensus 91 ~~~~~ll~~~v~~~~~~~p~~~~~~~~~il~~f~mg 126 (226)
T COG3619 91 LLVSLLLALIALLALGFIPESSPDFVAVILVAFAMG 126 (226)
T ss_pred HHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHH
Confidence 2 3333333333444442 34444444445554
No 311
>COG2233 UraA Xanthine/uracil permeases [Nucleotide transport and metabolism]
Probab=34.58 E-value=6e+02 Score=29.54 Aligned_cols=124 Identities=13% Similarity=0.108 Sum_probs=81.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhCChHHHHHHHHHHHHHHH
Q 005249 7 VAIAATIGNFLQGWDNATIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGL 86 (706)
Q Consensus 7 iliil~L~~fl~gl~~~iis~~lp~I~q~fGLS~s~igLl~S~~~Ig~~Igsl~~G~LaDR~GRRrvLlig~iL~aIgsl 86 (706)
-.+.+.+-+++..+...+..|. .+.++++++..+...+.+.-.+.+.++.++--....++|-|-....+.-...++-+
T Consensus 17 ~~~~lglQH~lamfg~~V~VPl--ivg~a~~l~~~~~~~Lis~~l~~~GiaTllq~~~~~~~g~~lP~~lG~sFafi~p~ 94 (451)
T COG2233 17 KLLLLGLQHLLAMFGATVLVPL--LVGLALGLSAEDTAYLISADLLASGIGTLLQLLGTGPGGSGLPSYLGSSFAFVAPM 94 (451)
T ss_pred HHHHHHHHHHHHHHhcchHhhH--HhccCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhccCcccCCCeeEechHHHHHHH
Confidence 3455666667776666665543 36778999999999999999999999998776644446656555555444444444
Q ss_pred HHHhh---hhHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCcchhhHHh
Q 005249 87 VMLWS---PNVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLN 132 (706)
Q Consensus 87 l~a~a---~s~~lLli~R~L~GIg~G~~~~~~~a~IsE~fP~k~Rg~a~ 132 (706)
+.... ......+.+-+..|+..-..-+....++...+||-.-|...
T Consensus 95 i~~~~~~g~~~~~~~G~ii~ag~~~~li~~~~~~~l~rlfPPvVtG~Vi 143 (451)
T COG2233 95 IAIGGTTGDGIAALLGGIIAAGLVYFLISPIVKIRLARLFPPVVTGPVV 143 (451)
T ss_pred HHHHhccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCceEEeEe
Confidence 43332 23556666666666655554333322888999988766543
No 312
>COG1230 CzcD Co/Zn/Cd efflux system component [Inorganic ion transport and metabolism]
Probab=34.09 E-value=6.6e+02 Score=27.53 Aligned_cols=82 Identities=16% Similarity=0.213 Sum_probs=47.3
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhhh---hCChHHHHHHH
Q 005249 2 NGAALVAIAATIGNFLQGWDNATIAGAIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISDW---LGRRPMLILSS 78 (706)
Q Consensus 2 ~r~~liliil~L~~fl~gl~~~iis~~lp~I~q~fGLS~s~igLl~S~~~Ig~~Igsl~~G~LaDR---~GRRrvLlig~ 78 (706)
+|+.+..+.+.+++++.-+..+.+...+..+....++-....+++.++..+ .++..-.++ ||.||.=+++.
T Consensus 21 ~r~l~~~~~L~~~f~~iE~i~g~~s~SlaLLADa~Hml~D~~al~lal~A~------~~a~r~~~~~~TfGy~R~eiLaa 94 (296)
T COG1230 21 ERRLLIALLLNLAFMLIEIIGGLLTGSLALLADALHMLSDALALLLALIAI------KLARRPATKRFTFGYKRLEILAA 94 (296)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHhHHHHHHHHHHHHHHHHHH------HHhcCCCCCCCCccHhHHHHHHH
Confidence 455666666677777666666666666666777777766666555554322 122222333 77777666666
Q ss_pred HHHHHHHHHHH
Q 005249 79 VLYFVSGLVML 89 (706)
Q Consensus 79 iL~aIgsll~a 89 (706)
++.++..+..+
T Consensus 95 ~~nav~Li~~s 105 (296)
T COG1230 95 FLNALLLIVVS 105 (296)
T ss_pred HHHHHHHHHHH
Confidence 55555444433
No 313
>PF05313 Pox_P21: Poxvirus P21 membrane protein; InterPro: IPR007977 The p21 membrane protein of vaccinia virus, encoded by the A17L (or A18L) gene, has been reported to localise on the inner of the two membranes of the intracellular mature virus (IMV). It has also been shown that p21 acts as a membrane anchor for the externally located fusion protein P14 (A27L gene) [].; GO: 0016021 integral to membrane
Probab=33.89 E-value=2.8e+02 Score=28.33 Aligned_cols=50 Identities=20% Similarity=0.296 Sum_probs=27.8
Q ss_pred CCcchhhhHHHHHHHHHHHHHHHHHhHHHHHHHhhchhhHHHHHHHHHHHHHHHHHh
Q 005249 622 FPTKVRGICIAICAMAYWICDIIVTYTLPVMLSSIGLAGAFGVYAVVCFISWVFVFL 678 (706)
Q Consensus 622 ~p~~~r~~~~~~~~~~~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 678 (706)
-|.+.+.+++++..++..+..++..-+ .+++++..+.-++.++.+.+..+
T Consensus 110 ~~~~~~~~gMsIvcv~~Si~ti~~~~~-------s~s~~~~ti~yIiL~iLf~~Ya~ 159 (189)
T PF05313_consen 110 NPGANNNVGMSIVCVIMSIITIIVNSV-------SGSSGAYTISYIILAILFCIYAF 159 (189)
T ss_pred cCCCcceehhHHHHHHHHHHHHHHHhh-------hHhHHHHHHHHHHHHHHHHHhee
Confidence 466667778888776666555444433 25555555555544444443333
No 314
>PRK12438 hypothetical protein; Provisional
Probab=32.20 E-value=7e+02 Score=31.89 Aligned_cols=18 Identities=11% Similarity=0.014 Sum_probs=11.6
Q ss_pred chhhHHHHHHHHHHHHHH
Q 005249 159 PSWRLMLGVLSIPALLYF 176 (706)
Q Consensus 159 ~GWR~~FlI~ail~LV~~ 176 (706)
.+||...+..+++.+..+
T Consensus 281 r~~rlp~i~~~llv~~~i 298 (991)
T PRK12438 281 RDLRIPAMAAALLVLSAI 298 (991)
T ss_pred hcchhHHHHHHHHHHHHH
Confidence 478888776666644433
No 315
>PF11947 DUF3464: Protein of unknown function (DUF3464); InterPro: IPR021855 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 137 to 196 amino acids in length.
Probab=32.07 E-value=1.6e+02 Score=29.17 Aligned_cols=52 Identities=21% Similarity=0.220 Sum_probs=35.8
Q ss_pred hhHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCcchhhHHhHHHHHHHHHHHHHH
Q 005249 92 PNVYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLA 146 (706)
Q Consensus 92 ~s~~lLli~R~L~GIg~G~~~~~~~a~IsE~fP~k~Rg~a~Gi~~ag~~LG~alg 146 (706)
+.+..+++..++.|+|.- .+.|.+++--+++++.|..+|+-.+-.+++-+.-
T Consensus 95 P~~~~~~~S~~~Fg~gll---GisYGilSaSWD~~r~GSllG~~e~~~N~~r~~~ 146 (153)
T PF11947_consen 95 PPWAVLLVSLVFFGLGLL---GISYGILSASWDPEREGSLLGWEEFKRNWGRMWE 146 (153)
T ss_pred CchHHHHHHHHHHHHHHH---hhhhhhcccccCCCCCCCcccHHHHHHhHHHHHH
Confidence 456666666666666543 3455666667777778999999888888776654
No 316
>TIGR01666 YCCS hypothetical membrane protein, TIGR01666. This model represents a clade of sequences from gamma and beta proteobacteria. These proteins are 700 amino acids long and many have been annotated as putative membrane proteins. The gene from Salmonella has been annotated as a putative efflux transporter. The gene from E. coli has the name yccS.
Probab=31.31 E-value=6.7e+02 Score=30.78 Aligned_cols=52 Identities=12% Similarity=0.258 Sum_probs=33.6
Q ss_pred HHHHhhh----hCChHHHHHHHHHHHHHHHHHHhh-hhHHHHHHHHHHHHHHHHhHH
Q 005249 61 SGPISDW----LGRRPMLILSSVLYFVSGLVMLWS-PNVYVLCIARLLDGFGVGLAV 112 (706)
Q Consensus 61 ~G~LaDR----~GRRrvLlig~iL~aIgsll~a~a-~s~~lLli~R~L~GIg~G~~~ 112 (706)
++-++|. -||.+-++++.+++.++++...+. +..|.+..+-++.+++.++..
T Consensus 43 a~al~D~d~~~~~R~~~l~~t~~~f~i~sl~v~ll~~~p~lf~~~l~~~tf~~~mlg 99 (704)
T TIGR01666 43 AAALVDLDDRLTGRLKNVIFTLICFSIASFSVELLFGKPWLFAVGLTVSTFGFIMLG 99 (704)
T ss_pred hhccCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHH
Confidence 4556664 356667777888888777776654 455666666666666665553
No 317
>PRK10263 DNA translocase FtsK; Provisional
Probab=30.33 E-value=4.9e+02 Score=34.19 Aligned_cols=20 Identities=10% Similarity=0.021 Sum_probs=10.2
Q ss_pred HHHHHHHHHHHHHHHhhhhC
Q 005249 50 SLIGATAITTCSGPISDWLG 69 (706)
Q Consensus 50 ~~Ig~~Igsl~~G~LaDR~G 69 (706)
.+++..+|..++..+..-||
T Consensus 61 ~Nl~GiVGA~LAD~L~~LFG 80 (1355)
T PRK10263 61 HNLGGMPGAWLADTLFFIFG 80 (1355)
T ss_pred ccccchHHHHHHHHHHHHHh
Confidence 34445555555555555555
No 318
>PF07760 DUF1616: Protein of unknown function (DUF1616); InterPro: IPR011674 This is a group of sequences from hypothetical archaeal proteins. The region in question is approximately 330 amino acid residues long.
Probab=30.24 E-value=5.6e+02 Score=27.53 Aligned_cols=51 Identities=18% Similarity=0.157 Sum_probs=30.3
Q ss_pred HHHHHHHHHHHHHhHHHHHHHHHHhcCCcchhhHHhHHHHHHHHHHHHHHHHHH
Q 005249 97 LCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMV 150 (706)
Q Consensus 97 Lli~R~L~GIg~G~~~~~~~a~IsE~fP~k~Rg~a~Gi~~ag~~LG~alg~ll~ 150 (706)
.-..|.+.|+-.=.. .+.++++.-.||++++ ..++-....++|..++..+.
T Consensus 22 ~~~lr~~~g~~~vlf-~PGy~l~~~lfp~~~~--l~~~er~~ls~glSi~~~~~ 72 (287)
T PF07760_consen 22 IPPLRVILGFPFVLF-LPGYALVAALFPRKHD--LDGIERLALSVGLSIAIVPL 72 (287)
T ss_pred hhHHHHHHHHHHHHH-hccHHHHHHHccCcCC--CcHHHHHHHHHHHHHHHHHH
Confidence 456788888766444 6678889999995433 23344444444444443333
No 319
>TIGR01667 YCCS_YHJK integral membrane protein, YccS/YhfK family. TMHMM on members of this model shows a consensus of 11 transmembrane helices separated into two clusters, an N-terminal cluster of 6 and a central cluster of 5. This would indicate two non-membrane domains one on each side of the membrane
Probab=29.52 E-value=8.5e+02 Score=29.86 Aligned_cols=54 Identities=19% Similarity=0.249 Sum_probs=35.4
Q ss_pred HHHHHhhhh----CChHHHHHHHHHHHHHHHHHHhh-hhHHHHHHHHHHHHHHHHhHHH
Q 005249 60 CSGPISDWL----GRRPMLILSSVLYFVSGLVMLWS-PNVYVLCIARLLDGFGVGLAVT 113 (706)
Q Consensus 60 ~~G~LaDR~----GRRrvLlig~iL~aIgsll~a~a-~s~~lLli~R~L~GIg~G~~~~ 113 (706)
+++-+.|.= ||.+-++++.+++.++++...+. +..+.+.++-++.+++.++...
T Consensus 42 ia~~l~D~~~~~~~R~~~l~it~~~f~i~sl~v~ll~~~p~~~~~~l~~~tf~~~mlga 100 (701)
T TIGR01667 42 IAAGLDDLDDRLTGRLKNLIITLSCFSIASFLVQLLFPKPWLFPFLLTLLTFGFILLGA 100 (701)
T ss_pred HhhccCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHH
Confidence 345566643 45677888888888888777765 4555666666667776665543
No 320
>COG2274 SunT ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain [Defense mechanisms]
Probab=29.07 E-value=1.2e+03 Score=28.80 Aligned_cols=72 Identities=13% Similarity=0.109 Sum_probs=32.8
Q ss_pred ccCCcchhhhHHHHHHHHHHHHHHHHHhHHHHH------------HHhhchhhHHHHHHHHHHHHHHHHHhcccCCCCCC
Q 005249 620 EIFPTKVRGICIAICAMAYWICDIIVTYTLPVM------------LSSIGLAGAFGVYAVVCFISWVFVFLRVPETKGMP 687 (706)
Q Consensus 620 e~~p~~~r~~~~~~~~~~~~~~~~i~~~~~~~~------------~~~~g~~~~~~~~~~~~~~~~~~~~~~~~et~~~~ 687 (706)
..|+.+.-|..++=.+-...|=.++...+...+ +-.++|..++.+++.+.+ ..++.+++.|-++.+.
T Consensus 243 ~~f~~r~~Ge~~sR~~el~~Ir~flt~~~l~~iiD~~~~~i~l~vm~~ys~~L~li~l~~~~l-~~l~~~~~~~~l~~~~ 321 (709)
T COG2274 243 SYFEKRSVGEIISRVRELEQIREFLTGSILTLIIDLLFALIFLAVMFLYSWKLTLIVLAAIPL-NVLITLIFQPLLRRKT 321 (709)
T ss_pred HHccCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHH
Confidence 335555555555555544444444444443333 334455544443333333 3333334455555555
Q ss_pred hHHHH
Q 005249 688 LEVIT 692 (706)
Q Consensus 688 ~~~~~ 692 (706)
.+.++
T Consensus 322 ~~~~~ 326 (709)
T COG2274 322 RKLIE 326 (709)
T ss_pred HHHHH
Confidence 44443
No 321
>KOG3817 consensus Uncharacterized conserved protein [Function unknown]
Probab=28.44 E-value=3e+02 Score=31.04 Aligned_cols=105 Identities=23% Similarity=0.214 Sum_probs=49.9
Q ss_pred HHHHHHHHHHhhhhhhhhHhcHHHH----HHhhhhHHHHHhhhcchHHHHhHHHHHHHHHHHHHHHhhhhhhhhhHHHHH
Q 005249 519 LVGVGIQILQQFSGINGVLYYTPQI----LEQAGVAMKLMDVAGRRKLLLTTIPVLIVSLIILVISETLQLISPVLKAGI 594 (706)
Q Consensus 519 ~~~~~~~~~~~~~g~~~~~~~~~~~----~~~~g~~~~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 594 (706)
+.++++.+...-..-+.++||+.-+ +..+-+..++.-|+-.|+.+..++.+-+=+..+..+-.... +.-.
T Consensus 144 v~gi~Lff~ar~Lsrn~vFYYssG~v~GilaSLl~Viflv~rf~PKkt~~~~iliGgWs~slY~i~ql~~------nLq~ 217 (452)
T KOG3817|consen 144 VVGILLFFSARRLSRNSVFYYSSGIVIGILASLLVVIFLVARFFPKKTMMYGILIGGWSISLYVIKQLAD------NLQL 217 (452)
T ss_pred HHHHHHHHHHHHhccCceEEEecccHHHHHHHHHHHHHHHHHhcccccceEEEEEccchhHHHHHHHHHH------HHHH
Confidence 3444444444444456677776543 23333367888888777766554332222222222111111 1112
Q ss_pred HHHHHHHHHHHhhcccccchhhhhcccCCcc-hhhh
Q 005249 595 STACVIIYFCCFVAAYGPIPNILCAEIFPTK-VRGI 629 (706)
Q Consensus 595 ~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~-~r~~ 629 (706)
+..+.=.|..+|.+..+-+..+.|-..=|++ .|+.
T Consensus 218 Iwieyr~yvLgYvlivgliSfaVCYK~GPp~d~RS~ 253 (452)
T KOG3817|consen 218 IWIEYRDYVLGYVLIVGLISFAVCYKIGPPKDPRSQ 253 (452)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhccCCCCCcchh
Confidence 3334445555555555555555666665554 4443
No 322
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=27.46 E-value=5.8e+02 Score=27.58 Aligned_cols=79 Identities=16% Similarity=0.152 Sum_probs=42.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhh-hCChHHHH----HHHHHHHHHHHHHHh-h----hhHHHHHHHHHHHHHHHHhHHH
Q 005249 44 GLVVAMSLIGATAITTCSGPISDW-LGRRPMLI----LSSVLYFVSGLVMLW-S----PNVYVLCIARLLDGFGVGLAVT 113 (706)
Q Consensus 44 gLl~S~~~Ig~~Igsl~~G~LaDR-~GRRrvLl----ig~iL~aIgsll~a~-a----~s~~lLli~R~L~GIg~G~~~~ 113 (706)
....-++..|+.+|.+..|..... +-||+.+. ++++++.+..++... . .++..+++.-|+.|+..=+..+
T Consensus 144 ~~~~I~fv~g~~~G~~~ig~~nkt~~kRk~fi~~~~~~gi~~~~l~~~~~~~~g~~~~~~~~~f~I~~Fl~G~f~WgiQ~ 223 (267)
T PF07672_consen 144 PIFQILFVAGYFLGPFTIGLWNKTNYKRKPFIHFIISLGIVFFVLSIVVVYFVGPGNAAGFAFFYIFGFLAGFFLWGIQG 223 (267)
T ss_pred HHHHHHHHHHHhhhceeeccchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHhhhH
Confidence 344455555666666666766653 44555443 334444444444211 1 2466677778888876655555
Q ss_pred HHHHHHHhc
Q 005249 114 LVPLYISET 122 (706)
Q Consensus 114 ~~~a~IsE~ 122 (706)
+....--|.
T Consensus 224 ViL~lPhEy 232 (267)
T PF07672_consen 224 VILNLPHEY 232 (267)
T ss_pred HHhcChhhh
Confidence 544443443
No 323
>PTZ00265 multidrug resistance protein (mdr1); Provisional
Probab=26.56 E-value=1.5e+03 Score=30.34 Aligned_cols=16 Identities=25% Similarity=0.316 Sum_probs=10.2
Q ss_pred chhhHHHHHHHHHHHH
Q 005249 159 PSWRLMLGVLSIPALL 174 (706)
Q Consensus 159 ~GWR~~FlI~ail~LV 174 (706)
.+|+..+++..++.++
T Consensus 195 ~sw~Lalv~l~~~pl~ 210 (1466)
T PTZ00265 195 KNARLTLCITCVFPLI 210 (1466)
T ss_pred HhHHHHHHHHHHHHHH
Confidence 3888877665554443
No 324
>KOG4255 consensus Uncharacterized conserved protein [Function unknown]
Probab=25.97 E-value=1e+03 Score=27.05 Aligned_cols=101 Identities=9% Similarity=0.085 Sum_probs=54.0
Q ss_pred HHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhh----hhCChHHHHHHHHHHHHHHHHHHh----------hhh
Q 005249 28 AIVYIKKDLNLGTTVEGLVVAMSLIGATAITTCSGPISD----WLGRRPMLILSSVLYFVSGLVMLW----------SPN 93 (706)
Q Consensus 28 ~lp~I~q~fGLS~s~igLl~S~~~Ig~~Igsl~~G~LaD----R~GRRrvLlig~iL~aIgsll~a~----------a~s 93 (706)
.+|.+.++..-.-+.-+++.....++....-+ ...+-. +...-+++++-+.+..++.++.++ +.+
T Consensus 33 ~lp~lv~elpe~wslpsyl~vvVqla~lgpLi-~tllhk~~~~~i~~VPiif~ll~~a~v~~l~laflW~~ts~V~g~~h 111 (439)
T KOG4255|consen 33 ELPLLVKELPEGWSLPSYLSVVVQLANLGPLI-VTLLHKGAPGTIPTVPIIFVLLLLACVCQLGLAFLWHDTSPVFGALH 111 (439)
T ss_pred ehhHHHhhcCcccccchHHHHHHHHHcchhHH-HHHHHhhCCCcCCCCCchhHHHHHHHHHHHHHHHHHhcchhhhcCcc
Confidence 45677777654443444444444444333222 222221 112223444444444566666665 234
Q ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCcchhh
Q 005249 94 VYVLCIARLLDGFGVGLAVTLVPLYISETAPSEIRG 129 (706)
Q Consensus 94 ~~lLli~R~L~GIg~G~~~~~~~a~IsE~fP~k~Rg 129 (706)
-|.++..-|...+...........++++.-|.--|.
T Consensus 112 S~afl~L~F~LAivdc~SnVtFLPFMs~lpp~fL~a 147 (439)
T KOG4255|consen 112 SWAFLSLLFGLAIVDCTSNVTFLPFMSQLPPAFLNA 147 (439)
T ss_pred hHHHHHHHHHHHHHHhhccchhhhhhhhCChHHHHH
Confidence 566777777777777777677777888777655444
No 325
>PF02632 BioY: BioY family; InterPro: IPR003784 BioMNY proteins are considered to constitute tripartite biotin transporters in prokaryotes. One-third of the widespread bioY genes are linked to bioMN. Many bioY genes are located at loci encoding biotin biosynthesis, while others are unlinked to biotin metabolic or transport genes. BioY is a high-capacity transporter that is converted to a high-affinity system in the presence of BioMN. BioMNY-mediated biotin uptake is severely impaired by the replacement of the Walker A lysine residue in BioM, demonstrating the dependency of high-affinity transport on a functional ATPase [].
Probab=24.64 E-value=3.6e+02 Score=26.38 Aligned_cols=26 Identities=19% Similarity=0.213 Sum_probs=21.4
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhCChH
Q 005249 47 VAMSLIGATAITTCSGPISDWLGRRP 72 (706)
Q Consensus 47 ~S~~~Ig~~Igsl~~G~LaDR~GRRr 72 (706)
+.-|.+++.+++.+.|++.+|..+++
T Consensus 59 TgGyl~gf~~~a~i~g~~~~~~~~~~ 84 (148)
T PF02632_consen 59 TGGYLLGFPLAALIIGLLAERLKRSR 84 (148)
T ss_pred CChHHHHHHHHHHHHHHHHHhccccc
Confidence 34577888899999999999988874
No 326
>COG1268 BioY Uncharacterized conserved protein [General function prediction only]
Probab=24.07 E-value=3.4e+02 Score=27.69 Aligned_cols=23 Identities=17% Similarity=0.179 Sum_probs=19.6
Q ss_pred HHHHHHHHHHHHHHHHHhhhhCC
Q 005249 48 AMSLIGATAITTCSGPISDWLGR 70 (706)
Q Consensus 48 S~~~Ig~~Igsl~~G~LaDR~GR 70 (706)
.-|.+++.+++++.|++.||.-+
T Consensus 89 gGyL~gfi~aa~l~G~l~~k~~~ 111 (184)
T COG1268 89 GGYLIGFIIAAFLIGLLAEKIRK 111 (184)
T ss_pred hhHHHHHHHHHHHHHHHHHhhhc
Confidence 45677889999999999999885
No 327
>TIGR00836 amt ammonium transporter. The mechanism of energy coupling, if any, to methyl-NH2 or NH3 uptake by the AmtB protein of E. coli is not entirely clear. NH4+ uniport driven by the pmf, energy independent NH3 facilitation, and NH4+/K+ antiport have been proposed as possible transport mechanisms. In Corynebacterium glutamicum and Arabidopsis thaliana, uptake via the Amt1 homologues of AmtB has been reported to be driven by the pmf.
Probab=23.85 E-value=7.3e+02 Score=28.28 Aligned_cols=49 Identities=10% Similarity=0.045 Sum_probs=28.9
Q ss_pred HHHHHHHHhHHHHHHHHHHhcCCcchhhHHhHHHHHHHHHHHHHHHHHH
Q 005249 102 LLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMFLAYCMV 150 (706)
Q Consensus 102 ~L~GIg~G~~~~~~~a~IsE~fP~k~Rg~a~Gi~~ag~~LG~alg~ll~ 150 (706)
++.|+..|........++.+.+.-+.---+..+...+.-+|.++..+..
T Consensus 283 ~viG~iag~~~~~~~~~l~~~~~iDD~~~~~~vHg~~Gi~G~i~~glfa 331 (403)
T TIGR00836 283 IIIGLVAGVLCYLAVSKLKKKLKIDDPLDAFAVHGVGGIWGLIATGLFA 331 (403)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCCCcccchhhhhhHHHHHHHHHHhc
Confidence 3445544444444555556665555545577787777777777764443
No 328
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=23.45 E-value=3.2e+02 Score=25.77 Aligned_cols=35 Identities=17% Similarity=0.269 Sum_probs=30.1
Q ss_pred CcchhhhHHHHHHHHHHHHHHHHHhHHHHHHHhhc
Q 005249 623 PTKVRGICIAICAMAYWICDIIVTYTLPVMLSSIG 657 (706)
Q Consensus 623 p~~~r~~~~~~~~~~~~~~~~i~~~~~~~~~~~~g 657 (706)
.++.++.+.++-...-.|+++++...+|++++.+-
T Consensus 36 a~s~k~~~~a~klssefIsGilVGa~iG~llD~~a 70 (116)
T COG5336 36 AESIKGYAQAFKLSSEFISGILVGAGIGWLLDKFA 70 (116)
T ss_pred chhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 45567888899899999999999999999999863
No 329
>KOG1277 consensus Endosomal membrane proteins, EMP70 [Intracellular trafficking, secretion, and vesicular transport]
Probab=23.09 E-value=4.7e+02 Score=30.56 Aligned_cols=30 Identities=17% Similarity=0.309 Sum_probs=17.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH----hhhhCChH
Q 005249 43 EGLVVAMSLIGATAITTCSGPI----SDWLGRRP 72 (706)
Q Consensus 43 igLl~S~~~Ig~~Igsl~~G~L----aDR~GRRr 72 (706)
-|-+.++.-+.+++.+++.|+. .-|.|-|+
T Consensus 325 rGal~saaI~vYAlTs~i~GY~~gs~Y~r~gG~~ 358 (593)
T KOG1277|consen 325 RGALLSAAIVVYALTSPINGYVSGSFYARLGGRR 358 (593)
T ss_pred chHHHHHHHHHHHhcccccccccceeeehhccHH
Confidence 4445555566666666666655 45666443
No 330
>COG4769 Predicted membrane protein [Function unknown]
Probab=22.74 E-value=1.9e+02 Score=29.12 Aligned_cols=54 Identities=13% Similarity=0.007 Sum_probs=36.5
Q ss_pred HHHHHHHHHHHHHHHhhhhCChHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHH
Q 005249 50 SLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVMLWSPNVYVLCIARLLDGFGVG 109 (706)
Q Consensus 50 ~~Ig~~Igsl~~G~LaDR~GRRrvLlig~iL~aIgsll~a~a~s~~lLli~R~L~GIg~G 109 (706)
+.+..++.+...-++..++|+|..-.++.-. ..++.+|..++++++++.+-..-
T Consensus 82 ~sfaG~i~S~L~m~~l~~f~~k~~S~lgiS~------mGaF~hNl~QLivas~Lv~~~~v 135 (181)
T COG4769 82 YSFAGAILSTLFMYFLYQFGPKYLSLLGISV------MGAFTHNLGQLIVASFLVFTTSV 135 (181)
T ss_pred HHHHHHHHHHHHHHHHHHcCCceEeeeehhh------HHHHHHhHHHHHHHHHHHhcchH
Confidence 3444555566666788899988874444322 34578899999999988875443
No 331
>PF06570 DUF1129: Protein of unknown function (DUF1129); InterPro: IPR009214 There are currently no experimental data for members of this group or their homologues. However, these proteins contain predicted integral membrane proteins (with several transmembrane segments).
Probab=22.62 E-value=8.2e+02 Score=24.84 Aligned_cols=18 Identities=22% Similarity=0.176 Sum_probs=7.5
Q ss_pred HHHHHHhHHHHHHHHHHh
Q 005249 104 DGFGVGLAVTLVPLYISE 121 (706)
Q Consensus 104 ~GIg~G~~~~~~~a~IsE 121 (706)
.++..|..+.....++..
T Consensus 119 ~~i~~G~~~~~~~~~i~~ 136 (206)
T PF06570_consen 119 VSIVGGLVFYFIFKYIYP 136 (206)
T ss_pred HHHHHHHHHHHHHHHHhc
Confidence 344444444444444443
No 332
>TIGR00918 2A060602 The Eukaryotic (Putative) Sterol Transporter (EST) Family.
Probab=20.77 E-value=2e+03 Score=28.56 Aligned_cols=21 Identities=19% Similarity=0.311 Sum_probs=10.7
Q ss_pred HHHHHHHHHhHHHHHHHHHHh
Q 005249 101 RLLDGFGVGLAVTLVPLYISE 121 (706)
Q Consensus 101 R~L~GIg~G~~~~~~~a~IsE 121 (706)
-...|++.....-+...+...
T Consensus 1026 imsIGisVefsaHI~~~F~~~ 1046 (1145)
T TIGR00918 1026 IASVGIGVEFTVHIALGFLTA 1046 (1145)
T ss_pred HHHHhhhhhhhHHHHHHHHhc
Confidence 334555555544455666643
No 333
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=20.19 E-value=1.4e+03 Score=27.29 Aligned_cols=49 Identities=16% Similarity=0.184 Sum_probs=39.0
Q ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHhcCCcchhhHHhHHHHHHHHHHHH
Q 005249 96 VLCIARLLDGFGVGLAVTLVPLYISETAPSEIRGRLNTLPQFTGSGGMF 144 (706)
Q Consensus 96 lLli~R~L~GIg~G~~~~~~~a~IsE~fP~k~Rg~a~Gi~~ag~~LG~a 144 (706)
.+++.-++..+.....+++..++-+...+|..=|+.|.+.++..++|.-
T Consensus 407 lvI~~~~l~sf~stvmFVai~AFharISDP~IGGTYMTLLNTvSNLGGt 455 (544)
T PF13000_consen 407 LVIIQHVLSSFMSTVMFVAIMAFHARISDPAIGGTYMTLLNTVSNLGGT 455 (544)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhccCcccchHHHHHHHHHHhcCCC
Confidence 3334466666777788888889999999999999999999888887763
No 334
>PF00860 Xan_ur_permease: Permease family; InterPro: IPR006043 This entry represents a susbset of the wider APC (Amino acid-Polyamine-organoCation) superfamily of transporters []. Characterised proteins in this entry include: Xanthine permease PbuX, involved in cellualar xanthine transport [] Uric acid permeases which promotes uptake of uric acid into the cell in limiting-nitrogen conditions [] Uracil permease [] Sodium-dependent vitamin C transporter, a sodium/ascorbate cotransporter mediating electrogenic uptake of Vitamin C [] These proteins generally contain 12 transmembrane regions. Many members of this family are uncharacterised and may transport other substrates eg. RutG is likely to transport pyrimidines into the cell [].; GO: 0005215 transporter activity, 0006810 transport, 0055085 transmembrane transport, 0016020 membrane; PDB: 3QE7_A.
Probab=20.18 E-value=2.8e+02 Score=30.95 Aligned_cols=93 Identities=14% Similarity=0.126 Sum_probs=46.3
Q ss_pred HHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhhCChHHHHHHHHHHHHHHHHHHh------hhhHHHHHHHHHHHHHH
Q 005249 34 KDLNLGTTVEGLVVAMSLIGATAITTCSGPISDWLGRRPMLILSSVLYFVSGLVMLW------SPNVYVLCIARLLDGFG 107 (706)
Q Consensus 34 q~fGLS~s~igLl~S~~~Ig~~Igsl~~G~LaDR~GRRrvLlig~iL~aIgsll~a~------a~s~~lLli~R~L~GIg 107 (706)
+.+|. ..+...+.+...+...+++++-+. +.|.|..+.-+.-...+....... ..++..+..+-++.|+.
T Consensus 27 ~~~g~-~~~~~~li~at~l~sgi~Tllq~~---~~g~~lpl~~G~s~~~~~~~~~~~g~~~~~~~~~~~~~g~~~i~gi~ 102 (389)
T PF00860_consen 27 AAFGL-DADTAALISATFLVSGIATLLQGL---PAGHRLPLVPGPSFAFIFAFMIVIGMAESGGYGLQAALGAVLISGIL 102 (389)
T ss_dssp S------------HHHHHHHHHHHHHHHHH---HTTT-----EEE-GGGHHHHHGGG-----HHHHHHHHHHHHHHHHHH
T ss_pred hcccc-cchhhHHHHHHHHHHHHHHHHHHh---cCCCceecccccchhhhhhhhcccccccchhhchhhhhhHHHHHHHH
Confidence 34577 555667788888999999998888 889888888665555444332222 23555566666666765
Q ss_pred HHhHHHHHH-HHHHhcCCcchhhH
Q 005249 108 VGLAVTLVP-LYISETAPSEIRGR 130 (706)
Q Consensus 108 ~G~~~~~~~-a~IsE~fP~k~Rg~ 130 (706)
.-....... ..+.+++|+..++.
T Consensus 103 ~~~l~~~g~~~~l~~~~pp~v~g~ 126 (389)
T PF00860_consen 103 FILLGLTGLRKRLRRLFPPVVKGA 126 (389)
T ss_dssp HHHHHTT-SH-HHHHH--HHHHHH
T ss_pred HHHHHHhchHHHHHHHhChhheEe
Confidence 544433332 37788888876654
No 335
>KOG2887 consensus Membrane protein involved in ER to Golgi transport [Intracellular trafficking, secretion, and vesicular transport]
Probab=20.03 E-value=9.3e+02 Score=24.48 Aligned_cols=78 Identities=17% Similarity=0.283 Sum_probs=48.4
Q ss_pred HHHHHHHHHHHHHhhcccccchhhhhcccCCcchhhhHHHHHHHHHHHHHHHHHhHHHHHHHhhchhhHHHHHHHHHHHH
Q 005249 593 GISTACVIIYFCCFVAAYGPIPNILCAEIFPTKVRGICIAICAMAYWICDIIVTYTLPVMLSSIGLAGAFGVYAVVCFIS 672 (706)
Q Consensus 593 ~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~~~~i~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 672 (706)
...+...++.+..|++-.||..+ ....+.++.+- .....++..+.+.......++.+....|.++=+++++.
T Consensus 79 l~~TlGnll~i~sf~fLmGP~~q--l~~m~~p~Rl~------~T~~~l~~~~~Tly~al~~ks~iLtllf~ilq~laliw 150 (175)
T KOG2887|consen 79 LLYTLGNLLAIGSFAFLMGPVSQ--LKHMFSPERLP------ATLSYLATMVLTLYVALWLKSKILTLLFCILQVLALIW 150 (175)
T ss_pred hhHHHHHHHHHHHHHHHHhHHHH--HHHhcChhHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34445555566666666677653 34555554332 22445667777888877888888777777777776666
Q ss_pred HHHHHh
Q 005249 673 WVFVFL 678 (706)
Q Consensus 673 ~~~~~~ 678 (706)
-.+.++
T Consensus 151 YslSyi 156 (175)
T KOG2887|consen 151 YSLSYI 156 (175)
T ss_pred HHHHhC
Confidence 555554
Done!