Your job contains 1 sequence.
>005254
MASLPLKKSYGCEPVLQQFYGGGPLVVSSDGSFIACACGESINIVDLSNASIKSTIEGGS
DTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATA
GADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKC
VATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYEMVEAVCAIPP
GSAFDSFLSSYNQQTIKKKRRSLEIHFITVGERGIVRMWNADSACLYEQKSSDVTISFEM
DDSKRGFTAATVLPSNQGLLCVTADQQLLLYTTVEVPEKKMELILSKRLVGYNEEILDLK
FLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKD
NSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQ
PMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIW
SVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADG
LVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLWHDSTAAEREEAFR
KEEEAVLRGQELENAVLDADYTKAIQVAFELRRPHKLFELFASVCR
The BLAST search returned 2 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 005254
(706 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2148965 - symbol:TOZ "AT5G16750" species:3702 ... 2706 1.3e-281 1
UNIPROTKB|F1NM37 - symbol:TBL3 "Uncharacterized protein" ... 1405 9.6e-144 1
ZFIN|ZDB-GENE-041114-104 - symbol:tbl3 "transducin (beta)... 1393 1.8e-142 1
UNIPROTKB|F1Q065 - symbol:TBL3 "Uncharacterized protein" ... 889 6.2e-142 2
UNIPROTKB|F1MNS4 - symbol:TBL3 "Transducin beta-like prot... 885 2.7e-141 2
UNIPROTKB|Q2KJJ5 - symbol:TBL3 "Transducin beta-like prot... 885 2.7e-141 2
RGD|1305142 - symbol:Tbl3 "transducin (beta)-like 3" spec... 888 4.4e-141 2
MGI|MGI:2384863 - symbol:Tbl3 "transducin (beta)-like 3" ... 896 9.1e-141 2
UNIPROTKB|Q12788 - symbol:TBL3 "Transducin beta-like prot... 866 8.2e-138 2
DICTYBASE|DDB_G0276283 - symbol:utp13 "U3 snoRNP protein"... 1172 4.7e-119 1
CGD|CAL0000293 - symbol:UTP13 species:5476 "Candida albic... 607 2.4e-89 2
UNIPROTKB|Q5AGB1 - symbol:CaO19.11744 "Putative uncharact... 607 2.4e-89 2
SGD|S000004212 - symbol:UTP13 "Nucleolar protein" species... 872 2.9e-87 1
UNIPROTKB|J3KNP2 - symbol:TBL3 "Transducin beta-like prot... 802 7.6e-80 1
FB|FBgn0033454 - symbol:CG1671 species:7227 "Drosophila m... 682 2.3e-74 2
UNIPROTKB|I3LPF4 - symbol:TBL3 "Uncharacterized protein" ... 489 1.7e-71 2
POMBASE|SPCC16A11.02 - symbol:utp13 "U3 snoRNP-associated... 701 3.8e-69 1
WB|WBGene00013143 - symbol:Y53C12B.1 species:6239 "Caenor... 438 2.4e-56 2
ASPGD|ASPL0000073843 - symbol:AN4460 species:162425 "Emer... 305 5.7e-49 2
ASPGD|ASPL0000032162 - symbol:AN8468 species:162425 "Emer... 472 4.7e-41 2
DICTYBASE|DDB_G0282623 - symbol:wdr3 "U3 snoRNP protein" ... 316 1.6e-40 3
UNIPROTKB|F1NC11 - symbol:WDR3 "Uncharacterized protein" ... 301 2.4e-39 2
MGI|MGI:2443143 - symbol:Wdr3 "WD repeat domain 3" specie... 288 2.6e-38 2
RGD|1307480 - symbol:Wdr3 "WD repeat domain 3" species:10... 284 5.1e-37 2
SGD|S000004119 - symbol:DIP2 "Nucleolar protein" species:... 305 5.4e-36 2
UNIPROTKB|J9PAK6 - symbol:TBL3 "Uncharacterized protein" ... 394 6.2e-36 1
UNIPROTKB|G4MTR1 - symbol:MGG_04746 "DOM34-interacting pr... 331 1.9e-34 2
UNIPROTKB|Q0P593 - symbol:WDR69 "Outer row dynein assembl... 334 4.0e-33 2
ASPGD|ASPL0000054401 - symbol:AN0305 species:162425 "Emer... 276 2.8e-31 2
DICTYBASE|DDB_G0295761 - symbol:nle1 "putative notchless"... 237 3.3e-31 2
UNIPROTKB|Q9UNX4 - symbol:WDR3 "WD repeat-containing prot... 372 6.9e-31 1
DICTYBASE|DDB_G0288375 - symbol:lis1 "lissencephaly-1 hom... 269 1.2e-30 2
POMBASE|SPBC3D6.12 - symbol:dip2 "U3 snoRNA associated pr... 307 1.7e-30 2
TAIR|locus:2089855 - symbol:AT3G21540 "AT3G21540" species... 367 2.5e-30 1
UNIPROTKB|E1BM03 - symbol:WDR3 "Uncharacterized protein" ... 365 4.1e-30 1
UNIPROTKB|F1SAY9 - symbol:WDR3 "Uncharacterized protein" ... 364 5.3e-30 1
ZFIN|ZDB-GENE-050419-255 - symbol:daw1 "dynein assembly f... 330 5.8e-29 1
UNIPROTKB|E1BR73 - symbol:APAF1 "Uncharacterized protein"... 182 1.1e-28 3
UNIPROTKB|F1P1P3 - symbol:APAF1 "Uncharacterized protein"... 182 1.1e-28 3
RGD|1561436 - symbol:LOC363267 "hypothetical protein LOC3... 327 1.2e-28 1
UNIPROTKB|Q8N136 - symbol:WDR69 "Outer row dynein assembl... 323 3.3e-28 1
UNIPROTKB|Q96DI7 - symbol:SNRNP40 "U5 small nuclear ribon... 230 3.3e-28 2
MGI|MGI:1913835 - symbol:Snrnp40 "small nuclear ribonucle... 231 4.0e-28 2
UNIPROTKB|Q2HJH6 - symbol:SNRNP40 "U5 small nuclear ribon... 230 5.6e-28 2
UNIPROTKB|F1MLP7 - symbol:SNRNP40 "U5 small nuclear ribon... 230 5.6e-28 2
UNIPROTKB|F1SVA6 - symbol:SNRNP40 "Uncharacterized protei... 230 5.6e-28 2
POMBASE|SPAC29E6.01 - symbol:pof11 "F-box protein Pof11" ... 336 6.5e-28 1
UNIPROTKB|F1NUK8 - symbol:SNRNP40 "Uncharacterized protei... 227 1.4e-26 2
ASPGD|ASPL0000006214 - symbol:AN6385 species:162425 "Emer... 273 5.4e-26 2
ZFIN|ZDB-GENE-040426-978 - symbol:snrnp40 "small nuclear ... 227 7.7e-26 2
SGD|S000000668 - symbol:RSA4 "WD-repeat protein involved ... 302 2.1e-25 2
MGI|MGI:1916794 - symbol:Wdr5b "WD repeat domain 5B" spec... 296 2.8e-25 1
TAIR|locus:2140215 - symbol:WDR5b "AT4G02730" species:370... 249 3.0e-25 2
WB|WBGene00021074 - symbol:W07E6.2 species:6239 "Caenorha... 200 2.0e-24 2
UNIPROTKB|F1SQT5 - symbol:APAF1 "Uncharacterized protein"... 313 3.3e-24 1
DICTYBASE|DDB_G0287273 - symbol:wdr5 "WD40 repeat-contain... 285 4.2e-24 1
UNIPROTKB|F1N9W1 - symbol:FBXW7 "Uncharacterized protein"... 255 4.6e-24 2
UNIPROTKB|F1MNN4 - symbol:FBXW7 "Uncharacterized protein"... 255 5.8e-24 2
ASPGD|ASPL0000037303 - symbol:copA species:162425 "Emeric... 221 6.2e-24 2
MGI|MGI:1354695 - symbol:Fbxw7 "F-box and WD-40 domain pr... 255 7.7e-24 2
ASPGD|ASPL0000038644 - symbol:AN10391 species:162425 "Eme... 303 8.0e-24 1
UNIPROTKB|Q969H0 - symbol:FBXW7 "F-box/WD repeat-containi... 255 8.8e-24 2
UNIPROTKB|E2QUZ3 - symbol:FBXW7 "Uncharacterized protein"... 255 9.0e-24 2
MGI|MGI:2429770 - symbol:Nle1 "notchless homolog 1 (Droso... 249 1.1e-23 2
UNIPROTKB|F1NUJ8 - symbol:POC1A "Uncharacterized protein"... 281 1.1e-23 1
WB|WBGene00004767 - symbol:sel-10 species:6239 "Caenorhab... 256 1.2e-23 2
UNIPROTKB|Q93794 - symbol:sel-10 "F-box/WD repeat-contain... 256 1.2e-23 2
ZFIN|ZDB-GENE-090313-79 - symbol:fbxw7 "F-box and WD repe... 255 1.4e-23 2
UNIPROTKB|G3N3E5 - symbol:WDR5 "WD repeat-containing prot... 280 1.5e-23 1
UNIPROTKB|Q2KIG2 - symbol:WDR5 "WD repeat-containing prot... 280 1.5e-23 1
UNIPROTKB|P61964 - symbol:WDR5 "WD repeat-containing prot... 280 1.5e-23 1
UNIPROTKB|F1S034 - symbol:WDR5 "Uncharacterized protein" ... 280 1.5e-23 1
MGI|MGI:2155884 - symbol:Wdr5 "WD repeat domain 5" specie... 280 1.5e-23 1
RGD|1305159 - symbol:Wdr5 "WD repeat domain 5" species:10... 280 1.5e-23 1
TAIR|locus:2176897 - symbol:AT5G52820 "AT5G52820" species... 217 1.7e-23 2
UNIPROTKB|I3L3N5 - symbol:PAFAH1B1 "Platelet-activating f... 199 2.0e-23 2
UNIPROTKB|B4DF38 - symbol:PAFAH1B1 "Platelet-activating f... 199 2.0e-23 2
POMBASE|SPBPJ4664.04 - symbol:SPBPJ4664.04 "coatomer alph... 225 2.0e-23 2
UNIPROTKB|G4MUR7 - symbol:MGG_08829 "Transcriptional repr... 277 2.3e-23 2
FB|FBgn0030365 - symbol:Tango4 "Transport and Golgi organ... 264 2.3e-23 2
RGD|1308301 - symbol:Nle1 "notchless homolog 1 (Drosophil... 248 2.4e-23 2
UNIPROTKB|Q5M786 - symbol:wdr5 "WD repeat-containing prot... 278 2.4e-23 1
TAIR|locus:2050064 - symbol:AT2G21390 species:3702 "Arabi... 206 2.5e-23 2
UNIPROTKB|J9NS21 - symbol:APAF1 "Apoptotic protease-activ... 184 4.1e-23 2
MGI|MGI:1306796 - symbol:Apaf1 "apoptotic peptidase activ... 279 5.2e-23 2
TAIR|locus:2036823 - symbol:AT1G62020 species:3702 "Arabi... 206 6.4e-23 2
FB|FBgn0025725 - symbol:alphaCop "alpha-coatomer protein"... 209 6.5e-23 2
UNIPROTKB|E1BS49 - symbol:APAF1 "Uncharacterized protein"... 182 6.5e-23 3
UNIPROTKB|F1SIZ2 - symbol:POC1A "Uncharacterized protein"... 272 1.1e-22 1
UNIPROTKB|Q9Y263 - symbol:PLAA "Phospholipase A-2-activat... 296 1.1e-22 1
POMBASE|SPAC227.12 - symbol:SPAC227.12 "U4/U6 x U5 tri-sn... 289 1.1e-22 1
POMBASE|SPAC18B11.10 - symbol:tup11 "transcriptional core... 293 1.3e-22 1
DICTYBASE|DDB_G0282189 - symbol:tupA "transcriptional rep... 291 1.8e-22 1
FB|FBgn0040066 - symbol:wds "will die slowly" species:722... 270 1.8e-22 1
POMBASE|SPBC713.04c - symbol:SPBC713.04c "U3 snoRNP-assoc... 250 2.0e-22 2
DICTYBASE|DDB_G0286735 - symbol:DDB_G0286735 "C3HC4-type ... 213 2.1e-22 2
UNIPROTKB|H9L3L2 - symbol:LOC100859596 "Uncharacterized p... 218 3.1e-22 2
UNIPROTKB|P49027 - symbol:RACK1A "Guanine nucleotide-bind... 245 3.3e-22 2
UNIPROTKB|H9KZL3 - symbol:LOC100859596 "Uncharacterized p... 218 3.4e-22 2
RGD|620575 - symbol:Apaf1 "apoptotic peptidase activating... 267 3.6e-22 2
WARNING: Descriptions of 1729 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2148965 [details] [associations]
symbol:TOZ "AT5G16750" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0009793
"embryo development ending in seed dormancy" evidence=RCA;IMP]
[GO:0009880 "embryonic pattern specification" evidence=RCA;IMP]
[GO:0051301 "cell division" evidence=RCA;IMP] [GO:0001510 "RNA
methylation" evidence=RCA] [GO:0006406 "mRNA export from nucleus"
evidence=RCA] [GO:0006606 "protein import into nucleus"
evidence=RCA] [GO:0007062 "sister chromatid cohesion" evidence=RCA]
[GO:0009640 "photomorphogenesis" evidence=RCA] [GO:0009845 "seed
germination" evidence=RCA] [GO:0009909 "regulation of flower
development" evidence=RCA] [GO:0009933 "meristem structural
organization" evidence=RCA] [GO:0010072 "primary shoot apical
meristem specification" evidence=RCA] [GO:0010162 "seed dormancy
process" evidence=RCA] [GO:0010182 "sugar mediated signaling
pathway" evidence=RCA] [GO:0010228 "vegetative to reproductive
phase transition of meristem" evidence=RCA] [GO:0010431 "seed
maturation" evidence=RCA] [GO:0010564 "regulation of cell cycle
process" evidence=RCA] [GO:0016567 "protein ubiquitination"
evidence=RCA] [GO:0019915 "lipid storage" evidence=RCA] [GO:0045595
"regulation of cell differentiation" evidence=RCA] [GO:0048366
"leaf development" evidence=RCA] [GO:0048825 "cotyledon
development" evidence=RCA] [GO:0050826 "response to freezing"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR013934 InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 EMBL:CP002688
GO:GO:0005730 GO:GO:0051301 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0009793 GO:GO:0009880 GO:GO:0006364
HSSP:P16649 GO:GO:0032040 EMBL:AL391147 HOGENOM:HOG000188765
KO:K14555 OMA:ADSKLIR IPI:IPI00523827 PIR:T51507 RefSeq:NP_568338.2
UniGene:At.24110 ProteinModelPortal:Q9LFE2 SMR:Q9LFE2 STRING:Q9LFE2
PRIDE:Q9LFE2 EnsemblPlants:AT5G16750.1 GeneID:831538
KEGG:ath:AT5G16750 TAIR:At5g16750 InParanoid:Q9LFE2
PhylomeDB:Q9LFE2 ProtClustDB:CLSN2680022 Genevestigator:Q9LFE2
Uniprot:Q9LFE2
Length = 876
Score = 2706 (957.6 bits), Expect = 1.3e-281, P = 1.3e-281
Identities = 507/712 (71%), Positives = 603/712 (84%)
Query: 1 MASLPLKKSYGCEPVLQQFYGGGPLVVSSDGSFIACACGESINIVDLSNASIKSTIEGGS 60
MA LKK+Y C L+QFYGGGP +VSSDGSFIACACG+ INIVD +++S+KSTIEG S
Sbjct: 1 MAPHSLKKNYRCSRSLKQFYGGGPFIVSSDGSFIACACGDVINIVDSTDSSVKSTIEGES 60
Query: 61 DTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATA 120
DT+TALALSPDDKLLFS+GHSR+IRVWDL TLKC+RSWKGH+GP +GMACH SGGLLATA
Sbjct: 61 DTLTALALSPDDKLLFSAGHSRQIRVWDLETLKCIRSWKGHEGPVMGMACHASGGLLATA 120
Query: 121 GADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAK-- 178
GADRKVLVWDVDGGFCTHYF+GHKGVVSSILFHPD++K++L SGSDDATVRVWDL AK
Sbjct: 121 GADRKVLVWDVDGGFCTHYFRGHKGVVSSILFHPDSNKNILISGSDDATVRVWDLNAKNT 180
Query: 179 --KCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYEMVEAVC 236
KC+A ++KHFS VTS+A++ DG TL SAGRDKVVNLWDL DYSCK TV TYE++EAV
Sbjct: 181 EKKCLAIMEKHFSAVTSIALSEDGLTLFSAGRDKVVNLWDLHDYSCKATVATYEVLEAVT 240
Query: 237 AIPPGSAFDSFLSSYNQQTIKKKRR-SLEIHFITVGERGIVRMWNAD-SACLYEQKSSDV 294
+ G+ F SF++S +Q+ KKK S +FITVGERG+VR+W ++ S CLYEQKSSD+
Sbjct: 241 TVSSGTPFASFVASLDQKKSKKKESDSQATYFITVGERGVVRIWKSEGSICLYEQKSSDI 300
Query: 295 TISFEMDDSKRGFTAATVLPSNQGLLCVTADQQLLLYTTVEVPEKKMELILSKRLVGYNE 354
T+S + ++SKRGFTAA +LPS+ GLLCVTADQQ Y+ VE E+ EL+LSKRLVGYNE
Sbjct: 301 TVSSDDEESKRGFTAAAMLPSDHGLLCVTADQQFFFYSVVENVEET-ELVLSKRLVGYNE 359
Query: 355 EILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILI 414
EI D+KFLG+EEQ+LAVATN+E+V+VYD+++MSCSYVLAGH E+VL LDTC SSG +LI
Sbjct: 360 EIADMKFLGDEEQFLAVATNLEEVRVYDVATMSCSYVLAGHKEVVLSLDTCVSSSGNVLI 419
Query: 415 VTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGL 474
VTGSKD +VRLW++ S+ C+GVGTGH G + AVAF+KK +F VSGS D T+KVWS DG+
Sbjct: 420 VTGSKDKTVRLWNATSKSCIGVGTGHNGDILAVAFAKKSFSFFVSGSGDRTLKVWSLDGI 479
Query: 475 SDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRG 534
S+D+E+P+NLK ++VVAAH KDINS+AVA NDSLVCTGS+DRTA +WRLPDLV VVT +G
Sbjct: 480 SEDSEEPINLKTRSVVAAHDKDINSVAVARNDSLVCTGSEDRTASIWRLPDLVHVVTLKG 539
Query: 535 HKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIV 594
HKR I+SVEFS VDQ V+TASGDKT+KIW+ISDGSCLKTFEGHTSSVLRASF+T G Q V
Sbjct: 540 HKRRIFSVEFSTVDQCVMTASGDKTVKIWAISDGSCLKTFEGHTSSVLRASFITDGTQFV 599
Query: 595 SCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLWHDSTXXX 654
SCGADGL+KLW V T ECIATYD+HEDK+WALAVGKKTEM ATGG DA++NLWHDST
Sbjct: 600 SCGADGLLKLWNVNTSECIATYDQHEDKVWALAVGKKTEMIATGGGDAVINLWHDSTASD 659
Query: 655 XXXXXXXXXXXVLRGQELENAVLDADYTKAIQVAFELRRPHKLFELFASVCR 706
+LRGQELENAVLDA+YTKAI++AFEL RPHK+FELF+ +CR
Sbjct: 660 KEDDFRKEEEAILRGQELENAVLDAEYTKAIRLAFELCRPHKVFELFSGLCR 711
>UNIPROTKB|F1NM37 [details] [associations]
symbol:TBL3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0006364 "rRNA processing" evidence=IEA] [GO:0032040
"small-subunit processome" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR013934 InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006364
GO:GO:0032040 OMA:HHFRGSP GeneTree:ENSGT00690000102183
EMBL:AADN02023671 EMBL:AADN02023670 IPI:IPI00583117
Ensembl:ENSGALT00000008918 Uniprot:F1NM37
Length = 812
Score = 1405 (499.6 bits), Expect = 9.6e-144, P = 9.6e-144
Identities = 281/712 (39%), Positives = 422/712 (59%)
Query: 7 KKSYGCEPVLQQFYGGGPLVVSSDGSFIACACGESINIVDLSNASIKSTIE-GGSDTITA 65
K +Y ++ FY GG + VS DG F+ C CG +N++D+ ++ ++E + IT+
Sbjct: 13 KSNYAVSRRIEPFYKGGRVQVSRDGKFMFCPCGTKLNVIDVETGALLHSLEQDDQEDITS 72
Query: 66 LALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKG-HDGPAIGMACHPSGGLLATAGADR 124
LSPDD++L + + ++ W+ +C+R+WK H P M + LLAT G D
Sbjct: 73 FVLSPDDEVLVTGSRALLLKQWNWRENRCVRTWKAVHIAPVATMVFDSTSTLLATGGCDS 132
Query: 125 KVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATL 184
+ +WD+ +CTH KG GVV + FHPD + LFS S D +R+WDL + KCVA L
Sbjct: 133 TIKIWDMIKQYCTHNLKGSSGVVHLVEFHPDISRLQLFSSSMDYKIRIWDLNSSKCVAVL 192
Query: 185 DKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYEMVEAVCAIPPGSAF 244
D HFS VTS+A T+DG+TLIS+GRDK+ +W+L+ T+P YE VEA +P F
Sbjct: 193 DGHFSAVTSLAFTADGNTLISSGRDKICMVWNLKTRESIRTIPIYESVEAAVLLPEQGDF 252
Query: 245 DSFLSSYNQQTIKKKRRSLEIHFITVGERGIVRMWN-ADSACLYEQKSSDVTISFEMDDS 303
+Q +KK+ +HF+T G +G++++W A +AC+Y Q + E + S
Sbjct: 253 -------SQLGVKKQG----LHFLTAGSKGVLKVWEVATAACVYSQPVPFEPVESEEEAS 301
Query: 304 KRGFTAATVLPSNQGLLCVTADQQLLLYTTVEVPEKKMELILSKRLVGYNEEILDLKFLG 363
+ T ++P ++ V+ + ++ Y L L K+L GYN+E+LD+KFLG
Sbjct: 302 EHSLTHCMLVPERNEIVTVSVEHNIVFYDA-------QTLQLRKQLAGYNDEVLDVKFLG 354
Query: 364 EEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSV 423
+ ++ VATN Q++V++LS+ C +L GH+E +L LD G ++ V+ +KD S+
Sbjct: 355 PGDSHIVVATNSPQLKVFELSTSHCQ-ILYGHTETILALDV--FRKG-LMFVSCAKDKSI 410
Query: 424 RLW--DSESRC-CVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSF-DGLSDDAE 479
R+W + + R CV G GH VGAV+ S+ ++F+V+ S D TIKVW+ + L+ A+
Sbjct: 411 RVWRMNKDGRVVCVAQGLGHAHGVGAVSCSRLKESFVVTSSQDCTIKVWNIPESLTSKAK 470
Query: 480 Q-----PMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRG 534
P L A+ H KDINS+AV+PND L+ TGSQDR A +W PD + F G
Sbjct: 471 AALISGPETLHAQMTERGHDKDINSVAVSPNDKLIATGSQDRLAKLWSCPDCSLLGVFTG 530
Query: 535 HKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIV 594
HKRGIW V+FSPVDQ++ T+S D T+K+W + D SCLKTFEGH +SVL+ F++RG Q++
Sbjct: 531 HKRGIWCVQFSPVDQILATSSADGTLKLWGLQDFSCLKTFEGHDASVLKIIFVSRGTQLL 590
Query: 595 SCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLWHDSTXXX 654
S G+DGL+KLWT++T EC+ T D HEDKIW L K+ +M T SD+ + LW D T
Sbjct: 591 SGGSDGLLKLWTIKTNECVKTLDGHEDKIWGLHTNKQDDMVVTASSDSSITLWKDVTEIE 650
Query: 655 XXXXXXXXXXXVLRGQELENAVLDADYTKAIQVAFELRRPHKLFELFASVCR 706
+++ QEL N + + Y KA+ +A L RPH + + ++ +
Sbjct: 651 QEEAQAKREEQIMKEQELSNLLHEKRYLKALGLAISLDRPHTVLTVIKAILK 702
>ZFIN|ZDB-GENE-041114-104 [details] [associations]
symbol:tbl3 "transducin (beta)-like 3" species:7955
"Danio rerio" [GO:0032040 "small-subunit processome" evidence=IEA]
[GO:0006364 "rRNA processing" evidence=IEA] [GO:0003674
"molecular_function" evidence=ND] [GO:0010564 "regulation of cell
cycle process" evidence=IMP] [GO:0030098 "lymphocyte
differentiation" evidence=IMP] [GO:0048538 "thymus development"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR013934 InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-041114-104 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0048538 GO:GO:0006364 GO:GO:0032040
GO:GO:0010564 GO:GO:0030098 GeneTree:ENSGT00690000102183
EMBL:CABZ01040209 EMBL:CABZ01040210 EMBL:CABZ01079585
EMBL:CABZ01079586 IPI:IPI00489593 Ensembl:ENSDART00000074174
ArrayExpress:F1QYF0 Bgee:F1QYF0 Uniprot:F1QYF0
Length = 898
Score = 1393 (495.4 bits), Expect = 1.8e-142, P = 1.8e-142
Identities = 282/658 (42%), Positives = 413/658 (62%)
Query: 3 SLPLKKSYGCEPVLQQFYGGGPLVVSSDGSFIACACGESINIVDLSNASIKSTIEG-GSD 61
+L K +Y ++ FY GG + VS D I C G INI+ +S I +IE +
Sbjct: 5 TLLFKSNYAVSSRIEPFYKGGKVQVSGDEQHIFCTYGPKINILQISTGKIIHSIEQEDQE 64
Query: 62 TITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKG-HDGPAIGMACHPSGGLLATA 120
ITA ALSPDD++L S+ + +R WD +C RSW+ H P M+ + LLAT
Sbjct: 65 DITAFALSPDDEMLVSASRALLLRQWDWKQQQCRRSWRAVHSVPVASMSFDCTSTLLATG 124
Query: 121 GADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKC 180
G D + +WDV +CTH KG GVV + FHPD + LFS S D +R+WDL + +C
Sbjct: 125 GCDGTIKLWDVIKQYCTHNLKGSSGVVHLVEFHPDISRLQLFSSSSDCAIRIWDLRSSRC 184
Query: 181 VATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYEMVEAVCAIPP 240
V L+ H+S VT++A + DG TL+S+GRDK+ ++WDL++ K T+P YE VE V +
Sbjct: 185 VCVLESHYSPVTALAFSPDGHTLVSSGRDKICSVWDLQEQKVKRTIPVYEAVEGVVLLS- 243
Query: 241 GSAFDSFLSSYNQQTIKKKRRSLEIHFITVGERGIVRMWNADSA-CLYEQKSSDVTISFE 299
GSA Y++ +K S +H +T G +G++R+W++ S+ C++ Q D + E
Sbjct: 244 GSA------DYSEMGVK----SDALHLVTAGSKGVLRVWDSSSSRCVFTQTLPDASSHTE 293
Query: 300 MDDS----KRGFTAATVLPSNQGLLCVTADQQLLLYTTVEVPEKKMELILSKRLVGYNEE 355
+D+ + G +LP L+ VTA+ +LLY T P L + ++ VGYN++
Sbjct: 294 DEDAEDEERLGLLQLLLLPRTGRLITVTAEHNILLYQT---PT----LAVQQQFVGYNDD 346
Query: 356 ILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIV 415
+LD+KF+G+++ ++AVATN Q++V++LS+ SC +L GH++ +L +D S +
Sbjct: 347 VLDVKFVGKDDTHIAVATNSSQLKVFELSTNSCQ-ILHGHTDTILSIDVFRKGS---MFA 402
Query: 416 TGSKDNSVRLW--D-SESRC-CVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSF 471
T +KD SVR+W D S R CV GTGH AVG++A S+ Q F+VSGS D T+KVW
Sbjct: 403 TCAKDKSVRVWRMDVSSGRVHCVAQGTGHSNAVGSIACSRMKQQFVVSGSQDCTVKVWDL 462
Query: 472 DGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVT 531
+ AE M +KA++ AH KD+NS+ V+PND L+ +GSQDRTA +W L DL +
Sbjct: 463 PETTG-AEGVMMMKARSTERAHEKDVNSVCVSPNDKLLASGSQDRTAKLWALSDLRLLGV 521
Query: 532 FRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGA 591
RGH+RG+WSV+FSPVDQ++ +AS D +++IWSI D SCLKTFEGH +SVL+ F++RG
Sbjct: 522 CRGHRRGVWSVQFSPVDQILGSASADGSVRIWSIQDFSCLKTFEGHDASVLKIIFVSRGT 581
Query: 592 QIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLWHD 649
Q+VS G+DGLVKLWT++T EC+ T D H+DK+WAL G + E+ TG +D+ + +W D
Sbjct: 582 QLVSSGSDGLVKLWTIKTNECVRTLDAHQDKVWALHGGCRDELMVTGSADSTITVWTD 639
Score = 159 (61.0 bits), Expect = 1.0e-07, P = 1.0e-07
Identities = 35/136 (25%), Positives = 65/136 (47%)
Query: 47 LSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAI 106
LS+ + G + ++ SP D++L S+ +R+W + CL++++GHD +
Sbjct: 513 LSDLRLLGVCRGHRRGVWSVQFSPVDQILGSASADGSVRIWSIQDFSCLKTFEGHDASVL 572
Query: 107 GMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSD 166
+ G L ++G+D V +W + C H+ V ++ H L+ +GS
Sbjct: 573 KIIFVSRGTQLVSSGSDGLVKLWTIKTNECVRTLDAHQDKVWAL--HGGCRDELMVTGSA 630
Query: 167 DATVRVW-DLLAKKCV 181
D+T+ VW D L K +
Sbjct: 631 DSTITVWTDKLRKTVI 646
>UNIPROTKB|F1Q065 [details] [associations]
symbol:TBL3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005730 "nucleolus" evidence=IEA] [GO:0032040
"small-subunit processome" evidence=IEA] [GO:0006364 "rRNA
processing" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR013934 InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006364
GO:GO:0032040 OMA:HHFRGSP GeneTree:ENSGT00690000102183
EMBL:AAEX03004635 Ensembl:ENSCAFT00000030902 Uniprot:F1Q065
Length = 803
Score = 889 (318.0 bits), Expect = 6.2e-142, Sum P(2) = 6.2e-142
Identities = 188/458 (41%), Positives = 277/458 (60%)
Query: 261 RSLEIHFITVGERGIVRMWNADSA-CLYEQKSSDVTISFEMDDSKRGFTAATVLPSNQGL 319
+S +HF+T G++G++R+W A S C+Y Q + ++G T T+ S L
Sbjct: 253 KSKGLHFLTAGDQGLLRVWEAASGQCVYAQP--------QPPGPRQGLTHCTLAQSAGLL 304
Query: 320 LCVTADQQLLLYTTVEVPEKKMELILSKRLVGYNEEILDLKFLGEEEQYLAVATNIEQVQ 379
L VT D LLLY + L L K+ GY+EE+LD++FLG E+ ++ VA+N ++
Sbjct: 305 LSVTTDHNLLLY-------EARSLQLQKQFAGYSEEVLDVRFLGPEDSHIVVASNSPSLK 357
Query: 380 VYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLW--DSESR-CCVGV 436
V++L +M+C +L GH++IVL LD G+ L + +KD S+ +W + R CV
Sbjct: 358 VFELQTMTCQ-ILHGHTDIVLALDV--FRKGR-LFASCAKDQSICIWRMNKAGRVACVAQ 413
Query: 437 GTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFD------GLSDDAEQPMNLKAKAVV 490
G+GH +VG + S+ + FLV+GS D T+K+W G + D+ P+ L+A+A
Sbjct: 414 GSGHTHSVGTICCSRLKETFLVTGSQDCTVKLWPIPEALLSKGTAPDSG-PILLQAQATQ 472
Query: 491 AAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQV 550
H KDINS+AVAPND L+ TGSQDRTA +W LP + F GH+RG+W V+FSP+DQV
Sbjct: 473 RCHDKDINSVAVAPNDKLLATGSQDRTAKLWALPHCQLLGIFSGHRRGLWCVQFSPMDQV 532
Query: 551 VITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVS--CGADGLVKLWTVR 608
+ TAS D TIK+W++ D SCLKTFEGH +SVL+ F++RG Q++S G+DGLVKLWT++
Sbjct: 533 LATASADGTIKLWALQDFSCLKTFEGHDASVLKVVFVSRGTQLLSRPSGSDGLVKLWTIK 592
Query: 609 TGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLWHDSTXXXXXXXXXXXXXXVLR 668
EC+ T D HEDK+W L + + TG SD+ V LW D T V++
Sbjct: 593 NNECVKTLDAHEDKVWGLHCSRLDDRALTGASDSCVILWKDVTEEEQSEEQARREEEVVK 652
Query: 669 GQELENAVLDADYTKAIQVAFELRRPHKLFELFASVCR 706
QEL+N + + Y +A+ +A L RPH + + ++ R
Sbjct: 653 QQELDNLLYEKRYLRALGLAISLDRPHTVLTVIQAIRR 690
Score = 520 (188.1 bits), Expect = 6.2e-142, Sum P(2) = 6.2e-142
Identities = 105/286 (36%), Positives = 163/286 (56%)
Query: 7 KKSYGCEPVLQQFYGGGPLVVSSDGSFIACACGESINIVDL-SNASIKSTIEGGSDTITA 65
K +Y E ++ FY GG + + G + C CG +N++D+ S A ++S + + ITA
Sbjct: 9 KANYAVERKMEPFYKGGKVQLDQTGQHVFCVCGTKVNVLDVASGAVLRSLEQEDQEDITA 68
Query: 66 LALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKG-HDGPAIGMACHPSGGLLATAGADR 124
LSPDD++L ++ + + W R WK H P MA P+ LLAT G D
Sbjct: 69 FELSPDDQVLVTATRALLLAQWAWREGSITRLWKAIHTAPVATMAFDPTSTLLATGGCDG 128
Query: 125 KVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATL 184
V VWD+ + TH+F+G GVV + FHPD + LLFS + DAT+R+W L + C+A +
Sbjct: 129 AVRVWDIVRHYGTHHFRGSPGVVHLVTFHPDPARLLLFSSAADATIRMWSLQDQSCLAVM 188
Query: 185 DKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYEMVEAVCAIPPGSAF 244
H+S VTS+ ++DG T++S+GRDK+ +WDL+ + TVP +E VEA +P
Sbjct: 189 TAHYSAVTSLTFSADGHTMLSSGRDKICVIWDLQSHQATRTVPVFESVEAAVLLP----- 243
Query: 245 DSFLSSYNQQTIKKKRRSLEIHFITVGERGIVRMWNADSA-CLYEQ 289
+ + + +K K +HF+T G++G++R+W A S C+Y Q
Sbjct: 244 EELVPKLD---VKSKG----LHFLTAGDQGLLRVWEAASGQCVYAQ 282
Score = 180 (68.4 bits), Expect = 4.7e-10, P = 4.7e-10
Identities = 42/153 (27%), Positives = 70/153 (45%)
Query: 63 ITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGA 122
I ++A++P+DKLL + R ++W L + L + GH + P +LATA A
Sbjct: 479 INSVAVAPNDKLLATGSQDRTAKLWALPHCQLLGIFSGHRRGLWCVQFSPMDQVLATASA 538
Query: 123 DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVA 182
D + +W + C F+GH V ++F + L D V++W + +CV
Sbjct: 539 DGTIKLWALQDFSCLKTFEGHDASVLKVVFVSRGTQLLSRPSGSDGLVKLWTIKNNECVK 598
Query: 183 TLDKHFSRVTSMAITSDGSTLISAGRDKVVNLW 215
TLD H +V + + ++ D V LW
Sbjct: 599 TLDAHEDKVWGLHCSRLDDRALTGASDSCVILW 631
Score = 166 (63.5 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 55/203 (27%), Positives = 94/203 (46%)
Query: 34 IACACGESINIVDLSNASIKST-IEGGSDTITALALSPDDKLLFSSG---HSREIRVWDL 89
+A G + ++ + + +K T + GS T + L P + L S G S I +
Sbjct: 411 VAQGSGHTHSVGTICCSRLKETFLVTGSQDCT-VKLWPIPEALLSKGTAPDSGPILLQAQ 469
Query: 90 STLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSS 149
+T +C HD +A P+ LLAT DR +W + F GH+ +
Sbjct: 470 ATQRC------HDKDINSVAVAPNDKLLATGSQDRTAKLWALPHCQLLGIFSGHRRGLWC 523
Query: 150 ILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLIS--AG 207
+ F P D+ +L + S D T+++W L C+ T + H + V + S G+ L+S +G
Sbjct: 524 VQFSP-MDQ-VLATASADGTIKLWALQDFSCLKTFEGHDASVLKVVFVSRGTQLLSRPSG 581
Query: 208 RDKVVNLWDLRDYSCKLTVPTYE 230
D +V LW +++ C T+ +E
Sbjct: 582 SDGLVKLWTIKNNECVKTLDAHE 604
Score = 166 (63.5 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 60/278 (21%), Positives = 106/278 (38%)
Query: 378 VQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVG 437
++++ L SC V+ H V L A G ++ +G +D +WD +S
Sbjct: 174 IRMWSLQDQSCLAVMTAHYSAVTSLTFSA--DGHTMLSSG-RDKICVIWDLQSHQATRTV 230
Query: 438 TGHMGAVGAVAFSKKLQNFL-VSGSSDHTIKVWSFDGLSD--DAEQPMNLKAKAVVAAHG 494
AV ++L L V H + GL +A + A+
Sbjct: 231 PVFESVEAAVLLPEELVPKLDVKSKGLHFLTAGD-QGLLRVWEAASGQCVYAQPQPPGPR 289
Query: 495 KDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEF-SPVDQVVIT 553
+ + +A + L+ + + D ++ L F G+ + V F P D ++
Sbjct: 290 QGLTHCTLAQSAGLLLSVTTDHNLLLYEARSLQLQKQFAGYSEEVLDVRFLGPEDSHIVV 349
Query: 554 ASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTV-RTGE- 611
AS ++K++ + +C + GHT VL +G SC D + +W + + G
Sbjct: 350 ASNSPSLKVFELQTMTC-QILHGHTDIVLALDVFRKGRLFASCAKDQSICIWRMNKAGRV 408
Query: 612 -CIATYDKHEDKIWALAVGKKTEMF-ATGGSDALVNLW 647
C+A H + + + E F TG D V LW
Sbjct: 409 ACVAQGSGHTHSVGTICCSRLKETFLVTGSQDCTVKLW 446
Score = 160 (61.4 bits), Expect = 6.8e-08, P = 6.8e-08
Identities = 44/169 (26%), Positives = 75/169 (44%)
Query: 491 AAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEF--SPVD 548
A H + ++A P +L+ TG D VW + FRG + V F P
Sbjct: 103 AIHTAPVATMAFDPTSTLLATGGCDGAVRVWDIVRHYGTHHFRGSPGVVHLVTFHPDPAR 162
Query: 549 QVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVR 608
++ +++ D TI++WS+ D SCL H S+V +F G ++S G D + +W ++
Sbjct: 163 LLLFSSAADATIRMWSLQDQSCLAVMTAHYSAVTSLTFSADGHTMLSSGRDKICVIWDLQ 222
Query: 609 TGECIAT---YDK-------HEDKIWALAVGKKTEMFATGGSDALVNLW 647
+ + T ++ E+ + L V K F T G L+ +W
Sbjct: 223 SHQATRTVPVFESVEAAVLLPEELVPKLDVKSKGLHFLTAGDQGLLRVW 271
Score = 137 (53.3 bits), Expect = 1.8e-101, Sum P(2) = 1.8e-101
Identities = 42/177 (23%), Positives = 71/177 (40%)
Query: 63 ITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPSGG--LLATA 120
+ +A P LL + G +RVWD+ ++G G + HP LL ++
Sbjct: 109 VATMAFDPTSTLLATGGCDGAVRVWDIVRHYGTHHFRGSPGVVHLVTFHPDPARLLLFSS 168
Query: 121 GADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKC 180
AD + +W + C H V+S+ F D ++L SG D V +WDL + +
Sbjct: 169 AADATIRMWSLQDQSCLAVMTAHYSAVTSLTFSAD-GHTMLSSGRDKICV-IWDLQSHQA 226
Query: 181 VATLDKHFS----------RVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVP 227
T+ S V + + S G ++AG ++ +W+ C P
Sbjct: 227 TRTVPVFESVEAAVLLPEELVPKLDVKSKGLHFLTAGDQGLLRVWEAASGQCVYAQP 283
Score = 135 (52.6 bits), Expect = 3.5e-05, P = 3.5e-05
Identities = 45/211 (21%), Positives = 91/211 (43%)
Query: 26 VVSSDGSFIACACGESINIVDLSNASIKSTIEGGSDTITALA-LSPDDKLLFSSGHSREI 84
+ S G ++ ++ + + + ++ G S+ + + L P+D + + +S +
Sbjct: 297 LAQSAGLLLSVTTDHNLLLYEARSLQLQKQFAGYSEEVLDVRFLGPEDSHIVVASNSPSL 356
Query: 85 RVWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVD-GG--FCTHYFK 141
+V++L T+ C + GH + + G L A+ D+ + +W ++ G C
Sbjct: 357 KVFELQTMTC-QILHGHTDIVLALDVFRKGRLFASCAKDQSICIWRMNKAGRVACVAQGS 415
Query: 142 GHKGVVSSILFHPDTDKSLLFSGSDDATVRVWD----LLAK-----------KCVATLDK 186
GH V +I ++ L +GS D TV++W LL+K + AT
Sbjct: 416 GHTHSVGTICCSR-LKETFLVTGSQDCTVKLWPIPEALLSKGTAPDSGPILLQAQATQRC 474
Query: 187 HFSRVTSMAITSDGSTLISAGRDKVVNLWDL 217
H + S+A+ + L + +D+ LW L
Sbjct: 475 HDKDINSVAVAPNDKLLATGSQDRTAKLWAL 505
>UNIPROTKB|F1MNS4 [details] [associations]
symbol:TBL3 "Transducin beta-like protein 3" species:9913
"Bos taurus" [GO:0005730 "nucleolus" evidence=IEA] [GO:0032040
"small-subunit processome" evidence=IEA] [GO:0006364 "rRNA
processing" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR013934 InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006364
GO:GO:0032040 IPI:IPI00711976 UniGene:Bt.20483 OMA:HHFRGSP
GeneTree:ENSGT00690000102183 EMBL:DAAA02057306
ProteinModelPortal:F1MNS4 Ensembl:ENSBTAT00000027147 Uniprot:F1MNS4
Length = 800
Score = 885 (316.6 bits), Expect = 2.7e-141, Sum P(2) = 2.7e-141
Identities = 188/455 (41%), Positives = 274/455 (60%)
Query: 261 RSLEIHFITVGERGIVRMWNADSA-CLYEQKSSDVTISFEMDDSKRGFTAATVLPSNQGL 319
+S +HF+T G++G +R+W A S C++ Q+ + R T T+ + L
Sbjct: 256 KSAGLHFLTAGDQGALRVWEAASGRCVHAQQ--------RLRGPGRELTHCTLAHAAGLL 307
Query: 320 LCVTADQQLLLYTTVEVPEKKMELILSKRLVGYNEEILDLKFLGEEEQYLAVATNIEQVQ 379
L VTAD LLLY L L K+ GY+EE+LD++FLG E+ ++ VA+N ++
Sbjct: 308 LSVTADHNLLLYDA-------HSLRLRKQFAGYSEEVLDVRFLGPEDSHVVVASNSPCLK 360
Query: 380 VYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLW---DSESRCCVGV 436
V+DL + +C +L GH++IVL LD G+ L + +KD S+R+W S CV
Sbjct: 361 VFDLQTSACQ-ILHGHTDIVLALDV--FRKGR-LFASCAKDQSIRVWRMNKSGEVACVAQ 416
Query: 437 GTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDG--LSDDAEQ---PMNLKAKAVVA 491
G+GH +VG + S+ + FLV+GS D T+K+W LS P+ L+A+A
Sbjct: 417 GSGHTHSVGTICCSRLKETFLVTGSQDCTVKLWPLPEALLSKGTGHEGGPVFLQAQATQR 476
Query: 492 AHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVV 551
H KDINS+AVAPND L+ TGSQDRTA +W LP + TF GH+RG+W V+FSP+DQV+
Sbjct: 477 CHDKDINSVAVAPNDKLLATGSQDRTAKLWALPRCQLLGTFSGHRRGLWCVQFSPMDQVL 536
Query: 552 ITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGE 611
TAS D TIK+W++ D SCLKTFEGH +SVL+ +F++RG Q++S G+DGL+KLWT++ E
Sbjct: 537 ATASADGTIKLWALQDFSCLKTFEGHDASVLKVAFVSRGTQLLSSGSDGLLKLWTIKNNE 596
Query: 612 CIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLWHDSTXXXXXXXXXXXXXXVLRGQE 671
C+ T D HEDK+W L + + TG SD+ V LW D T V++ QE
Sbjct: 597 CVRTLDAHEDKVWGLHCSRLDDRALTGASDSRVVLWKDVTEAEQAEEQAKREEQVVKQQE 656
Query: 672 LENAVLDADYTKAIQVAFELRRPHKLFELFASVCR 706
L+N + + Y +A+ +A L RPH + + ++ R
Sbjct: 657 LDNLLHEKRYLRALGLAISLDRPHTVLTVIQAIRR 691
Score = 518 (187.4 bits), Expect = 2.7e-141, Sum P(2) = 2.7e-141
Identities = 109/287 (37%), Positives = 160/287 (55%)
Query: 7 KKSYGCEPVLQQFYGGGPLVVSSDGSFIACACGESINIVDL-SNASIKSTIEGGSDTITA 65
K +Y E ++ FY GG + + G + C CG +NI+D+ S A ++S + + ITA
Sbjct: 12 KSNYAVERKIEPFYKGGKVQLDQTGQHLFCVCGTRVNILDVASGAVLRSLEQEDQEDITA 71
Query: 66 LALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKG-HDGPAIGMACHPSGGLLATAGADR 124
LSPDDK+L ++ + + W R WK H P MA P+ LLAT G D
Sbjct: 72 FDLSPDDKVLVTASRALLLAQWAWQEGSVTRLWKAIHTAPVATMAFDPTSTLLATGGCDG 131
Query: 125 KVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATL 184
V VWDV + TH+F+G GVV + FHPD + LLFS + D ++RVW L + C+A L
Sbjct: 132 AVRVWDVVRCYGTHHFRGSPGVVHLVAFHPDPARLLLFSSAADTSIRVWSLQERSCLAVL 191
Query: 185 DKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYEMVEAVCAIPPGSAF 244
H+S VTS+ ++DG T++S+GRDK+ +WDLR TVP +E VEA +P A
Sbjct: 192 TAHYSAVTSLTFSADGHTMLSSGRDKICVIWDLRSLQATRTVPVFESVEAAVLLPEEPA- 250
Query: 245 DSFLSSYNQQTIKKKRRSLEIHFITVGERGIVRMWNADSA-CLYEQK 290
+ +K S +HF+T G++G +R+W A S C++ Q+
Sbjct: 251 -------PELGVK----SAGLHFLTAGDQGALRVWEAASGRCVHAQQ 286
Score = 188 (71.2 bits), Expect = 6.3e-11, P = 6.3e-11
Identities = 48/154 (31%), Positives = 75/154 (48%)
Query: 63 ITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGA 122
I ++A++P+DKLL + R ++W L + L ++ GH + P +LATA A
Sbjct: 482 INSVAVAPNDKLLATGSQDRTAKLWALPRCQLLGTFSGHRRGLWCVQFSPMDQVLATASA 541
Query: 123 DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVA 182
D + +W + C F+GH V + F LL SGSD +++W + +CV
Sbjct: 542 DGTIKLWALQDFSCLKTFEGHDASVLKVAF-VSRGTQLLSSGSD-GLLKLWTIKNNECVR 599
Query: 183 TLDKHFSRVTSMAITS-DGSTLISAGRDKVVNLW 215
TLD H +V + + D L A +VV LW
Sbjct: 600 TLDAHEDKVWGLHCSRLDDRALTGASDSRVV-LW 632
Score = 182 (69.1 bits), Expect = 2.8e-10, P = 2.8e-10
Identities = 53/206 (25%), Positives = 96/206 (46%)
Query: 28 SSDGSFIACACGESINIVDLSNASIKST--IEGGSDTITALALSPDDKLLFSSGHSR-EI 84
S + + +A G + ++ + + +K T + G D L P+ L +GH +
Sbjct: 408 SGEVACVAQGSGHTHSVGTICCSRLKETFLVTGSQDCTVKLWPLPEALLSKGTGHEGGPV 467
Query: 85 RVWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHK 144
+ +T +C HD +A P+ LLAT DR +W + F GH+
Sbjct: 468 FLQAQATQRC------HDKDINSVAVAPNDKLLATGSQDRTAKLWALPRCQLLGTFSGHR 521
Query: 145 GVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLI 204
+ + F P D+ +L + S D T+++W L C+ T + H + V +A S G+ L+
Sbjct: 522 RGLWCVQFSP-MDQ-VLATASADGTIKLWALQDFSCLKTFEGHDASVLKVAFVSRGTQLL 579
Query: 205 SAGRDKVVNLWDLRDYSCKLTVPTYE 230
S+G D ++ LW +++ C T+ +E
Sbjct: 580 SSGSDGLLKLWTIKNNECVRTLDAHE 605
Score = 180 (68.4 bits), Expect = 4.6e-10, P = 4.6e-10
Identities = 63/277 (22%), Positives = 108/277 (38%)
Query: 378 VQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVG 437
++V+ L SC VL H V L A G ++ +G +D +WD S
Sbjct: 177 IRVWSLQERSCLAVLTAHYSAVTSLTFSA--DGHTMLSSG-RDKICVIWDLRSLQATRTV 233
Query: 438 TGHMGAVGAVAFSKKLQNFL-VSGSSDHTIKVWSFDGLSD-DAEQPMNLKAKAVVAAHGK 495
AV ++ L V + H + L +A + A+ + G+
Sbjct: 234 PVFESVEAAVLLPEEPAPELGVKSAGLHFLTAGDQGALRVWEAASGRCVHAQQRLRGPGR 293
Query: 496 DINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEF-SPVDQVVITA 554
++ +A L+ + + D ++ L F G+ + V F P D V+ A
Sbjct: 294 ELTHCTLAHAAGLLLSVTADHNLLLYDAHSLRLRKQFAGYSEEVLDVRFLGPEDSHVVVA 353
Query: 555 SGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTV-RTGE-- 611
S +K++ + +C + GHT VL +G SC D +++W + ++GE
Sbjct: 354 SNSPCLKVFDLQTSAC-QILHGHTDIVLALDVFRKGRLFASCAKDQSIRVWRMNKSGEVA 412
Query: 612 CIATYDKHEDKIWALAVGKKTEMF-ATGGSDALVNLW 647
C+A H + + + E F TG D V LW
Sbjct: 413 CVAQGSGHTHSVGTICCSRLKETFLVTGSQDCTVKLW 449
Score = 171 (65.3 bits), Expect = 4.4e-09, P = 4.4e-09
Identities = 53/241 (21%), Positives = 96/241 (39%)
Query: 411 KILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWS 470
++L+ + + D S+R+W + R C+ V T H AV ++ FS L SG D +W
Sbjct: 165 RLLLFSSAADTSIRVWSLQERSCLAVLTAHYSAVTSLTFSADGHTMLSSGR-DKICVIWD 223
Query: 471 FDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPD---LV 527
L P+ +A V + L V T VW +
Sbjct: 224 LRSLQATRTVPVFESVEAAVLLPEEPAPELGVKSAGLHFLTAGDQGALRVWEAASGRCVH 283
Query: 528 SVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFL 587
+ RG R + + ++++ + D + ++ K F G++ VL FL
Sbjct: 284 AQQRLRGPGRELTHCTLAHAAGLLLSVTADHNLLLYDAHSLRLRKQFAGYSEEVLDVRFL 343
Query: 588 -TRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNL 646
+ +V +K++ ++T C + H D + AL V +K +FA+ D + +
Sbjct: 344 GPEDSHVVVASNSPCLKVFDLQTSACQILHG-HTDIVLALDVFRKGRLFASCAKDQSIRV 402
Query: 647 W 647
W
Sbjct: 403 W 403
Score = 150 (57.9 bits), Expect = 8.2e-07, P = 8.2e-07
Identities = 34/127 (26%), Positives = 60/127 (47%)
Query: 491 AAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEF--SPVD 548
A H + ++A P +L+ TG D VW + FRG + V F P
Sbjct: 106 AIHTAPVATMAFDPTSTLLATGGCDGAVRVWDVVRCYGTHHFRGSPGVVHLVAFHPDPAR 165
Query: 549 QVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVR 608
++ +++ D +I++WS+ + SCL H S+V +F G ++S G D + +W +R
Sbjct: 166 LLLFSSAADTSIRVWSLQERSCLAVLTAHYSAVTSLTFSADGHTMLSSGRDKICVIWDLR 225
Query: 609 TGECIAT 615
+ + T
Sbjct: 226 SLQATRT 232
Score = 132 (51.5 bits), Expect = 7.2e-05, P = 7.2e-05
Identities = 30/127 (23%), Positives = 59/127 (46%)
Query: 47 LSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAI 106
L + T G + + SP D++L ++ I++W L CL++++GHD +
Sbjct: 508 LPRCQLLGTFSGHRRGLWCVQFSPMDQVLATASADGTIKLWALQDFSCLKTFEGHDASVL 567
Query: 107 GMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSD 166
+A G L ++G+D + +W + C H+ V + D++L +G+
Sbjct: 568 KVAFVSRGTQLLSSGSDGLLKLWTIKNNECVRTLDAHEDKVWGLHCSRLDDRAL--TGAS 625
Query: 167 DATVRVW 173
D+ V +W
Sbjct: 626 DSRVVLW 632
Score = 126 (49.4 bits), Expect = 0.00032, P = 0.00032
Identities = 58/242 (23%), Positives = 96/242 (39%)
Query: 404 TCALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHM----GAVGAVAFSKKLQNFLV- 458
T A L+ TG D +VR+WD RC GT H G V VAF L+
Sbjct: 114 TMAFDPTSTLLATGGCDGAVRVWDVV-RC---YGTHHFRGSPGVVHLVAFHPDPARLLLF 169
Query: 459 SGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTA 518
S ++D +I+VWS S AV+ AH + SL + + + + +D+
Sbjct: 170 SSAADTSIRVWSLQERS----------CLAVLTAHYSAVTSLTFSADGHTMLSSGRDKIC 219
Query: 519 CVWRLPDLVSVVT---FRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFE 575
+W L L + T F + + E P ++ + ++G + + D L+ +E
Sbjct: 220 VIWDLRSLQATRTVPVFESVEAAVLLPE-EPAPELGVKSAG---LHFLTAGDQGALRVWE 275
Query: 576 GHTSSVLRASFLTRGA--QIVSCG-ADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKT 632
+ + A RG ++ C A L +V + YD H ++ G
Sbjct: 276 AASGRCVHAQQRLRGPGRELTHCTLAHAAGLLLSVTADHNLLLYDAHSLRLRKQFAGYSE 335
Query: 633 EM 634
E+
Sbjct: 336 EV 337
>UNIPROTKB|Q2KJJ5 [details] [associations]
symbol:TBL3 "Transducin beta-like protein 3" species:9913
"Bos taurus" [GO:0005730 "nucleolus" evidence=IEA] [GO:0032040
"small-subunit processome" evidence=IEA] [GO:0006364 "rRNA
processing" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR013934 InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006364 GO:GO:0032040 HSSP:P63005 EMBL:BC105313
IPI:IPI00711976 RefSeq:NP_001040084.2 UniGene:Bt.20483
ProteinModelPortal:Q2KJJ5 STRING:Q2KJJ5 PRIDE:Q2KJJ5 GeneID:618429
KEGG:bta:618429 CTD:10607 HOGENOM:HOG000188765 HOVERGEN:HBG058869
InParanoid:Q2KJJ5 KO:K14555 OrthoDB:EOG42JNQR NextBio:20901180
Uniprot:Q2KJJ5
Length = 800
Score = 885 (316.6 bits), Expect = 2.7e-141, Sum P(2) = 2.7e-141
Identities = 188/455 (41%), Positives = 274/455 (60%)
Query: 261 RSLEIHFITVGERGIVRMWNADSA-CLYEQKSSDVTISFEMDDSKRGFTAATVLPSNQGL 319
+S +HF+T G++G +R+W A S C++ Q+ + R T T+ + L
Sbjct: 256 KSAGLHFLTAGDQGALRVWEAASGRCVHAQQ--------RLRGPGRELTHCTLAHAAGLL 307
Query: 320 LCVTADQQLLLYTTVEVPEKKMELILSKRLVGYNEEILDLKFLGEEEQYLAVATNIEQVQ 379
L VTAD LLLY L L K+ GY+EE+LD++FLG E+ ++ VA+N ++
Sbjct: 308 LSVTADHNLLLYDA-------RSLRLRKQFAGYSEEVLDVRFLGPEDSHVVVASNSPCLK 360
Query: 380 VYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLW---DSESRCCVGV 436
V+DL + +C +L GH++IVL LD G+ L + +KD S+R+W S CV
Sbjct: 361 VFDLQTSACQ-ILHGHTDIVLALDV--FRKGR-LFASCAKDQSIRVWRMNKSGEVACVAQ 416
Query: 437 GTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDG--LSDDAEQ---PMNLKAKAVVA 491
G+GH +VG + S+ + FLV+GS D T+K+W LS P+ L+A+A
Sbjct: 417 GSGHTHSVGTICCSRLKETFLVTGSQDCTVKLWPLPEALLSKGTGHEGGPVFLQAQATQH 476
Query: 492 AHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVV 551
H KDINS+AVAPND L+ TGSQDRTA +W LP + TF GH+RG+W V+FSP+DQV+
Sbjct: 477 CHDKDINSVAVAPNDKLLATGSQDRTAKLWALPRCQLLGTFSGHRRGLWCVQFSPMDQVL 536
Query: 552 ITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGE 611
TAS D TIK+W++ D SCLKTFEGH +SVL+ +F++RG Q++S G+DGL+KLWT++ E
Sbjct: 537 ATASADGTIKLWALQDFSCLKTFEGHDASVLKVAFVSRGTQLLSSGSDGLLKLWTIKNNE 596
Query: 612 CIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLWHDSTXXXXXXXXXXXXXXVLRGQE 671
C+ T D HEDK+W L + + TG SD+ V LW D T V++ QE
Sbjct: 597 CVRTLDAHEDKVWGLHCSRLDDRALTGASDSRVVLWKDVTEAEQAEEQAKREEQVVKQQE 656
Query: 672 LENAVLDADYTKAIQVAFELRRPHKLFELFASVCR 706
L+N + + Y +A+ +A L RPH + + ++ R
Sbjct: 657 LDNLLHEKRYLRALGLAISLDRPHTVLTVIQAIRR 691
Score = 518 (187.4 bits), Expect = 2.7e-141, Sum P(2) = 2.7e-141
Identities = 109/287 (37%), Positives = 160/287 (55%)
Query: 7 KKSYGCEPVLQQFYGGGPLVVSSDGSFIACACGESINIVDL-SNASIKSTIEGGSDTITA 65
K +Y E ++ FY GG + + G + C CG +NI+D+ S A ++S + + ITA
Sbjct: 12 KSNYAVERKIEPFYKGGKVQLDQTGQHLFCVCGTRVNILDVASGAVLRSLEQEDQEDITA 71
Query: 66 LALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKG-HDGPAIGMACHPSGGLLATAGADR 124
LSPDDK+L ++ + + W R WK H P MA P+ LLAT G D
Sbjct: 72 FDLSPDDKVLVTASRALLLAQWAWQEGSVTRLWKAIHTAPVATMAFDPTSTLLATGGCDG 131
Query: 125 KVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATL 184
V VWDV + TH+F+G GVV + FHPD + LLFS + D ++RVW L + C+A L
Sbjct: 132 AVRVWDVVRCYGTHHFRGSPGVVHLVAFHPDPARLLLFSSAADTSIRVWSLQERSCLAVL 191
Query: 185 DKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYEMVEAVCAIPPGSAF 244
H+S VTS+ ++DG T++S+GRDK+ +WDLR TVP +E VEA +P A
Sbjct: 192 TAHYSAVTSLTFSADGHTMLSSGRDKICVIWDLRSLQATRTVPVFESVEAAVLLPEEPA- 250
Query: 245 DSFLSSYNQQTIKKKRRSLEIHFITVGERGIVRMWNADSA-CLYEQK 290
+ +K S +HF+T G++G +R+W A S C++ Q+
Sbjct: 251 -------PELGVK----SAGLHFLTAGDQGALRVWEAASGRCVHAQQ 286
Score = 188 (71.2 bits), Expect = 6.3e-11, P = 6.3e-11
Identities = 48/154 (31%), Positives = 75/154 (48%)
Query: 63 ITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGA 122
I ++A++P+DKLL + R ++W L + L ++ GH + P +LATA A
Sbjct: 482 INSVAVAPNDKLLATGSQDRTAKLWALPRCQLLGTFSGHRRGLWCVQFSPMDQVLATASA 541
Query: 123 DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVA 182
D + +W + C F+GH V + F LL SGSD +++W + +CV
Sbjct: 542 DGTIKLWALQDFSCLKTFEGHDASVLKVAF-VSRGTQLLSSGSD-GLLKLWTIKNNECVR 599
Query: 183 TLDKHFSRVTSMAITS-DGSTLISAGRDKVVNLW 215
TLD H +V + + D L A +VV LW
Sbjct: 600 TLDAHEDKVWGLHCSRLDDRALTGASDSRVV-LW 632
Score = 180 (68.4 bits), Expect = 4.6e-10, P = 4.6e-10
Identities = 63/277 (22%), Positives = 108/277 (38%)
Query: 378 VQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVG 437
++V+ L SC VL H V L A G ++ +G +D +WD S
Sbjct: 177 IRVWSLQERSCLAVLTAHYSAVTSLTFSA--DGHTMLSSG-RDKICVIWDLRSLQATRTV 233
Query: 438 TGHMGAVGAVAFSKKLQNFL-VSGSSDHTIKVWSFDGLSD-DAEQPMNLKAKAVVAAHGK 495
AV ++ L V + H + L +A + A+ + G+
Sbjct: 234 PVFESVEAAVLLPEEPAPELGVKSAGLHFLTAGDQGALRVWEAASGRCVHAQQRLRGPGR 293
Query: 496 DINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEF-SPVDQVVITA 554
++ +A L+ + + D ++ L F G+ + V F P D V+ A
Sbjct: 294 ELTHCTLAHAAGLLLSVTADHNLLLYDARSLRLRKQFAGYSEEVLDVRFLGPEDSHVVVA 353
Query: 555 SGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTV-RTGE-- 611
S +K++ + +C + GHT VL +G SC D +++W + ++GE
Sbjct: 354 SNSPCLKVFDLQTSAC-QILHGHTDIVLALDVFRKGRLFASCAKDQSIRVWRMNKSGEVA 412
Query: 612 CIATYDKHEDKIWALAVGKKTEMF-ATGGSDALVNLW 647
C+A H + + + E F TG D V LW
Sbjct: 413 CVAQGSGHTHSVGTICCSRLKETFLVTGSQDCTVKLW 449
Score = 179 (68.1 bits), Expect = 6.0e-10, P = 6.0e-10
Identities = 53/206 (25%), Positives = 95/206 (46%)
Query: 28 SSDGSFIACACGESINIVDLSNASIKST--IEGGSDTITALALSPDDKLLFSSGHSR-EI 84
S + + +A G + ++ + + +K T + G D L P+ L +GH +
Sbjct: 408 SGEVACVAQGSGHTHSVGTICCSRLKETFLVTGSQDCTVKLWPLPEALLSKGTGHEGGPV 467
Query: 85 RVWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHK 144
+ +T C HD +A P+ LLAT DR +W + F GH+
Sbjct: 468 FLQAQATQHC------HDKDINSVAVAPNDKLLATGSQDRTAKLWALPRCQLLGTFSGHR 521
Query: 145 GVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLI 204
+ + F P D+ +L + S D T+++W L C+ T + H + V +A S G+ L+
Sbjct: 522 RGLWCVQFSP-MDQ-VLATASADGTIKLWALQDFSCLKTFEGHDASVLKVAFVSRGTQLL 579
Query: 205 SAGRDKVVNLWDLRDYSCKLTVPTYE 230
S+G D ++ LW +++ C T+ +E
Sbjct: 580 SSGSDGLLKLWTIKNNECVRTLDAHE 605
Score = 171 (65.3 bits), Expect = 4.4e-09, P = 4.4e-09
Identities = 53/241 (21%), Positives = 96/241 (39%)
Query: 411 KILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWS 470
++L+ + + D S+R+W + R C+ V T H AV ++ FS L SG D +W
Sbjct: 165 RLLLFSSAADTSIRVWSLQERSCLAVLTAHYSAVTSLTFSADGHTMLSSGR-DKICVIWD 223
Query: 471 FDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPD---LV 527
L P+ +A V + L V T VW +
Sbjct: 224 LRSLQATRTVPVFESVEAAVLLPEEPAPELGVKSAGLHFLTAGDQGALRVWEAASGRCVH 283
Query: 528 SVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFL 587
+ RG R + + ++++ + D + ++ K F G++ VL FL
Sbjct: 284 AQQRLRGPGRELTHCTLAHAAGLLLSVTADHNLLLYDARSLRLRKQFAGYSEEVLDVRFL 343
Query: 588 -TRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNL 646
+ +V +K++ ++T C + H D + AL V +K +FA+ D + +
Sbjct: 344 GPEDSHVVVASNSPCLKVFDLQTSACQILHG-HTDIVLALDVFRKGRLFASCAKDQSIRV 402
Query: 647 W 647
W
Sbjct: 403 W 403
Score = 150 (57.9 bits), Expect = 8.2e-07, P = 8.2e-07
Identities = 34/127 (26%), Positives = 60/127 (47%)
Query: 491 AAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEF--SPVD 548
A H + ++A P +L+ TG D VW + FRG + V F P
Sbjct: 106 AIHTAPVATMAFDPTSTLLATGGCDGAVRVWDVVRCYGTHHFRGSPGVVHLVAFHPDPAR 165
Query: 549 QVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVR 608
++ +++ D +I++WS+ + SCL H S+V +F G ++S G D + +W +R
Sbjct: 166 LLLFSSAADTSIRVWSLQERSCLAVLTAHYSAVTSLTFSADGHTMLSSGRDKICVIWDLR 225
Query: 609 TGECIAT 615
+ + T
Sbjct: 226 SLQATRT 232
Score = 132 (51.5 bits), Expect = 7.2e-05, P = 7.2e-05
Identities = 30/127 (23%), Positives = 59/127 (46%)
Query: 47 LSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAI 106
L + T G + + SP D++L ++ I++W L CL++++GHD +
Sbjct: 508 LPRCQLLGTFSGHRRGLWCVQFSPMDQVLATASADGTIKLWALQDFSCLKTFEGHDASVL 567
Query: 107 GMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSD 166
+A G L ++G+D + +W + C H+ V + D++L +G+
Sbjct: 568 KVAFVSRGTQLLSSGSDGLLKLWTIKNNECVRTLDAHEDKVWGLHCSRLDDRAL--TGAS 625
Query: 167 DATVRVW 173
D+ V +W
Sbjct: 626 DSRVVLW 632
>RGD|1305142 [details] [associations]
symbol:Tbl3 "transducin (beta)-like 3" species:10116 "Rattus
norvegicus" [GO:0005634 "nucleus" evidence=ISO] [GO:0005730
"nucleolus" evidence=IEA;ISO] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0032040 "small-subunit processome" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR013934
InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 RGD:1305142 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006364 GO:GO:0032040 HSSP:P63005 CTD:10607
HOGENOM:HOG000188765 HOVERGEN:HBG058869 KO:K14555 OrthoDB:EOG42JNQR
GeneTree:ENSGT00690000102183 EMBL:BC085837 IPI:IPI00369236
RefSeq:NP_001008278.1 UniGene:Rn.32013 ProteinModelPortal:Q5U2W5
STRING:Q5U2W5 PRIDE:Q5U2W5 Ensembl:ENSRNOT00000018405 GeneID:287120
KEGG:rno:287120 UCSC:RGD:1305142 InParanoid:Q5U2W5 NextBio:625544
Genevestigator:Q5U2W5 Uniprot:Q5U2W5
Length = 800
Score = 888 (317.7 bits), Expect = 4.4e-141, Sum P(2) = 4.4e-141
Identities = 184/452 (40%), Positives = 278/452 (61%)
Query: 265 IHFITVGERGIVRMWNADSA-CLYEQKSSDVTISFEMDDSKRGFTAATVLPSNQGLLCVT 323
+HF+T G++GI+R+W A S C+Y Q +M ++ T T+ + LL VT
Sbjct: 260 LHFLTAGDQGILRVWEAASGQCVYTQP--------QMSGLRQELTHCTLARAAGLLLTVT 311
Query: 324 ADQQLLLYTTVEVPEKKMELILSKRLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDL 383
AD LLLY + L L K+ GY+EE+LD++FLG + ++ VA+N ++V++L
Sbjct: 312 ADHNLLLY-------EARSLQLQKQFAGYSEEVLDVRFLGPNDSHIIVASNSPCLKVFEL 364
Query: 384 SSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESR---CCVGVGTGH 440
+++C +L GH++IVL LD G L + +KD S+R+W CV G+GH
Sbjct: 365 QTLACQ-ILHGHTDIVLALDV--FRKGW-LFASCAKDQSIRIWRMNKAGQVACVAQGSGH 420
Query: 441 MGAVGAVAFSKKLQNFLVSGSSDHTIKVWSF-DGL-----SDDAEQPMNLKAKAVVAAHG 494
+VG + S+ ++FLV+GS D T+K+W + L + D + + L+A++ H
Sbjct: 421 THSVGTICCSRLKESFLVTGSQDCTVKLWPLPEALPSKNTASDGDL-IPLQAQSTQRCHD 479
Query: 495 KDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITA 554
KDINSLAV+PND L+ TGSQDRTA +W LP + F GH+RG+W+V+FSP DQV+ TA
Sbjct: 480 KDINSLAVSPNDKLLATGSQDRTAKLWALPQCQLLGVFSGHRRGLWNVQFSPTDQVLATA 539
Query: 555 SGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIA 614
S D TIK+W++ D SCLKTFEGH +SVL+ +F++RGAQ++S G+DGL+KLWT+++ EC+
Sbjct: 540 SADGTIKLWALQDFSCLKTFEGHDASVLKVAFVSRGAQLLSSGSDGLLKLWTIKSNECVR 599
Query: 615 TYDKHEDKIWALAVGKKTEMFATGGSDALVNLWHDSTXXXXXXXXXXXXXXVLRGQELEN 674
T D HEDK+W L + + TGGSD+ + LW D T V++ QEL+N
Sbjct: 600 TLDAHEDKVWGLHCSRLDDHAITGGSDSRIILWKDVTEAEQAEEQAKREEQVIKQQELDN 659
Query: 675 AVLDADYTKAIQVAFELRRPHKLFELFASVCR 706
+ + Y +A+ +A L RPH + + ++ R
Sbjct: 660 LLHEKRYLRALGLAISLDRPHTVLTVIQAIRR 691
Score = 513 (185.6 bits), Expect = 4.4e-141, Sum P(2) = 4.4e-141
Identities = 108/286 (37%), Positives = 157/286 (54%)
Query: 7 KKSYGCEPVLQQFYGGGPLVVSSDGSFIACACGESINIVDLSNAS-IKSTIEGGSDTITA 65
K +Y E ++ FY GG + G + C CG +NI+D+++ I+S + + ITA
Sbjct: 12 KANYAVERKIEPFYKGGKAQLDQTGRHLFCVCGTKVNILDVASGDLIRSLEQEDQEDITA 71
Query: 66 LALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKG-HDGPAIGMACHPSGGLLATAGADR 124
LSPDD++L ++ + + W R WK H P MA + LLAT G D
Sbjct: 72 FDLSPDDEVLVTASRALLLAQWAWREGTVARLWKAIHTAPVASMAFDATSTLLATGGCDG 131
Query: 125 KVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATL 184
V VWD+ + TH+F+G GVV + FHPD + LLFS + D ++RVW L + C+A L
Sbjct: 132 AVRVWDIVQHYGTHHFRGSPGVVHLVAFHPDPTRLLLFSSAVDTSIRVWSLQDRSCLAVL 191
Query: 185 DKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYEMVEAVCAIPPGSAF 244
H+S VTS++ + DG T++S+GRDK+ +WDLR Y TVP +E VEA +P A
Sbjct: 192 TAHYSAVTSLSFSEDGHTMLSSGRDKICIVWDLRSYETSRTVPVFESVEASVLLPEEPAL 251
Query: 245 DSFLSSYNQQTIKKKRRSLEIHFITVGERGIVRMWNADSA-CLYEQ 289
+ K L HF+T G++GI+R+W A S C+Y Q
Sbjct: 252 ----------ALGVKNSGL--HFLTAGDQGILRVWEAASGQCVYTQ 285
Score = 207 (77.9 bits), Expect = 5.5e-13, P = 5.5e-13
Identities = 52/170 (30%), Positives = 80/170 (47%)
Query: 46 DLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPA 105
DL +ST I +LA+SP+DKLL + R ++W L + L + GH
Sbjct: 465 DLIPLQAQSTQRCHDKDINSLAVSPNDKLLATGSQDRTAKLWALPQCQLLGVFSGHRRGL 524
Query: 106 IGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGS 165
+ P+ +LATA AD + +W + C F+GH V + F LL SGS
Sbjct: 525 WNVQFSPTDQVLATASADGTIKLWALQDFSCLKTFEGHDASVLKVAF-VSRGAQLLSSGS 583
Query: 166 DDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLW 215
D +++W + + +CV TLD H +V + + I+ G D + LW
Sbjct: 584 D-GLLKLWTIKSNECVRTLDAHEDKVWGLHCSRLDDHAITGGSDSRIILW 632
Score = 186 (70.5 bits), Expect = 1.0e-10, P = 1.0e-10
Identities = 43/143 (30%), Positives = 73/143 (51%)
Query: 88 DLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVV 147
DL L+ + + HD +A P+ LLAT DR +W + F GH+ +
Sbjct: 465 DLIPLQAQSTQRCHDKDINSLAVSPNDKLLATGSQDRTAKLWALPQCQLLGVFSGHRRGL 524
Query: 148 SSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAG 207
++ F P TD+ +L + S D T+++W L C+ T + H + V +A S G+ L+S+G
Sbjct: 525 WNVQFSP-TDQ-VLATASADGTIKLWALQDFSCLKTFEGHDASVLKVAFVSRGAQLLSSG 582
Query: 208 RDKVVNLWDLRDYSCKLTVPTYE 230
D ++ LW ++ C T+ +E
Sbjct: 583 SDGLLKLWTIKSNECVRTLDAHE 605
Score = 172 (65.6 bits), Expect = 3.4e-09, P = 3.4e-09
Identities = 81/361 (22%), Positives = 144/361 (39%)
Query: 291 SSDVTISFEMDDSKRGFTAATVLPSNQGLLCVTADQQLLLYTTVEVPEKKMELILSKRLV 350
S D+ S E +D + TA + P ++ L VTA + LLL + L K +
Sbjct: 54 SGDLIRSLEQEDQE-DITAFDLSPDDEVL--VTASRALLLAQWAW--REGTVARLWKAI- 107
Query: 351 GYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSG 410
+ + + F LA V+V+D+ ++ G S V+ L
Sbjct: 108 -HTAPVASMAF-DATSTLLATGGCDGAVRVWDIVQHYGTHHFRG-SPGVVHLVAFHPDPT 164
Query: 411 KILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWS 470
++L+ + + D S+R+W + R C+ V T H AV +++FS+ L SG D VW
Sbjct: 165 RLLLFSSAVDTSIRVWSLQDRSCLAVLTAHYSAVTSLSFSEDGHTMLSSGR-DKICIVWD 223
Query: 471 FDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVV 530
P+ +A V + +L V + T VW V
Sbjct: 224 LRSYETSRTVPVFESVEASVLLPEEPALALGVKNSGLHFLTAGDQGILRVWEAASGQCVY 283
Query: 531 T---FRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFL 587
T G ++ + + +++T + D + ++ K F G++ VL FL
Sbjct: 284 TQPQMSGLRQELTHCTLARAAGLLLTVTADHNLLLYEARSLQLQKQFAGYSEEVLDVRFL 343
Query: 588 -TRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNL 646
+ I+ +K++ ++T C + H D + AL V +K +FA+ D + +
Sbjct: 344 GPNDSHIIVASNSPCLKVFELQTLACQILHG-HTDIVLALDVFRKGWLFASCAKDQSIRI 402
Query: 647 W 647
W
Sbjct: 403 W 403
Score = 135 (52.6 bits), Expect = 3.4e-05, P = 3.4e-05
Identities = 46/213 (21%), Positives = 91/213 (42%)
Query: 31 GSFIACACGESINIVDLSNASIKSTIEGGSDTITALA-LSPDDKLLFSSGHSREIRVWDL 89
G + ++ + + + ++ G S+ + + L P+D + + +S ++V++L
Sbjct: 305 GLLLTVTADHNLLLYEARSLQLQKQFAGYSEEVLDVRFLGPNDSHIIVASNSPCLKVFEL 364
Query: 90 STLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVD-GG--FCTHYFKGHKGV 146
TL C + GH + + G L A+ D+ + +W ++ G C GH
Sbjct: 365 QTLAC-QILHGHTDIVLALDVFRKGWLFASCAKDQSIRIWRMNKAGQVACVAQGSGHTHS 423
Query: 147 VSSILFHPDTDKSLLFSGSDDATVRVW---------------DLLAKKCVATLDKHFSRV 191
V +I +S L +GS D TV++W DL+ + +T H +
Sbjct: 424 VGTICCSR-LKESFLVTGSQDCTVKLWPLPEALPSKNTASDGDLIPLQAQSTQRCHDKDI 482
Query: 192 TSMAITSDGSTLISAGRDKVVNLWDLRDYSCKL 224
S+A++ + L + +D+ LW L C+L
Sbjct: 483 NSLAVSPNDKLLATGSQDRTAKLWALPQ--CQL 513
Score = 132 (51.5 bits), Expect = 7.5e-101, Sum P(2) = 7.5e-101
Identities = 42/177 (23%), Positives = 72/177 (40%)
Query: 63 ITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPSGG--LLATA 120
+ ++A LL + G +RVWD+ ++G G +A HP LL ++
Sbjct: 112 VASMAFDATSTLLATGGCDGAVRVWDIVQHYGTHHFRGSPGVVHLVAFHPDPTRLLLFSS 171
Query: 121 GADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKC 180
D + VW + C H V+S+ F D ++L SG D + VWDL + +
Sbjct: 172 AVDTSIRVWSLQDRSCLAVLTAHYSAVTSLSFSED-GHTMLSSGRDKICI-VWDLRSYET 229
Query: 181 VATLDKHFSRVTS----------MAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVP 227
T+ S S + + + G ++AG ++ +W+ C T P
Sbjct: 230 SRTVPVFESVEASVLLPEEPALALGVKNSGLHFLTAGDQGILRVWEAASGQCVYTQP 286
>MGI|MGI:2384863 [details] [associations]
symbol:Tbl3 "transducin (beta)-like 3" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0032040
"small-subunit processome" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR013934 InterPro:IPR015943
Pfam:PF00400 Pfam:PF08625 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:2384863 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006364 GO:GO:0032040
HSSP:P63005 CTD:10607 HOGENOM:HOG000188765 HOVERGEN:HBG058869
KO:K14555 OrthoDB:EOG42JNQR OMA:HHFRGSP EMBL:AK081966 EMBL:AK137554
EMBL:AK149940 EMBL:AK165125 EMBL:BC019504 IPI:IPI00124057
RefSeq:NP_663371.2 UniGene:Mm.100353 ProteinModelPortal:Q8C4J7
SMR:Q8C4J7 STRING:Q8C4J7 PhosphoSite:Q8C4J7 PaxDb:Q8C4J7
PRIDE:Q8C4J7 Ensembl:ENSMUST00000126319 GeneID:213773
KEGG:mmu:213773 UCSC:uc008axv.1 GeneTree:ENSGT00690000102183
InParanoid:Q8C4J7 NextBio:374097 Bgee:Q8C4J7 Genevestigator:Q8C4J7
Uniprot:Q8C4J7
Length = 801
Score = 896 (320.5 bits), Expect = 9.1e-141, Sum P(2) = 9.1e-141
Identities = 186/455 (40%), Positives = 280/455 (61%)
Query: 261 RSLEIHFITVGERGIVRMWNADSA-CLYEQKSSDVTISFEMDDSKRGFTAATVLPSNQGL 319
+S +HF+T G++GI+R+W A S C+Y Q +M ++ T T+ + L
Sbjct: 256 KSSGLHFLTAGDQGILRVWEAASGQCVYTQP--------QMPGLRQELTHCTLARAADLL 307
Query: 320 LCVTADQQLLLYTTVEVPEKKMELILSKRLVGYNEEILDLKFLGEEEQYLAVATNIEQVQ 379
L VTAD LLLY + L L K+ GY+EE+LD++FLG + ++ VA+N ++
Sbjct: 308 LTVTADHNLLLY-------EAHSLQLQKQFAGYSEEVLDVRFLGPSDSHIVVASNSPCLK 360
Query: 380 VYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESR---CCVGV 436
V++L +++C +L GH++IVL LD G L + +KD S+R+W CV
Sbjct: 361 VFELQTLACQ-ILHGHTDIVLALDV--FRKGW-LFASCAKDQSIRIWKMNKAGQVACVAQ 416
Query: 437 GTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSF-DGL---SDDAEQ-PMNLKAKAVVA 491
G+GH +VG + S+ ++FLV+GS D T+K+W + L S A+ P+ L+A+
Sbjct: 417 GSGHTHSVGTICCSRLKESFLVTGSQDCTVKLWPLPEALLAKSTAADSGPVLLQAQTTRR 476
Query: 492 AHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVV 551
H KDINSLAV+PND L+ TGSQDRTA +W LP + F GH+RG+W+V+FSP DQV+
Sbjct: 477 CHDKDINSLAVSPNDKLLATGSQDRTAKLWALPQCQLLGVFTGHRRGLWNVQFSPTDQVL 536
Query: 552 ITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGE 611
TAS D TIK+W++ D SCLKTFEGH +SVL+ +F++RG+Q++S G+DGL+KLWT+++ E
Sbjct: 537 ATASADGTIKLWALQDFSCLKTFEGHDASVLKVAFVSRGSQLLSSGSDGLLKLWTIKSNE 596
Query: 612 CIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLWHDSTXXXXXXXXXXXXXXVLRGQE 671
C+ T D HEDK+W L + + TGGSD+ + LW D T V++ QE
Sbjct: 597 CVRTLDAHEDKVWGLHCSQLDDHAITGGSDSRIILWKDVTEAEQAEEQAKREEQVIKQQE 656
Query: 672 LENAVLDADYTKAIQVAFELRRPHKLFELFASVCR 706
L+N + + Y +A+ +A L RPH + + ++ R
Sbjct: 657 LDNLLHEKRYLRALGLAISLDRPHTVLTVIQAIRR 691
Score = 502 (181.8 bits), Expect = 9.1e-141, Sum P(2) = 9.1e-141
Identities = 107/286 (37%), Positives = 159/286 (55%)
Query: 7 KKSYGCEPVLQQFYGGGPLVVSSDGSFIACACGESINIVDL-SNASIKSTIEGGSDTITA 65
K +Y E ++ FY GG + G ++ C CG +NI+D+ S A ++S + + IT+
Sbjct: 12 KANYAVERKIEPFYKGGKAQLDQTGHYLFCVCGTKVNILDVASGALLRSLEQEDQEDITS 71
Query: 66 LALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKG-HDGPAIGMACHPSGGLLATAGADR 124
LSPDD++L ++ + + W R WK H P MA + LLAT G D
Sbjct: 72 FDLSPDDEVLVTASRALLLAQWAWREGTVTRLWKAIHTAPVASMAFDATSTLLATGGCDG 131
Query: 125 KVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATL 184
V VWD+ + TH+F+G GVV + FHPD + LLFS + D ++RVW L + C+A L
Sbjct: 132 AVRVWDIVQHYGTHHFRGSPGVVHLVAFHPDPTRLLLFSSAVDTSIRVWSLQDRSCLAVL 191
Query: 185 DKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYEMVEAVCAIPPGSAF 244
H+S VTS++ + G T++S+GRDK+ +WDL+ Y TVP +E VEA +P A
Sbjct: 192 TAHYSAVTSLSFSEGGHTMLSSGRDKICIVWDLQSYQTTRTVPVFESVEASVLLPEQPA- 250
Query: 245 DSFLSSYNQQTIKKKRRSLEIHFITVGERGIVRMWNADSA-CLYEQ 289
L +K S +HF+T G++GI+R+W A S C+Y Q
Sbjct: 251 -PALG------VK----SSGLHFLTAGDQGILRVWEAASGQCVYTQ 285
Score = 204 (76.9 bits), Expect = 1.2e-12, P = 1.2e-12
Identities = 48/153 (31%), Positives = 75/153 (49%)
Query: 63 ITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGA 122
I +LA+SP+DKLL + R ++W L + L + GH + P+ +LATA A
Sbjct: 482 INSLAVSPNDKLLATGSQDRTAKLWALPQCQLLGVFTGHRRGLWNVQFSPTDQVLATASA 541
Query: 123 DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVA 182
D + +W + C F+GH V + F LL SGSD +++W + + +CV
Sbjct: 542 DGTIKLWALQDFSCLKTFEGHDASVLKVAF-VSRGSQLLSSGSD-GLLKLWTIKSNECVR 599
Query: 183 TLDKHFSRVTSMAITSDGSTLISAGRDKVVNLW 215
TLD H +V + + I+ G D + LW
Sbjct: 600 TLDAHEDKVWGLHCSQLDDHAITGGSDSRIILW 632
Score = 183 (69.5 bits), Expect = 2.2e-10, P = 2.2e-10
Identities = 52/191 (27%), Positives = 87/191 (45%)
Query: 41 SINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSG-HSREIRVWDLSTLKCLRSWK 99
S+ + S + G D L P+ L S+ S + + +T +C
Sbjct: 423 SVGTICCSRLKESFLVTGSQDCTVKLWPLPEALLAKSTAADSGPVLLQAQTTRRC----- 477
Query: 100 GHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKS 159
HD +A P+ LLAT DR +W + F GH+ + ++ F P TD+
Sbjct: 478 -HDKDINSLAVSPNDKLLATGSQDRTAKLWALPQCQLLGVFTGHRRGLWNVQFSP-TDQ- 534
Query: 160 LLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRD 219
+L + S D T+++W L C+ T + H + V +A S GS L+S+G D ++ LW ++
Sbjct: 535 VLATASADGTIKLWALQDFSCLKTFEGHDASVLKVAFVSRGSQLLSSGSDGLLKLWTIKS 594
Query: 220 YSCKLTVPTYE 230
C T+ +E
Sbjct: 595 NECVRTLDAHE 605
Score = 171 (65.3 bits), Expect = 4.4e-09, P = 4.4e-09
Identities = 55/241 (22%), Positives = 99/241 (41%)
Query: 411 KILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWS 470
++L+ + + D S+R+W + R C+ V T H AV +++FS+ L SG D VW
Sbjct: 165 RLLLFSSAVDTSIRVWSLQDRSCLAVLTAHYSAVTSLSFSEGGHTMLSSGR-DKICIVWD 223
Query: 471 FDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVV 530
P+ +A V + +L V + T VW V
Sbjct: 224 LQSYQTTRTVPVFESVEASVLLPEQPAPALGVKSSGLHFLTAGDQGILRVWEAASGQCVY 283
Query: 531 T---FRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFL 587
T G ++ + + +++T + D + ++ K F G++ VL FL
Sbjct: 284 TQPQMPGLRQELTHCTLARAADLLLTVTADHNLLLYEAHSLQLQKQFAGYSEEVLDVRFL 343
Query: 588 -TRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNL 646
+ IV +K++ ++T C + H D + AL V +K +FA+ D + +
Sbjct: 344 GPSDSHIVVASNSPCLKVFELQTLACQILHG-HTDIVLALDVFRKGWLFASCAKDQSIRI 402
Query: 647 W 647
W
Sbjct: 403 W 403
Score = 166 (63.5 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 64/285 (22%), Positives = 112/285 (39%)
Query: 378 VQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSES---RCCV 434
++V+ L SC VL H V L + S G +++ +D +WD +S V
Sbjct: 177 IRVWSLQDRSCLAVLTAHYSAVTSL---SFSEGGHTMLSSGRDKICIVWDLQSYQTTRTV 233
Query: 435 GVGTGHMGAV-----GAVAFSKKLQ--NFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAK 487
V +V A A K +FL +G ++VW +A + +
Sbjct: 234 PVFESVEASVLLPEQPAPALGVKSSGLHFLTAGDQG-ILRVW-------EAASGQCVYTQ 285
Query: 488 AVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEF-SP 546
+ +++ +A L+ T + D ++ L F G+ + V F P
Sbjct: 286 PQMPGLRQELTHCTLARAADLLLTVTADHNLLLYEAHSLQLQKQFAGYSEEVLDVRFLGP 345
Query: 547 VDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWT 606
D ++ AS +K++ + +C + GHT VL +G SC D +++W
Sbjct: 346 SDSHIVVASNSPCLKVFELQTLAC-QILHGHTDIVLALDVFRKGWLFASCAKDQSIRIWK 404
Query: 607 V-RTGE--CIATYDKHEDKIWALAVGKKTEMF-ATGGSDALVNLW 647
+ + G+ C+A H + + + E F TG D V LW
Sbjct: 405 MNKAGQVACVAQGSGHTHSVGTICCSRLKESFLVTGSQDCTVKLW 449
Score = 155 (59.6 bits), Expect = 2.4e-07, P = 2.4e-07
Identities = 44/169 (26%), Positives = 75/169 (44%)
Query: 491 AAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEF--SPVD 548
A H + S+A +L+ TG D VW + FRG + V F P
Sbjct: 106 AIHTAPVASMAFDATSTLLATGGCDGAVRVWDIVQHYGTHHFRGSPGVVHLVAFHPDPTR 165
Query: 549 QVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVR 608
++ +++ D +I++WS+ D SCL H S+V SF G ++S G D + +W ++
Sbjct: 166 LLLFSSAVDTSIRVWSLQDRSCLAVLTAHYSAVTSLSFSEGGHTMLSSGRDKICIVWDLQ 225
Query: 609 ---TGECIATYDKHEDKIW-----ALAVGKKTE--MFATGGSDALVNLW 647
T + ++ E + A A+G K+ F T G ++ +W
Sbjct: 226 SYQTTRTVPVFESVEASVLLPEQPAPALGVKSSGLHFLTAGDQGILRVW 274
Score = 133 (51.9 bits), Expect = 5.6e-05, P = 5.6e-05
Identities = 48/200 (24%), Positives = 86/200 (43%)
Query: 44 IVDLSNASIKSTIEGGSDTITALA-LSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHD 102
+ + + ++ G S+ + + L P D + + +S ++V++L TL C + GH
Sbjct: 318 LYEAHSLQLQKQFAGYSEEVLDVRFLGPSDSHIVVASNSPCLKVFELQTLAC-QILHGHT 376
Query: 103 GPAIGMACHPSGGLLATAGADRKVLVWDVD-GG--FCTHYFKGHKGVVSSILFHPDTDKS 159
+ + G L A+ D+ + +W ++ G C GH V +I +S
Sbjct: 377 DIVLALDVFRKGWLFASCAKDQSIRIWKMNKAGQVACVAQGSGHTHSVGTICCSR-LKES 435
Query: 160 LLFSGSDDATVRVWDL----LAKKCVA-----------TLDKHFSRVTSMAITSDGSTLI 204
L +GS D TV++W L LAK A T H + S+A++ + L
Sbjct: 436 FLVTGSQDCTVKLWPLPEALLAKSTAADSGPVLLQAQTTRRCHDKDINSLAVSPNDKLLA 495
Query: 205 SAGRDKVVNLWDLRDYSCKL 224
+ +D+ LW L C+L
Sbjct: 496 TGSQDRTAKLWALPQ--CQL 513
Score = 132 (51.5 bits), Expect = 1.1e-101, Sum P(2) = 1.1e-101
Identities = 42/177 (23%), Positives = 72/177 (40%)
Query: 63 ITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPSGG--LLATA 120
+ ++A LL + G +RVWD+ ++G G +A HP LL ++
Sbjct: 112 VASMAFDATSTLLATGGCDGAVRVWDIVQHYGTHHFRGSPGVVHLVAFHPDPTRLLLFSS 171
Query: 121 GADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKC 180
D + VW + C H V+S+ F + ++L SG D + VWDL + +
Sbjct: 172 AVDTSIRVWSLQDRSCLAVLTAHYSAVTSLSFS-EGGHTMLSSGRDKICI-VWDLQSYQT 229
Query: 181 VATLDKHFSRVTS----------MAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVP 227
T+ S S + + S G ++AG ++ +W+ C T P
Sbjct: 230 TRTVPVFESVEASVLLPEQPAPALGVKSSGLHFLTAGDQGILRVWEAASGQCVYTQP 286
>UNIPROTKB|Q12788 [details] [associations]
symbol:TBL3 "Transducin beta-like protein 3" species:9606
"Homo sapiens" [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0032040 "small-subunit processome" evidence=IEA] [GO:0005057
"receptor signaling protein activity" evidence=TAS] [GO:0007199
"G-protein coupled receptor signaling pathway coupled to cGMP
nucleotide second messenger" evidence=TAS] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR013934
InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:CH471112 GO:GO:0005057
GO:GO:0007199 EMBL:AC005606 GO:GO:0006364 GO:GO:0032040
EMBL:AC005363 CTD:10607 HOGENOM:HOG000188765 HOVERGEN:HBG058869
KO:K14555 OrthoDB:EOG42JNQR EMBL:U02609 EMBL:AB209173 EMBL:BC010231
EMBL:BC014007 EMBL:BC035409 IPI:IPI00477971 PIR:A49367
RefSeq:NP_006444.2 UniGene:Hs.513267 ProteinModelPortal:Q12788
SMR:Q12788 IntAct:Q12788 MINT:MINT-1427903 STRING:Q12788
PhosphoSite:Q12788 DMDM:223634675 SWISS-2DPAGE:Q12788 PaxDb:Q12788
PRIDE:Q12788 Ensembl:ENST00000568546 GeneID:10607 KEGG:hsa:10607
UCSC:uc002cnu.1 GeneCards:GC16P002022 HGNC:HGNC:11587 HPA:HPA042562
MIM:605915 neXtProt:NX_Q12788 PharmGKB:PA36351 OMA:HHFRGSP
PhylomeDB:Q12788 GenomeRNAi:10607 NextBio:40288 ArrayExpress:Q12788
Bgee:Q12788 CleanEx:HS_TBL3 Genevestigator:Q12788
GermOnline:ENSG00000183751 Uniprot:Q12788
Length = 808
Score = 866 (309.9 bits), Expect = 8.2e-138, Sum P(2) = 8.2e-138
Identities = 186/455 (40%), Positives = 270/455 (59%)
Query: 261 RSLEIHFITVGERGIVRMWNADSA-CLYEQKSSDVTISFEMDDSKRGFTAATVLPSNQGL 319
+S ++F+T G++G +R+W A S C+Y Q E+ TA VL +
Sbjct: 256 KSPGLYFLTAGDQGTLRVWEAASGQCVYTQAQPPGP-GQELTHCTLAHTAGVVLTA---- 310
Query: 320 LCVTADQQLLLYTTVEVPEKKMELILSKRLVGYNEEILDLKFLGEEEQYLAVATNIEQVQ 379
TAD LLLY + L L K+ GY+EE+LD++FLG E+ ++ VA+N ++
Sbjct: 311 ---TADHNLLLY-------EARSLRLQKQFAGYSEEVLDVRFLGPEDSHVVVASNSPCLK 360
Query: 380 VYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESR---CCVGV 436
V++L + +C +L GH++IVL LD G L + +KD SVR+W CV
Sbjct: 361 VFELQTSACQ-ILHGHTDIVLALDV--FRKGW-LFASCAKDQSVRIWRMNKAGQVMCVAQ 416
Query: 437 GTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDG--LSDDAEQ---PMNLKAKAVVA 491
G+GH +VG V S+ ++FLV+GS D T+K+W LS + P+ L+A+
Sbjct: 417 GSGHTHSVGTVCCSRLKESFLVTGSQDCTVKLWPLPKALLSKNTAPDNGPILLQAQTTQR 476
Query: 492 AHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVV 551
H KDINS+A+APND L+ TGSQDRTA +W LP + F GH+RG+W V+FSP+DQV+
Sbjct: 477 CHDKDINSVAIAPNDKLLATGSQDRTAKLWALPQCQLLGVFSGHRRGLWCVQFSPMDQVL 536
Query: 552 ITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGE 611
TAS D TIK+W++ D SCLKTFEGH +SVL+ +F++RG Q++S G+DGLVKLWT++ E
Sbjct: 537 ATASADGTIKLWALQDFSCLKTFEGHDASVLKVAFVSRGTQLLSSGSDGLVKLWTIKNNE 596
Query: 612 CIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLWHDSTXXXXXXXXXXXXXXVLRGQE 671
C+ T D HEDK+W L + + TG SD+ V LW D T V+R QE
Sbjct: 597 CVRTLDAHEDKVWGLHCSRLDDHALTGASDSRVILWKDVTEAEQAEEQARQEEQVVRQQE 656
Query: 672 LENAVLDADYTKAIQVAFELRRPHKLFELFASVCR 706
L+N + + Y +A+ +A L RPH + + ++ R
Sbjct: 657 LDNLLHEKRYLRALGLAISLDRPHTVLTVIQAIRR 691
Score = 504 (182.5 bits), Expect = 8.2e-138, Sum P(2) = 8.2e-138
Identities = 106/286 (37%), Positives = 159/286 (55%)
Query: 7 KKSYGCEPVLQQFYGGGPLVVSSDGSFIACACGESINIVDL-SNASIKSTIEGGSDTITA 65
K +Y E ++ FY GG + G + C CG +NI+++ S A ++S + + ITA
Sbjct: 12 KTNYAVERKIEPFYKGGKAQLDQTGQHLFCVCGTRVNILEVASGAVLRSLEQEDQEDITA 71
Query: 66 LALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKG-HDGPAIGMACHPSGGLLATAGADR 124
LSPD+++L ++ + + W R WK H P MA P+ LLAT G D
Sbjct: 72 FDLSPDNEVLVTASRALLLAQWAWQEGSVTRLWKAIHTAPVATMAFDPTSTLLATGGCDG 131
Query: 125 KVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATL 184
V VWD+ + TH+F+G GVV + FHPD + LLFS + DA +RVW L + C+A L
Sbjct: 132 AVRVWDIVRHYGTHHFRGSPGVVHLVAFHPDPTRLLLFSSATDAAIRVWSLQDRSCLAVL 191
Query: 185 DKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYEMVEAVCAIPPGSAF 244
H+S VTS+A ++DG T++S+GRDK+ +WDL+ TVP +E VEA +P
Sbjct: 192 TAHYSAVTSLAFSADGHTMLSSGRDKICIIWDLQSCQATRTVPVFESVEAAVLLPE---- 247
Query: 245 DSFLSSYNQQTIKKKRRSLEIHFITVGERGIVRMWNADSA-CLYEQ 289
+Q +K S ++F+T G++G +R+W A S C+Y Q
Sbjct: 248 ----EPVSQLGVK----SPGLYFLTAGDQGTLRVWEAASGQCVYTQ 285
Score = 195 (73.7 bits), Expect = 1.1e-11, P = 1.1e-11
Identities = 89/367 (24%), Positives = 150/367 (40%)
Query: 286 LYEQKSSDVTISFEMDDSKRGFTAATVLPSNQGLLCVTADQQLLLYTTVEVPEKKMELIL 345
+ E S V S E +D + TA + P N+ L VTA + LLL ++ L
Sbjct: 49 ILEVASGAVLRSLEQEDQE-DITAFDLSPDNEVL--VTASRALLLAQWAW--QEGSVTRL 103
Query: 346 SKRLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTC 405
K + + + + F LA V+V+D+ ++ G S V+ L
Sbjct: 104 WKAI--HTAPVATMAF-DPTSTLLATGGCDGAVRVWDIVRHYGTHHFRG-SPGVVHLVAF 159
Query: 406 ALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHT 465
++L+ + + D ++R+W + R C+ V T H AV ++AFS L SG D
Sbjct: 160 HPDPTRLLLFSSATDAAIRVWSLQDRSCLAVLTAHYSAVTSLAFSADGHTMLSSGR-DKI 218
Query: 466 IKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAV-APNDSLVCTGSQDRTACVWRLP 524
+W P+ +A V + ++ L V +P + G Q T VW
Sbjct: 219 CIIWDLQSCQATRTVPVFESVEAAVLLPEEPVSQLGVKSPGLYFLTAGDQG-TLRVWEAA 277
Query: 525 DLVSVVTFR---GHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSV 581
V T G + + + VV+TA+ D + ++ K F G++ V
Sbjct: 278 SGQCVYTQAQPPGPGQELTHCTLAHTAGVVLTATADHNLLLYEARSLRLQKQFAGYSEEV 337
Query: 582 LRASFL-TRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGS 640
L FL + +V +K++ ++T C + H D + AL V +K +FA+
Sbjct: 338 LDVRFLGPEDSHVVVASNSPCLKVFELQTSACQILHG-HTDIVLALDVFRKGWLFASCAK 396
Query: 641 DALVNLW 647
D V +W
Sbjct: 397 DQSVRIW 403
Score = 188 (71.2 bits), Expect = 6.4e-11, P = 6.4e-11
Identities = 48/154 (31%), Positives = 74/154 (48%)
Query: 63 ITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGA 122
I ++A++P+DKLL + R ++W L + L + GH + P +LATA A
Sbjct: 482 INSVAIAPNDKLLATGSQDRTAKLWALPQCQLLGVFSGHRRGLWCVQFSPMDQVLATASA 541
Query: 123 DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVA 182
D + +W + C F+GH V + F LL SGSD V++W + +CV
Sbjct: 542 DGTIKLWALQDFSCLKTFEGHDASVLKVAF-VSRGTQLLSSGSD-GLVKLWTIKNNECVR 599
Query: 183 TLDKHFSRVTSMAITS-DGSTLISAGRDKVVNLW 215
TLD H +V + + D L A +V+ LW
Sbjct: 600 TLDAHEDKVWGLHCSRLDDHALTGASDSRVI-LW 632
Score = 173 (66.0 bits), Expect = 2.7e-09, P = 2.7e-09
Identities = 40/130 (30%), Positives = 66/130 (50%)
Query: 101 HDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSL 160
HD +A P+ LLAT DR +W + F GH+ + + F P D+ +
Sbjct: 478 HDKDINSVAIAPNDKLLATGSQDRTAKLWALPQCQLLGVFSGHRRGLWCVQFSP-MDQ-V 535
Query: 161 LFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDY 220
L + S D T+++W L C+ T + H + V +A S G+ L+S+G D +V LW +++
Sbjct: 536 LATASADGTIKLWALQDFSCLKTFEGHDASVLKVAFVSRGTQLLSSGSDGLVKLWTIKNN 595
Query: 221 SCKLTVPTYE 230
C T+ +E
Sbjct: 596 ECVRTLDAHE 605
Score = 127 (49.8 bits), Expect = 0.00025, P = 0.00025
Identities = 30/127 (23%), Positives = 57/127 (44%)
Query: 47 LSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAI 106
L + G + + SP D++L ++ I++W L CL++++GHD +
Sbjct: 508 LPQCQLLGVFSGHRRGLWCVQFSPMDQVLATASADGTIKLWALQDFSCLKTFEGHDASVL 567
Query: 107 GMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSD 166
+A G L ++G+D V +W + C H+ V + D +L +G+
Sbjct: 568 KVAFVSRGTQLLSSGSDGLVKLWTIKNNECVRTLDAHEDKVWGLHCSRLDDHAL--TGAS 625
Query: 167 DATVRVW 173
D+ V +W
Sbjct: 626 DSRVILW 632
Score = 125 (49.1 bits), Expect = 0.00042, P = 0.00042
Identities = 48/213 (22%), Positives = 89/213 (41%)
Query: 31 GSFIACACGESINIVDLSNASIKSTIEGGSDTITALA-LSPDDKLLFSSGHSREIRVWDL 89
G + ++ + + + ++ G S+ + + L P+D + + +S ++V++L
Sbjct: 305 GVVLTATADHNLLLYEARSLRLQKQFAGYSEEVLDVRFLGPEDSHVVVASNSPCLKVFEL 364
Query: 90 STLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVD-GG--FCTHYFKGHKGV 146
T C + GH + + G L A+ D+ V +W ++ G C GH
Sbjct: 365 QTSAC-QILHGHTDIVLALDVFRKGWLFASCAKDQSVRIWRMNKAGQVMCVAQGSGHTHS 423
Query: 147 VSSILFHPDTDKSLLFSGSDDATVRVWDL---LAKKCVA-----------TLDK-HFSRV 191
V ++ +S L +GS D TV++W L L K A T + H +
Sbjct: 424 VGTVCCSR-LKESFLVTGSQDCTVKLWPLPKALLSKNTAPDNGPILLQAQTTQRCHDKDI 482
Query: 192 TSMAITSDGSTLISAGRDKVVNLWDLRDYSCKL 224
S+AI + L + +D+ LW L C+L
Sbjct: 483 NSVAIAPNDKLLATGSQDRTAKLWALPQ--CQL 513
>DICTYBASE|DDB_G0276283 [details] [associations]
symbol:utp13 "U3 snoRNP protein" species:44689
"Dictyostelium discoideum" [GO:0032040 "small-subunit processome"
evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA;ISS]
[GO:0030515 "snoRNA binding" evidence=ISS] [GO:0005732 "small
nucleolar ribonucleoprotein complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR013934
InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0276283
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030515 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:AAFI02000014 GenomeReviews:CM000151_GR
GO:GO:0006364 GO:GO:0032040 GO:GO:0005732 KO:K14555 OMA:ADSKLIR
RefSeq:XP_643223.1 ProteinModelPortal:Q7KWS8 STRING:Q7KWS8
EnsemblProtists:DDB0237552 GeneID:8620427 KEGG:ddi:DDB_G0276283
InParanoid:Q7KWS8 ProtClustDB:CLSZ2741707 Uniprot:Q7KWS8
Length = 902
Score = 1172 (417.6 bits), Expect = 4.7e-119, P = 4.7e-119
Identities = 252/727 (34%), Positives = 412/727 (56%)
Query: 3 SLPLKKSYGCEPVLQQFYGGGPLVVSSDGSFIACACGESINIVDLSNASIKSTIEGGSDT 62
S LK + + + + GG L +S D FI G I I+D + ++ S IE SDT
Sbjct: 31 SRKLKTVFKPDYEIGSLFTGGSLRISEDSKFIVSQAGYEIKIIDTEHGTVISKIE--SDT 88
Query: 63 -ITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAG 121
I+ ALSP+++ + + +I+ + + ++ WKGH+GP + H SG ++A+A
Sbjct: 89 KISTFALSPNNEEILIGCSNLQIKQYRIEDQSLVKIWKGHEGPINEIDIHSSGNIVASAS 148
Query: 122 ADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCV 181
+D+ V VWD++ G+CTH F+ H VV+ + FHP K L + D +RV+DL+ K+CV
Sbjct: 149 SDKTVKVWDLEKGYCTHNFQ-HDDVVTMLKFHPTLLK--LVTVCLDLNIRVYDLVTKECV 205
Query: 182 ATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYEMVEAVCAIPPG 241
L H S+++ + ++ G LIS+GRDKV+N+WD+ + K T+P Y+ + + +P
Sbjct: 206 I-LTNHLSQISGITFSNSGKELISSGRDKVLNVWDMLSKNPKKTIPIYQELGGIITLPKE 264
Query: 242 SAFDSFL--SSYNQQTIKKKRRSLEIHF----------ITVGERGIVRMWNADSA-CLYE 288
S ++S S + I++K +++ H I +G ++R W ++ C++
Sbjct: 265 S-YNSLPENSKIKIEKIREKVKTMAAHADKIKNGDDITIVIGGEEVLRAWCTETGECIWN 323
Query: 289 QKSSDVTISFEMDDSKRG---FTAATVLPSNQGLLCVTADQQLLLYTTVEVPEKKMELIL 345
++ + + DD + +T ++++ + ++ +T++ LL+Y + E++ E+I
Sbjct: 324 DQNIEFKKKTDNDDKDKTDTLYTISSIINNKDKIISITSEHNLLIYNGKTL-ERQGEII- 381
Query: 346 SKRLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTC 405
GYN+EI+D+K++ ++ + VATN +++ YDL++ VL GH ++V+ +D
Sbjct: 382 -----GYNDEIIDIKYINDDN--IIVATNSNEIKTYDLNTKRAQ-VLRGHEDLVMSVDVS 433
Query: 406 ALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQN--FLVSGSSD 463
A GK I++GS+D S +WD E + + TGH G + VA KK F ++ S D
Sbjct: 434 A--DGKH-IISGSRDKSAMIWDLEKKESIAQLTGHTGVISCVALPKKPSTSMFAITASDD 490
Query: 464 HTIKVW------SFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRT 517
TIK+W S G D ++ + A AH KDINS+++APND + T SQD
Sbjct: 491 RTIKLWKGFSTTSSSGGDDSKKKDKKISASVTKIAHEKDINSISIAPNDKIFATASQDSY 550
Query: 518 ACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGH 577
+W + +L + + + H+RG+W VEFSP+DQ +T S D TIKIWS+SD +CLKT EGH
Sbjct: 551 VKLWNVNNLEPITSIKAHRRGVWHVEFSPIDQCFLTCSADGTIKIWSLSDYTCLKTLEGH 610
Query: 578 TSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFAT 637
SVL+ASF++ G QIVS ++GL+KLW ++T EC+ T++ HE KIWAL+V K E F T
Sbjct: 611 KGSVLKASFISFGMQIVSVASEGLIKLWNIKTNECLNTFEGHESKIWALSVAKDQERFIT 670
Query: 638 GGSDALVNLWHDSTXXXXXXXXXXXXXXVLRGQELENAVLDADYTKAIQVAFELRRPHKL 697
GGSD+ + W D T VL Q L+ A+ DY A+++A L +P +
Sbjct: 671 GGSDSKLIAWKDHTEIELEIQKKKEENQVLYKQHLDTAIRKKDYYSALKLALVLDQPRQT 730
Query: 698 FELFASV 704
+F S+
Sbjct: 731 LNIFNSM 737
>CGD|CAL0000293 [details] [associations]
symbol:UTP13 species:5476 "Candida albicans" [GO:0032040
"small-subunit processome" evidence=IDA] [GO:0034388
"Pwp2p-containing subcomplex of 90S preribosome" evidence=IEA]
[GO:0030515 "snoRNA binding" evidence=IEA] [GO:0000472
"endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA
from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA] [GO:0000447
"endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S
rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S
rRNA, LSU-rRNA)" evidence=IEA] [GO:0000480 "endonucleolytic
cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S
rRNA, LSU-rRNA)" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR013934 InterPro:IPR015943
Pfam:PF00400 Pfam:PF08625 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 CGD:CAL0000293 Gene3D:2.130.10.10 SUPFAM:SSF50978
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006364
GO:GO:0032040 EMBL:AACQ01000021 EMBL:AACQ01000022 KO:K14555
RefSeq:XP_720576.1 RefSeq:XP_720704.1 ProteinModelPortal:Q5AGB1
STRING:Q5AGB1 GeneID:3637636 GeneID:3637718 KEGG:cal:CaO19.11744
KEGG:cal:CaO19.4268 Uniprot:Q5AGB1
Length = 799
Score = 607 (218.7 bits), Expect = 2.4e-89, Sum P(2) = 2.4e-89
Identities = 148/456 (32%), Positives = 230/456 (50%)
Query: 266 HFITVGERGIVRMWNADSACLYEQKSSDVTISFEMDDSKRGFTAATVLPSNQGLLCVTAD 325
+F T G ++++W+ S + + + + E+ + N L V +D
Sbjct: 247 YFYTGGSENVLKIWDIKSGEMIGRSPIPLKTNEEL------LIIDVIKLYNNNLYLVISD 300
Query: 326 QQLLLYTTVEV-P---------EKKMELILSKRLVGYNEEILDLKFLGEEEQYLAVATNI 375
Q L+ E+ P ++ +E + KR+ G I D+K++G E LA+ATN
Sbjct: 301 QTLIELDLQELTPGHGHGHGQDDEIVEFPIVKRIAGNQGIIADIKYVGPEFNLLAMATNS 360
Query: 376 EQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLW--DSESRCC 433
+++ D+ V GH++I+ +D + GK I T SKDN RLW + E +
Sbjct: 361 PALRIVDIEKPLELRVYEGHTDILNAVDVS--TDGK-WIATASKDNEARLWRWNGELQDF 417
Query: 434 VGVGT--GHMGAVGAVAFSKKLQN---FLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKA 488
GH GA+ A++ SK QN FLV+GS+D TIK W + + +A
Sbjct: 418 EPFARFQGHAGAITAISLSKS-QNEPKFLVTGSTDLTIKKWKIPNTPNSIVKTSEYTRRA 476
Query: 489 VVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVD 548
H KDINS+ V+PND T S D+ VW+ ++ +GHKRG+W + F D
Sbjct: 477 ----HDKDINSIDVSPNDEYFATASYDKLGKVWQTDSGETIGVLKGHKRGLWDINFYKFD 532
Query: 549 QVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRG-AQIVSCGADGLVKLWTV 607
++++T SGDKTIK+WS+ D SC KT EGHT+SV R F R Q++SCGADGL+KLW
Sbjct: 533 KLIVTGSGDKTIKVWSLLDFSCKKTLEGHTNSVQRVKFFNREHPQLLSCGADGLIKLWDY 592
Query: 608 RTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLWHDSTXXXXXXXXXXXXXXVL 667
+ GE I + D H+ +IWA+ + E F T +D ++ W D+T +
Sbjct: 593 KQGEIIKSLDNHDQRIWAMDLKNDGEYFTTADADGKLSFWTDNTEEEVKFKELQAKEKIE 652
Query: 668 RGQELENAVLDADYTKAIQVAFELRRPHKLFELFAS 703
+ Q L N + + D++ A +A L +L+ + S
Sbjct: 653 QEQSLSNYIKNKDWSNAFLLALTLDHSMRLYNVIKS 688
Score = 304 (112.1 bits), Expect = 2.4e-89, Sum P(2) = 2.4e-89
Identities = 70/233 (30%), Positives = 116/233 (49%)
Query: 6 LKKSYGCEPVLQQFYGGGPLVVS-SDGSFI-ACACGESINIVDLSNASIKSTIEGGSDTI 63
LK +Y + + GG +S S+G + A E + I +L I I G + I
Sbjct: 4 LKTTYAHTDIEPIYVGGTSASISTSNGELLLATPLNEDVIITNLDTNEIIYKIPGDGEVI 63
Query: 64 TALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGAD 123
T L ++PD L S+ +R++DL+ ++++K P + + L A G+D
Sbjct: 64 TNLTITPDGSYLAMISQSQLLRIFDLNKGSVIKNFK-LPSPVYISSVDSTSSLFAFGGSD 122
Query: 124 RKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKS--LLFSGSDDATVRVWDLLAKKCV 181
+ VWD++ G+ TH KGH + S+ FH + + L SG TV++WDL+ ++C+
Sbjct: 123 GVITVWDIENGYVTHSLKGHGTTICSLTFHGELNSQDWRLASGDTMGTVKIWDLVKRRCI 182
Query: 182 ATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYEMVEA 234
TL H + V + DG IS GRD VV +++ +++ T P E +EA
Sbjct: 183 HTLKDHNTAVRGVGFDQDGDLFISGGRDNVVIIYNTKNFKTINTFPINEQIEA 235
Score = 185 (70.2 bits), Expect = 1.3e-10, P = 1.3e-10
Identities = 60/207 (28%), Positives = 97/207 (46%)
Query: 27 VSSDGSFIACACGESINIVDLSNASIK-----STIEGGSDTITALALSP---DDKLLFSS 78
VS+DG +IA A ++ + N ++ + +G + ITA++LS + K L +
Sbjct: 389 VSTDGKWIATASKDNEARLWRWNGELQDFEPFARFQGHAGAITAISLSKSQNEPKFLVTG 448
Query: 79 GHSREIRVWDL-----STLKCLR-SWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVD 132
I+ W + S +K + + HD + P+ ATA D+ VW D
Sbjct: 449 STDLTIKKWKIPNTPNSIVKTSEYTRRAHDKDINSIDVSPNDEYFATASYDKLGKVWQTD 508
Query: 133 GGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVT 192
G KGHK + I F+ DK L+ +GS D T++VW LL C TL+ H + V
Sbjct: 509 SGETIGVLKGHKRGLWDINFYK-FDK-LIVTGSGDKTIKVWSLLDFSCKKTLEGHTNSVQ 566
Query: 193 SMAITS-DGSTLISAGRDKVVNLWDLR 218
+ + + L+S G D ++ LWD +
Sbjct: 567 RVKFFNREHPQLLSCGADGLIKLWDYK 593
Score = 158 (60.7 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 35/153 (22%), Positives = 70/153 (45%)
Query: 63 ITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGA 122
I ++ +SP+D+ ++ + + +VW + + + KGH + + L+ T
Sbjct: 481 INSIDVSPNDEYFATASYDKLGKVWQTDSGETIGVLKGHKRGLWDINFYKFDKLIVTGSG 540
Query: 123 DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVA 182
D+ + VW + C +GH V + F LL G+D +++WD + +
Sbjct: 541 DKTIKVWSLLDFSCKKTLEGHTNSVQRVKFFNREHPQLLSCGAD-GLIKLWDYKQGEIIK 599
Query: 183 TLDKHFSRVTSMAITSDGSTLISAGRDKVVNLW 215
+LD H R+ +M + +DG +A D ++ W
Sbjct: 600 SLDNHDQRIWAMDLKNDGEYFTTADADGKLSFW 632
Score = 147 (56.8 bits), Expect = 8.6e-73, Sum P(2) = 8.6e-73
Identities = 47/201 (23%), Positives = 79/201 (39%)
Query: 25 LVVSSDGSFIACAC-GESINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSRE 83
L ++ DGS++A + + I DL+ S+ + S + S F G
Sbjct: 66 LTITPDGSYLAMISQSQLLRIFDLNKGSVIKNFKLPSPVYISSVDSTSSLFAFG-GSDGV 124
Query: 84 IRVWDLSTLKCLRSWKGHDGPAIGMACH----PSGGLLATAGADRKVLVWDVDGGFCTHY 139
I VWD+ S KGH + H LA+ V +WD+ C H
Sbjct: 125 ITVWDIENGYVTHSLKGHGTTICSLTFHGELNSQDWRLASGDTMGTVKIWDLVKRRCIHT 184
Query: 140 FKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVAT--LDKHFSRVTSMAIT 197
K H V + F D D L SG D V +++ K + T +++ +++
Sbjct: 185 LKDHNTAVRGVGF--DQDGDLFISGGRDNVVIIYNTKNFKTINTFPINEQIEAAGFVSLI 242
Query: 198 SDGSTLISAGRDKVVNLWDLR 218
D + G + V+ +WD++
Sbjct: 243 DDRQYFYTGGSENVLKIWDIK 263
Score = 136 (52.9 bits), Expect = 1.2e-71, Sum P(2) = 1.2e-71
Identities = 37/169 (21%), Positives = 77/169 (45%)
Query: 15 VLQQFYGGGPLVVSS-DGSFIACACGES---INIVDLSNASIKSTIEGGSDTITALA--- 67
V++ F P+ +SS D + A G S I + D+ N + +++G TI +L
Sbjct: 94 VIKNFKLPSPVYISSVDSTSSLFAFGGSDGVITVWDIENGYVTHSLKGHGTTICSLTFHG 153
Query: 68 -LSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKV 126
L+ D L S +++WDL +C+ + K H+ G+ G L + G D V
Sbjct: 154 ELNSQDWRLASGDTMGTVKIWDLVKRRCIHTLKDHNTAVRGVGFDQDGDLFISGGRDNVV 213
Query: 127 LVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDL 175
++++ + F ++ + ++ D+ ++G + +++WD+
Sbjct: 214 IIYNTKNFKTINTFPINEQIEAAGFVSLIDDRQYFYTGGSENVLKIWDI 262
Score = 135 (52.6 bits), Expect = 3.4e-05, P = 3.4e-05
Identities = 40/153 (26%), Positives = 69/153 (45%)
Query: 501 AVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPV--DQVVITASGDK 558
+V SL G D VW + + + +GH I S+ F Q ASGD
Sbjct: 108 SVDSTSSLFAFGGSDGVITVWDIENGYVTHSLKGHGTTICSLTFHGELNSQDWRLASGDT 167
Query: 559 --TIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATY 616
T+KIW + C+ T + H ++V F G +S G D +V ++ + + I T+
Sbjct: 168 MGTVKIWDLVKRRCIHTLKDHNTAVRGVGFDQDGDLFISGGRDNVVIIYNTKNFKTINTF 227
Query: 617 DKHE--DKIWALAVGKKTEMFATGGSDALVNLW 647
+E + +++ + F TGGS+ ++ +W
Sbjct: 228 PINEQIEAAGFVSLIDDRQYFYTGGSENVLKIW 260
Score = 132 (51.5 bits), Expect = 7.2e-05, P = 7.2e-05
Identities = 45/214 (21%), Positives = 87/214 (40%)
Query: 27 VSSDGSFIACACGE-SINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIR 85
V + + +A A ++ IVD+ EG +D + A+ +S D K + ++ E R
Sbjct: 347 VGPEFNLLAMATNSPALRIVDIEKPLELRVYEGHTDILNAVDVSTDGKWIATASKDNEAR 406
Query: 86 VW----DLSTLKCLRSWKGHDGPAIGMACHPSGG---LLATAGADRKVLVWDVDGG---- 134
+W +L + ++GH G ++ S L T D + W +
Sbjct: 407 LWRWNGELQDFEPFARFQGHAGAITAISLSKSQNEPKFLVTGSTDLTIKKWKIPNTPNSI 466
Query: 135 -FCTHYFK-GHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVT 192
+ Y + H ++SI P+ + + S D +VW + + + L H +
Sbjct: 467 VKTSEYTRRAHDKDINSIDVSPNDE--YFATASYDKLGKVWQTDSGETIGVLKGHKRGLW 524
Query: 193 SMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTV 226
+ +++ DK + +W L D+SCK T+
Sbjct: 525 DINFYKFDKLIVTGSGDKTIKVWSLLDFSCKKTL 558
Score = 128 (50.1 bits), Expect = 0.00020, P = 0.00020
Identities = 58/272 (21%), Positives = 116/272 (42%)
Query: 306 GFTAATVLPSNQGLLCVTADQQLLLYTTVEVPEKKMELILSKRLVGYNEEILDLKFLGEE 365
G T+A++ SN LL T + ++ T ++ E I+ K + G E I +L + +
Sbjct: 19 GGTSASISTSNGELLLATPLNEDVIITNLDTNE-----IIYK-IPGDGEVITNLT-ITPD 71
Query: 366 EQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRL 425
YLA+ + + ++++DL+ S S + + ++ S L G D + +
Sbjct: 72 GSYLAMISQSQLLRIFDLNKGSVIKNFKLPSPVYIS----SVDSTSSLFAFGGSDGVITV 127
Query: 426 WDSESRCCVGVGTGHMGAVGAVAFSKKL--QNF-LVSGSSDHTIKVWSFDGLSDDAEQPM 482
WD E+ GH + ++ F +L Q++ L SG + T+K+W +
Sbjct: 128 WDIENGYVTHSLKGHGTTICSLTFHGELNSQDWRLASGDTMGTVKIWDL----------V 177
Query: 483 NLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSV 542
+ + H + + + L +G +D ++ + ++ TF +++ I +
Sbjct: 178 KRRCIHTLKDHNTAVRGVGFDQDGDLFISGGRDNVVIIYNTKNFKTINTFPINEQ-IEAA 236
Query: 543 EF-SPVD--QVVITASGDKTIKIWSISDGSCL 571
F S +D Q T + +KIW I G +
Sbjct: 237 GFVSLIDDRQYFYTGGSENVLKIWDIKSGEMI 268
Score = 123 (48.4 bits), Expect = 0.00068, P = 0.00068
Identities = 67/318 (21%), Positives = 126/318 (39%)
Query: 349 LVGYNEEILDLKFLGE---EEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTC 405
L G+ I L F GE ++ LA + V+++DL C + L H+ V +
Sbjct: 139 LKGHGTTICSLTFHGELNSQDWRLASGDTMGTVKIWDLVKRRCIHTLKDHNTAVRGV--- 195
Query: 406 ALSSGKILIVTGSKDNSVRLWDSESRCCVGVG--TGHMGAVGAVAFSKKLQNFLVSGSSD 463
L ++G +DN V ++++++ + + A G V+ Q F +G S+
Sbjct: 196 GFDQDGDLFISGGRDNVVIIYNTKNFKTINTFPINEQIEAAGFVSLIDDRQYFY-TGGSE 254
Query: 464 HTIKVWSFDGLSDDAEQPMNLKAKA---VVAAHGKDINSLAVAPND-SLVCTGSQDRTAC 519
+ +K+W P+ LK ++ N+L + +D +L+ Q+ T
Sbjct: 255 NVLKIWDIKSGEMIGRSPIPLKTNEELLIIDVIKLYNNNLYLVISDQTLIELDLQELTPG 314
Query: 520 VWR-------LPDLVSVVTFRGHKRGIWSVEF-SPVDQVVITASGDKTIKIWSISDGSCL 571
+ + V G++ I +++ P ++ A+ ++I I L
Sbjct: 315 HGHGHGQDDEIVEFPIVKRIAGNQGIIADIKYVGPEFNLLAMATNSPALRIVDIEKPLEL 374
Query: 572 KTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWT----VRTGECIATYDKHEDKIWALA 627
+ +EGHT + T G I + D +LW ++ E A + H I A++
Sbjct: 375 RVYEGHTDILNAVDVSTDGKWIATASKDNEARLWRWNGELQDFEPFARFQGHAGAITAIS 434
Query: 628 VGKKTE--MFATGGSDAL 643
+ K F GS L
Sbjct: 435 LSKSQNEPKFLVTGSTDL 452
Score = 57 (25.1 bits), Expect = 2.6e-63, Sum P(2) = 2.6e-63
Identities = 16/96 (16%), Positives = 39/96 (40%)
Query: 41 SINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKG 100
++ I DL T++ + + + D L S G + +++ K + ++
Sbjct: 170 TVKIWDLVKRRCIHTLKDHNTAVRGVGFDQDGDLFISGGRDNVVIIYNTKNFKTINTFPI 229
Query: 101 HDG-PAIG-MACHPSGGLLATAGADRKVLVWDVDGG 134
++ A G ++ T G++ + +WD+ G
Sbjct: 230 NEQIEAAGFVSLIDDRQYFYTGGSENVLKIWDIKSG 265
>UNIPROTKB|Q5AGB1 [details] [associations]
symbol:CaO19.11744 "Putative uncharacterized protein"
species:237561 "Candida albicans SC5314" [GO:0032040 "small-subunit
processome" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR013934 InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 CGD:CAL0000293
Gene3D:2.130.10.10 SUPFAM:SSF50978 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006364 GO:GO:0032040
EMBL:AACQ01000021 EMBL:AACQ01000022 KO:K14555 RefSeq:XP_720576.1
RefSeq:XP_720704.1 ProteinModelPortal:Q5AGB1 STRING:Q5AGB1
GeneID:3637636 GeneID:3637718 KEGG:cal:CaO19.11744
KEGG:cal:CaO19.4268 Uniprot:Q5AGB1
Length = 799
Score = 607 (218.7 bits), Expect = 2.4e-89, Sum P(2) = 2.4e-89
Identities = 148/456 (32%), Positives = 230/456 (50%)
Query: 266 HFITVGERGIVRMWNADSACLYEQKSSDVTISFEMDDSKRGFTAATVLPSNQGLLCVTAD 325
+F T G ++++W+ S + + + + E+ + N L V +D
Sbjct: 247 YFYTGGSENVLKIWDIKSGEMIGRSPIPLKTNEEL------LIIDVIKLYNNNLYLVISD 300
Query: 326 QQLLLYTTVEV-P---------EKKMELILSKRLVGYNEEILDLKFLGEEEQYLAVATNI 375
Q L+ E+ P ++ +E + KR+ G I D+K++G E LA+ATN
Sbjct: 301 QTLIELDLQELTPGHGHGHGQDDEIVEFPIVKRIAGNQGIIADIKYVGPEFNLLAMATNS 360
Query: 376 EQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLW--DSESRCC 433
+++ D+ V GH++I+ +D + GK I T SKDN RLW + E +
Sbjct: 361 PALRIVDIEKPLELRVYEGHTDILNAVDVS--TDGK-WIATASKDNEARLWRWNGELQDF 417
Query: 434 VGVGT--GHMGAVGAVAFSKKLQN---FLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKA 488
GH GA+ A++ SK QN FLV+GS+D TIK W + + +A
Sbjct: 418 EPFARFQGHAGAITAISLSKS-QNEPKFLVTGSTDLTIKKWKIPNTPNSIVKTSEYTRRA 476
Query: 489 VVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVD 548
H KDINS+ V+PND T S D+ VW+ ++ +GHKRG+W + F D
Sbjct: 477 ----HDKDINSIDVSPNDEYFATASYDKLGKVWQTDSGETIGVLKGHKRGLWDINFYKFD 532
Query: 549 QVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRG-AQIVSCGADGLVKLWTV 607
++++T SGDKTIK+WS+ D SC KT EGHT+SV R F R Q++SCGADGL+KLW
Sbjct: 533 KLIVTGSGDKTIKVWSLLDFSCKKTLEGHTNSVQRVKFFNREHPQLLSCGADGLIKLWDY 592
Query: 608 RTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLWHDSTXXXXXXXXXXXXXXVL 667
+ GE I + D H+ +IWA+ + E F T +D ++ W D+T +
Sbjct: 593 KQGEIIKSLDNHDQRIWAMDLKNDGEYFTTADADGKLSFWTDNTEEEVKFKELQAKEKIE 652
Query: 668 RGQELENAVLDADYTKAIQVAFELRRPHKLFELFAS 703
+ Q L N + + D++ A +A L +L+ + S
Sbjct: 653 QEQSLSNYIKNKDWSNAFLLALTLDHSMRLYNVIKS 688
Score = 304 (112.1 bits), Expect = 2.4e-89, Sum P(2) = 2.4e-89
Identities = 70/233 (30%), Positives = 116/233 (49%)
Query: 6 LKKSYGCEPVLQQFYGGGPLVVS-SDGSFI-ACACGESINIVDLSNASIKSTIEGGSDTI 63
LK +Y + + GG +S S+G + A E + I +L I I G + I
Sbjct: 4 LKTTYAHTDIEPIYVGGTSASISTSNGELLLATPLNEDVIITNLDTNEIIYKIPGDGEVI 63
Query: 64 TALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGAD 123
T L ++PD L S+ +R++DL+ ++++K P + + L A G+D
Sbjct: 64 TNLTITPDGSYLAMISQSQLLRIFDLNKGSVIKNFK-LPSPVYISSVDSTSSLFAFGGSD 122
Query: 124 RKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKS--LLFSGSDDATVRVWDLLAKKCV 181
+ VWD++ G+ TH KGH + S+ FH + + L SG TV++WDL+ ++C+
Sbjct: 123 GVITVWDIENGYVTHSLKGHGTTICSLTFHGELNSQDWRLASGDTMGTVKIWDLVKRRCI 182
Query: 182 ATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYEMVEA 234
TL H + V + DG IS GRD VV +++ +++ T P E +EA
Sbjct: 183 HTLKDHNTAVRGVGFDQDGDLFISGGRDNVVIIYNTKNFKTINTFPINEQIEA 235
Score = 185 (70.2 bits), Expect = 1.3e-10, P = 1.3e-10
Identities = 60/207 (28%), Positives = 97/207 (46%)
Query: 27 VSSDGSFIACACGESINIVDLSNASIK-----STIEGGSDTITALALSP---DDKLLFSS 78
VS+DG +IA A ++ + N ++ + +G + ITA++LS + K L +
Sbjct: 389 VSTDGKWIATASKDNEARLWRWNGELQDFEPFARFQGHAGAITAISLSKSQNEPKFLVTG 448
Query: 79 GHSREIRVWDL-----STLKCLR-SWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVD 132
I+ W + S +K + + HD + P+ ATA D+ VW D
Sbjct: 449 STDLTIKKWKIPNTPNSIVKTSEYTRRAHDKDINSIDVSPNDEYFATASYDKLGKVWQTD 508
Query: 133 GGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVT 192
G KGHK + I F+ DK L+ +GS D T++VW LL C TL+ H + V
Sbjct: 509 SGETIGVLKGHKRGLWDINFYK-FDK-LIVTGSGDKTIKVWSLLDFSCKKTLEGHTNSVQ 566
Query: 193 SMAITS-DGSTLISAGRDKVVNLWDLR 218
+ + + L+S G D ++ LWD +
Sbjct: 567 RVKFFNREHPQLLSCGADGLIKLWDYK 593
Score = 158 (60.7 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 35/153 (22%), Positives = 70/153 (45%)
Query: 63 ITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGA 122
I ++ +SP+D+ ++ + + +VW + + + KGH + + L+ T
Sbjct: 481 INSIDVSPNDEYFATASYDKLGKVWQTDSGETIGVLKGHKRGLWDINFYKFDKLIVTGSG 540
Query: 123 DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVA 182
D+ + VW + C +GH V + F LL G+D +++WD + +
Sbjct: 541 DKTIKVWSLLDFSCKKTLEGHTNSVQRVKFFNREHPQLLSCGAD-GLIKLWDYKQGEIIK 599
Query: 183 TLDKHFSRVTSMAITSDGSTLISAGRDKVVNLW 215
+LD H R+ +M + +DG +A D ++ W
Sbjct: 600 SLDNHDQRIWAMDLKNDGEYFTTADADGKLSFW 632
Score = 147 (56.8 bits), Expect = 8.6e-73, Sum P(2) = 8.6e-73
Identities = 47/201 (23%), Positives = 79/201 (39%)
Query: 25 LVVSSDGSFIACAC-GESINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSRE 83
L ++ DGS++A + + I DL+ S+ + S + S F G
Sbjct: 66 LTITPDGSYLAMISQSQLLRIFDLNKGSVIKNFKLPSPVYISSVDSTSSLFAFG-GSDGV 124
Query: 84 IRVWDLSTLKCLRSWKGHDGPAIGMACH----PSGGLLATAGADRKVLVWDVDGGFCTHY 139
I VWD+ S KGH + H LA+ V +WD+ C H
Sbjct: 125 ITVWDIENGYVTHSLKGHGTTICSLTFHGELNSQDWRLASGDTMGTVKIWDLVKRRCIHT 184
Query: 140 FKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVAT--LDKHFSRVTSMAIT 197
K H V + F D D L SG D V +++ K + T +++ +++
Sbjct: 185 LKDHNTAVRGVGF--DQDGDLFISGGRDNVVIIYNTKNFKTINTFPINEQIEAAGFVSLI 242
Query: 198 SDGSTLISAGRDKVVNLWDLR 218
D + G + V+ +WD++
Sbjct: 243 DDRQYFYTGGSENVLKIWDIK 263
Score = 136 (52.9 bits), Expect = 1.2e-71, Sum P(2) = 1.2e-71
Identities = 37/169 (21%), Positives = 77/169 (45%)
Query: 15 VLQQFYGGGPLVVSS-DGSFIACACGES---INIVDLSNASIKSTIEGGSDTITALA--- 67
V++ F P+ +SS D + A G S I + D+ N + +++G TI +L
Sbjct: 94 VIKNFKLPSPVYISSVDSTSSLFAFGGSDGVITVWDIENGYVTHSLKGHGTTICSLTFHG 153
Query: 68 -LSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKV 126
L+ D L S +++WDL +C+ + K H+ G+ G L + G D V
Sbjct: 154 ELNSQDWRLASGDTMGTVKIWDLVKRRCIHTLKDHNTAVRGVGFDQDGDLFISGGRDNVV 213
Query: 127 LVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDL 175
++++ + F ++ + ++ D+ ++G + +++WD+
Sbjct: 214 IIYNTKNFKTINTFPINEQIEAAGFVSLIDDRQYFYTGGSENVLKIWDI 262
Score = 135 (52.6 bits), Expect = 3.4e-05, P = 3.4e-05
Identities = 40/153 (26%), Positives = 69/153 (45%)
Query: 501 AVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPV--DQVVITASGDK 558
+V SL G D VW + + + +GH I S+ F Q ASGD
Sbjct: 108 SVDSTSSLFAFGGSDGVITVWDIENGYVTHSLKGHGTTICSLTFHGELNSQDWRLASGDT 167
Query: 559 --TIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATY 616
T+KIW + C+ T + H ++V F G +S G D +V ++ + + I T+
Sbjct: 168 MGTVKIWDLVKRRCIHTLKDHNTAVRGVGFDQDGDLFISGGRDNVVIIYNTKNFKTINTF 227
Query: 617 DKHE--DKIWALAVGKKTEMFATGGSDALVNLW 647
+E + +++ + F TGGS+ ++ +W
Sbjct: 228 PINEQIEAAGFVSLIDDRQYFYTGGSENVLKIW 260
Score = 132 (51.5 bits), Expect = 7.2e-05, P = 7.2e-05
Identities = 45/214 (21%), Positives = 87/214 (40%)
Query: 27 VSSDGSFIACACGE-SINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIR 85
V + + +A A ++ IVD+ EG +D + A+ +S D K + ++ E R
Sbjct: 347 VGPEFNLLAMATNSPALRIVDIEKPLELRVYEGHTDILNAVDVSTDGKWIATASKDNEAR 406
Query: 86 VW----DLSTLKCLRSWKGHDGPAIGMACHPSGG---LLATAGADRKVLVWDVDGG---- 134
+W +L + ++GH G ++ S L T D + W +
Sbjct: 407 LWRWNGELQDFEPFARFQGHAGAITAISLSKSQNEPKFLVTGSTDLTIKKWKIPNTPNSI 466
Query: 135 -FCTHYFK-GHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVT 192
+ Y + H ++SI P+ + + S D +VW + + + L H +
Sbjct: 467 VKTSEYTRRAHDKDINSIDVSPNDE--YFATASYDKLGKVWQTDSGETIGVLKGHKRGLW 524
Query: 193 SMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTV 226
+ +++ DK + +W L D+SCK T+
Sbjct: 525 DINFYKFDKLIVTGSGDKTIKVWSLLDFSCKKTL 558
Score = 128 (50.1 bits), Expect = 0.00020, P = 0.00020
Identities = 58/272 (21%), Positives = 116/272 (42%)
Query: 306 GFTAATVLPSNQGLLCVTADQQLLLYTTVEVPEKKMELILSKRLVGYNEEILDLKFLGEE 365
G T+A++ SN LL T + ++ T ++ E I+ K + G E I +L + +
Sbjct: 19 GGTSASISTSNGELLLATPLNEDVIITNLDTNE-----IIYK-IPGDGEVITNLT-ITPD 71
Query: 366 EQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRL 425
YLA+ + + ++++DL+ S S + + ++ S L G D + +
Sbjct: 72 GSYLAMISQSQLLRIFDLNKGSVIKNFKLPSPVYIS----SVDSTSSLFAFGGSDGVITV 127
Query: 426 WDSESRCCVGVGTGHMGAVGAVAFSKKL--QNF-LVSGSSDHTIKVWSFDGLSDDAEQPM 482
WD E+ GH + ++ F +L Q++ L SG + T+K+W +
Sbjct: 128 WDIENGYVTHSLKGHGTTICSLTFHGELNSQDWRLASGDTMGTVKIWDL----------V 177
Query: 483 NLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSV 542
+ + H + + + L +G +D ++ + ++ TF +++ I +
Sbjct: 178 KRRCIHTLKDHNTAVRGVGFDQDGDLFISGGRDNVVIIYNTKNFKTINTFPINEQ-IEAA 236
Query: 543 EF-SPVD--QVVITASGDKTIKIWSISDGSCL 571
F S +D Q T + +KIW I G +
Sbjct: 237 GFVSLIDDRQYFYTGGSENVLKIWDIKSGEMI 268
Score = 123 (48.4 bits), Expect = 0.00068, P = 0.00068
Identities = 67/318 (21%), Positives = 126/318 (39%)
Query: 349 LVGYNEEILDLKFLGE---EEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTC 405
L G+ I L F GE ++ LA + V+++DL C + L H+ V +
Sbjct: 139 LKGHGTTICSLTFHGELNSQDWRLASGDTMGTVKIWDLVKRRCIHTLKDHNTAVRGV--- 195
Query: 406 ALSSGKILIVTGSKDNSVRLWDSESRCCVGVG--TGHMGAVGAVAFSKKLQNFLVSGSSD 463
L ++G +DN V ++++++ + + A G V+ Q F +G S+
Sbjct: 196 GFDQDGDLFISGGRDNVVIIYNTKNFKTINTFPINEQIEAAGFVSLIDDRQYFY-TGGSE 254
Query: 464 HTIKVWSFDGLSDDAEQPMNLKAKA---VVAAHGKDINSLAVAPND-SLVCTGSQDRTAC 519
+ +K+W P+ LK ++ N+L + +D +L+ Q+ T
Sbjct: 255 NVLKIWDIKSGEMIGRSPIPLKTNEELLIIDVIKLYNNNLYLVISDQTLIELDLQELTPG 314
Query: 520 VWR-------LPDLVSVVTFRGHKRGIWSVEF-SPVDQVVITASGDKTIKIWSISDGSCL 571
+ + V G++ I +++ P ++ A+ ++I I L
Sbjct: 315 HGHGHGQDDEIVEFPIVKRIAGNQGIIADIKYVGPEFNLLAMATNSPALRIVDIEKPLEL 374
Query: 572 KTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWT----VRTGECIATYDKHEDKIWALA 627
+ +EGHT + T G I + D +LW ++ E A + H I A++
Sbjct: 375 RVYEGHTDILNAVDVSTDGKWIATASKDNEARLWRWNGELQDFEPFARFQGHAGAITAIS 434
Query: 628 VGKKTE--MFATGGSDAL 643
+ K F GS L
Sbjct: 435 LSKSQNEPKFLVTGSTDL 452
Score = 57 (25.1 bits), Expect = 2.6e-63, Sum P(2) = 2.6e-63
Identities = 16/96 (16%), Positives = 39/96 (40%)
Query: 41 SINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKG 100
++ I DL T++ + + + D L S G + +++ K + ++
Sbjct: 170 TVKIWDLVKRRCIHTLKDHNTAVRGVGFDQDGDLFISGGRDNVVIIYNTKNFKTINTFPI 229
Query: 101 HDG-PAIG-MACHPSGGLLATAGADRKVLVWDVDGG 134
++ A G ++ T G++ + +WD+ G
Sbjct: 230 NEQIEAAGFVSLIDDRQYFYTGGSENVLKIWDIKSG 265
>SGD|S000004212 [details] [associations]
symbol:UTP13 "Nucleolar protein" species:4932 "Saccharomyces
cerevisiae" [GO:0005634 "nucleus" evidence=IEA] [GO:0042254
"ribosome biogenesis" evidence=IEA] [GO:0030686 "90S preribosome"
evidence=IDA] [GO:0030515 "snoRNA binding" evidence=IPI]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA] [GO:0034388
"Pwp2p-containing subcomplex of 90S preribosome" evidence=IDA]
[GO:0006364 "rRNA processing" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA;IDA] [GO:0032040 "small-subunit processome"
evidence=IEA;IDA] [GO:0000480 "endonucleolytic cleavage in 5'-ETS
of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IMP] [GO:0000447 "endonucleolytic cleavage in ITS1 to
separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
[GO:0000462 "maturation of SSU-rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
[GO:0000472 "endonucleolytic cleavage to generate mature 5'-end of
SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR013934
InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SGD:S000004212 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030515
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 EMBL:BK006945
EMBL:U19027 GO:GO:0032040 GO:GO:0000447 GO:GO:0000472 GO:GO:0000480
GO:GO:0034388 HOGENOM:HOG000188765 KO:K14555
GeneTree:ENSGT00690000102183 OrthoDB:EOG4DZ53K PIR:S51445
RefSeq:NP_013323.1 ProteinModelPortal:Q05946 SMR:Q05946
DIP:DIP-4790N IntAct:Q05946 MINT:MINT-501291 STRING:Q05946
PaxDb:Q05946 PeptideAtlas:Q05946 EnsemblFungi:YLR222C GeneID:850919
KEGG:sce:YLR222C CYGD:YLR222c OMA:ADSKLIR NextBio:967338
Genevestigator:Q05946 GermOnline:YLR222C Uniprot:Q05946
Length = 817
Score = 872 (312.0 bits), Expect = 2.9e-87, P = 2.9e-87
Identities = 240/733 (32%), Positives = 366/733 (49%)
Query: 4 LPLKKSY-GCEPVLQQFYGGGPLV--VSSDGSFIACACGESINIVDLSNASIK--STIEG 58
+ LK SY G L Y G V VS +G +A + INI+DL+ S K I
Sbjct: 1 MDLKTSYKGIS--LNPIYAGSSAVATVSENGKILATPVLDEINIIDLTPGSRKILHKISN 58
Query: 59 GSDT-ITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPSGGLL 117
+ ITAL L+PD + L ++ ++++ L T K +RS K P+ + + LL
Sbjct: 59 EDEQEITALKLTPDGQYLTYVSQAQLLKIFHLKTGKVVRSMK-ISSPSYILDADSTSTLL 117
Query: 118 ATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKS--LLFSGSDDATVRVWDL 175
A G D ++V D++ G+ TH FKGH G +SS+ F+ + LL SG + V+VWDL
Sbjct: 118 AVGGTDGSIIVVDIENGYITHSFKGHGGTISSLKFYGQLNSKIWLLASGDTNGMVKVWDL 177
Query: 176 LAKKCVATLDKHFSRVTSMAITS--DGS----TLISAGRDKVVNLWDLR-DYSCKL--TV 226
+ +KC+ TL +H S V + I D L+S GRD ++NLWD CKL T+
Sbjct: 178 VKRKCLHTLQEHTSAVRGLDIIEVPDNDEPSLNLLSGGRDDIINLWDFNMKKKCKLLKTL 237
Query: 227 PTYEMVEAVCAIPPGSAFDSFLSSYNQQTIKKKRRSLEIHFITVGERGIVRMWNADSACL 286
P + VE+ C FL + + I T G I ++ +++S +
Sbjct: 238 PVNQQVES-CG---------FLKDGDGKRI----------IYTAGGDAIFQLIDSESGSV 277
Query: 287 YEQKSSDVTISFEMDDSKRGFTAATVLP--SNQGLLCVTADQQLLLYTTVEVPEKKMELI 344
++ + + F + VLP SN + V +DQ L L E + + I
Sbjct: 278 LKRTNKPIEELFIIG----------VLPILSNSQMFLVLSDQTLQLINVEEDLKNDEDTI 327
Query: 345 -LSKRLVGYNEEILDLKFLGEEEQYLAVATN---IEQVQVYDLSSMSCSYVL-----AGH 395
++ + G + I D++++G E LA+ATN + + V DLS S L GH
Sbjct: 328 QVTSSIAGNHGIIADMRYVGPELNKLALATNSPSLRIIPVPDLSGPEASLPLDVEIYEGH 387
Query: 396 SEIVLCLDTCALSSGKILIVTGSKDNSVRLWD-SESRCCVGVGT---GHMGAVGAVAF-- 449
+++ LD A G + I T SKDN+ +W +E+ C + GH AV AV
Sbjct: 388 EDLLNSLD--ATEDG-LWIATASKDNTAIVWRYNENSCKFDIYAKYIGHSAAVTAVGLPN 444
Query: 450 --SKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDS 507
SK FL++ S+D TIK W + + + ++ AH KDIN+L+V+PNDS
Sbjct: 445 IVSKGYPEFLLTASNDLTIKKWIIPKPTASMDVQIIKVSEYTRHAHEKDINALSVSPNDS 504
Query: 508 LVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISD 567
+ T S D+T +W L + T HKRG+W V F D+++ T+SGDKT+KIWS+
Sbjct: 505 IFATASYDKTCKIWNLENGELEATLANHKRGLWDVSFCQYDKLLATSSGDKTVKIWSLDT 564
Query: 568 GSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALA 627
S +KT EGHT++V R SF+ + Q++SCGADGL+K+W +GEC+ T D H +++WAL+
Sbjct: 565 FSVMKTLEGHTNAVQRCSFINKQKQLISCGADGLIKIWDCSSGECLKTLDGHNNRLWALS 624
Query: 628 VGKKTEMFATGGSDALVNLWHDSTXXXXXXXXXXXXXXVLRGQELENAVLDADYTKAIQV 687
+M + +D + W D T V + Q L+N + D+T A +
Sbjct: 625 TMNDGDMIVSADADGVFQFWKDCTEQEIEEEQEKAKLQVEQEQSLQNYMSKGDWTNAFLL 684
Query: 688 AFELRRPHKLFEL 700
A L P +LF +
Sbjct: 685 AMTLDHPMRLFNV 697
>UNIPROTKB|J3KNP2 [details] [associations]
symbol:TBL3 "Transducin beta-like protein 3" species:9606
"Homo sapiens" [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0032040 "small-subunit processome" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR013934
InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 InterPro:IPR011047 SUPFAM:SSF50998 EMBL:AC005606
GO:GO:0006364 GO:GO:0032040 EMBL:AC005363 HGNC:HGNC:11587
Ensembl:ENST00000332704 Uniprot:J3KNP2
Length = 697
Score = 802 (287.4 bits), Expect = 7.6e-80, P = 7.6e-80
Identities = 210/600 (35%), Positives = 317/600 (52%)
Query: 134 GFCTHYFKG-HKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVT 192
G T +K H V+++ F P + +LL +G D VRVWD++ V
Sbjct: 6 GSVTRLWKAIHTAPVATMAFDPTS--TLLATGGCDGAVRVWDIVRHYGTHHFRGSPGVVH 63
Query: 193 SMAITSDGSTLI--SAGRDKVVNLWDLRDYSCKLTVPT--YEMVEAVCAIPPG-----SA 243
+A D + L+ S+ D + +W L+D SC L V T Y V ++ G S
Sbjct: 64 LVAFHPDPTRLLLFSSATDAAIRVWSLQDRSC-LAVLTAHYSAVTSLAFSADGHTMLSSG 122
Query: 244 FDSFLSSYNQQTIKKKR-----RSLEIHFITVGERGIVRMWNADSACLYEQKSSDV-TIS 297
D ++ Q+ + R S+E + + E + ++ S LY + D T+
Sbjct: 123 RDKICIIWDLQSCQATRTVPVFESVEAA-VLLPEEPVSQL-GVKSPGLYFLTAGDQGTLR 180
Query: 298 -FEMDDSKRGFTAATVLPSNQGLL-CVTADQQ-LLLYTTVE---VPEKKMELILSKRLVG 351
+E + +T A Q L C A ++L T + + + L L K+ G
Sbjct: 181 VWEAASGQCVYTQAQPPGPGQELTHCTLAHTAGVVLTATADHNLLLYEARSLRLQKQFAG 240
Query: 352 YNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGK 411
Y+EE+LD++FLG E+ ++ VA+N ++V++L + +C +L GH++IVL LD G
Sbjct: 241 YSEEVLDVRFLGPEDSHVVVASNSPCLKVFELQTSACQ-ILHGHTDIVLALDV--FRKGW 297
Query: 412 ILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSF 471
L + +KD SVR+W M G V ++FLV+GS D T+K+W
Sbjct: 298 -LFASCAKDQSVRIW-------------RMNKAGQVMLK---ESFLVTGSQDCTVKLWPL 340
Query: 472 DG--LSDDAEQ---PMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDL 526
LS + P+ L+A+ H KDINS+A+APND L+ TGSQDRTA +W LP
Sbjct: 341 PKALLSKNTAPDNGPILLQAQTTQRCHDKDINSVAIAPNDKLLATGSQDRTAKLWALPQC 400
Query: 527 VSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASF 586
+ F GH+RG+W V+FSP+DQV+ TAS D TIK+W++ D SCLKTFEGH +SVL+ +F
Sbjct: 401 QLLGVFSGHRRGLWCVQFSPMDQVLATASADGTIKLWALQDFSCLKTFEGHDASVLKVAF 460
Query: 587 LTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNL 646
++RG Q++S G+DGLVKLWT++ EC+ T D HEDK+W L + + TG SD+ V L
Sbjct: 461 VSRGTQLLSSGSDGLVKLWTIKNNECVRTLDAHEDKVWGLHCSRLDDHALTGASDSRVIL 520
Query: 647 WHDSTXXXXXXXXXXXXXXVLRGQELENAVLDADYTKAIQVAFELRRPHKLFELFASVCR 706
W D T V+R QEL+N + + Y +A+ +A L RPH + + ++ R
Sbjct: 521 WKDVTEAEQAEEQARQEEQVVRQQELDNLLHEKRYLRALGLAISLDRPHTVLTVIQAIRR 580
Score = 390 (142.3 bits), Expect = 2.9e-33, P = 2.9e-33
Identities = 81/196 (41%), Positives = 114/196 (58%)
Query: 96 RSWKG-HDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHP 154
R WK H P MA P+ LLAT G D V VWD+ + TH+F+G GVV + FHP
Sbjct: 10 RLWKAIHTAPVATMAFDPTSTLLATGGCDGAVRVWDIVRHYGTHHFRGSPGVVHLVAFHP 69
Query: 155 DTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNL 214
D + LLFS + DA +RVW L + C+A L H+S VTS+A ++DG T++S+GRDK+ +
Sbjct: 70 DPTRLLLFSSATDAAIRVWSLQDRSCLAVLTAHYSAVTSLAFSADGHTMLSSGRDKICII 129
Query: 215 WDLRDYSCKLTVPTYEMVEAVCAIPPGSAFDSFLSSYNQQTIKKKRRSLEIHFITVGERG 274
WDL+ TVP +E VEA +P +Q +K S ++F+T G++G
Sbjct: 130 WDLQSCQATRTVPVFESVEAAVLLPE--------EPVSQLGVK----SPGLYFLTAGDQG 177
Query: 275 IVRMWNADSA-CLYEQ 289
+R+W A S C+Y Q
Sbjct: 178 TLRVWEAASGQCVYTQ 193
Score = 188 (71.2 bits), Expect = 5.1e-11, P = 5.1e-11
Identities = 48/154 (31%), Positives = 74/154 (48%)
Query: 63 ITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGA 122
I ++A++P+DKLL + R ++W L + L + GH + P +LATA A
Sbjct: 371 INSVAIAPNDKLLATGSQDRTAKLWALPQCQLLGVFSGHRRGLWCVQFSPMDQVLATASA 430
Query: 123 DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVA 182
D + +W + C F+GH V + F LL SGSD V++W + +CV
Sbjct: 431 DGTIKLWALQDFSCLKTFEGHDASVLKVAF-VSRGTQLLSSGSD-GLVKLWTIKNNECVR 488
Query: 183 TLDKHFSRVTSMAITS-DGSTLISAGRDKVVNLW 215
TLD H +V + + D L A +V+ LW
Sbjct: 489 TLDAHEDKVWGLHCSRLDDHALTGASDSRVI-LW 521
Score = 186 (70.5 bits), Expect = 8.4e-11, P = 8.4e-11
Identities = 59/205 (28%), Positives = 98/205 (47%)
Query: 33 FIACACGESINIVDLSNAS---IK-STIEGGSDTITALALSPDDKLLFSSGHSRE---IR 85
F +CA +S+ I ++ A +K S + GS T + L P K L S + + I
Sbjct: 299 FASCAKDQSVRIWRMNKAGQVMLKESFLVTGSQDCT-VKLWPLPKALLSKNTAPDNGPIL 357
Query: 86 VWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKG 145
+ +T +C HD +A P+ LLAT DR +W + F GH+
Sbjct: 358 LQAQTTQRC------HDKDINSVAIAPNDKLLATGSQDRTAKLWALPQCQLLGVFSGHRR 411
Query: 146 VVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLIS 205
+ + F P D+ +L + S D T+++W L C+ T + H + V +A S G+ L+S
Sbjct: 412 GLWCVQFSP-MDQ-VLATASADGTIKLWALQDFSCLKTFEGHDASVLKVAFVSRGTQLLS 469
Query: 206 AGRDKVVNLWDLRDYSCKLTVPTYE 230
+G D +V LW +++ C T+ +E
Sbjct: 470 SGSDGLVKLWTIKNNECVRTLDAHE 494
Score = 139 (54.0 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 56/259 (21%), Positives = 98/259 (37%)
Query: 63 ITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPSGG--LLATA 120
+ +A P LL + G +RVWD+ ++G G +A HP LL ++
Sbjct: 20 VATMAFDPTSTLLATGGCDGAVRVWDIVRHYGTHHFRGSPGVVHLVAFHPDPTRLLLFSS 79
Query: 121 GADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKC 180
D + VW + C H V+S+ F D ++L SG D + +WDL + +
Sbjct: 80 ATDAAIRVWSLQDRSCLAVLTAHYSAVTSLAFSAD-GHTMLSSGRDKICI-IWDLQSCQA 137
Query: 181 VATLDKHFS----------RVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTV---- 226
T+ S V+ + + S G ++AG + +W+ C T
Sbjct: 138 TRTVPVFESVEAAVLLPEEPVSQLGVKSPGLYFLTAGDQGTLRVWEAASGQCVYTQAQPP 197
Query: 227 -PTYEMVEAVCAIPPGSAFDSFLSSYNQQTIKKKRRSLEIHFITVGERGI-VRMWNADSA 284
P E+ A G + + +N + + L+ F E + VR + +
Sbjct: 198 GPGQELTHCTLAHTAGVVLTA-TADHNLLLYEARSLRLQKQFAGYSEEVLDVRFLGPEDS 256
Query: 285 CLYEQKSSDVTISFEMDDS 303
+ +S FE+ S
Sbjct: 257 HVVVASNSPCLKVFELQTS 275
Score = 136 (52.9 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 41/156 (26%), Positives = 65/156 (41%)
Query: 38 CGESINIVDLSNASIKSTIEGGSDTITALALSPDDK--LLFSSGHSREIRVWDLSTLKCL 95
C ++ + D+ G + +A PD LLFSS IRVW L CL
Sbjct: 37 CDGAVRVWDIVRHYGTHHFRGSPGVVHLVAFHPDPTRLLLFSSATDAAIRVWSLQDRSCL 96
Query: 96 RSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILF--H 153
H +A G + ++G D+ ++WD+ T + V +++L
Sbjct: 97 AVLTAHYSAVTSLAFSADGHTMLSSGRDKICIIWDLQSCQATRTVPVFESVEAAVLLPEE 156
Query: 154 PDTD---KS--LLF-SGSDDATVRVWDLLAKKCVAT 183
P + KS L F + D T+RVW+ + +CV T
Sbjct: 157 PVSQLGVKSPGLYFLTAGDQGTLRVWEAASGQCVYT 192
Score = 127 (49.8 bits), Expect = 0.00021, P = 0.00021
Identities = 30/127 (23%), Positives = 57/127 (44%)
Query: 47 LSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAI 106
L + G + + SP D++L ++ I++W L CL++++GHD +
Sbjct: 397 LPQCQLLGVFSGHRRGLWCVQFSPMDQVLATASADGTIKLWALQDFSCLKTFEGHDASVL 456
Query: 107 GMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSD 166
+A G L ++G+D V +W + C H+ V + D +L +G+
Sbjct: 457 KVAFVSRGTQLLSSGSDGLVKLWTIKNNECVRTLDAHEDKVWGLHCSRLDDHAL--TGAS 514
Query: 167 DATVRVW 173
D+ V +W
Sbjct: 515 DSRVILW 521
>FB|FBgn0033454 [details] [associations]
symbol:CG1671 species:7227 "Drosophila melanogaster"
[GO:0006364 "rRNA processing" evidence=IEA] [GO:0032040
"small-subunit processome" evidence=IEA] [GO:0022008 "neurogenesis"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR013934 InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 EMBL:AE013599
GO:GO:0022008 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006364 HSSP:P16649 GO:GO:0032040 KO:K14555
GeneTree:ENSGT00690000102183 OMA:ADSKLIR EMBL:BT004480
RefSeq:NP_610526.1 UniGene:Dm.18811 SMR:Q7JQT9 IntAct:Q7JQT9
STRING:Q7JQT9 EnsemblMetazoa:FBtr0088373 GeneID:36019
KEGG:dme:Dmel_CG1671 UCSC:CG1671-RA FlyBase:FBgn0033454
HOGENOM:HOG000244907 InParanoid:Q7JQT9 OrthoDB:EOG4KPRRV
GenomeRNAi:36019 NextBio:796373 Uniprot:Q7JQT9
Length = 787
Score = 682 (245.1 bits), Expect = 2.3e-74, Sum P(2) = 2.3e-74
Identities = 193/617 (31%), Positives = 309/617 (50%)
Query: 117 LATAGADRKVLVWDVDGGFCTHYFKG-HKGVVSSILFHPDTDKSLLFSGSDDATVRVWDL 175
L TA + +W +D G +K HKG V + F P + + SG DAT+R+WD
Sbjct: 91 LVTAHRSGLLRLWQLDTGKLVKLWKAQHKGPVIRVEFSP-CGRLICTSGGADATLRLWDY 149
Query: 176 LAKKCVATLDKHFSRVTSMAITSDG---STLISAGRDKVVNLWD---------LRDYSCK 223
C+ L K F + + + + G D V W+ +R + +
Sbjct: 150 SNNSCLGAL-KDFPGPAWLLVFHPNVLRKEIYAGGSDNTVYAWNYETKTLVHKMRGHLSQ 208
Query: 224 LTVPTYEMVEAVCAIPPGSAFDSFLSSYN-QQTIKKKRRSL-----EIHFITVGERGIVR 277
+T +++ + C + D + + Q+ ++ K+ + E+ + + G +
Sbjct: 209 VTGLSFKSNASDCNEIVTVSRDKVMIVWQLQEQLESKQLKVLPLYDELEGVVYADEGQLI 268
Query: 278 MWNADSACLYEQKSSDVTISFEMDD--SKRGFTAATVLPSNQ--GLLCVTADQQLLLYTT 333
+ + S L + S+++ D S+ F + +L ++ L VT +Q +L+Y
Sbjct: 269 IVASGSGKLQQVDPK----SWKIRDILSQSDFQISRLLHCSELKQLALVTTEQNILVYD- 323
Query: 334 VEVPEKKMELILSKRLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLS-SMSCSYVL 392
VE +E I K LVGYN+EILD+ F+GE ++YLAVATN + ++YD M+C ++
Sbjct: 324 VET----LEPI--KHLVGYNDEILDMCFMGEHDRYLAVATNSKHFKLYDTEHDMNCKLIV 377
Query: 393 AGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLW--DSESRCCVGVGTG----HMGAVGA 446
GHS+ V+ L +S +LI G KD SVRLW + C + T H +G
Sbjct: 378 -GHSDTVMSL----AASQNLLISVG-KDCSVRLWRLQHDKDCSLEALTQQANCHTSTIGC 431
Query: 447 VAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQ-PMNLKAKAVVAAHGKDINSLAVAPN 505
VA + S S D ++KVW +D NL+ A+ +H K++N +A APN
Sbjct: 432 VAMTHNGATGFASVSQDGSMKVWQLVRSKEDRNSYSFNLRYAAL--SHDKEVNCVAYAPN 489
Query: 506 DSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSI 565
+ L+ T SQD+TA VW RGH RG+WSV FSPVDQ+V+T+S D T++IWSI
Sbjct: 490 NKLIATASQDKTAKVWLAESNTLQGVLRGHTRGVWSVRFSPVDQIVLTSSSDCTLRIWSI 549
Query: 566 SDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWA 625
S+ SC+K F+ ++LRA FL G I+S +DGL+KLW ++T C+ + D+H D++WA
Sbjct: 550 SNFSCIKRFD-QECTILRAEFLDHGKFIISAASDGLLKLWNIKTNTCLQSLDEHNDRVWA 608
Query: 626 LAVGKKTE-MFATGGSDALVNLWHDSTXXXXXXXXXXXXXXVLRGQELENAV-LDADYTK 683
LAV ++ F TGG+D+ + + D T + + Q L + + K
Sbjct: 609 LAVSARSNRFFYTGGADSKLIRFGDVTQVTRNEALDKRQAALEQEQTLHSLLHAQKQLHK 668
Query: 684 AIQVAFELRRPHKLFEL 700
A +A L +P F++
Sbjct: 669 AFVLALNLDKPKASFDI 685
Score = 247 (92.0 bits), Expect = 2.4e-17, P = 2.4e-17
Identities = 61/188 (32%), Positives = 97/188 (51%)
Query: 56 IEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKG-HDGPAIGMACHPSG 114
I+ DTIT LS + L ++ S +R+W L T K ++ WK H GP I + P G
Sbjct: 74 IDVEEDTITCFGLSQEH--LVTAHRSGLLRLWQLDTGKLVKLWKAQHKGPVIRVEFSPCG 131
Query: 115 GLLATAG-ADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVW 173
L+ T+G AD + +WD C K G ++FHP+ + +++G D TV W
Sbjct: 132 RLICTSGGADATLRLWDYSNNSCLGALKDFPGPAWLLVFHPNVLRKEIYAGGSDNTVYAW 191
Query: 174 DLLAKKCVATLDKHFSRVTSMAITSDGST---LISAGRDKVVNLWDLRDY--SCKLTV-P 227
+ K V + H S+VT ++ S+ S +++ RDKV+ +W L++ S +L V P
Sbjct: 192 NYETKTLVHKMRGHLSQVTGLSFKSNASDCNEIVTVSRDKVMIVWQLQEQLESKQLKVLP 251
Query: 228 TYEMVEAV 235
Y+ +E V
Sbjct: 252 LYDELEGV 259
Score = 148 (57.2 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 46/173 (26%), Positives = 78/173 (45%)
Query: 60 SDTITALALSPDDKLLFSS-GHSREIRVWDLSTLKCLR-SWK--------GHDGPAIGMA 109
+ TI +A++ + F+S ++VW L K R S+ HD +A
Sbjct: 426 TSTIGCVAMTHNGATGFASVSQDGSMKVWQLVRSKEDRNSYSFNLRYAALSHDKEVNCVA 485
Query: 110 CHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDAT 169
P+ L+ATA D+ VW + +GH V S+ F P D+ +L S SD T
Sbjct: 486 YAPNNKLIATASQDKTAKVWLAESNTLQGVLRGHTRGVWSVRFSP-VDQIVLTSSSD-CT 543
Query: 170 VRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSC 222
+R+W + C+ D+ + + G +ISA D ++ LW+++ +C
Sbjct: 544 LRIWSISNFSCIKRFDQECT-ILRAEFLDHGKFIISAASDGLLKLWNIKTNTC 595
Score = 87 (35.7 bits), Expect = 2.3e-74, Sum P(2) = 2.3e-74
Identities = 29/109 (26%), Positives = 46/109 (42%)
Query: 7 KKSYGCEPVLQQFYGGGPLVVSSDGSFIACACGESINIVDLSNASIKSTIEGGS------ 60
+KSY E FY GG + S +G + C G ++N VD+ + I ++ S
Sbjct: 7 EKSYAAEARYTNFYAGGDIAWSPNGHHLYCLNGSAVNQVDVQTSQILNSYGLSSPSADNK 66
Query: 61 -----DTI-----TALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWK 99
D I T + L ++ S +R+W L T K ++ WK
Sbjct: 67 RPAELDNIDVEEDTITCFGLSQEHLVTAHRSGLLRLWQLDTGKLVKLWK 115
>UNIPROTKB|I3LPF4 [details] [associations]
symbol:TBL3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005730 "nucleolus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 InterPro:IPR011044 SUPFAM:SSF50969
GeneTree:ENSGT00690000102183 Ensembl:ENSSSCT00000026390 OMA:LKDSFLV
Uniprot:I3LPF4
Length = 749
Score = 489 (177.2 bits), Expect = 1.7e-71, Sum P(2) = 1.7e-71
Identities = 126/360 (35%), Positives = 191/360 (53%)
Query: 343 LILSKRLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCL 402
L L K+ GY+EE+LD++FLG E ++ VA+N ++V++L + +C +L GH++IVL L
Sbjct: 309 LQLQKQFAGYSEEVLDVRFLGPENSHVVVASNSPCLKVFELQTSACQ-ILHGHTDIVLAL 367
Query: 403 DTCALSSGKILIVTGSKDNSVRLWDSESR---CCVGVGTGHMGAVGAVAFSKKLQNFLVS 459
D G L + +KD S+R+W CV G+GH +VG + S+ ++FLV+
Sbjct: 368 DV--FRKGW-LFASCAKDQSIRIWRINKAGLVACVAQGSGHTHSVGTICCSRLKESFLVT 424
Query: 460 GSSDHTIKVWSF-DGLSDDAEQPMN----LKAKAVVAAHGKDINSLAVAPNDSLVCTGS- 513
GS D T+K+W + L + P + L+A+A H D + G+
Sbjct: 425 GSQDCTVKLWPLPEALPSRSTAPDSGPVLLQAQATQRCH------------DKVTAHGTR 472
Query: 514 QDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKT 573
Q R L D F GH+RG+W V+FSP+DQV ++ GD I + +T
Sbjct: 473 QGRGRAFAGLGD------FSGHRRGLWCVQFSPMDQV-LSPPGD--ISTPPLPP----QT 519
Query: 574 FEGHTSSVLRASFLTR-----GAQIVSC---GADGLVKLWTVRTGECIATYDKHEDKIWA 625
FEGH +SVLR +F+++ G C G+DGLVKLWT+++ EC+ T D HEDK+W
Sbjct: 520 FEGHDASVLRVAFVSQLGTGPGLSASRCRPSGSDGLVKLWTIKSNECVRTLDAHEDKVWG 579
Query: 626 LAVGKKTEMFATGGSDALVNLWHDSTXXXXXXXXXXXXXXVLRGQELENAVLDADYTKAI 685
L + + T SD+ V LW D T V+R QEL+N + + Y +A+
Sbjct: 580 LHCSRLDDRALTAASDSRVILWKDVTEEEQAEEEARREEEVVRQQELDNLLHEKRYLRAL 639
Score = 288 (106.4 bits), Expect = 1.7e-71, Sum P(2) = 1.7e-71
Identities = 76/238 (31%), Positives = 117/238 (49%)
Query: 3 SLPLKKSYGCEPVLQQFYGGGPLVVSSDGSFIACACGESINIVDL-SNASIKSTIEGGSD 61
S PL SY E ++ FY GG + + G + C CG +NI+D+ S A ++S + +
Sbjct: 10 SPPLLSSYAIERKIEPFYKGGKVQLDQTGQHLFCVCGTRVNILDVASGAVLRSLEQEDQE 69
Query: 62 TITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAG 121
ITA L+ ++L ++ + + W +R WK A MA P+ LLAT G
Sbjct: 70 DITAFYLARGQEVLGTATRALLLAQWAWREGSIVRLWKAIHXAA--MAFDPTSTLLATVG 127
Query: 122 ADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCV 181
+ G + K H +++ PD + LLFS + DA++RVW L + C+
Sbjct: 128 LEGAAEARQGALGTPAPHLK-H--ILTG---GPDPARLLLFSSAADASIRVWSLQDRSCL 181
Query: 182 ATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYEMVEAVCAIP 239
A L H+S + A+ G S+GRDK+ +WDL+ TVP +E VEA +P
Sbjct: 182 AVLTAHYS-AAAQALAGAGGH--SSGRDKICTVWDLQSLQATKTVPVFESVEAAVLLP 236
Score = 279 (103.3 bits), Expect = 7.0e-21, P = 7.0e-21
Identities = 96/325 (29%), Positives = 153/325 (47%)
Query: 203 LISAGRDKVVNLWDLRDYSCKLTVPTYEMVEAVCAIPPG---SAFDSFLSSYNQQTIKKK 259
L S+ D + +W L+D SC + + A G S D + ++ Q+++
Sbjct: 161 LFSSAADASIRVWSLQDRSCLAVLTAHYSAAAQALAGAGGHSSGRDKICTVWDLQSLQAT 220
Query: 260 R-----RSLEIHFITVGE--------------RGIVRMWNADSA-CLYEQKSSDVTISFE 299
+ S+E + E GI+R+W A S C++ Q
Sbjct: 221 KTVPVFESVEAAVLLPEEPAPELGVTQQPPTPTGILRVWEAASGQCVHAQP--------R 272
Query: 300 MDDSKRGFTAATVLPSNQGL-LCVTADQQLLLYTTVEVPEKKMELILSKRLVGYNEEILD 358
+ + T L GL L VTAD LLLY E + L L K+ GY+EE+LD
Sbjct: 273 LPGPGQELTHCA-LARAAGLRLSVTADHNLLLY------EAR-SLQLQKQFAGYSEEVLD 324
Query: 359 LKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGS 418
++FLG E ++ VA+N ++V++L + +C +L GH++IVL LD G L + +
Sbjct: 325 VRFLGPENSHVVVASNSPCLKVFELQTSACQ-ILHGHTDIVLALDV--FRKGW-LFASCA 380
Query: 419 KDNSVRLWDSESR---CCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSF-DGL 474
KD S+R+W CV G+GH +VG + S+ ++FLV+GS D T+K+W + L
Sbjct: 381 KDQSIRIWRINKAGLVACVAQGSGHTHSVGTICCSRLKESFLVTGSQDCTVKLWPLPEAL 440
Query: 475 SDDAEQPMN----LKAKAVVAAHGK 495
+ P + L+A+A H K
Sbjct: 441 PSRSTAPDSGPVLLQAQATQRCHDK 465
Score = 44 (20.5 bits), Expect = 8.3e-46, Sum P(2) = 8.3e-46
Identities = 22/92 (23%), Positives = 41/92 (44%)
Query: 246 SFLSSYNQQTIKKKRRSLEIHFITVGERGIVRMWNA--DSACLYEQKSSDV-TISFEMDD 302
+F + Q+ + R+L + E IVR+W A +A ++ S+ + T+ E
Sbjct: 73 AFYLARGQEVLGTATRALLLAQWAWREGSIVRLWKAIHXAAMAFDPTSTLLATVGLEGAA 132
Query: 303 SKRGFTAATVLPSNQGLLCVTADQ-QLLLYTT 333
R T P + +L D +LLL+++
Sbjct: 133 EARQGALGTPAPHLKHILTGGPDPARLLLFSS 164
>POMBASE|SPCC16A11.02 [details] [associations]
symbol:utp13 "U3 snoRNP-associated protein Utp13
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0005730
"nucleolus" evidence=IEA] [GO:0005732 "small nucleolar
ribonucleoprotein complex" evidence=ISO] [GO:0030490 "maturation of
SSU-rRNA" evidence=ISO] [GO:0030515 "snoRNA binding" evidence=ISO]
[GO:0032040 "small-subunit processome" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR013934
InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 PomBase:SPCC16A11.02 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329672 GenomeReviews:CU329672_GR
GO:GO:0030515 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0032040 GO:GO:0030490 GO:GO:0005732 HOGENOM:HOG000188765
KO:K14555 OMA:HHFRGSP PIR:T41075 RefSeq:NP_587989.2
ProteinModelPortal:Q9USN3 STRING:Q9USN3 EnsemblFungi:SPCC16A11.02.1
GeneID:2539337 KEGG:spo:SPCC16A11.02 OrthoDB:EOG4DZ53K
NextBio:20800502 Uniprot:Q9USN3
Length = 777
Score = 701 (251.8 bits), Expect = 3.8e-69, P = 3.8e-69
Identities = 197/668 (29%), Positives = 324/668 (48%)
Query: 66 LALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRK 125
+A ++K+L ++ R I + + K D +A L A R
Sbjct: 25 VAFDSNEKILVTALTDRIIGTRSETGERLFSIKKDEDDYVTALAITSDSKKLIAAFRSRL 84
Query: 126 VLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLD 185
+ ++++ G K H+ V ++ P +LL +G + V+VWD+ +
Sbjct: 85 LTIYEIPSGRRIKSMKAHETPVITMTIDPTN--TLLATGGAEGLVKVWDIAGAYVTHSFR 142
Query: 186 KHFSRVTSMAITSDGST--LISAGRDKVVNLWDLRDYSCKLTVPTYEMVEAVCAIPPGSA 243
H ++++ +T L S D V LWDL + V P +
Sbjct: 143 GHGGVISALCFGKHQNTWVLASGADDSRVRLWDLNSSRSMAVFEGHSSVIRGLTFEPTGS 202
Query: 244 FDSFLSSYNQQTIK----KKR---RSLEIHFITVGERGIVRMWNADSACLYEQKSSDVTI 296
F LS +T++ KKR R++ + F +V G V + LY ++ +
Sbjct: 203 F--LLSGSRDKTVQVWNIKKRSAVRTIPV-FHSVEAIGWVN-GQPEEKILYTAGEGNLIL 258
Query: 297 SFE------MD---DSKRGFTAAT--VLP-SNQGLLCVTADQQLLLYTTVEVPEKKMELI 344
+++ +D D+ T A V+P S LL V +D LLL VP + I
Sbjct: 259 AWDWKSGSRLDPGVDTTHSETNAIIQVVPFSENTLLSVHSDLSLLLRK--RVPGEGF--I 314
Query: 345 LSKRLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDT 404
K+L G +E++D ++G++ +LAV +N E + V VL GH++IVL LD+
Sbjct: 315 TIKKLNGSFDEVIDCAWIGDD--HLAVCSNTEFIDVISTDGTQVFGVLEGHTDIVLTLDS 372
Query: 405 CALSSGKILIVTGSKDNSVRLWDS--ESRC--CVGVGTGHMGAVGAVAFSKKLQN----F 456
S + + TG+KDN+VRLW+ E C+ V TGH +V AVA N F
Sbjct: 373 ---SEDGVWLATGAKDNTVRLWNLNIEDNVYKCIHVFTGHTASVTAVALGPLDVNGYPTF 429
Query: 457 LVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDR 516
L S S D T+K ++ + ++ + +A + AH +D+N++ V+ + ++ + SQD+
Sbjct: 430 LASSSQDRTLKRFNLGSQLNKSD--FSNRAVWTIKAHDRDVNAIQVSKDGRIIASASQDK 487
Query: 517 TACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEG 576
T +W V RGH+RG+W+ F+P + + + SGD+TI+IW++ C++T EG
Sbjct: 488 TIKLWDSSTGEVVGVLRGHRRGVWACSFNPFSRQLASGSGDRTIRIWNVDTQQCVQTLEG 547
Query: 577 HTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFA 636
HT ++L+ ++++G Q+VS ADGLVK+W++ +GEC+AT D HED++WALA +
Sbjct: 548 HTGAILKLIYISQGTQVVSAAADGLVKVWSLSSGECVATLDNHEDRVWALASRFDGSLLV 607
Query: 637 TGGSDALVNLWHDSTXXXXXXXXXXXXXXVLRGQELENAVLDADYTKAIQVAFELRRPHK 696
+GG+DA+V++W D T V Q L N D+ +AI +A L RPH
Sbjct: 608 SGGADAVVSVWKDVTEEYIAKQAEELERRVEAEQLLSNFEQTEDWQQAIALALSLDRPHG 667
Query: 697 LFELFASV 704
L LF V
Sbjct: 668 LLRLFERV 675
Score = 379 (138.5 bits), Expect = 1.2e-31, Sum P(2) = 1.2e-31
Identities = 78/236 (33%), Positives = 131/236 (55%)
Query: 1 MASLPLKKSYGCEPVLQQFYGGGPLVVSSDGSFIACACGESI-NIVDLSNASIKSTIEGG 59
MA + KK + E ++ Y GGP+ S+ + A + I + + S +
Sbjct: 1 MAPIGEKKRFELEKSIEPIYTGGPVAFDSNEKILVTALTDRIIGTRSETGERLFSIKKDE 60
Query: 60 SDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLAT 119
D +TALA++ D K L ++ SR + ++++ + + ++S K H+ P I M P+ LLAT
Sbjct: 61 DDYVTALAITSDSKKLIAAFRSRLLTIYEIPSGRRIKSMKAHETPVITMTIDPTNTLLAT 120
Query: 120 AGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKK 179
GA+ V VWD+ G + TH F+GH GV+S++ F + +L SG+DD+ VR+WDL + +
Sbjct: 121 GGAEGLVKVWDIAGAYVTHSFRGHGGVISALCFGKHQNTWVLASGADDSRVRLWDLNSSR 180
Query: 180 CVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYEMVEAV 235
+A + H S + + GS L+S RDK V +W+++ S T+P + VEA+
Sbjct: 181 SMAVFEGHSSVIRGLTFEPTGSFLLSGSRDKTVQVWNIKKRSAVRTIPVFHSVEAI 236
Score = 273 (101.2 bits), Expect = 1.1e-19, Sum P(2) = 1.1e-19
Identities = 62/198 (31%), Positives = 104/198 (52%)
Query: 39 GESINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSW 98
G +N D SN ++ TI+ + A+ +S D +++ S+ + I++WD ST + +
Sbjct: 445 GSQLNKSDFSNRAVW-TIKAHDRDVNAIQVSKDGRIIASASQDKTIKLWDSSTGEVVGVL 503
Query: 99 KGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDK 158
+GH + +P LA+ DR + +W+VD C +GH G + +++ +
Sbjct: 504 RGHRRGVWACSFNPFSRQLASGSGDRTIRIWNVDTQQCVQTLEGHTGAILKLIYI--SQG 561
Query: 159 SLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLW-DL 217
+ + S + D V+VW L + +CVATLD H RV ++A DGS L+S G D VV++W D+
Sbjct: 562 TQVVSAAADGLVKVWSLSSGECVATLDNHEDRVWALASRFDGSLLVSGGADAVVSVWKDV 621
Query: 218 -RDYSCKLTVPTYEMVEA 234
+Y K VEA
Sbjct: 622 TEEYIAKQAEELERRVEA 639
Score = 138 (53.6 bits), Expect = 5.2e-05, Sum P(2) = 5.2e-05
Identities = 46/214 (21%), Positives = 84/214 (39%)
Query: 30 DGSFIACACGESINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWDL 89
D C+ E I+++ + +EG +D + L S D L + +R+W+L
Sbjct: 334 DDHLAVCSNTEFIDVISTDGTQVFGVLEGHTDIVLTLDSSEDGVWLATGAKDNTVRLWNL 393
Query: 90 S----TLKCLRSWKGHDGPAIGMACHP---SG--GLLATAGADRKVLVWDVDGGFCTHYF 140
+ KC+ + GH +A P +G LA++ DR + +++ F
Sbjct: 394 NIEDNVYKCIHVFTGHTASVTAVALGPLDVNGYPTFLASSSQDRTLKRFNLGSQLNKSDF 453
Query: 141 KGHKGVVSSILFHP--------DTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVT 192
V +I H D ++ S S D T+++WD + V L H V
Sbjct: 454 SNR--AVWTIKAHDRDVNAIQVSKDGRIIASASQDKTIKLWDSSTGEVVGVLRGHRRGVW 511
Query: 193 SMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTV 226
+ + L S D+ + +W++ C T+
Sbjct: 512 ACSFNPFSRQLASGSGDRTIRIWNVDTQQCVQTL 545
Score = 43 (20.2 bits), Expect = 1.2e-31, Sum P(2) = 1.2e-31
Identities = 15/61 (24%), Positives = 31/61 (50%)
Query: 475 SDDAEQPMNLKAKAVVAAHG--KDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTF 532
++D +Q + L A ++ HG + + AP+ TG++D + +LPD ++ F
Sbjct: 649 TEDWQQAIAL-ALSLDRPHGLLRLFERVMTAPHQPNSITGNKDVDNVLVQLPDHQLIILF 707
Query: 533 R 533
+
Sbjct: 708 Q 708
>WB|WBGene00013143 [details] [associations]
symbol:Y53C12B.1 species:6239 "Caenorhabditis elegans"
[GO:0006364 "rRNA processing" evidence=IEA] [GO:0032040
"small-subunit processome" evidence=IEA] [GO:0040010 "positive
regulation of growth rate" evidence=IMP] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0006898
"receptor-mediated endocytosis" evidence=IMP] [GO:0007126 "meiosis"
evidence=IMP] [GO:0045132 "meiotic chromosome segregation"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR013934 InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0009792
GO:GO:0006898 GO:GO:0040010 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045132 GO:GO:0006364
HSSP:P16649 GO:GO:0032040 EMBL:Z99278 KO:K14555 OMA:HHFRGSP
GeneTree:ENSGT00690000102183 PIR:T27133 RefSeq:NP_496100.1
UniGene:Cel.13957 ProteinModelPortal:O18215 SMR:O18215
STRING:O18215 PaxDb:O18215 EnsemblMetazoa:Y53C12B.1 GeneID:190203
KEGG:cel:CELE_Y53C12B.1 UCSC:Y53C12B.1 CTD:190203
WormBase:Y53C12B.1 HOGENOM:HOG000016188 InParanoid:O18215
NextBio:944956 Uniprot:O18215
Length = 793
Score = 438 (159.2 bits), Expect = 2.4e-56, Sum P(2) = 2.4e-56
Identities = 128/459 (27%), Positives = 224/459 (48%)
Query: 266 HFITVGERGIVRMWNADSACLYEQKSSDVTISFEMDDSKRGFTAATVLPSNQGLLCVTAD 325
+ TVGE G+V+ + ++A L +K S +D A V+ SN+ L ++A+
Sbjct: 248 NLFTVGEEGVVKEFVIETAKLVRKKR---IASSNLDH-----LAYDVV-SNR-FLAISAE 297
Query: 326 QQLLL--YTTVEVPEKKM---ELILSKRLVGYNEEILDLKF-LGEEEQYLAVATNIEQVQ 379
Q L++ + +++ + + + I S L+G +E + + E Y + + ++
Sbjct: 298 QNLIILDFENLKIARQIVGFHDEIYSCCLLGKDESHMAVASNTSEIRLYNTKTLDCQLIR 357
Query: 380 VYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKIL--IVTGSKDNSVRLWDSESRCCVGVG 437
+ S +S V++ + L L +C+ + I +VT +++S + V
Sbjct: 358 GHTESVLS---VVSPTWDTSL-LASCSKDNSIIFWRLVTSPENDSC-----STLVPVAAA 408
Query: 438 TGHMGAVGAVAFSKKLQN-FLVSGSSDHTIKVWSF-----------DGLSDDAEQPMNLK 485
TGH V A+A S + FL S S+D TIK+W D D EQ L
Sbjct: 409 TGHANTVTALAISNTGRAPFLASVSTDCTIKLWGLGVSTKLKEVKIDAEKDFVEQLPKLT 468
Query: 486 AKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLP----DLVSVVTFRGHKRGIWS 541
+ + AHGKD+N + ++ +D+L+ TG D+ +W++ L T GH+RG+
Sbjct: 469 CSSTMVAHGKDVNCVDISESDALIATGGMDKLVKLWQVDTHKMQLGIAGTLSGHRRGVGD 528
Query: 542 VEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGL 601
V+F+ + + SGD TIKIW+IS+ SCL+T GH+ +V R F +Q++S + G+
Sbjct: 529 VKFAKNSHKLASCSGDMTIKIWNISEKSCLQTISGHSCAVFRVIFARNDSQLISADSAGI 588
Query: 602 VKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLWHDSTXXXXXXXXXX 661
+K+WT++T +C + D H DKIW+L+ F T G+D + +W D T
Sbjct: 589 IKIWTIKTADCECSIDAHTDKIWSLSKNHNESEFVTAGTDGRIVVWKDVTEEKQKAEDNK 648
Query: 662 XXXXVLRGQELENAVLDADYTKAIQVAFELRRPHKLFEL 700
+ + Q L N + Y++A+ A L +P F++
Sbjct: 649 RREAIEQDQTLTNLLSQKRYSEALVFALTLAKPFCAFKV 687
Score = 212 (79.7 bits), Expect = 2.4e-56, Sum P(2) = 2.4e-56
Identities = 67/241 (27%), Positives = 116/241 (48%)
Query: 5 PLKKSYGCEPVLQQFYGGGPLVVSSDGSFIACACGESINIVDLSNASIKSTIEGGSDT-- 62
P+K+ + ++ Y GG + S++G + C + ++DL++ + TI D
Sbjct: 4 PIKE-IAAKRSVEAVYTGGTVRWSANGQKLFSTCTNVVKVIDLADNTASYTIGDPEDELR 62
Query: 63 ITALALSPDDKLLFSSGHSREIRVW----DLSTLK--CLRSWKG-HDGPAIGMACHPSGG 115
IT A+ + L + +++ IR + D ST K R+WK H P + M + G
Sbjct: 63 ITCTAVDKNRNRLLVAYNNQIIREYSIPLDPSTTKPELARTWKTIHTAPILVMEFNEEGH 122
Query: 116 LLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDL 175
LLAT AD V VW++ CTH KG VVS+ILF +K L G + + ++++
Sbjct: 123 LLATGSADHIVKVWNLTEQQCTHTLKG-PSVVSAILFGKH-EK--LVVGYIEGQLNLYNI 178
Query: 176 LA---KKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYEMV 232
+ KK V T H S +T++ D +++ RD+ +++ + +P YE +
Sbjct: 179 MRGAPKKLVNTWKSHNSHITALLQVPDSRVVVALSRDQTMSIHETETQETLRVLPLYESI 238
Query: 233 E 233
E
Sbjct: 239 E 239
Score = 150 (57.9 bits), Expect = 8.1e-07, P = 8.1e-07
Identities = 50/205 (24%), Positives = 85/205 (41%)
Query: 34 IACACGES--INIVDLSNASIKSTIEGGSD--TITALALSPDDKLLFSSGHSREIRVWDL 89
+A A G + + + +SN + S TI L KL + + V L
Sbjct: 405 VAAATGHANTVTALAISNTGRAPFLASVSTDCTIKLWGLGVSTKLKEVKIDAEKDFVEQL 464
Query: 90 STLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDG-----GFCTHYFKGHK 144
L C + H + S L+AT G D+ V +W VD G GH+
Sbjct: 465 PKLTCSSTMVAHGKDVNCVDISESDALIATGGMDKLVKLWQVDTHKMQLGIAGT-LSGHR 523
Query: 145 GVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLI 204
V + F ++ K L S S D T+++W++ K C+ T+ H V + + S LI
Sbjct: 524 RGVGDVKFAKNSHK--LASCSGDMTIKIWNISEKSCLQTISGHSCAVFRVIFARNDSQLI 581
Query: 205 SAGRDKVVNLWDLRDYSCKLTVPTY 229
SA ++ +W ++ C+ ++ +
Sbjct: 582 SADSAGIIKIWTIKTADCECSIDAH 606
Score = 146 (56.5 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 34/176 (19%), Positives = 73/176 (41%)
Query: 44 IVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKC----LRSWK 99
+ L + ST+ + + +S D L+ + G + +++W + T K +
Sbjct: 461 VEQLPKLTCSSTMVAHGKDVNCVDISESDALIATGGMDKLVKLWQVDTHKMQLGIAGTLS 520
Query: 100 GHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKS 159
GH + + LA+ D + +W++ C GH V ++F + S
Sbjct: 521 GHRRGVGDVKFAKNSHKLASCSGDMTIKIWNISEKSCLQTISGHSCAVFRVIFA--RNDS 578
Query: 160 LLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLW 215
L S +++W + C ++D H ++ S++ + S ++AG D + +W
Sbjct: 579 QLISADSAGIIKIWTIKTADCECSIDAHTDKIWSLSKNHNESEFVTAGTDGRIVVW 634
Score = 131 (51.2 bits), Expect = 9.2e-05, P = 9.2e-05
Identities = 72/355 (20%), Positives = 138/355 (38%)
Query: 187 HFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYEMVEAVCAIPPGSAFDS 246
H + + M +G L + D +V +W+L + C T+ +V A+
Sbjct: 108 HTAPILVMEFNEEGHLLATGSADHIVKVWNLTEQQCTHTLKGPSVVSAI----------- 156
Query: 247 FLSSYNQQTIKKKRRSLEIHFITVGE-RGIVRMW---NADSACLYEQKSSDVTISFEMDD 302
+ + + L ++ I G + +V W N+ L + S V ++ D
Sbjct: 157 LFGKHEKLVVGYIEGQLNLYNIMRGAPKKLVNTWKSHNSHITALLQVPDSRVVVALSRDQ 216
Query: 303 SKRGFTAAT-----VLPSNQGLLCVTADQQLLLYTTVE---VPEKKME---LILSKRLVG 351
+ T VLP + + L+T E V E +E L+ KR+
Sbjct: 217 TMSIHETETQETLRVLPLYESIEGGAIGHNGNLFTVGEEGVVKEFVIETAKLVRKKRIAS 276
Query: 352 YNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAG-HSEIVLCLDTCALSSG 410
N + L + ++LA++ + + + D ++ + + G H EI C C L
Sbjct: 277 SNLDHLAYDVVSN--RFLAISAE-QNLIILDFENLKIARQIVGFHDEIYSC---CLLGKD 330
Query: 411 KILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWS 470
+ + S + +RL+++++ C + GH +V +V + L S S D++I W
Sbjct: 331 ESHMAVASNTSEIRLYNTKTLDCQLI-RGHTESVLSVVSPTWDTSLLASCSKDNSIIFWR 389
Query: 471 FDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDS--LVCTGSQDRTACVWRL 523
S + + L A H + +LA++ + + S D T +W L
Sbjct: 390 LV-TSPENDSCSTLVPVAAATGHANTVTALAISNTGRAPFLASVSTDCTIKLWGL 443
Score = 127 (49.8 bits), Expect = 0.00025, P = 0.00025
Identities = 49/207 (23%), Positives = 92/207 (44%)
Query: 26 VVSSDGSFIACACGESINIVDLSNASIKSTIEGGSDTI-TALALSPDDKLLFSSGHSREI 84
VVS+ F+A + +++ I+D N I I G D I + L D+ + + ++ EI
Sbjct: 286 VVSN--RFLAISAEQNLIILDFENLKIARQIVGFHDEIYSCCLLGKDESHMAVASNTSEI 343
Query: 85 RVWDLSTLKCLRSWKGHDGPAIGMACHP-SGGLLATAGADRKVLVWDV----DGGFCTHY 139
R+++ TL C + +GH + + LLA+ D ++ W + + C+
Sbjct: 344 RLYNTKTLDC-QLIRGHTESVLSVVSPTWDTSLLASCSKDNSIIFWRLVTSPENDSCSTL 402
Query: 140 FK-----GHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDL-LAKKCVAT-LDKHFSRVT 192
GH V+++ L S S D T+++W L ++ K +D V
Sbjct: 403 VPVAAATGHANTVTALAISNTGRAPFLASVSTDCTIKLWGLGVSTKLKEVKIDAEKDFVE 462
Query: 193 SMAITSDGSTLISAGRDKVVNLWDLRD 219
+ + ST+++ G+D VN D+ +
Sbjct: 463 QLPKLTCSSTMVAHGKD--VNCVDISE 487
Score = 124 (48.7 bits), Expect = 0.00052, P = 0.00052
Identities = 74/426 (17%), Positives = 167/426 (39%)
Query: 75 LFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGG 134
LF+ G ++ + + T K +R + +A A++ +++ D +
Sbjct: 249 LFTVGEEGVVKEFVIETAKLVRKKRIASSNLDHLAYDVVSNRFLAISAEQNLIILDFENL 308
Query: 135 FCTHYFKG-HKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTS 193
G H + S L D+S + S+ + +R+++ C + H V S
Sbjct: 309 KIARQIVGFHDEIYSCCLL--GKDESHMAVASNTSEIRLYNTKTLDC-QLIRGHTESVLS 365
Query: 194 MAI-TSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYEMVEAVCAIPPGSAFDSFLSSYN 252
+ T D S L S +D + W L +T P + + + P +A ++
Sbjct: 366 VVSPTWDTSLLASCSKDNSIIFWRL------VTSPEND---SCSTLVPVAAATGHANTVT 416
Query: 253 QQTIKKKRRSLEIHFITVGERGIVRMWNADSACLYEQKSSDVTISFEMDDSKRGFTAATV 312
I R+ + +V +++W + ++ D F ++ + ++T+
Sbjct: 417 ALAISNTGRAPFL--ASVSTDCTIKLWGLGVSTKLKEVKIDAEKDF-VEQLPKLTCSSTM 473
Query: 313 LPSNQGLLCVTADQQLLLYTTV---------EVPEKKMELILSKRLVGYNEEILDLKFLG 363
+ + + CV + L T +V KM+L ++ L G+ + D+KF
Sbjct: 474 VAHGKDVNCVDISESDALIATGGMDKLVKLWQVDTHKMQLGIAGTLSGHRRGVGDVKF-A 532
Query: 364 EEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSV 423
+ LA + ++++++S SC ++GHS V + + +++ +
Sbjct: 533 KNSHKLASCSGDMTIKIWNISEKSCLQTISGHSCAVFRV---IFARNDSQLISADSAGII 589
Query: 424 RLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMN 483
++W ++ C H + +++ + F+ +G+ D I VW D + + N
Sbjct: 590 KIWTIKTADCECSIDAHTDKIWSLSKNHNESEFVTAGT-DGRIVVWK-DVTEEKQKAEDN 647
Query: 484 LKAKAV 489
+ +A+
Sbjct: 648 KRREAI 653
Score = 42 (19.8 bits), Expect = 1.8e-38, Sum P(2) = 1.8e-38
Identities = 17/64 (26%), Positives = 30/64 (46%)
Query: 197 TSDGSTLISAGRDKVVNLWDLRDYSCKLTV--PTYEMVEAVCAIPPGSAFDSFLSSYNQQ 254
+++G L S + VV + DL D + T+ P E+ A+ + L +YN Q
Sbjct: 26 SANGQKLFSTCTN-VVKVIDLADNTASYTIGDPEDELRITCTAVDKNR--NRLLVAYNNQ 82
Query: 255 TIKK 258
I++
Sbjct: 83 IIRE 86
>ASPGD|ASPL0000073843 [details] [associations]
symbol:AN4460 species:162425 "Emericella nidulans"
[GO:0032040 "small-subunit processome" evidence=IEA] [GO:0006364
"rRNA processing" evidence=IEA] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR013934 InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003676 EMBL:BN001303
GO:GO:0006364 GO:GO:0032040 EMBL:AACD01000077 HOGENOM:HOG000188765
KO:K14555 OMA:HHFRGSP OrthoDB:EOG4DZ53K RefSeq:XP_662064.1
ProteinModelPortal:Q5B4S0 STRING:Q5B4S0
EnsemblFungi:CADANIAT00005992 GeneID:2872260 KEGG:ani:AN4460.2
Uniprot:Q5B4S0
Length = 977
Score = 305 (112.4 bits), Expect = 5.7e-49, Sum P(2) = 5.7e-49
Identities = 75/190 (39%), Positives = 103/190 (54%)
Query: 428 SESRCCVGVGTGHMGAVGAVAFS-----------KKLQN----FLVSGSSDHTIKVWSFD 472
+ S C + TGH ++GA++F K N F+++GS D T+K W+
Sbjct: 465 NSSYTCFALLTGHAESLGAISFPRDSPPPDTPAYKAPVNHPPPFVITGSQDRTVKRWNVG 524
Query: 473 GLSDD-AEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVT 531
L +P KA AH KDIN+L V+P+ +L + SQDRT +W D V
Sbjct: 525 KLGPTIGNKPHTPKALFTRKAHDKDINALDVSPSSALFASASQDRTVKIWSADDGSVVGV 584
Query: 532 FRGHKRGIWSVEFSP-------VDQ-------VVITASGDKTIKIWSISDGSCLKTFEGH 577
RGHKRG+WS FSP D +++T SGDKT+K+WS+SD SCL TFEGH
Sbjct: 585 LRGHKRGVWSARFSPKGTPILSADAKSSTNRGMIVTGSGDKTVKLWSLSDYSCLLTFEGH 644
Query: 578 TSSVLRASFL 587
T+SVL+ +L
Sbjct: 645 TNSVLKVLWL 654
Score = 292 (107.8 bits), Expect = 5.7e-49, Sum P(2) = 5.7e-49
Identities = 107/417 (25%), Positives = 185/417 (44%)
Query: 1 MASLPLKKSYGCEPVLQQFYGGGPLVVSSDGSFIACACGESINIVDLSNASIKSTIEGGS 60
M+ +K ++ L+ Y GG + + G + E +VDL + +T++G
Sbjct: 1 MSKAVVKTTFEASRTLRPIYTGGSTALDASGRLLVACVNEDALVVDLETGNQLATLDGDG 60
Query: 61 DTITALALSPDDKLLFSSGHSREIRVWDLS-------TL--KCLRSWKGHDGPAIGMACH 111
+ IT+LA++P + S +R++ LS TL K +RS K H P + A
Sbjct: 61 EVITSLAITPSASHVILCSRSMSMRIYSLSQYEDTTPTLETKLVRSLKPHTAPVVTTATD 120
Query: 112 PSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSI-LFHPDTDKSLLFSGSDDATV 170
+G LLAT AD + VWD+ GG+ TH F GH GV+S++ F P T + S
Sbjct: 121 STGTLLATGAADGSIKVWDIRGGYITHSFHGHGGVISALCFFQPPTAEHDGKLSSKKKPK 180
Query: 171 RVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDK-VVNLWDLRDYSCKLTVPTY 229
R + D + S A S+G+ +++G ++ V +WDL ++ ++
Sbjct: 181 RKTGMAGDDD----DNEMMDLDS-ASNSNGAFRLASGSEEGKVRVWDLNKKKSIASLDSH 235
Query: 230 EMVEAVCAIPPGSAFDSFLSS--------YNQQTIKKKR-----RSLEI-HFITVG---- 271
V V ++ ++ LS+ ++ +T K +R S E F+ G
Sbjct: 236 --VSVVRSLSYSLTENALLSAGRDKTVIVWDMRTFKTRRIIPVLESAEAASFVAEGGLCL 293
Query: 272 ---ERGIVRMWNADSACLYEQKSSDVTISFEMDDSKRGFTAATVLPSNQGLLCVTADQQL 328
E G +R+W+ C + +VT E A P + V ADQ L
Sbjct: 294 VGGEYGRLRVWD----C---NRGGEVTGDQEAAPEFEAIIAIHYTPGMSFAMTVHADQTL 346
Query: 329 LLYTTVEVPEKKM-----ELILSKRLVGYNEEILDLKFLGEEEQYLAVATNIEQVQV 380
L++ + K L + +R+ G +++I+DL ++G + LA+ATN E +++
Sbjct: 347 RLHSLEPLSNLKPGTTIDPLPVVRRISGNDDDIIDLAYVGPDRSMLALATNTESIRI 403
Score = 207 (77.9 bits), Expect = 1.4e-38, Sum P(2) = 1.4e-38
Identities = 90/369 (24%), Positives = 155/369 (42%)
Query: 384 SSMSCSYVLAGHSEIVLCL---------DTCA----LSSGKILIVTGSKDNSVRLWDSES 430
SS +C +L GH+E + + DT A ++ ++TGS+D +V+ W+
Sbjct: 466 SSYTCFALLTGHAESLGAISFPRDSPPPDTPAYKAPVNHPPPFVITGSQDRTVKRWNVGK 525
Query: 431 RCCVGVGTGHMGAVGAVAFSKKLQN-------------FLVSGSSDHTIKVWSFDGLSDD 477
+G G+ F++K + S S D T+K+WS +DD
Sbjct: 526 ---LGPTIGNKPHTPKALFTRKAHDKDINALDVSPSSALFASASQDRTVKIWS----ADD 578
Query: 478 AEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKR 537
V+ H + + S +P + + S D + R +VT G K
Sbjct: 579 GS------VVGVLRGHKRGVWSARFSPKGTPIL--SADAKSSTNR----GMIVTGSGDKT 626
Query: 538 -GIWSV-EFSPVDQVVITASG--DKTIKI-WSISDGSCLKTF--EGHTSSVLRASFLTRG 590
+WS+ ++S ++T G + +K+ W KT E ++ + + +
Sbjct: 627 VKLWSLSDYS----CLLTFEGHTNSVLKVLWLPPPDMSSKTEDEEDEDAAASKPNSIQLR 682
Query: 591 AQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALA--------------VGKKTEMFA 636
+ S ADGLVK+W+ TGE T D H D++WALA K T +A
Sbjct: 683 PLVASAAADGLVKIWSPYTGELETTLDNHTDRVWALASPTPSGTRDDVNSSATKSTSPYA 742
Query: 637 --TGGSDALVNLWHDSTXXXXXXXXXXXXXXVLRGQELENAVLDADYTKAIQVAFELRRP 694
+G +D+ V W D+T + + Q+L+N ++ Y +AI +A +L P
Sbjct: 743 IASGSADSTVTFWTDTTSATYTAAVNANSARIEQDQQLQNYIVAGAYREAITLALQLNHP 802
Query: 695 HKLFELFAS 703
+L LF++
Sbjct: 803 ARLLSLFSA 811
Score = 172 (65.6 bits), Expect = 2.3e-36, Sum P(2) = 2.3e-36
Identities = 59/203 (29%), Positives = 96/203 (47%)
Query: 271 GERGIVRMWNADSACLYEQKSSDVTISFEMDDSKRGFTAATVLPSNQGLLCVTADQQLLL 330
GE G +R+W+ C + +VT E A P + V ADQ L L
Sbjct: 296 GEYGRLRVWD----C---NRGGEVTGDQEAAPEFEAIIAIHYTPGMSFAMTVHADQTLRL 348
Query: 331 YTTVEVPEKKM-----ELILSKRLVGYNEEILDLKFLGEEEQYLAVATNIEQVQV----- 380
++ + K L + +R+ G +++I+DL ++G + LA+ATN E +++
Sbjct: 349 HSLEPLSNLKPGTTIDPLPVVRRISGNDDDIIDLAYVGPDRSMLALATNTESIRIVSVGP 408
Query: 381 --YDLSSMSCSYV------LAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLW----DS 428
Y S+ Y L GH +I++C+D SG L TG+KDN+ RLW +
Sbjct: 409 SDYRPSTDGQEYFGADIAHLDGHDDIIICIDVDW--SGHWL-ATGAKDNTARLWRLDPQN 465
Query: 429 ESRCCVGVGTGHMGAVGAVAFSK 451
S C + TGH ++GA++F +
Sbjct: 466 SSYTCFALLTGHAESLGAISFPR 488
Score = 140 (54.3 bits), Expect = 2.2e-05, Sum P(2) = 2.2e-05
Identities = 36/113 (31%), Positives = 51/113 (45%)
Query: 91 TLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSI 150
T K L + K HD + PS L A+A DR V +W D G +GHK V S
Sbjct: 536 TPKALFTRKAHDKDINALDVSPSSALFASASQDRTVKIWSADDGSVVGVLRGHKRGVWSA 595
Query: 151 LFHP------------DTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRV 191
F P T++ ++ +GS D TV++W L C+ T + H + V
Sbjct: 596 RFSPKGTPILSADAKSSTNRGMIVTGSGDKTVKLWSLSDYSCLLTFEGHTNSV 648
Score = 130 (50.8 bits), Expect = 0.00015, P = 0.00015
Identities = 49/212 (23%), Positives = 87/212 (41%)
Query: 404 TCALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSD 463
T A S L+ TG+ D S+++WD GH G + A+ F + +++
Sbjct: 116 TTATDSTGTLLATGAADGSIKVWDIRGGYITHSFHGHGGVISALCFFQP-------PTAE 168
Query: 464 HTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKD--INSLAVAPNDS---LVCTGSQDRTA 518
H DG ++P K K +A D + L A N + + +GS++
Sbjct: 169 H-------DGKLSSKKKP---KRKTGMAGDDDDNEMMDLDSASNSNGAFRLASGSEEGKV 218
Query: 519 CVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHT 578
VW L S+ + H + S+ +S + +++A DKT+ +W + +
Sbjct: 219 RVWDLNKKKSIASLDSHVSVVRSLSYSLTENALLSAGRDKTVIVWDMRTFKTRRIIPV-L 277
Query: 579 SSVLRASFLTRGAQIVSCGADGLVKLWTVRTG 610
S ASF+ G + G G +++W G
Sbjct: 278 ESAEAASFVAEGGLCLVGGEYGRLRVWDCNRG 309
Score = 58 (25.5 bits), Expect = 5.5e-23, Sum P(2) = 5.5e-23
Identities = 16/44 (36%), Positives = 23/44 (52%)
Query: 509 VCTGSQDRTACVWRL-PDLVSVVTFR---GHKRGIWSVEFSPVD 548
+ TG++D TA +WRL P S F GH + ++ F P D
Sbjct: 447 LATGAKDNTARLWRLDPQNSSYTCFALLTGHAESLGAISF-PRD 489
Score = 57 (25.1 bits), Expect = 7.0e-23, Sum P(2) = 7.0e-23
Identities = 22/76 (28%), Positives = 29/76 (38%)
Query: 574 FEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRT--GECIATYDKHEDKIWALAVGKK 631
+ G S+L + T +IVS G + G IA D H+D I + V
Sbjct: 384 YVGPDRSMLALATNTESIRIVSVGPSDYRPSTDGQEYFGADIAHLDGHDDIIICIDVDWS 443
Query: 632 TEMFATGGSDALVNLW 647
ATG D LW
Sbjct: 444 GHWLATGAKDNTARLW 459
Score = 53 (23.7 bits), Expect = 3.5e-13, Sum P(2) = 3.5e-13
Identities = 18/61 (29%), Positives = 25/61 (40%)
Query: 100 GHDGPAIGMACHPSGGLLATAGADRKVLVWDVD---GGF-CTHYFKGHKGVVSSILFHPD 155
GHD I + SG LAT D +W +D + C GH + +I F D
Sbjct: 430 GHDDIIICIDVDWSGHWLATGAKDNTARLWRLDPQNSSYTCFALLTGHAESLGAISFPRD 489
Query: 156 T 156
+
Sbjct: 490 S 490
Score = 48 (22.0 bits), Expect = 1.2e-12, Sum P(2) = 1.2e-12
Identities = 16/65 (24%), Positives = 27/65 (41%)
Query: 139 YFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKK----CVATLDKHFSRVTSM 194
+ GH ++ I D L +G+ D T R+W L + C A L H + ++
Sbjct: 427 HLDGHDDII--ICIDVDWSGHWLATGAKDNTARLWRLDPQNSSYTCFALLTGHAESLGAI 484
Query: 195 AITSD 199
+ D
Sbjct: 485 SFPRD 489
Score = 47 (21.6 bits), Expect = 2.2e-05, Sum P(2) = 2.2e-05
Identities = 16/55 (29%), Positives = 24/55 (43%)
Query: 291 SSDVTISFEMDDSKRGFTAATVLPSNQGLLCVTADQQLLLYTTVEVPEKKMELIL 345
S+D T++F D + +TAA N + DQQL Y + + L L
Sbjct: 747 SADSTVTFWTDTTSATYTAAV----NANSARIEQDQQLQNYIVAGAYREAITLAL 797
>ASPGD|ASPL0000032162 [details] [associations]
symbol:AN8468 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:BN001305 InterPro:IPR018391 SMART:SM00564 InterPro:IPR011044
SUPFAM:SSF50969 EMBL:AACD01000153 HOGENOM:HOG000234485
RefSeq:XP_681737.1 ProteinModelPortal:Q5ATB2
EnsemblFungi:CADANIAT00002953 GeneID:2868693 KEGG:ani:AN8468.2
OMA:VTMGEVE OrthoDB:EOG41K2M8 Uniprot:Q5ATB2
Length = 1364
Score = 472 (171.2 bits), Expect = 4.7e-41, Sum P(2) = 4.7e-41
Identities = 167/625 (26%), Positives = 287/625 (45%)
Query: 18 QFYGGGPLVVSSDGS-----FIACACGES-INIVDLSNASIKSTIEGGSDTITALALSPD 71
Q Y G L+ S +GS F G S + V+ + ++ + T+E + ++ SPD
Sbjct: 703 QLYSSG-LMFSPEGSITRRIFNYNLSGWSQLPKVEQTWSAEQQTLENHLGPVESVVFSPD 761
Query: 72 DKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDV 131
K L S + +++WD +T + L++ GH G +A P G LLA+ D + +WD
Sbjct: 762 GKQLVSGSYDDTVKIWDPATGELLQTLDGHSGTVESLAFSPDGKLLASGSYDNTIDLWDS 821
Query: 132 DGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRV 191
G F+GH + S+ F PD + L S SDD+T+++WDL + TLD H V
Sbjct: 822 ATGELLQTFEGHPHSIWSVAFAPDGKE--LASASDDSTIKIWDLATGELQQTLDSHSQSV 879
Query: 192 TSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYE-MVEAVCAIPPGSAFDSFLSS 250
S+A + DG L S+ D + +W+ + ++ V++V P G S
Sbjct: 880 RSVAFSPDGKLLASSSLDSTIKVWNPATGELQQSLEGRSGWVKSVAFSPDGK---KLASG 936
Query: 251 YNQQTIKKKRRSL-EIHFITVGERGIVRM--WNADSACLYEQKSSDVTISFEMDDSKRGF 307
+ T+K + E+ G VR ++ D L SSD TI ++ +S G
Sbjct: 937 SEKNTVKLWNPATGELLQTLEGHSQSVRSVAFSPDGKQL-ASSSSDTTI--KLWNSTTGE 993
Query: 308 TAATVLPSNQGLLCV--TADQQLLLYTTVEVPEKKMELI---LSKRLVGYNEEILDLKFL 362
T + + V + D + L+ + + K +L L + L ++ + + F
Sbjct: 994 LQQTFKGHDLWIRAVAFSPDGKHLVSGSDDNTIKLWDLATSELQQSLEDHSRSVHAVAFS 1053
Query: 363 GEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNS 422
+++Q LA ++ ++++D ++ L GHS+ V + T + GK+L + S D +
Sbjct: 1054 PDDKQ-LASSSLDSTIKLWDSATGELQRTLEGHSQGVRSV-TFS-PDGKLL-ASNSYDGT 1109
Query: 423 VRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPM 482
++LW+ + TG V +VAFS + L SG D TIK+W D + + Q +
Sbjct: 1110 IKLWNPLTGELQQTLTGRSDWVDSVAFSPDGKQ-LASGYYDSTIKLW--DSATGELLQTL 1166
Query: 483 NLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVW--RLPDLVSVVTFRGHKRGIW 540
H I S+ +P+ L+ +GS D+TA +W +L+ + F GH + +
Sbjct: 1167 E--------GHSDRIQSVVFSPDGKLLASGSYDQTAKLWDPATGELLQI--FEGHSKWVE 1216
Query: 541 SVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADG 600
SV FSP +++ ++S +TIK+W G L+T S +F G ++ S
Sbjct: 1217 SVAFSPDGKLLASSSYGETIKLWDPVTGELLQTLNDPDESAGSVAFSPDGNRLASVDIFD 1276
Query: 601 LVKLWTVRTGECIATYDKHEDKIWA 625
K+W TGE + H +W+
Sbjct: 1277 -TKIWDPATGELLQALKGHSKWVWS 1300
Score = 409 (149.0 bits), Expect = 1.6e-33, Sum P(2) = 1.6e-33
Identities = 153/597 (25%), Positives = 266/597 (44%)
Query: 2 ASLP-LKKSYGCEP-VLQQFYGGGPLVV-SSDGS-FIACACGESINIVDLSNASIKSTIE 57
+ LP +++++ E L+ G VV S DG ++ + +++ I D + + T++
Sbjct: 730 SQLPKVEQTWSAEQQTLENHLGPVESVVFSPDGKQLVSGSYDDTVKIWDPATGELLQTLD 789
Query: 58 GGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPSGGLL 117
G S T+ +LA SPD KLL S + I +WD +T + L++++GH +A P G L
Sbjct: 790 GHSGTVESLAFSPDGKLLASGSYDNTIDLWDSATGELLQTFEGHPHSIWSVAFAPDGKEL 849
Query: 118 ATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLA 177
A+A D + +WD+ G H V S+ F PD LL S S D+T++VW+
Sbjct: 850 ASASDDSTIKIWDLATGELQQTLDSHSQSVRSVAFSPDG--KLLASSSLDSTIKVWNPAT 907
Query: 178 KKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTY-EMVEAVC 236
+ +L+ V S+A + DG L S V LW+ T+ + + V +V
Sbjct: 908 GELQQSLEGRSGWVKSVAFSPDGKKLASGSEKNTVKLWNPATGELLQTLEGHSQSVRSVA 967
Query: 237 AIPPG-----SAFDSFLSSYNQQT--IKK--KRRSLEIHFITVGERG--IVRMWNADSAC 285
P G S+ D+ + +N T +++ K L I + G +V + ++
Sbjct: 968 FSPDGKQLASSSSDTTIKLWNSTTGELQQTFKGHDLWIRAVAFSPDGKHLVSGSDDNTIK 1027
Query: 286 LYEQKSSDVTISFEMDDSKRGFTAATVLPSNQGLLCVTADQQLLLYTTVEVPEKKMELIL 345
L++ +S++ S E D R A P ++ L + D + L+ + E L
Sbjct: 1028 LWDLATSELQQSLE--DHSRSVHAVAFSPDDKQLASSSLDSTIKLWDSA-TGE------L 1078
Query: 346 SKRLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTC 405
+ L G+++ + + F + + LA + +++++ + L G S+ V D+
Sbjct: 1079 QRTLEGHSQGVRSVTF-SPDGKLLASNSYDGTIKLWNPLTGELQQTLTGRSDWV---DSV 1134
Query: 406 ALS-SGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDH 464
A S GK L +G D++++LWDS + + GH + +V FS L SGS D
Sbjct: 1135 AFSPDGKQL-ASGYYDSTIKLWDSATGELLQTLEGHSDRIQSVVFSPD-GKLLASGSYDQ 1192
Query: 465 TIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLP 524
T K+W P + + H K + S+A +P+ L+ + S T +W
Sbjct: 1193 TAKLWD----------PATGELLQIFEGHSKWVESVAFSPDGKLLASSSYGETIKLWDPV 1242
Query: 525 DLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSV 581
+ T SV FSP + + T KIW + G L+ +GH+ V
Sbjct: 1243 TGELLQTLNDPDESAGSVAFSPDGNRLASVDIFDT-KIWDPATGELLQALKGHSKWV 1298
Score = 348 (127.6 bits), Expect = 1.2e-26, Sum P(2) = 1.2e-26
Identities = 129/479 (26%), Positives = 216/479 (45%)
Query: 183 TLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYE-MVEAVCAIPPG 241
TL+ H V S+ + DG L+S D V +WD T+ + VE++ P G
Sbjct: 745 TLENHLGPVESVVFSPDGKQLVSGSYDDTVKIWDPATGELLQTLDGHSGTVESLAFSPDG 804
Query: 242 SAFDSFLSSYNQQTIKKKRRSLEIHFITVGERGIVRMWN---ADSACLYEQKSSDVTISF 298
S SY+ TI S + E +W+ A S D TI
Sbjct: 805 KLLAS--GSYDN-TIDLWD-SATGELLQTFEGHPHSIWSVAFAPDGKELASASDDSTI-- 858
Query: 299 EMDDSKRGFTAATVLPSNQGLLCV--TADQQLLLYTTVEVPEKKMELI---LSKRLVGYN 353
++ D G T+ +Q + V + D +LL ++++ K L + L G +
Sbjct: 859 KIWDLATGELQQTLDSHSQSVRSVAFSPDGKLLASSSLDSTIKVWNPATGELQQSLEGRS 918
Query: 354 EEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALS-SGKI 412
+ + F + ++ LA + V++++ ++ L GHS+ V + A S GK
Sbjct: 919 GWVKSVAFSPDGKK-LASGSEKNTVKLWNPATGELLQTLEGHSQSVRSV---AFSPDGKQ 974
Query: 413 LIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFD 472
L + S D +++LW+S + GH + AVAFS ++ LVSGS D+TIK+W D
Sbjct: 975 L-ASSSSDTTIKLWNSTTGELQQTFKGHDLWIRAVAFSPDGKH-LVSGSDDNTIKLW--D 1030
Query: 473 GLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTF 532
+ + +Q + H + ++++A +P+D + + S D T +W T
Sbjct: 1031 LATSELQQSLE--------DHSRSVHAVAFSPDDKQLASSSLDSTIKLWDSATGELQRTL 1082
Query: 533 RGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQ 592
GH +G+ SV FSP +++ + S D TIK+W+ G +T G + V +F G Q
Sbjct: 1083 EGHSQGVRSVTFSPDGKLLASNSYDGTIKLWNPLTGELQQTLTGRSDWVDSVAFSPDGKQ 1142
Query: 593 IVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLWHDST 651
+ S D +KLW TGE + T + H D+I ++ ++ A+G D LW +T
Sbjct: 1143 LASGYYDSTIKLWDSATGELLQTLEGHSDRIQSVVFSPDGKLLASGSYDQTAKLWDPAT 1201
Score = 273 (101.2 bits), Expect = 8.3e-20, P = 8.3e-20
Identities = 81/308 (26%), Positives = 141/308 (45%)
Query: 345 LSKRLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDT 404
L + L G+++ + + F + +Q LA +++ +++++ ++ GH L +
Sbjct: 952 LLQTLEGHSQSVRSVAFSPDGKQ-LASSSSDTTIKLWNSTTGELQQTFKGHD---LWIRA 1007
Query: 405 CALS-SGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSD 463
A S GK L V+GS DN+++LWD + H +V AVAFS + L S S D
Sbjct: 1008 VAFSPDGKHL-VSGSDDNTIKLWDLATSELQQSLEDHSRSVHAVAFSPDDKQ-LASSSLD 1065
Query: 464 HTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRL 523
TIK+W D + + ++ + H + + S+ +P+ L+ + S D T +W
Sbjct: 1066 STIKLW--DSATGELQRTLE--------GHSQGVRSVTFSPDGKLLASNSYDGTIKLWNP 1115
Query: 524 PDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLR 583
T G + SV FSP + + + D TIK+W + G L+T EGH+ +
Sbjct: 1116 LTGELQQTLTGRSDWVDSVAFSPDGKQLASGYYDSTIKLWDSATGELLQTLEGHSDRIQS 1175
Query: 584 ASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDAL 643
F G + S D KLW TGE + ++ H + ++A ++ A+
Sbjct: 1176 VVFSPDGKLLASGSYDQTAKLWDPATGELLQIFEGHSKWVESVAFSPDGKLLASSSYGET 1235
Query: 644 VNLWHDST 651
+ LW T
Sbjct: 1236 IKLWDPVT 1243
Score = 246 (91.7 bits), Expect = 1.9e-15, Sum P(2) = 1.9e-15
Identities = 73/283 (25%), Positives = 130/283 (45%)
Query: 345 LSKRLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDT 404
L + G++ I + F + ++L ++ ++++DL++ L HS V +
Sbjct: 994 LQQTFKGHDLWIRAVAF-SPDGKHLVSGSDDNTIKLWDLATSELQQSLEDHSRSVHAV-- 1050
Query: 405 CALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDH 464
A S + + S D++++LWDS + GH V +V FS L S S D
Sbjct: 1051 -AFSPDDKQLASSSLDSTIKLWDSATGELQRTLEGHSQGVRSVTFSPD-GKLLASNSYDG 1108
Query: 465 TIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLP 524
TIK+W+ P+ + + + ++S+A +P+ + +G D T +W
Sbjct: 1109 TIKLWN----------PLTGELQQTLTGRSDWVDSVAFSPDGKQLASGYYDSTIKLWDSA 1158
Query: 525 DLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRA 584
+ T GH I SV FSP +++ + S D+T K+W + G L+ FEGH+ V
Sbjct: 1159 TGELLQTLEGHSDRIQSVVFSPDGKLLASGSYDQTAKLWDPATGELLQIFEGHSKWVESV 1218
Query: 585 SFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALA 627
+F G + S +KLW TGE + T + ++ ++A
Sbjct: 1219 AFSPDGKLLASSSYGETIKLWDPVTGELLQTLNDPDESAGSVA 1261
Score = 127 (49.8 bits), Expect = 0.00048, P = 0.00048
Identities = 30/94 (31%), Positives = 43/94 (45%)
Query: 558 KTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYD 617
K + WS +T E H V F G Q+VS D VK+W TGE + T D
Sbjct: 734 KVEQTWSAEQ----QTLENHLGPVESVVFSPDGKQLVSGSYDDTVKIWDPATGELLQTLD 789
Query: 618 KHEDKIWALAVGKKTEMFATGGSDALVNLWHDST 651
H + +LA ++ A+G D ++LW +T
Sbjct: 790 GHSGTVESLAFSPDGKLLASGSYDNTIDLWDSAT 823
Score = 38 (18.4 bits), Expect = 4.7e-41, Sum P(2) = 4.7e-41
Identities = 8/21 (38%), Positives = 12/21 (57%)
Query: 610 GECIATYDKHEDKIWALAVGK 630
G +A+ D + KIW A G+
Sbjct: 1266 GNRLASVDIFDTKIWDPATGE 1286
>DICTYBASE|DDB_G0282623 [details] [associations]
symbol:wdr3 "U3 snoRNP protein" species:44689
"Dictyostelium discoideum" [GO:0008150 "biological_process"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0282623 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:AAFI02000047 GenomeReviews:CM000152_GR
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR007148
Pfam:PF04003 KO:K14556 OMA:SIFAHDD HSSP:Q02793 RefSeq:XP_640160.1
ProteinModelPortal:Q54S79 STRING:Q54S79 EnsemblProtists:DDB0233973
GeneID:8623698 KEGG:ddi:DDB_G0282623 ProtClustDB:CLSZ2430470
Uniprot:Q54S79
Length = 942
Score = 316 (116.3 bits), Expect = 1.6e-40, Sum P(3) = 1.6e-40
Identities = 74/303 (24%), Positives = 147/303 (48%)
Query: 351 GYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSG 410
G+ +I L L +Q L V+T+ E V+V+++ S+SC +A + LC + G
Sbjct: 394 GHRSDIRSLS-LSSNDQML-VSTSSESVKVWNMKSLSCIRSIA--CDYGLCT---VFAPG 446
Query: 411 KILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWS 470
+ ++ G+K ++ +++ S V H G+V ++ + L+ + SG +D +K W
Sbjct: 447 NLHVIVGTKTGTIEVFELASAARVASIKAHEGSVWSLVLTPDLRG-VTSGGADKLVKFWD 505
Query: 471 FDGLS---DDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLV 527
F+ ++ + + +NL + D+ +L + ++ + D T ++ +
Sbjct: 506 FELIASQENSKHKVLNLSLTKTLKVES-DVLALKYSADNKFLAVSLLDNTVKIFYTDTVK 564
Query: 528 SVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFL 587
++ GHK + ++ S ++IT S DK IKIW + G C K+F H S+++ SF+
Sbjct: 565 FHLSLYGHKLPVMCLDISDDSTLIITGSADKNIKIWGLDYGDCHKSFFAHDDSIMQVSFI 624
Query: 588 TRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLW 647
+S D +K W E I T + H ++W+LA+G + F +G D + ++
Sbjct: 625 PSTHHFISASKDKRIKYWDADKFEHIQTIEAHHGEVWSLAMGSVGDFFISGSHDRSIRIF 684
Query: 648 HDS 650
+ +
Sbjct: 685 NQT 687
Score = 207 (77.9 bits), Expect = 1.6e-40, Sum P(3) = 1.6e-40
Identities = 49/193 (25%), Positives = 89/193 (46%)
Query: 26 VVSSDGSFIACACGESINIVDLSNASIKSTI--EGGSDTITALALSPDDKLLFSSGHSR- 82
++ G CGE I+I DL + ++ E +T + LS D LL +SG+S
Sbjct: 23 ILDGSGKLAITGCGERISIWDLRKQVLNQSLYEEDIKAEVTNVCLSKDGALL-ASGYSDG 81
Query: 83 EIRVWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKG 142
IR+W +S + + GH G M + G +L + D +V+VWD+ +G
Sbjct: 82 SIRIWSMSDYQLQAVFNGHRGSVTTMTFNRLGNILVSGSKDTEVIVWDIITESGLFRLRG 141
Query: 143 HKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGST 202
H+ ++S+ ++ L + S D +++WD + C+ T+ H + + + + D +
Sbjct: 142 HRDQITSVKLLERSNH--LITSSKDGFIKIWDTETQHCIQTIVGHRNPIWGIDVNPDETR 199
Query: 203 LISAGRDKVVNLW 215
L S D + W
Sbjct: 200 LCSCTSDNQIRFW 212
Score = 196 (74.1 bits), Expect = 1.1e-11, P = 1.1e-11
Identities = 34/152 (22%), Positives = 69/152 (45%)
Query: 496 DINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITAS 555
++ ++ ++ + +L+ +G D + +W + D F GH+ + ++ F+ + ++++ S
Sbjct: 61 EVTNVCLSKDGALLASGYSDGSIRIWSMSDYQLQAVFNGHRGSVTTMTFNRLGNILVSGS 120
Query: 556 GDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIAT 615
D + +W I S L GH + L R +++ DG +K+W T CI T
Sbjct: 121 KDTEVIVWDIITESGLFRLRGHRDQITSVKLLERSNHLITSSKDGFIKIWDTETQHCIQT 180
Query: 616 YDKHEDKIWALAVGKKTEMFATGGSDALVNLW 647
H + IW + V + SD + W
Sbjct: 181 IVGHRNPIWGIDVNPDETRLCSCTSDNQIRFW 212
Score = 185 (70.2 bits), Expect = 1.7e-10, P = 1.7e-10
Identities = 46/168 (27%), Positives = 79/168 (47%)
Query: 49 NASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGM 108
N S+ T++ SD + AL S D+K L S ++++ T+K S GH P + +
Sbjct: 521 NLSLTKTLKVESDVL-ALKYSADNKFLAVSLLDNTVKIFYTDTVKFHLSLYGHKLPVMCL 579
Query: 109 ACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDA 168
L+ T AD+ + +W +D G C F H + + F P T + S S D
Sbjct: 580 DISDDSTLIITGSADKNIKIWGLDYGDCHKSFFAHDDSIMQVSFIPSTHHFI--SASKDK 637
Query: 169 TVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWD 216
++ WD + + T++ H V S+A+ S G IS D+ + +++
Sbjct: 638 RIKYWDADKFEHIQTIEAHHGEVWSLAMGSVGDFFISGSHDRSIRIFN 685
Score = 176 (67.0 bits), Expect = 1.6e-09, P = 1.6e-09
Identities = 50/197 (25%), Positives = 87/197 (44%)
Query: 369 LAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDS 428
LA+ E++ ++DL + L +I + LS L+ +G D S+R+W
Sbjct: 30 LAITGCGERISIWDLRKQVLNQSLY-EEDIKAEVTNVCLSKDGALLASGYSDGSIRIWSM 88
Query: 429 ESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKA 488
V GH G+V + F++ L N LVSGS D + VW D +++ L+
Sbjct: 89 SDYQLQAVFNGHRGSVTTMTFNR-LGNILVSGSKDTEVIVW--DIITESGL--FRLRG-- 141
Query: 489 VVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVD 548
H I S+ + + + T S+D +W + T GH+ IW ++ +P +
Sbjct: 142 ----HRDQITSVKLLERSNHLITSSKDGFIKIWDTETQHCIQTIVGHRNPIWGIDVNPDE 197
Query: 549 QVVITASGDKTIKIWSI 565
+ + + D I+ W I
Sbjct: 198 TRLCSCTSDNQIRFWRI 214
Score = 169 (64.5 bits), Expect = 9.0e-09, P = 9.0e-09
Identities = 54/205 (26%), Positives = 92/205 (44%)
Query: 409 SGKILIVTGSKDNSVRLWDSESRCC-VGVGTGHMGA-VGAVAFSKKLQNFLVSGSSDHTI 466
SGK L +TG + + +WD + + + A V V SK L SG SD +I
Sbjct: 27 SGK-LAITGCGER-ISIWDLRKQVLNQSLYEEDIKAEVTNVCLSKD-GALLASGYSDGSI 83
Query: 467 KVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDL 526
++WS +SD + +AV H + ++ +++ +GS+D VW +
Sbjct: 84 RIWS---MSD-------YQLQAVFNGHRGSVTTMTFNRLGNILVSGSKDTEVIVWDIITE 133
Query: 527 VSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASF 586
+ RGH+ I SV+ +IT+S D IKIW C++T GH + +
Sbjct: 134 SGLFRLRGHRDQITSVKLLERSNHLITSSKDGFIKIWDTETQHCIQTIVGHRNPIWGIDV 193
Query: 587 LTRGAQIVSCGADGLVKLWTVRTGE 611
++ SC +D ++ W + + E
Sbjct: 194 NPDETRLCSCTSDNQIRFWRIPSNE 218
Score = 166 (63.5 bits), Expect = 2.9e-36, Sum P(3) = 2.9e-36
Identities = 41/151 (27%), Positives = 72/151 (47%)
Query: 78 SGHSREIRVWDLSTLKCLRSWKGHDGPA-IGMAC-HPSGGLLATAGADRKVLVWDVDGGF 135
+G I +WDL +S D A + C G LLA+ +D + +W +
Sbjct: 33 TGCGERISIWDLRKQVLNQSLYEEDIKAEVTNVCLSKDGALLASGYSDGSIRIWSMSDYQ 92
Query: 136 CTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMA 195
F GH+G V+++ F+ ++L SGS D V VWD++ + + L H ++TS+
Sbjct: 93 LQAVFNGHRGSVTTMTFN--RLGNILVSGSKDTEVIVWDIITESGLFRLRGHRDQITSVK 150
Query: 196 ITSDGSTLISAGRDKVVNLWDLRDYSCKLTV 226
+ + LI++ +D + +WD C T+
Sbjct: 151 LLERSNHLITSSKDGFIKIWDTETQHCIQTI 181
Score = 126 (49.4 bits), Expect = 5.8e-20, Sum P(3) = 5.8e-20
Identities = 27/123 (21%), Positives = 60/123 (48%)
Query: 525 DLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRA 584
++ S + GH+ I S+ S DQ++++ S + ++K+W++ SC+++ L
Sbjct: 385 EVSSTLDQAGHRSDIRSLSLSSNDQMLVSTSSE-SVKVWNMKSLSCIRSIACDYG--LCT 441
Query: 585 SFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALV 644
F ++ G ++++ + + +A+ HE +W+L + +GG+D LV
Sbjct: 442 VFAPGNLHVIVGTKTGTIEVFELASAARVASIKAHEGSVWSLVLTPDLRGVTSGGADKLV 501
Query: 645 NLW 647
W
Sbjct: 502 KFW 504
Score = 125 (49.1 bits), Expect = 7.4e-20, Sum P(3) = 7.4e-20
Identities = 40/141 (28%), Positives = 72/141 (51%)
Query: 491 AAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQV 550
A H DI SL+++ ND ++ + S + VW + L S + G+ +V F+P +
Sbjct: 393 AGHRSDIRSLSLSSNDQMLVSTSSESVK-VWNMKSL-SCIRSIACDYGLCTV-FAPGNLH 449
Query: 551 VITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQ-IVSCGADGLVKLWTVRT 609
VI + TI+++ ++ + + + + H SV + LT + + S GAD LVK W
Sbjct: 450 VIVGTKTGTIEVFELASAARVASIKAHEGSVW-SLVLTPDLRGVTSGGADKLVKFWDF-- 506
Query: 610 GECIATYDKHEDKIWALAVGK 630
E IA+ + + K+ L++ K
Sbjct: 507 -ELIASQENSKHKVLNLSLTK 526
Score = 125 (49.1 bits), Expect = 0.00051, P = 0.00051
Identities = 36/146 (24%), Positives = 65/146 (44%)
Query: 508 LVCTGSQDRTACVWRL-PDLVSVVTFRGH-KRGIWSVEFSPVDQVVITASGDKTIKIWSI 565
L TG +R + +W L +++ + K + +V S ++ + D +I+IWS+
Sbjct: 30 LAITGCGERIS-IWDLRKQVLNQSLYEEDIKAEVTNVCLSKDGALLASGYSDGSIRIWSM 88
Query: 566 SDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWA 625
SD F GH SV +F G +VS D V +W + T + H D+I +
Sbjct: 89 SDYQLQAVFNGHRGSVTTMTFNRLGNILVSGSKDTEVIVWDIITESGLFRLRGHRDQITS 148
Query: 626 LAVGKKTEMFATGGSDALVNLWHDST 651
+ + +++ T D + +W T
Sbjct: 149 VKLLERSNHLITSSKDGFIKIWDTET 174
Score = 121 (47.7 bits), Expect = 0.00099, Sum P(2) = 0.00099
Identities = 46/211 (21%), Positives = 91/211 (43%)
Query: 377 QVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGV 436
+V V+D+ + S + L GH + + + S+ ++T SKD +++WD+E++ C+
Sbjct: 124 EVIVWDIITESGLFRLRGHRDQITSVKLLERSNH---LITSSKDGFIKIWDTETQHCIQT 180
Query: 437 GTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKD 496
GH + + + + L S +SD+ I+ W E ++ K +V
Sbjct: 181 IVGHRNPIWGIDVNPD-ETRLCSCTSDNQIRFWRIPSNERQREDGSGIEPKFIV---NTP 236
Query: 497 INSLAVAPNDSLVCTGSQDRTACVWR---LPDL--VSVVTFRGH-------KRGIWSVEF 544
INS + P D + GS+ + + DL +S F + + V F
Sbjct: 237 INSAVIIP-DEINEDGSKKENSNNSNNNDIDDLEIISEEEFAKYYGSITVKAESVSGVRF 295
Query: 545 SPVDQVVITASGDKTIKIWSISDGSCLKTFE 575
P ++++ S K + ++ I+ +K E
Sbjct: 296 DPTNKILAVQSTGKFVDLFKITHYDTMKLEE 326
Score = 99 (39.9 bits), Expect = 2.6e-29, Sum P(3) = 2.6e-29
Identities = 25/102 (24%), Positives = 46/102 (45%)
Query: 31 GSFIACACGESINIV-DLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWDL 89
G+ + ++ IV D+ S + G D IT++ L L +S I++WD
Sbjct: 113 GNILVSGSKDTEVIVWDIITESGLFRLRGHRDQITSVKLLERSNHLITSSKDGFIKIWDT 172
Query: 90 STLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDV 131
T C+++ GH P G+ +P L + +D ++ W +
Sbjct: 173 ETQHCIQTIVGHRNPIWGIDVNPDETRLCSCTSDNQIRFWRI 214
Score = 80 (33.2 bits), Expect = 6.9e-08, Sum P(3) = 6.9e-08
Identities = 17/79 (21%), Positives = 39/79 (49%)
Query: 348 RLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCAL 407
RL G+ ++I +K L E +L ++ ++++D + C + GH + +D +
Sbjct: 138 RLRGHRDQITSVKLL-ERSNHLITSSKDGFIKIWDTETQHCIQTIVGHRNPIWGID---V 193
Query: 408 SSGKILIVTGSKDNSVRLW 426
+ + + + + DN +R W
Sbjct: 194 NPDETRLCSCTSDNQIRFW 212
Score = 50 (22.7 bits), Expect = 3.0e-24, Sum P(3) = 3.0e-24
Identities = 24/97 (24%), Positives = 42/97 (43%)
Query: 185 DKHFSRVTSMAITSDGS-TLISAGRDKVVNLWDLRDYSCKLTVPTYEM---VEAVCAIPP 240
DK F +++ DGS L G + +++WDLR ++ ++ V VC
Sbjct: 11 DKVFGLISTSNSILDGSGKLAITGCGERISIWDLRKQVLNQSLYEEDIKAEVTNVCLSKD 70
Query: 241 GSAFDSFLSSYNQQTIKKKRRS-LEIHFITVGERGIV 276
G+ S Y+ +I+ S ++ + G RG V
Sbjct: 71 GALL---ASGYSDGSIRIWSMSDYQLQAVFNGHRGSV 104
Score = 44 (20.5 bits), Expect = 1.3e-23, Sum P(3) = 1.3e-23
Identities = 9/40 (22%), Positives = 18/40 (45%)
Query: 248 LSSYNQQTIKKKRRSLEIHFITVGERGIVRMWNADSA-CL 286
L + Q K H IT + G +++W+ ++ C+
Sbjct: 139 LRGHRDQITSVKLLERSNHLITSSKDGFIKIWDTETQHCI 178
Score = 37 (18.1 bits), Expect = 1.6e-40, Sum P(3) = 1.6e-40
Identities = 10/29 (34%), Positives = 15/29 (51%)
Query: 353 NEEILDLKFLGEEE---QYLAVATNIEQV 378
N +I DL+ + EEE Y ++ E V
Sbjct: 262 NNDIDDLEIISEEEFAKYYGSITVKAESV 290
>UNIPROTKB|F1NC11 [details] [associations]
symbol:WDR3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005730 "nucleolus" evidence=IEA] [GO:0031965 "nuclear
membrane" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0031965 InterPro:IPR020472
PRINTS:PR00320 InterPro:IPR007148 Pfam:PF04003
GeneTree:ENSGT00550000074925 OMA:SIFAHDD EMBL:AADN02037856
EMBL:AADN02037857 EMBL:AADN02037858 EMBL:AADN02037859
EMBL:AADN02037860 IPI:IPI00583802 Ensembl:ENSGALT00000023879
Uniprot:F1NC11
Length = 938
Score = 301 (111.0 bits), Expect = 2.4e-39, Sum P(2) = 2.4e-39
Identities = 77/321 (23%), Positives = 144/321 (44%)
Query: 330 LYTTVEVPEKKMELILSKRLV--GYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMS 387
LYT + + + + + + R+ G+ ++ L F + L+ A E V++++ S++
Sbjct: 386 LYT-LNLSAQVPQAVRASRITIGGHRSDVRTLAFSSDNIAVLSGAA--ESVKIWNRSTLQ 442
Query: 388 CSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAV 447
C + E LC G ++ G+K ++L+D S + H GAV ++
Sbjct: 443 CIRTM--DCEYALC---SLFVPGDRQVIVGTKTGKLQLYDLASGTLMETLNAHDGAVWSI 497
Query: 448 AFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAV-VAAHGKDINSLAVAPND 506
A S + F V+G +D +K W F+ + D++ L K V + +D+ + +PN
Sbjct: 498 ALSPDQRGF-VTGGADKCVKFWDFELVKDESSIQKRLSMKQVRILQLDEDVLCVRYSPNQ 556
Query: 507 SLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSIS 566
L+ D T V+ L ++ GHK + ++ S ++ T S D+ +KIW +
Sbjct: 557 KLLAVSLLDCTVKVFYTDTLKFFLSLYGHKLPVLCMDISYDGALIATGSADRNVKIWGLD 616
Query: 567 DGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWAL 626
G C ++ H SV+ F+ + + G D +K W E I T + H ++W L
Sbjct: 617 FGDCHRSLFAHDDSVMYLQFVAKSHLFFTAGKDNKIKQWDADKFEHIQTLEGHHQEVWCL 676
Query: 627 AVGKKTEMFATGGSDALVNLW 647
A+ + + D + LW
Sbjct: 677 ALSPNGDYVVSASHDKSLRLW 697
Score = 204 (76.9 bits), Expect = 2.4e-39, Sum P(2) = 2.4e-39
Identities = 66/229 (28%), Positives = 98/229 (42%)
Query: 22 GGPLVVSSDGSFIAC----ACGESINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFS 77
G P V+ G C AC E + + D K I GS + L SPD L
Sbjct: 24 GNPAFVTLRGERGRCVAVPAC-EHVFVWDARKGE-KVLILKGSKHESCLRPSPDGLHLAV 81
Query: 78 SGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCT 137
IR++ L + + ++ GH + GG L + D V+VWDV
Sbjct: 82 GYEDGSIRIFSLLSGEASVAFNGHKAAVTALQYDQLGGRLVSGSKDTDVIVWDVINESGL 141
Query: 138 HYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAIT 197
+ KGHK V+ +LF + K+LL + D V+ WDL + C TL H + V MA+
Sbjct: 142 YRLKGHKDAVTQVLFLKE--KNLLVTSGKDTLVKWWDLDTQHCFKTLVGHRTEVWGMALV 199
Query: 198 SDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYEMVEAVCAIPPGSAFDS 246
S+ LI+ D + +WD+ Y +L P + PG+ D+
Sbjct: 200 SEEKRLITGTADSELRVWDIT-YIQELEDPDEPESKKSKGSSPGAEKDN 247
Score = 195 (73.7 bits), Expect = 1.4e-11, P = 1.4e-11
Identities = 48/157 (30%), Positives = 76/157 (48%)
Query: 61 DTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATA 120
+ + + SP+ KLL S ++V+ TLK S GH P + M G L+AT
Sbjct: 545 EDVLCVRYSPNQKLLAVSLLDCTVKVFYTDTLKFFLSLYGHKLPVLCMDISYDGALIATG 604
Query: 121 GADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKS-LLFSGSDDATVRVWDLLAKK 179
ADR V +W +D G C H S+++ KS L F+ D ++ WD +
Sbjct: 605 SADRNVKIWGLDFGDCHRSLFAHD---DSVMYLQFVAKSHLFFTAGKDNKIKQWDADKFE 661
Query: 180 CVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWD 216
+ TL+ H V +A++ +G ++SA DK + LW+
Sbjct: 662 HIQTLEGHHQEVWCLALSPNGDYVVSASHDKSLRLWE 698
Score = 189 (71.6 bits), Expect = 6.1e-11, P = 6.1e-11
Identities = 39/161 (24%), Positives = 79/161 (49%)
Query: 487 KAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSP 546
K ++ K + L +P+ + G +D + ++ L + V F GHK + ++++
Sbjct: 57 KVLILKGSKHESCLRPSPDGLHLAVGYEDGSIRIFSLLSGEASVAFNGHKAAVTALQYDQ 116
Query: 547 VDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWT 606
+ +++ S D + +W + + S L +GH +V + FL +V+ G D LVK W
Sbjct: 117 LGGRLVSGSKDTDVIVWDVINESGLYRLKGHKDAVTQVLFLKEKNLLVTSGKDTLVKWWD 176
Query: 607 VRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLW 647
+ T C T H ++W +A+ + + TG +D+ + +W
Sbjct: 177 LDTQHCFKTLVGHRTEVWGMALVSEEKRLITGTADSELRVW 217
Score = 138 (53.6 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 39/166 (23%), Positives = 73/166 (43%)
Query: 457 LVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDR 516
L G D +I+++S LS +A N AV A + V+ GS+D
Sbjct: 79 LAVGYEDGSIRIFSL--LSGEASVAFNGHKAAVTALQYDQLGGRLVS--------GSKDT 128
Query: 517 TACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEG 576
VW + + + +GHK + V F +++T+ D +K W + C KT G
Sbjct: 129 DVIVWDVINESGLYRLKGHKDAVTQVLFLKEKNLLVTSGKDTLVKWWDLDTQHCFKTLVG 188
Query: 577 HTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDK 622
H + V + ++ ++++ AD +++W + + + D+ E K
Sbjct: 189 HRTEVWGMALVSEEKRLITGTADSELRVWDITYIQELEDPDEPESK 234
Score = 135 (52.6 bits), Expect = 4.2e-05, P = 4.2e-05
Identities = 70/314 (22%), Positives = 137/314 (43%)
Query: 183 TLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYEMVEAVCAIPPGS 242
T+ H S V ++A +SD ++S G + V +W+ C + T + A+C++
Sbjct: 405 TIGGHRSDVRTLAFSSDNIAVLS-GAAESVKIWNRSTLQC---IRTMDCEYALCSL---- 456
Query: 243 AFDSFLSSYNQQTIKKKRRSLEIHFITVGERGIVRMWNADSACLY------EQKS----- 291
F+ Q + K L+++ + G ++ NA ++ +Q+
Sbjct: 457 ----FVPGDRQVIVGTKTGKLQLYDLASGT--LMETLNAHDGAVWSIALSPDQRGFVTGG 510
Query: 292 SDVTISF---EM--DDS---KR-GFTAATVLPSNQGLLCV--TADQQLLLYTTVEVPEK- 339
+D + F E+ D+S KR +L ++ +LCV + +Q+LL + ++ K
Sbjct: 511 ADKCVKFWDFELVKDESSIQKRLSMKQVRILQLDEDVLCVRYSPNQKLLAVSLLDCTVKV 570
Query: 340 ----KMELILSKRLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGH 395
++ LS L G+ +L + + + +A + V+++ L C L H
Sbjct: 571 FYTDTLKFFLS--LYGHKLPVLCMD-ISYDGALIATGSADRNVKIWGLDFGDCHRSLFAH 627
Query: 396 SEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQN 455
+ V+ L A S L T KDN ++ WD++ + GH V +A S +
Sbjct: 628 DDSVMYLQFVAKSH---LFFTAGKDNKIKQWDADKFEHIQTLEGHHQEVWCLALSPN-GD 683
Query: 456 FLVSGSSDHTIKVW 469
++VS S D ++++W
Sbjct: 684 YVVSASHDKSLRLW 697
Score = 131 (51.2 bits), Expect = 0.00011, P = 0.00011
Identities = 59/303 (19%), Positives = 134/303 (44%)
Query: 142 GHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGS 201
GH+ V ++ F +D + SG+ ++ V++W+ +C+ T+D ++ + S+ + D
Sbjct: 408 GHRSDVRTLAF--SSDNIAVLSGAAES-VKIWNRSTLQCIRTMDCEYA-LCSLFVPGDRQ 463
Query: 202 TLISAGRDKVVNLWDLRDYSCKLTVPTYE-MVEAVCAIPPGSAF-----DSFLSSYNQQT 255
++ K+ L+DL + T+ ++ V ++ P F D + ++ +
Sbjct: 464 VIVGTKTGKL-QLYDLASGTLMETLNAHDGAVWSIALSPDQRGFVTGGADKCVKFWDFEL 522
Query: 256 IK-----KKRRSL-EIHFITVGERGIVRMWNADSACLYEQKSSDVTISFEMDDSKRGFTA 309
+K +KR S+ ++ + + E + ++ + L D T+ D+ + F +
Sbjct: 523 VKDESSIQKRLSMKQVRILQLDEDVLCVRYSPNQKLL-AVSLLDCTVKVFYTDTLKFFLS 581
Query: 310 ATVLPSNQGLLC--VTADQQLLLYTTVEVPEKKMELILS---KRLVGYNEEILDLKFLGE 364
+ +LC ++ D L+ + + K L + L +++ ++ L+F+ +
Sbjct: 582 --LYGHKLPVLCMDISYDGALIATGSADRNVKIWGLDFGDCHRSLFAHDDSVMYLQFVAK 639
Query: 365 EEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVR 424
+ + +++ +D L GH + V CL ALS +V+ S D S+R
Sbjct: 640 SHLFFTAGKD-NKIKQWDADKFEHIQTLEGHHQEVWCL---ALSPNGDYVVSASHDKSLR 695
Query: 425 LWD 427
LW+
Sbjct: 696 LWE 698
Score = 128 (50.1 bits), Expect = 0.00024, P = 0.00024
Identities = 51/204 (25%), Positives = 85/204 (41%)
Query: 363 GEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNS 422
GE + +AV E V V+D +L G S+ CL S + + G +D S
Sbjct: 33 GERGRCVAVPA-CEHVFVWDARKGEKVLILKG-SKHESCLRP---SPDGLHLAVGYEDGS 87
Query: 423 VRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPM 482
+R++ S GH AV A+ + + L LVSGS D + VW D +++
Sbjct: 88 IRIFSLLSGEASVAFNGHKAAVTALQYDQ-LGGRLVSGSKDTDVIVW--DVINESGLY-- 142
Query: 483 NLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSV 542
LK H + + +L+ T +D W L T GH+ +W +
Sbjct: 143 RLKG------HKDAVTQVLFLKEKNLLVTSGKDTLVKWWDLDTQHCFKTLVGHRTEVWGM 196
Query: 543 EFSPVDQVVITASGDKTIKIWSIS 566
++ +IT + D +++W I+
Sbjct: 197 ALVSEEKRLITGTADSELRVWDIT 220
Score = 125 (49.1 bits), Expect = 0.00050, P = 0.00050
Identities = 31/128 (24%), Positives = 54/128 (42%)
Query: 63 ITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGA 122
+ + +S D L+ + R +++W L C RS HD + + L TAG
Sbjct: 589 VLCMDISYDGALIATGSADRNVKIWGLDFGDCHRSLFAHDDSVMYLQFVAKSHLFFTAGK 648
Query: 123 DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVA 182
D K+ WD D +GH V + P+ D + S S D ++R+W+ + +
Sbjct: 649 DNKIKQWDADKFEHIQTLEGHHQEVWCLALSPNGD--YVVSASHDKSLRLWERTREPLIL 706
Query: 183 TLDKHFSR 190
++ R
Sbjct: 707 EEEREMQR 714
Score = 124 (48.7 bits), Expect = 0.00064, P = 0.00064
Identities = 35/121 (28%), Positives = 59/121 (48%)
Query: 378 VQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVG 437
V V+D+ + S Y L GH + V L K L+VT KD V+ WD +++ C
Sbjct: 130 VIVWDVINESGLYRLKGHKDAVT--QVLFLKE-KNLLVTSGKDTLVKWWDLDTQHCFKTL 186
Query: 438 TGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSD--DAEQPMNLKAKAVVAAHGK 495
GH V +A + + L++G++D ++VW + + D ++P + K+K K
Sbjct: 187 VGHRTEVWGMALVSE-EKRLITGTADSELRVWDITYIQELEDPDEPESKKSKGSSPGAEK 245
Query: 496 D 496
D
Sbjct: 246 D 246
>MGI|MGI:2443143 [details] [associations]
symbol:Wdr3 "WD repeat domain 3" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:2443143 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0031965
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR007148
Pfam:PF04003 GeneTree:ENSGT00550000074925 HOGENOM:HOG000212524
KO:K14556 OMA:SIFAHDD HSSP:Q02793 CTD:10885 HOVERGEN:HBG013192
OrthoDB:EOG412M4S EMBL:AK050738 EMBL:AK050797 EMBL:BC063100
IPI:IPI00221822 RefSeq:NP_780761.1 UniGene:Mm.24591
ProteinModelPortal:Q8BHB4 SMR:Q8BHB4 STRING:Q8BHB4
PhosphoSite:Q8BHB4 PaxDb:Q8BHB4 PRIDE:Q8BHB4
Ensembl:ENSMUST00000052120 GeneID:269470 KEGG:mmu:269470
UCSC:uc008qqo.2 InParanoid:Q8BHB4 NextBio:392854 Bgee:Q8BHB4
Genevestigator:Q8BHB4 Uniprot:Q8BHB4
Length = 942
Score = 288 (106.4 bits), Expect = 2.6e-38, Sum P(2) = 2.6e-38
Identities = 71/298 (23%), Positives = 133/298 (44%)
Query: 351 GYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSG 410
G+ ++ L F + L+ A + +++++ S++ C + E LC G
Sbjct: 412 GHRSDVRTLSFSSDNIAVLSAAA--DSIKIWNRSTLQCIRTMP--CEYALC---SFFVPG 464
Query: 411 KILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWS 470
+V G+K +++L+D S + H GA+ +++ S + F V+G +D +K W
Sbjct: 465 DRQVVIGTKTGNLQLYDLASGTLLETIAAHDGALWSMSLSPDQRGF-VTGGADKAVKFWD 523
Query: 471 FDGLSDDAEQPMNLKAKAVVAAH-GKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSV 529
F+ ++D L K +D+ ++ +PN L+ D T V+ + L
Sbjct: 524 FELVTDKNSTQKRLSVKQTRTLQLDEDVLCVSYSPNQKLLAVSLLDCTVKVFYVDTLKFF 583
Query: 530 VTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTR 589
++ GHK + ++ S ++ T S D+ +KIW + G C ++ H SV+ F+ +
Sbjct: 584 LSLYGHKLPVLCMDISHDGALIATGSADRNVKIWGLDFGDCHRSLFAHDDSVMYLRFVPK 643
Query: 590 GAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLW 647
+ G D +K W E I T + H +IW LAV + + D + LW
Sbjct: 644 SHLFFTAGKDHKIKQWDADKFEHIQTLEGHHQEIWCLAVSPSGDYVVSASHDKSLRLW 701
Score = 208 (78.3 bits), Expect = 2.6e-38, Sum P(2) = 2.6e-38
Identities = 54/197 (27%), Positives = 88/197 (44%)
Query: 31 GSFIACACGESINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLS 90
G ++A E + I DL ++G +T L SPD L IR++ L
Sbjct: 36 GRYVAVPACEHVFIWDLRKGEKILILQGNKQEVTCLCPSPDGLHLAVGYEDGAIRIFSLL 95
Query: 91 TLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSI 150
+ + ++ GH + GG LA+ D V++WDV + KGHK V+
Sbjct: 96 SGEGNITFNGHKAAVTSLKYDQLGGRLASGSKDTDVIIWDVINESGLYRLKGHKDAVTQA 155
Query: 151 LFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDK 210
LF +++LL + D V+ WDL + C T+ H + V + + S+ LI+ D
Sbjct: 156 LFL--RERNLLVTSGKDTMVKWWDLDNQHCFKTMVGHRTEVWGLVLVSEEKRLITGAADS 213
Query: 211 VVNLWDLRDYSCKLTVP 227
+ WD+ DY ++ P
Sbjct: 214 ELRAWDI-DYLQEIDDP 229
Score = 206 (77.6 bits), Expect = 8.9e-13, P = 8.9e-13
Identities = 51/168 (30%), Positives = 82/168 (48%)
Query: 51 SIKST--IEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGM 108
S+K T ++ D + ++ SP+ KLL S ++V+ + TLK S GH P + M
Sbjct: 538 SVKQTRTLQLDEDVL-CVSYSPNQKLLAVSLLDCTVKVFYVDTLKFFLSLYGHKLPVLCM 596
Query: 109 ACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDA 168
G L+AT ADR V +W +D G C H V + F P + L F+ D
Sbjct: 597 DISHDGALIATGSADRNVKIWGLDFGDCHRSLFAHDDSVMYLRFVPKSH--LFFTAGKDH 654
Query: 169 TVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWD 216
++ WD + + TL+ H + +A++ G ++SA DK + LW+
Sbjct: 655 KIKQWDADKFEHIQTLEGHHQEIWCLAVSPSGDYVVSASHDKSLRLWE 702
Score = 186 (70.5 bits), Expect = 1.3e-10, P = 1.3e-10
Identities = 38/159 (23%), Positives = 76/159 (47%)
Query: 489 VVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVD 548
++ + +++ L +P+ + G +D ++ L +TF GHK + S+++ +
Sbjct: 60 ILQGNKQEVTCLCPSPDGLHLAVGYEDGAIRIFSLLSGEGNITFNGHKAAVTSLKYDQLG 119
Query: 549 QVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVR 608
+ + S D + IW + + S L +GH +V +A FL +V+ G D +VK W +
Sbjct: 120 GRLASGSKDTDVIIWDVINESGLYRLKGHKDAVTQALFLRERNLLVTSGKDTMVKWWDLD 179
Query: 609 TGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLW 647
C T H ++W L + + + TG +D+ + W
Sbjct: 180 NQHCFKTMVGHRTEVWGLVLVSEEKRLITGAADSELRAW 218
Score = 150 (57.9 bits), Expect = 2.0e-23, Sum P(2) = 2.0e-23
Identities = 39/159 (24%), Positives = 71/159 (44%)
Query: 524 PDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLR 583
P S +T GH+ + ++ FS + V++A+ D +IKIW+ S C++T L
Sbjct: 402 PVRTSRITIGGHRSDVRTLSFSSDNIAVLSAAAD-SIKIWNRSTLQCIRTMP--CEYALC 458
Query: 584 ASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDAL 643
+ F+ Q+V G ++L+ + +G + T H+ +W++++ F TGG+D
Sbjct: 459 SFFVPGDRQVVIGTKTGNLQLYDLASGTLLETIAAHDGALWSMSLSPDQRGFVTGGADKA 518
Query: 644 VNLWHDSTXXXXXXXXXXXXXXVLRGQELENAVLDADYT 682
V W R +L+ VL Y+
Sbjct: 519 VKFWDFELVTDKNSTQKRLSVKQTRTLQLDEDVLCVSYS 557
Score = 144 (55.7 bits), Expect = 4.5e-06, P = 4.5e-06
Identities = 56/218 (25%), Positives = 97/218 (44%)
Query: 349 LVGYNE-EILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCAL 407
L+G + I+ + GE+ +Y+AV E V ++DL +L G+ + V CL C
Sbjct: 18 LIGSQKGNIVFVTLRGEKGRYVAVPA-CEHVFIWDLRKGEKILILQGNKQEVTCL--CPS 74
Query: 408 SSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIK 467
G L V G +D ++R++ S GH AV ++ + + L L SGS D +
Sbjct: 75 PDGLHLAV-GYEDGAIRIFSLLSGEGNITFNGHKAAVTSLKYDQ-LGGRLASGSKDTDVI 132
Query: 468 VWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLV 527
+W D +++ + AV A L + + LV +G +D W L +
Sbjct: 133 IW--DVINESGLYRLKGHKDAVTQA-------LFLRERNLLVTSG-KDTMVKWWDLDNQH 182
Query: 528 SVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSI 565
T GH+ +W + ++ +IT + D ++ W I
Sbjct: 183 CFKTMVGHRTEVWGLVLVSEEKRLITGAADSELRAWDI 220
Score = 135 (52.6 bits), Expect = 1.4e-15, Sum P(2) = 1.4e-15
Identities = 45/143 (31%), Positives = 70/143 (48%)
Query: 351 GYNEEILDLKF--LGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALS 408
G+ + LK+ LG LA + V ++D+ + S Y L GH + V T AL
Sbjct: 105 GHKAAVTSLKYDQLGGR---LASGSKDTDVIIWDVINESGLYRLKGHKDAV----TQALF 157
Query: 409 -SGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAV-GAVAFSKKLQNFLVSGSSDHTI 466
+ L+VT KD V+ WD +++ C GH V G V S++ + L++G++D +
Sbjct: 158 LRERNLLVTSGKDTMVKWWDLDNQHCFKTMVGHRTEVWGLVLVSEEKR--LITGAADSEL 215
Query: 467 KVWSFDGLS--DDAEQPMNLKAK 487
+ W D L DD E+P K K
Sbjct: 216 RAWDIDYLQEIDDPEEPEPKKIK 238
Score = 131 (51.2 bits), Expect = 0.00011, P = 0.00011
Identities = 31/128 (24%), Positives = 54/128 (42%)
Query: 63 ITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGA 122
+ + +S D L+ + R +++W L C RS HD + + P L TAG
Sbjct: 593 VLCMDISHDGALIATGSADRNVKIWGLDFGDCHRSLFAHDDSVMYLRFVPKSHLFFTAGK 652
Query: 123 DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVA 182
D K+ WD D +GH + + P D + S S D ++R+W+ + +
Sbjct: 653 DHKIKQWDADKFEHIQTLEGHHQEIWCLAVSPSGD--YVVSASHDKSLRLWERTREPLIL 710
Query: 183 TLDKHFSR 190
++ R
Sbjct: 711 EEEREMQR 718
Score = 127 (49.8 bits), Expect = 5.0e-21, Sum P(2) = 5.0e-21
Identities = 65/305 (21%), Positives = 129/305 (42%)
Query: 183 TLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPT-YEMV--------E 233
T+ H S V +++ +SD ++SA D + +W+ C T+P Y + +
Sbjct: 409 TIGGHRSDVRTLSFSSDNIAVLSAAADSI-KIWNRSTLQCIRTMPCEYALCSFFVPGDRQ 467
Query: 234 AVCAIPPGSA--FDSFLSSYNQQTIKKKRRSLEIHFITVGERGIVRMWNADSACLYEQKS 291
V G+ +D S +TI +L ++ +RG V AD A K
Sbjct: 468 VVIGTKTGNLQLYD-LASGTLLETIAAHDGALWSMSLSPDQRGFVT-GGADKAV----KF 521
Query: 292 SDVTISFEMDDSKRGFTA--ATVLPSNQGLLCVT--ADQQLLLYTTVEVPEKKMELILSK 347
D + + + +++ + L ++ +LCV+ +Q+LL + ++ K + K
Sbjct: 522 WDFELVTDKNSTQKRLSVKQTRTLQLDEDVLCVSYSPNQKLLAVSLLDCTVKVFYVDTLK 581
Query: 348 ---RLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDT 404
L G+ +L + + + +A + V+++ L C L H + V+ L
Sbjct: 582 FFLSLYGHKLPVLCMD-ISHDGALIATGSADRNVKIWGLDFGDCHRSLFAHDDSVMYLRF 640
Query: 405 CALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDH 464
S L T KD+ ++ WD++ + GH + +A S +++VS S D
Sbjct: 641 VPKSH---LFFTAGKDHKIKQWDADKFEHIQTLEGHHQEIWCLAVSPS-GDYVVSASHDK 696
Query: 465 TIKVW 469
++++W
Sbjct: 697 SLRLW 701
Score = 117 (46.2 bits), Expect = 9.1e-29, Sum P(2) = 9.1e-29
Identities = 41/176 (23%), Positives = 72/176 (40%)
Query: 44 IVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDG 103
I D+ N S ++G D +T + LL +SG ++ WDL C ++ GH
Sbjct: 133 IWDVINESGLYRLKGHKDAVTQALFLRERNLLVTSGKDTMVKWWDLDNQHCFKTMVGHRT 192
Query: 104 PAIGMACHPSGGLLATAGADRKVLVWDVD--GGFCTHYFKGHKGVVS--SILFHPDTDKS 159
G+ L T AD ++ WD+D K + I P+++ S
Sbjct: 193 EVWGLVLVSEEKRLITGAADSELRAWDIDYLQEIDDPEEPEPKKIKECPGIQDTPESEDS 252
Query: 160 LLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLW 215
L + + + R+ L K + + + RV ++A+ G L G D V+ ++
Sbjct: 253 TLEADDEKSEDRI--LSCSKAGSIMREGRDRVVNLAVDKTGRILACHGTDSVLEVF 306
Score = 104 (41.7 bits), Expect = 2.3e-12, Sum P(2) = 2.3e-12
Identities = 38/162 (23%), Positives = 64/162 (39%)
Query: 368 YLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWD 427
+LAV ++++ L S + GH V L L G++ +GSKD V +WD
Sbjct: 79 HLAVGYEDGAIRIFSLLSGEGNITFNGHKAAVTSLKYDQLG-GRL--ASGSKDTDVIIWD 135
Query: 428 SESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAK 487
+ + GH AV F ++ +N LV+ D +K W D N
Sbjct: 136 VINESGLYRLKGHKDAVTQALFLRE-RNLLVTSGKDTMVKWWDLD----------NQHCF 184
Query: 488 AVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSV 529
+ H ++ L + + + TG+ D W + L +
Sbjct: 185 KTMVGHRTEVWGLVLVSEEKRLITGAADSELRAWDIDYLQEI 226
Score = 81 (33.6 bits), Expect = 3.1e-16, Sum P(2) = 3.1e-16
Identities = 18/81 (22%), Positives = 40/81 (49%)
Query: 347 KRLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCA 406
+ L +++ ++ L+F+ + + + +++ +D L GH + + CL A
Sbjct: 626 RSLFAHDDSVMYLRFVPKSHLFFTAGKD-HKIKQWDADKFEHIQTLEGHHQEIWCL---A 681
Query: 407 LSSGKILIVTGSKDNSVRLWD 427
+S +V+ S D S+RLW+
Sbjct: 682 VSPSGDYVVSASHDKSLRLWE 702
Score = 51 (23.0 bits), Expect = 4.0e-13, Sum P(2) = 4.0e-13
Identities = 57/272 (20%), Positives = 104/272 (38%)
Query: 198 SDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYEMVEAVCAIPPGSAFDSFLSSYNQQTIK 257
S +++ GRD+VVNL + T ++E C + + + +K
Sbjct: 269 SKAGSIMREGRDRVVNLAVDKTGRILACHGTDSVLEVFCILSKAE-----VQKKMDKKLK 323
Query: 258 KKRRSLEIHFITVGE--RGIVRMWNADSACLYEQ-KSSDVTISFEMDDSKRGFTAATVLP 314
K R+ ++ E V M D + K+S SF++ S +G A L
Sbjct: 324 KARKKARLNSANEEEDPETSVSMTLQDEILRVAKIKTSAKIKSFDLIHSPQGELKAVFLL 383
Query: 315 SNQGLLCVTADQQLLLYTTVEVPEKKMELILSKRLVGYNEEILDLKFLGEEEQYLAVATN 374
N + + + L P + + + G+ ++ L F + L+ A
Sbjct: 384 QNNLVELYSLNASL----PAPQPVRTSRITIG----GHRSDVRTLSFSSDNIAVLSAAA- 434
Query: 375 IEQVQVYDLSSMSC-----------SYVLAGHSEIVLCLDT-----CALSSGKILIVTGS 418
+ +++++ S++ C S+ + G ++V+ T L+SG +L +
Sbjct: 435 -DSIKIWNRSTLQCIRTMPCEYALCSFFVPGDRQVVIGTKTGNLQLYDLASGTLLETIAA 493
Query: 419 KDNSVRLWD-SESRCCVGVGTGHMGAVGAVAF 449
D + LW S S G TG GA AV F
Sbjct: 494 HDGA--LWSMSLSPDQRGFVTG--GADKAVKF 521
Score = 46 (21.3 bits), Expect = 2.2e-06, Sum P(2) = 2.2e-06
Identities = 10/37 (27%), Positives = 22/37 (59%)
Query: 347 KRLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDL 383
K +VG+ E+ L + EE++ + A + E ++ +D+
Sbjct: 185 KTMVGHRTEVWGLVLVSEEKRLITGAADSE-LRAWDI 220
>RGD|1307480 [details] [associations]
symbol:Wdr3 "WD repeat domain 3" species:10116 "Rattus
norvegicus" [GO:0005634 "nucleus" evidence=ISO] [GO:0005730
"nucleolus" evidence=IEA;ISO] [GO:0031965 "nuclear membrane"
evidence=IEA;ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1307480 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0031965
InterPro:IPR020472 PRINTS:PR00320 EMBL:CH474015 InterPro:IPR007148
Pfam:PF04003 GeneTree:ENSGT00550000074925 KO:K14556 OMA:SIFAHDD
CTD:10885 OrthoDB:EOG412M4S IPI:IPI00201140 RefSeq:NP_001101175.1
UniGene:Rn.12973 Ensembl:ENSRNOT00000026726 GeneID:310720
KEGG:rno:310720 NextBio:662507 Uniprot:D4A106
Length = 942
Score = 284 (105.0 bits), Expect = 5.1e-37, Sum P(2) = 5.1e-37
Identities = 71/298 (23%), Positives = 133/298 (44%)
Query: 351 GYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSG 410
G+ ++ L F + L+ A E V++++ S++ C + E LC G
Sbjct: 412 GHRSDVRTLSFSSDNIAVLSAAA--ESVKIWNRSTLQCIRTMP--CEYALC---SFFVPG 464
Query: 411 KILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWS 470
+V G+K +++L+D S + H GA+ +++ S + F V+G +D +K W
Sbjct: 465 DRQVVIGTKTGNMQLYDLASGNLLETIAAHDGALWSMSLSPDQRGF-VTGGADKAVKFWD 523
Query: 471 FDGLSDDAEQPMNLKAKAV-VAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSV 529
F+ ++D L K + +D+ + +P+ L+ D T ++ + L
Sbjct: 524 FELVTDKNSTQKRLSVKQTRILQLDEDVLYVCYSPDQRLLAVSLLDCTVKIFYVDTLKFF 583
Query: 530 VTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTR 589
++ GHK + ++ S ++ T S D+ +KIW + G C ++ H SV+ F+ +
Sbjct: 584 LSLYGHKLPVICMDISHDGALIATGSADRNVKIWGLDFGDCHRSLFAHDDSVMHLRFVPK 643
Query: 590 GAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLW 647
+ G D +K W E I T + H +IW LAV + + D + LW
Sbjct: 644 SHLFFTAGKDHKIKQWDADKFEHIQTLEGHHQEIWCLAVSPSGDYVVSASHDKSLRLW 701
Score = 209 (78.6 bits), Expect = 4.2e-13, P = 4.2e-13
Identities = 51/167 (30%), Positives = 80/167 (47%)
Query: 51 SIKST-IEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMA 109
S+K T I + + + SPD +LL S ++++ + TLK S GH P I M
Sbjct: 538 SVKQTRILQLDEDVLYVCYSPDQRLLAVSLLDCTVKIFYVDTLKFFLSLYGHKLPVICMD 597
Query: 110 CHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDAT 169
G L+AT ADR V +W +D G C H V + F P + L F+ D
Sbjct: 598 ISHDGALIATGSADRNVKIWGLDFGDCHRSLFAHDDSVMHLRFVPKSH--LFFTAGKDHK 655
Query: 170 VRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWD 216
++ WD + + TL+ H + +A++ G ++SA DK + LW+
Sbjct: 656 IKQWDADKFEHIQTLEGHHQEIWCLAVSPSGDYVVSASHDKSLRLWE 702
Score = 200 (75.5 bits), Expect = 5.1e-37, Sum P(2) = 5.1e-37
Identities = 52/187 (27%), Positives = 84/187 (44%)
Query: 31 GSFIACACGESINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLS 90
G ++A E + I DL ++G +T L SPD L IRV+ L
Sbjct: 36 GRYVAVPACEHVFIWDLRKGEKILILQGLKQEVTCLCPSPDGLHLAVGYEDGAIRVFSLL 95
Query: 91 TLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSI 150
+ + ++ GH + GG LA+ D V++WDV + KGHK V+
Sbjct: 96 SGEGNITFNGHRAAVTSLKYDQLGGRLASGSKDTDVIIWDVINESGLYRLKGHKDAVTQA 155
Query: 151 LFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDK 210
LF +++LL + D V+ WDL + C T+ H + V + + S+ + LI+ D
Sbjct: 156 LFL--RERNLLVTSGKDTMVKWWDLDNQHCFKTMVGHRTEVWGLVLVSEETRLITGAADS 213
Query: 211 VVNLWDL 217
+ WD+
Sbjct: 214 ELRAWDI 220
Score = 182 (69.1 bits), Expect = 3.5e-10, P = 3.5e-10
Identities = 40/165 (24%), Positives = 77/165 (46%)
Query: 485 KAKAVVAAHG--KDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSV 542
K + ++ G +++ L +P+ + G +D V+ L +TF GH+ + S+
Sbjct: 54 KGEKILILQGLKQEVTCLCPSPDGLHLAVGYEDGAIRVFSLLSGEGNITFNGHRAAVTSL 113
Query: 543 EFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLV 602
++ + + + S D + IW + + S L +GH +V +A FL +V+ G D +V
Sbjct: 114 KYDQLGGRLASGSKDTDVIIWDVINESGLYRLKGHKDAVTQALFLRERNLLVTSGKDTMV 173
Query: 603 KLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLW 647
K W + C T H ++W L + + TG +D+ + W
Sbjct: 174 KWWDLDNQHCFKTMVGHRTEVWGLVLVSEETRLITGAADSELRAW 218
Score = 147 (56.8 bits), Expect = 3.0e-22, Sum P(2) = 3.0e-22
Identities = 31/124 (25%), Positives = 62/124 (50%)
Query: 524 PDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLR 583
P S +T GH+ + ++ FS D + + ++ +++KIW+ S C++T L
Sbjct: 402 PVRTSRITIGGHRSDVRTLSFSS-DNIAVLSAAAESVKIWNRSTLQCIRTMP--CEYALC 458
Query: 584 ASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDAL 643
+ F+ Q+V G ++L+ + +G + T H+ +W++++ F TGG+D
Sbjct: 459 SFFVPGDRQVVIGTKTGNMQLYDLASGNLLETIAAHDGALWSMSLSPDQRGFVTGGADKA 518
Query: 644 VNLW 647
V W
Sbjct: 519 VKFW 522
Score = 138 (53.6 bits), Expect = 1.6e-30, Sum P(2) = 1.6e-30
Identities = 38/141 (26%), Positives = 64/141 (45%)
Query: 86 VWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKG 145
+WDL + + +G + P G LA D + V+ + G F GH+
Sbjct: 49 IWDLRKGEKILILQGLKQEVTCLCPSPDGLHLAVGYEDGAIRVFSLLSGEGNITFNGHRA 108
Query: 146 VVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLIS 205
V+S+ + D L SGS D V +WD++ + + L H VT + + L++
Sbjct: 109 AVTSLKY--DQLGGRLASGSKDTDVIIWDVINESGLYRLKGHKDAVTQALFLRERNLLVT 166
Query: 206 AGRDKVVNLWDLRDYSCKLTV 226
+G+D +V WDL + C T+
Sbjct: 167 SGKDTMVKWWDLDNQHCFKTM 187
Score = 138 (53.6 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 56/219 (25%), Positives = 96/219 (43%)
Query: 349 LVGYNE-EILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCAL 407
L+G + I+ + GE+ +Y+AV E V ++DL +L G + V CL C
Sbjct: 18 LIGSQKGNIVFVTLRGEKGRYVAVPA-CEHVFIWDLRKGEKILILQGLKQEVTCL--CPS 74
Query: 408 SSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIK 467
G L V G +D ++R++ S GH AV ++ + + L L SGS D +
Sbjct: 75 PDGLHLAV-GYEDGAIRVFSLLSGEGNITFNGHRAAVTSLKYDQ-LGGRLASGSKDTDVI 132
Query: 468 VWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLV 527
+W D +++ + AV A L + + LV +G +D W L +
Sbjct: 133 IW--DVINESGLYRLKGHKDAVTQA-------LFLRERNLLVTSG-KDTMVKWWDLDNQH 182
Query: 528 SVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSIS 566
T GH+ +W + + +IT + D ++ W I+
Sbjct: 183 CFKTMVGHRTEVWGLVLVSEETRLITGAADSELRAWDIA 221
Score = 132 (51.5 bits), Expect = 8.9e-05, P = 8.9e-05
Identities = 31/128 (24%), Positives = 54/128 (42%)
Query: 63 ITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGA 122
+ + +S D L+ + R +++W L C RS HD + + P L TAG
Sbjct: 593 VICMDISHDGALIATGSADRNVKIWGLDFGDCHRSLFAHDDSVMHLRFVPKSHLFFTAGK 652
Query: 123 DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVA 182
D K+ WD D +GH + + P D + S S D ++R+W+ + +
Sbjct: 653 DHKIKQWDADKFEHIQTLEGHHQEIWCLAVSPSGD--YVVSASHDKSLRLWERTREPLIL 710
Query: 183 TLDKHFSR 190
++ R
Sbjct: 711 EEERELQR 718
Score = 128 (50.1 bits), Expect = 2.9e-20, Sum P(2) = 2.9e-20
Identities = 66/306 (21%), Positives = 132/306 (43%)
Query: 183 TLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPT-YEMV--------E 233
T+ H S V +++ +SD ++SA + V +W+ C T+P Y + +
Sbjct: 409 TIGGHRSDVRTLSFSSDNIAVLSAAAESV-KIWNRSTLQCIRTMPCEYALCSFFVPGDRQ 467
Query: 234 AVCAIPPGSAFDSFLSSYNQ-QTIKKKRRSLEIHFITVGERGIVRMWNADSACLYEQKSS 292
V G+ L+S N +TI +L ++ +RG V AD A K
Sbjct: 468 VVIGTKTGNMQLYDLASGNLLETIAAHDGALWSMSLSPDQRGFVT-GGADKAV----KFW 522
Query: 293 DVTISFEMDDSKRGFTA--ATVLPSNQGLL--CVTADQQLLLYTTVEVPEK-----KMEL 343
D + + + +++ + +L ++ +L C + DQ+LL + ++ K ++
Sbjct: 523 DFELVTDKNSTQKRLSVKQTRILQLDEDVLYVCYSPDQRLLAVSLLDCTVKIFYVDTLKF 582
Query: 344 ILSKRLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLD 403
LS L G+ ++ + + + +A + V+++ L C L H + V+ L
Sbjct: 583 FLS--LYGHKLPVICMD-ISHDGALIATGSADRNVKIWGLDFGDCHRSLFAHDDSVMHLR 639
Query: 404 TCALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSD 463
S L T KD+ ++ WD++ + GH + +A S +++VS S D
Sbjct: 640 FVPKSH---LFFTAGKDHKIKQWDADKFEHIQTLEGHHQEIWCLAVSPS-GDYVVSASHD 695
Query: 464 HTIKVW 469
++++W
Sbjct: 696 KSLRLW 701
Score = 128 (50.1 bits), Expect = 1.6e-14, Sum P(2) = 1.6e-14
Identities = 44/143 (30%), Positives = 69/143 (48%)
Query: 351 GYNEEILDLKF--LGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALS 408
G+ + LK+ LG LA + V ++D+ + S Y L GH + V T AL
Sbjct: 105 GHRAAVTSLKYDQLGGR---LASGSKDTDVIIWDVINESGLYRLKGHKDAV----TQALF 157
Query: 409 -SGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAV-GAVAFSKKLQNFLVSGSSDHTI 466
+ L+VT KD V+ WD +++ C GH V G V S++ + L++G++D +
Sbjct: 158 LRERNLLVTSGKDTMVKWWDLDNQHCFKTMVGHRTEVWGLVLVSEETR--LITGAADSEL 215
Query: 467 KVWSFDGLS--DDAEQPMNLKAK 487
+ W L DD E+P K K
Sbjct: 216 RAWDIAYLQEIDDPEEPEPKKIK 238
Score = 124 (48.7 bits), Expect = 0.00065, P = 0.00065
Identities = 33/151 (21%), Positives = 63/151 (41%)
Query: 457 LVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDR 516
L G D I+V+S LS + N H + SL + +GS+D
Sbjct: 80 LAVGYEDGAIRVFSL--LSGEGNITFN--------GHRAAVTSLKYDQLGGRLASGSKDT 129
Query: 517 TACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEG 576
+W + + + +GHK + F +++T+ D +K W + + C KT G
Sbjct: 130 DVIIWDVINESGLYRLKGHKDAVTQALFLRERNLLVTSGKDTMVKWWDLDNQHCFKTMVG 189
Query: 577 HTSSVLRASFLTRGAQIVSCGADGLVKLWTV 607
H + V ++ ++++ AD ++ W +
Sbjct: 190 HRTEVWGLVLVSEETRLITGAADSELRAWDI 220
Score = 105 (42.0 bits), Expect = 3.8e-12, Sum P(2) = 3.8e-12
Identities = 39/162 (24%), Positives = 65/162 (40%)
Query: 368 YLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWD 427
+LAV ++V+ L S + GH V L L G++ +GSKD V +WD
Sbjct: 79 HLAVGYEDGAIRVFSLLSGEGNITFNGHRAAVTSLKYDQLG-GRL--ASGSKDTDVIIWD 135
Query: 428 SESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAK 487
+ + GH AV F ++ +N LV+ D +K W D N
Sbjct: 136 VINESGLYRLKGHKDAVTQALFLRE-RNLLVTSGKDTMVKWWDLD----------NQHCF 184
Query: 488 AVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSV 529
+ H ++ L + ++ + TG+ D W + L +
Sbjct: 185 KTMVGHRTEVWGLVLVSEETRLITGAADSELRAWDIAYLQEI 226
Score = 83 (34.3 bits), Expect = 1.4e-15, Sum P(2) = 1.4e-15
Identities = 18/81 (22%), Positives = 40/81 (49%)
Query: 347 KRLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCA 406
+ L +++ ++ L+F+ + + + +++ +D L GH + + CL A
Sbjct: 626 RSLFAHDDSVMHLRFVPKSHLFFTAGKD-HKIKQWDADKFEHIQTLEGHHQEIWCL---A 681
Query: 407 LSSGKILIVTGSKDNSVRLWD 427
+S +V+ S D S+RLW+
Sbjct: 682 VSPSGDYVVSASHDKSLRLWE 702
Score = 59 (25.8 bits), Expect = 2.9e-22, Sum P(2) = 2.9e-22
Identities = 13/48 (27%), Positives = 22/48 (45%)
Query: 46 DLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLK 93
DL N T+ G + L L ++ L + E+R WD++ L+
Sbjct: 177 DLDNQHCFKTMVGHRTEVWGLVLVSEETRLITGAADSELRAWDIAYLQ 224
Score = 57 (25.1 bits), Expect = 7.0e-13, Sum P(2) = 7.0e-13
Identities = 62/270 (22%), Positives = 108/270 (40%)
Query: 202 TLISAGRDKVVNLWDLRDYSCKLTVPTYEMVEAVCAIPPGSAFDSFLSSYNQQTIKKKRR 261
+L+ GRD+VVNL + T ++E C + + + +KK R+
Sbjct: 273 SLMREGRDRVVNLAVDKTGRILACHGTDSVLEVFCILSKAE-----VQKKMDKKLKKARK 327
Query: 262 SLEIHFITVGE--RGIVRMWNADSACLYEQ-KSSDVTISFEMDDSKRGFTAATVLPSNQG 318
++ E V M D + K+S SF++ S +G A L N
Sbjct: 328 KARLNSANEEEDPETSVSMTLQDEILRVTKIKTSAKIKSFDLIHSPQGELKAVFLLQNN- 386
Query: 319 LLCVTADQQLLLYTTVEVPEKKMELILSKRLV--GYNEEILDLKFLGEEEQYLAVATNIE 376
L+ + L T++ P+ + + R+ G+ ++ L F + L+ A E
Sbjct: 387 LV-----ELYSLSTSLPNPQP----VRTSRITIGGHRSDVRTLSFSSDNIAVLSAAA--E 435
Query: 377 QVQVYDLSSMSC-----------SYVLAGHSEIVLCLDT-----CALSSGKILIVTGSKD 420
V++++ S++ C S+ + G ++V+ T L+SG +L + D
Sbjct: 436 SVKIWNRSTLQCIRTMPCEYALCSFFVPGDRQVVIGTKTGNMQLYDLASGNLLETIAAHD 495
Query: 421 NSVRLWD-SESRCCVGVGTGHMGAVGAVAF 449
+ LW S S G TG GA AV F
Sbjct: 496 GA--LWSMSLSPDQRGFVTG--GADKAVKF 521
Score = 45 (20.9 bits), Expect = 1.7e-15, Sum P(3) = 1.7e-15
Identities = 10/38 (26%), Positives = 22/38 (57%)
Query: 347 KRLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLS 384
K +VG+ E+ L + EE + + A + E ++ +D++
Sbjct: 185 KTMVGHRTEVWGLVLVSEETRLITGAADSE-LRAWDIA 221
>SGD|S000004119 [details] [associations]
symbol:DIP2 "Nucleolar protein" species:4932 "Saccharomyces
cerevisiae" [GO:0030515 "snoRNA binding" evidence=IPI] [GO:0034388
"Pwp2p-containing subcomplex of 90S preribosome" evidence=IDA]
[GO:0030686 "90S preribosome" evidence=IDA] [GO:0042254 "ribosome
biogenesis" evidence=IEA] [GO:0030529 "ribonucleoprotein complex"
evidence=IEA] [GO:0000472 "endonucleolytic cleavage to generate
mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IMP] [GO:0000447 "endonucleolytic cleavage in ITS1 to
separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
[GO:0000480 "endonucleolytic cleavage in 5'-ETS of tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
[GO:0032040 "small-subunit processome" evidence=IDA] [GO:0006364
"rRNA processing" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA;IDA] [GO:0000462 "maturation
of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SGD:S000004119 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030515 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:BK006945 EMBL:X91258
EMBL:U53881 EMBL:X89514 EMBL:U53877 GO:GO:0032040 GO:GO:0000447
GO:GO:0000472 GO:GO:0000480 InterPro:IPR007148 Pfam:PF04003
GO:GO:0034388 EMBL:Z73301 EMBL:Z73302 PIR:S59317 RefSeq:NP_013230.1
ProteinModelPortal:Q12220 SMR:Q12220 DIP:DIP-6494N IntAct:Q12220
MINT:MINT-620162 STRING:Q12220 PaxDb:Q12220 PeptideAtlas:Q12220
EnsemblFungi:YLR129W GeneID:850820 KEGG:sce:YLR129W CYGD:YLR129w
GeneTree:ENSGT00550000074925 HOGENOM:HOG000212524 KO:K14556
OMA:SIFAHDD OrthoDB:EOG4N07P3 NextBio:967067 Genevestigator:Q12220
GermOnline:YLR129W Uniprot:Q12220
Length = 943
Score = 305 (112.4 bits), Expect = 5.4e-36, Sum P(2) = 5.4e-36
Identities = 79/310 (25%), Positives = 144/310 (46%)
Query: 349 LVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALS 408
L G ++ + + ++ + LA A+N ++++++ + C E L TC
Sbjct: 387 LQGQRTDVRSID-ISDDNKLLATASN-GSLKIWNIKTHKCIRTF----ECGYAL-TCKFL 439
Query: 409 SGKILIVTGSKDNSVRLWDSESRCCVG-VGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIK 467
G +L++ G+++ ++L+D S + + H A+ ++ + + LV+GS+D T+K
Sbjct: 440 PGGLLVILGTRNGELQLFDLASSSLLDTIEDAHDAAIWSLDLTSDGKR-LVTGSADKTVK 498
Query: 468 VWSFDGLSDDAEQPMNLKAKAVVAAHGK-------DINSLAVAPNDSLVCTGSQDRTACV 520
W F + N K V+ H DI + V+P+D + D T V
Sbjct: 499 FWDFKVENSLVPGTKN-KFLPVLKLHHDTTLELTDDILCVRVSPDDRYLAISLLDNTVKV 557
Query: 521 WRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSS 580
+ L + ++ GHK + S++ S +++IT+S DK IKIW + G C K+ H S
Sbjct: 558 FFLDSMKFYLSLYGHKLPVLSIDISFDSKMIITSSADKNIKIWGLDFGDCHKSLFAHQDS 617
Query: 581 VLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGS 640
++ FL + SC D +VK W ECI H+ ++WALAV +
Sbjct: 618 IMNVKFLPQSHNFFSCSKDAVVKYWDGEKFECIQKLYAHQSEVWALAVATDGGFVVSSSH 677
Query: 641 DALVNLWHDS 650
D + +W ++
Sbjct: 678 DHSIRIWEET 687
Score = 209 (78.6 bits), Expect = 4.2e-13, P = 4.2e-13
Identities = 44/157 (28%), Positives = 80/157 (50%)
Query: 60 SDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLAT 119
+D I + +SPDD+ L S ++V+ L ++K S GH P + + ++ T
Sbjct: 531 TDDILCVRVSPDDRYLAISLLDNTVKVFFLDSMKFYLSLYGHKLPVLSIDISFDSKMIIT 590
Query: 120 AGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKK 179
+ AD+ + +W +D G C H+ + ++ F P + FS S DA V+ WD +
Sbjct: 591 SSADKNIKIWGLDFGDCHKSLFAHQDSIMNVKFLPQSHN--FFSCSKDAVVKYWDGEKFE 648
Query: 180 CVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWD 216
C+ L H S V ++A+ +DG ++S+ D + +W+
Sbjct: 649 CIQKLYAHQSEVWALAVATDGGFVVSSSHDHSIRIWE 685
Score = 195 (73.7 bits), Expect = 1.4e-11, P = 1.4e-11
Identities = 43/141 (30%), Positives = 68/141 (48%)
Query: 508 LVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISD 567
L+ G D VW L ++ F GHK I ++F +I+ S D I +W +
Sbjct: 93 LLAVGYADGVIKVWDLMSKTVLLNFNGHKAAITLLQFDGTGTRLISGSKDSNIIVWDLVG 152
Query: 568 GSCLKTFEGHTSSVLRASFLTRGAQ-IVSCGADGLVKLWTVRTGECIATYDKHEDKIWAL 626
L H S+ F +G ++S DG++KLW ++T +CI T+ H + W L
Sbjct: 153 EVGLYKLRSHKDSI--TGFWCQGEDWLISTSKDGMIKLWDLKTHQCIETHIAHTGECWGL 210
Query: 627 AVGKKTEMFATGGSDALVNLW 647
AV K ++ T G+D+ V +W
Sbjct: 211 AV--KDDLLITTGTDSQVKIW 229
Score = 168 (64.2 bits), Expect = 5.4e-36, Sum P(2) = 5.4e-36
Identities = 53/202 (26%), Positives = 81/202 (40%)
Query: 28 SSDGSFIACACGESINIVDLSNASIKSTIE-----GGSDT-------ITALALSPDDKLL 75
S G I A E +NI D+ + S + G SD T L D LL
Sbjct: 36 SGPGQLITSAL-EDVNIWDIKTGDLVSKLSDGLPPGASDARGAKPAECTYLEAHKDTDLL 94
Query: 76 FSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGF 135
I+VWDL + L ++ GH + +G L + D ++VWD+ G
Sbjct: 95 AVGYADGVIKVWDLMSKTVLLNFNGHKAAITLLQFDGTGTRLISGSKDSNIIVWDLVGEV 154
Query: 136 CTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMA 195
+ + HK ++ + L S S D +++WDL +C+ T H +A
Sbjct: 155 GLYKLRSHKDSITGFWCQGE---DWLISTSKDGMIKLWDLKTHQCIETHIAHTGECWGLA 211
Query: 196 ITSDGSTLISAGRDKVVNLWDL 217
+ D LI+ G D V +W L
Sbjct: 212 VKDD--LLITTGTDSQVKIWKL 231
Score = 154 (59.3 bits), Expect = 1.6e-34, Sum P(2) = 1.6e-34
Identities = 36/115 (31%), Positives = 55/115 (47%)
Query: 108 MACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDD 167
+ H LLA AD + VWD+ F GHK ++ + F D + L SGS D
Sbjct: 85 LEAHKDTDLLAVGYADGVIKVWDLMSKTVLLNFNGHKAAITLLQF--DGTGTRLISGSKD 142
Query: 168 ATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSC 222
+ + VWDL+ + + L H +T + LIS +D ++ LWDL+ + C
Sbjct: 143 SNIIVWDLVGEVGLYKLRSHKDSITGFWCQGE-DWLISTSKDGMIKLWDLKTHQC 196
Score = 143 (55.4 bits), Expect = 2.4e-18, Sum P(2) = 2.4e-18
Identities = 63/260 (24%), Positives = 110/260 (42%)
Query: 371 VATNIEQVQVYDLSSMSCSYVLA-GHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSE 429
+ T ++Q++DL+S S + H + LD S GK L VTGS D +V+ WD +
Sbjct: 447 LGTRNGELQLFDLASSSLLDTIEDAHDAAIWSLDLT--SDGKRL-VTGSADKTVKFWDFK 503
Query: 430 SRCCVGVGTGHMGA-VGAVAFSKKLQ---NFL-VSGSSDHTIKVWSFDGLSDDAEQPMNL 484
+ GT + V + L+ + L V S D S L D+ + L
Sbjct: 504 VENSLVPGTKNKFLPVLKLHHDTTLELTDDILCVRVSPDDRYLAIS---LLDNTVKVFFL 560
Query: 485 KA-KAVVAAHGKDINSLAVAPN-DS-LVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWS 541
+ K ++ +G + L++ + DS ++ T S D+ +W L + H+ I +
Sbjct: 561 DSMKFYLSLYGHKLPVLSIDISFDSKMIITSSADKNIKIWGLDFGDCHKSLFAHQDSIMN 620
Query: 542 VEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGL 601
V+F P + S D +K W C++ H S V + T G +VS D
Sbjct: 621 VKFLPQSHNFFSCSKDAVVKYWDGEKFECIQKLYAHQSEVWALAVATDGGFVVSSSHDHS 680
Query: 602 VKLWTVRTGECIATYDKHED 621
+++W + +K ++
Sbjct: 681 IRIWEETEDQVFLEEEKEKE 700
Score = 137 (53.3 bits), Expect = 9.9e-18, Sum P(2) = 9.9e-18
Identities = 31/119 (26%), Positives = 60/119 (50%)
Query: 530 VTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTR 589
+ +G + + S++ S ++++ TAS ++KIW+I C++TFE L FL
Sbjct: 385 IELQGQRTDVRSIDISDDNKLLATASNG-SLKIWNIKTHKCIRTFE--CGYALTCKFLPG 441
Query: 590 GAQIVSCGADGLVKLWTVRTGECIATY-DKHEDKIWALAVGKKTEMFATGGSDALVNLW 647
G ++ +G ++L+ + + + T D H+ IW+L + + TG +D V W
Sbjct: 442 GLLVILGTRNGELQLFDLASSSLLDTIEDAHDAAIWSLDLTSDGKRLVTGSADKTVKFW 500
Score = 134 (52.2 bits), Expect = 5.4e-05, P = 5.4e-05
Identities = 59/234 (25%), Positives = 97/234 (41%)
Query: 8 KSYGCEPVLQ-QFYGGGPLVVSSDGSFIACACGESINIVDLSNASIKSTIEGGSDT-ITA 65
+++ C L +F GG LV+ + GE + + DL+++S+ TIE D I +
Sbjct: 426 RTFECGYALTCKFLPGGLLVI------LGTRNGE-LQLFDLASSSLLDTIEDAHDAAIWS 478
Query: 66 LALSPDDKLLFSSGHSREIRVWDL---STL------KCLRSWKGHDGPAIGMA----C-- 110
L L+ D K L + + ++ WD ++L K L K H + + C
Sbjct: 479 LDLTSDGKRLVTGSADKTVKFWDFKVENSLVPGTKNKFLPVLKLHHDTTLELTDDILCVR 538
Query: 111 -HPSGGLLATAGADRKVLVWDVDG-GFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDA 168
P LA + D V V+ +D F + GHK V SI D ++ + S D
Sbjct: 539 VSPDDRYLAISLLDNTVKVFFLDSMKFYLSLY-GHKLPVLSIDI--SFDSKMIITSSADK 595
Query: 169 TVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSC 222
+++W L C +L H + ++ S +D VV WD + C
Sbjct: 596 NIKIWGLDFGDCHKSLFAHQDSIMNVKFLPQSHNFFSCSKDAVVKYWDGEKFEC 649
Score = 123 (48.4 bits), Expect = 0.00083, P = 0.00083
Identities = 53/208 (25%), Positives = 82/208 (39%)
Query: 409 SGKILIVTGSKDNSVRLWDSE-----SRCCVGVGTGHMGAVGAVAF------SKKLQNFL 457
SG ++T + ++ V +WD + S+ G+ G A GA + K + L
Sbjct: 36 SGPGQLITSALED-VNIWDIKTGDLVSKLSDGLPPGASDARGAKPAECTYLEAHKDTDLL 94
Query: 458 VSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRT 517
G +D IKVW D +S N H I L + + +GS+D
Sbjct: 95 AVGYADGVIKVW--DLMSKTVLLNFN--------GHKAAITLLQFDGTGTRLISGSKDSN 144
Query: 518 ACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGH 577
VW L V + R HK I D ++ T S D IK+W + C++T H
Sbjct: 145 IIVWDLVGEVGLYKLRSHKDSITGFWCQGEDWLIST-SKDGMIKLWDLKTHQCIETHIAH 203
Query: 578 TSSVLRASFLTRGAQIVSCGADGLVKLW 605
T + +++ G D VK+W
Sbjct: 204 TGECW--GLAVKDDLLITTGTDSQVKIW 229
Score = 109 (43.4 bits), Expect = 6.3e-06, Sum P(2) = 6.3e-06
Identities = 37/132 (28%), Positives = 69/132 (52%)
Query: 48 SNASIKS-TIE--GGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGP 104
S A +K+ TIE G + ++ +S D+KLL ++ + +++W++ T KC+R+++ G
Sbjct: 376 SPAPLKTHTIELQGQRTDVRSIDISDDNKLLATASNG-SLKIWNIKTHKCIRTFEC--GY 432
Query: 105 AIGMACHPSGGLLATAGA-DRKVLVWDVDGGFCTHYFK-GHKGVVSSILFHPDTDKSLLF 162
A+ P GGLL G + ++ ++D+ + H + S+ D + L
Sbjct: 433 ALTCKFLP-GGLLVILGTRNGELQLFDLASSSLLDTIEDAHDAAIWSLDLTSDGKR--LV 489
Query: 163 SGSDDATVRVWD 174
+GS D TV+ WD
Sbjct: 490 TGSADKTVKFWD 501
Score = 107 (42.7 bits), Expect = 1.3e-29, Sum P(2) = 1.3e-29
Identities = 49/196 (25%), Positives = 82/196 (41%)
Query: 16 LQQFYGGGPLVVSSDGSFIACACGESINIVDLSNASIKSTIEGGSDTITALALSPDDKLL 75
L QF G G ++S GS +I + DL + D+IT +D L+
Sbjct: 126 LLQFDGTGTRLIS--GSK-----DSNIIVWDLVGEVGLYKLRSHKDSITGFWCQGEDWLI 178
Query: 76 FSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVD--- 132
S+ I++WDL T +C+ + H G G+A LL T G D +V +W +D
Sbjct: 179 -STSKDGMIKLWDLKTHQCIETHIAHTGECWGLAVKDD--LLITTGTDSQVKIWKLDIEN 235
Query: 133 ---GGFCTH---YFKGHK--GVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVAT- 183
GG T + K K G+ + + S + + D T+ + + ++ +A
Sbjct: 236 DKMGGKLTEMGIFEKQSKQRGLKIEFITNSSDKTSFFYIQNADKTIETFRIRKEEEIARG 295
Query: 184 LDKHFSRVTSMAITSD 199
L K R+ +T +
Sbjct: 296 LKKREKRLKEKGLTEE 311
Score = 103 (41.3 bits), Expect = 7.3e-11, Sum P(2) = 7.3e-11
Identities = 29/122 (23%), Positives = 55/122 (45%)
Query: 351 GYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSG 410
G+ I L+F G + ++ + + + V+DL Y L H + + T G
Sbjct: 119 GHKAAITLLQFDGTGTRLISGSKD-SNIIVWDLVGEVGLYKLRSHKDSI----TGFWCQG 173
Query: 411 KILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWS 470
+ +++ SKD ++LWD ++ C+ H G +A L L++ +D +K+W
Sbjct: 174 EDWLISTSKDGMIKLWDLKTHQCIETHIAHTGECWGLAVKDDL---LITTGTDSQVKIWK 230
Query: 471 FD 472
D
Sbjct: 231 LD 232
Score = 84 (34.6 bits), Expect = 3.2e-12, Sum P(2) = 3.2e-12
Identities = 21/81 (25%), Positives = 39/81 (48%)
Query: 347 KRLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCA 406
K L + + I+++KFL + + + + + V+ +D C L H V L A
Sbjct: 609 KSLFAHQDSIMNVKFLPQSHNFFSCSKDAV-VKYWDGEKFECIQKLYAHQSEVWAL-AVA 666
Query: 407 LSSGKILIVTGSKDNSVRLWD 427
G +V+ S D+S+R+W+
Sbjct: 667 TDGG--FVVSSSHDHSIRIWE 685
Score = 59 (25.8 bits), Expect = 5.7e-07, Sum P(2) = 5.7e-07
Identities = 15/71 (21%), Positives = 37/71 (52%)
Query: 156 TDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLW 215
+D + L + + + ++++W++ KC+ T + ++ +T + G +I R+ + L+
Sbjct: 400 SDDNKLLATASNGSLKIWNIKTHKCIRTFECGYA-LTCKFLPG-GLLVILGTRNGELQLF 457
Query: 216 DLRDYSCKLTV 226
DL S T+
Sbjct: 458 DLASSSLLDTI 468
>UNIPROTKB|J9PAK6 [details] [associations]
symbol:TBL3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0032040 "small-subunit processome"
evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR013934
InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
GO:GO:0006364 GO:GO:0032040 GeneTree:ENSGT00690000102183
EMBL:AAEX03004635 Ensembl:ENSCAFT00000048785 Uniprot:J9PAK6
Length = 346
Score = 394 (143.8 bits), Expect = 6.2e-36, P = 6.2e-36
Identities = 74/168 (44%), Positives = 105/168 (62%)
Query: 539 IWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGA 598
I + E SP DQV+ TAS D TIK+W++ D SCLKTFEGH +SVL+ F++RG Q++S G+
Sbjct: 66 ITAFELSPDDQVLATASADGTIKLWALQDFSCLKTFEGHDASVLKVVFVSRGTQLLSSGS 125
Query: 599 DGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLWHDSTXXXXXXX 658
DGLVKLWT++ EC+ T D HEDK+W L + + TG SD+ V LW D T
Sbjct: 126 DGLVKLWTIKNNECVKTLDAHEDKVWGLHCSRLDDRALTGASDSCVILWKDVTEEEQSEE 185
Query: 659 XXXXXXXVLRGQELENAVLDADYTKAIQVAFELRRPHKLFELFASVCR 706
V++ QEL+N + + Y +A+ +A L RPH + + ++ R
Sbjct: 186 QARREEEVVKQQELDNLLYEKRYLRALGLAISLDRPHTVLTVIQAIRR 233
Score = 234 (87.4 bits), Expect = 3.7e-17, P = 3.7e-17
Identities = 48/168 (28%), Positives = 87/168 (51%)
Query: 7 KKSYGCEPVLQQFYGGGPLVVSSDGSFIACACGESINIVDL-SNASIKSTIEGGSDTITA 65
K +Y E ++ FY GG + + G + C CG +N++D+ S A ++S + + ITA
Sbjct: 9 KANYAVERKMEPFYKGGKVQLDQTGQHVFCVCGTKVNVLDVASGAVLRSLEQEDQEDITA 68
Query: 66 LALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRK 125
LSPDD++L ++ I++W L CL++++GHD + + G L ++G+D
Sbjct: 69 FELSPDDQVLATASADGTIKLWALQDFSCLKTFEGHDASVLKVVFVSRGTQLLSSGSDGL 128
Query: 126 VLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVW 173
V +W + C H+ V + D++L +G+ D+ V +W
Sbjct: 129 VKLWTIKNNECVKTLDAHEDKVWGLHCSRLDDRAL--TGASDSCVILW 174
Score = 156 (60.0 bits), Expect = 4.2e-08, P = 4.2e-08
Identities = 36/119 (30%), Positives = 59/119 (49%)
Query: 495 KDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITA 554
+DI + ++P+D ++ T S D T +W L D + TF GH + V F ++++
Sbjct: 64 EDITAFELSPDDQVLATASADGTIKLWALQDFSCLKTFEGHDASVLKVVFVSRGTQLLSS 123
Query: 555 SGDKTIKIWSISDGSCLKTFEGHTSSV--LRASFLTRGAQIVSCGADGLVKLWTVRTGE 611
D +K+W+I + C+KT + H V L S L A ++ +D V LW T E
Sbjct: 124 GSDGLVKLWTIKNNECVKTLDAHEDKVWGLHCSRLDDRA--LTGASDSCVILWKDVTEE 180
Score = 150 (57.9 bits), Expect = 2.0e-07, P = 2.0e-07
Identities = 40/134 (29%), Positives = 62/134 (46%)
Query: 83 EIRVWDLSTLKCLRSWKGHDGPAI-GMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFK 141
++ V D+++ LRS + D I P +LATA AD + +W + C F+
Sbjct: 43 KVNVLDVASGAVLRSLEQEDQEDITAFELSPDDQVLATASADGTIKLWALQDFSCLKTFE 102
Query: 142 GHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGS 201
GH V ++F LL SGSD V++W + +CV TLD H +V + +
Sbjct: 103 GHDASVLKVVF-VSRGTQLLSSGSD-GLVKLWTIKNNECVKTLDAHEDKVWGLHCSRLDD 160
Query: 202 TLISAGRDKVVNLW 215
++ D V LW
Sbjct: 161 RALTGASDSCVILW 174
Score = 126 (49.4 bits), Expect = 9.0e-05, P = 9.0e-05
Identities = 24/79 (30%), Positives = 42/79 (53%)
Query: 152 FHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKV 211
F D +L + S D T+++W L C+ T + H + V + S G+ L+S+G D +
Sbjct: 69 FELSPDDQVLATASADGTIKLWALQDFSCLKTFEGHDASVLKVVFVSRGTQLLSSGSDGL 128
Query: 212 VNLWDLRDYSCKLTVPTYE 230
V LW +++ C T+ +E
Sbjct: 129 VKLWTIKNNECVKTLDAHE 147
>UNIPROTKB|G4MTR1 [details] [associations]
symbol:MGG_04746 "DOM34-interacting protein 2"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:CM001232
InterPro:IPR007148 Pfam:PF04003 KO:K14556 RefSeq:XP_003713707.1
ProteinModelPortal:G4MTR1 EnsemblFungi:MGG_04746T0 GeneID:2678069
KEGG:mgr:MGG_04746 Uniprot:G4MTR1
Length = 968
Score = 331 (121.6 bits), Expect = 1.9e-34, Sum P(2) = 1.9e-34
Identities = 146/572 (25%), Positives = 245/572 (42%)
Query: 113 SGGLLATAGADRKVLVWDVDGGFC--THYFKGHKGVVSSILFHPDTDKSLLFSGSDDATV 170
S G L T D + +WD+ FC TH + + G ++ +PD S + +D +
Sbjct: 186 SEGFLLTTAKDSLIKLWDLSSRFCIETHVAQTN-GECWALGVNPDF--SCCVTAGNDGEL 242
Query: 171 RVW--DLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNL--WDLRDYSCKLTV 226
+VW DL+A +T + S + I D TL +D+ V + RDY V
Sbjct: 243 KVWFIDLVALLS-STREVEVSHMGK--ILRDRGTLHRQSKDRAVEVRFHPRRDY---FAV 296
Query: 227 PTYEMVEAVCAIPPGSAFDSFLSSYNQQTIKKKRRSLEIHFITVGERGIVRMWNADSACL 286
E + I G+ L+ K+KRR + E+ + +AD A
Sbjct: 297 HGIEKSVEIWRIRSGAEVKKALAR------KRKRRREKQGAKGDAEKDVKE--DADEAA- 347
Query: 287 YEQKSSDVTISFEMDDSKR--GFTAATVLPSNQG-----LLCVTADQQLLLY--TTVEVP 337
+ +DV+ F + R G T + G L+ T + Q+ L+ TT +
Sbjct: 348 DDISKADVSDIFVLLVIVRTTGKTRSVDWALTHGTKDLQLVVGTTNNQIELWHVTTTKDK 407
Query: 338 EKKMEL--------ILSKRLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCS 389
EKK + LS L G+ +I + L +++ LA A N ++++++ + +C
Sbjct: 408 EKKSKKENAEDYTRALSIELPGHRADIRAIA-LSSDDRMLATAAN-GSLKIWNVRTQACI 465
Query: 390 YVL-AGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVA 448
G++ LC CA G ++V G+K + L+D S + T H GA+ ++
Sbjct: 466 RTFECGYA---LC---CAFLPGDKVVVVGTKTGELELFDVASTALLDSVTAHDGAIWSLH 519
Query: 449 FSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNL--KAKAV---VAAHGKDINSLAVA 503
++ +V+GS+D + K W F + + K K V V DI SL +
Sbjct: 520 VHPDGRS-VVTGSADKSAKFWDFRIVQEPVLGTTRTTPKLKLVQTRVLKVSDDILSLKFS 578
Query: 504 PNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIW 563
P+ ++ D T V+ L + GHK + S++ S +++IT+S DK IKIW
Sbjct: 579 PDAKMLAVALLDSTVKVFFADSLKLYLNLYGHKLPVLSMDISYDSKLIITSSADKNIKIW 638
Query: 564 SISDGSCLKTFEGHTSSVLRASFLTRGAQ-----IVSCGADGLVKLWTVRTGECIATYDK 618
+ G C K+ GH SVL+ +F+ A+ S D ++K W E I
Sbjct: 639 GLDFGDCHKSLFGHQDSVLQVAFIPHNAEGNGHHFFSTSKDRVIKYWDGDKFEQIQRLHG 698
Query: 619 HEDKIWALAVGKKTEMFATGGSDALVNLWHDS 650
H ++WALAV + D + +W ++
Sbjct: 699 HHGEVWALAVSHSGNFIVSASHDKSIRVWEET 730
Score = 196 (74.1 bits), Expect = 1.1e-11, P = 1.1e-11
Identities = 46/163 (28%), Positives = 78/163 (47%)
Query: 60 SDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLAT 119
SD I +L SPD K+L + ++V+ +LK + GH P + M L+ T
Sbjct: 569 SDDILSLKFSPDAKMLAVALLDSTVKVFFADSLKLYLNLYGHKLPVLSMDISYDSKLIIT 628
Query: 120 AGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSL---LFSGSDDATVRVWDLL 176
+ AD+ + +W +D G C GH+ V + F P + FS S D ++ WD
Sbjct: 629 SSADKNIKIWGLDFGDCHKSLFGHQDSVLQVAFIPHNAEGNGHHFFSTSKDRVIKYWDGD 688
Query: 177 AKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRD 219
+ + L H V ++A++ G+ ++SA DK + +W+ D
Sbjct: 689 KFEQIQRLHGHHGEVWALAVSHSGNFIVSASHDKSIRVWEETD 731
Score = 155 (59.6 bits), Expect = 6.1e-12, Sum P(2) = 6.1e-12
Identities = 67/312 (21%), Positives = 124/312 (39%)
Query: 80 HSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHY 139
HS+ + ST + W G++ G G + TA A+ +VL WDV G
Sbjct: 10 HSKSFGLVSSSTSNIV--WVGNESKGTG------AGRVVTA-ANEEVLCWDVKKGELLSR 60
Query: 140 FKGHKGVVS-SILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITS 198
++ K + + TD+ + G +D ++R+WD + + + H + +T +A
Sbjct: 61 WQDEKSKAQVTAIAQSKTDRDVFAVGYEDGSIRLWDSKIATIIVSFNGHRTAITHLAFDK 120
Query: 199 DGSTLISAGRDKVVNLWDLRDYSCKLTVPTY-EMVEAVCAIPPGSAFDSFLSSYNQQTIK 257
G+ L S +D V +WDL + + + + + +C I P + Q +
Sbjct: 121 SGTRLASGSKDTDVIVWDLVAEVGQYKLRGHKDQITGLCFIEPEPQTAEQEDAEEAQAMV 180
Query: 258 KKRRSLEIHFITVGERGIVRMWNADSACLYEQKSSDVTISFEMDDSKRGFTAATVLPSNQ 317
E +T + ++++W+ S E + F+ V N
Sbjct: 181 VDNEGSEGFLLTTAKDSLIKLWDLSSRFCIETHVAQTNGECWALGVNPDFSCC-VTAGND 239
Query: 318 GLLCVT-ADQQLLLYTTVEVPEKKMELILSKRLVGYNEE---ILDLKFLGEEEQYLAVAT 373
G L V D LL +T EV M IL R + + ++++F + Y AV
Sbjct: 240 GELKVWFIDLVALLSSTREVEVSHMGKILRDRGTLHRQSKDRAVEVRFHPRRD-YFAVHG 298
Query: 374 NIEQVQVYDLSS 385
+ V+++ + S
Sbjct: 299 IEKSVEIWRIRS 310
Score = 151 (58.2 bits), Expect = 8.2e-07, P = 8.2e-07
Identities = 66/249 (26%), Positives = 102/249 (40%)
Query: 25 LVVSSDGSFIACACGESINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREI 84
+ +SSD +A A S+ I ++ + T E G A P DK++ + E+
Sbjct: 437 IALSSDDRMLATAANGSLKIWNVRTQACIRTFECGY--ALCCAFLPGDKVVVVGTKTGEL 494
Query: 85 RVWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWD---VDGGFC--THY 139
++D+++ L S HDG + HP G + T AD+ WD V T
Sbjct: 495 ELFDVASTALLDSVTAHDGAIWSLHVHPDGRSVVTGSADKSAKFWDFRIVQEPVLGTTRT 554
Query: 140 FKGHKGVVSSILFHPDTDKSLLFSGSD--------DATVRVWDLLAKKCVATLDKHFSRV 191
K V + +L D SL FS D+TV+V+ + K L H V
Sbjct: 555 TPKLKLVQTRVLKVSDDILSLKFSPDAKMLAVALLDSTVKVFFADSLKLYLNLYGHKLPV 614
Query: 192 TSMAITSDGSTLISAGRDKVVNLWDLRDYSC-KLTVPTYEMVEAVCAIPPGSAFDS--FL 248
SM I+ D +I++ DK + +W L C K + V V IP + + F
Sbjct: 615 LSMDISYDSKLIITSSADKNIKIWGLDFGDCHKSLFGHQDSVLQVAFIPHNAEGNGHHFF 674
Query: 249 SSYNQQTIK 257
S+ + IK
Sbjct: 675 STSKDRVIK 683
Score = 126 (49.4 bits), Expect = 1.9e-34, Sum P(2) = 1.9e-34
Identities = 36/144 (25%), Positives = 63/144 (43%)
Query: 34 IACACGESINIVDLSNASIKSTI--EGGSDTITALALSPDDKLLFSSGHSR-EIRVWDLS 90
+ A E + D+ + S E +TA+A S D+ +F+ G+ IR+WD
Sbjct: 39 VVTAANEEVLCWDVKKGELLSRWQDEKSKAQVTAIAQSKTDRDVFAVGYEDGSIRLWDSK 98
Query: 91 TLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSI 150
+ S+ GH +A SG LA+ D V+VWD+ + +GHK ++ +
Sbjct: 99 IATIIVSFNGHRTAITHLAFDKSGTRLASGSKDTDVIVWDLVAEVGQYKLRGHKDQITGL 158
Query: 151 LFHPDTDKSLLFSGSDDATVRVWD 174
F ++ +++A V D
Sbjct: 159 CFIEPEPQTAEQEDAEEAQAMVVD 182
Score = 122 (48.0 bits), Expect = 2.1e-08, Sum P(2) = 2.1e-08
Identities = 34/132 (25%), Positives = 67/132 (50%)
Query: 43 NIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHD 102
N D + A + + G I A+ALS DD++L ++ + +++W++ T C+R+++
Sbjct: 415 NAEDYTRA-LSIELPGHRADIRAIALSSDDRMLATAANG-SLKIWNVRTQACIRTFEC-- 470
Query: 103 GPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLF 162
G A+ A P ++ ++ ++DV H G + S+ HPD +S++
Sbjct: 471 GYALCCAFLPGDKVVVVGTKTGELELFDVASTALLDSVTAHDGAIWSLHVHPD-GRSVV- 528
Query: 163 SGSDDATVRVWD 174
+GS D + + WD
Sbjct: 529 TGSADKSAKFWD 540
Score = 95 (38.5 bits), Expect = 6.1e-12, Sum P(2) = 6.1e-12
Identities = 27/121 (22%), Positives = 53/121 (43%)
Query: 447 VAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPND 506
+++ KL +++ S+D IK+W D D + + +V+ N+ N
Sbjct: 619 ISYDSKL---IITSSADKNIKIWGLD--FGDCHKSLFGHQDSVLQVAFIPHNAEG---NG 670
Query: 507 SLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSIS 566
+ S+DR W + GH +W++ S +++AS DK+I++W +
Sbjct: 671 HHFFSTSKDRVIKYWDGDKFEQIQRLHGHHGEVWALAVSHSGNFIVSASHDKSIRVWEET 730
Query: 567 D 567
D
Sbjct: 731 D 731
Score = 55 (24.4 bits), Expect = 8.2e-08, Sum P(2) = 8.2e-08
Identities = 12/39 (30%), Positives = 17/39 (43%)
Query: 613 IATYDKHEDKIWALAVGKKTEMFATGGSDALVNLWHDST 651
+ T K WAL G K G ++ + LWH +T
Sbjct: 365 VRTTGKTRSVDWALTHGTKDLQLVVGTTNNQIELWHVTT 403
>UNIPROTKB|Q0P593 [details] [associations]
symbol:WDR69 "Outer row dynein assembly protein 16 homolog"
species:9913 "Bos taurus" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:BC120334 IPI:IPI00712806 RefSeq:NP_001069398.1
UniGene:Bt.25265 ProteinModelPortal:Q0P593 PRIDE:Q0P593
GeneID:530118 KEGG:bta:530118 CTD:164781 HOGENOM:HOG000253909
HOVERGEN:HBG103651 InParanoid:Q0P593 OrthoDB:EOG44BB28
NextBio:20875184 Uniprot:Q0P593
Length = 415
Score = 334 (122.6 bits), Expect = 4.0e-33, Sum P(2) = 4.0e-33
Identities = 78/299 (26%), Positives = 144/299 (48%)
Query: 349 LVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALS 408
L G+ + + F +A + + +++ + + C + GH+ ++CL + +
Sbjct: 130 LEGHRNVVYAIAFNNPYGDKIATGSFDKTCKLWSVETGKCYHTFRGHTAEIVCL---SFN 186
Query: 409 SGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKV 468
L+ TGS D + +LWD +S V TGH + +++F+ N +++GS DHT+ V
Sbjct: 187 PQSTLVATGSMDTTAKLWDIQSGEEVFTLTGHSAEIISLSFNTS-GNRIITGSFDHTVTV 245
Query: 469 WSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVS 528
W D K ++ H +I+S + SL+ TGS D+T +W +
Sbjct: 246 WEAD---------TGRKVYTLIG-HCAEISSAVFNWDCSLILTGSMDKTCKLWDAVNGKC 295
Query: 529 VVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLT 588
V T GH I F +++ TAS D T +I+S + C+ EGH + + SF
Sbjct: 296 VATLTGHDDEILDSCFDYTGKLIATASADGTARIFSAATRECVTKLEGHEGEISKISFNP 355
Query: 589 RGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLW 647
+G ++++ +D ++W +TG+C+ + H D+I++ A K ++ TG D +W
Sbjct: 356 QGNRLLTGSSDKTARIWDAQTGQCLQVLEGHTDEIFSCAFNYKGDIIITGSKDNTCRIW 414
Score = 299 (110.3 bits), Expect = 2.0e-27, Sum P(2) = 2.0e-27
Identities = 76/273 (27%), Positives = 121/273 (44%)
Query: 379 QVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVGT 438
+++D +S + L GH +V + KI TGS D + +LW E+ C
Sbjct: 117 KLWDTASGEELHTLEGHRNVVYAIAFNNPYGDKI--ATGSFDKTCKLWSVETGKCYHTFR 174
Query: 439 GHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDIN 498
GH + ++F+ + + +GS D T K+W E+ L H +I
Sbjct: 175 GHTAEIVCLSFNPQ-STLVATGSMDTTAKLWDIQS----GEEVFTL------TGHSAEII 223
Query: 499 SLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDK 558
SL+ + + + TGS D T VW V T GH I S F+ +++T S DK
Sbjct: 224 SLSFNTSGNRIITGSFDHTVTVWEADTGRKVYTLIGHCAEISSAVFNWDCSLILTGSMDK 283
Query: 559 TIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDK 618
T K+W +G C+ T GH +L + F G I + ADG ++++ T EC+ +
Sbjct: 284 TCKLWDAVNGKCVATLTGHDDEILDSCFDYTGKLIATASADGTARIFSAATRECVTKLEG 343
Query: 619 HEDKIWALAVGKKTEMFATGGSDALVNLWHDST 651
HE +I ++ + TG SD +W T
Sbjct: 344 HEGEISKISFNPQGNRLLTGSSDKTARIWDAQT 376
Score = 288 (106.4 bits), Expect = 4.8e-23, P = 4.8e-23
Identities = 77/261 (29%), Positives = 117/261 (44%)
Query: 391 VLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFS 450
VL H +L L AL+ +TGS D + +LWD+ S + GH V A+AF+
Sbjct: 87 VLRAH---ILPLTNVALNKSGSCFITGSYDRTCKLWDTASGEELHTLEGHRNVVYAIAFN 143
Query: 451 KKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVC 510
+ + +GS D T K+WS + K H +I L+ P +LV
Sbjct: 144 NPYGDKIATGSFDKTCKLWSVE----------TGKCYHTFRGHTAEIVCLSFNPQSTLVA 193
Query: 511 TGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSC 570
TGS D TA +W + V T GH I S+ F+ +IT S D T+ +W G
Sbjct: 194 TGSMDTTAKLWDIQSGEEVFTLTGHSAEIISLSFNTSGNRIITGSFDHTVTVWEADTGRK 253
Query: 571 LKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGK 630
+ T GH + + A F + I++ D KLW G+C+AT H+D+I
Sbjct: 254 VYTLIGHCAEISSAVFNWDCSLILTGSMDKTCKLWDAVNGKCVATLTGHDDEILDSCFDY 313
Query: 631 KTEMFATGGSDALVNLWHDST 651
++ AT +D ++ +T
Sbjct: 314 TGKLIATASADGTARIFSAAT 334
Score = 226 (84.6 bits), Expect = 1.0e-15, P = 1.0e-15
Identities = 80/338 (23%), Positives = 151/338 (44%)
Query: 99 KGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFH-PDTD 157
+ H P +A + SG T DR +WD G H +GH+ VV +I F+ P D
Sbjct: 89 RAHILPLTNVALNKSGSCFITGSYDRTCKLWDTASGEELHTLEGHRNVVYAIAFNNPYGD 148
Query: 158 KSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGR-DKVVNLWD 216
K + +GS D T ++W + KC T H + + ++ STL++ G D LWD
Sbjct: 149 K--IATGSFDKTCKLWSVETGKCYHTFRGHTAEIVCLSFNPQ-STLVATGSMDTTAKLWD 205
Query: 217 LRDYSCKLTVPTYEMVEAVCAIPPGSAFDSFLSSYNQQ-TIKKKRRSLEIHFITVGERGI 275
++ T+ T E + S S++ T+ + +++ + +G
Sbjct: 206 IQSGEEVFTL-TGHSAEIISLSFNTSGNRIITGSFDHTVTVWEADTGRKVYTL-IGHCAE 263
Query: 276 VR--MWNADSACLYEQKSSDVTISFEMDDSKRGFTAATVLPSNQGLL--CVTADQQLLLY 331
+ ++N D + + S D T ++ D+ G AT+ + +L C +L+
Sbjct: 264 ISSAVFNWDCSLILTG-SMDKTC--KLWDAVNGKCVATLTGHDDEILDSCFDYTGKLIAT 320
Query: 332 TTVEVPEKKMELILSK---RLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSC 388
+ + + + +L G+ EI + F + + L +++ + +++D + C
Sbjct: 321 ASADGTARIFSAATRECVTKLEGHEGEISKISFNPQGNRLLTGSSD-KTARIWDAQTGQC 379
Query: 389 SYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLW 426
VL GH++ + +CA + +I+TGSKDN+ R+W
Sbjct: 380 LQVLEGHTDEIF---SCAFNYKGDIIITGSKDNTCRIW 414
Score = 222 (83.2 bits), Expect = 2.9e-15, P = 2.9e-15
Identities = 54/209 (25%), Positives = 100/209 (47%)
Query: 25 LVVSSDGS-FIACACGESINIVDLSNASIKSTIEGGSDTITALALS-P-DDKLLFSSGHS 81
+ ++ GS FI + + + D ++ T+EG + + A+A + P DK+ S
Sbjct: 98 VALNKSGSCFITGSYDRTCKLWDTASGEELHTLEGHRNVVYAIAFNNPYGDKIATGS-FD 156
Query: 82 REIRVWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFK 141
+ ++W + T KC +++GH + ++ +P L+AT D +WD+ G
Sbjct: 157 KTCKLWSVETGKCYHTFRGHTAEIVCLSFNPQSTLVATGSMDTTAKLWDIQSGEEVFTLT 216
Query: 142 GHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGS 201
GH + S+ F+ T + + +GS D TV VW+ + V TL H + ++S D S
Sbjct: 217 GHSAEIISLSFN--TSGNRIITGSFDHTVTVWEADTGRKVYTLIGHCAEISSAVFNWDCS 274
Query: 202 TLISAGRDKVVNLWDLRDYSCKLTVPTYE 230
+++ DK LWD + C T+ ++
Sbjct: 275 LILTGSMDKTCKLWDAVNGKCVATLTGHD 303
Score = 214 (80.4 bits), Expect = 2.3e-14, P = 2.3e-14
Identities = 44/161 (27%), Positives = 76/161 (47%)
Query: 55 TIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPSG 114
T+ G I++ + D L+ + + ++WD KC+ + GHD + +G
Sbjct: 256 TLIGHCAEISSAVFNWDCSLILTGSMDKTCKLWDAVNGKCVATLTGHDDEILDSCFDYTG 315
Query: 115 GLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWD 174
L+ATA AD ++ C +GH+G +S I F+P ++ L +GS D T R+WD
Sbjct: 316 KLIATASADGTARIFSAATRECVTKLEGHEGEISKISFNPQGNR--LLTGSSDKTARIWD 373
Query: 175 LLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLW 215
+C+ L+ H + S A G +I+ +D +W
Sbjct: 374 AQTGQCLQVLEGHTDEIFSCAFNYKGDIIITGSKDNTCRIW 414
Score = 213 (80.0 bits), Expect = 3.3e-28, Sum P(2) = 3.3e-28
Identities = 42/155 (27%), Positives = 83/155 (53%)
Query: 63 ITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACH-PSGGLLATAG 121
+T +AL+ + + R ++WD ++ + L + +GH +A + P G +AT
Sbjct: 95 LTNVALNKSGSCFITGSYDRTCKLWDTASGEELHTLEGHRNVVYAIAFNNPYGDKIATGS 154
Query: 122 ADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCV 181
D+ +W V+ G C H F+GH + + F+P + +L+ +GS D T ++WD+ + + V
Sbjct: 155 FDKTCKLWSVETGKCYHTFRGHTAEIVCLSFNPQS--TLVATGSMDTTAKLWDIQSGEEV 212
Query: 182 ATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWD 216
TL H + + S++ + G+ +I+ D V +W+
Sbjct: 213 FTLTGHSAEIISLSFNTSGNRIITGSFDHTVTVWE 247
Score = 202 (76.2 bits), Expect = 5.1e-13, P = 5.1e-13
Identities = 48/189 (25%), Positives = 84/189 (44%)
Query: 55 TIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPSG 114
T G + I L+ +P L+ + ++WD+ + + + + GH I ++ + SG
Sbjct: 172 TFRGHTAEIVCLSFNPQSTLVATGSMDTTAKLWDIQSGEEVFTLTGHSAEIISLSFNTSG 231
Query: 115 GLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWD 174
+ T D V VW+ D G + GH +SS +F+ D SL+ +GS D T ++WD
Sbjct: 232 NRIITGSFDHTVTVWEADTGRKVYTLIGHCAEISSAVFNWDC--SLILTGSMDKTCKLWD 289
Query: 175 LLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYE-MVE 233
+ KCVATL H + G + +A D ++ C + +E +
Sbjct: 290 AVNGKCVATLTGHDDEILDSCFDYTGKLIATASADGTARIFSAATRECVTKLEGHEGEIS 349
Query: 234 AVCAIPPGS 242
+ P G+
Sbjct: 350 KISFNPQGN 358
Score = 177 (67.4 bits), Expect = 3.3e-28, Sum P(2) = 3.3e-28
Identities = 52/174 (29%), Positives = 88/174 (50%)
Query: 349 LVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALS 408
L+G+ EI F + L + + + +++D + C L GH + +L D+C
Sbjct: 257 LIGHCAEISSAVFNWDCSLILTGSMD-KTCKLWDAVNGKCVATLTGHDDEIL--DSCFDY 313
Query: 409 SGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKV 468
+GK LI T S D + R++ + +R CV GH G + ++F+ + N L++GSSD T ++
Sbjct: 314 TGK-LIATASADGTARIFSAATRECVTKLEGHEGEISKISFNPQ-GNRLLTGSSDKTARI 371
Query: 469 WSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWR 522
W DA+ L+ V+ H +I S A ++ TGS+D T +WR
Sbjct: 372 W-------DAQTGQCLQ---VLEGHTDEIFSCAFNYKGDIIITGSKDNTCRIWR 415
Score = 171 (65.3 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 38/177 (21%), Positives = 72/177 (40%)
Query: 46 DLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPA 105
D+ + T+ G S I +L+ + + + + VW+ T + + + GH
Sbjct: 205 DIQSGEEVFTLTGHSAEIISLSFNTSGNRIITGSFDHTVTVWEADTGRKVYTLIGHCAEI 264
Query: 106 IGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGS 165
+ L+ T D+ +WD G C GH + F D L+ + S
Sbjct: 265 SSAVFNWDCSLILTGSMDKTCKLWDAVNGKCVATLTGHDDEILDSCF--DYTGKLIATAS 322
Query: 166 DDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSC 222
D T R++ ++CV L+ H ++ ++ G+ L++ DK +WD + C
Sbjct: 323 ADGTARIFSAATRECVTKLEGHEGEISKISFNPQGNRLLTGSSDKTARIWDAQTGQC 379
Score = 163 (62.4 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 34/128 (26%), Positives = 59/128 (46%)
Query: 46 DLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPA 105
D N +T+ G D I KL+ ++ R++ +T +C+ +GH+G
Sbjct: 289 DAVNGKCVATLTGHDDEILDSCFDYTGKLIATASADGTARIFSAATRECVTKLEGHEGEI 348
Query: 106 IGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGS 165
++ +P G L T +D+ +WD G C +GH + S F+ D ++ +GS
Sbjct: 349 SKISFNPQGNRLLTGSSDKTARIWDAQTGQCLQVLEGHTDEIFSCAFNYKGD--IIITGS 406
Query: 166 DDATVRVW 173
D T R+W
Sbjct: 407 KDNTCRIW 414
Score = 59 (25.8 bits), Expect = 4.0e-33, Sum P(2) = 4.0e-33
Identities = 11/33 (33%), Positives = 17/33 (51%)
Query: 184 LDKHFSRVTSMAITSDGSTLISAGRDKVVNLWD 216
L H +T++A+ GS I+ D+ LWD
Sbjct: 88 LRAHILPLTNVALNKSGSCFITGSYDRTCKLWD 120
>ASPGD|ASPL0000054401 [details] [associations]
symbol:AN0305 species:162425 "Emericella nidulans"
[GO:0034388 "Pwp2p-containing subcomplex of 90S preribosome"
evidence=IEA] [GO:0032040 "small-subunit processome" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0030515 "snoRNA binding"
evidence=IEA] [GO:0000472 "endonucleolytic cleavage to generate
mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IEA] [GO:0000447 "endonucleolytic cleavage in ITS1 to
separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0000480 "endonucleolytic cleavage in 5'-ETS of tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 PROSITE:PS00678 InterPro:IPR019775 EMBL:BN001308
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003676
GO:GO:0030529 EMBL:AACD01000006 InterPro:IPR007148 Pfam:PF04003
HOGENOM:HOG000212524 KO:K14556 OMA:SIFAHDD OrthoDB:EOG4N07P3
RefSeq:XP_657909.1 ProteinModelPortal:Q5BGM5 STRING:Q5BGM5
EnsemblFungi:CADANIAT00002409 GeneID:2876084 KEGG:ani:AN0305.2
Uniprot:Q5BGM5
Length = 963
Score = 276 (102.2 bits), Expect = 2.8e-31, Sum P(2) = 2.8e-31
Identities = 87/350 (24%), Positives = 159/350 (45%)
Query: 319 LLCVTADQQLLLYTTVEVPEK-KME------LILSKRLVGYNEEILDLKFLGEEEQYLAV 371
LL T + QL Y+ + +K K E L+ + G+ +I + L +++ LA
Sbjct: 384 LLAATTNNQLEAYSVTTLNKKSKSEGDVEYNRTLAIDIPGHRTDIRSVA-LSSDDRMLAS 442
Query: 372 ATNIEQVQVYDLSSMSCSYVL-AGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSES 430
A+N ++V+++ + +C L G++ LC A G ++V G+KD + ++D S
Sbjct: 443 ASN-GSLKVWNVRTQNCLRTLECGYA---LC---SAFLPGDKIVVVGNKDGELEIFDIAS 495
Query: 431 RCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDD--AEQPMNLKAKA 488
+ H G V ++ ++ LVSGS+D + K W+F + ++ + + +
Sbjct: 496 STLLDTIKAHDGPVWSLQVHPDGKS-LVSGSADKSAKFWNFQVVQEEIPGTKRTTPRLRL 554
Query: 489 VVAAHGK---DINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFS 545
V K DI S+ +P+ L+ D T V+ L + GHK + +++ S
Sbjct: 555 VHTRTLKVSDDILSVRFSPDARLLAVALLDNTVKVFFNDSLKLFLNLYGHKLPVLNMDIS 614
Query: 546 PVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLT-----RGAQIVSCGADG 600
++++T S DKT+++W + G C K+F H S++ +F+ G S D
Sbjct: 615 WDSKLIVTCSADKTVRLWGLDFGDCHKSFLAHEDSIMAVAFVPSNNEGNGHNFFSVSKDR 674
Query: 601 LVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLWHDS 650
++K W E I H +IWA+A+ E T D + W +
Sbjct: 675 VIKYWDGDKFEHIQKLSGHHGEIWAMAISHTGEFIVTASHDKSIRTWEQT 724
Score = 192 (72.6 bits), Expect = 3.0e-11, P = 3.0e-11
Identities = 45/163 (27%), Positives = 77/163 (47%)
Query: 60 SDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLAT 119
SD I ++ SPD +LL + ++V+ +LK + GH P + M L+ T
Sbjct: 563 SDDILSVRFSPDARLLAVALLDNTVKVFFNDSLKLFLNLYGHKLPVLNMDISWDSKLIVT 622
Query: 120 AGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSL---LFSGSDDATVRVWDLL 176
AD+ V +W +D G C F H+ + ++ F P ++ FS S D ++ WD
Sbjct: 623 CSADKTVRLWGLDFGDCHKSFLAHEDSIMAVAFVPSNNEGNGHNFFSVSKDRVIKYWDGD 682
Query: 177 AKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRD 219
+ + L H + +MAI+ G +++A DK + W+ D
Sbjct: 683 KFEHIQKLSGHHGEIWAMAISHTGEFIVTASHDKSIRTWEQTD 725
Score = 166 (63.5 bits), Expect = 9.3e-08, Sum P(2) = 9.3e-08
Identities = 63/252 (25%), Positives = 106/252 (42%)
Query: 25 LVVSSDGSFIACACGESINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREI 84
+ +SSD +A A S+ + ++ + T+E G +A P DK++ E+
Sbjct: 431 VALSSDDRMLASASNGSLKVWNVRTQNCLRTLECGYALCSAFL--PGDKIVVVGNKDGEL 488
Query: 85 RVWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVW-------DVDGG--- 134
++D+++ L + K HDGP + HP G L + AD+ W ++ G
Sbjct: 489 EIFDIASSTLLDTIKAHDGPVWSLQVHPDGKSLVSGSADKSAKFWNFQVVQEEIPGTKRT 548
Query: 135 ------FCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHF 188
T K ++S + F PD LL D TV+V+ + K L H
Sbjct: 549 TPRLRLVHTRTLKVSDDILS-VRFSPDA--RLLAVALLDNTVKVFFNDSLKLFLNLYGHK 605
Query: 189 SRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYE-MVEAVCAIPPGSAFD-- 245
V +M I+ D +++ DK V LW L C + +E + AV +P + +
Sbjct: 606 LPVLNMDISWDSKLIVTCSADKTVRLWGLDFGDCHKSFLAHEDSIMAVAFVPSNNEGNGH 665
Query: 246 SFLSSYNQQTIK 257
+F S + IK
Sbjct: 666 NFFSVSKDRVIK 677
Score = 154 (59.3 bits), Expect = 2.8e-31, Sum P(2) = 2.8e-31
Identities = 42/168 (25%), Positives = 76/168 (45%)
Query: 63 ITALALSPDDKLLFSSGHSR-EIRVWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAG 121
+T + S D+ +F+ G+ IR+WD T + S+ GH +A +G LA+
Sbjct: 75 VTVITQSKTDEDIFAVGYEDGSIRLWDSRTETVMISFNGHKSAITQLAFDNAGVRLASGS 134
Query: 122 ADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSL-----------LFSGSDDATV 170
D +++WD+ +GH ++S+ F T + L L + DA +
Sbjct: 135 RDTNIILWDLISEVGLFKLRGHTDQITSLHFLVPTLELLNEAGLSEHAGFLITTGKDALI 194
Query: 171 RVWDLLAKKCVAT-LDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDL 217
+VWDL ++ C+ T + + S+ + D S I+ G D + W +
Sbjct: 195 KVWDLASQHCIETHIAQSNGECWSLGLAPDQSGCITGGNDGELKAWSI 242
Score = 152 (58.6 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 47/185 (25%), Positives = 77/185 (41%)
Query: 413 LIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFD 472
+ G +D S+RLWDS + + GH A+ +AF L SGS D I +W D
Sbjct: 87 IFAVGYEDGSIRLWDSRTETVMISFNGHKSAITQLAFDNAGVR-LASGSRDTNIILW--D 143
Query: 473 GLSDDAEQPMNLKAKAVVAAHG-----KDINSLAVAPNDSLVCTGSQDRTACVWRLPDLV 527
+S+ + + + H + +N ++ + + T +D VW L
Sbjct: 144 LISEVGLFKLRGHTDQITSLHFLVPTLELLNEAGLSEHAGFLITTGKDALIKVWDLASQH 203
Query: 528 SVVTFRGHKRG-IWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASF 586
+ T G WS+ +P IT D +K WSI +G+ ++ + T S R
Sbjct: 204 CIETHIAQSNGECWSLGLAPDQSGCITGGNDGELKAWSIDEGAMIEISKEKTGSENRRIL 263
Query: 587 LTRGA 591
RG+
Sbjct: 264 ADRGS 268
Score = 150 (57.9 bits), Expect = 1.5e-12, Sum P(2) = 1.5e-12
Identities = 39/126 (30%), Positives = 66/126 (52%)
Query: 49 NASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGM 108
N ++ I G I ++ALS DD++L S+ + ++VW++ T CLR+ + G A+
Sbjct: 414 NRTLAIDIPGHRTDIRSVALSSDDRMLASASNG-SLKVWNVRTQNCLRTLEC--GYALCS 470
Query: 109 ACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDA 168
A P ++ D ++ ++D+ K H G V S+ HPD KSL+ SGS D
Sbjct: 471 AFLPGDKIVVVGNKDGELEIFDIASSTLLDTIKAHDGPVWSLQVHPD-GKSLV-SGSADK 528
Query: 169 TVRVWD 174
+ + W+
Sbjct: 529 SAKFWN 534
Score = 132 (51.5 bits), Expect = 5.6e-29, Sum P(2) = 5.6e-29
Identities = 33/121 (27%), Positives = 55/121 (45%)
Query: 98 WKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVS-SILFHPDT 156
W D AI +G + GA +VL WD+ G +K +++ T
Sbjct: 26 WVRDD--AIAGISRQTGAGRSVVGAGEEVLCWDIKKGELLGRWKDSACRAQVTVITQSKT 83
Query: 157 DKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWD 216
D+ + G +D ++R+WD + + + + H S +T +A + G L S RD + LWD
Sbjct: 84 DEDIFAVGYEDGSIRLWDSRTETVMISFNGHKSAITQLAFDNAGVRLASGSRDTNIILWD 143
Query: 217 L 217
L
Sbjct: 144 L 144
Score = 132 (51.5 bits), Expect = 9.2e-05, P = 9.2e-05
Identities = 34/157 (21%), Positives = 64/157 (40%)
Query: 505 NDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWS 564
++ + G +D + +W +++F GHK I + F + + S D I +W
Sbjct: 84 DEDIFAVGYEDGSIRLWDSRTETVMISFNGHKSAITQLAFDNAGVRLASGSRDTNIILWD 143
Query: 565 ISDGSCLKTFEGHTSSVLRASFLTRGAQI-------------VSCGADGLVKLWTVRTGE 611
+ L GHT + FL ++ ++ G D L+K+W + +
Sbjct: 144 LISEVGLFKLRGHTDQITSLHFLVPTLELLNEAGLSEHAGFLITTGKDALIKVWDLASQH 203
Query: 612 CIATYDKHED-KIWALAVGKKTEMFATGGSDALVNLW 647
CI T+ + + W+L + TGG+D + W
Sbjct: 204 CIETHIAQSNGECWSLGLAPDQSGCITGGNDGELKAW 240
Score = 125 (49.1 bits), Expect = 3.0e-28, Sum P(2) = 3.0e-28
Identities = 38/160 (23%), Positives = 64/160 (40%)
Query: 79 GHSREIRVWDLSTLKCLRSWKGHDGPA---IGMACHPSGGLLATAGADRKVLVWDVDGGF 135
G E+ WD+ + L WK A + + A D + +WD
Sbjct: 47 GAGEEVLCWDIKKGELLGRWKDSACRAQVTVITQSKTDEDIFAVGYEDGSIRLWDSRTET 106
Query: 136 CTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSM- 194
F GHK ++ + F D L SGS D + +WDL+++ + L H ++TS+
Sbjct: 107 VMISFNGHKSAITQLAF--DNAGVRLASGSRDTNIILWDLISEVGLFKLRGHTDQITSLH 164
Query: 195 ------------AITSDGSTLISAGRDKVVNLWDLRDYSC 222
++ LI+ G+D ++ +WDL C
Sbjct: 165 FLVPTLELLNEAGLSEHAGFLITTGKDALIKVWDLASQHC 204
Score = 106 (42.4 bits), Expect = 5.6e-13, Sum P(2) = 5.6e-13
Identities = 38/158 (24%), Positives = 72/158 (45%)
Query: 413 LIVTGSKDNSVRLWDSES-RCCVGVGTGHMGAV--GAVAFSKKLQNFLVSGSSDHTIKVW 469
L+ DN+V+++ ++S + + + GH V +++ KL +V+ S+D T+++W
Sbjct: 577 LLAVALLDNTVKVFFNDSLKLFLNL-YGHKLPVLNMDISWDSKL---IVTCSADKTVRLW 632
Query: 470 SFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSV 529
D D + +++A N+ N V S+DR W +
Sbjct: 633 GLD--FGDCHKSFLAHEDSIMAVAFVPSNNEGNGHNFFSV---SKDRVIKYWDGDKFEHI 687
Query: 530 VTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISD 567
GH IW++ S + ++TAS DK+I+ W +D
Sbjct: 688 QKLSGHHGEIWAMAISHTGEFIVTASHDKSIRTWEQTD 725
Score = 102 (41.0 bits), Expect = 7.7e-26, Sum P(2) = 7.7e-26
Identities = 44/191 (23%), Positives = 75/191 (39%)
Query: 41 SINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKG 100
SI + D ++ + G IT LA L S I +WDL + L +G
Sbjct: 96 SIRLWDSRTETVMISFNGHKSAITQLAFDNAGVRLASGSRDTNIILWDLISEVGLFKLRG 155
Query: 101 HDG---------PAI------GMACHPSGGLLATAGADRKVLVWDVDGGFC--THYFKGH 143
H P + G++ H G L T G D + VWD+ C TH + +
Sbjct: 156 HTDQITSLHFLVPTLELLNEAGLSEH--AGFLITTGKDALIKVWDLASQHCIETHIAQSN 213
Query: 144 KGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTL 203
G S+ PD +S +G +D ++ W + + + + K + + I +D +
Sbjct: 214 -GECWSLGLAPD--QSGCITGGNDGELKAWSI-DEGAMIEISKEKTGSENRRILADRGSF 269
Query: 204 ISAGRDKVVNL 214
G+D+ +
Sbjct: 270 YRNGKDRTTGI 280
Score = 97 (39.2 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 57/290 (19%), Positives = 109/290 (37%)
Query: 351 GYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCL-------- 402
G+ I L F + LA + + ++DL S + L GH++ + L
Sbjct: 113 GHKSAITQLAFDNAGVR-LASGSRDTNIILWDLISEVGLFKLRGHTDQITSLHFLVPTLE 171
Query: 403 --DTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKL---QNFL 457
+ LS ++T KD +++WD S+ C+ H+ +S L Q+
Sbjct: 172 LLNEAGLSEHAGFLITTGKDALIKVWDLASQHCIET---HIAQSNGECWSLGLAPDQSGC 228
Query: 458 VSGSSDHTIKVWSFD--GLSDDAEQPMNLKAKAVVA------AHGKD-INSLAVAPNDSL 508
++G +D +K WS D + + +++ + + ++A +GKD ++ P
Sbjct: 229 ITGGNDGELKAWSIDEGAMIEISKEKTGSENRRILADRGSFYRNGKDRTTGISFHPRADY 288
Query: 509 VCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSV-EFSPVDQVVITASGDKTIKIWS-IS 566
V ++ +WR+ V KR E + TA + K +S
Sbjct: 289 VAFHGSEKAVEIWRIRSETEVQKSLARKRKRRKEKEAQRAAETGETAEKTENGKAEDDVS 348
Query: 567 DGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATY 616
+ F HT ++R R + + G ++L T + Y
Sbjct: 349 TAPVTEVFVSHT--IVRTGGKVRSFDWIRTKSSGKIQLLAATTNNQLEAY 396
Score = 71 (30.1 bits), Expect = 0.00029, Sum P(2) = 0.00029
Identities = 42/198 (21%), Positives = 81/198 (40%)
Query: 253 QQTIKKKRRSLEIHFITVGERGIVRMWNADSACLYEQKSSDVTISFEMDDSKRGFTAATV 312
Q T+ + ++ E F E G +R+W DS ++ V ISF + K T
Sbjct: 74 QVTVITQSKTDEDIFAVGYEDGSIRLW--DS------RTETVMISF--NGHKSAITQLAF 123
Query: 313 LPSNQGLLCVTADQQLLLYTTV-EVPEKKM----ELILSKRLVGYNEEILDLKFLGEEEQ 367
+ L + D ++L+ + EV K+ + I S + E+L+ L E
Sbjct: 124 DNAGVRLASGSRDTNIILWDLISEVGLFKLRGHTDQITSLHFLVPTLELLNEAGLSEHAG 183
Query: 368 YLAVATNIEQVQVYDLSSMSC--SYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRL 425
+L ++V+DL+S C +++ + E C + L+ + +TG D ++
Sbjct: 184 FLITTGKDALIKVWDLASQHCIETHIAQSNGE---CW-SLGLAPDQSGCITGGNDGELKA 239
Query: 426 WDSESRCCVGVGTGHMGA 443
W + + + G+
Sbjct: 240 WSIDEGAMIEISKEKTGS 257
Score = 62 (26.9 bits), Expect = 0.00011, Sum P(3) = 0.00011
Identities = 18/56 (32%), Positives = 30/56 (53%)
Query: 187 HFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYEMVEAVC-AIPPG 241
H + + S+A++SD L SA + +W++R +C + T E A+C A PG
Sbjct: 424 HRTDIRSVALSSDDRMLASASNGSL-KVWNVRTQNC---LRTLECGYALCSAFLPG 475
Score = 57 (25.1 bits), Expect = 3.8e-21, Sum P(2) = 3.8e-21
Identities = 21/79 (26%), Positives = 37/79 (46%)
Query: 95 LRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHP 154
L++W +G I ++ +G +R++L D G +++ K + I FHP
Sbjct: 237 LKAWSIDEGAMIEISKEKTGS------ENRRILA---DRG---SFYRNGKDRTTGISFHP 284
Query: 155 DTDKSLLFSGSDDATVRVW 173
D + F GS+ A V +W
Sbjct: 285 RADY-VAFHGSEKA-VEIW 301
Score = 45 (20.9 bits), Expect = 6.9e-20, Sum P(2) = 6.9e-20
Identities = 7/25 (28%), Positives = 15/25 (60%)
Query: 107 GMACHPSGGLLATAGADRKVLVWDV 131
G++ HP +A G+++ V +W +
Sbjct: 279 GISFHPRADYVAFHGSEKAVEIWRI 303
Score = 43 (20.2 bits), Expect = 9.3e-08, Sum P(2) = 9.3e-08
Identities = 21/90 (23%), Positives = 34/90 (37%)
Query: 266 HFITVGERGIVRMWNADSACLYEQKSSDVTISFEMDDSKRGFTAATVLPSNQGLLCVTAD 325
+F +V + +++ W+ D ++ S + M S G T D
Sbjct: 666 NFFSVSKDRVIKYWDGDKFEHIQKLSGHHGEIWAMAISHTGEFIVTASHDKSIRTWEQTD 725
Query: 326 QQLLLYTTVEVPEKKMELILSKRLVGYNEE 355
+QL L E EK++E I L EE
Sbjct: 726 EQLFLE---EEREKELEEIYDNNLAASLEE 752
Score = 38 (18.4 bits), Expect = 3.7e-19, Sum P(2) = 3.7e-19
Identities = 7/34 (20%), Positives = 13/34 (38%)
Query: 54 STIEGGSDTITALALSPDDKLLFSSGHSREIRVW 87
S G D T ++ P + G + + +W
Sbjct: 268 SFYRNGKDRTTGISFHPRADYVAFHGSEKAVEIW 301
Score = 37 (18.1 bits), Expect = 7.3e-06, Sum P(2) = 7.3e-06
Identities = 7/32 (21%), Positives = 15/32 (46%)
Query: 616 YDKHEDKIWALAVGKKTEMFATGGSDALVNLW 647
Y +D+ ++ + + A GS+ V +W
Sbjct: 270 YRNGKDRTTGISFHPRADYVAFHGSEKAVEIW 301
>DICTYBASE|DDB_G0295761 [details] [associations]
symbol:nle1 "putative notchless" species:44689
"Dictyostelium discoideum" [GO:0008150 "biological_process"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0003674 "molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0295761 InterPro:IPR001632
GO:GO:0005634 EMBL:AAFI02000005 GenomeReviews:CM000150_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 PRINTS:PR00319
KO:K14855 OMA:HFTCKGH InterPro:IPR012972 Pfam:PF08154
RefSeq:XP_002649195.1 ProteinModelPortal:C7FZX3
EnsemblProtists:DDB0252725 GeneID:8616962 KEGG:ddi:DDB_G0295761
Uniprot:C7FZX3
Length = 507
Score = 237 (88.5 bits), Expect = 3.3e-31, Sum P(2) = 3.3e-31
Identities = 69/246 (28%), Positives = 115/246 (46%)
Query: 404 TCALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSD 463
TC G+ LI +GS+D +VR++++ V V GH V +A + L +GS D
Sbjct: 276 TCLKWGGEGLIYSGSQDRTVRVFNTTDGRLVRVLDGHAHWVNTLALNTDY--VLRTGSYD 333
Query: 464 HTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRL 523
HT K +D L + A+ V D+ A + ++ +GS D T +W
Sbjct: 334 HTGK--EYDTLEE---------AQRVALERYNDVK--AKSKGMEILISGSDDFTVIMWN- 379
Query: 524 PDLV--SVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSV 581
P + S+ GH++ I V FSP + +AS DK+IK+W G L F GH +V
Sbjct: 380 PSVTKTSISRLTGHQQLINLVSFSPDGRYFASASFDKSIKLWDGQSGKFLGNFRGHVGAV 439
Query: 582 LRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSD 641
+ + + +VS D +K+W ++T + H D+++ + + A+G D
Sbjct: 440 YQVCWSSDSRYLVSGSKDSTLKIWDIKTKKMEKELPGHADEVYTVDWSPDGDRVASGSKD 499
Query: 642 ALVNLW 647
L+ +W
Sbjct: 500 RLLRIW 505
Score = 184 (69.8 bits), Expect = 3.3e-31, Sum P(2) = 3.3e-31
Identities = 47/170 (27%), Positives = 80/170 (47%)
Query: 54 STIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPS 113
S++ G ++ + A SPD K S G +R+WD+ T + KGH + +A P
Sbjct: 134 SSMSGHTEAVLNCAFSPDGKGFVSVGGDTTVRIWDIYTSTPTHTLKGHTNWVLQVAWSPD 193
Query: 114 GGLLATAGADRKVLVW-DVDGGFCTHYFKGHKGVVSSIL---FHPDTDKSLLFSGSDDAT 169
+ATAG + + +W G KGH ++ + FH + L S S D+T
Sbjct: 194 SKKIATAGMEGDIRIWCPQTGKQLGSTLKGHTKFITGLSWEPFHLNPKCVRLASSSKDST 253
Query: 170 VRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRD 219
+R+WD + K + +L H VT + +G + S +D+ V +++ D
Sbjct: 254 IRIWDTESCKNLMSLSGHTMSVTCLKWGGEG-LIYSGSQDRTVRVFNTTD 302
Score = 178 (67.7 bits), Expect = 2.3e-12, Sum P(2) = 2.3e-12
Identities = 56/214 (26%), Positives = 103/214 (48%)
Query: 28 SSDGS-FIACACGESINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRV 86
S DG F++ ++ I D+ ++ T++G ++ + +A SPD K + ++G +IR+
Sbjct: 149 SPDGKGFVSVGGDTTVRIWDIYTSTPTHTLKGHTNWVLQVAWSPDSKKIATAGMEGDIRI 208
Query: 87 WDLSTLKCLRSW-KGHDGPAIGMA-----CHPSGGLLATAGADRKVLVWDVDGGFCTHYF 140
W T K L S KGH G++ +P LA++ D + +WD +
Sbjct: 209 WCPQTGKQLGSTLKGHTKFITGLSWEPFHLNPKCVRLASSSKDSTIRIWDTESCKNLMSL 268
Query: 141 KGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDG 200
GH V+ + + + L++SGS D TVRV++ + V LD H V ++A+ +D
Sbjct: 269 SGHTMSVTCLKWGGE---GLIYSGSQDRTVRVFNTTDGRLVRVLDGHAHWVNTLALNTD- 324
Query: 201 STLISAGRDKVVNLWDLRDYSCKLTVPTYEMVEA 234
L + D +D + + ++ + Y V+A
Sbjct: 325 YVLRTGSYDHTGKEYDTLEEAQRVALERYNDVKA 358
Score = 176 (67.0 bits), Expect = 5.6e-10, Sum P(2) = 5.6e-10
Identities = 65/309 (21%), Positives = 137/309 (44%)
Query: 349 LVGYNEEILDLKFLGEEEQYLAVATNIEQVQVY-DLSSMSCSYVLAGHSEIV--LCLDTC 405
L G+ +L + + + ++ +A A ++++ + L GH++ + L +
Sbjct: 178 LKGHTNWVLQVAWSPDSKK-IATAGMEGDIRIWCPQTGKQLGSTLKGHTKFITGLSWEPF 236
Query: 406 ALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHT 465
L+ + + + SKD+++R+WD+ES + +GH +V + + + + SGS D T
Sbjct: 237 HLNPKCVRLASSSKDSTIRIWDTESCKNLMSLSGHTMSVTCLKWGG--EGLIYSGSQDRT 294
Query: 466 IKVWSF-DGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLP 524
++V++ DG + V+ H +N+LA+ D ++ TGS D T +
Sbjct: 295 VRVFNTTDG-----------RLVRVLDGHAHWVNTLALN-TDYVLRTGSYDHTGKEYDTL 342
Query: 525 DLVSVVTFRGHKRGIWSVEF-SPVDQVVITASGDKTIKIWSIS-DGSCLKTFEGHTSSVL 582
+ V + V+ S +++I+ S D T+ +W+ S + + GH +
Sbjct: 343 EEAQRVALERYN----DVKAKSKGMEILISGSDDFTVIMWNPSVTKTSISRLTGHQQLIN 398
Query: 583 RASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDA 642
SF G S D +KLW ++G+ + + H ++ + + +G D+
Sbjct: 399 LVSFSPDGRYFASASFDKSIKLWDGQSGKFLGNFRGHVGAVYQVCWSSDSRYLVSGSKDS 458
Query: 643 LVNLWHDST 651
+ +W T
Sbjct: 459 TLKIWDIKT 467
Score = 176 (67.0 bits), Expect = 6.0e-10, P = 6.0e-10
Identities = 41/150 (27%), Positives = 71/150 (47%)
Query: 67 ALSPDDKLLFSSGHSREIRVWDLSTLKC-LRSWKGHDGPAIGMACHPSGGLLATAGADRK 125
A S ++L S + +W+ S K + GH ++ P G A+A D+
Sbjct: 358 AKSKGMEILISGSDDFTVIMWNPSVTKTSISRLTGHQQLINLVSFSPDGRYFASASFDKS 417
Query: 126 VLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLD 185
+ +WD G F+GH G V + + +D L SGS D+T+++WD+ KK L
Sbjct: 418 IKLWDGQSGKFLGNFRGHVGAVYQVCW--SSDSRYLVSGSKDSTLKIWDIKTKKMEKELP 475
Query: 186 KHFSRVTSMAITSDGSTLISAGRDKVVNLW 215
H V ++ + DG + S +D+++ +W
Sbjct: 476 GHADEVYTVDWSPDGDRVASGSKDRLLRIW 505
Score = 164 (62.8 bits), Expect = 3.9e-23, Sum P(2) = 3.9e-23
Identities = 54/207 (26%), Positives = 96/207 (46%)
Query: 402 LDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGS 461
++T AL++ +L TGS D++ + +D+ V V A SK ++ L+SGS
Sbjct: 316 VNTLALNTDYVLR-TGSYDHTGKEYDTLEEA-QRVALERYNDVKAK--SKGME-ILISGS 370
Query: 462 SDHTIKVWSFDGLSDDAEQPMNLKAK-AVVAAHGKDINSLAVAPNDSLVCTGSQDRTACV 520
D T+ +W+ P K + + H + IN ++ +P+ + S D++ +
Sbjct: 371 DDFTVIMWN----------PSVTKTSISRLTGHQQLINLVSFSPDGRYFASASFDKSIKL 420
Query: 521 WRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSS 580
W + FRGH ++ V +S + +++ S D T+KIW I K GH
Sbjct: 421 WDGQSGKFLGNFRGHVGAVYQVCWSSDSRYLVSGSKDSTLKIWDIKTKKMEKELPGHADE 480
Query: 581 VLRASFLTRGAQIVSCGADGLVKLWTV 607
V + G ++ S D L+++WTV
Sbjct: 481 VYTVDWSPDGDRVASGSKDRLLRIWTV 507
Score = 162 (62.1 bits), Expect = 2.0e-08, P = 2.0e-08
Identities = 81/375 (21%), Positives = 166/375 (44%)
Query: 288 EQKSSDVTISFEMDDSKRGFTAATVLPSNQGLLCVTADQ-QLLLYTTVEVPEK-KMELIL 345
++ S ++ + F+ DS+ T + S VT +Q Q+L+ + + E+ +
Sbjct: 37 QEPSLNLIVQFKNKDSENDTTGPPINISQN----VTTEQLQMLINSLLNNDEQLPYSFFV 92
Query: 346 SKRLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMS-CSYVLAGHSEIVLCLDT 404
+ + + N + L+ L +E ++ + V+ + ++ C+ ++GH+E VL
Sbjct: 93 NDQEITNNLKN-HLEGLSDET---TLSIYYQPQAVFRVRPVTRCASSMSGHTEAVL---N 145
Query: 405 CALS-SGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSD 463
CA S GK + G D +VR+WD + GH V VA+S + +G +
Sbjct: 146 CAFSPDGKGFVSVGG-DTTVRIWDIYTSTPTHTLKGHTNWVLQVAWSPDSKKIATAGM-E 203
Query: 464 HTIKVWSFDGLSDDAEQPMNLKAK-AVVAAHGKDINSLAVAP---NDSLV--CTGSQDRT 517
I++W P K + + H K I L+ P N V + S+D T
Sbjct: 204 GDIRIWC----------PQTGKQLGSTLKGHTKFITGLSWEPFHLNPKCVRLASSSKDST 253
Query: 518 ACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGH 577
+W ++++ GH + +++ + ++ + S D+T+++++ +DG ++ +GH
Sbjct: 254 IRIWDTESCKNLMSLSGHTMSVTCLKWGG-EGLIYSGSQDRTVRVFNTTDGRLVRVLDGH 312
Query: 578 TSSVLRASFLTRGAQIVSCGA-DGLVKLW-TVRTGECIATYDKHEDKIWALAVGKKTEMF 635
V + T ++ G+ D K + T+ + +A +++ D A K E+
Sbjct: 313 AHWVNTLALNTD--YVLRTGSYDHTGKEYDTLEEAQRVAL-ERYND---VKAKSKGMEIL 366
Query: 636 ATGGSDALVNLWHDS 650
+G D V +W+ S
Sbjct: 367 ISGSDDFTVIMWNPS 381
Score = 155 (59.6 bits), Expect = 3.6e-28, Sum P(2) = 3.6e-28
Identities = 49/188 (26%), Positives = 86/188 (45%)
Query: 42 INIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGH 101
+N +++N ++K+ +EG SD T L++ + +F RV ++ +C S GH
Sbjct: 92 VNDQEITN-NLKNHLEGLSDE-TTLSIYYQPQAVF--------RVRPVT--RCASSMSGH 139
Query: 102 DGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLL 161
+ A P G + G D V +WD+ TH KGH V + + PD+ K +
Sbjct: 140 TEAVLNCAFSPDGKGFVSVGGDTTVRIWDIYTSTPTHTLKGHTNWVLQVAWSPDS-KKIA 198
Query: 162 FSGSDDATVRVW-DLLAKKCVATLDKHFSRVTSMA-----ITSDGSTLISAGRDKVVNLW 215
+G + +R+W K+ +TL H +T ++ + L S+ +D + +W
Sbjct: 199 TAGME-GDIRIWCPQTGKQLGSTLKGHTKFITGLSWEPFHLNPKCVRLASSSKDSTIRIW 257
Query: 216 DLRDYSCK 223
D SCK
Sbjct: 258 DTE--SCK 263
Score = 144 (55.7 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 36/128 (28%), Positives = 63/128 (49%)
Query: 47 LSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAI 106
++ SI S + G I ++ SPD + S+ + I++WD + K L +++GH G A+
Sbjct: 382 VTKTSI-SRLTGHQQLINLVSFSPDGRYFASASFDKSIKLWDGQSGKFLGNFRGHVG-AV 439
Query: 107 GMACHPSGGLLATAGA-DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGS 165
C S +G+ D + +WD+ GH V ++ + PD D+ + SGS
Sbjct: 440 YQVCWSSDSRYLVSGSKDSTLKIWDIKTKKMEKELPGHADEVYTVDWSPDGDR--VASGS 497
Query: 166 DDATVRVW 173
D +R+W
Sbjct: 498 KDRLLRIW 505
Score = 67 (28.6 bits), Expect = 4.9e-13, Sum P(2) = 4.9e-13
Identities = 15/62 (24%), Positives = 31/62 (50%)
Query: 365 EEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVR 424
+ +YL + ++++D+ + L GH++ V +D S + +GSKD +R
Sbjct: 447 DSRYLVSGSKDSTLKIWDIKTKKMEKELPGHADEVYTVDW---SPDGDRVASGSKDRLLR 503
Query: 425 LW 426
+W
Sbjct: 504 IW 505
Score = 46 (21.3 bits), Expect = 8.7e-17, Sum P(2) = 8.7e-17
Identities = 15/64 (23%), Positives = 28/64 (43%)
Query: 217 LRDYSCKLTVPTYEMVEAVCAIPPGSAFDSFLSSYNQQTIKKKRRSLEIHFITVGERGIV 276
L S + T+ Y +AV + P + S +S + + + F++VG V
Sbjct: 105 LEGLSDETTLSIYYQPQAVFRVRPVTRCASSMSGHTEAVLNCAFSPDGKGFVSVGGDTTV 164
Query: 277 RMWN 280
R+W+
Sbjct: 165 RIWD 168
>UNIPROTKB|Q9UNX4 [details] [associations]
symbol:WDR3 "WD repeat-containing protein 3" species:9606
"Homo sapiens" [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0031965 "nuclear membrane"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 UniGene:Hs.310809
InterPro:IPR007148 Pfam:PF04003 HOGENOM:HOG000212524 KO:K14556
OMA:SIFAHDD EMBL:AF083217 IPI:IPI00009471 RefSeq:NP_006775.1
ProteinModelPortal:Q9UNX4 SMR:Q9UNX4 IntAct:Q9UNX4
MINT:MINT-1401247 STRING:Q9UNX4 PhosphoSite:Q9UNX4 DMDM:12230773
SWISS-2DPAGE:Q9UNX4 PaxDb:Q9UNX4 PeptideAtlas:Q9UNX4 PRIDE:Q9UNX4
Ensembl:ENST00000349139 GeneID:10885 KEGG:hsa:10885 UCSC:uc010oxe.1
CTD:10885 GeneCards:GC01P118472 HGNC:HGNC:12755 HPA:HPA027509
MIM:604737 neXtProt:NX_Q9UNX4 PharmGKB:PA37359 HOVERGEN:HBG013192
InParanoid:Q9UNX4 OrthoDB:EOG412M4S PhylomeDB:Q9UNX4 ChiTaRS:WDR3
GenomeRNAi:10885 NextBio:41331 ArrayExpress:Q9UNX4 Bgee:Q9UNX4
CleanEx:HS_WDR3 Genevestigator:Q9UNX4 GermOnline:ENSG00000065183
Uniprot:Q9UNX4
Length = 943
Score = 372 (136.0 bits), Expect = 6.9e-31, P = 6.9e-31
Identities = 153/658 (23%), Positives = 266/658 (40%)
Query: 25 LVVSSDGSFIACACGE-SINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSRE 83
L S DG +A + SI I L + T G IT L L S +
Sbjct: 71 LCPSPDGLHLAVGYEDGSIRIFSLLSGEGNVTFNGHKAAITTLKYDQLGGRLASGSKDTD 130
Query: 84 IRVWDLSTLKCLRSWKGHDGPAIGMACH-PSGGLLATAGADRKVLVWDVDGGFCTHYFKG 142
I VWD+ L KGH AI A LL T+G D V WD+D C G
Sbjct: 131 IIVWDVINESGLYRLKGHKD-AITQALFLREKNLLVTSGKDTMVKWWDLDTQHCFKTMVG 189
Query: 143 HKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLL------------AKKCVA-------T 183
H+ V ++ + +K L+ +G+ D+ +RVWD+ KK T
Sbjct: 190 HRTEVWGLVLLSE-EKRLI-TGASDSELRVWDIAYLQEIEDPEEPDPKKIKGSSPGIQDT 247
Query: 184 LDKHFSRVTSMAITSD-------GSTLISAGRDKVVNLWDLRDYSCKLTVPTYEMVEAVC 236
L+ + D +++ GRD+VVNL + T ++E C
Sbjct: 248 LEAEDGAFETDEAPEDRILSCRKAGSIMREGRDRVVNLAVDKTGRILACHGTDSVLELFC 307
Query: 237 AIPPGSAFDSFLSSYNQQTIKKKRRSLEIHFITVGERGIVRMWNADSACLYE-QKSSDVT 295
+ + + +KK R+ ++H + GE + N + + E Q+ +++
Sbjct: 308 ILSKKE-----IQKKMDKKMKKARKKAKLHS-SKGEEEDPEV-NVEMSLQDEIQRVTNIK 360
Query: 296 IS-----FEMDDSKRGFTAATVLPSNQGLLCVTADQQLLLYTTVEVPEKKMELILSKRLV 350
S F++ S G A L N + + + L T + P + + +
Sbjct: 361 TSAKIKSFDLIHSPHGELKAVFLLQNNLVELYSLNPSL---PTPQ-PVRTSRITIG---- 412
Query: 351 GYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSG 410
G+ ++ L F + L+ A + +++++ S++ C + E LC G
Sbjct: 413 GHRSDVRTLSFSSDNIAVLSAAA--DSIKIWNRSTLQCIRTMT--CEYALC---SFFVPG 465
Query: 411 KILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWS 470
+V G+K ++L+D S + H GA+ +++ S + F V+G +D ++K W
Sbjct: 466 DRQVVIGTKTGKLQLYDLASGNLLETIDAHDGALWSMSLSPDQRGF-VTGGADKSVKFWD 524
Query: 471 FDGLSDDAEQPMNLKAKAVVAAH-GKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSV 529
F+ + D+ L K +D+ ++ +PN L+ D T ++ + L
Sbjct: 525 FELVKDENSTQKRLSVKQTRTLQLDEDVLCVSYSPNQKLLAVSLLDCTVKIFYVDTLKFF 584
Query: 530 VTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTR 589
++ GHK + ++ S ++ T S D+ +KIW + G C K+ H SV+ F+ +
Sbjct: 585 LSLYGHKLPVICMDISHDGALIATGSADRNVKIWGLDFGDCHKSLFAHDDSVMYLQFVPK 644
Query: 590 GAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLW 647
+ G D +K W E I T + H +IW LAV + + D + LW
Sbjct: 645 SHLFFTAGKDHKIKQWDADKFEHIQTLEGHHQEIWCLAVSPSGDYVVSSSHDKSLRLW 702
Score = 203 (76.5 bits), Expect = 1.9e-12, P = 1.9e-12
Identities = 50/168 (29%), Positives = 82/168 (48%)
Query: 51 SIKST--IEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGM 108
S+K T ++ D + ++ SP+ KLL S ++++ + TLK S GH P I M
Sbjct: 539 SVKQTRTLQLDEDVL-CVSYSPNQKLLAVSLLDCTVKIFYVDTLKFFLSLYGHKLPVICM 597
Query: 109 ACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDA 168
G L+AT ADR V +W +D G C H V + F P + L F+ D
Sbjct: 598 DISHDGALIATGSADRNVKIWGLDFGDCHKSLFAHDDSVMYLQFVPKSH--LFFTAGKDH 655
Query: 169 TVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWD 216
++ WD + + TL+ H + +A++ G ++S+ DK + LW+
Sbjct: 656 KIKQWDADKFEHIQTLEGHHQEIWCLAVSPSGDYVVSSSHDKSLRLWE 703
Score = 202 (76.2 bits), Expect = 5.0e-24, Sum P(2) = 5.0e-24
Identities = 51/187 (27%), Positives = 84/187 (44%)
Query: 31 GSFIACACGESINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLS 90
G ++A E + I DL ++G +T L SPD L IR++ L
Sbjct: 36 GRYVAVPACEHVFIWDLRKGEKILILQGLKQEVTCLCPSPDGLHLAVGYEDGSIRIFSLL 95
Query: 91 TLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSI 150
+ + ++ GH + GG LA+ D ++VWDV + KGHK ++
Sbjct: 96 SGEGNVTFNGHKAAITTLKYDQLGGRLASGSKDTDIIVWDVINESGLYRLKGHKDAITQA 155
Query: 151 LFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDK 210
LF +K+LL + D V+ WDL + C T+ H + V + + S+ LI+ D
Sbjct: 156 LFL--REKNLLVTSGKDTMVKWWDLDTQHCFKTMVGHRTEVWGLVLLSEEKRLITGASDS 213
Query: 211 VVNLWDL 217
+ +WD+
Sbjct: 214 ELRVWDI 220
Score = 194 (73.4 bits), Expect = 1.8e-11, P = 1.8e-11
Identities = 42/165 (25%), Positives = 81/165 (49%)
Query: 485 KAKAVVAAHG--KDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSV 542
K + ++ G +++ L +P+ + G +D + ++ L VTF GHK I ++
Sbjct: 54 KGEKILILQGLKQEVTCLCPSPDGLHLAVGYEDGSIRIFSLLSGEGNVTFNGHKAAITTL 113
Query: 543 EFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLV 602
++ + + + S D I +W + + S L +GH ++ +A FL +V+ G D +V
Sbjct: 114 KYDQLGGRLASGSKDTDIIVWDVINESGLYRLKGHKDAITQALFLREKNLLVTSGKDTMV 173
Query: 603 KLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLW 647
K W + T C T H ++W L + + + TG SD+ + +W
Sbjct: 174 KWWDLDTQHCFKTMVGHRTEVWGLVLLSEEKRLITGASDSELRVW 218
Score = 162 (62.1 bits), Expect = 5.0e-24, Sum P(2) = 5.0e-24
Identities = 42/160 (26%), Positives = 72/160 (45%)
Query: 524 PDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLR 583
P S +T GH+ + ++ FS + V++A+ D +IKIW+ S C++T T
Sbjct: 403 PVRTSRITIGGHRSDVRTLSFSSDNIAVLSAAAD-SIKIWNRSTLQCIRTM---TCEYAL 458
Query: 584 ASFLTRGAQIVSCGAD-GLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDA 642
SF G + V G G ++L+ + +G + T D H+ +W++++ F TGG+D
Sbjct: 459 CSFFVPGDRQVVIGTKTGKLQLYDLASGNLLETIDAHDGALWSMSLSPDQRGFVTGGADK 518
Query: 643 LVNLWHDSTXXXXXXXXXXXXXXVLRGQELENAVLDADYT 682
V W R +L+ VL Y+
Sbjct: 519 SVKFWDFELVKDENSTQKRLSVKQTRTLQLDEDVLCVSYS 558
Score = 128 (50.1 bits), Expect = 0.00024, P = 0.00024
Identities = 30/128 (23%), Positives = 54/128 (42%)
Query: 63 ITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGA 122
+ + +S D L+ + R +++W L C +S HD + + P L TAG
Sbjct: 594 VICMDISHDGALIATGSADRNVKIWGLDFGDCHKSLFAHDDSVMYLQFVPKSHLFFTAGK 653
Query: 123 DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVA 182
D K+ WD D +GH + + P D + S S D ++R+W+ + +
Sbjct: 654 DHKIKQWDADKFEHIQTLEGHHQEIWCLAVSPSGD--YVVSSSHDKSLRLWERTREPLIL 711
Query: 183 TLDKHFSR 190
++ R
Sbjct: 712 EEEREMER 719
Score = 83 (34.3 bits), Expect = 8.5e-16, Sum P(2) = 8.5e-16
Identities = 19/81 (23%), Positives = 40/81 (49%)
Query: 347 KRLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCA 406
K L +++ ++ L+F+ + + + +++ +D L GH + + CL A
Sbjct: 627 KSLFAHDDSVMYLQFVPKSHLFFTAGKD-HKIKQWDADKFEHIQTLEGHHQEIWCL---A 682
Query: 407 LSSGKILIVTGSKDNSVRLWD 427
+S +V+ S D S+RLW+
Sbjct: 683 VSPSGDYVVSSSHDKSLRLWE 703
>DICTYBASE|DDB_G0288375 [details] [associations]
symbol:lis1 "lissencephaly-1 homolog protein"
species:44689 "Dictyostelium discoideum" [GO:0071539 "protein
localization to centrosome" evidence=IMP] [GO:0019933
"cAMP-mediated signaling" evidence=IGI] [GO:0051645 "Golgi
localization" evidence=IMP] [GO:0051642 "centrosome localization"
evidence=IMP] [GO:0045504 "dynein heavy chain binding"
evidence=IPI] [GO:0031592 "centrosomal corona" evidence=IDA]
[GO:0017048 "Rho GTPase binding" evidence=IPI] [GO:0015630
"microtubule cytoskeleton" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0051301 "cell division" evidence=IEA]
[GO:0030154 "cell differentiation" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0005874 "microtubule"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005819 "spindle" evidence=IEA]
[GO:0005815 "microtubule organizing center" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 dictyBase:DDB_G0288375
GO:GO:0030154 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005819 InterPro:IPR019775
GO:GO:0019933 GO:GO:0006810 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GenomeReviews:CM000154_GR GO:GO:0051642
GO:GO:0051645 EMBL:AAFI02000111 InterPro:IPR013720 Pfam:PF08513
GO:GO:0005874 HSSP:P63005 GO:GO:0031592 GO:GO:0071539 KO:K01062
OMA:WVRGLAF HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:AJ512336
EMBL:AJ512794 RefSeq:XP_636715.1 ProteinModelPortal:Q8I0F4
SMR:Q8I0F4 STRING:Q8I0F4 EnsemblProtists:DDB0219930 GeneID:8626591
KEGG:ddi:DDB_G0288375 ProtClustDB:CLSZ2429884 Uniprot:Q8I0F4
Length = 419
Score = 269 (99.8 bits), Expect = 1.2e-20, P = 1.2e-20
Identities = 64/190 (33%), Positives = 94/190 (49%)
Query: 438 TGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDI 497
TGH + +V F + +VS S D TIKVW F+ S + E+ + AV +DI
Sbjct: 103 TGHRNCINSVKFHPSF-SLMVSASEDATIKVWDFE--SGEFERTLKGHTNAV-----QDI 154
Query: 498 NSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGD 557
+ +L+ + S D T +W V T GH + V F+P +I++S D
Sbjct: 155 D---FDKTGNLLASCSADLTIKLWDFQTYDCVKTLHGHDHNVSCVRFTPSGDQLISSSRD 211
Query: 558 KTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYD 617
KTIK+W + G C+KT GH V + + G+ I SC D +K W + GEC+ATY
Sbjct: 212 KTIKVWEAATGYCIKTLVGHEDWVRKITVSEDGSCIASCSNDQTIKTWNIVKGECLATYR 271
Query: 618 KHEDKIWALA 627
+H + LA
Sbjct: 272 EHSHVVECLA 281
Score = 256 (95.2 bits), Expect = 4.0e-19, P = 4.0e-19
Identities = 94/343 (27%), Positives = 154/343 (44%)
Query: 138 HYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAIT 197
H GH+ ++S+ FHP SL+ S S+DAT++VWD + + TL H + V +
Sbjct: 100 HILTGHRNCINSVKFHPSF--SLMVSASEDATIKVWDFESGEFERTLKGHTNAVQDIDFD 157
Query: 198 SDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYEM-VEAVCAIPPGSAFDSFLSSYNQQTI 256
G+ L S D + LWD + Y C T+ ++ V V P G D +SS +TI
Sbjct: 158 KTGNLLASCSADLTIKLWDFQTYDCVKTLHGHDHNVSCVRFTPSG---DQLISSSRDKTI 214
Query: 257 KKKRRSLEIHFIT-VGERGIVRMWNA--DSACLYEQKSSDVTISFEMDDSKRGFTAATVL 313
K + T VG VR D +C+ S+D TI + + +G AT
Sbjct: 215 KVWEAATGYCIKTLVGHEDWVRKITVSEDGSCI-ASCSNDQTI--KTWNIVKGECLATYR 271
Query: 314 PSNQGLLCV---TADQQLLLYTTVEVPEKKMELILSKRLVGYNEEILDLKFLGEEEQYLA 370
+ + C+ TA+ + + + PE K ++ K+ G N +G+ YLA
Sbjct: 272 EHSHVVECLAFSTANIIDIPGSLLSTPEGKSKV---KQGPGGN-------LVGQCG-YLA 320
Query: 371 VATNIEQVQVYDLSSMSCSYVLAGHSEIVLCL--DTCALSSGKILIVTGSKDNSVRLWD- 427
+ + +++++L++ C GH V + C GK L+ G D ++R+WD
Sbjct: 321 TGSRDKTIKIWELATGRCLATYIGHDNWVRAVRFHPC----GKFLLSVGD-DKTIRVWDI 375
Query: 428 SESRCCVGVGTGHMGAVGAVAFSKKLQN-FLVSGSSDHTIKVW 469
++ RC + H + + F L N + +G D IKVW
Sbjct: 376 AQGRCIKTINEAHTHFISCLDFC--LHNPHIATGGVDDVIKVW 416
Score = 239 (89.2 bits), Expect = 3.6e-17, P = 3.6e-17
Identities = 48/162 (29%), Positives = 76/162 (46%)
Query: 487 KAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSP 546
K ++ H INS+ P+ SL+ + S+D T VW T +GH + ++F
Sbjct: 99 KHILTGHRNCINSVKFHPSFSLMVSASEDATIKVWDFESGEFERTLKGHTNAVQDIDFDK 158
Query: 547 VDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWT 606
++ + S D TIK+W C+KT GH +V F G Q++S D +K+W
Sbjct: 159 TGNLLASCSADLTIKLWDFQTYDCVKTLHGHDHNVSCVRFTPSGDQLISSSRDKTIKVWE 218
Query: 607 VRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLWH 648
TG CI T HED + + V + A+ +D + W+
Sbjct: 219 AATGYCIKTLVGHEDWVRKITVSEDGSCIASCSNDQTIKTWN 260
Score = 234 (87.4 bits), Expect = 1.2e-30, Sum P(2) = 1.2e-30
Identities = 64/243 (26%), Positives = 106/243 (43%)
Query: 53 KSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHP 112
K + G + I ++ P L+ S+ I+VWD + + R+ KGH +
Sbjct: 99 KHILTGHRNCINSVKFHPSFSLMVSASEDATIKVWDFESGEFERTLKGHTNAVQDIDFDK 158
Query: 113 SGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRV 172
+G LLA+ AD + +WD C GH VS + F P D+ L S S D T++V
Sbjct: 159 TGNLLASCSADLTIKLWDFQTYDCVKTLHGHDHNVSCVRFTPSGDQ--LISSSRDKTIKV 216
Query: 173 WDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYEMV 232
W+ C+ TL H V + ++ DGS + S D+ + W++ C T + V
Sbjct: 217 WEAATGYCIKTLVGHEDWVRKITVSEDGSCIASCSNDQTIKTWNIVKGECLATYREHSHV 276
Query: 233 EAVCAIPPGSAFD---SFLSS-YNQQTIKK-KRRSL--EIHFITVGERG-IVRMWN-ADS 283
A + D S LS+ + +K+ +L + ++ G R +++W A
Sbjct: 277 VECLAFSTANIIDIPGSLLSTPEGKSKVKQGPGGNLVGQCGYLATGSRDKTIKIWELATG 336
Query: 284 ACL 286
CL
Sbjct: 337 RCL 339
Score = 196 (74.1 bits), Expect = 3.2e-26, Sum P(2) = 3.2e-26
Identities = 41/158 (25%), Positives = 77/158 (48%)
Query: 41 SINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKG 100
+I + D + + T++G ++ + + LL S I++WD T C+++ G
Sbjct: 129 TIKVWDFESGEFERTLKGHTNAVQDIDFDKTGNLLASCSADLTIKLWDFQTYDCVKTLHG 188
Query: 101 HDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSL 160
HD + PSG L ++ D+ + VW+ G+C GH+ V I D S
Sbjct: 189 HDHNVSCVRFTPSGDQLISSSRDKTIKVWEAATGYCIKTLVGHEDWVRKITV--SEDGSC 246
Query: 161 LFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITS 198
+ S S+D T++ W+++ +C+AT +H V +A ++
Sbjct: 247 IASCSNDQTIKTWNIVKGECLATYREHSHVVECLAFST 284
Score = 190 (71.9 bits), Expect = 1.1e-11, P = 1.1e-11
Identities = 36/118 (30%), Positives = 60/118 (50%)
Query: 534 GHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQI 593
GH+ I SV+F P ++++AS D TIK+W G +T +GHT++V F G +
Sbjct: 104 GHRNCINSVKFHPSFSLMVSASEDATIKVWDFESGEFERTLKGHTNAVQDIDFDKTGNLL 163
Query: 594 VSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLWHDST 651
SC AD +KLW +T +C+ T H+ + + + + D + +W +T
Sbjct: 164 ASCSADLTIKLWDFQTYDCVKTLHGHDHNVSCVRFTPSGDQLISSSRDKTIKVWEAAT 221
Score = 181 (68.8 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 57/197 (28%), Positives = 93/197 (47%)
Query: 25 LVVSSDGSFIA-CACGESINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSRE 83
+ VS DGS IA C+ ++I ++ +T S + LA FS+ + +
Sbjct: 238 ITVSEDGSCIASCSNDQTIKTWNIVKGECLATYREHSHVVECLA--------FSTANIID 289
Query: 84 IRVWDLSTLKCLRSWK-GHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKG 142
I LST + K G G +G C G LAT D+ + +W++ G C + G
Sbjct: 290 IPGSLLSTPEGKSKVKQGPGGNLVGQ-C----GYLATGSRDKTIKIWELATGRCLATYIG 344
Query: 143 HKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDK-HFSRVTSMAITSDGS 201
H V ++ FHP K LL G DD T+RVWD+ +C+ T+++ H ++ +
Sbjct: 345 HDNWVRAVRFHP-CGKFLLSVG-DDKTIRVWDIAQGRCIKTINEAHTHFISCLDFCLHNP 402
Query: 202 TLISAGRDKVVNLWDLR 218
+ + G D V+ +W L+
Sbjct: 403 HIATGGVDDVIKVWKLQ 419
Score = 177 (67.4 bits), Expect = 1.2e-30, Sum P(2) = 1.2e-30
Identities = 32/101 (31%), Positives = 55/101 (54%)
Query: 509 VCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDG 568
+ TGS+D+T +W L + T+ GH + +V F P + +++ DKTI++W I+ G
Sbjct: 319 LATGSRDKTIKIWELATGRCLATYIGHDNWVRAVRFHPCGKFLLSVGDDKTIRVWDIAQG 378
Query: 569 SCLKTF-EGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVR 608
C+KT E HT + F I + G D ++K+W ++
Sbjct: 379 RCIKTINEAHTHFISCLDFCLHNPHIATGGVDDVIKVWKLQ 419
Score = 163 (62.4 bits), Expect = 3.4e-29, Sum P(2) = 3.4e-29
Identities = 35/96 (36%), Positives = 50/96 (52%)
Query: 553 TASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGEC 612
T S DKTIKIW ++ G CL T+ GH + V F G ++S G D +++W + G C
Sbjct: 321 TGSRDKTIKIWELATGRCLATYIGHDNWVRAVRFHPCGKFLLSVGDDKTIRVWDIAQGRC 380
Query: 613 IATYDK-HEDKIWALAVGKKTEMFATGGSDALVNLW 647
I T ++ H I L ATGG D ++ +W
Sbjct: 381 IKTINEAHTHFISCLDFCLHNPHIATGGVDDVIKVW 416
Score = 141 (54.7 bits), Expect = 2.9e-06, P = 2.9e-06
Identities = 44/198 (22%), Positives = 88/198 (44%)
Query: 29 SDGSFIACACGESINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWD 88
S I+ + ++I + + + T+ G D + + +S D + S + + I+ W+
Sbjct: 201 SGDQLISSSRDKTIKVWEAATGYCIKTLVGHEDWVRKITVSEDGSCIASCSNDQTIKTWN 260
Query: 89 LSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVS 148
+ +CL +++ H + C LA + A+ + D+ G + +G V
Sbjct: 261 IVKGECLATYREHSHV---VEC------LAFSTAN----IIDIPGSLLSTP-EGKSKVKQ 306
Query: 149 SILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGR 208
+ L +GS D T+++W+L +C+AT H + V ++ G L+S G
Sbjct: 307 GPGGNLVGQCGYLATGSRDKTIKIWELATGRCLATYIGHDNWVRAVRFHPCGKFLLSVGD 366
Query: 209 DKVVNLWDLRDYSCKLTV 226
DK + +WD+ C T+
Sbjct: 367 DKTIRVWDIAQGRCIKTI 384
Score = 140 (54.3 bits), Expect = 3.7e-06, P = 3.7e-06
Identities = 52/229 (22%), Positives = 93/229 (40%)
Query: 31 GSFIA-CACGESINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWDL 89
G+ +A C+ +I + D T+ G ++ + +P L SS + I+VW+
Sbjct: 160 GNLLASCSADLTIKLWDFQTYDCVKTLHGHDHNVSCVRFTPSGDQLISSSRDKTIKVWEA 219
Query: 90 STLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSS 149
+T C+++ GH+ + G +A+ D+ + W++ G C ++ H VV
Sbjct: 220 ATGYCIKTLVGHEDWVRKITVSEDGSCIASCSNDQTIKTWNIVKGECLATYREHSHVVEC 279
Query: 150 ILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRD 209
+ F T + GS +T K V + + L + RD
Sbjct: 280 LAF--STANIIDIPGSLLSTPE-----GKSKV-------KQGPGGNLVGQCGYLATGSRD 325
Query: 210 KVVNLWDLRDYSCKLTVPTYE-MVEAVCAIPPGSAFDSFLSSYNQQTIK 257
K + +W+L C T ++ V AV P G F LS + +TI+
Sbjct: 326 KTIKIWELATGRCLATYIGHDNWVRAVRFHPCGK-F--LLSVGDDKTIR 371
Score = 126 (49.4 bits), Expect = 0.00013, P = 0.00013
Identities = 44/165 (26%), Positives = 68/165 (41%)
Query: 489 VVAAHGKDINSLAV--APNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSP 546
V HG D N V P+ + + S+D+T VW + T GH+ + + S
Sbjct: 183 VKTLHGHDHNVSCVRFTPSGDQLISSSRDKTIKVWEAATGYCIKTLVGHEDWVRKITVSE 242
Query: 547 VDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWT 606
+ + S D+TIK W+I G CL T+ H+ V +F T A I+ L +
Sbjct: 243 DGSCIASCSNDQTIKTWNIVKGECLATYREHSHVVECLAFST--ANIIDIPGS----LLS 296
Query: 607 VRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLWHDST 651
G+ K + VG+ ATG D + +W +T
Sbjct: 297 TPEGK-----SKVKQGPGGNLVGQ-CGYLATGSRDKTIKIWELAT 335
Score = 119 (46.9 bits), Expect = 5.4e-18, Sum P(2) = 5.4e-18
Identities = 32/124 (25%), Positives = 60/124 (48%)
Query: 347 KRLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCA 406
+ L G+ + D+ F + LA + ++++D + C L GH V C+
Sbjct: 142 RTLKGHTNAVQDIDF-DKTGNLLASCSADLTIKLWDFQTYDCVKTLHGHDHNVSCVRFTP 200
Query: 407 LSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTI 466
SG LI + S+D ++++W++ + C+ GH V + S+ + + S S+D TI
Sbjct: 201 --SGDQLI-SSSRDKTIKVWEAATGYCIKTLVGHEDWVRKITVSED-GSCIASCSNDQTI 256
Query: 467 KVWS 470
K W+
Sbjct: 257 KTWN 260
Score = 113 (44.8 bits), Expect = 5.7e-24, Sum P(2) = 5.7e-24
Identities = 33/110 (30%), Positives = 51/110 (46%)
Query: 414 IVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDG 473
+ TGS+D ++++W+ + C+ GH V AV F FL+S D TI+VW
Sbjct: 319 LATGSRDKTIKIWELATGRCLATYIGHDNWVRAVRFHP-CGKFLLSVGDDKTIRVW---- 373
Query: 474 LSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRL 523
D Q +K + AH I+ L ++ + TG D VW+L
Sbjct: 374 ---DIAQGRCIKT--INEAHTHFISCLDFCLHNPHIATGGVDDVIKVWKL 418
>POMBASE|SPBC3D6.12 [details] [associations]
symbol:dip2 "U3 snoRNA associated protein Dip2
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0005634
"nucleus" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0030490 "maturation of SSU-rRNA" evidence=ISO] [GO:0030515
"snoRNA binding" evidence=ISO] [GO:0032040 "small-subunit
processome" evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPBC3D6.12 GO:GO:0005829 GO:GO:0005634
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329671 GO:GO:0030515 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0032040 GO:GO:0030490
InterPro:IPR007148 Pfam:PF04003 HOGENOM:HOG000212524 KO:K14556
OMA:SIFAHDD OrthoDB:EOG4N07P3 PIR:T40372 RefSeq:NP_595524.1
ProteinModelPortal:P87177 STRING:P87177 EnsemblFungi:SPBC3D6.12.1
GeneID:2540971 KEGG:spo:SPBC3D6.12 NextBio:20802086 Uniprot:P87177
Length = 922
Score = 307 (113.1 bits), Expect = 1.7e-30, Sum P(2) = 1.7e-30
Identities = 116/517 (22%), Positives = 218/517 (42%)
Query: 159 SLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLR 218
S L S D+ +++WDL + CV T H + +M ++ D ++AG V +W++
Sbjct: 186 SFLLSVGKDSFMKLWDLSIQHCVETHVDHQGEIWAMCVSPDAKRCLTAGTGSDVKVWEIS 245
Query: 219 DYSCKLTVPTYEMVEAVCAIPPGSAFDSFLSSY---NQQTIKKKR-RSLEIHFITVGERG 274
PT + + + S +Y N+ + + R LE+ F
Sbjct: 246 FPDDNNFTPTTKAFQQLGTFTRQSRDRPITLAYDVSNRYVVFQAHDRLLEV-FRLRSSAE 304
Query: 275 IVRMWNADSACLYEQKSSDVTISFEMDDSKRGFT-------AATV--LPSNQGLLCVTAD 325
+ ++ N +KS DV+I+ + D F A++V +P N+ VT+
Sbjct: 305 LEKILNRRRR---RKKSEDVSITLK--DEYEPFALIRTTARASSVAWIPGNRTPTLVTSL 359
Query: 326 QQ--LLLYTTVEVPEKKMELILSKR--------LVGYNEEILDLKFLGEEEQYLAVATNI 375
Q + +Y ++V + L++R + G+ ++ L + L+ A
Sbjct: 360 QNNSIEVYA-LDVKSEGSAAPLTERASRISAIEIPGHRADVRTLALSANHDVILSGANG- 417
Query: 376 EQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVG 435
+++++ + SC + E L +++ K IV+ K + ++D S +
Sbjct: 418 -SLKLWNKKTTSCIRTI----ECGYVLAASFINNDKC-IVSAYKSGELEVYDIASSSLIE 471
Query: 436 VGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWS----FDGLSDDAEQPMNLKAKAVVA 491
H GA+ +A + + S+DHT+K+WS FD + + LK +
Sbjct: 472 RIQAHDGAIWDLAVGHD-GTYFATASADHTVKLWSLKSSFDFVPGTTRKVTTLKLEQTRQ 530
Query: 492 AH-GKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQV 550
D+ ++ ++P+ V D T V+ L L + GHK + S++ S ++
Sbjct: 531 IDFTDDVLAVKISPDGRFVAASLLDNTVKVYYLDSLKFFLNLYGHKLPVLSMDISYDSKL 590
Query: 551 VITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTG 610
++T S DK +KIW + G C K+ H S++ +F +C D V+ W ++
Sbjct: 591 LVTCSADKNVKIWGLDFGDCHKSIFAHQDSIMEVTFQPDTYNFFTCSKDREVRYWDGKSF 650
Query: 611 ECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLW 647
+ I H ++WALAVG +G D + LW
Sbjct: 651 DLILKLRGHHSEVWALAVGPT--FVVSGSHDHSIRLW 685
Score = 196 (74.1 bits), Expect = 1.1e-11, P = 1.1e-11
Identities = 48/161 (29%), Positives = 77/161 (47%)
Query: 60 SDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLAT 119
+D + A+ +SPD + + +S ++V+ L +LK + GH P + M LL T
Sbjct: 534 TDDVLAVKISPDGRFVAASLLDNTVKVYYLDSLKFFLNLYGHKLPVLSMDISYDSKLLVT 593
Query: 120 AGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKK 179
AD+ V +W +D G C H+ + + F PDT F+ S D VR WD +
Sbjct: 594 CSADKNVKIWGLDFGDCHKSIFAHQDSIMEVTFQPDTYN--FFTCSKDREVRYWDGKSFD 651
Query: 180 CVATLDKHFSRVTSMAITSDGSTLISAG-RDKVVNLWDLRD 219
+ L H S V ++A+ G T + +G D + LW+ D
Sbjct: 652 LILKLRGHHSEVWALAV---GPTFVVSGSHDHSIRLWEQGD 689
Score = 143 (55.4 bits), Expect = 5.6e-06, P = 5.6e-06
Identities = 56/217 (25%), Positives = 90/217 (41%)
Query: 25 LVVSSDGSFIACACGESINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREI 84
L +S++ I S+ + + S TIE G + A + +DK + S+ S E+
Sbjct: 402 LALSANHDVILSGANGSLKLWNKKTTSCIRTIECGY--VLAASFINNDKCIVSAYKSGEL 459
Query: 85 RVWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHK 144
V+D+++ + + HDG +A G ATA AD V +W + F + G
Sbjct: 460 EVYDIASSSLIERIQAHDGAIWDLAVGHDGTYFATASADHTVKLWSLKSSF--DFVPGTT 517
Query: 145 GVVSSILFHPD-----TDKSLLFSGSDDA----------TVRVWDLLAKKCVATLDKHFS 189
V+++ TD L S D TV+V+ L + K L H
Sbjct: 518 RKVTTLKLEQTRQIDFTDDVLAVKISPDGRFVAASLLDNTVKVYYLDSLKFFLNLYGHKL 577
Query: 190 RVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTV 226
V SM I+ D L++ DK V +W L C ++
Sbjct: 578 PVLSMDISYDSKLLVTCSADKNVKIWGLDFGDCHKSI 614
Score = 134 (52.2 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 112/534 (20%), Positives = 204/534 (38%)
Query: 113 SGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLF-SGSDDATVR 171
S L + G D + +WD+ C H+G + ++ PD + L +GSD V+
Sbjct: 184 SDSFLLSVGKDSFMKLWDLSIQHCVETHVDHQGEIWAMCVSPDAKRCLTAGTGSD---VK 240
Query: 172 VWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTV-PTYE 230
VW++ D +F+ T A G T RD+ + L D S + V ++
Sbjct: 241 VWEISFPD-----DNNFTPTTK-AFQQLG-TFTRQSRDRPITL--AYDVSNRYVVFQAHD 291
Query: 231 MVEAVCAIPPGSAFDSFLSSYNQQTIKKKRRSLEIHF---------ITVGERGIVRMW-- 279
+ V + + + L N++ +KK + I I R W
Sbjct: 292 RLLEVFRLRSSAELEKIL---NRRRRRKKSEDVSITLKDEYEPFALIRTTARASSVAWIP 348
Query: 280 -NADSACLYEQKSSDVTISFEMDDSKRGFTA----------ATVLPSNQG---LLCVTAD 325
N + +++ + + + +D G A A +P ++ L ++A+
Sbjct: 349 GNRTPTLVTSLQNNSIEV-YALDVKSEGSAAPLTERASRISAIEIPGHRADVRTLALSAN 407
Query: 326 QQLLLYT---TVEVPEKKMELILSKRLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYD 382
++L ++++ KK + GY +L F+ ++ ++ A +++VYD
Sbjct: 408 HDVILSGANGSLKLWNKKTTSCIRTIECGY---VLAASFINNDKCIVS-AYKSGELEVYD 463
Query: 383 LSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMG 442
++S S + H + L A+ T S D++V+LW +S GT
Sbjct: 464 IASSSLIERIQAHDGAIWDL---AVGHDGTYFATASADHTVKLWSLKSSFDFVPGTTRK- 519
Query: 443 AVGAVAFSKKLQNFLVSGSSDH-TIKVWSFDG------LSDDAEQPM---NLKAKAVVAA 492
V K Q + + D +K+ S DG L D+ + +LK +
Sbjct: 520 ----VTTLKLEQTRQIDFTDDVLAVKI-SPDGRFVAASLLDNTVKVYYLDSLKFFLNLYG 574
Query: 493 HGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVI 552
H + S+ ++ + L+ T S D+ +W L + H+ I V F P
Sbjct: 575 HKLPVLSMDISYDSKLLVTCSADKNVKIWGLDFGDCHKSIFAHQDSIMEVTFQPDTYNFF 634
Query: 553 TASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGA-DGLVKLW 605
T S D+ ++ W + GH S V L G V G+ D ++LW
Sbjct: 635 TCSKDREVRYWDGKSFDLILKLRGHHSEVWA---LAVGPTFVVSGSHDHSIRLW 685
Score = 129 (50.5 bits), Expect = 0.00018, P = 0.00018
Identities = 34/149 (22%), Positives = 64/149 (42%)
Query: 27 VSSDGSFIACAC-GESINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIR 85
+S DG F+A + ++ + L + + G + ++ +S D KLL + + ++
Sbjct: 542 ISPDGRFVAASLLDNTVKVYYLDSLKFFLNLYGHKLPVLSMDISYDSKLLVTCSADKNVK 601
Query: 86 VWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKG 145
+W L C +S H + + P T DR+V WD +GH
Sbjct: 602 IWGLDFGDCHKSIFAHQDSIMEVTFQPDTYNFFTCSKDREVRYWDGKSFDLILKLRGHHS 661
Query: 146 VVSSILFHPDTDKSLLFSGSDDATVRVWD 174
V ++ P + + SGS D ++R+W+
Sbjct: 662 EVWALAVGP----TFVVSGSHDHSIRLWE 686
Score = 114 (45.2 bits), Expect = 1.8e-09, Sum P(2) = 1.8e-09
Identities = 72/305 (23%), Positives = 125/305 (40%)
Query: 345 LSKRLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCL-- 402
L +R+ ++ I DL +G + Y A A+ V+++ L S S +V G + V L
Sbjct: 469 LIERIQAHDGAIWDLA-VGHDGTYFATASADHTVKLWSLKS-SFDFV-PGTTRKVTTLKL 525
Query: 403 ----------DTCA--LSSGKILIVTGSKDNSVRLWDSES-RCCVGVGTGHMGAVGA--V 447
D A +S + DN+V+++ +S + + + GH V + +
Sbjct: 526 EQTRQIDFTDDVLAVKISPDGRFVAASLLDNTVKVYYLDSLKFFLNL-YGHKLPVLSMDI 584
Query: 448 AFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDS 507
++ KL LV+ S+D +K+W D D + + AH I + P+
Sbjct: 585 SYDSKL---LVTCSADKNVKIWGLD--FGDCHKS--------IFAHQDSIMEVTFQPDTY 631
Query: 508 LVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISD 567
T S+DR W ++ RGH +W++ P V++ S D +I++W
Sbjct: 632 NFFTCSKDREVRYWDGKSFDLILKLRGHHSEVWALAVGPT--FVVSGSHDHSIRLWE--Q 687
Query: 568 GSCLKTFEGHTSSVLRASF-LTRGAQIVSCGADGLVKLWTVR--TGECIATYDKHEDKIW 624
G L E L + T + + ADG VK V T + I + E +
Sbjct: 688 GDDLVFLEEERERELEEQYESTLVSSYENAEADGEVKDGDVAAVTKQTIESLKDGEKILE 747
Query: 625 ALAVG 629
A+ +G
Sbjct: 748 AITIG 752
Score = 113 (44.8 bits), Expect = 1.7e-30, Sum P(2) = 1.7e-30
Identities = 35/117 (29%), Positives = 54/117 (46%)
Query: 79 GHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAG-ADRKVLVWDVDGGFCT 137
G + WDL T + L WK D A + C + + G AD + +W DG
Sbjct: 41 GGLESVLEWDLKTGQLLSKWKDSDCSA-KVTCIANFDEMYAVGYADGSIRLWK-DGELLI 98
Query: 138 HYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSM 194
GHK V+++ F D + L SGS D + VWD++A+ + L H ++T +
Sbjct: 99 T-LNGHKSAVTTMDF--DKMGTRLASGSMDTDIIVWDIVAETGLFRLRGHKDQITKL 152
Score = 91 (37.1 bits), Expect = 3.4e-07, Sum P(2) = 3.4e-07
Identities = 19/60 (31%), Positives = 26/60 (43%)
Query: 72 DKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDV 131
D L S G +++WDLS C+ + H G M P TAG V VW++
Sbjct: 185 DSFLLSVGKDSFMKLWDLSIQHCVETHVDHQGEIWAMCVSPDAKRCLTAGTGSDVKVWEI 244
Score = 90 (36.7 bits), Expect = 4.3e-07, Sum P(2) = 4.3e-07
Identities = 41/202 (20%), Positives = 86/202 (42%)
Query: 118 ATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLA 177
A G VL WD+ G +K + + + D+ + G D ++R+W
Sbjct: 38 AIVGGLESVLEWDLKTGQLLSKWKD-SDCSAKVTCIANFDE-MYAVGYADGSIRLWK--D 93
Query: 178 KKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYS--CKLTVPTYEMVEAV 235
+ + TL+ H S VT+M G+ L S D + +WD+ + +L ++ + +
Sbjct: 94 GELLITLNGHKSAVTTMDFDKMGTRLASGSMDTDIIVWDIVAETGLFRLRGHKDQITKLL 153
Query: 236 CAIPPG--SAFDSFLSS-YNQQTIKKKRRSLEIHFITVGERGIVRMWNAD-SACL--YEQ 289
PP +A ++ + + + + +S + ++VG+ +++W+ C+ +
Sbjct: 154 FITPPSKNTAEETVVDTDIDSGDMDVDSKSSDSFLLSVGKDSFMKLWDLSIQHCVETHVD 213
Query: 290 KSSDVTISFEMDDSKRGFTAAT 311
++ D+KR TA T
Sbjct: 214 HQGEIWAMCVSPDAKRCLTAGT 235
Score = 84 (34.6 bits), Expect = 1.9e-27, Sum P(2) = 1.9e-27
Identities = 27/114 (23%), Positives = 49/114 (42%)
Query: 40 ESINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSR-EIRVWDLSTLKCLRSW 98
ES+ DL + S + + ++ D++ ++ G++ IR+W L L +
Sbjct: 44 ESVLEWDLKTGQLLSKWKDSDCSAKVTCIANFDEM-YAVGYADGSIRLWKDGEL--LITL 100
Query: 99 KGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILF 152
GH M G LA+ D ++VWD+ +GHK ++ +LF
Sbjct: 101 NGHKSAVTTMDFDKMGTRLASGSMDTDIIVWDIVAETGLFRLRGHKDQITKLLF 154
Score = 72 (30.4 bits), Expect = 3.0e-05, Sum P(2) = 3.0e-05
Identities = 23/89 (25%), Positives = 39/89 (43%)
Query: 5 PLKKSYGCEPVLQQFYGGGPLVV---SSDGSFIACACGESINIVDLSNASIKSTIEGGSD 61
P K+ E V+ G + V SSD ++ + + DLS T
Sbjct: 157 PPSKNTAEETVVDTDIDSGDMDVDSKSSDSFLLSVGKDSFMKLWDLSIQHCVETHVDHQG 216
Query: 62 TITALALSPDDKLLFSSGHSREIRVWDLS 90
I A+ +SPD K ++G +++VW++S
Sbjct: 217 EIWAMCVSPDAKRCLTAGTGSDVKVWEIS 245
>TAIR|locus:2089855 [details] [associations]
symbol:AT3G21540 "AT3G21540" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0001510 "RNA methylation" evidence=RCA]
[GO:0006406 "mRNA export from nucleus" evidence=RCA] [GO:0006606
"protein import into nucleus" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002686 GO:GO:0005730
EMBL:AB019232 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649
InterPro:IPR007148 Pfam:PF04003 HOGENOM:HOG000212524 KO:K14556
OMA:SIFAHDD IPI:IPI00523426 RefSeq:NP_188791.3 UniGene:At.28071
ProteinModelPortal:Q9LVF2 SMR:Q9LVF2 STRING:Q9LVF2 PRIDE:Q9LVF2
EnsemblPlants:AT3G21540.1 GeneID:821708 KEGG:ath:AT3G21540
TAIR:At3g21540 InParanoid:Q9LVF2 PhylomeDB:Q9LVF2
ProtClustDB:CLSN2680855 ArrayExpress:Q9LVF2 Genevestigator:Q9LVF2
Uniprot:Q9LVF2
Length = 955
Score = 367 (134.2 bits), Expect = 2.5e-30, P = 2.5e-30
Identities = 144/678 (21%), Positives = 270/678 (39%)
Query: 26 VVSSDGSFIACACGE-SINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREI 84
+ SS S +A + SI I D + + +TAL + +L S +I
Sbjct: 71 IASSASSLVAVGYADGSIRIWDTEKGTCEVNFNSHKGAVTALRYNKVGSMLASGSKDNDI 130
Query: 85 RVWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHK 144
+WD+ L +GH + G L ++ D+ + VWD++ C GH
Sbjct: 131 ILWDVVGESGLFRLRGHRDQVTDLVFLDGGKKLVSSSKDKFLRVWDLETQHCMQIVSGHH 190
Query: 145 GVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLI 204
V S+ D ++ + +GS D +R + + K +S S+ S+ + +
Sbjct: 191 SEVWSV--DTDPEERYVVTGSADQELRFYAV----------KEYSSNGSLVSDSNANEIK 238
Query: 205 SAGRDKVVNLWDLRDYSCKLTVPTYEMVEAV----------CAIPPGSAFDSFL---SSY 251
++ N W++ ++ T + V V C + G + F +
Sbjct: 239 ASEEHSTENKWEILKLFGEIQRQTKDRVARVRFNVSGKLLACQMA-GKTIEIFRVLDEAE 297
Query: 252 NQQTIKKKRRSLEIHFITVGERGIVRMWNADSAC-LYEQKSSDVTIS-FEMDDSKRG--- 306
+Q K++ R E VG+ A + L + SS + F++ R
Sbjct: 298 AKQKAKRRLRRKEKKSSKVGDENSTANGEASAKIELADAVSSPTVLDVFKLLQVIRAGRK 357
Query: 307 ---FTAATVLPSNQ-GLLCVTADQQLLLYTTVEVPEKKMELILSKRLVGYNEEILDLKFL 362
F+ P G L ++ + L + +++ E + + + G+ ++ +
Sbjct: 358 ISSFSFCPTAPKESLGTLALSLNNNSLEFYSLKSSENAKTVTIEHQ--GHRSDVRSVTL- 414
Query: 363 GEEEQYLAVATNIEQVQVYDLSSMSCSYVL-AGHSEIVLCLDTCALSSGKILIVTGSKDN 421
E+ L ++T+ +V++++ S+ SC + +G+ LC + + K IV G+K
Sbjct: 415 -SEDNTLLMSTSHSEVKIWNPSTGSCLRTIDSGYG---LC--SLIVPQNKYGIV-GTKSG 467
Query: 422 SVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQP 481
+ + D S V H G + ++ F V+ S+DH +K W + +
Sbjct: 468 VLEIIDIGSATKVEEVKAHGGTIWSITPIPNDSGF-VTVSADHEVKFWEYQVKQKSGKAT 526
Query: 482 MNLKAKAVVAAH-GKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIW 540
L V + D+ ++A++P+ + D T V+ + L ++ GHK +
Sbjct: 527 KKLTVSNVKSMKMNDDVLAVAISPDAKHIAVALLDSTVKVFYMDSLKFYLSLYGHKLPVM 586
Query: 541 SVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADG 600
++ S ++++T S DK +KIW + G C K+ H SV+ F+ + S G D
Sbjct: 587 CIDISSDGELIVTGSQDKNLKIWGLDFGDCHKSIFAHGDSVMGVKFVRNTHYLFSIGKDR 646
Query: 601 LVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLWHDSTXXXXXXXXX 660
LVK W E + T + H +IW LA+ + + TG D + W S
Sbjct: 647 LVKYWDADKFEHLLTLEGHHAEIWCLAISNRGDFLVTGSHDRSMRRWDRSEEPFFLEEEK 706
Query: 661 XXXXXVLRGQELENAVLD 678
L E++NA D
Sbjct: 707 EKRLEELFESEIDNAADD 724
Score = 190 (71.9 bits), Expect = 4.9e-11, P = 4.9e-11
Identities = 51/204 (25%), Positives = 94/204 (46%)
Query: 25 LVVSSDGSFIACACGESINIVDLSNASIKSTI-----EGG-SDTITALALSPDDKLLFSS 78
+ S G ++ E + I + T+ GG S +T++A S L +
Sbjct: 24 IAYDSTGKYVLAPALEKVGIWHVRQGVCSKTLTPSSSRGGPSLAVTSIASSASS--LVAV 81
Query: 79 GHSR-EIRVWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCT 137
G++ IR+WD C ++ H G + + G +LA+ D +++WDV G
Sbjct: 82 GYADGSIRIWDTEKGTCEVNFNSHKGAVTALRYNKVGSMLASGSKDNDIILWDVVGESGL 141
Query: 138 HYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAIT 197
+GH+ V+ ++F D K L+ S S D +RVWDL + C+ + H S V S+
Sbjct: 142 FRLRGHRDQVTDLVFL-DGGKKLV-SSSKDKFLRVWDLETQHCMQIVSGHHSEVWSVDTD 199
Query: 198 SDGSTLISAGRDKVVNLWDLRDYS 221
+ +++ D+ + + +++YS
Sbjct: 200 PEERYVVTGSADQELRFYAVKEYS 223
Score = 186 (70.5 bits), Expect = 1.3e-10, P = 1.3e-10
Identities = 54/202 (26%), Positives = 92/202 (45%)
Query: 371 VATNIEQVQVYDLSSMSCSYVLAGHSEI---VLCLDTCALSSGKILIVTGSKDNSVRLWD 427
+A +E+V ++ + CS L S L + + A SS L+ G D S+R+WD
Sbjct: 34 LAPALEKVGIWHVRQGVCSKTLTPSSSRGGPSLAVTSIA-SSASSLVAVGYADGSIRIWD 92
Query: 428 SESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAK 487
+E C H GAV A+ ++K + + L SGS D+ I +W G S L+
Sbjct: 93 TEKGTCEVNFNSHKGAVTALRYNK-VGSMLASGSKDNDIILWDVVGESG----LFRLRG- 146
Query: 488 AVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPV 547
H + L + + S+D+ VW L + GH +WSV+ P
Sbjct: 147 -----HRDQVTDLVFLDGGKKLVSSSKDKFLRVWDLETQHCMQIVSGHHSEVWSVDTDPE 201
Query: 548 DQVVITASGDKTIKIWSISDGS 569
++ V+T S D+ ++ +++ + S
Sbjct: 202 ERYVVTGSADQELRFYAVKEYS 223
Score = 147 (56.8 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 59/270 (21%), Positives = 113/270 (41%)
Query: 12 CEPVLQQFYGGGPLVVSSDGSFIACACGESINIVDLSNASIKSTIEGGSDTITALALSPD 71
C + YG L+V + I + I+D+ +A+ ++ TI ++ P+
Sbjct: 439 CLRTIDSGYGLCSLIVPQNKYGIVGTKSGVLEIIDIGSATKVEEVKAHGGTIWSITPIPN 498
Query: 72 DKLLFSSGHSREIRVWDLS------------TLKCLRSWKGHDGPAIGMACHPSGGLLAT 119
D + E++ W+ T+ ++S K +D + +A P +A
Sbjct: 499 DSGFVTVSADHEVKFWEYQVKQKSGKATKKLTVSNVKSMKMNDD-VLAVAISPDAKHIAV 557
Query: 120 AGADRKVLVWDVDG-GFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAK 178
A D V V+ +D F + GHK V I +D L+ +GS D +++W L
Sbjct: 558 ALLDSTVKVFYMDSLKFYLSLY-GHKLPVMCIDI--SSDGELIVTGSQDKNLKIWGLDFG 614
Query: 179 KCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYEMVEAVCAI 238
C ++ H V + + L S G+D++V WD + LT+ + E C +
Sbjct: 615 DCHKSIFAHGDSVMGVKFVRNTHYLFSIGKDRLVKYWDADKFEHLLTLEGHH-AEIWC-L 672
Query: 239 PPGSAFDSFLSSYNQQTIKKKRRSLEIHFI 268
+ D ++ + +++++ RS E F+
Sbjct: 673 AISNRGDFLVTGSHDRSMRRWDRSEEPFFL 702
Score = 127 (49.8 bits), Expect = 0.00031, P = 0.00031
Identities = 29/112 (25%), Positives = 53/112 (47%)
Query: 541 SVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTS----SVLRASFLTRGAQIVSC 596
++ + + V+ + +K + IW + G C KT +S S+ S + + +V+
Sbjct: 23 NIAYDSTGKYVLAPALEK-VGIWHVRQGVCSKTLTPSSSRGGPSLAVTSIASSASSLVAV 81
Query: 597 G-ADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLW 647
G ADG +++W G C ++ H+ + AL K M A+G D + LW
Sbjct: 82 GYADGSIRIWDTEKGTCEVNFNSHKGAVTALRYNKVGSMLASGSKDNDIILW 133
>UNIPROTKB|E1BM03 [details] [associations]
symbol:WDR3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0031965 "nuclear membrane" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0031965 InterPro:IPR020472
PRINTS:PR00320 InterPro:IPR007148 Pfam:PF04003
GeneTree:ENSGT00550000074925 KO:K14556 OMA:SIFAHDD CTD:10885
EMBL:DAAA02007388 IPI:IPI00694068 RefSeq:NP_001179317.1
UniGene:Bt.25958 ProteinModelPortal:E1BM03 PRIDE:E1BM03
Ensembl:ENSBTAT00000026561 GeneID:514870 KEGG:bta:514870
NextBio:20871548 Uniprot:E1BM03
Length = 943
Score = 365 (133.5 bits), Expect = 4.1e-30, P = 4.1e-30
Identities = 149/656 (22%), Positives = 262/656 (39%)
Query: 25 LVVSSDGSFIACACGE-SINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSRE 83
L S DG +A + SI I L + T G IT+L L S +
Sbjct: 71 LCPSPDGLHLAVGYEDGSIRIFSLLSGEGNVTFNGHKAAITSLKYDQLGGRLASGSKDTD 130
Query: 84 IRVWDLSTLKCLRSWKGHDGPAIGMACH-PSGGLLATAGADRKVLVWDVDGGFCTHYFKG 142
I VWD+ L KGH AI A LL T+G D V WD+D C G
Sbjct: 131 IIVWDVINESGLYRLKGHKD-AITQALFLREKNLLVTSGKDTMVKWWDLDTQHCFKTMVG 189
Query: 143 HKGVVSSILFHPDTDKSLLFSGSDDATVRVWDL----------------LAKKCVATLDK 186
H+ V ++ + +K L+ +G+ D+ +R WD+ + + D
Sbjct: 190 HRTEVWGLVLVSE-EKRLI-TGASDSELRAWDISYLQEIEDPEEPEPKKIKESSPGIQDS 247
Query: 187 HFSR--VTSMAITSD--------GSTLISAGRDKVVNLWDLRDYSCKLTVPTYEMVEAVC 236
H + M T + +++ GRD+VVNL + T ++E C
Sbjct: 248 HEAEDGTLEMDETPEDRILTCRKAGSIMREGRDRVVNLAVDKTGRILACHGTDSVLEVFC 307
Query: 237 AIPPGSAFDSFLSSYNQQTIKKKRRSLEIHFITVGERGI---VRMWNADSACLYEQ-KSS 292
+ + + +KK ++ +++ E + V+M D K+S
Sbjct: 308 ILSKEE-----IQKKMDKKMKKAKKKAKLNSCNEEEEDLEVNVKMTLQDEIQRVANIKTS 362
Query: 293 DVTISFEMDDSKRGFTAATVLPSNQGLLCVTADQQLLLYTTVEVPEKKMELILSKRLVGY 352
SF++ + +G A L N + L T P + + + G+
Sbjct: 363 AKIKSFDLIHTPQGELKAVFLLQNN----LVELYSLNASTPGPQPVRTNRITIG----GH 414
Query: 353 NEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKI 412
++ L F + L+ A + +++++ S++ C +A E LC G
Sbjct: 415 RSDVRTLSFSSDNIAILSAAA--DSIKIWNRSTLQCIRTMA--CEYALC---SFFVPGDR 467
Query: 413 LIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFD 472
+V G+K ++L+D S + H GA+ +++ S + F V+G +D ++K W F+
Sbjct: 468 QVVIGTKTGKLQLYDLASGNLLETIDAHDGALWSLSLSPDQRGF-VTGGADKSVKFWDFE 526
Query: 473 GLSDDAEQPMNLKAKAVVAAH-GKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVT 531
+ D+ L K +++ ++ +PN L+ D T ++ + L ++
Sbjct: 527 LVKDENSTQKRLSVKQTRTLQLDEEVLCVSYSPNQKLLAVSLLDCTVKIFYVDTLKFFLS 586
Query: 532 FRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGA 591
GHK + ++ S ++ T S D+ +KIW + G C K+ H SV+ F+ +
Sbjct: 587 LYGHKLPVICMDISYDGALIATGSADRNVKIWGLDFGDCHKSLFAHDDSVMYLRFVPKSH 646
Query: 592 QIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLW 647
+ G D +K W E I T + H +IW LAV + + D + LW
Sbjct: 647 LFFTAGKDRKIKQWDADKFEHIQTLEGHHQEIWCLAVSPSGDYVVSSSHDKSLRLW 702
Score = 202 (76.2 bits), Expect = 1.7e-23, Sum P(2) = 1.7e-23
Identities = 51/187 (27%), Positives = 83/187 (44%)
Query: 31 GSFIACACGESINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLS 90
G ++A E + I DL ++G +T L SPD L IR++ L
Sbjct: 36 GRYVAVPACEHVFIWDLRKGEKILILQGLKHEVTCLCPSPDGLHLAVGYEDGSIRIFSLL 95
Query: 91 TLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSI 150
+ + ++ GH + GG LA+ D ++VWDV + KGHK ++
Sbjct: 96 SGEGNVTFNGHKAAITSLKYDQLGGRLASGSKDTDIIVWDVINESGLYRLKGHKDAITQA 155
Query: 151 LFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDK 210
LF +K+LL + D V+ WDL + C T+ H + V + + S+ LI+ D
Sbjct: 156 LFL--REKNLLVTSGKDTMVKWWDLDTQHCFKTMVGHRTEVWGLVLVSEEKRLITGASDS 213
Query: 211 VVNLWDL 217
+ WD+
Sbjct: 214 ELRAWDI 220
Score = 202 (76.2 bits), Expect = 2.4e-12, P = 2.4e-12
Identities = 46/156 (29%), Positives = 76/156 (48%)
Query: 61 DTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATA 120
+ + ++ SP+ KLL S ++++ + TLK S GH P I M G L+AT
Sbjct: 550 EEVLCVSYSPNQKLLAVSLLDCTVKIFYVDTLKFFLSLYGHKLPVICMDISYDGALIATG 609
Query: 121 GADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKC 180
ADR V +W +D G C H V + F P + L F+ D ++ WD +
Sbjct: 610 SADRNVKIWGLDFGDCHKSLFAHDDSVMYLRFVPKSH--LFFTAGKDRKIKQWDADKFEH 667
Query: 181 VATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWD 216
+ TL+ H + +A++ G ++S+ DK + LW+
Sbjct: 668 IQTLEGHHQEIWCLAVSPSGDYVVSSSHDKSLRLWE 703
Score = 194 (73.4 bits), Expect = 1.8e-11, P = 1.8e-11
Identities = 43/165 (26%), Positives = 79/165 (47%)
Query: 485 KAKAVVAAHG--KDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSV 542
K + ++ G ++ L +P+ + G +D + ++ L VTF GHK I S+
Sbjct: 54 KGEKILILQGLKHEVTCLCPSPDGLHLAVGYEDGSIRIFSLLSGEGNVTFNGHKAAITSL 113
Query: 543 EFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLV 602
++ + + + S D I +W + + S L +GH ++ +A FL +V+ G D +V
Sbjct: 114 KYDQLGGRLASGSKDTDIIVWDVINESGLYRLKGHKDAITQALFLREKNLLVTSGKDTMV 173
Query: 603 KLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLW 647
K W + T C T H ++W L + + + TG SD+ + W
Sbjct: 174 KWWDLDTQHCFKTMVGHRTEVWGLVLVSEEKRLITGASDSELRAW 218
Score = 157 (60.3 bits), Expect = 1.7e-23, Sum P(2) = 1.7e-23
Identities = 38/153 (24%), Positives = 70/153 (45%)
Query: 530 VTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTR 589
+T GH+ + ++ FS + +++A+ D +IKIW+ S C++T L + F+
Sbjct: 409 ITIGGHRSDVRTLSFSSDNIAILSAAAD-SIKIWNRSTLQCIRTMA--CEYALCSFFVPG 465
Query: 590 GAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLWHD 649
Q+V G ++L+ + +G + T D H+ +W+L++ F TGG+D V W
Sbjct: 466 DRQVVIGTKTGKLQLYDLASGNLLETIDAHDGALWSLSLSPDQRGFVTGGADKSVKFWDF 525
Query: 650 STXXXXXXXXXXXXXXVLRGQELENAVLDADYT 682
R +L+ VL Y+
Sbjct: 526 ELVKDENSTQKRLSVKQTRTLQLDEEVLCVSYS 558
Score = 135 (52.6 bits), Expect = 4.2e-05, P = 4.2e-05
Identities = 32/128 (25%), Positives = 55/128 (42%)
Query: 63 ITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGA 122
+ + +S D L+ + R +++W L C +S HD + + P L TAG
Sbjct: 594 VICMDISYDGALIATGSADRNVKIWGLDFGDCHKSLFAHDDSVMYLRFVPKSHLFFTAGK 653
Query: 123 DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVA 182
DRK+ WD D +GH + + P D + S S D ++R+W+ + +
Sbjct: 654 DRKIKQWDADKFEHIQTLEGHHQEIWCLAVSPSGD--YVVSSSHDKSLRLWERTREPLIL 711
Query: 183 TLDKHFSR 190
+K R
Sbjct: 712 EEEKEMQR 719
Score = 84 (34.6 bits), Expect = 6.7e-16, Sum P(2) = 6.7e-16
Identities = 19/81 (23%), Positives = 40/81 (49%)
Query: 347 KRLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCA 406
K L +++ ++ L+F+ + + + +++ +D L GH + + CL A
Sbjct: 627 KSLFAHDDSVMYLRFVPKSHLFFTAGKD-RKIKQWDADKFEHIQTLEGHHQEIWCL---A 682
Query: 407 LSSGKILIVTGSKDNSVRLWD 427
+S +V+ S D S+RLW+
Sbjct: 683 VSPSGDYVVSSSHDKSLRLWE 703
>UNIPROTKB|F1SAY9 [details] [associations]
symbol:WDR3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0031965 "nuclear membrane" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0031965 InterPro:IPR020472
PRINTS:PR00320 InterPro:IPR007148 Pfam:PF04003
GeneTree:ENSGT00550000074925 OMA:SIFAHDD EMBL:FP085476
EMBL:CU468902 Ensembl:ENSSSCT00000007369 Uniprot:F1SAY9
Length = 943
Score = 364 (133.2 bits), Expect = 5.3e-30, P = 5.3e-30
Identities = 151/651 (23%), Positives = 271/651 (41%)
Query: 25 LVVSSDGSFIACACGE-SINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSRE 83
L S DG +A + SI I L + T G +T+L L S +
Sbjct: 71 LCPSPDGLHLAVGYEDGSIRIFSLLSGEGNVTFNGHKAAVTSLKYDQLGGRLASGSKDTD 130
Query: 84 IRVWDLSTLKCLRSWKGHDGPAIGMACH-PSGGLLATAGADRKVLVWDVDGGFCTHYFKG 142
I VWD+ L KGH AI A LL ++G D V WD+D C G
Sbjct: 131 IIVWDVINESGLYRLKGHKD-AITQALFLREKNLLVSSGKDTMVKWWDLDTQHCFKTVVG 189
Query: 143 HKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLD-------KHFS-RVTSM 194
H+ V ++ + +K L+ +G+ D+ +R WD+ + + + K S R+
Sbjct: 190 HRTEVWGLVLVSE-EKRLI-TGASDSELRAWDIAYLEEIEDPEEPEPKKIKGSSPRMQDT 247
Query: 195 AITSDGST-LISAGRDKVVN-------LWDLRDYSCKLTVPTYEMVEAVCAIPPGSAFDS 246
T DG+ + A D+++ + + RD L V + A C G+ DS
Sbjct: 248 DETEDGTLEMDEAPEDRILTCRKAGSIMREGRDRVVNLAVDRTGRILA-CH---GT--DS 301
Query: 247 FLSSYNQQTIKKKRRSLEIHFITVGERGIVRMWNADSACLYEQKSSDVTISFEMDDSKRG 306
L + +I++ ++ ++ ++ + + L + S ++T+ E+
Sbjct: 302 VLEVFRVLSIEEIQKKMDKKLKKARKKAKLNSGKEEEEDL--EVSVEMTLQDEIQRVTNI 359
Query: 307 FTAAT-----VLPSNQG-LLCVTADQQLL--LYTTV-EVPEKKMELILSKRLVGYNEEIL 357
T+A V+ S QG L V Q L LY+ VP + + G+ ++
Sbjct: 360 KTSAKIKSFDVIHSPQGELKAVFLLQNNLVELYSVYPSVPASQPVRTSRITIGGHRSDVR 419
Query: 358 DLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTG 417
L F + L+ A E +++++ S++ C + E LC G +V G
Sbjct: 420 TLSFSSDNIAVLSGAA--ESIKIWNRSTLQCIRTMT--CEYALC---SFFVPGDRQVVIG 472
Query: 418 SKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDD 477
+K ++L+D S + H GA+ +++ S + F V+G +D ++K W F+ + D+
Sbjct: 473 TKTGKLQLYDLASGNLLETVDAHDGALWSLSLSPDQRGF-VTGGADKSVKFWDFELVKDE 531
Query: 478 AEQPMNLKAKAVVAAH-GKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHK 536
L K +++ ++ +PN L+ D T ++ + L ++ GHK
Sbjct: 532 NSTQKRLSVKQTRTLQLDEEVLCVSYSPNQKLLAVSLLDCTVKIFYVDTLKFFLSLYGHK 591
Query: 537 RGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSC 596
+ ++ S ++ T S D+ +KIW + G C K+ H SV+ F+ + +
Sbjct: 592 LPVICMDISYDGALIATGSADRNVKIWGLDFGDCHKSLFAHDDSVMYLKFVPKSHLFFTA 651
Query: 597 GADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLW 647
G D +K W E + T + H +IW LA+ + + D + LW
Sbjct: 652 GKDRKIKQWDADKFEHVQTLEGHHQEIWCLAISPSGDYVVSSSHDKSLRLW 702
Score = 205 (77.2 bits), Expect = 1.8e-24, Sum P(2) = 1.8e-24
Identities = 52/187 (27%), Positives = 83/187 (44%)
Query: 31 GSFIACACGESINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLS 90
G ++A E + I DL ++G +T L SPD L IR++ L
Sbjct: 36 GRYVAVPACEHVFIWDLRKGEKILILQGLKHEVTCLCPSPDGLHLAVGYEDGSIRIFSLL 95
Query: 91 TLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSI 150
+ + ++ GH + GG LA+ D ++VWDV + KGHK ++
Sbjct: 96 SGEGNVTFNGHKAAVTSLKYDQLGGRLASGSKDTDIIVWDVINESGLYRLKGHKDAITQA 155
Query: 151 LFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDK 210
LF +K+LL S D V+ WDL + C T+ H + V + + S+ LI+ D
Sbjct: 156 LFL--REKNLLVSSGKDTMVKWWDLDTQHCFKTVVGHRTEVWGLVLVSEEKRLITGASDS 213
Query: 211 VVNLWDL 217
+ WD+
Sbjct: 214 ELRAWDI 220
Score = 204 (76.9 bits), Expect = 1.5e-12, P = 1.5e-12
Identities = 48/156 (30%), Positives = 76/156 (48%)
Query: 61 DTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATA 120
+ + ++ SP+ KLL S ++++ + TLK S GH P I M G L+AT
Sbjct: 550 EEVLCVSYSPNQKLLAVSLLDCTVKIFYVDTLKFFLSLYGHKLPVICMDISYDGALIATG 609
Query: 121 GADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKC 180
ADR V +W +D G C H V + F P + L F+ D ++ WD +
Sbjct: 610 SADRNVKIWGLDFGDCHKSLFAHDDSVMYLKFVPKSH--LFFTAGKDRKIKQWDADKFEH 667
Query: 181 VATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWD 216
V TL+ H + +AI+ G ++S+ DK + LW+
Sbjct: 668 VQTLEGHHQEIWCLAISPSGDYVVSSSHDKSLRLWE 703
Score = 196 (74.1 bits), Expect = 1.1e-11, P = 1.1e-11
Identities = 43/165 (26%), Positives = 79/165 (47%)
Query: 485 KAKAVVAAHG--KDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSV 542
K + ++ G ++ L +P+ + G +D + ++ L VTF GHK + S+
Sbjct: 54 KGEKILILQGLKHEVTCLCPSPDGLHLAVGYEDGSIRIFSLLSGEGNVTFNGHKAAVTSL 113
Query: 543 EFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLV 602
++ + + + S D I +W + + S L +GH ++ +A FL +VS G D +V
Sbjct: 114 KYDQLGGRLASGSKDTDIIVWDVINESGLYRLKGHKDAITQALFLREKNLLVSSGKDTMV 173
Query: 603 KLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLW 647
K W + T C T H ++W L + + + TG SD+ + W
Sbjct: 174 KWWDLDTQHCFKTVVGHRTEVWGLVLVSEEKRLITGASDSELRAW 218
Score = 163 (62.4 bits), Expect = 1.8e-24, Sum P(2) = 1.8e-24
Identities = 41/160 (25%), Positives = 70/160 (43%)
Query: 524 PDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLR 583
P S +T GH+ + ++ FS D + + + ++IKIW+ S C++T T
Sbjct: 403 PVRTSRITIGGHRSDVRTLSFSS-DNIAVLSGAAESIKIWNRSTLQCIRTM---TCEYAL 458
Query: 584 ASFLTRGAQIVSCGAD-GLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDA 642
SF G + V G G ++L+ + +G + T D H+ +W+L++ F TGG+D
Sbjct: 459 CSFFVPGDRQVVIGTKTGKLQLYDLASGNLLETVDAHDGALWSLSLSPDQRGFVTGGADK 518
Query: 643 LVNLWHDSTXXXXXXXXXXXXXXVLRGQELENAVLDADYT 682
V W R +L+ VL Y+
Sbjct: 519 SVKFWDFELVKDENSTQKRLSVKQTRTLQLDEEVLCVSYS 558
Score = 134 (52.2 bits), Expect = 5.4e-05, P = 5.4e-05
Identities = 31/128 (24%), Positives = 55/128 (42%)
Query: 63 ITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGA 122
+ + +S D L+ + R +++W L C +S HD + + P L TAG
Sbjct: 594 VICMDISYDGALIATGSADRNVKIWGLDFGDCHKSLFAHDDSVMYLKFVPKSHLFFTAGK 653
Query: 123 DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVA 182
DRK+ WD D +GH + + P D + S S D ++R+W+ + +
Sbjct: 654 DRKIKQWDADKFEHVQTLEGHHQEIWCLAISPSGD--YVVSSSHDKSLRLWERTREPLIL 711
Query: 183 TLDKHFSR 190
++ R
Sbjct: 712 EEEREMQR 719
Score = 88 (36.0 bits), Expect = 1.2e-16, Sum P(2) = 1.2e-16
Identities = 20/81 (24%), Positives = 40/81 (49%)
Query: 347 KRLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCA 406
K L +++ ++ LKF+ + + + +++ +D L GH + + CL A
Sbjct: 627 KSLFAHDDSVMYLKFVPKSHLFFTAGKD-RKIKQWDADKFEHVQTLEGHHQEIWCL---A 682
Query: 407 LSSGKILIVTGSKDNSVRLWD 427
+S +V+ S D S+RLW+
Sbjct: 683 ISPSGDYVVSSSHDKSLRLWE 703
>ZFIN|ZDB-GENE-050419-255 [details] [associations]
symbol:daw1 "dynein assembly factor with WDR repeat
domains 1" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] [GO:0007368 "determination of
left/right symmetry" evidence=IMP] [GO:0070286 "axonemal dynein
complex assembly" evidence=IMP] [GO:0060271 "cilium morphogenesis"
evidence=IMP] [GO:0060285 "ciliary cell motility" evidence=IMP]
[GO:0042995 "cell projection" evidence=IEA] [GO:0005929 "cilium"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-050419-255 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005929
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007368
GeneTree:ENSGT00700000104017 GO:GO:0060271 GO:GO:0070286
GO:GO:0060285 EMBL:BX908751 CTD:164781 HOGENOM:HOG000253909
HOVERGEN:HBG103651 EMBL:BC124403 EMBL:BC124455 IPI:IPI00504169
RefSeq:NP_001037817.1 UniGene:Dr.108235 ProteinModelPortal:Q1LV15
Ensembl:ENSDART00000142790 GeneID:556760 KEGG:dre:556760
InParanoid:Q05AM0 NextBio:20881649 ArrayExpress:Q1LV15 Bgee:Q1LV15
Uniprot:Q1LV15
Length = 415
Score = 330 (121.2 bits), Expect = 5.8e-29, P = 5.8e-29
Identities = 79/300 (26%), Positives = 139/300 (46%)
Query: 349 LVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALS 408
L G+ + + F +A + + +++ + C Y GH+ ++CL A +
Sbjct: 130 LEGHRNVVYAIAFNNPYGDKVATGSFDKTCKLWSAETGKCFYTFRGHTAEIVCL---AFN 186
Query: 409 SGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKV 468
L+ TGS D + +LWD ES V GH + ++ F+ LV+GS DHT +
Sbjct: 187 PQSTLVATGSMDTTAKLWDVESGEEVSTLAGHFAEIISLCFNTTGDR-LVTGSFDHTAIL 245
Query: 469 WSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVS 528
W + P K V++ H +I+ + + SL+ T S D++ VW
Sbjct: 246 W---------DVPSGRKVH-VLSGHRGEISCVQFNWDCSLIATASLDKSCKVWDAEGGQC 295
Query: 529 VVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLT 588
+ T GH + V F+ Q++ TAS D T +++S CL EGH + + F
Sbjct: 296 LATLLGHNDEVLDVCFNYTGQLIATASADGTSRVFSTDTFQCLCQLEGHKGEISKVCFNA 355
Query: 589 RGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLWH 648
+G+++++ D ++W V+TG C+ + H D+I++ A + + TG D +WH
Sbjct: 356 QGSRVLTASVDKTSRVWCVKTGACLQVLEGHSDEIFSCAFNYEGDTIITGSKDNTCRIWH 415
Score = 259 (96.2 bits), Expect = 1.7e-19, P = 1.7e-19
Identities = 70/253 (27%), Positives = 109/253 (43%)
Query: 399 VLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLV 458
+L L A + +TGS D + ++WD+ S + GH V A+AF+ + +
Sbjct: 92 ILPLTNVAFNKSGSCFITGSYDRTCKIWDTASGEELHTLEGHRNVVYAIAFNNPYGDKVA 151
Query: 459 SGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTA 518
+GS D T K+WS AE K H +I LA P +LV TGS D TA
Sbjct: 152 TGSFDKTCKLWS-------AETG---KCFYTFRGHTAEIVCLAFNPQSTLVATGSMDTTA 201
Query: 519 CVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHT 578
+W + V T GH I S+ F+ ++T S D T +W + G + GH
Sbjct: 202 KLWDVESGEEVSTLAGHFAEIISLCFNTTGDRLVTGSFDHTAILWDVPSGRKVHVLSGHR 261
Query: 579 SSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATG 638
+ F + I + D K+W G+C+AT H D++ + ++ AT
Sbjct: 262 GEISCVQFNWDCSLIATASLDKSCKVWDAEGGQCLATLLGHNDEVLDVCFNYTGQLIATA 321
Query: 639 GSDALVNLWHDST 651
+D ++ T
Sbjct: 322 SADGTSRVFSTDT 334
Score = 246 (91.7 bits), Expect = 5.5e-18, P = 5.5e-18
Identities = 102/421 (24%), Positives = 181/421 (42%)
Query: 18 QFYGGGPLVVSSDGSFIACACGESINIVDLSNAS-IKSTIEGGSDTITALALSPDDKLLF 76
++Y G + G + C + +N+ ++ + I IT+ + KLL
Sbjct: 9 RYYPPGIFLDYEKGGQLRTKCIDLLNLTPETDVEELVLEIRAAEPLITSSCVE-QVKLLI 67
Query: 77 SSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFC 136
+ + D R+ + H P +A + SG T DR +WD G
Sbjct: 68 CKLQEK-VGQKDERKFYLFRALQAHILPLTNVAFNKSGSCFITGSYDRTCKIWDTASGEE 126
Query: 137 THYFKGHKGVVSSILFH-PDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMA 195
H +GH+ VV +I F+ P DK + +GS D T ++W KC T H + + +A
Sbjct: 127 LHTLEGHRNVVYAIAFNNPYGDK--VATGSFDKTCKLWSAETGKCFYTFRGHTAEIVCLA 184
Query: 196 ITSDGSTLISAGR-DKVVNLWDLRDYSCKLTVPTY--EMVEAVCAIPPGSAFDSFLSSYN 252
STL++ G D LWD+ T+ + E++ ++C G + S++
Sbjct: 185 FNPQ-STLVATGSMDTTAKLWDVESGEEVSTLAGHFAEII-SLCFNTTGDRLVT--GSFD 240
Query: 253 QQTIKKKRRS-LEIHFITVGERGIVRMWNADSAC-LYEQKSSDVTISFEMDDSKRGFTAA 310
I S ++H ++ G RG + + C L S D S ++ D++ G A
Sbjct: 241 HTAILWDVPSGRKVHVLS-GHRGEISCVQFNWDCSLIATASLDK--SCKVWDAEGGQCLA 297
Query: 311 TVLPSNQGLL--CVTADQQLLLYTTVEVPEKKMELILSK---RLVGYNEEILDLKFLGEE 365
T+L N +L C QL+ + + + + +L G+ EI + F +
Sbjct: 298 TLLGHNDEVLDVCFNYTGQLIATASADGTSRVFSTDTFQCLCQLEGHKGEISKVCFNAQG 357
Query: 366 EQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRL 425
+ L + + + +V+ + + +C VL GHS+ + +CA + I+TGSKDN+ R+
Sbjct: 358 SRVLTASVD-KTSRVWCVKTGACLQVLEGHSDEIF---SCAFNYEGDTIITGSKDNTCRI 413
Query: 426 W 426
W
Sbjct: 414 W 414
Score = 224 (83.9 bits), Expect = 1.7e-15, P = 1.7e-15
Identities = 49/157 (31%), Positives = 75/157 (47%)
Query: 492 AHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFS-PVDQV 550
AH + ++A + S TGS DRT +W + T GH+ ++++ F+ P
Sbjct: 90 AHILPLTNVAFNKSGSCFITGSYDRTCKIWDTASGEELHTLEGHRNVVYAIAFNNPYGDK 149
Query: 551 VITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTG 610
V T S DKT K+WS G C TF GHT+ ++ +F + + + D KLW V +G
Sbjct: 150 VATGSFDKTCKLWSAETGKCFYTFRGHTAEIVCLAFNPQSTLVATGSMDTTAKLWDVESG 209
Query: 611 ECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLW 647
E ++T H +I +L + TG D LW
Sbjct: 210 EEVSTLAGHFAEIISLCFNTTGDRLVTGSFDHTAILW 246
Score = 170 (64.9 bits), Expect = 1.8e-09, P = 1.8e-09
Identities = 39/116 (33%), Positives = 56/116 (48%)
Query: 533 RGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQ 592
+ H + +V F+ IT S D+T KIW + G L T EGH + V +F
Sbjct: 89 QAHILPLTNVAFNKSGSCFITGSYDRTCKIWDTASGEELHTLEGHRNVVYAIAFNNPYGD 148
Query: 593 IVSCGA-DGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLW 647
V+ G+ D KLW+ TG+C T+ H +I LA ++ + ATG D LW
Sbjct: 149 KVATGSFDKTCKLWSAETGKCFYTFRGHTAEIVCLAFNPQSTLVATGSMDTTAKLW 204
>UNIPROTKB|E1BR73 [details] [associations]
symbol:APAF1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005622 "intracellular" evidence=IEA] [GO:0006952
"defense response" evidence=IEA] [GO:0042981 "regulation of
apoptotic process" evidence=IEA] [GO:0043531 "ADP binding"
evidence=IEA] InterPro:IPR017986 InterPro:IPR000767
InterPro:IPR001315 InterPro:IPR001680 InterPro:IPR002182
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00619 Pfam:PF00931
PRINTS:PR00364 PROSITE:PS50082 PROSITE:PS50209 PROSITE:PS50294
SMART:SM00114 SMART:SM00320 GO:GO:0006952 GO:GO:0042981
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043531
GO:GO:0005622 Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986
GeneTree:ENSGT00700000104017 EMBL:AADN02005970 IPI:IPI00597741
ProteinModelPortal:E1BR73 Ensembl:ENSGALT00000018802
ArrayExpress:E1BR73 Uniprot:E1BR73
Length = 1251
Score = 182 (69.1 bits), Expect = 5.1e-10, P = 5.1e-10
Identities = 46/171 (26%), Positives = 79/171 (46%)
Query: 56 IEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPSGG 115
++G + I A + KLL S ++VW+++T K + + H G + A P G
Sbjct: 1042 LKGHKEAIKDFAFLENSKLL-SWSFDGTVKVWNITTGKTEKDFACHRGAVLSCAVSPDGS 1100
Query: 116 LLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDL 175
++ AD+ +W + H KGH+ V F P LL +G D +R+WD+
Sbjct: 1101 RFSSTSADKTAKIWSFESSSVLHELKGHEACVRCSAFSPSN--KLLATGDDKGDIRIWDI 1158
Query: 176 LAKK----CVA-TLDK----HFSRVTSMAITSDGSTLISAGRDKVVNLWDL 217
L + C + T+D+ H VT ++ + D L+S+G + WD+
Sbjct: 1159 LTGELLHFCSSVTVDEEEPTHGGWVTDLSFSPDSKMLVSSGG--YLKWWDV 1207
Score = 179 (68.1 bits), Expect = 1.1e-28, Sum P(3) = 1.1e-28
Identities = 63/243 (25%), Positives = 108/243 (44%)
Query: 405 CALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNF-LVSGSSD 463
C ++ +++ + D +++W+ + CV + GH A+ AF L+N L+S S D
Sbjct: 1011 CRFTTDCQTLISSAHDAVIQVWNWQLNECVFL-KGHKEAIKDFAF---LENSKLLSWSFD 1066
Query: 464 HTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRL 523
T+KVW+ K + A H + S AV+P+ S + S D+TA +W
Sbjct: 1067 GTVKVWNIT----------TGKTEKDFACHRGAVLSCAVSPDGSRFSSTSADKTAKIWSF 1116
Query: 524 PDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLK-----TFEG-- 576
+ +GH+ + FSP ++++ T I+IW I G L T +
Sbjct: 1117 ESSSVLHELKGHEACVRCSAFSPSNKLLATGDDKGDIRIWDILTGELLHFCSSVTVDEEE 1176
Query: 577 --HTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEM 634
H V SF +VS G G +K W V TGE + T+ + + ++ V ++
Sbjct: 1177 PTHGGWVTDLSFSPDSKMLVSSG--GYLKWWDVTTGESLQTFYTNGTNLKSIHVSPNFDV 1234
Query: 635 FAT 637
+ T
Sbjct: 1235 YVT 1237
Score = 176 (67.0 bits), Expect = 1.1e-28, Sum P(3) = 1.1e-28
Identities = 51/207 (24%), Positives = 89/207 (42%)
Query: 12 CEPVLQQFYGGGPLVVSSD-GSFIACACGESINIVDLSNASIKSTIEGGSDTITALALSP 70
C+P + Y L + G+F E IN L N S + + D + S
Sbjct: 570 CQPETSEVYQQAKLRAQRETGTFYL----EWINKKSLKNLS-RLVVRPHRDAVYHACFSR 624
Query: 71 DDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWD 130
D + + S G + ++V+ + + L HD + +AT AD+KV +W+
Sbjct: 625 DRQRIASCGADKTLQVFKAESGERLLEISAHDDEILCCTFSADDKYVATCSADKKVKIWN 684
Query: 131 VDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSR 190
G C + ++ H V+ F+ + LL + SDD +++WDL K C T+ H +
Sbjct: 685 SRTGKCLYVYEEHTEQVNCCQFNNRRGQYLLATCSDDTYIKLWDLKDKYCRNTMFGHVNA 744
Query: 191 VTSMAITSDGSTLISAGRDKVVNLWDL 217
V+ + + + S D V LW++
Sbjct: 745 VSHCRFSPNDDYIASCSTDGTVKLWNV 771
Score = 167 (63.8 bits), Expect = 2.1e-08, P = 2.1e-08
Identities = 44/168 (26%), Positives = 71/168 (42%)
Query: 483 NLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSV 542
NL ++ VV H + + + + + D+T V++ ++ H I
Sbjct: 604 NL-SRLVVRPHRDAVYHACFSRDRQRIASCGADKTLQVFKAESGERLLEISAHDDEILCC 662
Query: 543 EFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQ--IVSCGADG 600
FS D+ V T S DK +KIW+ G CL +E HT V F R Q + +C D
Sbjct: 663 TFSADDKYVATCSADKKVKIWNSRTGKCLYVYEEHTEQVNCCQFNNRRGQYLLATCSDDT 722
Query: 601 LVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLWH 648
+KLW ++ C T H + + + A+ +D V LW+
Sbjct: 723 YIKLWDLKDKYCRNTMFGHVNAVSHCRFSPNDDYIASCSTDGTVKLWN 770
Score = 163 (62.4 bits), Expect = 5.7e-08, P = 5.7e-08
Identities = 46/180 (25%), Positives = 77/180 (42%)
Query: 440 HMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINS 499
H AV FS+ Q + S +D T++V+ ++ E+ + ++AH +I
Sbjct: 613 HRDAVYHACFSRDRQR-IASCGADKTLQVFK----AESGERLLE------ISAHDDEILC 661
Query: 500 LAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPV--DQVVITASGD 557
+ +D V T S D+ +W + + H + +F+ ++ T S D
Sbjct: 662 CTFSADDKYVATCSADKKVKIWNSRTGKCLYVYEEHTEQVNCCQFNNRRGQYLLATCSDD 721
Query: 558 KTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYD 617
IK+W + D C T GH ++V F I SC DG VKLW V + + T +
Sbjct: 722 TYIKLWDLKDKYCRNTMFGHVNAVSHCRFSPNDDYIASCSTDGTVKLWNVHSANELRTIE 781
Score = 158 (60.7 bits), Expect = 7.7e-27, Sum P(3) = 7.7e-27
Identities = 44/167 (26%), Positives = 75/167 (44%)
Query: 28 SSDGSFIA-CACGESINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRV 86
S D IA C +++ + + I D I S DDK + + +++++
Sbjct: 623 SRDRQRIASCGADKTLQVFKAESGERLLEISAHDDEILCCTFSADDKYVATCSADKKVKI 682
Query: 87 WDLSTLKCLRSWKGHDGPAIGMACHPSGG--LLATAGADRKVLVWDVDGGFCTHYFKGHK 144
W+ T KCL ++ H + G LLAT D + +WD+ +C + GH
Sbjct: 683 WNSRTGKCLYVYEEHTEQVNCCQFNNRRGQYLLATCSDDTYIKLWDLKDKYCRNTMFGHV 742
Query: 145 GVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLD-KHFSR 190
VS F P+ D + S S D TV++W++ + + T++ K F R
Sbjct: 743 NAVSHCRFSPNDD--YIASCSTDGTVKLWNVHSANELRTIEIKDFFR 787
Score = 151 (58.2 bits), Expect = 9.6e-20, Sum P(2) = 9.6e-20
Identities = 63/297 (21%), Positives = 123/297 (41%)
Query: 321 CVTADQQLLLYTTVEVPEKKMELILSKRLVGYNEEIL--DLKFLGEEEQYLAVAT-NIEQ 377
CVT L+ T ++ + + + ++ ++ +L +L + + + +A N +
Sbjct: 886 CVTFSSDGSLFLTSS-EDQTIRIWETNKVCKSSDAVLKSELDVVFHNGEVMILAIYNQKH 944
Query: 378 VQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVG 437
+Q+ + ++ S ++ C C LS G ++ ++++ +
Sbjct: 945 IQLINGNTDSIIMQTEPQESLICC---CCLSEDLKFAAFGQENGAIKVLRLLDGRVLTSR 1001
Query: 438 TGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDI 497
+ +V F+ Q L+S + D I+VW++ L + H + I
Sbjct: 1002 EAYRTSVQHCRFTTDCQT-LISSAHDAVIQVWNWQ-----------LNECVFLKGHKEAI 1049
Query: 498 NSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGD 557
A N L+ + S D T VW + + F H+ + S SP + S D
Sbjct: 1050 KDFAFLENSKLL-SWSFDGTVKVWNITTGKTEKDFACHRGAVLSCAVSPDGSRFSSTSAD 1108
Query: 558 KTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGAD-GLVKLWTVRTGECI 613
KT KIWS S L +GH + V R S + ++++ G D G +++W + TGE +
Sbjct: 1109 KTAKIWSFESSSVLHELKGHEACV-RCSAFSPSNKLLATGDDKGDIRIWDILTGELL 1164
Score = 145 (56.1 bits), Expect = 5.0e-06, P = 5.0e-06
Identities = 46/178 (25%), Positives = 79/178 (44%)
Query: 41 SINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKG 100
+I ++ L + + ++ E ++ + D + L SS H I+VW+ +C+ KG
Sbjct: 986 AIKVLRLLDGRVLTSREAYRTSVQHCRFTTDCQTLISSAHDAVIQVWNWQLNECV-FLKG 1044
Query: 101 HDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSL 160
H A + LL+ + D V VW++ G F H+G V S PD +
Sbjct: 1045 HKEAIKDFAFLENSKLLSWS-FDGTVKVWNITTGKTEKDFACHRGAVLSCAVSPDGSR-- 1101
Query: 161 LFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKV-VNLWDL 217
S S D T ++W + + L H + V A S + L++ G DK + +WD+
Sbjct: 1102 FSSTSADKTAKIWSFESSSVLHELKGHEACVRCSAF-SPSNKLLATGDDKGDIRIWDI 1158
Score = 143 (55.4 bits), Expect = 5.8e-25, Sum P(3) = 5.8e-25
Identities = 35/137 (25%), Positives = 59/137 (43%)
Query: 511 TGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSC 570
+ + D VW L V +GHK I F + +++ S D T+K+W+I+ G
Sbjct: 1022 SSAHDAVIQVWNW-QLNECVFLKGHKEAIKDFAFLE-NSKLLSWSFDGTVKVWNITTGKT 1079
Query: 571 LKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGK 630
K F H +VL + G++ S AD K+W+ + + HE + A
Sbjct: 1080 EKDFACHRGAVLSCAVSPDGSRFSSTSADKTAKIWSFESSSVLHELKGHEACVRCSAFSP 1139
Query: 631 KTEMFATGGSDALVNLW 647
++ ATG + +W
Sbjct: 1140 SNKLLATGDDKGDIRIW 1156
Score = 136 (52.9 bits), Expect = 3.8e-06, Sum P(2) = 3.8e-06
Identities = 73/337 (21%), Positives = 126/337 (37%)
Query: 319 LLCVT--ADQQLLLYTTVEVPEKKMELILSKRLVGYNE---EILDLKFLGEEEQYL-AVA 372
+LC T AD + + + + K K L Y E ++ +F QYL A
Sbjct: 659 ILCCTFSADDKYVATCSADKKVKIWNSRTGKCLYVYEEHTEQVNCCQFNNRRGQYLLATC 718
Query: 373 TNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRC 432
++ ++++DL C + GH V + C S I + S D +V+LW+ S
Sbjct: 719 SDDTYIKLWDLKDKYCRNTMFGH---VNAVSHCRFSPNDDYIASCSTDGTVKLWNVHSAN 775
Query: 433 ---CVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAV 489
+ + A + L S TI V + + L NL + +
Sbjct: 776 ELRTIEIKDFFRNADEQQDDVEVLVKCCSWSRSSDTILVVAKNKLLLFDVTTSNLLTQVI 835
Query: 490 VAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQ 549
++ H I D LV + +W + L V RGH + V FS
Sbjct: 836 ISHHST-IQYCDFCAGDELVAVALSHCSIELWNIKSLSKVADCRGHTSWVHCVTFSSDGS 894
Query: 550 VVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRT 609
+ +T+S D+TI+IW ++ C K+ + S L F I++ ++L T
Sbjct: 895 LFLTSSEDQTIRIWE-TNKVC-KSSDAVLKSELDVVFHNGEVMILAIYNQKHIQLINGNT 952
Query: 610 GECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNL 646
I + E I + + + A G + + +
Sbjct: 953 DSIIMQTEPQESLICCCCLSEDLKFAAFGQENGAIKV 989
Score = 133 (51.9 bits), Expect = 9.7e-05, P = 9.7e-05
Identities = 49/201 (24%), Positives = 74/201 (36%)
Query: 42 INIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGH 101
I +++ + SI E I LS D K + I+V L + L S + +
Sbjct: 945 IQLINGNTDSIIMQTEPQESLICCCCLSEDLKFAAFGQENGAIKVLRLLDGRVLTSREAY 1004
Query: 102 DGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLL 161
L ++ D + VW+ C + KGHK + F + S L
Sbjct: 1005 RTSVQHCRFTTDCQTLISSAHDAVIQVWNWQLNECV-FLKGHKEAIKDFAF---LENSKL 1060
Query: 162 FSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYS 221
S S D TV+VW++ K H V S A++ DGS S DK +W S
Sbjct: 1061 LSWSFDGTVKVWNITTGKTEKDFACHRGAVLSCAVSPDGSRFSSTSADKTAKIWSFESSS 1120
Query: 222 CKLTVPTYEMVEAVCAIPPGS 242
+ +E A P +
Sbjct: 1121 VLHELKGHEACVRCSAFSPSN 1141
Score = 116 (45.9 bits), Expect = 1.7e-22, Sum P(3) = 1.7e-22
Identities = 38/146 (26%), Positives = 67/146 (45%)
Query: 117 LATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLL 176
+A+ GAD+ + V+ + G H + F D DK + + S D V++W+
Sbjct: 629 IASCGADKTLQVFKAESGERLLEISAHDDEILCCTFSAD-DKYVA-TCSADKKVKIWNSR 686
Query: 177 AKKCVATLDKHFSRVTSMAITSD-GSTLISA-GRDKVVNLWDLRDYSCKLTVPTYEMVEA 234
KC+ ++H +V + G L++ D + LWDL+D C+ T+ + V A
Sbjct: 687 TGKCLYVYEEHTEQVNCCQFNNRRGQYLLATCSDDTYIKLWDLKDKYCRNTM--FGHVNA 744
Query: 235 V--CAIPPGSAFDSFLSSYNQQ-TIK 257
V C P D +++S + T+K
Sbjct: 745 VSHCRFSPN---DDYIASCSTDGTVK 767
Score = 106 (42.4 bits), Expect = 1.1e-28, Sum P(3) = 1.1e-28
Identities = 38/163 (23%), Positives = 77/163 (47%)
Query: 274 GIVRMWNADSACLYEQKSSDVTISFEMDDSKRGFTAATVL----PSNQGLLCVTADQQLL 329
G V++WN SA E ++ ++ F D ++ V + + V A +LL
Sbjct: 764 GTVKLWNVHSA--NELRTIEIKDFFRNADEQQDDVEVLVKCCSWSRSSDTILVVAKNKLL 821
Query: 330 LYTTVEVPEKKMELILSKRLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCS 389
L+ +V + L++ ++ ++ I F +E +AVA + ++++++ S+S
Sbjct: 822 LF---DVTTSNL---LTQVIISHHSTIQYCDFCAGDE-LVAVALSHCSIELWNIKSLSKV 874
Query: 390 YVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRC 432
GH+ V C+ SS L +T S+D ++R+W++ C
Sbjct: 875 ADCRGHTSWVHCV---TFSSDGSLFLTSSEDQTIRIWETNKVC 914
Score = 92 (37.4 bits), Expect = 6.2e-14, Sum P(2) = 6.2e-14
Identities = 37/184 (20%), Positives = 81/184 (44%)
Query: 41 SINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKG 100
SI + ++ + S + G + + + S D L +S + IR+W+ T K +S
Sbjct: 862 SIELWNIKSLSKVADCRGHTSWVHCVTFSSDGSLFLTSSEDQTIRIWE--TNKVCKSSDA 919
Query: 101 HDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGH--KGVVSSILFHPDTDK 158
+ + H +G ++ A ++K + ++G + + + ++ D K
Sbjct: 920 VLKSELDVVFH-NGEVMILAIYNQKHIQL-INGNTDSIIMQTEPQESLICCCCLSEDL-K 976
Query: 159 SLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLR 218
F G ++ ++V LL + + + + + + V T+D TLIS+ D V+ +W+ +
Sbjct: 977 FAAF-GQENGAIKVLRLLDGRVLTSREAYRTSVQHCRFTTDCQTLISSAHDAVIQVWNWQ 1035
Query: 219 DYSC 222
C
Sbjct: 1036 LNEC 1039
Score = 66 (28.3 bits), Expect = 6.4e-11, Sum P(2) = 6.4e-11
Identities = 45/254 (17%), Positives = 101/254 (39%)
Query: 398 IVLCLDTCALSSGKILIVTGSKDNSVRLWD-SESRCCVGVGTGHMGAVGAVAFSKKLQNF 456
+V C + + SS IL+V N + L+D + S V H + F +
Sbjct: 799 LVKCC-SWSRSSDTILVVA---KNKLLLFDVTTSNLLTQVIISHHSTIQYCDFCAGDE-- 852
Query: 457 LVSGSSDH-TIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQD 515
LV+ + H +I++W+ LS A+ H ++ + + + SL T S+D
Sbjct: 853 LVAVALSHCSIELWNIKSLSKVAD----------CRGHTSWVHCVTFSSDGSLFLTSSED 902
Query: 516 RTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFE 575
+T +W + + + V F + +++ K I++ + + S + E
Sbjct: 903 QTIRIWETNKVCK--SSDAVLKSELDVVFHNGEVMILAIYNQKHIQLINGNTDSIIMQTE 960
Query: 576 GHTSSVLRASFLTRGAQIVSCGAD-GLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEM 634
S++ L+ + + G + G +K+ + G + + + + + +
Sbjct: 961 PQ-ESLICCCCLSEDLKFAAFGQENGAIKVLRLLDGRVLTSREAYRTSVQHCRFTTDCQT 1019
Query: 635 FATGGSDALVNLWH 648
+ DA++ +W+
Sbjct: 1020 LISSAHDAVIQVWN 1033
Score = 61 (26.5 bits), Expect = 7.4e-17, Sum P(3) = 7.4e-17
Identities = 16/80 (20%), Positives = 33/80 (41%)
Query: 143 HKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGST 202
H+ V F D+ + S D T++V+ + + + + H + ++D
Sbjct: 613 HRDAVYHACF--SRDRQRIASCGADKTLQVFKAESGERLLEISAHDDEILCCTFSADDKY 670
Query: 203 LISAGRDKVVNLWDLRDYSC 222
+ + DK V +W+ R C
Sbjct: 671 VATCSADKKVKIWNSRTGKC 690
Score = 61 (26.5 bits), Expect = 1.0e-10, Sum P(2) = 1.0e-10
Identities = 12/62 (19%), Positives = 28/62 (45%)
Query: 71 DDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWD 130
D+ + + H I +W++ +L + +GH + G L T+ D+ + +W+
Sbjct: 851 DELVAVALSHC-SIELWNIKSLSKVADCRGHTSWVHCVTFSSDGSLFLTSSEDQTIRIWE 909
Query: 131 VD 132
+
Sbjct: 910 TN 911
Score = 58 (25.5 bits), Expect = 9.7e-24, Sum P(3) = 9.7e-24
Identities = 12/35 (34%), Positives = 18/35 (51%)
Query: 267 FITVGERGIVRMWNADSACLYEQKSSDVTISFEMD 301
F+T E +R+W + C KSSD + E+D
Sbjct: 896 FLTSSEDQTIRIWETNKVC----KSSDAVLKSELD 926
>UNIPROTKB|F1P1P3 [details] [associations]
symbol:APAF1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005622 "intracellular" evidence=IEA] [GO:0006952
"defense response" evidence=IEA] [GO:0042981 "regulation of
apoptotic process" evidence=IEA] [GO:0043531 "ADP binding"
evidence=IEA] InterPro:IPR017986 InterPro:IPR000767
InterPro:IPR001315 InterPro:IPR001680 InterPro:IPR002182
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00619 Pfam:PF00931
PRINTS:PR00364 PROSITE:PS50082 PROSITE:PS50209 PROSITE:PS50294
SMART:SM00114 SMART:SM00320 GO:GO:0006952 GO:GO:0042981
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043531
GO:GO:0005622 Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986
GeneTree:ENSGT00700000104017 EMBL:AADN02005970 IPI:IPI00822807
Ensembl:ENSGALT00000038231 ArrayExpress:F1P1P3 Uniprot:F1P1P3
Length = 1252
Score = 182 (69.1 bits), Expect = 5.1e-10, P = 5.1e-10
Identities = 46/171 (26%), Positives = 79/171 (46%)
Query: 56 IEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPSGG 115
++G + I A + KLL S ++VW+++T K + + H G + A P G
Sbjct: 1043 LKGHKEAIKDFAFLENSKLL-SWSFDGTVKVWNITTGKTEKDFACHRGAVLSCAVSPDGS 1101
Query: 116 LLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDL 175
++ AD+ +W + H KGH+ V F P LL +G D +R+WD+
Sbjct: 1102 RFSSTSADKTAKIWSFESSSVLHELKGHEACVRCSAFSPSN--KLLATGDDKGDIRIWDI 1159
Query: 176 LAKK----CVA-TLDK----HFSRVTSMAITSDGSTLISAGRDKVVNLWDL 217
L + C + T+D+ H VT ++ + D L+S+G + WD+
Sbjct: 1160 LTGELLHFCSSVTVDEEEPTHGGWVTDLSFSPDSKMLVSSGG--YLKWWDV 1208
Score = 179 (68.1 bits), Expect = 1.1e-28, Sum P(3) = 1.1e-28
Identities = 63/243 (25%), Positives = 108/243 (44%)
Query: 405 CALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNF-LVSGSSD 463
C ++ +++ + D +++W+ + CV + GH A+ AF L+N L+S S D
Sbjct: 1012 CRFTTDCQTLISSAHDAVIQVWNWQLNECVFL-KGHKEAIKDFAF---LENSKLLSWSFD 1067
Query: 464 HTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRL 523
T+KVW+ K + A H + S AV+P+ S + S D+TA +W
Sbjct: 1068 GTVKVWNIT----------TGKTEKDFACHRGAVLSCAVSPDGSRFSSTSADKTAKIWSF 1117
Query: 524 PDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLK-----TFEG-- 576
+ +GH+ + FSP ++++ T I+IW I G L T +
Sbjct: 1118 ESSSVLHELKGHEACVRCSAFSPSNKLLATGDDKGDIRIWDILTGELLHFCSSVTVDEEE 1177
Query: 577 --HTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEM 634
H V SF +VS G G +K W V TGE + T+ + + ++ V ++
Sbjct: 1178 PTHGGWVTDLSFSPDSKMLVSSG--GYLKWWDVTTGESLQTFYTNGTNLKSIHVSPNFDV 1235
Query: 635 FAT 637
+ T
Sbjct: 1236 YVT 1238
Score = 176 (67.0 bits), Expect = 1.1e-28, Sum P(3) = 1.1e-28
Identities = 51/207 (24%), Positives = 89/207 (42%)
Query: 12 CEPVLQQFYGGGPLVVSSD-GSFIACACGESINIVDLSNASIKSTIEGGSDTITALALSP 70
C+P + Y L + G+F E IN L N S + + D + S
Sbjct: 571 CQPETSEVYQQAKLRAQRETGTFYL----EWINKKSLKNLS-RLVVRPHRDAVYHACFSR 625
Query: 71 DDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWD 130
D + + S G + ++V+ + + L HD + +AT AD+KV +W+
Sbjct: 626 DRQRIASCGADKTLQVFKAESGERLLEISAHDDEILCCTFSADDKYVATCSADKKVKIWN 685
Query: 131 VDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSR 190
G C + ++ H V+ F+ + LL + SDD +++WDL K C T+ H +
Sbjct: 686 SRTGKCLYVYEEHTEQVNCCQFNNRRGQYLLATCSDDTYIKLWDLKDKYCRNTMFGHVNA 745
Query: 191 VTSMAITSDGSTLISAGRDKVVNLWDL 217
V+ + + + S D V LW++
Sbjct: 746 VSHCRFSPNDDYIASCSTDGTVKLWNV 772
Score = 167 (63.8 bits), Expect = 2.1e-08, P = 2.1e-08
Identities = 44/168 (26%), Positives = 71/168 (42%)
Query: 483 NLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSV 542
NL ++ VV H + + + + + D+T V++ ++ H I
Sbjct: 605 NL-SRLVVRPHRDAVYHACFSRDRQRIASCGADKTLQVFKAESGERLLEISAHDDEILCC 663
Query: 543 EFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQ--IVSCGADG 600
FS D+ V T S DK +KIW+ G CL +E HT V F R Q + +C D
Sbjct: 664 TFSADDKYVATCSADKKVKIWNSRTGKCLYVYEEHTEQVNCCQFNNRRGQYLLATCSDDT 723
Query: 601 LVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLWH 648
+KLW ++ C T H + + + A+ +D V LW+
Sbjct: 724 YIKLWDLKDKYCRNTMFGHVNAVSHCRFSPNDDYIASCSTDGTVKLWN 771
Score = 163 (62.4 bits), Expect = 5.7e-08, P = 5.7e-08
Identities = 46/180 (25%), Positives = 77/180 (42%)
Query: 440 HMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINS 499
H AV FS+ Q + S +D T++V+ ++ E+ + ++AH +I
Sbjct: 614 HRDAVYHACFSRDRQR-IASCGADKTLQVFK----AESGERLLE------ISAHDDEILC 662
Query: 500 LAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPV--DQVVITASGD 557
+ +D V T S D+ +W + + H + +F+ ++ T S D
Sbjct: 663 CTFSADDKYVATCSADKKVKIWNSRTGKCLYVYEEHTEQVNCCQFNNRRGQYLLATCSDD 722
Query: 558 KTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYD 617
IK+W + D C T GH ++V F I SC DG VKLW V + + T +
Sbjct: 723 TYIKLWDLKDKYCRNTMFGHVNAVSHCRFSPNDDYIASCSTDGTVKLWNVHSANELRTIE 782
Score = 158 (60.7 bits), Expect = 7.7e-27, Sum P(3) = 7.7e-27
Identities = 44/167 (26%), Positives = 75/167 (44%)
Query: 28 SSDGSFIA-CACGESINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRV 86
S D IA C +++ + + I D I S DDK + + +++++
Sbjct: 624 SRDRQRIASCGADKTLQVFKAESGERLLEISAHDDEILCCTFSADDKYVATCSADKKVKI 683
Query: 87 WDLSTLKCLRSWKGHDGPAIGMACHPSGG--LLATAGADRKVLVWDVDGGFCTHYFKGHK 144
W+ T KCL ++ H + G LLAT D + +WD+ +C + GH
Sbjct: 684 WNSRTGKCLYVYEEHTEQVNCCQFNNRRGQYLLATCSDDTYIKLWDLKDKYCRNTMFGHV 743
Query: 145 GVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLD-KHFSR 190
VS F P+ D + S S D TV++W++ + + T++ K F R
Sbjct: 744 NAVSHCRFSPNDD--YIASCSTDGTVKLWNVHSANELRTIEIKDFFR 788
Score = 151 (58.2 bits), Expect = 9.6e-20, Sum P(2) = 9.6e-20
Identities = 63/297 (21%), Positives = 123/297 (41%)
Query: 321 CVTADQQLLLYTTVEVPEKKMELILSKRLVGYNEEIL--DLKFLGEEEQYLAVAT-NIEQ 377
CVT L+ T ++ + + + ++ ++ +L +L + + + +A N +
Sbjct: 887 CVTFSSDGSLFLTSS-EDQTIRIWETNKVCKSSDAVLKSELDVVFHNGEVMILAIYNQKH 945
Query: 378 VQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVG 437
+Q+ + ++ S ++ C C LS G ++ ++++ +
Sbjct: 946 IQLINGNTDSIIMQTEPQESLICC---CCLSEDLKFAAFGQENGAIKVLRLLDGRVLTSR 1002
Query: 438 TGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDI 497
+ +V F+ Q L+S + D I+VW++ L + H + I
Sbjct: 1003 EAYRTSVQHCRFTTDCQT-LISSAHDAVIQVWNWQ-----------LNECVFLKGHKEAI 1050
Query: 498 NSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGD 557
A N L+ + S D T VW + + F H+ + S SP + S D
Sbjct: 1051 KDFAFLENSKLL-SWSFDGTVKVWNITTGKTEKDFACHRGAVLSCAVSPDGSRFSSTSAD 1109
Query: 558 KTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGAD-GLVKLWTVRTGECI 613
KT KIWS S L +GH + V R S + ++++ G D G +++W + TGE +
Sbjct: 1110 KTAKIWSFESSSVLHELKGHEACV-RCSAFSPSNKLLATGDDKGDIRIWDILTGELL 1165
Score = 145 (56.1 bits), Expect = 5.0e-06, P = 5.0e-06
Identities = 46/178 (25%), Positives = 79/178 (44%)
Query: 41 SINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKG 100
+I ++ L + + ++ E ++ + D + L SS H I+VW+ +C+ KG
Sbjct: 987 AIKVLRLLDGRVLTSREAYRTSVQHCRFTTDCQTLISSAHDAVIQVWNWQLNECV-FLKG 1045
Query: 101 HDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSL 160
H A + LL+ + D V VW++ G F H+G V S PD +
Sbjct: 1046 HKEAIKDFAFLENSKLLSWS-FDGTVKVWNITTGKTEKDFACHRGAVLSCAVSPDGSR-- 1102
Query: 161 LFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKV-VNLWDL 217
S S D T ++W + + L H + V A S + L++ G DK + +WD+
Sbjct: 1103 FSSTSADKTAKIWSFESSSVLHELKGHEACVRCSAF-SPSNKLLATGDDKGDIRIWDI 1159
Score = 143 (55.4 bits), Expect = 5.8e-25, Sum P(3) = 5.8e-25
Identities = 35/137 (25%), Positives = 59/137 (43%)
Query: 511 TGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSC 570
+ + D VW L V +GHK I F + +++ S D T+K+W+I+ G
Sbjct: 1023 SSAHDAVIQVWNW-QLNECVFLKGHKEAIKDFAFLE-NSKLLSWSFDGTVKVWNITTGKT 1080
Query: 571 LKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGK 630
K F H +VL + G++ S AD K+W+ + + HE + A
Sbjct: 1081 EKDFACHRGAVLSCAVSPDGSRFSSTSADKTAKIWSFESSSVLHELKGHEACVRCSAFSP 1140
Query: 631 KTEMFATGGSDALVNLW 647
++ ATG + +W
Sbjct: 1141 SNKLLATGDDKGDIRIW 1157
Score = 136 (52.9 bits), Expect = 3.8e-06, Sum P(2) = 3.8e-06
Identities = 73/337 (21%), Positives = 126/337 (37%)
Query: 319 LLCVT--ADQQLLLYTTVEVPEKKMELILSKRLVGYNE---EILDLKFLGEEEQYL-AVA 372
+LC T AD + + + + K K L Y E ++ +F QYL A
Sbjct: 660 ILCCTFSADDKYVATCSADKKVKIWNSRTGKCLYVYEEHTEQVNCCQFNNRRGQYLLATC 719
Query: 373 TNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRC 432
++ ++++DL C + GH V + C S I + S D +V+LW+ S
Sbjct: 720 SDDTYIKLWDLKDKYCRNTMFGH---VNAVSHCRFSPNDDYIASCSTDGTVKLWNVHSAN 776
Query: 433 ---CVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAV 489
+ + A + L S TI V + + L NL + +
Sbjct: 777 ELRTIEIKDFFRNADEQQDDVEVLVKCCSWSRSSDTILVVAKNKLLLFDVTTSNLLTQVI 836
Query: 490 VAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQ 549
++ H I D LV + +W + L V RGH + V FS
Sbjct: 837 ISHHST-IQYCDFCAGDELVAVALSHCSIELWNIKSLSKVADCRGHTSWVHCVTFSSDGS 895
Query: 550 VVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRT 609
+ +T+S D+TI+IW ++ C K+ + S L F I++ ++L T
Sbjct: 896 LFLTSSEDQTIRIWE-TNKVC-KSSDAVLKSELDVVFHNGEVMILAIYNQKHIQLINGNT 953
Query: 610 GECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNL 646
I + E I + + + A G + + +
Sbjct: 954 DSIIMQTEPQESLICCCCLSEDLKFAAFGQENGAIKV 990
Score = 133 (51.9 bits), Expect = 9.8e-05, P = 9.8e-05
Identities = 49/201 (24%), Positives = 74/201 (36%)
Query: 42 INIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGH 101
I +++ + SI E I LS D K + I+V L + L S + +
Sbjct: 946 IQLINGNTDSIIMQTEPQESLICCCCLSEDLKFAAFGQENGAIKVLRLLDGRVLTSREAY 1005
Query: 102 DGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLL 161
L ++ D + VW+ C + KGHK + F + S L
Sbjct: 1006 RTSVQHCRFTTDCQTLISSAHDAVIQVWNWQLNECV-FLKGHKEAIKDFAF---LENSKL 1061
Query: 162 FSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYS 221
S S D TV+VW++ K H V S A++ DGS S DK +W S
Sbjct: 1062 LSWSFDGTVKVWNITTGKTEKDFACHRGAVLSCAVSPDGSRFSSTSADKTAKIWSFESSS 1121
Query: 222 CKLTVPTYEMVEAVCAIPPGS 242
+ +E A P +
Sbjct: 1122 VLHELKGHEACVRCSAFSPSN 1142
Score = 116 (45.9 bits), Expect = 1.7e-22, Sum P(3) = 1.7e-22
Identities = 38/146 (26%), Positives = 67/146 (45%)
Query: 117 LATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLL 176
+A+ GAD+ + V+ + G H + F D DK + + S D V++W+
Sbjct: 630 IASCGADKTLQVFKAESGERLLEISAHDDEILCCTFSAD-DKYVA-TCSADKKVKIWNSR 687
Query: 177 AKKCVATLDKHFSRVTSMAITSD-GSTLISA-GRDKVVNLWDLRDYSCKLTVPTYEMVEA 234
KC+ ++H +V + G L++ D + LWDL+D C+ T+ + V A
Sbjct: 688 TGKCLYVYEEHTEQVNCCQFNNRRGQYLLATCSDDTYIKLWDLKDKYCRNTM--FGHVNA 745
Query: 235 V--CAIPPGSAFDSFLSSYNQQ-TIK 257
V C P D +++S + T+K
Sbjct: 746 VSHCRFSPN---DDYIASCSTDGTVK 768
Score = 106 (42.4 bits), Expect = 1.1e-28, Sum P(3) = 1.1e-28
Identities = 38/163 (23%), Positives = 77/163 (47%)
Query: 274 GIVRMWNADSACLYEQKSSDVTISFEMDDSKRGFTAATVL----PSNQGLLCVTADQQLL 329
G V++WN SA E ++ ++ F D ++ V + + V A +LL
Sbjct: 765 GTVKLWNVHSA--NELRTIEIKDFFRNADEQQDDVEVLVKCCSWSRSSDTILVVAKNKLL 822
Query: 330 LYTTVEVPEKKMELILSKRLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCS 389
L+ +V + L++ ++ ++ I F +E +AVA + ++++++ S+S
Sbjct: 823 LF---DVTTSNL---LTQVIISHHSTIQYCDFCAGDE-LVAVALSHCSIELWNIKSLSKV 875
Query: 390 YVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRC 432
GH+ V C+ SS L +T S+D ++R+W++ C
Sbjct: 876 ADCRGHTSWVHCV---TFSSDGSLFLTSSEDQTIRIWETNKVC 915
Score = 92 (37.4 bits), Expect = 6.2e-14, Sum P(2) = 6.2e-14
Identities = 37/184 (20%), Positives = 81/184 (44%)
Query: 41 SINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKG 100
SI + ++ + S + G + + + S D L +S + IR+W+ T K +S
Sbjct: 863 SIELWNIKSLSKVADCRGHTSWVHCVTFSSDGSLFLTSSEDQTIRIWE--TNKVCKSSDA 920
Query: 101 HDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGH--KGVVSSILFHPDTDK 158
+ + H +G ++ A ++K + ++G + + + ++ D K
Sbjct: 921 VLKSELDVVFH-NGEVMILAIYNQKHIQL-INGNTDSIIMQTEPQESLICCCCLSEDL-K 977
Query: 159 SLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLR 218
F G ++ ++V LL + + + + + + V T+D TLIS+ D V+ +W+ +
Sbjct: 978 FAAF-GQENGAIKVLRLLDGRVLTSREAYRTSVQHCRFTTDCQTLISSAHDAVIQVWNWQ 1036
Query: 219 DYSC 222
C
Sbjct: 1037 LNEC 1040
Score = 66 (28.3 bits), Expect = 6.4e-11, Sum P(2) = 6.4e-11
Identities = 45/254 (17%), Positives = 101/254 (39%)
Query: 398 IVLCLDTCALSSGKILIVTGSKDNSVRLWD-SESRCCVGVGTGHMGAVGAVAFSKKLQNF 456
+V C + + SS IL+V N + L+D + S V H + F +
Sbjct: 800 LVKCC-SWSRSSDTILVVA---KNKLLLFDVTTSNLLTQVIISHHSTIQYCDFCAGDE-- 853
Query: 457 LVSGSSDH-TIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQD 515
LV+ + H +I++W+ LS A+ H ++ + + + SL T S+D
Sbjct: 854 LVAVALSHCSIELWNIKSLSKVAD----------CRGHTSWVHCVTFSSDGSLFLTSSED 903
Query: 516 RTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFE 575
+T +W + + + V F + +++ K I++ + + S + E
Sbjct: 904 QTIRIWETNKVCK--SSDAVLKSELDVVFHNGEVMILAIYNQKHIQLINGNTDSIIMQTE 961
Query: 576 GHTSSVLRASFLTRGAQIVSCGAD-GLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEM 634
S++ L+ + + G + G +K+ + G + + + + + +
Sbjct: 962 PQ-ESLICCCCLSEDLKFAAFGQENGAIKVLRLLDGRVLTSREAYRTSVQHCRFTTDCQT 1020
Query: 635 FATGGSDALVNLWH 648
+ DA++ +W+
Sbjct: 1021 LISSAHDAVIQVWN 1034
Score = 61 (26.5 bits), Expect = 7.4e-17, Sum P(3) = 7.4e-17
Identities = 16/80 (20%), Positives = 33/80 (41%)
Query: 143 HKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGST 202
H+ V F D+ + S D T++V+ + + + + H + ++D
Sbjct: 614 HRDAVYHACF--SRDRQRIASCGADKTLQVFKAESGERLLEISAHDDEILCCTFSADDKY 671
Query: 203 LISAGRDKVVNLWDLRDYSC 222
+ + DK V +W+ R C
Sbjct: 672 VATCSADKKVKIWNSRTGKC 691
Score = 61 (26.5 bits), Expect = 1.0e-10, Sum P(2) = 1.0e-10
Identities = 12/62 (19%), Positives = 28/62 (45%)
Query: 71 DDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWD 130
D+ + + H I +W++ +L + +GH + G L T+ D+ + +W+
Sbjct: 852 DELVAVALSHC-SIELWNIKSLSKVADCRGHTSWVHCVTFSSDGSLFLTSSEDQTIRIWE 910
Query: 131 VD 132
+
Sbjct: 911 TN 912
Score = 58 (25.5 bits), Expect = 9.7e-24, Sum P(3) = 9.7e-24
Identities = 12/35 (34%), Positives = 18/35 (51%)
Query: 267 FITVGERGIVRMWNADSACLYEQKSSDVTISFEMD 301
F+T E +R+W + C KSSD + E+D
Sbjct: 897 FLTSSEDQTIRIWETNKVC----KSSDAVLKSELD 927
>RGD|1561436 [details] [associations]
symbol:LOC363267 "hypothetical protein LOC363267" species:10116
"Rattus norvegicus" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1561436 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 HOGENOM:HOG000253909 HOVERGEN:HBG103651 OMA:RKCISKL
EMBL:BC091226 IPI:IPI00367113 RefSeq:NP_001020196.1
UniGene:Rn.104466 ProteinModelPortal:Q5BK30 PRIDE:Q5BK30
Ensembl:ENSRNOT00000021813 GeneID:363267 KEGG:rno:363267
UCSC:RGD:1561436 InParanoid:Q5BK30 NextBio:683054
Genevestigator:Q5BK30 Uniprot:Q5BK30
Length = 415
Score = 327 (120.2 bits), Expect = 1.2e-28, P = 1.2e-28
Identities = 76/299 (25%), Positives = 143/299 (47%)
Query: 349 LVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALS 408
L G+ + + F +A + + +++ + C + GH+ ++CL + +
Sbjct: 130 LEGHRNVVYAIAFNNPYGDKIATGSFDKTCKLWSAETGKCYHTFRGHTAEIVCL---SFN 186
Query: 409 SGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKV 468
++ TGS D + +LWD +S V TGH+ + +++F +++GS DHT+ V
Sbjct: 187 PQSTVVATGSMDTTAKLWDIQSGEEVVTLTGHLAEIISLSFDTSGDR-IITGSFDHTVVV 245
Query: 469 WSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVS 528
W DA K ++ H +I+S + + SL+ TGS D+T +W
Sbjct: 246 W-------DAST--GRKVHTLIG-HCAEISSALFSWDCSLILTGSMDKTCMLWDATSGKC 295
Query: 529 VVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLT 588
V T GH I F +++ TAS D T ++++ + C+ EGH + + SF
Sbjct: 296 VATLTGHDDEILDSCFDYTGKLIATASADGTARVYNATTRKCITKLEGHEGEISKISFNP 355
Query: 589 RGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLW 647
+G ++++ +D ++W V+TG+C+ + H D+I++ A K + TG D +W
Sbjct: 356 QGNRLLTGSSDKTARIWDVQTGQCLQVLEGHTDEIFSCAFNYKGNIVITGSKDNSCRIW 414
Score = 290 (107.1 bits), Expect = 2.6e-23, P = 2.6e-23
Identities = 78/261 (29%), Positives = 120/261 (45%)
Query: 391 VLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFS 450
VL H +L L AL+ +TGS D + ++WD+ S + GH V A+AF+
Sbjct: 87 VLRAH---ILPLTNVALNKAGSCFITGSYDRTCKVWDTASGEELHTLEGHRNVVYAIAFN 143
Query: 451 KKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVC 510
+ + +GS D T K+WS AE K H +I L+ P ++V
Sbjct: 144 NPYGDKIATGSFDKTCKLWS-------AETG---KCYHTFRGHTAEIVCLSFNPQSTVVA 193
Query: 511 TGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSC 570
TGS D TA +W + VVT GH I S+ F +IT S D T+ +W S G
Sbjct: 194 TGSMDTTAKLWDIQSGEEVVTLTGHLAEIISLSFDTSGDRIITGSFDHTVVVWDASTGRK 253
Query: 571 LKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGK 630
+ T GH + + A F + I++ D LW +G+C+AT H+D+I
Sbjct: 254 VHTLIGHCAEISSALFSWDCSLILTGSMDKTCMLWDATSGKCVATLTGHDDEILDSCFDY 313
Query: 631 KTEMFATGGSDALVNLWHDST 651
++ AT +D +++ +T
Sbjct: 314 TGKLIATASADGTARVYNATT 334
Score = 289 (106.8 bits), Expect = 3.6e-23, P = 3.6e-23
Identities = 77/273 (28%), Positives = 120/273 (43%)
Query: 379 QVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVGT 438
+V+D +S + L GH +V + KI TGS D + +LW +E+ C
Sbjct: 117 KVWDTASGEELHTLEGHRNVVYAIAFNNPYGDKI--ATGSFDKTCKLWSAETGKCYHTFR 174
Query: 439 GHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDIN 498
GH + ++F+ + + +GS D T K+W E+ + L H +I
Sbjct: 175 GHTAEIVCLSFNPQ-STVVATGSMDTTAKLWDIQS----GEEVVTL------TGHLAEII 223
Query: 499 SLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDK 558
SL+ + + TGS D T VW V T GH I S FS +++T S DK
Sbjct: 224 SLSFDTSGDRIITGSFDHTVVVWDASTGRKVHTLIGHCAEISSALFSWDCSLILTGSMDK 283
Query: 559 TIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDK 618
T +W + G C+ T GH +L + F G I + ADG +++ T +CI +
Sbjct: 284 TCMLWDATSGKCVATLTGHDDEILDSCFDYTGKLIATASADGTARVYNATTRKCITKLEG 343
Query: 619 HEDKIWALAVGKKTEMFATGGSDALVNLWHDST 651
HE +I ++ + TG SD +W T
Sbjct: 344 HEGEISKISFNPQGNRLLTGSSDKTARIWDVQT 376
Score = 237 (88.5 bits), Expect = 5.9e-17, P = 5.9e-17
Identities = 91/424 (21%), Positives = 186/424 (43%)
Query: 15 VLQQFYGGGPLVVSSDGSFIACACGESINIVDLSNASIKSTIEGGSDTITALALSPDDKL 74
+L ++Y G ++ G + +SI++++LS ++ +T+ G + L + K
Sbjct: 6 LLLRYYPPGIMLEYEKGGELKT---KSIDLLELSPSTDVNTLVGEIQKVEPLITASRTKQ 62
Query: 75 --LFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVD 132
L ++R + + H P +A + +G T DR VWD
Sbjct: 63 VRLLVQRLQEKLRQHCDHNFYLFKVLRAHILPLTNVALNKAGSCFITGSYDRTCKVWDTA 122
Query: 133 GGFCTHYFKGHKGVVSSILFH-PDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRV 191
G H +GH+ VV +I F+ P DK + +GS D T ++W KC T H + +
Sbjct: 123 SGEELHTLEGHRNVVYAIAFNNPYGDK--IATGSFDKTCKLWSAETGKCYHTFRGHTAEI 180
Query: 192 TSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYEMVEAVCAIPPGSAFDSFLSSY 251
++ + + + D LWD++ +T+ T + E + ++ ++ D ++
Sbjct: 181 VCLSFNPQSTVVATGSMDTTAKLWDIQSGEEVVTL-TGHLAEII-SLSFDTSGDRIITGS 238
Query: 252 NQQTIKKKRRSL--EIHFITVGERGIVR--MWNADSACLYEQKSSDVTISFEMDDSKRGF 307
T+ S ++H + +G + +++ D + + S D T + D+ G
Sbjct: 239 FDHTVVVWDASTGRKVHTL-IGHCAEISSALFSWDCSLILTG-SMDKTCM--LWDATSGK 294
Query: 308 TAATVLPSNQGLL--CVTADQQLLLYTTVEVPEKKMELILSK---RLVGYNEEILDLKFL 362
AT+ + +L C +L+ + + + K +L G+ EI + F
Sbjct: 295 CVATLTGHDDEILDSCFDYTGKLIATASADGTARVYNATTRKCITKLEGHEGEISKISFN 354
Query: 363 GEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNS 422
+ + L +++ + +++D+ + C VL GH++ + +CA + +++TGSKDNS
Sbjct: 355 PQGNRLLTGSSD-KTARIWDVQTGQCLQVLEGHTDEIF---SCAFNYKGNIVITGSKDNS 410
Query: 423 VRLW 426
R+W
Sbjct: 411 CRIW 414
Score = 178 (67.7 bits), Expect = 2.4e-10, P = 2.4e-10
Identities = 51/174 (29%), Positives = 89/174 (51%)
Query: 349 LVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALS 408
L+G+ EI F + L + + + ++D +S C L GH + +L D+C
Sbjct: 257 LIGHCAEISSALFSWDCSLILTGSMD-KTCMLWDATSGKCVATLTGHDDEIL--DSCFDY 313
Query: 409 SGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKV 468
+GK LI T S D + R++++ +R C+ GH G + ++F+ + N L++GSSD T ++
Sbjct: 314 TGK-LIATASADGTARVYNATTRKCITKLEGHEGEISKISFNPQ-GNRLLTGSSDKTARI 371
Query: 469 WSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWR 522
W D + L+ V+ H +I S A ++V TGS+D + +WR
Sbjct: 372 W-------DVQTGQCLQ---VLEGHTDEIFSCAFNYKGNIVITGSKDNSCRIWR 415
>UNIPROTKB|Q8N136 [details] [associations]
symbol:WDR69 "Outer row dynein assembly protein 16 homolog"
species:9606 "Homo sapiens" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:AC073065 CTD:164781 HOGENOM:HOG000253909
HOVERGEN:HBG103651 EMBL:AK097409 EMBL:AK098821 EMBL:AK127882
EMBL:BC036377 IPI:IPI00166063 IPI:IPI00444233 RefSeq:NP_849143.1
UniGene:Hs.424594 ProteinModelPortal:Q8N136 SMR:Q8N136
PhosphoSite:Q8N136 DMDM:74759762 PRIDE:Q8N136
Ensembl:ENST00000309931 GeneID:164781 KEGG:hsa:164781
UCSC:uc002vpn.1 GeneCards:GC02P228735 HGNC:HGNC:26383 HPA:HPA046118
neXtProt:NX_Q8N136 PharmGKB:PA142670602 InParanoid:Q8N136
OMA:RKCISKL PhylomeDB:Q8N136 GenomeRNAi:164781 NextBio:88498
ArrayExpress:Q8N136 Bgee:Q8N136 CleanEx:HS_WDR69
Genevestigator:Q8N136 GermOnline:ENSG00000123977 Uniprot:Q8N136
Length = 415
Score = 323 (118.8 bits), Expect = 3.3e-28, P = 3.3e-28
Identities = 76/299 (25%), Positives = 144/299 (48%)
Query: 349 LVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALS 408
L G+ + + F +A + + +++ + + C + GH+ ++CL + +
Sbjct: 130 LEGHRNVVYAIAFNNPYGDKIATGSFDKTCKLWSVETGKCYHTFRGHTAEIVCL---SFN 186
Query: 409 SGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKV 468
L+ TGS D + +LWD ++ V GH + +++F+ +++GS DHT+ V
Sbjct: 187 PQSTLVATGSMDTTAKLWDIQNGEEVYTLRGHSAEIISLSFNTSGDR-IITGSFDHTVVV 245
Query: 469 WSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVS 528
W D D + +N ++ H +I+S + + SL+ TGS D+T +W +
Sbjct: 246 W--DA---DTGRKVN-----ILIGHCAEISSASFNWDCSLILTGSMDKTCKLWDATNGKC 295
Query: 529 VVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLT 588
V T GH I F +++ TAS D T +I+S + C+ EGH + + SF
Sbjct: 296 VATLTGHDDEILDSCFDYTGKLIATASADGTARIFSAATRKCIAKLEGHEGEISKISFNP 355
Query: 589 RGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLW 647
+G +++ +D ++W +TG+C+ + H D+I++ A K + TG D +W
Sbjct: 356 QGNHLLTGSSDKTARIWDAQTGQCLQVLEGHTDEIFSCAFNYKGNIVITGSKDNTCRIW 414
Score = 300 (110.7 bits), Expect = 8.2e-25, P = 8.2e-25
Identities = 78/261 (29%), Positives = 119/261 (45%)
Query: 391 VLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFS 450
VL H +L L AL+ +TGS D + +LWD+ S + GH V A+AF+
Sbjct: 87 VLKAH---ILPLTNVALNKSGSCFITGSYDRTCKLWDTASGEELNTLEGHRNVVYAIAFN 143
Query: 451 KKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVC 510
+ + +GS D T K+WS + K H +I L+ P +LV
Sbjct: 144 NPYGDKIATGSFDKTCKLWSVE----------TGKCYHTFRGHTAEIVCLSFNPQSTLVA 193
Query: 511 TGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSC 570
TGS D TA +W + + V T RGH I S+ F+ +IT S D T+ +W G
Sbjct: 194 TGSMDTTAKLWDIQNGEEVYTLRGHSAEIISLSFNTSGDRIITGSFDHTVVVWDADTGRK 253
Query: 571 LKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGK 630
+ GH + + ASF + I++ D KLW G+C+AT H+D+I
Sbjct: 254 VNILIGHCAEISSASFNWDCSLILTGSMDKTCKLWDATNGKCVATLTGHDDEILDSCFDY 313
Query: 631 KTEMFATGGSDALVNLWHDST 651
++ AT +D ++ +T
Sbjct: 314 TGKLIATASADGTARIFSAAT 334
Score = 291 (107.5 bits), Expect = 1.9e-23, P = 1.9e-23
Identities = 76/273 (27%), Positives = 122/273 (44%)
Query: 379 QVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVGT 438
+++D +S L GH +V + KI TGS D + +LW E+ C
Sbjct: 117 KLWDTASGEELNTLEGHRNVVYAIAFNNPYGDKI--ATGSFDKTCKLWSVETGKCYHTFR 174
Query: 439 GHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDIN 498
GH + ++F+ + + +GS D T K+W + E+ L+ H +I
Sbjct: 175 GHTAEIVCLSFNPQ-STLVATGSMDTTAKLWDIQ----NGEEVYTLRG------HSAEII 223
Query: 499 SLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDK 558
SL+ + + TGS D T VW V GH I S F+ +++T S DK
Sbjct: 224 SLSFNTSGDRIITGSFDHTVVVWDADTGRKVNILIGHCAEISSASFNWDCSLILTGSMDK 283
Query: 559 TIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDK 618
T K+W ++G C+ T GH +L + F G I + ADG ++++ T +CIA +
Sbjct: 284 TCKLWDATNGKCVATLTGHDDEILDSCFDYTGKLIATASADGTARIFSAATRKCIAKLEG 343
Query: 619 HEDKIWALAVGKKTEMFATGGSDALVNLWHDST 651
HE +I ++ + TG SD +W T
Sbjct: 344 HEGEISKISFNPQGNHLLTGSSDKTARIWDAQT 376
Score = 232 (86.7 bits), Expect = 2.2e-16, P = 2.2e-16
Identities = 54/209 (25%), Positives = 103/209 (49%)
Query: 25 LVVSSDGS-FIACACGESINIVDLSNASIKSTIEGGSDTITALALS-P-DDKLLFSSGHS 81
+ ++ GS FI + + + D ++ +T+EG + + A+A + P DK+ S
Sbjct: 98 VALNKSGSCFITGSYDRTCKLWDTASGEELNTLEGHRNVVYAIAFNNPYGDKIATGS-FD 156
Query: 82 REIRVWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFK 141
+ ++W + T KC +++GH + ++ +P L+AT D +WD+ G + +
Sbjct: 157 KTCKLWSVETGKCYHTFRGHTAEIVCLSFNPQSTLVATGSMDTTAKLWDIQNGEEVYTLR 216
Query: 142 GHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGS 201
GH + S+ F+ D+ + +GS D TV VWD + V L H + ++S + D S
Sbjct: 217 GHSAEIISLSFNTSGDR--IITGSFDHTVVVWDADTGRKVNILIGHCAEISSASFNWDCS 274
Query: 202 TLISAGRDKVVNLWDLRDYSCKLTVPTYE 230
+++ DK LWD + C T+ ++
Sbjct: 275 LILTGSMDKTCKLWDATNGKCVATLTGHD 303
Score = 228 (85.3 bits), Expect = 6.1e-16, P = 6.1e-16
Identities = 87/398 (21%), Positives = 173/398 (43%)
Query: 40 ESINIVDLS-NASIKSTIEGGSDTITALALSPDDKL-LFSSGHSREIRVWDLSTLKCLRS 97
+SI+++DL + + + +E L S +++ L ++ T +
Sbjct: 28 KSIDLLDLGPSTDVSALVEEIQKAEPLLTASRTEQVKLLIQRLQEKLGQNSNHTFYLFKV 87
Query: 98 WKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFH-PDT 156
K H P +A + SG T DR +WD G + +GH+ VV +I F+ P
Sbjct: 88 LKAHILPLTNVALNKSGSCFITGSYDRTCKLWDTASGEELNTLEGHRNVVYAIAFNNPYG 147
Query: 157 DKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGR-DKVVNLW 215
DK + +GS D T ++W + KC T H + + ++ STL++ G D LW
Sbjct: 148 DK--IATGSFDKTCKLWSVETGKCYHTFRGHTAEIVCLSFNPQ-STLVATGSMDTTAKLW 204
Query: 216 DLRDYSCKLTVPTYEMVEAVCAIPPGSAFDSFLS-SYNQQTIKKKRRSLEIHFITVGERG 274
D+++ T+ + + ++ ++ D ++ S++ + + I +G
Sbjct: 205 DIQNGEEVYTLRGHSA--EIISLSFNTSGDRIITGSFDHTVVVWDADTGRKVNILIGHCA 262
Query: 275 IVRMWNADSAC-LYEQKSSDVTISFEMDDSKRGFTAATVLPSNQGLL--CVTADQQLLLY 331
+ + + C L S D T ++ D+ G AT+ + +L C +L+
Sbjct: 263 EISSASFNWDCSLILTGSMDKTC--KLWDATNGKCVATLTGHDDEILDSCFDYTGKLIAT 320
Query: 332 TTVEVPEKKMELILSK---RLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSC 388
+ + + K +L G+ EI + F + +L ++ + +++D + C
Sbjct: 321 ASADGTARIFSAATRKCIAKLEGHEGEISKISF-NPQGNHLLTGSSDKTARIWDAQTGQC 379
Query: 389 SYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLW 426
VL GH++ + +CA + +++TGSKDN+ R+W
Sbjct: 380 LQVLEGHTDEIF---SCAFNYKGNIVITGSKDNTCRIW 414
Score = 213 (80.0 bits), Expect = 3.0e-14, P = 3.0e-14
Identities = 50/208 (24%), Positives = 94/208 (45%)
Query: 8 KSYGCEPVLQQFYGGGPLVVSSDGSFIACACGESINIVDLSNASIKSTIEGGSDTITALA 67
+ + E + F G +++ GSF ++ + D + + G I++ +
Sbjct: 216 RGHSAEIISLSFNTSGDRIIT--GSF-----DHTVVVWDADTGRKVNILIGHCAEISSAS 268
Query: 68 LSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVL 127
+ D L+ + + ++WD + KC+ + GHD + +G L+ATA AD
Sbjct: 269 FNWDCSLILTGSMDKTCKLWDATNGKCVATLTGHDDEILDSCFDYTGKLIATASADGTAR 328
Query: 128 VWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKH 187
++ C +GH+G +S I F+P + L +GS D T R+WD +C+ L+ H
Sbjct: 329 IFSAATRKCIAKLEGHEGEISKISFNPQGNH--LLTGSSDKTARIWDAQTGQCLQVLEGH 386
Query: 188 FSRVTSMAITSDGSTLISAGRDKVVNLW 215
+ S A G+ +I+ +D +W
Sbjct: 387 TDEIFSCAFNYKGNIVITGSKDNTCRIW 414
Score = 188 (71.2 bits), Expect = 1.9e-11, P = 1.9e-11
Identities = 52/174 (29%), Positives = 90/174 (51%)
Query: 349 LVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALS 408
L+G+ EI F + L + + + +++D ++ C L GH + +L D+C
Sbjct: 257 LIGHCAEISSASFNWDCSLILTGSMD-KTCKLWDATNGKCVATLTGHDDEIL--DSCFDY 313
Query: 409 SGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKV 468
+GK LI T S D + R++ + +R C+ GH G + ++F+ + N L++GSSD T ++
Sbjct: 314 TGK-LIATASADGTARIFSAATRKCIAKLEGHEGEISKISFNPQ-GNHLLTGSSDKTARI 371
Query: 469 WSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWR 522
W DA+ L+ V+ H +I S A ++V TGS+D T +WR
Sbjct: 372 W-------DAQTGQCLQ---VLEGHTDEIFSCAFNYKGNIVITGSKDNTCRIWR 415
>UNIPROTKB|Q96DI7 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9606 "Homo sapiens" [GO:0005732 "small nucleolar
ribonucleoprotein complex" evidence=NAS] [GO:0000375 "RNA splicing,
via transesterification reactions" evidence=TAS] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IC;TAS] [GO:0071013 "catalytic
step 2 spliceosome" evidence=IDA] [GO:0005682 "U5 snRNP"
evidence=TAS] [GO:0006396 "RNA processing" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0008380 "RNA splicing"
evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] Reactome:REACT_71 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 GO:GO:0005654
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
Reactome:REACT_1675 GO:GO:0005682 GO:GO:0000398 GO:GO:0071013
HOGENOM:HOG000091644 KO:K12857 GO:GO:0005732 EMBL:AL451070
EMBL:AC114495 CTD:9410 HOVERGEN:HBG105197 OrthoDB:EOG4JM7Q0
EMBL:AF090988 EMBL:BC001494 EMBL:AF083383 IPI:IPI00940685
RefSeq:NP_004805.2 UniGene:Hs.33962 ProteinModelPortal:Q96DI7
SMR:Q96DI7 IntAct:Q96DI7 MINT:MINT-1410013 STRING:Q96DI7
PhosphoSite:Q96DI7 DMDM:67462075 PaxDb:Q96DI7 PeptideAtlas:Q96DI7
PRIDE:Q96DI7 DNASU:9410 Ensembl:ENST00000263694 GeneID:9410
KEGG:hsa:9410 UCSC:uc001bso.3 GeneCards:GC01M031732 HGNC:HGNC:30857
HPA:HPA026527 HPA:HPA027345 MIM:607797 neXtProt:NX_Q96DI7
PharmGKB:PA164726132 InParanoid:Q96DI7 PhylomeDB:Q96DI7
ChiTaRS:SNRNP40 GenomeRNAi:9410 NextBio:35252 ArrayExpress:Q96DI7
Bgee:Q96DI7 CleanEx:HS_SNRNP40 Genevestigator:Q96DI7
GermOnline:ENSG00000060688 Uniprot:Q96DI7
Length = 357
Score = 230 (86.0 bits), Expect = 3.3e-28, Sum P(2) = 3.3e-28
Identities = 60/161 (37%), Positives = 78/161 (48%)
Query: 100 GHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHY--FKGHKGVVSSILFHPDTD 157
GH+G HP+G LA+AG DR +L+W+V G C +Y KGH G V + H +TD
Sbjct: 64 GHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGD-CDNYATLKGHSGAVMEL--HYNTD 120
Query: 158 KSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDK-VVNLWD 216
S+LFS S D TV VWD + V L H S V S G L+ G D V LWD
Sbjct: 121 GSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWD 180
Query: 217 LRDYSCKLTVPTYEMVEAVCAIPPGSAFDSFLSSYNQQTIK 257
+R K + T++ V A+ D +S IK
Sbjct: 181 IRK---KAAIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIK 218
Score = 219 (82.2 bits), Expect = 3.3e-15, P = 3.3e-15
Identities = 71/271 (26%), Positives = 113/271 (41%)
Query: 391 VLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCC-VGVGTGHMGAVGAVAF 449
+L+GH V C C + + D + LW+ C GH GAV + +
Sbjct: 61 LLSGHEGEVYC---CKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHY 117
Query: 450 SKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPND-SL 508
+ + L S S+D T+ VW S+ E+ LK H +NS A L
Sbjct: 118 NTD-GSMLFSASTDKTVAVWD----SETGERVKRLKG------HTSFVNSCYPARRGPQL 166
Query: 509 VCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDG 568
VCTGS D T +W + ++ TF+ + + +V F+ +I+ D IK+W +
Sbjct: 167 VCTGSDDGTVKLWDIRKKAAIQTFQNTYQ-VLAVTFNDTSDQIISGGIDNDIKVWDLRQN 225
Query: 569 SCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRT----GECIATY--DKH--E 620
T GH SV S + G+ ++S D V++W VR C+ + + H E
Sbjct: 226 KLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFE 285
Query: 621 DKIWALAVGKKTEMFATGGSDALVNLWHDST 651
+ + A G +D V +W D+T
Sbjct: 286 KNLLRCSWSPDGSKIAAGSADRFVYVW-DTT 315
Score = 215 (80.7 bits), Expect = 9.5e-15, P = 9.5e-15
Identities = 51/173 (29%), Positives = 91/173 (52%)
Query: 54 STIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPS 113
+T++G S + L + D +LFS+ + + VWD T + ++ KGH + +C+P+
Sbjct: 103 ATLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHT--SFVNSCYPA 160
Query: 114 G-G--LLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATV 170
G L+ T D V +WD+ F+ V++ + F+ +D+ + SG D +
Sbjct: 161 RRGPQLVCTGSDDGTVKLWDIRKKAAIQTFQNTYQVLA-VTFNDTSDQ--IISGGIDNDI 217
Query: 171 RVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCK 223
+VWDL K T+ H VT ++++S+GS L+S D V +WD+R ++ K
Sbjct: 218 KVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPK 270
Score = 183 (69.5 bits), Expect = 4.3e-11, P = 4.3e-11
Identities = 72/304 (23%), Positives = 128/304 (42%)
Query: 349 LVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYV-LAGHSEIVLCLDTCAL 407
L G+ E+ KF LA A + ++++ +Y L GHS V+ L
Sbjct: 62 LSGHEGEVYCCKF-HPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYN-- 118
Query: 408 SSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIK 467
+ G +L + S D +V +WDSE+ V GH V + +++ + +GS D T+K
Sbjct: 119 TDGSMLF-SASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVK 177
Query: 468 VWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSL--VCTGSQDRTACVWRLPD 525
+W +++ KA + LAV ND+ + +G D VW L
Sbjct: 178 LW-------------DIRKKAAIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQ 224
Query: 526 LVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGS----CLKTFEGHT--- 578
T RGH + + S +++ + D T+++W + + C+K F+G+
Sbjct: 225 NKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNF 284
Query: 579 -SSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFAT 637
++LR S+ G++I + AD V +W + + H I +A + +
Sbjct: 285 EKNLLRCSWSPDGSKIAAGSADRFVYVWDTTSRRILYKLPGHAGSINEVAFHPDEPIIIS 344
Query: 638 GGSD 641
SD
Sbjct: 345 ASSD 348
Score = 174 (66.3 bits), Expect = 4.4e-10, P = 4.4e-10
Identities = 43/148 (29%), Positives = 71/148 (47%)
Query: 28 SSDGSFIACACGESINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRVW 87
+SD I+ I + DL + T+ G +D++T L+LS + L S+ +RVW
Sbjct: 204 TSD-QIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVW 262
Query: 88 DLSTL----KCLRSWKG--HDGPAIGMACH--PSGGLLATAGADRKVLVWDVDGGFCTHY 139
D+ +C++ ++G H+ + C P G +A ADR V VWD +
Sbjct: 263 DVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDTTSRRILYK 322
Query: 140 FKGHKGVVSSILFHPDTDKSLLFSGSDD 167
GH G ++ + FHPD + ++ S S D
Sbjct: 323 LPGHAGSINEVAFHPD--EPIIISASSD 348
Score = 166 (63.5 bits), Expect = 3.5e-09, P = 3.5e-09
Identities = 53/198 (26%), Positives = 88/198 (44%)
Query: 31 GSFIACACGESINIVDLSNASIKSTIEGGSDTITALALSPDDKL--LFSSGHSREIRVWD 88
G + C G V L + K+ I+ +T LA++ +D + S G +I+VWD
Sbjct: 163 GPQLVCT-GSDDGTVKLWDIRKKAAIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWD 221
Query: 89 LSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDV----DGGFCTHYFKGH- 143
L K + +GH G++ G L + D V VWDV C F+G+
Sbjct: 222 LRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNV 281
Query: 144 KGVVSSIL---FHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDG 200
++L + PD K + +GS D V VWD +++ + L H + +A D
Sbjct: 282 HNFEKNLLRCSWSPDGSK--IAAGSADRFVYVWDTTSRRILYKLPGHAGSINEVAFHPDE 339
Query: 201 STLISAGRDKVVNLWDLR 218
+ISA DK + + +++
Sbjct: 340 PIIISASSDKRLYMGEIQ 357
Score = 151 (58.2 bits), Expect = 3.3e-28, Sum P(2) = 3.3e-28
Identities = 39/152 (25%), Positives = 73/152 (48%)
Query: 414 IVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDG 473
I++G DN +++WD GH +V ++ S + ++L+S + D+T++VW
Sbjct: 208 IISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSE-GSYLLSNAMDNTVRVWDVRP 266
Query: 474 LSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFR 533
+ E+ + + + V K++ + +P+ S + GS DR VW +
Sbjct: 267 FAPK-ERCVKI-FQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDTTSRRILYKLP 324
Query: 534 GHKRGIWSVEFSPVDQVVITASGDKTIKIWSI 565
GH I V F P + ++I+AS DK + + I
Sbjct: 325 GHAGSINEVAFHPDEPIIISASSDKRLYMGEI 356
Score = 141 (54.7 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 30/122 (24%), Positives = 57/122 (46%)
Query: 529 VVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSC--LKTFEGHTSSVLRASF 586
++ GH+ ++ +F P + +A D+ I +W++ G C T +GH+ +V+ +
Sbjct: 59 IMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVY-GDCDNYATLKGHSGAVMELHY 117
Query: 587 LTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKK-TEMFATGGSDALVN 645
T G+ + S D V +W TGE + H + + ++ ++ TG D V
Sbjct: 118 NTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVK 177
Query: 646 LW 647
LW
Sbjct: 178 LW 179
Score = 94 (38.1 bits), Expect = 3.0e-22, Sum P(2) = 3.0e-22
Identities = 34/124 (27%), Positives = 54/124 (43%)
Query: 345 LSKRLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMS----CSYVLAGH-SEIV 399
L+ + G+ + + L L E YL V+V+D+ + C + G+
Sbjct: 227 LTYTMRGHADSVTGLS-LSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFE 285
Query: 400 LCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVS 459
L C+ S I GS D V +WD+ SR + GH G++ VAF + ++S
Sbjct: 286 KNLLRCSWSPDGSKIAAGSADRFVYVWDTTSRRILYKLPGHAGSINEVAFHPD-EPIIIS 344
Query: 460 GSSD 463
SSD
Sbjct: 345 ASSD 348
Score = 60 (26.2 bits), Expect = 2.9e-09, Sum P(2) = 2.9e-09
Identities = 13/37 (35%), Positives = 20/37 (54%)
Query: 181 VATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDL 217
+ L H V +GSTL SAG D+++ LW++
Sbjct: 59 IMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNV 95
>MGI|MGI:1913835 [details] [associations]
symbol:Snrnp40 "small nuclear ribonucleoprotein 40 (U5)"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0005681
"spliceosomal complex" evidence=IEA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1913835 GO:GO:0005737
GO:GO:0008380 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006397 GO:GO:0071013 HOGENOM:HOG000091644 KO:K12857
OMA:HAGSVNE GeneTree:ENSGT00690000101787 CTD:9410
HOVERGEN:HBG105197 OrthoDB:EOG4JM7Q0 EMBL:AK002371 EMBL:AK169605
EMBL:BC058365 IPI:IPI00461621 RefSeq:NP_079921.2 UniGene:Mm.423019
ProteinModelPortal:Q6PE01 SMR:Q6PE01 STRING:Q6PE01
PhosphoSite:Q6PE01 PaxDb:Q6PE01 PRIDE:Q6PE01
Ensembl:ENSMUST00000105994 GeneID:66585 KEGG:mmu:66585
UCSC:uc008uzf.1 InParanoid:Q6PE01 NextBio:322070 Bgee:Q6PE01
Genevestigator:Q6PE01 Uniprot:Q6PE01
Length = 358
Score = 231 (86.4 bits), Expect = 4.0e-28, Sum P(2) = 4.0e-28
Identities = 61/161 (37%), Positives = 78/161 (48%)
Query: 100 GHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHY--FKGHKGVVSSILFHPDTD 157
GH+G HP+G LA+AG DR +L+W+V G C +Y KGH G V + H +TD
Sbjct: 65 GHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGD-CDNYATLKGHSGAVMEL--HYNTD 121
Query: 158 KSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDK-VVNLWD 216
S+LFS S D TV VWD + V L H S V S G L+ G D V LWD
Sbjct: 122 GSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWD 181
Query: 217 LRDYSCKLTVPTYEMVEAVCAIPPGSAFDSFLSSYNQQTIK 257
+R K V T++ V A+ D +S IK
Sbjct: 182 IRK---KAAVQTFQNTYQVLAVTFNDTSDQIISGGIDNDIK 219
Score = 220 (82.5 bits), Expect = 2.5e-15, P = 2.5e-15
Identities = 72/271 (26%), Positives = 113/271 (41%)
Query: 391 VLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCC-VGVGTGHMGAVGAVAF 449
+L+GH V C C + + D + LW+ C GH GAV + +
Sbjct: 62 LLSGHEGEVYC---CKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHY 118
Query: 450 SKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPND-SL 508
+ + L S S+D T+ VW S+ E+ LK H +NS A L
Sbjct: 119 NTD-GSMLFSASTDKTVAVWD----SETGERVKRLKG------HTSFVNSCYPARRGPQL 167
Query: 509 VCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDG 568
VCTGS D T +W + +V TF+ + + +V F+ +I+ D IK+W +
Sbjct: 168 VCTGSDDGTVKLWDIRKKAAVQTFQNTYQ-VLAVTFNDTSDQIISGGIDNDIKVWDLRQN 226
Query: 569 SCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRT----GECIATY--DKH--E 620
T GH SV S + G+ ++S D V++W VR C+ + + H E
Sbjct: 227 KLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFE 286
Query: 621 DKIWALAVGKKTEMFATGGSDALVNLWHDST 651
+ + A G +D V +W D+T
Sbjct: 287 KNLLRCSWSPDGSKIAAGSADRFVYVW-DTT 316
Score = 216 (81.1 bits), Expect = 7.4e-15, P = 7.4e-15
Identities = 51/173 (29%), Positives = 91/173 (52%)
Query: 54 STIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPS 113
+T++G S + L + D +LFS+ + + VWD T + ++ KGH + +C+P+
Sbjct: 104 ATLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHT--SFVNSCYPA 161
Query: 114 G-G--LLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATV 170
G L+ T D V +WD+ F+ V++ + F+ +D+ + SG D +
Sbjct: 162 RRGPQLVCTGSDDGTVKLWDIRKKAAVQTFQNTYQVLA-VTFNDTSDQ--IISGGIDNDI 218
Query: 171 RVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCK 223
+VWDL K T+ H VT ++++S+GS L+S D V +WD+R ++ K
Sbjct: 219 KVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPK 271
Score = 184 (69.8 bits), Expect = 3.4e-11, P = 3.4e-11
Identities = 73/304 (24%), Positives = 128/304 (42%)
Query: 349 LVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYV-LAGHSEIVLCLDTCAL 407
L G+ E+ KF LA A + ++++ +Y L GHS V+ L
Sbjct: 63 LSGHEGEVYCCKF-HPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYN-- 119
Query: 408 SSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIK 467
+ G +L + S D +V +WDSE+ V GH V + +++ + +GS D T+K
Sbjct: 120 TDGSMLF-SASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVK 178
Query: 468 VWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSL--VCTGSQDRTACVWRLPD 525
+W +++ KA V LAV ND+ + +G D VW L
Sbjct: 179 LW-------------DIRKKAAVQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQ 225
Query: 526 LVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGS----CLKTFEGHT--- 578
T RGH + + S +++ + D T+++W + + C+K F+G+
Sbjct: 226 NKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNF 285
Query: 579 -SSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFAT 637
++LR S+ G++I + AD V +W + + H I +A + +
Sbjct: 286 EKNLLRCSWSPDGSKIAAGSADRFVYVWDTTSRRVLYKLPGHAGSINEVAFHPDEPIILS 345
Query: 638 GGSD 641
SD
Sbjct: 346 ASSD 349
Score = 174 (66.3 bits), Expect = 4.5e-10, P = 4.5e-10
Identities = 43/148 (29%), Positives = 71/148 (47%)
Query: 28 SSDGSFIACACGESINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRVW 87
+SD I+ I + DL + T+ G +D++T L+LS + L S+ +RVW
Sbjct: 205 TSD-QIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVW 263
Query: 88 DLSTL----KCLRSWKG--HDGPAIGMACH--PSGGLLATAGADRKVLVWDVDGGFCTHY 139
D+ +C++ ++G H+ + C P G +A ADR V VWD +
Sbjct: 264 DVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDTTSRRVLYK 323
Query: 140 FKGHKGVVSSILFHPDTDKSLLFSGSDD 167
GH G ++ + FHPD + ++ S S D
Sbjct: 324 LPGHAGSINEVAFHPD--EPIILSASSD 349
Score = 163 (62.4 bits), Expect = 7.6e-09, P = 7.6e-09
Identities = 51/198 (25%), Positives = 88/198 (44%)
Query: 31 GSFIACACGESINIVDLSNASIKSTIEGGSDTITALALSPDDKL--LFSSGHSREIRVWD 88
G + C G V L + K+ ++ +T LA++ +D + S G +I+VWD
Sbjct: 164 GPQLVCT-GSDDGTVKLWDIRKKAAVQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWD 222
Query: 89 LSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDV----DGGFCTHYFKGH- 143
L K + +GH G++ G L + D V VWDV C F+G+
Sbjct: 223 LRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNV 282
Query: 144 KGVVSSIL---FHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDG 200
++L + PD K + +GS D V VWD +++ + L H + +A D
Sbjct: 283 HNFEKNLLRCSWSPDGSK--IAAGSADRFVYVWDTTSRRVLYKLPGHAGSINEVAFHPDE 340
Query: 201 STLISAGRDKVVNLWDLR 218
++SA DK + + +++
Sbjct: 341 PIILSASSDKRLYMGEIQ 358
Score = 149 (57.5 bits), Expect = 4.0e-28, Sum P(2) = 4.0e-28
Identities = 38/152 (25%), Positives = 73/152 (48%)
Query: 414 IVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDG 473
I++G DN +++WD GH +V ++ S + ++L+S + D+T++VW
Sbjct: 209 IISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSE-GSYLLSNAMDNTVRVWDVRP 267
Query: 474 LSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFR 533
+ E+ + + + V K++ + +P+ S + GS DR VW +
Sbjct: 268 FAPK-ERCVKI-FQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDTTSRRVLYKLP 325
Query: 534 GHKRGIWSVEFSPVDQVVITASGDKTIKIWSI 565
GH I V F P + ++++AS DK + + I
Sbjct: 326 GHAGSINEVAFHPDEPIILSASSDKRLYMGEI 357
Score = 141 (54.7 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 30/122 (24%), Positives = 57/122 (46%)
Query: 529 VVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSC--LKTFEGHTSSVLRASF 586
++ GH+ ++ +F P + +A D+ I +W++ G C T +GH+ +V+ +
Sbjct: 60 IMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVY-GDCDNYATLKGHSGAVMELHY 118
Query: 587 LTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKK-TEMFATGGSDALVN 645
T G+ + S D V +W TGE + H + + ++ ++ TG D V
Sbjct: 119 NTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVK 178
Query: 646 LW 647
LW
Sbjct: 179 LW 180
>UNIPROTKB|Q2HJH6 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9913 "Bos taurus" [GO:0008380 "RNA splicing"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005681 "spliceosomal complex" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397 GO:GO:0005681
HOGENOM:HOG000091644 KO:K12857 EMBL:BC105383 IPI:IPI00687479
RefSeq:NP_001039847.1 UniGene:Bt.59135 ProteinModelPortal:Q2HJH6
STRING:Q2HJH6 PRIDE:Q2HJH6 GeneID:534645 KEGG:bta:534645 CTD:9410
HOVERGEN:HBG105197 InParanoid:Q2HJH6 OrthoDB:EOG4JM7Q0
NextBio:20876486 Uniprot:Q2HJH6
Length = 358
Score = 230 (86.0 bits), Expect = 5.6e-28, Sum P(2) = 5.6e-28
Identities = 60/161 (37%), Positives = 78/161 (48%)
Query: 100 GHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHY--FKGHKGVVSSILFHPDTD 157
GH+G HP+G LA+AG DR +L+W+V G C +Y KGH G V + H +TD
Sbjct: 65 GHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGD-CDNYATLKGHSGAVMEL--HYNTD 121
Query: 158 KSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDK-VVNLWD 216
S+LFS S D TV VWD + V L H S V S G L+ G D V LWD
Sbjct: 122 GSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWD 181
Query: 217 LRDYSCKLTVPTYEMVEAVCAIPPGSAFDSFLSSYNQQTIK 257
+R K + T++ V A+ D +S IK
Sbjct: 182 IRK---KAAIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIK 219
Score = 219 (82.2 bits), Expect = 3.3e-15, P = 3.3e-15
Identities = 71/271 (26%), Positives = 113/271 (41%)
Query: 391 VLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCC-VGVGTGHMGAVGAVAF 449
+L+GH V C C + + D + LW+ C GH GAV + +
Sbjct: 62 LLSGHEGEVYC---CKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHY 118
Query: 450 SKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPND-SL 508
+ + L S S+D T+ VW S+ E+ LK H +NS A L
Sbjct: 119 NTD-GSMLFSASTDKTVAVWD----SETGERVKRLKG------HTSFVNSCYPARRGPQL 167
Query: 509 VCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDG 568
VCTGS D T +W + ++ TF+ + + +V F+ +I+ D IK+W +
Sbjct: 168 VCTGSDDGTVKLWDIRKKAAIQTFQNTYQ-VLAVTFNDTSDQIISGGIDNDIKVWDLRQN 226
Query: 569 SCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRT----GECIATY--DKH--E 620
T GH SV S + G+ ++S D V++W VR C+ + + H E
Sbjct: 227 KLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVRIFQGNVHNFE 286
Query: 621 DKIWALAVGKKTEMFATGGSDALVNLWHDST 651
+ + A G +D V +W D+T
Sbjct: 287 KNLLRCSWSPDGSKIAAGSADRFVYVW-DTT 316
Score = 215 (80.7 bits), Expect = 9.6e-15, P = 9.6e-15
Identities = 51/173 (29%), Positives = 91/173 (52%)
Query: 54 STIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPS 113
+T++G S + L + D +LFS+ + + VWD T + ++ KGH + +C+P+
Sbjct: 104 ATLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHT--SFVNSCYPA 161
Query: 114 G-G--LLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATV 170
G L+ T D V +WD+ F+ V++ + F+ +D+ + SG D +
Sbjct: 162 RRGPQLVCTGSDDGTVKLWDIRKKAAIQTFQNTYQVLA-VTFNDTSDQ--IISGGIDNDI 218
Query: 171 RVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCK 223
+VWDL K T+ H VT ++++S+GS L+S D V +WD+R ++ K
Sbjct: 219 KVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPK 271
Score = 180 (68.4 bits), Expect = 9.5e-11, P = 9.5e-11
Identities = 71/304 (23%), Positives = 128/304 (42%)
Query: 349 LVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYV-LAGHSEIVLCLDTCAL 407
L G+ E+ KF LA A + ++++ +Y L GHS V+ L
Sbjct: 63 LSGHEGEVYCCKF-HPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYN-- 119
Query: 408 SSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIK 467
+ G +L + S D +V +WDSE+ V GH V + +++ + +GS D T+K
Sbjct: 120 TDGSMLF-SASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVK 178
Query: 468 VWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSL--VCTGSQDRTACVWRLPD 525
+W +++ KA + LAV ND+ + +G D VW L
Sbjct: 179 LW-------------DIRKKAAIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQ 225
Query: 526 LVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGS----CLKTFEGHT--- 578
T RGH + + S +++ + D T+++W + + C++ F+G+
Sbjct: 226 NKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVRIFQGNVHNF 285
Query: 579 -SSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFAT 637
++LR S+ G++I + AD V +W + + H I +A + +
Sbjct: 286 EKNLLRCSWSPDGSKIAAGSADRFVYVWDTTSRRILYKLPGHAGSINEVAFHPDEPIILS 345
Query: 638 GGSD 641
SD
Sbjct: 346 ASSD 349
Score = 177 (67.4 bits), Expect = 2.1e-10, P = 2.1e-10
Identities = 44/148 (29%), Positives = 71/148 (47%)
Query: 28 SSDGSFIACACGESINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRVW 87
+SD I+ I + DL + T+ G +D++T L+LS + L S+ +RVW
Sbjct: 205 TSD-QIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVW 263
Query: 88 DLSTL----KCLRSWKG--HDGPAIGMACH--PSGGLLATAGADRKVLVWDVDGGFCTHY 139
D+ +C+R ++G H+ + C P G +A ADR V VWD +
Sbjct: 264 DVRPFAPKERCVRIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDTTSRRILYK 323
Query: 140 FKGHKGVVSSILFHPDTDKSLLFSGSDD 167
GH G ++ + FHPD + ++ S S D
Sbjct: 324 LPGHAGSINEVAFHPD--EPIILSASSD 349
Score = 165 (63.1 bits), Expect = 4.5e-09, P = 4.5e-09
Identities = 52/198 (26%), Positives = 88/198 (44%)
Query: 31 GSFIACACGESINIVDLSNASIKSTIEGGSDTITALALSPDDKL--LFSSGHSREIRVWD 88
G + C G V L + K+ I+ +T LA++ +D + S G +I+VWD
Sbjct: 164 GPQLVCT-GSDDGTVKLWDIRKKAAIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWD 222
Query: 89 LSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDV----DGGFCTHYFKGH- 143
L K + +GH G++ G L + D V VWDV C F+G+
Sbjct: 223 LRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVRIFQGNV 282
Query: 144 KGVVSSIL---FHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDG 200
++L + PD K + +GS D V VWD +++ + L H + +A D
Sbjct: 283 HNFEKNLLRCSWSPDGSK--IAAGSADRFVYVWDTTSRRILYKLPGHAGSINEVAFHPDE 340
Query: 201 STLISAGRDKVVNLWDLR 218
++SA DK + + +++
Sbjct: 341 PIILSASSDKRLYMGEIQ 358
Score = 149 (57.5 bits), Expect = 5.6e-28, Sum P(2) = 5.6e-28
Identities = 38/152 (25%), Positives = 73/152 (48%)
Query: 414 IVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDG 473
I++G DN +++WD GH +V ++ S + ++L+S + D+T++VW
Sbjct: 209 IISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSE-GSYLLSNAMDNTVRVWDVRP 267
Query: 474 LSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFR 533
+ E+ + + + V K++ + +P+ S + GS DR VW +
Sbjct: 268 FAPK-ERCVRI-FQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDTTSRRILYKLP 325
Query: 534 GHKRGIWSVEFSPVDQVVITASGDKTIKIWSI 565
GH I V F P + ++++AS DK + + I
Sbjct: 326 GHAGSINEVAFHPDEPIILSASSDKRLYMGEI 357
Score = 141 (54.7 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 30/122 (24%), Positives = 57/122 (46%)
Query: 529 VVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSC--LKTFEGHTSSVLRASF 586
++ GH+ ++ +F P + +A D+ I +W++ G C T +GH+ +V+ +
Sbjct: 60 IMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVY-GDCDNYATLKGHSGAVMELHY 118
Query: 587 LTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKK-TEMFATGGSDALVN 645
T G+ + S D V +W TGE + H + + ++ ++ TG D V
Sbjct: 119 NTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVK 178
Query: 646 LW 647
LW
Sbjct: 179 LW 180
Score = 92 (37.4 bits), Expect = 5.1e-22, Sum P(2) = 5.1e-22
Identities = 34/124 (27%), Positives = 54/124 (43%)
Query: 345 LSKRLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMS----CSYVLAGH-SEIV 399
L+ + G+ + + L L E YL V+V+D+ + C + G+
Sbjct: 228 LTYTMRGHADSVTGLS-LSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVRIFQGNVHNFE 286
Query: 400 LCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVS 459
L C+ S I GS D V +WD+ SR + GH G++ VAF + ++S
Sbjct: 287 KNLLRCSWSPDGSKIAAGSADRFVYVWDTTSRRILYKLPGHAGSINEVAFHPD-EPIILS 345
Query: 460 GSSD 463
SSD
Sbjct: 346 ASSD 349
Score = 60 (26.2 bits), Expect = 5.0e-09, Sum P(2) = 5.0e-09
Identities = 13/37 (35%), Positives = 20/37 (54%)
Query: 181 VATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDL 217
+ L H V +GSTL SAG D+++ LW++
Sbjct: 60 IMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNV 96
>UNIPROTKB|F1MLP7 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9913 "Bos taurus" [GO:0071013 "catalytic step 2
spliceosome" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013
OMA:HAGSVNE GeneTree:ENSGT00690000101787 IPI:IPI00687479
UniGene:Bt.59135 EMBL:DAAA02006263 ProteinModelPortal:F1MLP7
Ensembl:ENSBTAT00000022372 Uniprot:F1MLP7
Length = 358
Score = 230 (86.0 bits), Expect = 5.6e-28, Sum P(2) = 5.6e-28
Identities = 60/161 (37%), Positives = 78/161 (48%)
Query: 100 GHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHY--FKGHKGVVSSILFHPDTD 157
GH+G HP+G LA+AG DR +L+W+V G C +Y KGH G V + H +TD
Sbjct: 65 GHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGD-CDNYATLKGHSGAVMEL--HYNTD 121
Query: 158 KSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDK-VVNLWD 216
S+LFS S D TV VWD + V L H S V S G L+ G D V LWD
Sbjct: 122 GSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWD 181
Query: 217 LRDYSCKLTVPTYEMVEAVCAIPPGSAFDSFLSSYNQQTIK 257
+R K + T++ V A+ D +S IK
Sbjct: 182 IRK---KAAIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIK 219
Score = 219 (82.2 bits), Expect = 3.3e-15, P = 3.3e-15
Identities = 71/271 (26%), Positives = 113/271 (41%)
Query: 391 VLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCC-VGVGTGHMGAVGAVAF 449
+L+GH V C C + + D + LW+ C GH GAV + +
Sbjct: 62 LLSGHEGEVYC---CKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHY 118
Query: 450 SKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPND-SL 508
+ + L S S+D T+ VW S+ E+ LK H +NS A L
Sbjct: 119 NTD-GSMLFSASTDKTVAVWD----SETGERVKRLKG------HTSFVNSCYPARRGPQL 167
Query: 509 VCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDG 568
VCTGS D T +W + ++ TF+ + + +V F+ +I+ D IK+W +
Sbjct: 168 VCTGSDDGTVKLWDIRKKAAIQTFQNTYQ-VLAVTFNDTSDQIISGGIDNDIKVWDLRQN 226
Query: 569 SCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRT----GECIATY--DKH--E 620
T GH SV S + G+ ++S D V++W VR C+ + + H E
Sbjct: 227 KLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFE 286
Query: 621 DKIWALAVGKKTEMFATGGSDALVNLWHDST 651
+ + A G +D V +W D+T
Sbjct: 287 KNLLRCSWSPDGSKIAAGSADRFVYVW-DTT 316
Score = 215 (80.7 bits), Expect = 9.6e-15, P = 9.6e-15
Identities = 51/173 (29%), Positives = 91/173 (52%)
Query: 54 STIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPS 113
+T++G S + L + D +LFS+ + + VWD T + ++ KGH + +C+P+
Sbjct: 104 ATLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHT--SFVNSCYPA 161
Query: 114 G-G--LLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATV 170
G L+ T D V +WD+ F+ V++ + F+ +D+ + SG D +
Sbjct: 162 RRGPQLVCTGSDDGTVKLWDIRKKAAIQTFQNTYQVLA-VTFNDTSDQ--IISGGIDNDI 218
Query: 171 RVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCK 223
+VWDL K T+ H VT ++++S+GS L+S D V +WD+R ++ K
Sbjct: 219 KVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPK 271
Score = 183 (69.5 bits), Expect = 4.3e-11, P = 4.3e-11
Identities = 72/304 (23%), Positives = 128/304 (42%)
Query: 349 LVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYV-LAGHSEIVLCLDTCAL 407
L G+ E+ KF LA A + ++++ +Y L GHS V+ L
Sbjct: 63 LSGHEGEVYCCKF-HPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYN-- 119
Query: 408 SSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIK 467
+ G +L + S D +V +WDSE+ V GH V + +++ + +GS D T+K
Sbjct: 120 TDGSMLF-SASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVK 178
Query: 468 VWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSL--VCTGSQDRTACVWRLPD 525
+W +++ KA + LAV ND+ + +G D VW L
Sbjct: 179 LW-------------DIRKKAAIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQ 225
Query: 526 LVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGS----CLKTFEGHT--- 578
T RGH + + S +++ + D T+++W + + C+K F+G+
Sbjct: 226 NKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNF 285
Query: 579 -SSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFAT 637
++LR S+ G++I + AD V +W + + H I +A + +
Sbjct: 286 EKNLLRCSWSPDGSKIAAGSADRFVYVWDTTSRRILYKLPGHAGSINEVAFHPDEPIILS 345
Query: 638 GGSD 641
SD
Sbjct: 346 ASSD 349
Score = 174 (66.3 bits), Expect = 4.5e-10, P = 4.5e-10
Identities = 43/148 (29%), Positives = 71/148 (47%)
Query: 28 SSDGSFIACACGESINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRVW 87
+SD I+ I + DL + T+ G +D++T L+LS + L S+ +RVW
Sbjct: 205 TSD-QIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVW 263
Query: 88 DLSTL----KCLRSWKG--HDGPAIGMACH--PSGGLLATAGADRKVLVWDVDGGFCTHY 139
D+ +C++ ++G H+ + C P G +A ADR V VWD +
Sbjct: 264 DVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDTTSRRILYK 323
Query: 140 FKGHKGVVSSILFHPDTDKSLLFSGSDD 167
GH G ++ + FHPD + ++ S S D
Sbjct: 324 LPGHAGSINEVAFHPD--EPIILSASSD 349
Score = 164 (62.8 bits), Expect = 5.9e-09, P = 5.9e-09
Identities = 52/198 (26%), Positives = 88/198 (44%)
Query: 31 GSFIACACGESINIVDLSNASIKSTIEGGSDTITALALSPDDKL--LFSSGHSREIRVWD 88
G + C G V L + K+ I+ +T LA++ +D + S G +I+VWD
Sbjct: 164 GPQLVCT-GSDDGTVKLWDIRKKAAIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWD 222
Query: 89 LSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDV----DGGFCTHYFKGH- 143
L K + +GH G++ G L + D V VWDV C F+G+
Sbjct: 223 LRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNV 282
Query: 144 KGVVSSIL---FHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDG 200
++L + PD K + +GS D V VWD +++ + L H + +A D
Sbjct: 283 HNFEKNLLRCSWSPDGSK--IAAGSADRFVYVWDTTSRRILYKLPGHAGSINEVAFHPDE 340
Query: 201 STLISAGRDKVVNLWDLR 218
++SA DK + + +++
Sbjct: 341 PIILSASSDKRLYMGEIQ 358
Score = 149 (57.5 bits), Expect = 5.6e-28, Sum P(2) = 5.6e-28
Identities = 38/152 (25%), Positives = 73/152 (48%)
Query: 414 IVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDG 473
I++G DN +++WD GH +V ++ S + ++L+S + D+T++VW
Sbjct: 209 IISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSE-GSYLLSNAMDNTVRVWDVRP 267
Query: 474 LSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFR 533
+ E+ + + + V K++ + +P+ S + GS DR VW +
Sbjct: 268 FAPK-ERCVKI-FQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDTTSRRILYKLP 325
Query: 534 GHKRGIWSVEFSPVDQVVITASGDKTIKIWSI 565
GH I V F P + ++++AS DK + + I
Sbjct: 326 GHAGSINEVAFHPDEPIILSASSDKRLYMGEI 357
Score = 141 (54.7 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 30/122 (24%), Positives = 57/122 (46%)
Query: 529 VVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSC--LKTFEGHTSSVLRASF 586
++ GH+ ++ +F P + +A D+ I +W++ G C T +GH+ +V+ +
Sbjct: 60 IMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVY-GDCDNYATLKGHSGAVMELHY 118
Query: 587 LTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKK-TEMFATGGSDALVN 645
T G+ + S D V +W TGE + H + + ++ ++ TG D V
Sbjct: 119 NTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVK 178
Query: 646 LW 647
LW
Sbjct: 179 LW 180
Score = 92 (37.4 bits), Expect = 5.1e-22, Sum P(2) = 5.1e-22
Identities = 34/124 (27%), Positives = 54/124 (43%)
Query: 345 LSKRLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMS----CSYVLAGH-SEIV 399
L+ + G+ + + L L E YL V+V+D+ + C + G+
Sbjct: 228 LTYTMRGHADSVTGLS-LSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFE 286
Query: 400 LCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVS 459
L C+ S I GS D V +WD+ SR + GH G++ VAF + ++S
Sbjct: 287 KNLLRCSWSPDGSKIAAGSADRFVYVWDTTSRRILYKLPGHAGSINEVAFHPD-EPIILS 345
Query: 460 GSSD 463
SSD
Sbjct: 346 ASSD 349
Score = 60 (26.2 bits), Expect = 5.0e-09, Sum P(2) = 5.0e-09
Identities = 13/37 (35%), Positives = 20/37 (54%)
Query: 181 VATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDL 217
+ L H V +GSTL SAG D+++ LW++
Sbjct: 60 IMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNV 96
>UNIPROTKB|F1SVA6 [details] [associations]
symbol:SNRNP40 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013 KO:K12857
OMA:HAGSVNE GeneTree:ENSGT00690000101787 EMBL:FP565415
RefSeq:XP_003356314.1 ProteinModelPortal:F1SVA6
Ensembl:ENSSSCT00000003991 GeneID:100624754 KEGG:ssc:100624754
Uniprot:F1SVA6
Length = 358
Score = 230 (86.0 bits), Expect = 5.6e-28, Sum P(2) = 5.6e-28
Identities = 60/161 (37%), Positives = 78/161 (48%)
Query: 100 GHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHY--FKGHKGVVSSILFHPDTD 157
GH+G HP+G LA+AG DR +L+W+V G C +Y KGH G V + H +TD
Sbjct: 65 GHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGD-CDNYATLKGHSGAVMEL--HYNTD 121
Query: 158 KSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDK-VVNLWD 216
S+LFS S D TV VWD + V L H S V S G L+ G D V LWD
Sbjct: 122 GSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWD 181
Query: 217 LRDYSCKLTVPTYEMVEAVCAIPPGSAFDSFLSSYNQQTIK 257
+R K + T++ V A+ D +S IK
Sbjct: 182 IRK---KAAIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIK 219
Score = 219 (82.2 bits), Expect = 3.3e-15, P = 3.3e-15
Identities = 71/271 (26%), Positives = 113/271 (41%)
Query: 391 VLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCC-VGVGTGHMGAVGAVAF 449
+L+GH V C C + + D + LW+ C GH GAV + +
Sbjct: 62 LLSGHEGEVYC---CKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHY 118
Query: 450 SKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPND-SL 508
+ + L S S+D T+ VW S+ E+ LK H +NS A L
Sbjct: 119 NTD-GSMLFSASTDKTVAVWD----SETGERVKRLKG------HTSFVNSCYPARRGPQL 167
Query: 509 VCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDG 568
VCTGS D T +W + ++ TF+ + + +V F+ +I+ D IK+W +
Sbjct: 168 VCTGSDDGTVKLWDIRKKAAIQTFQNTYQ-VLAVTFNDTSDQIISGGIDNDIKVWDLRQN 226
Query: 569 SCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRT----GECIATY--DKH--E 620
T GH SV S + G+ ++S D V++W VR C+ + + H E
Sbjct: 227 KLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFE 286
Query: 621 DKIWALAVGKKTEMFATGGSDALVNLWHDST 651
+ + A G +D V +W D+T
Sbjct: 287 KNLLRCSWSPDGSKIAAGSADRFVYVW-DTT 316
Score = 215 (80.7 bits), Expect = 9.6e-15, P = 9.6e-15
Identities = 51/173 (29%), Positives = 91/173 (52%)
Query: 54 STIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPS 113
+T++G S + L + D +LFS+ + + VWD T + ++ KGH + +C+P+
Sbjct: 104 ATLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHT--SFVNSCYPA 161
Query: 114 G-G--LLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATV 170
G L+ T D V +WD+ F+ V++ + F+ +D+ + SG D +
Sbjct: 162 RRGPQLVCTGSDDGTVKLWDIRKKAAIQTFQNTYQVLA-VTFNDTSDQ--IISGGIDNDI 218
Query: 171 RVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCK 223
+VWDL K T+ H VT ++++S+GS L+S D V +WD+R ++ K
Sbjct: 219 KVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPK 271
Score = 183 (69.5 bits), Expect = 4.3e-11, P = 4.3e-11
Identities = 72/304 (23%), Positives = 128/304 (42%)
Query: 349 LVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYV-LAGHSEIVLCLDTCAL 407
L G+ E+ KF LA A + ++++ +Y L GHS V+ L
Sbjct: 63 LSGHEGEVYCCKF-HPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYN-- 119
Query: 408 SSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIK 467
+ G +L + S D +V +WDSE+ V GH V + +++ + +GS D T+K
Sbjct: 120 TDGSMLF-SASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVK 178
Query: 468 VWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSL--VCTGSQDRTACVWRLPD 525
+W +++ KA + LAV ND+ + +G D VW L
Sbjct: 179 LW-------------DIRKKAAIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQ 225
Query: 526 LVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGS----CLKTFEGHT--- 578
T RGH + + S +++ + D T+++W + + C+K F+G+
Sbjct: 226 NKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNF 285
Query: 579 -SSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFAT 637
++LR S+ G++I + AD V +W + + H I +A + +
Sbjct: 286 EKNLLRCSWSPDGSKIAAGSADRFVYVWDTTSRRILYKLPGHAGSINEVAFHPDEPIILS 345
Query: 638 GGSD 641
SD
Sbjct: 346 ASSD 349
Score = 174 (66.3 bits), Expect = 4.5e-10, P = 4.5e-10
Identities = 43/148 (29%), Positives = 71/148 (47%)
Query: 28 SSDGSFIACACGESINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRVW 87
+SD I+ I + DL + T+ G +D++T L+LS + L S+ +RVW
Sbjct: 205 TSD-QIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVW 263
Query: 88 DLSTL----KCLRSWKG--HDGPAIGMACH--PSGGLLATAGADRKVLVWDVDGGFCTHY 139
D+ +C++ ++G H+ + C P G +A ADR V VWD +
Sbjct: 264 DVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDTTSRRILYK 323
Query: 140 FKGHKGVVSSILFHPDTDKSLLFSGSDD 167
GH G ++ + FHPD + ++ S S D
Sbjct: 324 LPGHAGSINEVAFHPD--EPIILSASSD 349
Score = 164 (62.8 bits), Expect = 5.9e-09, P = 5.9e-09
Identities = 52/198 (26%), Positives = 88/198 (44%)
Query: 31 GSFIACACGESINIVDLSNASIKSTIEGGSDTITALALSPDDKL--LFSSGHSREIRVWD 88
G + C G V L + K+ I+ +T LA++ +D + S G +I+VWD
Sbjct: 164 GPQLVCT-GSDDGTVKLWDIRKKAAIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWD 222
Query: 89 LSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDV----DGGFCTHYFKGH- 143
L K + +GH G++ G L + D V VWDV C F+G+
Sbjct: 223 LRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNV 282
Query: 144 KGVVSSIL---FHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDG 200
++L + PD K + +GS D V VWD +++ + L H + +A D
Sbjct: 283 HNFEKNLLRCSWSPDGSK--IAAGSADRFVYVWDTTSRRILYKLPGHAGSINEVAFHPDE 340
Query: 201 STLISAGRDKVVNLWDLR 218
++SA DK + + +++
Sbjct: 341 PIILSASSDKRLYMGEIQ 358
Score = 149 (57.5 bits), Expect = 5.6e-28, Sum P(2) = 5.6e-28
Identities = 38/152 (25%), Positives = 73/152 (48%)
Query: 414 IVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDG 473
I++G DN +++WD GH +V ++ S + ++L+S + D+T++VW
Sbjct: 209 IISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSE-GSYLLSNAMDNTVRVWDVRP 267
Query: 474 LSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFR 533
+ E+ + + + V K++ + +P+ S + GS DR VW +
Sbjct: 268 FAPK-ERCVKI-FQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDTTSRRILYKLP 325
Query: 534 GHKRGIWSVEFSPVDQVVITASGDKTIKIWSI 565
GH I V F P + ++++AS DK + + I
Sbjct: 326 GHAGSINEVAFHPDEPIILSASSDKRLYMGEI 357
Score = 141 (54.7 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 30/122 (24%), Positives = 57/122 (46%)
Query: 529 VVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSC--LKTFEGHTSSVLRASF 586
++ GH+ ++ +F P + +A D+ I +W++ G C T +GH+ +V+ +
Sbjct: 60 IMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVY-GDCDNYATLKGHSGAVMELHY 118
Query: 587 LTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKK-TEMFATGGSDALVN 645
T G+ + S D V +W TGE + H + + ++ ++ TG D V
Sbjct: 119 NTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVK 178
Query: 646 LW 647
LW
Sbjct: 179 LW 180
Score = 92 (37.4 bits), Expect = 5.1e-22, Sum P(2) = 5.1e-22
Identities = 34/124 (27%), Positives = 54/124 (43%)
Query: 345 LSKRLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMS----CSYVLAGH-SEIV 399
L+ + G+ + + L L E YL V+V+D+ + C + G+
Sbjct: 228 LTYTMRGHADSVTGLS-LSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFE 286
Query: 400 LCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVS 459
L C+ S I GS D V +WD+ SR + GH G++ VAF + ++S
Sbjct: 287 KNLLRCSWSPDGSKIAAGSADRFVYVWDTTSRRILYKLPGHAGSINEVAFHPD-EPIILS 345
Query: 460 GSSD 463
SSD
Sbjct: 346 ASSD 349
Score = 60 (26.2 bits), Expect = 5.0e-09, Sum P(2) = 5.0e-09
Identities = 13/37 (35%), Positives = 20/37 (54%)
Query: 181 VATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDL 217
+ L H V +GSTL SAG D+++ LW++
Sbjct: 60 IMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNV 96
>POMBASE|SPAC29E6.01 [details] [associations]
symbol:pof11 "F-box protein Pof11" species:4896
"Schizosaccharomyces pombe" [GO:0000151 "ubiquitin ligase complex"
evidence=ISM] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005829 "cytosol" evidence=IDA] [GO:0016567 "protein
ubiquitination" evidence=ISM] [GO:0030674 "protein binding,
bridging" evidence=ISM] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
PomBase:SPAC29E6.01 GO:GO:0005829 GO:GO:0007126 EMBL:CU329670
GenomeReviews:CU329670_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030674 SUPFAM:SSF81383
GO:GO:0016567 GO:GO:0000151 KO:K03362 EMBL:Z66525 EMBL:AB061694
PIR:T38502 PIR:T50211 RefSeq:NP_594559.1 ProteinModelPortal:Q09855
IntAct:Q09855 EnsemblFungi:SPAC29E6.01.1 GeneID:2541707
KEGG:spo:SPAC29E6.01 OMA:CIEANDK OrthoDB:EOG4HQHSG NextBio:20802799
Uniprot:Q09855
Length = 506
Score = 336 (123.3 bits), Expect = 6.5e-28, P = 6.5e-28
Identities = 85/282 (30%), Positives = 141/282 (50%)
Query: 365 EEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVR 424
+++ + + V V+D++S Y L GHS VLCLD C + L+V+GS D+++
Sbjct: 230 DDEIMVSGSKDRTVSVWDVNSRFILYKLYGHSGSVLCLDFCRRRN---LLVSGSSDSTII 286
Query: 425 LWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNL 484
+WD ++R + V GH V V S +N+++S S DHT +VW D S AE M+
Sbjct: 287 IWDWQNRRPLKVYFGHTDNVLGVVVS---ENYIISSSRDHTARVWRLDATSP-AEACMH- 341
Query: 485 KAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEF 544
V+ H +NS+ + L+ T S DRT W + + H+RGI ++
Sbjct: 342 ----VLRGHLASVNSVQYSSKTGLIVTASSDRTLRTWDITTGHCIRIIHAHQRGIACAQY 397
Query: 545 SPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKL 604
+ + +++ S D TI+I+ S G L+ +GH + F +IVS G DG V++
Sbjct: 398 N--GKFIVSGSSDLTIRIFEASSGKLLRMLQGHEDLIRTVRF--NDEKIVSGGYDGTVRI 453
Query: 605 WTVRTGE--CIATYDKHEDKIWALAVGKKTEMFATGGSDALV 644
W TGE C+ ++ +++ L + + T S+ LV
Sbjct: 454 WNFNTGEQHCVL-HNSRNSRVFGLQFDHRRIIACTHSSEILV 494
Score = 301 (111.0 bits), Expect = 7.7e-24, P = 7.7e-24
Identities = 77/243 (31%), Positives = 125/243 (51%)
Query: 413 LIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFD 472
++V+GSKD +V +WD SR + GH G+V + F ++ +N LVSGSSD TI +W +
Sbjct: 233 IMVSGSKDRTVSVWDVNSRFILYKLYGHSGSVLCLDFCRR-RNLLVSGSSDSTIIIWDWQ 291
Query: 473 GLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRL----PDLVS 528
+P+ V H D N L V +++ + + S+D TA VWRL P
Sbjct: 292 N-----RRPLK-----VYFGH-TD-NVLGVVVSENYIISSSRDHTARVWRLDATSPAEAC 339
Query: 529 VVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLT 588
+ RGH + SV++S +++TAS D+T++ W I+ G C++ H + A +
Sbjct: 340 MHVLRGHLASVNSVQYSSKTGLIVTASSDRTLRTWDITTGHCIRIIHAHQRGIACAQY-- 397
Query: 589 RGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLWH 648
G IVS +D ++++ +G+ + HED I V E +GG D V +W+
Sbjct: 398 NGKFIVSGSSDLTIRIFEASSGKLLRMLQGHEDLI--RTVRFNDEKIVSGGYDGTVRIWN 455
Query: 649 DST 651
+T
Sbjct: 456 FNT 458
Score = 163 (62.4 bits), Expect = 1.6e-16, Sum P(2) = 1.6e-16
Identities = 39/156 (25%), Positives = 70/156 (44%)
Query: 71 DDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWD 130
DD+++ S R + VWD+++ L GH G + + LL + +D +++WD
Sbjct: 230 DDEIMVSGSKDRTVSVWDVNSRFILYKLYGHSGSVLCLDFCRRRNLLVSGSSDSTIIIWD 289
Query: 131 VDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDL----LAKKCVATLDK 186
+ GH V ++ ++ + S S D T RVW L A+ C+ L
Sbjct: 290 WQNRRPLKVYFGHTDNVLGVV----VSENYIISSSRDHTARVWRLDATSPAEACMHVLRG 345
Query: 187 HFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSC 222
H + V S+ +S +++A D+ + WD+ C
Sbjct: 346 HLASVNSVQYSSKTGLIVTASSDRTLRTWDITTGHC 381
Score = 158 (60.7 bits), Expect = 5.6e-08, P = 5.6e-08
Identities = 46/211 (21%), Positives = 86/211 (40%)
Query: 15 VLQQFYGGGPLVVSSD-----GSFIACACGESINIVDLSNASIKSTIEGGSDTITALALS 69
+L + YG V+ D ++ + +I I D N G +D + + +S
Sbjct: 253 ILYKLYGHSGSVLCLDFCRRRNLLVSGSSDSTIIIWDWQNRRPLKVYFGHTDNVLGVVVS 312
Query: 70 PDDKLLFSSGHSREIRVWDLSTLK----CLRSWKGHDGPAIGMACHPSGGLLATAGADRK 125
+ + SS RVW L C+ +GH + GL+ TA +DR
Sbjct: 313 --ENYIISSSRDHTARVWRLDATSPAEACMHVLRGHLASVNSVQYSSKTGLIVTASSDRT 370
Query: 126 VLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLD 185
+ WD+ G C H+ ++ ++ + SGS D T+R+++ + K + L
Sbjct: 371 LRTWDITTGHCIRIIHAHQRGIACAQYNG----KFIVSGSSDLTIRIFEASSGKLLRMLQ 426
Query: 186 KHFSRVTSMAITSDGSTLISAGRDKVVNLWD 216
H + ++ + ++S G D V +W+
Sbjct: 427 GHEDLIRTVRFNDE--KIVSGGYDGTVRIWN 455
Score = 155 (59.6 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 41/180 (22%), Positives = 79/180 (43%)
Query: 41 SINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKG 100
++++ D+++ I + G S ++ L LL S I +WD + L+ + G
Sbjct: 242 TVSVWDVNSRFILYKLYGHSGSVLCLDFCRRRNLLVSGSSDSTIIIWDWQNRRPLKVYFG 301
Query: 101 HDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGF----CTHYFKGHKGVVSSILFHPDT 156
H +G+ S + ++ D VW +D C H +GH V+S+ + T
Sbjct: 302 HTDNVLGVVV--SENYIISSSRDHTARVWRLDATSPAEACMHVLRGHLASVNSVQYSSKT 359
Query: 157 DKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWD 216
L+ + S D T+R WD+ C+ + H R + A +G ++S D + +++
Sbjct: 360 --GLIVTASSDRTLRTWDITTGHCIRIIHAH-QRGIACA-QYNGKFIVSGSSDLTIRIFE 415
Score = 152 (58.6 bits), Expect = 2.5e-07, P = 2.5e-07
Identities = 38/151 (25%), Positives = 66/151 (43%)
Query: 505 NDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWS 564
+D ++ +GS+DRT VW + + GH + ++F ++++ S D TI IW
Sbjct: 230 DDEIMVSGSKDRTVSVWDVNSRFILYKLYGHSGSVLCLDFCRRRNLLVSGSSDSTIIIWD 289
Query: 565 ISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLW----TVRTGECIATYDKHE 620
+ LK + GHT +VL + I+S D ++W T C+ H
Sbjct: 290 WQNRRPLKVYFGHTDNVL--GVVVSENYIISSSRDHTARVWRLDATSPAEACMHVLRGHL 347
Query: 621 DKIWALAVGKKTEMFATGGSDALVNLWHDST 651
+ ++ KT + T SD + W +T
Sbjct: 348 ASVNSVQYSSKTGLIVTASSDRTLRTWDITT 378
Score = 123 (48.4 bits), Expect = 1.6e-16, Sum P(2) = 1.6e-16
Identities = 41/162 (25%), Positives = 69/162 (42%)
Query: 408 SSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIK 467
SS LIVT S D ++R WD + C+ + H + ++ K F+VSGSSD TI+
Sbjct: 356 SSKTGLIVTASSDRTLRTWDITTGHCIRIIHAHQRGIACAQYNGK---FIVSGSSDLTIR 412
Query: 468 VWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRL-PDL 526
+ F+ S K ++ H I ++ ND + +G D T +W
Sbjct: 413 I--FEASSG--------KLLRMLQGHEDLIRTVRF--NDEKIVSGGYDGTVRIWNFNTGE 460
Query: 527 VSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDG 568
V ++ ++F + +I + I +W+ DG
Sbjct: 461 QHCVLHNSRNSRVFGLQFD--HRRIIACTHSSEILVWNFDDG 500
>UNIPROTKB|F1NUK8 [details] [associations]
symbol:SNRNP40 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013 OMA:HAGSVNE
GeneTree:ENSGT00690000101787 EMBL:AADN02051366 EMBL:AADN02051367
EMBL:AADN02051368 EMBL:AADN02051369 EMBL:AADN02051370
EMBL:AADN02051371 EMBL:AADN02051372 EMBL:AADN02051373
IPI:IPI00593723 Ensembl:ENSGALT00000041219 ArrayExpress:F1NUK8
Uniprot:F1NUK8
Length = 384
Score = 227 (85.0 bits), Expect = 1.4e-26, Sum P(2) = 1.4e-26
Identities = 61/161 (37%), Positives = 77/161 (47%)
Query: 100 GHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHY--FKGHKGVVSSILFHPDTD 157
GH+G HP G LA+AG DR +L+W+V G C +Y KGH G V + H +TD
Sbjct: 91 GHEGEVYCCKFHPWGNTLASAGFDRLILLWNVYGD-CDNYATLKGHSGAVMEL--HYNTD 147
Query: 158 KSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDK-VVNLWD 216
S+LFS S D TV VWD + V L H S V S G L+ G D V LWD
Sbjct: 148 GSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWD 207
Query: 217 LRDYSCKLTVPTYEMVEAVCAIPPGSAFDSFLSSYNQQTIK 257
+R K V T++ V A+ D +S IK
Sbjct: 208 IRK---KAAVQTFQNTYQVLAVTFNDTSDQIISGGIDNDIK 245
Score = 217 (81.4 bits), Expect = 7.9e-15, P = 7.9e-15
Identities = 51/173 (29%), Positives = 91/173 (52%)
Query: 54 STIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPS 113
+T++G S + L + D +LFS+ + + VWD T + ++ KGH + +C+P+
Sbjct: 130 ATLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHT--SFVNSCYPA 187
Query: 114 G-G--LLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATV 170
G L+ T D V +WD+ F+ V++ + F+ +D+ + SG D +
Sbjct: 188 RRGPQLVCTGSDDGTVKLWDIRKKAAVQTFQNTYQVLA-VTFNDTSDQ--IISGGIDNDI 244
Query: 171 RVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCK 223
+VWDL K T+ H VT ++++S+GS L+S D V +WD+R ++ K
Sbjct: 245 KVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRIWDVRPFAPK 297
Score = 216 (81.1 bits), Expect = 1.0e-14, P = 1.0e-14
Identities = 72/271 (26%), Positives = 113/271 (41%)
Query: 391 VLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCC-VGVGTGHMGAVGAVAF 449
+L+GH V C C + + D + LW+ C GH GAV + +
Sbjct: 88 LLSGHEGEVYC---CKFHPWGNTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHY 144
Query: 450 SKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPND-SL 508
+ + L S S+D T+ VW S+ E+ LK H +NS A L
Sbjct: 145 NTD-GSMLFSASTDKTVAVWD----SETGERVKRLKG------HTSFVNSCYPARRGPQL 193
Query: 509 VCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDG 568
VCTGS D T +W + +V TF+ + + +V F+ +I+ D IK+W +
Sbjct: 194 VCTGSDDGTVKLWDIRKKAAVQTFQNTYQ-VLAVTFNDTSDQIISGGIDNDIKVWDLRQN 252
Query: 569 SCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRT----GECIATY--DKH--E 620
T GH SV S + G+ ++S D V++W VR C+ + + H E
Sbjct: 253 KLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRIWDVRPFAPKERCVKIFQGNVHNFE 312
Query: 621 DKIWALAVGKKTEMFATGGSDALVNLWHDST 651
+ + A G +D V +W D+T
Sbjct: 313 KNLLRCSWSPDGSKIAGGSADRFVYVW-DTT 342
Score = 186 (70.5 bits), Expect = 2.5e-11, P = 2.5e-11
Identities = 65/260 (25%), Positives = 111/260 (42%)
Query: 392 LAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSK 451
L GHS V+ L + G +L + S D +V +WDSE+ V GH V + ++
Sbjct: 132 LKGHSGAVMELHYN--TDGSMLF-SASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPAR 188
Query: 452 KLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSL--V 509
+ + +GS D T+K+W +++ KA V LAV ND+ +
Sbjct: 189 RGPQLVCTGSDDGTVKLW-------------DIRKKAAVQTFQNTYQVLAVTFNDTSDQI 235
Query: 510 CTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGS 569
+G D VW L T RGH + + S +++ + D T++IW + +
Sbjct: 236 ISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRIWDVRPFA 295
Query: 570 ----CLKTFEGHT----SSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHED 621
C+K F+G+ ++LR S+ G++I AD V +W + + H
Sbjct: 296 PKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAGGSADRFVYVWDTTSRRILYKLPGHAG 355
Query: 622 KIWALAVGKKTEMFATGGSD 641
+ LA + + + SD
Sbjct: 356 SVNELAFHPEEPIILSASSD 375
Score = 168 (64.2 bits), Expect = 2.5e-09, P = 2.5e-09
Identities = 61/260 (23%), Positives = 110/260 (42%)
Query: 349 LVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTC-AL 407
L G++ +++L + + + +T+ + V V+D + L GH+ V ++C
Sbjct: 132 LKGHSGAVMELHYNTDGSMLFSASTD-KTVAVWDSETGERVKRLKGHTSFV---NSCYPA 187
Query: 408 SSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIK 467
G L+ TGS D +V+LWD + V + AV F+ ++SG D+ IK
Sbjct: 188 RRGPQLVCTGSDDGTVKLWDIRKKAAVQTFQNTYQVL-AVTFNDTSDQ-IISGGIDNDIK 245
Query: 468 VWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRL---- 523
VW D Q N K + H + L+++ S + + + D T +W +
Sbjct: 246 VW-------DLRQ--N-KLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRIWDVRPFA 295
Query: 524 PDLVSVVTFRGH----KRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTS 579
P V F+G+ ++ + +SP + S D+ + +W + L GH
Sbjct: 296 PKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAGGSADRFVYVWDTTSRRILYKLPGHAG 355
Query: 580 SVLRASFLTRGAQIVSCGAD 599
SV +F I+S +D
Sbjct: 356 SVNELAFHPEEPIILSASSD 375
Score = 167 (63.8 bits), Expect = 3.2e-09, P = 3.2e-09
Identities = 42/148 (28%), Positives = 71/148 (47%)
Query: 28 SSDGSFIACACGESINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRVW 87
+SD I+ I + DL + T+ G +D++T L+LS + L S+ +R+W
Sbjct: 231 TSD-QIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRIW 289
Query: 88 DLSTL----KCLRSWKG--HDGPAIGMACH--PSGGLLATAGADRKVLVWDVDGGFCTHY 139
D+ +C++ ++G H+ + C P G +A ADR V VWD +
Sbjct: 290 DVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAGGSADRFVYVWDTTSRRILYK 349
Query: 140 FKGHKGVVSSILFHPDTDKSLLFSGSDD 167
GH G V+ + FHP+ + ++ S S D
Sbjct: 350 LPGHAGSVNELAFHPE--EPIILSASSD 375
Score = 159 (61.0 bits), Expect = 2.5e-08, P = 2.5e-08
Identities = 50/198 (25%), Positives = 87/198 (43%)
Query: 31 GSFIACACGESINIVDLSNASIKSTIEGGSDTITALALSPDDKL--LFSSGHSREIRVWD 88
G + C G V L + K+ ++ +T LA++ +D + S G +I+VWD
Sbjct: 190 GPQLVCT-GSDDGTVKLWDIRKKAAVQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWD 248
Query: 89 LSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDV----DGGFCTHYFKGH- 143
L K + +GH G++ G L + D V +WDV C F+G+
Sbjct: 249 LRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRIWDVRPFAPKERCVKIFQGNV 308
Query: 144 KGVVSSIL---FHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDG 200
++L + PD K + GS D V VWD +++ + L H V +A +
Sbjct: 309 HNFEKNLLRCSWSPDGSK--IAGGSADRFVYVWDTTSRRILYKLPGHAGSVNELAFHPEE 366
Query: 201 STLISAGRDKVVNLWDLR 218
++SA DK + + +++
Sbjct: 367 PIILSASSDKRLYMGEIQ 384
Score = 143 (55.4 bits), Expect = 1.4e-26, Sum P(2) = 1.4e-26
Identities = 35/152 (23%), Positives = 73/152 (48%)
Query: 414 IVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDG 473
I++G DN +++WD GH +V ++ S + ++L+S + D+T+++W
Sbjct: 235 IISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSE-GSYLLSNAMDNTVRIWDVRP 293
Query: 474 LSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFR 533
+ E+ + + + V K++ + +P+ S + GS DR VW +
Sbjct: 294 FAPK-ERCVKI-FQGNVHNFEKNLLRCSWSPDGSKIAGGSADRFVYVWDTTSRRILYKLP 351
Query: 534 GHKRGIWSVEFSPVDQVVITASGDKTIKIWSI 565
GH + + F P + ++++AS DK + + I
Sbjct: 352 GHAGSVNELAFHPEEPIILSASSDKRLYMGEI 383
Score = 141 (54.7 bits), Expect = 2.4e-06, P = 2.4e-06
Identities = 30/122 (24%), Positives = 57/122 (46%)
Query: 529 VVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSC--LKTFEGHTSSVLRASF 586
++ GH+ ++ +F P + +A D+ I +W++ G C T +GH+ +V+ +
Sbjct: 86 IMLLSGHEGEVYCCKFHPWGNTLASAGFDRLILLWNVY-GDCDNYATLKGHSGAVMELHY 144
Query: 587 LTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKK-TEMFATGGSDALVN 645
T G+ + S D V +W TGE + H + + ++ ++ TG D V
Sbjct: 145 NTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVK 204
Query: 646 LW 647
LW
Sbjct: 205 LW 206
>ASPGD|ASPL0000006214 [details] [associations]
symbol:AN6385 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 PROSITE:PS00678 InterPro:IPR019775
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001301
InterPro:IPR011047 SUPFAM:SSF50998 EMBL:AACD01000108
HOGENOM:HOG000091642 RefSeq:XP_663989.1 ProteinModelPortal:Q5AZ95
EnsemblFungi:CADANIAT00006594 GeneID:2871285 KEGG:ani:AN6385.2
OMA:LHPFEGH OrthoDB:EOG42NN9D Uniprot:Q5AZ95
Length = 434
Score = 273 (101.2 bits), Expect = 5.3e-21, P = 5.3e-21
Identities = 58/166 (34%), Positives = 83/166 (50%)
Query: 51 SIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMAC 110
S+K TIEG SD + ++A SPD +LL S + I++WD +T + GH + +
Sbjct: 146 SLKHTIEGHSDWVLSVAFSPDGQLLASGSAEKTIKLWDSATCGLKHTLGGHSNWVLPLVF 205
Query: 111 HPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATV 170
P G LLA+ D + +WD G H +GH + S+ F P+ LL SGS DAT+
Sbjct: 206 SPDGRLLASGSNDATIKLWDPPSGSLKHTLEGHSNKIESLAFSPNGQ--LLASGSSDATI 263
Query: 171 RVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWD 216
++WD TL H V S+ + D L S D + LWD
Sbjct: 264 KLWDTATGSFRHTLKGHSDMVLSVVFSPDSQLLESGSGDNTIKLWD 309
Score = 239 (89.2 bits), Expect = 4.2e-17, P = 4.2e-17
Identities = 51/148 (34%), Positives = 79/148 (53%)
Query: 28 SSDGSFIACACGE-SINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRV 86
S DG +A E +I + D + +K T+ G S+ + L SPD +LL S + I++
Sbjct: 164 SPDGQLLASGSAEKTIKLWDSATCGLKHTLGGHSNWVLPLVFSPDGRLLASGSNDATIKL 223
Query: 87 WDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGV 146
WD + + +GH +A P+G LLA+ +D + +WD G H KGH +
Sbjct: 224 WDPPSGSLKHTLEGHSNKIESLAFSPNGQLLASGSSDATIKLWDTATGSFRHTLKGHSDM 283
Query: 147 VSSILFHPDTDKSLLFSGSDDATVRVWD 174
V S++F PD+ LL SGS D T+++WD
Sbjct: 284 VLSVVFSPDSQ--LLESGSGDNTIKLWD 309
Score = 232 (86.7 bits), Expect = 2.6e-16, P = 2.6e-16
Identities = 91/382 (23%), Positives = 168/382 (43%)
Query: 141 KGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDG 200
+GH + ++ F PD LL SGS+D T+++WD + TL+ H S V S+A + +G
Sbjct: 38 EGHSDWIETVTFSPDG--RLLASGSNDTTIKLWDPASGGLKQTLEGHSSSVQSVAFSPNG 95
Query: 201 STLISAGRDKVVNLWDLRDYSCKLTVPTY-EMVEAVCAIPPGSAFDSFLSSYNQQTIKKK 259
L S D + LW+ S K T+ + + VE+V P G ++ + S
Sbjct: 96 QLLASGSSDTTIKLWNSASDSLKHTMEGHSDRVESVAFSPNGQLWNPAIGSLKHTIEGHS 155
Query: 260 RRSLEIHFITVGERGIVRMWNADSAC-LYEQKSSDVTISFEMDDSKRGFTAATVLPSNQG 318
L + F G+ ++ +A+ L++ S+ + + P +
Sbjct: 156 DWVLSVAFSPDGQ--LLASGSAEKTIKLWD--SATCGLKHTLGGHSNWVLPLVFSPDGRL 211
Query: 319 LLCVTADQQLLLYTTVEVPEKKMELILSKRLVGYNEEILDLKFLGEEEQYLAVATNIEQV 378
L + D + L+ + P L L G++ +I L F Q LA ++ +
Sbjct: 212 LASGSNDATIKLW---DPPSGS----LKHTLEGHSNKIESLAF-SPNGQLLASGSSDATI 263
Query: 379 QVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVGT 438
+++D ++ S + L GHS++VL + S L+ +GS DN+++LWD + G+
Sbjct: 264 KLWDTATGSFRHTLKGHSDMVLSV---VFSPDSQLLESGSGDNTIKLWDPAT----GILK 316
Query: 439 GHM---GAVGAVAFSKKLQNFLVSGSSDHTIKVW--SFDGLSDDAEQPMNLKAKAVVAAH 493
M G V ++ FS +L L++ +I+ W + S + ++++ VA
Sbjct: 317 HSMRTPGIVRSIEFSIELPQ-LITNLGTFSIQAWHTGYPSRSSGKKTAVSVQRNRWVAIQ 375
Query: 494 GKDINSLAVAPNDSLVCTGSQD 515
G+ L + P + + QD
Sbjct: 376 GQ--KELWIPPEYQPISSAVQD 395
Score = 223 (83.6 bits), Expect = 2.6e-15, P = 2.6e-15
Identities = 62/221 (28%), Positives = 101/221 (45%)
Query: 28 SSDGSFIACACGES-INIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRV 86
S DG +A ++ I + D ++ +K T+EG S ++ ++A SP+ +LL S I++
Sbjct: 50 SPDGRLLASGSNDTTIKLWDPASGGLKQTLEGHSSSVQSVAFSPNGQLLASGSSDTTIKL 109
Query: 87 WDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGV 146
W+ ++ + +GH +A P+G L W+ G H +GH
Sbjct: 110 WNSASDSLKHTMEGHSDRVESVAFSPNGQL------------WNPAIGSLKHTIEGHSDW 157
Query: 147 VSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISA 206
V S+ F PD LL SGS + T+++WD TL H + V + + DG L S
Sbjct: 158 VLSVAFSPDGQ--LLASGSAEKTIKLWDSATCGLKHTLGGHSNWVLPLVFSPDGRLLASG 215
Query: 207 GRDKVVNLWDLRDYSCKLTVPTYE-MVEAVCAIPPGSAFDS 246
D + LWD S K T+ + +E++ P G S
Sbjct: 216 SNDATIKLWDPPSGSLKHTLEGHSNKIESLAFSPNGQLLAS 256
Score = 222 (83.2 bits), Expect = 5.4e-26, Sum P(2) = 5.4e-26
Identities = 45/165 (27%), Positives = 78/165 (47%)
Query: 487 KAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSP 546
K + H + S+A +P+ L+ +GS ++T +W T GH + + FSP
Sbjct: 148 KHTIEGHSDWVLSVAFSPDGQLLASGSAEKTIKLWDSATCGLKHTLGGHSNWVLPLVFSP 207
Query: 547 VDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWT 606
+++ + S D TIK+W GS T EGH++ + +F G + S +D +KLW
Sbjct: 208 DGRLLASGSNDATIKLWDPPSGSLKHTLEGHSNKIESLAFSPNGQLLASGSSDATIKLWD 267
Query: 607 VRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLWHDST 651
TG T H D + ++ +++ +G D + LW +T
Sbjct: 268 TATGSFRHTLKGHSDMVLSVVFSPDSQLLESGSGDNTIKLWDPAT 312
Score = 219 (82.2 bits), Expect = 1.2e-25, Sum P(2) = 1.2e-25
Identities = 60/173 (34%), Positives = 86/173 (49%)
Query: 439 GHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDIN 498
GH V +VAFS Q L SGS++ TIK+W D A + K + H +
Sbjct: 153 GHSDWVLSVAFSPDGQ-LLASGSAEKTIKLW------DSATCGL----KHTLGGHSNWVL 201
Query: 499 SLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDK 558
L +P+ L+ +GS D T +W P T GH I S+ FSP Q++ + S D
Sbjct: 202 PLVFSPDGRLLASGSNDATIKLWDPPSGSLKHTLEGHSNKIESLAFSPNGQLLASGSSDA 261
Query: 559 TIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGA-DGLVKLWTVRTG 610
TIK+W + GS T +GH+ VL F + +Q++ G+ D +KLW TG
Sbjct: 262 TIKLWDTATGSFRHTLKGHSDMVLSVVF-SPDSQLLESGSGDNTIKLWDPATG 313
Score = 202 (76.2 bits), Expect = 5.8e-13, P = 5.8e-13
Identities = 76/281 (27%), Positives = 121/281 (43%)
Query: 55 TIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPSG 114
T+EG SD I + SPD +LL S + I++WD ++ ++ +GH +A P+G
Sbjct: 36 TLEGHSDWIETVTFSPDGRLLASGSNDTTIKLWDPASGGLKQTLEGHSSSVQSVAFSPNG 95
Query: 115 GLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWD 174
LLA+ +D + +W+ H +GH V S+ F P+ G ++W+
Sbjct: 96 QLLASGSSDTTIKLWNSASDSLKHTMEGHSDRVESVAFSPN--------G------QLWN 141
Query: 175 LLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYE-MVE 233
T++ H V S+A + DG L S +K + LWD K T+ + V
Sbjct: 142 PAIGSLKHTIEGHSDWVLSVAFSPDGQLLASGSAEKTIKLWDSATCGLKHTLGGHSNWVL 201
Query: 234 AVCAIPPGSAFDSFLSSYNQQTIK---KKRRSLEIHFITVGERGIVRMWNADSACLYEQK 290
+ P G S N TIK SL+ H + I + + + L
Sbjct: 202 PLVFSPDGRLL---ASGSNDATIKLWDPPSGSLK-HTLEGHSNKIESLAFSPNGQLLASG 257
Query: 291 SSDVTISFEMDDSKRGFTAATVLPSNQGLLCV--TADQQLL 329
SSD TI ++ D+ G T+ + +L V + D QLL
Sbjct: 258 SSDATI--KLWDTATGSFRHTLKGHSDMVLSVVFSPDSQLL 296
Score = 184 (69.8 bits), Expect = 5.7e-11, P = 5.7e-11
Identities = 45/151 (29%), Positives = 74/151 (49%)
Query: 24 PLVVSSDGSFIACACGES-INIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSR 82
PLV S DG +A ++ I + D + S+K T+EG S+ I +LA SP+ +LL S
Sbjct: 202 PLVFSPDGRLLASGSNDATIKLWDPPSGSLKHTLEGHSNKIESLAFSPNGQLLASGSSDA 261
Query: 83 EIRVWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKG 142
I++WD +T + KGH + + P LL + D + +WD G H +
Sbjct: 262 TIKLWDTATGSFRHTLKGHSDMVLSVVFSPDSQLLESGSGDNTIKLWDPATGILKHSMRT 321
Query: 143 HKGVVSSILFHPDTDKSLLFSGSDDATVRVW 173
G+V SI F + + + G+ +++ W
Sbjct: 322 -PGIVRSIEFSIELPQLITNLGT--FSIQAW 349
Score = 183 (69.5 bits), Expect = 1.6e-21, Sum P(2) = 1.6e-21
Identities = 64/220 (29%), Positives = 102/220 (46%)
Query: 345 LSKRLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDT 404
L + G+++ +L + F + Q LA + + ++++D ++ + L GHS VL L
Sbjct: 147 LKHTIEGHSDWVLSVAF-SPDGQLLASGSAEKTIKLWDSATCGLKHTLGGHSNWVLPL-- 203
Query: 405 CALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDH 464
S L+ +GS D +++LWD S GH + ++AFS Q L SGSSD
Sbjct: 204 -VFSPDGRLLASGSNDATIKLWDPPSGSLKHTLEGHSNKIESLAFSPNGQ-LLASGSSDA 261
Query: 465 TIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLP 524
TIK+W D A K H + S+ +P+ L+ +GS D T +W P
Sbjct: 262 TIKLW------DTATGSFRHTLKG----HSDMVLSVVFSPDSQLLESGSGDNTIKLWD-P 310
Query: 525 DLVSVVTFRGHKRGIW-SVEFSPVDQVVITASGDKTIKIW 563
++ GI S+EFS +IT G +I+ W
Sbjct: 311 -ATGILKHSMRTPGIVRSIEFSIELPQLITNLGTFSIQAW 349
Score = 182 (69.1 bits), Expect = 9.5e-11, P = 9.5e-11
Identities = 44/159 (27%), Positives = 72/159 (45%)
Query: 493 HGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVI 552
H I ++ +P+ L+ +GS D T +W T GH + SV FSP Q++
Sbjct: 40 HSDWIETVTFSPDGRLLASGSNDTTIKLWDPASGGLKQTLEGHSSSVQSVAFSPNGQLLA 99
Query: 553 TASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGEC 612
+ S D TIK+W+ + S T EGH+ V +F G +LW G
Sbjct: 100 SGSSDTTIKLWNSASDSLKHTMEGHSDRVESVAFSPNG------------QLWNPAIGSL 147
Query: 613 IATYDKHEDKIWALAVGKKTEMFATGGSDALVNLWHDST 651
T + H D + ++A ++ A+G ++ + LW +T
Sbjct: 148 KHTIEGHSDWVLSVAFSPDGQLLASGSAEKTIKLWDSAT 186
Score = 178 (67.7 bits), Expect = 2.6e-10, P = 2.6e-10
Identities = 47/161 (29%), Positives = 69/161 (42%)
Query: 487 KAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSP 546
K + H + S+A +PN L+ +GS D T +W T GH + SV FSP
Sbjct: 76 KQTLEGHSSSVQSVAFSPNGQLLASGSSDTTIKLWNSASDSLKHTMEGHSDRVESVAFSP 135
Query: 547 VDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWT 606
Q +W+ + GS T EGH+ VL +F G + S A+ +KLW
Sbjct: 136 NGQ------------LWNPAIGSLKHTIEGHSDWVLSVAFSPDGQLLASGSAEKTIKLWD 183
Query: 607 VRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLW 647
T T H + + L + A+G +DA + LW
Sbjct: 184 SATCGLKHTLGGHSNWVLPLVFSPDGRLLASGSNDATIKLW 224
Score = 177 (67.4 bits), Expect = 3.4e-10, P = 3.4e-10
Identities = 69/288 (23%), Positives = 122/288 (42%)
Query: 183 TLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYEM-VEAVCAIPPG 241
TL+ H + ++ + DG L S D + LWD K T+ + V++V P G
Sbjct: 36 TLEGHSDWIETVTFSPDGRLLASGSNDTTIKLWDPASGGLKQTLEGHSSSVQSVAFSPNG 95
Query: 242 SAFDSFLSSYNQQTIKKKRRSLEIHFITVGERGIVRMWNADSACLYEQKSSDVTISFEMD 301
S S + SL+ H + + + + + L+ ++ ++
Sbjct: 96 QLLASGSSDTTIKLWNSASDSLK-HTMEGHSDRVESVAFSPNGQLWNPAIG--SLKHTIE 152
Query: 302 DSKRGFTAATVLPSNQGLLCVTADQQLLLYTTVEVPEKKMELILSKRLVGYNEEILDLKF 361
+ P Q L +A++ + L+ + L L G++ +L L F
Sbjct: 153 GHSDWVLSVAFSPDGQLLASGSAEKTIKLWDSATCG-------LKHTLGGHSNWVLPLVF 205
Query: 362 LGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDN 421
+ + LA +N ++++D S S + L GHS + ++ A S L+ +GS D
Sbjct: 206 -SPDGRLLASGSNDATIKLWDPPSGSLKHTLEGHSNKI---ESLAFSPNGQLLASGSSDA 261
Query: 422 SVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVW 469
+++LWD+ + GH V +V FS Q L SGS D+TIK+W
Sbjct: 262 TIKLWDTATGSFRHTLKGHSDMVLSVVFSPDSQ-LLESGSGDNTIKLW 308
Score = 163 (62.4 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 33/105 (31%), Positives = 55/105 (52%)
Query: 531 TFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRG 590
T GH I +V FSP +++ + S D TIK+W + G +T EGH+SSV +F G
Sbjct: 36 TLEGHSDWIETVTFSPDGRLLASGSNDTTIKLWDPASGGLKQTLEGHSSSVQSVAFSPNG 95
Query: 591 AQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMF 635
+ S +D +KLW + T + H D++ ++A +++
Sbjct: 96 QLLASGSSDTTIKLWNSASDSLKHTMEGHSDRVESVAFSPNGQLW 140
Score = 147 (56.8 bits), Expect = 5.4e-26, Sum P(2) = 5.4e-26
Identities = 33/106 (31%), Positives = 53/106 (50%)
Query: 95 LRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHP 154
L++ +GH + P G LLA+ D + +WD G +GH V S+ F P
Sbjct: 34 LQTLEGHSDWIETVTFSPDGRLLASGSNDTTIKLWDPASGGLKQTLEGHSSSVQSVAFSP 93
Query: 155 DTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDG 200
+ LL SGS D T+++W+ + T++ H RV S+A + +G
Sbjct: 94 NGQ--LLASGSSDTTIKLWNSASDSLKHTMEGHSDRVESVAFSPNG 137
Score = 141 (54.7 bits), Expect = 2.3e-25, Sum P(2) = 2.3e-25
Identities = 41/117 (35%), Positives = 57/117 (48%)
Query: 392 LAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSK 451
L GHS+ + +T S L+ +GS D +++LWD S GH +V +VAFS
Sbjct: 37 LEGHSDWI---ETVTFSPDGRLLASGSNDTTIKLWDPASGGLKQTLEGHSSSVQSVAFSP 93
Query: 452 KLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSL 508
Q L SGSSD TIK+W+ SD + M H + S+A +PN L
Sbjct: 94 NGQ-LLASGSSDTTIKLWN--SASDSLKHTME--------GHSDRVESVAFSPNGQL 139
>ZFIN|ZDB-GENE-040426-978 [details] [associations]
symbol:snrnp40 "small nuclear ribonucleoprotein 40
(U5)" species:7955 "Danio rerio" [GO:0008150 "biological_process"
evidence=ND] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-040426-978 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003676 GO:GO:0030529
HSSP:P16649 HOGENOM:HOG000091644 KO:K12857 OMA:HAGSVNE
GeneTree:ENSGT00690000101787 CTD:9410 HOVERGEN:HBG105197
OrthoDB:EOG4JM7Q0 EMBL:CU207343 EMBL:BC051783 IPI:IPI00506401
RefSeq:NP_956616.1 UniGene:Dr.133508 STRING:Q7ZTY9
Ensembl:ENSDART00000038230 GeneID:393292 KEGG:dre:393292
InParanoid:Q7ZTY9 NextBio:20814348 Uniprot:Q7ZTY9
Length = 347
Score = 227 (85.0 bits), Expect = 2.9e-16, P = 2.9e-16
Identities = 54/173 (31%), Positives = 93/173 (53%)
Query: 54 STIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPS 113
+T++G S + L + D LLFS+ + + VWD T + ++ KGH + +C P+
Sbjct: 93 ATLKGHSGAVMELHYNTDGSLLFSASTDKTVCVWDSETGERVKRLKGHT--SFVNSCFPA 150
Query: 114 --GGLLATAGADR-KVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATV 170
G LA G+D V +WD+ H F+ V+S + F+ +D+ + SG D +
Sbjct: 151 RRGPQLACTGSDDGTVKLWDIRKKASVHTFQNTYQVLS-VTFNDTSDQ--IISGGIDNDI 207
Query: 171 RVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCK 223
+VWDL K + ++ H VT +++++DGS L+S D V +WD+R ++ K
Sbjct: 208 KVWDLRQNKLIYSMQGHGDSVTGLSLSADGSYLLSNSMDNSVRVWDIRPFAPK 260
Score = 221 (82.9 bits), Expect = 7.7e-26, Sum P(2) = 7.7e-26
Identities = 60/161 (37%), Positives = 78/161 (48%)
Query: 100 GHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHY--FKGHKGVVSSILFHPDTD 157
GH+G HP+G LA++G DR +L+W+V G C +Y KGH G V + H +TD
Sbjct: 54 GHEGEVYCCKFHPNGATLASSGYDRLILMWNVYGD-CENYATLKGHSGAVMEL--HYNTD 110
Query: 158 KSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDK-VVNLWD 216
SLLFS S D TV VWD + V L H S V S G L G D V LWD
Sbjct: 111 GSLLFSASTDKTVCVWDSETGERVKRLKGHTSFVNSCFPARRGPQLACTGSDDGTVKLWD 170
Query: 217 LRDYSCKLTVPTYEMVEAVCAIPPGSAFDSFLSSYNQQTIK 257
+R K +V T++ V ++ D +S IK
Sbjct: 171 IRK---KASVHTFQNTYQVLSVTFNDTSDQIISGGIDNDIK 208
Score = 215 (80.7 bits), Expect = 8.0e-15, P = 8.0e-15
Identities = 70/272 (25%), Positives = 113/272 (41%)
Query: 391 VLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVGT--GHMGAVGAVA 448
+L+GH V C C + + D + +W+ C T GH GAV +
Sbjct: 51 LLSGHEGEVYC---CKFHPNGATLASSGYDRLILMWNVYGDC-ENYATLKGHSGAVMELH 106
Query: 449 FSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPND-S 507
++ + L S S+D T+ VW S+ E+ LK H +NS A
Sbjct: 107 YNTD-GSLLFSASTDKTVCVWD----SETGERVKRLKG------HTSFVNSCFPARRGPQ 155
Query: 508 LVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISD 567
L CTGS D T +W + SV TF+ + + SV F+ +I+ D IK+W +
Sbjct: 156 LACTGSDDGTVKLWDIRKKASVHTFQNTYQ-VLSVTFNDTSDQIISGGIDNDIKVWDLRQ 214
Query: 568 GSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRT----GECIATY--DKH-- 619
+ + +GH SV S G+ ++S D V++W +R C+ + + H
Sbjct: 215 NKLIYSMQGHGDSVTGLSLSADGSYLLSNSMDNSVRVWDIRPFAPKERCVKIFQGNVHNF 274
Query: 620 EDKIWALAVGKKTEMFATGGSDALVNLWHDST 651
E + + A G +D V +W +T
Sbjct: 275 EKNLLRCSWSADGSKIAAGSADRFVYIWDTTT 306
Score = 179 (68.1 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 63/260 (24%), Positives = 113/260 (43%)
Query: 392 LAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSK 451
L GHS V+ L + G +L + S D +V +WDSE+ V GH V + ++
Sbjct: 95 LKGHSGAVMELHYN--TDGSLLF-SASTDKTVCVWDSETGERVKRLKGHTSFVNSCFPAR 151
Query: 452 KLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSL--V 509
+ +GS D T+K+W +++ KA V L+V ND+ +
Sbjct: 152 RGPQLACTGSDDGTVKLW-------------DIRKKASVHTFQNTYQVLSVTFNDTSDQI 198
Query: 510 CTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGS 569
+G D VW L + + +GH + + S +++ S D ++++W I +
Sbjct: 199 ISGGIDNDIKVWDLRQNKLIYSMQGHGDSVTGLSLSADGSYLLSNSMDNSVRVWDIRPFA 258
Query: 570 ----CLKTFEGHT----SSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHED 621
C+K F+G+ ++LR S+ G++I + AD V +W T + H
Sbjct: 259 PKERCVKIFQGNVHNFEKNLLRCSWSADGSKIAAGSADRFVYIWDTTTRRIVYKLPGHAG 318
Query: 622 KIWALAVGKKTEMFATGGSD 641
+ +A + + +G SD
Sbjct: 319 SVNEVAFHPEEPIVLSGSSD 338
Score = 170 (64.9 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 43/156 (27%), Positives = 76/156 (48%)
Query: 28 SSDGSFIACACGESINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRVW 87
+SD I+ I + DL + +++G D++T L+LS D L S+ +RVW
Sbjct: 194 TSD-QIISGGIDNDIKVWDLRQNKLIYSMQGHGDSVTGLSLSADGSYLLSNSMDNSVRVW 252
Query: 88 DLSTL----KCLRSWKG--HDGPAIGMACHPS--GGLLATAGADRKVLVWDVDGGFCTHY 139
D+ +C++ ++G H+ + C S G +A ADR V +WD +
Sbjct: 253 DIRPFAPKERCVKIFQGNVHNFEKNLLRCSWSADGSKIAAGSADRFVYIWDTTTRRIVYK 312
Query: 140 FKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDL 175
GH G V+ + FHP+ + ++ SGS D + + ++
Sbjct: 313 LPGHAGSVNEVAFHPE--EPIVLSGSSDKRLYIGEI 346
Score = 163 (62.4 bits), Expect = 7.0e-09, P = 7.0e-09
Identities = 49/196 (25%), Positives = 85/196 (43%)
Query: 31 GSFIACACGESINIVDLSNASIKSTIEGGSDTITALALSPDDKL--LFSSGHSREIRVWD 88
G +AC G V L + K+++ +T L+++ +D + S G +I+VWD
Sbjct: 153 GPQLACT-GSDDGTVKLWDIRKKASVHTFQNTYQVLSVTFNDTSDQIISGGIDNDIKVWD 211
Query: 89 LSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDV----DGGFCTHYFKG-- 142
L K + S +GH G++ G L + D V VWD+ C F+G
Sbjct: 212 LRQNKLIYSMQGHGDSVTGLSLSADGSYLLSNSMDNSVRVWDIRPFAPKERCVKIFQGNV 271
Query: 143 HKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGST 202
H + + D S + +GS D V +WD ++ V L H V +A +
Sbjct: 272 HNFEKNLLRCSWSADGSKIAAGSADRFVYIWDTTTRRIVYKLPGHAGSVNEVAFHPEEPI 331
Query: 203 LISAGRDKVVNLWDLR 218
++S DK + + +++
Sbjct: 332 VLSGSSDKRLYIGEIQ 347
Score = 138 (53.6 bits), Expect = 7.7e-26, Sum P(2) = 7.7e-26
Identities = 37/152 (24%), Positives = 71/152 (46%)
Query: 414 IVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDG 473
I++G DN +++WD + GH +V ++ S ++L+S S D++++VW
Sbjct: 198 IISGGIDNDIKVWDLRQNKLIYSMQGHGDSVTGLSLSAD-GSYLLSNSMDNSVRVWDIRP 256
Query: 474 LSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFR 533
+ E+ + + + V K++ + + + S + GS DR +W V
Sbjct: 257 FAPK-ERCVKI-FQGNVHNFEKNLLRCSWSADGSKIAAGSADRFVYIWDTTTRRIVYKLP 314
Query: 534 GHKRGIWSVEFSPVDQVVITASGDKTIKIWSI 565
GH + V F P + +V++ S DK + I I
Sbjct: 315 GHAGSVNEVAFHPEEPIVLSGSSDKRLYIGEI 346
Score = 131 (51.2 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 30/122 (24%), Positives = 56/122 (45%)
Query: 529 VVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSC--LKTFEGHTSSVLRASF 586
++ GH+ ++ +F P + ++ D+ I +W++ G C T +GH+ +V+ +
Sbjct: 49 IMLLSGHEGEVYCCKFHPNGATLASSGYDRLILMWNVY-GDCENYATLKGHSGAVMELHY 107
Query: 587 LTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFA-TGGSDALVN 645
T G+ + S D V +W TGE + H + + ++ A TG D V
Sbjct: 108 NTDGSLLFSASTDKTVCVWDSETGERVKRLKGHTSFVNSCFPARRGPQLACTGSDDGTVK 167
Query: 646 LW 647
LW
Sbjct: 168 LW 169
>SGD|S000000668 [details] [associations]
symbol:RSA4 "WD-repeat protein involved in ribosome
biogenesis" species:4932 "Saccharomyces cerevisiae" [GO:0005730
"nucleolus" evidence=IEA;IDA] [GO:0005840 "ribosome" evidence=IDA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000027 "ribosomal large
subunit assembly" evidence=IMP] [GO:0003674 "molecular_function"
evidence=ND] [GO:0042254 "ribosome biogenesis" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
SGD:S000000668 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:X59720 EMBL:BK006937
GeneTree:ENSGT00690000102167 GO:GO:0000027 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 OrthoDB:EOG4PP1R9 EMBL:AY692666
PIR:S19487 RefSeq:NP_009997.2 ProteinModelPortal:P25382 SMR:P25382
DIP:DIP-5365N IntAct:P25382 MINT:MINT-531710 STRING:P25382
PaxDb:P25382 PeptideAtlas:P25382 EnsemblFungi:YCR072C GeneID:850435
KEGG:sce:YCR072C CYGD:YCR072c NextBio:966027 Genevestigator:P25382
GermOnline:YCR072C Uniprot:P25382
Length = 515
Score = 302 (111.4 bits), Expect = 6.5e-24, P = 6.5e-24
Identities = 77/281 (27%), Positives = 137/281 (48%)
Query: 369 LAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDS 428
LA ++ ++++D S C Y ++GH+ V C+ G+ L+ +GS D +VR+WD
Sbjct: 251 LASSSKDGTIKIWDTVSRVCQYTMSGHTNSVSCVKW----GGQGLLYSGSHDRTVRVWDI 306
Query: 429 ESRC-CVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAK 487
S+ C+ + H V N L S S+D+ +++ +FD P + K
Sbjct: 307 NSQGRCINILKSHAHWV----------NHL-SLSTDYALRIGAFDHTGKKPSTPEEAQKK 355
Query: 488 AVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWR-LPDLVSVVTFRGHKRGIWSVEFSP 546
A+ + K ++ ++ T S D T +W L + GH++ + V FSP
Sbjct: 356 AL-ENYEKICKKNG--NSEEMMVTASDDYTMFLWNPLKSTKPIARMTGHQKLVNHVAFSP 412
Query: 547 VDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWT 606
+ +++AS D +IK+W DG + TF GH +SV + ++ + +VSC D +K+W
Sbjct: 413 DGRYIVSASFDNSIKLWDGRDGKFISTFRGHVASVYQVAWSSDCRLLVSCSKDTTLKVWD 472
Query: 607 VRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLW 647
VRT + H+D+++ + + +GG D +V LW
Sbjct: 473 VRTRKLSVDLPGHKDEVYTVDWSVDGKRVCSGGKDKMVRLW 513
Score = 209 (78.6 bits), Expect = 1.5e-13, P = 1.5e-13
Identities = 102/399 (25%), Positives = 165/399 (41%)
Query: 142 GHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGS 201
GH + F P T S + +G+ D T R+WD + + TL H++ V ++ + DG
Sbjct: 141 GHGSTILCSAFAPHTS-SRMVTGAGDNTARIWDCDTQTPMHTLKGHYNWVLCVSWSPDGE 199
Query: 202 TLISAGRDKVVNLWD----------LRDYSCKLTVPTYEMVEAVCAIPPGSAFDSFLSSY 251
+ + D + LWD LR +S +T ++E + V PGS SS
Sbjct: 200 VIATGSMDNTIRLWDPKSGQCLGDALRGHSKWITSLSWEPIHLV---KPGSK-PRLASSS 255
Query: 252 NQQTIKK-KRRSLEIHFITVGERGIVRM--WNADSACLYEQKSSDVTISFEMDDSKRGFT 308
TIK S + G V W LY S D T+ D + +G
Sbjct: 256 KDGTIKIWDTVSRVCQYTMSGHTNSVSCVKWGGQGL-LYSG-SHDRTVRV-WDINSQG-R 311
Query: 309 AATVLPSNQ---GLLCVTADQQLLLYTTVEVPEKKM--ELILSKRLVGYNEEILDLKFLG 363
+L S+ L ++ D L + +K E K L Y E+I K G
Sbjct: 312 CINILKSHAHWVNHLSLSTDYALRIGAFDHTGKKPSTPEEAQKKALENY-EKIC--KKNG 368
Query: 364 EEEQYLAVATNIEQVQVYD-LSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNS 422
E+ + A++ + +++ L S + GH ++V + A S IV+ S DNS
Sbjct: 369 NSEEMMVTASDDYTMFLWNPLKSTKPIARMTGHQKLV---NHVAFSPDGRYIVSASFDNS 425
Query: 423 VRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPM 482
++LWD + GH+ +V VA+S + LVS S D T+KVW D
Sbjct: 426 IKLWDGRDGKFISTFRGHVASVYQVAWSSDCR-LLVSCSKDTTLKVW-------DVR--- 474
Query: 483 NLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVW 521
K + H ++ ++ + + VC+G +D+ +W
Sbjct: 475 TRKLSVDLPGHKDEVYTVDWSVDGKRVCSGGKDKMVRLW 513
Score = 198 (74.8 bits), Expect = 2.1e-25, Sum P(2) = 2.1e-25
Identities = 47/172 (27%), Positives = 81/172 (47%)
Query: 54 STIEGGSDTITALALSP--DDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACH 111
S I G TI A +P +++ +G + R+WD T + + KGH + ++
Sbjct: 137 SAIAGHGSTILCSAFAPHTSSRMVTGAGDNTA-RIWDCDTQTPMHTLKGHYNWVLCVSWS 195
Query: 112 PSGGLLATAGADRKVLVWDVDGGFCT-HYFKGHKGVVSSILFHP-----DTDKSLLFSGS 165
P G ++AT D + +WD G C +GH ++S+ + P K L S S
Sbjct: 196 PDGEVIATGSMDNTIRLWDPKSGQCLGDALRGHSKWITSLSWEPIHLVKPGSKPRLASSS 255
Query: 166 DDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDL 217
D T+++WD +++ C T+ H + V+ + G L S D+ V +WD+
Sbjct: 256 KDGTIKIWDTVSRVCQYTMSGHTNSVSCVKWGGQG-LLYSGSHDRTVRVWDI 306
Score = 193 (73.0 bits), Expect = 8.5e-12, P = 8.5e-12
Identities = 48/172 (27%), Positives = 82/172 (47%)
Query: 485 KAKAVVAAHGKDINSLAVAPN-DSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVE 543
++ + +A HG I A AP+ S + TG+ D TA +W + T +GH + V
Sbjct: 134 RSSSAIAGHGSTILCSAFAPHTSSRMVTGAGDNTARIWDCDTQTPMHTLKGHYNWVLCVS 193
Query: 544 FSPVDQVVITASGDKTIKIWSISDGSCL-KTFEGHTSSVLRASF----LTR-GAQ--IVS 595
+SP +V+ T S D TI++W G CL GH+ + S+ L + G++ + S
Sbjct: 194 WSPDGEVIATGSMDNTIRLWDPKSGQCLGDALRGHSKWITSLSWEPIHLVKPGSKPRLAS 253
Query: 596 CGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLW 647
DG +K+W + C T H + + + G + +++ G D V +W
Sbjct: 254 SSKDGTIKIWDTVSRVCQYTMSGHTNSVSCVKWGGQGLLYS-GSHDRTVRVW 304
Score = 185 (70.2 bits), Expect = 6.4e-11, P = 6.4e-11
Identities = 66/262 (25%), Positives = 114/262 (43%)
Query: 389 SYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVA 448
S +AGH +LC +S ++ VTG+ DN+ R+WD +++ + GH V V+
Sbjct: 136 SSAIAGHGSTILCSAFAPHTSSRM--VTGAGDNTARIWDCDTQTPMHTLKGHYNWVLCVS 193
Query: 449 FSKKLQNFLVSGSSDHTIKVWSFDGLSDDA-EQPMNLKAKAVVAAHGKDINSLAVAPNDS 507
+S + + +GS D+TI++W D S + +K + + + I+ +
Sbjct: 194 WSPDGE-VIATGSMDNTIRLW--DPKSGQCLGDALRGHSKWITSLSWEPIHLVKPGSKPR 250
Query: 508 LVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSI-S 566
L + S+D T +W V T GH + V++ ++ + S D+T+++W I S
Sbjct: 251 LA-SSSKDGTIKIWDTVSRVCQYTMSGHTNSVSCVKWGG-QGLLYSGSHDRTVRVWDINS 308
Query: 567 DGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWAL 626
G C+ + H V S T A + K T + A + +E KI
Sbjct: 309 QGRCINILKSHAHWVNHLSLSTDYALRIGAFDHTGKKPSTPEEAQKKAL-ENYE-KI-CK 365
Query: 627 AVGKKTEMFATGGSDALVNLWH 648
G EM T D + LW+
Sbjct: 366 KNGNSEEMMVTASDDYTMFLWN 387
Score = 175 (66.7 bits), Expect = 7.8e-23, Sum P(2) = 7.8e-23
Identities = 46/172 (26%), Positives = 84/172 (48%)
Query: 44 IVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLR-SWKGHD 102
I D + T++G + + ++ SPD +++ + IR+WD + +CL + +GH
Sbjct: 170 IWDCDTQTPMHTLKGHYNWVLCVSWSPDGEVIATGSMDNTIRLWDPKSGQCLGDALRGHS 229
Query: 103 GPAIGMACHP-------SGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPD 155
++ P S LA++ D + +WD C + GH VS + +
Sbjct: 230 KWITSLSWEPIHLVKPGSKPRLASSSKDGTIKIWDTVSRVCQYTMSGHTNSVSCVKWG-- 287
Query: 156 TDKSLLFSGSDDATVRVWDLLAK-KCVATLDKHFSRVTSMAITSDGSTLISA 206
+ LL+SGS D TVRVWD+ ++ +C+ L H V +++++D + I A
Sbjct: 288 -GQGLLYSGSHDRTVRVWDINSQGRCINILKSHAHWVNHLSLSTDYALRIGA 338
Score = 171 (65.3 bits), Expect = 2.1e-25, Sum P(2) = 2.1e-25
Identities = 40/154 (25%), Positives = 75/154 (48%)
Query: 454 QNFLVSGSSDHTIKVWSFDGLSDDAEQPM-NLKAKAVVAAHGKDINSLAVAPNDSLVCTG 512
+ +V+ S D+T+ +W+ P+ + K A + H K +N +A +P+ + +
Sbjct: 371 EEMMVTASDDYTMFLWN----------PLKSTKPIARMTGHQKLVNHVAFSPDGRYIVSA 420
Query: 513 SQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLK 572
S D + +W D + TFRGH ++ V +S +++++ S D T+K+W +
Sbjct: 421 SFDNSIKLWDGRDGKFISTFRGHVASVYQVAWSSDCRLLVSCSKDTTLKVWDVRTRKLSV 480
Query: 573 TFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWT 606
GH V + G ++ S G D +V+LWT
Sbjct: 481 DLPGHKDEVYTVDWSVDGKRVCSGGKDKMVRLWT 514
Score = 170 (64.9 bits), Expect = 2.8e-09, P = 2.8e-09
Identities = 42/146 (28%), Positives = 73/146 (50%)
Query: 72 DKLLFSSGHSREIRVWD-LSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWD 130
++++ ++ + +W+ L + K + GH +A P G + +A D + +WD
Sbjct: 371 EEMMVTASDDYTMFLWNPLKSTKPIARMTGHQKLVNHVAFSPDGRYIVSASFDNSIKLWD 430
Query: 131 V-DGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFS 189
DG F + F+GH V + + +D LL S S D T++VWD+ +K L H
Sbjct: 431 GRDGKFIST-FRGHVASVYQVAW--SSDCRLLVSCSKDTTLKVWDVRTRKLSVDLPGHKD 487
Query: 190 RVTSMAITSDGSTLISAGRDKVVNLW 215
V ++ + DG + S G+DK+V LW
Sbjct: 488 EVYTVDWSVDGKRVCSGGKDKMVRLW 513
>MGI|MGI:1916794 [details] [associations]
symbol:Wdr5b "WD repeat domain 5B" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1916794 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
EMBL:EF011616 EMBL:AK009247 EMBL:AK149554 EMBL:AK165100
EMBL:BC064045 IPI:IPI00110312 RefSeq:NP_081389.1 UniGene:Mm.37802
ProteinModelPortal:Q9D7H2 SMR:Q9D7H2 PhosphoSite:Q9D7H2
PRIDE:Q9D7H2 Ensembl:ENSMUST00000042203 GeneID:69544 KEGG:mmu:69544
UCSC:uc007zcc.1 CTD:54554 HOVERGEN:HBG055117 InParanoid:Q9D7H2
OMA:SAACHPT OrthoDB:EOG49S687 NextBio:329734 Bgee:Q9D7H2
CleanEx:MM_WDR5B Genevestigator:Q9D7H2 Uniprot:Q9D7H2
Length = 328
Score = 296 (109.3 bits), Expect = 2.8e-25, P = 2.8e-25
Identities = 92/328 (28%), Positives = 149/328 (45%)
Query: 326 QQLLLYTTVEVPEKKMELILSKRLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSS 385
Q LL E +K L L G++ I +KF E +LA + + ++
Sbjct: 12 QSLLSAPRREEEPQKPNYALRLTLAGHSAAISSVKFSPNGE-WLASSAADALIIIWGAYD 70
Query: 386 MSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVG 445
+C L GHS L + A SS +V+ S D ++++WD S C+ GH V
Sbjct: 71 GNCKKTLYGHS---LEISDVAWSSDSSRLVSASDDKTLKVWDMRSGKCLKTLKGHSDFVF 127
Query: 446 AVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPN 505
F+ N +VSGS D ++K+W + + LK ++AH I+++ N
Sbjct: 128 CCDFNPP-SNLIVSGSFDESVKIW-------EVKTGKCLKT---LSAHSDPISAVNFNCN 176
Query: 506 DSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWS-VEFSPVDQVVITASGDKTIKIWS 564
SL+ +GS D +W + T S V+FSP + ++TA+ D T+K+W
Sbjct: 177 GSLIVSGSYDGLCRIWDAASGQCLRTLADEGNPPVSFVKFSPNGKYILTATLDNTLKLWD 236
Query: 565 ISDGSCLKTFEGHTSS--VLRASFLTRGAQ-IVSCGADGLVKLWTVRTGECIATYDKHED 621
S G CLKT+ GH + L ASF G + +VS D +V +W ++T E + H D
Sbjct: 237 YSRGRCLKTYTGHKNEKYCLFASFSVTGRKWVVSGSEDNMVYIWNLQTKEIVQRLQGHTD 296
Query: 622 KIWALAVGKKTEMFATGG--SDALVNLW 647
+ + A + A+ +D + +W
Sbjct: 297 VVISAACHPTKNIIASAALENDKTIKVW 324
Score = 246 (91.7 bits), Expect = 6.8e-20, P = 6.8e-20
Identities = 56/200 (28%), Positives = 101/200 (50%)
Query: 28 SSDGSFIACACGESINIV-DLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRV 86
S +G ++A + +++ I+ + + K T+ G S I+ +A S D L S+ + ++V
Sbjct: 48 SPNGEWLASSAADALIIIWGAYDGNCKKTLYGHSLEISDVAWSSDSSRLVSASDDKTLKV 107
Query: 87 WDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGV 146
WD+ + KCL++ KGH +P L+ + D V +W+V G C H
Sbjct: 108 WDMRSGKCLKTLKGHSDFVFCCDFNPPSNLIVSGSFDESVKIWEVKTGKCLKTLSAHSDP 167
Query: 147 VSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATL-DKHFSRVTSMAITSDGSTLIS 205
+S++ F+ + SL+ SGS D R+WD + +C+ TL D+ V+ + + +G +++
Sbjct: 168 ISAVNFN--CNGSLIVSGSYDGLCRIWDAASGQCLRTLADEGNPPVSFVKFSPNGKYILT 225
Query: 206 AGRDKVVNLWDLRDYSCKLT 225
A D + LWD C T
Sbjct: 226 ATLDNTLKLWDYSRGRCLKT 245
Score = 229 (85.7 bits), Expect = 7.8e-17, P = 7.8e-17
Identities = 50/178 (28%), Positives = 87/178 (48%)
Query: 49 NASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGM 108
N +++ T+ G S I+++ SP+ + L SS I +W C ++ GH +
Sbjct: 28 NYALRLTLAGHSAAISSVKFSPNGEWLASSAADALIIIWGAYDGNCKKTLYGHSLEISDV 87
Query: 109 ACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDA 168
A L +A D+ + VWD+ G C KGH V F+P ++ L+ SGS D
Sbjct: 88 AWSSDSSRLVSASDDKTLKVWDMRSGKCLKTLKGHSDFVFCCDFNPPSN--LIVSGSFDE 145
Query: 169 TVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTV 226
+V++W++ KC+ TL H ++++ +GS ++S D + +WD C T+
Sbjct: 146 SVKIWEVKTGKCLKTLSAHSDPISAVNFNCNGSLIVSGSYDGLCRIWDAASGQCLRTL 203
Score = 195 (73.7 bits), Expect = 1.3e-12, P = 1.3e-12
Identities = 37/128 (28%), Positives = 66/128 (51%)
Query: 524 PDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLR 583
P+ +T GH I SV+FSP + + +++ D I IW DG+C KT GH+ +
Sbjct: 27 PNYALRLTLAGHSAAISSVKFSPNGEWLASSAADALIIIWGAYDGNCKKTLYGHSLEISD 86
Query: 584 ASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDAL 643
++ + +++VS D +K+W +R+G+C+ T H D ++ + + +G D
Sbjct: 87 VAWSSDSSRLVSASDDKTLKVWDMRSGKCLKTLKGHSDFVFCCDFNPPSNLIVSGSFDES 146
Query: 644 VNLWHDST 651
V +W T
Sbjct: 147 VKIWEVKT 154
Score = 182 (69.1 bits), Expect = 4.1e-11, P = 4.1e-11
Identities = 39/137 (28%), Positives = 67/137 (48%)
Query: 100 GHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKS 159
GH + P+G LA++ AD +++W G C GH +S + + +D S
Sbjct: 37 GHSAAISSVKFSPNGEWLASSAADALIIIWGAYDGNCKKTLYGHSLEISDVAW--SSDSS 94
Query: 160 LLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRD 219
L S SDD T++VWD+ + KC+ TL H V + ++S D+ V +W+++
Sbjct: 95 RLVSASDDKTLKVWDMRSGKCLKTLKGHSDFVFCCDFNPPSNLIVSGSFDESVKIWEVKT 154
Query: 220 YSCKLTVPTY-EMVEAV 235
C T+ + + + AV
Sbjct: 155 GKCLKTLSAHSDPISAV 171
Score = 172 (65.6 bits), Expect = 5.7e-10, P = 5.7e-10
Identities = 66/302 (21%), Positives = 122/302 (40%)
Query: 142 GHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGS 201
GH +SS+ F P+ + L S + DA + +W C TL H ++ +A +SD S
Sbjct: 37 GHSAAISSVKFSPNGE--WLASSAADALIIIWGAYDGNCKKTLYGHSLEISDVAWSSDSS 94
Query: 202 TLISAGRDKVVNLWDLRDYSCKLTVPTYEMVEAVCAI-PPGS-----AFDSFLSSYNQQT 255
L+SA DK + +WD+R C T+ + C PP + +FD + + +T
Sbjct: 95 RLVSASDDKTLKVWDMRSGKCLKTLKGHSDFVFCCDFNPPSNLIVSGSFDESVKIWEVKT 154
Query: 256 IKKKRRSLEIHFITVGE-----RG-IVRMWNADSACLYEQKSSDVTISFEMDDSKRGFTA 309
K ++L H + G ++ + D C +S + D+ +
Sbjct: 155 -GKCLKTLSAHSDPISAVNFNCNGSLIVSGSYDGLCRIWDAASGQCLRTLADEGNPPVSF 213
Query: 310 ATVLPSNQGLLCVTADQQLLLYTTVEVPEKKMELILSKRLVGYNEE--ILDLKFLGEEEQ 367
P+ + +L T D L L+ + L K G+ E L F +
Sbjct: 214 VKFSPNGKYILTATLDNTLKLW------DYSRGRCL-KTYTGHKNEKYCLFASFSVTGRK 266
Query: 368 YLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWD 427
++ + V +++L + L GH+++V+ C + I D ++++W
Sbjct: 267 WVVSGSEDNMVYIWNLQTKEIVQRLQGHTDVVISA-ACHPTKNIIASAALENDKTIKVWS 325
Query: 428 SE 429
S+
Sbjct: 326 SD 327
Score = 155 (59.6 bits), Expect = 4.7e-08, P = 4.7e-08
Identities = 58/226 (25%), Positives = 104/226 (46%)
Query: 347 KRLVGYNEEILDLKFLGEEEQYLAVATNI-EQVQVYDLSSMSCSYVLAGHSEIVLCLD-T 404
K L G+++ + F L V+ + E V+++++ + C L+ HS+ + ++
Sbjct: 117 KTLKGHSDFVFCCDF--NPPSNLIVSGSFDESVKIWEVKTGKCLKTLSAHSDPISAVNFN 174
Query: 405 CALSSGKILIVTGSKDNSVRLWDSES-RCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSD 463
C +G LIV+GS D R+WD+ S +C + V V FS ++++ + D
Sbjct: 175 C---NGS-LIVSGSYDGLCRIWDAASGQCLRTLADEGNPPVSFVKFSPN-GKYILTATLD 229
Query: 464 HTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRL 523
+T+K+W + + K + A S +V +V +GS+D +W L
Sbjct: 230 NTLKLWDYSRGRCLKTYTGHKNEKYCLFA------SFSVTGRKWVV-SGSEDNMVYIWNL 282
Query: 524 PDLVSVVTFRGHKRGIWSVEFSPVDQVVITAS--GDKTIKIWSISD 567
V +GH + S P ++ +A+ DKTIK+WS SD
Sbjct: 283 QTKEIVQRLQGHTDVVISAACHPTKNIIASAALENDKTIKVWS-SD 327
Score = 130 (50.8 bits), Expect = 2.9e-05, P = 2.9e-05
Identities = 35/151 (23%), Positives = 73/151 (48%)
Query: 30 DGSFIACACGESI-NIVDLSNASIKSTI-EGGSDTITALALSPDDKLLFSSGHSREIRVW 87
+GS I + + I D ++ T+ + G+ ++ + SP+ K + ++ +++W
Sbjct: 176 NGSLIVSGSYDGLCRIWDAASGQCLRTLADEGNPPVSFVKFSPNGKYILTATLDNTLKLW 235
Query: 88 DLSTLKCLRSWKGHDGP--AIGMACHPSGGLLATAGA-DRKVLVWDVDGGFCTHYFKGHK 144
D S +CL+++ GH + + +G +G+ D V +W++ +GH
Sbjct: 236 DYSRGRCLKTYTGHKNEKYCLFASFSVTGRKWVVSGSEDNMVYIWNLQTKEIVQRLQGHT 295
Query: 145 GVVSSILFHPDTDKSLLFSGS--DDATVRVW 173
VV S HP K+++ S + +D T++VW
Sbjct: 296 DVVISAACHPT--KNIIASAALENDKTIKVW 324
>TAIR|locus:2140215 [details] [associations]
symbol:WDR5b "AT4G02730" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002687 GenomeReviews:CT486007_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:AL161495 HSSP:P16649 GO:GO:0080008 EMBL:AC004044 KO:K14963
HOGENOM:HOG000091642 ProtClustDB:CLSN2684254 EMBL:AF439825
EMBL:AY088121 EMBL:AY125558 IPI:IPI00523608 PIR:G85034
RefSeq:NP_192182.1 UniGene:At.26627 ProteinModelPortal:Q9SY00
SMR:Q9SY00 EnsemblPlants:AT4G02730.1 GeneID:828189
KEGG:ath:AT4G02730 TAIR:At4g02730 InParanoid:Q9SY00 OMA:ETIRIWE
PhylomeDB:Q9SY00 ArrayExpress:Q9SY00 Genevestigator:Q9SY00
Uniprot:Q9SY00
Length = 333
Score = 249 (92.7 bits), Expect = 3.2e-20, P = 3.2e-20
Identities = 82/308 (26%), Positives = 145/308 (47%)
Query: 347 KRLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCA 406
K L G+ I +KF + LA A+ + + ++ ++ S + GHS + L A
Sbjct: 37 KTLEGHTAAISCVKF-SNDGNLLASASVDKTMILWSATNYSLIHRYEGHSSGISDL---A 92
Query: 407 LSSGKILIVTGSKDNSVRLWDSESRC-CVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHT 465
SS + S D ++R+WD+ S C+ V GH V V F+ N +VSGS D T
Sbjct: 93 WSSDSHYTCSASDDCTLRIWDARSPYECLKVLRGHTNFVFCVNFNPP-SNLIVSGSFDET 151
Query: 466 IKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPD 525
I++W + K ++ AH I+S+ + SL+ + S D + +W +
Sbjct: 152 IRIW----------EVKTGKCVRMIKAHSMPISSVHFNRDGSLIVSASHDGSCKIWDAKE 201
Query: 526 LVSVVTFRGHKRGIWS-VEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSV--L 582
+ T K S +FSP + ++ A+ D T+K+ + + G LK + GHT+ V +
Sbjct: 202 GTCLKTLIDDKSPAVSFAKFSPNGKFILVATLDSTLKLSNYATGKFLKVYTGHTNKVFCI 261
Query: 583 RASF-LTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGK-KTEMFATGGS 640
++F +T G IVS D V LW ++ + + H D + +++ + E+ ++G
Sbjct: 262 TSAFSVTNGKYIVSGSEDNCVYLWDLQARNILQRLEGHTDAVISVSCHPVQNEISSSGNH 321
Query: 641 -DALVNLW 647
D + +W
Sbjct: 322 LDKTIRIW 329
Score = 228 (85.3 bits), Expect = 1.3e-16, P = 1.3e-16
Identities = 66/216 (30%), Positives = 101/216 (46%)
Query: 439 GHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDIN 498
GH A+ V FS N L S S D T+ +WS S L + H I+
Sbjct: 41 GHTAAISCVKFSND-GNLLASASVDKTMILWSATNYS--------LIHR--YEGHSSGIS 89
Query: 499 SLAVAPNDSLVCTGSQDRTACVW--RLP-DLVSVVTFRGHKRGIWSVEFSPVDQVVITAS 555
LA + + C+ S D T +W R P + + V+ RGH ++ V F+P ++++ S
Sbjct: 90 DLAWSSDSHYTCSASDDCTLRIWDARSPYECLKVL--RGHTNFVFCVNFNPPSNLIVSGS 147
Query: 556 GDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIAT 615
D+TI+IW + G C++ + H+ + F G+ IVS DG K+W + G C+ T
Sbjct: 148 FDETIRIWEVKTGKCVRMIKAHSMPISSVHFNRDGSLIVSASHDGSCKIWDAKEGTCLKT 207
Query: 616 YDKHEDKIWALAVGKKTEMFATGGSDALVNLWHDST 651
+DK A++ K F+ G LV DST
Sbjct: 208 LI--DDKSPAVSFAK----FSPNGKFILVATL-DST 236
Score = 225 (84.3 bits), Expect = 3.0e-25, Sum P(2) = 3.0e-25
Identities = 46/173 (26%), Positives = 84/173 (48%)
Query: 55 TIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPSG 114
T+EG + I+ + S D LL S+ + + +W + + ++GH +A
Sbjct: 38 TLEGHTAAISCVKFSNDGNLLASASVDKTMILWSATNYSLIHRYEGHSSGISDLAWSSDS 97
Query: 115 GLLATAGADRKVLVWDVDGGF-CTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVW 173
+A D + +WD + C +GH V + F+P ++ L+ SGS D T+R+W
Sbjct: 98 HYTCSASDDCTLRIWDARSPYECLKVLRGHTNFVFCVNFNPPSN--LIVSGSFDETIRIW 155
Query: 174 DLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTV 226
++ KCV + H ++S+ DGS ++SA D +WD ++ +C T+
Sbjct: 156 EVKTGKCVRMIKAHSMPISSVHFNRDGSLIVSASHDGSCKIWDAKEGTCLKTL 208
Score = 213 (80.0 bits), Expect = 1.4e-23, Sum P(2) = 1.4e-23
Identities = 55/190 (28%), Positives = 89/190 (46%)
Query: 28 SSDGSFIACACGESINIV-DLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRV 86
S+DG+ +A A + I+ +N S+ EG S I+ LA S D S+ +R+
Sbjct: 52 SNDGNLLASASVDKTMILWSATNYSLIHRYEGHSSGISDLAWSSDSHYTCSASDDCTLRI 111
Query: 87 WDL-STLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKG 145
WD S +CL+ +GH + +P L+ + D + +W+V G C K H
Sbjct: 112 WDARSPYECLKVLRGHTNFVFCVNFNPPSNLIVSGSFDETIRIWEVKTGKCVRMIKAHSM 171
Query: 146 VVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMA-ITSDGSTLI 204
+SS+ H + D SL+ S S D + ++WD C+ TL S S A + +G ++
Sbjct: 172 PISSV--HFNRDGSLIVSASHDGSCKIWDAKEGTCLKTLIDDKSPAVSFAKFSPNGKFIL 229
Query: 205 SAGRDKVVNL 214
A D + L
Sbjct: 230 VATLDSTLKL 239
Score = 178 (67.7 bits), Expect = 1.2e-10, P = 1.2e-10
Identities = 53/204 (25%), Positives = 90/204 (44%)
Query: 21 GGGPLVVSSDGSFIACACGE-SINIVDL-SNASIKSTIEGGSDTITALALSPDDKLLFSS 78
G L SSD + A + ++ I D S + G ++ + + +P L+ S
Sbjct: 87 GISDLAWSSDSHYTCSASDDCTLRIWDARSPYECLKVLRGHTNFVFCVNFNPPSNLIVSG 146
Query: 79 GHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTH 138
IR+W++ T KC+R K H P + + G L+ +A D +WD G C
Sbjct: 147 SFDETIRIWEVKTGKCVRMIKAHSMPISSVHFNRDGSLIVSASHDGSCKIWDAKEGTCLK 206
Query: 139 YFKGHKG-VVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRV---TSM 194
K VS F P+ K +L + + D+T+++ + K + H ++V TS
Sbjct: 207 TLIDDKSPAVSFAKFSPN-GKFILVA-TLDSTLKLSNYATGKFLKVYTGHTNKVFCITSA 264
Query: 195 AITSDGSTLISAGRDKVVNLWDLR 218
++G ++S D V LWDL+
Sbjct: 265 FSVTNGKYIVSGSEDNCVYLWDLQ 288
Score = 162 (62.1 bits), Expect = 8.0e-09, P = 8.0e-09
Identities = 51/195 (26%), Positives = 87/195 (44%)
Query: 25 LVVSSDGSFIACACGESINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREI 84
L+VS GSF E+I I ++ I+ S I+++ + D L+ S+ H
Sbjct: 142 LIVS--GSF-----DETIRIWEVKTGKCVRMIKAHSMPISSVHFNRDGSLIVSASHDGSC 194
Query: 85 RVWDLSTLKCLRSWKGHDGPAIGMA-CHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGH 143
++WD CL++ PA+ A P+G + A D + + + G + GH
Sbjct: 195 KIWDAKEGTCLKTLIDDKSPAVSFAKFSPNGKFILVATLDSTLKLSNYATGKFLKVYTGH 254
Query: 144 KGVVSSILF-HPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGST 202
V I T+ + SGS+D V +WDL A+ + L+ H V S++ +
Sbjct: 255 TNKVFCITSAFSVTNGKYIVSGSEDNCVYLWDLQARNILQRLEGHTDAVISVSCHPVQNE 314
Query: 203 LISAGR--DKVVNLW 215
+ S+G DK + +W
Sbjct: 315 ISSSGNHLDKTIRIW 329
Score = 159 (61.0 bits), Expect = 5.8e-17, Sum P(2) = 5.8e-17
Identities = 32/138 (23%), Positives = 66/138 (47%)
Query: 95 LRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHP 154
L++ +GH + G LLA+A D+ +++W H ++GH +S + +
Sbjct: 36 LKTLEGHTAAISCVKFSNDGNLLASASVDKTMILWSATNYSLIHRYEGHSSGISDLAWSS 95
Query: 155 DTDKSLLFSGSDDATVRVWDLLAK-KCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVN 213
D+ + S SDD T+R+WD + +C+ L H + V + + ++S D+ +
Sbjct: 96 DSHYTC--SASDDCTLRIWDARSPYECLKVLRGHTNFVFCVNFNPPSNLIVSGSFDETIR 153
Query: 214 LWDLRDYSCKLTVPTYEM 231
+W+++ C + + M
Sbjct: 154 IWEVKTGKCVRMIKAHSM 171
Score = 155 (59.6 bits), Expect = 4.9e-08, P = 4.9e-08
Identities = 77/347 (22%), Positives = 138/347 (39%)
Query: 100 GHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKS 159
G +G + G+A S G T+G V ++ T +GH +S + F D +
Sbjct: 4 GGNGTSNGVANANSTGNAGTSG---NVPIYKPYRHLKT--LEGHTAAISCVKF--SNDGN 56
Query: 160 LLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRD 219
LL S S D T+ +W + + H S ++ +A +SD SA D + +WD R
Sbjct: 57 LLASASVDKTMILWSATNYSLIHRYEGHSSGISDLAWSSDSHYTCSASDDCTLRIWDARS 116
Query: 220 -YSC-KLTVPTYEMVEAVCAIPPGS-----AFDSFLSSYNQQTIKK----KRRSLEIHFI 268
Y C K+ V V PP + +FD + + +T K K S+ I +
Sbjct: 117 PYECLKVLRGHTNFVFCVNFNPPSNLIVSGSFDETIRIWEVKTGKCVRMIKAHSMPISSV 176
Query: 269 TVGERG-IVRMWNADSACLYEQKSSDVTISFEMDDSKRGFTAATVLPSNQGLLCVTADQQ 327
G ++ + D +C + +DD + A P+ + +L T D
Sbjct: 177 HFNRDGSLIVSASHDGSCKIWDAKEGTCLKTLIDDKSPAVSFAKFSPNGKFILVATLDST 236
Query: 328 LLL--YTTVEVPEKKMELILSKRLVGYNEEILDLK--FLGEEEQYLAVATNIEQVQVYDL 383
L L Y T + K G+ ++ + F +Y+ + V ++DL
Sbjct: 237 LKLSNYATGK---------FLKVYTGHTNKVFCITSAFSVTNGKYIVSGSEDNCVYLWDL 287
Query: 384 SSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSES 430
+ + L GH++ V+ + +C +I D ++R+W ++
Sbjct: 288 QARNILQRLEGHTDAVISV-SCHPVQNEISSSGNHLDKTIRIWKQDA 333
Score = 143 (55.4 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 30/122 (24%), Positives = 59/122 (48%)
Query: 531 TFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRG 590
T GH I V+FS ++ +AS DKT+ +WS ++ S + +EGH+S + ++ +
Sbjct: 38 TLEGHTAAISCVKFSNDGNLLASASVDKTMILWSATNYSLIHRYEGHSSGISDLAWSSDS 97
Query: 591 AQIVSCGADGLVKLWTVRTG-ECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLWHD 649
S D +++W R+ EC+ H + ++ + + + +G D + +W
Sbjct: 98 HYTCSASDDCTLRIWDARSPYECLKVLRGHTNFVFCVNFNPPSNLIVSGSFDETIRIWEV 157
Query: 650 ST 651
T
Sbjct: 158 KT 159
Score = 124 (48.7 bits), Expect = 3.0e-25, Sum P(2) = 3.0e-25
Identities = 34/109 (31%), Positives = 62/109 (56%)
Query: 367 QYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTC-ALSSGKILIVTGSKDNSVRL 425
+++ VAT +++ + ++ V GH+ V C+ + ++++GK IV+GS+DN V L
Sbjct: 226 KFILVATLDSTLKLSNYATGKFLKVYTGHTNKVFCITSAFSVTNGKY-IVSGSEDNCVYL 284
Query: 426 WDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSS--DHTIKVWSFD 472
WD ++R + GH AV +V+ +QN + S + D TI++W D
Sbjct: 285 WDLQARNILQRLEGHTDAVISVS-CHPVQNEISSSGNHLDKTIRIWKQD 332
>WB|WBGene00021074 [details] [associations]
symbol:W07E6.2 species:6239 "Caenorhabditis elegans"
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0000003 "reproduction" evidence=IMP]
[GO:0006898 "receptor-mediated endocytosis" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 GO:GO:0005634 GO:GO:0006898 GO:GO:0040007
GO:GO:0040010 GO:GO:0002119 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0000003
GeneTree:ENSGT00690000102167 HSSP:P16649 PRINTS:PR00319
HOGENOM:HOG000091641 KO:K14855 OMA:HFTCKGH InterPro:IPR012972
Pfam:PF08154 EMBL:FO081752 PIR:T33805 RefSeq:NP_493745.1
ProteinModelPortal:Q9TYV3 SMR:Q9TYV3 STRING:Q9TYV3 PaxDb:Q9TYV3
EnsemblMetazoa:W07E6.2.1 EnsemblMetazoa:W07E6.2.2 GeneID:173439
KEGG:cel:CELE_W07E6.2 UCSC:W07E6.2 CTD:173439 WormBase:W07E6.2
InParanoid:Q9TYV3 NextBio:879659 Uniprot:Q9TYV3
Length = 473
Score = 200 (75.5 bits), Expect = 2.0e-24, Sum P(2) = 2.0e-24
Identities = 60/245 (24%), Positives = 113/245 (46%)
Query: 404 TCALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSD 463
TC G+ LI +GS+D +V++W ++ TGH + +A + +D
Sbjct: 241 TCLRWGGEGLIYSGSQDRTVKMWRADDGVMCRNMTGHAHWINTLALN-----------TD 289
Query: 464 HTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRL 523
+ ++ F+ S +P ++ VA + +L +A + LV +GS D T +W
Sbjct: 290 YALRTSCFEP-SKRCIKPDTVEECQKVAQTRYEA-ALEIAGGERLV-SGSDDFTLFMWNP 346
Query: 524 PDLV-SVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVL 582
+ S+ GH + + V FSP + + +AS DK++K+W G L + GH V
Sbjct: 347 KETKQSINRMTGHMQLVNQVVFSPDTRYIASASFDKSVKLWCGRTGKYLASLRGHVGPVY 406
Query: 583 RASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDA 642
+ ++ +VS AD +K++ ++T H D+++ + + +GG D
Sbjct: 407 QVAWSADSRLLVSGSADSTLKVFELKTKSLYYDLPGHGDEVFTVDWSPEGTKVVSGGKDK 466
Query: 643 LVNLW 647
++ LW
Sbjct: 467 VLKLW 471
Score = 168 (64.2 bits), Expect = 9.5e-19, Sum P(2) = 9.5e-19
Identities = 56/240 (23%), Positives = 106/240 (44%)
Query: 413 LIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFD 472
L+ + KD ++ +WD+ V +GH +V + + + + SGS D T+K+W
Sbjct: 209 LLASCGKDGNIFIWDTVQGTVVRCLSGHTASVTCLRWGG--EGLIYSGSQDRTVKMWR-- 264
Query: 473 GLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTF 532
+DD N+ H IN+LA+ + +L + + C+ PD V
Sbjct: 265 --ADDGVMCRNM------TGHAHWINTLALNTDYALRTSCFEPSKRCI--KPDTVEECQK 314
Query: 533 RGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGS-CLKTFEGHTSSVLRASFLTRGA 591
R ++E + +++V + S D T+ +W+ + + GH V + F
Sbjct: 315 VAQTRYEAALEIAGGERLV-SGSDDFTLFMWNPKETKQSINRMTGHMQLVNQVVFSPDTR 373
Query: 592 QIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLWHDST 651
I S D VKLW RTG+ +A+ H ++ +A + + +G +D+ + ++ T
Sbjct: 374 YIASASFDKSVKLWCGRTGKYLASLRGHVGPVYQVAWSADSRLLVSGSADSTLKVFELKT 433
Score = 158 (60.7 bits), Expect = 2.0e-24, Sum P(2) = 2.0e-24
Identities = 42/170 (24%), Positives = 76/170 (44%)
Query: 54 STIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPS 113
++I G + + + SPD + L S + +R+WD+ L + K H + +A P
Sbjct: 99 ASIPGHGEPVISAQFSPDGRGLASGSGDQTMRIWDIELELPLHTCKSHKSWVLCIAWSPD 158
Query: 114 GGLLATAGADRKVLVWDVDGGF-CTHYFKGHKGVVSSILFHP---DTDKSLLFSGSDDAT 169
+A+A + ++ +W+ G K HK ++S+ + P D LL S D
Sbjct: 159 ATKIASACKNGEICIWNAKTGEQIGKTLKRHKQWITSLAWQPMHKDPTCRLLASCGKDGN 218
Query: 170 VRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRD 219
+ +WD + V L H + VT + +G + S +D+ V +W D
Sbjct: 219 IFIWDTVQGTVVRCLSGHTASVTCLRWGGEG-LIYSGSQDRTVKMWRADD 267
Score = 147 (56.8 bits), Expect = 7.9e-07, P = 7.9e-07
Identities = 41/152 (26%), Positives = 73/152 (48%)
Query: 65 ALALSPDDKLLFSSGHSREIRVWD-LSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGAD 123
AL ++ ++L+ S + +W+ T + + GH + P +A+A D
Sbjct: 323 ALEIAGGERLV-SGSDDFTLFMWNPKETKQSINRMTGHMQLVNQVVFSPDTRYIASASFD 381
Query: 124 RKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVAT 183
+ V +W G +GH G V + + D LL SGS D+T++V++L K
Sbjct: 382 KSVKLWCGRTGKYLASLRGHVGPVYQVAW--SADSRLLVSGSADSTLKVFELKTKSLYYD 439
Query: 184 LDKHFSRVTSMAITSDGSTLISAGRDKVVNLW 215
L H V ++ + +G+ ++S G+DKV+ LW
Sbjct: 440 LPGHGDEVFTVDWSPEGTKVVSGGKDKVLKLW 471
Score = 139 (54.0 bits), Expect = 5.9e-06, P = 5.9e-06
Identities = 37/169 (21%), Positives = 73/169 (43%)
Query: 485 KAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEF 544
+ A + HG+ + S +P+ + +GS D+T +W + + + T + HK + + +
Sbjct: 96 RCSASIPGHGEPVISAQFSPDGRGLASGSGDQTMRIWDIELELPLHTCKSHKSWVLCIAW 155
Query: 545 SPVDQVVITASGDKTIKIWSISDGSCL-KTFEGHTSSVLRASFLTRGAQ-----IVSCGA 598
SP + +A + I IW+ G + KT + H + ++ + SCG
Sbjct: 156 SPDATKIASACKNGEICIWNAKTGEQIGKTLKRHKQWITSLAWQPMHKDPTCRLLASCGK 215
Query: 599 DGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLW 647
DG + +W G + H + L G + +++ G D V +W
Sbjct: 216 DGNIFIWDTVQGTVVRCLSGHTASVTCLRWGGEGLIYS-GSQDRTVKMW 263
Score = 139 (54.0 bits), Expect = 5.9e-06, P = 5.9e-06
Identities = 49/205 (23%), Positives = 87/205 (42%)
Query: 430 SRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAV 489
+RC + GH V + FS + L SGS D T+++W + E P++
Sbjct: 95 TRCSASI-PGHGEPVISAQFSPDGRG-LASGSGDQTMRIWDIE-----LELPLH-----T 142
Query: 490 VAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSV-VTFRGHKRGIWSVEFSPVD 548
+H + +A +P+ + + + ++ C+W + T + HK+ I S+ + P+
Sbjct: 143 CKSHKSWVLCIAWSPDATKIASACKNGEICIWNAKTGEQIGKTLKRHKQWITSLAWQPMH 202
Query: 549 Q-----VVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVK 603
+ ++ + D I IW G+ ++ GHT+SV + G I S D VK
Sbjct: 203 KDPTCRLLASCGKDGNIFIWDTVQGTVVRCLSGHTASVTCLRWGGEGL-IYSGSQDRTVK 261
Query: 604 LWTVRTGECIATYDKHEDKIWALAV 628
+W G H I LA+
Sbjct: 262 MWRADDGVMCRNMTGHAHWINTLAL 286
Score = 138 (53.6 bits), Expect = 2.4e-22, Sum P(2) = 2.4e-22
Identities = 37/130 (28%), Positives = 60/130 (46%)
Query: 93 KCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILF 152
+C S GH P I P G LA+ D+ + +WD++ H K HK V I +
Sbjct: 96 RCSASIPGHGEPVISAQFSPDGRGLASGSGDQTMRIWDIELELPLHTCKSHKSWVLCIAW 155
Query: 153 HPDTDKSLLFSGSDDATVRVWDLLAKKCVA-TLDKHFSRVTSMA---ITSDGST--LISA 206
PD K + S + + +W+ + + TL +H +TS+A + D + L S
Sbjct: 156 SPDATK--IASACKNGEICIWNAKTGEQIGKTLKRHKQWITSLAWQPMHKDPTCRLLASC 213
Query: 207 GRDKVVNLWD 216
G+D + +WD
Sbjct: 214 GKDGNIFIWD 223
Score = 137 (53.3 bits), Expect = 6.3e-13, Sum P(2) = 6.3e-13
Identities = 46/188 (24%), Positives = 84/188 (44%)
Query: 22 GGPLV---VSSDGSFIACACGE-SINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFS 77
G P++ S DG +A G+ ++ I D+ T + + +A SPD + S
Sbjct: 105 GEPVISAQFSPDGRGLASGSGDQTMRIWDIELELPLHTCKSHKSWVLCIAWSPDATKIAS 164
Query: 78 SGHSREIRVWDLSTLKCL-RSWKGHDGPAIGMA---CH--PSGGLLATAGADRKVLVWDV 131
+ + EI +W+ T + + ++ K H +A H P+ LLA+ G D + +WD
Sbjct: 165 ACKNGEICIWNAKTGEQIGKTLKRHKQWITSLAWQPMHKDPTCRLLASCGKDGNIFIWDT 224
Query: 132 DGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRV 191
G GH V+ + + + L++SGS D TV++W + H +
Sbjct: 225 VQGTVVRCLSGHTASVTCLRWGGE---GLIYSGSQDRTVKMWRADDGVMCRNMTGHAHWI 281
Query: 192 TSMAITSD 199
++A+ +D
Sbjct: 282 NTLALNTD 289
Score = 124 (48.7 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 73/290 (25%), Positives = 115/290 (39%)
Query: 28 SSDGSFIACAC--GESINIVDLSNASIKSTIEGGSDTITALALSPDDK-----LLFSSGH 80
S D + IA AC GE + I T++ IT+LA P K LL S G
Sbjct: 156 SPDATKIASACKNGEICIWNAKTGEQIGKTLKRHKQWITSLAWQPMHKDPTCRLLASCGK 215
Query: 81 SREIRVWDLSTLKCLRSWKGHDGPAIGMACHPSGG--LLATAGADRKVLVWDVDGGFCTH 138
I +WD +R GH + C GG L+ + DR V +W D G
Sbjct: 216 DGNIFIWDTVQGTVVRCLSGHTA---SVTCLRWGGEGLIYSGSQDRTVKMWRADDGVMCR 272
Query: 139 YFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITS 198
GH ++++ + TD +L S + + + ++C + +A
Sbjct: 273 NMTGHAHWINTLALN--TDYALRTSCFEPSKRCIKPDTVEECQKVAQTRYEAALEIA--- 327
Query: 199 DGSTLISAGRDKVVNLWDLRDYSCKLTVPT--YEMVEAVCAIPP-----GSAFDSFLSSY 251
G L+S D + +W+ ++ + T ++V V P ++FD + +
Sbjct: 328 GGERLVSGSDDFTLFMWNPKETKQSINRMTGHMQLVNQVVFSPDTRYIASASFDKSVKLW 387
Query: 252 NQQTIKKKRRSLEIHFITVGERGIVRMWNADSACLYEQKSSDVTIS-FEM 300
+T K SL H VG V W+ADS L S+D T+ FE+
Sbjct: 388 CGRT-GKYLASLRGH---VGPVYQVA-WSADSRLLVSG-SADSTLKVFEL 431
Score = 120 (47.3 bits), Expect = 0.00070, P = 0.00070
Identities = 29/116 (25%), Positives = 54/116 (46%)
Query: 58 GGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPSGGLL 117
G + + SPD + + S+ + +++W T K L S +GH GP +A LL
Sbjct: 358 GHMQLVNQVVFSPDTRYIASASFDKSVKLWCGRTGKYLASLRGHVGPVYQVAWSADSRLL 417
Query: 118 ATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVW 173
+ AD + V+++ + GH V ++ + P+ K + SG D +++W
Sbjct: 418 VSGSADSTLKVFELKTKSLYYDLPGHGDEVFTVDWSPEGTK--VVSGGKDKVLKLW 471
Score = 115 (45.5 bits), Expect = 3.0e-15, Sum P(2) = 3.0e-15
Identities = 37/131 (28%), Positives = 61/131 (46%)
Query: 392 LAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSK 451
+ GH ++V + S I + S D SV+LW + + GH+G V VA+S
Sbjct: 356 MTGHMQLV---NQVVFSPDTRYIASASFDKSVKLWCGRTGKYLASLRGHVGPVYQVAWSA 412
Query: 452 KLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCT 511
LVSGS+D T+KV+ S + P HG ++ ++ +P + V +
Sbjct: 413 D-SRLLVSGSADSTLKVFELKTKSLYYDLP----------GHGDEVFTVDWSPEGTKVVS 461
Query: 512 GSQDRTACVWR 522
G +D+ +WR
Sbjct: 462 GGKDKVLKLWR 472
Score = 68 (29.0 bits), Expect = 2.2e-10, Sum P(2) = 2.2e-10
Identities = 16/49 (32%), Positives = 27/49 (55%)
Query: 378 VQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLW 426
++V++L + S Y L GH + V +D S +V+G KD ++LW
Sbjct: 426 LKVFELKTKSLYYDLPGHGDEVFTVDW---SPEGTKVVSGGKDKVLKLW 471
Score = 64 (27.6 bits), Expect = 1.2e-14, Sum P(2) = 1.2e-14
Identities = 12/39 (30%), Positives = 20/39 (51%)
Query: 179 KCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDL 217
+C A++ H V S + DG L S D+ + +WD+
Sbjct: 96 RCSASIPGHGEPVISAQFSPDGRGLASGSGDQTMRIWDI 134
>UNIPROTKB|F1SQT5 [details] [associations]
symbol:APAF1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043531 "ADP binding" evidence=IEA] [GO:0042981
"regulation of apoptotic process" evidence=IEA] [GO:0006952
"defense response" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] InterPro:IPR017986 InterPro:IPR000767
InterPro:IPR001315 InterPro:IPR001680 InterPro:IPR002182
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00619 Pfam:PF00931
PRINTS:PR00364 PROSITE:PS50082 PROSITE:PS50209 PROSITE:PS50294
SMART:SM00114 SMART:SM00320 GO:GO:0006952 GO:GO:0042981
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043531
GO:GO:0005622 Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986
CTD:317 KO:K02084 OMA:KVCKNSA InterPro:IPR017251 PIRSF:PIRSF037646
GeneTree:ENSGT00700000104017 EMBL:FP102239 EMBL:CU633605
RefSeq:XP_003481790.1 Ensembl:ENSSSCT00000000968
Ensembl:ENSSSCT00000033603 GeneID:100513283 KEGG:ssc:100513283
Uniprot:F1SQT5
Length = 1249
Score = 313 (115.2 bits), Expect = 3.3e-24, P = 3.3e-24
Identities = 153/625 (24%), Positives = 276/625 (44%)
Query: 28 SSDGSFIA-CACGESINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRV 86
S DG IA C +++ + I+ D + A S DD+ + + +++++
Sbjct: 624 SEDGQRIASCGADKTLQVFKAETGEKLLEIKAHEDEVLCCAFSADDRFIATCSVDKKVKI 683
Query: 87 WDLSTLKCLRSWKGHDGPAIGMACHPSGG----LLATAGADRKVLVWDVDGGFCTHYFKG 142
W+ T + ++S+ H CH + LLAT +D + +WD++ C + G
Sbjct: 684 WNSVTGELVQSYDEHSEQV--NCCHFTNNSNHLLLATGSSDYFLKLWDLNQKECRNTMFG 741
Query: 143 HKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLA---KKCVAT----LDKHFSR----- 190
H VS F PD DK LL S S D T+++WD+ + +K + L+ S+
Sbjct: 742 HTNSVSHCRFSPD-DK-LLASCSADGTLKLWDVKSANERKSINVKQFFLNSEESQEDMEV 799
Query: 191 -VTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPT-YEMVEAVCAIPPGSAFDSF- 247
V + ++DG++L+ A ++KV+ L+++ + T + C P +
Sbjct: 800 MVKCCSWSADGASLVVAAKNKVL-LFNIHTGGLLAEIHTGHHSTIQYCDFSPSNHLAVVA 858
Query: 248 LSSYNQQTIKKKRRSLEIHFITVGERGIVR--MWNADSACLYEQKSSDVTISFEMDDSKR 305
LS Y + + L++ G V M++ D + + S D TI + K
Sbjct: 859 LSQYCVE-LWNMDSCLKVADCR-GHLSWVHCAMFSPDGSS-FLTSSDDETIRL-WETKKV 914
Query: 306 GFTAATVLPSNQGLLCVTADQQLLLYTTVEVPEKKMELILSKR-LVGY-NEEILDLKFLG 363
+A VL N+ + V + ++++ + +++++I K + Y E + L
Sbjct: 915 CKNSAIVL--NKKIDVVFQENEVMVLAVDNI--RRLQVINGKTGQIDYLTEAQVSCCCLS 970
Query: 364 EEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSV 423
QYLA ++ +QV +L + H V + + GK +++ S D+++
Sbjct: 971 PHLQYLAFGSDDGAIQVLELLNNRLFQSRTRHKNTVRHIQFT--TDGKN-VISSSDDSAI 1027
Query: 424 RLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMN 483
++W+ +S V + H V K + L+S S D T+KVW+ ++ E+
Sbjct: 1028 QVWNWQSEETVSL-QAHQETVKDFRLLKNSR--LLSWSFDGTVKVWNI--ITGRIEKDF- 1081
Query: 484 LKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVV-TFRGHKRGIWSV 542
H + S ++P+ + + S D+TA +W DL+S + RGHK +
Sbjct: 1082 -------VCHQDTVLSCDISPDATKFSSTSADKTAKIWSF-DLLSPLHELRGHKGCVRCS 1133
Query: 543 EFSPVDQVVITASGDKT--IKIWSISDG----SCLKTF-EG----HTSSVLRASFLTRGA 591
FS VD ++ A+GD I+IW++S+G SC EG H V F G
Sbjct: 1134 AFS-VDSTLL-ATGDDNGEIRIWNVSNGELLHSCAPVLVEGGAATHGGWVTDLRFSPDGK 1191
Query: 592 QIVSCGADGLVKLWTVRTGECIATY 616
+VS G G +K W V +G+ I T+
Sbjct: 1192 MLVSAG--GYLKWWNVDSGKSIQTF 1214
Score = 180 (68.4 bits), Expect = 5.2e-16, Sum P(2) = 5.2e-16
Identities = 46/179 (25%), Positives = 82/179 (45%)
Query: 40 ESINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWK 99
E IN ++ N S + + +D + S D + + S G + ++V+ T + L K
Sbjct: 596 EWINKKNIKNLS-RLVVRPHTDAVYHACFSEDGQRIASCGADKTLQVFKAETGEKLLEIK 654
Query: 100 GHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKS 159
H+ + A +AT D+KV +W+ G + H V+ F +++
Sbjct: 655 AHEDEVLCCAFSADDRFIATCSVDKKVKIWNSVTGELVQSYDEHSEQVNCCHFTNNSNHL 714
Query: 160 LLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLR 218
LL +GS D +++WDL K+C T+ H + V+ + D L S D + LWD++
Sbjct: 715 LLATGSSDYFLKLWDLNQKECRNTMFGHTNSVSHCRFSPDDKLLASCSADGTLKLWDVK 773
Score = 160 (61.4 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 45/172 (26%), Positives = 79/172 (45%)
Query: 440 HMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINS 499
H AV FS+ Q + S +D T++V+ ++ E+ + +KA H ++
Sbjct: 614 HTDAVYHACFSEDGQR-IASCGADKTLQVFK----AETGEKLLEIKA------HEDEVLC 662
Query: 500 LAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASG--D 557
A + +D + T S D+ +W V ++ H + F+ ++ A+G D
Sbjct: 663 CAFSADDRFIATCSVDKKVKIWNSVTGELVQSYDEHSEQVNCCHFTNNSNHLLLATGSSD 722
Query: 558 KTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRT 609
+K+W ++ C T GHT+SV F + SC ADG +KLW V++
Sbjct: 723 YFLKLWDLNQKECRNTMFGHTNSVSHCRFSPDDKLLASCSADGTLKLWDVKS 774
Score = 156 (60.0 bits), Expect = 3.2e-07, P = 3.2e-07
Identities = 34/123 (27%), Positives = 57/123 (46%)
Query: 527 VSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASF 586
+S + R H ++ FS Q + + DKT++++ G L + H VL +F
Sbjct: 606 LSRLVVRPHTDAVYHACFSEDGQRIASCGADKTLQVFKAETGEKLLEIKAHEDEVLCCAF 665
Query: 587 LTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTE--MFATGGSDALV 644
I +C D VK+W TGE + +YD+H +++ + + ATG SD +
Sbjct: 666 SADDRFIATCSVDKKVKIWNSVTGELVQSYDEHSEQVNCCHFTNNSNHLLLATGSSDYFL 725
Query: 645 NLW 647
LW
Sbjct: 726 KLW 728
Score = 111 (44.1 bits), Expect = 5.2e-16, Sum P(2) = 5.2e-16
Identities = 54/257 (21%), Positives = 95/257 (36%)
Query: 400 LCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVG-TGHM-----GAVGAVAFSKKL 453
+C ++ + + KI +V + V D+ R V G TG + V S L
Sbjct: 914 VCKNSAIVLNKKIDVVFQENEVMVLAVDNIRRLQVINGKTGQIDYLTEAQVSCCCLSPHL 973
Query: 454 QNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGS 513
Q +L GS D I+V +N + H + + + V + S
Sbjct: 974 Q-YLAFGSDDGAIQVLEL----------LNNRLFQSRTRHKNTVRHIQFTTDGKNVISSS 1022
Query: 514 QDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKT 573
D VW V+ + H+ + ++ ++ S D T+K+W+I G K
Sbjct: 1023 DDSAIQVWNWQS-EETVSLQAHQETVKDFRLLKNSRL-LSWSFDGTVKVWNIITGRIEKD 1080
Query: 574 FEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTE 633
F H +VL + S AD K+W+ + H+ + A +
Sbjct: 1081 FVCHQDTVLSCDISPDATKFSSTSADKTAKIWSFDLLSPLHELRGHKGCVRCSAFSVDST 1140
Query: 634 MFATGGSDALVNLWHDS 650
+ ATG + + +W+ S
Sbjct: 1141 LLATGDDNGEIRIWNVS 1157
Score = 108 (43.1 bits), Expect = 1.1e-15, Sum P(2) = 1.1e-15
Identities = 47/176 (26%), Positives = 79/176 (44%)
Query: 469 WSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVS 528
WSFDG + + + + H + S ++P+ + + S D+TA +W DL+S
Sbjct: 1061 WSFDG-TVKVWNIITGRIEKDFVCHQDTVLSCDISPDATKFSSTSADKTAKIWSF-DLLS 1118
Query: 529 VV-TFRGHKRGIWSVEFSPVDQVVITASGDKT--IKIWSISDGSCLKTFEGHTSSVLRAS 585
+ RGHK + FS VD ++ A+GD I+IW++S+G L H+ A
Sbjct: 1119 PLHELRGHKGCVRCSAFS-VDSTLL-ATGDDNGEIRIWNVSNGELL-----HSC----AP 1167
Query: 586 FLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSD 641
L G G + L G+ + + + K W + GK + F T G++
Sbjct: 1168 VLVEGGAATHGG--WVTDLRFSPDGKMLVSAGGYL-KWWNVDSGKSIQTFYTNGTN 1220
>DICTYBASE|DDB_G0287273 [details] [associations]
symbol:wdr5 "WD40 repeat-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0051568 "histone H3-K4
methylation" evidence=ISS] [GO:0042393 "histone binding"
evidence=ISS] [GO:0035097 "histone methyltransferase complex"
evidence=ISS] [GO:0005634 "nucleus" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0287273
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CM000154_GR GO:GO:0042393 GO:GO:0051568 GO:GO:0035097
EMBL:AAFI02000099 HSSP:P61964 KO:K14963 OMA:KLWKSDT
RefSeq:XP_637302.1 ProteinModelPortal:Q54KL5 SMR:Q54KL5
EnsemblProtists:DDB0232948 GeneID:8626039 KEGG:ddi:DDB_G0287273
ProtClustDB:CLSZ2430012 Uniprot:Q54KL5
Length = 335
Score = 285 (105.4 bits), Expect = 4.2e-24, P = 4.2e-24
Identities = 86/330 (26%), Positives = 156/330 (47%)
Query: 326 QQLLLYTTVEVPEKKMELILSKRLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSS 385
QQ T +P+ IL L G+ + I +KF + ++LA A+ + ++++
Sbjct: 20 QQQQPQQTESIPQTP-NYILKYTLKGHLKSISSVKF-SPDGKWLASASADKTIKIWGAYD 77
Query: 386 MSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVG 445
L GH E + A S LI + S D ++++WD ES V GH V
Sbjct: 78 GKFERTLEGHKEGI---SDIAWSQDSKLICSASDDKTIKIWDVESGKMVKTLKGHKEYVF 134
Query: 446 AVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPN 505
V+F+ + N +VSGS D +++W + + +++AH + + +
Sbjct: 135 GVSFNPQ-SNLIVSGSFDENVRIWDVN----------TGECTKMISAHSDPVTGVHFNRD 183
Query: 506 DSLVCTGSQDRTACVWRLP--DLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIW 563
+LV +GS D T +W L++ ++ K + V+FSP + V+ + D T+++W
Sbjct: 184 GTLVVSGSYDGTVRIWDTTTGQLLNTISTEDGKE-VSFVKFSPNGKFVLAGTLDNTLRLW 242
Query: 564 SISDGS-CLKTFEGHTSS--VLRASF-LTRGAQIVSCGADGLVKLWTVRTGECIATYDKH 619
S ++ CLKT+ GH + + ++F +T G IV+ D L+ ++ ++T E + T H
Sbjct: 243 SYNNNKKCLKTYTGHKNEKYCIFSTFSVTCGKWIVTGSEDNLIYIYNLQTREIVQTLAGH 302
Query: 620 EDKIWALAVGKKTEMFATGG--SDALVNLW 647
ED + +A + A+G D V +W
Sbjct: 303 EDVVLTVACHPTENIIASGALEKDRSVKIW 332
Score = 264 (98.0 bits), Expect = 7.8e-22, P = 7.8e-22
Identities = 61/211 (28%), Positives = 101/211 (47%)
Query: 28 SSDGSFIACACGE-SINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRV 86
S DG ++A A + +I I + + T+EG + I+ +A S D KL+ S+ + I++
Sbjct: 55 SPDGKWLASASADKTIKIWGAYDGKFERTLEGHKEGISDIAWSQDSKLICSASDDKTIKI 114
Query: 87 WDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGV 146
WD+ + K +++ KGH G++ +P L+ + D V +WDV+ G CT H
Sbjct: 115 WDVESGKMVKTLKGHKEYVFGVSFNPQSNLIVSGSFDENVRIWDVNTGECTKMISAHSDP 174
Query: 147 VSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISA 206
V+ + H + D +L+ SGS D TVR+WD + + T+ + S S + A
Sbjct: 175 VTGV--HFNRDGTLVVSGSYDGTVRIWDTTTGQLLNTISTEDGKEVSFVKFSPNGKFVLA 232
Query: 207 GR-DKVVNLWDLRDYSCKLTVPTYEMVEAVC 236
G D + LW + L T E C
Sbjct: 233 GTLDNTLRLWSYNNNKKCLKTYTGHKNEKYC 263
Score = 259 (96.2 bits), Expect = 2.7e-21, P = 2.7e-21
Identities = 55/177 (31%), Positives = 85/177 (48%)
Query: 475 SDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRG 534
++ Q N K + H K I+S+ +P+ + + S D+T +W D T G
Sbjct: 27 TESIPQTPNYILKYTLKGHLKSISSVKFSPDGKWLASASADKTIKIWGAYDGKFERTLEG 86
Query: 535 HKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIV 594
HK GI + +S +++ +AS DKTIKIW + G +KT +GH V SF + IV
Sbjct: 87 HKEGISDIAWSQDSKLICSASDDKTIKIWDVESGKMVKTLKGHKEYVFGVSFNPQSNLIV 146
Query: 595 SCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLWHDST 651
S D V++W V TGEC H D + + + + +G D V +W +T
Sbjct: 147 SGSFDENVRIWDVNTGECTKMISAHSDPVTGVHFNRDGTLVVSGSYDGTVRIWDTTT 203
Score = 252 (93.8 bits), Expect = 1.5e-20, P = 1.5e-20
Identities = 58/199 (29%), Positives = 98/199 (49%)
Query: 23 GPLVVSSDGSFI-----ACACGESINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFS 77
GP +SS S++ ++ +I N +K T++G +I+++ SPD K L S
Sbjct: 4 GPASMSSSSSYLYQEQQQQQPQQTESIPQTPNYILKYTLKGHLKSISSVKFSPDGKWLAS 63
Query: 78 SGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCT 137
+ + I++W K R+ +GH +A L+ +A D+ + +WDV+ G
Sbjct: 64 ASADKTIKIWGAYDGKFERTLEGHKEGISDIAWSQDSKLICSASDDKTIKIWDVESGKMV 123
Query: 138 HYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAIT 197
KGHK V + F+P ++ L+ SGS D VR+WD+ +C + H VT +
Sbjct: 124 KTLKGHKEYVFGVSFNPQSN--LIVSGSFDENVRIWDVNTGECTKMISAHSDPVTGVHFN 181
Query: 198 SDGSTLISAGRDKVVNLWD 216
DG+ ++S D V +WD
Sbjct: 182 RDGTLVVSGSYDGTVRIWD 200
Score = 228 (85.3 bits), Expect = 1.5e-16, P = 1.5e-16
Identities = 76/317 (23%), Positives = 145/317 (45%)
Query: 296 ISFEMDDSKRGFTAATVLPSNQGLLCVTADQQLLLYTTVEVPEKKMELILSKRLVGYNEE 355
+ + + + ++ P + L +AD+ + ++ + K E + L G+ E
Sbjct: 38 LKYTLKGHLKSISSVKFSPDGKWLASASADKTIKIWGAYD---GKFE----RTLEGHKEG 90
Query: 356 ILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIV 415
I D+ + ++ + + A++ + ++++D+ S L GH E V + S+ LIV
Sbjct: 91 ISDIAW-SQDSKLICSASDDKTIKIWDVESGKMVKTLKGHKEYVFGVSFNPQSN---LIV 146
Query: 416 TGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLS 475
+GS D +VR+WD + C + + H V V F++ +VSGS D T+++W
Sbjct: 147 SGSFDENVRIWDVNTGECTKMISAHSDPVTGVHFNRD-GTLVVSGSYDGTVRIWD----- 200
Query: 476 DDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVV-TFRG 534
Q +N + GK+++ + +PN V G+ D T +W + + T+ G
Sbjct: 201 TTTGQLLN----TISTEDGKEVSFVKFSPNGKFVLAGTLDNTLRLWSYNNNKKCLKTYTG 256
Query: 535 HKRGIWSV--EFSPV-DQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGA 591
HK + + FS + ++T S D I I+++ ++T GH VL +
Sbjct: 257 HKNEKYCIFSTFSVTCGKWIVTGSEDNLIYIYNLQTREIVQTLAGHEDVVLTVACHPT-E 315
Query: 592 QIVSCGA---DGLVKLW 605
I++ GA D VK+W
Sbjct: 316 NIIASGALEKDRSVKIW 332
Score = 205 (77.2 bits), Expect = 9.9e-14, P = 9.9e-14
Identities = 40/136 (29%), Positives = 72/136 (52%)
Query: 516 RTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFE 575
+T + + P+ + T +GH + I SV+FSP + + +AS DKTIKIW DG +T E
Sbjct: 26 QTESIPQTPNYILKYTLKGHLKSISSVKFSPDGKWLASASADKTIKIWGAYDGKFERTLE 85
Query: 576 GHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMF 635
GH + ++ I S D +K+W V +G+ + T H++ ++ ++ ++ +
Sbjct: 86 GHKEGISDIAWSQDSKLICSASDDKTIKIWDVESGKMVKTLKGHKEYVFGVSFNPQSNLI 145
Query: 636 ATGGSDALVNLWHDST 651
+G D V +W +T
Sbjct: 146 VSGSFDENVRIWDVNT 161
Score = 155 (59.6 bits), Expect = 5.0e-08, P = 5.0e-08
Identities = 49/197 (24%), Positives = 86/197 (43%)
Query: 25 LVVSSDGSFIACACGESINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREI 84
L+VS GSF E++ I D++ I SD +T + + D L+ S + +
Sbjct: 144 LIVS--GSF-----DENVRIWDVNTGECTKMISAHSDPVTGVHFNRDGTLVVSGSYDGTV 196
Query: 85 RVWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGA-DRKVLVWDVDGGF-CTHYFKG 142
R+WD +T + L + DG + G AG D + +W + C + G
Sbjct: 197 RIWDTTTGQLLNTISTEDGKEVSFVKFSPNGKFVLAGTLDNTLRLWSYNNNKKCLKTYTG 256
Query: 143 HKGVVSSIL--FHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDG 200
HK I F K ++ +GS+D + +++L ++ V TL H V ++A
Sbjct: 257 HKNEKYCIFSTFSVTCGKWIV-TGSEDNLIYIYNLQTREIVQTLAGHEDVVLTVACHPTE 315
Query: 201 STLISAG--RDKVVNLW 215
+ + S +D+ V +W
Sbjct: 316 NIIASGALEKDRSVKIW 332
>UNIPROTKB|F1N9W1 [details] [associations]
symbol:FBXW7 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0001570 "vasculogenesis" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0006974 "response
to DNA damage stimulus" evidence=IEA] [GO:0007062 "sister chromatid
cohesion" evidence=IEA] [GO:0007219 "Notch signaling pathway"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IEA]
[GO:0030324 "lung development" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0032876 "negative regulation of DNA
endoreduplication" evidence=IEA] [GO:0034644 "cellular response to
UV" evidence=IEA] [GO:0045741 "positive regulation of epidermal
growth factor-activated receptor activity" evidence=IEA]
[GO:0050821 "protein stabilization" evidence=IEA] [GO:0070374
"positive regulation of ERK1 and ERK2 cascade" evidence=IEA]
[GO:2000060 "positive regulation of protein ubiquitination involved
in ubiquitin-dependent protein catabolic process" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 GO:GO:0005783
GO:GO:0005794 GO:GO:0050821 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219 GO:GO:0045741
GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0006974 GO:GO:0016567
GO:GO:0019005 GO:GO:0034644 GO:GO:0032876 GO:GO:2000060
GO:GO:0031146 GO:GO:0007062 GeneTree:ENSGT00690000101849
OMA:EECLHTL EMBL:AADN02016174 IPI:IPI00582326
Ensembl:ENSGALT00000016428 Uniprot:F1N9W1
Length = 587
Score = 255 (94.8 bits), Expect = 1.8e-18, P = 1.8e-18
Identities = 67/231 (29%), Positives = 112/231 (48%)
Query: 391 VLAGHSE-IVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAF 449
VL GH + ++ CL C G IV+GS DN++++W + + C+ GH G V +
Sbjct: 255 VLKGHDDHVITCLQFC----GN-RIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWS--- 306
Query: 450 SKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLV 509
S+ N ++SGS+D T+KVW+ AE + + +G + ++ V
Sbjct: 307 SQMRDNIIISGSTDRTLKVWN-------AET-----GECIHTLYGHTSTVRCMHLHEKRV 354
Query: 510 CTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGS 569
+GS+D T VW + + GH + V++ + V++ + D +K+W +
Sbjct: 355 VSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYD--GRRVVSGAYDFMVKVWDPETET 412
Query: 570 CLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHE 620
CL T +GHT+ V F G +VS D +++W V TG CI T H+
Sbjct: 413 CLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQ 461
Score = 215 (80.7 bits), Expect = 4.3e-14, P = 4.3e-14
Identities = 56/198 (28%), Positives = 89/198 (44%)
Query: 30 DGSFIACACGESINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWDL 89
D I+ + ++ + + T+ G + T+ + L +K + S +RVWD+
Sbjct: 311 DNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLH--EKRVVSGSRDATLRVWDI 368
Query: 90 STLKCLRSWKGHDGPAIGMACHPSGGLLATAGA-DRKVLVWDVDGGFCTHYFKGHKGVVS 148
T +CL GH + C G +GA D V VWD + C H +GH V
Sbjct: 369 ETGQCLHVLMGH---VAAVRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVY 425
Query: 149 SILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGR 208
S+ F D + SGS D ++RVWD+ C+ TL H S + M + + L+S
Sbjct: 426 SLQF----DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDN--ILVSGNA 479
Query: 209 DKVVNLWDLRDYSCKLTV 226
D V +WD++ C T+
Sbjct: 480 DSTVKIWDIKTGQCLQTL 497
Score = 203 (76.5 bits), Expect = 4.6e-24, Sum P(2) = 4.6e-24
Identities = 56/194 (28%), Positives = 90/194 (46%)
Query: 457 LVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDR 516
+VSGS D T++VW D E L V+ H + V + V +G+ D
Sbjct: 354 VVSGSRDATLRVW-------DIETGQCLH---VLMGHVAAVR--CVQYDGRRVVSGAYDF 401
Query: 517 TACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEG 576
VW + T +GH ++S++F + V++ S D +I++W + G+C+ T G
Sbjct: 402 MVKVWDPETETCLHTLQGHTNRVYSLQFDGIH--VVSGSLDTSIRVWDVETGNCIHTLTG 459
Query: 577 HTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATY---DKHEDKIWALAVGKKTE 633
H S L + + +VS AD VK+W ++TG+C+ T +KH+ + L K
Sbjct: 460 HQS--LTSGMELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKN-- 515
Query: 634 MFATGGSDALVNLW 647
T D V LW
Sbjct: 516 FVITSSDDGTVKLW 529
Score = 202 (76.2 bits), Expect = 1.1e-12, P = 1.1e-12
Identities = 46/152 (30%), Positives = 79/152 (51%)
Query: 71 DDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGA-DRKVLVW 129
D + + S + ++VWD T CL + +GH + G+ +G+ D + VW
Sbjct: 390 DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFD---GIHVVSGSLDTSIRVW 446
Query: 130 DVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATL---DK 186
DV+ G C H GH+ + S + + ++L SG+ D+TV++WD+ +C+ TL +K
Sbjct: 447 DVETGNCIHTLTGHQSLTSGM----ELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPNK 502
Query: 187 HFSRVTSMAITSDGSTLISAGRDKVVNLWDLR 218
H S VT + + +I++ D V LWDL+
Sbjct: 503 HQSAVTCLQFNKN--FVITSSDDGTVKLWDLK 532
Score = 201 (75.8 bits), Expect = 1.5e-12, P = 1.5e-12
Identities = 48/169 (28%), Positives = 82/169 (48%)
Query: 484 LKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVE 543
LK+ V+ H + + + +V +GS D T VW + T GH G+WS +
Sbjct: 250 LKSPKVLKGHDDHVITCLQFCGNRIV-SGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQ 308
Query: 544 FSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVK 603
D ++I+ S D+T+K+W+ G C+ T GHTS+V R L ++VS D ++
Sbjct: 309 MR--DNIIISGSTDRTLKVWNAETGECIHTLYGHTSTV-RCMHLHE-KRVVSGSRDATLR 364
Query: 604 LWTVRTGECIATYDKHEDKIWALAV-GKKTEMFATGGSDALVNLWHDST 651
+W + TG+C+ H + + G++ +G D +V +W T
Sbjct: 365 VWDIETGQCLHVLMGHVAAVRCVQYDGRRV---VSGAYDFMVKVWDPET 410
Score = 198 (74.8 bits), Expect = 3.1e-12, P = 3.1e-12
Identities = 51/172 (29%), Positives = 81/172 (47%)
Query: 56 IEGGSD-TITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPSG 114
++G D IT L + + S ++VW T KCLR+ GH G +
Sbjct: 256 LKGHDDHVITCLQFCGNR--IVSGSDDNTLKVWSAVTGKCLRTLVGHTGGV--WSSQMRD 311
Query: 115 GLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWD 174
++ + DR + VW+ + G C H GH V + H +K ++ SGS DAT+RVWD
Sbjct: 312 NIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLH---EKRVV-SGSRDATLRVWD 367
Query: 175 LLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTV 226
+ +C+ L H + V + DG ++S D +V +WD +C T+
Sbjct: 368 IETGQCLHVLMGHVAAVR--CVQYDGRRVVSGAYDFMVKVWDPETETCLHTL 417
Score = 176 (67.0 bits), Expect = 4.5e-21, Sum P(2) = 4.5e-21
Identities = 40/147 (27%), Positives = 70/147 (47%)
Query: 505 NDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWS 564
++ V +GS+D T VW + + GH + V++ + V++ + D +K+W
Sbjct: 350 HEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYD--GRRVVSGAYDFMVKVWD 407
Query: 565 ISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIW 624
+CL T +GHT+ V F G +VS D +++W V TG CI T H+
Sbjct: 408 PETETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTS 465
Query: 625 ALAVGKKTEMFATGGSDALVNLWHDST 651
+ + K + +G +D+ V +W T
Sbjct: 466 GMEL--KDNILVSGNADSTVKIWDIKT 490
Score = 172 (65.6 bits), Expect = 2.1e-09, P = 2.1e-09
Identities = 43/139 (30%), Positives = 65/139 (46%)
Query: 514 QDRTACVWRLPDLVSVVTFRGHK-RGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLK 572
Q R WR +L S +GH I ++F +++ S D T+K+WS G CL+
Sbjct: 238 QHRIDTNWRRGELKSPKVLKGHDDHVITCLQFC--GNRIVSGSDDNTLKVWSAVTGKCLR 295
Query: 573 TFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKT 632
T GHT V + R I+S D +K+W TGECI T H + + + +K
Sbjct: 296 TLVGHTGGVWSSQM--RDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKR 353
Query: 633 EMFATGGSDALVNLWHDST 651
+ +G DA + +W T
Sbjct: 354 VV--SGSRDATLRVWDIET 370
Score = 170 (64.9 bits), Expect = 2.0e-20, Sum P(2) = 2.0e-20
Identities = 55/177 (31%), Positives = 82/177 (46%)
Query: 441 MGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSL 500
MG V AV + +VSG+ D +KVW D E L + H + SL
Sbjct: 378 MGHVAAVRCVQYDGRRVVSGAYDFMVKVW-------DPETETCLHT---LQGHTNRVYSL 427
Query: 501 AVAPNDSL-VCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKT 559
D + V +GS D + VW + + T GH+ +E D ++++ + D T
Sbjct: 428 QF---DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELK--DNILVSGNADST 482
Query: 560 IKIWSISDGSCLKTFEG---HTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECI 613
+KIW I G CL+T +G H S+V F +++ DG VKLW ++TGE I
Sbjct: 483 VKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNF--VITSSDDGTVKLWDLKTGEFI 537
Score = 160 (61.4 bits), Expect = 4.3e-08, P = 4.3e-08
Identities = 42/162 (25%), Positives = 74/162 (45%)
Query: 27 VSSDGSFIACACGE-SINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIR 85
V DG + + + + D + T++G ++ + +L D + S IR
Sbjct: 387 VQYDGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIR 444
Query: 86 VWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKG--- 142
VWD+ T C+ + GH GM + +L + AD V +WD+ G C +G
Sbjct: 445 VWDVETGNCIHTLTGHQSLTSGMELKDN--ILVSGNADSTVKIWDIKTGQCLQTLQGPNK 502
Query: 143 HKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATL 184
H+ V+ + F+ K+ + + SDD TV++WDL + + L
Sbjct: 503 HQSAVTCLQFN----KNFVITSSDDGTVKLWDLKTGEFIRNL 540
Score = 155 (59.6 bits), Expect = 4.6e-24, Sum P(2) = 4.6e-24
Identities = 45/151 (29%), Positives = 66/151 (43%)
Query: 76 FSSGHSREIRV---WDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVL-VWDV 131
+ S + R+ R+ W LK + KGHD I C G +G+D L VW
Sbjct: 231 WKSAYIRQHRIDTNWRRGELKSPKVLKGHDDHVI--TCLQFCGNRIVSGSDDNTLKVWSA 288
Query: 132 DGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRV 191
G C GH G V S + ++ SGS D T++VW+ +C+ TL H S V
Sbjct: 289 VTGKCLRTLVGHTGGVWSSQMRDN----IIISGSTDRTLKVWNAETGECIHTLYGHTSTV 344
Query: 192 TSMAITSDGSTLISAGRDKVVNLWDLRDYSC 222
M + ++S RD + +WD+ C
Sbjct: 345 RCMHLHE--KRVVSGSRDATLRVWDIETGQC 373
Score = 144 (55.7 bits), Expect = 1.3e-17, Sum P(2) = 1.3e-17
Identities = 44/171 (25%), Positives = 82/171 (47%)
Query: 405 CALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDH 464
C G+ +V+G+ D V++WD E+ C+ GH V ++ F +VSGS D
Sbjct: 386 CVQYDGR-RVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFDGI---HVVSGSLDT 441
Query: 465 TIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLP 524
+I+VW D E + + H + + S + D+++ +G+ D T +W +
Sbjct: 442 SIRVW-------DVETGNCIHT---LTGH-QSLTS-GMELKDNILVSGNADSTVKIWDIK 489
Query: 525 DLVSVVTFRG---HKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLK 572
+ T +G H+ + ++F+ VIT+S D T+K+W + G ++
Sbjct: 490 TGQCLQTLQGPNKHQSAVTCLQFNK--NFVITSSDDGTVKLWDLKTGEFIR 538
Score = 140 (54.3 bits), Expect = 6.4e-06, P = 6.4e-06
Identities = 71/313 (22%), Positives = 135/313 (43%)
Query: 167 DATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTV 226
D R +L + K + D H +T + G+ ++S D + +W C T
Sbjct: 242 DTNWRRGELKSPKVLKGHDDHV--ITCLQFC--GNRIVSGSDDNTLKVWSAVTGKCLRT- 296
Query: 227 PTYEMVEAVCAIPPGSAFDSFL-SSYNQQTIKK-KRRSLE-IHFITVGERGIVRMWNADS 283
+V + D+ + S +T+K + E IH + G VR +
Sbjct: 297 ----LVGHTGGVWSSQMRDNIIISGSTDRTLKVWNAETGECIHTL-YGHTSTVRCMHLHE 351
Query: 284 ACLYEQKSSDVTISFEMDDSKRGFTAATVLPSNQGLLCVTADQQLLL---YT-TVEVPEK 339
+ S D T+ + D + G ++ + CV D + ++ Y V+V +
Sbjct: 352 KRVVSG-SRDATL--RVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDP 408
Query: 340 KMELILSKRLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIV 399
+ E L L G+ + L+F G ++ T+I +V+D+ + +C + L GH +
Sbjct: 409 ETETCLHT-LQGHTNRVYSLQFDGIHVVSGSLDTSI---RVWDVETGNCIHTLTGHQSL- 463
Query: 400 LCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTG---HMGAVGAVAFSKKLQNF 456
T + ++V+G+ D++V++WD ++ C+ G H AV + F+K NF
Sbjct: 464 ----TSGMELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNK---NF 516
Query: 457 LVSGSSDHTIKVW 469
+++ S D T+K+W
Sbjct: 517 VITSSDDGTVKLW 529
>UNIPROTKB|F1MNN4 [details] [associations]
symbol:FBXW7 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:2000060 "positive regulation of protein ubiquitination
involved in ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0070374 "positive regulation of ERK1 and ERK2
cascade" evidence=IEA] [GO:0050821 "protein stabilization"
evidence=IEA] [GO:0045741 "positive regulation of epidermal growth
factor-activated receptor activity" evidence=IEA] [GO:0034644
"cellular response to UV" evidence=IEA] [GO:0032876 "negative
regulation of DNA endoreduplication" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0030324 "lung development" evidence=IEA]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0007219
"Notch signaling pathway" evidence=IEA] [GO:0007062 "sister
chromatid cohesion" evidence=IEA] [GO:0006974 "response to DNA
damage stimulus" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0001570 "vasculogenesis" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 GO:GO:0005783
GO:GO:0005794 GO:GO:0050821 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219 GO:GO:0045741
GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0006974 GO:GO:0016567
GO:GO:0019005 GO:GO:0034644 GO:GO:0032876 GO:GO:2000060
GO:GO:0031146 GO:GO:0007062 GeneTree:ENSGT00690000101849
OMA:EECLHTL EMBL:DAAA02044177 IPI:IPI00716528 UniGene:Bt.24006
ProteinModelPortal:F1MNN4 Ensembl:ENSBTAT00000010457 Uniprot:F1MNN4
Length = 627
Score = 255 (94.8 bits), Expect = 2.0e-18, P = 2.0e-18
Identities = 67/231 (29%), Positives = 112/231 (48%)
Query: 391 VLAGHSE-IVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAF 449
VL GH + ++ CL C G IV+GS DN++++W + + C+ GH G V +
Sbjct: 295 VLKGHDDHVITCLQFC----GN-RIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWS--- 346
Query: 450 SKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLV 509
S+ N ++SGS+D T+KVW+ AE + + +G + ++ V
Sbjct: 347 SQMRDNIIISGSTDRTLKVWN-------AET-----GECIHTLYGHTSTVRCMHLHEKRV 394
Query: 510 CTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGS 569
+GS+D T VW + + GH + V++ + V++ + D +K+W +
Sbjct: 395 VSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYD--GRRVVSGAYDFMVKVWDPETET 452
Query: 570 CLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHE 620
CL T +GHT+ V F G +VS D +++W V TG CI T H+
Sbjct: 453 CLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQ 501
Score = 215 (80.7 bits), Expect = 4.9e-14, P = 4.9e-14
Identities = 56/198 (28%), Positives = 89/198 (44%)
Query: 30 DGSFIACACGESINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWDL 89
D I+ + ++ + + T+ G + T+ + L +K + S +RVWD+
Sbjct: 351 DNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLH--EKRVVSGSRDATLRVWDI 408
Query: 90 STLKCLRSWKGHDGPAIGMACHPSGGLLATAGA-DRKVLVWDVDGGFCTHYFKGHKGVVS 148
T +CL GH + C G +GA D V VWD + C H +GH V
Sbjct: 409 ETGQCLHVLMGH---VAAVRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVY 465
Query: 149 SILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGR 208
S+ F D + SGS D ++RVWD+ C+ TL H S + M + + L+S
Sbjct: 466 SLQF----DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDN--ILVSGNA 519
Query: 209 DKVVNLWDLRDYSCKLTV 226
D V +WD++ C T+
Sbjct: 520 DSTVKIWDIKTGQCLQTL 537
Score = 203 (76.5 bits), Expect = 5.8e-24, Sum P(2) = 5.8e-24
Identities = 56/194 (28%), Positives = 90/194 (46%)
Query: 457 LVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDR 516
+VSGS D T++VW D E L V+ H + V + V +G+ D
Sbjct: 394 VVSGSRDATLRVW-------DIETGQCLH---VLMGHVAAVR--CVQYDGRRVVSGAYDF 441
Query: 517 TACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEG 576
VW + T +GH ++S++F + V++ S D +I++W + G+C+ T G
Sbjct: 442 MVKVWDPETETCLHTLQGHTNRVYSLQFDGIH--VVSGSLDTSIRVWDVETGNCIHTLTG 499
Query: 577 HTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATY---DKHEDKIWALAVGKKTE 633
H S L + + +VS AD VK+W ++TG+C+ T +KH+ + L K
Sbjct: 500 HQS--LTSGMELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKN-- 555
Query: 634 MFATGGSDALVNLW 647
T D V LW
Sbjct: 556 FVITSSDDGTVKLW 569
Score = 202 (76.2 bits), Expect = 1.3e-12, P = 1.3e-12
Identities = 46/152 (30%), Positives = 79/152 (51%)
Query: 71 DDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGA-DRKVLVW 129
D + + S + ++VWD T CL + +GH + G+ +G+ D + VW
Sbjct: 430 DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFD---GIHVVSGSLDTSIRVW 486
Query: 130 DVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATL---DK 186
DV+ G C H GH+ + S + + ++L SG+ D+TV++WD+ +C+ TL +K
Sbjct: 487 DVETGNCIHTLTGHQSLTSGM----ELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPNK 542
Query: 187 HFSRVTSMAITSDGSTLISAGRDKVVNLWDLR 218
H S VT + + +I++ D V LWDL+
Sbjct: 543 HQSAVTCLQFNKN--FVITSSDDGTVKLWDLK 572
Score = 201 (75.8 bits), Expect = 1.6e-12, P = 1.6e-12
Identities = 48/169 (28%), Positives = 82/169 (48%)
Query: 484 LKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVE 543
LK+ V+ H + + + +V +GS D T VW + T GH G+WS +
Sbjct: 290 LKSPKVLKGHDDHVITCLQFCGNRIV-SGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQ 348
Query: 544 FSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVK 603
D ++I+ S D+T+K+W+ G C+ T GHTS+V R L ++VS D ++
Sbjct: 349 MR--DNIIISGSTDRTLKVWNAETGECIHTLYGHTSTV-RCMHLHE-KRVVSGSRDATLR 404
Query: 604 LWTVRTGECIATYDKHEDKIWALAV-GKKTEMFATGGSDALVNLWHDST 651
+W + TG+C+ H + + G++ +G D +V +W T
Sbjct: 405 VWDIETGQCLHVLMGHVAAVRCVQYDGRRV---VSGAYDFMVKVWDPET 450
Score = 198 (74.8 bits), Expect = 3.5e-12, P = 3.5e-12
Identities = 51/172 (29%), Positives = 81/172 (47%)
Query: 56 IEGGSD-TITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPSG 114
++G D IT L + + S ++VW T KCLR+ GH G +
Sbjct: 296 LKGHDDHVITCLQFCGNR--IVSGSDDNTLKVWSAVTGKCLRTLVGHTGGV--WSSQMRD 351
Query: 115 GLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWD 174
++ + DR + VW+ + G C H GH V + H +K ++ SGS DAT+RVWD
Sbjct: 352 NIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLH---EKRVV-SGSRDATLRVWD 407
Query: 175 LLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTV 226
+ +C+ L H + V + DG ++S D +V +WD +C T+
Sbjct: 408 IETGQCLHVLMGHVAAVR--CVQYDGRRVVSGAYDFMVKVWDPETETCLHTL 457
Score = 176 (67.0 bits), Expect = 5.5e-21, Sum P(2) = 5.5e-21
Identities = 40/147 (27%), Positives = 70/147 (47%)
Query: 505 NDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWS 564
++ V +GS+D T VW + + GH + V++ + V++ + D +K+W
Sbjct: 390 HEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYD--GRRVVSGAYDFMVKVWD 447
Query: 565 ISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIW 624
+CL T +GHT+ V F G +VS D +++W V TG CI T H+
Sbjct: 448 PETETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTS 505
Query: 625 ALAVGKKTEMFATGGSDALVNLWHDST 651
+ + K + +G +D+ V +W T
Sbjct: 506 GMEL--KDNILVSGNADSTVKIWDIKT 530
Score = 172 (65.6 bits), Expect = 2.4e-09, P = 2.4e-09
Identities = 43/139 (30%), Positives = 65/139 (46%)
Query: 514 QDRTACVWRLPDLVSVVTFRGHK-RGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLK 572
Q R WR +L S +GH I ++F +++ S D T+K+WS G CL+
Sbjct: 278 QHRIDTNWRRGELKSPKVLKGHDDHVITCLQFC--GNRIVSGSDDNTLKVWSAVTGKCLR 335
Query: 573 TFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKT 632
T GHT V + R I+S D +K+W TGECI T H + + + +K
Sbjct: 336 TLVGHTGGVWSSQM--RDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKR 393
Query: 633 EMFATGGSDALVNLWHDST 651
+ +G DA + +W T
Sbjct: 394 VV--SGSRDATLRVWDIET 410
Score = 170 (64.9 bits), Expect = 2.5e-20, Sum P(2) = 2.5e-20
Identities = 55/177 (31%), Positives = 82/177 (46%)
Query: 441 MGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSL 500
MG V AV + +VSG+ D +KVW D E L + H + SL
Sbjct: 418 MGHVAAVRCVQYDGRRVVSGAYDFMVKVW-------DPETETCLHT---LQGHTNRVYSL 467
Query: 501 AVAPNDSL-VCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKT 559
D + V +GS D + VW + + T GH+ +E D ++++ + D T
Sbjct: 468 QF---DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELK--DNILVSGNADST 522
Query: 560 IKIWSISDGSCLKTFEG---HTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECI 613
+KIW I G CL+T +G H S+V F +++ DG VKLW ++TGE I
Sbjct: 523 VKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNF--VITSSDDGTVKLWDLKTGEFI 577
Score = 160 (61.4 bits), Expect = 4.8e-08, P = 4.8e-08
Identities = 42/162 (25%), Positives = 74/162 (45%)
Query: 27 VSSDGSFIACACGE-SINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIR 85
V DG + + + + D + T++G ++ + +L D + S IR
Sbjct: 427 VQYDGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIR 484
Query: 86 VWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKG--- 142
VWD+ T C+ + GH GM + +L + AD V +WD+ G C +G
Sbjct: 485 VWDVETGNCIHTLTGHQSLTSGMELKDN--ILVSGNADSTVKIWDIKTGQCLQTLQGPNK 542
Query: 143 HKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATL 184
H+ V+ + F+ K+ + + SDD TV++WDL + + L
Sbjct: 543 HQSAVTCLQFN----KNFVITSSDDGTVKLWDLKTGEFIRNL 580
Score = 155 (59.6 bits), Expect = 5.8e-24, Sum P(2) = 5.8e-24
Identities = 45/151 (29%), Positives = 66/151 (43%)
Query: 76 FSSGHSREIRV---WDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVL-VWDV 131
+ S + R+ R+ W LK + KGHD I C G +G+D L VW
Sbjct: 271 WKSAYIRQHRIDTNWRRGELKSPKVLKGHDDHVI--TCLQFCGNRIVSGSDDNTLKVWSA 328
Query: 132 DGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRV 191
G C GH G V S + ++ SGS D T++VW+ +C+ TL H S V
Sbjct: 329 VTGKCLRTLVGHTGGVWSSQMRDN----IIISGSTDRTLKVWNAETGECIHTLYGHTSTV 384
Query: 192 TSMAITSDGSTLISAGRDKVVNLWDLRDYSC 222
M + ++S RD + +WD+ C
Sbjct: 385 RCMHLHE--KRVVSGSRDATLRVWDIETGQC 413
Score = 144 (55.7 bits), Expect = 1.5e-17, Sum P(2) = 1.5e-17
Identities = 44/171 (25%), Positives = 82/171 (47%)
Query: 405 CALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDH 464
C G+ +V+G+ D V++WD E+ C+ GH V ++ F +VSGS D
Sbjct: 426 CVQYDGR-RVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFDGI---HVVSGSLDT 481
Query: 465 TIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLP 524
+I+VW D E + + H + + S + D+++ +G+ D T +W +
Sbjct: 482 SIRVW-------DVETGNCIHT---LTGH-QSLTS-GMELKDNILVSGNADSTVKIWDIK 529
Query: 525 DLVSVVTFRG---HKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLK 572
+ T +G H+ + ++F+ VIT+S D T+K+W + G ++
Sbjct: 530 TGQCLQTLQGPNKHQSAVTCLQFNK--NFVITSSDDGTVKLWDLKTGEFIR 578
Score = 140 (54.3 bits), Expect = 7.1e-06, P = 7.1e-06
Identities = 71/313 (22%), Positives = 135/313 (43%)
Query: 167 DATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTV 226
D R +L + K + D H +T + G+ ++S D + +W C T
Sbjct: 282 DTNWRRGELKSPKVLKGHDDHV--ITCLQFC--GNRIVSGSDDNTLKVWSAVTGKCLRT- 336
Query: 227 PTYEMVEAVCAIPPGSAFDSFL-SSYNQQTIKK-KRRSLE-IHFITVGERGIVRMWNADS 283
+V + D+ + S +T+K + E IH + G VR +
Sbjct: 337 ----LVGHTGGVWSSQMRDNIIISGSTDRTLKVWNAETGECIHTL-YGHTSTVRCMHLHE 391
Query: 284 ACLYEQKSSDVTISFEMDDSKRGFTAATVLPSNQGLLCVTADQQLLL---YT-TVEVPEK 339
+ S D T+ + D + G ++ + CV D + ++ Y V+V +
Sbjct: 392 KRVVSG-SRDATL--RVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDP 448
Query: 340 KMELILSKRLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIV 399
+ E L L G+ + L+F G ++ T+I +V+D+ + +C + L GH +
Sbjct: 449 ETETCLHT-LQGHTNRVYSLQFDGIHVVSGSLDTSI---RVWDVETGNCIHTLTGHQSL- 503
Query: 400 LCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTG---HMGAVGAVAFSKKLQNF 456
T + ++V+G+ D++V++WD ++ C+ G H AV + F+K NF
Sbjct: 504 ----TSGMELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNK---NF 556
Query: 457 LVSGSSDHTIKVW 469
+++ S D T+K+W
Sbjct: 557 VITSSDDGTVKLW 569
>ASPGD|ASPL0000037303 [details] [associations]
symbol:copA species:162425 "Emericella nidulans"
[GO:0005794 "Golgi apparatus" evidence=IDA] [GO:0001411 "hyphal
tip" evidence=IDA] [GO:0030448 "hyphal growth" evidence=IMP]
[GO:0000280 "nuclear division" evidence=IMP] [GO:0005198
"structural molecule activity" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0030126 "COPI
vesicle coat" evidence=IEA] [GO:0043130 "ubiquitin binding"
evidence=IEA] [GO:0006890 "retrograde vesicle-mediated transport,
Golgi to ER" evidence=IEA] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR010714
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053 Pfam:PF06957
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0006886
GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005198 InterPro:IPR020472 PRINTS:PR00320
EMBL:BN001306 InterPro:IPR011047 SUPFAM:SSF50998 GO:GO:0030126
InterPro:IPR016391 PIRSF:PIRSF003354 OMA:YDQHNPF
ProteinModelPortal:C8VIU7 EnsemblFungi:CADANIAT00010053
Uniprot:C8VIU7
Length = 1205
Score = 221 (82.9 bits), Expect = 6.2e-24, Sum P(2) = 6.2e-24
Identities = 53/191 (27%), Positives = 81/191 (42%)
Query: 57 EGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPSGGL 116
E S +A P + S HS I++WD + ++ HDGP G+ HP+ L
Sbjct: 6 ESKSSRAKGIAFHPKRPWILVSLHSSTIQLWDYRMGTLIDRFEEHDGPVRGIDFHPTQPL 65
Query: 117 LATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLL 176
+ G D K+ VW+ C GH V ++ FHP+ + S SDD T+R+W+
Sbjct: 66 FVSGGDDYKIKVWNYQTRRCLFTLNGHLDYVRTVFFHPELP--WILSASDDQTIRIWNWQ 123
Query: 177 AKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYEMVEAVC 236
+ + T+ H V + SA D+ V +WD+ K + PT E
Sbjct: 124 NRSLICTMTGHNHYVMCAQFHPTEDLIASASLDQSVRIWDISGLRKKHSAPTTMSFEDQM 183
Query: 237 AIPPGSAFDSF 247
A + D F
Sbjct: 184 ARANNAQADMF 194
Score = 156 (60.0 bits), Expect = 6.7e-17, Sum P(2) = 6.7e-17
Identities = 36/133 (27%), Positives = 64/133 (48%)
Query: 95 LRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHP 154
L ++ A G+A HP + + + +WD G F+ H G V I FHP
Sbjct: 2 LTKFESKSSRAKGIAFHPKRPWILVSLHSSTIQLWDYRMGTLIDRFEEHDGPVRGIDFHP 61
Query: 155 DTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNL 214
+ L SG DD ++VW+ ++C+ TL+ H V ++ + ++SA D+ + +
Sbjct: 62 T--QPLFVSGGDDYKIKVWNYQTRRCLFTLNGHLDYVRTVFFHPELPWILSASDDQTIRI 119
Query: 215 WDLRDYS--CKLT 225
W+ ++ S C +T
Sbjct: 120 WNWQNRSLICTMT 132
Score = 152 (58.6 bits), Expect = 8.4e-07, P = 8.4e-07
Identities = 45/180 (25%), Positives = 76/180 (42%)
Query: 40 ESINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWK 99
++I I + N S+ T+ G + + P + L+ S+ + +R+WD+S L+ K
Sbjct: 115 QTIRIWNWQNRSLICTMTGHNHYVMCAQFHPTEDLIASASLDQSVRIWDISGLR-----K 169
Query: 100 GHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKS 159
H P M+ A AD + + D +GH V+ + FHP
Sbjct: 170 KHSAPTT-MSFEDQMARANNAQAD---MFGNTDA-VVKFVLEGHDRGVNWVAFHPSLP-- 222
Query: 160 LLFSGSDDATVRVWDLLAKKC--VATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDL 217
L+ S DD +++W + K V T HF ++ ++S G DK + WDL
Sbjct: 223 LIVSAGDDRLIKLWRMSDTKAWEVDTCRGHFQNASACLFHPHQDLILSVGEDKTIRAWDL 282
Score = 150 (57.9 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 58/203 (28%), Positives = 87/203 (42%)
Query: 447 VAFSKKLQNFLVSGSSDHTIKVWSFD-G-LSDDAEQPMNLKAKAVVAAHGKDINSLAVAP 504
+AF K LVS S TI++W + G L D E+ H + + P
Sbjct: 15 IAFHPKRPWILVSLHSS-TIQLWDYRMGTLIDRFEE------------HDGPVRGIDFHP 61
Query: 505 NDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWS 564
L +G D VW + T GH + +V F P +++AS D+TI+IW+
Sbjct: 62 TQPLFVSGGDDYKIKVWNYQTRRCLFTLNGHLDYVRTVFFHPELPWILSASDDQTIRIWN 121
Query: 565 ISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTV---RTGECIATYDKHED 621
+ S + T GH V+ A F I S D V++W + R T ED
Sbjct: 122 WQNRSLICTMTGHNHYVMCAQFHPTEDLIASASLDQSVRIWDISGLRKKHSAPTTMSFED 181
Query: 622 KIWALAVGKKTEMFATGGSDALV 644
++ A A + +MF G +DA+V
Sbjct: 182 QM-ARANNAQADMF--GNTDAVV 201
Score = 147 (56.8 bits), Expect = 6.2e-16, Sum P(2) = 6.2e-16
Identities = 47/176 (26%), Positives = 72/176 (40%)
Query: 41 SINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKG 100
+I + D ++ E + + P L S G +I+VW+ T +CL + G
Sbjct: 32 TIQLWDYRMGTLIDRFEEHDGPVRGIDFHPTQPLFVSGGDDYKIKVWNYQTRRCLFTLNG 91
Query: 101 HDGPAIGMACHPSGGLLATAGADRKVLVWDVDGG--FCTHYFKGHKGVVSSILFHPDTDK 158
H + HP + +A D+ + +W+ CT GH V FHP D
Sbjct: 92 HLDYVRTVFFHPELPWILSASDDQTIRIWNWQNRSLICT--MTGHNHYVMCAQFHPTED- 148
Query: 159 SLLFSGSDDATVRVWDL--LAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVV 212
L+ S S D +VR+WD+ L KK A F MA ++ + D VV
Sbjct: 149 -LIASASLDQSVRIWDISGLRKKHSAPTTMSFE--DQMARANNAQADMFGNTDAVV 201
Score = 144 (55.7 bits), Expect = 6.2e-24, Sum P(2) = 6.2e-24
Identities = 31/116 (26%), Positives = 53/116 (45%)
Query: 525 DLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSC--LKTFEGHTSSVL 582
D V GH RG+ V F P ++++A D+ IK+W +SD + T GH +
Sbjct: 198 DAVVKFVLEGHDRGVNWVAFHPSLPLIVSAGDDRLIKLWRMSDTKAWEVDTCRGHFQNAS 257
Query: 583 RASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATG 638
F I+S G D ++ W + + ++ + D+ W +A + +FA G
Sbjct: 258 ACLFHPHQDLILSVGEDKTIRAWDLNKRTPVQSFKRDVDRFWVIAAHPEINLFAAG 313
Score = 141 (54.7 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 35/153 (22%), Positives = 66/153 (43%)
Query: 414 IVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDG 473
I+ ++++LWD + H G V + F Q VSG D+ IKVW++
Sbjct: 24 ILVSLHSSTIQLWDYRMGTLIDRFEEHDGPVRGIDFHPT-QPLFVSGGDDYKIKVWNYQ- 81
Query: 474 LSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFR 533
+ + H + ++ P + + S D+T +W + + T
Sbjct: 82 ---------TRRCLFTLNGHLDYVRTVFFHPELPWILSASDDQTIRIWNWQNRSLICTMT 132
Query: 534 GHKRGIWSVEFSPVDQVVITASGDKTIKIWSIS 566
GH + +F P + ++ +AS D++++IW IS
Sbjct: 133 GHNHYVMCAQFHPTEDLIASASLDQSVRIWDIS 165
Score = 135 (52.6 bits), Expect = 5.7e-05, P = 5.7e-05
Identities = 38/121 (31%), Positives = 59/121 (48%)
Query: 99 KGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDG--GFCTHYFKGHKGVVSSILFHPDT 156
+GHD +A HPS L+ +AG DR + +W + + +GH S+ LFHP
Sbjct: 206 EGHDRGVNWVAFHPSLPLIVSAGDDRLIKLWRMSDTKAWEVDTCRGHFQNASACLFHPHQ 265
Query: 157 DKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWD 216
D L+ S +D T+R WDL + V + + R +A + L +AG D V ++
Sbjct: 266 D--LILSVGEDKTIRAWDLNKRTPVQSFKRDVDRFWVIAAHPE-INLFAAGHDTGVMVFK 322
Query: 217 L 217
L
Sbjct: 323 L 323
Score = 127 (49.8 bits), Expect = 0.00041, P = 0.00041
Identities = 32/150 (21%), Positives = 55/150 (36%)
Query: 500 LAVAPNDSLVCTGSQDRTACVW--RLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGD 557
+A P + T +W R+ L+ F H + ++F P + ++ D
Sbjct: 15 IAFHPKRPWILVSLHSSTIQLWDYRMGTLID--RFEEHDGPVRGIDFHPTQPLFVSGGDD 72
Query: 558 KTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYD 617
IK+W+ CL T GH V F I+S D +++W + I T
Sbjct: 73 YKIKVWNYQTRRCLFTLNGHLDYVRTVFFHPELPWILSASDDQTIRIWNWQNRSLICTMT 132
Query: 618 KHEDKIWALAVGKKTEMFATGGSDALVNLW 647
H + ++ A+ D V +W
Sbjct: 133 GHNHYVMCAQFHPTEDLIASASLDQSVRIW 162
Score = 118 (46.6 bits), Expect = 3.2e-21, Sum P(2) = 3.2e-21
Identities = 25/91 (27%), Positives = 49/91 (53%)
Query: 487 KAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVS--VVTFRGHKRGIWSVEF 544
K V+ H + +N +A P+ L+ + DR +WR+ D + V T RGH + + F
Sbjct: 202 KFVLEGHDRGVNWVAFHPSLPLIVSAGDDRLIKLWRMSDTKAWEVDTCRGHFQNASACLF 261
Query: 545 SPVDQVVITASGDKTIKIWSISDGSCLKTFE 575
P ++++ DKTI+ W ++ + +++F+
Sbjct: 262 HPHQDLILSVGEDKTIRAWDLNKRTPVQSFK 292
Score = 116 (45.9 bits), Expect = 1.0e-12, Sum P(2) = 1.0e-12
Identities = 27/114 (23%), Positives = 53/114 (46%)
Query: 413 LIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFD 472
L V+G D +++W+ ++R C+ GH+ V V F +L +++S S D TI++W++
Sbjct: 65 LFVSGGDDYKIKVWNYQTRRCLFTLNGHLDYVRTVFFHPELP-WILSASDDQTIRIWNWQ 123
Query: 473 GLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDL 526
N + H + P + L+ + S D++ +W + L
Sbjct: 124 ----------NRSLICTMTGHNHYVMCAQFHPTEDLIASASLDQSVRIWDISGL 167
Score = 109 (43.4 bits), Expect = 2.9e-13, Sum P(2) = 2.9e-13
Identities = 37/143 (25%), Positives = 61/143 (42%)
Query: 509 VCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDG 568
+ + S D+T +W + + T GH + +F P + ++ +AS D++++IW IS G
Sbjct: 108 ILSASDDQTIRIWNWQNRSLICTMTGHNHYVMCAQFHPTEDLIASASLDQSVRIWDIS-G 166
Query: 569 SCLKTFEGHTSSVLRASFLTRGAQIVSCG-ADGLVKLWTVRTGECIATYDKHEDKIWALA 627
K T S AQ G D +VK V G +D+ + W +A
Sbjct: 167 LRKKHSAPTTMSFEDQMARANNAQADMFGNTDAVVKF--VLEG-----HDRGVN--W-VA 216
Query: 628 VGKKTEMFATGGSDALVNLWHDS 650
+ + G D L+ LW S
Sbjct: 217 FHPSLPLIVSAGDDRLIKLWRMS 239
Score = 82 (33.9 bits), Expect = 1.8e-17, Sum P(2) = 1.8e-17
Identities = 29/121 (23%), Positives = 50/121 (41%)
Query: 439 GHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDIN 498
GH V VAF L +VS D IK+W +SD ++ H ++ +
Sbjct: 207 GHDRGVNWVAFHPSLP-LIVSAGDDRLIKLWR---MSDTKAWEVD-----TCRGHFQNAS 257
Query: 499 SLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDK 558
+ P+ L+ + +D+T W L V +F+ W + P ++ + A+G
Sbjct: 258 ACLFHPHQDLILSVGEDKTIRAWDLNKRTPVQSFKRDVDRFWVIAAHP--EINLFAAGHD 315
Query: 559 T 559
T
Sbjct: 316 T 316
>MGI|MGI:1354695 [details] [associations]
symbol:Fbxw7 "F-box and WD-40 domain protein 7"
species:10090 "Mus musculus" [GO:0001570 "vasculogenesis"
evidence=IMP] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA;TAS]
[GO:0005654 "nucleoplasm" evidence=ISO] [GO:0005730 "nucleolus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=TAS] [GO:0005783
"endoplasmic reticulum" evidence=IDA] [GO:0005794 "Golgi apparatus"
evidence=IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0006974 "response to DNA damage
stimulus" evidence=ISO] [GO:0007062 "sister chromatid cohesion"
evidence=ISO] [GO:0007219 "Notch signaling pathway" evidence=IDA]
[GO:0016567 "protein ubiquitination" evidence=ISO;ISA] [GO:0019005
"SCF ubiquitin ligase complex" evidence=ISO] [GO:0030324 "lung
development" evidence=IMP] [GO:0031146 "SCF-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISO]
[GO:0032876 "negative regulation of DNA endoreduplication"
evidence=ISO] [GO:0034644 "cellular response to UV" evidence=ISO]
[GO:0043234 "protein complex" evidence=ISO] [GO:0045741 "positive
regulation of epidermal growth factor-activated receptor activity"
evidence=ISO] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IDA] [GO:0050821 "protein stabilization" evidence=ISO]
[GO:0070374 "positive regulation of ERK1 and ERK2 cascade"
evidence=ISO] [GO:2000060 "positive regulation of protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=ISO] Reactome:REACT_93132 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294
SMART:SM00256 SMART:SM00320 MGI:MGI:1354695 GO:GO:0005783
GO:GO:0005634 GO:GO:0005794 GO:GO:0048471 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030324
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0016567 GO:GO:0001570
GO:GO:0019005 GO:GO:0031146 GeneTree:ENSGT00690000101849 KO:K10260
CTD:55294 HOVERGEN:HBG051596 OMA:EECLHTL EMBL:AF391202
EMBL:AF391193 EMBL:AF391194 EMBL:AF391195 EMBL:AF391196
EMBL:AF391197 EMBL:AF391198 EMBL:AF391199 EMBL:AF391200
EMBL:AF391201 EMBL:AF391192 EMBL:AF427101 EMBL:BC131648
EMBL:AK032174 IPI:IPI00162935 RefSeq:NP_536353.2 UniGene:Mm.196475
ProteinModelPortal:Q8VBV4 SMR:Q8VBV4 STRING:Q8VBV4 PRIDE:Q8VBV4
Ensembl:ENSMUST00000029727 GeneID:50754 KEGG:mmu:50754
UCSC:uc008pql.2 HOGENOM:HOG000236264 NextBio:307631 Bgee:Q8VBV4
Genevestigator:Q8VBV4 GermOnline:ENSMUSG00000028086 Uniprot:Q8VBV4
Length = 629
Score = 255 (94.8 bits), Expect = 2.1e-18, P = 2.1e-18
Identities = 67/231 (29%), Positives = 112/231 (48%)
Query: 391 VLAGHSE-IVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAF 449
VL GH + ++ CL C G IV+GS DN++++W + + C+ GH G V +
Sbjct: 297 VLKGHDDHVITCLQFC----GN-RIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWS--- 348
Query: 450 SKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLV 509
S+ N ++SGS+D T+KVW+ AE + + +G + ++ V
Sbjct: 349 SQMRDNIIISGSTDRTLKVWN-------AET-----GECIHTLYGHTSTVRCMHLHEKRV 396
Query: 510 CTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGS 569
+GS+D T VW + + GH + V++ + V++ + D +K+W +
Sbjct: 397 VSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYD--GRRVVSGAYDFMVKVWDPETET 454
Query: 570 CLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHE 620
CL T +GHT+ V F G +VS D +++W V TG CI T H+
Sbjct: 455 CLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQ 503
Score = 216 (81.1 bits), Expect = 3.8e-14, P = 3.8e-14
Identities = 58/210 (27%), Positives = 92/210 (43%)
Query: 30 DGSFIACACGESINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWDL 89
D I+ + ++ + + T+ G + T+ + L +K + S +RVWD+
Sbjct: 353 DNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLH--EKRVVSGSRDATLRVWDI 410
Query: 90 STLKCLRSWKGHDGPAIGMACHPSGGLLATAGA-DRKVLVWDVDGGFCTHYFKGHKGVVS 148
T +CL GH + C G +GA D V VWD + C H +GH V
Sbjct: 411 ETGQCLHVLMGH---VAAVRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVY 467
Query: 149 SILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGR 208
S+ F D + SGS D ++RVWD+ C+ TL H S + M + + L+S
Sbjct: 468 SLQF----DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDN--ILVSGNA 521
Query: 209 DKVVNLWDLRDYSCKLTV--PTYEMVEAVC 236
D V +WD++ C T+ P+ C
Sbjct: 522 DSTVKIWDIKTGQCLQTLQGPSKHQSAVTC 551
Score = 202 (76.2 bits), Expect = 7.7e-24, Sum P(2) = 7.7e-24
Identities = 56/194 (28%), Positives = 89/194 (45%)
Query: 457 LVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDR 516
+VSGS D T++VW D E L V+ H + V + V +G+ D
Sbjct: 396 VVSGSRDATLRVW-------DIETGQCLH---VLMGHVAAVR--CVQYDGRRVVSGAYDF 443
Query: 517 TACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEG 576
VW + T +GH ++S++F + V++ S D +I++W + G+C+ T G
Sbjct: 444 MVKVWDPETETCLHTLQGHTNRVYSLQFDGIH--VVSGSLDTSIRVWDVETGNCIHTLTG 501
Query: 577 HTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYD---KHEDKIWALAVGKKTE 633
H S L + + +VS AD VK+W ++TG+C+ T KH+ + L K
Sbjct: 502 HQS--LTSGMELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPSKHQSAVTCLQFNKN-- 557
Query: 634 MFATGGSDALVNLW 647
T D V LW
Sbjct: 558 FVITSSDDGTVKLW 571
Score = 201 (75.8 bits), Expect = 1.7e-12, P = 1.7e-12
Identities = 46/152 (30%), Positives = 78/152 (51%)
Query: 71 DDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGA-DRKVLVW 129
D + + S + ++VWD T CL + +GH + G+ +G+ D + VW
Sbjct: 432 DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFD---GIHVVSGSLDTSIRVW 488
Query: 130 DVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLD---K 186
DV+ G C H GH+ + S + + ++L SG+ D+TV++WD+ +C+ TL K
Sbjct: 489 DVETGNCIHTLTGHQSLTSGM----ELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPSK 544
Query: 187 HFSRVTSMAITSDGSTLISAGRDKVVNLWDLR 218
H S VT + + +I++ D V LWDL+
Sbjct: 545 HQSAVTCLQFNKN--FVITSSDDGTVKLWDLK 574
Score = 201 (75.8 bits), Expect = 1.7e-12, P = 1.7e-12
Identities = 48/169 (28%), Positives = 82/169 (48%)
Query: 484 LKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVE 543
LK+ V+ H + + + +V +GS D T VW + T GH G+WS +
Sbjct: 292 LKSPKVLKGHDDHVITCLQFCGNRIV-SGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQ 350
Query: 544 FSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVK 603
D ++I+ S D+T+K+W+ G C+ T GHTS+V R L ++VS D ++
Sbjct: 351 MR--DNIIISGSTDRTLKVWNAETGECIHTLYGHTSTV-RCMHLHE-KRVVSGSRDATLR 406
Query: 604 LWTVRTGECIATYDKHEDKIWALAV-GKKTEMFATGGSDALVNLWHDST 651
+W + TG+C+ H + + G++ +G D +V +W T
Sbjct: 407 VWDIETGQCLHVLMGHVAAVRCVQYDGRRV---VSGAYDFMVKVWDPET 452
Score = 198 (74.8 bits), Expect = 3.5e-12, P = 3.5e-12
Identities = 51/172 (29%), Positives = 81/172 (47%)
Query: 56 IEGGSD-TITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPSG 114
++G D IT L + + S ++VW T KCLR+ GH G +
Sbjct: 298 LKGHDDHVITCLQFCGNR--IVSGSDDNTLKVWSAVTGKCLRTLVGHTGGV--WSSQMRD 353
Query: 115 GLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWD 174
++ + DR + VW+ + G C H GH V + H +K ++ SGS DAT+RVWD
Sbjct: 354 NIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLH---EKRVV-SGSRDATLRVWD 409
Query: 175 LLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTV 226
+ +C+ L H + V + DG ++S D +V +WD +C T+
Sbjct: 410 IETGQCLHVLMGHVAAVR--CVQYDGRRVVSGAYDFMVKVWDPETETCLHTL 459
Score = 176 (67.0 bits), Expect = 5.6e-21, Sum P(2) = 5.6e-21
Identities = 40/147 (27%), Positives = 70/147 (47%)
Query: 505 NDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWS 564
++ V +GS+D T VW + + GH + V++ + V++ + D +K+W
Sbjct: 392 HEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYD--GRRVVSGAYDFMVKVWD 449
Query: 565 ISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIW 624
+CL T +GHT+ V F G +VS D +++W V TG CI T H+
Sbjct: 450 PETETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTS 507
Query: 625 ALAVGKKTEMFATGGSDALVNLWHDST 651
+ + K + +G +D+ V +W T
Sbjct: 508 GMEL--KDNILVSGNADSTVKIWDIKT 532
Score = 172 (65.6 bits), Expect = 2.4e-09, P = 2.4e-09
Identities = 43/139 (30%), Positives = 65/139 (46%)
Query: 514 QDRTACVWRLPDLVSVVTFRGHK-RGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLK 572
Q R WR +L S +GH I ++F +++ S D T+K+WS G CL+
Sbjct: 280 QHRIDTNWRRGELKSPKVLKGHDDHVITCLQFC--GNRIVSGSDDNTLKVWSAVTGKCLR 337
Query: 573 TFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKT 632
T GHT V + R I+S D +K+W TGECI T H + + + +K
Sbjct: 338 TLVGHTGGVWSSQM--RDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKR 395
Query: 633 EMFATGGSDALVNLWHDST 651
+ +G DA + +W T
Sbjct: 396 VV--SGSRDATLRVWDIET 412
Score = 170 (64.9 bits), Expect = 2.5e-20, Sum P(2) = 2.5e-20
Identities = 55/177 (31%), Positives = 82/177 (46%)
Query: 441 MGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSL 500
MG V AV + +VSG+ D +KVW D E L + H + SL
Sbjct: 420 MGHVAAVRCVQYDGRRVVSGAYDFMVKVW-------DPETETCLHT---LQGHTNRVYSL 469
Query: 501 AVAPNDSL-VCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKT 559
D + V +GS D + VW + + T GH+ +E D ++++ + D T
Sbjct: 470 QF---DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELK--DNILVSGNADST 524
Query: 560 IKIWSISDGSCLKTFEG---HTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECI 613
+KIW I G CL+T +G H S+V F +++ DG VKLW ++TGE I
Sbjct: 525 VKIWDIKTGQCLQTLQGPSKHQSAVTCLQFNKNF--VITSSDDGTVKLWDLKTGEFI 579
Score = 160 (61.4 bits), Expect = 4.8e-08, P = 4.8e-08
Identities = 42/162 (25%), Positives = 74/162 (45%)
Query: 27 VSSDGSFIACACGE-SINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIR 85
V DG + + + + D + T++G ++ + +L D + S IR
Sbjct: 429 VQYDGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIR 486
Query: 86 VWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKG--- 142
VWD+ T C+ + GH GM + +L + AD V +WD+ G C +G
Sbjct: 487 VWDVETGNCIHTLTGHQSLTSGMELKDN--ILVSGNADSTVKIWDIKTGQCLQTLQGPSK 544
Query: 143 HKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATL 184
H+ V+ + F+ K+ + + SDD TV++WDL + + L
Sbjct: 545 HQSAVTCLQFN----KNFVITSSDDGTVKLWDLKTGEFIRNL 582
Score = 155 (59.6 bits), Expect = 7.7e-24, Sum P(2) = 7.7e-24
Identities = 45/151 (29%), Positives = 66/151 (43%)
Query: 76 FSSGHSREIRV---WDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVL-VWDV 131
+ S + R+ R+ W LK + KGHD I C G +G+D L VW
Sbjct: 273 WKSAYIRQHRIDTNWRRGELKSPKVLKGHDDHVI--TCLQFCGNRIVSGSDDNTLKVWSA 330
Query: 132 DGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRV 191
G C GH G V S + ++ SGS D T++VW+ +C+ TL H S V
Sbjct: 331 VTGKCLRTLVGHTGGVWSSQMRDN----IIISGSTDRTLKVWNAETGECIHTLYGHTSTV 386
Query: 192 TSMAITSDGSTLISAGRDKVVNLWDLRDYSC 222
M + ++S RD + +WD+ C
Sbjct: 387 RCMHLHE--KRVVSGSRDATLRVWDIETGQC 415
Score = 144 (55.7 bits), Expect = 1.6e-17, Sum P(2) = 1.6e-17
Identities = 44/171 (25%), Positives = 82/171 (47%)
Query: 405 CALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDH 464
C G+ +V+G+ D V++WD E+ C+ GH V ++ F +VSGS D
Sbjct: 428 CVQYDGR-RVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFDGI---HVVSGSLDT 483
Query: 465 TIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLP 524
+I+VW D E + + H + + S + D+++ +G+ D T +W +
Sbjct: 484 SIRVW-------DVETGNCIHT---LTGH-QSLTS-GMELKDNILVSGNADSTVKIWDIK 531
Query: 525 DLVSVVTFRG---HKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLK 572
+ T +G H+ + ++F+ VIT+S D T+K+W + G ++
Sbjct: 532 TGQCLQTLQGPSKHQSAVTCLQFNK--NFVITSSDDGTVKLWDLKTGEFIR 580
Score = 140 (54.3 bits), Expect = 7.1e-06, P = 7.1e-06
Identities = 71/313 (22%), Positives = 135/313 (43%)
Query: 167 DATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTV 226
D R +L + K + D H +T + G+ ++S D + +W C T
Sbjct: 284 DTNWRRGELKSPKVLKGHDDHV--ITCLQFC--GNRIVSGSDDNTLKVWSAVTGKCLRT- 338
Query: 227 PTYEMVEAVCAIPPGSAFDSFL-SSYNQQTIKK-KRRSLE-IHFITVGERGIVRMWNADS 283
+V + D+ + S +T+K + E IH + G VR +
Sbjct: 339 ----LVGHTGGVWSSQMRDNIIISGSTDRTLKVWNAETGECIHTL-YGHTSTVRCMHLHE 393
Query: 284 ACLYEQKSSDVTISFEMDDSKRGFTAATVLPSNQGLLCVTADQQLLL---YT-TVEVPEK 339
+ S D T+ + D + G ++ + CV D + ++ Y V+V +
Sbjct: 394 KRVVSG-SRDATL--RVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDP 450
Query: 340 KMELILSKRLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIV 399
+ E L L G+ + L+F G ++ T+I +V+D+ + +C + L GH +
Sbjct: 451 ETETCLHT-LQGHTNRVYSLQFDGIHVVSGSLDTSI---RVWDVETGNCIHTLTGHQSL- 505
Query: 400 LCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTG---HMGAVGAVAFSKKLQNF 456
T + ++V+G+ D++V++WD ++ C+ G H AV + F+K NF
Sbjct: 506 ----TSGMELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPSKHQSAVTCLQFNK---NF 558
Query: 457 LVSGSSDHTIKVW 469
+++ S D T+K+W
Sbjct: 559 VITSSDDGTVKLW 571
>ASPGD|ASPL0000038644 [details] [associations]
symbol:AN10391 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001306
ProteinModelPortal:C8VHX7 EnsemblFungi:CADANIAT00009734 OMA:LQHTLEG
Uniprot:C8VHX7
Length = 577
Score = 303 (111.7 bits), Expect = 8.0e-24, P = 8.0e-24
Identities = 78/239 (32%), Positives = 117/239 (48%)
Query: 25 LVVSSDGSFIACACGESINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREI 84
++ S D +A A ++ I D S++ T+EG D + ++ S D +LL S+ +
Sbjct: 344 VIFSHDSRLLASASDSTVKIWDTGTGSLQHTLEGHRDWVRSVIFSHDSQLLASASDDSTV 403
Query: 85 RVWDLSTLKCLRSWKGH-DGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGH 143
++WD T + +GH D + H S LLA+A D V +WD G H +GH
Sbjct: 404 KIWDTGTGSLQHTLEGHRDWVRSVIFSHDSQ-LLASASDDSTVKIWDTGTGSLQHTLEGH 462
Query: 144 KGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTL 203
+ V S++F D+ LL S SDD TVR+WD TL+ H S VTS++ + D L
Sbjct: 463 RDWVRSVIFSHDS--RLLASASDDRTVRIWDTEKGSHKHTLEGHSSLVTSVSFSHDSRLL 520
Query: 204 ISAGRDKVVNLWDLRDYSCKLTVPTYEMVEAVCAIPPGSAFDSFLSSYNQQTIKKKRRS 262
SA D+ V +WD+ S + T +EA+ FD S + Q T+K RS
Sbjct: 521 ASASNDQTVRIWDIEARSLQHTFDLDATIEAM-------RFDKATSLWIQVTVKASIRS 572
Score = 277 (102.6 bits), Expect = 6.2e-21, P = 6.2e-21
Identities = 78/250 (31%), Positives = 119/250 (47%)
Query: 14 PVLQQFYGGGPLVVS----SDGSFIACACGE-SINIVDLSNASIKSTIEGGSDTITALAL 68
P LQ G V+S D +A A + ++ I D S++ T+EG SD + ++
Sbjct: 287 PCLQALEGHEAAVLSVSYSHDSRLLASASDDRTVKIWDTETGSLQHTLEGHSDLVRSVIF 346
Query: 69 SPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGH-DGPAIGMACHPSGGLLATAGADRKVL 127
S D +LL S+ S +++WD T + +GH D + H S LLA+A D V
Sbjct: 347 SHDSRLLASASDST-VKIWDTGTGSLQHTLEGHRDWVRSVIFSHDSQ-LLASASDDSTVK 404
Query: 128 VWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKH 187
+WD G H +GH+ V S++F D+ LL S SDD+TV++WD TL+ H
Sbjct: 405 IWDTGTGSLQHTLEGHRDWVRSVIFSHDSQ--LLASASDDSTVKIWDTGTGSLQHTLEGH 462
Query: 188 FSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYEMVEAVCAIPPGSAFDSF 247
V S+ + D L SA D+ V +WD S K T+ + + + S
Sbjct: 463 RDWVRSVIFSHDSRLLASASDDRTVRIWDTEKGSHKHTLEGHSSLVTSVSFSHDSRL--L 520
Query: 248 LSSYNQQTIK 257
S+ N QT++
Sbjct: 521 ASASNDQTVR 530
Score = 260 (96.6 bits), Expect = 4.7e-19, P = 4.7e-19
Identities = 76/287 (26%), Positives = 131/287 (45%)
Query: 349 LVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALS 408
L G+ +L + + + + LA A++ V+++D + S + L GHS++V + S
Sbjct: 292 LEGHEAAVLSVSY-SHDSRLLASASDDRTVKIWDTETGSLQHTLEGHSDLVRSV---IFS 347
Query: 409 SGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKV 468
L+ + S D++V++WD+ + GH V +V FS Q L S S D T+K+
Sbjct: 348 HDSRLLASAS-DSTVKIWDTGTGSLQHTLEGHRDWVRSVIFSHDSQ-LLASASDDSTVKI 405
Query: 469 WSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVS 528
W G + + H + S+ + + L+ + S D T +W
Sbjct: 406 WD-TGTGS---------LQHTLEGHRDWVRSVIFSHDSQLLASASDDSTVKIWDTGTGSL 455
Query: 529 VVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLT 588
T GH+ + SV FS +++ +AS D+T++IW GS T EGH+S V SF
Sbjct: 456 QHTLEGHRDWVRSVIFSHDSRLLASASDDRTVRIWDTEKGSHKHTLEGHSSLVTSVSFSH 515
Query: 589 RGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMF 635
+ S D V++W + T+D + I A+ K T ++
Sbjct: 516 DSRLLASASNDQTVRIWDIEARSLQHTFDL-DATIEAMRFDKATSLW 561
Score = 252 (93.8 bits), Expect = 3.6e-18, P = 3.6e-18
Identities = 68/260 (26%), Positives = 112/260 (43%)
Query: 388 CSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAV 447
C L GH VL + + S L+ + S D +V++WD+E+ GH V +V
Sbjct: 288 CLQALEGHEAAVLSV---SYSHDSRLLASASDDRTVKIWDTETGSLQHTLEGHSDLVRSV 344
Query: 448 AFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDS 507
FS + L++ +SD T+K+W G + + H + S+ + +
Sbjct: 345 IFSHDSR--LLASASDSTVKIWD-TGTGS---------LQHTLEGHRDWVRSVIFSHDSQ 392
Query: 508 LVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISD 567
L+ + S D T +W T GH+ + SV FS Q++ +AS D T+KIW
Sbjct: 393 LLASASDDSTVKIWDTGTGSLQHTLEGHRDWVRSVIFSHDSQLLASASDDSTVKIWDTGT 452
Query: 568 GSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALA 627
GS T EGH V F + S D V++W G T + H + +++
Sbjct: 453 GSLQHTLEGHRDWVRSVIFSHDSRLLASASDDRTVRIWDTEKGSHKHTLEGHSSLVTSVS 512
Query: 628 VGKKTEMFATGGSDALVNLW 647
+ + A+ +D V +W
Sbjct: 513 FSHDSRLLASASNDQTVRIW 532
Score = 205 (77.2 bits), Expect = 5.2e-13, P = 5.2e-13
Identities = 76/257 (29%), Positives = 121/257 (47%)
Query: 64 TALALSPDDKL---LFSSGHSREIRVW-DLST--LKCLRSWKGHDGPAIGMACHPSGGLL 117
+AL SP D L LF I D++ CL++ +GH+ + ++ LL
Sbjct: 252 SALVFSPADSLIRKLFGKEEPNWIETKPDVANHWSPCLQALEGHEAAVLSVSYSHDSRLL 311
Query: 118 ATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLA 177
A+A DR V +WD + G H +GH +V S++F D S L + + D+TV++WD
Sbjct: 312 ASASDDRTVKIWDTETGSLQHTLEGHSDLVRSVIFSHD---SRLLASASDSTVKIWDTGT 368
Query: 178 KKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTY-EMVEAVC 236
TL+ H V S+ + D L SA D V +WD S + T+ + + V +V
Sbjct: 369 GSLQHTLEGHRDWVRSVIFSHDSQLLASASDDSTVKIWDTGTGSLQHTLEGHRDWVRSVI 428
Query: 237 AIPPGSAFDSFL--SSYNQQTIK---KKRRSLEIHFITVGERGIVR--MWNADSACLYEQ 289
+ DS L S+ + T+K SL+ H + G R VR +++ DS L
Sbjct: 429 F-----SHDSQLLASASDDSTVKIWDTGTGSLQ-HTLE-GHRDWVRSVIFSHDSRLL-AS 480
Query: 290 KSSDVTISFEMDDSKRG 306
S D T+ + D+++G
Sbjct: 481 ASDDRTV--RIWDTEKG 495
Score = 188 (71.2 bits), Expect = 3.7e-11, P = 3.7e-11
Identities = 46/160 (28%), Positives = 76/160 (47%)
Query: 493 HGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVI 552
H + S++ + + L+ + S DRT +W T GH + SV FS +++
Sbjct: 295 HEAAVLSVSYSHDSRLLASASDDRTVKIWDTETGSLQHTLEGHSDLVRSVIFSHDSRLLA 354
Query: 553 TASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIV-SCGADGLVKLWTVRTGE 611
+AS D T+KIW GS T EGH V R+ + +Q++ S D VK+W TG
Sbjct: 355 SAS-DSTVKIWDTGTGSLQHTLEGHRDWV-RSVIFSHDSQLLASASDDSTVKIWDTGTGS 412
Query: 612 CIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLWHDST 651
T + H D + ++ +++ A+ D+ V +W T
Sbjct: 413 LQHTLEGHRDWVRSVIFSHDSQLLASASDDSTVKIWDTGT 452
>UNIPROTKB|Q969H0 [details] [associations]
symbol:FBXW7 "F-box/WD repeat-containing protein 7"
species:9606 "Homo sapiens" [GO:0019048 "virus-host interaction"
evidence=IEA] [GO:0001570 "vasculogenesis" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=IEA]
[GO:0030324 "lung development" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA;IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005654 "nucleoplasm" evidence=IDA;TAS]
[GO:0016567 "protein ubiquitination" evidence=IDA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IDA] [GO:0019005 "SCF ubiquitin ligase complex"
evidence=IDA] [GO:0043234 "protein complex" evidence=IDA]
[GO:0006974 "response to DNA damage stimulus" evidence=IDA]
[GO:0034644 "cellular response to UV" evidence=IDA] [GO:0007219
"Notch signaling pathway" evidence=TAS] [GO:0032876 "negative
regulation of DNA endoreduplication" evidence=IMP] [GO:0007062
"sister chromatid cohesion" evidence=IMP] [GO:0045741 "positive
regulation of epidermal growth factor-activated receptor activity"
evidence=IDA] [GO:2000060 "positive regulation of protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=IDA] [GO:0050821 "protein stabilization"
evidence=IDA] [GO:0070374 "positive regulation of ERK1 and ERK2
cascade" evidence=IMP] [GO:2000346 "negative regulation of
hepatocyte proliferation" evidence=ISS] [GO:0055088 "lipid
homeostasis" evidence=ISS] [GO:0032880 "regulation of protein
localization" evidence=ISS] [GO:0010883 "regulation of lipid
storage" evidence=ISS] [GO:0010868 "negative regulation of
triglyceride biosynthetic process" evidence=ISS] [GO:0001944
"vasculature development" evidence=TAS] [GO:0045746 "negative
regulation of Notch signaling pathway" evidence=ISS] [GO:2000639
"negative regulation of SREBP signaling pathway" evidence=ISS]
Reactome:REACT_17015 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
GO:GO:0005783 GO:GO:0005794 Reactome:REACT_111102
Reactome:REACT_6900 GO:GO:0019048 GO:GO:0043234 GO:GO:0050821
GO:GO:0005654 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219
GO:GO:0045741 GO:GO:0003700 GO:GO:0032880 SUPFAM:SSF81383
GO:GO:0006974 GO:GO:0016567 GO:GO:0055088 GO:GO:0019005
GO:GO:0034644 GO:GO:0001944 GO:GO:0032876 GO:GO:0010883
GO:GO:2000060 GO:GO:0045746 GO:GO:0031146 GO:GO:0007062 KO:K10260
EMBL:AY033553 EMBL:AF383178 EMBL:AY008274 EMBL:AF411971
EMBL:AF411972 EMBL:AY049984 EMBL:AK001933 EMBL:CR749305
EMBL:BC037320 EMBL:BC117244 EMBL:BC117246 EMBL:BC143944
IPI:IPI00056349 IPI:IPI00059165 IPI:IPI00075075 IPI:IPI00402151
RefSeq:NP_001013433.1 RefSeq:NP_060785.2 RefSeq:NP_361014.1
UniGene:Hs.561245 UniGene:Hs.717081 PDB:2OVP PDB:2OVQ PDB:2OVR
PDBsum:2OVP PDBsum:2OVQ PDBsum:2OVR ProteinModelPortal:Q969H0
SMR:Q969H0 DIP:DIP-27613N IntAct:Q969H0 MINT:MINT-276696
STRING:Q969H0 PhosphoSite:Q969H0 DMDM:44887885 PaxDb:Q969H0
PRIDE:Q969H0 DNASU:55294 Ensembl:ENST00000263981
Ensembl:ENST00000281708 Ensembl:ENST00000296555 GeneID:55294
KEGG:hsa:55294 UCSC:uc003imq.3 UCSC:uc003imr.3 UCSC:uc003ims.3
CTD:55294 GeneCards:GC04M153242 HGNC:HGNC:16712 HPA:CAB013793
HPA:CAB029987 MIM:606278 neXtProt:NX_Q969H0 PharmGKB:PA28054
HOVERGEN:HBG051596 InParanoid:Q969H0 OMA:EECLHTL OrthoDB:EOG4MKNFW
PhylomeDB:Q969H0 EvolutionaryTrace:Q969H0 GenomeRNAi:55294
NextBio:59488 ArrayExpress:Q969H0 Bgee:Q969H0 CleanEx:HS_FBXW7
Genevestigator:Q969H0 GermOnline:ENSG00000109670 GO:GO:2000346
GO:GO:2000639 GO:GO:0010868 Uniprot:Q969H0
Length = 707
Score = 255 (94.8 bits), Expect = 2.6e-18, P = 2.6e-18
Identities = 67/231 (29%), Positives = 112/231 (48%)
Query: 391 VLAGHSE-IVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAF 449
VL GH + ++ CL C G IV+GS DN++++W + + C+ GH G V +
Sbjct: 375 VLKGHDDHVITCLQFC----GN-RIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWS--- 426
Query: 450 SKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLV 509
S+ N ++SGS+D T+KVW+ AE + + +G + ++ V
Sbjct: 427 SQMRDNIIISGSTDRTLKVWN-------AET-----GECIHTLYGHTSTVRCMHLHEKRV 474
Query: 510 CTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGS 569
+GS+D T VW + + GH + V++ + V++ + D +K+W +
Sbjct: 475 VSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYD--GRRVVSGAYDFMVKVWDPETET 532
Query: 570 CLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHE 620
CL T +GHT+ V F G +VS D +++W V TG CI T H+
Sbjct: 533 CLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQ 581
Score = 215 (80.7 bits), Expect = 6.1e-14, P = 6.1e-14
Identities = 56/198 (28%), Positives = 89/198 (44%)
Query: 30 DGSFIACACGESINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWDL 89
D I+ + ++ + + T+ G + T+ + L +K + S +RVWD+
Sbjct: 431 DNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLH--EKRVVSGSRDATLRVWDI 488
Query: 90 STLKCLRSWKGHDGPAIGMACHPSGGLLATAGA-DRKVLVWDVDGGFCTHYFKGHKGVVS 148
T +CL GH + C G +GA D V VWD + C H +GH V
Sbjct: 489 ETGQCLHVLMGH---VAAVRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVY 545
Query: 149 SILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGR 208
S+ F D + SGS D ++RVWD+ C+ TL H S + M + + L+S
Sbjct: 546 SLQF----DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDN--ILVSGNA 599
Query: 209 DKVVNLWDLRDYSCKLTV 226
D V +WD++ C T+
Sbjct: 600 DSTVKIWDIKTGQCLQTL 617
Score = 203 (76.5 bits), Expect = 8.8e-24, Sum P(2) = 8.8e-24
Identities = 56/194 (28%), Positives = 90/194 (46%)
Query: 457 LVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDR 516
+VSGS D T++VW D E L V+ H + V + V +G+ D
Sbjct: 474 VVSGSRDATLRVW-------DIETGQCLH---VLMGHVAAVR--CVQYDGRRVVSGAYDF 521
Query: 517 TACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEG 576
VW + T +GH ++S++F + V++ S D +I++W + G+C+ T G
Sbjct: 522 MVKVWDPETETCLHTLQGHTNRVYSLQFDGIH--VVSGSLDTSIRVWDVETGNCIHTLTG 579
Query: 577 HTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATY---DKHEDKIWALAVGKKTE 633
H S L + + +VS AD VK+W ++TG+C+ T +KH+ + L K
Sbjct: 580 HQS--LTSGMELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKN-- 635
Query: 634 MFATGGSDALVNLW 647
T D V LW
Sbjct: 636 FVITSSDDGTVKLW 649
Score = 202 (76.2 bits), Expect = 1.6e-12, P = 1.6e-12
Identities = 46/152 (30%), Positives = 79/152 (51%)
Query: 71 DDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGA-DRKVLVW 129
D + + S + ++VWD T CL + +GH + G+ +G+ D + VW
Sbjct: 510 DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFD---GIHVVSGSLDTSIRVW 566
Query: 130 DVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATL---DK 186
DV+ G C H GH+ + S + + ++L SG+ D+TV++WD+ +C+ TL +K
Sbjct: 567 DVETGNCIHTLTGHQSLTSGM----ELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPNK 622
Query: 187 HFSRVTSMAITSDGSTLISAGRDKVVNLWDLR 218
H S VT + + +I++ D V LWDL+
Sbjct: 623 HQSAVTCLQFNKN--FVITSSDDGTVKLWDLK 652
Score = 201 (75.8 bits), Expect = 2.0e-12, P = 2.0e-12
Identities = 48/169 (28%), Positives = 82/169 (48%)
Query: 484 LKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVE 543
LK+ V+ H + + + +V +GS D T VW + T GH G+WS +
Sbjct: 370 LKSPKVLKGHDDHVITCLQFCGNRIV-SGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQ 428
Query: 544 FSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVK 603
D ++I+ S D+T+K+W+ G C+ T GHTS+V R L ++VS D ++
Sbjct: 429 MR--DNIIISGSTDRTLKVWNAETGECIHTLYGHTSTV-RCMHLHE-KRVVSGSRDATLR 484
Query: 604 LWTVRTGECIATYDKHEDKIWALAV-GKKTEMFATGGSDALVNLWHDST 651
+W + TG+C+ H + + G++ +G D +V +W T
Sbjct: 485 VWDIETGQCLHVLMGHVAAVRCVQYDGRRV---VSGAYDFMVKVWDPET 530
Score = 198 (74.8 bits), Expect = 4.3e-12, P = 4.3e-12
Identities = 51/172 (29%), Positives = 81/172 (47%)
Query: 56 IEGGSD-TITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPSG 114
++G D IT L + + S ++VW T KCLR+ GH G +
Sbjct: 376 LKGHDDHVITCLQFCGNR--IVSGSDDNTLKVWSAVTGKCLRTLVGHTGGV--WSSQMRD 431
Query: 115 GLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWD 174
++ + DR + VW+ + G C H GH V + H +K ++ SGS DAT+RVWD
Sbjct: 432 NIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLH---EKRVV-SGSRDATLRVWD 487
Query: 175 LLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTV 226
+ +C+ L H + V + DG ++S D +V +WD +C T+
Sbjct: 488 IETGQCLHVLMGHVAAVR--CVQYDGRRVVSGAYDFMVKVWDPETETCLHTL 537
Score = 176 (67.0 bits), Expect = 8.0e-21, Sum P(2) = 8.0e-21
Identities = 40/147 (27%), Positives = 70/147 (47%)
Query: 505 NDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWS 564
++ V +GS+D T VW + + GH + V++ + V++ + D +K+W
Sbjct: 470 HEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYD--GRRVVSGAYDFMVKVWD 527
Query: 565 ISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIW 624
+CL T +GHT+ V F G +VS D +++W V TG CI T H+
Sbjct: 528 PETETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTS 585
Query: 625 ALAVGKKTEMFATGGSDALVNLWHDST 651
+ + K + +G +D+ V +W T
Sbjct: 586 GMEL--KDNILVSGNADSTVKIWDIKT 610
Score = 172 (65.6 bits), Expect = 2.8e-09, P = 2.8e-09
Identities = 43/139 (30%), Positives = 65/139 (46%)
Query: 514 QDRTACVWRLPDLVSVVTFRGHK-RGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLK 572
Q R WR +L S +GH I ++F +++ S D T+K+WS G CL+
Sbjct: 358 QHRIDTNWRRGELKSPKVLKGHDDHVITCLQFC--GNRIVSGSDDNTLKVWSAVTGKCLR 415
Query: 573 TFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKT 632
T GHT V + R I+S D +K+W TGECI T H + + + +K
Sbjct: 416 TLVGHTGGVWSSQM--RDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKR 473
Query: 633 EMFATGGSDALVNLWHDST 651
+ +G DA + +W T
Sbjct: 474 VV--SGSRDATLRVWDIET 490
Score = 170 (64.9 bits), Expect = 3.6e-20, Sum P(2) = 3.6e-20
Identities = 55/177 (31%), Positives = 82/177 (46%)
Query: 441 MGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSL 500
MG V AV + +VSG+ D +KVW D E L + H + SL
Sbjct: 498 MGHVAAVRCVQYDGRRVVSGAYDFMVKVW-------DPETETCLHT---LQGHTNRVYSL 547
Query: 501 AVAPNDSL-VCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKT 559
D + V +GS D + VW + + T GH+ +E D ++++ + D T
Sbjct: 548 QF---DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELK--DNILVSGNADST 602
Query: 560 IKIWSISDGSCLKTFEG---HTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECI 613
+KIW I G CL+T +G H S+V F +++ DG VKLW ++TGE I
Sbjct: 603 VKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNF--VITSSDDGTVKLWDLKTGEFI 657
Score = 160 (61.4 bits), Expect = 5.7e-08, P = 5.7e-08
Identities = 42/162 (25%), Positives = 74/162 (45%)
Query: 27 VSSDGSFIACACGE-SINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIR 85
V DG + + + + D + T++G ++ + +L D + S IR
Sbjct: 507 VQYDGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIR 564
Query: 86 VWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKG--- 142
VWD+ T C+ + GH GM + +L + AD V +WD+ G C +G
Sbjct: 565 VWDVETGNCIHTLTGHQSLTSGMELKDN--ILVSGNADSTVKIWDIKTGQCLQTLQGPNK 622
Query: 143 HKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATL 184
H+ V+ + F+ K+ + + SDD TV++WDL + + L
Sbjct: 623 HQSAVTCLQFN----KNFVITSSDDGTVKLWDLKTGEFIRNL 660
Score = 155 (59.6 bits), Expect = 8.8e-24, Sum P(2) = 8.8e-24
Identities = 45/151 (29%), Positives = 66/151 (43%)
Query: 76 FSSGHSREIRV---WDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVL-VWDV 131
+ S + R+ R+ W LK + KGHD I C G +G+D L VW
Sbjct: 351 WKSAYIRQHRIDTNWRRGELKSPKVLKGHDDHVI--TCLQFCGNRIVSGSDDNTLKVWSA 408
Query: 132 DGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRV 191
G C GH G V S + ++ SGS D T++VW+ +C+ TL H S V
Sbjct: 409 VTGKCLRTLVGHTGGVWSSQMRDN----IIISGSTDRTLKVWNAETGECIHTLYGHTSTV 464
Query: 192 TSMAITSDGSTLISAGRDKVVNLWDLRDYSC 222
M + ++S RD + +WD+ C
Sbjct: 465 RCMHLHE--KRVVSGSRDATLRVWDIETGQC 493
Score = 144 (55.7 bits), Expect = 2.2e-17, Sum P(2) = 2.2e-17
Identities = 44/171 (25%), Positives = 82/171 (47%)
Query: 405 CALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDH 464
C G+ +V+G+ D V++WD E+ C+ GH V ++ F +VSGS D
Sbjct: 506 CVQYDGR-RVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFDGI---HVVSGSLDT 561
Query: 465 TIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLP 524
+I+VW D E + + H + + S + D+++ +G+ D T +W +
Sbjct: 562 SIRVW-------DVETGNCIHT---LTGH-QSLTS-GMELKDNILVSGNADSTVKIWDIK 609
Query: 525 DLVSVVTFRG---HKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLK 572
+ T +G H+ + ++F+ VIT+S D T+K+W + G ++
Sbjct: 610 TGQCLQTLQGPNKHQSAVTCLQFNK--NFVITSSDDGTVKLWDLKTGEFIR 658
Score = 140 (54.3 bits), Expect = 8.4e-06, P = 8.4e-06
Identities = 71/313 (22%), Positives = 135/313 (43%)
Query: 167 DATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTV 226
D R +L + K + D H +T + G+ ++S D + +W C T
Sbjct: 362 DTNWRRGELKSPKVLKGHDDHV--ITCLQFC--GNRIVSGSDDNTLKVWSAVTGKCLRT- 416
Query: 227 PTYEMVEAVCAIPPGSAFDSFL-SSYNQQTIKK-KRRSLE-IHFITVGERGIVRMWNADS 283
+V + D+ + S +T+K + E IH + G VR +
Sbjct: 417 ----LVGHTGGVWSSQMRDNIIISGSTDRTLKVWNAETGECIHTL-YGHTSTVRCMHLHE 471
Query: 284 ACLYEQKSSDVTISFEMDDSKRGFTAATVLPSNQGLLCVTADQQLLL---YT-TVEVPEK 339
+ S D T+ + D + G ++ + CV D + ++ Y V+V +
Sbjct: 472 KRVVSG-SRDATL--RVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDP 528
Query: 340 KMELILSKRLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIV 399
+ E L L G+ + L+F G ++ T+I +V+D+ + +C + L GH +
Sbjct: 529 ETETCLHT-LQGHTNRVYSLQFDGIHVVSGSLDTSI---RVWDVETGNCIHTLTGHQSL- 583
Query: 400 LCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTG---HMGAVGAVAFSKKLQNF 456
T + ++V+G+ D++V++WD ++ C+ G H AV + F+K NF
Sbjct: 584 ----TSGMELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNK---NF 636
Query: 457 LVSGSSDHTIKVW 469
+++ S D T+K+W
Sbjct: 637 VITSSDDGTVKLW 649
>UNIPROTKB|E2QUZ3 [details] [associations]
symbol:FBXW7 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:2000060 "positive regulation of protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0070374 "positive regulation of ERK1 and
ERK2 cascade" evidence=IEA] [GO:0050821 "protein stabilization"
evidence=IEA] [GO:0045741 "positive regulation of epidermal growth
factor-activated receptor activity" evidence=IEA] [GO:0034644
"cellular response to UV" evidence=IEA] [GO:0032876 "negative
regulation of DNA endoreduplication" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0030324 "lung development" evidence=IEA]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0007219
"Notch signaling pathway" evidence=IEA] [GO:0007062 "sister
chromatid cohesion" evidence=IEA] [GO:0006974 "response to DNA
damage stimulus" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0001570 "vasculogenesis" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 GO:GO:0005783
GO:GO:0005794 GO:GO:0050821 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219 GO:GO:0045741
GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0006974 GO:GO:0016567
GO:GO:0019005 GO:GO:0034644 GO:GO:0032876 GO:GO:2000060
GO:GO:0031146 GO:GO:0007062 GeneTree:ENSGT00690000101849 KO:K10260
CTD:55294 OMA:EECLHTL EMBL:AAEX03010045 RefSeq:XP_867701.2
Ensembl:ENSCAFT00000012962 GeneID:475465 KEGG:cfa:475465
NextBio:20851305 Uniprot:E2QUZ3
Length = 712
Score = 255 (94.8 bits), Expect = 2.7e-18, P = 2.7e-18
Identities = 67/231 (29%), Positives = 112/231 (48%)
Query: 391 VLAGHSE-IVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAF 449
VL GH + ++ CL C G IV+GS DN++++W + + C+ GH G V +
Sbjct: 380 VLKGHDDHVITCLQFC----GN-RIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWS--- 431
Query: 450 SKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLV 509
S+ N ++SGS+D T+KVW+ AE + + +G + ++ V
Sbjct: 432 SQMRDNIIISGSTDRTLKVWN-------AET-----GECIHTLYGHTSTVRCMHLHEKRV 479
Query: 510 CTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGS 569
+GS+D T VW + + GH + V++ + V++ + D +K+W +
Sbjct: 480 VSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYD--GRRVVSGAYDFMVKVWDPETET 537
Query: 570 CLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHE 620
CL T +GHT+ V F G +VS D +++W V TG CI T H+
Sbjct: 538 CLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQ 586
Score = 215 (80.7 bits), Expect = 6.1e-14, P = 6.1e-14
Identities = 56/198 (28%), Positives = 89/198 (44%)
Query: 30 DGSFIACACGESINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWDL 89
D I+ + ++ + + T+ G + T+ + L +K + S +RVWD+
Sbjct: 436 DNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLH--EKRVVSGSRDATLRVWDI 493
Query: 90 STLKCLRSWKGHDGPAIGMACHPSGGLLATAGA-DRKVLVWDVDGGFCTHYFKGHKGVVS 148
T +CL GH + C G +GA D V VWD + C H +GH V
Sbjct: 494 ETGQCLHVLMGH---VAAVRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVY 550
Query: 149 SILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGR 208
S+ F D + SGS D ++RVWD+ C+ TL H S + M + + L+S
Sbjct: 551 SLQF----DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDN--ILVSGNA 604
Query: 209 DKVVNLWDLRDYSCKLTV 226
D V +WD++ C T+
Sbjct: 605 DSTVKIWDIKTGQCLQTL 622
Score = 203 (76.5 bits), Expect = 9.0e-24, Sum P(2) = 9.0e-24
Identities = 56/194 (28%), Positives = 90/194 (46%)
Query: 457 LVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDR 516
+VSGS D T++VW D E L V+ H + V + V +G+ D
Sbjct: 479 VVSGSRDATLRVW-------DIETGQCLH---VLMGHVAAVR--CVQYDGRRVVSGAYDF 526
Query: 517 TACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEG 576
VW + T +GH ++S++F + V++ S D +I++W + G+C+ T G
Sbjct: 527 MVKVWDPETETCLHTLQGHTNRVYSLQFDGIH--VVSGSLDTSIRVWDVETGNCIHTLTG 584
Query: 577 HTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATY---DKHEDKIWALAVGKKTE 633
H S L + + +VS AD VK+W ++TG+C+ T +KH+ + L K
Sbjct: 585 HQS--LTSGMELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKN-- 640
Query: 634 MFATGGSDALVNLW 647
T D V LW
Sbjct: 641 FVITSSDDGTVKLW 654
Score = 202 (76.2 bits), Expect = 1.6e-12, P = 1.6e-12
Identities = 46/152 (30%), Positives = 79/152 (51%)
Query: 71 DDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGA-DRKVLVW 129
D + + S + ++VWD T CL + +GH + G+ +G+ D + VW
Sbjct: 515 DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFD---GIHVVSGSLDTSIRVW 571
Query: 130 DVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATL---DK 186
DV+ G C H GH+ + S + + ++L SG+ D+TV++WD+ +C+ TL +K
Sbjct: 572 DVETGNCIHTLTGHQSLTSGM----ELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPNK 627
Query: 187 HFSRVTSMAITSDGSTLISAGRDKVVNLWDLR 218
H S VT + + +I++ D V LWDL+
Sbjct: 628 HQSAVTCLQFNKN--FVITSSDDGTVKLWDLK 657
Score = 201 (75.8 bits), Expect = 2.0e-12, P = 2.0e-12
Identities = 48/169 (28%), Positives = 82/169 (48%)
Query: 484 LKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVE 543
LK+ V+ H + + + +V +GS D T VW + T GH G+WS +
Sbjct: 375 LKSPKVLKGHDDHVITCLQFCGNRIV-SGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQ 433
Query: 544 FSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVK 603
D ++I+ S D+T+K+W+ G C+ T GHTS+V R L ++VS D ++
Sbjct: 434 MR--DNIIISGSTDRTLKVWNAETGECIHTLYGHTSTV-RCMHLHE-KRVVSGSRDATLR 489
Query: 604 LWTVRTGECIATYDKHEDKIWALAV-GKKTEMFATGGSDALVNLWHDST 651
+W + TG+C+ H + + G++ +G D +V +W T
Sbjct: 490 VWDIETGQCLHVLMGHVAAVRCVQYDGRRV---VSGAYDFMVKVWDPET 535
Score = 198 (74.8 bits), Expect = 4.3e-12, P = 4.3e-12
Identities = 51/172 (29%), Positives = 81/172 (47%)
Query: 56 IEGGSD-TITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPSG 114
++G D IT L + + S ++VW T KCLR+ GH G +
Sbjct: 381 LKGHDDHVITCLQFCGNR--IVSGSDDNTLKVWSAVTGKCLRTLVGHTGGV--WSSQMRD 436
Query: 115 GLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWD 174
++ + DR + VW+ + G C H GH V + H +K ++ SGS DAT+RVWD
Sbjct: 437 NIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLH---EKRVV-SGSRDATLRVWD 492
Query: 175 LLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTV 226
+ +C+ L H + V + DG ++S D +V +WD +C T+
Sbjct: 493 IETGQCLHVLMGHVAAVR--CVQYDGRRVVSGAYDFMVKVWDPETETCLHTL 542
Score = 176 (67.0 bits), Expect = 8.2e-21, Sum P(2) = 8.2e-21
Identities = 40/147 (27%), Positives = 70/147 (47%)
Query: 505 NDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWS 564
++ V +GS+D T VW + + GH + V++ + V++ + D +K+W
Sbjct: 475 HEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYD--GRRVVSGAYDFMVKVWD 532
Query: 565 ISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIW 624
+CL T +GHT+ V F G +VS D +++W V TG CI T H+
Sbjct: 533 PETETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTS 590
Query: 625 ALAVGKKTEMFATGGSDALVNLWHDST 651
+ + K + +G +D+ V +W T
Sbjct: 591 GMEL--KDNILVSGNADSTVKIWDIKT 615
Score = 172 (65.6 bits), Expect = 2.9e-09, P = 2.9e-09
Identities = 43/139 (30%), Positives = 65/139 (46%)
Query: 514 QDRTACVWRLPDLVSVVTFRGHK-RGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLK 572
Q R WR +L S +GH I ++F +++ S D T+K+WS G CL+
Sbjct: 363 QHRIDTNWRRGELKSPKVLKGHDDHVITCLQFC--GNRIVSGSDDNTLKVWSAVTGKCLR 420
Query: 573 TFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKT 632
T GHT V + R I+S D +K+W TGECI T H + + + +K
Sbjct: 421 TLVGHTGGVWSSQM--RDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKR 478
Query: 633 EMFATGGSDALVNLWHDST 651
+ +G DA + +W T
Sbjct: 479 VV--SGSRDATLRVWDIET 495
Score = 170 (64.9 bits), Expect = 3.7e-20, Sum P(2) = 3.7e-20
Identities = 55/177 (31%), Positives = 82/177 (46%)
Query: 441 MGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSL 500
MG V AV + +VSG+ D +KVW D E L + H + SL
Sbjct: 503 MGHVAAVRCVQYDGRRVVSGAYDFMVKVW-------DPETETCLHT---LQGHTNRVYSL 552
Query: 501 AVAPNDSL-VCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKT 559
D + V +GS D + VW + + T GH+ +E D ++++ + D T
Sbjct: 553 QF---DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELK--DNILVSGNADST 607
Query: 560 IKIWSISDGSCLKTFEG---HTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECI 613
+KIW I G CL+T +G H S+V F +++ DG VKLW ++TGE I
Sbjct: 608 VKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNF--VITSSDDGTVKLWDLKTGEFI 662
Score = 160 (61.4 bits), Expect = 5.8e-08, P = 5.8e-08
Identities = 42/162 (25%), Positives = 74/162 (45%)
Query: 27 VSSDGSFIACACGE-SINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIR 85
V DG + + + + D + T++G ++ + +L D + S IR
Sbjct: 512 VQYDGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIR 569
Query: 86 VWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKG--- 142
VWD+ T C+ + GH GM + +L + AD V +WD+ G C +G
Sbjct: 570 VWDVETGNCIHTLTGHQSLTSGMELKDN--ILVSGNADSTVKIWDIKTGQCLQTLQGPNK 627
Query: 143 HKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATL 184
H+ V+ + F+ K+ + + SDD TV++WDL + + L
Sbjct: 628 HQSAVTCLQFN----KNFVITSSDDGTVKLWDLKTGEFIRNL 665
Score = 155 (59.6 bits), Expect = 9.0e-24, Sum P(2) = 9.0e-24
Identities = 45/151 (29%), Positives = 66/151 (43%)
Query: 76 FSSGHSREIRV---WDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVL-VWDV 131
+ S + R+ R+ W LK + KGHD I C G +G+D L VW
Sbjct: 356 WKSAYIRQHRIDTNWRRGELKSPKVLKGHDDHVI--TCLQFCGNRIVSGSDDNTLKVWSA 413
Query: 132 DGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRV 191
G C GH G V S + ++ SGS D T++VW+ +C+ TL H S V
Sbjct: 414 VTGKCLRTLVGHTGGVWSSQMRDN----IIISGSTDRTLKVWNAETGECIHTLYGHTSTV 469
Query: 192 TSMAITSDGSTLISAGRDKVVNLWDLRDYSC 222
M + ++S RD + +WD+ C
Sbjct: 470 RCMHLHE--KRVVSGSRDATLRVWDIETGQC 498
Score = 144 (55.7 bits), Expect = 2.2e-17, Sum P(2) = 2.2e-17
Identities = 44/171 (25%), Positives = 82/171 (47%)
Query: 405 CALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDH 464
C G+ +V+G+ D V++WD E+ C+ GH V ++ F +VSGS D
Sbjct: 511 CVQYDGR-RVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFDGI---HVVSGSLDT 566
Query: 465 TIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLP 524
+I+VW D E + + H + + S + D+++ +G+ D T +W +
Sbjct: 567 SIRVW-------DVETGNCIHT---LTGH-QSLTS-GMELKDNILVSGNADSTVKIWDIK 614
Query: 525 DLVSVVTFRG---HKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLK 572
+ T +G H+ + ++F+ VIT+S D T+K+W + G ++
Sbjct: 615 TGQCLQTLQGPNKHQSAVTCLQFNK--NFVITSSDDGTVKLWDLKTGEFIR 663
Score = 140 (54.3 bits), Expect = 8.5e-06, P = 8.5e-06
Identities = 71/313 (22%), Positives = 135/313 (43%)
Query: 167 DATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTV 226
D R +L + K + D H +T + G+ ++S D + +W C T
Sbjct: 367 DTNWRRGELKSPKVLKGHDDHV--ITCLQFC--GNRIVSGSDDNTLKVWSAVTGKCLRT- 421
Query: 227 PTYEMVEAVCAIPPGSAFDSFL-SSYNQQTIKK-KRRSLE-IHFITVGERGIVRMWNADS 283
+V + D+ + S +T+K + E IH + G VR +
Sbjct: 422 ----LVGHTGGVWSSQMRDNIIISGSTDRTLKVWNAETGECIHTL-YGHTSTVRCMHLHE 476
Query: 284 ACLYEQKSSDVTISFEMDDSKRGFTAATVLPSNQGLLCVTADQQLLL---YT-TVEVPEK 339
+ S D T+ + D + G ++ + CV D + ++ Y V+V +
Sbjct: 477 KRVVSG-SRDATL--RVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDP 533
Query: 340 KMELILSKRLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIV 399
+ E L L G+ + L+F G ++ T+I +V+D+ + +C + L GH +
Sbjct: 534 ETETCLHT-LQGHTNRVYSLQFDGIHVVSGSLDTSI---RVWDVETGNCIHTLTGHQSL- 588
Query: 400 LCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTG---HMGAVGAVAFSKKLQNF 456
T + ++V+G+ D++V++WD ++ C+ G H AV + F+K NF
Sbjct: 589 ----TSGMELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNK---NF 641
Query: 457 LVSGSSDHTIKVW 469
+++ S D T+K+W
Sbjct: 642 VITSSDDGTVKLW 654
>MGI|MGI:2429770 [details] [associations]
symbol:Nle1 "notchless homolog 1 (Drosophila)" species:10090
"Mus musculus" [GO:0001826 "inner cell mass cell differentiation"
evidence=IMP] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005634 "nucleus" evidence=IEA] [GO:0007219 "Notch signaling
pathway" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 MGI:MGI:2429770 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GeneTree:ENSGT00690000102167 PRINTS:PR00319
EMBL:AL603745 GO:GO:0001826 HOGENOM:HOG000091641 KO:K14855
OMA:HFTCKGH InterPro:IPR012972 Pfam:PF08154 CTD:54475
HOVERGEN:HBG007602 OrthoDB:EOG4BCDMS EMBL:BC018399 IPI:IPI00124677
RefSeq:NP_663406.2 UniGene:Mm.29176 ProteinModelPortal:Q8VEJ4
SMR:Q8VEJ4 STRING:Q8VEJ4 PhosphoSite:Q8VEJ4 PaxDb:Q8VEJ4
PRIDE:Q8VEJ4 Ensembl:ENSMUST00000103213 GeneID:217011
KEGG:mmu:217011 InParanoid:B1ARD5 NextBio:375506 Bgee:Q8VEJ4
CleanEx:MM_NLE1 Genevestigator:Q8VEJ4 GermOnline:ENSMUSG00000020692
Uniprot:Q8VEJ4
Length = 485
Score = 249 (92.7 bits), Expect = 4.7e-18, P = 4.7e-18
Identities = 75/311 (24%), Positives = 141/311 (45%)
Query: 343 LILSKRLVGYNEEILDLKF----LGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEI 398
L + + L G+++ I L + + E +Y+A ++ V+V+D ++ C +L GH++
Sbjct: 189 LQVGRTLTGHSKWITGLSWEPLHMNPECRYVASSSKDGSVRVWDTTAGRCERILTGHTQS 248
Query: 399 VLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLV 458
V CL G L+ + S+D ++++W + GH V +A S
Sbjct: 249 VTCLRW----GGDGLLYSASQDRTIKVWRAHDGVLCRTLQGHGHWVNTMALS-------- 296
Query: 459 SGSSDHTIKVWSFDGLSDDAE-QPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRT 517
+D+ ++ +F+ Q + K + N + + LV +GS D T
Sbjct: 297 ---TDYALRTGAFEPAEATVNAQDLQGSLKELKERASSRYNLVRGQGPERLV-SGSDDFT 352
Query: 518 ACVWR-LPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEG 576
+W D + GH+ I V FSP ++V +AS DK+IK+W G L + G
Sbjct: 353 LFLWSPAEDKKPLARMTGHQALINQVLFSPDSRIVASASFDKSIKLWDGRTGKYLASLRG 412
Query: 577 HTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFA 636
H ++V + ++ +VS +D +K+W V+ + H D+++A+ + A
Sbjct: 413 HVAAVYQIAWSADSRLLVSGSSDSTLKVWDVKAQKLATDLPGHADEVYAVDWSPDGQRVA 472
Query: 637 TGGSDALVNLW 647
+GG D + +W
Sbjct: 473 SGGKDKCLRIW 483
Score = 218 (81.8 bits), Expect = 1.1e-23, Sum P(2) = 1.1e-23
Identities = 66/222 (29%), Positives = 101/222 (45%)
Query: 13 EPVLQQFYGGGPLVVSSDGSFIACACGESINIVDL---SNASIK--------STIEGGSD 61
EP+ FY +VSS G + E+ IVD+ A + S++EG S+
Sbjct: 56 EPLPLAFYVHDAEIVSSLGKTLESQSVETEKIVDIIYQPQAVFRVRAVTRCTSSLEGHSE 115
Query: 62 TITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAG 121
+ ++A SP K L S +R WDLST + KGH + ++ P G LA+
Sbjct: 116 AVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHFTCKGHRHWVLSISWSPDGKKLASGC 175
Query: 122 ADRKVLVWDVDGGFCT-HYFKGHKGVVSSILFHP---DTDKSLLFSGSDDATVRVWDLLA 177
+ +VL+WD G GH ++ + + P + + + S S D +VRVWD A
Sbjct: 176 KNGQVLLWDPSTGLQVGRTLTGHSKWITGLSWEPLHMNPECRYVASSSKDGSVRVWDTTA 235
Query: 178 KKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRD 219
+C L H VT + DG L SA +D+ + +W D
Sbjct: 236 GRCERILTGHTQSVTCLRWGGDG-LLYSASQDRTIKVWRAHD 276
Score = 175 (66.7 bits), Expect = 7.1e-10, P = 7.1e-10
Identities = 48/176 (27%), Positives = 78/176 (44%)
Query: 41 SINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWD-LSTLKCLRSWK 99
++N DL S+K E S + ++L+ S + +W K L
Sbjct: 312 TVNAQDLQG-SLKELKERASSRYNLVRGQGPERLV-SGSDDFTLFLWSPAEDKKPLARMT 369
Query: 100 GHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKS 159
GH + P ++A+A D+ + +WD G +GH V I + D
Sbjct: 370 GHQALINQVLFSPDSRIVASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAW--SADSR 427
Query: 160 LLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLW 215
LL SGS D+T++VWD+ A+K L H V ++ + DG + S G+DK + +W
Sbjct: 428 LLVSGSSDSTLKVWDVKAQKLATDLPGHADEVYAVDWSPDGQRVASGGKDKCLRIW 483
Score = 153 (58.9 bits), Expect = 1.8e-07, P = 1.8e-07
Identities = 84/340 (24%), Positives = 145/340 (42%)
Query: 334 VEVPEKKMELILSKRLVGYNEEILDLKF----------LGEEEQYLAVATN-----IEQV 378
V++ K++L+ + L EE L L F LG+ + +V T I Q
Sbjct: 37 VDITPDKLQLVCNALLA--QEEPLPLAFYVHDAEIVSSLGKTLESQSVETEKIVDIIYQP 94
Query: 379 Q-VYDLSSMS-CSYVLAGHSEIVLCLDTCALS-SGKILIVTGSKDNSVRLWDSESRCCVG 435
Q V+ + +++ C+ L GHSE V+ + A S +GK L +GS D +VR WD +
Sbjct: 95 QAVFRVRAVTRCTSSLEGHSEAVISV---AFSPTGKYL-ASGSGDTTVRFWDLSTETPHF 150
Query: 436 VGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGK 495
GH V ++++S + L SG + + +W + L+ + H K
Sbjct: 151 TCKGHRHWVLSISWSPDGKK-LASGCKNGQVLLW---------DPSTGLQVGRTLTGHSK 200
Query: 496 DINSLA-----VAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQV 550
I L+ + P V + S+D + VW GH + + + + D +
Sbjct: 201 WITGLSWEPLHMNPECRYVASSSKDGSVRVWDTTAGRCERILTGHTQSVTCLRWGG-DGL 259
Query: 551 VITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTG 610
+ +AS D+TIK+W DG +T +GH V + T A + GA + TV
Sbjct: 260 LYSASQDRTIKVWRAHDGVLCRTLQGHGHWVNTMALSTDYA--LRTGAFEPAEA-TVNAQ 316
Query: 611 ECIATYDKHEDKI---WALAVGKKTEMFATGGSDALVNLW 647
+ + + +++ + L G+ E +G D + LW
Sbjct: 317 DLQGSLKELKERASSRYNLVRGQGPERLVSGSDDFTLFLW 356
Score = 141 (54.7 bits), Expect = 3.7e-06, P = 3.7e-06
Identities = 46/214 (21%), Positives = 89/214 (41%)
Query: 30 DGSFIACACGESINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWDL 89
DG + + +I + + + T++G + +ALS D L + E V
Sbjct: 257 DGLLYSASQDRTIKVWRAHDGVLCRTLQGHGHWVNTMALSTDYALRTGAFEPAEATVNAQ 316
Query: 90 STLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWD-VDGGFCTHYFKGHKGVVS 148
L+ K + L + D + +W + GH+ +++
Sbjct: 317 DLQGSLKELKERASSRYNLVRGQGPERLVSGSDDFTLFLWSPAEDKKPLARMTGHQALIN 376
Query: 149 SILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGR 208
+LF PD+ ++ S S D ++++WD K +A+L H + V +A ++D L+S
Sbjct: 377 QVLFSPDS--RIVASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSADSRLLVSGSS 434
Query: 209 DKVVNLWDLRDYSCKLTVPTY-EMVEAVCAIPPG 241
D + +WD++ +P + + V AV P G
Sbjct: 435 DSTLKVWDVKAQKLATDLPGHADEVYAVDWSPDG 468
Score = 138 (53.6 bits), Expect = 7.9e-06, P = 7.9e-06
Identities = 47/170 (27%), Positives = 78/170 (45%)
Query: 489 VVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVT-FRGHKRGIWSVEFSPV 547
+V++ GK + S +V + +V Q + V+R+ + + GH + SV FSP
Sbjct: 69 IVSSLGKTLESQSVE-TEKIVDIIYQPQA--VFRVRAVTRCTSSLEGHSEAVISVAFSPT 125
Query: 548 DQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTV 607
+ + + SGD T++ W +S + T +GH VL S+ G ++ S +G V LW
Sbjct: 126 GKYLASGSGDTTVRFWDLSTETPHFTCKGHRHWVLSISWSPDGKKLASGCKNGQVLLWDP 185
Query: 608 RTGECIA-TYDKHEDKI----WA-LAVGKKTEMFATGGSDALVNLWHDST 651
TG + T H I W L + + A+ D V +W D+T
Sbjct: 186 STGLQVGRTLTGHSKWITGLSWEPLHMNPECRYVASSSKDGSVRVW-DTT 234
Score = 132 (51.5 bits), Expect = 1.1e-23, Sum P(2) = 1.1e-23
Identities = 36/131 (27%), Positives = 62/131 (47%)
Query: 392 LAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSK 451
+ GH ++ + S ++ + S D S++LWD + + GH+ AV +A+S
Sbjct: 368 MTGHQALI---NQVLFSPDSRIVASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSA 424
Query: 452 KLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCT 511
LVSGSSD T+KVW D Q K + H ++ ++ +P+ V +
Sbjct: 425 D-SRLLVSGSSDSTLKVW------DVKAQ----KLATDLPGHADEVYAVDWSPDGQRVAS 473
Query: 512 GSQDRTACVWR 522
G +D+ +WR
Sbjct: 474 GGKDKCLRIWR 484
>UNIPROTKB|F1NUJ8 [details] [associations]
symbol:POC1A "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005814 "centriole" evidence=IEA] [GO:0005932
"microtubule basal body" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 OMA:ANHVEFH EMBL:AADN02052960
EMBL:AADN02052961 EMBL:AADN02052962 EMBL:AADN02052963
IPI:IPI00603564 Ensembl:ENSGALT00000002196 Uniprot:F1NUJ8
Length = 320
Score = 281 (104.0 bits), Expect = 1.1e-23, P = 1.1e-23
Identities = 79/303 (26%), Positives = 137/303 (45%)
Query: 345 LSKRLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDT 404
L + G+ + I + F ++Q LA + ++++ + +Y L GH + V+C+
Sbjct: 12 LERHFRGHRDAITSVDFSLNKKQ-LASGSMDSCLKIWSMKPQMRAYCLVGHKDAVMCVQF 70
Query: 405 CALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDH 464
SG L+ +GS+D +V LW + V H V +V FS Q+ LV+ S D
Sbjct: 71 SP--SGH-LVASGSRDKTVCLWVPSVKGESTVFKAHTATVRSVHFSSDGQS-LVTASDDK 126
Query: 465 TIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLP 524
TIKVW+ K ++ H + +P+ L+ + S D+T +W
Sbjct: 127 TIKVWTVH----------RQKFLFSLSQHINWVRCARFSPDGRLIASASDDKTVKLWDKT 176
Query: 525 DLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRA 584
+ +F H VEF P + A DKT+K+W + L+ ++ HT++V
Sbjct: 177 SRECIHSFCEHGGFANHVEFHPSGTCIAAAGTDKTVKVWDVRMNRLLQHYQVHTAAVNSL 236
Query: 585 SFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALV 644
SF G +++ D +K+ + G + T H+ +A + + FA+GGSD V
Sbjct: 237 SFHPSGNYLITASNDSTLKILDLLEGRLLYTLHGHQGPATCVAFSRTGDFFASGGSDEQV 296
Query: 645 NLW 647
+W
Sbjct: 297 MVW 299
Score = 251 (93.4 bits), Expect = 2.0e-20, P = 2.0e-20
Identities = 55/189 (29%), Positives = 98/189 (51%)
Query: 28 SSDG-SFIACACGESINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRV 86
SSDG S + + ++I + + ++ + + SPD +L+ S+ + +++
Sbjct: 113 SSDGQSLVTASDDKTIKVWTVHRQKFLFSLSQHINWVRCARFSPDGRLIASASDDKTVKL 172
Query: 87 WDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGV 146
WD ++ +C+ S+ H G A + HPSG +A AG D+ V VWDV +++ H
Sbjct: 173 WDKTSRECIHSFCEHGGFANHVEFHPSGTCIAAAGTDKTVKVWDVRMNRLLQHYQVHTAA 232
Query: 147 VSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISA 206
V+S+ FHP + L + S+D+T+++ DLL + + TL H T +A + G S
Sbjct: 233 VNSLSFHPSGN--YLITASNDSTLKILDLLEGRLLYTLHGHQGPATCVAFSRTGDFFASG 290
Query: 207 GRDKVVNLW 215
G D+ V +W
Sbjct: 291 GSDEQVMVW 299
Score = 201 (75.8 bits), Expect = 2.2e-13, P = 2.2e-13
Identities = 51/174 (29%), Positives = 80/174 (45%)
Query: 51 SIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMAC 110
S++ G D IT++ S + K L S +++W + GH + +
Sbjct: 11 SLERHFRGHRDAITSVDFSLNKKQLASGSMDSCLKIWSMKPQMRAYCLVGHKDAVMCVQF 70
Query: 111 HPSGGLLATAGADRKVLVW--DVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDA 168
PSG L+A+ D+ V +W V G + FK H V S+ H +D L + SDD
Sbjct: 71 SPSGHLVASGSRDKTVCLWVPSVKGE--STVFKAHTATVRSV--HFSSDGQSLVTASDDK 126
Query: 169 TVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSC 222
T++VW + +K + +L +H + V + DG + SA DK V LWD C
Sbjct: 127 TIKVWTVHRQKFLFSLSQHINWVRCARFSPDGRLIASASDDKTVKLWDKTSREC 180
Score = 191 (72.3 bits), Expect = 3.4e-12, P = 3.4e-12
Identities = 52/184 (28%), Positives = 85/184 (46%)
Query: 37 ACGESINIVDLSNASIK--STI-EGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLK 93
A G V L S+K ST+ + + T+ ++ S D + L ++ + I+VW + K
Sbjct: 78 ASGSRDKTVCLWVPSVKGESTVFKAHTATVRSVHFSSDGQSLVTASDDKTIKVWTVHRQK 137
Query: 94 CLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFH 153
L S H P G L+A+A D+ V +WD C H F H G + + FH
Sbjct: 138 FLFSLSQHINWVRCARFSPDGRLIASASDDKTVKLWDKTSRECIHSFCEHGGFANHVEFH 197
Query: 154 PDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVN 213
P + + + D TV+VWD+ + + H + V S++ G+ LI+A D +
Sbjct: 198 PSG--TCIAAAGTDKTVKVWDVRMNRLLQHYQVHTAAVNSLSFHPSGNYLITASNDSTLK 255
Query: 214 LWDL 217
+ DL
Sbjct: 256 ILDL 259
Score = 174 (66.3 bits), Expect = 3.1e-10, P = 3.1e-10
Identities = 43/161 (26%), Positives = 68/161 (42%)
Query: 58 GGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPSGGLL 117
G D + + SP L+ S + + +W S +K H + G L
Sbjct: 60 GHKDAVMCVQFSPSGHLVASGSRDKTVCLWVPSVKGESTVFKAHTATVRSVHFSSDGQSL 119
Query: 118 ATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLA 177
TA D+ + VW V H V F PD L+ S SDD TV++WD +
Sbjct: 120 VTASDDKTIKVWTVHRQKFLFSLSQHINWVRCARFSPDG--RLIASASDDKTVKLWDKTS 177
Query: 178 KKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLR 218
++C+ + +H + G+ + +AG DK V +WD+R
Sbjct: 178 RECIHSFCEHGGFANHVEFHPSGTCIAAAGTDKTVKVWDVR 218
>WB|WBGene00004767 [details] [associations]
symbol:sel-10 species:6239 "Caenorhabditis elegans"
[GO:0008593 "regulation of Notch signaling pathway" evidence=IGI]
[GO:0030424 "axon" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00646
PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256
SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0046660
GO:GO:0045746 GeneTree:ENSGT00690000101849 KO:K10260 OMA:EECLHTL
HOGENOM:HOG000236264 EMBL:Z79757 EMBL:AF020788 PIR:T22703
RefSeq:NP_001023975.1 RefSeq:NP_506421.1 UniGene:Cel.2743
ProteinModelPortal:Q93794 SMR:Q93794 IntAct:Q93794 MINT:MINT-115740
STRING:Q93794 PRIDE:Q93794 EnsemblMetazoa:F55B12.3a GeneID:179878
KEGG:cel:CELE_F55B12.3 UCSC:F55B12.3b.1 CTD:179878
WormBase:F55B12.3a WormBase:F55B12.3b InParanoid:Q93794
NextBio:907238 Uniprot:Q93794
Length = 587
Score = 256 (95.2 bits), Expect = 5.5e-18, Sum P(2) = 5.5e-18
Identities = 81/293 (27%), Positives = 138/293 (47%)
Query: 364 EEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSV 423
++ +YL A IE+ ++ + + S VL GH + V+ TC +L VTGS DN++
Sbjct: 226 DKSRYLR-ADKIEKN--WNANPIMGSAVLRGHEDHVI---TCMQIHDDVL-VTGSDDNTL 278
Query: 424 RLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMN 483
++W + + GH G V S+ ++VSGS+D T+KVWS + D
Sbjct: 279 KVWCIDKGEVMYTLVGHTGGVWTSQISQ-CGRYIVSGSTDRTVKVWS----TVDGSLLHT 333
Query: 484 LKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVE 543
L+ H + +A+A S++ TGS+D T VW + + T GH + V+
Sbjct: 334 LQG------HTSTVRCMAMA--GSILVTGSRDTTLRVWDVESGRHLATLHGHHAAVRCVQ 385
Query: 544 FSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVK 603
F V++ D T+KIW+ G C++T GH + V F + + + S D ++
Sbjct: 386 FDGT--TVVSGGYDFTVKIWNAHTGRCIRTLTGHNNRVYSLLFESERSIVCSGSLDTSIR 443
Query: 604 LW--TVRTG-ECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLW--HDST 651
+W T G EC+A H + + + + + +D+ V +W H+ T
Sbjct: 444 VWDFTRPEGQECVALLQGHTSLTSGMQL--RGNILVSCNADSHVRVWDIHEGT 494
Score = 248 (92.4 bits), Expect = 1.2e-23, Sum P(2) = 1.2e-23
Identities = 69/238 (28%), Positives = 107/238 (44%)
Query: 414 IVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDG 473
IV+GS D +V++W + + GH V +A + + LV+GS D T++VW
Sbjct: 311 IVSGSTDRTVKVWSTVDGSLLHTLQGHTSTVRCMAMAGSI---LVTGSRDTTLRVW---- 363
Query: 474 LSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFR 533
D E +L HG V + + V +G D T +W + T
Sbjct: 364 ---DVESGRHL-----ATLHGHHAAVRCVQFDGTTVVSGGYDFTVKIWNAHTGRCIRTLT 415
Query: 534 GHKRGIWSVEFSPVDQVVITASGDKTIKIWSIS--DGS-CLKTFEGHTSSVLRASFLTRG 590
GH ++S+ F +V + S D +I++W + +G C+ +GHTS L + RG
Sbjct: 416 GHNNRVYSLLFESERSIVCSGSLDTSIRVWDFTRPEGQECVALLQGHTS--LTSGMQLRG 473
Query: 591 AQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALA-VGKKTEMFATGGSDALVNLW 647
+VSC AD V++W + G C+ H I +L G+ M AT D V LW
Sbjct: 474 NILVSCNADSHVRVWDIHEGTCVHMLSGHRSAITSLQWFGRN--MVATSSDDGTVKLW 529
Score = 247 (92.0 bits), Expect = 1.5e-23, Sum P(2) = 1.5e-23
Identities = 69/250 (27%), Positives = 116/250 (46%)
Query: 367 QYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLW 426
+Y+ + V+V+ S + L GH+ V C+ A++ G IL VTGS+D ++R+W
Sbjct: 309 RYIVSGSTDRTVKVWSTVDGSLLHTLQGHTSTVRCM---AMA-GSIL-VTGSRDTTLRVW 363
Query: 427 DSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKA 486
D ES + GH AV V F +VSG D T+K+W+ A ++
Sbjct: 364 DVESGRHLATLHGHHAAVRCVQFDGTT---VVSGGYDFTVKIWN-------AHTGRCIRT 413
Query: 487 KAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRL--PD-LVSVVTFRGHKRGIWSVE 543
+ H + SL S+VC+GS D + VW P+ V +GH ++
Sbjct: 414 ---LTGHNNRVYSLLFESERSIVCSGSLDTSIRVWDFTRPEGQECVALLQGHTSLTSGMQ 470
Query: 544 FSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVK 603
++++ + D +++W I +G+C+ GH S++ + R + + DG VK
Sbjct: 471 LR--GNILVSCNADSHVRVWDIHEGTCVHMLSGHRSAITSLQWFGRN-MVATSSDDGTVK 527
Query: 604 LWTVRTGECI 613
LW + G I
Sbjct: 528 LWDIERGALI 537
Score = 224 (83.9 bits), Expect = 4.5e-15, P = 4.5e-15
Identities = 54/201 (26%), Positives = 100/201 (49%)
Query: 27 VSSDGSFIACACGE-SINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIR 85
+S G +I + ++ + + S+ T++G + T+ +A++ +L + +R
Sbjct: 304 ISQCGRYIVSGSTDRTVKVWSTVDGSLLHTLQGHTSTVRCMAMA--GSILVTGSRDTTLR 361
Query: 86 VWDLSTLKCLRSWKGHDGPAIGMACHP-SGGLLATAGADRKVLVWDVDGGFCTHYFKGHK 144
VWD+ + + L + GH + C G + + G D V +W+ G C GH
Sbjct: 362 VWDVESGRHLATLHGHHA---AVRCVQFDGTTVVSGGYDFTVKIWNAHTGRCIRTLTGHN 418
Query: 145 GVVSSILFHPDTDKSLLFSGSDDATVRVWDLL---AKKCVATLDKHFSRVTSMAITSDGS 201
V S+LF ++++S++ SGS D ++RVWD ++CVA L H S + M + G+
Sbjct: 419 NRVYSLLF--ESERSIVCSGSLDTSIRVWDFTRPEGQECVALLQGHTSLTSGMQLR--GN 474
Query: 202 TLISAGRDKVVNLWDLRDYSC 222
L+S D V +WD+ + +C
Sbjct: 475 ILVSCNADSHVRVWDIHEGTC 495
Score = 186 (70.5 bits), Expect = 6.3e-11, P = 6.3e-11
Identities = 45/170 (26%), Positives = 75/170 (44%)
Query: 47 LSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAI 106
+ + T+ G + + +S + + S R ++VW L + +GH
Sbjct: 283 IDKGEVMYTLVGHTGGVWTSQISQCGRYIVSGSTDRTVKVWSTVDGSLLHTLQGHTSTVR 342
Query: 107 GMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSD 166
MA +G +L T D + VWDV+ G GH V + F D + + SG
Sbjct: 343 CMAM--AGSILVTGSRDTTLRVWDVESGRHLATLHGHHAAVRCVQF----DGTTVVSGGY 396
Query: 167 DATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWD 216
D TV++W+ +C+ TL H +RV S+ S+ S + S D + +WD
Sbjct: 397 DFTVKIWNAHTGRCIRTLTGHNNRVYSLLFESERSIVCSGSLDTSIRVWD 446
Score = 179 (68.1 bits), Expect = 3.7e-10, P = 3.7e-10
Identities = 47/174 (27%), Positives = 78/174 (44%)
Query: 54 STIEGGSD-TITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHP 112
+ + G D IT + + D +L + ++VW + + + + GH G
Sbjct: 249 AVLRGHEDHVITCMQIHDD--VLVTGSDDNTLKVWCIDKGEVMYTLVGHTGGVWTSQISQ 306
Query: 113 SGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRV 172
G + + DR V VW G H +GH V + S+L +GS D T+RV
Sbjct: 307 CGRYIVSGSTDRTVKVWSTVDGSLLHTLQGHTSTVRCMAMAG----SILVTGSRDTTLRV 362
Query: 173 WDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTV 226
WD+ + + +ATL H + V + DG+T++S G D V +W+ C T+
Sbjct: 363 WDVESGRHLATLHGHHAAVR--CVQFDGTTVVSGGYDFTVKIWNAHTGRCIRTL 414
Score = 172 (65.6 bits), Expect = 2.1e-09, P = 2.1e-09
Identities = 44/192 (22%), Positives = 85/192 (44%)
Query: 31 GSFIACACGES-INIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWDL 89
GS + ++ + + D+ + +T+ G + + D + S G+ +++W+
Sbjct: 348 GSILVTGSRDTTLRVWDVESGRHLATLHGHHAAVRCVQF--DGTTVVSGGYDFTVKIWNA 405
Query: 90 STLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDV---DGGFCTHYFKGHKGV 146
T +C+R+ GH+ + ++ + D + VWD +G C +GH +
Sbjct: 406 HTGRCIRTLTGHNNRVYSLLFESERSIVCSGSLDTSIRVWDFTRPEGQECVALLQGHTSL 465
Query: 147 VSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISA 206
S + + +L S + D+ VRVWD+ CV L H S +TS+ G +++
Sbjct: 466 TSGMQLRGN----ILVSCNADSHVRVWDIHEGTCVHMLSGHRSAITSLQWF--GRNMVAT 519
Query: 207 GRDK-VVNLWDL 217
D V LWD+
Sbjct: 520 SSDDGTVKLWDI 531
Score = 171 (65.3 bits), Expect = 4.1e-15, Sum P(2) = 4.1e-15
Identities = 49/195 (25%), Positives = 93/195 (47%)
Query: 378 VQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVG 437
++V+D+ S L GH V C+ + +V+G D +V++W++ + C+
Sbjct: 360 LRVWDVESGRHLATLHGHHAAVRCVQFDGTT-----VVSGGYDFTVKIWNAHTGRCIRTL 414
Query: 438 TGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDI 497
TGH V ++ F + ++ + SGS D +I+VW F +P + A++ H
Sbjct: 415 TGHNNRVYSLLFESE-RSIVCSGSLDTSIRVWDFT-------RPEGQECVALLQGHTSLT 466
Query: 498 NSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGD 557
+ + + N + C D VW + + V GH+ I S+++ + V T+S D
Sbjct: 467 SGMQLRGNILVSCNA--DSHVRVWDIHEGTCVHMLSGHRSAITSLQWFGRNMVA-TSSDD 523
Query: 558 KTIKIWSISDGSCLK 572
T+K+W I G+ ++
Sbjct: 524 GTVKLWDIERGALIR 538
Score = 103 (41.3 bits), Expect = 1.2e-23, Sum P(2) = 1.2e-23
Identities = 28/101 (27%), Positives = 50/101 (49%)
Query: 122 ADRKVLVWDVDGGFCTHYFKGHKG-VVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKC 180
AD+ W+ + + +GH+ V++ + H D +L +GSDD T++VW + +
Sbjct: 233 ADKIEKNWNANPIMGSAVLRGHEDHVITCMQIHDD----VLVTGSDDNTLKVWCIDKGEV 288
Query: 181 VATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYS 221
+ TL H V + I+ G ++S D+ V +W D S
Sbjct: 289 MYTLVGHTGGVWTSQISQCGRYIVSGSTDRTVKVWSTVDGS 329
Score = 40 (19.1 bits), Expect = 5.5e-18, Sum P(2) = 5.5e-18
Identities = 9/25 (36%), Positives = 12/25 (48%)
Query: 243 AFDSFLSSYNQQTIKKKRRSLEIHF 267
AF L N I++ R +E HF
Sbjct: 95 AFTRLLQESNMTNIRQLRAIIEPHF 119
>UNIPROTKB|Q93794 [details] [associations]
symbol:sel-10 "F-box/WD repeat-containing protein sel-10"
species:6239 "Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] [GO:0030424 "axon" evidence=IDA] [GO:0046660 "female
sex differentiation" evidence=IMP] [GO:0045746 "negative regulation
of Notch signaling pathway" evidence=IGI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
Pfam:PF00400 Pfam:PF00646 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030424 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0046660 GO:GO:0045746
GeneTree:ENSGT00690000101849 KO:K10260 OMA:EECLHTL
HOGENOM:HOG000236264 EMBL:Z79757 EMBL:AF020788 PIR:T22703
RefSeq:NP_001023975.1 RefSeq:NP_506421.1 UniGene:Cel.2743
ProteinModelPortal:Q93794 SMR:Q93794 IntAct:Q93794 MINT:MINT-115740
STRING:Q93794 PRIDE:Q93794 EnsemblMetazoa:F55B12.3a GeneID:179878
KEGG:cel:CELE_F55B12.3 UCSC:F55B12.3b.1 CTD:179878
WormBase:F55B12.3a WormBase:F55B12.3b InParanoid:Q93794
NextBio:907238 Uniprot:Q93794
Length = 587
Score = 256 (95.2 bits), Expect = 5.5e-18, Sum P(2) = 5.5e-18
Identities = 81/293 (27%), Positives = 138/293 (47%)
Query: 364 EEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSV 423
++ +YL A IE+ ++ + + S VL GH + V+ TC +L VTGS DN++
Sbjct: 226 DKSRYLR-ADKIEKN--WNANPIMGSAVLRGHEDHVI---TCMQIHDDVL-VTGSDDNTL 278
Query: 424 RLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMN 483
++W + + GH G V S+ ++VSGS+D T+KVWS + D
Sbjct: 279 KVWCIDKGEVMYTLVGHTGGVWTSQISQ-CGRYIVSGSTDRTVKVWS----TVDGSLLHT 333
Query: 484 LKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVE 543
L+ H + +A+A S++ TGS+D T VW + + T GH + V+
Sbjct: 334 LQG------HTSTVRCMAMA--GSILVTGSRDTTLRVWDVESGRHLATLHGHHAAVRCVQ 385
Query: 544 FSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVK 603
F V++ D T+KIW+ G C++T GH + V F + + + S D ++
Sbjct: 386 FDGT--TVVSGGYDFTVKIWNAHTGRCIRTLTGHNNRVYSLLFESERSIVCSGSLDTSIR 443
Query: 604 LW--TVRTG-ECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLW--HDST 651
+W T G EC+A H + + + + + +D+ V +W H+ T
Sbjct: 444 VWDFTRPEGQECVALLQGHTSLTSGMQL--RGNILVSCNADSHVRVWDIHEGT 494
Score = 248 (92.4 bits), Expect = 1.2e-23, Sum P(2) = 1.2e-23
Identities = 69/238 (28%), Positives = 107/238 (44%)
Query: 414 IVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDG 473
IV+GS D +V++W + + GH V +A + + LV+GS D T++VW
Sbjct: 311 IVSGSTDRTVKVWSTVDGSLLHTLQGHTSTVRCMAMAGSI---LVTGSRDTTLRVW---- 363
Query: 474 LSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFR 533
D E +L HG V + + V +G D T +W + T
Sbjct: 364 ---DVESGRHL-----ATLHGHHAAVRCVQFDGTTVVSGGYDFTVKIWNAHTGRCIRTLT 415
Query: 534 GHKRGIWSVEFSPVDQVVITASGDKTIKIWSIS--DGS-CLKTFEGHTSSVLRASFLTRG 590
GH ++S+ F +V + S D +I++W + +G C+ +GHTS L + RG
Sbjct: 416 GHNNRVYSLLFESERSIVCSGSLDTSIRVWDFTRPEGQECVALLQGHTS--LTSGMQLRG 473
Query: 591 AQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALA-VGKKTEMFATGGSDALVNLW 647
+VSC AD V++W + G C+ H I +L G+ M AT D V LW
Sbjct: 474 NILVSCNADSHVRVWDIHEGTCVHMLSGHRSAITSLQWFGRN--MVATSSDDGTVKLW 529
Score = 247 (92.0 bits), Expect = 1.5e-23, Sum P(2) = 1.5e-23
Identities = 69/250 (27%), Positives = 116/250 (46%)
Query: 367 QYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLW 426
+Y+ + V+V+ S + L GH+ V C+ A++ G IL VTGS+D ++R+W
Sbjct: 309 RYIVSGSTDRTVKVWSTVDGSLLHTLQGHTSTVRCM---AMA-GSIL-VTGSRDTTLRVW 363
Query: 427 DSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKA 486
D ES + GH AV V F +VSG D T+K+W+ A ++
Sbjct: 364 DVESGRHLATLHGHHAAVRCVQFDGTT---VVSGGYDFTVKIWN-------AHTGRCIRT 413
Query: 487 KAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRL--PD-LVSVVTFRGHKRGIWSVE 543
+ H + SL S+VC+GS D + VW P+ V +GH ++
Sbjct: 414 ---LTGHNNRVYSLLFESERSIVCSGSLDTSIRVWDFTRPEGQECVALLQGHTSLTSGMQ 470
Query: 544 FSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVK 603
++++ + D +++W I +G+C+ GH S++ + R + + DG VK
Sbjct: 471 LR--GNILVSCNADSHVRVWDIHEGTCVHMLSGHRSAITSLQWFGRN-MVATSSDDGTVK 527
Query: 604 LWTVRTGECI 613
LW + G I
Sbjct: 528 LWDIERGALI 537
Score = 224 (83.9 bits), Expect = 4.5e-15, P = 4.5e-15
Identities = 54/201 (26%), Positives = 100/201 (49%)
Query: 27 VSSDGSFIACACGE-SINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIR 85
+S G +I + ++ + + S+ T++G + T+ +A++ +L + +R
Sbjct: 304 ISQCGRYIVSGSTDRTVKVWSTVDGSLLHTLQGHTSTVRCMAMA--GSILVTGSRDTTLR 361
Query: 86 VWDLSTLKCLRSWKGHDGPAIGMACHP-SGGLLATAGADRKVLVWDVDGGFCTHYFKGHK 144
VWD+ + + L + GH + C G + + G D V +W+ G C GH
Sbjct: 362 VWDVESGRHLATLHGHHA---AVRCVQFDGTTVVSGGYDFTVKIWNAHTGRCIRTLTGHN 418
Query: 145 GVVSSILFHPDTDKSLLFSGSDDATVRVWDLL---AKKCVATLDKHFSRVTSMAITSDGS 201
V S+LF ++++S++ SGS D ++RVWD ++CVA L H S + M + G+
Sbjct: 419 NRVYSLLF--ESERSIVCSGSLDTSIRVWDFTRPEGQECVALLQGHTSLTSGMQLR--GN 474
Query: 202 TLISAGRDKVVNLWDLRDYSC 222
L+S D V +WD+ + +C
Sbjct: 475 ILVSCNADSHVRVWDIHEGTC 495
Score = 186 (70.5 bits), Expect = 6.3e-11, P = 6.3e-11
Identities = 45/170 (26%), Positives = 75/170 (44%)
Query: 47 LSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAI 106
+ + T+ G + + +S + + S R ++VW L + +GH
Sbjct: 283 IDKGEVMYTLVGHTGGVWTSQISQCGRYIVSGSTDRTVKVWSTVDGSLLHTLQGHTSTVR 342
Query: 107 GMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSD 166
MA +G +L T D + VWDV+ G GH V + F D + + SG
Sbjct: 343 CMAM--AGSILVTGSRDTTLRVWDVESGRHLATLHGHHAAVRCVQF----DGTTVVSGGY 396
Query: 167 DATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWD 216
D TV++W+ +C+ TL H +RV S+ S+ S + S D + +WD
Sbjct: 397 DFTVKIWNAHTGRCIRTLTGHNNRVYSLLFESERSIVCSGSLDTSIRVWD 446
Score = 179 (68.1 bits), Expect = 3.7e-10, P = 3.7e-10
Identities = 47/174 (27%), Positives = 78/174 (44%)
Query: 54 STIEGGSD-TITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHP 112
+ + G D IT + + D +L + ++VW + + + + GH G
Sbjct: 249 AVLRGHEDHVITCMQIHDD--VLVTGSDDNTLKVWCIDKGEVMYTLVGHTGGVWTSQISQ 306
Query: 113 SGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRV 172
G + + DR V VW G H +GH V + S+L +GS D T+RV
Sbjct: 307 CGRYIVSGSTDRTVKVWSTVDGSLLHTLQGHTSTVRCMAMAG----SILVTGSRDTTLRV 362
Query: 173 WDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTV 226
WD+ + + +ATL H + V + DG+T++S G D V +W+ C T+
Sbjct: 363 WDVESGRHLATLHGHHAAVR--CVQFDGTTVVSGGYDFTVKIWNAHTGRCIRTL 414
Score = 172 (65.6 bits), Expect = 2.1e-09, P = 2.1e-09
Identities = 44/192 (22%), Positives = 85/192 (44%)
Query: 31 GSFIACACGES-INIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWDL 89
GS + ++ + + D+ + +T+ G + + D + S G+ +++W+
Sbjct: 348 GSILVTGSRDTTLRVWDVESGRHLATLHGHHAAVRCVQF--DGTTVVSGGYDFTVKIWNA 405
Query: 90 STLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDV---DGGFCTHYFKGHKGV 146
T +C+R+ GH+ + ++ + D + VWD +G C +GH +
Sbjct: 406 HTGRCIRTLTGHNNRVYSLLFESERSIVCSGSLDTSIRVWDFTRPEGQECVALLQGHTSL 465
Query: 147 VSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISA 206
S + + +L S + D+ VRVWD+ CV L H S +TS+ G +++
Sbjct: 466 TSGMQLRGN----ILVSCNADSHVRVWDIHEGTCVHMLSGHRSAITSLQWF--GRNMVAT 519
Query: 207 GRDK-VVNLWDL 217
D V LWD+
Sbjct: 520 SSDDGTVKLWDI 531
Score = 171 (65.3 bits), Expect = 4.1e-15, Sum P(2) = 4.1e-15
Identities = 49/195 (25%), Positives = 93/195 (47%)
Query: 378 VQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVG 437
++V+D+ S L GH V C+ + +V+G D +V++W++ + C+
Sbjct: 360 LRVWDVESGRHLATLHGHHAAVRCVQFDGTT-----VVSGGYDFTVKIWNAHTGRCIRTL 414
Query: 438 TGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDI 497
TGH V ++ F + ++ + SGS D +I+VW F +P + A++ H
Sbjct: 415 TGHNNRVYSLLFESE-RSIVCSGSLDTSIRVWDFT-------RPEGQECVALLQGHTSLT 466
Query: 498 NSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGD 557
+ + + N + C D VW + + V GH+ I S+++ + V T+S D
Sbjct: 467 SGMQLRGNILVSCNA--DSHVRVWDIHEGTCVHMLSGHRSAITSLQWFGRNMVA-TSSDD 523
Query: 558 KTIKIWSISDGSCLK 572
T+K+W I G+ ++
Sbjct: 524 GTVKLWDIERGALIR 538
Score = 103 (41.3 bits), Expect = 1.2e-23, Sum P(2) = 1.2e-23
Identities = 28/101 (27%), Positives = 50/101 (49%)
Query: 122 ADRKVLVWDVDGGFCTHYFKGHKG-VVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKC 180
AD+ W+ + + +GH+ V++ + H D +L +GSDD T++VW + +
Sbjct: 233 ADKIEKNWNANPIMGSAVLRGHEDHVITCMQIHDD----VLVTGSDDNTLKVWCIDKGEV 288
Query: 181 VATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYS 221
+ TL H V + I+ G ++S D+ V +W D S
Sbjct: 289 MYTLVGHTGGVWTSQISQCGRYIVSGSTDRTVKVWSTVDGS 329
Score = 40 (19.1 bits), Expect = 5.5e-18, Sum P(2) = 5.5e-18
Identities = 9/25 (36%), Positives = 12/25 (48%)
Query: 243 AFDSFLSSYNQQTIKKKRRSLEIHF 267
AF L N I++ R +E HF
Sbjct: 95 AFTRLLQESNMTNIRQLRAIIEPHF 119
>ZFIN|ZDB-GENE-090313-79 [details] [associations]
symbol:fbxw7 "F-box and WD repeat domain containing
7" species:7955 "Danio rerio" [GO:0045746 "negative regulation of
Notch signaling pathway" evidence=IMP] [GO:0001525 "angiogenesis"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
ZFIN:ZDB-GENE-090313-79 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0001525 SUPFAM:SSF81383 GO:GO:0045746
GeneTree:ENSGT00690000101849 EMBL:AL953881 IPI:IPI00499035
Ensembl:ENSDART00000086512 Bgee:F1RCB5 Uniprot:F1RCB5
Length = 760
Score = 255 (94.8 bits), Expect = 3.0e-18, P = 3.0e-18
Identities = 67/231 (29%), Positives = 112/231 (48%)
Query: 391 VLAGHSE-IVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAF 449
VL GH + ++ CL C G IV+GS DN++++W + + C+ GH G V +
Sbjct: 428 VLKGHDDHVITCLQFC----GN-RIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWS--- 479
Query: 450 SKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLV 509
S+ N ++SGS+D T+KVW+ AE + + +G + ++ V
Sbjct: 480 SQMRDNIIISGSTDRTLKVWN-------AET-----GECIHTLYGHTSTVRCMHLHEKRV 527
Query: 510 CTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGS 569
+GS+D T VW + + GH + V++ + V++ + D +K+W +
Sbjct: 528 VSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYD--GRRVVSGAYDFMVKVWDPETET 585
Query: 570 CLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHE 620
CL T +GHT+ V F G +VS D +++W V TG CI T H+
Sbjct: 586 CLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQ 634
Score = 216 (81.1 bits), Expect = 5.3e-14, P = 5.3e-14
Identities = 62/230 (26%), Positives = 102/230 (44%)
Query: 30 DGSFIACACGESINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWDL 89
D I+ + ++ + + T+ G + T+ + L +K + S +RVWD+
Sbjct: 484 DNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLH--EKRVVSGSRDATLRVWDI 541
Query: 90 STLKCLRSWKGHDGPAIGMACHPSGGLLATAGA-DRKVLVWDVDGGFCTHYFKGHKGVVS 148
T +CL GH + C G +GA D V VWD + C H +GH V
Sbjct: 542 ETGQCLHVLMGH---VAAVRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVY 598
Query: 149 SILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGR 208
S+ F D + SGS D ++RVWD+ C+ TL H S + M + + L+S
Sbjct: 599 SLQF----DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDN--ILVSGNA 652
Query: 209 DKVVNLWDLRDYSCKLTVP-TYEMVEAVCAIPPGSAFDSFLSSYNQQTIK 257
D V +WD++ C T+ ++ AV + F ++S + T+K
Sbjct: 653 DSTVKIWDIKTGQCLQTLQGPHKHQSAVTCLQFNKNF--VITSSDDGTVK 700
Score = 204 (76.9 bits), Expect = 1.1e-12, P = 1.1e-12
Identities = 47/152 (30%), Positives = 78/152 (51%)
Query: 71 DDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGA-DRKVLVW 129
D + + S + ++VWD T CL + +GH + G+ +G+ D + VW
Sbjct: 563 DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFD---GIHVVSGSLDTSIRVW 619
Query: 130 DVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLD---K 186
DV+ G C H GH+ + S + + ++L SG+ D+TV++WD+ +C+ TL K
Sbjct: 620 DVETGNCIHTLTGHQSLTSGM----ELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPHK 675
Query: 187 HFSRVTSMAITSDGSTLISAGRDKVVNLWDLR 218
H S VT + + +I++ D V LWDLR
Sbjct: 676 HQSAVTCLQFNKN--FVITSSDDGTVKLWDLR 705
Score = 202 (76.2 bits), Expect = 1.4e-23, Sum P(2) = 1.4e-23
Identities = 56/194 (28%), Positives = 89/194 (45%)
Query: 457 LVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDR 516
+VSGS D T++VW D E L V+ H + V + V +G+ D
Sbjct: 527 VVSGSRDATLRVW-------DIETGQCLH---VLMGHVAAVR--CVQYDGRRVVSGAYDF 574
Query: 517 TACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEG 576
VW + T +GH ++S++F + V++ S D +I++W + G+C+ T G
Sbjct: 575 MVKVWDPETETCLHTLQGHTNRVYSLQFDGIH--VVSGSLDTSIRVWDVETGNCIHTLTG 632
Query: 577 HTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYD---KHEDKIWALAVGKKTE 633
H S L + + +VS AD VK+W ++TG+C+ T KH+ + L K
Sbjct: 633 HQS--LTSGMELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPHKHQSAVTCLQFNKN-- 688
Query: 634 MFATGGSDALVNLW 647
T D V LW
Sbjct: 689 FVITSSDDGTVKLW 702
Score = 202 (76.2 bits), Expect = 1.8e-12, P = 1.8e-12
Identities = 48/170 (28%), Positives = 83/170 (48%)
Query: 483 NLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSV 542
+LK+ V+ H + + + +V +GS D T VW + T GH G+WS
Sbjct: 422 DLKSPKVLKGHDDHVITCLQFCGNRIV-SGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSS 480
Query: 543 EFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLV 602
+ D ++I+ S D+T+K+W+ G C+ T GHTS+V R L ++VS D +
Sbjct: 481 QMR--DNIIISGSTDRTLKVWNAETGECIHTLYGHTSTV-RCMHLHE-KRVVSGSRDATL 536
Query: 603 KLWTVRTGECIATYDKHEDKIWALAV-GKKTEMFATGGSDALVNLWHDST 651
++W + TG+C+ H + + G++ +G D +V +W T
Sbjct: 537 RVWDIETGQCLHVLMGHVAAVRCVQYDGRRV---VSGAYDFMVKVWDPET 583
Score = 198 (74.8 bits), Expect = 4.8e-12, P = 4.8e-12
Identities = 51/172 (29%), Positives = 81/172 (47%)
Query: 56 IEGGSD-TITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPSG 114
++G D IT L + + S ++VW T KCLR+ GH G +
Sbjct: 429 LKGHDDHVITCLQFCGNR--IVSGSDDNTLKVWSAVTGKCLRTLVGHTGGV--WSSQMRD 484
Query: 115 GLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWD 174
++ + DR + VW+ + G C H GH V + H +K ++ SGS DAT+RVWD
Sbjct: 485 NIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLH---EKRVV-SGSRDATLRVWD 540
Query: 175 LLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTV 226
+ +C+ L H + V + DG ++S D +V +WD +C T+
Sbjct: 541 IETGQCLHVLMGHVAAVR--CVQYDGRRVVSGAYDFMVKVWDPETETCLHTL 590
Score = 176 (67.0 bits), Expect = 9.9e-21, Sum P(2) = 9.9e-21
Identities = 40/147 (27%), Positives = 70/147 (47%)
Query: 505 NDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWS 564
++ V +GS+D T VW + + GH + V++ + V++ + D +K+W
Sbjct: 523 HEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYD--GRRVVSGAYDFMVKVWD 580
Query: 565 ISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIW 624
+CL T +GHT+ V F G +VS D +++W V TG CI T H+
Sbjct: 581 PETETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTS 638
Query: 625 ALAVGKKTEMFATGGSDALVNLWHDST 651
+ + K + +G +D+ V +W T
Sbjct: 639 GMEL--KDNILVSGNADSTVKIWDIKT 663
Score = 176 (67.0 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 44/139 (31%), Positives = 65/139 (46%)
Query: 514 QDRTACVWRLPDLVSVVTFRGHK-RGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLK 572
Q R WR DL S +GH I ++F +++ S D T+K+WS G CL+
Sbjct: 411 QHRIDTNWRRGDLKSPKVLKGHDDHVITCLQFC--GNRIVSGSDDNTLKVWSAVTGKCLR 468
Query: 573 TFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKT 632
T GHT V + R I+S D +K+W TGECI T H + + + +K
Sbjct: 469 TLVGHTGGVWSSQM--RDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKR 526
Query: 633 EMFATGGSDALVNLWHDST 651
+ +G DA + +W T
Sbjct: 527 VV--SGSRDATLRVWDIET 543
Score = 173 (66.0 bits), Expect = 2.1e-20, Sum P(2) = 2.1e-20
Identities = 56/177 (31%), Positives = 82/177 (46%)
Query: 441 MGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSL 500
MG V AV + +VSG+ D +KVW D E L + H + SL
Sbjct: 551 MGHVAAVRCVQYDGRRVVSGAYDFMVKVW-------DPETETCLHT---LQGHTNRVYSL 600
Query: 501 AVAPNDSL-VCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKT 559
D + V +GS D + VW + + T GH+ +E D ++++ + D T
Sbjct: 601 QF---DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELK--DNILVSGNADST 655
Query: 560 IKIWSISDGSCLKTFEG---HTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECI 613
+KIW I G CL+T +G H S+V F +++ DG VKLW +RTGE I
Sbjct: 656 VKIWDIKTGQCLQTLQGPHKHQSAVTCLQFNKNF--VITSSDDGTVKLWDLRTGEFI 710
Score = 160 (61.4 bits), Expect = 6.3e-08, P = 6.3e-08
Identities = 42/162 (25%), Positives = 74/162 (45%)
Query: 27 VSSDGSFIACACGE-SINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIR 85
V DG + + + + D + T++G ++ + +L D + S IR
Sbjct: 560 VQYDGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIR 617
Query: 86 VWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKG--- 142
VWD+ T C+ + GH GM + +L + AD V +WD+ G C +G
Sbjct: 618 VWDVETGNCIHTLTGHQSLTSGMELKDN--ILVSGNADSTVKIWDIKTGQCLQTLQGPHK 675
Query: 143 HKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATL 184
H+ V+ + F+ K+ + + SDD TV++WDL + + L
Sbjct: 676 HQSAVTCLQFN----KNFVITSSDDGTVKLWDLRTGEFIRNL 713
Score = 155 (59.6 bits), Expect = 1.4e-23, Sum P(2) = 1.4e-23
Identities = 45/151 (29%), Positives = 66/151 (43%)
Query: 76 FSSGHSREIRV---WDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVL-VWDV 131
+ S + R+ R+ W LK + KGHD I C G +G+D L VW
Sbjct: 404 WKSAYIRQHRIDTNWRRGDLKSPKVLKGHDDHVI--TCLQFCGNRIVSGSDDNTLKVWSA 461
Query: 132 DGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRV 191
G C GH G V S + ++ SGS D T++VW+ +C+ TL H S V
Sbjct: 462 VTGKCLRTLVGHTGGVWSSQMRDN----IIISGSTDRTLKVWNAETGECIHTLYGHTSTV 517
Query: 192 TSMAITSDGSTLISAGRDKVVNLWDLRDYSC 222
M + ++S RD + +WD+ C
Sbjct: 518 RCMHLHE--KRVVSGSRDATLRVWDIETGQC 546
Score = 144 (55.7 bits), Expect = 3.4e-06, P = 3.4e-06
Identities = 72/313 (23%), Positives = 135/313 (43%)
Query: 167 DATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTV 226
D R DL + K + D H +T + G+ ++S D + +W C T
Sbjct: 415 DTNWRRGDLKSPKVLKGHDDHV--ITCLQFC--GNRIVSGSDDNTLKVWSAVTGKCLRT- 469
Query: 227 PTYEMVEAVCAIPPGSAFDSFL-SSYNQQTIKK-KRRSLE-IHFITVGERGIVRMWNADS 283
+V + D+ + S +T+K + E IH + G VR +
Sbjct: 470 ----LVGHTGGVWSSQMRDNIIISGSTDRTLKVWNAETGECIHTL-YGHTSTVRCMHLHE 524
Query: 284 ACLYEQKSSDVTISFEMDDSKRGFTAATVLPSNQGLLCVTADQQLLL---YT-TVEVPEK 339
+ S D T+ + D + G ++ + CV D + ++ Y V+V +
Sbjct: 525 KRVVSG-SRDATL--RVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDP 581
Query: 340 KMELILSKRLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIV 399
+ E L L G+ + L+F G ++ T+I +V+D+ + +C + L GH +
Sbjct: 582 ETETCLHT-LQGHTNRVYSLQFDGIHVVSGSLDTSI---RVWDVETGNCIHTLTGHQSL- 636
Query: 400 LCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTG---HMGAVGAVAFSKKLQNF 456
T + ++V+G+ D++V++WD ++ C+ G H AV + F+K NF
Sbjct: 637 ----TSGMELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPHKHQSAVTCLQFNK---NF 689
Query: 457 LVSGSSDHTIKVW 469
+++ S D T+K+W
Sbjct: 690 VITSSDDGTVKLW 702
Score = 143 (55.4 bits), Expect = 3.4e-17, Sum P(2) = 3.4e-17
Identities = 44/171 (25%), Positives = 82/171 (47%)
Query: 405 CALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDH 464
C G+ +V+G+ D V++WD E+ C+ GH V ++ F +VSGS D
Sbjct: 559 CVQYDGR-RVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFDGI---HVVSGSLDT 614
Query: 465 TIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLP 524
+I+VW D E + + H + + S + D+++ +G+ D T +W +
Sbjct: 615 SIRVW-------DVETGNCIHT---LTGH-QSLTS-GMELKDNILVSGNADSTVKIWDIK 662
Query: 525 DLVSVVTFRG---HKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLK 572
+ T +G H+ + ++F+ VIT+S D T+K+W + G ++
Sbjct: 663 TGQCLQTLQGPHKHQSAVTCLQFNK--NFVITSSDDGTVKLWDLRTGEFIR 711
>UNIPROTKB|G3N3E5 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9913
"Bos taurus" [GO:0071339 "MLL1 complex" evidence=IEA] [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IEA]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=IEA] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=IEA] [GO:0043966 "histone H3
acetylation" evidence=IEA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IEA] [GO:0005671
"Ada2/Gcn5/Ada3 transcription activator complex" evidence=IEA]
[GO:0001501 "skeletal system development" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0001501
GO:GO:0005671 GO:GO:0042800 GO:GO:0048188 GO:GO:0071339
GO:GO:0043966 GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 OMA:KLWKSDT EMBL:DAAA02032365
Ensembl:ENSBTAT00000066090 Uniprot:G3N3E5
Length = 308
Score = 280 (103.6 bits), Expect = 1.5e-23, P = 1.5e-23
Identities = 83/314 (26%), Positives = 145/314 (46%)
Query: 340 KMELILSKRLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIV 399
K L L G+ + + +KF E +LA ++ + ++++ ++GH
Sbjct: 6 KPNYALKFTLAGHTKAVSSVKFSPNGE-WLASSSADKLIKIWGAYDGKFEKTISGHK--- 61
Query: 400 LCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVS 459
L + A SS L+V+ S D ++++WD S C+ GH V F+ + N +VS
Sbjct: 62 LGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQ-SNLIVS 120
Query: 460 GSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTAC 519
GS D ++++W D + LK + AH ++++ + SL+ + S D
Sbjct: 121 GSFDESVRIW-------DVKTGKCLKT---LPAHSDPVSAVHFNRDGSLIVSSSYDGLCR 170
Query: 520 VWRLPDLVSVVTFRGHKRGIWS-VEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHT 578
+W + T S V+FSP + ++ A+ D T+K+W S G CLKT+ GH
Sbjct: 171 IWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHK 230
Query: 579 SS--VLRASF-LTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMF 635
+ + A+F +T G IVS D LV +W ++T E + H D + + A +
Sbjct: 231 NEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENII 290
Query: 636 ATGG--SDALVNLW 647
A+ +D + LW
Sbjct: 291 ASAALENDKTIKLW 304
Score = 255 (94.8 bits), Expect = 7.3e-21, P = 7.3e-21
Identities = 54/178 (30%), Positives = 91/178 (51%)
Query: 49 NASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGM 108
N ++K T+ G + ++++ SP+ + L SS + I++W K ++ GH +
Sbjct: 8 NYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDV 67
Query: 109 ACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDA 168
A LL +A D+ + +WDV G C KGH V F+P ++ L+ SGS D
Sbjct: 68 AWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSN--LIVSGSFDE 125
Query: 169 TVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTV 226
+VR+WD+ KC+ TL H V+++ DGS ++S+ D + +WD C T+
Sbjct: 126 SVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTL 183
Score = 255 (94.8 bits), Expect = 7.3e-21, P = 7.3e-21
Identities = 59/200 (29%), Positives = 97/200 (48%)
Query: 28 SSDGSFIACACGES-INIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRV 86
S +G ++A + + I I + + TI G I+ +A S D LL S+ + +++
Sbjct: 28 SPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKI 87
Query: 87 WDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGV 146
WD+S+ KCL++ KGH +P L+ + D V +WDV G C H
Sbjct: 88 WDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDP 147
Query: 147 VSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATL-DKHFSRVTSMAITSDGSTLIS 205
VS++ H + D SL+ S S D R+WD + +C+ TL D V+ + + +G +++
Sbjct: 148 VSAV--HFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILA 205
Query: 206 AGRDKVVNLWDLRDYSCKLT 225
A D + LWD C T
Sbjct: 206 ATLDNTLKLWDYSKGKCLKT 225
Score = 216 (81.1 bits), Expect = 1.7e-15, P = 1.7e-15
Identities = 59/238 (24%), Positives = 108/238 (45%)
Query: 28 SSDGSFIACACGE-SINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRV 86
SSD + + A + ++ I D+S+ T++G S+ + +P L+ S +R+
Sbjct: 70 SSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRI 129
Query: 87 WDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTH-YFKGHKG 145
WD+ T KCL++ H P + + G L+ ++ D +WD G C
Sbjct: 130 WDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNP 189
Query: 146 VVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKH----FSRVTSMAITSDGS 201
VS + F P+ K +L + D+ T+++WD KC+ T H + + ++T G
Sbjct: 190 PVSFVKFSPN-GKYILAATLDN-TLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTG-GK 246
Query: 202 TLISAGRDKVVNLWDL--RDYSCKLTVPTYEMVEAVCAIPPGSAFDSFLSSYNQQTIK 257
++S D +V +W+L ++ KL T ++ C P + + N +TIK
Sbjct: 247 WIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACH--PTENIIASAALENDKTIK 302
Score = 212 (79.7 bits), Expect = 6.1e-15, P = 6.1e-15
Identities = 58/195 (29%), Positives = 89/195 (45%)
Query: 25 LVVSSDGSFIACACGESINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREI 84
L+VS GSF ES+ I D+ T+ SD ++A+ + D L+ SS +
Sbjct: 117 LIVS--GSF-----DESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLC 169
Query: 85 RVWDLSTLKCLRSWKGHDGPAIGMA-CHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGH 143
R+WD ++ +CL++ D P + P+G + A D + +WD G C + GH
Sbjct: 170 RIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGH 229
Query: 144 KGVVSSILFHPD-TDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGST 202
K I + T + SGS+D V +W+L K+ V L H V S A +
Sbjct: 230 KNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENI 289
Query: 203 LISAG--RDKVVNLW 215
+ SA DK + LW
Sbjct: 290 IASAALENDKTIKLW 304
Score = 196 (74.1 bits), Expect = 6.7e-13, P = 6.7e-13
Identities = 49/155 (31%), Positives = 79/155 (50%)
Query: 100 GHDGPAIGMACHPSGGLLATAGADRKVLVWDV-DGGFCTHYFKGHKGVVSSILFHPDTDK 158
GH + P+G LA++ AD+ + +W DG F GHK +S + + +D
Sbjct: 17 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKF-EKTISGHKLGISDVAW--SSDS 73
Query: 159 SLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLR 218
+LL S SDD T+++WD+ + KC+ TL H + V + ++S D+ V +WD++
Sbjct: 74 NLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVK 133
Query: 219 DYSCKLTVPTY-EMVEAVCAIPPGSAFDSFLSSYN 252
C T+P + + V AV GS S SSY+
Sbjct: 134 TGKCLKTLPAHSDPVSAVHFNRDGSLIVS--SSYD 166
Score = 188 (71.2 bits), Expect = 6.1e-12, P = 6.1e-12
Identities = 37/128 (28%), Positives = 63/128 (49%)
Query: 524 PDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLR 583
P+ T GH + + SV+FSP + + ++S DK IKIW DG KT GH +
Sbjct: 7 PNYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISD 66
Query: 584 ASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDAL 643
++ + +VS D +K+W V +G+C+ T H + ++ ++ + +G D
Sbjct: 67 VAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDES 126
Query: 644 VNLWHDST 651
V +W T
Sbjct: 127 VRIWDVKT 134
Score = 166 (63.5 bits), Expect = 2.2e-09, P = 2.2e-09
Identities = 65/302 (21%), Positives = 123/302 (40%)
Query: 142 GHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGS 201
GH VSS+ F P+ + L S S D +++W K T+ H ++ +A +SD +
Sbjct: 17 GHTKAVSSVKFSPNGE--WLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSN 74
Query: 202 TLISAGRDKVVNLWDLRDYSCKLTVPTYEMVEAVCAIPPGS------AFDSFLSSYNQQT 255
L+SA DK + +WD+ C T+ + C P S +FD + ++ +T
Sbjct: 75 LLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKT 134
Query: 256 IKKKRRSLEIHFITVG------ERGIVRMWNADSACLYEQKSSDVTISFEMDDSKRGFTA 309
K ++L H V + ++ + D C +S + +DD +
Sbjct: 135 -GKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSF 193
Query: 310 ATVLPSNQGLLCVTADQQLLLYTTVEVPEKKMELILSKRLVGYNEE--ILDLKFLGEEEQ 367
P+ + +L T D L L+ K + + K G+ E + F +
Sbjct: 194 VKFSPNGKYILAATLDNTLKLWDY-----SKGKCL--KTYTGHKNEKYCIFANFSVTGGK 246
Query: 368 YLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWD 427
++ + V +++L + L GH+++V+ C + I D +++LW
Sbjct: 247 WIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVIST-ACHPTENIIASAALENDKTIKLWK 305
Query: 428 SE 429
S+
Sbjct: 306 SD 307
Score = 145 (56.1 bits), Expect = 5.2e-07, P = 5.2e-07
Identities = 67/307 (21%), Positives = 136/307 (44%)
Query: 183 TLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYEMVEAVCAIPPGS 242
TL H V+S+ + +G L S+ DK++ +W D + T+ +++ + + S
Sbjct: 14 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKL--GISDVAWSS 71
Query: 243 AFDSFLSSYNQQTIKKKRRSLEIHFITVGE--RGIVRMWNADSACLYEQKSSDVTISFEM 300
+ +S+ + +T+K I ++ G+ + + N C + +S+ + +S
Sbjct: 72 DSNLLVSASDDKTLK-------IWDVSSGKCLKTLKGHSNYVFCCNFNPQSN-LIVSGSF 123
Query: 301 DDSKRGFTAAT-----VLPSNQGLLCVT---ADQQLLLYTTVE----VPEKKMELILSKR 348
D+S R + T LP++ + D L++ ++ + + + L
Sbjct: 124 DESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTL 183
Query: 349 LVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCL-DTCAL 407
+ N + +KF +Y+ AT ++++D S C GH C+ ++
Sbjct: 184 IDDDNPPVSFVKF-SPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSV 242
Query: 408 SSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGS--SDHT 465
+ GK IV+GS+DN V +W+ +++ V GH V + A +N + S + +D T
Sbjct: 243 TGGK-WIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTA-CHPTENIIASAALENDKT 300
Query: 466 IKVWSFD 472
IK+W D
Sbjct: 301 IKLWKSD 307
>UNIPROTKB|Q2KIG2 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9913
"Bos taurus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISS] [GO:0035064 "methylated histone residue binding"
evidence=ISS] [GO:0046972 "histone acetyltransferase activity
(H4-K16 specific)" evidence=ISS] [GO:0043996 "histone
acetyltransferase activity (H4-K8 specific)" evidence=ISS]
[GO:0043995 "histone acetyltransferase activity (H4-K5 specific)"
evidence=ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISS] [GO:0043982 "histone H4-K8 acetylation" evidence=ISS]
[GO:0043981 "histone H4-K5 acetylation" evidence=ISS] [GO:0048188
"Set1C/COMPASS complex" evidence=ISS] [GO:0035097 "histone
methyltransferase complex" evidence=ISS] [GO:0051568 "histone H3-K4
methylation" evidence=ISS] [GO:0071339 "MLL1 complex" evidence=ISS]
[GO:0034968 "histone lysine methylation" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351
GO:GO:0035064 GO:GO:0048188 GO:GO:0051568 GO:GO:0071339
GO:GO:0000123 GO:GO:0043981 GO:GO:0043982 GO:GO:0043984 HSSP:P61964
KO:K14963 HOVERGEN:HBG055117 EMBL:BC112650 IPI:IPI00711741
RefSeq:NP_001098945.1 UniGene:Bt.39594 ProteinModelPortal:Q2KIG2
SMR:Q2KIG2 GeneID:100125836 KEGG:bta:100125836 CTD:11091
NextBio:20788854 Uniprot:Q2KIG2
Length = 334
Score = 280 (103.6 bits), Expect = 1.5e-23, P = 1.5e-23
Identities = 83/314 (26%), Positives = 145/314 (46%)
Query: 340 KMELILSKRLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIV 399
K L L G+ + + +KF E +LA ++ + ++++ ++GH
Sbjct: 32 KPNYALKFTLAGHTKAVSSVKFSPNGE-WLASSSADKLIKIWGAYDGKFEKTISGHK--- 87
Query: 400 LCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVS 459
L + A SS L+V+ S D ++++WD S C+ GH V F+ + N +VS
Sbjct: 88 LGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQ-SNLIVS 146
Query: 460 GSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTAC 519
GS D ++++W D + LK + AH ++++ + SL+ + S D
Sbjct: 147 GSFDESVRIW-------DVKTGKCLKT---LPAHSDPVSAVHFNRDGSLIVSSSYDGLCR 196
Query: 520 VWRLPDLVSVVTFRGHKRGIWS-VEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHT 578
+W + T S V+FSP + ++ A+ D T+K+W S G CLKT+ GH
Sbjct: 197 IWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHK 256
Query: 579 SS--VLRASF-LTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMF 635
+ + A+F +T G IVS D LV +W ++T E + H D + + A +
Sbjct: 257 NEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENII 316
Query: 636 ATGG--SDALVNLW 647
A+ +D + LW
Sbjct: 317 ASAALENDKTIKLW 330
Score = 255 (94.8 bits), Expect = 7.3e-21, P = 7.3e-21
Identities = 54/178 (30%), Positives = 91/178 (51%)
Query: 49 NASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGM 108
N ++K T+ G + ++++ SP+ + L SS + I++W K ++ GH +
Sbjct: 34 NYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDV 93
Query: 109 ACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDA 168
A LL +A D+ + +WDV G C KGH V F+P ++ L+ SGS D
Sbjct: 94 AWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSN--LIVSGSFDE 151
Query: 169 TVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTV 226
+VR+WD+ KC+ TL H V+++ DGS ++S+ D + +WD C T+
Sbjct: 152 SVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTL 209
Score = 255 (94.8 bits), Expect = 7.3e-21, P = 7.3e-21
Identities = 59/200 (29%), Positives = 97/200 (48%)
Query: 28 SSDGSFIACACGES-INIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRV 86
S +G ++A + + I I + + TI G I+ +A S D LL S+ + +++
Sbjct: 54 SPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKI 113
Query: 87 WDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGV 146
WD+S+ KCL++ KGH +P L+ + D V +WDV G C H
Sbjct: 114 WDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDP 173
Query: 147 VSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATL-DKHFSRVTSMAITSDGSTLIS 205
VS++ H + D SL+ S S D R+WD + +C+ TL D V+ + + +G +++
Sbjct: 174 VSAV--HFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILA 231
Query: 206 AGRDKVVNLWDLRDYSCKLT 225
A D + LWD C T
Sbjct: 232 ATLDNTLKLWDYSKGKCLKT 251
Score = 216 (81.1 bits), Expect = 4.7e-15, P = 4.7e-15
Identities = 59/238 (24%), Positives = 108/238 (45%)
Query: 28 SSDGSFIACACGE-SINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRV 86
SSD + + A + ++ I D+S+ T++G S+ + +P L+ S +R+
Sbjct: 96 SSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRI 155
Query: 87 WDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTH-YFKGHKG 145
WD+ T KCL++ H P + + G L+ ++ D +WD G C
Sbjct: 156 WDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNP 215
Query: 146 VVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKH----FSRVTSMAITSDGS 201
VS + F P+ K +L + D+ T+++WD KC+ T H + + ++T G
Sbjct: 216 PVSFVKFSPN-GKYILAATLDN-TLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTG-GK 272
Query: 202 TLISAGRDKVVNLWDL--RDYSCKLTVPTYEMVEAVCAIPPGSAFDSFLSSYNQQTIK 257
++S D +V +W+L ++ KL T ++ C P + + N +TIK
Sbjct: 273 WIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACH--PTENIIASAALENDKTIK 328
Score = 212 (79.7 bits), Expect = 1.4e-14, P = 1.4e-14
Identities = 58/195 (29%), Positives = 89/195 (45%)
Query: 25 LVVSSDGSFIACACGESINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREI 84
L+VS GSF ES+ I D+ T+ SD ++A+ + D L+ SS +
Sbjct: 143 LIVS--GSF-----DESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLC 195
Query: 85 RVWDLSTLKCLRSWKGHDGPAIGMA-CHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGH 143
R+WD ++ +CL++ D P + P+G + A D + +WD G C + GH
Sbjct: 196 RIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGH 255
Query: 144 KGVVSSILFHPD-TDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGST 202
K I + T + SGS+D V +W+L K+ V L H V S A +
Sbjct: 256 KNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENI 315
Query: 203 LISAG--RDKVVNLW 215
+ SA DK + LW
Sbjct: 316 IASAALENDKTIKLW 330
Score = 196 (74.1 bits), Expect = 1.1e-12, P = 1.1e-12
Identities = 49/155 (31%), Positives = 79/155 (50%)
Query: 100 GHDGPAIGMACHPSGGLLATAGADRKVLVWDV-DGGFCTHYFKGHKGVVSSILFHPDTDK 158
GH + P+G LA++ AD+ + +W DG F GHK +S + + +D
Sbjct: 43 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKF-EKTISGHKLGISDVAW--SSDS 99
Query: 159 SLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLR 218
+LL S SDD T+++WD+ + KC+ TL H + V + ++S D+ V +WD++
Sbjct: 100 NLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVK 159
Query: 219 DYSCKLTVPTY-EMVEAVCAIPPGSAFDSFLSSYN 252
C T+P + + V AV GS S SSY+
Sbjct: 160 TGKCLKTLPAHSDPVSAVHFNRDGSLIVS--SSYD 192
Score = 188 (71.2 bits), Expect = 9.1e-12, P = 9.1e-12
Identities = 37/128 (28%), Positives = 63/128 (49%)
Query: 524 PDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLR 583
P+ T GH + + SV+FSP + + ++S DK IKIW DG KT GH +
Sbjct: 33 PNYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISD 92
Query: 584 ASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDAL 643
++ + +VS D +K+W V +G+C+ T H + ++ ++ + +G D
Sbjct: 93 VAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDES 152
Query: 644 VNLWHDST 651
V +W T
Sbjct: 153 VRIWDVKT 160
Score = 166 (63.5 bits), Expect = 2.9e-09, P = 2.9e-09
Identities = 65/302 (21%), Positives = 123/302 (40%)
Query: 142 GHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGS 201
GH VSS+ F P+ + L S S D +++W K T+ H ++ +A +SD +
Sbjct: 43 GHTKAVSSVKFSPNGE--WLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSN 100
Query: 202 TLISAGRDKVVNLWDLRDYSCKLTVPTYEMVEAVCAIPPGS------AFDSFLSSYNQQT 255
L+SA DK + +WD+ C T+ + C P S +FD + ++ +T
Sbjct: 101 LLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKT 160
Query: 256 IKKKRRSLEIHFITVG------ERGIVRMWNADSACLYEQKSSDVTISFEMDDSKRGFTA 309
K ++L H V + ++ + D C +S + +DD +
Sbjct: 161 -GKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSF 219
Query: 310 ATVLPSNQGLLCVTADQQLLLYTTVEVPEKKMELILSKRLVGYNEE--ILDLKFLGEEEQ 367
P+ + +L T D L L+ K + + K G+ E + F +
Sbjct: 220 VKFSPNGKYILAATLDNTLKLWDY-----SKGKCL--KTYTGHKNEKYCIFANFSVTGGK 272
Query: 368 YLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWD 427
++ + V +++L + L GH+++V+ C + I D +++LW
Sbjct: 273 WIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVIST-ACHPTENIIASAALENDKTIKLWK 331
Query: 428 SE 429
S+
Sbjct: 332 SD 333
Score = 145 (56.1 bits), Expect = 6.5e-07, P = 6.5e-07
Identities = 67/307 (21%), Positives = 136/307 (44%)
Query: 183 TLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYEMVEAVCAIPPGS 242
TL H V+S+ + +G L S+ DK++ +W D + T+ +++ + + S
Sbjct: 40 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKL--GISDVAWSS 97
Query: 243 AFDSFLSSYNQQTIKKKRRSLEIHFITVGE--RGIVRMWNADSACLYEQKSSDVTISFEM 300
+ +S+ + +T+K I ++ G+ + + N C + +S+ + +S
Sbjct: 98 DSNLLVSASDDKTLK-------IWDVSSGKCLKTLKGHSNYVFCCNFNPQSN-LIVSGSF 149
Query: 301 DDSKRGFTAAT-----VLPSNQGLLCVT---ADQQLLLYTTVE----VPEKKMELILSKR 348
D+S R + T LP++ + D L++ ++ + + + L
Sbjct: 150 DESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTL 209
Query: 349 LVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCL-DTCAL 407
+ N + +KF +Y+ AT ++++D S C GH C+ ++
Sbjct: 210 IDDDNPPVSFVKF-SPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSV 268
Query: 408 SSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGS--SDHT 465
+ GK IV+GS+DN V +W+ +++ V GH V + A +N + S + +D T
Sbjct: 269 TGGK-WIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTA-CHPTENIIASAALENDKT 326
Query: 466 IKVWSFD 472
IK+W D
Sbjct: 327 IKLWKSD 333
>UNIPROTKB|P61964 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9606
"Homo sapiens" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0001501 "skeletal system
development" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0048188 "Set1C/COMPASS complex" evidence=IDA]
[GO:0035097 "histone methyltransferase complex" evidence=IDA]
[GO:0051568 "histone H3-K4 methylation" evidence=IDA] [GO:0071339
"MLL1 complex" evidence=IDA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IDA] [GO:0043984 "histone
H4-K16 acetylation" evidence=IDA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IDA]
[GO:0000123 "histone acetyltransferase complex" evidence=IDA]
[GO:0043981 "histone H4-K5 acetylation" evidence=IDA] [GO:0043995
"histone acetyltransferase activity (H4-K5 specific)" evidence=IDA]
[GO:0043982 "histone H4-K8 acetylation" evidence=IDA] [GO:0043996
"histone acetyltransferase activity (H4-K8 specific)" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0043966 "histone H3
acetylation" evidence=IDA] [GO:0005671 "Ada2/Gcn5/Ada3
transcription activator complex" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0048188 GO:GO:0051568 GO:GO:0071339
Pathway_Interaction_DB:circadianpathway GO:GO:0043966 GO:GO:0043981
GO:GO:0043982 PDB:4A7J PDBsum:4A7J GO:GO:0043984 PDB:3EG6 PDB:3EMH
PDB:3P4F PDB:4ESG PDBsum:3EG6 PDBsum:3EMH PDBsum:3P4F PDBsum:4ESG
PDB:3UVK PDB:4ERQ PDBsum:3UVK PDBsum:4ERQ PDB:3UVL PDB:4ERY
PDBsum:3UVL PDBsum:4ERY PDB:3UVM PDB:4ERZ PDBsum:3UVM PDBsum:4ERZ
PDB:3UVN PDB:4EWR PDBsum:3UVN PDBsum:4EWR PDB:3UVO PDB:4ES0
PDBsum:3UVO PDBsum:4ES0 KO:K14963 HOGENOM:HOG000091642 OMA:KLWKSDT
HOVERGEN:HBG055117 CTD:11091 EMBL:AJ011376 EMBL:AK000552
EMBL:BC001635 IPI:IPI00005492 RefSeq:NP_060058.1 RefSeq:NP_438172.1
UniGene:Hs.397638 PDB:2CNX PDB:2CO0 PDB:2G99 PDB:2G9A PDB:2GNQ
PDB:2H13 PDB:2H14 PDB:2H68 PDB:2H6K PDB:2H6N PDB:2H6Q PDB:2H9L
PDB:2H9M PDB:2H9N PDB:2H9P PDB:2O9K PDB:3MXX PDB:3N0D PDB:3N0E
PDB:3PSL PDB:3SMR PDB:3UR4 PDB:4IA9 PDBsum:2CNX PDBsum:2CO0
PDBsum:2G99 PDBsum:2G9A PDBsum:2GNQ PDBsum:2H13 PDBsum:2H14
PDBsum:2H68 PDBsum:2H6K PDBsum:2H6N PDBsum:2H6Q PDBsum:2H9L
PDBsum:2H9M PDBsum:2H9N PDBsum:2H9P PDBsum:2O9K PDBsum:3MXX
PDBsum:3N0D PDBsum:3N0E PDBsum:3PSL PDBsum:3SMR PDBsum:3UR4
PDBsum:4IA9 ProteinModelPortal:P61964 SMR:P61964 DIP:DIP-29223N
IntAct:P61964 MINT:MINT-1464227 STRING:P61964 PhosphoSite:P61964
DMDM:48429182 PaxDb:P61964 PRIDE:P61964 DNASU:11091
Ensembl:ENST00000358625 Ensembl:ENST00000425041 GeneID:11091
KEGG:hsa:11091 UCSC:uc004cey.3 GeneCards:GC09P137001
HGNC:HGNC:12757 MIM:609012 neXtProt:NX_P61964 PharmGKB:PA37361
InParanoid:P61964 OrthoDB:EOG4QVCCF PhylomeDB:P61964
BindingDB:P61964 ChEMBL:CHEMBL1075317 EvolutionaryTrace:P61964
GenomeRNAi:11091 NextBio:42156 Bgee:P61964 CleanEx:HS_WDR5
Genevestigator:P61964 GermOnline:ENSG00000196363 Uniprot:P61964
Length = 334
Score = 280 (103.6 bits), Expect = 1.5e-23, P = 1.5e-23
Identities = 83/314 (26%), Positives = 145/314 (46%)
Query: 340 KMELILSKRLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIV 399
K L L G+ + + +KF E +LA ++ + ++++ ++GH
Sbjct: 32 KPNYALKFTLAGHTKAVSSVKFSPNGE-WLASSSADKLIKIWGAYDGKFEKTISGHK--- 87
Query: 400 LCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVS 459
L + A SS L+V+ S D ++++WD S C+ GH V F+ + N +VS
Sbjct: 88 LGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQ-SNLIVS 146
Query: 460 GSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTAC 519
GS D ++++W D + LK + AH ++++ + SL+ + S D
Sbjct: 147 GSFDESVRIW-------DVKTGKCLKT---LPAHSDPVSAVHFNRDGSLIVSSSYDGLCR 196
Query: 520 VWRLPDLVSVVTFRGHKRGIWS-VEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHT 578
+W + T S V+FSP + ++ A+ D T+K+W S G CLKT+ GH
Sbjct: 197 IWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHK 256
Query: 579 SS--VLRASF-LTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMF 635
+ + A+F +T G IVS D LV +W ++T E + H D + + A +
Sbjct: 257 NEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENII 316
Query: 636 ATGG--SDALVNLW 647
A+ +D + LW
Sbjct: 317 ASAALENDKTIKLW 330
Score = 255 (94.8 bits), Expect = 7.3e-21, P = 7.3e-21
Identities = 54/178 (30%), Positives = 91/178 (51%)
Query: 49 NASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGM 108
N ++K T+ G + ++++ SP+ + L SS + I++W K ++ GH +
Sbjct: 34 NYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDV 93
Query: 109 ACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDA 168
A LL +A D+ + +WDV G C KGH V F+P ++ L+ SGS D
Sbjct: 94 AWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSN--LIVSGSFDE 151
Query: 169 TVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTV 226
+VR+WD+ KC+ TL H V+++ DGS ++S+ D + +WD C T+
Sbjct: 152 SVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTL 209
Score = 255 (94.8 bits), Expect = 7.3e-21, P = 7.3e-21
Identities = 59/200 (29%), Positives = 97/200 (48%)
Query: 28 SSDGSFIACACGES-INIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRV 86
S +G ++A + + I I + + TI G I+ +A S D LL S+ + +++
Sbjct: 54 SPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKI 113
Query: 87 WDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGV 146
WD+S+ KCL++ KGH +P L+ + D V +WDV G C H
Sbjct: 114 WDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDP 173
Query: 147 VSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATL-DKHFSRVTSMAITSDGSTLIS 205
VS++ H + D SL+ S S D R+WD + +C+ TL D V+ + + +G +++
Sbjct: 174 VSAV--HFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILA 231
Query: 206 AGRDKVVNLWDLRDYSCKLT 225
A D + LWD C T
Sbjct: 232 ATLDNTLKLWDYSKGKCLKT 251
Score = 216 (81.1 bits), Expect = 4.7e-15, P = 4.7e-15
Identities = 59/238 (24%), Positives = 108/238 (45%)
Query: 28 SSDGSFIACACGE-SINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRV 86
SSD + + A + ++ I D+S+ T++G S+ + +P L+ S +R+
Sbjct: 96 SSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRI 155
Query: 87 WDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTH-YFKGHKG 145
WD+ T KCL++ H P + + G L+ ++ D +WD G C
Sbjct: 156 WDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNP 215
Query: 146 VVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKH----FSRVTSMAITSDGS 201
VS + F P+ K +L + D+ T+++WD KC+ T H + + ++T G
Sbjct: 216 PVSFVKFSPN-GKYILAATLDN-TLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTG-GK 272
Query: 202 TLISAGRDKVVNLWDL--RDYSCKLTVPTYEMVEAVCAIPPGSAFDSFLSSYNQQTIK 257
++S D +V +W+L ++ KL T ++ C P + + N +TIK
Sbjct: 273 WIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACH--PTENIIASAALENDKTIK 328
Score = 212 (79.7 bits), Expect = 1.4e-14, P = 1.4e-14
Identities = 58/195 (29%), Positives = 89/195 (45%)
Query: 25 LVVSSDGSFIACACGESINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREI 84
L+VS GSF ES+ I D+ T+ SD ++A+ + D L+ SS +
Sbjct: 143 LIVS--GSF-----DESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLC 195
Query: 85 RVWDLSTLKCLRSWKGHDGPAIGMA-CHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGH 143
R+WD ++ +CL++ D P + P+G + A D + +WD G C + GH
Sbjct: 196 RIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGH 255
Query: 144 KGVVSSILFHPD-TDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGST 202
K I + T + SGS+D V +W+L K+ V L H V S A +
Sbjct: 256 KNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENI 315
Query: 203 LISAG--RDKVVNLW 215
+ SA DK + LW
Sbjct: 316 IASAALENDKTIKLW 330
Score = 196 (74.1 bits), Expect = 1.1e-12, P = 1.1e-12
Identities = 49/155 (31%), Positives = 79/155 (50%)
Query: 100 GHDGPAIGMACHPSGGLLATAGADRKVLVWDV-DGGFCTHYFKGHKGVVSSILFHPDTDK 158
GH + P+G LA++ AD+ + +W DG F GHK +S + + +D
Sbjct: 43 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKF-EKTISGHKLGISDVAW--SSDS 99
Query: 159 SLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLR 218
+LL S SDD T+++WD+ + KC+ TL H + V + ++S D+ V +WD++
Sbjct: 100 NLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVK 159
Query: 219 DYSCKLTVPTY-EMVEAVCAIPPGSAFDSFLSSYN 252
C T+P + + V AV GS S SSY+
Sbjct: 160 TGKCLKTLPAHSDPVSAVHFNRDGSLIVS--SSYD 192
Score = 188 (71.2 bits), Expect = 9.1e-12, P = 9.1e-12
Identities = 37/128 (28%), Positives = 63/128 (49%)
Query: 524 PDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLR 583
P+ T GH + + SV+FSP + + ++S DK IKIW DG KT GH +
Sbjct: 33 PNYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISD 92
Query: 584 ASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDAL 643
++ + +VS D +K+W V +G+C+ T H + ++ ++ + +G D
Sbjct: 93 VAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDES 152
Query: 644 VNLWHDST 651
V +W T
Sbjct: 153 VRIWDVKT 160
Score = 166 (63.5 bits), Expect = 2.9e-09, P = 2.9e-09
Identities = 65/302 (21%), Positives = 123/302 (40%)
Query: 142 GHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGS 201
GH VSS+ F P+ + L S S D +++W K T+ H ++ +A +SD +
Sbjct: 43 GHTKAVSSVKFSPNGE--WLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSN 100
Query: 202 TLISAGRDKVVNLWDLRDYSCKLTVPTYEMVEAVCAIPPGS------AFDSFLSSYNQQT 255
L+SA DK + +WD+ C T+ + C P S +FD + ++ +T
Sbjct: 101 LLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKT 160
Query: 256 IKKKRRSLEIHFITVG------ERGIVRMWNADSACLYEQKSSDVTISFEMDDSKRGFTA 309
K ++L H V + ++ + D C +S + +DD +
Sbjct: 161 -GKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSF 219
Query: 310 ATVLPSNQGLLCVTADQQLLLYTTVEVPEKKMELILSKRLVGYNEE--ILDLKFLGEEEQ 367
P+ + +L T D L L+ K + + K G+ E + F +
Sbjct: 220 VKFSPNGKYILAATLDNTLKLWDY-----SKGKCL--KTYTGHKNEKYCIFANFSVTGGK 272
Query: 368 YLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWD 427
++ + V +++L + L GH+++V+ C + I D +++LW
Sbjct: 273 WIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVIST-ACHPTENIIASAALENDKTIKLWK 331
Query: 428 SE 429
S+
Sbjct: 332 SD 333
Score = 145 (56.1 bits), Expect = 6.5e-07, P = 6.5e-07
Identities = 67/307 (21%), Positives = 136/307 (44%)
Query: 183 TLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYEMVEAVCAIPPGS 242
TL H V+S+ + +G L S+ DK++ +W D + T+ +++ + + S
Sbjct: 40 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKL--GISDVAWSS 97
Query: 243 AFDSFLSSYNQQTIKKKRRSLEIHFITVGE--RGIVRMWNADSACLYEQKSSDVTISFEM 300
+ +S+ + +T+K I ++ G+ + + N C + +S+ + +S
Sbjct: 98 DSNLLVSASDDKTLK-------IWDVSSGKCLKTLKGHSNYVFCCNFNPQSN-LIVSGSF 149
Query: 301 DDSKRGFTAAT-----VLPSNQGLLCVT---ADQQLLLYTTVE----VPEKKMELILSKR 348
D+S R + T LP++ + D L++ ++ + + + L
Sbjct: 150 DESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTL 209
Query: 349 LVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCL-DTCAL 407
+ N + +KF +Y+ AT ++++D S C GH C+ ++
Sbjct: 210 IDDDNPPVSFVKF-SPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSV 268
Query: 408 SSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGS--SDHT 465
+ GK IV+GS+DN V +W+ +++ V GH V + A +N + S + +D T
Sbjct: 269 TGGK-WIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTA-CHPTENIIASAALENDKT 326
Query: 466 IKVWSFD 472
IK+W D
Sbjct: 327 IKLWKSD 333
>UNIPROTKB|F1S034 [details] [associations]
symbol:WDR5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071339 "MLL1 complex" evidence=IEA] [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IEA]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=IEA] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=IEA] [GO:0043966 "histone H3
acetylation" evidence=IEA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IEA] [GO:0005671
"Ada2/Gcn5/Ada3 transcription activator complex" evidence=IEA]
[GO:0001501 "skeletal system development" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0001501
GO:GO:0005671 GO:GO:0042800 GO:GO:0048188 GO:GO:0071339
GO:GO:0043966 GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 KO:K14963 OMA:KLWKSDT CTD:11091
EMBL:CU571409 RefSeq:XP_003353752.1 UniGene:Ssc.82589
Ensembl:ENSSSCT00000023586 GeneID:100156729 KEGG:ssc:100156729
Uniprot:F1S034
Length = 334
Score = 280 (103.6 bits), Expect = 1.5e-23, P = 1.5e-23
Identities = 83/314 (26%), Positives = 145/314 (46%)
Query: 340 KMELILSKRLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIV 399
K L L G+ + + +KF E +LA ++ + ++++ ++GH
Sbjct: 32 KPNYALKFTLAGHTKAVSSVKFSPNGE-WLASSSADKLIKIWGAYDGKFEKTISGHK--- 87
Query: 400 LCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVS 459
L + A SS L+V+ S D ++++WD S C+ GH V F+ + N +VS
Sbjct: 88 LGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQ-SNLIVS 146
Query: 460 GSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTAC 519
GS D ++++W D + LK + AH ++++ + SL+ + S D
Sbjct: 147 GSFDESVRIW-------DVKTGKCLKT---LPAHSDPVSAVHFNRDGSLIVSSSYDGLCR 196
Query: 520 VWRLPDLVSVVTFRGHKRGIWS-VEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHT 578
+W + T S V+FSP + ++ A+ D T+K+W S G CLKT+ GH
Sbjct: 197 IWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHK 256
Query: 579 SS--VLRASF-LTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMF 635
+ + A+F +T G IVS D LV +W ++T E + H D + + A +
Sbjct: 257 NEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENII 316
Query: 636 ATGG--SDALVNLW 647
A+ +D + LW
Sbjct: 317 ASAALENDKTIKLW 330
Score = 255 (94.8 bits), Expect = 7.3e-21, P = 7.3e-21
Identities = 54/178 (30%), Positives = 91/178 (51%)
Query: 49 NASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGM 108
N ++K T+ G + ++++ SP+ + L SS + I++W K ++ GH +
Sbjct: 34 NYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDV 93
Query: 109 ACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDA 168
A LL +A D+ + +WDV G C KGH V F+P ++ L+ SGS D
Sbjct: 94 AWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSN--LIVSGSFDE 151
Query: 169 TVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTV 226
+VR+WD+ KC+ TL H V+++ DGS ++S+ D + +WD C T+
Sbjct: 152 SVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTL 209
Score = 255 (94.8 bits), Expect = 7.3e-21, P = 7.3e-21
Identities = 59/200 (29%), Positives = 97/200 (48%)
Query: 28 SSDGSFIACACGES-INIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRV 86
S +G ++A + + I I + + TI G I+ +A S D LL S+ + +++
Sbjct: 54 SPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKI 113
Query: 87 WDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGV 146
WD+S+ KCL++ KGH +P L+ + D V +WDV G C H
Sbjct: 114 WDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDP 173
Query: 147 VSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATL-DKHFSRVTSMAITSDGSTLIS 205
VS++ H + D SL+ S S D R+WD + +C+ TL D V+ + + +G +++
Sbjct: 174 VSAV--HFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILA 231
Query: 206 AGRDKVVNLWDLRDYSCKLT 225
A D + LWD C T
Sbjct: 232 ATLDNTLKLWDYSKGKCLKT 251
Score = 216 (81.1 bits), Expect = 4.7e-15, P = 4.7e-15
Identities = 59/238 (24%), Positives = 108/238 (45%)
Query: 28 SSDGSFIACACGE-SINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRV 86
SSD + + A + ++ I D+S+ T++G S+ + +P L+ S +R+
Sbjct: 96 SSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRI 155
Query: 87 WDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTH-YFKGHKG 145
WD+ T KCL++ H P + + G L+ ++ D +WD G C
Sbjct: 156 WDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNP 215
Query: 146 VVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKH----FSRVTSMAITSDGS 201
VS + F P+ K +L + D+ T+++WD KC+ T H + + ++T G
Sbjct: 216 PVSFVKFSPN-GKYILAATLDN-TLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTG-GK 272
Query: 202 TLISAGRDKVVNLWDL--RDYSCKLTVPTYEMVEAVCAIPPGSAFDSFLSSYNQQTIK 257
++S D +V +W+L ++ KL T ++ C P + + N +TIK
Sbjct: 273 WIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACH--PTENIIASAALENDKTIK 328
Score = 212 (79.7 bits), Expect = 1.4e-14, P = 1.4e-14
Identities = 58/195 (29%), Positives = 89/195 (45%)
Query: 25 LVVSSDGSFIACACGESINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREI 84
L+VS GSF ES+ I D+ T+ SD ++A+ + D L+ SS +
Sbjct: 143 LIVS--GSF-----DESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLC 195
Query: 85 RVWDLSTLKCLRSWKGHDGPAIGMA-CHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGH 143
R+WD ++ +CL++ D P + P+G + A D + +WD G C + GH
Sbjct: 196 RIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGH 255
Query: 144 KGVVSSILFHPD-TDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGST 202
K I + T + SGS+D V +W+L K+ V L H V S A +
Sbjct: 256 KNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENI 315
Query: 203 LISAG--RDKVVNLW 215
+ SA DK + LW
Sbjct: 316 IASAALENDKTIKLW 330
Score = 196 (74.1 bits), Expect = 1.1e-12, P = 1.1e-12
Identities = 49/155 (31%), Positives = 79/155 (50%)
Query: 100 GHDGPAIGMACHPSGGLLATAGADRKVLVWDV-DGGFCTHYFKGHKGVVSSILFHPDTDK 158
GH + P+G LA++ AD+ + +W DG F GHK +S + + +D
Sbjct: 43 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKF-EKTISGHKLGISDVAW--SSDS 99
Query: 159 SLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLR 218
+LL S SDD T+++WD+ + KC+ TL H + V + ++S D+ V +WD++
Sbjct: 100 NLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVK 159
Query: 219 DYSCKLTVPTY-EMVEAVCAIPPGSAFDSFLSSYN 252
C T+P + + V AV GS S SSY+
Sbjct: 160 TGKCLKTLPAHSDPVSAVHFNRDGSLIVS--SSYD 192
Score = 188 (71.2 bits), Expect = 9.1e-12, P = 9.1e-12
Identities = 37/128 (28%), Positives = 63/128 (49%)
Query: 524 PDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLR 583
P+ T GH + + SV+FSP + + ++S DK IKIW DG KT GH +
Sbjct: 33 PNYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISD 92
Query: 584 ASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDAL 643
++ + +VS D +K+W V +G+C+ T H + ++ ++ + +G D
Sbjct: 93 VAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDES 152
Query: 644 VNLWHDST 651
V +W T
Sbjct: 153 VRIWDVKT 160
Score = 166 (63.5 bits), Expect = 2.9e-09, P = 2.9e-09
Identities = 65/302 (21%), Positives = 123/302 (40%)
Query: 142 GHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGS 201
GH VSS+ F P+ + L S S D +++W K T+ H ++ +A +SD +
Sbjct: 43 GHTKAVSSVKFSPNGE--WLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSN 100
Query: 202 TLISAGRDKVVNLWDLRDYSCKLTVPTYEMVEAVCAIPPGS------AFDSFLSSYNQQT 255
L+SA DK + +WD+ C T+ + C P S +FD + ++ +T
Sbjct: 101 LLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKT 160
Query: 256 IKKKRRSLEIHFITVG------ERGIVRMWNADSACLYEQKSSDVTISFEMDDSKRGFTA 309
K ++L H V + ++ + D C +S + +DD +
Sbjct: 161 -GKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSF 219
Query: 310 ATVLPSNQGLLCVTADQQLLLYTTVEVPEKKMELILSKRLVGYNEE--ILDLKFLGEEEQ 367
P+ + +L T D L L+ K + + K G+ E + F +
Sbjct: 220 VKFSPNGKYILAATLDNTLKLWDY-----SKGKCL--KTYTGHKNEKYCIFANFSVTGGK 272
Query: 368 YLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWD 427
++ + V +++L + L GH+++V+ C + I D +++LW
Sbjct: 273 WIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVIST-ACHPTENIIASAALENDKTIKLWK 331
Query: 428 SE 429
S+
Sbjct: 332 SD 333
Score = 145 (56.1 bits), Expect = 6.5e-07, P = 6.5e-07
Identities = 67/307 (21%), Positives = 136/307 (44%)
Query: 183 TLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYEMVEAVCAIPPGS 242
TL H V+S+ + +G L S+ DK++ +W D + T+ +++ + + S
Sbjct: 40 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKL--GISDVAWSS 97
Query: 243 AFDSFLSSYNQQTIKKKRRSLEIHFITVGE--RGIVRMWNADSACLYEQKSSDVTISFEM 300
+ +S+ + +T+K I ++ G+ + + N C + +S+ + +S
Sbjct: 98 DSNLLVSASDDKTLK-------IWDVSSGKCLKTLKGHSNYVFCCNFNPQSN-LIVSGSF 149
Query: 301 DDSKRGFTAAT-----VLPSNQGLLCVT---ADQQLLLYTTVE----VPEKKMELILSKR 348
D+S R + T LP++ + D L++ ++ + + + L
Sbjct: 150 DESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTL 209
Query: 349 LVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCL-DTCAL 407
+ N + +KF +Y+ AT ++++D S C GH C+ ++
Sbjct: 210 IDDDNPPVSFVKF-SPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSV 268
Query: 408 SSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGS--SDHT 465
+ GK IV+GS+DN V +W+ +++ V GH V + A +N + S + +D T
Sbjct: 269 TGGK-WIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTA-CHPTENIIASAALENDKT 326
Query: 466 IKVWSFD 472
IK+W D
Sbjct: 327 IKLWKSD 333
>MGI|MGI:2155884 [details] [associations]
symbol:Wdr5 "WD repeat domain 5" species:10090 "Mus
musculus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISO] [GO:0001501 "skeletal system development"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005622 "intracellular" evidence=IDA] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005671 "Ada2/Gcn5/Ada3 transcription
activator complex" evidence=ISO;IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0035097 "histone methyltransferase
complex" evidence=ISO] [GO:0043966 "histone H3 acetylation"
evidence=ISO] [GO:0043981 "histone H4-K5 acetylation" evidence=ISO]
[GO:0043982 "histone H4-K8 acetylation" evidence=ISO] [GO:0043984
"histone H4-K16 acetylation" evidence=ISO] [GO:0048188
"Set1C/COMPASS complex" evidence=ISO] [GO:0051568 "histone H3-K4
methylation" evidence=ISO] [GO:0071339 "MLL1 complex" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:2155884 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0035064 GO:GO:0042800 GO:GO:0048188
GO:GO:0051568 GO:GO:0071339 GO:GO:0043966 GO:GO:0035097
GO:GO:0000123 GO:GO:0043981 GO:GO:0043982 GO:GO:0043984
GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 PDB:2XL2 PDB:2XL3 PDBsum:2XL2
PDBsum:2XL3 KO:K14963 HOGENOM:HOG000091642 OMA:KLWKSDT
HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF EMBL:AF416510
EMBL:AK075937 EMBL:BC008547 EMBL:BC016103 EMBL:BC025801
IPI:IPI00139957 RefSeq:NP_543124.1 UniGene:Mm.28265
ProteinModelPortal:P61965 SMR:P61965 IntAct:P61965 STRING:P61965
PhosphoSite:P61965 PaxDb:P61965 PRIDE:P61965
Ensembl:ENSMUST00000113952 GeneID:140858 KEGG:mmu:140858
BindingDB:P61965 EvolutionaryTrace:P61965 NextBio:370017
Bgee:P61965 CleanEx:MM_WDR5 Genevestigator:P61965
GermOnline:ENSMUSG00000026917 Uniprot:P61965
Length = 334
Score = 280 (103.6 bits), Expect = 1.5e-23, P = 1.5e-23
Identities = 83/314 (26%), Positives = 145/314 (46%)
Query: 340 KMELILSKRLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIV 399
K L L G+ + + +KF E +LA ++ + ++++ ++GH
Sbjct: 32 KPNYALKFTLAGHTKAVSSVKFSPNGE-WLASSSADKLIKIWGAYDGKFEKTISGHK--- 87
Query: 400 LCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVS 459
L + A SS L+V+ S D ++++WD S C+ GH V F+ + N +VS
Sbjct: 88 LGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQ-SNLIVS 146
Query: 460 GSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTAC 519
GS D ++++W D + LK + AH ++++ + SL+ + S D
Sbjct: 147 GSFDESVRIW-------DVKTGKCLKT---LPAHSDPVSAVHFNRDGSLIVSSSYDGLCR 196
Query: 520 VWRLPDLVSVVTFRGHKRGIWS-VEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHT 578
+W + T S V+FSP + ++ A+ D T+K+W S G CLKT+ GH
Sbjct: 197 IWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHK 256
Query: 579 SS--VLRASF-LTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMF 635
+ + A+F +T G IVS D LV +W ++T E + H D + + A +
Sbjct: 257 NEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENII 316
Query: 636 ATGG--SDALVNLW 647
A+ +D + LW
Sbjct: 317 ASAALENDKTIKLW 330
Score = 255 (94.8 bits), Expect = 7.3e-21, P = 7.3e-21
Identities = 54/178 (30%), Positives = 91/178 (51%)
Query: 49 NASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGM 108
N ++K T+ G + ++++ SP+ + L SS + I++W K ++ GH +
Sbjct: 34 NYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDV 93
Query: 109 ACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDA 168
A LL +A D+ + +WDV G C KGH V F+P ++ L+ SGS D
Sbjct: 94 AWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSN--LIVSGSFDE 151
Query: 169 TVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTV 226
+VR+WD+ KC+ TL H V+++ DGS ++S+ D + +WD C T+
Sbjct: 152 SVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTL 209
Score = 255 (94.8 bits), Expect = 7.3e-21, P = 7.3e-21
Identities = 59/200 (29%), Positives = 97/200 (48%)
Query: 28 SSDGSFIACACGES-INIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRV 86
S +G ++A + + I I + + TI G I+ +A S D LL S+ + +++
Sbjct: 54 SPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKI 113
Query: 87 WDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGV 146
WD+S+ KCL++ KGH +P L+ + D V +WDV G C H
Sbjct: 114 WDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDP 173
Query: 147 VSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATL-DKHFSRVTSMAITSDGSTLIS 205
VS++ H + D SL+ S S D R+WD + +C+ TL D V+ + + +G +++
Sbjct: 174 VSAV--HFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILA 231
Query: 206 AGRDKVVNLWDLRDYSCKLT 225
A D + LWD C T
Sbjct: 232 ATLDNTLKLWDYSKGKCLKT 251
Score = 216 (81.1 bits), Expect = 4.7e-15, P = 4.7e-15
Identities = 59/238 (24%), Positives = 108/238 (45%)
Query: 28 SSDGSFIACACGE-SINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRV 86
SSD + + A + ++ I D+S+ T++G S+ + +P L+ S +R+
Sbjct: 96 SSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRI 155
Query: 87 WDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTH-YFKGHKG 145
WD+ T KCL++ H P + + G L+ ++ D +WD G C
Sbjct: 156 WDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNP 215
Query: 146 VVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKH----FSRVTSMAITSDGS 201
VS + F P+ K +L + D+ T+++WD KC+ T H + + ++T G
Sbjct: 216 PVSFVKFSPN-GKYILAATLDN-TLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTG-GK 272
Query: 202 TLISAGRDKVVNLWDL--RDYSCKLTVPTYEMVEAVCAIPPGSAFDSFLSSYNQQTIK 257
++S D +V +W+L ++ KL T ++ C P + + N +TIK
Sbjct: 273 WIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACH--PTENIIASAALENDKTIK 328
Score = 212 (79.7 bits), Expect = 1.4e-14, P = 1.4e-14
Identities = 58/195 (29%), Positives = 89/195 (45%)
Query: 25 LVVSSDGSFIACACGESINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREI 84
L+VS GSF ES+ I D+ T+ SD ++A+ + D L+ SS +
Sbjct: 143 LIVS--GSF-----DESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLC 195
Query: 85 RVWDLSTLKCLRSWKGHDGPAIGMA-CHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGH 143
R+WD ++ +CL++ D P + P+G + A D + +WD G C + GH
Sbjct: 196 RIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGH 255
Query: 144 KGVVSSILFHPD-TDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGST 202
K I + T + SGS+D V +W+L K+ V L H V S A +
Sbjct: 256 KNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENI 315
Query: 203 LISAG--RDKVVNLW 215
+ SA DK + LW
Sbjct: 316 IASAALENDKTIKLW 330
Score = 196 (74.1 bits), Expect = 1.1e-12, P = 1.1e-12
Identities = 49/155 (31%), Positives = 79/155 (50%)
Query: 100 GHDGPAIGMACHPSGGLLATAGADRKVLVWDV-DGGFCTHYFKGHKGVVSSILFHPDTDK 158
GH + P+G LA++ AD+ + +W DG F GHK +S + + +D
Sbjct: 43 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKF-EKTISGHKLGISDVAW--SSDS 99
Query: 159 SLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLR 218
+LL S SDD T+++WD+ + KC+ TL H + V + ++S D+ V +WD++
Sbjct: 100 NLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVK 159
Query: 219 DYSCKLTVPTY-EMVEAVCAIPPGSAFDSFLSSYN 252
C T+P + + V AV GS S SSY+
Sbjct: 160 TGKCLKTLPAHSDPVSAVHFNRDGSLIVS--SSYD 192
Score = 188 (71.2 bits), Expect = 9.1e-12, P = 9.1e-12
Identities = 37/128 (28%), Positives = 63/128 (49%)
Query: 524 PDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLR 583
P+ T GH + + SV+FSP + + ++S DK IKIW DG KT GH +
Sbjct: 33 PNYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISD 92
Query: 584 ASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDAL 643
++ + +VS D +K+W V +G+C+ T H + ++ ++ + +G D
Sbjct: 93 VAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDES 152
Query: 644 VNLWHDST 651
V +W T
Sbjct: 153 VRIWDVKT 160
Score = 166 (63.5 bits), Expect = 2.9e-09, P = 2.9e-09
Identities = 65/302 (21%), Positives = 123/302 (40%)
Query: 142 GHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGS 201
GH VSS+ F P+ + L S S D +++W K T+ H ++ +A +SD +
Sbjct: 43 GHTKAVSSVKFSPNGE--WLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSN 100
Query: 202 TLISAGRDKVVNLWDLRDYSCKLTVPTYEMVEAVCAIPPGS------AFDSFLSSYNQQT 255
L+SA DK + +WD+ C T+ + C P S +FD + ++ +T
Sbjct: 101 LLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKT 160
Query: 256 IKKKRRSLEIHFITVG------ERGIVRMWNADSACLYEQKSSDVTISFEMDDSKRGFTA 309
K ++L H V + ++ + D C +S + +DD +
Sbjct: 161 -GKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSF 219
Query: 310 ATVLPSNQGLLCVTADQQLLLYTTVEVPEKKMELILSKRLVGYNEE--ILDLKFLGEEEQ 367
P+ + +L T D L L+ K + + K G+ E + F +
Sbjct: 220 VKFSPNGKYILAATLDNTLKLWDY-----SKGKCL--KTYTGHKNEKYCIFANFSVTGGK 272
Query: 368 YLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWD 427
++ + V +++L + L GH+++V+ C + I D +++LW
Sbjct: 273 WIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVIST-ACHPTENIIASAALENDKTIKLWK 331
Query: 428 SE 429
S+
Sbjct: 332 SD 333
Score = 145 (56.1 bits), Expect = 6.5e-07, P = 6.5e-07
Identities = 67/307 (21%), Positives = 136/307 (44%)
Query: 183 TLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYEMVEAVCAIPPGS 242
TL H V+S+ + +G L S+ DK++ +W D + T+ +++ + + S
Sbjct: 40 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKL--GISDVAWSS 97
Query: 243 AFDSFLSSYNQQTIKKKRRSLEIHFITVGE--RGIVRMWNADSACLYEQKSSDVTISFEM 300
+ +S+ + +T+K I ++ G+ + + N C + +S+ + +S
Sbjct: 98 DSNLLVSASDDKTLK-------IWDVSSGKCLKTLKGHSNYVFCCNFNPQSN-LIVSGSF 149
Query: 301 DDSKRGFTAAT-----VLPSNQGLLCVT---ADQQLLLYTTVE----VPEKKMELILSKR 348
D+S R + T LP++ + D L++ ++ + + + L
Sbjct: 150 DESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTL 209
Query: 349 LVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCL-DTCAL 407
+ N + +KF +Y+ AT ++++D S C GH C+ ++
Sbjct: 210 IDDDNPPVSFVKF-SPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSV 268
Query: 408 SSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGS--SDHT 465
+ GK IV+GS+DN V +W+ +++ V GH V + A +N + S + +D T
Sbjct: 269 TGGK-WIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTA-CHPTENIIASAALENDKT 326
Query: 466 IKVWSFD 472
IK+W D
Sbjct: 327 IKLWKSD 333
>RGD|1305159 [details] [associations]
symbol:Wdr5 "WD repeat domain 5" species:10116 "Rattus
norvegicus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISO;ISS] [GO:0001501 "skeletal system development"
evidence=IEA;ISO] [GO:0005622 "intracellular" evidence=ISO]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005671 "Ada2/Gcn5/Ada3
transcription activator complex" evidence=IEA;ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0034968 "histone lysine methylation" evidence=ISS] [GO:0035064
"methylated histone residue binding" evidence=ISS] [GO:0035097
"histone methyltransferase complex" evidence=ISO;ISS] [GO:0042800
"histone methyltransferase activity (H3-K4 specific)"
evidence=IEA;ISO] [GO:0043966 "histone H3 acetylation"
evidence=IEA;ISO] [GO:0043981 "histone H4-K5 acetylation"
evidence=ISO;ISS] [GO:0043982 "histone H4-K8 acetylation"
evidence=ISO;ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISO;ISS] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=ISO;ISS] [GO:0043996 "histone
acetyltransferase activity (H4-K8 specific)" evidence=ISO;ISS]
[GO:0046972 "histone acetyltransferase activity (H4-K16 specific)"
evidence=ISO;ISS] [GO:0048188 "Set1C/COMPASS complex"
evidence=ISO;ISS] [GO:0051568 "histone H3-K4 methylation"
evidence=ISO;ISS] [GO:0071339 "MLL1 complex" evidence=ISO;ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1305159 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0035064 GO:GO:0042800 GO:GO:0048188
GO:GO:0051568 GO:GO:0071339 GO:GO:0043966 GO:GO:0000123
GO:GO:0043981 GO:GO:0043982 GO:GO:0043984 GO:GO:0046972
GO:GO:0043995 GO:GO:0043996 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
OMA:KLWKSDT HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF
EMBL:BC100156 IPI:IPI00373481 RefSeq:NP_001034123.1
UniGene:Rn.106818 ProteinModelPortal:Q498M4 SMR:Q498M4
IntAct:Q498M4 STRING:Q498M4 PRIDE:Q498M4 Ensembl:ENSRNOT00000011556
GeneID:362093 KEGG:rno:362093 UCSC:RGD:1305159 InParanoid:Q498M4
BindingDB:Q498M4 NextBio:678628 Genevestigator:Q498M4
Uniprot:Q498M4
Length = 334
Score = 280 (103.6 bits), Expect = 1.5e-23, P = 1.5e-23
Identities = 83/314 (26%), Positives = 145/314 (46%)
Query: 340 KMELILSKRLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIV 399
K L L G+ + + +KF E +LA ++ + ++++ ++GH
Sbjct: 32 KPNYALKFTLAGHTKAVSSVKFSPNGE-WLASSSADKLIKIWGAYDGKFEKTISGHK--- 87
Query: 400 LCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVS 459
L + A SS L+V+ S D ++++WD S C+ GH V F+ + N +VS
Sbjct: 88 LGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQ-SNLIVS 146
Query: 460 GSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTAC 519
GS D ++++W D + LK + AH ++++ + SL+ + S D
Sbjct: 147 GSFDESVRIW-------DVKTGKCLKT---LPAHSDPVSAVHFNRDGSLIVSSSYDGLCR 196
Query: 520 VWRLPDLVSVVTFRGHKRGIWS-VEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHT 578
+W + T S V+FSP + ++ A+ D T+K+W S G CLKT+ GH
Sbjct: 197 IWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHK 256
Query: 579 SS--VLRASF-LTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMF 635
+ + A+F +T G IVS D LV +W ++T E + H D + + A +
Sbjct: 257 NEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENII 316
Query: 636 ATGG--SDALVNLW 647
A+ +D + LW
Sbjct: 317 ASAALENDKTIKLW 330
Score = 255 (94.8 bits), Expect = 7.3e-21, P = 7.3e-21
Identities = 54/178 (30%), Positives = 91/178 (51%)
Query: 49 NASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGM 108
N ++K T+ G + ++++ SP+ + L SS + I++W K ++ GH +
Sbjct: 34 NYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDV 93
Query: 109 ACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDA 168
A LL +A D+ + +WDV G C KGH V F+P ++ L+ SGS D
Sbjct: 94 AWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSN--LIVSGSFDE 151
Query: 169 TVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTV 226
+VR+WD+ KC+ TL H V+++ DGS ++S+ D + +WD C T+
Sbjct: 152 SVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTL 209
Score = 255 (94.8 bits), Expect = 7.3e-21, P = 7.3e-21
Identities = 59/200 (29%), Positives = 97/200 (48%)
Query: 28 SSDGSFIACACGES-INIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRV 86
S +G ++A + + I I + + TI G I+ +A S D LL S+ + +++
Sbjct: 54 SPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKI 113
Query: 87 WDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGV 146
WD+S+ KCL++ KGH +P L+ + D V +WDV G C H
Sbjct: 114 WDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDP 173
Query: 147 VSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATL-DKHFSRVTSMAITSDGSTLIS 205
VS++ H + D SL+ S S D R+WD + +C+ TL D V+ + + +G +++
Sbjct: 174 VSAV--HFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILA 231
Query: 206 AGRDKVVNLWDLRDYSCKLT 225
A D + LWD C T
Sbjct: 232 ATLDNTLKLWDYSKGKCLKT 251
Score = 216 (81.1 bits), Expect = 4.7e-15, P = 4.7e-15
Identities = 59/238 (24%), Positives = 108/238 (45%)
Query: 28 SSDGSFIACACGE-SINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRV 86
SSD + + A + ++ I D+S+ T++G S+ + +P L+ S +R+
Sbjct: 96 SSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRI 155
Query: 87 WDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTH-YFKGHKG 145
WD+ T KCL++ H P + + G L+ ++ D +WD G C
Sbjct: 156 WDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNP 215
Query: 146 VVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKH----FSRVTSMAITSDGS 201
VS + F P+ K +L + D+ T+++WD KC+ T H + + ++T G
Sbjct: 216 PVSFVKFSPN-GKYILAATLDN-TLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTG-GK 272
Query: 202 TLISAGRDKVVNLWDL--RDYSCKLTVPTYEMVEAVCAIPPGSAFDSFLSSYNQQTIK 257
++S D +V +W+L ++ KL T ++ C P + + N +TIK
Sbjct: 273 WIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACH--PTENIIASAALENDKTIK 328
Score = 212 (79.7 bits), Expect = 1.4e-14, P = 1.4e-14
Identities = 58/195 (29%), Positives = 89/195 (45%)
Query: 25 LVVSSDGSFIACACGESINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREI 84
L+VS GSF ES+ I D+ T+ SD ++A+ + D L+ SS +
Sbjct: 143 LIVS--GSF-----DESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLC 195
Query: 85 RVWDLSTLKCLRSWKGHDGPAIGMA-CHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGH 143
R+WD ++ +CL++ D P + P+G + A D + +WD G C + GH
Sbjct: 196 RIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGH 255
Query: 144 KGVVSSILFHPD-TDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGST 202
K I + T + SGS+D V +W+L K+ V L H V S A +
Sbjct: 256 KNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENI 315
Query: 203 LISAG--RDKVVNLW 215
+ SA DK + LW
Sbjct: 316 IASAALENDKTIKLW 330
Score = 196 (74.1 bits), Expect = 1.1e-12, P = 1.1e-12
Identities = 49/155 (31%), Positives = 79/155 (50%)
Query: 100 GHDGPAIGMACHPSGGLLATAGADRKVLVWDV-DGGFCTHYFKGHKGVVSSILFHPDTDK 158
GH + P+G LA++ AD+ + +W DG F GHK +S + + +D
Sbjct: 43 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKF-EKTISGHKLGISDVAW--SSDS 99
Query: 159 SLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLR 218
+LL S SDD T+++WD+ + KC+ TL H + V + ++S D+ V +WD++
Sbjct: 100 NLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVK 159
Query: 219 DYSCKLTVPTY-EMVEAVCAIPPGSAFDSFLSSYN 252
C T+P + + V AV GS S SSY+
Sbjct: 160 TGKCLKTLPAHSDPVSAVHFNRDGSLIVS--SSYD 192
Score = 188 (71.2 bits), Expect = 9.1e-12, P = 9.1e-12
Identities = 37/128 (28%), Positives = 63/128 (49%)
Query: 524 PDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLR 583
P+ T GH + + SV+FSP + + ++S DK IKIW DG KT GH +
Sbjct: 33 PNYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISD 92
Query: 584 ASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDAL 643
++ + +VS D +K+W V +G+C+ T H + ++ ++ + +G D
Sbjct: 93 VAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDES 152
Query: 644 VNLWHDST 651
V +W T
Sbjct: 153 VRIWDVKT 160
Score = 166 (63.5 bits), Expect = 2.9e-09, P = 2.9e-09
Identities = 65/302 (21%), Positives = 123/302 (40%)
Query: 142 GHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGS 201
GH VSS+ F P+ + L S S D +++W K T+ H ++ +A +SD +
Sbjct: 43 GHTKAVSSVKFSPNGE--WLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSN 100
Query: 202 TLISAGRDKVVNLWDLRDYSCKLTVPTYEMVEAVCAIPPGS------AFDSFLSSYNQQT 255
L+SA DK + +WD+ C T+ + C P S +FD + ++ +T
Sbjct: 101 LLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKT 160
Query: 256 IKKKRRSLEIHFITVG------ERGIVRMWNADSACLYEQKSSDVTISFEMDDSKRGFTA 309
K ++L H V + ++ + D C +S + +DD +
Sbjct: 161 -GKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSF 219
Query: 310 ATVLPSNQGLLCVTADQQLLLYTTVEVPEKKMELILSKRLVGYNEE--ILDLKFLGEEEQ 367
P+ + +L T D L L+ K + + K G+ E + F +
Sbjct: 220 VKFSPNGKYILAATLDNTLKLWDY-----SKGKCL--KTYTGHKNEKYCIFANFSVTGGK 272
Query: 368 YLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWD 427
++ + V +++L + L GH+++V+ C + I D +++LW
Sbjct: 273 WIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVIST-ACHPTENIIASAALENDKTIKLWK 331
Query: 428 SE 429
S+
Sbjct: 332 SD 333
Score = 145 (56.1 bits), Expect = 6.5e-07, P = 6.5e-07
Identities = 67/307 (21%), Positives = 136/307 (44%)
Query: 183 TLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYEMVEAVCAIPPGS 242
TL H V+S+ + +G L S+ DK++ +W D + T+ +++ + + S
Sbjct: 40 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKL--GISDVAWSS 97
Query: 243 AFDSFLSSYNQQTIKKKRRSLEIHFITVGE--RGIVRMWNADSACLYEQKSSDVTISFEM 300
+ +S+ + +T+K I ++ G+ + + N C + +S+ + +S
Sbjct: 98 DSNLLVSASDDKTLK-------IWDVSSGKCLKTLKGHSNYVFCCNFNPQSN-LIVSGSF 149
Query: 301 DDSKRGFTAAT-----VLPSNQGLLCVT---ADQQLLLYTTVE----VPEKKMELILSKR 348
D+S R + T LP++ + D L++ ++ + + + L
Sbjct: 150 DESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTL 209
Query: 349 LVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCL-DTCAL 407
+ N + +KF +Y+ AT ++++D S C GH C+ ++
Sbjct: 210 IDDDNPPVSFVKF-SPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSV 268
Query: 408 SSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGS--SDHT 465
+ GK IV+GS+DN V +W+ +++ V GH V + A +N + S + +D T
Sbjct: 269 TGGK-WIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTA-CHPTENIIASAALENDKT 326
Query: 466 IKVWSFD 472
IK+W D
Sbjct: 327 IKLWKSD 333
>TAIR|locus:2176897 [details] [associations]
symbol:AT5G52820 "AT5G52820" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=ISS] [GO:0051604 "protein
maturation" evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:AB009055 HSSP:P16649
InterPro:IPR011044 SUPFAM:SSF50969 PRINTS:PR00319 GO:GO:0080008
EMBL:AK227330 EMBL:BT004562 IPI:IPI00528132 RefSeq:NP_200094.1
UniGene:At.29592 ProteinModelPortal:Q9FLX9 SMR:Q9FLX9 STRING:Q9FLX9
PaxDb:Q9FLX9 PRIDE:Q9FLX9 EnsemblPlants:AT5G52820.1 GeneID:835359
KEGG:ath:AT5G52820 GeneFarm:3344 TAIR:At5g52820
HOGENOM:HOG000091641 InParanoid:Q9FLX9 KO:K14855 OMA:HFTCKGH
PhylomeDB:Q9FLX9 ProtClustDB:CLSN2686131 Genevestigator:Q9FLX9
InterPro:IPR012972 Pfam:PF08154 Uniprot:Q9FLX9
Length = 473
Score = 217 (81.4 bits), Expect = 1.6e-14, P = 1.6e-14
Identities = 99/368 (26%), Positives = 167/368 (45%)
Query: 311 TVLPSNQG--LLCVTADQQ-LLLYTTVEVPEKKMELILSKRLVGY--NEEILDLKF-LGE 364
T++ +++G ++C+ D + L + + +P+K L L++ + + NEE+L F + +
Sbjct: 2 TMMDTDEGKTVMCLLTDPEGTHLGSAMYIPQKAGPLQLTQLVNRFLDNEEMLPYSFYVSD 61
Query: 365 EEQYLAVATNIEQ----VQ-----VYDLSSM-------SCSYVLAGHSEIVLCLDTCALS 408
EE + V T +E+ V+ VY ++ CS +AGH+E VLC+
Sbjct: 62 EELLVPVGTYLEKNKVSVEKVLTIVYQQQAVFRIRPVNRCSQTIAGHAEAVLCVSFSP-- 119
Query: 409 SGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKV 468
GK L +GS D +VRLWD + + GH V VA+S ++ LVSGS I
Sbjct: 120 DGKQL-ASGSGDTTVRLWDLYTETPLFTCKGHKNWVLTVAWSPDGKH-LVSGSKSGEICC 177
Query: 469 WSFDGLSDDAE-QPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLV 527
W+ + E P+ K + + ++ L+ +P V T S+D A +W +
Sbjct: 178 WN--PKKGELEGSPLTGHKKWITGISWEPVH-LS-SPCRRFV-TSSKDGDARIWDITLKK 232
Query: 528 SVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFL 587
S++ GH + V++ D ++ T S D TIK+W + G ++ +GH + +
Sbjct: 233 SIICLSGHTLAVTCVKWGG-DGIIYTGSQDCTIKMWETTQGKLIRELKGHGHWINSLALS 291
Query: 588 TRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKT-----EMFATGGSDA 642
T ++ GA TG Y +E+K AL KT E +G D
Sbjct: 292 TE--YVLRTGAFD-------HTGR---QYPPNEEKQKALERYNKTKGDSPERLVSGSDDF 339
Query: 643 LVNLWHDS 650
+ LW S
Sbjct: 340 TMFLWEPS 347
Score = 180 (68.4 bits), Expect = 1.9e-10, P = 1.9e-10
Identities = 42/132 (31%), Positives = 69/132 (52%)
Query: 86 VWDLSTLKCLRS-WKGHDGPAIGMACHPSGGLLATAGADRKVLVWD-VDGGFCTHYFKGH 143
+W+ S K + GH + P G +A+A D+ V +W+ + G F T F+GH
Sbjct: 343 LWEPSVSKQPKKRLTGHQQLVNHVYFSPDGKWIASASFDKSVRLWNGITGQFVT-VFRGH 401
Query: 144 KGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTL 203
G V + + D LL SGS D+T+++W++ KK L H V ++ + DG +
Sbjct: 402 VGPVYQVSW--SADSRLLLSGSKDSTLKIWEIRTKKLKQDLPGHADEVFAVDWSPDGEKV 459
Query: 204 ISAGRDKVVNLW 215
+S G+D+V+ LW
Sbjct: 460 VSGGKDRVLKLW 471
Score = 177 (67.4 bits), Expect = 1.7e-23, Sum P(2) = 1.7e-23
Identities = 48/189 (25%), Positives = 91/189 (48%)
Query: 461 SSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACV 520
S+++ ++ +FD + P N + + + + K +P + LV +GS D T +
Sbjct: 291 STEYVLRTGAFDHTG--RQYPPNEEKQKALERYNKTKGD---SP-ERLV-SGSDDFTMFL 343
Query: 521 WRLPDLVSVVTFR--GHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHT 578
W P + R GH++ + V FSP + + +AS DK++++W+ G + F GH
Sbjct: 344 WE-PSVSKQPKKRLTGHQQLVNHVYFSPDGKWIASASFDKSVRLWNGITGQFVTVFRGHV 402
Query: 579 SSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATG 638
V + S+ ++S D +K+W +RT + H D+++A+ E +G
Sbjct: 403 GPVYQVSWSADSRLLLSGSKDSTLKIWEIRTKKLKQDLPGHADEVFAVDWSPDGEKVVSG 462
Query: 639 GSDALVNLW 647
G D ++ LW
Sbjct: 463 GKDRVLKLW 471
Score = 174 (66.3 bits), Expect = 1.7e-23, Sum P(2) = 1.7e-23
Identities = 44/166 (26%), Positives = 73/166 (43%)
Query: 55 TIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPSG 114
TI G ++ + ++ SPD K L S +R+WDL T L + KGH + +A P G
Sbjct: 104 TIAGHAEAVLCVSFSPDGKQLASGSGDTTVRLWDLYTETPLFTCKGHKNWVLTVAWSPDG 163
Query: 115 GLLATAGADRKVLVWDVDGGFCTHY-FKGHKGVVSSILFHP---DTDKSLLFSGSDDATV 170
L + ++ W+ G GHK ++ I + P + + S D
Sbjct: 164 KHLVSGSKSGEICCWNPKKGELEGSPLTGHKKWITGISWEPVHLSSPCRRFVTSSKDGDA 223
Query: 171 RVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWD 216
R+WD+ KK + L H VT + DG + + +D + +W+
Sbjct: 224 RIWDITLKKSIICLSGHTLAVTCVKWGGDG-IIYTGSQDCTIKMWE 268
Score = 134 (52.2 bits), Expect = 2.5e-19, Sum P(2) = 2.5e-19
Identities = 44/179 (24%), Positives = 79/179 (44%)
Query: 28 SSDGSFIACACGES-INIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRV 86
S DG +A G++ + + DL + T +G + + +A SPD K L S S EI
Sbjct: 118 SPDGKQLASGSGDTTVRLWDLYTETPLFTCKGHKNWVLTVAWSPDGKHLVSGSKSGEICC 177
Query: 87 WDLSTLKCLRS-WKGHDGPAIGMACHP---SGGL--LATAGADRKVLVWDVDGGFCTHYF 140
W+ + S GH G++ P S T+ D +WD+
Sbjct: 178 WNPKKGELEGSPLTGHKKWITGISWEPVHLSSPCRRFVTSSKDGDARIWDITLKKSIICL 237
Query: 141 KGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSD 199
GH V+ + + D ++++GS D T+++W+ K + L H + S+A++++
Sbjct: 238 SGHTLAVTCVKWGGD---GIIYTGSQDCTIKMWETTQGKLIRELKGHGHWINSLALSTE 293
Score = 128 (50.1 bits), Expect = 9.4e-05, P = 9.4e-05
Identities = 28/121 (23%), Positives = 56/121 (46%)
Query: 53 KSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHP 112
K + G + + SPD K + S+ + +R+W+ T + + ++GH GP ++
Sbjct: 353 KKRLTGHQQLVNHVYFSPDGKWIASASFDKSVRLWNGITGQFVTVFRGHVGPVYQVSWSA 412
Query: 113 SGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRV 172
LL + D + +W++ GH V ++ + PD +K + SG D +++
Sbjct: 413 DSRLLLSGSKDSTLKIWEIRTKKLKQDLPGHADEVFAVDWSPDGEK--VVSGGKDRVLKL 470
Query: 173 W 173
W
Sbjct: 471 W 471
Score = 126 (49.4 bits), Expect = 3.6e-18, Sum P(2) = 3.6e-18
Identities = 39/131 (29%), Positives = 61/131 (46%)
Query: 392 LAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSK 451
L GH ++V GK I + S D SVRLW+ + V V GH+G V V++S
Sbjct: 356 LTGHQQLVN--HVYFSPDGK-WIASASFDKSVRLWNGITGQFVTVFRGHVGPVYQVSWSA 412
Query: 452 KLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCT 511
L+SGS D T+K+W K K + H ++ ++ +P+ V +
Sbjct: 413 D-SRLLLSGSKDSTLKIWEI----------RTKKLKQDLPGHADEVFAVDWSPDGEKVVS 461
Query: 512 GSQDRTACVWR 522
G +DR +W+
Sbjct: 462 GGKDRVLKLWK 472
Score = 121 (47.7 bits), Expect = 1.2e-17, Sum P(2) = 1.2e-17
Identities = 48/196 (24%), Positives = 83/196 (42%)
Query: 457 LVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDR 516
+ +GS D TIK+W + + LK HG INSLA++ + ++ TG+ D
Sbjct: 255 IYTGSQDCTIKMWE----TTQGKLIRELKG------HGHWINSLALS-TEYVLRTGAFDH 303
Query: 517 TACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSIS-DGSCLKTFE 575
T + + R +K + SP + +++ S D T+ +W S K
Sbjct: 304 TGRQYPPNEEKQKALERYNK----TKGDSP--ERLVSGSDDFTMFLWEPSVSKQPKKRLT 357
Query: 576 GHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMF 635
GH V F G I S D V+LW TG+ + + H ++ ++ + +
Sbjct: 358 GHQQLVNHVYFSPDGKWIASASFDKSVRLWNGITGQFVTVFRGHVGPVYQVSWSADSRLL 417
Query: 636 ATGGSDALVNLWHDST 651
+G D+ + +W T
Sbjct: 418 LSGSKDSTLKIWEIRT 433
Score = 99 (39.9 bits), Expect = 1.1e-15, Sum P(2) = 1.1e-15
Identities = 31/131 (23%), Positives = 59/131 (45%)
Query: 93 KCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILF 152
+C ++ GH + ++ P G LA+ D V +WD+ KGHK V ++ +
Sbjct: 100 RCSQTIAGHAEAVLCVSFSPDGKQLASGSGDTTVRLWDLYTETPLFTCKGHKNWVLTVAW 159
Query: 153 HPDTDKSLLFSGSDDATVRVWDLLAKKCVAT-LDKHFSRVTSMA-----ITSDGSTLISA 206
PD K L+ SGS + W+ + + L H +T ++ ++S +++
Sbjct: 160 SPD-GKHLV-SGSKSGEICCWNPKKGELEGSPLTGHKKWITGISWEPVHLSSPCRRFVTS 217
Query: 207 GRDKVVNLWDL 217
+D +WD+
Sbjct: 218 SKDGDARIWDI 228
>UNIPROTKB|I3L3N5 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9606 "Homo sapiens" [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005874 InterPro:IPR017252
PANTHER:PTHR22847:SF51 HGNC:HGNC:8574 ChiTaRS:PAFAH1B1
EMBL:AC015799 EMBL:AC005696 Ensembl:ENST00000574468 Bgee:I3L3N5
Uniprot:I3L3N5
Length = 208
Score = 199 (75.1 bits), Expect = 2.0e-23, Sum P(2) = 2.0e-23
Identities = 37/104 (35%), Positives = 60/104 (57%)
Query: 84 IRVWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGH 143
I++WD +C+R+ GHD +A P+G + +A D+ + +W+V G+C F GH
Sbjct: 6 IKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGH 65
Query: 144 KGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKH 187
+ V + P+ D +L+ S S+D TVRVW + K+C A L +H
Sbjct: 66 REWVRMV--RPNQDGTLIASCSNDQTVRVWVVATKECKAELREH 107
Score = 191 (72.3 bits), Expect = 5.5e-14, P = 5.5e-14
Identities = 45/130 (34%), Positives = 59/130 (45%)
Query: 513 SQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLK 572
S D T +W + T GH + SV P +++AS DKTIK+W + G C+K
Sbjct: 1 SADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVK 60
Query: 573 TFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKI----WALAV 628
TF GH V G I SC D V++W V T EC A +HE + WA
Sbjct: 61 TFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPES 120
Query: 629 GKKTEMFATG 638
+ ATG
Sbjct: 121 SYSSISEATG 130
Score = 160 (61.4 bits), Expect = 1.2e-10, P = 1.2e-10
Identities = 28/93 (30%), Positives = 47/93 (50%)
Query: 555 SGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIA 614
S D TIK+W C++T GH +V + + G IVS D +K+W V+TG C+
Sbjct: 1 SADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVK 60
Query: 615 TYDKHEDKIWALAVGKKTEMFATGGSDALVNLW 647
T+ H + + + + + A+ +D V +W
Sbjct: 61 TFTGHREWVRMVRPNQDGTLIASCSNDQTVRVW 93
Score = 159 (61.0 bits), Expect = 3.7e-19, Sum P(2) = 3.7e-19
Identities = 36/125 (28%), Positives = 57/125 (45%)
Query: 122 ADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCV 181
AD + +WD G C GH VSS+ P+ D + S S D T+++W++ CV
Sbjct: 2 ADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDH--IVSASRDKTIKMWEVQTGYCV 59
Query: 182 ATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYEMVEAVCAIPPG 241
T H V + DG+ + S D+ V +W + CK + +E V + P
Sbjct: 60 KTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPE 119
Query: 242 SAFDS 246
S++ S
Sbjct: 120 SSYSS 124
Score = 146 (56.5 bits), Expect = 3.7e-08, P = 3.7e-08
Identities = 43/195 (22%), Positives = 84/195 (43%)
Query: 25 LVVSSDGSFIACACGE-SINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSRE 83
+ + +G I A + +I + ++ T G + + + + D L+ S + +
Sbjct: 30 VAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQT 89
Query: 84 IRVWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGH 143
+RVW ++T +C + H+ ++ P + + A + GH
Sbjct: 90 VRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSEV--------------GH 135
Query: 144 KGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTL 203
V +LFH + + S +DD T+RVWD K+C+ TL+ H VTS+ +
Sbjct: 136 DNWVRGVLFH--SGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYV 193
Query: 204 ISAGRDKVVNLWDLR 218
++ D+ V +W+ R
Sbjct: 194 VTGSVDQTVKVWECR 208
Score = 140 (54.3 bits), Expect = 2.9e-07, P = 2.9e-07
Identities = 30/117 (25%), Positives = 58/117 (49%)
Query: 461 SSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACV 520
S+D TIK+W F G + + M+ H +++S+A+ PN + + S+D+T +
Sbjct: 1 SADMTIKLWDFQGF--ECIRTMH--------GHDHNVSSVAIMPNGDHIVSASRDKTIKM 50
Query: 521 WRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGH 577
W + V TF GH+ + V + ++ + S D+T+++W ++ C H
Sbjct: 51 WEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREH 107
Score = 134 (52.2 bits), Expect = 5.0e-14, Sum P(2) = 5.0e-14
Identities = 28/93 (30%), Positives = 48/93 (51%)
Query: 165 SDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKL 224
S D T+++WD +C+ T+ H V+S+AI +G ++SA RDK + +W+++ C
Sbjct: 1 SADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVK 60
Query: 225 TVPTYEMVEAVCAIPPGSAFDSFLSSYNQQTIK 257
T + E V + P S N QT++
Sbjct: 61 TFTGHR--EWVRMVRPNQDGTLIASCSNDQTVR 91
Score = 109 (43.4 bits), Expect = 5.0e-14, Sum P(2) = 5.0e-14
Identities = 36/148 (24%), Positives = 61/148 (41%)
Query: 502 VAPND--SLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKT 559
V PN +L+ + S D+T VW + R H+ + + ++P
Sbjct: 72 VRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYS-------- 123
Query: 560 IKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKH 619
SIS+ + + GH + V F + G I+SC D +++W + C+ T + H
Sbjct: 124 ----SISEATGSEV--GHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAH 177
Query: 620 EDKIWALAVGKKTEMFATGGSDALVNLW 647
E + +L K TG D V +W
Sbjct: 178 EHFVTSLDFHKTAPYVVTGSVDQTVKVW 205
Score = 106 (42.4 bits), Expect = 2.0e-23, Sum P(2) = 2.0e-23
Identities = 20/75 (26%), Positives = 34/75 (45%)
Query: 534 GHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQI 593
GH + V F + +++ + DKT+++W + C+KT H V F +
Sbjct: 134 GHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYV 193
Query: 594 VSCGADGLVKLWTVR 608
V+ D VK+W R
Sbjct: 194 VTGSVDQTVKVWECR 208
Score = 105 (42.0 bits), Expect = 6.8e-10, Sum P(2) = 6.8e-10
Identities = 24/92 (26%), Positives = 46/92 (50%)
Query: 378 VQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVG 437
++++D C + GH V + A+ IV+ S+D ++++W+ ++ CV
Sbjct: 6 IKLWDFQGFECIRTMHGHDHNV---SSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTF 62
Query: 438 TGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVW 469
TGH V V ++ + S S+D T++VW
Sbjct: 63 TGHREWVRMVRPNQD-GTLIASCSNDQTVRVW 93
Score = 96 (38.9 bits), Expect = 2.2e-22, Sum P(2) = 2.2e-22
Identities = 21/62 (33%), Positives = 37/62 (59%)
Query: 408 SSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIK 467
S GK I++ + D ++R+WD +++ C+ H V ++ F K ++V+GS D T+K
Sbjct: 146 SGGKF-ILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAP-YVVTGSVDQTVK 203
Query: 468 VW 469
VW
Sbjct: 204 VW 205
Score = 93 (37.8 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 30/129 (23%), Positives = 56/129 (43%)
Query: 418 SKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDD 477
S D +++LWD + C+ GH V +VA + +VS S D TIK+W +
Sbjct: 1 SADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPN-GDHIVSASRDKTIKMW-------E 52
Query: 478 AEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKR 537
+ +K H + + + + +L+ + S D+T VW + R H+
Sbjct: 53 VQTGYCVKT---FTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEH 109
Query: 538 GIWSVEFSP 546
+ + ++P
Sbjct: 110 VVECISWAP 118
Score = 82 (33.9 bits), Expect = 6.3e-21, Sum P(2) = 6.3e-21
Identities = 16/71 (22%), Positives = 32/71 (45%)
Query: 493 HGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVI 552
H + + + + + D+T VW + + T H+ + S++F V+
Sbjct: 135 HDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVV 194
Query: 553 TASGDKTIKIW 563
T S D+T+K+W
Sbjct: 195 TGSVDQTVKVW 205
Score = 72 (30.4 bits), Expect = 7.0e-20, Sum P(2) = 7.0e-20
Identities = 25/87 (28%), Positives = 35/87 (40%)
Query: 435 GVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHG 494
G GH V V F F++S + D T++VW + N + + AH
Sbjct: 130 GSEVGHDNWVRGVLFHSG-GKFILSCADDKTLRVWDYK----------NKRCMKTLNAHE 178
Query: 495 KDINSLAVAPNDSLVCTGSQDRTACVW 521
+ SL V TGS D+T VW
Sbjct: 179 HFVTSLDFHKTAPYVVTGSVDQTVKVW 205
Score = 55 (24.4 bits), Expect = 9.2e-05, Sum P(2) = 9.2e-05
Identities = 17/100 (17%), Positives = 45/100 (45%)
Query: 351 GYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSG 410
G++ + + + + ++ A+ + ++++++ + C GH E V + +
Sbjct: 22 GHDHNVSSVAIMPNGD-HIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRP---NQD 77
Query: 411 KILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFS 450
LI + S D +VR+W ++ C H V ++++
Sbjct: 78 GTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWA 117
>UNIPROTKB|B4DF38 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9606 "Homo sapiens" [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 GO:GO:0051301
GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006810 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016787 GO:GO:0005874 HOGENOM:HOG000184015 InterPro:IPR017252
PANTHER:PTHR22847:SF51 UniGene:Hs.77318 HGNC:HGNC:8574
ChiTaRS:PAFAH1B1 EMBL:AC015799 EMBL:AC005696 EMBL:AK293918
IPI:IPI00909586 SMR:B4DF38 STRING:B4DF38 Ensembl:ENST00000451360
UCSC:uc010vqz.2 HOVERGEN:HBG103859 Uniprot:B4DF38
Length = 205
Score = 199 (75.1 bits), Expect = 2.0e-23, Sum P(2) = 2.0e-23
Identities = 37/104 (35%), Positives = 60/104 (57%)
Query: 84 IRVWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGH 143
I++WD +C+R+ GHD +A P+G + +A D+ + +W+V G+C F GH
Sbjct: 3 IKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGH 62
Query: 144 KGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKH 187
+ V + P+ D +L+ S S+D TVRVW + K+C A L +H
Sbjct: 63 REWVRMV--RPNQDGTLIASCSNDQTVRVWVVATKECKAELREH 104
Score = 183 (69.5 bits), Expect = 4.0e-13, P = 4.0e-13
Identities = 43/126 (34%), Positives = 57/126 (45%)
Query: 517 TACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEG 576
T +W + T GH + SV P +++AS DKTIK+W + G C+KTF G
Sbjct: 2 TIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTG 61
Query: 577 HTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKI----WALAVGKKT 632
H V G I SC D V++W V T EC A +HE + WA +
Sbjct: 62 HREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSS 121
Query: 633 EMFATG 638
ATG
Sbjct: 122 ISEATG 127
Score = 151 (58.2 bits), Expect = 2.7e-18, Sum P(2) = 2.7e-18
Identities = 34/121 (28%), Positives = 55/121 (45%)
Query: 126 VLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLD 185
+ +WD G C GH VSS+ P+ D + S S D T+++W++ CV T
Sbjct: 3 IKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDH--IVSASRDKTIKMWEVQTGYCVKTFT 60
Query: 186 KHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYEMVEAVCAIPPGSAFD 245
H V + DG+ + S D+ V +W + CK + +E V + P S++
Sbjct: 61 GHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYS 120
Query: 246 S 246
S
Sbjct: 121 S 121
Score = 151 (58.2 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 26/89 (29%), Positives = 45/89 (50%)
Query: 559 TIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDK 618
TIK+W C++T GH +V + + G IVS D +K+W V+TG C+ T+
Sbjct: 2 TIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTG 61
Query: 619 HEDKIWALAVGKKTEMFATGGSDALVNLW 647
H + + + + + A+ +D V +W
Sbjct: 62 HREWVRMVRPNQDGTLIASCSNDQTVRVW 90
Score = 146 (56.5 bits), Expect = 2.6e-08, P = 2.6e-08
Identities = 43/195 (22%), Positives = 84/195 (43%)
Query: 25 LVVSSDGSFIACACGE-SINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSRE 83
+ + +G I A + +I + ++ T G + + + + D L+ S + +
Sbjct: 27 VAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQT 86
Query: 84 IRVWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGH 143
+RVW ++T +C + H+ ++ P + + A + GH
Sbjct: 87 VRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSEV--------------GH 132
Query: 144 KGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTL 203
V +LFH + + S +DD T+RVWD K+C+ TL+ H VTS+ +
Sbjct: 133 DNWVRGVLFH--SGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYV 190
Query: 204 ISAGRDKVVNLWDLR 218
++ D+ V +W+ R
Sbjct: 191 VTGSVDQTVKVWECR 205
Score = 131 (51.2 bits), Expect = 4.0e-06, P = 4.0e-06
Identities = 28/113 (24%), Positives = 55/113 (48%)
Query: 465 TIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLP 524
TIK+W F G + + M+ H +++S+A+ PN + + S+D+T +W +
Sbjct: 2 TIKLWDFQGF--ECIRTMH--------GHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQ 51
Query: 525 DLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGH 577
V TF GH+ + V + ++ + S D+T+++W ++ C H
Sbjct: 52 TGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREH 104
Score = 127 (49.8 bits), Expect = 4.1e-13, Sum P(2) = 4.1e-13
Identities = 26/89 (29%), Positives = 46/89 (51%)
Query: 169 TVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPT 228
T+++WD +C+ T+ H V+S+AI +G ++SA RDK + +W+++ C T
Sbjct: 2 TIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTG 61
Query: 229 YEMVEAVCAIPPGSAFDSFLSSYNQQTIK 257
+ E V + P S N QT++
Sbjct: 62 HR--EWVRMVRPNQDGTLIASCSNDQTVR 88
Score = 109 (43.4 bits), Expect = 4.1e-13, Sum P(2) = 4.1e-13
Identities = 36/148 (24%), Positives = 61/148 (41%)
Query: 502 VAPND--SLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKT 559
V PN +L+ + S D+T VW + R H+ + + ++P
Sbjct: 69 VRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYS-------- 120
Query: 560 IKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKH 619
SIS+ + + GH + V F + G I+SC D +++W + C+ T + H
Sbjct: 121 ----SISEATGSEV--GHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAH 174
Query: 620 EDKIWALAVGKKTEMFATGGSDALVNLW 647
E + +L K TG D V +W
Sbjct: 175 EHFVTSLDFHKTAPYVVTGSVDQTVKVW 202
Score = 106 (42.4 bits), Expect = 2.0e-23, Sum P(2) = 2.0e-23
Identities = 20/75 (26%), Positives = 34/75 (45%)
Query: 534 GHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQI 593
GH + V F + +++ + DKT+++W + C+KT H V F +
Sbjct: 131 GHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYV 190
Query: 594 VSCGADGLVKLWTVR 608
V+ D VK+W R
Sbjct: 191 VTGSVDQTVKVWECR 205
Score = 105 (42.0 bits), Expect = 6.2e-10, Sum P(2) = 6.2e-10
Identities = 24/92 (26%), Positives = 46/92 (50%)
Query: 378 VQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVG 437
++++D C + GH V + A+ IV+ S+D ++++W+ ++ CV
Sbjct: 3 IKLWDFQGFECIRTMHGHDHNV---SSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTF 59
Query: 438 TGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVW 469
TGH V V ++ + S S+D T++VW
Sbjct: 60 TGHREWVRMVRPNQD-GTLIASCSNDQTVRVW 90
Score = 96 (38.9 bits), Expect = 2.2e-22, Sum P(2) = 2.2e-22
Identities = 21/62 (33%), Positives = 37/62 (59%)
Query: 408 SSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIK 467
S GK I++ + D ++R+WD +++ C+ H V ++ F K ++V+GS D T+K
Sbjct: 143 SGGKF-ILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAP-YVVTGSVDQTVK 200
Query: 468 VW 469
VW
Sbjct: 201 VW 202
Score = 86 (35.3 bits), Expect = 5.6e-08, Sum P(2) = 5.6e-08
Identities = 28/125 (22%), Positives = 54/125 (43%)
Query: 422 SVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQP 481
+++LWD + C+ GH V +VA + +VS S D TIK+W + +
Sbjct: 2 TIKLWDFQGFECIRTMHGHDHNVSSVAIMPN-GDHIVSASRDKTIKMW-------EVQTG 53
Query: 482 MNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWS 541
+K H + + + + +L+ + S D+T VW + R H+ +
Sbjct: 54 YCVKT---FTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVEC 110
Query: 542 VEFSP 546
+ ++P
Sbjct: 111 ISWAP 115
Score = 82 (33.9 bits), Expect = 6.3e-21, Sum P(2) = 6.3e-21
Identities = 16/71 (22%), Positives = 32/71 (45%)
Query: 493 HGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVI 552
H + + + + + D+T VW + + T H+ + S++F V+
Sbjct: 132 HDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVV 191
Query: 553 TASGDKTIKIW 563
T S D+T+K+W
Sbjct: 192 TGSVDQTVKVW 202
Score = 72 (30.4 bits), Expect = 7.0e-20, Sum P(2) = 7.0e-20
Identities = 25/87 (28%), Positives = 35/87 (40%)
Query: 435 GVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHG 494
G GH V V F F++S + D T++VW + N + + AH
Sbjct: 127 GSEVGHDNWVRGVLFHSG-GKFILSCADDKTLRVWDYK----------NKRCMKTLNAHE 175
Query: 495 KDINSLAVAPNDSLVCTGSQDRTACVW 521
+ SL V TGS D+T VW
Sbjct: 176 HFVTSLDFHKTAPYVVTGSVDQTVKVW 202
Score = 55 (24.4 bits), Expect = 8.4e-05, Sum P(2) = 8.4e-05
Identities = 17/100 (17%), Positives = 45/100 (45%)
Query: 351 GYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSG 410
G++ + + + + ++ A+ + ++++++ + C GH E V + +
Sbjct: 19 GHDHNVSSVAIMPNGD-HIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRP---NQD 74
Query: 411 KILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFS 450
LI + S D +VR+W ++ C H V ++++
Sbjct: 75 GTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWA 114
>POMBASE|SPBPJ4664.04 [details] [associations]
symbol:SPBPJ4664.04 "coatomer alpha subunit
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003674
"molecular_function" evidence=ND] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005794 "Golgi apparatus" evidence=IDA]
[GO:0006886 "intracellular protein transport" evidence=IC]
[GO:0006888 "ER to Golgi vesicle-mediated transport" evidence=ISO]
[GO:0006890 "retrograde vesicle-mediated transport, Golgi to ER"
evidence=ISO] [GO:0030126 "COPI vesicle coat" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006692
InterPro:IPR010714 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053
Pfam:PF06957 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
PomBase:SPBPJ4664.04 GO:GO:0006886 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005198
EMBL:CU329671 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006888 GO:GO:0030126 GO:GO:0006890 HSSP:P63005
HOGENOM:HOG000195913 KO:K05236 OMA:PLAADHI InterPro:IPR016391
PIRSF:PIRSF003354 RefSeq:NP_595279.1 ProteinModelPortal:Q96WV5
STRING:Q96WV5 EnsemblFungi:SPBPJ4664.04.1 GeneID:2541412
KEGG:spo:SPBPJ4664.04 OrthoDB:EOG40VZXP NextBio:20802518
Uniprot:Q96WV5
Length = 1207
Score = 225 (84.3 bits), Expect = 2.0e-23, Sum P(2) = 2.0e-23
Identities = 53/177 (29%), Positives = 78/177 (44%)
Query: 57 EGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPSGGL 116
E S +A P + +S H+ I++WD L + GHDGP G+A HP+ L
Sbjct: 8 ESRSSRAKGVAFHPTQPWILTSLHNGRIQLWDYRMGTLLDRFDGHDGPVRGIAFHPTQPL 67
Query: 117 LATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLL 176
+ G D KV VW+ GH V FH + + S SDD T+R+W+
Sbjct: 68 FVSGGDDYKVNVWNYKSRKLLFSLCGHMDYVRVCTFHHEYP--WILSCSDDQTIRIWNWQ 125
Query: 177 AKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYEMVE 233
++ C+A L H V A ++SA D+ V +WD+ K P +E
Sbjct: 126 SRNCIAILTGHSHYVMCAAFHPSEDLIVSASLDQTVRVWDISGLRMKNAAPVSMSLE 182
Score = 170 (64.9 bits), Expect = 9.7e-08, Sum P(2) = 9.7e-08
Identities = 67/298 (22%), Positives = 129/298 (43%)
Query: 92 LKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSIL 151
++ L ++ A G+A HP+ + T+ + ++ +WD G F GH G V I
Sbjct: 1 MEMLTKFESRSSRAKGVAFHPTQPWILTSLHNGRIQLWDYRMGTLLDRFDGHDGPVRGIA 60
Query: 152 FHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKV 211
FHP + L SG DD V VW+ ++K + +L H V + ++S D+
Sbjct: 61 FHPT--QPLFVSGGDDYKVNVWNYKSRKLLFSLCGHMDYVRVCTFHHEYPWILSCSDDQT 118
Query: 212 VNLWDLRDYSCKLTVPTYEMVEAVCAIPPGSAFDSFLSSYNQQTIK----KKRRSLEIHF 267
+ +W+ + +C + + T +CA S D +S+ QT++ R
Sbjct: 119 IRIWNWQSRNC-IAILTGHSHYVMCAAFHPSE-DLIVSASLDQTVRVWDISGLRMKNAAP 176
Query: 268 ITVG-ERGIVRMWNADSACLYEQKSSDVTISFEMDDSKRGFTAATVLPSNQGLLCVTADQ 326
+++ E + + N+ S L+ S+D + F ++ RG P+ +L D+
Sbjct: 177 VSMSLEDQLAQAHNSISNDLFG--STDAIVKFVLEGHDRGVNWCAFHPTLPLILSAGDDR 234
Query: 327 QLLLYTTVEVPEKKMELILSKRLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLS 384
+ L+ K E+ + G+ + F +E L+ A+ + ++V+DL+
Sbjct: 235 LVKLWRMTA--SKAWEVDTCR---GHFNNVSCCLFHPHQELILS-ASEDKTIRVWDLN 286
Score = 154 (59.3 bits), Expect = 9.5e-16, Sum P(2) = 9.5e-16
Identities = 44/177 (24%), Positives = 85/177 (48%)
Query: 334 VEVPEKKMELILSKRLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLA 393
+++ + +M +L R G++ + + F + +++ + + V V++ S + L
Sbjct: 35 IQLWDYRMGTLLD-RFDGHDGPVRGIAFHPTQPLFVSGGDDYK-VNVWNYKSRKLLFSLC 92
Query: 394 GHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKL 453
GH + V C I++ S D ++R+W+ +SR C+ + TGH V AF
Sbjct: 93 GHMDYVR---VCTFHHEYPWILSCSDDQTIRIWNWQSRNCIAILTGHSHYVMCAAFHPS- 148
Query: 454 QNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVA-AHGKDINSLAVAPNDSLV 509
++ +VS S D T++VW GL P+++ + +A AH N L D++V
Sbjct: 149 EDLIVSASLDQTVRVWDISGLRMKNAAPVSMSLEDQLAQAHNSISNDL-FGSTDAIV 204
Score = 149 (57.5 bits), Expect = 3.3e-15, Sum P(2) = 3.3e-15
Identities = 50/186 (26%), Positives = 74/186 (39%)
Query: 42 INIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGH 101
I + D ++ +G + +A P L S G ++ VW+ + K L S GH
Sbjct: 35 IQLWDYRMGTLLDRFDGHDGPVRGIAFHPTQPLFVSGGDDYKVNVWNYKSRKLLFSLCGH 94
Query: 102 DGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLL 161
H + + D+ + +W+ C GH V FHP D L+
Sbjct: 95 MDYVRVCTFHHEYPWILSCSDDQTIRIWNWQSRNCIAILTGHSHYVMCAAFHPSED--LI 152
Query: 162 FSGSDDATVRVWDL--LAKKCVATLDKHFSRVTSMA---ITSD--GST-----LISAGRD 209
S S D TVRVWD+ L K A + + A I++D GST + G D
Sbjct: 153 VSASLDQTVRVWDISGLRMKNAAPVSMSLEDQLAQAHNSISNDLFGSTDAIVKFVLEGHD 212
Query: 210 KVVNLW 215
+ VN W
Sbjct: 213 RGVN-W 217
Score = 137 (53.3 bits), Expect = 9.4e-05, Sum P(2) = 9.4e-05
Identities = 39/121 (32%), Positives = 57/121 (47%)
Query: 99 KGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHY--FKGHKGVVSSILFHPDT 156
+GHD A HP+ L+ +AG DR V +W + +GH VS LFHP
Sbjct: 209 EGHDRGVNWCAFHPTLPLILSAGDDRLVKLWRMTASKAWEVDTCRGHFNNVSCCLFHPHQ 268
Query: 157 DKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWD 216
+ L+ S S+D T+RVWDL + V T + R + + L +A D V ++
Sbjct: 269 E--LILSASEDKTIRVWDLNRRTAVQTFRRDNDRFWFITVHPK-LNLFAAAHDSGVMVFK 325
Query: 217 L 217
L
Sbjct: 326 L 326
Score = 135 (52.6 bits), Expect = 2.0e-23, Sum P(2) = 2.0e-23
Identities = 28/115 (24%), Positives = 53/115 (46%)
Query: 525 DLVSVVTFRGHKRGI-WSVEFSPVDQVVITASGDKTIKIWSISDGSC--LKTFEGHTSSV 581
D + GH RG+ W F P ++++A D+ +K+W ++ + T GH ++V
Sbjct: 201 DAIVKFVLEGHDRGVNWCA-FHPTLPLILSAGDDRLVKLWRMTASKAWEVDTCRGHFNNV 259
Query: 582 LRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFA 636
F I+S D +++W + + T+ + D+ W + V K +FA
Sbjct: 260 SCCLFHPHQELILSASEDKTIRVWDLNRRTAVQTFRRDNDRFWFITVHPKLNLFA 314
Score = 135 (52.6 bits), Expect = 5.7e-05, P = 5.7e-05
Identities = 35/153 (22%), Positives = 63/153 (41%)
Query: 414 IVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDG 473
I+T + ++LWD + GH G V +AF Q VSG D+ + VW++
Sbjct: 26 ILTSLHNGRIQLWDYRMGTLLDRFDGHDGPVRGIAFHPT-QPLFVSGGDDYKVNVWNYK- 83
Query: 474 LSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFR 533
+ K + H + + + S D+T +W +
Sbjct: 84 ---------SRKLLFSLCGHMDYVRVCTFHHEYPWILSCSDDQTIRIWNWQSRNCIAILT 134
Query: 534 GHKRGIWSVEFSPVDQVVITASGDKTIKIWSIS 566
GH + F P + ++++AS D+T+++W IS
Sbjct: 135 GHSHYVMCAAFHPSEDLIVSASLDQTVRVWDIS 167
Score = 130 (50.8 bits), Expect = 6.7e-23, Sum P(2) = 6.7e-23
Identities = 29/105 (27%), Positives = 54/105 (51%)
Query: 472 DGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVS--V 529
+ +S+D + K V+ H + +N A P L+ + DR +WR+ + V
Sbjct: 190 NSISNDLFGSTDAIVKFVLEGHDRGVNWCAFHPTLPLILSAGDDRLVKLWRMTASKAWEV 249
Query: 530 VTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTF 574
T RGH + F P +++++AS DKTI++W ++ + ++TF
Sbjct: 250 DTCRGHFNNVSCCLFHPHQELILSASEDKTIRVWDLNRRTAVQTF 294
Score = 127 (49.8 bits), Expect = 0.00041, P = 0.00041
Identities = 31/150 (20%), Positives = 58/150 (38%)
Query: 500 LAVAPNDSLVCTGSQDRTACVW--RLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGD 557
+A P + T + +W R+ L+ F GH + + F P + ++ D
Sbjct: 17 VAFHPTQPWILTSLHNGRIQLWDYRMGTLLD--RFDGHDGPVRGIAFHPTQPLFVSGGDD 74
Query: 558 KTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYD 617
+ +W+ L + GH V +F I+SC D +++W ++ CIA
Sbjct: 75 YKVNVWNYKSRKLLFSLCGHMDYVRVCTFHHEYPWILSCSDDQTIRIWNWQSRNCIAILT 134
Query: 618 KHEDKIWALAVGKKTEMFATGGSDALVNLW 647
H + A ++ + D V +W
Sbjct: 135 GHSHYVMCAAFHPSEDLIVSASLDQTVRVW 164
Score = 127 (49.8 bits), Expect = 0.00041, P = 0.00041
Identities = 42/191 (21%), Positives = 75/191 (39%)
Query: 460 GSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVA---AHGKDINSLAVAPNDSLVCTGSQDR 516
G + H + W L + Q + + ++ H + +A P L +G D
Sbjct: 16 GVAFHPTQPWILTSLHNGRIQLWDYRMGTLLDRFDGHDGPVRGIAFHPTQPLFVSGGDDY 75
Query: 517 TACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEG 576
VW + + GH + F +++ S D+TI+IW+ +C+ G
Sbjct: 76 KVNVWNYKSRKLLFSLCGHMDYVRVCTFHHEYPWILSCSDDQTIRIWNWQSRNCIAILTG 135
Query: 577 HTSSVLRASFLTRGAQIVSCGADGLVKLWTV---RTGECIATYDKHEDKIWALAVGKKTE 633
H+ V+ A+F IVS D V++W + R ED++ +
Sbjct: 136 HSHYVMCAAFHPSEDLIVSASLDQTVRVWDISGLRMKNAAPVSMSLEDQLAQAHNSISND 195
Query: 634 MFATGGSDALV 644
+F G +DA+V
Sbjct: 196 LF--GSTDAIV 204
Score = 85 (35.0 bits), Expect = 3.3e-18, Sum P(2) = 3.3e-18
Identities = 28/127 (22%), Positives = 50/127 (39%)
Query: 439 GHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDIN 498
GH V AF L ++S D +K+W A + + H +++
Sbjct: 210 GHDRGVNWCAFHPTLP-LILSAGDDRLVKLWRMT-----ASKAWEVDT---CRGHFNNVS 260
Query: 499 SLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDK 558
P+ L+ + S+D+T VW L +V TFR W + P + A+ D
Sbjct: 261 CCLFHPHQELILSASEDKTIRVWDLNRRTAVQTFRRDNDRFWFITVHPKLNL-FAAAHDS 319
Query: 559 TIKIWSI 565
+ ++ +
Sbjct: 320 GVMVFKL 326
Score = 46 (21.3 bits), Expect = 3.7e-14, Sum P(2) = 3.7e-14
Identities = 22/97 (22%), Positives = 45/97 (46%)
Query: 296 ISFEMDDSKRGFTAATVLPSNQGLLCVTADQQLLLYTTVEVPEKKMELILSKRLVGYNEE 355
+SFE+D ++ F A + + +L + + L+ + +KK ++ + V
Sbjct: 595 VSFEIDPTEYLFKLALLRKDYEQVLHLIQNSNLVGQAIIAYLQKKGYPEIALQFVEDPST 654
Query: 356 ILDLKF-LGEEEQYLAVATNIEQVQVYD-LSSMSCSY 390
+L G E L +A I++ +V+ L+S + SY
Sbjct: 655 RFELALECGNLETALELARTIDRPEVWSRLASDAMSY 691
Score = 41 (19.5 bits), Expect = 1.2e-13, Sum P(2) = 1.2e-13
Identities = 17/59 (28%), Positives = 25/59 (42%)
Query: 411 KILIVTGSKDNSV-RLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKV 468
K+ ++T S DN V L + SR ++ G A F V SD TI++
Sbjct: 385 KVALLTSSADNGVYELVNVSSRSNSLPLKDNIKGPGDDAIFVARNRFAVFSRSDQTIEI 443
>UNIPROTKB|G4MUR7 [details] [associations]
symbol:MGG_08829 "Transcriptional repressor rco-1"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:CM001232
KO:K06666 InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558
RefSeq:XP_003713847.1 ProteinModelPortal:G4MUR7 SMR:G4MUR7
EnsemblFungi:MGG_08829T0 GeneID:2679815 KEGG:mgr:MGG_08829
Uniprot:G4MUR7
Length = 607
Score = 277 (102.6 bits), Expect = 7.2e-21, P = 7.2e-21
Identities = 84/300 (28%), Positives = 135/300 (45%)
Query: 367 QYLAVATNIEQVQVYDLSSMSCSYVL----AGHSEIVLCLDTCALSSGKILIVTGSKDNS 422
+Y+A N Q++D+++ VL A + + C GK L TG++D
Sbjct: 312 KYVATGCN-RSAQIFDVNTGEKVCVLQDDNADTTGDLYIRSVCFSPDGKYL-ATGAEDKQ 369
Query: 423 VRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPM 482
+R+WD +R GH + ++ F++ + + SGS D T+++W D E
Sbjct: 370 IRVWDITTRTIRIQFAGHEQDIYSLDFARDGRT-IASGSGDRTVRLW-------DIE--- 418
Query: 483 NLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRG---HKRGI 539
N A V + ++A++P+ V GS D++ VW L V G HK +
Sbjct: 419 NGTALTVFTIED-GVTTVAISPDTKYVAAGSLDKSVRVWDLTQGCPVERLEGPDGHKDSV 477
Query: 540 WSVEFSPVDQVVITASGDKTIKIWSISD------------GSCLKTFEGHTSSVLRASFL 587
+SV FSP + ++T S DKTIK+W ++ G C+KTFEGH VL +
Sbjct: 478 YSVAFSPNGRDLVTGSLDKTIKLWELATPRGNMQNQGSKGGRCVKTFEGHRDFVLSVALT 537
Query: 588 TRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLW 647
++S D V+ W RTG H++ + ++A FATG D +W
Sbjct: 538 PDNQWVMSGSKDRGVQFWDPRTGSTQLMLQGHKNSVISVAPSPTGGFFATGSGDMRARIW 597
Score = 247 (92.0 bits), Expect = 2.3e-23, Sum P(2) = 2.3e-23
Identities = 61/199 (30%), Positives = 97/199 (48%)
Query: 28 SSDGSFIACACGESINIVDLSNASIKSTIEG-GSDT-----ITALALSPDDKLLFSSGHS 81
S+DG ++A C S I D++ ++ +DT I ++ SPD K L +
Sbjct: 308 SADGKYVATGCNRSAQIFDVNTGEKVCVLQDDNADTTGDLYIRSVCFSPDGKYLATGAED 367
Query: 82 REIRVWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFK 141
++IRVWD++T + GH+ + G +A+ DR V +WD++ G F
Sbjct: 368 KQIRVWDITTRTIRIQFAGHEQDIYSLDFARDGRTIASGSGDRTVRLWDIENGTALTVFT 427
Query: 142 GHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATL---DKHFSRVTSMAITS 198
GV +++ PDT + +GS D +VRVWDL V L D H V S+A +
Sbjct: 428 IEDGV-TTVAISPDT--KYVAAGSLDKSVRVWDLTQGCPVERLEGPDGHKDSVYSVAFSP 484
Query: 199 DGSTLISAGRDKVVNLWDL 217
+G L++ DK + LW+L
Sbjct: 485 NGRDLVTGSLDKTIKLWEL 503
Score = 236 (88.1 bits), Expect = 2.3e-16, P = 2.3e-16
Identities = 71/252 (28%), Positives = 122/252 (48%)
Query: 367 QYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLW 426
+YLA +Q++V+D+++ + AGH + + LD G+ I +GS D +VRLW
Sbjct: 359 KYLATGAEDKQIRVWDITTRTIRIQFAGHEQDIYSLDFAR--DGRT-IASGSGDRTVRLW 415
Query: 427 DSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKA 486
D E+ + V T G V VA S + ++ +GS D +++VW D Q ++
Sbjct: 416 DIENGTALTVFTIEDG-VTTVAISPDTK-YVAAGSLDKSVRVW-------DLTQGCPVER 466
Query: 487 KAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRL--P--DLVS--------VVTFRG 534
H + S+A +PN + TGS D+T +W L P ++ + V TF G
Sbjct: 467 LEGPDGHKDSVYSVAFSPNGRDLVTGSLDKTIKLWELATPRGNMQNQGSKGGRCVKTFEG 526
Query: 535 HKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIV 594
H+ + SV +P +Q V++ S D+ ++ W GS +GH +SV+ + G
Sbjct: 527 HRDFVLSVALTPDNQWVMSGSKDRGVQFWDPRTGSTQLMLQGHKNSVISVAPSPTGGFFA 586
Query: 595 SCGADGLVKLWT 606
+ D ++W+
Sbjct: 587 TGSGDMRARIWS 598
Score = 222 (83.2 bits), Expect = 7.9e-15, P = 7.9e-15
Identities = 72/279 (25%), Positives = 127/279 (45%)
Query: 395 HSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSES--RCCV-----GVGTGHMGAVGAV 447
H +V C+ A GK + TG + S +++D + + CV TG + + +V
Sbjct: 298 HESVVCCVRFSA--DGKY-VATGC-NRSAQIFDVNTGEKVCVLQDDNADTTGDL-YIRSV 352
Query: 448 AFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDS 507
FS +L +G+ D I+VW D + + ++ A H +DI SL A +
Sbjct: 353 CFSPD-GKYLATGAEDKQIRVW------DITTRTIRIQ----FAGHEQDIYSLDFARDGR 401
Query: 508 LVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISD 567
+ +GS DRT +W + + ++ F + G+ +V SP + V S DK++++W ++
Sbjct: 402 TIASGSGDRTVRLWDIENGTALTVFT-IEDGVTTVAISPDTKYVAAGSLDKSVRVWDLTQ 460
Query: 568 GSCLKTFEG---HTSSVLRASFLTRGAQIVSCGADGLVKLWTVRT------------GEC 612
G ++ EG H SV +F G +V+ D +KLW + T G C
Sbjct: 461 GCPVERLEGPDGHKDSVYSVAFSPNGRDLVTGSLDKTIKLWELATPRGNMQNQGSKGGRC 520
Query: 613 IATYDKHEDKIWALAVGKKTEMFATGGSDALVNLWHDST 651
+ T++ H D + ++A+ + +G D V W T
Sbjct: 521 VKTFEGHRDFVLSVALTPDNQWVMSGSKDRGVQFWDPRT 559
Score = 217 (81.4 bits), Expect = 2.8e-14, P = 2.8e-14
Identities = 64/234 (27%), Positives = 107/234 (45%)
Query: 28 SSDGSFIACACGES-INIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRV 86
S DG ++A + I + D++ +I+ G I +L + D + + S R +R+
Sbjct: 355 SPDGKYLATGAEDKQIRVWDITTRTIRIQFAGHEQDIYSLDFARDGRTIASGSGDRTVRL 414
Query: 87 WDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKG---H 143
WD+ L + DG +A P +A D+ V VWD+ G +G H
Sbjct: 415 WDIENGTALTVFTIEDGVTT-VAISPDTKYVAAGSLDKSVRVWDLTQGCPVERLEGPDGH 473
Query: 144 KGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKK------------CVATLDKHFSRV 191
K V S+ F P+ + L+ +GS D T+++W+L + CV T + H V
Sbjct: 474 KDSVYSVAFSPN-GRDLV-TGSLDKTIKLWELATPRGNMQNQGSKGGRCVKTFEGHRDFV 531
Query: 192 TSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYE-MVEAVCAIPPGSAF 244
S+A+T D ++S +D+ V WD R S +L + ++ V +V P G F
Sbjct: 532 LSVALTPDNQWVMSGSKDRGVQFWDPRTGSTQLMLQGHKNSVISVAPSPTGGFF 585
Score = 196 (74.1 bits), Expect = 5.5e-12, P = 5.5e-12
Identities = 57/204 (27%), Positives = 91/204 (44%)
Query: 30 DGSFIACACGE-SINIVDLSNASIKS--TIEGGSDTITALALSPDDKLLFSSGHSREIRV 86
DG IA G+ ++ + D+ N + + TIE G +T +A+SPD K + + + +RV
Sbjct: 399 DGRTIASGSGDRTVRLWDIENGTALTVFTIEDG---VTTVAISPDTKYVAAGSLDKSVRV 455
Query: 87 WDLST---LKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDV------------ 131
WDL+ ++ L GH +A P+G L T D+ + +W++
Sbjct: 456 WDLTQGCPVERLEGPDGHKDSVYSVAFSPNGRDLVTGSLDKTIKLWELATPRGNMQNQGS 515
Query: 132 DGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRV 191
GG C F+GH+ V S+ PD + SGS D V+ WD L H + V
Sbjct: 516 KGGRCVKTFEGHRDFVLSVALTPDNQ--WVMSGSKDRGVQFWDPRTGSTQLMLQGHKNSV 573
Query: 192 TSMAITSDGSTLISAGRDKVVNLW 215
S+A + G + D +W
Sbjct: 574 ISVAPSPTGGFFATGSGDMRARIW 597
Score = 131 (51.2 bits), Expect = 1.3e-10, Sum P(2) = 1.3e-10
Identities = 43/155 (27%), Positives = 65/155 (41%)
Query: 90 STLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSS 149
S + C+R DG + C+ S + KV V D T G + S
Sbjct: 300 SVVCCVRF--SADGKYVATGCNRSAQIF-DVNTGEKVCVLQDDNADTT----GDL-YIRS 351
Query: 150 ILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRD 209
+ F PD L +G++D +RVWD+ + H + S+ DG T+ S D
Sbjct: 352 VCFSPDG--KYLATGAEDKQIRVWDITTRTIRIQFAGHEQDIYSLDFARDGRTIASGSGD 409
Query: 210 KVVNLWDLRDYSCKLTVPTYEMVEAVCAIPPGSAF 244
+ V LWD+ + + LTV T E AI P + +
Sbjct: 410 RTVRLWDIENGTA-LTVFTIEDGVTTVAISPDTKY 443
Score = 102 (41.0 bits), Expect = 2.3e-23, Sum P(2) = 2.3e-23
Identities = 26/84 (30%), Positives = 41/84 (48%)
Query: 388 CSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAV 447
C GH + VL + AL+ +++GSKD V+ WD + + GH +V +V
Sbjct: 520 CVKTFEGHRDFVLSV---ALTPDNQWVMSGSKDRGVQFWDPRTGSTQLMLQGHKNSVISV 576
Query: 448 AFSKKLQNFLVSGSSDHTIKVWSF 471
A S F +GS D ++WS+
Sbjct: 577 APSPT-GGFFATGSGDMRARIWSY 599
>FB|FBgn0030365 [details] [associations]
symbol:Tango4 "Transport and Golgi organization 4"
species:7227 "Drosophila melanogaster" [GO:0003674
"molecular_function" evidence=ND] [GO:0009306 "protein secretion"
evidence=IMP] [GO:0005829 "cytosol" evidence=IDA] [GO:0007030
"Golgi organization" evidence=IMP] [GO:0071013 "catalytic step 2
spliceosome" evidence=IDA] [GO:0071011 "precatalytic spliceosome"
evidence=IDA] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IC] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005829 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:AE014298 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0009306 GO:GO:0071011 GO:GO:0000398
GO:GO:0071013 GO:GO:0007030 HSSP:P16649
GeneTree:ENSGT00700000104496 KO:K12862 OMA:ITAEADK EMBL:AY051707
RefSeq:NP_572778.1 UniGene:Dm.4503 SMR:Q9VYQ9 MINT:MINT-757865
STRING:Q9VYQ9 EnsemblMetazoa:FBtr0073622 GeneID:32168
KEGG:dme:Dmel_CG1796 UCSC:CG1796-RA CTD:32168 FlyBase:FBgn0030365
InParanoid:Q9VYQ9 OrthoDB:EOG4C2FRR GenomeRNAi:32168 NextBio:777227
Uniprot:Q9VYQ9
Length = 482
Score = 264 (98.0 bits), Expect = 2.3e-23, Sum P(2) = 2.3e-23
Identities = 60/188 (31%), Positives = 94/188 (50%)
Query: 25 LVVSSDGSFIACACGES-INIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSRE 83
+ V + A G+ I I DL++ +K ++ G T+ +A+S LFS G R+
Sbjct: 178 IAVEPGNEWFATGAGDRVIKIWDLASGKLKLSLTGHVSTVRGVAVSTKHPYLFSCGEDRQ 237
Query: 84 IRVWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGH 143
++ WDL K +R + GH +A HP+ +LAT+G D +WD+ H GH
Sbjct: 238 VKCWDLEYNKVIRHYHGHLSAVYSLALHPTIDVLATSGRDSTARIWDMRTKANVHTLTGH 297
Query: 144 KGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTL 203
V+S++ T+ ++ +GS D+TVR+WDL A K V TL H V S+ +
Sbjct: 298 TNTVASVVAQA-TNPQII-TGSHDSTVRLWDLAAGKSVCTLTNHKKSVRSIVLHPSLYMF 355
Query: 204 ISAGRDKV 211
SA D +
Sbjct: 356 ASASPDNI 363
Score = 224 (83.9 bits), Expect = 2.8e-15, P = 2.8e-15
Identities = 69/261 (26%), Positives = 112/261 (42%)
Query: 389 SYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVA 448
S V++GH V C+ A+ G TG+ D +++WD S TGH+ V VA
Sbjct: 165 SRVISGHLGWVRCI---AVEPGNEWFATGAGDRVIKIWDLASGKLKLSLTGHVSTVRGVA 221
Query: 449 FSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHG--KDINSLAVAPND 506
S K +L S D +K W D E N K + HG + SLA+ P
Sbjct: 222 VSTK-HPYLFSCGEDRQVKCW-------DLEY--N---KVIRHYHGHLSAVYSLALHPTI 268
Query: 507 SLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSIS 566
++ T +D TA +W + +V T GH + SV + +IT S D T+++W ++
Sbjct: 269 DVLATSGRDSTARIWDMRTKANVHTLTGHTNTVASVVAQATNPQIITGSHDSTVRLWDLA 328
Query: 567 DGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWAL 626
G + T H SV R+ L + + + +K W G+ + H + +
Sbjct: 329 AGKSVCTLTNHKKSV-RSIVLHPSLYMFASASPDNIKQWRCPEGKFVQNISGHTSIVNCM 387
Query: 627 AVGKKTEMFATGGSDALVNLW 647
A + + +GG + + W
Sbjct: 388 AANSEG-VLVSGGDNGTMFFW 407
Score = 223 (83.6 bits), Expect = 1.2e-18, Sum P(2) = 1.2e-18
Identities = 49/166 (29%), Positives = 78/166 (46%)
Query: 52 IKSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACH 111
+ I G + +A+ P ++ + R I++WDL++ K S GH G+A
Sbjct: 164 LSRVISGHLGWVRCIAVEPGNEWFATGAGDRVIKIWDLASGKLKLSLTGHVSTVRGVAVS 223
Query: 112 PSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVR 171
L + G DR+V WD++ ++ GH V S+ HP D +L + D+T R
Sbjct: 224 TKHPYLFSCGEDRQVKCWDLEYNKVIRHYHGHLSAVYSLALHPTID--VLATSGRDSTAR 281
Query: 172 VWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDL 217
+WD+ K V TL H + V S+ + +I+ D V LWDL
Sbjct: 282 IWDMRTKANVHTLTGHTNTVASVVAQATNPQIITGSHDSTVRLWDL 327
Score = 207 (77.9 bits), Expect = 2.1e-13, P = 2.1e-13
Identities = 65/245 (26%), Positives = 105/245 (42%)
Query: 367 QYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLW 426
++ A ++++DL+S L GH V + A+S+ + + +D V+ W
Sbjct: 185 EWFATGAGDRVIKIWDLASGKLKLSLTGHVSTVRGV---AVSTKHPYLFSCGEDRQVKCW 241
Query: 427 DSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKA 486
D E + GH+ AV ++A + SG D T ++W M KA
Sbjct: 242 DLEYNKVIRHYHGHLSAVYSLALHPTIDVLATSGR-DSTARIWD-----------MRTKA 289
Query: 487 KA-VVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFS 545
+ H + S+ + + TGS D T +W L SV T HK+ + S+
Sbjct: 290 NVHTLTGHTNTVASVVAQATNPQIITGSHDSTVRLWDLAAGKSVCTLTNHKKSVRSIVLH 349
Query: 546 PVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLW 605
P + +AS D IK W +G ++ GHTS V + + G +VS G +G + W
Sbjct: 350 PSLYMFASASPDN-IKQWRCPEGKFVQNISGHTSIVNCMAANSEGV-LVSGGDNGTMFFW 407
Query: 606 TVRTG 610
RTG
Sbjct: 408 DWRTG 412
Score = 186 (70.5 bits), Expect = 4.3e-11, P = 4.3e-11
Identities = 49/184 (26%), Positives = 76/184 (41%)
Query: 37 ACGES--INIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKC 94
+CGE + DL + G + +LAL P +L +SG R+WD+ T
Sbjct: 231 SCGEDRQVKCWDLEYNKVIRHYHGHLSAVYSLALHPTIDVLATSGRDSTARIWDMRTKAN 290
Query: 95 LRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHP 154
+ + GH + + + T D V +WD+ G HK V SI+ HP
Sbjct: 291 VHTLTGHTNTVASVVAQATNPQIITGSHDSTVRLWDLAAGKSVCTLTNHKKSVRSIVLHP 350
Query: 155 DTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNL 214
+F+ + ++ W K V + H S V MA S+G L+S G + +
Sbjct: 351 SL---YMFASASPDNIKQWRCPEGKFVQNISGHTSIVNCMAANSEG-VLVSGGDNGTMFF 406
Query: 215 WDLR 218
WD R
Sbjct: 407 WDWR 410
Score = 157 (60.3 bits), Expect = 2.4e-16, Sum P(2) = 2.4e-16
Identities = 39/126 (30%), Positives = 53/126 (42%)
Query: 93 KCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILF 152
K R GH G +A P AT DR + +WD+ G GH V +
Sbjct: 163 KLSRVISGHLGWVRCIAVEPGNEWFATGAGDRVIKIWDLASGKLKLSLTGHVSTVRGVAV 222
Query: 153 HPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVV 212
T LFS +D V+ WDL K + H S V S+A+ L ++GRD
Sbjct: 223 --STKHPYLFSCGEDRQVKCWDLEYNKVIRHYHGHLSAVYSLALHPTIDVLATSGRDSTA 280
Query: 213 NLWDLR 218
+WD+R
Sbjct: 281 RIWDMR 286
Score = 143 (55.4 bits), Expect = 3.7e-07, Sum P(2) = 3.7e-07
Identities = 56/246 (22%), Positives = 103/246 (41%)
Query: 368 YLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWD 427
YL QV+ +DL GH V L AL ++ T +D++ R+WD
Sbjct: 228 YLFSCGEDRQVKCWDLEYNKVIRHYHGHLSAVYSL---ALHPTIDVLATSGRDSTARIWD 284
Query: 428 SESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAK 487
++ V TGH V +V ++ +++GS D T+++W D A K+
Sbjct: 285 MRTKANVHTLTGHTNTVASVV-AQATNPQIITGSHDSTVRLW------DLAAG----KSV 333
Query: 488 AVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPV 547
+ H K + S+ + P+ + + S D WR P+ V GH I + +
Sbjct: 334 CTLTNHKKSVRSIVLHPSLYMFASASPDNIK-QWRCPEGKFVQNISGHT-SIVNCMAANS 391
Query: 548 DQVVITASGDKTIKIWSISDGSCLKTFE-----GHTSS---VLRASFLTRGAQIVSCGAD 599
+ V+++ + T+ W G + F+ G S + F G+++++ AD
Sbjct: 392 EGVLVSGGDNGTMFFWDWRTGYNFQRFQAPVQPGSMDSEAGIFAMCFDQSGSRLITAEAD 451
Query: 600 GLVKLW 605
+K++
Sbjct: 452 KTIKVY 457
Score = 136 (52.9 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 42/193 (21%), Positives = 82/193 (42%)
Query: 44 IVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDG 103
I D+ + T+ G ++T+ ++ + + + H +R+WDL+ K + + H
Sbjct: 282 IWDMRTKANVHTLTGHTNTVASVVAQATNPQIITGSHDSTVRLWDLAAGKSVCTLTNHKK 341
Query: 104 PAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFS 163
+ HPS + A+A D + W G GH +V+ + + + +L S
Sbjct: 342 SVRSIVLHPSLYMFASASPDN-IKQWRCPEGKFVQNISGHTSIVNCMAANSE---GVLVS 397
Query: 164 GSDDATVRVWD---------LLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNL 214
G D+ T+ WD A ++D + + +M GS LI+A DK + +
Sbjct: 398 GGDNGTMFFWDWRTGYNFQRFQAPVQPGSMDSE-AGIFAMCFDQSGSRLITAEADKTIKV 456
Query: 215 WDLRDYSCKLTVP 227
+ D + + + P
Sbjct: 457 YKEDDEASEESHP 469
Score = 127 (49.8 bits), Expect = 2.4e-16, Sum P(2) = 2.4e-16
Identities = 51/207 (24%), Positives = 91/207 (43%)
Query: 369 LAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDS 428
LA + +++D+ + + + L GH+ V + A + I+TGS D++VRLWD
Sbjct: 271 LATSGRDSTARIWDMRTKANVHTLTGHTNTVASVVAQATNPQ---IITGSHDSTVRLWDL 327
Query: 429 ESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKA 488
+ V T H +V ++ L F S S D+ IK W + + N
Sbjct: 328 AAGKSVCTLTNHKKSVRSIVLHPSLYMF-ASASPDN-IKQWR----CPEGKFVQN----- 376
Query: 489 VVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRG--------HKRGIW 540
++ H +N +A A ++ ++ +G + T W + F+ + GI+
Sbjct: 377 -ISGHTSIVNCMA-ANSEGVLVSGGDNGTMFFWDWRTGYNFQRFQAPVQPGSMDSEAGIF 434
Query: 541 SVEFSPVDQVVITASGDKTIKIWSISD 567
++ F +ITA DKTIK++ D
Sbjct: 435 AMCFDQSGSRLITAEADKTIKVYKEDD 461
Score = 78 (32.5 bits), Expect = 2.3e-23, Sum P(2) = 2.3e-23
Identities = 27/100 (27%), Positives = 49/100 (49%)
Query: 392 LAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSES-----RCCVGVGTGHMGA--- 443
++GH+ IV C+ A S G ++V+G + ++ WD + R V G M +
Sbjct: 377 ISGHTSIVNCM--AANSEG--VLVSGGDNGTMFFWDWRTGYNFQRFQAPVQPGSMDSEAG 432
Query: 444 VGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMN 483
+ A+ F + L++ +D TIKV+ D + + P+N
Sbjct: 433 IFAMCFDQSGSR-LITAEADKTIKVYKEDDEASEESHPIN 471
Score = 53 (23.7 bits), Expect = 3.7e-07, Sum P(2) = 3.7e-07
Identities = 11/48 (22%), Positives = 20/48 (41%)
Query: 179 KCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTV 226
K + H V +A+ + D+V+ +WDL KL++
Sbjct: 163 KLSRVISGHLGWVRCIAVEPGNEWFATGAGDRVIKIWDLASGKLKLSL 210
>RGD|1308301 [details] [associations]
symbol:Nle1 "notchless homolog 1 (Drosophila)" species:10116
"Rattus norvegicus" [GO:0001826 "inner cell mass cell
differentiation" evidence=IEA;ISO] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005730 "nucleolus" evidence=IEA;ISO] [GO:0007219
"Notch signaling pathway" evidence=IEA;ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 RGD:1308301
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GeneTree:ENSGT00690000102167 PRINTS:PR00319
GO:GO:0001826 HOGENOM:HOG000091641 KO:K14855 InterPro:IPR012972
Pfam:PF08154 CTD:54475 HOVERGEN:HBG007602 OrthoDB:EOG4BCDMS
EMBL:BC166567 IPI:IPI00896225 RefSeq:NP_001121006.1
UniGene:Rn.19087 STRING:B2GV82 Ensembl:ENSRNOT00000011320
GeneID:303372 KEGG:rno:303372 NextBio:651216 Genevestigator:B2GV82
Uniprot:B2GV82
Length = 487
Score = 248 (92.4 bits), Expect = 6.2e-18, P = 6.2e-18
Identities = 74/309 (23%), Positives = 140/309 (45%)
Query: 345 LSKRLVGYNEEILDLKF----LGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVL 400
+ + L G+++ I L + + E +Y+A ++ V+V+D ++ C +L GH++ V
Sbjct: 193 VGRTLTGHSKWITGLSWEPLHMNPECRYVASSSKDGSVRVWDTTAGRCERILTGHTQSVT 252
Query: 401 CLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSG 460
CL G L+ + S+D ++++W + GH V +A S
Sbjct: 253 CLRW----GGDGLLYSASQDRTIKVWRAHDGVLCRTLQGHGHWVNTMALS---------- 298
Query: 461 SSDHTIKVWSFDGLSDDAE-QPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTAC 519
+D+ ++ +F+ Q + K + N + + LV +GS D T
Sbjct: 299 -TDYALRTGAFEPAEATVNAQDLQGSLKELKERASSRYNLVRGQGPERLV-SGSDDFTLF 356
Query: 520 VWR-LPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHT 578
+W D + GH+ I V FSP ++V +AS DK+IK+W G L + GH
Sbjct: 357 LWSPAEDKKPLARMTGHQALINQVLFSPDSRIVASASFDKSIKLWDGRTGKYLASLRGHV 416
Query: 579 SSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATG 638
++V + ++ +VS +D +K+W V+ + H D+++A+ + A+G
Sbjct: 417 AAVYQIAWSADSRLLVSGSSDSTLKVWDVKAQKLTTDLPGHADEVYAVDWSPDGQRVASG 476
Query: 639 GSDALVNLW 647
G D + +W
Sbjct: 477 GKDKCLRIW 485
Score = 215 (80.7 bits), Expect = 2.4e-23, Sum P(2) = 2.4e-23
Identities = 65/222 (29%), Positives = 101/222 (45%)
Query: 13 EPVLQQFYGGGPLVVSSDGSFIACACGESINIVDL---SNASIK--------STIEGGSD 61
EP+ FY +VSS G + E+ IVD+ A + S++EG S+
Sbjct: 58 EPLPLAFYVHDAEIVSSLGKTLESQSVETEKIVDIIYQPQAVFRVRAVTRCTSSLEGHSE 117
Query: 62 TITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAG 121
+ ++A SP K L S +R WDLST + KGH + ++ P G LA+
Sbjct: 118 AVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHFTCKGHRHWVLSISWSPDGKKLASGC 177
Query: 122 ADRKVLVWDVDGGFCT-HYFKGHKGVVSSILFHP---DTDKSLLFSGSDDATVRVWDLLA 177
+ ++L+WD G GH ++ + + P + + + S S D +VRVWD A
Sbjct: 178 KNGQILLWDPSTGTQVGRTLTGHSKWITGLSWEPLHMNPECRYVASSSKDGSVRVWDTTA 237
Query: 178 KKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRD 219
+C L H VT + DG L SA +D+ + +W D
Sbjct: 238 GRCERILTGHTQSVTCLRWGGDG-LLYSASQDRTIKVWRAHD 278
Score = 181 (68.8 bits), Expect = 1.6e-10, P = 1.6e-10
Identities = 80/315 (25%), Positives = 137/315 (43%)
Query: 349 LVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALS 408
L G++E ++ + F +YLA + V+ +DLS+ + + GH VL +
Sbjct: 112 LEGHSEAVISVAF-SPTGKYLASGSGDTTVRFWDLSTETPHFTCKGHRHWVLSISWSP-- 168
Query: 409 SGKILIVTGSKDNSVRLWDSESRCCVG-VGTGHMGAVGAVAFSKKLQN----FLVSGSSD 463
GK L +G K+ + LWD + VG TGH + +++ N ++ S S D
Sbjct: 169 DGKKL-ASGCKNGQILLWDPSTGTQVGRTLTGHSKWITGLSWEPLHMNPECRYVASSSKD 227
Query: 464 HTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRL 523
+++VW D + E+ ++ H + + L D L+ + SQDRT VWR
Sbjct: 228 GSVRVW--DTTAGRCER--------ILTGHTQSVTCLRWG-GDGLLYSASQDRTIKVWRA 276
Query: 524 PDLVSVVTFRGHKRGIWSVEFSPVDQVVITAS---GDKTIKIWSISDGSCLKTFEGHTSS 580
D V T +GH + ++ S D + T + + T+ + GS LK + SS
Sbjct: 277 HDGVLCRTLQGHGHWVNTMALS-TDYALRTGAFEPAEATVNAQDLQ-GS-LKELKERASS 333
Query: 581 VLRASFLTRGA---QIVSCGADGLVKLWT-VRTGECIATYDKHEDKIWALAVGKKTEMFA 636
R + L RG ++VS D + LW+ + +A H+ I + + + A
Sbjct: 334 --RYN-LVRGQGPERLVSGSDDFTLFLWSPAEDKKPLARMTGHQALINQVLFSPDSRIVA 390
Query: 637 TGGSDALVNLWHDST 651
+ D + LW T
Sbjct: 391 SASFDKSIKLWDGRT 405
Score = 175 (66.7 bits), Expect = 7.1e-10, P = 7.1e-10
Identities = 48/176 (27%), Positives = 78/176 (44%)
Query: 41 SINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWD-LSTLKCLRSWK 99
++N DL S+K E S + ++L+ S + +W K L
Sbjct: 314 TVNAQDLQG-SLKELKERASSRYNLVRGQGPERLV-SGSDDFTLFLWSPAEDKKPLARMT 371
Query: 100 GHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKS 159
GH + P ++A+A D+ + +WD G +GH V I + D
Sbjct: 372 GHQALINQVLFSPDSRIVASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAW--SADSR 429
Query: 160 LLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLW 215
LL SGS D+T++VWD+ A+K L H V ++ + DG + S G+DK + +W
Sbjct: 430 LLVSGSSDSTLKVWDVKAQKLTTDLPGHADEVYAVDWSPDGQRVASGGKDKCLRIW 485
Score = 153 (58.9 bits), Expect = 1.8e-07, P = 1.8e-07
Identities = 66/264 (25%), Positives = 112/264 (42%)
Query: 388 CSYVLAGHSEIVLCLDTCALS-SGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGA 446
C+ L GHSE V+ + A S +GK L +GS D +VR WD + GH V +
Sbjct: 108 CTSSLEGHSEAVISV---AFSPTGKYL-ASGSGDTTVRFWDLSTETPHFTCKGHRHWVLS 163
Query: 447 VAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPND 506
+++S + L SG + I +W + + +K + G L + P
Sbjct: 164 ISWSPDGKK-LASGCKNGQILLWD-PSTGTQVGRTLTGHSKWIT---GLSWEPLHMNPEC 218
Query: 507 SLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSIS 566
V + S+D + VW GH + + + + D ++ +AS D+TIK+W
Sbjct: 219 RYVASSSKDGSVRVWDTTAGRCERILTGHTQSVTCLRWGG-DGLLYSASQDRTIKVWRAH 277
Query: 567 DGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKI--- 623
DG +T +GH V + T A + GA + TV + + + +++
Sbjct: 278 DGVLCRTLQGHGHWVNTMALSTDYA--LRTGAFEPAEA-TVNAQDLQGSLKELKERASSR 334
Query: 624 WALAVGKKTEMFATGGSDALVNLW 647
+ L G+ E +G D + LW
Sbjct: 335 YNLVRGQGPERLVSGSDDFTLFLW 358
Score = 141 (54.7 bits), Expect = 3.7e-06, P = 3.7e-06
Identities = 46/214 (21%), Positives = 89/214 (41%)
Query: 30 DGSFIACACGESINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWDL 89
DG + + +I + + + T++G + +ALS D L + E V
Sbjct: 259 DGLLYSASQDRTIKVWRAHDGVLCRTLQGHGHWVNTMALSTDYALRTGAFEPAEATVNAQ 318
Query: 90 STLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWD-VDGGFCTHYFKGHKGVVS 148
L+ K + L + D + +W + GH+ +++
Sbjct: 319 DLQGSLKELKERASSRYNLVRGQGPERLVSGSDDFTLFLWSPAEDKKPLARMTGHQALIN 378
Query: 149 SILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGR 208
+LF PD+ ++ S S D ++++WD K +A+L H + V +A ++D L+S
Sbjct: 379 QVLFSPDS--RIVASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSADSRLLVSGSS 436
Query: 209 DKVVNLWDLRDYSCKLTVPTY-EMVEAVCAIPPG 241
D + +WD++ +P + + V AV P G
Sbjct: 437 DSTLKVWDVKAQKLTTDLPGHADEVYAVDWSPDG 470
Score = 139 (54.0 bits), Expect = 6.2e-06, P = 6.2e-06
Identities = 46/170 (27%), Positives = 78/170 (45%)
Query: 489 VVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVT-FRGHKRGIWSVEFSPV 547
+V++ GK + S +V + +V Q + V+R+ + + GH + SV FSP
Sbjct: 71 IVSSLGKTLESQSVE-TEKIVDIIYQPQA--VFRVRAVTRCTSSLEGHSEAVISVAFSPT 127
Query: 548 DQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTV 607
+ + + SGD T++ W +S + T +GH VL S+ G ++ S +G + LW
Sbjct: 128 GKYLASGSGDTTVRFWDLSTETPHFTCKGHRHWVLSISWSPDGKKLASGCKNGQILLWDP 187
Query: 608 RTGECIA-TYDKHEDKI----WA-LAVGKKTEMFATGGSDALVNLWHDST 651
TG + T H I W L + + A+ D V +W D+T
Sbjct: 188 STGTQVGRTLTGHSKWITGLSWEPLHMNPECRYVASSSKDGSVRVW-DTT 236
Score = 132 (51.5 bits), Expect = 2.4e-23, Sum P(2) = 2.4e-23
Identities = 36/131 (27%), Positives = 62/131 (47%)
Query: 392 LAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSK 451
+ GH ++ + S ++ + S D S++LWD + + GH+ AV +A+S
Sbjct: 370 MTGHQALI---NQVLFSPDSRIVASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSA 426
Query: 452 KLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCT 511
LVSGSSD T+KVW D Q K + H ++ ++ +P+ V +
Sbjct: 427 D-SRLLVSGSSDSTLKVW------DVKAQ----KLTTDLPGHADEVYAVDWSPDGQRVAS 475
Query: 512 GSQDRTACVWR 522
G +D+ +WR
Sbjct: 476 GGKDKCLRIWR 486
>UNIPROTKB|Q5M786 [details] [associations]
symbol:wdr5 "WD repeat-containing protein 5" species:8364
"Xenopus (Silurana) tropicalis" [GO:0000123 "histone
acetyltransferase complex" evidence=ISS] [GO:0034968 "histone
lysine methylation" evidence=ISS] [GO:0035064 "methylated histone
residue binding" evidence=ISS] [GO:0043981 "histone H4-K5
acetylation" evidence=ISS] [GO:0043982 "histone H4-K8 acetylation"
evidence=ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISS] [GO:0071339 "MLL1 complex" evidence=ISS] [GO:0043995
"histone acetyltransferase activity (H4-K5 specific)" evidence=ISS]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=ISS] [GO:0046972 "histone acetyltransferase activity
(H4-K16 specific)" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0035064
GO:GO:0034968 GO:GO:0071339 GO:GO:0000123 GO:GO:0043981
GO:GO:0043982 GO:GO:0043984 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF EMBL:CR761006
EMBL:BC088786 RefSeq:NP_001011411.1 UniGene:Str.64944
UniGene:Str.65618 ProteinModelPortal:Q5M786 SMR:Q5M786
STRING:Q5M786 Ensembl:ENSXETT00000042368 GeneID:496891
KEGG:xtr:496891 Xenbase:XB-GENE-493883 InParanoid:Q5M786
OMA:LWDLQTK Bgee:Q5M786 Uniprot:Q5M786
Length = 334
Score = 278 (102.9 bits), Expect = 2.4e-23, P = 2.4e-23
Identities = 58/178 (32%), Positives = 91/178 (51%)
Query: 470 SFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSV 529
S + S A N K +A H K ++S+ +PN + + S D+ +W D
Sbjct: 21 SSNNQSKPAPVKPNYTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFE 80
Query: 530 VTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTR 589
T GHK GI V +S ++++AS DKT+KIW +S G CLKT +GH++ V +F +
Sbjct: 81 KTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQ 140
Query: 590 GAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLW 647
IVS D V++W V+TG+C+ T H D + A+ + + + D L +W
Sbjct: 141 SNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIW 198
Score = 271 (100.5 bits), Expect = 1.4e-22, P = 1.4e-22
Identities = 82/314 (26%), Positives = 144/314 (45%)
Query: 340 KMELILSKRLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIV 399
K L L G+ + + +KF E +LA ++ + ++++ ++GH
Sbjct: 32 KPNYTLKFTLAGHTKAVSSVKFSPNGE-WLASSSADKLIKIWGAYDGKFEKTISGHK--- 87
Query: 400 LCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVS 459
L + A SS L+V+ S D ++++WD S C+ GH V F+ + N +VS
Sbjct: 88 LGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQ-SNLIVS 146
Query: 460 GSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTAC 519
GS D ++++W D + LK + AH ++++ + SL+ + S D
Sbjct: 147 GSFDESVRIW-------DVKTGKCLKT---LPAHSDPVSAVHFNRDGSLIVSSSYDGLCR 196
Query: 520 VWRLPDLVSVVTFRGHKRGIWS-VEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHT 578
+W + T S V+FSP + ++ A+ D T+K+W S G CLKT+ H
Sbjct: 197 IWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTCHK 256
Query: 579 SS--VLRASF-LTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMF 635
+ + A+F +T G IVS D LV +W ++T E + H D + + A +
Sbjct: 257 NEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEVVQKLQGHTDVVISTACHPTENII 316
Query: 636 ATGG--SDALVNLW 647
A+ +D + LW
Sbjct: 317 ASAALENDKTIKLW 330
Score = 256 (95.2 bits), Expect = 5.7e-21, P = 5.7e-21
Identities = 61/211 (28%), Positives = 101/211 (47%)
Query: 28 SSDGSFIACACGES-INIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRV 86
S +G ++A + + I I + + TI G I+ +A S D LL S+ + +++
Sbjct: 54 SPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKI 113
Query: 87 WDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGV 146
WD+S+ KCL++ KGH +P L+ + D V +WDV G C H
Sbjct: 114 WDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDP 173
Query: 147 VSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATL-DKHFSRVTSMAITSDGSTLIS 205
VS++ H + D SL+ S S D R+WD + +C+ TL D V+ + + +G +++
Sbjct: 174 VSAV--HFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILA 231
Query: 206 AGRDKVVNLWDLRDYSCKLTVPTYEMVEAVC 236
A D + LWD C T ++ E C
Sbjct: 232 ATLDNTLKLWDYSKGKCLKTYTCHKN-EKYC 261
Score = 255 (94.8 bits), Expect = 7.3e-21, P = 7.3e-21
Identities = 54/178 (30%), Positives = 91/178 (51%)
Query: 49 NASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGM 108
N ++K T+ G + ++++ SP+ + L SS + I++W K ++ GH +
Sbjct: 34 NYTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDV 93
Query: 109 ACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDA 168
A LL +A D+ + +WDV G C KGH V F+P ++ L+ SGS D
Sbjct: 94 AWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSN--LIVSGSFDE 151
Query: 169 TVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTV 226
+VR+WD+ KC+ TL H V+++ DGS ++S+ D + +WD C T+
Sbjct: 152 SVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTL 209
Score = 188 (71.2 bits), Expect = 9.1e-12, P = 9.1e-12
Identities = 37/128 (28%), Positives = 63/128 (49%)
Query: 524 PDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLR 583
P+ T GH + + SV+FSP + + ++S DK IKIW DG KT GH +
Sbjct: 33 PNYTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISD 92
Query: 584 ASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDAL 643
++ + +VS D +K+W V +G+C+ T H + ++ ++ + +G D
Sbjct: 93 VAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDES 152
Query: 644 VNLWHDST 651
V +W T
Sbjct: 153 VRIWDVKT 160
Score = 163 (62.4 bits), Expect = 6.3e-09, P = 6.3e-09
Identities = 65/301 (21%), Positives = 123/301 (40%)
Query: 142 GHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGS 201
GH VSS+ F P+ + L S S D +++W K T+ H ++ +A +SD +
Sbjct: 43 GHTKAVSSVKFSPNGE--WLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSN 100
Query: 202 TLISAGRDKVVNLWDLRDYSCKLTVPTYEMVEAVCAIPPGS------AFDSFLSSYNQQT 255
L+SA DK + +WD+ C T+ + C P S +FD + ++ +T
Sbjct: 101 LLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKT 160
Query: 256 IKKKRRSLEIHFITVG------ERGIVRMWNADSACLYEQKSSDVTISFEMDDSKRGFTA 309
K ++L H V + ++ + D C +S + +DD +
Sbjct: 161 -GKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSF 219
Query: 310 ATVLPSNQGLLCVTADQQLLLYTTVEVPEKKMELILSKRLVGYNEEI-LDLKFLGEEEQY 368
P+ + +L T D L L+ + + K L NE+ + F ++
Sbjct: 220 VKFSPNGKYILAATLDNTLKLW---DYSKGKC---LKTYTCHKNEKYCIFANFSVTGGKW 273
Query: 369 LAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDS 428
+ + V +++L + L GH+++V+ C + I D +++LW S
Sbjct: 274 IVSGSEDNLVYIWNLQTKEVVQKLQGHTDVVIST-ACHPTENIIASAALENDKTIKLWKS 332
Query: 429 E 429
+
Sbjct: 333 D 333
Score = 136 (52.9 bits), Expect = 6.5e-06, P = 6.5e-06
Identities = 66/307 (21%), Positives = 135/307 (43%)
Query: 183 TLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYEMVEAVCAIPPGS 242
TL H V+S+ + +G L S+ DK++ +W D + T+ +++ + + S
Sbjct: 40 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKL--GISDVAWSS 97
Query: 243 AFDSFLSSYNQQTIKKKRRSLEIHFITVGE--RGIVRMWNADSACLYEQKSSDVTISFEM 300
+ +S+ + +T+K I ++ G+ + + N C + +S+ + +S
Sbjct: 98 DSNLLVSASDDKTLK-------IWDVSSGKCLKTLKGHSNYVFCCNFNPQSN-LIVSGSF 149
Query: 301 DDSKRGFTAAT-----VLPSNQGLLCVT---ADQQLLLYTTVE----VPEKKMELILSKR 348
D+S R + T LP++ + D L++ ++ + + + L
Sbjct: 150 DESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTL 209
Query: 349 LVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCL-DTCAL 407
+ N + +KF +Y+ AT ++++D S C H C+ ++
Sbjct: 210 IDDDNPPVSFVKF-SPNGKYILAATLDNTLKLWDYSKGKCLKTYTCHKNEKYCIFANFSV 268
Query: 408 SSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGS--SDHT 465
+ GK IV+GS+DN V +W+ +++ V GH V + A +N + S + +D T
Sbjct: 269 TGGK-WIVSGSEDNLVYIWNLQTKEVVQKLQGHTDVVISTA-CHPTENIIASAALENDKT 326
Query: 466 IKVWSFD 472
IK+W D
Sbjct: 327 IKLWKSD 333
Score = 132 (51.5 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 36/150 (24%), Positives = 73/150 (48%)
Query: 30 DGSFIACACGESI-NIVDLSNAS-IKSTIEGGSDTITALALSPDDKLLFSSGHSREIRVW 87
DGS I + + + I D ++ +K+ I+ + ++ + SP+ K + ++ +++W
Sbjct: 182 DGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLW 241
Query: 88 DLSTLKCLRSWKGHDGPAIGMACHPS--GGLLATAGA-DRKVLVWDVDGGFCTHYFKGHK 144
D S KCL+++ H + + S GG +G+ D V +W++ +GH
Sbjct: 242 DYSKGKCLKTYTCHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEVVQKLQGHT 301
Query: 145 GVVSSILFHPDTDKSLLFSG-SDDATVRVW 173
VV S HP T+ + + +D T+++W
Sbjct: 302 DVVISTACHP-TENIIASAALENDKTIKLW 330
>TAIR|locus:2050064 [details] [associations]
symbol:AT2G21390 species:3702 "Arabidopsis thaliana"
[GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0005215 "transporter activity" evidence=ISS] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0006888 "ER to
Golgi vesicle-mediated transport" evidence=ISS] [GO:0016192
"vesicle-mediated transport" evidence=IEA] [GO:0030117 "membrane
coat" evidence=IEA] [GO:0030126 "COPI vesicle coat"
evidence=IEA;ISS] [GO:0016020 "membrane" evidence=IDA] [GO:0080008
"Cul4-RING ubiquitin ligase complex" evidence=ISS] [GO:0005829
"cytosol" evidence=IDA] [GO:0000226 "microtubule cytoskeleton
organization" evidence=RCA] [GO:0000911 "cytokinesis by cell plate
formation" evidence=RCA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=RCA] [GO:0009853 "photorespiration"
evidence=RCA] [GO:0051788 "response to misfolded protein"
evidence=RCA] [GO:0080129 "proteasome core complex assembly"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR010714 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 Pfam:PF06957 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005829 GO:GO:0006886
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0016020 GO:GO:0016192
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005198 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:AC006841 GO:GO:0030126 HSSP:P63005
HOGENOM:HOG000195913 KO:K05236 ProtClustDB:CLSN2914500
InterPro:IPR016391 PIRSF:PIRSF003354 EMBL:AK228692 IPI:IPI00534598
PIR:F84600 RefSeq:NP_179734.1 UniGene:At.28070
ProteinModelPortal:Q9SJT9 SMR:Q9SJT9 STRING:Q9SJT9 PaxDb:Q9SJT9
PRIDE:Q9SJT9 EnsemblPlants:AT2G21390.1 GeneID:816678
KEGG:ath:AT2G21390 GeneFarm:3755 TAIR:At2g21390 InParanoid:Q9SJT9
OMA:GMENTDI PhylomeDB:Q9SJT9 Genevestigator:Q9SJT9 Uniprot:Q9SJT9
Length = 1218
Score = 206 (77.6 bits), Expect = 2.5e-23, Sum P(2) = 2.5e-23
Identities = 46/176 (26%), Positives = 81/176 (46%)
Query: 57 EGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPSGGL 116
E S+ + L+ P + +S HS I++WD + + H+GP G+ H S L
Sbjct: 6 ETKSNRVKGLSFHPKRPWILASLHSGVIQLWDYRMGTLIDRFDEHEGPVRGVHFHNSQPL 65
Query: 117 LATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLL 176
+ G D K+ VW+ C GH + ++ FH + + S SDD T+R+W+
Sbjct: 66 FVSGGDDYKIKVWNYKTHRCLFTLLGHLDYIRTVQFHHENP--WIVSASDDQTIRIWNWQ 123
Query: 177 AKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYEMV 232
++ C++ L H V + ++SA D+ V +WD+ K P +++
Sbjct: 124 SRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALKKKSASPADDLM 179
Score = 165 (63.1 bits), Expect = 3.4e-08, P = 3.4e-08
Identities = 44/164 (26%), Positives = 76/164 (46%)
Query: 377 QVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGV 436
+++V++ + C + L GH + + T IV+ S D ++R+W+ +SR C+ V
Sbjct: 74 KIKVWNYKTHRCLFTLLGHLDYIR---TVQFHHENPWIVSASDDQTIRIWNWQSRTCISV 130
Query: 437 GTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQP---------MNLK-- 485
TGH V +F K ++ +VS S D T++VW L + P MN
Sbjct: 131 LTGHNHYVMCASFHPK-EDLVVSASLDQTVRVWDIGALKKKSASPADDLMRFSQMNSDLF 189
Query: 486 ------AKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRL 523
K V+ H + +N + P L+ +G+ DR +WR+
Sbjct: 190 GGVDAIVKYVLEGHDRGVNWASFHPTLPLIVSGADDRQVKLWRM 233
Score = 154 (59.3 bits), Expect = 2.5e-23, Sum P(2) = 2.5e-23
Identities = 43/157 (27%), Positives = 78/157 (49%)
Query: 496 DINSL---AVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGI-WSVEFSPVDQVV 551
DI +L + +P D L+ SQ + + +V V GH RG+ W+ F P ++
Sbjct: 163 DIGALKKKSASPADDLM-RFSQMNSDLFGGVDAIVKYV-LEGHDRGVNWA-SFHPTLPLI 219
Query: 552 ITASGDKTIKIWSISDGSC--LKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLW--TV 607
++ + D+ +K+W +++ + T GH ++V F + IVS D +++W T
Sbjct: 220 VSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSSVMFHAKQDIIVSNSEDKSIRVWDATK 279
Query: 608 RTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALV 644
RTG I T+ + D+ W LAV + + A G + ++
Sbjct: 280 RTG--IQTFRREHDRFWILAVHPEINLLAAGHDNGMI 314
Score = 144 (55.7 bits), Expect = 6.2e-06, P = 6.2e-06
Identities = 46/190 (24%), Positives = 79/190 (41%)
Query: 458 VSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAA---HGKDINSLAVAPNDSLVCTGSQ 514
V G S H + W L Q + + ++ H + + + L +G
Sbjct: 12 VKGLSFHPKRPWILASLHSGVIQLWDYRMGTLIDRFDEHEGPVRGVHFHNSQPLFVSGGD 71
Query: 515 DRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTF 574
D VW + T GH I +V+F + +++AS D+TI+IW+ +C+
Sbjct: 72 DYKIKVWNYKTHRCLFTLLGHLDYIRTVQFHHENPWIVSASDDQTIRIWNWQSRTCISVL 131
Query: 575 EGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEM 634
GH V+ ASF + +VS D V++W + G D + + +++
Sbjct: 132 TGHNHYVMCASFHPKEDLVVSASLDQTVRVWDI--GALKKKSASPADDLMRFSQ-MNSDL 188
Query: 635 FATGGSDALV 644
F GG DA+V
Sbjct: 189 F--GGVDAIV 196
Score = 141 (54.7 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 42/181 (23%), Positives = 73/181 (40%)
Query: 423 VRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPM 482
++LWD + H G V V F Q VSG D+ IKVW++
Sbjct: 33 IQLWDYRMGTLIDRFDEHEGPVRGVHFHNS-QPLFVSGGDDYKIKVWNYK---------- 81
Query: 483 NLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSV 542
+ + H I ++ + + + S D+T +W + GH +
Sbjct: 82 THRCLFTLLGHLDYIRTVQFHHENPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCA 141
Query: 543 EFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLV 602
F P + +V++AS D+T+++W I G+ K ++R F + + G D +V
Sbjct: 142 SFHPKEDLVVSASLDQTVRVWDI--GALKKKSASPADDLMR--FSQMNSDLFG-GVDAIV 196
Query: 603 K 603
K
Sbjct: 197 K 197
Score = 141 (54.7 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 48/188 (25%), Positives = 86/188 (45%)
Query: 26 VVSSDGSFIACACGESINIVDLSNASIKSTIEGGS-DTITALALSP-DDKLLFSSGHSRE 83
V++ ++ CA + +S AS+ T+ + + SP DD + FS +S
Sbjct: 130 VLTGHNHYVMCASFHPKEDLVVS-ASLDQTVRVWDIGALKKKSASPADDLMRFSQMNSDL 188
Query: 84 IRVWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDG--GFCTHYFK 141
D L +GHD + HP+ L+ + DR+V +W ++ + +
Sbjct: 189 FGGVDAIVKYVL---EGHDRGVNWASFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLR 245
Query: 142 GHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGS 201
GH VSS++FH D ++ S S+D ++RVWD + + T + R +A+ +
Sbjct: 246 GHMNNVSSVMFHAKQD--IIVSNSEDKSIRVWDATKRTGIQTFRREHDRFWILAVHPE-I 302
Query: 202 TLISAGRD 209
L++AG D
Sbjct: 303 NLLAAGHD 310
Score = 125 (49.1 bits), Expect = 0.00069, P = 0.00069
Identities = 40/182 (21%), Positives = 82/182 (45%)
Query: 413 LIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFD 472
L V+G D +++W+ ++ C+ GH+ + V F + ++VS S D TI++W++
Sbjct: 65 LFVSGGDDYKIKVWNYKTHRCLFTLLGHLDYIRTVQFHHE-NPWIVSASDDQTIRIWNWQ 123
Query: 473 GLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRL--------- 523
+ +V+ H + + P + LV + S D+T VW +
Sbjct: 124 SRT----------CISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALKKKSAS 173
Query: 524 P--DLV--------------SVVTF--RGHKRGIWSVEFSPVDQVVITASGDKTIKIWSI 565
P DL+ ++V + GH RG+ F P ++++ + D+ +K+W +
Sbjct: 174 PADDLMRFSQMNSDLFGGVDAIVKYVLEGHDRGVNWASFHPTLPLIVSGADDRQVKLWRM 233
Query: 566 SD 567
++
Sbjct: 234 NE 235
Score = 124 (48.7 bits), Expect = 0.00088, P = 0.00088
Identities = 28/127 (22%), Positives = 51/127 (40%)
Query: 521 WRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSS 580
+R+ L+ F H+ + V F + ++ D IK+W+ CL T GH
Sbjct: 38 YRMGTLID--RFDEHEGPVRGVHFHNSQPLFVSGGDDYKIKVWNYKTHRCLFTLLGHLDY 95
Query: 581 VLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGS 640
+ F IVS D +++W ++ CI+ H + + K ++ +
Sbjct: 96 IRTVQFHHENPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASL 155
Query: 641 DALVNLW 647
D V +W
Sbjct: 156 DQTVRVW 162
Score = 99 (39.9 bits), Expect = 5.3e-12, Sum P(2) = 5.3e-12
Identities = 20/77 (25%), Positives = 38/77 (49%)
Query: 55 TIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPSG 114
T+ G D I + ++ + S+ + IR+W+ + C+ GH+ + + HP
Sbjct: 88 TLLGHLDYIRTVQFHHENPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKE 147
Query: 115 GLLATAGADRKVLVWDV 131
L+ +A D+ V VWD+
Sbjct: 148 DLVVSASLDQTVRVWDI 164
>UNIPROTKB|J9NS21 [details] [associations]
symbol:APAF1 "Apoptotic protease-activating factor 1"
species:9615 "Canis lupus familiaris" [GO:0043531 "ADP binding"
evidence=IEA] [GO:0042981 "regulation of apoptotic process"
evidence=IEA] [GO:0006952 "defense response" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] InterPro:IPR017986
InterPro:IPR000767 InterPro:IPR001315 InterPro:IPR001680
InterPro:IPR002182 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00619
Pfam:PF00931 PRINTS:PR00364 PROSITE:PS50082 PROSITE:PS50209
PROSITE:PS50294 SMART:SM00320 GO:GO:0006952 GO:GO:0042981
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043531
GO:GO:0005622 Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986
CTD:317 KO:K02084 InterPro:IPR017251 PIRSF:PIRSF037646
GeneTree:ENSGT00700000104017 EMBL:AAEX03009966
RefSeq:XP_003432082.1 ProteinModelPortal:J9NS21
Ensembl:ENSCAFT00000049144 GeneID:482620 KEGG:cfa:482620
Uniprot:J9NS21
Length = 1250
Score = 184 (69.8 bits), Expect = 4.1e-23, Sum P(2) = 4.1e-23
Identities = 51/207 (24%), Positives = 87/207 (42%)
Query: 12 CEPVLQQFYGGGPLVVSSDGSFIACACGESINIVDLSNASIKSTIEGGSDTITALALSPD 71
CEP + Y L + E IN ++ N S + + +D + S D
Sbjct: 570 CEPETSEVYQQAKLQAKQEVDH-GMLYLEWINKKNIKNLS-RLVVRPHTDAVYHACFSED 627
Query: 72 DKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDV 131
+ + S G + ++V+ T + L K H+ + A +AT D+KV +W+
Sbjct: 628 GQRIASCGVDKTLQVFKAETGEKLLEIKAHEDEVLCCAFSTDDRFIATCSVDKKVKIWNS 687
Query: 132 DGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRV 191
G H + H V+ F ++ LL + S D +++WDL K+C T+ H + V
Sbjct: 688 MTGGLVHVYDEHSEQVNCCHFTNNSHYLLLATASSDCFLKLWDLNQKECRNTMFGHTNSV 747
Query: 192 TSMAITSDGSTLISAGRDKVVNLWDLR 218
+ D L S D + LWD++
Sbjct: 748 NHCRFSPDDKLLASCSADGTLKLWDVK 774
Score = 176 (67.0 bits), Expect = 2.3e-09, P = 2.3e-09
Identities = 70/296 (23%), Positives = 131/296 (44%)
Query: 325 DQQLLLYTTVEVPEKKMELILSKRLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLS 384
D+ L ++ E EK +E+ + +E+L F +++++A + ++V++++
Sbjct: 637 DKTLQVFKA-ETGEKLLEI------KAHEDEVLCCAF-STDDRFIATCSVDKKVKIWNSM 688
Query: 385 SMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAV 444
+ +V HSE V C +S +L+ T S D ++LWD + C GH +V
Sbjct: 689 TGGLVHVYDEHSEQVNCCHFTN-NSHYLLLATASSDCFLKLWDLNQKECRNTMFGHTNSV 747
Query: 445 GAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAP 504
FS L S S+D T+K+W D S + + +N+K + + ++ + V
Sbjct: 748 NHCRFSPD-DKLLASCSADGTLKLW--DVKSANERKSINVKQFFLNSEEPQEDMEVIVK- 803
Query: 505 NDSLVCTGSQDRTACVWRLPD---LVSVVT-------FRGHKRGIWSVEFSPVDQVVITA 554
C+ S D T + + L + T GH I +FSP + + + A
Sbjct: 804 ----CCSWSADGTRIMVAAKNKIFLFDIHTGGLLAEIHTGHHSTIQYCDFSPQNHLAVVA 859
Query: 555 SGDKTIKIWSISDGSCLKTFE--GHTSSVLRASFLTRGAQIVSCGADGLVKLWTVR 608
+++W++ SCLK + GH S V F G+ ++ D ++LW +
Sbjct: 860 LSQCCVELWNMD--SCLKVADCRGHLSWVHCVMFSPDGSSFLTSSDDQTIRLWETK 913
Score = 175 (66.7 bits), Expect = 4.1e-23, Sum P(2) = 4.1e-23
Identities = 91/352 (25%), Positives = 151/352 (42%)
Query: 278 MWNADSACLYEQKSSDVTISFEMDDSKRGFTAATVLPSNQGLLCVTADQQLLLYTTVEVP 337
M++ D + + S D TI + K +A VL Q + V + ++++ +
Sbjct: 890 MFSPDGSS-FLTSSDDQTIRL-WETKKVCKNSAIVL--KQEIDVVFQENEVMVLAVDNI- 944
Query: 338 EKKMELILSKR-LVGYNEEI-LDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGH 395
K+++LI K + Y E + L QY+A V++ +L + GH
Sbjct: 945 -KRLQLINGKTGQIDYLIEAQVSCCCLSPHLQYIAFGGEDGAVEILELLNNRIFQSRIGH 1003
Query: 396 SEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQN 455
+ V + GK LI + S D+S+++W+ +S V + H V K +
Sbjct: 1004 KKTVRHIQFT--DDGKTLI-SSSDDSSIQVWNWQSEEYVFL-QAHQETVKDFKLLKNSK- 1058
Query: 456 FLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQD 515
L+S S D T+K+WS ++ E+ H + S ++P+ + + S D
Sbjct: 1059 -LLSWSFDGTVKIWSI--ITGRIEKDF--------VCHQDTVLSCDISPDATKFSSTSAD 1107
Query: 516 RTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKT--IKIWSISDGSCLKT 573
+TA +W L + RGHK + FS VD ++ A+GD I+IW++S+G L
Sbjct: 1108 KTAKIWSFELLSPLHELRGHKGCVRCSVFS-VDSTLL-ATGDDNGEIRIWNVSNGELLHL 1165
Query: 574 F------EG---HTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATY 616
EG H V F +VS G G +K W V TGE T+
Sbjct: 1166 CAPILVEEGAATHGGWVTDLCFSPDSKMLVSAG--GYLKWWNVVTGESSQTF 1215
Score = 159 (61.0 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 119/573 (20%), Positives = 228/573 (39%)
Query: 28 SSDGSFIA-CACGESINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSRE--I 84
S+D FIA C+ + + I + + + S+ + + + L + S + +
Sbjct: 667 STDDRFIATCSVDKKVKIWNSMTGGLVHVYDEHSEQVNCCHFTNNSHYLLLATASSDCFL 726
Query: 85 RVWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHK 144
++WDL+ +C + GH P LLA+ AD + +WDV +
Sbjct: 727 KLWDLNQKECRNTMFGHTNSVNHCRFSPDDKLLASCSADGTLKLWDVKSANERKSINVKQ 786
Query: 145 GVVSSILFHPDTDKSLLF---SGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGS 201
++S P D ++ S S D T R+ + AK + D H + + T S
Sbjct: 787 FFLNSE--EPQEDMEVIVKCCSWSADGT-RIM-VAAKNKIFLFDIHTGGLLAEIHTGHHS 842
Query: 202 TL------------ISAGRDKVVNLWDLRDYSCKLTVPTYEM--VEAVCAIPPGSAFDSF 247
T+ + A V LW++ D K+ + V V P GS SF
Sbjct: 843 TIQYCDFSPQNHLAVVALSQCCVELWNM-DSCLKVADCRGHLSWVHCVMFSPDGS---SF 898
Query: 248 LSSYNQQTIKK-KRRSLEIHFITVGERGIVRMWNADSACLYEQKSSDVTISFEMDDSKRG 306
L+S + QTI+ + + + + V ++ I ++ + + + D ++ + K G
Sbjct: 899 LTSSDDQTIRLWETKKVCKNSAIVLKQEIDVVFQENEVMVL---AVDNIKRLQLINGKTG 955
Query: 307 FTAATVLPSNQGLLCVTADQQLLLYT----TVEVPEKKMELILSKRLVGYNEEILDLKFL 362
++ + C++ Q + + VE+ E I R +G+ + + ++F
Sbjct: 956 -QIDYLIEAQVSCCCLSPHLQYIAFGGEDGAVEILELLNNRIFQSR-IGHKKTVRHIQFT 1013
Query: 363 GEEEQYLAVATNIEQVQVYDLSSMSCSYV-LAGHSEIVLCLDTCALSSGKILIVTGSKDN 421
++ + L +++ +QV++ S YV L H E V D L + K+L + S D
Sbjct: 1014 -DDGKTLISSSDDSSIQVWNWQSEE--YVFLQAHQETVK--DFKLLKNSKLL--SWSFDG 1066
Query: 422 SVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQP 481
+V++W + H V + S F S S+D T K+WSF+ LS +
Sbjct: 1067 TVKIWSIITGRIEKDFVCHQDTVLSCDISPDATKFS-STSADKTAKIWSFELLSP-LHEL 1124
Query: 482 MNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWS 541
K + D LA ++ + + + ++ H +
Sbjct: 1125 RGHKGCVRCSVFSVDSTLLATGDDNGEIRIWNVSNGELLHLCAPILVEEGAATHGGWVTD 1184
Query: 542 VEFSPVDQVVITASGDKTIKIWSISDGSCLKTF 574
+ FSP +++++A G +K W++ G +TF
Sbjct: 1185 LCFSPDSKMLVSAGG--YLKWWNVVTGESSQTF 1215
Score = 157 (60.3 bits), Expect = 2.5e-07, P = 2.5e-07
Identities = 46/172 (26%), Positives = 77/172 (44%)
Query: 440 HMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINS 499
H AV FS+ Q + S D T++V+ ++ E+ + +KA H ++
Sbjct: 615 HTDAVYHACFSEDGQR-IASCGVDKTLQVFK----AETGEKLLEIKA------HEDEVLC 663
Query: 500 LAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVI--TASGD 557
A + +D + T S D+ +W V + H + F+ ++ TAS D
Sbjct: 664 CAFSTDDRFIATCSVDKKVKIWNSMTGGLVHVYDEHSEQVNCCHFTNNSHYLLLATASSD 723
Query: 558 KTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRT 609
+K+W ++ C T GHT+SV F + SC ADG +KLW V++
Sbjct: 724 CFLKLWDLNQKECRNTMFGHTNSVNHCRFSPDDKLLASCSADGTLKLWDVKS 775
Score = 147 (56.8 bits), Expect = 3.0e-06, P = 3.0e-06
Identities = 33/123 (26%), Positives = 55/123 (44%)
Query: 527 VSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASF 586
+S + R H ++ FS Q + + DKT++++ G L + H VL +F
Sbjct: 607 LSRLVVRPHTDAVYHACFSEDGQRIASCGVDKTLQVFKAETGEKLLEIKAHEDEVLCCAF 666
Query: 587 LTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTE--MFATGGSDALV 644
T I +C D VK+W TG + YD+H +++ + + AT SD +
Sbjct: 667 STDDRFIATCSVDKKVKIWNSMTGGLVHVYDEHSEQVNCCHFTNNSHYLLLATASSDCFL 726
Query: 645 NLW 647
LW
Sbjct: 727 KLW 729
Score = 139 (54.0 bits), Expect = 2.3e-19, Sum P(2) = 2.3e-19
Identities = 42/233 (18%), Positives = 102/233 (43%)
Query: 415 VTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGL 474
+T S D ++RLW+++ C A+ +++ ++ + V + D +
Sbjct: 899 LTSSDDQTIRLWETKKVC----------KNSAIVLKQEIDVVF----QENEVMVLAVDNI 944
Query: 475 SDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRG 534
Q +N K + ++ ++P+ + G +D + L + + G
Sbjct: 945 K--RLQLINGKTGQIDYLIEAQVSCCCLSPHLQYIAFGGEDGAVEILELLNNRIFQSRIG 1002
Query: 535 HKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIV 594
HK+ + ++F+ + +I++S D +I++W+ + + H +V L + ++++
Sbjct: 1003 HKKTVRHIQFTDDGKTLISSSDDSSIQVWNWQSEEYV-FLQAHQETVKDFKLL-KNSKLL 1060
Query: 595 SCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLW 647
S DG VK+W++ TG + H+D + + + F++ +D +W
Sbjct: 1061 SWSFDGTVKIWSIITGRIEKDFVCHQDTVLSCDISPDATKFSSTSADKTAKIW 1113
Score = 115 (45.5 bits), Expect = 6.8e-16, Sum P(2) = 6.8e-16
Identities = 33/125 (26%), Positives = 56/125 (44%)
Query: 105 AIGMACHPSGGL-LATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFS 163
A+ AC G +A+ G D+ + V+ + G K H+ V F TD + +
Sbjct: 618 AVYHACFSEDGQRIASCGVDKTLQVFKAETGEKLLEIKAHEDEVLCCAF--STDDRFIAT 675
Query: 164 GSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLI--SAGRDKVVNLWDLRDYS 221
S D V++W+ + V D+H +V T++ L+ +A D + LWDL
Sbjct: 676 CSVDKKVKIWNSMTGGLVHVYDEHSEQVNCCHFTNNSHYLLLATASSDCFLKLWDLNQKE 735
Query: 222 CKLTV 226
C+ T+
Sbjct: 736 CRNTM 740
Score = 113 (44.8 bits), Expect = 1.2e-16, Sum P(2) = 1.2e-16
Identities = 33/158 (20%), Positives = 61/158 (38%)
Query: 493 HGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVI 552
H K + + + + + S D + VW V + H+ + + + ++
Sbjct: 1003 HKKTVRHIQFTDDGKTLISSSDDSSIQVWNWQS-EEYVFLQAHQETVKDFKLLK-NSKLL 1060
Query: 553 TASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGEC 612
+ S D T+KIWSI G K F H +VL + S AD K+W+
Sbjct: 1061 SWSFDGTVKIWSIITGRIEKDFVCHQDTVLSCDISPDATKFSSTSADKTAKIWSFELLSP 1120
Query: 613 IATYDKHEDKIWALAVGKKTEMFATGGSDALVNLWHDS 650
+ H+ + + + ATG + + +W+ S
Sbjct: 1121 LHELRGHKGCVRCSVFSVDSTLLATGDDNGEIRIWNVS 1158
Score = 100 (40.3 bits), Expect = 2.7e-15, Sum P(2) = 2.7e-15
Identities = 43/175 (24%), Positives = 74/175 (42%)
Query: 469 WSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVS 528
WSFDG + + + + H + S ++P+ + + S D+TA +W L
Sbjct: 1062 WSFDG-TVKIWSIITGRIEKDFVCHQDTVLSCDISPDATKFSSTSADKTAKIWSFELLSP 1120
Query: 529 VVTFRGHKRGIWSVEFSPVDQVVITASGDKT--IKIWSISDGSCLKTFEGHTSSVLRASF 586
+ RGHK + FS VD ++ A+GD I+IW++S+G L ++
Sbjct: 1121 LHELRGHKGCVRCSVFS-VDSTLL-ATGDDNGEIRIWNVSNGELLHLC---APILVEEGA 1175
Query: 587 LTRGAQIVS-CGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGS 640
T G + C + L V G + K W + G+ ++ F T G+
Sbjct: 1176 ATHGGWVTDLCFSPDSKML--VSAGGYL--------KWWNVVTGESSQTFYTNGT 1220
Score = 47 (21.6 bits), Expect = 7.5e-09, Sum P(2) = 7.5e-09
Identities = 15/64 (23%), Positives = 25/64 (39%)
Query: 187 HFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYEMVEAVCAIPPGSAFDS 246
H V + DG + S G DK + ++ L + +E CA S D
Sbjct: 615 HTDAVYHACFSEDGQRIASCGVDKTLQVFKAETGEKLLEIKAHEDEVLCCAF---STDDR 671
Query: 247 FLSS 250
F+++
Sbjct: 672 FIAT 675
>MGI|MGI:1306796 [details] [associations]
symbol:Apaf1 "apoptotic peptidase activating factor 1"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0001843 "neural tube closure" evidence=IMP]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005829 "cytosol" evidence=IDA;TAS]
[GO:0006309 "apoptotic DNA fragmentation" evidence=IGI] [GO:0006915
"apoptotic process" evidence=IEA] [GO:0006917 "induction of
apoptosis" evidence=ISO] [GO:0006919 "activation of cysteine-type
endopeptidase activity involved in apoptotic process"
evidence=ISO;IGI;IMP] [GO:0006952 "defense response" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IMP]
[GO:0007420 "brain development" evidence=IMP] [GO:0008635
"activation of cysteine-type endopeptidase activity involved in
apoptotic process by cytochrome c" evidence=ISO] [GO:0010659
"cardiac muscle cell apoptotic process" evidence=ISO] [GO:0010952
"positive regulation of peptidase activity" evidence=IPI]
[GO:0016505 "apoptotic protease activator activity" evidence=IPI]
[GO:0030900 "forebrain development" evidence=IMP] [GO:0031072 "heat
shock protein binding" evidence=ISO] [GO:0042802 "identical protein
binding" evidence=ISO;IPI] [GO:0042981 "regulation of apoptotic
process" evidence=IEA] [GO:0043293 "apoptosome" evidence=ISO]
[GO:0043531 "ADP binding" evidence=IEA] [GO:0051260 "protein
homooligomerization" evidence=ISO] [GO:0051402 "neuron apoptotic
process" evidence=IGI] [GO:0071560 "cellular response to
transforming growth factor beta stimulus" evidence=ISO]
InterPro:IPR017986 InterPro:IPR000767 InterPro:IPR001315
InterPro:IPR001680 InterPro:IPR002182 InterPro:IPR015943
Pfam:PF00400 Pfam:PF00619 Pfam:PF00931 PRINTS:PR00364
PROSITE:PS50082 PROSITE:PS50209 PROSITE:PS50294 SMART:SM00320
EMBL:AF064071 MGI:MGI:1306796 GO:GO:0005829 GO:GO:0005524
GO:GO:0005634 GO:GO:0005794 GO:GO:0006952 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030900 GO:GO:0051402
GO:GO:0043531 GO:GO:0006919 GO:GO:0001843 GO:GO:0006309
GO:GO:0008635 Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986
OrthoDB:EOG43TZTP GO:GO:0043293 GO:GO:0016505 CTD:317
HOVERGEN:HBG018730 KO:K02084 OMA:KVCKNSA InterPro:IPR017251
PIRSF:PIRSF037646 EMBL:BC131683 EMBL:BC131684 IPI:IPI00135366
IPI:IPI00654978 RefSeq:NP_001036023.1 RefSeq:NP_033814.2
UniGene:Mm.220289 PDB:3SFZ PDB:3SHF PDBsum:3SFZ PDBsum:3SHF
ProteinModelPortal:O88879 SMR:O88879 IntAct:O88879 STRING:O88879
PhosphoSite:O88879 PaxDb:O88879 PRIDE:O88879
Ensembl:ENSMUST00000020157 Ensembl:ENSMUST00000159110 GeneID:11783
KEGG:mmu:11783 GeneTree:ENSGT00700000104017 InParanoid:A2RRK8
ChiTaRS:APAF1 NextBio:279591 Bgee:O88879 CleanEx:MM_APAF1
Genevestigator:O88879 GermOnline:ENSMUSG00000019979 Uniprot:O88879
Length = 1249
Score = 279 (103.3 bits), Expect = 1.6e-20, P = 1.6e-20
Identities = 149/625 (23%), Positives = 265/625 (42%)
Query: 28 SSDGSFIA-CACGESINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRV 86
S DG IA C +++ + I+ D + A S DD + + +++++
Sbjct: 624 SQDGQRIASCGADKTLQVFKAETGEKLLDIKAHEDEVLCCAFSSDDSYIATCSADKKVKI 683
Query: 87 WDLSTLKCLRSWKGHDGPAIGMACHPSGG----LLATAGADRKVLVWDVDGGFCTHYFKG 142
WD +T K + ++ H CH + LLAT D + +WD++ C + G
Sbjct: 684 WDSATGKLVHTYDEHSEQV--NCCHFTNKSNHLLLATGSNDFFLKLWDLNQKECRNTMFG 741
Query: 143 HKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLD-KHF---SR-------- 190
H V+ F PD + LL S S D T+R+WD+ + +++ K F S
Sbjct: 742 HTNSVNHCRFSPDDE--LLASCSADGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEV 799
Query: 191 -VTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPT-YEMVEAVCAIPPGSAFDSF- 247
V + ++DG +I A ++KV+ L+D+ + T + C P
Sbjct: 800 IVKCCSWSADGDKIIVAAKNKVL-LFDIHTSGLLAEIHTGHHSTIQYCDFSPYDHLAVIA 858
Query: 248 LSSYNQQ--TIKKKRRSLEIHFITVGERGIVRMWNADSACLYEQKSSDVTISFEMDDSKR 305
LS Y + I + + + G+ M++ D + + S D TI + K
Sbjct: 859 LSQYCVELWNIDSRLKVADCRGHLSWVHGV--MFSPDGSS-FLTASDDQTIRV-WETKKV 914
Query: 306 GFTAATVLPSNQGLLCVTADQQLLLYTTVEVPEKKMELILSKR-LVGYNEEI-LDLKFLG 363
+A VL Q + V + + ++ + + ++LI K + Y E + L
Sbjct: 915 CKNSAIVL--KQEIDVVFQENETMVLAVDNI--RGLQLIAGKTGQIDYLPEAQVSCCCLS 970
Query: 364 EEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSV 423
+Y+A +++ +L + GH + V + A GK LI + S+D+ +
Sbjct: 971 PHLEYVAFGDEDGAIKIIELPNNRVFSSGVGHKKAVRHIQFTA--DGKTLI-SSSEDSVI 1027
Query: 424 RLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMN 483
++W+ ++ V + H V F + L+S S D T+KVW+ ++ E+
Sbjct: 1028 QVWNWQTGDYVFL-QAHQETVKD--FRLLQDSRLLSWSFDGTVKVWNV--ITGRIERDFT 1082
Query: 484 LKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVV-TFRGHKRGIWSV 542
H + S A++ + + + S D+TA +W DL+S + +GH +
Sbjct: 1083 --------CHQGTVLSCAISSDATKFSSTSADKTAKIWSF-DLLSPLHELKGHNGCVRCS 1133
Query: 543 EFSPVDQVVITASGDKT--IKIWSISDG----SC--LKTFEG---HTSSVLRASFLTRGA 591
FS +D +++ A+GD I+IW++SDG SC + EG H V F
Sbjct: 1134 AFS-LDGILL-ATGDDNGEIRIWNVSDGQLLHSCAPISVEEGTATHGGWVTDVCFSPDSK 1191
Query: 592 QIVSCGADGLVKLWTVRTGECIATY 616
+VS G G +K W V TG+ T+
Sbjct: 1192 TLVSAG--GYLKWWNVATGDSSQTF 1214
Score = 209 (78.6 bits), Expect = 5.2e-23, Sum P(2) = 5.2e-23
Identities = 56/207 (27%), Positives = 90/207 (43%)
Query: 12 CEPVLQQFYGGGPLVVSSDGSFIACACGESINIVDLSNASIKSTIEGGSDTITALALSPD 71
CEP + Y L +G E IN + N S + + +D + S D
Sbjct: 569 CEPETSEVYRQAKLQAKQEGDTGRLYL-EWINKKTIKNLS-RLVVRPHTDAVYHACFSQD 626
Query: 72 DKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDV 131
+ + S G + ++V+ T + L K H+ + A +AT AD+KV +WD
Sbjct: 627 GQRIASCGADKTLQVFKAETGEKLLDIKAHEDEVLCCAFSSDDSYIATCSADKKVKIWDS 686
Query: 132 DGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRV 191
G H + H V+ F ++ LL +GS+D +++WDL K+C T+ H + V
Sbjct: 687 ATGKLVHTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKECRNTMFGHTNSV 746
Query: 192 TSMAITSDGSTLISAGRDKVVNLWDLR 218
+ D L S D + LWD+R
Sbjct: 747 NHCRFSPDDELLASCSADGTLRLWDVR 773
Score = 174 (66.3 bits), Expect = 3.7e-09, P = 3.7e-09
Identities = 84/364 (23%), Positives = 142/364 (39%)
Query: 339 KKMELILSKRLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEI 398
KK LS+ +V + + + ++ Q +A + +QV+ + + H +
Sbjct: 600 KKTIKNLSRLVVRPHTDAVYHACFSQDGQRIASCGADKTLQVFKAETGEKLLDIKAHEDE 659
Query: 399 VLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLV 458
VLC CA SS I T S D V++WDS + V H V F+ K + L+
Sbjct: 660 VLC---CAFSSDDSYIATCSADKKVKIWDSATGKLVHTYDEHSEQVNCCHFTNKSNHLLL 716
Query: 459 S-GSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRT 517
+ GS+D +K+W D Q + + + H +N +P+D L+ + S D T
Sbjct: 717 ATGSNDFFLKLW-------DLNQK---ECRNTMFGHTNSVNHCRFSPDDELLASCSADGT 766
Query: 518 ACVWRLPDLVSVVTFRGHKRGIWSVEFSPVD-QVVI-----TASGDKTI-----KI--WS 564
+W + + KR S E P D +V++ +A GDK I K+ +
Sbjct: 767 LRLWDVRSANERKSINV-KRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAAKNKVLLFD 825
Query: 565 I-SDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKI 623
I + G + GH S++ F V + V+LW + + +A H +
Sbjct: 826 IHTSGLLAEIHTGHHSTIQYCDFSPYDHLAVIALSQYCVELWNIDSRLKVADCRGHLSWV 885
Query: 624 WALAVGKKTEMFATGGSDALVNLWHDSTXXXXXXXXXXXXXXVLRGQELENAVLDADYTK 683
+ F T D + +W V+ QE E VL D +
Sbjct: 886 HGVMFSPDGSSFLTASDDQTIRVWETKKVCKNSAIVLKQEIDVVF-QENETMVLAVDNIR 944
Query: 684 AIQV 687
+Q+
Sbjct: 945 GLQL 948
Score = 148 (57.2 bits), Expect = 5.2e-23, Sum P(2) = 5.2e-23
Identities = 33/151 (21%), Positives = 73/151 (48%)
Query: 497 INSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASG 556
++ ++P+ V G +D + LP+ + GHK+ + ++F+ + +I++S
Sbjct: 964 VSCCCLSPHLEYVAFGDEDGAIKIIELPNNRVFSSGVGHKKAVRHIQFTADGKTLISSSE 1023
Query: 557 DKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATY 616
D I++W+ G + + H +V + L + ++++S DG VK+W V TG +
Sbjct: 1024 DSVIQVWNWQTGDYV-FLQAHQETV-KDFRLLQDSRLLSWSFDGTVKVWNVITGRIERDF 1081
Query: 617 DKHEDKIWALAVGKKTEMFATGGSDALVNLW 647
H+ + + A+ F++ +D +W
Sbjct: 1082 TCHQGTVLSCAISSDATKFSSTSADKTAKIW 1112
Score = 131 (51.2 bits), Expect = 1.2e-14, Sum P(2) = 1.2e-14
Identities = 37/125 (29%), Positives = 58/125 (46%)
Query: 105 AIGMACHPSGGL-LATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFS 163
A+ AC G +A+ GAD+ + V+ + G K H+ V F +D S + +
Sbjct: 617 AVYHACFSQDGQRIASCGADKTLQVFKAETGEKLLDIKAHEDEVLCCAF--SSDDSYIAT 674
Query: 164 GSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISA--GRDKVVNLWDLRDYS 221
S D V++WD K V T D+H +V T+ + L+ A D + LWDL
Sbjct: 675 CSADKKVKIWDSATGKLVHTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKE 734
Query: 222 CKLTV 226
C+ T+
Sbjct: 735 CRNTM 739
Score = 113 (44.8 bits), Expect = 2.4e-19, Sum P(2) = 2.4e-19
Identities = 37/179 (20%), Positives = 68/179 (37%)
Query: 472 DGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVT 531
DG E P N + V H K + + + + + S+D VW V
Sbjct: 982 DGAIKIIELPNNRVFSSGVG-HKKAVRHIQFTADGKTLISSSEDSVIQVWNW-QTGDYVF 1039
Query: 532 FRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGA 591
+ H+ + D +++ S D T+K+W++ G + F H +VL + +
Sbjct: 1040 LQAHQETVKDFRLLQ-DSRLLSWSFDGTVKVWNVITGRIERDFTCHQGTVLSCAISSDAT 1098
Query: 592 QIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLWHDS 650
+ S AD K+W+ + H + A + ATG + + +W+ S
Sbjct: 1099 KFSSTSADKTAKIWSFDLLSPLHELKGHNGCVRCSAFSLDGILLATGDDNGEIRIWNVS 1157
Score = 103 (41.3 bits), Expect = 2.6e-18, Sum P(2) = 2.6e-18
Identities = 47/183 (25%), Positives = 82/183 (44%)
Query: 463 DHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWR 522
D + WSFDG + + + + H + S A++ + + + S D+TA +W
Sbjct: 1055 DSRLLSWSFDG-TVKVWNVITGRIERDFTCHQGTVLSCAISSDATKFSSTSADKTAKIWS 1113
Query: 523 LPDLVSVV-TFRGHKRGIWSVEFSPVDQVVITASGDKT--IKIWSISDGSCLKTFEGHTS 579
DL+S + +GH + FS +D +++ A+GD I+IW++SDG L +
Sbjct: 1114 F-DLLSPLHELKGHNGCVRCSAFS-LDGILL-ATGDDNGEIRIWNVSDGQLLHSCA--PI 1168
Query: 580 SVLRASFLTRGAQIVS-CGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATG 638
SV + T G + C + L V G + K W +A G ++ F T
Sbjct: 1169 SVEEGT-ATHGGWVTDVCFSPDSKTL--VSAGGYL--------KWWNVATGDSSQTFYTN 1217
Query: 639 GSD 641
G++
Sbjct: 1218 GTN 1220
Score = 96 (38.9 bits), Expect = 1.4e-17, Sum P(2) = 1.4e-17
Identities = 46/208 (22%), Positives = 91/208 (43%)
Query: 349 LVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALS 408
L + E + D + L ++ + L+ + + V+V+++ + H VL +CA+S
Sbjct: 1040 LQAHQETVKDFRLL-QDSRLLSWSFD-GTVKVWNVITGRIERDFTCHQGTVL---SCAIS 1094
Query: 409 SGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDH-TIK 467
S + S D + ++W + + GH G V AFS L L++ D+ I+
Sbjct: 1095 SDATKFSSTSADKTAKIWSFDLLSPLHELKGHNGCVRCSAFS--LDGILLATGDDNGEIR 1152
Query: 468 VWSF-DGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPND-SLVCTGSQDRTACVWRLPD 525
+W+ DG + P++++ A HG + + +P+ +LV G + W +
Sbjct: 1153 IWNVSDGQLLHSCAPISVEEGT--ATHGGWVTDVCFSPDSKTLVSAGGYLKW---WNVAT 1207
Query: 526 LVSVVTFRGHKRGIWSVEFSPVDQVVIT 553
S TF + + + SP + +T
Sbjct: 1208 GDSSQTFYTNGTNLKKIHVSPDFRTYVT 1235
Score = 54 (24.1 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 25/115 (21%), Positives = 49/115 (42%)
Query: 146 VVSSILFHPDTDK----SLLFSGSDDATVRVW-DLLAKKCVATLDK-----HFSRVTSMA 195
+V L P+T + + L + + T R++ + + KK + L + H V
Sbjct: 563 IVQLGLCEPETSEVYRQAKLQAKQEGDTGRLYLEWINKKTIKNLSRLVVRPHTDAVYHAC 622
Query: 196 ITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYEMVEAVCAIPPGSAFDSFLSS 250
+ DG + S G DK + ++ L + +E CA S+ DS++++
Sbjct: 623 FSQDGQRIASCGADKTLQVFKAETGEKLLDIKAHEDEVLCCAF---SSDDSYIAT 674
>TAIR|locus:2036823 [details] [associations]
symbol:AT1G62020 species:3702 "Arabidopsis thaliana"
[GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0005215 "transporter activity" evidence=ISS] [GO:0005622
"intracellular" evidence=IEA] [GO:0006886 "intracellular protein
transport" evidence=IEA] [GO:0006888 "ER to Golgi vesicle-mediated
transport" evidence=ISS] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0030126 "COPI vesicle coat" evidence=ISS]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0016020 "membrane"
evidence=IDA] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] [GO:0005829 "cytosol" evidence=IDA] [GO:0009630
"gravitropism" evidence=RCA] [GO:0030244 "cellulose biosynthetic
process" evidence=RCA] [GO:0048193 "Golgi vesicle transport"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR010714 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 Pfam:PF06957 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005829 GO:GO:0005886 GO:GO:0006886
GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005198 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0030126 EMBL:AC004392 EMBL:AY050400
EMBL:BT001048 IPI:IPI00528095 PIR:T02146 RefSeq:NP_176393.1
UniGene:At.48329 ProteinModelPortal:Q94A40 SMR:Q94A40 IntAct:Q94A40
STRING:Q94A40 PaxDb:Q94A40 PRIDE:Q94A40 EnsemblPlants:AT1G62020.1
GeneID:842497 KEGG:ath:AT1G62020 GeneFarm:2989 TAIR:At1g62020
HOGENOM:HOG000195913 InParanoid:Q94A40 KO:K05236 OMA:PLAADHI
PhylomeDB:Q94A40 ProtClustDB:CLSN2914500 Genevestigator:Q94A40
InterPro:IPR016391 PIRSF:PIRSF003354 Uniprot:Q94A40
Length = 1216
Score = 206 (77.6 bits), Expect = 6.4e-23, Sum P(2) = 6.4e-23
Identities = 47/176 (26%), Positives = 81/176 (46%)
Query: 57 EGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPSGGL 116
E S+ + L+ P + +S HS I++WD + + H+GP G+ H S L
Sbjct: 6 ETKSNRVKGLSFHPKRPWILASLHSGVIQLWDYRMGTLIDRFDEHEGPVRGVHFHNSQPL 65
Query: 117 LATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLL 176
+ G D K+ VW+ C GH + ++ FH + + S SDD T+R+W+
Sbjct: 66 FVSGGDDYKIKVWNYKNHRCLFTLLGHLDYIRTVQFHHEYP--WIVSASDDQTIRIWNWQ 123
Query: 177 AKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYEMV 232
++ CV+ L H V + ++SA D+ V +WD+ K P +++
Sbjct: 124 SRTCVSVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALRKKTVSPADDIM 179
Score = 165 (63.1 bits), Expect = 3.4e-08, P = 3.4e-08
Identities = 47/164 (28%), Positives = 78/164 (47%)
Query: 377 QVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGV 436
+++V++ + C + L GH + + T IV+ S D ++R+W+ +SR CV V
Sbjct: 74 KIKVWNYKNHRCLFTLLGHLDYIR---TVQFHHEYPWIVSASDDQTIRIWNWQSRTCVSV 130
Query: 437 GTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGL-------SDDAEQ--PMNLK-- 485
TGH V +F K ++ +VS S D T++VW L +DD + MN
Sbjct: 131 LTGHNHYVMCASFHPK-EDLVVSASLDQTVRVWDIGALRKKTVSPADDIMRLTQMNSDLF 189
Query: 486 ------AKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRL 523
K V+ H + +N A P L+ +G+ DR +WR+
Sbjct: 190 GGVDAIVKYVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRM 233
Score = 150 (57.9 bits), Expect = 6.4e-23, Sum P(2) = 6.4e-23
Identities = 33/125 (26%), Positives = 62/125 (49%)
Query: 525 DLVSVVTFRGHKRGI-WSVEFSPVDQVVITASGDKTIKIWSISDGSC--LKTFEGHTSSV 581
D + GH RG+ W+ F P ++++ + D+ +K+W +++ + T GH ++V
Sbjct: 193 DAIVKYVLEGHDRGVNWAA-FHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNV 251
Query: 582 LRASFLTRGAQIVSCGADGLVKLW--TVRTGECIATYDKHEDKIWALAVGKKTEMFATGG 639
F + IVS D +++W T RTG + T+ + D+ W LAV + + A G
Sbjct: 252 SSVMFHAKQDIIVSNSEDKSIRVWDATKRTG--LQTFRREHDRFWILAVHPEMNLLAAGH 309
Query: 640 SDALV 644
++
Sbjct: 310 DSGMI 314
Score = 146 (56.5 bits), Expect = 3.8e-06, P = 3.8e-06
Identities = 45/181 (24%), Positives = 74/181 (40%)
Query: 423 VRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPM 482
++LWD + H G V V F Q VSG D+ IKVW++
Sbjct: 33 IQLWDYRMGTLIDRFDEHEGPVRGVHFHNS-QPLFVSGGDDYKIKVWNYK---------- 81
Query: 483 NLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSV 542
N + + H I ++ + + S D+T +W V GH +
Sbjct: 82 NHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCVSVLTGHNHYVMCA 141
Query: 543 EFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLV 602
F P + +V++AS D+T+++W I G+ K ++R LT+ + G D +V
Sbjct: 142 SFHPKEDLVVSASLDQTVRVWDI--GALRKKTVSPADDIMR---LTQMNSDLFGGVDAIV 196
Query: 603 K 603
K
Sbjct: 197 K 197
Score = 145 (56.1 bits), Expect = 4.8e-06, P = 4.8e-06
Identities = 48/190 (25%), Positives = 79/190 (41%)
Query: 458 VSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAA---HGKDINSLAVAPNDSLVCTGSQ 514
V G S H + W L Q + + ++ H + + + L +G
Sbjct: 12 VKGLSFHPKRPWILASLHSGVIQLWDYRMGTLIDRFDEHEGPVRGVHFHNSQPLFVSGGD 71
Query: 515 DRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTF 574
D VW + + T GH I +V+F +++AS D+TI+IW+ +C+
Sbjct: 72 DYKIKVWNYKNHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCVSVL 131
Query: 575 EGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEM 634
GH V+ ASF + +VS D V++W + G D I L +++
Sbjct: 132 TGHNHYVMCASFHPKEDLVVSASLDQTVRVWDI--GALRKKTVSPADDIMRLTQ-MNSDL 188
Query: 635 FATGGSDALV 644
F GG DA+V
Sbjct: 189 F--GGVDAIV 196
Score = 138 (53.6 bits), Expect = 2.7e-05, P = 2.7e-05
Identities = 33/113 (29%), Positives = 58/113 (51%)
Query: 99 KGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDG--GFCTHYFKGHKGVVSSILFHPDT 156
+GHD A HP+ L+ + DR+V +W ++ + +GH VSS++FH
Sbjct: 201 EGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSSVMFHAKQ 260
Query: 157 DKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRD 209
D ++ S S+D ++RVWD + + T + R +A+ + L++AG D
Sbjct: 261 D--IIVSNSEDKSIRVWDATKRTGLQTFRREHDRFWILAVHPE-MNLLAAGHD 310
Score = 124 (48.7 bits), Expect = 0.00088, P = 0.00088
Identities = 40/182 (21%), Positives = 80/182 (43%)
Query: 413 LIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFD 472
L V+G D +++W+ ++ C+ GH+ + V F + ++VS S D TI++W++
Sbjct: 65 LFVSGGDDYKIKVWNYKNHRCLFTLLGHLDYIRTVQFHHEYP-WIVSASDDQTIRIWNWQ 123
Query: 473 GLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVW----------- 521
+ +V+ H + + P + LV + S D+T VW
Sbjct: 124 SRT----------CVSVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALRKKTVS 173
Query: 522 ------RLPDLVS--------VVTF--RGHKRGIWSVEFSPVDQVVITASGDKTIKIWSI 565
RL + S +V + GH RG+ F P ++++ + D+ +K+W +
Sbjct: 174 PADDIMRLTQMNSDLFGGVDAIVKYVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRM 233
Query: 566 SD 567
++
Sbjct: 234 NE 235
Score = 100 (40.3 bits), Expect = 1.1e-11, Sum P(2) = 1.1e-11
Identities = 27/113 (23%), Positives = 48/113 (42%)
Query: 19 FYGGGPLVVSSDGSFIACACGESINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSS 78
F+ PL VS + I + + N T+ G D I + + + S+
Sbjct: 59 FHNSQPLFVSGGDDY-------KIKVWNYKNHRCLFTLLGHLDYIRTVQFHHEYPWIVSA 111
Query: 79 GHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDV 131
+ IR+W+ + C+ GH+ + + HP L+ +A D+ V VWD+
Sbjct: 112 SDDQTIRIWNWQSRTCVSVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDI 164
>FB|FBgn0025725 [details] [associations]
symbol:alphaCop "alpha-coatomer protein" species:7227
"Drosophila melanogaster" [GO:0006890 "retrograde vesicle-mediated
transport, Golgi to ER" evidence=ISS;NAS] [GO:0030126 "COPI vesicle
coat" evidence=ISS;NAS] [GO:0016192 "vesicle-mediated transport"
evidence=NAS] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0005198 "structural molecule activity"
evidence=IEA] [GO:0006911 "phagocytosis, engulfment" evidence=IMP]
[GO:0048812 "neuron projection morphogenesis" evidence=IMP]
[GO:0010883 "regulation of lipid storage" evidence=IDA] [GO:0000902
"cell morphogenesis" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR010714
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053 Pfam:PF06957
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0006886
GO:GO:0006911 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005198 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0000902 GO:GO:0030126 GO:GO:0010883
InterPro:IPR016391 PIRSF:PIRSF003354 EMBL:AJ011114
ProteinModelPortal:O77285 SMR:O77285 STRING:O77285 PaxDb:O77285
PRIDE:O77285 FlyBase:FBgn0025725 InParanoid:O77285
OrthoDB:EOG4CFXQ2 ChiTaRS:alphaCop ArrayExpress:O77285 Bgee:O77285
Uniprot:O77285
Length = 1234
Score = 209 (78.6 bits), Expect = 6.5e-23, Sum P(2) = 6.5e-23
Identities = 48/174 (27%), Positives = 74/174 (42%)
Query: 54 STIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPS 113
+ E S + L+ P + S HS I++WD L + HDGP G+A H
Sbjct: 3 TNFESKSARVKGLSFHPKRPWILVSLHSGVIQLWDYRMHTLLEKFDEHDGPVRGVAFHQQ 62
Query: 114 GGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVW 173
L + G D K+ VW+ C H V ++ FH + + S SDD T+R+W
Sbjct: 63 MPLFVSGGDDYKIKVWNYKQRRCIFTLLAHLDYVRTVAFHHEYP--WILSASDDQTIRIW 120
Query: 174 DLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVP 227
+ ++ C+ L H V ++SA D+ V +WD+ K P
Sbjct: 121 NWQSRNCICVLTGHNHYVMCAQFHPTEDQIVSASLDQTVRVWDISGLRKKNVAP 174
Score = 148 (57.2 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 36/144 (25%), Positives = 65/144 (45%)
Query: 423 VRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPM 482
++LWD + H G V VAF +++ F VSG D+ IKVW++
Sbjct: 33 IQLWDYRMHTLLEKFDEHDGPVRGVAFHQQMPLF-VSGGDDYKIKVWNYK---------- 81
Query: 483 NLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSV 542
+ + AH + ++A + + S D+T +W + GH +
Sbjct: 82 QRRCIFTLLAHLDYVRTVAFHHEYPWILSASDDQTIRIWNWQSRNCICVLTGHNHYVMCA 141
Query: 543 EFSPVDQVVITASGDKTIKIWSIS 566
+F P + +++AS D+T+++W IS
Sbjct: 142 QFHPTEDQIVSASLDQTVRVWDIS 165
Score = 147 (56.8 bits), Expect = 6.5e-23, Sum P(2) = 6.5e-23
Identities = 31/123 (25%), Positives = 59/123 (47%)
Query: 525 DLVSVVTFRGHKRGI-WSVEFSPVDQVVITASGDKTIKIWSISDGSC--LKTFEGHTSSV 581
D V GH RG W+ F P ++++ + D+ +K+W +++ + T GH ++V
Sbjct: 197 DAVVKHVLEGHDRGFNWA-SFHPTLPLIVSGADDRLVKLWRMNEYKAWEVDTCRGHYNNV 255
Query: 582 LRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSD 641
F R I+S G D +++W + +C+ T+ + ++ W L +FA G
Sbjct: 256 SSVLFHPRQDLILSNGEDRSIRVWDMTKRQCLFTFRRDNERFWILTAHPTLNLFAAGHDG 315
Query: 642 ALV 644
+V
Sbjct: 316 GMV 318
Score = 139 (54.0 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 48/188 (25%), Positives = 80/188 (42%)
Query: 40 ESINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWK 99
++I I + + + + G + + P + + S+ + +RVWD+S L R
Sbjct: 115 QTIRIWNWQSRNCICVLTGHNHYVMCAQFHPTEDQIVSASLDQTVRVWDISGL---RKKN 171
Query: 100 GHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKS 159
GP G+ H G AT D L D H +GH + FHP
Sbjct: 172 VAPGPG-GLDDHLKGHPGAT---D---LFGQADA-VVKHVLEGHDRGFNWASFHPTLP-- 221
Query: 160 LLFSGSDDATVRVWDLLAKKC--VATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDL 217
L+ SG+DD V++W + K V T H++ V+S+ ++S G D+ + +WD+
Sbjct: 222 LIVSGADDRLVKLWRMNEYKAWEVDTCRGHYNNVSSVLFHPRQDLILSNGEDRSIRVWDM 281
Query: 218 RDYSCKLT 225
C T
Sbjct: 282 TKRQCLFT 289
Score = 136 (52.9 bits), Expect = 4.6e-05, P = 4.6e-05
Identities = 35/114 (30%), Positives = 59/114 (51%)
Query: 99 KGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDG--GFCTHYFKGHKGVVSSILFHPDT 156
+GHD + HP+ L+ + DR V +W ++ + +GH VSS+LFHP
Sbjct: 205 EGHDRGFNWASFHPTLPLIVSGADDRLVKLWRMNEYKAWEVDTCRGHYNNVSSVLFHPRQ 264
Query: 157 DKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGS-TLISAGRD 209
D L+ S +D ++RVWD+ ++C+ T + R +T+ + L +AG D
Sbjct: 265 D--LILSNGEDRSIRVWDMTKRQCLFTFRRDNERF--WILTAHPTLNLFAAGHD 314
Score = 133 (51.9 bits), Expect = 9.6e-05, P = 9.6e-05
Identities = 38/153 (24%), Positives = 61/153 (39%)
Query: 458 VSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAA---HGKDINSLAVAPNDSLVCTGSQ 514
V G S H + W L Q + + ++ H + +A L +G
Sbjct: 12 VKGLSFHPKRPWILVSLHSGVIQLWDYRMHTLLEKFDEHDGPVRGVAFHQQMPLFVSGGD 71
Query: 515 DRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTF 574
D VW + T H + +V F +++AS D+TI+IW+ +C+
Sbjct: 72 DYKIKVWNYKQRRCIFTLLAHLDYVRTVAFHHEYPWILSASDDQTIRIWNWQSRNCICVL 131
Query: 575 EGHTSSVLRASFLTRGAQIVSCGADGLVKLWTV 607
GH V+ A F QIVS D V++W +
Sbjct: 132 TGHNHYVMCAQFHPTEDQIVSASLDQTVRVWDI 164
Score = 131 (51.2 bits), Expect = 3.0e-21, Sum P(2) = 3.0e-21
Identities = 27/90 (30%), Positives = 48/90 (53%)
Query: 487 KAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVS--VVTFRGHKRGIWSVEF 544
K V+ H + N + P L+ +G+ DR +WR+ + + V T RGH + SV F
Sbjct: 201 KHVLEGHDRGFNWASFHPTLPLIVSGADDRLVKLWRMNEYKAWEVDTCRGHYNNVSSVLF 260
Query: 545 SPVDQVVITASGDKTIKIWSISDGSCLKTF 574
P ++++ D++I++W ++ CL TF
Sbjct: 261 HPRQDLILSNGEDRSIRVWDMTKRQCLFTF 290
Score = 127 (49.8 bits), Expect = 3.8e-14, Sum P(2) = 3.8e-14
Identities = 30/98 (30%), Positives = 50/98 (51%)
Query: 377 QVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGV 436
+++V++ C + L H + V T A I++ S D ++R+W+ +SR C+ V
Sbjct: 74 KIKVWNYKQRRCIFTLLAHLDYVR---TVAFHHEYPWILSASDDQTIRIWNWQSRNCICV 130
Query: 437 GTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGL 474
TGH V F ++ +VS S D T++VW GL
Sbjct: 131 LTGHNHYVMCAQFHPT-EDQIVSASLDQTVRVWDISGL 167
Score = 111 (44.1 bits), Expect = 1.7e-12, Sum P(2) = 1.7e-12
Identities = 29/114 (25%), Positives = 52/114 (45%)
Query: 413 LIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFD 472
L V+G D +++W+ + R C+ H+ V VAF + +++S S D TI++W++
Sbjct: 65 LFVSGGDDYKIKVWNYKQRRCIFTLLAHLDYVRTVAFHHEYP-WILSASDDQTIRIWNW- 122
Query: 473 GLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDL 526
Q N V+ H + P + + + S D+T VW + L
Sbjct: 123 -------QSRN--CICVLTGHNHYVMCAQFHPTEDQIVSASLDQTVRVWDISGL 167
Score = 85 (35.0 bits), Expect = 1.9e-16, Sum P(2) = 1.9e-16
Identities = 21/59 (35%), Positives = 31/59 (52%)
Query: 413 LIVTGSKDNSVRLWDSESRCCVGVGT--GHMGAVGAVAFSKKLQNFLVSGSSDHTIKVW 469
LIV+G+ D V+LW V T GH V +V F + Q+ ++S D +I+VW
Sbjct: 222 LIVSGADDRLVKLWRMNEYKAWEVDTCRGHYNNVSSVLFHPR-QDLILSNGEDRSIRVW 279
Score = 84 (34.6 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 18/63 (28%), Positives = 35/63 (55%)
Query: 365 EEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVR 424
E ++ A++ + +++++ S +C VL GH+ V+C + IV+ S D +VR
Sbjct: 104 EYPWILSASDDQTIRIWNWQSRNCICVLTGHNHYVMCAQ---FHPTEDQIVSASLDQTVR 160
Query: 425 LWD 427
+WD
Sbjct: 161 VWD 163
Score = 80 (33.2 bits), Expect = 6.2e-16, Sum P(2) = 6.2e-16
Identities = 26/110 (23%), Positives = 43/110 (39%)
Query: 439 GHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHG--KD 496
GH +F L +VSG+ D +K+W + KA V G +
Sbjct: 206 GHDRGFNWASFHPTLP-LIVSGADDRLVKLWRMN----------EYKAWEVDTCRGHYNN 254
Query: 497 INSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSP 546
++S+ P L+ + +DR+ VW + + TFR W + P
Sbjct: 255 VSSVLFHPRQDLILSNGEDRSIRVWDMTKRQCLFTFRRDNERFWILTAHP 304
Score = 57 (25.1 bits), Expect = 1.5e-13, Sum P(2) = 1.5e-13
Identities = 9/22 (40%), Positives = 15/22 (68%)
Query: 413 LIVTGSKDNSVRLWDSESRCCV 434
LI++ +D S+R+WD R C+
Sbjct: 266 LILSNGEDRSIRVWDMTKRQCL 287
>UNIPROTKB|E1BS49 [details] [associations]
symbol:APAF1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0006952 "defense response" evidence=IEA] [GO:0043531
"ADP binding" evidence=IEA] [GO:0001843 "neural tube closure"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005794
"Golgi apparatus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0006309 "apoptotic DNA fragmentation" evidence=IEA] [GO:0008635
"activation of cysteine-type endopeptidase activity involved in
apoptotic process by cytochrome c" evidence=IEA] [GO:0016505
"apoptotic protease activator activity" evidence=IEA] [GO:0030900
"forebrain development" evidence=IEA] [GO:0042802 "identical
protein binding" evidence=IEA] [GO:0051402 "neuron apoptotic
process" evidence=IEA] InterPro:IPR017986 InterPro:IPR000767
InterPro:IPR001315 InterPro:IPR001680 InterPro:IPR002182
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00619 Pfam:PF00931
PRINTS:PR00364 PROSITE:PS50082 PROSITE:PS50209 PROSITE:PS50294
SMART:SM00114 SMART:SM00320 GO:GO:0005634 GO:GO:0005794
GO:GO:0006952 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051402
GO:GO:0043531 GO:GO:0006309 GO:GO:0008635 Gene3D:1.10.533.10
InterPro:IPR011029 SUPFAM:SSF47986 GO:GO:0043293 GO:GO:0016505
OMA:KVCKNSA GeneTree:ENSGT00700000104017 EMBL:AADN02005970
IPI:IPI00822148 ProteinModelPortal:E1BS49
Ensembl:ENSGALT00000038230 ArrayExpress:E1BS49 Uniprot:E1BS49
Length = 1254
Score = 182 (69.1 bits), Expect = 5.1e-10, P = 5.1e-10
Identities = 46/171 (26%), Positives = 79/171 (46%)
Query: 56 IEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPSGG 115
++G + I A + KLL S ++VW+++T K + + H G + A P G
Sbjct: 1046 LKGHKEAIKDFAFLENSKLL-SWSFDGTVKVWNITTGKTEKDFACHRGAVLSCAVSPDGS 1104
Query: 116 LLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDL 175
++ AD+ +W + H KGH+ V F P LL +G D +R+WD+
Sbjct: 1105 RFSSTSADKTAKIWSFESSSVLHELKGHEACVRCSAFSPSN--KLLATGDDKGDIRIWDI 1162
Query: 176 LAKK----CVA-TLDK----HFSRVTSMAITSDGSTLISAGRDKVVNLWDL 217
L + C + T+D+ H VT ++ + D L+S+G + WD+
Sbjct: 1163 LTGELLHFCSSVTVDEEEPTHGGWVTDLSFSPDSKMLVSSGG--YLKWWDV 1211
Score = 179 (68.1 bits), Expect = 6.5e-23, Sum P(3) = 6.5e-23
Identities = 63/243 (25%), Positives = 108/243 (44%)
Query: 405 CALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNF-LVSGSSD 463
C ++ +++ + D +++W+ + CV + GH A+ AF L+N L+S S D
Sbjct: 1015 CRFTTDCQTLISSAHDAVIQVWNWQLNECVFL-KGHKEAIKDFAF---LENSKLLSWSFD 1070
Query: 464 HTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRL 523
T+KVW+ K + A H + S AV+P+ S + S D+TA +W
Sbjct: 1071 GTVKVWNIT----------TGKTEKDFACHRGAVLSCAVSPDGSRFSSTSADKTAKIWSF 1120
Query: 524 PDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLK-----TFEG-- 576
+ +GH+ + FSP ++++ T I+IW I G L T +
Sbjct: 1121 ESSSVLHELKGHEACVRCSAFSPSNKLLATGDDKGDIRIWDILTGELLHFCSSVTVDEEE 1180
Query: 577 --HTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEM 634
H V SF +VS G G +K W V TGE + T+ + + ++ V ++
Sbjct: 1181 PTHGGWVTDLSFSPDSKMLVSSG--GYLKWWDVTTGESLQTFYTNGTNLKSIHVSPNFDV 1238
Query: 635 FAT 637
+ T
Sbjct: 1239 YVT 1241
Score = 168 (64.2 bits), Expect = 6.5e-23, Sum P(3) = 6.5e-23
Identities = 53/211 (25%), Positives = 90/211 (42%)
Query: 12 CEPVLQQFYGGGPLVVSSD-GSFIACACGESINIVDLSNASIKSTIEGGSDTITALALSP 70
C+P + Y L + G+F E IN L N S + + D + S
Sbjct: 570 CQPETSEVYQQAKLRAQRETGTFYL----EWINKKSLKNLS-RLVVRPHRDAVYHACFSR 624
Query: 71 DDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWD 130
D + + S G + ++V+ + + L HD + +AT AD+KV +W+
Sbjct: 625 DRQRIASCGADKTLQVFKAESGERLLEISAHDDEILCCTFSADDKYVATCSADKKVKIWN 684
Query: 131 VDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDA----TVRVWDLLAKKCVATLDK 186
G C + ++ H V+ F+ + LL + SDD TV++WDL K C T+
Sbjct: 685 SRTGKCLYVYEEHTEQVNCCQFNNRRGQYLLATCSDDTYIKNTVQLWDLKDKYCRNTMFG 744
Query: 187 HFSRVTSMAITSDGSTLISAGRDKVVNLWDL 217
H + V+ + + + S D V LW++
Sbjct: 745 HVNAVSHCRFSPNDDYIASCSTDGTVKLWNV 775
Score = 152 (58.6 bits), Expect = 8.8e-07, P = 8.8e-07
Identities = 44/172 (25%), Positives = 71/172 (41%)
Query: 483 NLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSV 542
NL ++ VV H + + + + + D+T V++ ++ H I
Sbjct: 604 NL-SRLVVRPHRDAVYHACFSRDRQRIASCGADKTLQVFKAESGERLLEISAHDDEILCC 662
Query: 543 EFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQ--IVSCGADG 600
FS D+ V T S DK +KIW+ G CL +E HT V F R Q + +C D
Sbjct: 663 TFSADDKYVATCSADKKVKIWNSRTGKCLYVYEEHTEQVNCCQFNNRRGQYLLATCSDDT 722
Query: 601 LVK----LWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLWH 648
+K LW ++ C T H + + + A+ +D V LW+
Sbjct: 723 YIKNTVQLWDLKDKYCRNTMFGHVNAVSHCRFSPNDDYIASCSTDGTVKLWN 774
Score = 151 (58.2 bits), Expect = 7.0e-19, Sum P(2) = 7.0e-19
Identities = 63/297 (21%), Positives = 123/297 (41%)
Query: 321 CVTADQQLLLYTTVEVPEKKMELILSKRLVGYNEEIL--DLKFLGEEEQYLAVAT-NIEQ 377
CVT L+ T ++ + + + ++ ++ +L +L + + + +A N +
Sbjct: 890 CVTFSSDGSLFLTSS-EDQTIRIWETNKVCKSSDAVLKSELDVVFHNGEVMILAIYNQKH 948
Query: 378 VQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVG 437
+Q+ + ++ S ++ C C LS G ++ ++++ +
Sbjct: 949 IQLINGNTDSIIMQTEPQESLICC---CCLSEDLKFAAFGQENGAIKVLRLLDGRVLTSR 1005
Query: 438 TGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDI 497
+ +V F+ Q L+S + D I+VW++ L + H + I
Sbjct: 1006 EAYRTSVQHCRFTTDCQT-LISSAHDAVIQVWNWQ-----------LNECVFLKGHKEAI 1053
Query: 498 NSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGD 557
A N L+ + S D T VW + + F H+ + S SP + S D
Sbjct: 1054 KDFAFLENSKLL-SWSFDGTVKVWNITTGKTEKDFACHRGAVLSCAVSPDGSRFSSTSAD 1112
Query: 558 KTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGAD-GLVKLWTVRTGECI 613
KT KIWS S L +GH + V R S + ++++ G D G +++W + TGE +
Sbjct: 1113 KTAKIWSFESSSVLHELKGHEACV-RCSAFSPSNKLLATGDDKGDIRIWDILTGELL 1168
Score = 151 (58.2 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 45/184 (24%), Positives = 78/184 (42%)
Query: 440 HMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINS 499
H AV FS+ Q + S +D T++V+ ++ E+ + ++AH +I
Sbjct: 613 HRDAVYHACFSRDRQR-IASCGADKTLQVFK----AESGERLLE------ISAHDDEILC 661
Query: 500 LAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPV--DQVVITASGD 557
+ +D V T S D+ +W + + H + +F+ ++ T S D
Sbjct: 662 CTFSADDKYVATCSADKKVKIWNSRTGKCLYVYEEHTEQVNCCQFNNRRGQYLLATCSDD 721
Query: 558 ----KTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECI 613
T+++W + D C T GH ++V F I SC DG VKLW V + +
Sbjct: 722 TYIKNTVQLWDLKDKYCRNTMFGHVNAVSHCRFSPNDDYIASCSTDGTVKLWNVHSANEL 781
Query: 614 ATYD 617
T +
Sbjct: 782 RTIE 785
Score = 145 (56.1 bits), Expect = 5.0e-06, P = 5.0e-06
Identities = 46/178 (25%), Positives = 79/178 (44%)
Query: 41 SINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKG 100
+I ++ L + + ++ E ++ + D + L SS H I+VW+ +C+ KG
Sbjct: 990 AIKVLRLLDGRVLTSREAYRTSVQHCRFTTDCQTLISSAHDAVIQVWNWQLNECV-FLKG 1048
Query: 101 HDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSL 160
H A + LL+ + D V VW++ G F H+G V S PD +
Sbjct: 1049 HKEAIKDFAFLENSKLLSWS-FDGTVKVWNITTGKTEKDFACHRGAVLSCAVSPDGSR-- 1105
Query: 161 LFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKV-VNLWDL 217
S S D T ++W + + L H + V A S + L++ G DK + +WD+
Sbjct: 1106 FSSTSADKTAKIWSFESSSVLHELKGHEACVRCSAF-SPSNKLLATGDDKGDIRIWDI 1162
Score = 143 (55.4 bits), Expect = 3.8e-19, Sum P(3) = 3.8e-19
Identities = 35/137 (25%), Positives = 59/137 (43%)
Query: 511 TGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSC 570
+ + D VW L V +GHK I F + +++ S D T+K+W+I+ G
Sbjct: 1026 SSAHDAVIQVWNW-QLNECVFLKGHKEAIKDFAFLE-NSKLLSWSFDGTVKVWNITTGKT 1083
Query: 571 LKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGK 630
K F H +VL + G++ S AD K+W+ + + HE + A
Sbjct: 1084 EKDFACHRGAVLSCAVSPDGSRFSSTSADKTAKIWSFESSSVLHELKGHEACVRCSAFSP 1143
Query: 631 KTEMFATGGSDALVNLW 647
++ ATG + +W
Sbjct: 1144 SNKLLATGDDKGDIRIW 1160
Score = 133 (51.9 bits), Expect = 9.8e-05, P = 9.8e-05
Identities = 49/201 (24%), Positives = 74/201 (36%)
Query: 42 INIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGH 101
I +++ + SI E I LS D K + I+V L + L S + +
Sbjct: 949 IQLINGNTDSIIMQTEPQESLICCCCLSEDLKFAAFGQENGAIKVLRLLDGRVLTSREAY 1008
Query: 102 DGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLL 161
L ++ D + VW+ C + KGHK + F + S L
Sbjct: 1009 RTSVQHCRFTTDCQTLISSAHDAVIQVWNWQLNECV-FLKGHKEAIKDFAF---LENSKL 1064
Query: 162 FSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYS 221
S S D TV+VW++ K H V S A++ DGS S DK +W S
Sbjct: 1065 LSWSFDGTVKVWNITTGKTEKDFACHRGAVLSCAVSPDGSRFSSTSADKTAKIWSFESSS 1124
Query: 222 CKLTVPTYEMVEAVCAIPPGS 242
+ +E A P +
Sbjct: 1125 VLHELKGHEACVRCSAFSPSN 1145
Score = 132 (51.5 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 76/341 (22%), Positives = 126/341 (36%)
Query: 319 LLCVT--ADQQLLLYTTVEVPEKKMELILSKRLVGYNE---EILDLKFLGEEEQYLAVA- 372
+LC T AD + + + + K K L Y E ++ +F QYL
Sbjct: 659 ILCCTFSADDKYVATCSADKKVKIWNSRTGKCLYVYEEHTEQVNCCQFNNRRGQYLLATC 718
Query: 373 ---TNIEQ-VQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDS 428
T I+ VQ++DL C + GH V + C S I + S D +V+LW+
Sbjct: 719 SDDTYIKNTVQLWDLKDKYCRNTMFGH---VNAVSHCRFSPNDDYIASCSTDGTVKLWNV 775
Query: 429 ESRC---CVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLK 485
S + + A + L S TI V + + L NL
Sbjct: 776 HSANELRTIEIKDFFRNADEQQDDVEVLVKCCSWSRSSDTILVVAKNKLLLFDVTTSNLL 835
Query: 486 AKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFS 545
+ +++ H I D LV + +W + L V RGH + V FS
Sbjct: 836 TQVIISHHST-IQYCDFCAGDELVAVALSHCSIELWNIKSLSKVADCRGHTSWVHCVTFS 894
Query: 546 PVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLW 605
+ +T+S D+TI+IW ++ C K+ + S L F I++ ++L
Sbjct: 895 SDGSLFLTSSEDQTIRIWE-TNKVC-KSSDAVLKSELDVVFHNGEVMILAIYNQKHIQLI 952
Query: 606 TVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNL 646
T I + E I + + + A G + + +
Sbjct: 953 NGNTDSIIMQTEPQESLICCCCLSEDLKFAAFGQENGAIKV 993
Score = 114 (45.2 bits), Expect = 3.2e-16, Sum P(2) = 3.2e-16
Identities = 58/281 (20%), Positives = 118/281 (41%)
Query: 157 DKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWD 216
D + + S D V++W+ KC+ ++H +V + G+ + D
Sbjct: 667 DDKYVATCSADKKVKIWNSRTGKCLYVYEEHTEQVNCCQFNN------RRGQYLLATCSD 720
Query: 217 LRDYSCKLTVPTYEMVEAVCAIPPGSAFDSFLSSYNQQTIKKKRRSLEIHFI-TVGERGI 275
D K TV +++ + C ++ N + R S +I + G
Sbjct: 721 --DTYIKNTVQLWDLKDKYCR-------NTMFGHVN--AVSHCRFSPNDDYIASCSTDGT 769
Query: 276 VRMWNADSACLYEQKSSDVTISFEMDDSKRGFTAATVL----PSNQGLLCVTADQQLLLY 331
V++WN SA E ++ ++ F D ++ V + + V A +LLL+
Sbjct: 770 VKLWNVHSA--NELRTIEIKDFFRNADEQQDDVEVLVKCCSWSRSSDTILVVAKNKLLLF 827
Query: 332 TTVEVPEKKMELILSKRLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYV 391
+V + L++ ++ ++ I F +E +AVA + ++++++ S+S
Sbjct: 828 ---DVTTSNL---LTQVIISHHSTIQYCDFCAGDE-LVAVALSHCSIELWNIKSLSKVAD 880
Query: 392 LAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRC 432
GH+ V C+ SS L +T S+D ++R+W++ C
Sbjct: 881 CRGHTSWVHCV---TFSSDGSLFLTSSEDQTIRIWETNKVC 918
Score = 109 (43.4 bits), Expect = 7.4e-17, Sum P(3) = 7.4e-17
Identities = 39/150 (26%), Positives = 67/150 (44%)
Query: 117 LATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLL 176
+A+ GAD+ + V+ + G H + F D DK + + S D V++W+
Sbjct: 629 IASCGADKTLQVFKAESGERLLEISAHDDEILCCTFSAD-DKYVA-TCSADKKVKIWNSR 686
Query: 177 AKKCVATLDKHFSRVTSMAITSD-GSTLISAGRD-----KVVNLWDLRDYSCKLTVPTYE 230
KC+ ++H +V + G L++ D V LWDL+D C+ T+ +
Sbjct: 687 TGKCLYVYEEHTEQVNCCQFNNRRGQYLLATCSDDTYIKNTVQLWDLKDKYCRNTM--FG 744
Query: 231 MVEAV--CAIPPGSAFDSFLSSYNQQ-TIK 257
V AV C P D +++S + T+K
Sbjct: 745 HVNAVSHCRFSPN---DDYIASCSTDGTVK 771
Score = 92 (37.4 bits), Expect = 6.3e-14, Sum P(2) = 6.3e-14
Identities = 37/184 (20%), Positives = 81/184 (44%)
Query: 41 SINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKG 100
SI + ++ + S + G + + + S D L +S + IR+W+ T K +S
Sbjct: 866 SIELWNIKSLSKVADCRGHTSWVHCVTFSSDGSLFLTSSEDQTIRIWE--TNKVCKSSDA 923
Query: 101 HDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGH--KGVVSSILFHPDTDK 158
+ + H +G ++ A ++K + ++G + + + ++ D K
Sbjct: 924 VLKSELDVVFH-NGEVMILAIYNQKHIQL-INGNTDSIIMQTEPQESLICCCCLSEDL-K 980
Query: 159 SLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLR 218
F G ++ ++V LL + + + + + + V T+D TLIS+ D V+ +W+ +
Sbjct: 981 FAAF-GQENGAIKVLRLLDGRVLTSREAYRTSVQHCRFTTDCQTLISSAHDAVIQVWNWQ 1039
Query: 219 DYSC 222
C
Sbjct: 1040 LNEC 1043
Score = 61 (26.5 bits), Expect = 5.8e-12, Sum P(3) = 5.8e-12
Identities = 16/80 (20%), Positives = 33/80 (41%)
Query: 143 HKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGST 202
H+ V F D+ + S D T++V+ + + + + H + ++D
Sbjct: 613 HRDAVYHACF--SRDRQRIASCGADKTLQVFKAESGERLLEISAHDDEILCCTFSADDKY 670
Query: 203 LISAGRDKVVNLWDLRDYSC 222
+ + DK V +W+ R C
Sbjct: 671 VATCSADKKVKIWNSRTGKC 690
Score = 61 (26.5 bits), Expect = 1.0e-10, Sum P(2) = 1.0e-10
Identities = 12/62 (19%), Positives = 28/62 (45%)
Query: 71 DDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWD 130
D+ + + H I +W++ +L + +GH + G L T+ D+ + +W+
Sbjct: 855 DELVAVALSHC-SIELWNIKSLSKVADCRGHTSWVHCVTFSSDGSLFLTSSEDQTIRIWE 913
Query: 131 VD 132
+
Sbjct: 914 TN 915
Score = 58 (25.5 bits), Expect = 6.5e-23, Sum P(3) = 6.5e-23
Identities = 12/35 (34%), Positives = 18/35 (51%)
Query: 267 FITVGERGIVRMWNADSACLYEQKSSDVTISFEMD 301
F+T E +R+W + C KSSD + E+D
Sbjct: 900 FLTSSEDQTIRIWETNKVC----KSSDAVLKSELD 930
>UNIPROTKB|F1SIZ2 [details] [associations]
symbol:POC1A "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005932 "microtubule basal body" evidence=IEA]
[GO:0005814 "centriole" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 OMA:ANHVEFH EMBL:CU914695
ProteinModelPortal:F1SIZ2 Ensembl:ENSSSCT00000012506 Uniprot:F1SIZ2
Length = 367
Score = 272 (100.8 bits), Expect = 1.1e-22, P = 1.1e-22
Identities = 79/303 (26%), Positives = 136/303 (44%)
Query: 345 LSKRLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDT 404
L + G+ + + + F +Q LA + + V+ + S +Y GH + V C++
Sbjct: 42 LERHFKGHRDAVTCVDFSFNMKQ-LASGSMDSCLMVWHMKPQSRAYRFTGHKDAVTCVNF 100
Query: 405 CALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDH 464
SG +L +GS+D +VR+W + V H V +V F Q+F V+ S D
Sbjct: 101 SP--SGHLL-ASGSRDKTVRIWVPNIKGESTVFRAHTATVRSVHFCSDGQSF-VTASDDK 156
Query: 465 TIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLP 524
TIKVWS K ++ H + +P+ L+ + S D+T +W
Sbjct: 157 TIKVWSTH----------RQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKT 206
Query: 525 DLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRA 584
V ++ H + V+F P V A D T+K+W + L+ ++ H+++V
Sbjct: 207 SRECVHSYCEHGGFVTYVDFHPSGTCVAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNAL 266
Query: 585 SFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALV 644
SF G +V+ +D +K+ + G + T H+ +A + E FA+GGSD V
Sbjct: 267 SFHPSGNYLVTASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQV 326
Query: 645 NLW 647
+W
Sbjct: 327 MVW 329
Score = 242 (90.2 bits), Expect = 6.9e-18, P = 6.9e-18
Identities = 57/203 (28%), Positives = 101/203 (49%)
Query: 29 SDG-SFIACACGESINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRVW 87
SDG SF+ + ++I + ++ + + SPD +L+ S+ + +++W
Sbjct: 144 SDGQSFVTASDDKTIKVWSTHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLW 203
Query: 88 DLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVV 147
D ++ +C+ S+ H G + HPSG +A AG D V VWDV +++ H V
Sbjct: 204 DKTSRECVHSYCEHGGFVTYVDFHPSGTCVAAAGMDNTVKVWDVRTHRLLQHYQLHSAAV 263
Query: 148 SSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAG 207
+++ FHP + L + S D+T+++ DL+ + + TL H T++A + G S G
Sbjct: 264 NALSFHPSGN--YLVTASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGG 321
Query: 208 RDKVVNLW----DLRDYSCKLTV 226
D+ V +W D+ DY L V
Sbjct: 322 SDEQVMVWKSNFDVIDYGEVLRV 344
Score = 193 (73.0 bits), Expect = 3.5e-12, P = 3.5e-12
Identities = 50/174 (28%), Positives = 81/174 (46%)
Query: 51 SIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMAC 110
S++ +G D +T + S + K L S + VW + + GH +
Sbjct: 41 SLERHFKGHRDAVTCVDFSFNMKQLASGSMDSCLMVWHMKPQSRAYRFTGHKDAVTCVNF 100
Query: 111 HPSGGLLATAGADRKVLVW--DVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDA 168
PSG LLA+ D+ V +W ++ G + F+ H V S+ F D +S + + SDD
Sbjct: 101 SPSGHLLASGSRDKTVRIWVPNIKGE--STVFRAHTATVRSVHFCSD-GQSFV-TASDDK 156
Query: 169 TVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSC 222
T++VW +K + +L +H + V + DG ++SA DK V LWD C
Sbjct: 157 TIKVWSTHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSREC 210
Score = 174 (66.3 bits), Expect = 4.8e-10, P = 4.8e-10
Identities = 46/193 (23%), Positives = 86/193 (44%)
Query: 28 SSDGSFIACACGESINIVDLSNASIKSTI-EGGSDTITALALSPDDKLLFSSGHSREIRV 86
S G +A + + + N +ST+ + T+ ++ D + ++ + I+V
Sbjct: 101 SPSGHLLASGSRDKTVRIWVPNIKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKTIKV 160
Query: 87 WDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGV 146
W K L S H P G L+ +A D+ V +WD C H + H G
Sbjct: 161 WSTHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGF 220
Query: 147 VSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISA 206
V+ + FHP + + +G D+ TV+VWD+ + + H + V +++ G+ L++A
Sbjct: 221 VTYVDFHP-SGTCVAAAGMDN-TVKVWDVRTHRLLQHYQLHSAAVNALSFHPSGNYLVTA 278
Query: 207 GRDKVVNLWDLRD 219
D + + DL +
Sbjct: 279 SSDSTLKILDLME 291
Score = 120 (47.3 bits), Expect = 0.00046, P = 0.00046
Identities = 72/305 (23%), Positives = 119/305 (39%)
Query: 139 YFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITS 198
+FKGH+ V+ + F + L SGS D+ + VW + + H VT + +
Sbjct: 45 HFKGHRDAVTCVDF--SFNMKQLASGSMDSCLMVWHMKPQSRAYRFTGHKDAVTCVNFSP 102
Query: 199 DGSTLISAGRDKVVNLW--DLRDYSCKLTVPTYEMVEAVCAIPPGSAFDSFLSSYNQQTI 256
G L S RDK V +W +++ S T V +V G SF+++ + +TI
Sbjct: 103 SGHLLASGSRDKTVRIWVPNIKGESTVFRAHT-ATVRSVHFCSDGQ---SFVTASDDKTI 158
Query: 257 KKKRRSLEIHFITVGER-GIVRM--WNADSACLYEQKSSDVTISFEMDDSKR-------- 305
K + ++ + VR ++ D L S D T+ D + R
Sbjct: 159 KVWSTHRQKFLFSLSQHINWVRCAKFSPDGR-LIVSASDDKTVKL-WDKTSRECVHSYCE 216
Query: 306 --GFTAATVLPSNQGLLCVTADQQLLLYTTVEVPEKKMELILSKRLVGYNEEILDLKFLG 363
GF T + + CV A + TV+V + + +L + ++ + L F
Sbjct: 217 HGGFV--TYVDFHPSGTCVAAAG---MDNTVKVWDVRTHRLLQHYQL-HSAAVNALSF-H 269
Query: 364 EEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSV 423
YL A++ +++ DL Y L GH T A S +G D V
Sbjct: 270 PSGNYLVTASSDSTLKILDLMEGRLLYTLHGHQGPAT---TVAFSRTGEYFASGGSDEQV 326
Query: 424 RLWDS 428
+W S
Sbjct: 327 MVWKS 331
>UNIPROTKB|Q9Y263 [details] [associations]
symbol:PLAA "Phospholipase A-2-activating protein"
species:9606 "Homo sapiens" [GO:0006954 "inflammatory response"
evidence=IEA] [GO:0016005 "phospholipase A2 activator activity"
evidence=IEA] [GO:0070062 "extracellular vesicular exosome"
evidence=IDA] [GO:0006644 "phospholipid metabolic process"
evidence=TAS] [GO:0007165 "signal transduction" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50176 PROSITE:PS50294 SMART:SM00320 GO:GO:0007165
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0070062
eggNOG:COG2319 GO:GO:0006954 GO:GO:0006644 EMBL:AL356133
GO:GO:0016005 HOGENOM:HOG000174247 KO:K14018 InterPro:IPR015155
InterPro:IPR013535 Pfam:PF09070 Pfam:PF08324 PROSITE:PS51394
PROSITE:PS51396 EMBL:AK001642 EMBL:AK002143 EMBL:AL133608
EMBL:BC032551 EMBL:AF145020 EMBL:AK223544 EMBL:AJ238243
EMBL:AF083395 IPI:IPI00218465 PIR:T43447 RefSeq:NP_001026859.1
UniGene:Hs.27182 PDB:2K89 PDB:2K8A PDB:2K8B PDB:2K8C PDB:3EBB
PDBsum:2K89 PDBsum:2K8A PDBsum:2K8B PDBsum:2K8C PDBsum:3EBB
ProteinModelPortal:Q9Y263 SMR:Q9Y263 IntAct:Q9Y263 STRING:Q9Y263
PhosphoSite:Q9Y263 DMDM:108935868 PaxDb:Q9Y263 PRIDE:Q9Y263
DNASU:9373 Ensembl:ENST00000397292 GeneID:9373 KEGG:hsa:9373
UCSC:uc003zqd.3 CTD:9373 GeneCards:GC09M026903 HGNC:HGNC:9043
HPA:CAB005035 HPA:HPA020994 HPA:HPA020996 MIM:603873
neXtProt:NX_Q9Y263 PharmGKB:PA33370 HOVERGEN:HBG008204
InParanoid:Q9Y263 OMA:VSECCRF OrthoDB:EOG4DJJVW BindingDB:Q9Y263
ChEMBL:CHEMBL6114 ChiTaRS:PLAA EvolutionaryTrace:Q9Y263
GenomeRNAi:9373 NextBio:35110 ArrayExpress:Q9Y263 Bgee:Q9Y263
CleanEx:HS_PLAA Genevestigator:Q9Y263 GermOnline:ENSG00000137055
Uniprot:Q9Y263
Length = 795
Score = 296 (109.3 bits), Expect = 1.1e-22, P = 1.1e-22
Identities = 84/270 (31%), Positives = 131/270 (48%)
Query: 386 MSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLW--DSESRCCVGVG--TGHM 441
+SCS L GH V L CA G + V S+D + RLW DS +R + +GH
Sbjct: 10 LSCS--LRGHELDVRGLVCCAYPPGAFVSV--SRDRTTRLWAPDSPNRSFTEMHCMSGHS 65
Query: 442 GAVGAVAF--SKKL--QNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDI 497
V V S + + +G +DH I ++S D PM L ++ H +
Sbjct: 66 NFVSCVCIIPSSDIYPHGLIATGGNDHNICIFSLDS-------PMPLY---ILKGHKNTV 115
Query: 498 NSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGD 557
SL+ +L+ +GS D TA VW L D ++T +GH +W+V+ P +++T S D
Sbjct: 116 CSLSSGKFGTLL-SGSWDTTAKVW-LNDKC-MMTLQGHTAAVWAVKILPEQGLMLTGSAD 172
Query: 558 KTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYD 617
KT+K+W G C +TF GH V + L+ + +SC D ++ W + TGEC+ Y
Sbjct: 173 KTVKLWKA--GRCERTFSGHEDCVRGLAILSE-TEFLSCANDASIRRWQI-TGECLEVYY 228
Query: 618 KHEDKIWALAVGKKTEMFATGGSDALVNLW 647
H + I++++V F T D + +W
Sbjct: 229 GHTNYIYSISVFPNCRDFVTTAEDRSLRIW 258
Score = 156 (60.0 bits), Expect = 1.8e-07, P = 1.8e-07
Identities = 47/157 (29%), Positives = 77/157 (49%)
Query: 115 GLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDK-SLLFSGSDDATVRVW 173
GL+AT G D + ++ +D + KGHK V S+ + K L SGS D T +VW
Sbjct: 83 GLIATGGNDHNICIFSLDSPMPLYILKGHKNTVCSL----SSGKFGTLLSGSWDTTAKVW 138
Query: 174 DLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYEMVE 233
L KC+ TL H + V ++ I + +++ DK V LW + C+ T +E +
Sbjct: 139 --LNDKCMMTLQGHTAAVWAVKILPEQGLMLTGSADKTVKLW--KAGRCERTFSGHE--D 192
Query: 234 AVCAIPPGSAFDSFLSSYNQQTIKKKR---RSLEIHF 267
V + S + FLS N +I++ + LE+++
Sbjct: 193 CVRGLAILSETE-FLSCANDASIRRWQITGECLEVYY 228
Score = 155 (59.6 bits), Expect = 2.3e-07, P = 2.3e-07
Identities = 41/186 (22%), Positives = 85/186 (45%)
Query: 56 IEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPSGG 115
++G +T+ +L+ LL S +VW L+ KC+ + +GH + P G
Sbjct: 108 LKGHKNTVCSLSSGKFGTLL-SGSWDTTAKVW-LND-KCMMTLQGHTAAVWAVKILPEQG 164
Query: 116 LLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDL 175
L+ T AD+ V +W G C F GH+ V + +T+ S ++DA++R W +
Sbjct: 165 LMLTGSADKTVKLWKA--GRCERTFSGHEDCVRGLAILSETE---FLSCANDASIRRWQI 219
Query: 176 LAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYEMVEAV 235
+ C+ H + + S+++ + ++ D+ + +W + + + +P + +
Sbjct: 220 TGE-CLEVYYGHTNYIYSISVFPNCRDFVTTAEDRSLRIWKHGECAQTIRLPA-QSIWCC 277
Query: 236 CAIPPG 241
C + G
Sbjct: 278 CVLDNG 283
Score = 136 (52.9 bits), Expect = 2.7e-05, P = 2.7e-05
Identities = 33/102 (32%), Positives = 55/102 (53%)
Query: 369 LAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKI-LIVTGSKDNSVRLWD 427
+A N + ++ L S Y+L GH V C+LSSGK +++GS D + ++W
Sbjct: 85 IATGGNDHNICIFSLDSPMPLYILKGHKNTV-----CSLSSGKFGTLLSGSWDTTAKVWL 139
Query: 428 SESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVW 469
++ C+ GH AV AV + Q +++GS+D T+K+W
Sbjct: 140 NDK--CMMTLQGHTAAVWAVKILPE-QGLMLTGSADKTVKLW 178
Score = 128 (50.1 bits), Expect = 0.00019, P = 0.00019
Identities = 46/196 (23%), Positives = 84/196 (42%)
Query: 31 GSFIACACGESINI--VDLSNASIKST--IEGGSDTITALALSPDDK-----LLFSSGHS 81
G+F++ + + + D N S + G S+ ++ + + P L+ + G+
Sbjct: 32 GAFVSVSRDRTTRLWAPDSPNRSFTEMHCMSGHSNFVSCVCIIPSSDIYPHGLIATGGND 91
Query: 82 REIRVWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFK 141
I ++ L + L KGH ++ G LL+ + D VW D C +
Sbjct: 92 HNICIFSLDSPMPLYILKGHKNTVCSLSSGKFGTLLSGSW-DTTAKVWLNDK--CMMTLQ 148
Query: 142 GHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGS 201
GH V ++ P+ + L+ +GS D TV++W A +C T H V +AI S+ +
Sbjct: 149 GHTAAVWAVKILPE--QGLMLTGSADKTVKLWK--AGRCERTFSGHEDCVRGLAILSE-T 203
Query: 202 TLISAGRDKVVNLWDL 217
+S D + W +
Sbjct: 204 EFLSCANDASIRRWQI 219
Score = 126 (49.4 bits), Expect = 0.00032, P = 0.00032
Identities = 32/167 (19%), Positives = 74/167 (44%)
Query: 49 NASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGM 108
N T++G + + A+ + P+ L+ + + +++W +C R++ GH+ G+
Sbjct: 140 NDKCMMTLQGHTAAVWAVKILPEQGLMLTGSADKTVKLWKAG--RCERTFSGHEDCVRGL 197
Query: 109 ACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDA 168
A L+ A D + W + G C + GH + SI P+ + + ++D
Sbjct: 198 AILSETEFLSCAN-DASIRRWQITGE-CLEVYYGHTNYIYSISVFPNCRDFV--TTAEDR 253
Query: 169 TVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLW 215
++R+W +C T+ + + +G ++ A D ++ ++
Sbjct: 254 SLRIWK--HGECAQTIRLPAQSIWCCCVLDNGDIVVGAS-DGIIRVF 297
Score = 115 (45.5 bits), Expect = 5.4e-09, Sum P(2) = 5.4e-09
Identities = 43/158 (27%), Positives = 70/158 (44%)
Query: 92 LKCLRSWKGHDGPAIGMAC--HPSGGLLATAGADRKVLVWDVDG---GFCT-HYFKGHKG 145
L C S +GH+ G+ C +P G ++ + DR +W D F H GH
Sbjct: 10 LSC--SLRGHELDVRGLVCCAYPPGAFVSVS-RDRTTRLWAPDSPNRSFTEMHCMSGHSN 66
Query: 146 VVSSILFHPDTD---KSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGST 202
VS + P +D L+ +G +D + ++ L + + L H + V S++ G T
Sbjct: 67 FVSCVCIIPSSDIYPHGLIATGGNDHNICIFSLDSPMPLYILKGHKNTVCSLSSGKFG-T 125
Query: 203 LISAGRDKVVNLWDLRDYSCKLTVPTYEM-VEAVCAIP 239
L+S D +W L D C +T+ + V AV +P
Sbjct: 126 LLSGSWDTTAKVW-LND-KCMMTLQGHTAAVWAVKILP 161
Score = 106 (42.4 bits), Expect = 5.4e-09, Sum P(2) = 5.4e-09
Identities = 42/155 (27%), Positives = 72/155 (46%)
Query: 413 LIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFD 472
L++TGS D +V+LW + RC +GH V +A + + FL S ++D +I+ W
Sbjct: 165 LMLTGSADKTVKLWKA-GRC-ERTFSGHEDCVRGLAILSETE-FL-SCANDASIRRWQIT 220
Query: 473 GLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTF 532
G + V H I S++V PN T ++DR+ +W+ + T
Sbjct: 221 G-----------ECLEVYYGHTNYIYSISVFPNCRDFVTTAEDRSLRIWKHGECAQ--TI 267
Query: 533 RGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISD 567
R + IW +V+ AS D I++++ S+
Sbjct: 268 RLPAQSIWCCCVLDNGDIVVGAS-DGIIRVFTESE 301
>POMBASE|SPAC227.12 [details] [associations]
symbol:SPAC227.12 "U4/U6 x U5 tri-snRNP complex subunit
Prp4 family (predicted)" species:4896 "Schizosaccharomyces pombe"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005829 "cytosol"
evidence=IDA] [GO:0045292 "mRNA cis splicing, via spliceosome"
evidence=ISS] [GO:0046540 "U4/U6 x U5 tri-snRNP complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR003648 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00500 PomBase:SPAC227.12
GO:GO:0005829 EMBL:CU329670 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR027106
PANTHER:PTHR19846 GO:GO:0046540 HSSP:P16649 GO:GO:0045292
InterPro:IPR014906 Pfam:PF08799 HOGENOM:HOG000157615 KO:K12662
OMA:CKIWDLR OrthoDB:EOG4V1B90 PIR:T50168 RefSeq:NP_592966.1
ProteinModelPortal:Q9UTC7 IntAct:Q9UTC7 STRING:Q9UTC7
EnsemblFungi:SPAC227.12.1 GeneID:2541477 KEGG:spo:SPAC227.12
NextBio:20802576 Uniprot:Q9UTC7
Length = 462
Score = 289 (106.8 bits), Expect = 1.1e-22, P = 1.1e-22
Identities = 92/319 (28%), Positives = 151/319 (47%)
Query: 339 KKMELILSKRLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEI 398
+K EL+ S+ +G I ++F + + + QV+V++ ++S + GH++
Sbjct: 160 QKAELMGSQ--IGGERPIAIVRFSNNGNHFASGSWG-GQVKVWNSDNLSEVQLFRGHTDR 216
Query: 399 VLCLDTCAL------SSGKILIVTGSKDNSVRLWD-SESRCCVGVGTGHMGAVGAVAFSK 451
V LD L S ++ + TG+ DN+V LW S+S + + GH+ VG VAF
Sbjct: 217 VSGLDWYPLCQAWDADSEQLTLATGAADNTVCLWKASQSTPLLRL-EGHLARVGRVAFHP 275
Query: 452 KLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCT 511
++LVS S D T ++W D + L + H + I S+A P+ SLV +
Sbjct: 276 S-GDYLVSASFDTTWRLW-------DVHTGVELLMQE---GHSEGIFSIACQPDGSLVSS 324
Query: 512 GSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCL 571
G D +W L S++ H R I ++ +SP + T+S D T+KIW + S
Sbjct: 325 GGNDAIGRIWDLRSGKSIMVLDEHIRQIVAMAWSPNGYQLATSSADDTVKIWDLRKVSLA 384
Query: 572 KTFEGHTSSVLRASFLTRGAQ--IVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVG 629
T H+S V ++ G I + G DG VKLW I + HE+K+ ++V
Sbjct: 385 HTIPAHSSLVSDVRYIESGVNRFIATSGYDGCVKLWNPLNCSLIKSMVGHEEKV--MSVD 442
Query: 630 KKTEMFATGGSDALVNLWH 648
+ F + G D + LW+
Sbjct: 443 GYGDRFISSGYDRTIKLWY 461
Score = 232 (86.7 bits), Expect = 3.2e-16, P = 3.2e-16
Identities = 69/238 (28%), Positives = 112/238 (47%)
Query: 18 QFYGGGPLVV---SSDGS-FIACACGESINIVDLSNASIKSTIEGGSDTITALALSP--- 70
Q G P+ + S++G+ F + + G + + + N S G +D ++ L P
Sbjct: 168 QIGGERPIAIVRFSNNGNHFASGSWGGQVKVWNSDNLSEVQLFRGHTDRVSGLDWYPLCQ 227
Query: 71 -----DDKLLFSSGHS-REIRVWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADR 124
++L ++G + + +W S L +GH +A HPSG L +A D
Sbjct: 228 AWDADSEQLTLATGAADNTVCLWKASQSTPLLRLEGHLARVGRVAFHPSGDYLVSASFDT 287
Query: 125 KVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATL 184
+WDV G +GH + SI PD SL+ SG +DA R+WDL + K + L
Sbjct: 288 TWRLWDVHTGVELLMQEGHSEGIFSIACQPDG--SLVSSGGNDAIGRIWDLRSGKSIMVL 345
Query: 185 DKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYE-MVEAVCAIPPG 241
D+H ++ +MA + +G L ++ D V +WDLR S T+P + +V V I G
Sbjct: 346 DEHIRQIVAMAWSPNGYQLATSSADDTVKIWDLRKVSLAHTIPAHSSLVSDVRYIESG 403
Score = 224 (83.9 bits), Expect = 2.5e-15, P = 2.5e-15
Identities = 63/235 (26%), Positives = 103/235 (43%)
Query: 414 IVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDG 473
IV K + L +E +G G + V FS +F SGS +KVW+ D
Sbjct: 148 IVLSGKSSIEHLQKAE---LMGSQIGGERPIAIVRFSNNGNHF-ASGSWGGQVKVWNSDN 203
Query: 474 LSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSL-VCTGSQDRTACVWRLPDLVSVVTF 532
LS+ Q V + A ++ L + TG+ D T C+W+ ++
Sbjct: 204 LSE--VQLFRGHTDRVSGLDWYPLCQAWDADSEQLTLATGAADNTVCLWKASQSTPLLRL 261
Query: 533 RGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQ 592
GH + V F P +++AS D T ++W + G L EGH+ + + G+
Sbjct: 262 EGHLARVGRVAFHPSGDYLVSASFDTTWRLWDVHTGVELLMQEGHSEGIFSIACQPDGSL 321
Query: 593 IVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLW 647
+ S G D + ++W +R+G+ I D+H +I A+A AT +D V +W
Sbjct: 322 VSSGGNDAIGRIWDLRSGKSIMVLDEHIRQIVAMAWSPNGYQLATSSADDTVKIW 376
Score = 197 (74.4 bits), Expect = 2.4e-12, P = 2.4e-12
Identities = 46/159 (28%), Positives = 76/159 (47%)
Query: 57 EGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPSGGL 116
EG S+ I ++A PD L+ S G+ R+WDL + K + H + MA P+G
Sbjct: 304 EGHSEGIFSIACQPDGSLVSSGGNDAIGRIWDLRSGKSIMVLDEHIRQIVAMAWSPNGYQ 363
Query: 117 LATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLL 176
LAT+ AD V +WD+ H H +VS + + + + D V++W+ L
Sbjct: 364 LATSSADDTVKIWDLRKVSLAHTIPAHSSLVSDVRYIESGVNRFIATSGYDGCVKLWNPL 423
Query: 177 AKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLW 215
+ ++ H +V M++ G IS+G D+ + LW
Sbjct: 424 NCSLIKSMVGHEEKV--MSVDGYGDRFISSGYDRTIKLW 460
Score = 179 (68.1 bits), Expect = 2.3e-10, P = 2.3e-10
Identities = 54/189 (28%), Positives = 82/189 (43%)
Query: 39 GESINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSW 98
G+S +I L A + + GG I + S + S +++VW+ L ++ +
Sbjct: 152 GKS-SIEHLQKAELMGSQIGGERPIAIVRFSNNGNHFASGSWGGQVKVWNSDNLSEVQLF 210
Query: 99 KGHDGPAIGMACHP--------SGGL-LATAGADRKVLVWDVDGGFCTHYFKGHKGVVSS 149
+GH G+ +P S L LAT AD V +W +GH V
Sbjct: 211 RGHTDRVSGLDWYPLCQAWDADSEQLTLATGAADNTVCLWKASQSTPLLRLEGHLARVGR 270
Query: 150 ILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRD 209
+ FHP D L S S D T R+WD+ + + H + S+A DGS + S G D
Sbjct: 271 VAFHPSGD--YLVSASFDTTWRLWDVHTGVELLMQEGHSEGIFSIACQPDGSLVSSGGND 328
Query: 210 KVVNLWDLR 218
+ +WDLR
Sbjct: 329 AIGRIWDLR 337
>POMBASE|SPAC18B11.10 [details] [associations]
symbol:tup11 "transcriptional corepressor Tup11"
species:4896 "Schizosaccharomyces pombe" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:0000790 "nuclear chromatin" evidence=IC]
[GO:0003714 "transcription corepressor activity" evidence=IGI]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0006342
"chromatin silencing" evidence=TAS] [GO:0033554 "cellular response
to stress" evidence=IEP] [GO:0042393 "histone binding"
evidence=IDA] [GO:0043234 "protein complex" evidence=NAS]
[GO:0045014 "negative regulation of transcription by glucose"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPAC18B11.10 GO:GO:0005829 GO:GO:0003714
GO:GO:0043234 EMBL:CU329670 GenomeReviews:CU329670_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0033554 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0000122 GO:GO:0000790 GO:GO:0006342
GO:GO:0042393 GO:GO:0045014 EMBL:AB027768 PIR:S58306
RefSeq:NP_592873.1 ProteinModelPortal:Q09715 STRING:Q09715
EnsemblFungi:SPAC18B11.10.1 GeneID:2542299 KEGG:spo:SPAC18B11.10
HOGENOM:HOG000200558 KO:K06666 OMA:KPRENEN OrthoDB:EOG4KM2C2
NextBio:20803361 InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558
Uniprot:Q09715
Length = 614
Score = 293 (108.2 bits), Expect = 1.3e-22, P = 1.3e-22
Identities = 83/305 (27%), Positives = 144/305 (47%)
Query: 359 LKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIV---LCLDTCALS-SGKILI 414
+KF +YLA N + V+D+ + + L S L + T A S GK L
Sbjct: 319 VKF-SNNGKYLATGCN-QAANVFDVQTGKKLFTLHEESPDPSRDLYVRTIAFSPDGKYL- 375
Query: 415 VTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGL 474
VTG++D ++LWD ++ V +GH + ++ FS F+VSGS D T ++W +
Sbjct: 376 VTGTEDRQIKLWDLSTQKVRYVFSGHEQDIYSLDFSHN-GRFIVSGSGDRTARLWDVE-- 432
Query: 475 SDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRG 534
+ + L+ + +G + ++A++PND + GS D+ VW + + V G
Sbjct: 433 --TGQCILKLEIE-----NG--VTAIAISPNDQFIAVGSLDQIIRVWSVSGTL-VERLEG 482
Query: 535 HKRGIWSVEFSPVDQVVITASGDKTIKIWSIS------------DGSCLKTFEGHTSSVL 582
HK ++S+ FSP ++++ S DKTIK+W + +G C T+ GHT VL
Sbjct: 483 HKESVYSIAFSPDSSILLSGSLDKTIKVWELQATRSVGLSAIKPEGICKATYTGHTDFVL 542
Query: 583 RASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDA 642
+ +S D ++ W ++TG+ T H++ + ++ FA+G D
Sbjct: 543 SVAVSPDSRWGLSGSKDRSMQFWDLQTGQSYLTCQGHKNSVISVCFSPDGRQFASGSGDL 602
Query: 643 LVNLW 647
+W
Sbjct: 603 RARIW 607
Score = 283 (104.7 bits), Expect = 1.6e-21, P = 1.6e-21
Identities = 75/253 (29%), Positives = 124/253 (49%)
Query: 367 QYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLW 426
+YL T Q++++DLS+ YV +GH + + LD +G+ IV+GS D + RLW
Sbjct: 373 KYLVTGTEDRQIKLWDLSTQKVRYVFSGHEQDIYSLDFS--HNGRF-IVSGSGDRTARLW 429
Query: 427 DSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKA 486
D E+ C+ + V A+A S Q F+ GS D I+VWS G E+
Sbjct: 430 DVETGQCI-LKLEIENGVTAIAISPNDQ-FIAVGSLDQIIRVWSVSGTL--VER------ 479
Query: 487 KAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRL------------PDLVSVVTFRG 534
+ H + + S+A +P+ S++ +GS D+T VW L P+ + T+ G
Sbjct: 480 ---LEGHKESVYSIAFSPDSSILLSGSLDKTIKVWELQATRSVGLSAIKPEGICKATYTG 536
Query: 535 HKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIV 594
H + SV SP + ++ S D++++ W + G T +GH +SV+ F G Q
Sbjct: 537 HTDFVLSVAVSPDSRWGLSGSKDRSMQFWDLQTGQSYLTCQGHKNSVISVCFSPDGRQFA 596
Query: 595 SCGADGLVKLWTV 607
S D ++W++
Sbjct: 597 SGSGDLRARIWSI 609
Score = 255 (94.8 bits), Expect = 2.0e-18, P = 2.0e-18
Identities = 85/282 (30%), Positives = 133/282 (47%)
Query: 295 TISFEMDDSKRGFTAATVL--PSNQGLLCVTADQQLLLYTTVEVPEKKMELILSKRLVGY 352
T+ E D R T+ P + L+ T D+Q+ L+ ++ +K+ + S G+
Sbjct: 349 TLHEESPDPSRDLYVRTIAFSPDGKYLVTGTEDRQIKLW---DLSTQKVRYVFS----GH 401
Query: 353 NEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKI 412
++I L F +++ + +++D+ + C L EI + A+S
Sbjct: 402 EQDIYSLDF-SHNGRFIVSGSGDRTARLWDVETGQCILKL----EIENGVTAIAISPNDQ 456
Query: 413 LIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFD 472
I GS D +R+W S S V GH +V ++AFS + L+SGS D TIKVW
Sbjct: 457 FIAVGSLDQIIRVW-SVSGTLVERLEGHKESVYSIAFSPD-SSILLSGSLDKTIKVWELQ 514
Query: 473 -----GLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLV 527
GLS A +P + KA H + S+AV+P+ +GS+DR+ W L
Sbjct: 515 ATRSVGLS--AIKPEGI-CKATYTGHTDFVLSVAVSPDSRWGLSGSKDRSMQFWDLQTGQ 571
Query: 528 SVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGS 569
S +T +GHK + SV FSP + + SGD +IWSI S
Sbjct: 572 SYLTCQGHKNSVISVCFSPDGRQFASGSGDLRARIWSIDPAS 613
Score = 251 (93.4 bits), Expect = 5.4e-18, P = 5.4e-18
Identities = 69/236 (29%), Positives = 109/236 (46%)
Query: 25 LVVSSDGSFIACACGE-SINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSRE 83
+ S DG ++ + I + DLS ++ G I +L S + + + S R
Sbjct: 366 IAFSPDGKYLVTGTEDRQIKLWDLSTQKVRYVFSGHEQDIYSLDFSHNGRFIVSGSGDRT 425
Query: 84 IRVWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGH 143
R+WD+ T +C+ + +G +A P+ +A D+ + VW V G +GH
Sbjct: 426 ARLWDVETGQCILKLEIENG-VTAIAISPNDQFIAVGSLDQIIRVWSVSGTLVER-LEGH 483
Query: 144 KGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKK------------CVATLDKHFSRV 191
K V SI F PD+ S+L SGS D T++VW+L A + C AT H V
Sbjct: 484 KESVYSIAFSPDS--SILLSGSLDKTIKVWELQATRSVGLSAIKPEGICKATYTGHTDFV 541
Query: 192 TSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYE-MVEAVCAIPPGSAFDS 246
S+A++ D +S +D+ + WDL+ LT ++ V +VC P G F S
Sbjct: 542 LSVAVSPDSRWGLSGSKDRSMQFWDLQTGQSYLTCQGHKNSVISVCFSPDGRQFAS 597
Score = 238 (88.8 bits), Expect = 1.4e-16, P = 1.4e-16
Identities = 58/197 (29%), Positives = 98/197 (49%)
Query: 28 SSDGSFIACACGESINIVDLSNASIKSTI-EGGSDT-----ITALALSPDDKLLFSSGHS 81
S++G ++A C ++ N+ D+ T+ E D + +A SPD K L +
Sbjct: 322 SNNGKYLATGCNQAANVFDVQTGKKLFTLHEESPDPSRDLYVRTIAFSPDGKYLVTGTED 381
Query: 82 REIRVWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFK 141
R+I++WDLST K + GH+ + +G + + DR +WDV+ G C +
Sbjct: 382 RQIKLWDLSTQKVRYVFSGHEQDIYSLDFSHNGRFIVSGSGDRTARLWDVETGQCILKLE 441
Query: 142 GHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGS 201
GV ++I P+ D+ + GS D +RVW + + V L+ H V S+A + D S
Sbjct: 442 IENGV-TAIAISPN-DQFIAV-GSLDQIIRVWSV-SGTLVERLEGHKESVYSIAFSPDSS 497
Query: 202 TLISAGRDKVVNLWDLR 218
L+S DK + +W+L+
Sbjct: 498 ILLSGSLDKTIKVWELQ 514
Score = 192 (72.6 bits), Expect = 1.5e-11, P = 1.5e-11
Identities = 56/206 (27%), Positives = 91/206 (44%)
Query: 28 SSDGSFIACACGE-SINIVDLSNAS--IKSTIEGGSDTITALALSPDDKLLFSSGHSREI 84
S +G FI G+ + + D+ +K IE G +TA+A+SP+D+ + + I
Sbjct: 411 SHNGRFIVSGSGDRTARLWDVETGQCILKLEIENG---VTAIAISPNDQFIAVGSLDQII 467
Query: 85 RVWDLS-TLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDG---------- 133
RVW +S TL + +GH +A P +L + D+ + VW++
Sbjct: 468 RVWSVSGTL--VERLEGHKESVYSIAFSPDSSILLSGSLDKTIKVWELQATRSVGLSAIK 525
Query: 134 --GFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRV 191
G C + GH V S+ PD+ L SGS D +++ WDL + T H + V
Sbjct: 526 PEGICKATYTGHTDFVLSVAVSPDSRWGL--SGSKDRSMQFWDLQTGQSYLTCQGHKNSV 583
Query: 192 TSMAITSDGSTLISAGRDKVVNLWDL 217
S+ + DG S D +W +
Sbjct: 584 ISVCFSPDGRQFASGSGDLRARIWSI 609
Score = 163 (62.4 bits), Expect = 2.2e-08, P = 2.2e-08
Identities = 44/163 (26%), Positives = 74/163 (45%)
Query: 25 LVVSSDGSFIACACGESINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREI 84
+ +S + FIA + I V + ++ +EG +++ ++A SPD +L S + I
Sbjct: 449 IAISPNDQFIAVGSLDQIIRVWSVSGTLVERLEGHKESVYSIAFSPDSSILLSGSLDKTI 508
Query: 85 RVWDL--------STLK----CLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVD 132
+VW+L S +K C ++ GH + +A P + DR + WD+
Sbjct: 509 KVWELQATRSVGLSAIKPEGICKATYTGHTDFVLSVAVSPDSRWGLSGSKDRSMQFWDLQ 568
Query: 133 GGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDL 175
G +GHK V S+ F PD + SGS D R+W +
Sbjct: 569 TGQSYLTCQGHKNSVISVCFSPDGRQ--FASGSGDLRARIWSI 609
Score = 126 (49.4 bits), Expect = 0.00023, P = 0.00023
Identities = 39/138 (28%), Positives = 61/138 (44%)
Query: 113 SGGLLATAGADRKVLVWDVDGG---FCTHYFKGHKG---VVSSILFHPDTDKSLLFSGSD 166
+G LAT G ++ V+DV G F H V +I F PD L +G++
Sbjct: 324 NGKYLAT-GCNQAANVFDVQTGKKLFTLHEESPDPSRDLYVRTIAFSPDG--KYLVTGTE 380
Query: 167 DATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTV 226
D +++WDL +K H + S+ + +G ++S D+ LWD+ C L +
Sbjct: 381 DRQIKLWDLSTQKVRYVFSGHEQDIYSLDFSHNGRFIVSGSGDRTARLWDVETGQCILKL 440
Query: 227 PTYEMVEAVCAIPPGSAF 244
V A+ AI P F
Sbjct: 441 EIENGVTAI-AISPNDQF 457
Score = 123 (48.4 bits), Expect = 0.00048, P = 0.00048
Identities = 23/80 (28%), Positives = 40/80 (50%)
Query: 53 KSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHP 112
K+T G +D + ++A+SPD + S R ++ WDL T + + +GH I + P
Sbjct: 531 KATYTGHTDFVLSVAVSPDSRWGLSGSKDRSMQFWDLQTGQSYLTCQGHKNSVISVCFSP 590
Query: 113 SGGLLATAGADRKVLVWDVD 132
G A+ D + +W +D
Sbjct: 591 DGRQFASGSGDLRARIWSID 610
>DICTYBASE|DDB_G0282189 [details] [associations]
symbol:tupA "transcriptional repressor TUP1"
species:44689 "Dictyostelium discoideum" [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
dictyBase:DDB_G0282189 GO:GO:0005634 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GenomeReviews:CM000152_GR eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 EMBL:AAFI02000046
HSSP:P16649 KO:K06666 InterPro:IPR013890 Pfam:PF08581
ProDom:PD010558 EMBL:AF079369 RefSeq:XP_640309.1
ProteinModelPortal:O76734 SMR:O76734 STRING:O76734 PRIDE:O76734
EnsemblProtists:DDB0214909 GeneID:8623485 KEGG:ddi:DDB_G0282189
OMA:HNSVVCC ProtClustDB:CLSZ2729020 Uniprot:O76734
Length = 579
Score = 291 (107.5 bits), Expect = 1.8e-22, P = 1.8e-22
Identities = 85/311 (27%), Positives = 142/311 (45%)
Query: 352 YNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEI---VLCLDTCALS 408
+N + + F + +YLA N Q+YD+ + + SE + C
Sbjct: 280 HNSVVCCVNF-SNDGKYLATGCN-RSAQIYDVDTGKKVHAFVDESEKDGDLYIRSVCFSP 337
Query: 409 SGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKV 468
G L TG++D +V++WD ++ GH + ++ +S F+VSGS D K+
Sbjct: 338 DGNYL-ATGAEDKTVKVWDIHTKKIQHTFYGHELDIYSLDYSSD-GRFIVSGSGDKKAKI 395
Query: 469 WSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVS 528
W + + L + V +G + S+A++P+ LV GS D +W
Sbjct: 396 WDIE----KGKCAFTLGNEEVGPKNG--VTSVAMSPDGRLVAAGSLDNIVRLWDAQTGYF 449
Query: 529 VVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGS-----CLKTFEGHTSSVLR 583
+ + GH ++SV FSP + + + S DK++K+W +S GS C TF GH VL
Sbjct: 450 LERYEGHLDSVYSVAFSPDGKSLASGSLDKSLKLWDLS-GSRSRSRCRATFNGHKDFVLS 508
Query: 584 ASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTE---MFATGGS 640
+F G+ ++S D V+ W R G H++ + ++A+ K +FATG
Sbjct: 509 VAFSPDGSWLISGSKDRSVQFWDPRNGTTHMMLQGHKNSVISVALSPKNNSHGVFATGSG 568
Query: 641 DALVNLW-HDS 650
D LW +DS
Sbjct: 569 DFRSRLWKYDS 579
Score = 263 (97.6 bits), Expect = 2.2e-19, P = 2.2e-19
Identities = 69/230 (30%), Positives = 114/230 (49%)
Query: 28 SSDGSFIACACGE-SINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRV 86
S DG+++A + ++ + D+ I+ T G I +L S D + + S ++ ++
Sbjct: 336 SPDGNYLATGAEDKTVKVWDIHTKKIQHTFYGHELDIYSLDYSSDGRFIVSGSGDKKAKI 395
Query: 87 WDLSTLKCLRSWKGHD-GPAIGM---ACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKG 142
WD+ KC + + GP G+ A P G L+A D V +WD G+ ++G
Sbjct: 396 WDIEKGKCAFTLGNEEVGPKNGVTSVAMSPDGRLVAAGSLDNIVRLWDAQTGYFLERYEG 455
Query: 143 HKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKK----CVATLDKHFSRVTSMAITS 198
H V S+ F PD KSL SGS D ++++WDL + C AT + H V S+A +
Sbjct: 456 HLDSVYSVAFSPD-GKSLA-SGSLDKSLKLWDLSGSRSRSRCRATFNGHKDFVLSVAFSP 513
Query: 199 DGSTLISAGRDKVVNLWDLRDYSCKLTVPTYE-MVEAVCAIPPGSAFDSF 247
DGS LIS +D+ V WD R+ + + + ++ V +V P ++ F
Sbjct: 514 DGSWLISGSKDRSVQFWDPRNGTTHMMLQGHKNSVISVALSPKNNSHGVF 563
Score = 250 (93.1 bits), Expect = 6.0e-18, P = 6.0e-18
Identities = 66/229 (28%), Positives = 106/229 (46%)
Query: 28 SSDGSFIACACGESINIVDLS-----NASIKSTIEGGSDTITALALSPDDKLLFSSGHSR 82
S+DG ++A C S I D+ +A + + + G I ++ SPD L + +
Sbjct: 290 SNDGKYLATGCNRSAQIYDVDTGKKVHAFVDESEKDGDLYIRSVCFSPDGNYLATGAEDK 349
Query: 83 EIRVWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFK- 141
++VWD+ T K ++ GH+ + G + + D+K +WD++ G C
Sbjct: 350 TVKVWDIHTKKIQHTFYGHELDIYSLDYSSDGRFIVSGSGDKKAKIWDIEKGKCAFTLGN 409
Query: 142 ---GHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITS 198
G K V+S+ PD L+ +GS D VR+WD + + H V S+A +
Sbjct: 410 EEVGPKNGVTSVAMSPDG--RLVAAGSLDNIVRLWDAQTGYFLERYEGHLDSVYSVAFSP 467
Query: 199 DGSTLISAGRDKVVNLWDL---RDYS-CKLTVPTY-EMVEAVCAIPPGS 242
DG +L S DK + LWDL R S C+ T + + V +V P GS
Sbjct: 468 DGKSLASGSLDKSLKLWDLSGSRSRSRCRATFNGHKDFVLSVAFSPDGS 516
Score = 184 (69.8 bits), Expect = 1.0e-10, P = 1.0e-10
Identities = 47/156 (30%), Positives = 73/156 (46%)
Query: 25 LVVSSDGSFIACACGESI-NIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSRE 83
+ +S DG +A ++I + D EG D++ ++A SPD K L S +
Sbjct: 421 VAMSPDGRLVAAGSLDNIVRLWDAQTGYFLERYEGHLDSVYSVAFSPDGKSLASGSLDKS 480
Query: 84 IRVWDLS----TLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHY 139
+++WDLS +C ++ GH + +A P G L + DR V WD G TH
Sbjct: 481 LKLWDLSGSRSRSRCRATFNGHKDFVLSVAFSPDGSWLISGSKDRSVQFWDPRNG-TTHM 539
Query: 140 F-KGHKGVVSSILFHPDTDKSLLFS-GSDDATVRVW 173
+GHK V S+ P + +F+ GS D R+W
Sbjct: 540 MLQGHKNSVISVALSPKNNSHGVFATGSGDFRSRLW 575
Score = 163 (62.4 bits), Expect = 6.1e-11, Sum P(2) = 6.1e-11
Identities = 48/157 (30%), Positives = 75/157 (47%)
Query: 114 GGLLATAGADRKVLVWDVDGGFCTHYF--KGHKG---VVSSILFHPDTDKSLLFSGSDDA 168
G LAT G +R ++DVD G H F + K + S+ F PD + L +G++D
Sbjct: 293 GKYLAT-GCNRSAQIYDVDTGKKVHAFVDESEKDGDLYIRSVCFSPDGN--YLATGAEDK 349
Query: 169 TVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPT 228
TV+VWD+ KK T H + S+ +SDG ++S DK +WD+ C T+
Sbjct: 350 TVKVWDIHTKKIQHTFYGHELDIYSLDYSSDGRFIVSGSGDKKAKIWDIEKGKCAFTLGN 409
Query: 229 YEM-----VEAVCAIPPG-----SAFDSFLSSYNQQT 255
E+ V +V P G + D+ + ++ QT
Sbjct: 410 EEVGPKNGVTSVAMSPDGRLVAAGSLDNIVRLWDAQT 446
Score = 152 (58.6 bits), Expect = 3.0e-06, Sum P(2) = 3.0e-06
Identities = 36/117 (30%), Positives = 53/117 (45%)
Query: 539 IWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGA 598
I SV FSP + T + DKT+K+W I TF GH + + + G IVS
Sbjct: 330 IRSVCFSPDGNYLATGAEDKTVKVWDIHTKKIQHTFYGHELDIYSLDYSSDGRFIVSGSG 389
Query: 599 DGLVKLWTVRTGECIATYDKHE----DKIWALAVGKKTEMFATGGSDALVNLWHDST 651
D K+W + G+C T E + + ++A+ + A G D +V LW T
Sbjct: 390 DKKAKIWDIEKGKCAFTLGNEEVGPKNGVTSVAMSPDGRLVAAGSLDNIVRLWDAQT 446
Score = 71 (30.1 bits), Expect = 6.1e-11, Sum P(2) = 6.1e-11
Identities = 31/156 (19%), Positives = 63/156 (40%)
Query: 275 IVRMWNADSACLYEQKSSDVTISFEMDDSKRGFTAATVLPSNQGLLCVTADQQLLLYTTV 334
IVR+W+A + E+ + + + F+ P + L + D+ L L+
Sbjct: 438 IVRLWDAQTGYFLERYEGHLDSVYSV-----AFS-----PDGKSLASGSLDKSLKLW--- 484
Query: 335 EVPEKKMELILSKRLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAG 394
++ + G+ + +L + F + +L + VQ +D + + +L G
Sbjct: 485 DLSGSRSRSRCRATFNGHKDFVLSVAF-SPDGSWLISGSKDRSVQFWDPRNGTTHMMLQG 543
Query: 395 HSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSES 430
H V+ + ++ + TGS D RLW +S
Sbjct: 544 HKNSVISVALSPKNNSHGVFATGSGDFRSRLWKYDS 579
Score = 37 (18.1 bits), Expect = 3.0e-06, Sum P(2) = 3.0e-06
Identities = 14/59 (23%), Positives = 25/59 (42%)
Query: 327 QLLLYTTVEVPEKKMELILSKRLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSS 385
QL T++ +E +K + Y EEI LK E++ A ++ + +S
Sbjct: 43 QLAELNTIQQTLYDLERGQNKMKIHYEEEIRQLKRQLEQQNINASQRDLNSPSTFRSNS 101
>FB|FBgn0040066 [details] [associations]
symbol:wds "will die slowly" species:7227 "Drosophila
melanogaster" [GO:0005671 "Ada2/Gcn5/Ada3 transcription activator
complex" evidence=IPI] [GO:0006338 "chromatin remodeling"
evidence=IDA] [GO:0004402 "histone acetyltransferase activity"
evidence=IDA] [GO:0016573 "histone acetylation" evidence=IDA]
[GO:0005875 "microtubule associated complex" evidence=IDA]
[GO:0007095 "mitotic G2 DNA damage checkpoint" evidence=IGI]
[GO:0048188 "Set1C/COMPASS complex" evidence=IDA] [GO:0022008
"neurogenesis" evidence=IMP] [GO:0051568 "histone H3-K4
methylation" evidence=IMP;IDA] [GO:0044665 "MLL1/2 complex"
evidence=ISS] [GO:0044666 "MLL3/4 complex" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005875 GO:GO:0007095 GO:GO:0022008 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 EMBL:AE014298
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005671
GO:GO:0048188 GO:GO:0051568 EMBL:AF233288 EMBL:AL138972
GO:GO:0044666 GeneTree:ENSGT00690000101787 KO:K14963 OMA:KLWKSDT
EMBL:AY118386 RefSeq:NP_001245503.1 RefSeq:NP_524984.1
UniGene:Dm.7137 ProteinModelPortal:Q9V3J8 SMR:Q9V3J8 IntAct:Q9V3J8
STRING:Q9V3J8 PaxDb:Q9V3J8 PRIDE:Q9V3J8 EnsemblMetazoa:FBtr0070438
EnsemblMetazoa:FBtr0308566 GeneID:53428 KEGG:dme:Dmel_CG17437
CTD:53428 FlyBase:FBgn0040066 InParanoid:Q9V3J8 OrthoDB:EOG4DNCM1
PhylomeDB:Q9V3J8 ChiTaRS:wds GenomeRNAi:53428 NextBio:841119
Bgee:Q9V3J8 GermOnline:CG17437 Uniprot:Q9V3J8
Length = 361
Score = 270 (100.1 bits), Expect = 1.8e-22, P = 1.8e-22
Identities = 58/178 (32%), Positives = 95/178 (53%)
Query: 439 GHMGAVGAVAFSKKLQNFLVSGSSDHTIKVW-SFDGLSDDAEQPMNLKAKAVVAAHGKDI 497
GH AV AV FS + +L S S+D IK+W ++DG K + ++ H I
Sbjct: 70 GHTKAVSAVKFSPNGE-WLASSSADKLIKIWGAYDG-----------KFEKTISGHKLGI 117
Query: 498 NSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGD 557
+ +A + + L+ +GS D+T VW L S+ T +GH ++ F+P ++++ S D
Sbjct: 118 SDVAWSSDSRLLVSGSDDKTLKVWELSTGKSLKTLKGHSNYVFCCNFNPQSNLIVSGSFD 177
Query: 558 KTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIAT 615
++++IW + G CLKT H+ V F G+ IVS DGL ++W +G+C+ T
Sbjct: 178 ESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKT 235
Score = 261 (96.9 bits), Expect = 1.2e-20, P = 1.2e-20
Identities = 52/165 (31%), Positives = 86/165 (52%)
Query: 483 NLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSV 542
N K +A H K ++++ +PN + + S D+ +W D T GHK GI V
Sbjct: 61 NYTLKFTLAGHTKAVSAVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDV 120
Query: 543 EFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLV 602
+S +++++ S DKT+K+W +S G LKT +GH++ V +F + IVS D V
Sbjct: 121 AWSSDSRLLVSGSDDKTLKVWELSTGKSLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESV 180
Query: 603 KLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLW 647
++W VRTG+C+ T H D + A+ + + + D L +W
Sbjct: 181 RIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIW 225
Score = 249 (92.7 bits), Expect = 7.4e-19, P = 7.4e-19
Identities = 60/200 (30%), Positives = 96/200 (48%)
Query: 28 SSDGSFIACACGES-INIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRV 86
S +G ++A + + I I + + TI G I+ +A S D +LL S + ++V
Sbjct: 81 SPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKV 140
Query: 87 WDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGV 146
W+LST K L++ KGH +P L+ + D V +WDV G C H
Sbjct: 141 WELSTGKSLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDP 200
Query: 147 VSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATL-DKHFSRVTSMAITSDGSTLIS 205
VS++ H + D SL+ S S D R+WD + +C+ TL D V+ + + +G +++
Sbjct: 201 VSAV--HFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILA 258
Query: 206 AGRDKVVNLWDLRDYSCKLT 225
A D + LWD C T
Sbjct: 259 ATLDNTLKLWDYSKGKCLKT 278
Score = 234 (87.4 bits), Expect = 5.7e-17, P = 5.7e-17
Identities = 52/178 (29%), Positives = 89/178 (50%)
Query: 49 NASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGM 108
N ++K T+ G + ++A+ SP+ + L SS + I++W K ++ GH +
Sbjct: 61 NYTLKFTLAGHTKAVSAVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDV 120
Query: 109 ACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDA 168
A LL + D+ + VW++ G KGH V F+P ++ L+ SGS D
Sbjct: 121 AWSSDSRLLVSGSDDKTLKVWELSTGKSLKTLKGHSNYVFCCNFNPQSN--LIVSGSFDE 178
Query: 169 TVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTV 226
+VR+WD+ KC+ TL H V+++ DGS ++S+ D + +WD C T+
Sbjct: 179 SVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTL 236
Score = 227 (85.0 bits), Expect = 4.0e-16, P = 4.0e-16
Identities = 81/345 (23%), Positives = 151/345 (43%)
Query: 269 TVGERGIVRMWNADSACLYEQK-SSDVTISFEMDDSKRGFTAATVLPSNQGLLCVTADQQ 327
+VG+ G N+ ++ + T+ F + + +A P+ + L +AD+
Sbjct: 36 SVGQPGATTSSNSSASNKSSLSVKPNYTLKFTLAGHTKAVSAVKFSPNGEWLASSSADKL 95
Query: 328 LLLYTTVEVPEKKMELILSKRLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMS 387
+ ++ + K E K + G+ I D+ + + + L ++ + ++V++LS+
Sbjct: 96 IKIWGAYD---GKFE----KTISGHKLGISDVAW-SSDSRLLVSGSDDKTLKVWELSTGK 147
Query: 388 CSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAV 447
L GHS V C C + LIV+GS D SVR+WD + C+ H V AV
Sbjct: 148 SLKTLKGHSNYVFC---CNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAV 204
Query: 448 AFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDS 507
F++ + +VS S D ++W D S K ++ ++ + +PN
Sbjct: 205 HFNRD-GSLIVSSSYDGLCRIW--DTASGQC-------LKTLIDDDNPPVSFVKFSPNGK 254
Query: 508 LVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSV--EFSPVD-QVVITASGDKTIKIWS 564
+ + D T +W + T+ GHK + + FS + +++ S D + IW+
Sbjct: 255 YILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNMVYIWN 314
Query: 565 ISDGSCLKTFEGHTSSVL-RASFLTRGAQIVSCGA---DGLVKLW 605
+ ++ +GHT +VL A T I++ A D +KLW
Sbjct: 315 LQSKEVVQKLQGHTDTVLCTACHPTEN--IIASAALENDKTIKLW 357
Score = 209 (78.6 bits), Expect = 5.0e-14, P = 5.0e-14
Identities = 57/195 (29%), Positives = 89/195 (45%)
Query: 25 LVVSSDGSFIACACGESINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREI 84
L+VS GSF ES+ I D+ T+ SD ++A+ + D L+ SS +
Sbjct: 170 LIVS--GSF-----DESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLC 222
Query: 85 RVWDLSTLKCLRSWKGHDGPAIGMA-CHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGH 143
R+WD ++ +CL++ D P + P+G + A D + +WD G C + GH
Sbjct: 223 RIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGH 282
Query: 144 KGVVSSILFHPD-TDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGST 202
K I + T + SGS+D V +W+L +K+ V L H V A +
Sbjct: 283 KNEKYCIFANFSVTGGKWIVSGSEDNMVYIWNLQSKEVVQKLQGHTDTVLCTACHPTENI 342
Query: 203 LISAG--RDKVVNLW 215
+ SA DK + LW
Sbjct: 343 IASAALENDKTIKLW 357
Score = 192 (72.6 bits), Expect = 4.3e-12, P = 4.3e-12
Identities = 51/155 (32%), Positives = 77/155 (49%)
Query: 100 GHDGPAIGMACHPSGGLLATAGADRKVLVWDV-DGGFCTHYFKGHKGVVSSILFHPDTDK 158
GH + P+G LA++ AD+ + +W DG F GHK +S + + +D
Sbjct: 70 GHTKAVSAVKFSPNGEWLASSSADKLIKIWGAYDGKF-EKTISGHKLGISDVAW--SSDS 126
Query: 159 SLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLR 218
LL SGSDD T++VW+L K + TL H + V + ++S D+ V +WD+R
Sbjct: 127 RLLVSGSDDKTLKVWELSTGKSLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVR 186
Query: 219 DYSCKLTVPTY-EMVEAVCAIPPGSAFDSFLSSYN 252
C T+P + + V AV GS S SSY+
Sbjct: 187 TGKCLKTLPAHSDPVSAVHFNRDGSLIVS--SSYD 219
Score = 172 (65.6 bits), Expect = 7.6e-10, P = 7.6e-10
Identities = 34/124 (27%), Positives = 61/124 (49%)
Query: 524 PDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLR 583
P+ T GH + + +V+FSP + + ++S DK IKIW DG KT GH +
Sbjct: 60 PNYTLKFTLAGHTKAVSAVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISD 119
Query: 584 ASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDAL 643
++ + +VS D +K+W + TG+ + T H + ++ ++ + +G D
Sbjct: 120 VAWSSDSRLLVSGSDDKTLKVWELSTGKSLKTLKGHSNYVFCCNFNPQSNLIVSGSFDES 179
Query: 644 VNLW 647
V +W
Sbjct: 180 VRIW 183
Score = 144 (55.7 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 67/305 (21%), Positives = 129/305 (42%)
Query: 183 TLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYEMVEAVCAIPPGS 242
TL H V+++ + +G L S+ DK++ +W D + T+ +++ + + S
Sbjct: 67 TLAGHTKAVSAVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKL--GISDVAWSS 124
Query: 243 AFDSFLSSYNQQTIKKKRRSLEIHFITVGERGIVRMWNADSACLYEQKSSDVTISFEMDD 302
+S + +T+K S T+ N C + +S+ + +S D+
Sbjct: 125 DSRLLVSGSDDKTLKVWELSTGKSLKTLKGHS-----NYVFCCNFNPQSN-LIVSGSFDE 178
Query: 303 SKRGFTAAT-----VLPSNQGLLCVT---ADQQLLLYTTVE----VPEKKMELILSKRLV 350
S R + T LP++ + D L++ ++ + + + L +
Sbjct: 179 SVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLID 238
Query: 351 GYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCL-DTCALSS 409
N + +KF +Y+ AT ++++D S C GH C+ +++
Sbjct: 239 DDNPPVSFVKF-SPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTG 297
Query: 410 GKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGS--SDHTIK 467
GK IV+GS+DN V +W+ +S+ V GH V A +N + S + +D TIK
Sbjct: 298 GK-WIVSGSEDNMVYIWNLQSKEVVQKLQGHTDTVLCTA-CHPTENIIASAALENDKTIK 355
Query: 468 VWSFD 472
+W D
Sbjct: 356 LWKSD 360
>POMBASE|SPBC713.04c [details] [associations]
symbol:SPBC713.04c "U3 snoRNP-associated protein Utp1
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0005730
"nucleolus" evidence=IDA] [GO:0005732 "small nucleolar
ribonucleoprotein complex" evidence=ISO] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006364 "rRNA processing" evidence=ISO]
[GO:0030515 "snoRNA binding" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 PomBase:SPBC713.04c GO:GO:0005829
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329671 GO:GO:0030515 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR011047
SUPFAM:SSF50998 GO:GO:0006364 GO:GO:0005732 HOGENOM:HOG000160363
KO:K14558 OMA:VWQCDTP InterPro:IPR027145 InterPro:IPR007148
PANTHER:PTHR19858 Pfam:PF04003 RefSeq:NP_595343.1
ProteinModelPortal:Q9C1X1 STRING:Q9C1X1 EnsemblFungi:SPBC713.04c.1
GeneID:2541182 KEGG:spo:SPBC713.04c OrthoDB:EOG4350F7
NextBio:20802294 Uniprot:Q9C1X1
Length = 854
Score = 250 (93.1 bits), Expect = 2.0e-22, Sum P(2) = 2.0e-22
Identities = 81/294 (27%), Positives = 134/294 (45%)
Query: 330 LYTTVEVPEKKMELILSKRLVGYNEEILDLKFLGEEEQYLAVATN-IEQVQVYDLSSMSC 388
L+ E+P M LS + N + L + G+ ++A+ ++ + Q+ V++ S S
Sbjct: 277 LFGIYELPSFTMLYQLS--ITQSNIDTLTVNSTGD---WIAIGSSKLGQLLVWEWQSES- 330
Query: 389 SYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVA 448
YVL S L T SS I+TG+ D +++WD S C+ T H AV +
Sbjct: 331 -YVLKQQSHYD-ALSTLQYSSDGQRIITGADDGKIKVWDMNSGFCIVTFTQHTSAVSGLC 388
Query: 449 FSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSL 508
FSK+ N L S S D +++ W D + N + A + +AV P+ +
Sbjct: 389 FSKR-GNVLFSSSLDGSVRAW-------DLIRYRNFRT--FTAPSRVQFSCIAVDPSGEI 438
Query: 509 VCTGSQDRTAC-VWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISD 567
VC GSQD +W + + T GH+ + S+ F+ ++ + S DKT++IW I
Sbjct: 439 VCAGSQDSFEIFMWSVQTGQLLETLAGHEGPVSSLSFNSSGSLLASGSWDKTVRIWDIFS 498
Query: 568 GSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHED 621
S + S VL +F G ++ DG + W V+ G+ + D +D
Sbjct: 499 RSGIVEPLPIPSDVLSLAFHPDGKEVCVASLDGQLTFWNVQEGKQTSLIDGRKD 552
Score = 167 (63.8 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 47/196 (23%), Positives = 88/196 (44%)
Query: 25 LVVSSDGSFIACACGE--SINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSR 82
L V+S G +IA + + + + + S + D ++ L S D + + +
Sbjct: 302 LTVNSTGDWIAIGSSKLGQLLVWEWQSESYVLKQQSHYDALSTLQYSSDGQRIITGADDG 361
Query: 83 EIRVWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKG 142
+I+VWD+++ C+ ++ H G+ G +L ++ D V WD+ F
Sbjct: 362 KIKVWDMNSGFCIVTFTQHTSAVSGLCFSKRGNVLFSSSLDGSVRAWDLIRYRNFRTFTA 421
Query: 143 HKGVVSSILFHPDTDKSLLFSGSDDA-TVRVWDLLAKKCVATLDKHFSRVTSMAITSDGS 201
V S + D ++ +GS D+ + +W + + + TL H V+S++ S GS
Sbjct: 422 PSRVQFSCIA-VDPSGEIVCAGSQDSFEIFMWSVQTGQLLETLAGHEGPVSSLSFNSSGS 480
Query: 202 TLISAGRDKVVNLWDL 217
L S DK V +WD+
Sbjct: 481 LLASGSWDKTVRIWDI 496
Score = 149 (57.5 bits), Expect = 2.0e-11, Sum P(2) = 2.0e-11
Identities = 41/159 (25%), Positives = 69/159 (43%)
Query: 496 DINSLAVAPNDSLVCTGSQDR-TACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITA 554
+I++L V + GS VW V+ + H + ++++S Q +IT
Sbjct: 298 NIDTLTVNSTGDWIAIGSSKLGQLLVWEWQSESYVLKQQSHYDALSTLQYSSDGQRIITG 357
Query: 555 SGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIA 614
+ D IK+W ++ G C+ TF HTS+V F RG + S DG V+ W +
Sbjct: 358 ADDGKIKVWDMNSGFCIVTFTQHTSAVSGLCFSKRGNVLFSSSLDGSVRAWDLIRYRNFR 417
Query: 615 TYDKHED-KIWALAVGKKTEMFATGGSDAL-VNLWHDST 651
T+ + +AV E+ G D+ + +W T
Sbjct: 418 TFTAPSRVQFSCIAVDPSGEIVCAGSQDSFEIFMWSVQT 456
Score = 148 (57.2 bits), Expect = 2.5e-11, Sum P(2) = 2.5e-11
Identities = 36/158 (22%), Positives = 72/158 (45%)
Query: 492 AHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVV 551
+H +++L + + + TG+ D VW + +VTF H + + FS V+
Sbjct: 337 SHYDALSTLQYSSDGQRIITGADDGKIKVWDMNSGFCIVTFTQHTSAVSGLCFSKRGNVL 396
Query: 552 ITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGA-DGL-VKLWTVRT 609
++S D +++ W + +TF + + +IV G+ D + +W+V+T
Sbjct: 397 FSSSLDGSVRAWDLIRYRNFRTFTAPSRVQFSCIAVDPSGEIVCAGSQDSFEIFMWSVQT 456
Query: 610 GECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLW 647
G+ + T HE + +L+ + A+G D V +W
Sbjct: 457 GQLLETLAGHEGPVSSLSFNSSGSLLASGSWDKTVRIW 494
Score = 147 (56.8 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 46/168 (27%), Positives = 73/168 (43%)
Query: 54 STIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPS 113
S + DT+T S D + S ++ VW+ + + + H +
Sbjct: 293 SITQSNIDTLTVN--STGDWIAIGSSKLGQLLVWEWQSESYVLKQQSHYDALSTLQYSSD 350
Query: 114 GGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVW 173
G + T D K+ VWD++ GFC F H VS + F ++LFS S D +VR W
Sbjct: 351 GQRIITGADDGKIKVWDMNSGFCIVTFTQHTSAVSGLCF--SKRGNVLFSSSLDGSVRAW 408
Query: 174 DLLAKKCVATLDKHFSRVTSMAITSDGS-TLISAG-RDKV-VNLWDLR 218
DL+ + T SRV I D S ++ AG +D + +W ++
Sbjct: 409 DLIRYRNFRTFTAP-SRVQFSCIAVDPSGEIVCAGSQDSFEIFMWSVQ 455
Score = 140 (54.3 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 58/273 (21%), Positives = 110/273 (40%)
Query: 394 GHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSES-----RCCVGVGTGHMGAVGAVA 448
GH + ++ + A S + I T SKD + RL + C + TGH V +
Sbjct: 144 GHFDDIVSISWSADS--RFFIST-SKDLTARLHSVDPIEGFHPCAL---TGHKNTVVSGF 197
Query: 449 FSKKLQNFLVSGSSDHTIKVWSFDGL-------SDDAEQPMN------LKAKAVVAAHGK 495
FSK Q + + S D + VW + L ++AE+ +K + + K
Sbjct: 198 FSKDQQT-IYTVSKDGALFVWKYSPLFQAGEVIDEEAEENKTRTHIWLIKERHYFNQNSK 256
Query: 496 DINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPV-DQVVITA 554
+ A P +L+ G ++ LP + + I ++ + D + I +
Sbjct: 257 -LRCAAFHPTSNLLVVGFSSGLFGIYELPSFTMLYQLSITQSNIDTLTVNSTGDWIAIGS 315
Query: 555 SGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIA 614
S + +W S + + H ++ + + G +I++ DG +K+W + +G CI
Sbjct: 316 SKLGQLLVWEWQSESYVLKQQSHYDALSTLQYSSDGQRIITGADDGKIKVWDMNSGFCIV 375
Query: 615 TYDKHEDKIWALAVGKKTEMFATGGSDALVNLW 647
T+ +H + L K+ + + D V W
Sbjct: 376 TFTQHTSAVSGLCFSKRGNVLFSSSLDGSVRAW 408
Score = 136 (52.9 bits), Expect = 2.9e-05, P = 2.9e-05
Identities = 40/176 (22%), Positives = 74/176 (42%)
Query: 67 ALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADR-K 125
A P LL S +++L + L + + +G +A + +
Sbjct: 261 AFHPTSNLLVVGFSSGLFGIYELPSFTMLYQLSITQSNIDTLTVNSTGDWIAIGSSKLGQ 320
Query: 126 VLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLD 185
+LVW+ + H +S++ + D + + +G+DD ++VWD+ + C+ T
Sbjct: 321 LLVWEWQSESYVLKQQSHYDALSTLQYSSDGQR--IITGADDGKIKVWDMNSGFCIVTFT 378
Query: 186 KHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYEMVEAVC-AIPP 240
+H S V+ + + G+ L S+ D V WDL Y T V+ C A+ P
Sbjct: 379 QHTSAVSGLCFSKRGNVLFSSSLDGSVRAWDLIRYRNFRTFTAPSRVQFSCIAVDP 434
Score = 127 (49.8 bits), Expect = 0.00027, P = 0.00027
Identities = 48/192 (25%), Positives = 86/192 (44%)
Query: 64 TALALSPDDKLLFS-SGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGA 122
+ +A+ P +++ + S S EI +W + T + L + GH+GP ++ + SG LLA+
Sbjct: 428 SCIAVDPSGEIVCAGSQDSFEIFMWSVQTGQLLETLAGHEGPVSSLSFNSSGSLLASGSW 487
Query: 123 DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVA 182
D+ V +WD+ V S+ FHPD K + + S D + W++ K +
Sbjct: 488 DKTVRIWDIFSRSGIVEPLPIPSDVLSLAFHPD-GKEVCVA-SLDGQLTFWNVQEGKQTS 545
Query: 183 TLDKHFSRVTSMAITSDGSTLISAGRDKV-VNLWDLRDYSCKLTVPTYEMVEAVCAIPPG 241
+D ++ D T ++ +K ++ D SC L+ T + V + I G
Sbjct: 546 LIDGR-KDLSGGRRFDDARTAENSSLNKTFTSICYSADGSCVLSAGTSKYV-CLYDIITG 603
Query: 242 SAFDSFLSSYNQ 253
F S N+
Sbjct: 604 VLIKKFQLSKNE 615
Score = 95 (38.5 bits), Expect = 2.0e-22, Sum P(2) = 2.0e-22
Identities = 49/222 (22%), Positives = 82/222 (36%)
Query: 6 LKKSYGCEPVLQQFYGGGPLVVSSDGSFIACACGESINIVDLS-NASIKSTIEGGSDTIT 64
+K +G ++ + G LV + DG I G +++ +L N S E + I+
Sbjct: 1 MKTEFGFSNLVGTIFSKGNLVFTPDGFSILSPVGNRVSVYNLKDNTSYTFPFENHKN-IS 59
Query: 65 ALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADR 124
+ALSP LL S + + L + P + P+G A + +
Sbjct: 60 HIALSPTSTLLLSVDEEGRCILCNFLRRSVLHYFN-FKSPVGAIEFSPNGKFFAVS-LGK 117
Query: 125 KVLVWDVDGG--------FCTHY-FKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVW-- 173
+ VW F H + GH + SI + D S S D T R+
Sbjct: 118 LIQVWRTPNSLEEREFAPFVLHREYTGHFDDIVSISW--SADSRFFISTSKDLTARLHSV 175
Query: 174 DLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLW 215
D + L H + V S + D T+ + +D + +W
Sbjct: 176 DPIEGFHPCALTGHKNTVVSGFFSKDQQTIYTVSKDGALFVW 217
Score = 37 (18.1 bits), Expect = 2.3e-16, Sum P(2) = 2.3e-16
Identities = 8/37 (21%), Positives = 17/37 (45%)
Query: 56 IEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTL 92
+ G +T+ + S D + +++ + VW S L
Sbjct: 186 LTGHKNTVVSGFFSKDQQTIYTVSKDGALFVWKYSPL 222
>DICTYBASE|DDB_G0286735 [details] [associations]
symbol:DDB_G0286735 "C3HC4-type zinc
finger-containing protein" species:44689 "Dictyostelium discoideum"
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR008974 InterPro:IPR013323
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00184 SMART:SM00320 dictyBase:DDB_G0286735 Prosite:PS00518
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0046872 GO:GO:0008270 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:AAFI02000089
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
InterPro:IPR017907 SUPFAM:SSF49599 Gene3D:3.90.890.10 KO:K10646
RefSeq:XP_637649.1 ProteinModelPortal:Q54LB2
EnsemblProtists:DDB0187121 GeneID:8625789 KEGG:ddi:DDB_G0286735
InParanoid:Q54LB2 OMA:NTNIMIC ProtClustDB:CLSZ2430092
Uniprot:Q54LB2
Length = 694
Score = 213 (80.0 bits), Expect = 2.1e-22, Sum P(2) = 2.1e-22
Identities = 60/192 (31%), Positives = 96/192 (50%)
Query: 40 ESINIVDLSNASIK--STIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRS 97
ES++IVDL +K T G + I + ++ + +L S ++++WDL TLKC +
Sbjct: 410 ESVDIVDLKIPQLKCKGTFVGHNGPIWCMTVT--NGMLISGSSDMKVKIWDLVTLKCKQV 467
Query: 98 WKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTD 157
GH+G +A G L + +D+ + VWD++ C + V + ++
Sbjct: 468 LSGHEGIVHTLAV--IGNRLFSGSSDQTIRVWDLETFECLSVLRDDNTVCALVIA----- 520
Query: 158 KSLLFSGSDDATVRVWDLLAKKCVATL--DKHFSRVTSMAITSDGSTLISAGRDKVVNLW 215
LFSGS ++VWDL +CV TL + H+ R A+T G L S G VV +W
Sbjct: 521 AGYLFSGSFQH-IKVWDLETFECVQTLKGNSHWVR----ALTVSGGYLYS-GAYNVVRVW 574
Query: 216 DLRDYSCKLTVP 227
DL ++ C T+P
Sbjct: 575 DLANFECVQTIP 586
Score = 196 (74.1 bits), Expect = 6.9e-12, P = 6.9e-12
Identities = 57/209 (27%), Positives = 104/209 (49%)
Query: 8 KSYGCEPVLQQFYGGGPLVVSSDGSFIACACGESINIVDLSNASIKSTIEGGSDTITALA 67
+++ C VL+ LV+++ ++ + I + DL T++G S + AL
Sbjct: 500 ETFECLSVLRDDNTVCALVIAA--GYLFSGSFQHIKVWDLETFECVQTLKGNSHWVRALT 557
Query: 68 LSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVL 127
+S L+S ++ +RVWDL+ +C+++ G G +A S L + ++
Sbjct: 558 VSGG--YLYSGAYN-VVRVWDLANFECVQTIPGGSGSIYSLAV--SNRRLLAGTYENTIV 612
Query: 128 VWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVW-DLLAKKCVATLDK 186
VW++D + +GH G V ++ +DK +SGS D+T++VW D L CV TL++
Sbjct: 613 VWNLDTFEIINKLEGHIGAVYTLAV---SDKKF-YSGSYDSTIKVWNDSLV--CVQTLNR 666
Query: 187 HFSRVTSMAITSDGSTLISAGRDKVVNLW 215
H S V S+ ++S + S D + +W
Sbjct: 667 HTSSVESIVVSS--GCVFSGSADNSIKVW 693
Score = 147 (56.8 bits), Expect = 9.0e-15, Sum P(2) = 9.0e-15
Identities = 34/102 (33%), Positives = 56/102 (54%)
Query: 373 TNIEQVQVYDLS--SMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSES 430
+N+E V + DL + C GH+ + C+ +++G ++++GS D V++WD +
Sbjct: 407 SNLESVDIVDLKIPQLKCKGTFVGHNGPIWCM---TVTNG--MLISGSSDMKVKIWDLVT 461
Query: 431 RCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFD 472
C V +GH G V +A + N L SGSSD TI+VW +
Sbjct: 462 LKCKQVLSGHEGIVHTLAV---IGNRLFSGSSDQTIRVWDLE 500
Score = 146 (56.5 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 52/191 (27%), Positives = 83/191 (43%)
Query: 136 CTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMA 195
C F GH G + + +L SGS D V++WDL+ KC L H V ++A
Sbjct: 424 CKGTFVGHNGPIWCMT----VTNGMLISGSSDMKVKIWDLVTLKCKQVLSGHEGIVHTLA 479
Query: 196 ITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYEMVEAVCAIPPGSAFD-SF------- 247
+ G+ L S D+ + +WDL + C L+V + I G F SF
Sbjct: 480 VI--GNRLFSGSSDQTIRVWDLETFEC-LSVLRDDNTVCALVIAAGYLFSGSFQHIKVWD 536
Query: 248 LSSYN-QQTIKKKR---RSLEIH--FITVGERGIVRMWN-ADSACLYEQKSSDVTISFEM 300
L ++ QT+K R+L + ++ G +VR+W+ A+ C+ +I + +
Sbjct: 537 LETFECVQTLKGNSHWVRALTVSGGYLYSGAYNVVRVWDLANFECVQTIPGGSGSI-YSL 595
Query: 301 DDSKRGFTAAT 311
S R A T
Sbjct: 596 AVSNRRLLAGT 606
Score = 132 (51.5 bits), Expect = 6.0e-05, P = 6.0e-05
Identities = 50/172 (29%), Positives = 84/172 (48%)
Query: 374 NIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCC 433
+ + ++V+DL + C L G+S V L +S G + +G+ N VR+WD + C
Sbjct: 528 SFQHIKVWDLETFECVQTLKGNSHWVRAL---TVSGG--YLYSGAY-NVVRVWDLANFEC 581
Query: 434 VGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAH 493
V G G++ ++A S + L++G+ ++TI VW+ D + +N K + + A
Sbjct: 582 VQTIPGGSGSIYSLAVSNRR---LLAGTYENTIVVWNLDTF-----EIIN-KLEGHIGA- 631
Query: 494 GKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFS 545
+ +LAV+ D +GS D T VW LV V T H + S+ S
Sbjct: 632 ---VYTLAVS--DKKFYSGSYDSTIKVWN-DSLVCVQTLNRHTSSVESIVVS 677
Score = 131 (51.2 bits), Expect = 2.1e-22, Sum P(2) = 2.1e-22
Identities = 45/145 (31%), Positives = 74/145 (51%)
Query: 378 VQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVG 437
V+V+DL++ C + G S + L A+S+ ++L G+ +N++ +W+ ++ +
Sbjct: 571 VRVWDLANFECVQTIPGGSGSIYSL---AVSNRRLL--AGTYENTIVVWNLDTFEIINKL 625
Query: 438 TGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDI 497
GH+GAV +A S K F SGS D TIKVW+ D L Q +N H +
Sbjct: 626 EGHIGAVYTLAVSDK--KFY-SGSYDSTIKVWN-DSLV--CVQTLN--------RHTSSV 671
Query: 498 NSLAVAPNDSLVCTGSQDRTACVWR 522
S+ V+ V +GS D + VW+
Sbjct: 672 ESIVVS--SGCVFSGSADNSIKVWK 694
Score = 130 (50.8 bits), Expect = 9.9e-05, P = 9.9e-05
Identities = 49/175 (28%), Positives = 86/175 (49%)
Query: 482 MNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWS 541
+ LK K V++ H +++LAV N + +GS D+T VW L + R
Sbjct: 460 VTLKCKQVLSGHEGIVHTLAVIGNR--LFSGSSDQTIRVWDLETFECLSVLR-------- 509
Query: 542 VEFSPVDQVVITA----SGD-KTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSC 596
+ + V +VI A SG + IK+W + C++T +G++ V RA ++ G + S
Sbjct: 510 -DDNTVCALVIAAGYLFSGSFQHIKVWDLETFECVQTLKGNSHWV-RALTVS-GGYLYS- 565
Query: 597 GADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLWHDST 651
GA +V++W + EC+ T I++LAV + + A G + + +W+ T
Sbjct: 566 GAYNVVRVWDLANFECVQTIPGGSGSIYSLAVSNR-RLLA-GTYENTIVVWNLDT 618
Score = 127 (49.8 bits), Expect = 9.0e-15, Sum P(2) = 9.0e-15
Identities = 42/190 (22%), Positives = 82/190 (43%)
Query: 464 HTIKVWS---FDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACV 520
HT+ V F G SD + +L+ ++ D A+ + +GS V
Sbjct: 476 HTLAVIGNRLFSGSSDQTIRVWDLETFECLSVLRDDNTVCALVIAAGYLFSGSFQHIK-V 534
Query: 521 WRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSS 580
W L V T +G+ W V V + + +++W +++ C++T G + S
Sbjct: 535 WDLETFECVQTLKGNSH--W-VRALTVSGGYLYSGAYNVVRVWDLANFECVQTIPGGSGS 591
Query: 581 VLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGS 640
+ + R ++++ + + +W + T E I + H ++ LAV K F +G
Sbjct: 592 IYSLAVSNR--RLLAGTYENTIVVWNLDTFEIINKLEGHIGAVYTLAVSDKK--FYSGSY 647
Query: 641 DALVNLWHDS 650
D+ + +W+DS
Sbjct: 648 DSTIKVWNDS 657
Score = 123 (48.4 bits), Expect = 0.00057, P = 0.00057
Identities = 31/126 (24%), Positives = 62/126 (49%)
Query: 522 RLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSV 581
++P L TF GH IW + + + ++I+ S D +KIW + C + GH V
Sbjct: 418 KIPQLKCKGTFVGHNGPIWCMTVT--NGMLISGSSDMKVKIWDLVTLKCKQVLSGHEGIV 475
Query: 582 LRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSD 641
+ + G ++ S +D +++W + T EC++ + ++ + AL + +F+ GS
Sbjct: 476 HTLAVI--GNRLFSGSSDQTIRVWDLETFECLSVL-RDDNTVCALVIAAGY-LFS--GSF 529
Query: 642 ALVNLW 647
+ +W
Sbjct: 530 QHIKVW 535
Score = 120 (47.3 bits), Expect = 1.3e-10, Sum P(2) = 1.3e-10
Identities = 32/96 (33%), Positives = 52/96 (54%)
Query: 377 QVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGV 436
+V+++DL ++ C VL+GH IV T A+ ++ +GS D ++R+WD E+ C+ V
Sbjct: 453 KVKIWDLVTLKCKQVLSGHEGIV---HTLAVIGNRLF--SGSSDQTIRVWDLETFECLSV 507
Query: 437 GTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFD 472
V A+ + +L SGS H IKVW +
Sbjct: 508 LRDD-NTVCALVIAA---GYLFSGSFQH-IKVWDLE 538
Score = 115 (45.5 bits), Expect = 1.6e-13, Sum P(2) = 1.6e-13
Identities = 44/192 (22%), Positives = 84/192 (43%)
Query: 456 FLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQD 515
+L SGS H IKVW + E LK + H + +L V+ + +G+ +
Sbjct: 523 YLFSGSFQH-IKVWDLETF----ECVQTLKGNS----HW--VRALTVS--GGYLYSGAYN 569
Query: 516 RTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFE 575
VW L + V T G I+S+ S ++ ++ + + TI +W++ + E
Sbjct: 570 -VVRVWDLANFECVQTIPGGSGSIYSLAVS--NRRLLAGTYENTIVVWNLDTFEIINKLE 626
Query: 576 GHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMF 635
GH +V + + + S D +K+W C+ T ++H + ++ V +F
Sbjct: 627 GHIGAVYTLAVSDK--KFYSGSYDSTIKVWNDSL-VCVQTLNRHTSSVESIVVSSGC-VF 682
Query: 636 ATGGSDALVNLW 647
+ G +D + +W
Sbjct: 683 S-GSADNSIKVW 693
>UNIPROTKB|H9L3L2 [details] [associations]
symbol:LOC100859596 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005198 "structural molecule activity"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0030126 "COPI vesicle coat" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006692
InterPro:IPR010714 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053
Pfam:PF06957 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0006886 GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005198 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0030126 InterPro:IPR016391 PIRSF:PIRSF003354
GeneTree:ENSGT00600000084501 EMBL:AADN02074020 EMBL:AADN02074019
Ensembl:ENSGALT00000040760 Uniprot:H9L3L2
Length = 1134
Score = 218 (81.8 bits), Expect = 5.8e-14, P = 5.8e-14
Identities = 60/218 (27%), Positives = 104/218 (47%)
Query: 377 QVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGV 436
+++V++ C + L GH + + T I++ S D ++R+W+ +SR CV V
Sbjct: 74 KIKVWNYKLRRCLFTLLGHLDYIR---TTFFHHEYPWILSASDDQTIRVWNWQSRTCVCV 130
Query: 437 GTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGL-----------SD-------DA 478
TGH V F ++ +VS S D T++VW GL SD D
Sbjct: 131 LTGHNHYVMCAQFHPS-EDLVVSASLDQTVRVWDISGLRKKNLSPGAVESDVRGITGVDL 189
Query: 479 EQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVS--VVTFRGHK 536
+ K V+ H + +N A P L+ +G+ DR +WR+ + + V T RGH
Sbjct: 190 FGTTDAVVKHVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNESKAWEVDTCRGHY 249
Query: 537 RGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTF 574
+ F P +++++ S DK+I++W +S + ++TF
Sbjct: 250 NNVSCAVFHPRQELILSNSEDKSIRVWDMSKRTGVQTF 287
Score = 198 (74.8 bits), Expect = 3.1e-22, Sum P(2) = 3.1e-22
Identities = 45/161 (27%), Positives = 71/161 (44%)
Query: 57 EGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPSGGL 116
E S + L+ P + +S H+ I++WD + + HDGP G+ H L
Sbjct: 6 ETKSARVKGLSFHPKRPWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFHKQQPL 65
Query: 117 LATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLL 176
+ G D K+ VW+ C GH + + FH + + S SDD T+RVW+
Sbjct: 66 FVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYP--WILSASDDQTIRVWNWQ 123
Query: 177 AKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDL 217
++ CV L H V ++SA D+ V +WD+
Sbjct: 124 SRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDI 164
Score = 151 (58.2 bits), Expect = 3.1e-22, Sum P(2) = 3.1e-22
Identities = 35/125 (28%), Positives = 62/125 (49%)
Query: 525 DLVSVVTFRGHKRGI-WSVEFSPVDQVVITASGDKTIKIWSISDGSC--LKTFEGHTSSV 581
D V GH RG+ W+ F P ++++ + D+ +KIW +++ + T GH ++V
Sbjct: 194 DAVVKHVLEGHDRGVNWAA-FHPTMPLIVSGADDRQVKIWRMNESKAWEVDTCRGHYNNV 252
Query: 582 LRASFLTRGAQIVSCGADGLVKLWTV--RTGECIATYDKHEDKIWALAVGKKTEMFATGG 639
A F R I+S D +++W + RTG + T+ + D+ W LA +FA G
Sbjct: 253 SCAVFHPRQELILSNSEDKSIRVWDMSKRTG--VQTFRRDHDRFWVLAAHPNLNLFAAGH 310
Query: 640 SDALV 644
++
Sbjct: 311 DGGMI 315
Score = 147 (56.8 bits), Expect = 2.7e-06, P = 2.7e-06
Identities = 58/235 (24%), Positives = 95/235 (40%)
Query: 414 IVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDG 473
I+T + ++LWD + H G V + F K+ Q VSG D+ IKVW++
Sbjct: 24 ILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFHKQ-QPLFVSGGDDYKIKVWNYK- 81
Query: 474 LSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFR 533
L + + H I + + + S D+T VW V
Sbjct: 82 LR---------RCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVWNWQSRTCVCVLT 132
Query: 534 GHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFE-GHTSSVLRASFLTRGAQ 592
GH + +F P + +V++AS D+T+++W IS G K G S +R +T G
Sbjct: 133 GHNHYVMCAQFHPSEDLVVSASLDQTVRVWDIS-GLRKKNLSPGAVESDVRG--IT-GVD 188
Query: 593 IVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLW 647
+ D +VK + +D+ + WA A + +G D V +W
Sbjct: 189 LFGT-TDAVVK-------HVLEGHDRGVN--WA-AFHPTMPLIVSGADDRQVKIW 232
Score = 139 (54.0 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 63/287 (21%), Positives = 125/287 (43%)
Query: 107 GMACHPSGGLLATAGADRKVLVWDVDGGFCT--HYFKGHKGVVSSILFHPDTDKSLLFSG 164
G++ HP + T+ + + +WD CT F H G V I FH + L SG
Sbjct: 14 GLSFHPKRPWILTSLHNGVIQLWDYR--MCTLIDKFDEHDGPVRGIDFHKQ--QPLFVSG 69
Query: 165 SDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKL 224
DD ++VW+ ++C+ TL H + + + ++SA D+ + +W+ + +C +
Sbjct: 70 GDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVWNWQSRTC-V 128
Query: 225 TVPTYEMVEAVCA-IPPGSAFDSFLSSYNQQTIKK------KRRSLEIHFITVGERGIVR 277
V T +CA P D +S+ QT++ ++++L + RGI
Sbjct: 129 CVLTGHNHYVMCAQFHPSE--DLVVSASLDQTVRVWDISGLRKKNLSPGAVESDVRGIT- 185
Query: 278 MWNADSACLYEQKSSDVTISFEMDDSKRGFTAATVLPSNQGLLCVTADQQLLLYTTVEVP 337
D L+ ++D + ++ RG A P+ ++ D+Q+ ++ E
Sbjct: 186 --GVD---LFG--TTDAVVKHVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNE-- 236
Query: 338 EKKMELILSKRLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLS 384
K E+ + G+ + F +E L+ + + + ++V+D+S
Sbjct: 237 SKAWEVDTCR---GHYNNVSCAVFHPRQELILSNSED-KSIRVWDMS 279
Score = 131 (51.2 bits), Expect = 0.00014, P = 0.00014
Identities = 34/113 (30%), Positives = 54/113 (47%)
Query: 99 KGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHY--FKGHKGVVSSILFHPDT 156
+GHD A HP+ L+ + DR+V +W ++ +GH VS +FHP
Sbjct: 202 EGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNESKAWEVDTCRGHYNNVSCAVFHPRQ 261
Query: 157 DKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRD 209
+ L+ S S+D ++RVWD+ + V T + R +A L +AG D
Sbjct: 262 E--LILSNSEDKSIRVWDMSKRTGVQTFRRDHDRFWVLA-AHPNLNLFAAGHD 311
Score = 126 (49.4 bits), Expect = 0.00049, P = 0.00049
Identities = 41/180 (22%), Positives = 76/180 (42%)
Query: 40 ESINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWK 99
++I + + + + + G + + P + L+ S+ + +RVWD+S L+ K
Sbjct: 115 QTIRVWNWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDISGLR-----K 169
Query: 100 GHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKS 159
+ P G G+ G D ++ H +GH V+ FHP
Sbjct: 170 KNLSP--GAVESDVRGI---TGVD----LFGTTDAVVKHVLEGHDRGVNWAAFHPTMP-- 218
Query: 160 LLFSGSDDATVRVWDLLAKKC--VATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDL 217
L+ SG+DD V++W + K V T H++ V+ ++S DK + +WD+
Sbjct: 219 LIVSGADDRQVKIWRMNESKAWEVDTCRGHYNNVSCAVFHPRQELILSNSEDKSIRVWDM 278
Score = 99 (39.9 bits), Expect = 9.3e-12, Sum P(2) = 9.3e-12
Identities = 23/79 (29%), Positives = 37/79 (46%)
Query: 55 TIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPSG 114
T+ G D I + + S+ + IRVW+ + C+ GH+ + HPS
Sbjct: 88 TLLGHLDYIRTTFFHHEYPWILSASDDQTIRVWNWQSRTCVCVLTGHNHYVMCAQFHPSE 147
Query: 115 GLLATAGADRKVLVWDVDG 133
L+ +A D+ V VWD+ G
Sbjct: 148 DLVVSASLDQTVRVWDISG 166
>UNIPROTKB|P49027 [details] [associations]
symbol:RACK1A "Guanine nucleotide-binding protein subunit
beta-like protein A" species:39947 "Oryza sativa Japonica Group"
[GO:0005515 "protein binding" evidence=IPI] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0050832 "defense response to fungus" evidence=IMP] [GO:0060267
"positive regulation of respiratory burst" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005886 GO:GO:0005737 GO:GO:0009507 GO:GO:0046686
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0050832 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0048364 GO:GO:0004871 GO:GO:0048367
GO:GO:0022626 EMBL:AP008207 EMBL:CM000138 HOGENOM:HOG000091643
KO:K14753 OMA:IRVWQVM ProtClustDB:CLSN2682135 EMBL:D38231
EMBL:AP003452 EMBL:AK060428 EMBL:AK098893 EMBL:AK121587 PIR:T03764
RefSeq:NP_001043910.1 UniGene:Os.4684 ProteinModelPortal:P49027
SMR:P49027 STRING:P49027 PRIDE:P49027
EnsemblPlants:LOC_Os01g49290.1 GeneID:4324115
KEGG:dosa:Os01t0686800-02 KEGG:osa:4324115 Gramene:P49027
GO:GO:0060267 Uniprot:P49027
Length = 334
Score = 245 (91.3 bits), Expect = 3.3e-22, Sum P(2) = 3.3e-22
Identities = 59/191 (30%), Positives = 94/191 (49%)
Query: 56 IEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPSGG 115
+ G S + + LS D + S E+R+WDLST R + GHD + +A
Sbjct: 71 LTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLSTGVTTRRFVGHDKDVLSVAFSVDNR 130
Query: 116 LLATAGADRKVLVWDVDGGFCTHYF-------KGHKGVVSSILFHPDTDKSLLFSGSDDA 168
+ +A DR + +W+ G C + +GH G VS + F P+T + + SGS D
Sbjct: 131 QIVSASRDRTIKLWNTLGE-CKYTIGGDLGGGEGHNGWVSCVRFSPNTFQPTIVSGSWDR 189
Query: 169 TVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPT 228
TV+VW+L K L+ H V ++A++ DGS S G+D V LWDL + ++
Sbjct: 190 TVKVWNLTNCKLRCNLEGHGGYVNAVAVSPDGSLCASGGKDGVTLLWDLAEGKRLYSLDA 249
Query: 229 YEMVEAVCAIP 239
++ ++C P
Sbjct: 250 GSIIHSLCFSP 260
Score = 207 (77.9 bits), Expect = 5.6e-14, P = 5.6e-14
Identities = 65/232 (28%), Positives = 100/232 (43%)
Query: 429 ESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKA 488
ES GV GH V A+A F+VS S D ++ VW + +
Sbjct: 6 ESLVLAGVMHGHNDVVTAIATPIDNSPFIVSSSRDKSLLVWDLTNPVQNVGEGAGASEYG 65
Query: 489 V----VAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEF 544
V + H + + ++ + +GS D +W L V+ F GH + + SV F
Sbjct: 66 VPFRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLSTGVTTRRFVGHDKDVLSVAF 125
Query: 545 SPVDQVVITASGDKTIKIWSISDGSCLKTF-------EGHTS--SVLRASFLTRGAQIVS 595
S ++ +++AS D+TIK+W+ G C T EGH S +R S T IVS
Sbjct: 126 SVDNRQIVSASRDRTIKLWNTL-GECKYTIGGDLGGGEGHNGWVSCVRFSPNTFQPTIVS 184
Query: 596 CGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLW 647
D VK+W + + + H + A+AV + A+GG D + LW
Sbjct: 185 GSWDRTVKVWNLTNCKLRCNLEGHGGYVNAVAVSPDGSLCASGGKDGVTLLW 236
Score = 180 (68.4 bits), Expect = 7.5e-11, P = 7.5e-11
Identities = 68/255 (26%), Positives = 116/255 (45%)
Query: 385 SMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCC-VGVG------ 437
S+ + V+ GH+++V + T +S IV+ S+D S+ +WD + VG G
Sbjct: 7 SLVLAGVMHGHNDVVTAIATPIDNSP--FIVSSSRDKSLLVWDLTNPVQNVGEGAGASEY 64
Query: 438 -------TGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVV 490
TGH V V S Q F +SGS D +++W LS + + V
Sbjct: 65 GVPFRRLTGHSHFVQDVVLSSDGQ-FALSGSWDGELRLWD---LST------GVTTRRFV 114
Query: 491 AAHGKDINSLAVAPNDSLVCTGSQDRTACVWR-LPDLVSVVTF-----RGHKRGIWSVEF 544
H KD+ S+A + ++ + + S+DRT +W L + + GH + V F
Sbjct: 115 G-HDKDVLSVAFSVDNRQIVSASRDRTIKLWNTLGECKYTIGGDLGGGEGHNGWVSCVRF 173
Query: 545 SP--VDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLV 602
SP +++ S D+T+K+W++++ EGH V + G+ S G DG+
Sbjct: 174 SPNTFQPTIVSGSWDRTVKVWNLTNCKLRCNLEGHGGYVNAVAVSPDGSLCASGGKDGVT 233
Query: 603 KLWTVRTGECIATYD 617
LW + G+ + + D
Sbjct: 234 LLWDLAEGKRLYSLD 248
Score = 166 (63.5 bits), Expect = 2.9e-09, P = 2.9e-09
Identities = 64/247 (25%), Positives = 106/247 (42%)
Query: 25 LVVSSDGSFIACACGES-INIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSRE 83
+V+SSDG F + + + DLS G + ++A S D++ + S+ R
Sbjct: 81 VVLSSDGQFALSGSWDGELRLWDLSTGVTTRRFVGHDKDVLSVAFSVDNRQIVSASRDRT 140
Query: 84 IRVWD-LSTLKC-----LRSWKGHDGPAIGMACHPSG--GLLATAGADRKVLVWDVDGGF 135
I++W+ L K L +GH+G + P+ + + DR V VW++
Sbjct: 141 IKLWNTLGECKYTIGGDLGGGEGHNGWVSCVRFSPNTFQPTIVSGSWDRTVKVWNLTNCK 200
Query: 136 CTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMA 195
+GH G V+++ PD SL SG D +WDL K + +LD S + S+
Sbjct: 201 LRCNLEGHGGYVNAVAVSPDG--SLCASGGKDGVTLLWDLAEGKRLYSLDAG-SIIHSLC 257
Query: 196 ITSDGSTLISAGRDKVVNLWDLRD----YSCKLTVPTYEMVEAVCAIPPGSAFDSFL-SS 250
+ + L +A +D + +WDL K +P + C SA S L +
Sbjct: 258 FSPNRYWLCAATQDSI-KIWDLESKHIVQDLKPEIPVSKNQMLYCTSLNWSADGSTLYAG 316
Query: 251 YNQQTIK 257
Y TI+
Sbjct: 317 YTDGTIR 323
Score = 161 (61.7 bits), Expect = 1.0e-08, P = 1.0e-08
Identities = 46/174 (26%), Positives = 84/174 (48%)
Query: 57 EGGSDTITALALSPD--DKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPSG 114
EG + ++ + SP+ + S R ++VW+L+ K + +GH G +A P G
Sbjct: 162 EGHNGWVSCVRFSPNTFQPTIVSGSWDRTVKVWNLTNCKLRCNLEGHGGYVNAVAVSPDG 221
Query: 115 GLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWD 174
L A+ G D L+WD+ G Y ++ S+ F P+ + L + + D+ +++WD
Sbjct: 222 SLCASGGKDGVTLLWDLAEGKRL-YSLDAGSIIHSLCFSPN--RYWLCAATQDS-IKIWD 277
Query: 175 LLAKKCVATLDKHF--SR-----VTSMAITSDGSTLISAGRDKVVNLWDLRDYS 221
L +K V L S+ TS+ ++DGSTL + D + ++ + +S
Sbjct: 278 LESKHIVQDLKPEIPVSKNQMLYCTSLNWSADGSTLYAGYTDGTIRIYKISGFS 331
Score = 140 (54.3 bits), Expect = 8.2e-07, Sum P(2) = 8.2e-07
Identities = 53/216 (24%), Positives = 96/216 (44%)
Query: 52 IKSTIEGGSDTITALALSPDDK-LLFSSGHSREIRVWDLST-LKCLRSWKG---HDGPAI 106
+ + G +D +TA+A D+ + SS + + VWDL+ ++ + G + P
Sbjct: 10 LAGVMHGHNDVVTAIATPIDNSPFIVSSSRDKSLLVWDLTNPVQNVGEGAGASEYGVPFR 69
Query: 107 GMACHP---------SGGLLATAGA-DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDT 156
+ H S G A +G+ D ++ +WD+ G T F GH V S+ F
Sbjct: 70 RLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLSTGVTTRRFVGHDKDVLSVAF--SV 127
Query: 157 DKSLLFSGSDDATVRVWDLLAKKCVATL-------DKHFSRVTSMAITSDG--STLISAG 207
D + S S D T+++W+ L + C T+ + H V+ + + + T++S
Sbjct: 128 DNRQIVSASRDRTIKLWNTLGE-CKYTIGGDLGGGEGHNGWVSCVRFSPNTFQPTIVSGS 186
Query: 208 RDKVVNLWDLRDYSCKLTVPTYE-MVEAVCAIPPGS 242
D+ V +W+L + + + + V AV P GS
Sbjct: 187 WDRTVKVWNLTNCKLRCNLEGHGGYVNAVAVSPDGS 222
Score = 121 (47.7 bits), Expect = 0.00030, P = 0.00030
Identities = 56/238 (23%), Positives = 106/238 (44%)
Query: 344 ILSKRLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAG-------HS 396
+ ++R VG+++++L + F + Q ++ A+ +++++ C Y + G H+
Sbjct: 108 VTTRRFVGHDKDVLSVAFSVDNRQIVS-ASRDRTIKLWNTLG-ECKYTIGGDLGGGEGHN 165
Query: 397 EIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVGT-GHMGAVGAVAFSKKLQN 455
V C+ + ++ + IV+GS D +V++W+ + C + GH G V AVA S +
Sbjct: 166 GWVSCV-RFSPNTFQPTIVSGSWDRTVKVWNL-TNCKLRCNLEGHGGYVNAVAVSPD-GS 222
Query: 456 FLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQD 515
SG D +W + ++ +L A G I+SL +PN +C +QD
Sbjct: 223 LCASGGKDGVTLLWDLA----EGKRLYSLDA-------GSIIHSLCFSPNRYWLCAATQD 271
Query: 516 RTACVWRLP------DLV-SVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSIS 566
+W L DL + + S+ +S + D TI+I+ IS
Sbjct: 272 SIK-IWDLESKHIVQDLKPEIPVSKNQMLYCTSLNWSADGSTLYAGYTDGTIRIYKIS 328
Score = 119 (46.9 bits), Expect = 0.00049, P = 0.00049
Identities = 36/141 (25%), Positives = 64/141 (45%)
Query: 41 SINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKG 100
++ + +L+N ++ +EG + A+A+SPD L S G +WDL+ K L S
Sbjct: 190 TVKVWNLTNCKLRCNLEGHGGYVNAVAVSPDGSLCASGGKDGVTLLWDLAEGKRLYSLDA 249
Query: 101 HDGPAIGMACH-PSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDT--- 156
G I C P+ L A D + +WD++ K V + + + +
Sbjct: 250 --GSIIHSLCFSPNRYWLCAATQD-SIKIWDLESKHIVQDLKPEIPVSKNQMLYCTSLNW 306
Query: 157 --DKSLLFSGSDDATVRVWDL 175
D S L++G D T+R++ +
Sbjct: 307 SADGSTLYAGYTDGTIRIYKI 327
Score = 47 (21.6 bits), Expect = 3.3e-22, Sum P(2) = 3.3e-22
Identities = 26/103 (25%), Positives = 47/103 (45%)
Query: 380 VYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVG---- 435
++DL+ Y L S I+ L C S + + ++D S+++WD ES+ V
Sbjct: 235 LWDLAEGKRLYSLDAGS-IIHSL--C-FSPNRYWLCAATQD-SIKIWDLESKHIVQDLKP 289
Query: 436 ---VGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLS 475
V M ++ +S + L +G +D TI+++ G S
Sbjct: 290 EIPVSKNQMLYCTSLNWSAD-GSTLYAGYTDGTIRIYKISGFS 331
>UNIPROTKB|H9KZL3 [details] [associations]
symbol:LOC100859596 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005198 "structural molecule activity"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0030126 "COPI vesicle coat" evidence=IEA]
[GO:0005615 "extracellular space" evidence=IEA] [GO:0030157
"pancreatic juice secretion" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR010714
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053 Pfam:PF06957
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0006886
GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005198 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030126 InterPro:IPR016391 PIRSF:PIRSF003354
GeneTree:ENSGT00600000084501 EMBL:AADN02074020 EMBL:AADN02074019
Ensembl:ENSGALT00000014909 OMA:ENSVLLC Uniprot:H9KZL3
Length = 1169
Score = 218 (81.8 bits), Expect = 6.1e-14, P = 6.1e-14
Identities = 60/218 (27%), Positives = 104/218 (47%)
Query: 377 QVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGV 436
+++V++ C + L GH + + T I++ S D ++R+W+ +SR CV V
Sbjct: 74 KIKVWNYKLRRCLFTLLGHLDYIR---TTFFHHEYPWILSASDDQTIRVWNWQSRTCVCV 130
Query: 437 GTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGL-----------SD-------DA 478
TGH V F ++ +VS S D T++VW GL SD D
Sbjct: 131 LTGHNHYVMCAQFHPS-EDLVVSASLDQTVRVWDISGLRKKNLSPGAVESDVRGITGVDL 189
Query: 479 EQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVS--VVTFRGHK 536
+ K V+ H + +N A P L+ +G+ DR +WR+ + + V T RGH
Sbjct: 190 FGTTDAVVKHVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNESKAWEVDTCRGHY 249
Query: 537 RGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTF 574
+ F P +++++ S DK+I++W +S + ++TF
Sbjct: 250 NNVSCAVFHPRQELILSNSEDKSIRVWDMSKRTGVQTF 287
Score = 198 (74.8 bits), Expect = 3.4e-22, Sum P(2) = 3.4e-22
Identities = 45/161 (27%), Positives = 71/161 (44%)
Query: 57 EGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPSGGL 116
E S + L+ P + +S H+ I++WD + + HDGP G+ H L
Sbjct: 6 ETKSARVKGLSFHPKRPWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFHKQQPL 65
Query: 117 LATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLL 176
+ G D K+ VW+ C GH + + FH + + S SDD T+RVW+
Sbjct: 66 FVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYP--WILSASDDQTIRVWNWQ 123
Query: 177 AKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDL 217
++ CV L H V ++SA D+ V +WD+
Sbjct: 124 SRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDI 164
Score = 151 (58.2 bits), Expect = 3.4e-22, Sum P(2) = 3.4e-22
Identities = 35/125 (28%), Positives = 62/125 (49%)
Query: 525 DLVSVVTFRGHKRGI-WSVEFSPVDQVVITASGDKTIKIWSISDGSC--LKTFEGHTSSV 581
D V GH RG+ W+ F P ++++ + D+ +KIW +++ + T GH ++V
Sbjct: 194 DAVVKHVLEGHDRGVNWAA-FHPTMPLIVSGADDRQVKIWRMNESKAWEVDTCRGHYNNV 252
Query: 582 LRASFLTRGAQIVSCGADGLVKLWTV--RTGECIATYDKHEDKIWALAVGKKTEMFATGG 639
A F R I+S D +++W + RTG + T+ + D+ W LA +FA G
Sbjct: 253 SCAVFHPRQELILSNSEDKSIRVWDMSKRTG--VQTFRRDHDRFWVLAAHPNLNLFAAGH 310
Query: 640 SDALV 644
++
Sbjct: 311 DGGMI 315
Score = 147 (56.8 bits), Expect = 2.8e-06, P = 2.8e-06
Identities = 58/235 (24%), Positives = 95/235 (40%)
Query: 414 IVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDG 473
I+T + ++LWD + H G V + F K+ Q VSG D+ IKVW++
Sbjct: 24 ILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFHKQ-QPLFVSGGDDYKIKVWNYK- 81
Query: 474 LSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFR 533
L + + H I + + + S D+T VW V
Sbjct: 82 LR---------RCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVWNWQSRTCVCVLT 132
Query: 534 GHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFE-GHTSSVLRASFLTRGAQ 592
GH + +F P + +V++AS D+T+++W IS G K G S +R +T G
Sbjct: 133 GHNHYVMCAQFHPSEDLVVSASLDQTVRVWDIS-GLRKKNLSPGAVESDVRG--IT-GVD 188
Query: 593 IVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLW 647
+ D +VK + +D+ + WA A + +G D V +W
Sbjct: 189 LFGT-TDAVVK-------HVLEGHDRGVN--WA-AFHPTMPLIVSGADDRQVKIW 232
Score = 139 (54.0 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 63/287 (21%), Positives = 125/287 (43%)
Query: 107 GMACHPSGGLLATAGADRKVLVWDVDGGFCT--HYFKGHKGVVSSILFHPDTDKSLLFSG 164
G++ HP + T+ + + +WD CT F H G V I FH + L SG
Sbjct: 14 GLSFHPKRPWILTSLHNGVIQLWDYR--MCTLIDKFDEHDGPVRGIDFHKQ--QPLFVSG 69
Query: 165 SDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKL 224
DD ++VW+ ++C+ TL H + + + ++SA D+ + +W+ + +C +
Sbjct: 70 GDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVWNWQSRTC-V 128
Query: 225 TVPTYEMVEAVCA-IPPGSAFDSFLSSYNQQTIKK------KRRSLEIHFITVGERGIVR 277
V T +CA P D +S+ QT++ ++++L + RGI
Sbjct: 129 CVLTGHNHYVMCAQFHPSE--DLVVSASLDQTVRVWDISGLRKKNLSPGAVESDVRGIT- 185
Query: 278 MWNADSACLYEQKSSDVTISFEMDDSKRGFTAATVLPSNQGLLCVTADQQLLLYTTVEVP 337
D L+ ++D + ++ RG A P+ ++ D+Q+ ++ E
Sbjct: 186 --GVD---LFG--TTDAVVKHVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNE-- 236
Query: 338 EKKMELILSKRLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLS 384
K E+ + G+ + F +E L+ + + + ++V+D+S
Sbjct: 237 SKAWEVDTCR---GHYNNVSCAVFHPRQELILSNSED-KSIRVWDMS 279
Score = 99 (39.9 bits), Expect = 1.0e-11, Sum P(2) = 1.0e-11
Identities = 23/79 (29%), Positives = 37/79 (46%)
Query: 55 TIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPSG 114
T+ G D I + + S+ + IRVW+ + C+ GH+ + HPS
Sbjct: 88 TLLGHLDYIRTTFFHHEYPWILSASDDQTIRVWNWQSRTCVCVLTGHNHYVMCAQFHPSE 147
Query: 115 GLLATAGADRKVLVWDVDG 133
L+ +A D+ V VWD+ G
Sbjct: 148 DLVVSASLDQTVRVWDISG 166
Score = 38 (18.4 bits), Expect = 1.9e-10, Sum P(2) = 1.9e-10
Identities = 10/35 (28%), Positives = 19/35 (54%)
Query: 353 NEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMS 387
N E+ L L E ++ + TN ++V++ D+ S
Sbjct: 756 NSELTCLS-LALEGEFCEMTTNEKEVKLADMRGFS 789
>RGD|620575 [details] [associations]
symbol:Apaf1 "apoptotic peptidase activating factor 1"
species:10116 "Rattus norvegicus" [GO:0001666 "response to hypoxia"
evidence=IEP] [GO:0001843 "neural tube closure" evidence=ISO]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005794
"Golgi apparatus" evidence=ISO] [GO:0005829 "cytosol" evidence=ISO]
[GO:0006309 "apoptotic DNA fragmentation" evidence=ISO] [GO:0006917
"induction of apoptosis" evidence=IDA] [GO:0006919 "activation of
cysteine-type endopeptidase activity involved in apoptotic process"
evidence=ISO] [GO:0006952 "defense response" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=ISO]
[GO:0007420 "brain development" evidence=ISO;IEP] [GO:0007568
"aging" evidence=IEP] [GO:0007584 "response to nutrient"
evidence=IEP] [GO:0008635 "activation of cysteine-type
endopeptidase activity involved in apoptotic process by cytochrome
c" evidence=ISO] [GO:0010659 "cardiac muscle cell apoptotic
process" evidence=IMP] [GO:0010952 "positive regulation of
peptidase activity" evidence=ISO] [GO:0016505 "apoptotic protease
activator activity" evidence=ISO] [GO:0030154 "cell
differentiation" evidence=IEP] [GO:0030900 "forebrain development"
evidence=ISO] [GO:0031072 "heat shock protein binding"
evidence=IPI] [GO:0034349 "glial cell apoptotic process"
evidence=IEP] [GO:0042802 "identical protein binding"
evidence=ISO;IDA] [GO:0043293 "apoptosome" evidence=ISO;IDA]
[GO:0043531 "ADP binding" evidence=IEA] [GO:0051260 "protein
homooligomerization" evidence=IDA] [GO:0051402 "neuron apoptotic
process" evidence=ISO] [GO:0071560 "cellular response to
transforming growth factor beta stimulus" evidence=IDA] [GO:0005730
"nucleolus" evidence=ISO] InterPro:IPR017986 InterPro:IPR000767
InterPro:IPR001315 InterPro:IPR001680 InterPro:IPR002182
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00619 Pfam:PF00931
PRINTS:PR00364 PROSITE:PS50082 PROSITE:PS50209 PROSITE:PS50294
SMART:SM00320 RGD:620575 GO:GO:0005524 GO:GO:0007420 GO:GO:0030154
GO:GO:0006952 GO:GO:0006917 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0071560 GO:GO:0007568
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051260
GO:GO:0001666 GO:GO:0007584 GO:GO:0043531 GO:GO:0042802
Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986 GO:GO:0043293
CTD:317 HOVERGEN:HBG018730 KO:K02084 InterPro:IPR017251
PIRSF:PIRSF037646 EMBL:AF320222 IPI:IPI00324110 RefSeq:NP_076469.1
UniGene:Rn.64522 ProteinModelPortal:Q9EPV5 SMR:Q9EPV5
MINT:MINT-3370020 STRING:Q9EPV5 PRIDE:Q9EPV5 GeneID:78963
KEGG:rno:78963 UCSC:RGD:620575 InParanoid:Q9EPV5 NextBio:614396
Genevestigator:Q9EPV5 GermOnline:ENSRNOG00000008022 GO:GO:0010659
GO:GO:0034349 Uniprot:Q9EPV5
Length = 1249
Score = 267 (99.0 bits), Expect = 3.3e-19, P = 3.3e-19
Identities = 147/625 (23%), Positives = 261/625 (41%)
Query: 28 SSDGSFIA-CACGESINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRV 86
S DG IA C +++ + I+ D + A S DD + + +++++
Sbjct: 624 SQDGQRIASCGADKTLQVFKAETGEKLLDIKAHEDEVLCCAFSSDDSYIATCSVDKKVKI 683
Query: 87 WDLSTLKCLRSWKGHDGPAIGMACHPSGG----LLATAGADRKVLVWDVDGGFCTHYFKG 142
WD T K + +++ H CH + LLAT D + +WD++ C + G
Sbjct: 684 WDSGTGKLVHTYEEHSEQV--NCCHFTNKSNHLLLATGSNDSFLKLWDLNQKECRNTMFG 741
Query: 143 HKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLA---KKCVATLDKHFSR--------- 190
H V+ F PD + LL S S D T+++WD+ + KK + S
Sbjct: 742 HTNSVTHCRFSPDDE--LLASCSADGTLKLWDVRSANEKKSINVKRFFLSSEDPPEDVEV 799
Query: 191 -VTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPT-YEMVEAVCAIPPGSAFDSF- 247
V + ++DG +I A ++KV+ L D+ + T + C P
Sbjct: 800 IVKCCSWSADGDRIIVAAKNKVL-LLDIHTSGLLTEIHTGHHSTIQYCDFSPYDHLAVIA 858
Query: 248 LSSYNQQ--TIKKKRRSLEIHFITVGERGIVRMWNADSACLYEQKSSDVTISFEMDDSKR 305
LS Y + I + + + G+ M++ D + + S D TI + K
Sbjct: 859 LSQYCVELWNIDSRVKVADCRGHLSWVHGV--MFSPDGSS-FLTASDDQTIRV-WETRKV 914
Query: 306 GFTAATVLPSNQGLLCVTADQQLLLYTTVEVPEKKMELILSKR-LVGYNEEI-LDLKFLG 363
+A VL Q + V + ++++ + + ++LI K + Y E + L
Sbjct: 915 CKNSAIVL--KQEIDVVFQENEMMVLAVDNI--RGLQLIAGKTGQIDYLPEAQVSCCCLS 970
Query: 364 EEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSV 423
+Y+A +++ +L + GH + V + A GK LI + S+D+ +
Sbjct: 971 PHLEYVAFGDEEGAIKIIELPNNRVFSSGIGHKKAVRHIQFTA--DGKTLI-SSSEDSVI 1027
Query: 424 RLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMN 483
++W+ ++ V + H V F + L+S S D T+KVW+ ++ E+
Sbjct: 1028 QVWNWQTEEYVFL-QAHQETVKD--FRLLRDSRLLSWSFDGTVKVWNV--ITGRIERDFT 1082
Query: 484 LKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVV-TFRGHKRGIWSV 542
H + S A++ + + + S D+TA +W +L S + +GH +
Sbjct: 1083 --------CHQGTVLSCAISSDATKFSSTSADKTAKIWSF-ELPSPLHELKGHNSCVRCS 1133
Query: 543 EFSPVDQVVITASGDKT--IKIWSISDGS----C--LKTFEG---HTSSVLRASFLTRGA 591
FS +D +++ A+GD I+IW++SDG C + EG H V F
Sbjct: 1134 AFS-LDGILL-ATGDDNGEIRIWNVSDGQLLHLCAPISIEEGTATHGGWVTDVCFSPDRK 1191
Query: 592 QIVSCGADGLVKLWTVRTGECIATY 616
+VS G G +K W V TGE T+
Sbjct: 1192 MLVSAG--GYLKWWNVVTGESSQTF 1214
Score = 209 (78.6 bits), Expect = 3.6e-22, Sum P(2) = 3.6e-22
Identities = 56/215 (26%), Positives = 95/215 (44%)
Query: 12 CEPVLQQFYGGGPLVVSSDGSFIACACGESINIVDLSNASIKSTIEGGSDTITALALSPD 71
CEP + Y L + E IN + N S + + +D + S D
Sbjct: 569 CEPETSEVYQQAKLQAKQEVDTGRLYL-EWINKKTIKNLS-RLVVRPHTDAVYHACFSQD 626
Query: 72 DKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDV 131
+ + S G + ++V+ T + L K H+ + A +AT D+KV +WD
Sbjct: 627 GQRIASCGADKTLQVFKAETGEKLLDIKAHEDEVLCCAFSSDDSYIATCSVDKKVKIWDS 686
Query: 132 DGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRV 191
G H ++ H V+ F ++ LL +GS+D+ +++WDL K+C T+ H + V
Sbjct: 687 GTGKLVHTYEEHSEQVNCCHFTNKSNHLLLATGSNDSFLKLWDLNQKECRNTMFGHTNSV 746
Query: 192 TSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTV 226
T + D L S D + LWD+R + K ++
Sbjct: 747 THCRFSPDDELLASCSADGTLKLWDVRSANEKKSI 781
Score = 175 (66.7 bits), Expect = 2.9e-09, P = 2.9e-09
Identities = 48/172 (27%), Positives = 81/172 (47%)
Query: 440 HMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINS 499
H AV FS+ Q + S +D T++V+ ++ E+ +++KA H ++
Sbjct: 614 HTDAVYHACFSQDGQR-IASCGADKTLQVFK----AETGEKLLDIKA------HEDEVLC 662
Query: 500 LAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASG--D 557
A + +DS + T S D+ +W V T+ H + F+ ++ A+G D
Sbjct: 663 CAFSSDDSYIATCSVDKKVKIWDSGTGKLVHTYEEHSEQVNCCHFTNKSNHLLLATGSND 722
Query: 558 KTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRT 609
+K+W ++ C T GHT+SV F + SC ADG +KLW VR+
Sbjct: 723 SFLKLWDLNQKECRNTMFGHTNSVTHCRFSPDDELLASCSADGTLKLWDVRS 774
Score = 161 (61.7 bits), Expect = 9.4e-08, P = 9.4e-08
Identities = 33/123 (26%), Positives = 61/123 (49%)
Query: 527 VSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASF 586
+S + R H ++ FS Q + + DKT++++ G L + H VL +F
Sbjct: 606 LSRLVVRPHTDAVYHACFSQDGQRIASCGADKTLQVFKAETGEKLLDIKAHEDEVLCCAF 665
Query: 587 LTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTE--MFATGGSDALV 644
+ + I +C D VK+W TG+ + TY++H +++ K+ + ATG +D+ +
Sbjct: 666 SSDDSYIATCSVDKKVKIWDSGTGKLVHTYEEHSEQVNCCHFTNKSNHLLLATGSNDSFL 725
Query: 645 NLW 647
LW
Sbjct: 726 KLW 728
Score = 140 (54.3 bits), Expect = 3.6e-22, Sum P(2) = 3.6e-22
Identities = 32/151 (21%), Positives = 72/151 (47%)
Query: 497 INSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASG 556
++ ++P+ V G ++ + LP+ + GHK+ + ++F+ + +I++S
Sbjct: 964 VSCCCLSPHLEYVAFGDEEGAIKIIELPNNRVFSSGIGHKKAVRHIQFTADGKTLISSSE 1023
Query: 557 DKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATY 616
D I++W+ + + H +V + L R ++++S DG VK+W V TG +
Sbjct: 1024 DSVIQVWNWQTEEYV-FLQAHQETV-KDFRLLRDSRLLSWSFDGTVKVWNVITGRIERDF 1081
Query: 617 DKHEDKIWALAVGKKTEMFATGGSDALVNLW 647
H+ + + A+ F++ +D +W
Sbjct: 1082 TCHQGTVLSCAISSDATKFSSTSADKTAKIW 1112
Score = 113 (44.8 bits), Expect = 2.4e-19, Sum P(2) = 2.4e-19
Identities = 31/158 (19%), Positives = 61/158 (38%)
Query: 493 HGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVI 552
H K + + + + + S+D VW V + H+ + D ++
Sbjct: 1002 HKKAVRHIQFTADGKTLISSSEDSVIQVWNW-QTEEYVFLQAHQETVKDFRLLR-DSRLL 1059
Query: 553 TASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGEC 612
+ S D T+K+W++ G + F H +VL + + + S AD K+W+
Sbjct: 1060 SWSFDGTVKVWNVITGRIERDFTCHQGTVLSCAISSDATKFSSTSADKTAKIWSFELPSP 1119
Query: 613 IATYDKHEDKIWALAVGKKTEMFATGGSDALVNLWHDS 650
+ H + A + ATG + + +W+ S
Sbjct: 1120 LHELKGHNSCVRCSAFSLDGILLATGDDNGEIRIWNVS 1157
Score = 92 (37.4 bits), Expect = 3.6e-17, Sum P(2) = 3.6e-17
Identities = 43/183 (23%), Positives = 79/183 (43%)
Query: 463 DHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWR 522
D + WSFDG + + + + H + S A++ + + + S D+TA +W
Sbjct: 1055 DSRLLSWSFDG-TVKVWNVITGRIERDFTCHQGTVLSCAISSDATKFSSTSADKTAKIWS 1113
Query: 523 LPDLVSVV-TFRGHKRGIWSVEFSPVDQVVITASGDKT--IKIWSISDGSCLKTFEGHTS 579
+L S + +GH + FS +D +++ A+GD I+IW++SDG L +
Sbjct: 1114 F-ELPSPLHELKGHNSCVRCSAFS-LDGILL-ATGDDNGEIRIWNVSDGQLLHLCAPIS- 1169
Query: 580 SVLRASFLTRGAQIVS-CGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATG 638
+ T G + C + L V G + K W + G+ ++ F T
Sbjct: 1170 --IEEGTATHGGWVTDVCFSPDRKML--VSAGGYL--------KWWNVVTGESSQTFYTN 1217
Query: 639 GSD 641
G++
Sbjct: 1218 GTN 1220
Score = 87 (35.7 bits), Expect = 1.2e-16, Sum P(2) = 1.2e-16
Identities = 46/208 (22%), Positives = 87/208 (41%)
Query: 349 LVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALS 408
L + E + D + L + + L+ + + V+V+++ + H VL +CA+S
Sbjct: 1040 LQAHQETVKDFRLL-RDSRLLSWSFD-GTVKVWNVITGRIERDFTCHQGTVL---SCAIS 1094
Query: 409 SGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDH-TIK 467
S + S D + ++W E + GH V AFS L L++ D+ I+
Sbjct: 1095 SDATKFSSTSADKTAKIWSFELPSPLHELKGHNSCVRCSAFS--LDGILLATGDDNGEIR 1152
Query: 468 VWSF-DGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDS-LVCTGSQDRTACVWRLPD 525
+W+ DG P++++ A HG + + +P+ LV G + W +
Sbjct: 1153 IWNVSDGQLLHLCAPISIEEGT--ATHGGWVTDVCFSPDRKMLVSAGGYLKW---WNVVT 1207
Query: 526 LVSVVTFRGHKRGIWSVEFSPVDQVVIT 553
S TF + + + SP + +T
Sbjct: 1208 GESSQTFYTNGTNLKKIHVSPDFRTYVT 1235
Score = 53 (23.7 bits), Expect = 9.4e-06, Sum P(2) = 9.4e-06
Identities = 20/88 (22%), Positives = 38/88 (43%)
Query: 169 TVRVW-DLLAKKCVATLDK-----HFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSC 222
T R++ + + KK + L + H V + DG + S G DK + ++
Sbjct: 590 TGRLYLEWINKKTIKNLSRLVVRPHTDAVYHACFSQDGQRIASCGADKTLQVFKAETGEK 649
Query: 223 KLTVPTYEMVEAVCAIPPGSAFDSFLSS 250
L + +E CA S+ DS++++
Sbjct: 650 LLDIKAHEDEVLCCAF---SSDDSYIAT 674
>RGD|1565004 [details] [associations]
symbol:Poc1a "POC1 centriolar protein homolog A (Chlamydomonas)"
species:10116 "Rattus norvegicus" [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=ISO] [GO:0005932 "microtubule basal body"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1565004 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 OrthoDB:EOG412M5H IPI:IPI00763099
ProteinModelPortal:D4ABU4 Ensembl:ENSRNOT00000038166
UCSC:RGD:1565004 ArrayExpress:D4ABU4 Uniprot:D4ABU4
Length = 324
Score = 267 (99.0 bits), Expect = 3.7e-22, P = 3.7e-22
Identities = 70/254 (27%), Positives = 118/254 (46%)
Query: 394 GHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKL 453
GH + V C+D +L++ + +GS D+++ +W + + TGH AV V FS
Sbjct: 17 GHRDAVTCVDF-SLNTKHL--ASGSMDSTLMIWHMKPQSRAYRFTGHKDAVTCVNFSPS- 72
Query: 454 QNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVV-AAHGKDINSLAVAPNDSLVCTG 512
+ L SGS D T+++W P N+K ++ V AH + S+ + L+ T
Sbjct: 73 GHLLASGSRDKTVRIWV----------P-NVKGESTVFRAHTATVRSVHFCSDGQLLVTA 121
Query: 513 SQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLK 572
S D+T VW + + H + +FSP +++++AS DKT+K+W + C+
Sbjct: 122 SDDKTVKVWSTHRQRFLFSLTQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVH 181
Query: 573 TFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKT 632
++ H V F G I + G D VK+W RT + Y H + AL+
Sbjct: 182 SYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDTRTHRLVQHYQLHSAAVNALSFHPSG 241
Query: 633 EMFATGGSDALVNL 646
T SD+ + +
Sbjct: 242 NYLITASSDSTLKI 255
Score = 238 (88.8 bits), Expect = 4.9e-19, P = 4.9e-19
Identities = 65/214 (30%), Positives = 99/214 (46%)
Query: 439 GHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDIN 498
GH AV V FS ++ L SGS D T+ +W +P + + H +
Sbjct: 17 GHRDAVTCVDFSLNTKH-LASGSMDSTLMIWHM--------KPQSRAYR--FTGHKDAVT 65
Query: 499 SLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVT-FRGHKRGIWSVEFSPVDQVVITASGD 557
+ +P+ L+ +GS+D+T +W +P++ T FR H + SV F Q+++TAS D
Sbjct: 66 CVNFSPSGHLLASGSRDKTVRIW-VPNVKGESTVFRAHTATVRSVHFCSDGQLLVTASDD 124
Query: 558 KTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYD 617
KT+K+WS L + H + V A F G IVS D VKLW + EC+ +Y
Sbjct: 125 KTVKVWSTHRQRFLFSLTQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYC 184
Query: 618 KHEDKIWALAVGKKTEMFATGGSDALVNLWHDST 651
+H + + A G D V +W T
Sbjct: 185 EHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDTRT 218
Score = 229 (85.7 bits), Expect = 5.9e-17, P = 5.9e-17
Identities = 49/188 (26%), Positives = 92/188 (48%)
Query: 29 SDGSFIACACGE-SINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRVW 87
SDG + A + ++ + ++ + + SPD +L+ S+ + +++W
Sbjct: 113 SDGQLLVTASDDKTVKVWSTHRQRFLFSLTQHINWVRCAKFSPDGRLIVSASDDKTVKLW 172
Query: 88 DLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVV 147
D ++ +C+ S+ H G + HPSG +A AG D V VWD +++ H V
Sbjct: 173 DKTSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDTRTHRLVQHYQLHSAAV 232
Query: 148 SSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAG 207
+++ FHP + L + S D+T+++ DL+ + + TL H T++A + G S G
Sbjct: 233 NALSFHPSGN--YLITASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGG 290
Query: 208 RDKVVNLW 215
D+ V +W
Sbjct: 291 SDEQVMVW 298
Score = 205 (77.2 bits), Expect = 1.4e-15, Sum P(2) = 1.4e-15
Identities = 51/174 (29%), Positives = 81/174 (46%)
Query: 51 SIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMAC 110
S++ +G D +T + S + K L S + +W + + GH +
Sbjct: 10 SLERHFKGHRDAVTCVDFSLNTKHLASGSMDSTLMIWHMKPQSRAYRFTGHKDAVTCVNF 69
Query: 111 HPSGGLLATAGADRKVLVW--DVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDA 168
PSG LLA+ D+ V +W +V G + F+ H V S+ H +D LL + SDD
Sbjct: 70 SPSGHLLASGSRDKTVRIWVPNVKGE--STVFRAHTATVRSV--HFCSDGQLLVTASDDK 125
Query: 169 TVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSC 222
TV+VW ++ + +L +H + V + DG ++SA DK V LWD C
Sbjct: 126 TVKVWSTHRQRFLFSLTQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSREC 179
Score = 205 (77.2 bits), Expect = 8.0e-14, P = 8.0e-14
Identities = 65/258 (25%), Positives = 107/258 (41%)
Query: 348 RLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCAL 407
R G+ + + + F LA + + V+++ + S V H+ V + C
Sbjct: 56 RFTGHKDAVTCVNF-SPSGHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFC-- 112
Query: 408 SSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIK 467
S G++L VT S D +V++W + + + T H+ V FS +VS S D T+K
Sbjct: 113 SDGQLL-VTASDDKTVKVWSTHRQRFLFSLTQHINWVRCAKFSPD-GRLIVSASDDKTVK 170
Query: 468 VWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLV 527
+W D S + HG + + P+ + + D T VW
Sbjct: 171 LW--DKTSRECVHSY--------CEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDTRTHR 220
Query: 528 SVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFL 587
V ++ H + ++ F P +ITAS D T+KI + +G L T GH +F
Sbjct: 221 LVQHYQLHSAAVNALSFHPSGNYLITASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFS 280
Query: 588 TRGAQIVSCGADGLVKLW 605
G S G+D V +W
Sbjct: 281 RTGEYFASGGSDEQVMVW 298
Score = 190 (71.9 bits), Expect = 1.1e-13, Sum P(2) = 1.1e-13
Identities = 55/201 (27%), Positives = 90/201 (44%)
Query: 58 GGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPSGGLL 117
G D +T + SP LL S + +R+W + ++ H + G LL
Sbjct: 59 GHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQLL 118
Query: 118 ATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLA 177
TA D+ V VW H V F PD L+ S SDD TV++WD +
Sbjct: 119 VTASDDKTVKVWSTHRQRFLFSLTQHINWVRCAKFSPDG--RLIVSASDDKTVKLWDKTS 176
Query: 178 KKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYEMVEA-VC 236
++CV + +H VT + G+ + +AG D V +WD R + +L V Y++ A V
Sbjct: 177 RECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDTRTH--RL-VQHYQLHSAAVN 233
Query: 237 AIPPGSAFDSFLSSYNQQTIK 257
A+ + + +++ + T+K
Sbjct: 234 ALSFHPSGNYLITASSDSTLK 254
Score = 183 (69.5 bits), Expect = 7.8e-13, Sum P(2) = 7.8e-13
Identities = 48/193 (24%), Positives = 87/193 (45%)
Query: 28 SSDGSFIACACGESINIVDLSNASIKSTI-EGGSDTITALALSPDDKLLFSSGHSREIRV 86
S G +A + + + N +ST+ + T+ ++ D +LL ++ + ++V
Sbjct: 70 SPSGHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQLLVTASDDKTVKV 129
Query: 87 WDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGV 146
W + L S H P G L+ +A D+ V +WD C H + H G
Sbjct: 130 WSTHRQRFLFSLTQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGF 189
Query: 147 VSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISA 206
V+ + FHP + + +G D+ TV+VWD + V H + V +++ G+ LI+A
Sbjct: 190 VTYVDFHP-SGTCIAAAGMDN-TVKVWDTRTHRLVQHYQLHSAAVNALSFHPSGNYLITA 247
Query: 207 GRDKVVNLWDLRD 219
D + + DL +
Sbjct: 248 SSDSTLKILDLME 260
Score = 56 (24.8 bits), Expect = 1.4e-15, Sum P(2) = 1.4e-15
Identities = 17/61 (27%), Positives = 24/61 (39%)
Query: 368 YLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWD 427
YL A++ +++ DL Y L GH T A S +G D V +W
Sbjct: 243 YLITASSDSTLKILDLMEGRLLYTLHGHQGPAT---TVAFSRTGEYFASGGSDEQVMVWK 299
Query: 428 S 428
S
Sbjct: 300 S 300
>UNIPROTKB|Q27954 [details] [associations]
symbol:COPA "Coatomer subunit alpha" species:9913 "Bos
taurus" [GO:0005515 "protein binding" evidence=IPI] [GO:0006890
"retrograde vesicle-mediated transport, Golgi to ER" evidence=TAS]
[GO:0030126 "COPI vesicle coat" evidence=IDA] [GO:0006891
"intra-Golgi vesicle-mediated transport" evidence=TAS] [GO:0030157
"pancreatic juice secretion" evidence=IEA] [GO:0005615
"extracellular space" evidence=IEA] [GO:0005179 "hormone activity"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0005198 "structural molecule activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR010714 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 Pfam:PF06957 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006886 GO:GO:0005615
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005198 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0030157 GO:GO:0006891 GO:GO:0030126
GO:GO:0006890 HOGENOM:HOG000195913 KO:K05236 InterPro:IPR016391
PIRSF:PIRSF003354 EMBL:X96768 EMBL:BC153251 IPI:IPI00904110
RefSeq:NP_001099115.1 UniGene:Bt.76408 PDB:3MKR PDBsum:3MKR
ProteinModelPortal:Q27954 IntAct:Q27954 STRING:Q27954 PRIDE:Q27954
Ensembl:ENSBTAT00000005672 GeneID:100126041 KEGG:bta:100126041
CTD:1314 GeneTree:ENSGT00600000084501 HOVERGEN:HBG005379
EvolutionaryTrace:Q27954 NextBio:20788926 Uniprot:Q27954
Length = 1224
Score = 218 (81.8 bits), Expect = 6.4e-14, P = 6.4e-14
Identities = 60/218 (27%), Positives = 104/218 (47%)
Query: 377 QVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGV 436
+++V++ C + L GH + + T I++ S D ++R+W+ +SR CV V
Sbjct: 74 KIKVWNYKLRRCLFTLLGHLDYIR---TTFFHHEYPWILSASDDQTIRVWNWQSRTCVCV 130
Query: 437 GTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGL-----------SD-------DA 478
TGH V F ++ +VS S D T++VW GL SD D
Sbjct: 131 LTGHNHYVMCAQFHPS-EDLVVSASLDQTVRVWDISGLRKKNLSPGAVESDVRGITGVDL 189
Query: 479 EQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVS--VVTFRGHK 536
+ K V+ H + +N A P L+ +G+ DR +WR+ + + V T RGH
Sbjct: 190 FGTTDAVVKHVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNESKAWEVDTCRGHY 249
Query: 537 RGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTF 574
+ F P +++++ S DK+I++W +S + ++TF
Sbjct: 250 NNVSCAVFHPRQELILSNSEDKSIRVWDMSKRTGVQTF 287
Score = 198 (74.8 bits), Expect = 3.8e-22, Sum P(2) = 3.8e-22
Identities = 45/161 (27%), Positives = 71/161 (44%)
Query: 57 EGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPSGGL 116
E S + L+ P + +S H+ I++WD + + HDGP G+ H L
Sbjct: 6 ETKSARVKGLSFHPKRPWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFHKQQPL 65
Query: 117 LATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLL 176
+ G D K+ VW+ C GH + + FH + + S SDD T+RVW+
Sbjct: 66 FVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYP--WILSASDDQTIRVWNWQ 123
Query: 177 AKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDL 217
++ CV L H V ++SA D+ V +WD+
Sbjct: 124 SRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDI 164
Score = 151 (58.2 bits), Expect = 3.8e-22, Sum P(2) = 3.8e-22
Identities = 35/125 (28%), Positives = 62/125 (49%)
Query: 525 DLVSVVTFRGHKRGI-WSVEFSPVDQVVITASGDKTIKIWSISDGSC--LKTFEGHTSSV 581
D V GH RG+ W+ F P ++++ + D+ +KIW +++ + T GH ++V
Sbjct: 194 DAVVKHVLEGHDRGVNWAA-FHPTMPLIVSGADDRQVKIWRMNESKAWEVDTCRGHYNNV 252
Query: 582 LRASFLTRGAQIVSCGADGLVKLWTV--RTGECIATYDKHEDKIWALAVGKKTEMFATGG 639
A F R I+S D +++W + RTG + T+ + D+ W LA +FA G
Sbjct: 253 SCAVFHPRQELILSNSEDKSIRVWDMSKRTG--VQTFRRDHDRFWVLAAHPNLNLFAAGH 310
Query: 640 SDALV 644
++
Sbjct: 311 DGGMI 315
Score = 147 (56.8 bits), Expect = 3.0e-06, P = 3.0e-06
Identities = 58/235 (24%), Positives = 95/235 (40%)
Query: 414 IVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDG 473
I+T + ++LWD + H G V + F K+ Q VSG D+ IKVW++
Sbjct: 24 ILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFHKQ-QPLFVSGGDDYKIKVWNYK- 81
Query: 474 LSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFR 533
L + + H I + + + S D+T VW V
Sbjct: 82 LR---------RCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVWNWQSRTCVCVLT 132
Query: 534 GHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFE-GHTSSVLRASFLTRGAQ 592
GH + +F P + +V++AS D+T+++W IS G K G S +R +T G
Sbjct: 133 GHNHYVMCAQFHPSEDLVVSASLDQTVRVWDIS-GLRKKNLSPGAVESDVRG--IT-GVD 188
Query: 593 IVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLW 647
+ D +VK + +D+ + WA A + +G D V +W
Sbjct: 189 LFGT-TDAVVK-------HVLEGHDRGVN--WA-AFHPTMPLIVSGADDRQVKIW 232
Score = 139 (54.0 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 63/287 (21%), Positives = 125/287 (43%)
Query: 107 GMACHPSGGLLATAGADRKVLVWDVDGGFCT--HYFKGHKGVVSSILFHPDTDKSLLFSG 164
G++ HP + T+ + + +WD CT F H G V I FH + L SG
Sbjct: 14 GLSFHPKRPWILTSLHNGVIQLWDYR--MCTLIDKFDEHDGPVRGIDFHKQ--QPLFVSG 69
Query: 165 SDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKL 224
DD ++VW+ ++C+ TL H + + + ++SA D+ + +W+ + +C +
Sbjct: 70 GDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVWNWQSRTC-V 128
Query: 225 TVPTYEMVEAVCA-IPPGSAFDSFLSSYNQQTIKK------KRRSLEIHFITVGERGIVR 277
V T +CA P D +S+ QT++ ++++L + RGI
Sbjct: 129 CVLTGHNHYVMCAQFHPSE--DLVVSASLDQTVRVWDISGLRKKNLSPGAVESDVRGIT- 185
Query: 278 MWNADSACLYEQKSSDVTISFEMDDSKRGFTAATVLPSNQGLLCVTADQQLLLYTTVEVP 337
D L+ ++D + ++ RG A P+ ++ D+Q+ ++ E
Sbjct: 186 --GVD---LFG--TTDAVVKHVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNE-- 236
Query: 338 EKKMELILSKRLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLS 384
K E+ + G+ + F +E L+ + + + ++V+D+S
Sbjct: 237 SKAWEVDTCR---GHYNNVSCAVFHPRQELILSNSED-KSIRVWDMS 279
Score = 131 (51.2 bits), Expect = 0.00016, P = 0.00016
Identities = 34/113 (30%), Positives = 54/113 (47%)
Query: 99 KGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHY--FKGHKGVVSSILFHPDT 156
+GHD A HP+ L+ + DR+V +W ++ +GH VS +FHP
Sbjct: 202 EGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNESKAWEVDTCRGHYNNVSCAVFHPRQ 261
Query: 157 DKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRD 209
+ L+ S S+D ++RVWD+ + V T + R +A L +AG D
Sbjct: 262 E--LILSNSEDKSIRVWDMSKRTGVQTFRRDHDRFWVLA-AHPNLNLFAAGHD 311
Score = 126 (49.4 bits), Expect = 0.00054, P = 0.00054
Identities = 41/180 (22%), Positives = 76/180 (42%)
Query: 40 ESINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWK 99
++I + + + + + G + + P + L+ S+ + +RVWD+S L+ K
Sbjct: 115 QTIRVWNWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDISGLR-----K 169
Query: 100 GHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKS 159
+ P G G+ G D ++ H +GH V+ FHP
Sbjct: 170 KNLSP--GAVESDVRGI---TGVD----LFGTTDAVVKHVLEGHDRGVNWAAFHPTMP-- 218
Query: 160 LLFSGSDDATVRVWDLLAKKC--VATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDL 217
L+ SG+DD V++W + K V T H++ V+ ++S DK + +WD+
Sbjct: 219 LIVSGADDRQVKIWRMNESKAWEVDTCRGHYNNVSCAVFHPRQELILSNSEDKSIRVWDM 278
Score = 99 (39.9 bits), Expect = 1.1e-11, Sum P(2) = 1.1e-11
Identities = 23/79 (29%), Positives = 37/79 (46%)
Query: 55 TIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPSG 114
T+ G D I + + S+ + IRVW+ + C+ GH+ + HPS
Sbjct: 88 TLLGHLDYIRTTFFHHEYPWILSASDDQTIRVWNWQSRTCVCVLTGHNHYVMCAQFHPSE 147
Query: 115 GLLATAGADRKVLVWDVDG 133
L+ +A D+ V VWD+ G
Sbjct: 148 DLVVSASLDQTVRVWDISG 166
>UNIPROTKB|F1RJX8 [details] [associations]
symbol:COPA "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0030157 "pancreatic juice secretion" evidence=IEA]
[GO:0005615 "extracellular space" evidence=IEA] [GO:0030126 "COPI
vesicle coat" evidence=IEA] [GO:0016192 "vesicle-mediated
transport" evidence=IEA] [GO:0006886 "intracellular protein
transport" evidence=IEA] [GO:0005198 "structural molecule activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR010714 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 Pfam:PF06957 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006886 GO:GO:0005615
GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005198 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030157 GO:GO:0030126 KO:K05236 InterPro:IPR016391
PIRSF:PIRSF003354 CTD:1314 GeneTree:ENSGT00600000084501 OMA:FWVLGAH
EMBL:CU207285 RefSeq:XP_001928742.1 UniGene:Ssc.96897
Ensembl:ENSSSCT00000006999 GeneID:100157296 KEGG:ssc:100157296
Uniprot:F1RJX8
Length = 1224
Score = 218 (81.8 bits), Expect = 6.4e-14, P = 6.4e-14
Identities = 60/218 (27%), Positives = 104/218 (47%)
Query: 377 QVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGV 436
+++V++ C + L GH + + T I++ S D ++R+W+ +SR CV V
Sbjct: 74 KIKVWNYKLRRCLFTLLGHLDYIR---TTFFHHEYPWILSASDDQTIRVWNWQSRTCVCV 130
Query: 437 GTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGL-----------SD-------DA 478
TGH V F ++ +VS S D T++VW GL SD D
Sbjct: 131 LTGHNHYVMCAQFHPS-EDLVVSASLDQTVRVWDISGLRKKNLSPGAVESDVRGITGVDL 189
Query: 479 EQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVS--VVTFRGHK 536
+ K V+ H + +N A P L+ +G+ DR +WR+ + + V T RGH
Sbjct: 190 FGTTDAVVKHVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNESKAWEVDTCRGHY 249
Query: 537 RGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTF 574
+ F P +++++ S DK+I++W +S + ++TF
Sbjct: 250 NNVSCAVFHPRQELILSNSEDKSIRVWDMSKRTGVQTF 287
Score = 198 (74.8 bits), Expect = 3.8e-22, Sum P(2) = 3.8e-22
Identities = 45/161 (27%), Positives = 71/161 (44%)
Query: 57 EGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPSGGL 116
E S + L+ P + +S H+ I++WD + + HDGP G+ H L
Sbjct: 6 ETKSARVKGLSFHPKRPWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFHKQQPL 65
Query: 117 LATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLL 176
+ G D K+ VW+ C GH + + FH + + S SDD T+RVW+
Sbjct: 66 FVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYP--WILSASDDQTIRVWNWQ 123
Query: 177 AKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDL 217
++ CV L H V ++SA D+ V +WD+
Sbjct: 124 SRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDI 164
Score = 151 (58.2 bits), Expect = 3.8e-22, Sum P(2) = 3.8e-22
Identities = 35/125 (28%), Positives = 62/125 (49%)
Query: 525 DLVSVVTFRGHKRGI-WSVEFSPVDQVVITASGDKTIKIWSISDGSC--LKTFEGHTSSV 581
D V GH RG+ W+ F P ++++ + D+ +KIW +++ + T GH ++V
Sbjct: 194 DAVVKHVLEGHDRGVNWAA-FHPTMPLIVSGADDRQVKIWRMNESKAWEVDTCRGHYNNV 252
Query: 582 LRASFLTRGAQIVSCGADGLVKLWTV--RTGECIATYDKHEDKIWALAVGKKTEMFATGG 639
A F R I+S D +++W + RTG + T+ + D+ W LA +FA G
Sbjct: 253 SCAVFHPRQELILSNSEDKSIRVWDMSKRTG--VQTFRRDHDRFWVLAAHPNLNLFAAGH 310
Query: 640 SDALV 644
++
Sbjct: 311 DGGMI 315
Score = 147 (56.8 bits), Expect = 3.0e-06, P = 3.0e-06
Identities = 58/235 (24%), Positives = 95/235 (40%)
Query: 414 IVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDG 473
I+T + ++LWD + H G V + F K+ Q VSG D+ IKVW++
Sbjct: 24 ILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFHKQ-QPLFVSGGDDYKIKVWNYK- 81
Query: 474 LSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFR 533
L + + H I + + + S D+T VW V
Sbjct: 82 LR---------RCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVWNWQSRTCVCVLT 132
Query: 534 GHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFE-GHTSSVLRASFLTRGAQ 592
GH + +F P + +V++AS D+T+++W IS G K G S +R +T G
Sbjct: 133 GHNHYVMCAQFHPSEDLVVSASLDQTVRVWDIS-GLRKKNLSPGAVESDVRG--IT-GVD 188
Query: 593 IVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLW 647
+ D +VK + +D+ + WA A + +G D V +W
Sbjct: 189 LFGT-TDAVVK-------HVLEGHDRGVN--WA-AFHPTMPLIVSGADDRQVKIW 232
Score = 139 (54.0 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 63/287 (21%), Positives = 125/287 (43%)
Query: 107 GMACHPSGGLLATAGADRKVLVWDVDGGFCT--HYFKGHKGVVSSILFHPDTDKSLLFSG 164
G++ HP + T+ + + +WD CT F H G V I FH + L SG
Sbjct: 14 GLSFHPKRPWILTSLHNGVIQLWDYR--MCTLIDKFDEHDGPVRGIDFHKQ--QPLFVSG 69
Query: 165 SDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKL 224
DD ++VW+ ++C+ TL H + + + ++SA D+ + +W+ + +C +
Sbjct: 70 GDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVWNWQSRTC-V 128
Query: 225 TVPTYEMVEAVCA-IPPGSAFDSFLSSYNQQTIKK------KRRSLEIHFITVGERGIVR 277
V T +CA P D +S+ QT++ ++++L + RGI
Sbjct: 129 CVLTGHNHYVMCAQFHPSE--DLVVSASLDQTVRVWDISGLRKKNLSPGAVESDVRGIT- 185
Query: 278 MWNADSACLYEQKSSDVTISFEMDDSKRGFTAATVLPSNQGLLCVTADQQLLLYTTVEVP 337
D L+ ++D + ++ RG A P+ ++ D+Q+ ++ E
Sbjct: 186 --GVD---LFG--TTDAVVKHVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNE-- 236
Query: 338 EKKMELILSKRLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLS 384
K E+ + G+ + F +E L+ + + + ++V+D+S
Sbjct: 237 SKAWEVDTCR---GHYNNVSCAVFHPRQELILSNSED-KSIRVWDMS 279
Score = 131 (51.2 bits), Expect = 0.00016, P = 0.00016
Identities = 34/113 (30%), Positives = 54/113 (47%)
Query: 99 KGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHY--FKGHKGVVSSILFHPDT 156
+GHD A HP+ L+ + DR+V +W ++ +GH VS +FHP
Sbjct: 202 EGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNESKAWEVDTCRGHYNNVSCAVFHPRQ 261
Query: 157 DKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRD 209
+ L+ S S+D ++RVWD+ + V T + R +A L +AG D
Sbjct: 262 E--LILSNSEDKSIRVWDMSKRTGVQTFRRDHDRFWVLA-AHPNLNLFAAGHD 311
Score = 126 (49.4 bits), Expect = 0.00054, P = 0.00054
Identities = 41/180 (22%), Positives = 76/180 (42%)
Query: 40 ESINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWK 99
++I + + + + + G + + P + L+ S+ + +RVWD+S L+ K
Sbjct: 115 QTIRVWNWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDISGLR-----K 169
Query: 100 GHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKS 159
+ P G G+ G D ++ H +GH V+ FHP
Sbjct: 170 KNLSP--GAVESDVRGI---TGVD----LFGTTDAVVKHVLEGHDRGVNWAAFHPTMP-- 218
Query: 160 LLFSGSDDATVRVWDLLAKKC--VATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDL 217
L+ SG+DD V++W + K V T H++ V+ ++S DK + +WD+
Sbjct: 219 LIVSGADDRQVKIWRMNESKAWEVDTCRGHYNNVSCAVFHPRQELILSNSEDKSIRVWDM 278
Score = 99 (39.9 bits), Expect = 1.1e-11, Sum P(2) = 1.1e-11
Identities = 23/79 (29%), Positives = 37/79 (46%)
Query: 55 TIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPSG 114
T+ G D I + + S+ + IRVW+ + C+ GH+ + HPS
Sbjct: 88 TLLGHLDYIRTTFFHHEYPWILSASDDQTIRVWNWQSRTCVCVLTGHNHYVMCAQFHPSE 147
Query: 115 GLLATAGADRKVLVWDVDG 133
L+ +A D+ V VWD+ G
Sbjct: 148 DLVVSASLDQTVRVWDISG 166
>MGI|MGI:1334462 [details] [associations]
symbol:Copa "coatomer protein complex subunit alpha"
species:10090 "Mus musculus" [GO:0005179 "hormone activity"
evidence=IEA] [GO:0005198 "structural molecule activity"
evidence=IEA] [GO:0005576 "extracellular region" evidence=IEA]
[GO:0005615 "extracellular space" evidence=ISO] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0030117 "membrane coat" evidence=IEA] [GO:0030126
"COPI vesicle coat" evidence=ISO] [GO:0030157 "pancreatic juice
secretion" evidence=ISO] [GO:0031410 "cytoplasmic vesicle"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR010714 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 Pfam:PF06957 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1334462 GO:GO:0006886
GO:GO:0005615 GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005198 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030157 GO:GO:0030126
HSSP:P63005 HOGENOM:HOG000195913 KO:K05236 InterPro:IPR016391
PIRSF:PIRSF003354 CTD:1314 GeneTree:ENSGT00600000084501
HOVERGEN:HBG005379 ChiTaRS:COPA EMBL:AC158930 EMBL:BC024070
EMBL:BC047429 IPI:IPI00229834 RefSeq:NP_034068.3 UniGene:Mm.30041
ProteinModelPortal:Q8CIE6 SMR:Q8CIE6 IntAct:Q8CIE6 STRING:Q8CIE6
PhosphoSite:Q8CIE6 PaxDb:Q8CIE6 PRIDE:Q8CIE6
Ensembl:ENSMUST00000135192 GeneID:12847 KEGG:mmu:12847
UCSC:uc007dpn.2 InParanoid:Q8CIE6 NextBio:282392 Bgee:Q8CIE6
Genevestigator:Q8CIE6 Uniprot:Q8CIE6
Length = 1224
Score = 218 (81.8 bits), Expect = 6.4e-14, P = 6.4e-14
Identities = 60/218 (27%), Positives = 104/218 (47%)
Query: 377 QVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGV 436
+++V++ C + L GH + + T I++ S D ++R+W+ +SR CV V
Sbjct: 74 KIKVWNYKLRRCLFTLLGHLDYIR---TTFFHHEYPWILSASDDQTIRVWNWQSRTCVCV 130
Query: 437 GTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGL-----------SD-------DA 478
TGH V F ++ +VS S D T++VW GL SD D
Sbjct: 131 LTGHNHYVMCAQFHPS-EDLVVSASLDQTVRVWDISGLRKKNLSPGAVESDVRGITGVDL 189
Query: 479 EQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVS--VVTFRGHK 536
+ K V+ H + +N A P L+ +G+ DR +WR+ + + V T RGH
Sbjct: 190 FGTTDAVVKHVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNESKAWEVDTCRGHY 249
Query: 537 RGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTF 574
+ F P +++++ S DK+I++W +S + ++TF
Sbjct: 250 NNVSCAVFHPRQELILSNSEDKSIRVWDMSKRTGVQTF 287
Score = 198 (74.8 bits), Expect = 3.8e-22, Sum P(2) = 3.8e-22
Identities = 45/161 (27%), Positives = 71/161 (44%)
Query: 57 EGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPSGGL 116
E S + L+ P + +S H+ I++WD + + HDGP G+ H L
Sbjct: 6 ETKSARVKGLSFHPKRPWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFHKQQPL 65
Query: 117 LATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLL 176
+ G D K+ VW+ C GH + + FH + + S SDD T+RVW+
Sbjct: 66 FVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYP--WILSASDDQTIRVWNWQ 123
Query: 177 AKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDL 217
++ CV L H V ++SA D+ V +WD+
Sbjct: 124 SRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDI 164
Score = 151 (58.2 bits), Expect = 3.8e-22, Sum P(2) = 3.8e-22
Identities = 35/125 (28%), Positives = 62/125 (49%)
Query: 525 DLVSVVTFRGHKRGI-WSVEFSPVDQVVITASGDKTIKIWSISDGSC--LKTFEGHTSSV 581
D V GH RG+ W+ F P ++++ + D+ +KIW +++ + T GH ++V
Sbjct: 194 DAVVKHVLEGHDRGVNWAA-FHPTMPLIVSGADDRQVKIWRMNESKAWEVDTCRGHYNNV 252
Query: 582 LRASFLTRGAQIVSCGADGLVKLWTV--RTGECIATYDKHEDKIWALAVGKKTEMFATGG 639
A F R I+S D +++W + RTG + T+ + D+ W LA +FA G
Sbjct: 253 SCAVFHPRQELILSNSEDKSIRVWDMSKRTG--VQTFRRDHDRFWVLAAHPNLNLFAAGH 310
Query: 640 SDALV 644
++
Sbjct: 311 DGGMI 315
Score = 147 (56.8 bits), Expect = 3.0e-06, P = 3.0e-06
Identities = 58/235 (24%), Positives = 95/235 (40%)
Query: 414 IVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDG 473
I+T + ++LWD + H G V + F K+ Q VSG D+ IKVW++
Sbjct: 24 ILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFHKQ-QPLFVSGGDDYKIKVWNYK- 81
Query: 474 LSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFR 533
L + + H I + + + S D+T VW V
Sbjct: 82 LR---------RCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVWNWQSRTCVCVLT 132
Query: 534 GHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFE-GHTSSVLRASFLTRGAQ 592
GH + +F P + +V++AS D+T+++W IS G K G S +R +T G
Sbjct: 133 GHNHYVMCAQFHPSEDLVVSASLDQTVRVWDIS-GLRKKNLSPGAVESDVRG--IT-GVD 188
Query: 593 IVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLW 647
+ D +VK + +D+ + WA A + +G D V +W
Sbjct: 189 LFGT-TDAVVK-------HVLEGHDRGVN--WA-AFHPTMPLIVSGADDRQVKIW 232
Score = 139 (54.0 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 63/287 (21%), Positives = 125/287 (43%)
Query: 107 GMACHPSGGLLATAGADRKVLVWDVDGGFCT--HYFKGHKGVVSSILFHPDTDKSLLFSG 164
G++ HP + T+ + + +WD CT F H G V I FH + L SG
Sbjct: 14 GLSFHPKRPWILTSLHNGVIQLWDYR--MCTLIDKFDEHDGPVRGIDFHKQ--QPLFVSG 69
Query: 165 SDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKL 224
DD ++VW+ ++C+ TL H + + + ++SA D+ + +W+ + +C +
Sbjct: 70 GDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVWNWQSRTC-V 128
Query: 225 TVPTYEMVEAVCA-IPPGSAFDSFLSSYNQQTIKK------KRRSLEIHFITVGERGIVR 277
V T +CA P D +S+ QT++ ++++L + RGI
Sbjct: 129 CVLTGHNHYVMCAQFHPSE--DLVVSASLDQTVRVWDISGLRKKNLSPGAVESDVRGIT- 185
Query: 278 MWNADSACLYEQKSSDVTISFEMDDSKRGFTAATVLPSNQGLLCVTADQQLLLYTTVEVP 337
D L+ ++D + ++ RG A P+ ++ D+Q+ ++ E
Sbjct: 186 --GVD---LFG--TTDAVVKHVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNE-- 236
Query: 338 EKKMELILSKRLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLS 384
K E+ + G+ + F +E L+ + + + ++V+D+S
Sbjct: 237 SKAWEVDTCR---GHYNNVSCAVFHPRQELILSNSED-KSIRVWDMS 279
Score = 131 (51.2 bits), Expect = 0.00016, P = 0.00016
Identities = 34/113 (30%), Positives = 54/113 (47%)
Query: 99 KGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHY--FKGHKGVVSSILFHPDT 156
+GHD A HP+ L+ + DR+V +W ++ +GH VS +FHP
Sbjct: 202 EGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNESKAWEVDTCRGHYNNVSCAVFHPRQ 261
Query: 157 DKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRD 209
+ L+ S S+D ++RVWD+ + V T + R +A L +AG D
Sbjct: 262 E--LILSNSEDKSIRVWDMSKRTGVQTFRRDHDRFWVLA-AHPNLNLFAAGHD 311
Score = 126 (49.4 bits), Expect = 0.00054, P = 0.00054
Identities = 41/180 (22%), Positives = 76/180 (42%)
Query: 40 ESINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWK 99
++I + + + + + G + + P + L+ S+ + +RVWD+S L+ K
Sbjct: 115 QTIRVWNWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDISGLR-----K 169
Query: 100 GHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKS 159
+ P G G+ G D ++ H +GH V+ FHP
Sbjct: 170 KNLSP--GAVESDVRGI---TGVD----LFGTTDAVVKHVLEGHDRGVNWAAFHPTMP-- 218
Query: 160 LLFSGSDDATVRVWDLLAKKC--VATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDL 217
L+ SG+DD V++W + K V T H++ V+ ++S DK + +WD+
Sbjct: 219 LIVSGADDRQVKIWRMNESKAWEVDTCRGHYNNVSCAVFHPRQELILSNSEDKSIRVWDM 278
Score = 99 (39.9 bits), Expect = 1.1e-11, Sum P(2) = 1.1e-11
Identities = 23/79 (29%), Positives = 37/79 (46%)
Query: 55 TIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPSG 114
T+ G D I + + S+ + IRVW+ + C+ GH+ + HPS
Sbjct: 88 TLLGHLDYIRTTFFHHEYPWILSASDDQTIRVWNWQSRTCVCVLTGHNHYVMCAQFHPSE 147
Query: 115 GLLATAGADRKVLVWDVDG 133
L+ +A D+ V VWD+ G
Sbjct: 148 DLVVSASLDQTVRVWDISG 166
>UNIPROTKB|G3V6T1 [details] [associations]
symbol:Copa "Protein Copa" species:10116 "Rattus
norvegicus" [GO:0005198 "structural molecule activity"
evidence=IEA] [GO:0005615 "extracellular space" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0030126
"COPI vesicle coat" evidence=IEA] [GO:0030157 "pancreatic juice
secretion" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR010714 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 Pfam:PF06957 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 RGD:1310525 GO:GO:0006886
GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005198 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030126 KO:K05236 InterPro:IPR016391 PIRSF:PIRSF003354
CTD:1314 GeneTree:ENSGT00600000084501 OMA:FWVLGAH EMBL:CH473985
RefSeq:NP_001128012.1 UniGene:Rn.203109 ProteinModelPortal:G3V6T1
PRIDE:G3V6T1 Ensembl:ENSRNOT00000008518 GeneID:304978
KEGG:rno:304978 NextBio:653932 Uniprot:G3V6T1
Length = 1224
Score = 218 (81.8 bits), Expect = 6.4e-14, P = 6.4e-14
Identities = 60/218 (27%), Positives = 104/218 (47%)
Query: 377 QVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGV 436
+++V++ C + L GH + + T I++ S D ++R+W+ +SR CV V
Sbjct: 74 KIKVWNYKLRRCLFTLLGHLDYIR---TTFFHHEYPWILSASDDQTIRVWNWQSRTCVCV 130
Query: 437 GTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGL-----------SD-------DA 478
TGH V F ++ +VS S D T++VW GL SD D
Sbjct: 131 LTGHNHYVMCAQFHPS-EDLVVSASLDQTVRVWDISGLRKKNLSPGAVESDVRGITGVDL 189
Query: 479 EQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVS--VVTFRGHK 536
+ K V+ H + +N A P L+ +G+ DR +WR+ + + V T RGH
Sbjct: 190 FGTTDAVVKHVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNESKAWEVDTCRGHY 249
Query: 537 RGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTF 574
+ F P +++++ S DK+I++W +S + ++TF
Sbjct: 250 NNVSCAVFHPRQELILSNSEDKSIRVWDMSKRTGVQTF 287
Score = 198 (74.8 bits), Expect = 3.8e-22, Sum P(2) = 3.8e-22
Identities = 45/161 (27%), Positives = 71/161 (44%)
Query: 57 EGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPSGGL 116
E S + L+ P + +S H+ I++WD + + HDGP G+ H L
Sbjct: 6 ETKSARVKGLSFHPKRPWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFHKQQPL 65
Query: 117 LATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLL 176
+ G D K+ VW+ C GH + + FH + + S SDD T+RVW+
Sbjct: 66 FVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYP--WILSASDDQTIRVWNWQ 123
Query: 177 AKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDL 217
++ CV L H V ++SA D+ V +WD+
Sbjct: 124 SRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDI 164
Score = 151 (58.2 bits), Expect = 3.8e-22, Sum P(2) = 3.8e-22
Identities = 35/125 (28%), Positives = 62/125 (49%)
Query: 525 DLVSVVTFRGHKRGI-WSVEFSPVDQVVITASGDKTIKIWSISDGSC--LKTFEGHTSSV 581
D V GH RG+ W+ F P ++++ + D+ +KIW +++ + T GH ++V
Sbjct: 194 DAVVKHVLEGHDRGVNWAA-FHPTMPLIVSGADDRQVKIWRMNESKAWEVDTCRGHYNNV 252
Query: 582 LRASFLTRGAQIVSCGADGLVKLWTV--RTGECIATYDKHEDKIWALAVGKKTEMFATGG 639
A F R I+S D +++W + RTG + T+ + D+ W LA +FA G
Sbjct: 253 SCAVFHPRQELILSNSEDKSIRVWDMSKRTG--VQTFRRDHDRFWVLAAHPNLNLFAAGH 310
Query: 640 SDALV 644
++
Sbjct: 311 DGGMI 315
Score = 147 (56.8 bits), Expect = 3.0e-06, P = 3.0e-06
Identities = 58/235 (24%), Positives = 95/235 (40%)
Query: 414 IVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDG 473
I+T + ++LWD + H G V + F K+ Q VSG D+ IKVW++
Sbjct: 24 ILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFHKQ-QPLFVSGGDDYKIKVWNYK- 81
Query: 474 LSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFR 533
L + + H I + + + S D+T VW V
Sbjct: 82 LR---------RCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVWNWQSRTCVCVLT 132
Query: 534 GHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFE-GHTSSVLRASFLTRGAQ 592
GH + +F P + +V++AS D+T+++W IS G K G S +R +T G
Sbjct: 133 GHNHYVMCAQFHPSEDLVVSASLDQTVRVWDIS-GLRKKNLSPGAVESDVRG--IT-GVD 188
Query: 593 IVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLW 647
+ D +VK + +D+ + WA A + +G D V +W
Sbjct: 189 LFGT-TDAVVK-------HVLEGHDRGVN--WA-AFHPTMPLIVSGADDRQVKIW 232
Score = 139 (54.0 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 63/287 (21%), Positives = 125/287 (43%)
Query: 107 GMACHPSGGLLATAGADRKVLVWDVDGGFCT--HYFKGHKGVVSSILFHPDTDKSLLFSG 164
G++ HP + T+ + + +WD CT F H G V I FH + L SG
Sbjct: 14 GLSFHPKRPWILTSLHNGVIQLWDYR--MCTLIDKFDEHDGPVRGIDFHKQ--QPLFVSG 69
Query: 165 SDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKL 224
DD ++VW+ ++C+ TL H + + + ++SA D+ + +W+ + +C +
Sbjct: 70 GDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVWNWQSRTC-V 128
Query: 225 TVPTYEMVEAVCA-IPPGSAFDSFLSSYNQQTIKK------KRRSLEIHFITVGERGIVR 277
V T +CA P D +S+ QT++ ++++L + RGI
Sbjct: 129 CVLTGHNHYVMCAQFHPSE--DLVVSASLDQTVRVWDISGLRKKNLSPGAVESDVRGIT- 185
Query: 278 MWNADSACLYEQKSSDVTISFEMDDSKRGFTAATVLPSNQGLLCVTADQQLLLYTTVEVP 337
D L+ ++D + ++ RG A P+ ++ D+Q+ ++ E
Sbjct: 186 --GVD---LFG--TTDAVVKHVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNE-- 236
Query: 338 EKKMELILSKRLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLS 384
K E+ + G+ + F +E L+ + + + ++V+D+S
Sbjct: 237 SKAWEVDTCR---GHYNNVSCAVFHPRQELILSNSED-KSIRVWDMS 279
Score = 131 (51.2 bits), Expect = 0.00016, P = 0.00016
Identities = 34/113 (30%), Positives = 54/113 (47%)
Query: 99 KGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHY--FKGHKGVVSSILFHPDT 156
+GHD A HP+ L+ + DR+V +W ++ +GH VS +FHP
Sbjct: 202 EGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNESKAWEVDTCRGHYNNVSCAVFHPRQ 261
Query: 157 DKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRD 209
+ L+ S S+D ++RVWD+ + V T + R +A L +AG D
Sbjct: 262 E--LILSNSEDKSIRVWDMSKRTGVQTFRRDHDRFWVLA-AHPNLNLFAAGHD 311
Score = 126 (49.4 bits), Expect = 0.00054, P = 0.00054
Identities = 41/180 (22%), Positives = 76/180 (42%)
Query: 40 ESINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWK 99
++I + + + + + G + + P + L+ S+ + +RVWD+S L+ K
Sbjct: 115 QTIRVWNWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDISGLR-----K 169
Query: 100 GHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKS 159
+ P G G+ G D ++ H +GH V+ FHP
Sbjct: 170 KNLSP--GAVESDVRGI---TGVD----LFGTTDAVVKHVLEGHDRGVNWAAFHPTMP-- 218
Query: 160 LLFSGSDDATVRVWDLLAKKC--VATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDL 217
L+ SG+DD V++W + K V T H++ V+ ++S DK + +WD+
Sbjct: 219 LIVSGADDRQVKIWRMNESKAWEVDTCRGHYNNVSCAVFHPRQELILSNSEDKSIRVWDM 278
Score = 99 (39.9 bits), Expect = 1.1e-11, Sum P(2) = 1.1e-11
Identities = 23/79 (29%), Positives = 37/79 (46%)
Query: 55 TIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPSG 114
T+ G D I + + S+ + IRVW+ + C+ GH+ + HPS
Sbjct: 88 TLLGHLDYIRTTFFHHEYPWILSASDDQTIRVWNWQSRTCVCVLTGHNHYVMCAQFHPSE 147
Query: 115 GLLATAGADRKVLVWDVDG 133
L+ +A D+ V VWD+ G
Sbjct: 148 DLVVSASLDQTVRVWDISG 166
>FB|FBgn0033557 [details] [associations]
symbol:CG12325 species:7227 "Drosophila melanogaster"
[GO:0022008 "neurogenesis" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:AE013599 GO:GO:0022008
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR011047
SUPFAM:SSF50998 GeneTree:ENSGT00550000074981 KO:K14558 OMA:VWQCDTP
InterPro:IPR027145 InterPro:IPR007148 PANTHER:PTHR19858
Pfam:PF04003 EMBL:BT016114 RefSeq:NP_610618.1 UniGene:Dm.12871
SMR:Q5U0X8 STRING:Q5U0X8 EnsemblMetazoa:FBtr0088227 GeneID:36144
KEGG:dme:Dmel_CG12325 UCSC:CG12325-RA FlyBase:FBgn0033557
InParanoid:Q5U0X8 OrthoDB:EOG4SN03M GenomeRNAi:36144 NextBio:797070
Uniprot:Q5U0X8
Length = 949
Score = 292 (107.8 bits), Expect = 4.1e-22, P = 4.1e-22
Identities = 150/665 (22%), Positives = 268/665 (40%)
Query: 6 LKKSYGCEPVLQQFYGGGPLVVSSDGSFIACACGESINIVDLSNASIKSTIEGGSDTITA 65
+K SY +L Y G LV + DG+ + G I + DL N ++ T
Sbjct: 1 MKFSYKFSNLLGTIYRNGNLVFTPDGNSVISPVGNRITVYDLKNNKSRTLSLESRYNYTN 60
Query: 66 LALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACH-PSGGLLATAGADR 124
+ALSPD LL + E ++ + + + K G + C P+G A A
Sbjct: 61 IALSPDGSLLIAVNEKGEAQLISMMSCTVIHRHKFQTG--VQCICFSPNGAFFAVA-VQN 117
Query: 125 KVLVWDVDGGFCTHY--F---KGHKGVVSSILFHP-DTDKSLLFSGSDDATVRVWDLLAK 178
VL++ G Y F + G + + +D LL G D++ ++ +
Sbjct: 118 VVLIFCAPGEITGEYNPFVLRRRFLGGFDDVTWLDWSSDSRLLAIGCRDSSTKIVAINYT 177
Query: 179 KCVAT--LDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYEMVEAVC 236
K T L H + + ++ L + R+ + LW+ C L E E
Sbjct: 178 KNFRTYNLSGHTDAIVACFFEANSLHLNTISRNGQLCLWE-----CSLAPSDLEDAERPK 232
Query: 237 AIPPGSAFDSFLSSYNQQT--IKK--KRRSLEIHFITVGERGIVRMWNADSACLYEQKSS 292
PP + S N+ ++ ++ +L+ E + + N D +
Sbjct: 233 IAPPQRKKEKKAVSDNESEDDVENVVEKDALKEESTKEAE-DVNHIKNEDETKSHPFFYK 291
Query: 293 DVTISFEMDDSKRG-----FTAATVLPSNQGLLCVTADQQLLLYTTVEVPEKKMELILSK 347
+T + D+ ++ TAA + L+ + LY E+P+ M I S
Sbjct: 292 KITRHYLADEPRKEQRDVQLTAANYNTRTKVLVVAFSSGAFYLY---ELPDVNM--IHSL 346
Query: 348 RLVGYNEEILDLKFLGEEEQYLAVATN-IEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCA 406
+ Y G+ ++A+A+ I Q+ V++ S GHS + C+ A
Sbjct: 347 SISDYPISAALFNCTGD---WVALASREIGQLLVWEWQSEQYIMKQQGHSSEMTCI---A 400
Query: 407 LSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTI 466
SS I TG +D+ V+LW+++S C + H V + FS+ + FLVS S D T+
Sbjct: 401 YSSDGQFIATGGEDSKVKLWNTQSSFCFVTFSEHTSGVTGIQFSRN-KKFLVSSSLDGTV 459
Query: 467 KVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDR-TACVWRLPD 525
+ + D + N + + + + +AV + LV G QD +W +
Sbjct: 460 RAF-------DVNRYRNFRT--FTSPNPAQFSCVAVDYSGELVVAGGQDVFDIFLWSVKT 510
Query: 526 --LVSVVTFRGHKRGIWSVEFSPV--DQVVITASGDKTIKIWS-ISDGSCLKTFEGHTSS 580
L+ +++ GH+ + S+ FSPV +++ S DKT+KIW+ + S +T + S
Sbjct: 511 GKLLEIIS--GHEGPVVSIAFSPVATSSTLVSGSWDKTVKIWNCLESNSEHETIDA-VSD 567
Query: 581 VLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGS 640
V +F G +I G + ++ +++ + T + D L+ G+ T
Sbjct: 568 VTNVTFSPSGEEIAVATLSGNITIFDIKSAGQVTTIEGRND----LSAGRLETDIITARK 623
Query: 641 DALVN 645
+A N
Sbjct: 624 NAQAN 628
Score = 148 (57.2 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 34/160 (21%), Positives = 71/160 (44%)
Query: 493 HGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVI 552
H ++ +A + + + TG +D +W VTF H G+ ++FS + ++
Sbjct: 392 HSSEMTCIAYSSDGQFIATGGEDSKVKLWNTQSSFCFVTFSEHTSGVTGIQFSRNKKFLV 451
Query: 553 TASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGL--VKLWTVRTG 610
++S D T++ + ++ +TF + + ++V G + + LW+V+TG
Sbjct: 452 SSSLDGTVRAFDVNRYRNFRTFTSPNPAQFSCVAVDYSGELVVAGGQDVFDIFLWSVKTG 511
Query: 611 ECIATYDKHEDKIWALAVGK-KTEMFATGGS-DALVNLWH 648
+ + HE + ++A T GS D V +W+
Sbjct: 512 KLLEIISGHEGPVVSIAFSPVATSSTLVSGSWDKTVKIWN 551
Score = 131 (51.2 bits), Expect = 0.00012, P = 0.00012
Identities = 34/134 (25%), Positives = 53/134 (39%)
Query: 520 VWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTS 579
VW ++ +GH + + +S Q + T D +K+W+ C TF HTS
Sbjct: 377 VWEWQSEQYIMKQQGHSSEMTCIAYSSDGQFIATGGEDSKVKLWNTQSSFCFVTFSEHTS 436
Query: 580 SVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDK-HEDKIWALAVGKKTEMFATG 638
V F +VS DG V+ + V T+ + + +AV E+ G
Sbjct: 437 GVTGIQFSRNKKFLVSSSLDGTVRAFDVNRYRNFRTFTSPNPAQFSCVAVDYSGELVVAG 496
Query: 639 GSDAL-VNLWHDST 651
G D + LW T
Sbjct: 497 GQDVFDIFLWSVKT 510
>UNIPROTKB|P53621 [details] [associations]
symbol:COPA "Coatomer subunit alpha" species:9606 "Homo
sapiens" [GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0005179 "hormone activity" evidence=IEA] [GO:0030126 "COPI
vesicle coat" evidence=ISS;IDA] [GO:0005615 "extracellular space"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0030157
"pancreatic juice secretion" evidence=IDA] [GO:0005829 "cytosol"
evidence=TAS] [GO:0006890 "retrograde vesicle-mediated transport,
Golgi to ER" evidence=TAS] [GO:0016044 "cellular membrane
organization" evidence=TAS] [GO:0048205 "COPI coating of Golgi
vesicle" evidence=TAS] Reactome:REACT_11123 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR010714
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053 Pfam:PF06957
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005829
GO:GO:0006886 GO:GO:0005615 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005198 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030157 EMBL:CH471121
Pathway_Interaction_DB:arf_3pathway GO:GO:0030126 GO:GO:0048205
GO:GO:0006890 HOGENOM:HOG000195913 KO:K05236 InterPro:IPR016391
PIRSF:PIRSF003354 CTD:1314 HOVERGEN:HBG005379 OMA:FWVLGAH
EMBL:U24105 EMBL:AL513282 EMBL:AL445230 EMBL:BC038447
IPI:IPI00295857 IPI:IPI00646493 PIR:JC4668 RefSeq:NP_001091868.1
RefSeq:NP_004362.2 UniGene:Hs.162121 UniGene:Hs.685025
ProteinModelPortal:P53621 SMR:P53621 IntAct:P53621
MINT:MINT-1144184 STRING:P53621 PhosphoSite:P53621 DMDM:205371746
PaxDb:P53621 PRIDE:P53621 Ensembl:ENST00000241704
Ensembl:ENST00000368069 GeneID:1314 KEGG:hsa:1314 UCSC:uc001fvv.4
UCSC:uc009wti.3 GeneCards:GC01M160258 HGNC:HGNC:2230 HPA:HPA028024
MIM:601924 neXtProt:NX_P53621 PharmGKB:PA26746 PhylomeDB:P53621
ChiTaRS:COPA GenomeRNAi:1314 NextBio:5373 Bgee:P53621
CleanEx:HS_COPA Genevestigator:P53621 GermOnline:ENSG00000122218
Uniprot:P53621
Length = 1224
Score = 217 (81.4 bits), Expect = 8.3e-14, P = 8.3e-14
Identities = 60/218 (27%), Positives = 104/218 (47%)
Query: 377 QVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGV 436
+++V++ C + L GH + + T I++ S D ++R+W+ +SR CV V
Sbjct: 74 KIKVWNYKLRRCLFTLLGHLDYIR---TTFFHHEYPWILSASDDQTIRVWNWQSRTCVCV 130
Query: 437 GTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGL-----------SD-------DA 478
TGH V F ++ +VS S D T++VW GL SD D
Sbjct: 131 LTGHNHYVMCAQFHPT-EDLVVSASLDQTVRVWDISGLRKKNLSPGAVESDVRGITGVDL 189
Query: 479 EQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVS--VVTFRGHK 536
+ K V+ H + +N A P L+ +G+ DR +WR+ + + V T RGH
Sbjct: 190 FGTTDAVVKHVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNESKAWEVDTCRGHY 249
Query: 537 RGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTF 574
+ F P +++++ S DK+I++W +S + ++TF
Sbjct: 250 NNVSCAVFHPRQELILSNSEDKSIRVWDMSKRTGVQTF 287
Score = 197 (74.4 bits), Expect = 4.8e-22, Sum P(2) = 4.8e-22
Identities = 45/161 (27%), Positives = 71/161 (44%)
Query: 57 EGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPSGGL 116
E S + L+ P + +S H+ I++WD + + HDGP G+ H L
Sbjct: 6 ETKSARVKGLSFHPKRPWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFHKQQPL 65
Query: 117 LATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLL 176
+ G D K+ VW+ C GH + + FH + + S SDD T+RVW+
Sbjct: 66 FVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYP--WILSASDDQTIRVWNWQ 123
Query: 177 AKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDL 217
++ CV L H V ++SA D+ V +WD+
Sbjct: 124 SRTCVCVLTGHNHYVMCAQFHPTEDLVVSASLDQTVRVWDI 164
Score = 151 (58.2 bits), Expect = 4.8e-22, Sum P(2) = 4.8e-22
Identities = 35/125 (28%), Positives = 62/125 (49%)
Query: 525 DLVSVVTFRGHKRGI-WSVEFSPVDQVVITASGDKTIKIWSISDGSC--LKTFEGHTSSV 581
D V GH RG+ W+ F P ++++ + D+ +KIW +++ + T GH ++V
Sbjct: 194 DAVVKHVLEGHDRGVNWAA-FHPTMPLIVSGADDRQVKIWRMNESKAWEVDTCRGHYNNV 252
Query: 582 LRASFLTRGAQIVSCGADGLVKLWTV--RTGECIATYDKHEDKIWALAVGKKTEMFATGG 639
A F R I+S D +++W + RTG + T+ + D+ W LA +FA G
Sbjct: 253 SCAVFHPRQELILSNSEDKSIRVWDMSKRTG--VQTFRRDHDRFWVLAAHPNLNLFAAGH 310
Query: 640 SDALV 644
++
Sbjct: 311 DGGMI 315
Score = 149 (57.5 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 58/235 (24%), Positives = 95/235 (40%)
Query: 414 IVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDG 473
I+T + ++LWD + H G V + F K+ Q VSG D+ IKVW++
Sbjct: 24 ILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFHKQ-QPLFVSGGDDYKIKVWNYK- 81
Query: 474 LSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFR 533
L + + H I + + + S D+T VW V
Sbjct: 82 LR---------RCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVWNWQSRTCVCVLT 132
Query: 534 GHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFE-GHTSSVLRASFLTRGAQ 592
GH + +F P + +V++AS D+T+++W IS G K G S +R +T G
Sbjct: 133 GHNHYVMCAQFHPTEDLVVSASLDQTVRVWDIS-GLRKKNLSPGAVESDVRG--IT-GVD 188
Query: 593 IVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLW 647
+ D +VK + +D+ + WA A + +G D V +W
Sbjct: 189 LFGT-TDAVVK-------HVLEGHDRGVN--WA-AFHPTMPLIVSGADDRQVKIW 232
Score = 137 (53.3 bits), Expect = 3.5e-05, P = 3.5e-05
Identities = 63/287 (21%), Positives = 125/287 (43%)
Query: 107 GMACHPSGGLLATAGADRKVLVWDVDGGFCT--HYFKGHKGVVSSILFHPDTDKSLLFSG 164
G++ HP + T+ + + +WD CT F H G V I FH + L SG
Sbjct: 14 GLSFHPKRPWILTSLHNGVIQLWDYR--MCTLIDKFDEHDGPVRGIDFHKQ--QPLFVSG 69
Query: 165 SDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKL 224
DD ++VW+ ++C+ TL H + + + ++SA D+ + +W+ + +C +
Sbjct: 70 GDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVWNWQSRTC-V 128
Query: 225 TVPTYEMVEAVCA-IPPGSAFDSFLSSYNQQTIKK------KRRSLEIHFITVGERGIVR 277
V T +CA P D +S+ QT++ ++++L + RGI
Sbjct: 129 CVLTGHNHYVMCAQFHPTE--DLVVSASLDQTVRVWDISGLRKKNLSPGAVESDVRGIT- 185
Query: 278 MWNADSACLYEQKSSDVTISFEMDDSKRGFTAATVLPSNQGLLCVTADQQLLLYTTVEVP 337
D L+ ++D + ++ RG A P+ ++ D+Q+ ++ E
Sbjct: 186 --GVD---LFG--TTDAVVKHVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNE-- 236
Query: 338 EKKMELILSKRLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLS 384
K E+ + G+ + F +E L+ + + + ++V+D+S
Sbjct: 237 SKAWEVDTCR---GHYNNVSCAVFHPRQELILSNSED-KSIRVWDMS 279
Score = 131 (51.2 bits), Expect = 0.00016, P = 0.00016
Identities = 34/113 (30%), Positives = 54/113 (47%)
Query: 99 KGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHY--FKGHKGVVSSILFHPDT 156
+GHD A HP+ L+ + DR+V +W ++ +GH VS +FHP
Sbjct: 202 EGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNESKAWEVDTCRGHYNNVSCAVFHPRQ 261
Query: 157 DKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRD 209
+ L+ S S+D ++RVWD+ + V T + R +A L +AG D
Sbjct: 262 E--LILSNSEDKSIRVWDMSKRTGVQTFRRDHDRFWVLA-AHPNLNLFAAGHD 311
Score = 125 (49.1 bits), Expect = 0.00069, P = 0.00069
Identities = 41/180 (22%), Positives = 76/180 (42%)
Query: 40 ESINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWK 99
++I + + + + + G + + P + L+ S+ + +RVWD+S L+ K
Sbjct: 115 QTIRVWNWQSRTCVCVLTGHNHYVMCAQFHPTEDLVVSASLDQTVRVWDISGLR-----K 169
Query: 100 GHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKS 159
+ P G G+ G D ++ H +GH V+ FHP
Sbjct: 170 KNLSP--GAVESDVRGI---TGVD----LFGTTDAVVKHVLEGHDRGVNWAAFHPTMP-- 218
Query: 160 LLFSGSDDATVRVWDLLAKKC--VATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDL 217
L+ SG+DD V++W + K V T H++ V+ ++S DK + +WD+
Sbjct: 219 LIVSGADDRQVKIWRMNESKAWEVDTCRGHYNNVSCAVFHPRQELILSNSEDKSIRVWDM 278
Score = 96 (38.9 bits), Expect = 2.3e-11, Sum P(2) = 2.3e-11
Identities = 22/79 (27%), Positives = 37/79 (46%)
Query: 55 TIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPSG 114
T+ G D I + + S+ + IRVW+ + C+ GH+ + HP+
Sbjct: 88 TLLGHLDYIRTTFFHHEYPWILSASDDQTIRVWNWQSRTCVCVLTGHNHYVMCAQFHPTE 147
Query: 115 GLLATAGADRKVLVWDVDG 133
L+ +A D+ V VWD+ G
Sbjct: 148 DLVVSASLDQTVRVWDISG 166
>RGD|621245 [details] [associations]
symbol:Plaa "phospholipase A2, activating protein" species:10116
"Rattus norvegicus" [GO:0006954 "inflammatory response"
evidence=IEA;ISO] [GO:0016005 "phospholipase A2 activator activity"
evidence=IEA;ISO] [GO:0043085 "positive regulation of catalytic
activity" evidence=ISO] [GO:0070062 "extracellular vesicular
exosome" evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50176
PROSITE:PS50294 SMART:SM00320 RGD:621245 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 eggNOG:COG2319 GO:GO:0006954
GO:GO:0016005 GeneTree:ENSGT00550000074944 HOGENOM:HOG000174247
KO:K14018 InterPro:IPR015155 InterPro:IPR013535 Pfam:PF09070
Pfam:PF08324 PROSITE:PS51394 PROSITE:PS51396 CTD:9373
HOVERGEN:HBG008204 OMA:VSECCRF OrthoDB:EOG4DJJVW EMBL:AABR03040245
EMBL:U17901 IPI:IPI00562304 PIR:JC4239 RefSeq:NP_446318.3
UniGene:Rn.7441 ProteinModelPortal:P54319 MINT:MINT-4299720
STRING:P54319 PhosphoSite:P54319 PRIDE:P54319
Ensembl:ENSRNOT00000010621 GeneID:116645 KEGG:rno:116645
UCSC:RGD:621245 InParanoid:P54319 NextBio:619383
ArrayExpress:P54319 Genevestigator:P54319
GermOnline:ENSRNOG00000007753 Uniprot:P54319
Length = 795
Score = 290 (107.1 bits), Expect = 4.9e-22, P = 4.9e-22
Identities = 84/270 (31%), Positives = 130/270 (48%)
Query: 386 MSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLW--DSESRCCVGVG--TGHM 441
+SCS L GH V L C G + V S+D + RLW DS +R + +GH
Sbjct: 10 LSCS--LPGHELDVRGLVCCLYPPGAFVSV--SRDRTTRLWAPDSPNRGFTEMHCMSGHS 65
Query: 442 GAVGAVAF--SKKL--QNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDI 497
V V S + + +G +DH I ++S D PM L ++ H +
Sbjct: 66 NFVSCVCIIPSSDIYPHGLIATGGNDHNICIFSLDS-------PMPLY---ILKGHKDTV 115
Query: 498 NSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGD 557
SL+ +L+ +GS D TA VW L D ++T +GH +W+V+ P +++T S D
Sbjct: 116 CSLSSGKFGTLL-SGSWDTTAKVW-LNDKC-MMTLQGHTAAVWAVKILPEQGLMLTGSAD 172
Query: 558 KTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYD 617
KTIK+W G C +TF GH V + L+ + +SC D ++ W + TGEC+ Y
Sbjct: 173 KTIKLWKA--GRCERTFSGHEDCVRGLAILSE-TEFLSCANDASIRRWQI-TGECLGVYY 228
Query: 618 KHEDKIWALAVGKKTEMFATGGSDALVNLW 647
H + I++++V F T D + +W
Sbjct: 229 GHTNYIYSISVFPNCRDFVTTAEDRSLRIW 258
Score = 160 (61.4 bits), Expect = 8.1e-07, Sum P(2) = 8.1e-07
Identities = 41/186 (22%), Positives = 85/186 (45%)
Query: 56 IEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPSGG 115
++G DT+ +L+ LL S +VW L+ KC+ + +GH + P G
Sbjct: 108 LKGHKDTVCSLSSGKFGTLL-SGSWDTTAKVW-LND-KCMMTLQGHTAAVWAVKILPEQG 164
Query: 116 LLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDL 175
L+ T AD+ + +W G C F GH+ V + +T+ S ++DA++R W +
Sbjct: 165 LMLTGSADKTIKLWKA--GRCERTFSGHEDCVRGLAILSETE---FLSCANDASIRRWQI 219
Query: 176 LAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYEMVEAV 235
+ C+ H + + S+++ + ++ D+ + +W + + + +P + +
Sbjct: 220 TGE-CLGVYYGHTNYIYSISVFPNCRDFVTTAEDRSLRIWKHGECAQTIRLPA-QSIWCC 277
Query: 236 CAIPPG 241
C + G
Sbjct: 278 CVLDNG 283
Score = 153 (58.9 bits), Expect = 4.5e-06, Sum P(2) = 4.5e-06
Identities = 44/145 (30%), Positives = 71/145 (48%)
Query: 115 GLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDK-SLLFSGSDDATVRVW 173
GL+AT G D + ++ +D + KGHK V S+ + K L SGS D T +VW
Sbjct: 83 GLIATGGNDHNICIFSLDSPMPLYILKGHKDTVCSL----SSGKFGTLLSGSWDTTAKVW 138
Query: 174 DLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYEMVE 233
L KC+ TL H + V ++ I + +++ DK + LW + C+ T +E +
Sbjct: 139 --LNDKCMMTLQGHTAAVWAVKILPEQGLMLTGSADKTIKLW--KAGRCERTFSGHE--D 192
Query: 234 AVCAIPPGSAFDSFLSSYNQQTIKK 258
V + S + FLS N +I++
Sbjct: 193 CVRGLAILSETE-FLSCANDASIRR 216
Score = 139 (54.0 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 34/102 (33%), Positives = 56/102 (54%)
Query: 369 LAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKI-LIVTGSKDNSVRLWD 427
+A N + ++ L S Y+L GH + V C+LSSGK +++GS D + ++W
Sbjct: 85 IATGGNDHNICIFSLDSPMPLYILKGHKDTV-----CSLSSGKFGTLLSGSWDTTAKVWL 139
Query: 428 SESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVW 469
++ C+ GH AV AV + Q +++GS+D TIK+W
Sbjct: 140 NDK--CMMTLQGHTAAVWAVKILPE-QGLMLTGSADKTIKLW 178
Score = 117 (46.2 bits), Expect = 1.1e-08, Sum P(3) = 1.1e-08
Identities = 44/158 (27%), Positives = 69/158 (43%)
Query: 92 LKCLRSWKGHDGPAIGMAC--HPSGGLLATAGADRKVLVWDVDG---GFCT-HYFKGHKG 145
L C S GH+ G+ C +P G ++ + DR +W D GF H GH
Sbjct: 10 LSC--SLPGHELDVRGLVCCLYPPGAFVSVS-RDRTTRLWAPDSPNRGFTEMHCMSGHSN 66
Query: 146 VVSSILFHPDTD---KSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGST 202
VS + P +D L+ +G +D + ++ L + + L H V S++ G T
Sbjct: 67 FVSCVCIIPSSDIYPHGLIATGGNDHNICIFSLDSPMPLYILKGHKDTVCSLSSGKFG-T 125
Query: 203 LISAGRDKVVNLWDLRDYSCKLTVPTYEM-VEAVCAIP 239
L+S D +W L D C +T+ + V AV +P
Sbjct: 126 LLSGSWDTTAKVW-LND-KCMMTLQGHTAAVWAVKILP 161
Score = 107 (42.7 bits), Expect = 1.1e-08, Sum P(3) = 1.1e-08
Identities = 41/155 (26%), Positives = 72/155 (46%)
Query: 413 LIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFD 472
L++TGS D +++LW + RC +GH V +A + + FL S ++D +I+ W
Sbjct: 165 LMLTGSADKTIKLWKA-GRC-ERTFSGHEDCVRGLAILSETE-FL-SCANDASIRRWQIT 220
Query: 473 GLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTF 532
G + V H I S++V PN T ++DR+ +W+ + T
Sbjct: 221 G-----------ECLGVYYGHTNYIYSISVFPNCRDFVTTAEDRSLRIWKHGECAQ--TI 267
Query: 533 RGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISD 567
R + IW +V+ AS D I++++ +D
Sbjct: 268 RLPAQSIWCCCVLDNGDIVVGAS-DGIIRVFTEAD 301
Score = 38 (18.4 bits), Expect = 1.1e-08, Sum P(3) = 1.1e-08
Identities = 6/10 (60%), Positives = 8/10 (80%)
Query: 563 WSISDGSCLK 572
WS+SDG +K
Sbjct: 367 WSVSDGRWIK 376
>UNIPROTKB|P54319 [details] [associations]
symbol:Plaa "Phospholipase A-2-activating protein"
species:10116 "Rattus norvegicus" [GO:0006954 "inflammatory
response" evidence=IEA] [GO:0016005 "phospholipase A2 activator
activity" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50176
PROSITE:PS50294 SMART:SM00320 RGD:621245 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 eggNOG:COG2319 GO:GO:0006954
GO:GO:0016005 GeneTree:ENSGT00550000074944 HOGENOM:HOG000174247
KO:K14018 InterPro:IPR015155 InterPro:IPR013535 Pfam:PF09070
Pfam:PF08324 PROSITE:PS51394 PROSITE:PS51396 CTD:9373
HOVERGEN:HBG008204 OMA:VSECCRF OrthoDB:EOG4DJJVW EMBL:AABR03040245
EMBL:U17901 IPI:IPI00562304 PIR:JC4239 RefSeq:NP_446318.3
UniGene:Rn.7441 ProteinModelPortal:P54319 MINT:MINT-4299720
STRING:P54319 PhosphoSite:P54319 PRIDE:P54319
Ensembl:ENSRNOT00000010621 GeneID:116645 KEGG:rno:116645
UCSC:RGD:621245 InParanoid:P54319 NextBio:619383
ArrayExpress:P54319 Genevestigator:P54319
GermOnline:ENSRNOG00000007753 Uniprot:P54319
Length = 795
Score = 290 (107.1 bits), Expect = 4.9e-22, P = 4.9e-22
Identities = 84/270 (31%), Positives = 130/270 (48%)
Query: 386 MSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLW--DSESRCCVGVG--TGHM 441
+SCS L GH V L C G + V S+D + RLW DS +R + +GH
Sbjct: 10 LSCS--LPGHELDVRGLVCCLYPPGAFVSV--SRDRTTRLWAPDSPNRGFTEMHCMSGHS 65
Query: 442 GAVGAVAF--SKKL--QNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDI 497
V V S + + +G +DH I ++S D PM L ++ H +
Sbjct: 66 NFVSCVCIIPSSDIYPHGLIATGGNDHNICIFSLDS-------PMPLY---ILKGHKDTV 115
Query: 498 NSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGD 557
SL+ +L+ +GS D TA VW L D ++T +GH +W+V+ P +++T S D
Sbjct: 116 CSLSSGKFGTLL-SGSWDTTAKVW-LNDKC-MMTLQGHTAAVWAVKILPEQGLMLTGSAD 172
Query: 558 KTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYD 617
KTIK+W G C +TF GH V + L+ + +SC D ++ W + TGEC+ Y
Sbjct: 173 KTIKLWKA--GRCERTFSGHEDCVRGLAILSE-TEFLSCANDASIRRWQI-TGECLGVYY 228
Query: 618 KHEDKIWALAVGKKTEMFATGGSDALVNLW 647
H + I++++V F T D + +W
Sbjct: 229 GHTNYIYSISVFPNCRDFVTTAEDRSLRIW 258
Score = 160 (61.4 bits), Expect = 8.1e-07, Sum P(2) = 8.1e-07
Identities = 41/186 (22%), Positives = 85/186 (45%)
Query: 56 IEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPSGG 115
++G DT+ +L+ LL S +VW L+ KC+ + +GH + P G
Sbjct: 108 LKGHKDTVCSLSSGKFGTLL-SGSWDTTAKVW-LND-KCMMTLQGHTAAVWAVKILPEQG 164
Query: 116 LLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDL 175
L+ T AD+ + +W G C F GH+ V + +T+ S ++DA++R W +
Sbjct: 165 LMLTGSADKTIKLWKA--GRCERTFSGHEDCVRGLAILSETE---FLSCANDASIRRWQI 219
Query: 176 LAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYEMVEAV 235
+ C+ H + + S+++ + ++ D+ + +W + + + +P + +
Sbjct: 220 TGE-CLGVYYGHTNYIYSISVFPNCRDFVTTAEDRSLRIWKHGECAQTIRLPA-QSIWCC 277
Query: 236 CAIPPG 241
C + G
Sbjct: 278 CVLDNG 283
Score = 153 (58.9 bits), Expect = 4.5e-06, Sum P(2) = 4.5e-06
Identities = 44/145 (30%), Positives = 71/145 (48%)
Query: 115 GLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDK-SLLFSGSDDATVRVW 173
GL+AT G D + ++ +D + KGHK V S+ + K L SGS D T +VW
Sbjct: 83 GLIATGGNDHNICIFSLDSPMPLYILKGHKDTVCSL----SSGKFGTLLSGSWDTTAKVW 138
Query: 174 DLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYEMVE 233
L KC+ TL H + V ++ I + +++ DK + LW + C+ T +E +
Sbjct: 139 --LNDKCMMTLQGHTAAVWAVKILPEQGLMLTGSADKTIKLW--KAGRCERTFSGHE--D 192
Query: 234 AVCAIPPGSAFDSFLSSYNQQTIKK 258
V + S + FLS N +I++
Sbjct: 193 CVRGLAILSETE-FLSCANDASIRR 216
Score = 139 (54.0 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 34/102 (33%), Positives = 56/102 (54%)
Query: 369 LAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKI-LIVTGSKDNSVRLWD 427
+A N + ++ L S Y+L GH + V C+LSSGK +++GS D + ++W
Sbjct: 85 IATGGNDHNICIFSLDSPMPLYILKGHKDTV-----CSLSSGKFGTLLSGSWDTTAKVWL 139
Query: 428 SESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVW 469
++ C+ GH AV AV + Q +++GS+D TIK+W
Sbjct: 140 NDK--CMMTLQGHTAAVWAVKILPE-QGLMLTGSADKTIKLW 178
Score = 117 (46.2 bits), Expect = 1.1e-08, Sum P(3) = 1.1e-08
Identities = 44/158 (27%), Positives = 69/158 (43%)
Query: 92 LKCLRSWKGHDGPAIGMAC--HPSGGLLATAGADRKVLVWDVDG---GFCT-HYFKGHKG 145
L C S GH+ G+ C +P G ++ + DR +W D GF H GH
Sbjct: 10 LSC--SLPGHELDVRGLVCCLYPPGAFVSVS-RDRTTRLWAPDSPNRGFTEMHCMSGHSN 66
Query: 146 VVSSILFHPDTD---KSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGST 202
VS + P +D L+ +G +D + ++ L + + L H V S++ G T
Sbjct: 67 FVSCVCIIPSSDIYPHGLIATGGNDHNICIFSLDSPMPLYILKGHKDTVCSLSSGKFG-T 125
Query: 203 LISAGRDKVVNLWDLRDYSCKLTVPTYEM-VEAVCAIP 239
L+S D +W L D C +T+ + V AV +P
Sbjct: 126 LLSGSWDTTAKVW-LND-KCMMTLQGHTAAVWAVKILP 161
Score = 107 (42.7 bits), Expect = 1.1e-08, Sum P(3) = 1.1e-08
Identities = 41/155 (26%), Positives = 72/155 (46%)
Query: 413 LIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFD 472
L++TGS D +++LW + RC +GH V +A + + FL S ++D +I+ W
Sbjct: 165 LMLTGSADKTIKLWKA-GRC-ERTFSGHEDCVRGLAILSETE-FL-SCANDASIRRWQIT 220
Query: 473 GLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTF 532
G + V H I S++V PN T ++DR+ +W+ + T
Sbjct: 221 G-----------ECLGVYYGHTNYIYSISVFPNCRDFVTTAEDRSLRIWKHGECAQ--TI 267
Query: 533 RGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISD 567
R + IW +V+ AS D I++++ +D
Sbjct: 268 RLPAQSIWCCCVLDNGDIVVGAS-DGIIRVFTEAD 301
Score = 38 (18.4 bits), Expect = 1.1e-08, Sum P(3) = 1.1e-08
Identities = 6/10 (60%), Positives = 8/10 (80%)
Query: 563 WSISDGSCLK 572
WS+SDG +K
Sbjct: 367 WSVSDGRWIK 376
>TAIR|locus:2097435 [details] [associations]
symbol:WDR5a "AT3G49660" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0007186 "G-protein coupled
receptor signaling pathway" evidence=ISS] [GO:0010228 "vegetative
to reproductive phase transition of meristem" evidence=IMP]
[GO:0042393 "histone binding" evidence=IDA] [GO:0048188
"Set1C/COMPASS complex" evidence=IPI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002686
GenomeReviews:BA000014_GR EMBL:AL132965 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0010228 GO:GO:0042393
GO:GO:0048188 HSSP:P16649 KO:K14963 HOGENOM:HOG000091642
OMA:KLWKSDT IPI:IPI00547190 PIR:T46032 RefSeq:NP_190535.1
UniGene:At.35578 ProteinModelPortal:Q9M2Z2 SMR:Q9M2Z2 PaxDb:Q9M2Z2
PRIDE:Q9M2Z2 EnsemblPlants:AT3G49660.1 GeneID:824128
KEGG:ath:AT3G49660 TAIR:At3g49660 InParanoid:Q9M2Z2
PhylomeDB:Q9M2Z2 ProtClustDB:CLSN2684254 Genevestigator:Q9M2Z2
Uniprot:Q9M2Z2
Length = 317
Score = 265 (98.3 bits), Expect = 6.1e-22, P = 6.1e-22
Identities = 78/311 (25%), Positives = 143/311 (45%)
Query: 346 SKRLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYV-----LAGHSEIVL 400
S+ L +N + +KF + + LA A+ + ++ Y +++++ GH +
Sbjct: 17 SQTLTSHNRAVSSVKF-SSDGRLLASASADKTIRTYTINTINDPIAEPVQEFTGHENGI- 74
Query: 401 CLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSG 460
A SS IV+ S D +++LWD E+ + GH V F+ + N +VSG
Sbjct: 75 --SDVAFSSDARFIVSASDDKTLKLWDVETGSLIKTLIGHTNYAFCVNFNPQ-SNMIVSG 131
Query: 461 SSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACV 520
S D T+++W D LK V+ AH + ++ + SL+ + S D +
Sbjct: 132 SFDETVRIW-------DVTTGKCLK---VLPAHSDPVTAVDFNRDGSLIVSSSYDGLCRI 181
Query: 521 WRLPDLVSVVTFRGHKRGIWS-VEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTS 579
W V T + S V FSP + ++ + D T+++W+IS LKT+ GH +
Sbjct: 182 WDSGTGHCVKTLIDDENPPVSFVRFSPNGKFILVGTLDNTLRLWNISSAKFLKTYTGHVN 241
Query: 580 S--VLRASF-LTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFA 636
+ + ++F +T G +IVS D V +W + + + + + H + + +A + A
Sbjct: 242 AQYCISSAFSVTNGKRIVSGSEDNCVHMWELNSKKLLQKLEGHTETVMNVACHPTENLIA 301
Query: 637 TGGSDALVNLW 647
+G D V +W
Sbjct: 302 SGSLDKTVRIW 312
Score = 257 (95.5 bits), Expect = 4.4e-21, P = 4.4e-21
Identities = 58/215 (26%), Positives = 100/215 (46%)
Query: 438 TGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDI 497
T H AV +V FS L S S+D TI+ ++ + ++D +P+ H I
Sbjct: 21 TSHNRAVSSVKFSSD-GRLLASASADKTIRTYTINTINDPIAEPVQ-----EFTGHENGI 74
Query: 498 NSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGD 557
+ +A + + + + S D+T +W + + T GH + V F+P ++++ S D
Sbjct: 75 SDVAFSSDARFIVSASDDKTLKLWDVETGSLIKTLIGHTNYAFCVNFNPQSNMIVSGSFD 134
Query: 558 KTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATY- 616
+T++IW ++ G CLK H+ V F G+ IVS DGL ++W TG C+ T
Sbjct: 135 ETVRIWDVTTGKCLKVLPAHSDPVTAVDFNRDGSLIVSSSYDGLCRIWDSGTGHCVKTLI 194
Query: 617 DKHEDKIWALAVGKKTEMFATGGSDALVNLWHDST 651
D + + + G D + LW+ S+
Sbjct: 195 DDENPPVSFVRFSPNGKFILVGTLDNTLRLWNISS 229
Score = 242 (90.2 bits), Expect = 1.8e-19, P = 1.8e-19
Identities = 67/291 (23%), Positives = 134/291 (46%)
Query: 319 LLCVTADQQLLLYTTVEVPEKKMELILSKRLVGYNEEILDLKFLGEEEQYLAVATNIEQV 378
L +AD+ + YT + + E + + G+ I D+ F + +++ A++ + +
Sbjct: 39 LASASADKTIRTYTINTINDPIAEPV--QEFTGHENGISDVAF-SSDARFIVSASDDKTL 95
Query: 379 QVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVGT 438
+++D+ + S L GH+ C++ S+ +IV+GS D +VR+WD + C+ V
Sbjct: 96 KLWDVETGSLIKTLIGHTNYAFCVNFNPQSN---MIVSGSFDETVRIWDVTTGKCLKVLP 152
Query: 439 GHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDIN 498
H V AV F++ + +VS S D ++W G K ++ ++
Sbjct: 153 AHSDPVTAVDFNRD-GSLIVSSSYDGLCRIWD-SGTGHCV--------KTLIDDENPPVS 202
Query: 499 SLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVE--FSPVD-QVVITAS 555
+ +PN + G+ D T +W + + T+ GH + + FS + + +++ S
Sbjct: 203 FVRFSPNGKFILVGTLDNTLRLWNISSAKFLKTYTGHVNAQYCISSAFSVTNGKRIVSGS 262
Query: 556 GDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWT 606
D + +W ++ L+ EGHT +V+ + I S D V++WT
Sbjct: 263 EDNCVHMWELNSKKLLQKLEGHTETVMNVACHPTENLIASGSLDKTVRIWT 313
Score = 234 (87.4 bits), Expect = 1.3e-18, P = 1.3e-18
Identities = 48/167 (28%), Positives = 83/167 (49%)
Query: 490 VAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRL-----PDLVSVVTFRGHKRGIWSVEF 544
+ +H + ++S+ + + L+ + S D+T + + P V F GH+ GI V F
Sbjct: 20 LTSHNRAVSSVKFSSDGRLLASASADKTIRTYTINTINDPIAEPVQEFTGHENGISDVAF 79
Query: 545 SPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKL 604
S + +++AS DKT+K+W + GS +KT GHT+ +F + IVS D V++
Sbjct: 80 SSDARFIVSASDDKTLKLWDVETGSLIKTLIGHTNYAFCVNFNPQSNMIVSGSFDETVRI 139
Query: 605 WTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLWHDST 651
W V TG+C+ H D + A+ + + + D L +W T
Sbjct: 140 WDVTTGKCLKVLPAHSDPVTAVDFNRDGSLIVSSSYDGLCRIWDSGT 186
Score = 210 (79.0 bits), Expect = 1.6e-14, P = 1.6e-14
Identities = 46/177 (25%), Positives = 88/177 (49%)
Query: 55 TIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTL-----KCLRSWKGHDGPAIGMA 109
T+ + ++++ S D +LL S+ + IR + ++T+ + ++ + GH+ +A
Sbjct: 19 TLTSHNRAVSSVKFSSDGRLLASASADKTIRTYTINTINDPIAEPVQEFTGHENGISDVA 78
Query: 110 CHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDAT 169
+ +A D+ + +WDV+ G GH + F+P ++ ++ SGS D T
Sbjct: 79 FSSDARFIVSASDDKTLKLWDVETGSLIKTLIGHTNYAFCVNFNPQSN--MIVSGSFDET 136
Query: 170 VRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTV 226
VR+WD+ KC+ L H VT++ DGS ++S+ D + +WD C T+
Sbjct: 137 VRIWDVTTGKCLKVLPAHSDPVTAVDFNRDGSLIVSSSYDGLCRIWDSGTGHCVKTL 193
Score = 202 (76.2 bits), Expect = 1.6e-13, P = 1.6e-13
Identities = 51/197 (25%), Positives = 91/197 (46%)
Query: 28 SSDGSFIACACGE------SINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHS 81
SSDG +A A + +IN ++ A G + I+ +A S D + + S+
Sbjct: 33 SSDGRLLASASADKTIRTYTINTINDPIAEPVQEFTGHENGISDVAFSSDARFIVSASDD 92
Query: 82 REIRVWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFK 141
+ +++WD+ T +++ GH A + +P ++ + D V +WDV G C
Sbjct: 93 KTLKLWDVETGSLIKTLIGHTNYAFCVNFNPQSNMIVSGSFDETVRIWDVTTGKCLKVLP 152
Query: 142 GHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATL-DKHFSRVTSMAITSDG 200
H V+++ F+ D SL+ S S D R+WD CV TL D V+ + + +G
Sbjct: 153 AHSDPVTAVDFN--RDGSLIVSSSYDGLCRIWDSGTGHCVKTLIDDENPPVSFVRFSPNG 210
Query: 201 STLISAGRDKVVNLWDL 217
++ D + LW++
Sbjct: 211 KFILVGTLDNTLRLWNI 227
Score = 186 (70.5 bits), Expect = 1.2e-11, P = 1.2e-11
Identities = 45/180 (25%), Positives = 82/180 (45%)
Query: 40 ESINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWK 99
E++ I D++ + SD +TA+ + D L+ SS + R+WD T C+++
Sbjct: 135 ETVRIWDVTTGKCLKVLPAHSDPVTAVDFNRDGSLIVSSSYDGLCRIWDSGTGHCVKTLI 194
Query: 100 GHDGPAIGMA-CHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGV---VSSILFHPD 155
+ P + P+G + D + +W++ + GH +SS F
Sbjct: 195 DDENPPVSFVRFSPNGKFILVGTLDNTLRLWNISSAKFLKTYTGHVNAQYCISSA-FSVT 253
Query: 156 TDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLW 215
K ++ SGS+D V +W+L +KK + L+ H V ++A + + S DK V +W
Sbjct: 254 NGKRIV-SGSEDNCVHMWELNSKKLLQKLEGHTETVMNVACHPTENLIASGSLDKTVRIW 312
Score = 157 (60.3 bits), Expect = 2.5e-08, P = 2.5e-08
Identities = 65/302 (21%), Positives = 132/302 (43%)
Query: 183 TLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYEMVEAVCAIPPGS 242
TL H V+S+ +SDG L SA DK + + + + P E V+ G
Sbjct: 19 TLTSHNRAVSSVKFSSDGRLLASASADKTIRTYTINT----INDPIAEPVQEFTGHENGI 74
Query: 243 AFDSFLSSYNQQTIKKKRRSLEIHFITVGERGIVRMWNADSA-CLYEQKSSDVTISFEMD 301
+ +F S ++L++ + G + + + A C+ S++ +S D
Sbjct: 75 SDVAFSSDARFIVSASDDKTLKLWDVETGSLIKTLIGHTNYAFCVNFNPQSNMIVSGSFD 134
Query: 302 DSKRGFTAAT-----VLPSNQGLLCVT---ADQQLLLYTTVE----VPEKKMELILSKRL 349
++ R + T VLP++ + D L++ ++ + + + + +
Sbjct: 135 ETVRIWDVTTGKCLKVLPAHSDPVTAVDFNRDGSLIVSSSYDGLCRIWDSGTGHCVKTLI 194
Query: 350 VGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTC-ALS 408
N + ++F +++ V T ++++++SS GH C+ + +++
Sbjct: 195 DDENPPVSFVRF-SPNGKFILVGTLDNTLRLWNISSAKFLKTYTGHVNAQYCISSAFSVT 253
Query: 409 SGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKV 468
+GK IV+GS+DN V +W+ S+ + GH V VA +N + SGS D T+++
Sbjct: 254 NGK-RIVSGSEDNCVHMWELNSKKLLQKLEGHTETVMNVA-CHPTENLIASGSLDKTVRI 311
Query: 469 WS 470
W+
Sbjct: 312 WT 313
Score = 137 (53.3 bits), Expect = 4.5e-06, P = 4.5e-06
Identities = 39/145 (26%), Positives = 67/145 (46%)
Query: 114 GGLLATAGADRKVLVWDVDG-----GFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDA 168
G LLA+A AD+ + + ++ F GH+ +S + F +D + S SDD
Sbjct: 36 GRLLASASADKTIRTYTINTINDPIAEPVQEFTGHENGISDVAF--SSDARFIVSASDDK 93
Query: 169 TVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPT 228
T+++WD+ + TL H + + + ++S D+ V +WD+ C +P
Sbjct: 94 TLKLWDVETGSLIKTLIGHTNYAFCVNFNPQSNMIVSGSFDETVRIWDVTTGKCLKVLPA 153
Query: 229 Y-EMVEAVCAIPPGSAFDSFLSSYN 252
+ + V AV GS S SSY+
Sbjct: 154 HSDPVTAVDFNRDGSLIVS--SSYD 176
Score = 116 (45.9 bits), Expect = 0.00096, P = 0.00096
Identities = 27/106 (25%), Positives = 52/106 (49%)
Query: 28 SSDGSFIACAC-GESINIVDLSNASIKSTIEG--GSDTITALALS-PDDKLLFSSGHSRE 83
S +G FI ++ + ++S+A T G + + A S + K + S
Sbjct: 207 SPNGKFILVGTLDNTLRLWNISSAKFLKTYTGHVNAQYCISSAFSVTNGKRIVSGSEDNC 266
Query: 84 IRVWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVW 129
+ +W+L++ K L+ +GH + +ACHP+ L+A+ D+ V +W
Sbjct: 267 VHMWELNSKKLLQKLEGHTETVMNVACHPTENLIASGSLDKTVRIW 312
>MGI|MGI:104810 [details] [associations]
symbol:Plaa "phospholipase A2, activating protein"
species:10090 "Mus musculus" [GO:0005515 "protein binding"
evidence=IPI] [GO:0006954 "inflammatory response" evidence=IDA]
[GO:0016005 "phospholipase A2 activator activity" evidence=IDA]
[GO:0043085 "positive regulation of catalytic activity"
evidence=IDA] [GO:0070062 "extracellular vesicular exosome"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50176
PROSITE:PS50294 SMART:SM00320 MGI:MGI:104810 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 eggNOG:COG2319 GO:GO:0006954
GO:GO:0016005 EMBL:CH466527 GeneTree:ENSGT00550000074944
HOGENOM:HOG000174247 KO:K14018 InterPro:IPR015155
InterPro:IPR013535 Pfam:PF09070 Pfam:PF08324 PROSITE:PS51394
PROSITE:PS51396 EMBL:AL732597 CTD:9373 HOVERGEN:HBG008204
OMA:VSECCRF OrthoDB:EOG4DJJVW ChiTaRS:PLAA EMBL:AK075934
EMBL:BC139355 EMBL:BC139356 EMBL:BC139773 EMBL:M57958
IPI:IPI00226234 PIR:A40963 RefSeq:NP_766283.2 UniGene:Mm.22724
UniGene:Mm.490101 ProteinModelPortal:P27612 SMR:P27612
MINT:MINT-220705 STRING:P27612 PhosphoSite:P27612 PaxDb:P27612
PRIDE:P27612 Ensembl:ENSMUST00000107107 GeneID:18786 KEGG:mmu:18786
InParanoid:A4QPD6 NextBio:295052 Bgee:P27612 CleanEx:MM_PLAA
Genevestigator:P27612 GermOnline:ENSMUSG00000028577 Uniprot:P27612
Length = 794
Score = 289 (106.8 bits), Expect = 6.3e-22, P = 6.3e-22
Identities = 84/270 (31%), Positives = 132/270 (48%)
Query: 386 MSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLW--DSESRCCVGVG--TGHM 441
+SCS L GH V L C G + V S+D + RLW DS +R + +GH
Sbjct: 10 LSCS--LPGHELDVRGLVCCLYPPGAFVSV--SRDRTTRLWAPDSPNRGFTEMHCMSGHS 65
Query: 442 GAVGAVAF--SKKL--QNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDI 497
V V S + + +G +DH I ++S D PM L ++ H +
Sbjct: 66 NFVSCVCIIPSSDIYPHGLIATGGNDHNICIFSLDS-------PMPLY---ILKGHKDTV 115
Query: 498 NSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGD 557
SL+ +L+ +GS D TA VW L D ++T +GH +W+V+ P +++T S D
Sbjct: 116 CSLSSGKFGTLL-SGSWDTTAKVW-LNDKC-MMTLQGHTAAVWAVKILPEQGLMLTGSAD 172
Query: 558 KTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYD 617
KTIK+W G C +TF GH V + L+ + +SC D ++ W + TGEC+ Y
Sbjct: 173 KTIKLWKA--GRCERTFLGHEDCVRGLAILSE-TEFLSCANDASIRRWQI-TGECLEVYF 228
Query: 618 KHEDKIWALAVGKKTEMFATGGSDALVNLW 647
H + I++++V ++ F T D + +W
Sbjct: 229 GHTNYIYSISVFPNSKDFVTTAEDRSLRIW 258
Score = 161 (61.7 bits), Expect = 6.3e-07, Sum P(2) = 6.3e-07
Identities = 41/186 (22%), Positives = 85/186 (45%)
Query: 56 IEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPSGG 115
++G DT+ +L+ LL S +VW L+ KC+ + +GH + P G
Sbjct: 108 LKGHKDTVCSLSSGKFGTLL-SGSWDTTAKVW-LND-KCMMTLQGHTAAVWAVKILPEQG 164
Query: 116 LLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDL 175
L+ T AD+ + +W G C F GH+ V + +T+ S ++DA++R W +
Sbjct: 165 LMLTGSADKTIKLWKA--GRCERTFLGHEDCVRGLAILSETE---FLSCANDASIRRWQI 219
Query: 176 LAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYEMVEAV 235
+ C+ H + + S+++ + ++ D+ + +W + + + +P + +
Sbjct: 220 TGE-CLEVYFGHTNYIYSISVFPNSKDFVTTAEDRSLRIWKHGECAQTIRLPA-QSIWCC 277
Query: 236 CAIPPG 241
C + G
Sbjct: 278 CVLENG 283
Score = 155 (59.6 bits), Expect = 2.7e-06, Sum P(2) = 2.7e-06
Identities = 47/157 (29%), Positives = 77/157 (49%)
Query: 115 GLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDK-SLLFSGSDDATVRVW 173
GL+AT G D + ++ +D + KGHK V S+ + K L SGS D T +VW
Sbjct: 83 GLIATGGNDHNICIFSLDSPMPLYILKGHKDTVCSL----SSGKFGTLLSGSWDTTAKVW 138
Query: 174 DLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYEMVE 233
L KC+ TL H + V ++ I + +++ DK + LW + C+ T +E +
Sbjct: 139 --LNDKCMMTLQGHTAAVWAVKILPEQGLMLTGSADKTIKLW--KAGRCERTFLGHE--D 192
Query: 234 AVCAIPPGSAFDSFLSSYNQQTIKKKR---RSLEIHF 267
V + S + FLS N +I++ + LE++F
Sbjct: 193 CVRGLAILSETE-FLSCANDASIRRWQITGECLEVYF 228
Score = 139 (54.0 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 34/102 (33%), Positives = 56/102 (54%)
Query: 369 LAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKI-LIVTGSKDNSVRLWD 427
+A N + ++ L S Y+L GH + V C+LSSGK +++GS D + ++W
Sbjct: 85 IATGGNDHNICIFSLDSPMPLYILKGHKDTV-----CSLSSGKFGTLLSGSWDTTAKVWL 139
Query: 428 SESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVW 469
++ C+ GH AV AV + Q +++GS+D TIK+W
Sbjct: 140 NDK--CMMTLQGHTAAVWAVKILPE-QGLMLTGSADKTIKLW 178
Score = 117 (46.2 bits), Expect = 1.1e-08, Sum P(3) = 1.1e-08
Identities = 44/158 (27%), Positives = 69/158 (43%)
Query: 92 LKCLRSWKGHDGPAIGMAC--HPSGGLLATAGADRKVLVWDVDG---GFCT-HYFKGHKG 145
L C S GH+ G+ C +P G ++ + DR +W D GF H GH
Sbjct: 10 LSC--SLPGHELDVRGLVCCLYPPGAFVSVS-RDRTTRLWAPDSPNRGFTEMHCMSGHSN 66
Query: 146 VVSSILFHPDTD---KSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGST 202
VS + P +D L+ +G +D + ++ L + + L H V S++ G T
Sbjct: 67 FVSCVCIIPSSDIYPHGLIATGGNDHNICIFSLDSPMPLYILKGHKDTVCSLSSGKFG-T 125
Query: 203 LISAGRDKVVNLWDLRDYSCKLTVPTYEM-VEAVCAIP 239
L+S D +W L D C +T+ + V AV +P
Sbjct: 126 LLSGSWDTTAKVW-LND-KCMMTLQGHTAAVWAVKILP 161
Score = 107 (42.7 bits), Expect = 1.1e-08, Sum P(3) = 1.1e-08
Identities = 41/155 (26%), Positives = 71/155 (45%)
Query: 413 LIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFD 472
L++TGS D +++LW + RC GH V +A + + FL S ++D +I+ W
Sbjct: 165 LMLTGSADKTIKLWKA-GRC-ERTFLGHEDCVRGLAILSETE-FL-SCANDASIRRWQIT 220
Query: 473 GLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTF 532
G + V H I S++V PN T ++DR+ +W+ + T
Sbjct: 221 G-----------ECLEVYFGHTNYIYSISVFPNSKDFVTTAEDRSLRIWKHGECAQ--TI 267
Query: 533 RGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISD 567
R + IW +V+ AS D I++++ S+
Sbjct: 268 RLPAQSIWCCCVLENGDIVVGAS-DGIIRVFTESE 301
Score = 38 (18.4 bits), Expect = 1.1e-08, Sum P(3) = 1.1e-08
Identities = 6/10 (60%), Positives = 8/10 (80%)
Query: 563 WSISDGSCLK 572
WS+SDG +K
Sbjct: 367 WSVSDGRWIK 376
>FB|FBgn0038597 [details] [associations]
symbol:CG8064 species:7227 "Drosophila melanogaster"
[GO:0022008 "neurogenesis" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:AE014297 GO:GO:0022008
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
HSSP:P16649 InterPro:IPR007148 Pfam:PF04003
GeneTree:ENSGT00550000074925 KO:K14556 OMA:SIFAHDD EMBL:AY047497
RefSeq:NP_650705.1 UniGene:Dm.4684 SMR:Q9VE98 MINT:MINT-1586038
STRING:Q9VE98 EnsemblMetazoa:FBtr0083574 GeneID:42196
KEGG:dme:Dmel_CG8064 UCSC:CG8064-RA FlyBase:FBgn0038597
InParanoid:Q9VE98 OrthoDB:EOG4KWH7Q ChiTaRS:CG8064 GenomeRNAi:42196
NextBio:827621 Uniprot:Q9VE98
Length = 922
Score = 290 (107.1 bits), Expect = 6.5e-22, P = 6.5e-22
Identities = 149/657 (22%), Positives = 268/657 (40%)
Query: 25 LVVSSDGSFIACACGES-INIVDLSNASIKS---TIEGGSDTITALALSPDDKLLFSSGH 80
L VS D IA + + I DLS+ T+ + ++ L L S G
Sbjct: 71 LRVSPDHLHIAVGYADGMVQIFDLSSDRYYDPICTLALHKNAVSILRYDLQGMRLVSGGL 130
Query: 81 SREIRVWDLSTLKCLRSWKGHDGPAIGMACH-----PSGGLLATAGADRKVLVWDVDGGF 135
E+ V D+ GH+ AI A H ++ + D ++ W+++ F
Sbjct: 131 DTELVVVDVVEQAGRARLSGHNA-AITDA-HFLQRLVDESIVVSCSKDTQIKFWNLETQF 188
Query: 136 CTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMA 195
C ++ V ++ F + L+ +G+ ++ + V+ L K A + S V ++
Sbjct: 189 CFKTIVDNRTEVWALAFIGN----LMVAGAGESGMNVYRL-RKHDGAITETLESAVEGLS 243
Query: 196 I----------TSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYEMVEAVCAIPPGSAFD 245
I S+ T+ AG+ + VNL +T P+ ++ C +
Sbjct: 244 IDDEDTISPISVSNCGTIQRAGKGRTVNL---------VTDPSERVIS--CH-GTNDLIE 291
Query: 246 SFLSSYNQQTIKKKRRSLEIHFITVGERGIVRMWNADSACLY-EQKSSDVTISFEMDDSK 304
+F + K+ + L+ E+ + +D A L EQ SD E +K
Sbjct: 292 NFYICTPDEVKKRLAKRLK------KEKKVAEDEGSDEAKLSTEQSLSDEIKRLESIRAK 345
Query: 305 RGFTAA-TVLPSNQGL--LCVTADQQLLLYT------TVEVPEKKMELILSKRLVGYNEE 355
+ + VL NQ L L A+ L LY+ T + + +L+ S +G+ E
Sbjct: 346 QKIKSIDVVLGQNQELRVLVSLANNSLCLYSLEASIKTRKATDPSAKLLRSLTRLGHQSE 405
Query: 356 ILDLKFLGEEEQYLAVATNI-EQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILI 414
+ + F + LA+ + E + +D +M C + ++ +LC G +
Sbjct: 406 VRSVCFSNDS---LAIGSGAGESFKFWDRDAMQCLRTVP--TDYILC---SKFVPGDRYV 457
Query: 415 VTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGL 474
+ G K + + D + V H G + ++A Q V+GS D T+K+W+F+ L
Sbjct: 458 LLGMKSGKLLIVDVAAADIVEEIPAHEGELWSIAILPD-QKGCVTGSGDTTVKIWTFE-L 515
Query: 475 SDDAEQPMNLKAKAVVAAHGKDINS----LAVAPNDSLVCTGSQDRTACVWRLPDLVSVV 530
D E K +++ + + LAV+P+ + G D T V+ L +
Sbjct: 516 IDAGEGAAQTKVLSLLHKNTLKLEETVLCLAVSPDMKYLAVGLLDATVKVFFLDTFKFYL 575
Query: 531 TFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRG 590
+ GHK + ++ S +++T S D+ +K+W ++ G C ++ H SV+ F+ R
Sbjct: 576 SLYGHKLPVICLDISYDSNLIVTGSADRNVKVWGLNFGDCHRSIFAHDDSVMSVQFIPRT 635
Query: 591 AQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLW 647
+CG DG VK W E I T H + + L+V T GSD + ++
Sbjct: 636 HMFFTCGKDGKVKQWDGDNFEKILTLPGHIGEAYCLSVSPNGRYLVTCGSDRTLRMF 692
Score = 229 (85.7 bits), Expect = 2.8e-15, P = 2.8e-15
Identities = 140/658 (21%), Positives = 280/658 (42%)
Query: 25 LVVSSDGSFIACACGESINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSRE- 83
+V ++G ++A E++ + DL K T+ +T+L +SPD L + G++
Sbjct: 30 VVDKTEGRYVAAPAAENVIVWDLRMGDRKLTLRREKFEVTSLRVSPDH-LHIAVGYADGM 88
Query: 84 IRVWDLSTLKC---LRSWKGHDGPAIGMACHPSGGL-LATAGADRKVLVWDVDGGFCTHY 139
++++DLS+ + + + H A+ + + G+ L + G D +++V DV
Sbjct: 89 VQIFDLSSDRYYDPICTLALHKN-AVSILRYDLQGMRLVSGGLDTELVVVDVVEQAGRAR 147
Query: 140 FKGHKGVVSSILFHPD-TDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITS 198
GH ++ F D+S++ S S D ++ W+L + C T+ + + V ++A
Sbjct: 148 LSGHNAAITDAHFLQRLVDESIVVSCSKDTQIKFWNLETQFCFKTIVDNRTEVWALAFI- 206
Query: 199 DGSTLISAGRDKVVNLWDLRDYSCKLTVPTYEMVEAVCAIPPGSAFDSFLSSYNQQTIKK 258
G+ +++ + +N++ LR + +T VE + +I S +S N TI++
Sbjct: 207 -GNLMVAGAGESGMNVYRLRKHDGAITETLESAVEGL-SIDDEDTI-SPISVSNCGTIQR 263
Query: 259 KRRSLEIHFITVGERGIVRMWNADSACLYEQKSSDVTISFEM---DDSKRGFTAATVLPS 315
+ ++ +T ++ +C ++D+ +F + D+ K+ A L
Sbjct: 264 AGKGRTVNLVTDPSERVI-------SC---HGTNDLIENFYICTPDEVKKRL--AKRLKK 311
Query: 316 NQGLLCVTADQQLLLYTTVEVPE--KKMELILSKR-------LVGYNEEILDLKFLGEEE 366
+ + + L T + + K++E I +K+ ++G N+E+ L L
Sbjct: 312 EKKVAEDEGSDEAKLSTEQSLSDEIKRLESIRAKQKIKSIDVVLGQNQELRVLVSLANNS 371
Query: 367 QYL-AVATNIEQVQVYDLSS-MSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVR 424
L ++ +I+ + D S+ + S GH V + C S+ + I +G+ + S +
Sbjct: 372 LCLYSLEASIKTRKATDPSAKLLRSLTRLGHQSEVRSV--C-FSNDSLAIGSGAGE-SFK 427
Query: 425 LWDSESRCCVG-VGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMN 483
WD ++ C+ V T ++ V + + + SG K+ D + D +
Sbjct: 428 FWDRDAMQCLRTVPTDYILCSKFVPGDRYVLLGMKSG------KLLIVDVAAADIVEE-- 479
Query: 484 LKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSV--------VTFRGH 535
+ AH ++ S+A+ P+ TGS D T +W +L+ V H
Sbjct: 480 ------IPAHEGELWSIAILPDQKGCVTGSGDTTVKIWTF-ELIDAGEGAAQTKVLSLLH 532
Query: 536 KRGIWSVE------FSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTR 589
K + E SP + + D T+K++ + + GH V+
Sbjct: 533 KNTLKLEETVLCLAVSPDMKYLAVGLLDATVKVFFLDTFKFYLSLYGHKLPVICLDISYD 592
Query: 590 GAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLW 647
IV+ AD VK+W + G+C + H+D + ++ +T MF T G D V W
Sbjct: 593 SNLIVTGSADRNVKVWGLNFGDCHRSIFAHDDSVMSVQFIPRTHMFFTCGKDGKVKQW 650
Score = 184 (69.8 bits), Expect = 2.1e-10, P = 2.1e-10
Identities = 48/167 (28%), Positives = 79/167 (47%)
Query: 53 KSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHP 112
K+T++ +T+ LA+SPD K L ++V+ L T K S GH P I +
Sbjct: 533 KNTLKL-EETVLCLAVSPDMKYLAVGLLDATVKVFFLDTFKFYLSLYGHKLPVICLDISY 591
Query: 113 SGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRV 172
L+ T ADR V VW ++ G C H V S+ F P T + F+ D V+
Sbjct: 592 DSNLIVTGSADRNVKVWGLNFGDCHRSIFAHDDSVMSVQFIPRTH--MFFTCGKDGKVKQ 649
Query: 173 WDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRD 219
WD + + TL H ++++ +G L++ G D+ + +++ D
Sbjct: 650 WDGDNFEKILTLPGHIGEAYCLSVSPNGRYLVTCGSDRTLRMFERTD 696
>UNIPROTKB|J9JHP3 [details] [associations]
symbol:APAF1 "Apoptotic protease-activating factor 1"
species:9615 "Canis lupus familiaris" [GO:0043531 "ADP binding"
evidence=IEA] [GO:0042981 "regulation of apoptotic process"
evidence=IEA] [GO:0006952 "defense response" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] InterPro:IPR017986
InterPro:IPR000767 InterPro:IPR001315 InterPro:IPR001680
InterPro:IPR002182 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00619
Pfam:PF00931 PRINTS:PR00364 PROSITE:PS50082 PROSITE:PS50209
PROSITE:PS50294 SMART:SM00320 GO:GO:0006952 GO:GO:0042981
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043531
GO:GO:0005622 Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986
GeneTree:ENSGT00700000104017 EMBL:AAEX03009966
Ensembl:ENSCAFT00000044849 Uniprot:J9JHP3
Length = 1215
Score = 184 (69.8 bits), Expect = 6.8e-22, Sum P(2) = 6.8e-22
Identities = 51/207 (24%), Positives = 87/207 (42%)
Query: 12 CEPVLQQFYGGGPLVVSSDGSFIACACGESINIVDLSNASIKSTIEGGSDTITALALSPD 71
CEP + Y L + E IN ++ N S + + +D + S D
Sbjct: 577 CEPETSEVYQQAKLQAKQEVDH-GMLYLEWINKKNIKNLS-RLVVRPHTDAVYHACFSED 634
Query: 72 DKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDV 131
+ + S G + ++V+ T + L K H+ + A +AT D+KV +W+
Sbjct: 635 GQRIASCGVDKTLQVFKAETGEKLLEIKAHEDEVLCCAFSTDDRFIATCSVDKKVKIWNS 694
Query: 132 DGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRV 191
G H + H V+ F ++ LL + S D +++WDL K+C T+ H + V
Sbjct: 695 MTGGLVHVYDEHSEQVNCCHFTNNSHYLLLATASSDCFLKLWDLNQKECRNTMFGHTNSV 754
Query: 192 TSMAITSDGSTLISAGRDKVVNLWDLR 218
+ D L S D + LWD++
Sbjct: 755 NHCRFSPDDKLLASCSADGTLKLWDVK 781
Score = 178 (67.7 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 58/244 (23%), Positives = 116/244 (47%)
Query: 325 DQQLLLYTTVEVPEKKMELILSKRLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLS 384
D+ L ++ E EK +E+ + +E+L F +++++A + ++V++++
Sbjct: 644 DKTLQVFKA-ETGEKLLEI------KAHEDEVLCCAF-STDDRFIATCSVDKKVKIWNSM 695
Query: 385 SMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAV 444
+ +V HSE V C +S +L+ T S D ++LWD + C GH +V
Sbjct: 696 TGGLVHVYDEHSEQVNCCHFTN-NSHYLLLATASSDCFLKLWDLNQKECRNTMFGHTNSV 754
Query: 445 GAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAV-- 502
FS L S S+D T+K+W D S + + +N+K + + ++ + V
Sbjct: 755 NHCRFSPD-DKLLASCSADGTLKLW--DVKSANERKSINVKQFFLNSEEPQEDMEVIVKC 811
Query: 503 ---APNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKT 559
+ + + + ++++ +W + + V RGH + V FSP +T+S D+T
Sbjct: 812 CSWSADGTRIMVAAKNKIF-LWNMDSCLKVADCRGHLSWVHCVMFSPDGSSFLTSSDDQT 870
Query: 560 IKIW 563
I++W
Sbjct: 871 IRLW 874
Score = 163 (62.4 bits), Expect = 6.8e-22, Sum P(2) = 6.8e-22
Identities = 79/292 (27%), Positives = 126/292 (43%)
Query: 339 KKMELILSKR-LVGYNEEI-LDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHS 396
K+++LI K + Y E + L QY+A V++ +L + GH
Sbjct: 909 KRLQLINGKTGQIDYLIEAQVSCCCLSPHLQYIAFGGEDGAVEILELLNNRIFQSRIGHK 968
Query: 397 EIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNF 456
+ V + GK LI + S D+S+++W+ +S V + H V K +
Sbjct: 969 KTVRHIQFT--DDGKTLI-SSSDDSSIQVWNWQSEEYVFL-QAHQETVKDFKLLKNSK-- 1022
Query: 457 LVSGSSDHTIK-VWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQD 515
L+S S D T+K +WS ++ E+ H + S ++P+ + + S D
Sbjct: 1023 LLSWSFDGTVKKIWSI--ITGRIEKDF--------VCHQDTVLSCDISPDATKFSSTSAD 1072
Query: 516 RTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKT--IKIWSISDGSCLKT 573
+TA +W L + RGHK + FS VD ++ A+GD I+IW++S+G L
Sbjct: 1073 KTAKIWSFELLSPLHELRGHKGCVRCSVFS-VDSTLL-ATGDDNGEIRIWNVSNGELLHL 1130
Query: 574 F------EG---HTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATY 616
EG H V F +VS G G +K W V TGE T+
Sbjct: 1131 CAPILVEEGAATHGGWVTDLCFSPDSKMLVSAG--GYLKWWNVVTGESSQTF 1180
Score = 157 (60.3 bits), Expect = 2.4e-07, P = 2.4e-07
Identities = 46/172 (26%), Positives = 77/172 (44%)
Query: 440 HMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINS 499
H AV FS+ Q + S D T++V+ ++ E+ + +KA H ++
Sbjct: 622 HTDAVYHACFSEDGQR-IASCGVDKTLQVFK----AETGEKLLEIKA------HEDEVLC 670
Query: 500 LAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVI--TASGD 557
A + +D + T S D+ +W V + H + F+ ++ TAS D
Sbjct: 671 CAFSTDDRFIATCSVDKKVKIWNSMTGGLVHVYDEHSEQVNCCHFTNNSHYLLLATASSD 730
Query: 558 KTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRT 609
+K+W ++ C T GHT+SV F + SC ADG +KLW V++
Sbjct: 731 CFLKLWDLNQKECRNTMFGHTNSVNHCRFSPDDKLLASCSADGTLKLWDVKS 782
Score = 147 (56.8 bits), Expect = 2.9e-06, P = 2.9e-06
Identities = 33/123 (26%), Positives = 55/123 (44%)
Query: 527 VSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASF 586
+S + R H ++ FS Q + + DKT++++ G L + H VL +F
Sbjct: 614 LSRLVVRPHTDAVYHACFSEDGQRIASCGVDKTLQVFKAETGEKLLEIKAHEDEVLCCAF 673
Query: 587 LTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTE--MFATGGSDALV 644
T I +C D VK+W TG + YD+H +++ + + AT SD +
Sbjct: 674 STDDRFIATCSVDKKVKIWNSMTGGLVHVYDEHSEQVNCCHFTNNSHYLLLATASSDCFL 733
Query: 645 NLW 647
LW
Sbjct: 734 KLW 736
Score = 141 (54.7 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 69/293 (23%), Positives = 122/293 (41%)
Query: 329 LLYTTVEVPEKKMELILSKRLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSC 388
+LY +E KK LS+ +V + + + E+ Q +A + +QV+ +
Sbjct: 600 MLY--LEWINKKNIKNLSRLVVRPHTDAVYHACFSEDGQRIASCGVDKTLQVFKAETGEK 657
Query: 389 SYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVA 448
+ H + VLC CA S+ I T S D V++W+S + V V H V
Sbjct: 658 LLEIKAHEDEVLC---CAFSTDDRFIATCSVDKKVKIWNSMTGGLVHVYDEHSEQVNCCH 714
Query: 449 FSKKLQNFLVS-GSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDS 507
F+ L++ SSD +K+W D Q + + + H +N +P+D
Sbjct: 715 FTNNSHYLLLATASSDCFLKLW-------DLNQK---ECRNTMFGHTNSVNHCRFSPDDK 764
Query: 508 LVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVI-----TASGDKTI-- 560
L+ + S D T +W + + + + S E +V++ +A G + +
Sbjct: 765 LLASCSADGTLKLWDVKSANERKSINVKQFFLNSEEPQEDMEVIVKCCSWSADGTRIMVA 824
Query: 561 ---KIWSISDGSCLKTFE--GHTSSVLRASFLTRGAQIVSCGADGLVKLWTVR 608
KI+ + SCLK + GH S V F G+ ++ D ++LW +
Sbjct: 825 AKNKIFLWNMDSCLKVADCRGHLSWVHCVMFSPDGSSFLTSSDDQTIRLWETK 877
Score = 137 (53.3 bits), Expect = 3.5e-05, P = 3.5e-05
Identities = 38/161 (23%), Positives = 68/161 (42%)
Query: 56 IEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPSGG 115
++ +T+ L + KLL S ++W + T + + + H + P
Sbjct: 1005 LQAHQETVKDFKLLKNSKLLSWSFDGTVKKIWSIITGRIEKDFVCHQDTVLSCDISPDAT 1064
Query: 116 LLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDL 175
++ AD+ +W + H +GHKG V +F D +LL +G D+ +R+W++
Sbjct: 1065 KFSSTSADKTAKIWSFELLSPLHELRGHKGCVRCSVF--SVDSTLLATGDDNGEIRIWNV 1122
Query: 176 ----LAKKCVATLDK-----HFSRVTSMAITSDGSTLISAG 207
L C L + H VT + + D L+SAG
Sbjct: 1123 SNGELLHLCAPILVEEGAATHGGWVTDLCFSPDSKMLVSAG 1163
Score = 134 (52.2 bits), Expect = 1.3e-16, Sum P(2) = 1.3e-16
Identities = 41/151 (27%), Positives = 69/151 (45%)
Query: 42 INIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRS---- 97
+ + DL+ ++T+ G ++++ SPDDKLL S +++WD+ + +S
Sbjct: 733 LKLWDLNQKECRNTMFGHTNSVNHCRFSPDDKLLASCSADGTLKLWDVKSANERKSINVK 792
Query: 98 --WKGHDGPAIGM-----ACHPSG-GLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSS 149
+ + P M C S G A K+ +W++D +GH V
Sbjct: 793 QFFLNSEEPQEDMEVIVKCCSWSADGTRIMVAAKNKIFLWNMDSCLKVADCRGHLSWVHC 852
Query: 150 ILFHPDTDKSLLFSGSDDATVRVWDLLAKKC 180
++F PD S L S SDD T+R+W+ K C
Sbjct: 853 VMFSPD-GSSFLTS-SDDQTIRLWET-KKVC 880
Score = 107 (42.7 bits), Expect = 4.6e-16, Sum P(2) = 4.6e-16
Identities = 43/175 (24%), Positives = 73/175 (41%)
Query: 469 WSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVS 528
WSFDG + + + H + S ++P+ + + S D+TA +W L
Sbjct: 1026 WSFDGTVKKIWSIITGRIEKDFVCHQDTVLSCDISPDATKFSSTSADKTAKIWSFELLSP 1085
Query: 529 VVTFRGHKRGIWSVEFSPVDQVVITASGDKT--IKIWSISDGSCLKTFEGHTSSVLRASF 586
+ RGHK + FS VD ++ A+GD I+IW++S+G L ++
Sbjct: 1086 LHELRGHKGCVRCSVFS-VDSTLL-ATGDDNGEIRIWNVSNGELLHLC---APILVEEGA 1140
Query: 587 LTRGAQIVS-CGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGS 640
T G + C + L V G + K W + G+ ++ F T G+
Sbjct: 1141 ATHGGWVTDLCFSPDSKML--VSAGGYL--------KWWNVVTGESSQTFYTNGT 1185
Score = 104 (41.7 bits), Expect = 9.5e-16, Sum P(2) = 9.5e-16
Identities = 33/159 (20%), Positives = 61/159 (38%)
Query: 493 HGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVI 552
H K + + + + + S D + VW V + H+ + + + ++
Sbjct: 967 HKKTVRHIQFTDDGKTLISSSDDSSIQVWNWQS-EEYVFLQAHQETVKDFKLLK-NSKLL 1024
Query: 553 TASGDKTIK-IWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGE 611
+ S D T+K IWSI G K F H +VL + S AD K+W+
Sbjct: 1025 SWSFDGTVKKIWSIITGRIEKDFVCHQDTVLSCDISPDATKFSSTSADKTAKIWSFELLS 1084
Query: 612 CIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLWHDS 650
+ H+ + + + ATG + + +W+ S
Sbjct: 1085 PLHELRGHKGCVRCSVFSVDSTLLATGDDNGEIRIWNVS 1123
Score = 92 (37.4 bits), Expect = 2.7e-06, Sum P(2) = 2.7e-06
Identities = 39/189 (20%), Positives = 76/189 (40%)
Query: 28 SSDGSFIACACGESINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRVW 87
S+DG+ I A I + ++ + + G + + SPD +S + IR+W
Sbjct: 815 SADGTRIMVAAKNKIFLWNMDSCLKVADCRGHLSWVHCVMFSPDGSSFLTSSDDQTIRLW 874
Query: 88 DLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVV 147
+ T K ++ I + + ++ +++ + + G + + V
Sbjct: 875 E--TKKVCKNSAIVLKQEIDVVFQENEVMVLAVDNIKRLQLINGKTGQIDYLIEAQ---V 929
Query: 148 SSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAG 207
S P + + F G D A V + +LL + + H V + T DG TLIS+
Sbjct: 930 SCCCLSPHL-QYIAFGGEDGA-VEILELLNNRIFQSRIGHKKTVRHIQFTDDGKTLISSS 987
Query: 208 RDKVVNLWD 216
D + +W+
Sbjct: 988 DDSSIQVWN 996
>UNIPROTKB|F1NII4 [details] [associations]
symbol:NLE1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0001826 "inner cell mass cell differentiation"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0007219
"Notch signaling pathway" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GeneTree:ENSGT00690000102167 PRINTS:PR00319 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 EMBL:AADN02025808 EMBL:AADN02025807
IPI:IPI00592422 ProteinModelPortal:F1NII4
Ensembl:ENSGALT00000007475 Uniprot:F1NII4
Length = 498
Score = 246 (91.7 bits), Expect = 1.1e-17, P = 1.1e-17
Identities = 69/288 (23%), Positives = 128/288 (44%)
Query: 362 LGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDN 421
+ E +YLA A+ ++++D C +L GH++ V TC G L+ + S+D
Sbjct: 225 INPECRYLASASKDGSIRIWDTLMGRCDKILTGHTQSV----TCVKWGGDGLLYSSSQDR 280
Query: 422 SVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQP 481
++++W S+ GH V +A S +D+ ++ +F+ ++ P
Sbjct: 281 TIKVWRSQDGILCRTLQGHAHWVNTMALS-----------TDYVLRTGAFEP-AEATINP 328
Query: 482 MNLKAK-AVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWR-LPDLVSVVTFRGHKRGI 539
++ A + + + +GS D T +WR D + GH+ I
Sbjct: 329 QDMSGSLAELKDKAQQRYDKVRGQGPERLVSGSDDFTLFLWRPAEDKKPLERMTGHQALI 388
Query: 540 WSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGAD 599
V FSP +++ +AS DK+IK+W G L + GH S+V + ++ +VS +D
Sbjct: 389 NQVLFSPDTRIIASASFDKSIKLWEGRTGKYLTSLRGHVSAVYQIAWSADSRLLVSGSSD 448
Query: 600 GLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLW 647
+K+W T + H D+++A + A+GG D + +W
Sbjct: 449 STLKVWDAETKKLAIDLPGHADEVFATDWSPDGQRVASGGKDKCLRIW 496
Score = 209 (78.6 bits), Expect = 1.4e-13, P = 1.4e-13
Identities = 72/307 (23%), Positives = 134/307 (43%)
Query: 351 GYNEEILDLKFLGEEEQYLAVATNIEQVQVYD-LSSMSCSYVLAGHSEIVLCL--DTCAL 407
G+ +L + + + ++ LA Q+ ++D + VL GHS+ + CL + +
Sbjct: 167 GHRHWVLSIAWSPDGKK-LASGCKNSQIFLWDPATGNQIGRVLTGHSKWITCLCWEPLHI 225
Query: 408 SSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIK 467
+ + + SKD S+R+WD+ C + TGH +V V + L S S D TIK
Sbjct: 226 NPECRYLASASKDGSIRIWDTLMGRCDKILTGHTQSVTCVKWGG--DGLLYSSSQDRTIK 283
Query: 468 VW-SFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDL 526
VW S DG+ Q H +N++A++ D ++ TG+ + D+
Sbjct: 284 VWRSQDGILCRTLQ-----------GHAHWVNTMALS-TDYVLRTGAFEPAEATINPQDM 331
Query: 527 V-SVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWS-ISDGSCLKTFEGHTSSVLRA 584
S+ + + + + +++ S D T+ +W D L+ GH + + +
Sbjct: 332 SGSLAELKDKAQQRYDKVRGQGPERLVSGSDDFTLFLWRPAEDKKPLERMTGHQALINQV 391
Query: 585 SFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALV 644
F I S D +KLW RTG+ + + H ++ +A + + +G SD+ +
Sbjct: 392 LFSPDTRIIASASFDKSIKLWEGRTGKYLTSLRGHVSAVYQIAWSADSRLLVSGSSDSTL 451
Query: 645 NLWHDST 651
+W T
Sbjct: 452 KVWDAET 458
Score = 205 (77.2 bits), Expect = 7.4e-22, Sum P(2) = 7.4e-22
Identities = 49/170 (28%), Positives = 82/170 (48%)
Query: 54 STIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPS 113
S++EG ++ + ++A SP K L S +R WDLST + KGH + +A P
Sbjct: 121 SSLEGHTEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPQFTAKGHRHWVLSIAWSPD 180
Query: 114 GGLLATAGADRKVLVWD-VDGGFCTHYFKGHKGVVSSILFHP---DTDKSLLFSGSDDAT 169
G LA+ + ++ +WD G GH ++ + + P + + L S S D +
Sbjct: 181 GKKLASGCKNSQIFLWDPATGNQIGRVLTGHSKWITCLCWEPLHINPECRYLASASKDGS 240
Query: 170 VRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRD 219
+R+WD L +C L H VT + DG L S+ +D+ + +W +D
Sbjct: 241 IRIWDTLMGRCDKILTGHTQSVTCVKWGGDG-LLYSSSQDRTIKVWRSQD 289
Score = 191 (72.3 bits), Expect = 1.3e-11, P = 1.3e-11
Identities = 94/396 (23%), Positives = 169/396 (42%)
Query: 93 KCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILF 152
+C S +GH I +A P+G LA+ D V WD+ KGH+ V SI +
Sbjct: 118 RCTSSLEGHTEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPQFTAKGHRHWVLSIAW 177
Query: 153 HPDTDKSLLFSGSDDATVRVWDLLAKKCVA-TLDKHFSRVTSMA-----ITSDGSTLISA 206
PD K L SG ++ + +WD + L H +T + I + L SA
Sbjct: 178 SPDGKK--LASGCKNSQIFLWDPATGNQIGRVLTGHSKWITCLCWEPLHINPECRYLASA 235
Query: 207 GRDKVVNLWDLRDYSCKLTVPTYEMVEAVCAIPPGSAFDSFLSSYNQ-QTIKKKR----- 260
+D + +WD C + + ++V + G D L S +Q +TIK R
Sbjct: 236 SKDGSIRIWDTLMGRCDKILTGH--TQSVTCVKWGG--DGLLYSSSQDRTIKVWRSQDGI 291
Query: 261 --RSLEIHFITVGERGIVRMWNADSACLYEQKSS----DVTISF-EMDDSKRGFTAATVL 313
R+L+ H V + + + +++ D++ S E+ D +
Sbjct: 292 LCRTLQGHAHWVNTMALSTDYVLRTGAFEPAEATINPQDMSGSLAELKDKAQQRYDKVRG 351
Query: 314 PSNQGLLCVTADQQLLLYTTVEVPEKKMELILSKRLVGYNEEILDLKFLGEEEQYLAVAT 373
+ L+ + D L L+ E +K +E R+ G+ I + F + + +A A+
Sbjct: 352 QGPERLVSGSDDFTLFLWRPAE-DKKPLE-----RMTGHQALINQVLF-SPDTRIIASAS 404
Query: 374 NIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCC 433
+ +++++ + L GH V + A S+ L+V+GS D+++++WD+E++
Sbjct: 405 FDKSIKLWEGRTGKYLTSLRGHVSAVYQI---AWSADSRLLVSGSSDSTLKVWDAETKKL 461
Query: 434 VGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVW 469
GH V A +S Q + SG D +++W
Sbjct: 462 AIDLPGHADEVFATDWSPDGQR-VASGGKDKCLRIW 496
Score = 169 (64.5 bits), Expect = 7.7e-18, Sum P(2) = 7.7e-18
Identities = 53/180 (29%), Positives = 83/180 (46%)
Query: 28 SSDGSFIACACGES-INIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRV 86
S G ++A G++ + DLS + + T +G + ++A SPD K L S + +I +
Sbjct: 136 SPTGKYLASGSGDTTVRFWDLSTETPQFTAKGHRHWVLSIAWSPDGKKLASGCKNSQIFL 195
Query: 87 WDLSTLKCL-RSWKGHDGPAIGMAC------HPSGGLLATAGADRKVLVWDVDGGFCTHY 139
WD +T + R GH I C +P LA+A D + +WD G C
Sbjct: 196 WDPATGNQIGRVLTGHS-KWITCLCWEPLHINPECRYLASASKDGSIRIWDTLMGRCDKI 254
Query: 140 FKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSD 199
GH V+ + + D LL+S S D T++VW TL H V +MA+++D
Sbjct: 255 LTGHTQSVTCVKWGGD---GLLYSSSQDRTIKVWRSQDGILCRTLQGHAHWVNTMALSTD 311
Score = 157 (60.3 bits), Expect = 7.0e-08, P = 7.0e-08
Identities = 48/178 (26%), Positives = 75/178 (42%)
Query: 41 SINIVDLSN--ASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRVW-DLSTLKCLRS 97
+IN D+S A +K + D + P+ L S + +W K L
Sbjct: 325 TINPQDMSGSLAELKDKAQQRYDKVRGQG--PER--LVSGSDDFTLFLWRPAEDKKPLER 380
Query: 98 WKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTD 157
GH + P ++A+A D+ + +W+ G +GH V I + D
Sbjct: 381 MTGHQALINQVLFSPDTRIIASASFDKSIKLWEGRTGKYLTSLRGHVSAVYQIAW--SAD 438
Query: 158 KSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLW 215
LL SGS D+T++VWD KK L H V + + DG + S G+DK + +W
Sbjct: 439 SRLLVSGSSDSTLKVWDAETKKLAIDLPGHADEVFATDWSPDGQRVASGGKDKCLRIW 496
Score = 129 (50.5 bits), Expect = 7.4e-22, Sum P(2) = 7.4e-22
Identities = 37/131 (28%), Positives = 62/131 (47%)
Query: 392 LAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSK 451
+ GH ++ + S +I + S D S++LW+ + + GH+ AV +A+S
Sbjct: 381 MTGHQALI---NQVLFSPDTRIIASASFDKSIKLWEGRTGKYLTSLRGHVSAVYQIAWSA 437
Query: 452 KLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCT 511
LVSGSSD T+KVW DAE K + H ++ + +P+ V +
Sbjct: 438 D-SRLLVSGSSDSTLKVW-------DAETK---KLAIDLPGHADEVFATDWSPDGQRVAS 486
Query: 512 GSQDRTACVWR 522
G +D+ +WR
Sbjct: 487 GGKDKCLRIWR 497
Score = 122 (48.0 bits), Expect = 0.00046, P = 0.00046
Identities = 32/123 (26%), Positives = 53/123 (43%)
Query: 531 TFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRG 590
+ GH + SV FSP + + + SGD T++ W +S + T +GH VL ++ G
Sbjct: 122 SLEGHTEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPQFTAKGHRHWVLSIAWSPDG 181
Query: 591 AQIVSCGADGLVKLWTVRTGECIA-TYDKHEDKI----WA-LAVGKKTEMFATGGSDALV 644
++ S + + LW TG I H I W L + + A+ D +
Sbjct: 182 KKLASGCKNSQIFLWDPATGNQIGRVLTGHSKWITCLCWEPLHINPECRYLASASKDGSI 241
Query: 645 NLW 647
+W
Sbjct: 242 RIW 244
Score = 120 (47.3 bits), Expect = 0.00075, P = 0.00075
Identities = 32/161 (19%), Positives = 68/161 (42%)
Query: 493 HGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVI 552
H + + S+A +P + +GS D T W L T +GH+ + S+ +SP + +
Sbjct: 126 HTEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPQFTAKGHRHWVLSIAWSPDGKKLA 185
Query: 553 TASGDKTIKIWSISDGSCL-KTFEGHTSSVLRASF--LTRGAQ---IVSCGADGLVKLWT 606
+ + I +W + G+ + + GH+ + + L + + S DG +++W
Sbjct: 186 SGCKNSQIFLWDPATGNQIGRVLTGHSKWITCLCWEPLHINPECRYLASASKDGSIRIWD 245
Query: 607 VRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLW 647
G C H + + G ++++ D + +W
Sbjct: 246 TLMGRCDKILTGHTQSVTCVKWGGDGLLYSSS-QDRTIKVW 285
Score = 51 (23.0 bits), Expect = 2.2e-05, Sum P(2) = 2.2e-05
Identities = 20/87 (22%), Positives = 38/87 (43%)
Query: 26 VVSSDGSFIACACGESINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIR 85
V++ +I C C E ++I + + S + GS I + DK+L +GH++ +
Sbjct: 207 VLTGHSKWITCLCWEPLHI-NPECRYLASASKDGSIRIWDTLMGRCDKIL--TGHTQSVT 263
Query: 86 V--WDLSTL-------KCLRSWKGHDG 103
W L + ++ W+ DG
Sbjct: 264 CVKWGGDGLLYSSSQDRTIKVWRSQDG 290
>UNIPROTKB|F1Q410 [details] [associations]
symbol:APAF1 "Apoptotic protease-activating factor 1"
species:9615 "Canis lupus familiaris" [GO:0043531 "ADP binding"
evidence=IEA] [GO:0042981 "regulation of apoptotic process"
evidence=IEA] [GO:0006952 "defense response" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] InterPro:IPR017986
InterPro:IPR000767 InterPro:IPR001315 InterPro:IPR001680
InterPro:IPR002182 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00619
Pfam:PF00931 PRINTS:PR00364 PROSITE:PS50082 PROSITE:PS50209
PROSITE:PS50294 SMART:SM00320 GO:GO:0006952 GO:GO:0042981
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043531
GO:GO:0005622 Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986
OMA:KVCKNSA GeneTree:ENSGT00700000104017 EMBL:AAEX03009966
Ensembl:ENSCAFT00000010576 Uniprot:F1Q410
Length = 1258
Score = 184 (69.8 bits), Expect = 7.4e-22, Sum P(2) = 7.4e-22
Identities = 51/207 (24%), Positives = 87/207 (42%)
Query: 12 CEPVLQQFYGGGPLVVSSDGSFIACACGESINIVDLSNASIKSTIEGGSDTITALALSPD 71
CEP + Y L + E IN ++ N S + + +D + S D
Sbjct: 577 CEPETSEVYQQAKLQAKQEVDH-GMLYLEWINKKNIKNLS-RLVVRPHTDAVYHACFSED 634
Query: 72 DKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDV 131
+ + S G + ++V+ T + L K H+ + A +AT D+KV +W+
Sbjct: 635 GQRIASCGVDKTLQVFKAETGEKLLEIKAHEDEVLCCAFSTDDRFIATCSVDKKVKIWNS 694
Query: 132 DGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRV 191
G H + H V+ F ++ LL + S D +++WDL K+C T+ H + V
Sbjct: 695 MTGGLVHVYDEHSEQVNCCHFTNNSHYLLLATASSDCFLKLWDLNQKECRNTMFGHTNSV 754
Query: 192 TSMAITSDGSTLISAGRDKVVNLWDLR 218
+ D L S D + LWD++
Sbjct: 755 NHCRFSPDDKLLASCSADGTLKLWDVK 781
Score = 176 (67.0 bits), Expect = 2.3e-09, P = 2.3e-09
Identities = 70/296 (23%), Positives = 131/296 (44%)
Query: 325 DQQLLLYTTVEVPEKKMELILSKRLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLS 384
D+ L ++ E EK +E+ + +E+L F +++++A + ++V++++
Sbjct: 644 DKTLQVFKA-ETGEKLLEI------KAHEDEVLCCAF-STDDRFIATCSVDKKVKIWNSM 695
Query: 385 SMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAV 444
+ +V HSE V C +S +L+ T S D ++LWD + C GH +V
Sbjct: 696 TGGLVHVYDEHSEQVNCCHFTN-NSHYLLLATASSDCFLKLWDLNQKECRNTMFGHTNSV 754
Query: 445 GAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAP 504
FS L S S+D T+K+W D S + + +N+K + + ++ + V
Sbjct: 755 NHCRFSPD-DKLLASCSADGTLKLW--DVKSANERKSINVKQFFLNSEEPQEDMEVIVK- 810
Query: 505 NDSLVCTGSQDRTACVWRLPD---LVSVVT-------FRGHKRGIWSVEFSPVDQVVITA 554
C+ S D T + + L + T GH I +FSP + + + A
Sbjct: 811 ----CCSWSADGTRIMVAAKNKIFLFDIHTGGLLAEIHTGHHSTIQYCDFSPQNHLAVVA 866
Query: 555 SGDKTIKIWSISDGSCLKTFE--GHTSSVLRASFLTRGAQIVSCGADGLVKLWTVR 608
+++W++ SCLK + GH S V F G+ ++ D ++LW +
Sbjct: 867 LSQCCVELWNMD--SCLKVADCRGHLSWVHCVMFSPDGSSFLTSSDDQTIRLWETK 920
Score = 163 (62.4 bits), Expect = 7.4e-22, Sum P(2) = 7.4e-22
Identities = 79/292 (27%), Positives = 126/292 (43%)
Query: 339 KKMELILSKR-LVGYNEEI-LDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHS 396
K+++LI K + Y E + L QY+A V++ +L + GH
Sbjct: 952 KRLQLINGKTGQIDYLIEAQVSCCCLSPHLQYIAFGGEDGAVEILELLNNRIFQSRIGHK 1011
Query: 397 EIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNF 456
+ V + GK LI + S D+S+++W+ +S V + H V K +
Sbjct: 1012 KTVRHIQFT--DDGKTLI-SSSDDSSIQVWNWQSEEYVFL-QAHQETVKDFKLLKNSK-- 1065
Query: 457 LVSGSSDHTIK-VWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQD 515
L+S S D T+K +WS ++ E+ H + S ++P+ + + S D
Sbjct: 1066 LLSWSFDGTVKKIWSI--ITGRIEKDF--------VCHQDTVLSCDISPDATKFSSTSAD 1115
Query: 516 RTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKT--IKIWSISDGSCLKT 573
+TA +W L + RGHK + FS VD ++ A+GD I+IW++S+G L
Sbjct: 1116 KTAKIWSFELLSPLHELRGHKGCVRCSVFS-VDSTLL-ATGDDNGEIRIWNVSNGELLHL 1173
Query: 574 F------EG---HTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATY 616
EG H V F +VS G G +K W V TGE T+
Sbjct: 1174 CAPILVEEGAATHGGWVTDLCFSPDSKMLVSAG--GYLKWWNVVTGESSQTF 1223
Score = 162 (62.1 bits), Expect = 7.4e-08, P = 7.4e-08
Identities = 123/583 (21%), Positives = 236/583 (40%)
Query: 28 SSDGSFIA-CACGESINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSRE--I 84
S+D FIA C+ + + I + + + S+ + + + L + S + +
Sbjct: 674 STDDRFIATCSVDKKVKIWNSMTGGLVHVYDEHSEQVNCCHFTNNSHYLLLATASSDCFL 733
Query: 85 RVWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHK 144
++WDL+ +C + GH P LLA+ AD + +WDV +
Sbjct: 734 KLWDLNQKECRNTMFGHTNSVNHCRFSPDDKLLASCSADGTLKLWDVKSANERKSINVKQ 793
Query: 145 GVVSSILFHPDTDKSLLF---SGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGS 201
++S P D ++ S S D T R+ + AK + D H + + T S
Sbjct: 794 FFLNSE--EPQEDMEVIVKCCSWSADGT-RIM-VAAKNKIFLFDIHTGGLLAEIHTGHHS 849
Query: 202 TL------------ISAGRDKVVNLWDLRDYSCKLTVPTYEM--VEAVCAIPPGSAFDSF 247
T+ + A V LW++ D K+ + V V P GS SF
Sbjct: 850 TIQYCDFSPQNHLAVVALSQCCVELWNM-DSCLKVADCRGHLSWVHCVMFSPDGS---SF 905
Query: 248 LSSYNQQTIKK-KRRSLEIHFITVGERGIVRMWNADSACLYEQKSSDVTISFEMDDSKRG 306
L+S + QTI+ + + + + V ++ I ++ + + + D ++ + K G
Sbjct: 906 LTSSDDQTIRLWETKKVCKNSAIVLKQEIDVVFQENEVMVL---AVDNIKRLQLINGKTG 962
Query: 307 FTAATVLPSNQGLLCVTADQQLLLYT----TVEVPEKKMELILSKRLVGYNEEILDLKFL 362
++ + C++ Q + + VE+ E I R +G+ + + ++F
Sbjct: 963 -QIDYLIEAQVSCCCLSPHLQYIAFGGEDGAVEILELLNNRIFQSR-IGHKKTVRHIQFT 1020
Query: 363 GEEEQYLAVATNIEQVQVYDLSSMSCSYV-LAGHSEIVLCLDTCALSSGKILIVTGSKDN 421
++ + L +++ +QV++ S YV L H E V D L + K+L + S D
Sbjct: 1021 -DDGKTLISSSDDSSIQVWNWQSEE--YVFLQAHQETVK--DFKLLKNSKLL--SWSFDG 1073
Query: 422 SVR-LWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQ 480
+V+ +W + H V + S F S S+D T K+WSF+ LS
Sbjct: 1074 TVKKIWSIITGRIEKDFVCHQDTVLSCDISPDATKFS-STSADKTAKIWSFELLS----- 1127
Query: 481 PMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPD------LVSVVTFRG 534
P++ + H + + + +L+ TG + +W + + ++ G
Sbjct: 1128 PLH-----ELRGHKGCVRCSVFSVDSTLLATGDDNGEIRIWNVSNGELLHLCAPILVEEG 1182
Query: 535 HK-RGIWSVE--FSPVDQVVITASGDKTIKIWSISDGSCLKTF 574
G W + FSP +++++A G +K W++ G +TF
Sbjct: 1183 AATHGGWVTDLCFSPDSKMLVSAGG--YLKWWNVVTGESSQTF 1223
Score = 157 (60.3 bits), Expect = 2.6e-07, P = 2.6e-07
Identities = 46/172 (26%), Positives = 77/172 (44%)
Query: 440 HMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINS 499
H AV FS+ Q + S D T++V+ ++ E+ + +KA H ++
Sbjct: 622 HTDAVYHACFSEDGQR-IASCGVDKTLQVFK----AETGEKLLEIKA------HEDEVLC 670
Query: 500 LAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVI--TASGD 557
A + +D + T S D+ +W V + H + F+ ++ TAS D
Sbjct: 671 CAFSTDDRFIATCSVDKKVKIWNSMTGGLVHVYDEHSEQVNCCHFTNNSHYLLLATASSD 730
Query: 558 KTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRT 609
+K+W ++ C T GHT+SV F + SC ADG +KLW V++
Sbjct: 731 CFLKLWDLNQKECRNTMFGHTNSVNHCRFSPDDKLLASCSADGTLKLWDVKS 782
Score = 147 (56.8 bits), Expect = 3.0e-06, P = 3.0e-06
Identities = 33/123 (26%), Positives = 55/123 (44%)
Query: 527 VSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASF 586
+S + R H ++ FS Q + + DKT++++ G L + H VL +F
Sbjct: 614 LSRLVVRPHTDAVYHACFSEDGQRIASCGVDKTLQVFKAETGEKLLEIKAHEDEVLCCAF 673
Query: 587 LTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTE--MFATGGSDALV 644
T I +C D VK+W TG + YD+H +++ + + AT SD +
Sbjct: 674 STDDRFIATCSVDKKVKIWNSMTGGLVHVYDEHSEQVNCCHFTNNSHYLLLATASSDCFL 733
Query: 645 NLW 647
LW
Sbjct: 734 KLW 736
Score = 115 (45.5 bits), Expect = 1.4e-14, Sum P(2) = 1.4e-14
Identities = 33/125 (26%), Positives = 56/125 (44%)
Query: 105 AIGMACHPSGGL-LATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFS 163
A+ AC G +A+ G D+ + V+ + G K H+ V F TD + +
Sbjct: 625 AVYHACFSEDGQRIASCGVDKTLQVFKAETGEKLLEIKAHEDEVLCCAF--STDDRFIAT 682
Query: 164 GSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLI--SAGRDKVVNLWDLRDYS 221
S D V++W+ + V D+H +V T++ L+ +A D + LWDL
Sbjct: 683 CSVDKKVKIWNSMTGGLVHVYDEHSEQVNCCHFTNNSHYLLLATASSDCFLKLWDLNQKE 742
Query: 222 CKLTV 226
C+ T+
Sbjct: 743 CRNTM 747
Score = 107 (42.7 bits), Expect = 5.1e-16, Sum P(2) = 5.1e-16
Identities = 43/175 (24%), Positives = 73/175 (41%)
Query: 469 WSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVS 528
WSFDG + + + H + S ++P+ + + S D+TA +W L
Sbjct: 1069 WSFDGTVKKIWSIITGRIEKDFVCHQDTVLSCDISPDATKFSSTSADKTAKIWSFELLSP 1128
Query: 529 VVTFRGHKRGIWSVEFSPVDQVVITASGDKT--IKIWSISDGSCLKTFEGHTSSVLRASF 586
+ RGHK + FS VD ++ A+GD I+IW++S+G L ++
Sbjct: 1129 LHELRGHKGCVRCSVFS-VDSTLL-ATGDDNGEIRIWNVSNGELLHLC---APILVEEGA 1183
Query: 587 LTRGAQIVS-CGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGS 640
T G + C + L V G + K W + G+ ++ F T G+
Sbjct: 1184 ATHGGWVTDLCFSPDSKML--VSAGGYL--------KWWNVVTGESSQTFYTNGT 1228
Score = 104 (41.7 bits), Expect = 1.0e-15, Sum P(2) = 1.0e-15
Identities = 33/159 (20%), Positives = 61/159 (38%)
Query: 493 HGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVI 552
H K + + + + + S D + VW V + H+ + + + ++
Sbjct: 1010 HKKTVRHIQFTDDGKTLISSSDDSSIQVWNWQS-EEYVFLQAHQETVKDFKLLK-NSKLL 1067
Query: 553 TASGDKTIK-IWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGE 611
+ S D T+K IWSI G K F H +VL + S AD K+W+
Sbjct: 1068 SWSFDGTVKKIWSIITGRIEKDFVCHQDTVLSCDISPDATKFSSTSADKTAKIWSFELLS 1127
Query: 612 CIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLWHDS 650
+ H+ + + + ATG + + +W+ S
Sbjct: 1128 PLHELRGHKGCVRCSVFSVDSTLLATGDDNGEIRIWNVS 1166
Score = 47 (21.6 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 15/64 (23%), Positives = 25/64 (39%)
Query: 187 HFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYEMVEAVCAIPPGSAFDS 246
H V + DG + S G DK + ++ L + +E CA S D
Sbjct: 622 HTDAVYHACFSEDGQRIASCGVDKTLQVFKAETGEKLLEIKAHEDEVLCCAF---STDDR 678
Query: 247 FLSS 250
F+++
Sbjct: 679 FIAT 682
>UNIPROTKB|E2RGD1 [details] [associations]
symbol:POC1A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005932 "microtubule basal body"
evidence=IEA] [GO:0005814 "centriole" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 EMBL:AAEX03012199
ProteinModelPortal:E2RGD1 Ensembl:ENSCAFT00000015650 OMA:IVWGLET
Uniprot:E2RGD1
Length = 406
Score = 277 (102.6 bits), Expect = 9.3e-22, P = 9.3e-22
Identities = 79/303 (26%), Positives = 138/303 (45%)
Query: 345 LSKRLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDT 404
L + G+ + I + F +Q LA + + V+ + S +Y AGH + V C++
Sbjct: 11 LERHFKGHRDAITSVDFSLNTKQ-LASGSMDSCLMVWHMKPQSRAYRFAGHKDAVTCVNF 69
Query: 405 CALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDH 464
SG +L +GS+D +VR+W + V H V +V F Q+ LV+ S D
Sbjct: 70 SP--SGHLL-ASGSRDKTVRIWIPNVKGESTVFRAHTATVRSVHFCSDGQS-LVTASDDK 125
Query: 465 TIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLP 524
T+KVWS K ++ H + +P+ L+ + S D+T +W
Sbjct: 126 TVKVWSTH----------RQKFLFSLSQHINWVRCARFSPDGRLIVSASDDKTVKLWDKT 175
Query: 525 DLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRA 584
V ++ H + V+F P + AS D T+K+W + L+ ++ H+++V
Sbjct: 176 SRECVHSYCEHGGFVTYVDFHPSGTCIAAASMDNTVKVWDVRTHRLLQHYQLHSAAVNAL 235
Query: 585 SFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALV 644
SF G +++ +D +K+ + G + T H+ +A + E FA+GGSD V
Sbjct: 236 SFHPSGNYLLTASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQV 295
Query: 645 NLW 647
+W
Sbjct: 296 MVW 298
Score = 230 (86.0 bits), Expect = 3.4e-16, P = 3.4e-16
Identities = 52/197 (26%), Positives = 97/197 (49%)
Query: 29 SDG-SFIACACGESINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRVW 87
SDG S + + +++ + ++ + + SPD +L+ S+ + +++W
Sbjct: 113 SDGQSLVTASDDKTVKVWSTHRQKFLFSLSQHINWVRCARFSPDGRLIVSASDDKTVKLW 172
Query: 88 DLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVV 147
D ++ +C+ S+ H G + HPSG +A A D V VWDV +++ H V
Sbjct: 173 DKTSRECVHSYCEHGGFVTYVDFHPSGTCIAAASMDNTVKVWDVRTHRLLQHYQLHSAAV 232
Query: 148 SSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAG 207
+++ FHP + L + S D+T+++ DL+ + + TL H T++A + G S G
Sbjct: 233 NALSFHPSGN--YLLTASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGG 290
Query: 208 RDKVVNLW----DLRDY 220
D+ V +W D+ DY
Sbjct: 291 SDEQVMVWKSNFDVVDY 307
Score = 204 (76.9 bits), Expect = 1.3e-14, Sum P(2) = 1.3e-14
Identities = 54/174 (31%), Positives = 83/174 (47%)
Query: 51 SIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMAC 110
S++ +G D IT++ S + K L S + VW + + GH +
Sbjct: 10 SLERHFKGHRDAITSVDFSLNTKQLASGSMDSCLMVWHMKPQSRAYRFAGHKDAVTCVNF 69
Query: 111 HPSGGLLATAGADRKVLVW--DVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDA 168
PSG LLA+ D+ V +W +V G + F+ H V S+ F D +SL+ + SDD
Sbjct: 70 SPSGHLLASGSRDKTVRIWIPNVKGE--STVFRAHTATVRSVHFCSD-GQSLV-TASDDK 125
Query: 169 TVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSC 222
TV+VW +K + +L +H + V + DG ++SA DK V LWD C
Sbjct: 126 TVKVWSTHRQKFLFSLSQHINWVRCARFSPDGRLIVSASDDKTVKLWDKTSREC 179
Score = 180 (68.4 bits), Expect = 7.4e-12, Sum P(2) = 7.4e-12
Identities = 46/193 (23%), Positives = 86/193 (44%)
Query: 28 SSDGSFIACACGESINIVDLSNASIKSTI-EGGSDTITALALSPDDKLLFSSGHSREIRV 86
S G +A + + + N +ST+ + T+ ++ D + L ++ + ++V
Sbjct: 70 SPSGHLLASGSRDKTVRIWIPNVKGESTVFRAHTATVRSVHFCSDGQSLVTASDDKTVKV 129
Query: 87 WDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGV 146
W K L S H P G L+ +A D+ V +WD C H + H G
Sbjct: 130 WSTHRQKFLFSLSQHINWVRCARFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGF 189
Query: 147 VSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISA 206
V+ + FHP + + + S D TV+VWD+ + + H + V +++ G+ L++A
Sbjct: 190 VTYVDFHPSG--TCIAAASMDNTVKVWDVRTHRLLQHYQLHSAAVNALSFHPSGNYLLTA 247
Query: 207 GRDKVVNLWDLRD 219
D + + DL +
Sbjct: 248 SSDSTLKILDLME 260
Score = 56 (24.8 bits), Expect = 1.3e-14, Sum P(2) = 1.3e-14
Identities = 17/61 (27%), Positives = 24/61 (39%)
Query: 368 YLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWD 427
YL A++ +++ DL Y L GH T A S +G D V +W
Sbjct: 243 YLLTASSDSTLKILDLMEGRLLYTLHGHQGPAT---TVAFSRTGEYFASGGSDEQVMVWK 299
Query: 428 S 428
S
Sbjct: 300 S 300
>UNIPROTKB|G4NFU5 [details] [associations]
symbol:MGG_08708 "WD repeat-containing protein"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 EMBL:CM001236 PRINTS:PR00319
KO:K14855 RefSeq:XP_003719269.1 ProteinModelPortal:G4NFU5
EnsemblFungi:MGG_08708T0 GeneID:2678953 KEGG:mgr:MGG_08708
Uniprot:G4NFU5
Length = 526
Score = 228 (85.3 bits), Expect = 9.8e-22, Sum P(2) = 9.8e-22
Identities = 67/274 (24%), Positives = 121/274 (44%)
Query: 379 QVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVGT 438
+++ +++ +VL+GH V C+ A +G ++ T S D +V++WD+ +
Sbjct: 269 RIWTVNTGRTEHVLSGHKGSVSCVRWGA-GNGTGVVYTASHDKTVKVWDAVKGTLLHDLK 327
Query: 439 GHMGAVGAVAFSKKLQNFLV-SGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDI 497
H V +A S +F+ +G DHT V +++ + + GK +
Sbjct: 328 SHAHWVNHLALST---DFVCRTGFFDHTKTV---PATAEEKTAKAKERYEKAARVGGKIV 381
Query: 498 NSLAVAPNDSLVCTGS--QDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITAS 555
L A +D + D T + R+ GH++ + V FSP ++ +A
Sbjct: 382 ERLVSASDDFTMYLFDPLNDGTKPIARMI---------GHQKQVNHVTFSPDGSMIASAG 432
Query: 556 GDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIAT 615
D K+W+ DG + T GH + V + SF +V+ D +K+W VRTG+
Sbjct: 433 WDNATKLWNARDGKFINTLRGHVAPVYQCSFSADSRLLVTASKDTTLKVWNVRTGKLATD 492
Query: 616 YDKHEDKIWALAVGKKTEMFATGGSDALVNLWHD 649
HED+++ + + +GG D V LW +
Sbjct: 493 LPGHEDEVYGVDWSPDGQRVGSGGRDKAVRLWRN 526
Score = 184 (69.8 bits), Expect = 8.6e-11, P = 8.6e-11
Identities = 62/225 (27%), Positives = 104/225 (46%)
Query: 363 GEEEQYLAVATNIEQVQ-VYDLSSMS-CSYVLAGHSEIVLCLDTCALSSGKILIVTGSKD 420
G E+ + T + Q V+ + ++S ++ + GH E +LC SS ++ TGS D
Sbjct: 117 GIEDAFETTLTLAAEPQAVFKVQAVSRLAHRIPGHGEPILCAQFSPASSARL--ATGSGD 174
Query: 421 NSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQ 480
N+ R+WD+E+ GH G V V++S L + S D T+++W D E
Sbjct: 175 NTARIWDAETGTPKHTLKGHAGWVLGVSWSPDGTR-LATCSMDKTVRIW-------DPET 226
Query: 481 PMNLKAKAVVAAHGKDINSLAVAP----NDSL--VCTGSQDRTACVWRLPDLVSVVTFRG 534
+ ++ + H K + +A P D + + S+D TA +W + + G
Sbjct: 227 GKQVGSE--LKGHAKWVQGIAWEPLHLWRDGTPRLVSASKDFTARIWTVNTGRTEHVLSG 284
Query: 535 HKRGIWSVEFSPVDQ--VVITASGDKTIKIWSISDGSCLKTFEGH 577
HK + V + + VV TAS DKT+K+W G+ L + H
Sbjct: 285 HKGSVSCVRWGAGNGTGVVYTASHDKTVKVWDAVKGTLLHDLKSH 329
Score = 180 (68.4 bits), Expect = 2.4e-10, P = 2.4e-10
Identities = 54/190 (28%), Positives = 86/190 (45%)
Query: 22 GGPLVVS--SDGSFIACACGESIN---IVDLSNASIKSTIEGGSDTITALALSPDDKLLF 76
G P++ + S S A G N I D + K T++G + + ++ SPD L
Sbjct: 152 GEPILCAQFSPASSARLATGSGDNTARIWDAETGTPKHTLKGHAGWVLGVSWSPDGTRLA 211
Query: 77 SSGHSREIRVWDLSTLKCLRS-WKGHDGPAIGMACHP----SGGL--LATAGADRKVLVW 129
+ + +R+WD T K + S KGH G+A P G L +A D +W
Sbjct: 212 TCSMDKTVRIWDPETGKQVGSELKGHAKWVQGIAWEPLHLWRDGTPRLVSASKDFTARIW 271
Query: 130 DVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFS 189
V+ G H GHKG VS + + ++++ S D TV+VWD + + L H
Sbjct: 272 TVNTGRTEHVLSGHKGSVSCVRWGAGNGTGVVYTASHDKTVKVWDAVKGTLLHDLKSHAH 331
Query: 190 RVTSMAITSD 199
V +A+++D
Sbjct: 332 WVNHLALSTD 341
Score = 178 (67.7 bits), Expect = 3.8e-16, Sum P(2) = 3.8e-16
Identities = 73/292 (25%), Positives = 127/292 (43%)
Query: 369 LAVATNIEQVQVYDLSS-MSCSYVLAGHSEIV--LCLDTCAL-SSGKILIVTGSKDNSVR 424
LA + + V+++D + L GH++ V + + L G +V+ SKD + R
Sbjct: 210 LATCSMDKTVRIWDPETGKQVGSELKGHAKWVQGIAWEPLHLWRDGTPRLVSASKDFTAR 269
Query: 425 LWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLV-SGSSDHTIKVWSFDGLSDDAEQPMN 483
+W + V +GH G+V V + +V + S D T+KVW DA +
Sbjct: 270 IWTVNTGRTEHVLSGHKGSVSCVRWGAGNGTGVVYTASHDKTVKVW-------DAVKGTL 322
Query: 484 LKAKAVVAAHGKDINSLAVAPNDSLVC-TGSQDRTACVWRLPDLVSVVTFRGHKRGIWSV 542
L + +H +N LA++ + VC TG D T V P T + +R +
Sbjct: 323 LHD---LKSHAHWVNHLALSTD--FVCRTGFFDHTKTV---PATAEEKTAKAKERYEKAA 374
Query: 543 EFS-PVDQVVITASGDKTIKIWS-ISDGSC-LKTFEGHTSSVLRASFLTRGAQIVSCGAD 599
+ + +++AS D T+ ++ ++DG+ + GH V +F G+ I S G D
Sbjct: 375 RVGGKIVERLVSASDDFTMYLFDPLNDGTKPIARMIGHQKQVNHVTFSPDGSMIASAGWD 434
Query: 600 GLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLWHDST 651
KLW R G+ I T H ++ + + + T D + +W+ T
Sbjct: 435 NATKLWNARDGKFINTLRGHVAPVYQCSFSADSRLLVTASKDTTLKVWNVRT 486
Score = 163 (62.4 bits), Expect = 1.7e-08, P = 1.7e-08
Identities = 48/169 (28%), Positives = 69/169 (40%)
Query: 56 IEGGSDTITALALSPDDKLLFSSGHS-REIRVWDLSTLKCLRSWKGHDGPAIGMACHPSG 114
I G + I SP ++G R+WD T + KGH G +G++ P G
Sbjct: 148 IPGHGEPILCAQFSPASSARLATGSGDNTARIWDAETGTPKHTLKGHAGWVLGVSWSPDG 207
Query: 115 GLLATAGADRKVLVWDVDGGFCT-HYFKGHKGVVSSILFHP----DTDKSLLFSGSDDAT 169
LAT D+ V +WD + G KGH V I + P L S S D T
Sbjct: 208 TRLATCSMDKTVRIWDPETGKQVGSELKGHAKWVQGIAWEPLHLWRDGTPRLVSASKDFT 267
Query: 170 VRVWDLLAKKCVATLDKHFSRVTSMAITSDGST--LISAGRDKVVNLWD 216
R+W + + L H V+ + + T + +A DK V +WD
Sbjct: 268 ARIWTVNTGRTEHVLSGHKGSVSCVRWGAGNGTGVVYTASHDKTVKVWD 316
Score = 154 (59.3 bits), Expect = 1.6e-07, P = 1.6e-07
Identities = 36/116 (31%), Positives = 52/116 (44%)
Query: 100 GHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKS 159
GH + P G ++A+AG D +W+ G + +GH V F D
Sbjct: 411 GHQKQVNHVTFSPDGSMIASAGWDNATKLWNARDGKFINTLRGHVAPVYQCSF--SADSR 468
Query: 160 LLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLW 215
LL + S D T++VW++ K L H V + + DG + S GRDK V LW
Sbjct: 469 LLVTASKDTTLKVWNVRTGKLATDLPGHEDEVYGVDWSPDGQRVGSGGRDKAVRLW 524
Score = 153 (58.9 bits), Expect = 2.1e-07, P = 2.1e-07
Identities = 46/168 (27%), Positives = 71/168 (42%)
Query: 490 VAAHGKDINSLAVAPNDSL-VCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVD 548
+ HG+ I +P S + TGS D TA +W T +GH + V +SP
Sbjct: 148 IPGHGEPILCAQFSPASSARLATGSGDNTARIWDAETGTPKHTLKGHAGWVLGVSWSPDG 207
Query: 549 QVVITASGDKTIKIWSISDGSCLKT-FEGHTSSVLRASF----LTRGA--QIVSCGADGL 601
+ T S DKT++IW G + + +GH V ++ L R ++VS D
Sbjct: 208 TRLATCSMDKTVRIWDPETGKQVGSELKGHAKWVQGIAWEPLHLWRDGTPRLVSASKDFT 267
Query: 602 VKLWTVRTGECIATYDKHEDKIWAL--AVGKKTEMFATGGSDALVNLW 647
++WTV TG H+ + + G T + T D V +W
Sbjct: 268 ARIWTVNTGRTEHVLSGHKGSVSCVRWGAGNGTGVVYTASHDKTVKVW 315
Score = 143 (55.4 bits), Expect = 2.6e-06, P = 2.6e-06
Identities = 35/119 (29%), Positives = 53/119 (44%)
Query: 534 GHKRGIWSVEFSPVDQV-VITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQ 592
GH I +FSP + T SGD T +IW G+ T +GH VL S+ G +
Sbjct: 150 GHGEPILCAQFSPASSARLATGSGDNTARIWDAETGTPKHTLKGHAGWVLGVSWSPDGTR 209
Query: 593 IVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLWHDST 651
+ +C D V++W TG+ + + K K W + + G+ LV+ D T
Sbjct: 210 LATCSMDKTVRIWDPETGKQVGSELKGHAK-WVQGIAWEPLHLWRDGTPRLVSASKDFT 267
Score = 130 (50.8 bits), Expect = 6.7e-05, P = 6.7e-05
Identities = 31/116 (26%), Positives = 51/116 (43%)
Query: 58 GGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPSGGLL 117
G + + SPD ++ S+G ++W+ K + + +GH P + LL
Sbjct: 411 GHQKQVNHVTFSPDGSMIASAGWDNATKLWNARDGKFINTLRGHVAPVYQCSFSADSRLL 470
Query: 118 ATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVW 173
TA D + VW+V G GH+ V + + PD + + SG D VR+W
Sbjct: 471 VTASKDTTLKVWNVRTGKLATDLPGHEDEVYGVDWSPDGQR--VGSGGRDKAVRLW 524
Score = 104 (41.7 bits), Expect = 9.8e-22, Sum P(2) = 9.8e-22
Identities = 25/79 (31%), Positives = 35/79 (44%)
Query: 138 HYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAIT 197
H GH + F P + L +GS D T R+WD TL H V ++ +
Sbjct: 146 HRIPGHGEPILCAQFSP-ASSARLATGSGDNTARIWDAETGTPKHTLKGHAGWVLGVSWS 204
Query: 198 SDGSTLISAGRDKVVNLWD 216
DG+ L + DK V +WD
Sbjct: 205 PDGTRLATCSMDKTVRIWD 223
>ZFIN|ZDB-GENE-020905-2 [details] [associations]
symbol:copa "coatomer protein complex, subunit alpha"
species:7955 "Danio rerio" [GO:0030117 "membrane coat"
evidence=IEA] [GO:0005198 "structural molecule activity"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0030126 "COPI vesicle coat" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0030903 "notochord development" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006692
InterPro:IPR010714 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053
Pfam:PF06957 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-020905-2 GO:GO:0006886 GO:GO:0016192
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005198 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030126 GO:GO:0030903 HOGENOM:HOG000195913 InterPro:IPR016391
PIRSF:PIRSF003354 HOVERGEN:HBG005379 EMBL:AY294009 IPI:IPI00509057
UniGene:Dr.2921 ProteinModelPortal:Q6JWU9 STRING:Q6JWU9
InParanoid:Q6JWU9 NextBio:20804725 ArrayExpress:Q6JWU9
Uniprot:Q6JWU9
Length = 1226
Score = 197 (74.4 bits), Expect = 1.0e-21, Sum P(2) = 1.0e-21
Identities = 44/161 (27%), Positives = 71/161 (44%)
Query: 57 EGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPSGGL 116
E S + L+ P + +S H+ I++WD + + HDGP G+ H L
Sbjct: 6 ETKSARVKGLSFHPKRPWILASLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFHKQQPL 65
Query: 117 LATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLL 176
+ G D K+ VW+ C GH + + FH + + S SDD T+R+W+
Sbjct: 66 FVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYP--WILSASDDQTIRIWNWQ 123
Query: 177 AKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDL 217
++ CV L H V ++SA D+ V +WD+
Sbjct: 124 SRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDI 164
Score = 148 (57.2 bits), Expect = 1.0e-21, Sum P(2) = 1.0e-21
Identities = 35/124 (28%), Positives = 63/124 (50%)
Query: 526 LVSVVTFRGHKRGI-WSVEFSPVDQVVITASGDKTIKIWSISDGSC--LKTFEGHTSSVL 582
+V V +GH RG+ W+ F P ++++ + D+ +KIW +++ L T GH ++V
Sbjct: 196 VVKHVLEQGHDRGVNWAA-FHPSMPLIVSGADDRQVKIWRMNESKAWELDTCRGHYNNVS 254
Query: 583 RASFLTRGAQIVSCGADGLVKLWTV--RTGECIATYDKHEDKIWALAVGKKTEMFATGGS 640
A F R I+S D +++W + RTG + T+ + D+ W L +FA G
Sbjct: 255 CAVFHPRQELILSNSEDKSIRVWDMSKRTG--VQTFRRDHDRFWVLGAHPNLNLFAAGHD 312
Query: 641 DALV 644
++
Sbjct: 313 SGML 316
Score = 141 (54.7 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 57/235 (24%), Positives = 94/235 (40%)
Query: 415 VTGSKDNSV-RLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDG 473
+ S N V +LWD + H G V + F K+ Q VSG D+ IKVW++
Sbjct: 24 ILASLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFHKQ-QPLFVSGGDDYKIKVWNYK- 81
Query: 474 LSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFR 533
L + + H I + + + S D+T +W V
Sbjct: 82 LR---------RCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRTCVCVLT 132
Query: 534 GHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFE-GHTSSVLRASFLTRGAQ 592
GH + +F P + +V++AS D+T+++W IS G K G + +R G
Sbjct: 133 GHNHYVMCAQFHPSEDLVVSASLDQTVRVWDIS-GLRKKNLSPGAVDTEVRG---ISGVD 188
Query: 593 IVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLW 647
+ +D +VK + G +D+ + WA A + +G D V +W
Sbjct: 189 LFGA-SDAVVK-HVLEQG-----HDRGVN--WA-AFHPSMPLIVSGADDRQVKIW 233
Score = 136 (52.9 bits), Expect = 4.5e-05, P = 4.5e-05
Identities = 65/288 (22%), Positives = 124/288 (43%)
Query: 107 GMACHPSGGLLATAGADRKVLVWDVDGGFCT--HYFKGHKGVVSSILFHPDTDKSLLFSG 164
G++ HP + + + + +WD CT F H G V I FH + L SG
Sbjct: 14 GLSFHPKRPWILASLHNGVIQLWDYR--MCTLIDKFDEHDGPVRGIDFHKQ--QPLFVSG 69
Query: 165 SDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKL 224
DD ++VW+ ++C+ TL H + + + ++SA D+ + +W+ + +C +
Sbjct: 70 GDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRTC-V 128
Query: 225 TVPTYEMVEAVCA-IPPGSAFDSFLSSYNQQTIKK------KRRSLEIHFITVGERGIVR 277
V T +CA P D +S+ QT++ ++++L + RGI
Sbjct: 129 CVLTGHNHYVMCAQFHPSE--DLVVSASLDQTVRVWDISGLRKKNLSPGAVDTEVRGIS- 185
Query: 278 MWNADSACLYEQKSSDVTISFEMDDSK-RGFTAATVLPSNQGLLCVTADQQLLLYTTVEV 336
D L+ +SD + ++ RG A PS ++ D+Q+ ++ E
Sbjct: 186 --GVD---LFG--ASDAVVKHVLEQGHDRGVNWAAFHPSMPLIVSGADDRQVKIWRMNE- 237
Query: 337 PEKKMELILSKRLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLS 384
K EL + G+ + F +E L+ + + + ++V+D+S
Sbjct: 238 -SKAWELDTCR---GHYNNVSCAVFHPRQELILSNSED-KSIRVWDMS 280
Score = 130 (50.8 bits), Expect = 1.4e-14, Sum P(2) = 1.4e-14
Identities = 30/98 (30%), Positives = 50/98 (51%)
Query: 377 QVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGV 436
+++V++ C + L GH + + T I++ S D ++R+W+ +SR CV V
Sbjct: 74 KIKVWNYKLRRCLFTLLGHLDYIR---TTFFHHEYPWILSASDDQTIRIWNWQSRTCVCV 130
Query: 437 GTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGL 474
TGH V F ++ +VS S D T++VW GL
Sbjct: 131 LTGHNHYVMCAQFHPS-EDLVVSASLDQTVRVWDISGL 167
Score = 130 (50.8 bits), Expect = 0.00020, P = 0.00020
Identities = 34/113 (30%), Positives = 53/113 (46%)
Query: 99 KGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHY--FKGHKGVVSSILFHPDT 156
+GHD A HPS L+ + DR+V +W ++ +GH VS +FHP
Sbjct: 203 QGHDRGVNWAAFHPSMPLIVSGADDRQVKIWRMNESKAWELDTCRGHYNNVSCAVFHPRQ 262
Query: 157 DKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRD 209
+ L+ S S+D ++RVWD+ + V T + R + L +AG D
Sbjct: 263 E--LILSNSEDKSIRVWDMSKRTGVQTFRRDHDRFWVLG-AHPNLNLFAAGHD 312
Score = 98 (39.6 bits), Expect = 3.0e-11, Sum P(2) = 3.0e-11
Identities = 22/79 (27%), Positives = 37/79 (46%)
Query: 55 TIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPSG 114
T+ G D I + + S+ + IR+W+ + C+ GH+ + HPS
Sbjct: 88 TLLGHLDYIRTTFFHHEYPWILSASDDQTIRIWNWQSRTCVCVLTGHNHYVMCAQFHPSE 147
Query: 115 GLLATAGADRKVLVWDVDG 133
L+ +A D+ V VWD+ G
Sbjct: 148 DLVVSASLDQTVRVWDISG 166
Score = 96 (38.9 bits), Expect = 4.8e-11, Sum P(2) = 4.8e-11
Identities = 22/79 (27%), Positives = 43/79 (54%)
Query: 349 LVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALS 408
L+G+ + I F E ++ A++ + +++++ S +C VL GH+ V+C
Sbjct: 89 LLGHLDYIRTT-FFHHEYPWILSASDDQTIRIWNWQSRTCVCVLTGHNHYVMCAQ---FH 144
Query: 409 SGKILIVTGSKDNSVRLWD 427
+ L+V+ S D +VR+WD
Sbjct: 145 PSEDLVVSASLDQTVRVWD 163
Score = 91 (37.1 bits), Expect = 8.6e-16, Sum P(2) = 8.6e-16
Identities = 29/98 (29%), Positives = 45/98 (45%)
Query: 375 IEQVQVYDLSSMSCSYVLA-GHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWD-SESRC 432
I V ++ S +VL GH V + A LIV+G+ D V++W +ES+
Sbjct: 184 ISGVDLFGASDAVVKHVLEQGHDRGV---NWAAFHPSMPLIVSGADDRQVKIWRMNESKA 240
Query: 433 C-VGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVW 469
+ GH V F + Q ++S S D +I+VW
Sbjct: 241 WELDTCRGHYNNVSCAVFHPR-QELILSNSEDKSIRVW 277
Score = 88 (36.0 bits), Expect = 1.8e-15, Sum P(2) = 1.8e-15
Identities = 26/109 (23%), Positives = 46/109 (42%)
Query: 439 GHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDIN 498
GH V AF + +VSG+ D +K+W +++ ++ H +++
Sbjct: 204 GHDRGVNWAAFHPSMP-LIVSGADDRQVKIWR---MNESKAWELD-----TCRGHYNNVS 254
Query: 499 SLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFR-GHKRGIWSVEFSP 546
P L+ + S+D++ VW + V TFR H R W + P
Sbjct: 255 CAVFHPRQELILSNSEDKSIRVWDMSKRTGVQTFRRDHDR-FWVLGAHP 302
Score = 58 (25.5 bits), Expect = 2.3e-12, Sum P(2) = 2.3e-12
Identities = 16/45 (35%), Positives = 22/45 (48%)
Query: 394 GHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVGT 438
GH V C + LI++ S+D S+R+WD R GV T
Sbjct: 248 GHYNNVSC---AVFHPRQELILSNSEDKSIRVWDMSKR--TGVQT 287
>ASPGD|ASPL0000006405 [details] [associations]
symbol:AN6960 species:162425 "Emericella nidulans"
[GO:0055085 "transmembrane transport" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0030001 "metal ion transport"
evidence=IEA] [GO:0046873 "metal ion transmembrane transporter
activity" evidence=IEA] InterPro:IPR002110 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR002523 InterPro:IPR015943
Pfam:PF00400 Pfam:PF01544 PROSITE:PS50082 PROSITE:PS50088
PROSITE:PS50294 SMART:SM00248 SMART:SM00320 GO:GO:0016020
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 EMBL:BN001301 GO:GO:0046873 EMBL:AACD01000116
RefSeq:XP_664564.1 ProteinModelPortal:Q5AXM0
EnsemblFungi:CADANIAT00007778 GeneID:2870438 KEGG:ani:AN6960.2
Uniprot:Q5AXM0
Length = 1878
Score = 300 (110.7 bits), Expect = 1.1e-21, Sum P(2) = 1.1e-21
Identities = 79/307 (25%), Positives = 142/307 (46%)
Query: 345 LSKRLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDT 404
L L G+NE + + F + + LA A++ V+++D ++ + +L GH++ V +
Sbjct: 297 LQNTLEGHNEWVKSVVF-SHDSRLLASASDDGTVKIWDTATGTLQRMLKGHNDSVRSV-- 353
Query: 405 CALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDH 464
S LI +GS D +VR+W++ + H +V AV+F+ + L S S
Sbjct: 354 -VFSHDSRLIASGSNDRTVRIWETTTGLLRHTFEDHEDSVMAVSFAHDSRR-LASASDGG 411
Query: 465 TIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLP 524
+K+W D + + V+ H +NS++ +P+ L+ + S DRT +W
Sbjct: 412 NVKIW--DTRTGSLQN--------VLEGHDDCVNSVSFSPDSRLLASASDDRTVKIWHAA 461
Query: 525 DLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRA 584
T GH + SV FS +++ +AS D T+KIW + E H + V
Sbjct: 462 TGSLQRTLEGHNDWVRSVVFSHDSRLIASASDDMTVKIWDTATVPLQNNLESHDNWVRSV 521
Query: 585 SFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALV 644
F + S D VK+W TG T + H+D++ +++ + + A+ D V
Sbjct: 522 VFSHDSRLLASASDDMTVKIWDTATGSLENTLEGHDDRVNSVSFSPDSRLLASASDDGTV 581
Query: 645 NLWHDST 651
+W+ +T
Sbjct: 582 KIWYAAT 588
Score = 280 (103.6 bits), Expect = 1.6e-19, Sum P(2) = 1.6e-19
Identities = 74/303 (24%), Positives = 133/303 (43%)
Query: 345 LSKRLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDT 404
L + L G+N+ + + F + + +A +N V++++ ++ + H + V+ + +
Sbjct: 339 LQRMLKGHNDSVRSVVF-SHDSRLIASGSNDRTVRIWETTTGLLRHTFEDHEDSVMAV-S 396
Query: 405 CALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDH 464
A S ++ + S +V++WD+ + V GH V +V+FS L S S D
Sbjct: 397 FAHDSRRL--ASASDGGNVKIWDTRTGSLQNVLEGHDDCVNSVSFSPD-SRLLASASDDR 453
Query: 465 TIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLP 524
T+K+W + ++ + H + S+ + + L+ + S D T +W
Sbjct: 454 TVKIWH--AATGSLQRTLE--------GHNDWVRSVVFSHDSRLIASASDDMTVKIWDTA 503
Query: 525 DLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRA 584
+ H + SV FS +++ +AS D T+KIW + GS T EGH V
Sbjct: 504 TVPLQNNLESHDNWVRSVVFSHDSRLLASASDDMTVKIWDTATGSLENTLEGHDDRVNSV 563
Query: 585 SFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALV 644
SF + S DG VK+W TG T+D +LA + + A+ D V
Sbjct: 564 SFSPDSRLLASASDDGTVKIWYAATGTVQHTFDGSGRVAISLAFSHTSNLLASAMDDGTV 623
Query: 645 NLW 647
+W
Sbjct: 624 KIW 626
Score = 257 (95.5 bits), Expect = 5.0e-17, Sum P(2) = 5.0e-17
Identities = 60/213 (28%), Positives = 100/213 (46%)
Query: 439 GHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDIN 498
GH AVG+V+FS L S S D T+K+W D A + + + H + +
Sbjct: 261 GHDRAVGSVSFSHD-SRLLASASGDGTVKIW------DTATSFL----QNTLEGHNEWVK 309
Query: 499 SLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDK 558
S+ + + L+ + S D T +W +GH + SV FS +++ + S D+
Sbjct: 310 SVVFSHDSRLLASASDDGTVKIWDTATGTLQRMLKGHNDSVRSVVFSHDSRLIASGSNDR 369
Query: 559 TIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDK 618
T++IW + G TFE H SV+ SF ++ S G VK+W RTG +
Sbjct: 370 TVRIWETTTGLLRHTFEDHEDSVMAVSFAHDSRRLASASDGGNVKIWDTRTGSLQNVLEG 429
Query: 619 HEDKIWALAVGKKTEMFATGGSDALVNLWHDST 651
H+D + +++ + + A+ D V +WH +T
Sbjct: 430 HDDCVNSVSFSPDSRLLASASDDRTVKIWHAAT 462
Score = 255 (94.8 bits), Expect = 8.2e-17, Sum P(2) = 8.2e-17
Identities = 75/289 (25%), Positives = 130/289 (44%)
Query: 333 TVEVPEKKMELILSKRLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVL 392
TV + E L L + + ++ + F + + LA A++ V+++D + S VL
Sbjct: 370 TVRIWETTTGL-LRHTFEDHEDSVMAVSF-AHDSRRLASASDGGNVKIWDTRTGSLQNVL 427
Query: 393 AGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKK 452
GH + C+++ + S L+ + S D +V++W + + GH V +V FS
Sbjct: 428 EGHDD---CVNSVSFSPDSRLLASASDDRTVKIWHAATGSLQRTLEGHNDWVRSVVFSHD 484
Query: 453 LQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTG 512
+ S S D T+K+W D A P+ ++ H + S+ + + L+ +
Sbjct: 485 -SRLIASASDDMTVKIW------DTATVPLQNNLES----HDNWVRSVVFSHDSRLLASA 533
Query: 513 SQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLK 572
S D T +W T GH + SV FSP +++ +AS D T+KIW + G+
Sbjct: 534 SDDMTVKIWDTATGSLENTLEGHDDRVNSVSFSPDSRLLASASDDGTVKIWYAATGTVQH 593
Query: 573 TFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYD-KHE 620
TF+G + +F + S DG VK+W + T+D HE
Sbjct: 594 TFDGSGRVAISLAFSHTSNLLASAMDDGTVKIWDMEIYSLRHTFDLDHE 642
Score = 248 (92.4 bits), Expect = 4.7e-16, Sum P(2) = 4.7e-16
Identities = 57/187 (30%), Positives = 93/187 (49%)
Query: 30 DGSFIACAC-GESINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWD 88
D +A A G ++ I D S+++ +EG D + +++ SPD +LL S+ R +++W
Sbjct: 400 DSRRLASASDGGNVKIWDTRTGSLQNVLEGHDDCVNSVSFSPDSRLLASASDDRTVKIWH 459
Query: 89 LSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVS 148
+T R+ +GH+ + L+A+A D V +WD + + H V
Sbjct: 460 AATGSLQRTLEGHNDWVRSVVFSHDSRLIASASDDMTVKIWDTATVPLQNNLESHDNWVR 519
Query: 149 SILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGR 208
S++F D+ LL S SDD TV++WD TL+ H RV S++ + D L SA
Sbjct: 520 SVVFSHDS--RLLASASDDMTVKIWDTATGSLENTLEGHDDRVNSVSFSPDSRLLASASD 577
Query: 209 DKVVNLW 215
D V +W
Sbjct: 578 DGTVKIW 584
Score = 248 (92.4 bits), Expect = 4.7e-16, Sum P(2) = 4.7e-16
Identities = 56/205 (27%), Positives = 100/205 (48%)
Query: 23 GPLVVSSDGSFIACACGE-SINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHS 81
G + S D +A A G+ ++ I D + + +++T+EG ++ + ++ S D +LL S+
Sbjct: 267 GSVSFSHDSRLLASASGDGTVKIWDTATSFLQNTLEGHNEWVKSVVFSHDSRLLASASDD 326
Query: 82 REIRVWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFK 141
+++WD +T R KGH+ + L+A+ DR V +W+ G H F+
Sbjct: 327 GTVKIWDTATGTLQRMLKGHNDSVRSVVFSHDSRLIASGSNDRTVRIWETTTGLLRHTFE 386
Query: 142 GHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGS 201
H+ V ++ F D+ + L S SD V++WD L+ H V S++ + D
Sbjct: 387 DHEDSVMAVSFAHDSRR--LASASDGGNVKIWDTRTGSLQNVLEGHDDCVNSVSFSPDSR 444
Query: 202 TLISAGRDKVVNLWDLRDYSCKLTV 226
L SA D+ V +W S + T+
Sbjct: 445 LLASASDDRTVKIWHAATGSLQRTL 469
Score = 248 (92.4 bits), Expect = 4.7e-16, Sum P(2) = 4.7e-16
Identities = 108/434 (24%), Positives = 181/434 (41%)
Query: 69 SPDDKLLFSSGHSREIRVWDLSTLKCL-------------RSWKGHDGPAIGMAC--HPS 113
S D LL S +W++S +KC +KGHD A+G H S
Sbjct: 217 SSDIDLLDVVEDSYRFALWNISGIKCAPLQVYASALLFSPAQFKGHDR-AVGSVSFSHDS 275
Query: 114 GGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVW 173
LLA+A D V +WD F + +GH V S++F D+ LL S SDD TV++W
Sbjct: 276 R-LLASASGDGTVKIWDTATSFLQNTLEGHNEWVKSVVFSHDS--RLLASASDDGTVKIW 332
Query: 174 DLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYEMVE 233
D L H V S+ + D + S D+ V +W+ + T +E +
Sbjct: 333 DTATGTLQRMLKGHNDSVRSVVFSHDSRLIASGSNDRTVRIWETTTGLLRHTFEDHE--D 390
Query: 234 AVCAIPPGSAFDS--FLSSYNQQTIKK-KRRSLEIHFITVGERGIVRM--WNADSACLYE 288
+V A+ A DS S+ + +K R+ + + G V ++ DS L
Sbjct: 391 SVMAV--SFAHDSRRLASASDGGNVKIWDTRTGSLQNVLEGHDDCVNSVSFSPDSRLL-A 447
Query: 289 QKSSDVTISF------EMDDSKRGFT--AATVLPSNQGLLCVTA--DQQLLLYTTVEVPE 338
S D T+ + + G +V+ S+ L +A D + ++ T VP
Sbjct: 448 SASDDRTVKIWHAATGSLQRTLEGHNDWVRSVVFSHDSRLIASASDDMTVKIWDTATVP- 506
Query: 339 KKMELILSKRLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEI 398
L L ++ + + F + + LA A++ V+++D ++ S L GH +
Sbjct: 507 ------LQNNLESHDNWVRSVVF-SHDSRLLASASDDMTVKIWDTATGSLENTLEGHDDR 559
Query: 399 VLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLV 458
V ++ + S L+ + S D +V++W + + G ++AFS N L
Sbjct: 560 V---NSVSFSPDSRLLASASDDGTVKIWYAATGTVQHTFDGSGRVAISLAFSHT-SNLLA 615
Query: 459 SGSSDHTIKVWSFD 472
S D T+K+W +
Sbjct: 616 SAMDDGTVKIWDME 629
Score = 247 (92.0 bits), Expect = 6.0e-16, Sum P(2) = 6.0e-16
Identities = 65/235 (27%), Positives = 109/235 (46%)
Query: 25 LVVSSDGSFIACACGE-SINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSRE 83
+V S D IA + ++ I + + ++ T E D++ A++ + D + L S+
Sbjct: 353 VVFSHDSRLIASGSNDRTVRIWETTTGLLRHTFEDHEDSVMAVSFAHDSRRLASASDGGN 412
Query: 84 IRVWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGH 143
+++WD T +GHD ++ P LLA+A DR V +W G +GH
Sbjct: 413 VKIWDTRTGSLQNVLEGHDDCVNSVSFSPDSRLLASASDDRTVKIWHAATGSLQRTLEGH 472
Query: 144 KGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTL 203
V S++F D+ L+ S SDD TV++WD L+ H + V S+ + D L
Sbjct: 473 NDWVRSVVFSHDS--RLIASASDDMTVKIWDTATVPLQNNLESHDNWVRSVVFSHDSRLL 530
Query: 204 ISAGRDKVVNLWDLRDYSCKLTVPTYE-MVEAVCAIPPGSAFDSFLSSYNQQTIK 257
SA D V +WD S + T+ ++ V +V + P S S+ + T+K
Sbjct: 531 ASASDDMTVKIWDTATGSLENTLEGHDDRVNSV-SFSPDSRL--LASASDDGTVK 582
Score = 246 (91.7 bits), Expect = 7.7e-16, Sum P(2) = 7.7e-16
Identities = 61/238 (25%), Positives = 112/238 (47%)
Query: 28 SSDGSFIACACGE-SINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRV 86
S D +A A + ++ I + S++ T+EG +D + ++ S D +L+ S+ +++
Sbjct: 440 SPDSRLLASASDDRTVKIWHAATGSLQRTLEGHNDWVRSVVFSHDSRLIASASDDMTVKI 499
Query: 87 WDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGV 146
WD +T+ + + HD + LLA+A D V +WD G + +GH
Sbjct: 500 WDTATVPLQNNLESHDNWVRSVVFSHDSRLLASASDDMTVKIWDTATGSLENTLEGHDDR 559
Query: 147 VSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISA 206
V+S+ F PD+ LL S SDD TV++W T D S+A + + L SA
Sbjct: 560 VNSVSFSPDS--RLLASASDDGTVKIWYAATGTVQHTFDGSGRVAISLAFSHTSNLLASA 617
Query: 207 GRDKVVNLWDLRDYSCKLTVPTYEMVEAVCAIPPGSAFDSFLSSYNQQTIKKKRRSLE 264
D V +WD+ YS + T+++ + I + S +++ + + + ++ E
Sbjct: 618 MDDGTVKIWDMEIYSLR---HTFDLDHEIQRIQFDKSMSSLITNVGRIQLDARSKATE 672
Score = 240 (89.5 bits), Expect = 3.4e-15, Sum P(2) = 3.4e-15
Identities = 93/385 (24%), Positives = 169/385 (43%)
Query: 57 EGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPSGGL 116
+G + +++ S D +LL S+ +++WD +T + +GH+ + L
Sbjct: 260 KGHDRAVGSVSFSHDSRLLASASGDGTVKIWDTATSFLQNTLEGHNEWVKSVVFSHDSRL 319
Query: 117 LATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLL 176
LA+A D V +WD G KGH V S++F D+ L+ SGS+D TVR+W+
Sbjct: 320 LASASDDGTVKIWDTATGTLQRMLKGHNDSVRSVVFSHDS--RLIASGSNDRTVRIWETT 377
Query: 177 AKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYE-MVEAV 235
T + H V +++ D L SA V +WD R S + + ++ V +V
Sbjct: 378 TGLLRHTFEDHEDSVMAVSFAHDSRRLASASDGGNVKIWDTRTGSLQNVLEGHDDCVNSV 437
Query: 236 CAIPPGSAFDSFLSSYNQQTIK-------KKRRSLEIHFITVGERGIVRMWNADSACLYE 288
+ P S S+ + +T+K +R+LE H V R +V ++ DS L
Sbjct: 438 -SFSPDSRL--LASASDDRTVKIWHAATGSLQRTLEGHNDWV--RSVV--FSHDSR-LIA 489
Query: 289 QKSSDVTISFEMDDSKRGFTAATVLPSNQGLLCVTA-DQQLLLYTTVEVPEKKMELI--- 344
S D+T+ D + N V + D +LL + ++ K +
Sbjct: 490 SASDDMTVKI-WDTATVPLQNNLESHDNWVRSVVFSHDSRLLASASDDMTVKIWDTATGS 548
Query: 345 LSKRLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDT 404
L L G+++ + + F + + LA A++ V+++ ++ + + G + + L
Sbjct: 549 LENTLEGHDDRVNSVSF-SPDSRLLASASDDGTVKIWYAATGTVQHTFDGSGRVAISL-- 605
Query: 405 CALSSGKILIVTGSKDNSVRLWDSE 429
A S L+ + D +V++WD E
Sbjct: 606 -AFSHTSNLLASAMDDGTVKIWDME 629
Score = 202 (76.2 bits), Expect = 4.1e-11, Sum P(2) = 4.1e-11
Identities = 53/223 (23%), Positives = 105/223 (47%)
Query: 446 AVAFSKKLQNFLVSGSSD----------HTIKVWSFDGLSDDAEQPMNLKAKAVVAA--- 492
A++ ++L+ F+ SSD + +W+ G+ P+ + A A++ +
Sbjct: 202 ALSSMQRLERFIRKRSSDIDLLDVVEDSYRFALWNISGIKC---APLQVYASALLFSPAQ 258
Query: 493 ---HGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQ 549
H + + S++ + + L+ + S D T +W T GH + SV FS +
Sbjct: 259 FKGHDRAVGSVSFSHDSRLLASASGDGTVKIWDTATSFLQNTLEGHNEWVKSVVFSHDSR 318
Query: 550 VVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGA-DGLVKLWTVR 608
++ +AS D T+KIW + G+ + +GH SV R+ + +++++ G+ D V++W
Sbjct: 319 LLASASDDGTVKIWDTATGTLQRMLKGHNDSV-RSVVFSHDSRLIASGSNDRTVRIWETT 377
Query: 609 TGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLWHDST 651
TG T++ HED + A++ + A+ V +W T
Sbjct: 378 TGLLRHTFEDHEDSVMAVSFAHDSRRLASASDGGNVKIWDTRT 420
Score = 45 (20.9 bits), Expect = 1.1e-21, Sum P(2) = 1.1e-21
Identities = 11/39 (28%), Positives = 21/39 (53%)
Query: 668 RGQELENAVLDADYTK-AIQVAFELRRPHKLFELFASVC 705
+G+E+ +A+ D + IQ +++ PH+L E C
Sbjct: 1439 KGKEVPSALDTTDVLENIIQDRSQIKEPHQLAESIICKC 1477
>UNIPROTKB|F1RG42 [details] [associations]
symbol:TAF5L "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043966 "histone H3 acetylation" evidence=IEA]
[GO:0033276 "transcription factor TFTC complex" evidence=IEA]
[GO:0030914 "STAGA complex" evidence=IEA] [GO:0004402 "histone
acetyltransferase activity" evidence=IEA] [GO:0003713
"transcription coactivator activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003713 GO:GO:0043966
GO:GO:0004402 GO:GO:0030914 GO:GO:0033276
GeneTree:ENSGT00700000104377 CTD:27097 KO:K03130 OMA:YVDSEGP
EMBL:CU468504 RefSeq:XP_001927989.1 ProteinModelPortal:F1RG42
Ensembl:ENSSSCT00000011153 GeneID:100155476 KEGG:ssc:100155476
Uniprot:F1RG42
Length = 589
Score = 276 (102.2 bits), Expect = 1.1e-21, Sum P(2) = 1.1e-21
Identities = 71/246 (28%), Positives = 115/246 (46%)
Query: 391 VLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFS 450
VL GH V A SSG +++ S+D S+R WD S + GH V V S
Sbjct: 337 VLRGHCGPVYSTRFLADSSG---LLSCSEDMSIRYWDLGSFTNTVLYQGHAYPVWDVDIS 393
Query: 451 KKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVC 510
+ SGS D T ++WSFD P+ + A H D++ + PN + +
Sbjct: 394 P-YSLYFASGSHDRTARLWSFD-----RTYPLR-----IYAGHLADVDCVKFHPNSNYLA 442
Query: 511 TGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSC 570
TGS D+T +W SV F GH+ + S+ FSP + + +A D+ +K+W ++ G+
Sbjct: 443 TGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGTL 502
Query: 571 LKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGK 630
K GHT ++ +F + I S D V++W +R C A D ++ + G+
Sbjct: 503 FKELRGHTDNITSLTFSPDSSLIASASMDNSVRVWDIRNTHCSAPTDGSSSELVGVYTGQ 562
Query: 631 KTEMFA 636
+ + +
Sbjct: 563 MSNVLS 568
Score = 245 (91.3 bits), Expect = 2.2e-17, P = 2.2e-17
Identities = 61/202 (30%), Positives = 95/202 (47%)
Query: 29 SDGS-FIACACGESINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSG-HSREIRV 86
+D S ++C+ SI DL + + +G + + + +SP L F+SG H R R+
Sbjct: 352 ADSSGLLSCSEDMSIRYWDLGSFTNTVLYQGHAYPVWDVDISPYS-LYFASGSHDRTARL 410
Query: 87 WDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGV 146
W LR + GH + HP+ LAT D+ V +W G F GH+G
Sbjct: 411 WSFDRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQQGNSVRLFTGHRGP 470
Query: 147 VSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISA 206
V S+ F P+ L S +D +++WDL + L H +TS+ + D S + SA
Sbjct: 471 VLSLAFSPNG--KYLASAGEDQRLKLWDLASGTLFKELRGHTDNITSLTFSPDSSLIASA 528
Query: 207 GRDKVVNLWDLRDYSCKLTVPT 228
D V +WD+R+ C + PT
Sbjct: 529 SMDNSVRVWDIRNTHC--SAPT 548
Score = 230 (86.0 bits), Expect = 1.6e-16, Sum P(2) = 1.6e-16
Identities = 55/209 (26%), Positives = 89/209 (42%)
Query: 439 GHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDIN 498
GH G V + F L+S S D +I+ W ++ + H +
Sbjct: 340 GHCGPVYSTRFLADSSG-LLSCSEDMSIRYWDLGSFTNTV----------LYQGHAYPVW 388
Query: 499 SLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDK 558
+ ++P +GS DRTA +W + + GH + V+F P + T S DK
Sbjct: 389 DVDISPYSLYFASGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDK 448
Query: 559 TIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDK 618
T+++WS G+ ++ F GH VL +F G + S G D +KLW + +G
Sbjct: 449 TVRLWSAQQGNSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGTLFKELRG 508
Query: 619 HEDKIWALAVGKKTEMFATGGSDALVNLW 647
H D I +L + + A+ D V +W
Sbjct: 509 HTDNITSLTFSPDSSLIASASMDNSVRVW 537
Score = 200 (75.5 bits), Expect = 1.9e-12, P = 1.9e-12
Identities = 43/143 (30%), Positives = 73/143 (51%)
Query: 63 ITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGA 122
+ + P+ L + + +R+W +R + GH GP + +A P+G LA+AG
Sbjct: 429 VDCVKFHPNSNYLATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLAFSPNGKYLASAGE 488
Query: 123 DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVA 182
D+++ +WD+ G +GH ++S+ F PD+ SL+ S S D +VRVWD+ C A
Sbjct: 489 DQRLKLWDLASGTLFKELRGHTDNITSLTFSPDS--SLIASASMDNSVRVWDIRNTHCSA 546
Query: 183 TLDKHFSRVTSMAITSDGSTLIS 205
D S + + T S ++S
Sbjct: 547 PTDGSSSELVGV-YTGQMSNVLS 568
Score = 194 (73.4 bits), Expect = 8.6e-12, P = 8.6e-12
Identities = 51/184 (27%), Positives = 76/184 (41%)
Query: 34 IACACGESINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLK 93
+AC E + D + + G + + D L S IR WDL +
Sbjct: 316 LACDILEEEDDEDDDVGTEMKVLRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDLGSFT 375
Query: 94 CLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFH 153
++GH P + P A+ DR +W D + + GH V + FH
Sbjct: 376 NTVLYQGHAYPVWDVDISPYSLYFASGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFH 435
Query: 154 PDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVN 213
P+++ L +GS D TVR+W V H V S+A + +G L SAG D+ +
Sbjct: 436 PNSN--YLATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLK 493
Query: 214 LWDL 217
LWDL
Sbjct: 494 LWDL 497
Score = 188 (71.2 bits), Expect = 6.9e-12, Sum P(2) = 6.9e-12
Identities = 41/172 (23%), Positives = 75/172 (43%)
Query: 476 DDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGH 535
DD + + + K V+ H + S + S + + S+D + W L + V ++GH
Sbjct: 325 DDEDDDVGTEMK-VLRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDLGSFTNTVLYQGH 383
Query: 536 KRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVS 595
+W V+ SP + S D+T ++WS L+ + GH + V F + +
Sbjct: 384 AYPVWDVDISPYSLYFASGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLAT 443
Query: 596 CGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLW 647
D V+LW+ + G + + H + +LA + A+ G D + LW
Sbjct: 444 GSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLW 495
Score = 122 (48.0 bits), Expect = 0.00058, P = 0.00058
Identities = 26/86 (30%), Positives = 44/86 (51%)
Query: 25 LVVSSDGSFIACACGES--INIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSR 82
L S +G ++A A GE + + DL++ ++ + G +D IT+L SPD L+ S+
Sbjct: 474 LAFSPNGKYLASA-GEDQRLKLWDLASGTLFKELRGHTDNITSLTFSPDSSLIASASMDN 532
Query: 83 EIRVWDLSTLKCLRSWKGHDGPAIGM 108
+RVWD+ C G +G+
Sbjct: 533 SVRVWDIRNTHCSAPTDGSSSELVGV 558
Score = 112 (44.5 bits), Expect = 2.8e-08, Sum P(2) = 2.8e-08
Identities = 39/116 (33%), Positives = 57/116 (49%)
Query: 346 SKRL-VGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDT 404
S RL G+ +L L F +YLA A ++++++DL+S + L GH++ + L
Sbjct: 460 SVRLFTGHRGPVLSLAF-SPNGKYLASAGEDQRLKLWDLASGTLFKELRGHTDNITSL-- 516
Query: 405 CALSSGKILIVTGSKDNSVRLWDSESRCC-----------VGVGTGHMGAVGAVAF 449
S LI + S DNSVR+WD + C VGV TG M V +V F
Sbjct: 517 -TFSPDSSLIASASMDNSVRVWDIRNTHCSAPTDGSSSELVGVYTGQMSNVLSVQF 571
Score = 99 (39.9 bits), Expect = 2.8e-08, Sum P(2) = 2.8e-08
Identities = 51/210 (24%), Positives = 81/210 (38%)
Query: 68 LSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVL 127
+SP+ KLL + + I++W L + K D I +AC +L +
Sbjct: 276 ISPESKLLAAGFDNSCIKLWSLRSKKLKPEPHRVDVSRIHLACD----ILEEEDDE---- 327
Query: 128 VWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKH 187
D D G +GH G V S F D+ S L S S+D ++R WDL + H
Sbjct: 328 --DDDVGTEMKVLRGHCGPVYSTRFLADS--SGLLSCSEDMSIRYWDLGSFTNTVLYQGH 383
Query: 188 FSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYEMVEAVCA-IPPGSAFDS 246
V + I+ S D+ LW D + L + + + C P S + +
Sbjct: 384 AYPVWDVDISPYSLYFASGSHDRTARLWSF-DRTYPLRIYAGHLADVDCVKFHPNSNYLA 442
Query: 247 FLSSYNQQTIKKKRRSLEIHFITVGERGIV 276
S+ + ++ + T G RG V
Sbjct: 443 TGSTDKTVRLWSAQQGNSVRLFT-GHRGPV 471
Score = 54 (24.1 bits), Expect = 1.1e-21, Sum P(2) = 1.1e-21
Identities = 11/44 (25%), Positives = 26/44 (59%)
Query: 136 CTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKK 179
C + F + ++++ P++ LL +G D++ +++W L +KK
Sbjct: 260 CFYAFYNTEQLLNTAEISPES--KLLAAGFDNSCIKLWSLRSKK 301
Score = 44 (20.5 bits), Expect = 1.7e-15, Sum P(2) = 1.7e-15
Identities = 10/44 (22%), Positives = 20/44 (45%)
Query: 388 CSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESR 431
C Y ++ L+T +S L+ G ++ ++LW S+
Sbjct: 260 CFYAFYNTEQL---LNTAEISPESKLLAAGFDNSCIKLWSLRSK 300
Score = 38 (18.4 bits), Expect = 3.1e-10, Sum P(2) = 3.1e-10
Identities = 7/17 (41%), Positives = 11/17 (64%)
Query: 452 KLQNFLVSGSSDHTIKV 468
+L+NFL S H+ +V
Sbjct: 76 RLRNFLTDSDSQHSHEV 92
>ZFIN|ZDB-GENE-040426-1993 [details] [associations]
symbol:poc1a "POC1 centriolar protein homolog A
(Chlamydomonas)" species:7955 "Danio rerio" [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0030030 "cell projection organization"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-1993 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030030 HSSP:P16649
CTD:25886 HOVERGEN:HBG057502 KO:K16482 EMBL:BC045888
IPI:IPI00500664 RefSeq:NP_998214.1 UniGene:Dr.150982
ProteinModelPortal:Q7ZVF0 GeneID:406322 KEGG:dre:406322
NextBio:20817946 Uniprot:Q7ZVF0
Length = 416
Score = 277 (102.6 bits), Expect = 1.2e-21, P = 1.2e-21
Identities = 78/304 (25%), Positives = 138/304 (45%)
Query: 345 LSKRLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDT 404
L + G+ + I L F +Q +A + V V+++ S +Y GH + V C+
Sbjct: 10 LERNFKGHRDAITSLDFSPSGKQ-IASGSVDASVMVWNMKPQSRAYRFTGHKDAVTCVQ- 67
Query: 405 CALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDH 464
S L+ + S+D +VRLW + + H G+V +V FS Q+ L++ S D
Sbjct: 68 --FSPSAHLLASSSRDKTVRLWVPSVKGESVLFRAHTGSVRSVCFSADGQS-LLTASDDQ 124
Query: 465 TIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLP 524
+IK+WS K + H + +P+ L+ + S DRT +W
Sbjct: 125 SIKLWSVH----------RQKIICTLREHNNWVRCARFSPDGQLMVSVSDDRTVKLWDAS 174
Query: 525 DLVSVVTFRGHKRGIWS-VEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLR 583
+ TF G S V+F P + TAS D T+++W I + L+ ++ H+++V
Sbjct: 175 SRQLIHTFC-EPGGYSSYVDFHPSSTCIATASSDNTVRVWDIRTHTLLQHYQVHSAAVNA 233
Query: 584 ASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDAL 643
SF G +++ +D +K+ + G + T H+ ++ + + FA+ GSD
Sbjct: 234 LSFHPSGNHLLTASSDSTLKILDLLEGRLLYTLHGHQGSASCVSFSRSGDQFASAGSDQQ 293
Query: 644 VNLW 647
V +W
Sbjct: 294 VMVW 297
Score = 232 (86.7 bits), Expect = 2.2e-16, P = 2.2e-16
Identities = 60/216 (27%), Positives = 107/216 (49%)
Query: 13 EPVLQQFYGGGPLVV--SSDG-SFIACACGESINIVDLSNASIKSTIEGGSDTITALALS 69
E VL + + G V S+DG S + + +SI + + I T+ ++ + S
Sbjct: 94 ESVLFRAHTGSVRSVCFSADGQSLLTASDDQSIKLWSVHRQKIICTLREHNNWVRCARFS 153
Query: 70 PDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVW 129
PD +L+ S R +++WD S+ + + ++ G + + HPS +ATA +D V VW
Sbjct: 154 PDGQLMVSVSDDRTVKLWDASSRQLIHTFCEPGGYSSYVDFHPSSTCIATASSDNTVRVW 213
Query: 130 DVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFS 189
D+ +++ H V+++ FHP + L + S D+T+++ DLL + + TL H
Sbjct: 214 DIRTHTLLQHYQVHSAAVNALSFHPSGNH--LLTASSDSTLKILDLLEGRLLYTLHGHQG 271
Query: 190 RVTSMAITSDGSTLISAGRDKVVNLW----DLRDYS 221
+ ++ + G SAG D+ V +W D DYS
Sbjct: 272 SASCVSFSRSGDQFASAGSDQQVMVWRTNFDSVDYS 307
Score = 214 (80.4 bits), Expect = 2.3e-14, P = 2.3e-14
Identities = 51/172 (29%), Positives = 85/172 (49%)
Query: 47 LSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAI 106
L + +++ +G D IT+L SP K + S + VW++ + GH
Sbjct: 5 LDDPTLERNFKGHRDAITSLDFSPSGKQIASGSVDASVMVWNMKPQSRAYRFTGHKDAVT 64
Query: 107 GMACHPSGGLLATAGADRKVLVW--DVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSG 164
+ PS LLA++ D+ V +W V G + F+ H G V S+ F D +SLL +
Sbjct: 65 CVQFSPSAHLLASSSRDKTVRLWVPSVKGE--SVLFRAHTGSVRSVCFSAD-GQSLL-TA 120
Query: 165 SDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWD 216
SDD ++++W + +K + TL +H + V + DG ++S D+ V LWD
Sbjct: 121 SDDQSIKLWSVHRQKIICTLREHNNWVRCARFSPDGQLMVSVSDDRTVKLWD 172
Score = 204 (76.9 bits), Expect = 3.1e-13, P = 3.1e-13
Identities = 46/161 (28%), Positives = 75/161 (46%)
Query: 493 HGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVI 552
H I SL +P+ + +GS D + VW + F GHK + V+FSP ++
Sbjct: 17 HRDAITSLDFSPSGKQIASGSVDASVMVWNMKPQSRAYRFTGHKDAVTCVQFSPSAHLLA 76
Query: 553 TASGDKTIKIW--SISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTG 610
++S DKT+++W S+ S L F HT SV F G +++ D +KLW+V
Sbjct: 77 SSSRDKTVRLWVPSVKGESVL--FRAHTGSVRSVCFSADGQSLLTASDDQSIKLWSVHRQ 134
Query: 611 ECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLWHDST 651
+ I T +H + + ++ + D V LW S+
Sbjct: 135 KIICTLREHNNWVRCARFSPDGQLMVSVSDDRTVKLWDASS 175
Score = 176 (67.0 bits), Expect = 4.0e-10, P = 4.0e-10
Identities = 62/254 (24%), Positives = 107/254 (42%)
Query: 13 EPVLQQ-FYGGGPLVVSSD----GSFIACACGE-SINIVDLSNASIKSTIEGGSDTITAL 66
+P L++ F G + S D G IA + S+ + ++ S G D +T +
Sbjct: 7 DPTLERNFKGHRDAITSLDFSPSGKQIASGSVDASVMVWNMKPQSRAYRFTGHKDAVTCV 66
Query: 67 ALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKV 126
SP LL SS + +R+W S ++ H G + G L TA D+ +
Sbjct: 67 QFSPSAHLLASSSRDKTVRLWVPSVKGESVLFRAHTGSVRSVCFSADGQSLLTASDDQSI 126
Query: 127 LVWDVDGG--FCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATL 184
+W V CT + H V F PD L+ S SDD TV++WD +++ + T
Sbjct: 127 KLWSVHRQKIICT--LREHNNWVRCARFSPDGQ--LMVSVSDDRTVKLWDASSRQLIHTF 182
Query: 185 DKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYEM-VEAVCAIPPGSA 243
+ + + + + +A D V +WD+R ++ + V A+ P G+
Sbjct: 183 CEPGGYSSYVDFHPSSTCIATASSDNTVRVWDIRTHTLLQHYQVHSAAVNALSFHPSGN- 241
Query: 244 FDSFLSSYNQQTIK 257
L++ + T+K
Sbjct: 242 --HLLTASSDSTLK 253
>CGD|CAL0000105 [details] [associations]
symbol:orf19.1672 species:5476 "Candida albicans" [GO:0030126
"COPI vesicle coat" evidence=IEA] [GO:0043130 "ubiquitin binding"
evidence=IEA] [GO:0006890 "retrograde vesicle-mediated transport,
Golgi to ER" evidence=IEA] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR010714
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053 Pfam:PF06957
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 CGD:CAL0000105
GO:GO:0006886 GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005198 InterPro:IPR020472
PRINTS:PR00320 EMBL:AACQ01000013 GO:GO:0030126 KO:K05236
InterPro:IPR016391 PIRSF:PIRSF003354 RefSeq:XP_721749.1
ProteinModelPortal:Q5AJP8 STRING:Q5AJP8 GeneID:3636601
KEGG:cal:CaO19.1672 Uniprot:Q5AJP8
Length = 1221
Score = 195 (73.7 bits), Expect = 1.3e-21, Sum P(2) = 1.3e-21
Identities = 47/172 (27%), Positives = 74/172 (43%)
Query: 57 EGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPSGGL 116
E S +A P S HS I++WD + ++ H GP + HP+ L
Sbjct: 8 ESKSSRAKGVAFHPKRPWALVSLHSSTIQLWDYRMGTLIDRFEDHVGPVRSVDFHPTQPL 67
Query: 117 LATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLL 176
+ G D + VW ++ C GH + + FH D + S SDD T+R+W+
Sbjct: 68 FVSGGDDYTIKVWSLNTRKCIFTLNGHLDYIRGVSFHHDLP--WIISCSDDQTIRIWNWQ 125
Query: 177 AKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPT 228
++ +A L H V S ++SA D+ V +WD+ K + PT
Sbjct: 126 NRQEIACLTGHNHYVMSAQFHPSEDLIVSASLDQTVRVWDISGLRKKHSAPT 177
Score = 173 (66.0 bits), Expect = 3.1e-19, Sum P(2) = 3.1e-19
Identities = 37/125 (29%), Positives = 60/125 (48%)
Query: 92 LKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSIL 151
+K L ++ A G+A HP + + +WD G F+ H G V S+
Sbjct: 1 MKMLTKFESKSSRAKGVAFHPKRPWALVSLHSSTIQLWDYRMGTLIDRFEDHVGPVRSVD 60
Query: 152 FHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKV 211
FHP + L SG DD T++VW L +KC+ TL+ H + ++ D +IS D+
Sbjct: 61 FHPT--QPLFVSGGDDYTIKVWSLNTRKCIFTLNGHLDYIRGVSFHHDLPWIISCSDDQT 118
Query: 212 VNLWD 216
+ +W+
Sbjct: 119 IRIWN 123
Score = 158 (60.7 bits), Expect = 1.9e-07, P = 1.9e-07
Identities = 43/161 (26%), Positives = 73/161 (45%)
Query: 421 NSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQ 480
++++LWD + H+G V +V F Q VSG D+TIKVWS +
Sbjct: 33 STIQLWDYRMGTLIDRFEDHVGPVRSVDFHPT-QPLFVSGGDDYTIKVWSLN-------- 83
Query: 481 PMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIW 540
K + H I ++ + + + S D+T +W + + GH +
Sbjct: 84 --TRKCIFTLNGHLDYIRGVSFHHDLPWIISCSDDQTIRIWNWQNRQEIACLTGHNHYVM 141
Query: 541 SVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSV 581
S +F P + ++++AS D+T+++W IS K TSSV
Sbjct: 142 SAQFHPSEDLIVSASLDQTVRVWDIS--GLRKKHSAPTSSV 180
Score = 152 (58.6 bits), Expect = 5.6e-17, Sum P(2) = 5.6e-17
Identities = 41/141 (29%), Positives = 62/141 (43%)
Query: 41 SINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKG 100
+I + D ++ E + ++ P L S G I+VW L+T KC+ + G
Sbjct: 34 TIQLWDYRMGTLIDRFEDHVGPVRSVDFHPTQPLFVSGGDDYTIKVWSLNTRKCIFTLNG 93
Query: 101 HDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSL 160
H G++ H + + D+ + +W+ GH V S FHP D L
Sbjct: 94 HLDYIRGVSFHHDLPWIISCSDDQTIRIWNWQNRQEIACLTGHNHYVMSAQFHPSED--L 151
Query: 161 LFSGSDDATVRVWDL--LAKK 179
+ S S D TVRVWD+ L KK
Sbjct: 152 IVSASLDQTVRVWDISGLRKK 172
Score = 149 (57.5 bits), Expect = 1.3e-21, Sum P(2) = 1.3e-21
Identities = 44/185 (23%), Positives = 78/185 (42%)
Query: 454 QNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGS 513
++ +VS S D T++VW GL P + V A + + D G+
Sbjct: 149 EDLIVSASLDQTVRVWDISGLRKKHSAPTSS-----VRAFEDQLQRQQLPQQDIF---GN 200
Query: 514 QDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSC--L 571
+ +V V GH +G+ F P ++++A D+ +K+W +SD +
Sbjct: 201 ---------INAVVKYV-LEGHDKGVNYASFHPTLPLIVSAGDDRVVKLWRMSDTKAWEV 250
Query: 572 KTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKK 631
T GHT +VL A F I+S D +++W + + + + D+ W +A
Sbjct: 251 DTCRGHTGNVLSAIFHPHQDLILSVSDDKTIRVWDLNKRVPVKQFRREHDRFWLIASHPT 310
Query: 632 TEMFA 636
+FA
Sbjct: 311 ISLFA 315
Score = 147 (56.8 bits), Expect = 2.9e-06, P = 2.9e-06
Identities = 31/127 (24%), Positives = 56/127 (44%)
Query: 521 WRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSS 580
+R+ L+ F H + SV+F P + ++ D TIK+WS++ C+ T GH
Sbjct: 40 YRMGTLID--RFEDHVGPVRSVDFHPTQPLFVSGGDDYTIKVWSLNTRKCIFTLNGHLDY 97
Query: 581 VLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGS 640
+ SF I+SC D +++W + + IA H + + ++ +
Sbjct: 98 IRGVSFHHDLPWIISCSDDQTIRIWNWQNRQEIACLTGHNHYVMSAQFHPSEDLIVSASL 157
Query: 641 DALVNLW 647
D V +W
Sbjct: 158 DQTVRVW 164
Score = 139 (54.0 bits), Expect = 1.4e-20, Sum P(2) = 1.4e-20
Identities = 36/124 (29%), Positives = 58/124 (46%)
Query: 482 MNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVS--VVTFRGHKRGI 539
+N K V+ H K +N + P L+ + DR +WR+ D + V T RGH +
Sbjct: 201 INAVVKYVLEGHDKGVNYASFHPTLPLIVSAGDDRVVKLWRMSDTKAWEVDTCRGHTGNV 260
Query: 540 WSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEG-HTSSVLRASFLTRGAQIVSCGA 598
S F P ++++ S DKTI++W ++ +K F H L AS T +C
Sbjct: 261 LSAIFHPHQDLILSVSDDKTIRVWDLNKRVPVKQFRREHDRFWLIASHPTISL-FAACHD 319
Query: 599 DGLV 602
G++
Sbjct: 320 SGIM 323
Score = 138 (53.6 bits), Expect = 4.4e-05, Sum P(3) = 4.4e-05
Identities = 43/186 (23%), Positives = 78/186 (41%)
Query: 34 IACACGESINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLK 93
I+C+ ++I I + N + + G + + + P + L+ S+ + +RVWD+S L+
Sbjct: 111 ISCSDDQTIRIWNWQNRQEIACLTGHNHYVMSAQFHPSEDLIVSASLDQTVRVWDISGLR 170
Query: 94 CLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFH 153
K H P + L ++ + +++ + +GH V+ FH
Sbjct: 171 -----KKHSAPTSSVRAFEDQ--LQRQQLPQQDIFGNINA-VVKYVLEGHDKGVNYASFH 222
Query: 154 PDTDKSLLFSGSDDATVRVWDLLAKKC--VATLDKHFSRVTSMAITSDGSTLISAGRDKV 211
P L+ S DD V++W + K V T H V S ++S DK
Sbjct: 223 PTLP--LIVSAGDDRVVKLWRMSDTKAWEVDTCRGHTGNVLSAIFHPHQDLILSVSDDKT 280
Query: 212 VNLWDL 217
+ +WDL
Sbjct: 281 IRVWDL 286
Score = 134 (52.2 bits), Expect = 7.4e-05, P = 7.4e-05
Identities = 39/151 (25%), Positives = 61/151 (40%)
Query: 460 GSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAA---HGKDINSLAVAPNDSLVCTGSQDR 516
G + H + W+ L Q + + ++ H + S+ P L +G D
Sbjct: 16 GVAFHPKRPWALVSLHSSTIQLWDYRMGTLIDRFEDHVGPVRSVDFHPTQPLFVSGGDDY 75
Query: 517 TACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEG 576
T VW L + T GH I V F +I+ S D+TI+IW+ + + G
Sbjct: 76 TIKVWSLNTRKCIFTLNGHLDYIRGVSFHHDLPWIISCSDDQTIRIWNWQNRQEIACLTG 135
Query: 577 HTSSVLRASFLTRGAQIVSCGADGLVKLWTV 607
H V+ A F IVS D V++W +
Sbjct: 136 HNHYVMSAQFHPSEDLIVSASLDQTVRVWDI 166
Score = 129 (50.5 bits), Expect = 0.00026, P = 0.00026
Identities = 30/114 (26%), Positives = 56/114 (49%)
Query: 413 LIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFD 472
L V+G D ++++W +R C+ GH+ + V+F L +++S S D TI++W++
Sbjct: 67 LFVSGGDDYTIKVWSLNTRKCIFTLNGHLDYIRGVSFHHDLP-WIISCSDDQTIRIWNWQ 125
Query: 473 GLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDL 526
N + A + H + S P++ L+ + S D+T VW + L
Sbjct: 126 ----------NRQEIACLTGHNHYVMSAQFHPSEDLIVSASLDQTVRVWDISGL 169
Score = 128 (50.1 bits), Expect = 0.00048, Sum P(3) = 0.00048
Identities = 45/188 (23%), Positives = 76/188 (40%)
Query: 33 FIACACGESINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTL 92
F++ +I + L+ T+ G D I ++ D + S + IR+W+
Sbjct: 68 FVSGGDDYTIKVWSLNTRKCIFTLNGHLDYIRGVSFHHDLPWIISCSDDQTIRIWNWQNR 127
Query: 93 KCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSI-L 151
+ + GH+ + HPS L+ +A D+ V VWD+ G K H SS+
Sbjct: 128 QEIACLTGHNHYVMSAQFHPSEDLIVSASLDQTVRVWDISG-----LRKKHSAPTSSVRA 182
Query: 152 FHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKV 211
F + L D + + + K L+ H V + ++SAG D+V
Sbjct: 183 FEDQLQRQQL--PQQDIFGNI-NAVVKY---VLEGHDKGVNYASFHPTLPLIVSAGDDRV 236
Query: 212 VNLWDLRD 219
V LW + D
Sbjct: 237 VKLWRMSD 244
Score = 116 (45.9 bits), Expect = 3.7e-12, Sum P(2) = 3.7e-12
Identities = 27/104 (25%), Positives = 52/104 (50%)
Query: 378 VQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVG 437
++V+ L++ C + L GH + + + + I++ S D ++R+W+ ++R +
Sbjct: 77 IKVWSLNTRKCIFTLNGHLDYIRGV---SFHHDLPWIISCSDDQTIRIWNWQNRQEIACL 133
Query: 438 TGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQP 481
TGH V + F ++ +VS S D T++VW GL P
Sbjct: 134 TGHNHYVMSAQFHPS-EDLIVSASLDQTVRVWDISGLRKKHSAP 176
Score = 107 (42.7 bits), Expect = 7.2e-15, Sum P(2) = 7.2e-15
Identities = 48/203 (23%), Positives = 78/203 (38%)
Query: 513 SQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLK 572
S D+T +W + + GH + S +F P + ++++AS D+T+++W IS K
Sbjct: 114 SDDQTIRIWNWQNRQEIACLTGHNHYVMSAQFHPSEDLIVSASLDQTVRVWDIS--GLRK 171
Query: 573 TFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKT 632
TSSV + Q+ G + V+ + H+ + +
Sbjct: 172 KHSAPTSSVRAFEDQLQRQQLPQQDIFGNINA-VVKY-----VLEGHDKGVNYASFHPTL 225
Query: 633 EMFATGGSDALVNLWHDS-TXXXXXXXXXXXXXXVLRG-----QELENAVLDA------D 680
+ + G D +V LW S T VL Q+L +V D D
Sbjct: 226 PLIVSAGDDRVVKLWRMSDTKAWEVDTCRGHTGNVLSAIFHPHQDLILSVSDDKTIRVWD 285
Query: 681 YTKAIQVAFELRRPHKLFELFAS 703
K + V + RR H F L AS
Sbjct: 286 LNKRVPVK-QFRREHDRFWLIAS 307
Score = 88 (36.0 bits), Expect = 2.9e-15, Sum P(2) = 2.9e-15
Identities = 29/100 (29%), Positives = 47/100 (47%)
Query: 375 IEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWD-SESRCC 433
+ Q ++ + YVL GH + V + + LIV+ D V+LW S+++
Sbjct: 192 LPQQDIFGNINAVVKYVLEGHDKGV---NYASFHPTLPLIVSAGDDRVVKLWRMSDTKAW 248
Query: 434 -VGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFD 472
V GH G V + F Q+ ++S S D TI+VW +
Sbjct: 249 EVDTCRGHTGNVLSAIFHPH-QDLILSVSDDKTIRVWDLN 287
Score = 47 (21.6 bits), Expect = 4.4e-11, Sum P(3) = 4.4e-11
Identities = 23/70 (32%), Positives = 34/70 (48%)
Query: 446 AVAFSKKLQNFL-VSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGK-DINSLAVA 503
A+ S K +N+ S ++ +K+ + G AEQ M LK KA A+ +IN A
Sbjct: 1108 AMTQSFKNKNYASASYFAEELLKISNNSG--PRAEQAMKLKNKADTIANDTIEINFDPFA 1165
Query: 504 PNDSLVCTGS 513
D +C GS
Sbjct: 1166 EFD--ICCGS 1173
Score = 46 (21.3 bits), Expect = 4.4e-11, Sum P(3) = 4.4e-11
Identities = 8/19 (42%), Positives = 13/19 (68%)
Query: 413 LIVTGSKDNSVRLWDSESR 431
LI++ S D ++R+WD R
Sbjct: 271 LILSVSDDKTIRVWDLNKR 289
Score = 38 (18.4 bits), Expect = 9.6e-06, Sum P(3) = 9.6e-06
Identities = 8/20 (40%), Positives = 11/20 (55%)
Query: 175 LLAKKCVATLDKHFSRVTSM 194
LL+K + DK +TSM
Sbjct: 516 LLSKHTITIADKDLKLITSM 535
>UNIPROTKB|I3LSG8 [details] [associations]
symbol:I3LSG8 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043531 "ADP binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR002182 InterPro:IPR015943
Pfam:PF00400 Pfam:PF00931 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043531
GeneTree:ENSGT00700000104017 ProteinModelPortal:I3LSG8
Ensembl:ENSSSCT00000028858 OMA:LRERVAC Uniprot:I3LSG8
Length = 994
Score = 180 (68.4 bits), Expect = 1.5e-21, Sum P(3) = 1.5e-21
Identities = 46/179 (25%), Positives = 82/179 (45%)
Query: 40 ESINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWK 99
E IN ++ N S + + +D + S D + + S G + ++V+ T + L K
Sbjct: 332 EWINKKNIKNLS-RLVVRPHTDAVYHACFSEDGQRIASCGADKTLQVFKAETGEKLLEIK 390
Query: 100 GHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKS 159
H+ + A +AT D+KV +W+ G + H V+ F +++
Sbjct: 391 AHEDEVLCCAFSADDRFIATCSVDKKVKIWNSVTGELVQSYDEHSEQVNCCHFTNNSNHL 450
Query: 160 LLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLR 218
LL +GS D +++WDL K+C T+ H + V+ + D L S D + LWD++
Sbjct: 451 LLATGSSDYFLKLWDLNQKECRNTMFGHTNSVSHCRFSPDDKLLASCSADGTLKLWDVK 509
Score = 168 (64.2 bits), Expect = 1.5e-21, Sum P(3) = 1.5e-21
Identities = 62/215 (28%), Positives = 103/215 (47%)
Query: 414 IVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDG 473
+++ S D+++++W+ +S V + H V K + L+S S D T+KVW+
Sbjct: 763 VISSSDDSAIQVWNWQSEETVSL-QAHQETVKDFRLLKNSR--LLSWSFDGTVKVWNI-- 817
Query: 474 LSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVV-TF 532
++ E+ H + S ++P+ + + S D+TA +W DL+S +
Sbjct: 818 ITGRIEKDF--------VCHQDTVLSCDISPDATKFSSTSADKTAKIWSF-DLLSPLHEL 868
Query: 533 RGHKRGIWSVEFSPVDQVVITASGDKT--IKIWSISDG----SCLKTF-EG----HTSSV 581
RGHK + FS VD ++ A+GD I+IW++S+G SC EG H V
Sbjct: 869 RGHKGCVRCSAFS-VDSTLL-ATGDDNGEIRIWNVSNGELLHSCAPVLVEGGAATHGGWV 926
Query: 582 LRASFLTRGAQIVSCGADGLVKLWTVRTGECIATY 616
F G +VS G G +K W V +G+ I T+
Sbjct: 927 TDLRFSPDGKMLVSAG--GYLKWWNVDSGKSIQTF 959
Score = 165 (63.1 bits), Expect = 6.2e-20, Sum P(3) = 6.2e-20
Identities = 53/203 (26%), Positives = 97/203 (47%)
Query: 28 SSDGSFIA-CACGESINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRV 86
S DG IA C +++ + I+ D + A S DD+ + + +++++
Sbjct: 360 SEDGQRIASCGADKTLQVFKAETGEKLLEIKAHEDEVLCCAFSADDRFIATCSVDKKVKI 419
Query: 87 WDLSTLKCLRSWKGHDGPAIGMACHPSGG----LLATAGADRKVLVWDVDGGFCTHYFKG 142
W+ T + ++S+ H CH + LLAT +D + +WD++ C + G
Sbjct: 420 WNSVTGELVQSYDEHSEQV--NCCHFTNNSNHLLLATGSSDYFLKLWDLNQKECRNTMFG 477
Query: 143 HKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLA---KKCVAT----LDKHFSR----- 190
H VS F PD DK LL S S D T+++WD+ + +K + L+ S+
Sbjct: 478 HTNSVSHCRFSPD-DK-LLASCSADGTLKLWDVKSANERKSINVKQFFLNSEESQEDMEV 535
Query: 191 -VTSMAITSDGSTLISAGRDKVV 212
V + ++DG++L+ A ++KV+
Sbjct: 536 MVKCCSWSADGASLVVAAKNKVL 558
Score = 160 (61.4 bits), Expect = 9.1e-08, P = 9.1e-08
Identities = 45/172 (26%), Positives = 79/172 (45%)
Query: 440 HMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINS 499
H AV FS+ Q + S +D T++V+ ++ E+ + +KA H ++
Sbjct: 350 HTDAVYHACFSEDGQR-IASCGADKTLQVFK----AETGEKLLEIKA------HEDEVLC 398
Query: 500 LAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASG--D 557
A + +D + T S D+ +W V ++ H + F+ ++ A+G D
Sbjct: 399 CAFSADDRFIATCSVDKKVKIWNSVTGELVQSYDEHSEQVNCCHFTNNSNHLLLATGSSD 458
Query: 558 KTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRT 609
+K+W ++ C T GHT+SV F + SC ADG +KLW V++
Sbjct: 459 YFLKLWDLNQKECRNTMFGHTNSVSHCRFSPDDKLLASCSADGTLKLWDVKS 510
Score = 156 (60.0 bits), Expect = 2.4e-07, P = 2.4e-07
Identities = 34/123 (27%), Positives = 57/123 (46%)
Query: 527 VSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASF 586
+S + R H ++ FS Q + + DKT++++ G L + H VL +F
Sbjct: 342 LSRLVVRPHTDAVYHACFSEDGQRIASCGADKTLQVFKAETGEKLLEIKAHEDEVLCCAF 401
Query: 587 LTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTE--MFATGGSDALV 644
I +C D VK+W TGE + +YD+H +++ + + ATG SD +
Sbjct: 402 SADDRFIATCSVDKKVKIWNSVTGELVQSYDEHSEQVNCCHFTNNSNHLLLATGSSDYFL 461
Query: 645 NLW 647
LW
Sbjct: 462 KLW 464
Score = 151 (58.2 bits), Expect = 8.5e-07, P = 8.5e-07
Identities = 45/191 (23%), Positives = 83/191 (43%)
Query: 28 SSDGSFIACACGESINIVDLSNASIKSTI--EGGSDTITALALSPDDKLLFSSGHSREIR 85
++DG + + +S + + N + T+ + +T+ L + +LL S ++
Sbjct: 757 TTDGKNVISSSDDSA--IQVWNWQSEETVSLQAHQETVKDFRLLKNSRLL-SWSFDGTVK 813
Query: 86 VWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKG 145
VW++ T + + + H + P ++ AD+ +W D H +GHKG
Sbjct: 814 VWNIITGRIEKDFVCHQDTVLSCDISPDATKFSSTSADKTAKIWSFDLLSPLHELRGHKG 873
Query: 146 VVSSILFHPDTDKSLLFSGSDDATVRVWDL----LAKKCVATLDK-----HFSRVTSMAI 196
V F D +LL +G D+ +R+W++ L C L + H VT +
Sbjct: 874 CVRCSAF--SVDSTLLATGDDNGEIRIWNVSNGELLHSCAPVLVEGGAATHGGWVTDLRF 931
Query: 197 TSDGSTLISAG 207
+ DG L+SAG
Sbjct: 932 SPDGKMLVSAG 942
Score = 146 (56.5 bits), Expect = 2.8e-19, Sum P(3) = 2.8e-19
Identities = 49/177 (27%), Positives = 81/177 (45%)
Query: 438 TGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDI 497
T H V + F+ +N ++S S D I+VW++ +E+ ++L+A H + +
Sbjct: 745 TRHKNTVRHIQFTTDGKN-VISSSDDSAIQVWNWQ-----SEETVSLQA------HQETV 792
Query: 498 NSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGD 557
+ N L+ + S D T VW + F H+ + S + SP + S D
Sbjct: 793 KDFRLLKNSRLL-SWSFDGTVKVWNIITGRIEKDFVCHQDTVLSCDISPDATKFSSTSAD 851
Query: 558 KTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGAD-GLVKLWTVRTGECI 613
KT KIWS S L GH V R S + + +++ G D G +++W V GE +
Sbjct: 852 KTAKIWSFDLLSPLHELRGHKGCV-RCSAFSVDSTLLATGDDNGEIRIWNVSNGELL 907
Score = 131 (51.2 bits), Expect = 5.6e-07, Sum P(2) = 5.6e-07
Identities = 56/237 (23%), Positives = 103/237 (43%)
Query: 324 ADQQLLLYTTVEVPEKKMELILSKRLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDL 383
AD+ L ++ E EK +E+ + +E+L F +++++A + ++V++++
Sbjct: 371 ADKTLQVFKA-ETGEKLLEI------KAHEDEVLCCAF-SADDRFIATCSVDKKVKIWNS 422
Query: 384 SSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGA 443
+ HSE V C +S +L+ TGS D ++LWD + C GH +
Sbjct: 423 VTGELVQSYDEHSEQVNCCHFTN-NSNHLLLATGSSDYFLKLWDLNQKECRNTMFGHTNS 481
Query: 444 VGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAV- 502
V FS L S S+D T+K+W D S + + +N+K + + ++ + V
Sbjct: 482 VSHCRFSPD-DKLLASCSADGTLKLW--DVKSANERKSINVKQFFLNSEESQEDMEVMVK 538
Query: 503 -----APNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITA 554
A SLV L++ + GH I +FSP + + + A
Sbjct: 539 CCSWSADGASLVVAAKNKVLLFNIHTGGLLAEI-HTGHHSTIQYCDFSPSNHLAVVA 594
Score = 125 (49.1 bits), Expect = 2.4e-06, Sum P(2) = 2.4e-06
Identities = 45/195 (23%), Positives = 88/195 (45%)
Query: 375 IEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCV 434
+E + ++ ++S V+ H++ V C G+ + G+ D +++++ +E+ +
Sbjct: 331 LEWINKKNIKNLS-RLVVRPHTDAVY--HACFSEDGQRIASCGA-DKTLQVFKAETGEKL 386
Query: 435 GVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHG 494
H V AFS F+ + S D +K+W+ ++ + Q + ++ V H
Sbjct: 387 LEIKAHEDEVLCCAFSAD-DRFIATCSVDKKVKIWN--SVTGELVQSYDEHSEQVNCCHF 443
Query: 495 KDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITA 554
+ NS N L+ TGS D +W L T GH + FSP D+++ +
Sbjct: 444 TN-NS-----NHLLLATGSSDYFLKLWDLNQKECRNTMFGHTNSVSHCRFSPDDKLLASC 497
Query: 555 SGDKTIKIWSISDGS 569
S D T+K+W + +
Sbjct: 498 SADGTLKLWDVKSAN 512
Score = 123 (48.4 bits), Expect = 0.00089, P = 0.00089
Identities = 47/182 (25%), Positives = 81/182 (44%)
Query: 39 GESINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSW 98
G S+ +++L N + + +T+ + + D K + SS I+VW+ + + + S
Sbjct: 727 GHSLKVLELLNNRLFQSRTRHKNTVRHIQFTTDGKNVISSSDDSAIQVWNWQSEETV-SL 785
Query: 99 KGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDK 158
+ H + LL+ + D V VW++ G F H+ V S PD K
Sbjct: 786 QAHQETVKDFRLLKNSRLLSWS-FDGTVKVWNIITGRIEKDFVCHQDTVLSCDISPDATK 844
Query: 159 SLLFSGSDDATVRVW--DLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDK-VVNLW 215
S S D T ++W DLL+ + L H V A + D STL++ G D + +W
Sbjct: 845 --FSSTSADKTAKIWSFDLLSP--LHELRGHKGCVRCSAFSVD-STLLATGDDNGEIRIW 899
Query: 216 DL 217
++
Sbjct: 900 NV 901
Score = 122 (48.0 bits), Expect = 1.6e-15, Sum P(3) = 1.6e-15
Identities = 41/157 (26%), Positives = 72/157 (45%)
Query: 105 AIGMACHPSGGL-LATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFS 163
A+ AC G +A+ GAD+ + V+ + G K H+ V F D D+ + +
Sbjct: 353 AVYHACFSEDGQRIASCGADKTLQVFKAETGEKLLEIKAHEDEVLCCAFSAD-DR-FIAT 410
Query: 164 GSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISA--GRDKVVNLWDLRDYS 221
S D V++W+ + + V + D+H +V T++ + L+ A D + LWDL
Sbjct: 411 CSVDKKVKIWNSVTGELVQSYDEHSEQVNCCHFTNNSNHLLLATGSSDYFLKLWDLNQKE 470
Query: 222 CKLTVPTYEMVEAVCAIPPGSAFDSFLSSYNQQ-TIK 257
C+ T+ + + C P D L+S + T+K
Sbjct: 471 CRNTMFGHTNSVSHCRFSPD---DKLLASCSADGTLK 504
Score = 108 (43.1 bits), Expect = 2.2e-15, Sum P(3) = 2.2e-15
Identities = 32/158 (20%), Positives = 60/158 (37%)
Query: 493 HGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVI 552
H + + + V + S D VW V+ + H+ + ++ +
Sbjct: 747 HKNTVRHIQFTTDGKNVISSSDDSAIQVWNWQS-EETVSLQAHQETVKDFRLLKNSRL-L 804
Query: 553 TASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGEC 612
+ S D T+K+W+I G K F H +VL + S AD K+W+
Sbjct: 805 SWSFDGTVKVWNIITGRIEKDFVCHQDTVLSCDISPDATKFSSTSADKTAKIWSFDLLSP 864
Query: 613 IATYDKHEDKIWALAVGKKTEMFATGGSDALVNLWHDS 650
+ H+ + A + + ATG + + +W+ S
Sbjct: 865 LHELRGHKGCVRCSAFSVDSTLLATGDDNGEIRIWNVS 902
Score = 108 (43.1 bits), Expect = 2.2e-15, Sum P(3) = 2.2e-15
Identities = 47/176 (26%), Positives = 79/176 (44%)
Query: 469 WSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVS 528
WSFDG + + + + H + S ++P+ + + S D+TA +W DL+S
Sbjct: 806 WSFDG-TVKVWNIITGRIEKDFVCHQDTVLSCDISPDATKFSSTSADKTAKIWSF-DLLS 863
Query: 529 VV-TFRGHKRGIWSVEFSPVDQVVITASGDKT--IKIWSISDGSCLKTFEGHTSSVLRAS 585
+ RGHK + FS VD ++ A+GD I+IW++S+G L H+ A
Sbjct: 864 PLHELRGHKGCVRCSAFS-VDSTLL-ATGDDNGEIRIWNVSNGELL-----HSC----AP 912
Query: 586 FLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSD 641
L G G + L G+ + + + K W + GK + F T G++
Sbjct: 913 VLVEGGAATHGG--WVTDLRFSPDGKMLVSAGGYL-KWWNVDSGKSIQTFYTNGTN 965
Score = 94 (38.1 bits), Expect = 1.1e-12, Sum P(3) = 1.1e-12
Identities = 33/144 (22%), Positives = 63/144 (43%)
Query: 28 SSDGSFIACACGES---INIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREI 84
+++ + + A G S + + DL+ ++T+ G +++++ SPDDKLL S +
Sbjct: 444 TNNSNHLLLATGSSDYFLKLWDLNQKECRNTMFGHTNSVSHCRFSPDDKLLASCSADGTL 503
Query: 85 RVWDLSTLK----------CLRSWKGHDGPAIGMAC---HPSGGLLATAGADRKVLVWDV 131
++WD+ + L S + + + + C G L A A KVL++++
Sbjct: 504 KLWDVKSANERKSINVKQFFLNSEESQEDMEVMVKCCSWSADGASLVVA-AKNKVLLFNI 562
Query: 132 D-GGFCTHYFKGHKGVVSSILFHP 154
GG GH + F P
Sbjct: 563 HTGGLLAEIHTGHHSTIQYCDFSP 586
Score = 85 (35.0 bits), Expect = 4.4e-13, Sum P(3) = 4.4e-13
Identities = 27/117 (23%), Positives = 53/117 (45%)
Query: 319 LLCV-TADQQLLLYTTVEVPEKKMELILSKRLVGYNE--EILDLKFLGEEEQYLAVATNI 375
L C +AD + + +V+ K + + + Y+E E ++ +L +AT
Sbjct: 397 LCCAFSADDRFIATCSVDKKVKIWNSVTGELVQSYDEHSEQVNCCHFTNNSNHLLLATGS 456
Query: 376 EQ--VQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSES 430
++++DL+ C + GH+ V C S L+ + S D +++LWD +S
Sbjct: 457 SDYFLKLWDLNQKECRNTMFGHTNSV---SHCRFSPDDKLLASCSADGTLKLWDVKS 510
Score = 72 (30.4 bits), Expect = 9.9e-12, Sum P(3) = 9.9e-12
Identities = 15/90 (16%), Positives = 42/90 (46%)
Query: 559 TIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDK 618
++K+ + + ++ H ++V F T G ++S D +++W ++ E ++
Sbjct: 729 SLKVLELLNNRLFQSRTRHKNTVRHIQFTTDGKNVISSSDDSAIQVWNWQSEETVSL-QA 787
Query: 619 HEDKIWALAVGKKTEMFATGGSDALVNLWH 648
H++ + + K + + + D V +W+
Sbjct: 788 HQETVKDFRLLKNSRLLSWS-FDGTVKVWN 816
Score = 68 (29.0 bits), Expect = 8.4e-12, Sum P(2) = 8.4e-12
Identities = 50/230 (21%), Positives = 90/230 (39%)
Query: 253 QQTIKKKRRSLEIHFITVGERGIVRMWNADSACLYEQKSSDVTISFEM-DDSKRGFTAAT 311
Q + K I F T G+ I + DSA S+ T+S + ++ + F
Sbjct: 742 QSRTRHKNTVRHIQFTTDGKNVISS--SDDSAIQVWNWQSEETVSLQAHQETVKDFR--- 796
Query: 312 VLPSNQGLLCVTADQQLLLYTTVEVPEKKMELILSKRLVGYNEEILDLKFLGEEEQYLAV 371
L N LL + D + ++ + ++E K V + + +L + ++ +
Sbjct: 797 -LLKNSRLLSWSFDGTVKVWNIIT---GRIE----KDFVCHQDTVLSCDISPDATKFSST 848
Query: 372 ATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSES- 430
+ + + +++ +S + L GH V C A S L+ TG + +R+W+ +
Sbjct: 849 SAD-KTAKIWSFDLLSPLHELRGHKGCVRC---SAFSVDSTLLATGDDNGEIRIWNVSNG 904
Query: 431 ---RCCVGV----GTG-HMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFD 472
C V G H G V + FS LVS +K W+ D
Sbjct: 905 ELLHSCAPVLVEGGAATHGGWVTDLRFSPD-GKMLVSAGG--YLKWWNVD 951
Score = 53 (23.7 bits), Expect = 4.4e-13, Sum P(3) = 4.4e-13
Identities = 16/64 (25%), Positives = 26/64 (40%)
Query: 187 HFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYEMVEAVCAIPPGSAFDS 246
H V + DG + S G DK + ++ L + +E CA SA D
Sbjct: 350 HTDAVYHACFSEDGQRIASCGADKTLQVFKAETGEKLLEIKAHEDEVLCCAF---SADDR 406
Query: 247 FLSS 250
F+++
Sbjct: 407 FIAT 410
Score = 40 (19.1 bits), Expect = 1.5e-21, Sum P(3) = 1.5e-21
Identities = 8/36 (22%), Positives = 15/36 (41%)
Query: 388 CSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSV 423
C + + H +V C GK + + GS + +
Sbjct: 582 CDFSPSNHLAVVALSQYCVEKRGKFIWLPGSLERKL 617
Score = 38 (18.4 bits), Expect = 3.4e-15, Sum P(3) = 3.4e-15
Identities = 8/29 (27%), Positives = 15/29 (51%)
Query: 252 NQQTIKKKRRSLEIHFITVGERGIVRMWN 280
+Q+T+K R ++ G V++WN
Sbjct: 788 HQETVKDFRLLKNSRLLSWSFDGTVKVWN 816
>UNIPROTKB|Q32LN7 [details] [associations]
symbol:WDR61 "WD repeat-containing protein 61" species:9913
"Bos taurus" [GO:0080182 "histone H3-K4 trimethylation"
evidence=ISS] [GO:0055087 "Ski complex" evidence=ISS] [GO:0035327
"transcriptionally active chromatin" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:2001162 "positive regulation of histone H3-K79 methylation"
evidence=ISS] [GO:0051571 "positive regulation of histone H3-K4
methylation" evidence=ISS] [GO:0045638 "negative regulation of
myeloid cell differentiation" evidence=ISS] [GO:0016593 "Cdc73/Paf1
complex" evidence=ISS] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0032968 "positive regulation of transcription elongation from
RNA polymerase II promoter" evidence=ISS] [GO:0016055 "Wnt receptor
signaling pathway" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0016055 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0006351
GO:GO:0035327 GO:GO:0051571 GO:GO:0032968 GO:GO:0080182
GO:GO:0016593 GO:GO:0045638 GO:GO:2001162
GeneTree:ENSGT00700000104507 GO:GO:0055087 EMBL:BC109495
IPI:IPI00695868 RefSeq:NP_001033186.1 UniGene:Bt.20040
ProteinModelPortal:Q32LN7 PRIDE:Q32LN7 Ensembl:ENSBTAT00000021203
GeneID:513208 KEGG:bta:513208 CTD:80349 HOGENOM:HOG000036765
HOVERGEN:HBG059813 InParanoid:Q32LN7 KO:K12602 OMA:IATGSHH
OrthoDB:EOG4VMFFW NextBio:20870747 Uniprot:Q32LN7
Length = 305
Score = 246 (91.7 bits), Expect = 1.8e-21, Sum P(2) = 1.8e-21
Identities = 73/263 (27%), Positives = 123/263 (46%)
Query: 386 MSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSES-RCCVGVGTGHMGAV 444
+ + L GH V+ +D +S + + S D +RLWD E+ + + G + A
Sbjct: 54 LDLQWSLEGHQLGVVSVD---ISHTLPIAASSSLDAHIRLWDLENGKQIKSIDAGPVDA- 109
Query: 445 GAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAP 504
+AFS Q +L +G+ H KV F S E ++ + GK I S+A +P
Sbjct: 110 WTLAFSPDSQ-YLATGT--HVGKVNIFGVESGKKEYSLDTR--------GKFILSIAYSP 158
Query: 505 NDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWS 564
+ + +G+ D ++ + + T GH I S+ FSP Q+++TAS D IKI+
Sbjct: 159 DGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYD 218
Query: 565 ISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIW 624
+ + T GH S VL +F VS +D VK+W V T C+ T+ H+D++W
Sbjct: 219 VQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCVHTFFDHQDQVW 278
Query: 625 ALAVGKKTEMFATGGSDALVNLW 647
+ + G D ++++
Sbjct: 279 GVKYNGNGSKIVSVGDDQEIHIY 301
Score = 223 (83.6 bits), Expect = 4.0e-17, P = 4.0e-17
Identities = 55/193 (28%), Positives = 93/193 (48%)
Query: 25 LVVSSDGSFIACACGES-INIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSRE 83
L S D ++A +NI + + + +++ I ++A SPD K L S
Sbjct: 112 LAFSPDSQYLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGI 171
Query: 84 IRVWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGH 143
I ++D++T K L + +GH P + P LL TA D + ++DV GH
Sbjct: 172 INIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGH 231
Query: 144 KGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTL 203
V ++ F PD D + S S D +V+VWD+ + CV T H +V + +GS +
Sbjct: 232 ASWVLNVAFCPD-DTHFV-SSSSDKSVKVWDVGTRTCVHTFFDHQDQVWGVKYNGNGSKI 289
Query: 204 ISAGRDKVVNLWD 216
+S G D+ ++++D
Sbjct: 290 VSVGDDQEIHIYD 302
Score = 207 (77.9 bits), Expect = 2.5e-14, P = 2.5e-14
Identities = 54/182 (29%), Positives = 88/182 (48%)
Query: 42 INIVDLSNAS-IKSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKG 100
I + DL N IKS G D T LA SPD + L + H ++ ++ + + K S
Sbjct: 88 IRLWDLENGKQIKSIDAGPVDAWT-LAFSPDSQYLATGTHVGKVNIFGVESGKKEYSLDT 146
Query: 101 HDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSL 160
+ +A P G LA+ D + ++D+ G H +GH + S+ F PD+ L
Sbjct: 147 RGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQ--L 204
Query: 161 LFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDY 220
L + SDD ++++D+ TL H S V ++A D + +S+ DK V +WD+
Sbjct: 205 LVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTR 264
Query: 221 SC 222
+C
Sbjct: 265 TC 266
Score = 161 (61.7 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 58/240 (24%), Positives = 98/240 (40%)
Query: 414 IVTGSKDNSVRLWD--SESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSF 471
+VTGS D+ V++W E GH V +V S L S S D I++W
Sbjct: 35 VVTGSLDDLVKVWKWRDEKLDLQWSLEGHQLGVVSVDISHTLP-IAASSSLDAHIRLW-- 91
Query: 472 DGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVT 531
D E +K+ + A D +LA +P+ + TG+ ++ + +
Sbjct: 92 -----DLENGKQIKS---IDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESGKKEYS 143
Query: 532 FRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGA 591
+ I S+ +SP + + + + D I I+ I+ G L T EGH + +F
Sbjct: 144 LDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQ 203
Query: 592 QIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLWHDST 651
+V+ DG +K++ V+ T H + +A F + SD V +W T
Sbjct: 204 LLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGT 263
Score = 157 (60.3 bits), Expect = 3.7e-08, Sum P(2) = 3.7e-08
Identities = 49/200 (24%), Positives = 93/200 (46%)
Query: 365 EEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALS-SGKILIVTGSKDNSV 423
+ QYLA T++ +V ++ + S Y L + +L + A S GK L +G+ D +
Sbjct: 117 DSQYLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSI---AYSPDGKYL-ASGAIDGII 172
Query: 424 RLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMN 483
++D + + GH + ++ FS Q LV+ S D IK++ Q N
Sbjct: 173 NIFDIATGKLLHTLEGHAMPIRSLTFSPDSQ-LLVTASDDGYIKIYDV--------QHAN 223
Query: 484 LKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVE 543
L ++ H + ++A P+D+ + S D++ VW + V TF H+ +W V+
Sbjct: 224 LAG--TLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCVHTFFDHQDQVWGVK 281
Query: 544 FSPVDQVVITASGDKTIKIW 563
++ +++ D+ I I+
Sbjct: 282 YNGNGSKIVSVGDDQEIHIY 301
Score = 148 (57.2 bits), Expect = 2.3e-07, P = 2.3e-07
Identities = 48/203 (23%), Positives = 90/203 (44%)
Query: 55 TIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPSG 114
++EG + ++ +S + SS IR+WDL K ++S A +A P
Sbjct: 59 SLEGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLENGKQIKSIDAGPVDAWTLAFSPDS 118
Query: 115 GLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWD 174
LAT KV ++ V+ G + + SI + PD L SG+ D + ++D
Sbjct: 119 QYLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDG--KYLASGAIDGIINIFD 176
Query: 175 LLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYEMVEA 234
+ K + TL+ H + S+ + D L++A D + ++D++ + T+ +
Sbjct: 177 IATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVL 236
Query: 235 VCAIPPGSAFDSFLSSYNQQTIK 257
A P F+SS + +++K
Sbjct: 237 NVAFCPDDTH--FVSSSSDKSVK 257
Score = 147 (56.8 bits), Expect = 3.0e-07, P = 3.0e-07
Identities = 47/212 (22%), Positives = 94/212 (44%)
Query: 440 HMGAVGAVAF-SKKLQNF--LVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKD 496
H A+ +VA+ S K +N +V+GS D +KVW + D + + VV+ D
Sbjct: 15 HDDAIWSVAWGSNKKENSETVVTGSLDDLVKVWKWRDEKLDLQWSLEGHQLGVVSV---D 71
Query: 497 IN-SLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITAS 555
I+ +L +A + SL D +W L + + + W++ FSP Q + T +
Sbjct: 72 ISHTLPIAASSSL------DAHIRLWDLENGKQIKSIDAGPVDAWTLAFSPDSQYLATGT 125
Query: 556 GDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIAT 615
+ I+ + G + + +L ++ G + S DG++ ++ + TG+ + T
Sbjct: 126 HVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHT 185
Query: 616 YDKHEDKIWALAVGKKTEMFATGGSDALVNLW 647
+ H I +L +++ T D + ++
Sbjct: 186 LEGHAMPIRSLTFSPDSQLLVTASDDGYIKIY 217
Score = 111 (44.1 bits), Expect = 5.9e-09, Sum P(2) = 5.9e-09
Identities = 33/121 (27%), Positives = 56/121 (46%)
Query: 349 LVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALS 408
L G+ I L F + Q L A++ +++YD+ + + L+GH+ VL + C
Sbjct: 186 LEGHAMPIRSLTF-SPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDD 244
Query: 409 SGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKV 468
+ V+ S D SV++WD +R CV H V V ++ +VS D I +
Sbjct: 245 TH---FVSSSSDKSVKVWDVGTRTCVHTFFDHQDQVWGVKYNGNGSK-IVSVGDDQEIHI 300
Query: 469 W 469
+
Sbjct: 301 Y 301
Score = 98 (39.6 bits), Expect = 5.9e-09, Sum P(2) = 5.9e-09
Identities = 29/136 (21%), Positives = 60/136 (44%)
Query: 84 IRVWDLSTLKCLRSW--KGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFK 141
++VW K W +GH + + + + A++ D + +WD++ G
Sbjct: 44 VKVWKWRDEKLDLQWSLEGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLENGKQIKSID 103
Query: 142 GHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGS 201
++ F PD+ L +G+ V ++ + + K +LD + S+A + DG
Sbjct: 104 AGPVDAWTLAFSPDSQ--YLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGK 161
Query: 202 TLISAGRDKVVNLWDL 217
L S D ++N++D+
Sbjct: 162 YLASGAIDGIINIFDI 177
Score = 39 (18.8 bits), Expect = 1.8e-21, Sum P(2) = 1.8e-21
Identities = 6/21 (28%), Positives = 12/21 (57%)
Query: 199 DGSTLISAGRDKVVNLWDLRD 219
+ T+++ D +V +W RD
Sbjct: 31 NSETVVTGSLDDLVKVWKWRD 51
>UNIPROTKB|Q9GZS3 [details] [associations]
symbol:WDR61 "WD repeat-containing protein 61" species:9606
"Homo sapiens" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0016055 "Wnt receptor signaling pathway"
evidence=IEA] [GO:0016593 "Cdc73/Paf1 complex" evidence=IDA]
[GO:0032968 "positive regulation of transcription elongation from
RNA polymerase II promoter" evidence=IDA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IDA] [GO:0045638 "negative regulation of myeloid cell
differentiation" evidence=IDA] [GO:0055087 "Ski complex"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005634
"nucleus" evidence=IDA] [GO:0035327 "transcriptionally active
chromatin" evidence=IDA] [GO:0051571 "positive regulation of
histone H3-K4 methylation" evidence=IMP] [GO:2001162 "positive
regulation of histone H3-K79 methylation" evidence=IMP] [GO:0080182
"histone H3-K4 trimethylation" evidence=IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0016055 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0045944 GO:GO:0006351 EMBL:CH471136 GO:GO:0035327
GO:GO:0051571 GO:GO:0032968 GO:GO:0080182 GO:GO:0016593
GO:GO:0045638 GO:GO:2001162 GO:GO:0055087 CTD:80349
HOGENOM:HOG000036765 HOVERGEN:HBG059813 KO:K12602 OMA:IATGSHH
OrthoDB:EOG4VMFFW EMBL:AF309553 EMBL:AF100786 EMBL:AF127799
EMBL:AK024754 EMBL:CR457333 EMBL:BC010080 IPI:IPI00019269
RefSeq:NP_079510.1 UniGene:Hs.513055 PDB:3OW8 PDBsum:3OW8
ProteinModelPortal:Q9GZS3 SMR:Q9GZS3 DIP:DIP-36672N IntAct:Q9GZS3
MINT:MINT-1376321 STRING:Q9GZS3 PhosphoSite:Q9GZS3 DMDM:74761365
PaxDb:Q9GZS3 PeptideAtlas:Q9GZS3 PRIDE:Q9GZS3 DNASU:80349
Ensembl:ENST00000267973 Ensembl:ENST00000558311 GeneID:80349
KEGG:hsa:80349 UCSC:uc002bdn.3 GeneCards:GC15M078575
HGNC:HGNC:30300 HPA:HPA039932 HPA:HPA040065 MIM:609540
neXtProt:NX_Q9GZS3 PharmGKB:PA142670595 InParanoid:Q9GZS3
PhylomeDB:Q9GZS3 ChiTaRS:WDR61 EvolutionaryTrace:Q9GZS3
GenomeRNAi:80349 NextBio:70956 Bgee:Q9GZS3 CleanEx:HS_WDR61
Genevestigator:Q9GZS3 GermOnline:ENSG00000140395 Uniprot:Q9GZS3
Length = 305
Score = 246 (91.7 bits), Expect = 1.8e-21, Sum P(2) = 1.8e-21
Identities = 73/263 (27%), Positives = 123/263 (46%)
Query: 386 MSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSES-RCCVGVGTGHMGAV 444
+ + L GH V+ +D +S + + S D +RLWD E+ + + G + A
Sbjct: 54 LDLQWSLEGHQLGVVSVD---ISHTLPIAASSSLDAHIRLWDLENGKQIKSIDAGPVDA- 109
Query: 445 GAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAP 504
+AFS Q +L +G+ H KV F S E ++ + GK I S+A +P
Sbjct: 110 WTLAFSPDSQ-YLATGT--HVGKVNIFGVESGKKEYSLDTR--------GKFILSIAYSP 158
Query: 505 NDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWS 564
+ + +G+ D ++ + + T GH I S+ FSP Q+++TAS D IKI+
Sbjct: 159 DGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYD 218
Query: 565 ISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIW 624
+ + T GH S VL +F VS +D VK+W V T C+ T+ H+D++W
Sbjct: 219 VQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCVHTFFDHQDQVW 278
Query: 625 ALAVGKKTEMFATGGSDALVNLW 647
+ + G D ++++
Sbjct: 279 GVKYNGNGSKIVSVGDDQEIHIY 301
Score = 223 (83.6 bits), Expect = 4.0e-17, P = 4.0e-17
Identities = 55/193 (28%), Positives = 93/193 (48%)
Query: 25 LVVSSDGSFIACACGES-INIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSRE 83
L S D ++A +NI + + + +++ I ++A SPD K L S
Sbjct: 112 LAFSPDSQYLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGI 171
Query: 84 IRVWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGH 143
I ++D++T K L + +GH P + P LL TA D + ++DV GH
Sbjct: 172 INIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGH 231
Query: 144 KGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTL 203
V ++ F PD D + S S D +V+VWD+ + CV T H +V + +GS +
Sbjct: 232 ASWVLNVAFCPD-DTHFV-SSSSDKSVKVWDVGTRTCVHTFFDHQDQVWGVKYNGNGSKI 289
Query: 204 ISAGRDKVVNLWD 216
+S G D+ ++++D
Sbjct: 290 VSVGDDQEIHIYD 302
Score = 207 (77.9 bits), Expect = 2.5e-14, P = 2.5e-14
Identities = 54/182 (29%), Positives = 88/182 (48%)
Query: 42 INIVDLSNAS-IKSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKG 100
I + DL N IKS G D T LA SPD + L + H ++ ++ + + K S
Sbjct: 88 IRLWDLENGKQIKSIDAGPVDAWT-LAFSPDSQYLATGTHVGKVNIFGVESGKKEYSLDT 146
Query: 101 HDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSL 160
+ +A P G LA+ D + ++D+ G H +GH + S+ F PD+ L
Sbjct: 147 RGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQ--L 204
Query: 161 LFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDY 220
L + SDD ++++D+ TL H S V ++A D + +S+ DK V +WD+
Sbjct: 205 LVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTR 264
Query: 221 SC 222
+C
Sbjct: 265 TC 266
Score = 163 (62.4 bits), Expect = 7.3e-09, Sum P(2) = 7.3e-09
Identities = 58/240 (24%), Positives = 100/240 (41%)
Query: 414 IVTGSKDNSVRLWD-SESRCCVGVGT-GHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSF 471
+VTGS D+ V++W + R + GH V +V S L S S D I++W
Sbjct: 35 VVTGSLDDLVKVWKWRDERLDLQWSLEGHQLGVVSVDISHTLP-IAASSSLDAHIRLW-- 91
Query: 472 DGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVT 531
D E +K+ + A D +LA +P+ + TG+ ++ + +
Sbjct: 92 -----DLENGKQIKS---IDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESGKKEYS 143
Query: 532 FRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGA 591
+ I S+ +SP + + + + D I I+ I+ G L T EGH + +F
Sbjct: 144 LDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQ 203
Query: 592 QIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLWHDST 651
+V+ DG +K++ V+ T H + +A F + SD V +W T
Sbjct: 204 LLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGT 263
Score = 157 (60.3 bits), Expect = 3.7e-08, Sum P(2) = 3.7e-08
Identities = 49/200 (24%), Positives = 93/200 (46%)
Query: 365 EEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALS-SGKILIVTGSKDNSV 423
+ QYLA T++ +V ++ + S Y L + +L + A S GK L +G+ D +
Sbjct: 117 DSQYLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSI---AYSPDGKYL-ASGAIDGII 172
Query: 424 RLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMN 483
++D + + GH + ++ FS Q LV+ S D IK++ Q N
Sbjct: 173 NIFDIATGKLLHTLEGHAMPIRSLTFSPDSQ-LLVTASDDGYIKIYDV--------QHAN 223
Query: 484 LKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVE 543
L ++ H + ++A P+D+ + S D++ VW + V TF H+ +W V+
Sbjct: 224 LAG--TLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCVHTFFDHQDQVWGVK 281
Query: 544 FSPVDQVVITASGDKTIKIW 563
++ +++ D+ I I+
Sbjct: 282 YNGNGSKIVSVGDDQEIHIY 301
Score = 148 (57.2 bits), Expect = 2.3e-07, P = 2.3e-07
Identities = 48/203 (23%), Positives = 90/203 (44%)
Query: 55 TIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPSG 114
++EG + ++ +S + SS IR+WDL K ++S A +A P
Sbjct: 59 SLEGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLENGKQIKSIDAGPVDAWTLAFSPDS 118
Query: 115 GLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWD 174
LAT KV ++ V+ G + + SI + PD L SG+ D + ++D
Sbjct: 119 QYLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDG--KYLASGAIDGIINIFD 176
Query: 175 LLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYEMVEA 234
+ K + TL+ H + S+ + D L++A D + ++D++ + T+ +
Sbjct: 177 IATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVL 236
Query: 235 VCAIPPGSAFDSFLSSYNQQTIK 257
A P F+SS + +++K
Sbjct: 237 NVAFCPDDTH--FVSSSSDKSVK 257
Score = 143 (55.4 bits), Expect = 8.6e-07, P = 8.6e-07
Identities = 46/212 (21%), Positives = 94/212 (44%)
Query: 440 HMGAVGAVAF-SKKLQNF--LVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKD 496
H A+ +VA+ + K +N +V+GS D +KVW + D + + VV+ D
Sbjct: 15 HDDAIWSVAWGTNKKENSETVVTGSLDDLVKVWKWRDERLDLQWSLEGHQLGVVSV---D 71
Query: 497 IN-SLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITAS 555
I+ +L +A + SL D +W L + + + W++ FSP Q + T +
Sbjct: 72 ISHTLPIAASSSL------DAHIRLWDLENGKQIKSIDAGPVDAWTLAFSPDSQYLATGT 125
Query: 556 GDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIAT 615
+ I+ + G + + +L ++ G + S DG++ ++ + TG+ + T
Sbjct: 126 HVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHT 185
Query: 616 YDKHEDKIWALAVGKKTEMFATGGSDALVNLW 647
+ H I +L +++ T D + ++
Sbjct: 186 LEGHAMPIRSLTFSPDSQLLVTASDDGYIKIY 217
Score = 111 (44.1 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 33/121 (27%), Positives = 56/121 (46%)
Query: 349 LVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALS 408
L G+ I L F + Q L A++ +++YD+ + + L+GH+ VL + C
Sbjct: 186 LEGHAMPIRSLTF-SPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDD 244
Query: 409 SGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKV 468
+ V+ S D SV++WD +R CV H V V ++ +VS D I +
Sbjct: 245 TH---FVSSSSDKSVKVWDVGTRTCVHTFFDHQDQVWGVKYNGNGSK-IVSVGDDQEIHI 300
Query: 469 W 469
+
Sbjct: 301 Y 301
Score = 95 (38.5 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 28/136 (20%), Positives = 60/136 (44%)
Query: 84 IRVWDLSTLKCLRSW--KGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFK 141
++VW + W +GH + + + + A++ D + +WD++ G
Sbjct: 44 VKVWKWRDERLDLQWSLEGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLENGKQIKSID 103
Query: 142 GHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGS 201
++ F PD+ L +G+ V ++ + + K +LD + S+A + DG
Sbjct: 104 AGPVDAWTLAFSPDSQ--YLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGK 161
Query: 202 TLISAGRDKVVNLWDL 217
L S D ++N++D+
Sbjct: 162 YLASGAIDGIINIFDI 177
Score = 39 (18.8 bits), Expect = 1.8e-21, Sum P(2) = 1.8e-21
Identities = 6/21 (28%), Positives = 12/21 (57%)
Query: 199 DGSTLISAGRDKVVNLWDLRD 219
+ T+++ D +V +W RD
Sbjct: 31 NSETVVTGSLDDLVKVWKWRD 51
>UNIPROTKB|Q6GMD2 [details] [associations]
symbol:wdr61 "WD repeat-containing protein 61" species:8355
"Xenopus laevis" [GO:0005634 "nucleus" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0016593 "Cdc73/Paf1 complex"
evidence=ISS] [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=ISS]
[GO:0035327 "transcriptionally active chromatin" evidence=ISS]
[GO:0045638 "negative regulation of myeloid cell differentiation"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0051571
"positive regulation of histone H3-K4 methylation" evidence=ISS]
[GO:0055087 "Ski complex" evidence=ISS] [GO:0080182 "histone H3-K4
trimethylation" evidence=ISS] [GO:2001162 "positive regulation of
histone H3-K79 methylation" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327 GO:GO:0051571
GO:GO:0032968 GO:GO:0080182 GO:GO:0016593 GO:GO:0045638
GO:GO:2001162 GO:GO:0055087 CTD:80349 HOVERGEN:HBG059813 KO:K12602
EMBL:BC074136 RefSeq:NP_001086055.1 UniGene:Xl.23922
ProteinModelPortal:Q6GMD2 GeneID:444484 KEGG:xla:444484
Xenbase:XB-GENE-5751613 Uniprot:Q6GMD2
Length = 305
Score = 260 (96.6 bits), Expect = 2.1e-21, P = 2.1e-21
Identities = 82/283 (28%), Positives = 139/283 (49%)
Query: 369 LAVATNIEQ-VQVYDLSS--MSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRL 425
L ++ +++ V+V+ S + + L GH V+ +D SG I+ + S D +RL
Sbjct: 34 LVISGSLDDLVKVWKWSDERLEMQWALEGHQLGVVSVDVSP--SGNIM-ASSSLDAHIRL 90
Query: 426 WDSESRCCV-GVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNL 484
WD ES + + G + A +VAFS Q+ L +GS H KV F G+ + ++ +L
Sbjct: 91 WDLESGKQIRSIDAGPVDA-WSVAFSPDSQH-LATGS--HVGKVNIF-GV-ETGKKEYSL 144
Query: 485 KAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEF 544
+ GK I S+A +P+ + +G+ D ++ + + T GH I S+ F
Sbjct: 145 DTR------GKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTF 198
Query: 545 SPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKL 604
S Q+++TAS D IKI+ + S T GH S VL +F A VS +D VK+
Sbjct: 199 STDSQLLVTASDDGYIKIYDVQHASLAATLSGHGSWVLNVAFSPDDAHFVSSSSDKSVKV 258
Query: 605 WTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLW 647
W V C+ T+ H+D++W + + + G D ++++
Sbjct: 259 WDVSARTCVHTFLDHQDQVWGVKYNRNGSKIVSVGDDQEIHVY 301
Score = 213 (80.0 bits), Expect = 3.8e-15, P = 3.8e-15
Identities = 51/175 (29%), Positives = 86/175 (49%)
Query: 42 INIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGH 101
+NI + + +++ I ++A SPD K L S I ++D++T K L + +GH
Sbjct: 130 VNIFGVETGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGH 189
Query: 102 DGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLL 161
P + LL TA D + ++DV GH V ++ F PD D +
Sbjct: 190 AMPIRSLTFSTDSQLLVTASDDGYIKIYDVQHASLAATLSGHGSWVLNVAFSPD-DAHFV 248
Query: 162 FSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWD 216
S S D +V+VWD+ A+ CV T H +V + +GS ++S G D+ ++++D
Sbjct: 249 -SSSSDKSVKVWDVSARTCVHTFLDHQDQVWGVKYNRNGSKIVSVGDDQEIHVYD 302
Score = 213 (80.0 bits), Expect = 3.8e-15, P = 3.8e-15
Identities = 54/197 (27%), Positives = 97/197 (49%)
Query: 27 VSSDGSFIACACGES-INIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIR 85
VS G+ +A + ++ I + DL + +I+ G ++A SPD + L + H ++
Sbjct: 72 VSPSGNIMASSSLDAHIRLWDLESGKQIRSIDAGPVDAWSVAFSPDSQHLATGSHVGKVN 131
Query: 86 VWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKG 145
++ + T K S + +A P G LA+ D + ++D+ G H +GH
Sbjct: 132 IFGVETGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAM 191
Query: 146 VVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLIS 205
+ S+ F TD LL + SDD ++++D+ ATL H S V ++A + D + +S
Sbjct: 192 PIRSLTF--STDSQLLVTASDDGYIKIYDVQHASLAATLSGHGSWVLNVAFSPDDAHFVS 249
Query: 206 AGRDKVVNLWDLRDYSC 222
+ DK V +WD+ +C
Sbjct: 250 SSSDKSVKVWDVSARTC 266
Score = 183 (69.5 bits), Expect = 2.2e-11, P = 2.2e-11
Identities = 58/234 (24%), Positives = 109/234 (46%)
Query: 28 SSDGS--FIACACGESINIVDLSNASIKS--TIEGGSDTITALALSPDDKLLFSSGHSRE 83
S+DGS I+ + + + + S+ ++ +EG + ++ +SP ++ SS
Sbjct: 28 SNDGSELVISGSLDDLVKVWKWSDERLEMQWALEGHQLGVVSVDVSPSGNIMASSSLDAH 87
Query: 84 IRVWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGH 143
IR+WDL + K +RS A +A P LAT KV ++ V+ G +
Sbjct: 88 IRLWDLESGKQIRSIDAGPVDAWSVAFSPDSQHLATGSHVGKVNIFGVETGKKEYSLDTR 147
Query: 144 KGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTL 203
+ SI + PD L SG+ D + ++D+ K + TL+ H + S+ ++D L
Sbjct: 148 GKFILSIAYSPDG--KYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSTDSQLL 205
Query: 204 ISAGRDKVVNLWDLRDYSCKLTVPTYEMVEAVCAIPPGSAFDSFLSSYNQQTIK 257
++A D + ++D++ S T+ + A P A F+SS + +++K
Sbjct: 206 VTASDDGYIKIYDVQHASLAATLSGHGSWVLNVAFSPDDAH--FVSSSSDKSVK 257
Score = 182 (69.1 bits), Expect = 3.0e-11, P = 3.0e-11
Identities = 60/242 (24%), Positives = 106/242 (43%)
Query: 408 SSGKILIVTGSKDNSVRLWD-SESRCCVGVGT-GHMGAVGAVAFSKKLQNFLVSGSSDHT 465
+ G L+++GS D+ V++W S+ R + GH V +V S N + S S D
Sbjct: 29 NDGSELVISGSLDDLVKVWKWSDERLEMQWALEGHQLGVVSVDVSPS-GNIMASSSLDAH 87
Query: 466 IKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPD 525
I++W + +Q ++ A V D S+A +P+ + TGS ++ +
Sbjct: 88 IRLWDLES----GKQIRSIDAGPV------DAWSVAFSPDSQHLATGSHVGKVNIFGVET 137
Query: 526 LVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRAS 585
+ + I S+ +SP + + + + D I I+ I+ G L T EGH + +
Sbjct: 138 GKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLT 197
Query: 586 FLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVN 645
F T +V+ DG +K++ V+ AT H + +A F + SD V
Sbjct: 198 FSTDSQLLVTASDDGYIKIYDVQHASLAATLSGHGSWVLNVAFSPDDAHFVSSSSDKSVK 257
Query: 646 LW 647
+W
Sbjct: 258 VW 259
Score = 178 (67.7 bits), Expect = 8.6e-11, P = 8.6e-11
Identities = 40/151 (26%), Positives = 72/151 (47%)
Query: 25 LVVSSDGSFIACACGESI-NIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSRE 83
+ S DG ++A + I NI D++ + T+EG + I +L S D +LL ++
Sbjct: 154 IAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSTDSQLLVTASDDGY 213
Query: 84 IRVWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGH 143
I+++D+ + GH + +A P ++ +D+ V VWDV C H F H
Sbjct: 214 IKIYDVQHASLAATLSGHGSWVLNVAFSPDDAHFVSSSSDKSVKVWDVSARTCVHTFLDH 273
Query: 144 KGVVSSILFHPDTDKSLLFSGSDDATVRVWD 174
+ V + ++ + K + S DD + V+D
Sbjct: 274 QDQVWGVKYNRNGSK--IVSVGDDQEIHVYD 302
Score = 152 (58.6 bits), Expect = 8.2e-08, P = 8.2e-08
Identities = 45/200 (22%), Positives = 96/200 (48%)
Query: 365 EEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALS-SGKILIVTGSKDNSV 423
+ Q+LA +++ +V ++ + + Y L + +L + A S GK L +G+ D +
Sbjct: 117 DSQHLATGSHVGKVNIFGVETGKKEYSLDTRGKFILSI---AYSPDGKYL-ASGAIDGII 172
Query: 424 RLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMN 483
++D + + GH + ++ FS Q LV+ S D IK++ D + +
Sbjct: 173 NIFDIATGKLLHTLEGHAMPIRSLTFSTDSQ-LLVTASDDGYIKIY-------DVQ---H 221
Query: 484 LKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVE 543
A ++ HG + ++A +P+D+ + S D++ VW + V TF H+ +W V+
Sbjct: 222 ASLAATLSGHGSWVLNVAFSPDDAHFVSSSSDKSVKVWDVSARTCVHTFLDHQDQVWGVK 281
Query: 544 FSPVDQVVITASGDKTIKIW 563
++ +++ D+ I ++
Sbjct: 282 YNRNGSKIVSVGDDQEIHVY 301
Score = 137 (53.3 bits), Expect = 4.0e-06, P = 4.0e-06
Identities = 39/152 (25%), Positives = 74/152 (48%)
Query: 505 NDS--LVCTGSQDRTACVWRLPD--LVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTI 560
ND LV +GS D VW+ D L GH+ G+ SV+ SP ++ ++S D I
Sbjct: 29 NDGSELVISGSLDDLVKVWKWSDERLEMQWALEGHQLGVVSVDVSPSGNIMASSSLDAHI 88
Query: 561 KIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGAD-GLVKLWTVRTGECIATYDKH 619
++W + G +++ + +F + +Q ++ G+ G V ++ V TG+ + D
Sbjct: 89 RLWDLESGKQIRSIDAGPVDAWSVAF-SPDSQHLATGSHVGKVNIFGVETGKKEYSLDTR 147
Query: 620 EDKIWALAVGKKTEMFATGGSDALVNLWHDST 651
I ++A + A+G D ++N++ +T
Sbjct: 148 GKFILSIAYSPDGKYLASGAIDGIINIFDIAT 179
Score = 125 (49.1 bits), Expect = 5.4e-09, Sum P(2) = 5.4e-09
Identities = 36/121 (29%), Positives = 55/121 (45%)
Query: 349 LVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALS 408
L G+ I L F + Q L A++ +++YD+ S + L+GH VL A S
Sbjct: 186 LEGHAMPIRSLTF-STDSQLLVTASDDGYIKIYDVQHASLAATLSGHGSWVL---NVAFS 241
Query: 409 SGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKV 468
V+ S D SV++WD +R CV H V V +++ +VS D I V
Sbjct: 242 PDDAHFVSSSSDKSVKVWDVSARTCVHTFLDHQDQVWGVKYNRNGSK-IVSVGDDQEIHV 300
Query: 469 W 469
+
Sbjct: 301 Y 301
Score = 121 (47.7 bits), Expect = 0.00025, P = 0.00025
Identities = 32/119 (26%), Positives = 55/119 (46%)
Query: 535 HKRGIWSVEF----SPVDQVVITASGDKTIKIWSISDGSCLKTF--EGHTSSVLRASFLT 588
H+ IWSV + + ++VI+ S D +K+W SD + EGH V+
Sbjct: 15 HEDAIWSVGWGKNSNDGSELVISGSLDDLVKVWKWSDERLEMQWALEGHQLGVVSVDVSP 74
Query: 589 RGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLW 647
G + S D ++LW + +G+ I + D W++A ++ ATG VN++
Sbjct: 75 SGNIMASSSLDAHIRLWDLESGKQIRSIDAGPVDAWSVAFSPDSQHLATGSHVGKVNIF 133
Score = 83 (34.3 bits), Expect = 5.4e-09, Sum P(2) = 5.4e-09
Identities = 48/210 (22%), Positives = 89/210 (42%)
Query: 68 LSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVL 127
+S +LF H+ E +W + K +DG + + SG L KV
Sbjct: 1 MSTQYSILFKQEHAHEDAIWSVGWGK-----NSNDGSELVI----SGSLDDLV----KVW 47
Query: 128 VWDVDGGFCTHYFKGHK-GVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDK 186
W + +GH+ GVVS + P + ++ S S DA +R+WDL + K + ++D
Sbjct: 48 KWSDERLEMQWALEGHQLGVVS-VDVSPSGN--IMASSSLDAHIRLWDLESGKQIRSIDA 104
Query: 187 HFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTY-EMVEAVCAIPPGS--- 242
S+A + D L + VN++ + + ++ T + + ++ P G
Sbjct: 105 GPVDAWSVAFSPDSQHLATGSHVGKVNIFGVETGKKEYSLDTRGKFILSIAYSPDGKYLA 164
Query: 243 --AFDSFLSSYNQQTIKKKRRSLEIHFITV 270
A D ++ ++ T K +LE H + +
Sbjct: 165 SGAIDGIINIFDIAT-GKLLHTLEGHAMPI 193
>MGI|MGI:1917493 [details] [associations]
symbol:Wdr61 "WD repeat domain 61" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0016055 "Wnt receptor signaling pathway"
evidence=IEA] [GO:0016593 "Cdc73/Paf1 complex" evidence=ISO]
[GO:0032968 "positive regulation of transcription elongation from
RNA polymerase II promoter" evidence=ISO] [GO:0035327
"transcriptionally active chromatin" evidence=ISO] [GO:0045638
"negative regulation of myeloid cell differentiation" evidence=ISO]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0051571 "positive
regulation of histone H3-K4 methylation" evidence=ISO] [GO:0055087
"Ski complex" evidence=ISO] [GO:0080182 "histone H3-K4
trimethylation" evidence=ISO] [GO:2001162 "positive regulation of
histone H3-K79 methylation" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1917493 GO:GO:0016055
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0045944 GO:GO:0006351 GO:GO:0035327 GO:GO:0051571
GO:GO:0032968 GO:GO:0080182 GO:GO:0016593 GO:GO:0045638
GO:GO:2001162 GeneTree:ENSGT00700000104507 GO:GO:0055087 CTD:80349
HOGENOM:HOG000036765 HOVERGEN:HBG059813 KO:K12602 OMA:IATGSHH
OrthoDB:EOG4VMFFW EMBL:AF309554 EMBL:AK012342 EMBL:AK013114
EMBL:AK142498 EMBL:AK153862 EMBL:AK167706 EMBL:BC023026
IPI:IPI00112320 RefSeq:NP_001020546.1 RefSeq:NP_075680.1
UniGene:Mm.28437 ProteinModelPortal:Q9ERF3 SMR:Q9ERF3 IntAct:Q9ERF3
PhosphoSite:Q9ERF3 PaxDb:Q9ERF3 PRIDE:Q9ERF3
Ensembl:ENSMUST00000051822 Ensembl:ENSMUST00000121204 GeneID:66317
KEGG:mmu:66317 InParanoid:Q9ERF3 NextBio:321305 Bgee:Q9ERF3
CleanEx:MM_WDR61 Genevestigator:Q9ERF3
GermOnline:ENSMUSG00000061559 Uniprot:Q9ERF3
Length = 305
Score = 245 (91.3 bits), Expect = 2.2e-21, Sum P(2) = 2.2e-21
Identities = 74/263 (28%), Positives = 123/263 (46%)
Query: 386 MSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSES-RCCVGVGTGHMGAV 444
+ + L GH V+ +D +S + + S D +RLWD E+ + + G + A
Sbjct: 54 LELQWSLEGHQLGVVSVD---ISHTLPIAASSSLDAHIRLWDLENGKQMKSIDAGPVDA- 109
Query: 445 GAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAP 504
+AFS Q +L +G+ H KV F S E ++ + GK I S+A +P
Sbjct: 110 WTLAFSPDSQ-YLATGT--HMGKVNIFGVESGKKEYSLDTR--------GKFILSIAYSP 158
Query: 505 NDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWS 564
+ + +G+ D ++ + + T GH I S+ FSP Q+++TAS D IKI+
Sbjct: 159 DGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYD 218
Query: 565 ISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIW 624
+ + T GH S VL +F VS +D VK+W V T CI T+ H+D++W
Sbjct: 219 VQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCIHTFFDHQDQVW 278
Query: 625 ALAVGKKTEMFATGGSDALVNLW 647
+ + G D ++++
Sbjct: 279 GVKYNGNGSKIVSVGDDQEIHVY 301
Score = 221 (82.9 bits), Expect = 1.7e-16, P = 1.7e-16
Identities = 54/193 (27%), Positives = 93/193 (48%)
Query: 25 LVVSSDGSFIACACGES-INIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSRE 83
L S D ++A +NI + + + +++ I ++A SPD K L S
Sbjct: 112 LAFSPDSQYLATGTHMGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGI 171
Query: 84 IRVWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGH 143
I ++D++T K L + +GH P + P LL TA D + ++DV GH
Sbjct: 172 INIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGH 231
Query: 144 KGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTL 203
V ++ F PD D + S S D +V+VWD+ + C+ T H +V + +GS +
Sbjct: 232 ASWVLNVAFCPD-DTHFV-SSSSDKSVKVWDVGTRTCIHTFFDHQDQVWGVKYNGNGSKI 289
Query: 204 ISAGRDKVVNLWD 216
+S G D+ ++++D
Sbjct: 290 VSVGDDQEIHVYD 302
Score = 209 (78.6 bits), Expect = 1.4e-14, P = 1.4e-14
Identities = 50/181 (27%), Positives = 86/181 (47%)
Query: 42 INIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGH 101
I + DL N +I+ G LA SPD + L + H ++ ++ + + K S
Sbjct: 88 IRLWDLENGKQMKSIDAGPVDAWTLAFSPDSQYLATGTHMGKVNIFGVESGKKEYSLDTR 147
Query: 102 DGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLL 161
+ +A P G LA+ D + ++D+ G H +GH + S+ F PD+ LL
Sbjct: 148 GKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQ--LL 205
Query: 162 FSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYS 221
+ SDD ++++D+ TL H S V ++A D + +S+ DK V +WD+ +
Sbjct: 206 VTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRT 265
Query: 222 C 222
C
Sbjct: 266 C 266
Score = 162 (62.1 bits), Expect = 9.5e-09, Sum P(2) = 9.5e-09
Identities = 58/240 (24%), Positives = 100/240 (41%)
Query: 414 IVTGSKDNSVRLWD-SESRCCVGVGT-GHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSF 471
+VTGS D+ V++W + R + GH V +V S L S S D I++W
Sbjct: 35 VVTGSLDDLVKVWKWRDERLELQWSLEGHQLGVVSVDISHTLP-IAASSSLDAHIRLW-- 91
Query: 472 DGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVT 531
D E +K+ + A D +LA +P+ + TG+ ++ + +
Sbjct: 92 -----DLENGKQMKS---IDAGPVDAWTLAFSPDSQYLATGTHMGKVNIFGVESGKKEYS 143
Query: 532 FRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGA 591
+ I S+ +SP + + + + D I I+ I+ G L T EGH + +F
Sbjct: 144 LDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQ 203
Query: 592 QIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLWHDST 651
+V+ DG +K++ V+ T H + +A F + SD V +W T
Sbjct: 204 LLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGT 263
Score = 153 (58.9 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 47/200 (23%), Positives = 93/200 (46%)
Query: 365 EEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALS-SGKILIVTGSKDNSV 423
+ QYLA T++ +V ++ + S Y L + +L + A S GK L +G+ D +
Sbjct: 117 DSQYLATGTHMGKVNIFGVESGKKEYSLDTRGKFILSI---AYSPDGKYL-ASGAIDGII 172
Query: 424 RLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMN 483
++D + + GH + ++ FS Q LV+ S D IK++ Q N
Sbjct: 173 NIFDIATGKLLHTLEGHAMPIRSLTFSPDSQ-LLVTASDDGYIKIYDV--------QHAN 223
Query: 484 LKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVE 543
L ++ H + ++A P+D+ + S D++ VW + + TF H+ +W V+
Sbjct: 224 LAG--TLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCIHTFFDHQDQVWGVK 281
Query: 544 FSPVDQVVITASGDKTIKIW 563
++ +++ D+ I ++
Sbjct: 282 YNGNGSKIVSVGDDQEIHVY 301
Score = 148 (57.2 bits), Expect = 2.3e-07, P = 2.3e-07
Identities = 48/203 (23%), Positives = 90/203 (44%)
Query: 55 TIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPSG 114
++EG + ++ +S + SS IR+WDL K ++S A +A P
Sbjct: 59 SLEGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLENGKQMKSIDAGPVDAWTLAFSPDS 118
Query: 115 GLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWD 174
LAT KV ++ V+ G + + SI + PD L SG+ D + ++D
Sbjct: 119 QYLATGTHMGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDG--KYLASGAIDGIINIFD 176
Query: 175 LLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYEMVEA 234
+ K + TL+ H + S+ + D L++A D + ++D++ + T+ +
Sbjct: 177 IATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVL 236
Query: 235 VCAIPPGSAFDSFLSSYNQQTIK 257
A P F+SS + +++K
Sbjct: 237 NVAFCPDDTH--FVSSSSDKSVK 257
Score = 126 (49.4 bits), Expect = 6.9e-05, P = 6.9e-05
Identities = 37/150 (24%), Positives = 71/150 (47%)
Query: 505 NDSLVCTGSQDRTACVWRLPD--LVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKI 562
N V TGS D VW+ D L + GH+ G+ SV+ S + ++S D I++
Sbjct: 31 NIETVVTGSLDDLVKVWKWRDERLELQWSLEGHQLGVVSVDISHTLPIAASSSLDAHIRL 90
Query: 563 WSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGAD-GLVKLWTVRTGECIATYDKHED 621
W + +G +K+ + +F + +Q ++ G G V ++ V +G+ + D
Sbjct: 91 WDLENGKQMKSIDAGPVDAWTLAF-SPDSQYLATGTHMGKVNIFGVESGKKEYSLDTRGK 149
Query: 622 KIWALAVGKKTEMFATGGSDALVNLWHDST 651
I ++A + A+G D ++N++ +T
Sbjct: 150 FILSIAYSPDGKYLASGAIDGIINIFDIAT 179
Score = 111 (44.1 bits), Expect = 9.5e-09, Sum P(2) = 9.5e-09
Identities = 33/121 (27%), Positives = 56/121 (46%)
Query: 349 LVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALS 408
L G+ I L F + Q L A++ +++YD+ + + L+GH+ VL + C
Sbjct: 186 LEGHAMPIRSLTF-SPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDD 244
Query: 409 SGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKV 468
+ V+ S D SV++WD +R C+ H V V ++ +VS D I V
Sbjct: 245 TH---FVSSSSDKSVKVWDVGTRTCIHTFFDHQDQVWGVKYNGNGSK-IVSVGDDQEIHV 300
Query: 469 W 469
+
Sbjct: 301 Y 301
Score = 96 (38.9 bits), Expect = 9.5e-09, Sum P(2) = 9.5e-09
Identities = 28/136 (20%), Positives = 60/136 (44%)
Query: 84 IRVWDLSTLKCLRSW--KGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFK 141
++VW + W +GH + + + + A++ D + +WD++ G
Sbjct: 44 VKVWKWRDERLELQWSLEGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLENGKQMKSID 103
Query: 142 GHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGS 201
++ F PD+ L +G+ V ++ + + K +LD + S+A + DG
Sbjct: 104 AGPVDAWTLAFSPDSQ--YLATGTHMGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGK 161
Query: 202 TLISAGRDKVVNLWDL 217
L S D ++N++D+
Sbjct: 162 YLASGAIDGIINIFDI 177
Score = 39 (18.8 bits), Expect = 2.2e-21, Sum P(2) = 2.2e-21
Identities = 7/23 (30%), Positives = 13/23 (56%)
Query: 202 TLISAGRDKVVNLWDLRDYSCKL 224
T+++ D +V +W RD +L
Sbjct: 34 TVVTGSLDDLVKVWKWRDERLEL 56
>SGD|S000002304 [details] [associations]
symbol:COP1 "Alpha subunit of COPI vesicle coatomer complex"
species:4932 "Saccharomyces cerevisiae" [GO:0030126 "COPI vesicle
coat" evidence=IEA;ISS;IMP] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IMP] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0031410
"cytoplasmic vesicle" evidence=IEA] [GO:0006890 "retrograde
vesicle-mediated transport, Golgi to ER" evidence=IMP] [GO:0005794
"Golgi apparatus" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0005198
"structural molecule activity" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0030117
"membrane coat" evidence=IEA] [GO:0000139 "Golgi membrane"
evidence=IEA] [GO:0030663 "COPI-coated vesicle membrane"
evidence=IEA] [GO:0043130 "ubiquitin binding" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006692
InterPro:IPR010714 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053
Pfam:PF06957 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
SGD:S000002304 GO:GO:0006886 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005198 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:BK006938 GO:GO:0006888
GO:GO:0030126 GO:GO:0006890 GO:GO:0043130 EMBL:X97751
HOGENOM:HOG000195913 KO:K05236 InterPro:IPR016391 PIRSF:PIRSF003354
GeneTree:ENSGT00600000084501 OrthoDB:EOG40VZXP EMBL:Z46617
EMBL:X83754 EMBL:Z74193 EMBL:Z74192 PIR:S67692 RefSeq:NP_010136.1
PDB:3MKQ PDB:3MV2 PDB:3MV3 PDBsum:3MKQ PDBsum:3MV2 PDBsum:3MV3
ProteinModelPortal:P53622 SMR:P53622 DIP:DIP-2582N IntAct:P53622
MINT:MINT-422687 STRING:P53622 PaxDb:P53622 PeptideAtlas:P53622
EnsemblFungi:YDL145C GeneID:851410 KEGG:sce:YDL145C CYGD:YDL145c
OMA:YDQHNPF EvolutionaryTrace:P53622 NextBio:968591
Genevestigator:P53622 GermOnline:YDL145C Uniprot:P53622
Length = 1201
Score = 206 (77.6 bits), Expect = 2.3e-21, Sum P(2) = 2.3e-21
Identities = 44/161 (27%), Positives = 74/161 (45%)
Query: 57 EGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPSGGL 116
E S +A P + + S I++WD L ++ H+GP G+ HP+ +
Sbjct: 8 ESKSTRAKGIAFHPSRPWVLVALFSSTIQLWDYRMGTLLHRFEDHEGPVRGLDFHPTQPI 67
Query: 117 LATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLL 176
+AG D + VW +D C + GH V ++ FH + + S SDD T+R+W+
Sbjct: 68 FVSAGDDYTIKVWSLDTNKCLYTLTGHLDYVRTVFFHRELP--WIISASDDQTIRIWNWQ 125
Query: 177 AKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDL 217
+K +A L H V ++SA D+ + +WD+
Sbjct: 126 NRKEIACLTGHNHFVMCAQFHPTDDLIVSASLDETIRIWDI 166
Score = 179 (68.1 bits), Expect = 9.1e-14, Sum P(2) = 9.1e-14
Identities = 60/242 (24%), Positives = 105/242 (43%)
Query: 92 LKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSIL 151
+K L ++ A G+A HPS + A + +WD G H F+ H+G V +
Sbjct: 1 MKMLTKFESKSTRAKGIAFHPSRPWVLVALFSSTIQLWDYRMGTLLHRFEDHEGPVRGLD 60
Query: 152 FHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKV 211
FHP + + S DD T++VW L KC+ TL H V ++ + +ISA D+
Sbjct: 61 FHPT--QPIFVSAGDDYTIKVWSLDTNKCLYTLTGHLDYVRTVFFHRELPWIISASDDQT 118
Query: 212 VNLWDLRDYSCKLTVPTYEMVEAVCA-IPPGSAFDSFLSSYNQQTIKKKRRS-LEIHFIT 269
+ +W+ ++ ++ T +CA P D +S+ +TI+ S L
Sbjct: 119 IRIWNWQNRK-EIACLTGHNHFVMCAQFHPTD--DLIVSASLDETIRIWDISGLRKRHSA 175
Query: 270 VGERGIVRMWNADSACLYEQKSSDVTISFEMDDSKRGFTAATVLPSNQGLLCVTADQQLL 329
G +A L + D + F ++ RG A+ P+ ++ + D+Q+
Sbjct: 176 PGTSSFEEQMSAQQNLL-DGSLGDCVVKFILEGHTRGVNWASFHPTLPLIVSGSDDRQVK 234
Query: 330 LY 331
L+
Sbjct: 235 LW 236
Score = 158 (60.7 bits), Expect = 1.9e-07, P = 1.9e-07
Identities = 53/188 (28%), Positives = 82/188 (43%)
Query: 34 IACACGESINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLK 93
I+ + ++I I + N + + G + + P D L+ S+ IR+WD+S L+
Sbjct: 111 ISASDDQTIRIWNWQNRKEIACLTGHNHFVMCAQFHPTDDLIVSASLDETIRIWDISGLR 170
Query: 94 CLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYF--KGHKGVVSSIL 151
K H P + A + +L D G C F +GH V+
Sbjct: 171 -----KRHSAPG-------TSSFEEQMSAQQNLL--DGSLGDCVVKFILEGHTRGVNWAS 216
Query: 152 FHPDTDKSLLFSGSDDATVRVWDLLAKKC--VATLDKHFSRVTSMAITSDGSTLISAGRD 209
FHP L+ SGSDD V++W + A K V T H + V S+ + +IS G D
Sbjct: 217 FHPTLP--LIVSGSDDRQVKLWRMSATKAWEVDTCRGHTNNVDSVIFHPHQNLIISVGED 274
Query: 210 KVVNLWDL 217
K + +WDL
Sbjct: 275 KTLRVWDL 282
Score = 148 (57.2 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 39/146 (26%), Positives = 64/146 (43%)
Query: 421 NSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQ 480
++++LWD + H G V + F Q VS D+TIKVWS D
Sbjct: 33 STIQLWDYRMGTLLHRFEDHEGPVRGLDFHPT-QPIFVSAGDDYTIKVWSLD-------- 83
Query: 481 PMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIW 540
N K + H + ++ + + S D+T +W + + GH +
Sbjct: 84 -TN-KCLYTLTGHLDYVRTVFFHRELPWIISASDDQTIRIWNWQNRKEIACLTGHNHFVM 141
Query: 541 SVEFSPVDQVVITASGDKTIKIWSIS 566
+F P D ++++AS D+TI+IW IS
Sbjct: 142 CAQFHPTDDLIVSASLDETIRIWDIS 167
Score = 140 (54.3 bits), Expect = 3.0e-14, Sum P(2) = 3.0e-14
Identities = 43/164 (26%), Positives = 68/164 (41%)
Query: 41 SINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKG 100
+I + D ++ E + L P + S+G I+VW L T KCL + G
Sbjct: 34 TIQLWDYRMGTLLHRFEDHEGPVRGLDFHPTQPIFVSAGDDYTIKVWSLDTNKCLYTLTG 93
Query: 101 HDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSL 160
H + H + +A D+ + +W+ GH V FHP D L
Sbjct: 94 HLDYVRTVFFHRELPWIISASDDQTIRIWNWQNRKEIACLTGHNHFVMCAQFHPTDD--L 151
Query: 161 LFSGSDDATVRVWDL--LAKKCVATLDKHFS-RVTSMAITSDGS 201
+ S S D T+R+WD+ L K+ A F ++++ DGS
Sbjct: 152 IVSASLDETIRIWDISGLRKRHSAPGTSSFEEQMSAQQNLLDGS 195
Score = 138 (53.6 bits), Expect = 2.7e-05, P = 2.7e-05
Identities = 34/150 (22%), Positives = 60/150 (40%)
Query: 500 LAVAPNDSLVCTGSQDRTACVW--RLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGD 557
+A P+ V T +W R+ L+ F H+ + ++F P + ++A D
Sbjct: 17 IAFHPSRPWVLVALFSSTIQLWDYRMGTLLH--RFEDHEGPVRGLDFHPTQPIFVSAGDD 74
Query: 558 KTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYD 617
TIK+WS+ CL T GH V F I+S D +++W + + IA
Sbjct: 75 YTIKVWSLDTNKCLYTLTGHLDYVRTVFFHRELPWIISASDDQTIRIWNWQNRKEIACLT 134
Query: 618 KHEDKIWALAVGKKTEMFATGGSDALVNLW 647
H + ++ + D + +W
Sbjct: 135 GHNHFVMCAQFHPTDDLIVSASLDETIRIW 164
Score = 135 (52.6 bits), Expect = 2.3e-21, Sum P(2) = 2.3e-21
Identities = 30/125 (24%), Positives = 56/125 (44%)
Query: 523 LPDLVSVVTFRGHKRGI-WSVEFSPVDQVVITASGDKTIKIWSISDGSC--LKTFEGHTS 579
L D V GH RG+ W+ F P ++++ S D+ +K+W +S + T GHT+
Sbjct: 196 LGDCVVKFILEGHTRGVNWA-SFHPTLPLIVSGSDDRQVKLWRMSATKAWEVDTCRGHTN 254
Query: 580 SVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGG 639
+V F I+S G D +++W + + + + D+ W +A +F
Sbjct: 255 NVDSVIFHPHQNLIISVGEDKTLRVWDLDKRTPVKQFKRENDRFWLIAAHPHINLFGAAH 314
Query: 640 SDALV 644
++
Sbjct: 315 DSGIM 319
Score = 130 (50.8 bits), Expect = 7.6e-21, Sum P(2) = 7.6e-21
Identities = 27/91 (29%), Positives = 48/91 (52%)
Query: 487 KAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVS--VVTFRGHKRGIWSVEF 544
K ++ H + +N + P L+ +GS DR +WR+ + V T RGH + SV F
Sbjct: 202 KFILEGHTRGVNWASFHPTLPLIVSGSDDRQVKLWRMSATKAWEVDTCRGHTNNVDSVIF 261
Query: 545 SPVDQVVITASGDKTIKIWSISDGSCLKTFE 575
P ++I+ DKT+++W + + +K F+
Sbjct: 262 HPHQNLIISVGEDKTLRVWDLDKRTPVKQFK 292
Score = 128 (50.1 bits), Expect = 5.5e-13, Sum P(2) = 5.5e-13
Identities = 37/159 (23%), Positives = 70/159 (44%)
Query: 368 YLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWD 427
++ VA +Q++D + + H V LD + + V+ D ++++W
Sbjct: 25 WVLVALFSSTIQLWDYRMGTLLHRFEDHEGPVRGLD---FHPTQPIFVSAGDDYTIKVWS 81
Query: 428 SESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAK 487
++ C+ TGH+ V V F ++L +++S S D TI++W++ N K
Sbjct: 82 LDTNKCLYTLTGHLDYVRTVFFHRELP-WIISASDDQTIRIWNWQ----------NRKEI 130
Query: 488 AVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDL 526
A + H + P D L+ + S D T +W + L
Sbjct: 131 ACLTGHNHFVMCAQFHPTDDLIVSASLDETIRIWDISGL 169
Score = 127 (49.8 bits), Expect = 0.00041, P = 0.00041
Identities = 34/137 (24%), Positives = 62/137 (45%)
Query: 43 NIVD--LSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKC--LRSW 98
N++D L + +K +EG + + + P L+ S R++++W +S K + +
Sbjct: 190 NLLDGSLGDCVVKFILEGHTRGVNWASFHPTLPLIVSGSDDRQVKLWRMSATKAWEVDTC 249
Query: 99 KGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDK 158
+GH + HP L+ + G D+ + VWD+D FK I HP +
Sbjct: 250 RGHTNNVDSVIFHPHQNLIISVGEDKTLRVWDLDKRTPVKQFKRENDRFWLIAAHPHIN- 308
Query: 159 SLLFSGSDDATVRVWDL 175
LF + D+ + V+ L
Sbjct: 309 --LFGAAHDSGIMVFKL 323
Score = 97 (39.2 bits), Expect = 8.8e-10, Sum P(2) = 8.8e-10
Identities = 21/101 (20%), Positives = 43/101 (42%)
Query: 33 FIACACGESINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTL 92
F++ +I + L T+ G D + + + + S+ + IR+W+
Sbjct: 68 FVSAGDDYTIKVWSLDTNKCLYTLTGHLDYVRTVFFHRELPWIISASDDQTIRIWNWQNR 127
Query: 93 KCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDG 133
K + GH+ + HP+ L+ +A D + +WD+ G
Sbjct: 128 KEIACLTGHNHFVMCAQFHPTDDLIVSASLDETIRIWDISG 168
Score = 90 (36.7 bits), Expect = 1.1e-16, Sum P(2) = 1.1e-16
Identities = 26/108 (24%), Positives = 44/108 (40%)
Query: 439 GHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDIN 498
GH V +F L +VSGS D +K+W A + + H +++
Sbjct: 207 GHTRGVNWASFHPTLP-LIVSGSDDRQVKLWRMS-----ATKAWEVDT---CRGHTNNVD 257
Query: 499 SLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSP 546
S+ P+ +L+ + +D+T VW L V F+ W + P
Sbjct: 258 SVIFHPHQNLIISVGEDKTLRVWDLDKRTPVKQFKRENDRFWLIAAHP 305
>UNIPROTKB|Q2TBP4 [details] [associations]
symbol:POC1A "POC1 centriolar protein homolog A"
species:9913 "Bos taurus" [GO:0005814 "centriole" evidence=ISS]
[GO:0005932 "microtubule basal body" evidence=ISS] [GO:0030030
"cell projection organization" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0030030
GeneTree:ENSGT00700000104282 EMBL:BC109862 IPI:IPI00701787
RefSeq:NP_001033649.1 UniGene:Bt.4084 ProteinModelPortal:Q2TBP4
Ensembl:ENSBTAT00000001927 GeneID:534489 KEGG:bta:534489 CTD:25886
HOVERGEN:HBG057502 InParanoid:Q2TBP4 KO:K16482 OMA:ANHVEFH
OrthoDB:EOG412M5H NextBio:20876416 Uniprot:Q2TBP4
Length = 407
Score = 274 (101.5 bits), Expect = 2.3e-21, P = 2.3e-21
Identities = 77/303 (25%), Positives = 137/303 (45%)
Query: 345 LSKRLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDT 404
L + G+ + + + F +Q LA + + V+ + + +Y AGH + V C++
Sbjct: 11 LERHFKGHRDAVTSVDFSLNTKQ-LASGSMDSCLMVWHMKPQTRAYRFAGHKDAVTCVNF 69
Query: 405 CALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDH 464
SG +L +GS+D +VR+W + V H V +V F Q+F V+ S D
Sbjct: 70 SP--SGHLL-ASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQSF-VTASDDK 125
Query: 465 TIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLP 524
T+KVWS K ++ H + +P+ L+ + S D+T +W
Sbjct: 126 TVKVWSTH----------RQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKT 175
Query: 525 DLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRA 584
V ++ H + V+F P + A D T+K+W + L+ ++ H+++V
Sbjct: 176 SRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNAL 235
Query: 585 SFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALV 644
SF G +V+ +D +K+ + G + T H+ +A + E FA+GGSD V
Sbjct: 236 SFHPSGNYLVTASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQV 295
Query: 645 NLW 647
+W
Sbjct: 296 MVW 298
Score = 243 (90.6 bits), Expect = 1.1e-17, P = 1.1e-17
Identities = 56/203 (27%), Positives = 101/203 (49%)
Query: 29 SDG-SFIACACGESINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRVW 87
SDG SF+ + +++ + ++ + + SPD +L+ S+ + +++W
Sbjct: 113 SDGQSFVTASDDKTVKVWSTHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLW 172
Query: 88 DLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVV 147
D ++ +C+ S+ H G + HPSG +A AG D V VWDV +++ H V
Sbjct: 173 DKTSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDVRTHRLLQHYQLHSAAV 232
Query: 148 SSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAG 207
+++ FHP + L + S D+T+++ DL+ + + TL H T++A + G S G
Sbjct: 233 NALSFHPSGN--YLVTASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGG 290
Query: 208 RDKVVNLW----DLRDYSCKLTV 226
D+ V +W D+ DY L V
Sbjct: 291 SDEQVMVWKSNFDIVDYGEVLRV 313
Score = 198 (74.8 bits), Expect = 1.3e-12, P = 1.3e-12
Identities = 52/174 (29%), Positives = 82/174 (47%)
Query: 51 SIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMAC 110
S++ +G D +T++ S + K L S + VW + + GH +
Sbjct: 10 SLERHFKGHRDAVTSVDFSLNTKQLASGSMDSCLMVWHMKPQTRAYRFAGHKDAVTCVNF 69
Query: 111 HPSGGLLATAGADRKVLVW--DVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDA 168
PSG LLA+ D+ V +W +V G + F+ H V S+ F D +S + + SDD
Sbjct: 70 SPSGHLLASGSRDKTVRIWVPNVKGE--STVFRAHTATVRSVHFCSD-GQSFV-TASDDK 125
Query: 169 TVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSC 222
TV+VW +K + +L +H + V + DG ++SA DK V LWD C
Sbjct: 126 TVKVWSTHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSREC 179
Score = 175 (66.7 bits), Expect = 4.8e-10, P = 4.8e-10
Identities = 45/193 (23%), Positives = 86/193 (44%)
Query: 28 SSDGSFIACACGESINIVDLSNASIKSTI-EGGSDTITALALSPDDKLLFSSGHSREIRV 86
S G +A + + + N +ST+ + T+ ++ D + ++ + ++V
Sbjct: 70 SPSGHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKTVKV 129
Query: 87 WDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGV 146
W K L S H P G L+ +A D+ V +WD C H + H G
Sbjct: 130 WSTHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGF 189
Query: 147 VSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISA 206
V+ + FHP + + +G D+ TV+VWD+ + + H + V +++ G+ L++A
Sbjct: 190 VTYVDFHP-SGTCIAAAGMDN-TVKVWDVRTHRLLQHYQLHSAAVNALSFHPSGNYLVTA 247
Query: 207 GRDKVVNLWDLRD 219
D + + DL +
Sbjct: 248 SSDSTLKILDLME 260
Score = 126 (49.4 bits), Expect = 0.00012, P = 0.00012
Identities = 72/305 (23%), Positives = 122/305 (40%)
Query: 139 YFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITS 198
+FKGH+ V+S+ F +T + L SGS D+ + VW + + H VT + +
Sbjct: 14 HFKGHRDAVTSVDFSLNTKQ--LASGSMDSCLMVWHMKPQTRAYRFAGHKDAVTCVNFSP 71
Query: 199 DGSTLISAGRDKVVNLW--DLRDYSCKLTVPTYEMVEAVCAIPPGSAFDSFLSSYNQQTI 256
G L S RDK V +W +++ S T V +V G SF+++ + +T+
Sbjct: 72 SGHLLASGSRDKTVRIWVPNVKGESTVFRAHT-ATVRSVHFCSDGQ---SFVTASDDKTV 127
Query: 257 KKKRRSLEIHFITVGER-GIVRM--WNADSACLYEQKSSDVTISFEMDDSKR-------- 305
K + ++ + VR ++ D L S D T+ D + R
Sbjct: 128 KVWSTHRQKFLFSLSQHINWVRCAKFSPDGR-LIVSASDDKTVKL-WDKTSRECVHSYCE 185
Query: 306 --GFTAATVLPSNQGLLCVTADQQLLLYTTVEVPEKKMELILSKRLVGYNEEILDLKFLG 363
GF T + + C+ A + TV+V + + +L + ++ + L F
Sbjct: 186 HGGFV--TYVDFHPSGTCIAAAG---MDNTVKVWDVRTHRLLQHYQL-HSAAVNALSF-H 238
Query: 364 EEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSV 423
YL A++ +++ DL Y L GH T A S +G D V
Sbjct: 239 PSGNYLVTASSDSTLKILDLMEGRLLYTLHGHQGPAT---TVAFSRTGEYFASGGSDEQV 295
Query: 424 RLWDS 428
+W S
Sbjct: 296 MVWKS 300
>UNIPROTKB|F1PU93 [details] [associations]
symbol:COPA "Coatomer subunit alpha" species:9615 "Canis
lupus familiaris" [GO:0030126 "COPI vesicle coat" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0005198
"structural molecule activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR010714
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053 Pfam:PF06957
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0006886
GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005198 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030126 InterPro:IPR016391 PIRSF:PIRSF003354
GeneTree:ENSGT00600000084501 OMA:FWVLGAH EMBL:AAEX03018465
EMBL:AAEX03018466 Ensembl:ENSCAFT00000019919 Uniprot:F1PU93
Length = 1214
Score = 218 (81.8 bits), Expect = 6.4e-14, P = 6.4e-14
Identities = 60/218 (27%), Positives = 104/218 (47%)
Query: 377 QVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGV 436
+++V++ C + L GH + + T I++ S D ++R+W+ +SR CV V
Sbjct: 64 KIKVWNYKLRRCLFTLLGHLDYIR---TTFFHHEYPWILSASDDQTIRVWNWQSRTCVCV 120
Query: 437 GTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGL-----------SD-------DA 478
TGH V F ++ +VS S D T++VW GL SD D
Sbjct: 121 LTGHNHYVMCAQFHPS-EDLVVSASLDQTVRVWDISGLRKKNLSPGAVESDVRGITGVDL 179
Query: 479 EQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVS--VVTFRGHK 536
+ K V+ H + +N A P L+ +G+ DR +WR+ + + V T RGH
Sbjct: 180 FGTTDAVVKHVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNESKAWEVDTCRGHY 239
Query: 537 RGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTF 574
+ F P +++++ S DK+I++W +S + ++TF
Sbjct: 240 NNVSCAVFHPRQELILSNSEDKSIRVWDMSKRTGVQTF 277
Score = 190 (71.9 bits), Expect = 2.7e-21, Sum P(2) = 2.7e-21
Identities = 43/152 (28%), Positives = 67/152 (44%)
Query: 66 LALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRK 125
L+ P + SS H+ I++W + + HDGP G+ H L + G D K
Sbjct: 5 LSFHPKRPWILSSLHNGVIQLWTTGWCTLIDKFDEHDGPVRGIDFHKQQPLFVSGGDDYK 64
Query: 126 VLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLD 185
+ VW+ C GH + + FH + + S SDD T+RVW+ ++ CV L
Sbjct: 65 IKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYP--WILSASDDQTIRVWNWQSRTCVCVLT 122
Query: 186 KHFSRVTSMAITSDGSTLISAGRDKVVNLWDL 217
H V ++SA D+ V +WD+
Sbjct: 123 GHNHYVMCAQFHPSEDLVVSASLDQTVRVWDI 154
Score = 151 (58.2 bits), Expect = 2.7e-21, Sum P(2) = 2.7e-21
Identities = 35/125 (28%), Positives = 62/125 (49%)
Query: 525 DLVSVVTFRGHKRGI-WSVEFSPVDQVVITASGDKTIKIWSISDGSC--LKTFEGHTSSV 581
D V GH RG+ W+ F P ++++ + D+ +KIW +++ + T GH ++V
Sbjct: 184 DAVVKHVLEGHDRGVNWAA-FHPTMPLIVSGADDRQVKIWRMNESKAWEVDTCRGHYNNV 242
Query: 582 LRASFLTRGAQIVSCGADGLVKLWTV--RTGECIATYDKHEDKIWALAVGKKTEMFATGG 639
A F R I+S D +++W + RTG + T+ + D+ W LA +FA G
Sbjct: 243 SCAVFHPRQELILSNSEDKSIRVWDMSKRTG--VQTFRRDHDRFWVLAAHPNLNLFAAGH 300
Query: 640 SDALV 644
++
Sbjct: 301 DGGMI 305
Score = 135 (52.6 bits), Expect = 5.7e-05, P = 5.7e-05
Identities = 56/235 (23%), Positives = 95/235 (40%)
Query: 414 IVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDG 473
I++ + ++LW + + H G V + F K+ Q VSG D+ IKVW++
Sbjct: 14 ILSSLHNGVIQLWTTGWCTLIDKFDEHDGPVRGIDFHKQ-QPLFVSGGDDYKIKVWNYK- 71
Query: 474 LSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFR 533
L + + H I + + + S D+T VW V
Sbjct: 72 LR---------RCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVWNWQSRTCVCVLT 122
Query: 534 GHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFE-GHTSSVLRASFLTRGAQ 592
GH + +F P + +V++AS D+T+++W IS G K G S +R +T G
Sbjct: 123 GHNHYVMCAQFHPSEDLVVSASLDQTVRVWDIS-GLRKKNLSPGAVESDVRG--IT-GVD 178
Query: 593 IVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLW 647
+ D +VK + +D+ + WA A + +G D V +W
Sbjct: 179 LFGT-TDAVVK-------HVLEGHDRGVN--WA-AFHPTMPLIVSGADDRQVKIW 222
Score = 132 (51.5 bits), Expect = 0.00012, P = 0.00012
Identities = 61/286 (21%), Positives = 125/286 (43%)
Query: 108 MACHPSGGLLATAGADRKVLVWDVDGGFCT--HYFKGHKGVVSSILFHPDTDKSLLFSGS 165
++ HP + ++ + + +W G+CT F H G V I FH + L SG
Sbjct: 5 LSFHPKRPWILSSLHNGVIQLWTT--GWCTLIDKFDEHDGPVRGIDFHKQ--QPLFVSGG 60
Query: 166 DDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLT 225
DD ++VW+ ++C+ TL H + + + ++SA D+ + +W+ + +C +
Sbjct: 61 DDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVWNWQSRTC-VC 119
Query: 226 VPTYEMVEAVCA-IPPGSAFDSFLSSYNQQTIKK------KRRSLEIHFITVGERGIVRM 278
V T +CA P D +S+ QT++ ++++L + RGI
Sbjct: 120 VLTGHNHYVMCAQFHPSE--DLVVSASLDQTVRVWDISGLRKKNLSPGAVESDVRGIT-- 175
Query: 279 WNADSACLYEQKSSDVTISFEMDDSKRGFTAATVLPSNQGLLCVTADQQLLLYTTVEVPE 338
D L+ ++D + ++ RG A P+ ++ D+Q+ ++ E
Sbjct: 176 -GVD---LFG--TTDAVVKHVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNE--S 227
Query: 339 KKMELILSKRLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLS 384
K E+ + G+ + F +E L+ + + + ++V+D+S
Sbjct: 228 KAWEVDTCR---GHYNNVSCAVFHPRQELILSNSED-KSIRVWDMS 269
Score = 131 (51.2 bits), Expect = 0.00015, P = 0.00015
Identities = 34/113 (30%), Positives = 54/113 (47%)
Query: 99 KGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHY--FKGHKGVVSSILFHPDT 156
+GHD A HP+ L+ + DR+V +W ++ +GH VS +FHP
Sbjct: 192 EGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNESKAWEVDTCRGHYNNVSCAVFHPRQ 251
Query: 157 DKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRD 209
+ L+ S S+D ++RVWD+ + V T + R +A L +AG D
Sbjct: 252 E--LILSNSEDKSIRVWDMSKRTGVQTFRRDHDRFWVLA-AHPNLNLFAAGHD 301
Score = 126 (49.4 bits), Expect = 0.00053, P = 0.00053
Identities = 41/180 (22%), Positives = 76/180 (42%)
Query: 40 ESINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWK 99
++I + + + + + G + + P + L+ S+ + +RVWD+S L+ K
Sbjct: 105 QTIRVWNWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDISGLR-----K 159
Query: 100 GHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKS 159
+ P G G+ G D ++ H +GH V+ FHP
Sbjct: 160 KNLSP--GAVESDVRGI---TGVD----LFGTTDAVVKHVLEGHDRGVNWAAFHPTMP-- 208
Query: 160 LLFSGSDDATVRVWDLLAKKC--VATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDL 217
L+ SG+DD V++W + K V T H++ V+ ++S DK + +WD+
Sbjct: 209 LIVSGADDRQVKIWRMNESKAWEVDTCRGHYNNVSCAVFHPRQELILSNSEDKSIRVWDM 268
Score = 99 (39.9 bits), Expect = 1.1e-11, Sum P(2) = 1.1e-11
Identities = 23/79 (29%), Positives = 37/79 (46%)
Query: 55 TIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPSG 114
T+ G D I + + S+ + IRVW+ + C+ GH+ + HPS
Sbjct: 78 TLLGHLDYIRTTFFHHEYPWILSASDDQTIRVWNWQSRTCVCVLTGHNHYVMCAQFHPSE 137
Query: 115 GLLATAGADRKVLVWDVDG 133
L+ +A D+ V VWD+ G
Sbjct: 138 DLVVSASLDQTVRVWDISG 156
>UNIPROTKB|B4LJT7 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7244 "Drosophila virilis"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016226 EMBL:CH940648 OMA:SWKCVCT OrthoDB:EOG45DV4X
RefSeq:XP_002049403.1 ProteinModelPortal:B4LJT7 STRING:B4LJT7
EnsemblMetazoa:FBtr0237487 GeneID:6626094 KEGG:dvi:Dvir_GJ21562
FlyBase:FBgn0208682 InParanoid:B4LJT7 Uniprot:B4LJT7
Length = 331
Score = 211 (79.3 bits), Expect = 2.9e-21, Sum P(2) = 2.9e-21
Identities = 61/194 (31%), Positives = 91/194 (46%)
Query: 32 SFIACACGESINIVDLS-NASIKSTI--EGGSDTITALALSPDDKLLFSSGHSREIRVWD 88
SF +C ++I I LS N TI +G TI + SP + L S+ +W
Sbjct: 28 SFASCGEDKAIRIWSLSGNTWTTKTILSDGHKRTIREVRWSPCGEYLASASFDATTAIW- 86
Query: 89 LSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGG--F-CTHYFKGHKG 145
S +C + +GH+ ++ SGGLLAT D+ V +W+V G F C H
Sbjct: 87 -SKHECTATLEGHENEVKSVSWSRSGGLLATCSRDKSVWIWEVAGDDEFECAAVLNAHSQ 145
Query: 146 VVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKK----CVATLDKHFSRVTSMAITSDGS 201
V +++HP K +L S S D T++++ A C ATL H S V S+ +DG
Sbjct: 146 DVKRVVWHPT--KEVLASASYDNTIKMFAESALDSDWDCTATLSSHTSTVWSIDFDADGE 203
Query: 202 TLISAGRDKVVNLW 215
L+S D + +W
Sbjct: 204 RLVSCSDDATLKIW 217
Score = 178 (67.7 bits), Expect = 1.2e-10, P = 1.2e-10
Identities = 49/217 (22%), Positives = 89/217 (41%)
Query: 439 GHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVA-AHGKDI 497
GH G + VA+ K +F G D I++WS G + K +++ H + I
Sbjct: 12 GHKGRIWGVAWHPKGNSFASCGE-DKAIRIWSLSGNT--------WTTKTILSDGHKRTI 62
Query: 498 NSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGD 557
+ +P + + S D T +W + + T GH+ + SV +S ++ T S D
Sbjct: 63 REVRWSPCGEYLASASFDATTAIWSKHECTA--TLEGHENEVKSVSWSRSGGLLATCSRD 120
Query: 558 KTIKIWSIS---DGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRT----G 610
K++ IW ++ + C H+ V R + + S D +K++
Sbjct: 121 KSVWIWEVAGDDEFECAAVLNAHSQDVKRVVWHPTKEVLASASYDNTIKMFAESALDSDW 180
Query: 611 ECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLW 647
+C AT H +W++ E + DA + +W
Sbjct: 181 DCTATLSSHTSTVWSIDFDADGERLVSCSDDATLKIW 217
Score = 175 (66.7 bits), Expect = 8.8e-17, Sum P(2) = 8.8e-17
Identities = 49/166 (29%), Positives = 78/166 (46%)
Query: 99 KGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTH---YFKGHKGVVSSILFHPD 155
+GH G G+A HP G A+ G D+ + +W + G T GHK + + + P
Sbjct: 11 QGHKGRIWGVAWHPKGNSFASCGEDKAIRIWSLSGNTWTTKTILSDGHKRTIREVRWSPC 70
Query: 156 TDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLW 215
+ L S S DAT +W +C ATL+ H + V S++ + G L + RDK V +W
Sbjct: 71 GE--YLASASFDATTAIWS--KHECTATLEGHENEVKSVSWSRSGGLLATCSRDKSVWIW 126
Query: 216 DLR---DYSCKLTVPTYEM-VEAVCAIPPGSAFDSFLSSYNQQTIK 257
++ ++ C + + V+ V P S +SY+ TIK
Sbjct: 127 EVAGDDEFECAAVLNAHSQDVKRVVWHPTKEVLAS--ASYDN-TIK 169
Score = 175 (66.7 bits), Expect = 2.7e-10, P = 2.7e-10
Identities = 55/219 (25%), Positives = 94/219 (42%)
Query: 419 KDNSVRLWDSESRCCVG---VGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLS 475
+D ++R+W + GH + V +S +L S S D T +WS
Sbjct: 34 EDKAIRIWSLSGNTWTTKTILSDGHKRTIREVRWSP-CGEYLASASFDATTAIWS----- 87
Query: 476 DDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLP---DLVSVVTF 532
+ A + H ++ S++ + + L+ T S+D++ +W + +
Sbjct: 88 -------KHECTATLEGHENEVKSVSWSRSGGLLATCSRDKSVWIWEVAGDDEFECAAVL 140
Query: 533 RGHKRGIWSVEFSPVDQVVITASGDKTIKIWSIS----DGSCLKTFEGHTSSVLRASFLT 588
H + + V + P +V+ +AS D TIK+++ S D C T HTS+V F
Sbjct: 141 NAHSQDVKRVVWHPTKEVLASASYDNTIKMFAESALDSDWDCTATLSSHTSTVWSIDFDA 200
Query: 589 RGAQIVSCGADGLVKLWTV-RTGEC--IATYDKHEDKIW 624
G ++VSC D +K+W G IAT DK +W
Sbjct: 201 DGERLVSCSDDATLKIWRAYHPGNDAGIATPDK--TTVW 237
Score = 154 (59.3 bits), Expect = 6.3e-08, P = 6.3e-08
Identities = 43/164 (26%), Positives = 69/164 (42%)
Query: 493 HGKDINSLAVAPNDSLVCTGSQDRTACVWRLPD---LVSVVTFRGHKRGIWSVEFSPVDQ 549
H I +A P + + +D+ +W L + GHKR I V +SP +
Sbjct: 13 HKGRIWGVAWHPKGNSFASCGEDKAIRIWSLSGNTWTTKTILSDGHKRTIREVRWSPCGE 72
Query: 550 VVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRT 609
+ +AS D T IWS + C T EGH + V S+ G + +C D V +W V
Sbjct: 73 YLASASFDATTAIWSKHE--CTATLEGHENEVKSVSWSRSGGLLATCSRDKSVWIWEVAG 130
Query: 610 G---ECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLWHDS 650
EC A + H + + E+ A+ D + ++ +S
Sbjct: 131 DDEFECAAVLNAHSQDVKRVVWHPTKEVLASASYDNTIKMFAES 174
Score = 148 (57.2 bits), Expect = 2.9e-07, P = 2.9e-07
Identities = 34/120 (28%), Positives = 57/120 (47%)
Query: 531 TFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGS-CLKTF--EGHTSSVLRASFL 587
T +GHK IW V + P + DK I+IWS+S + KT +GH ++ +
Sbjct: 9 TLQGHKGRIWGVAWHPKGNSFASCGEDKAIRIWSLSGNTWTTKTILSDGHKRTIREVRWS 68
Query: 588 TRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLW 647
G + S D +W+ EC AT + HE+++ +++ + + AT D V +W
Sbjct: 69 PCGEYLASASFDATTAIWSKH--ECTATLEGHENEVKSVSWSRSGGLLATCSRDKSVWIW 126
Score = 121 (47.7 bits), Expect = 6.5e-09, Sum P(2) = 6.5e-09
Identities = 62/231 (26%), Positives = 97/231 (41%)
Query: 367 QYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLW 426
+YLA A+ ++ S C+ L GH V + + + S G L+ T S+D SV +W
Sbjct: 72 EYLASASFDATTAIW--SKHECTATLEGHENEVKSV-SWSRSGG--LLATCSRDKSVWIW 126
Query: 427 ----DSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPM 482
D E C V H V V + + L S S D+TIK+++ L D +
Sbjct: 127 EVAGDDEFECAA-VLNAHSQDVKRVVWHPT-KEVLASASYDNTIKMFAESALDSDWD--- 181
Query: 483 NLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRL-----------PDLVSV-- 529
A +++H + S+ + + + S D T +WR PD +V
Sbjct: 182 ---CTATLSSHTSTVWSIDFDADGERLVSCSDDATLKIWRAYHPGNDAGIATPDKTTVWK 238
Query: 530 --VTFRG-HKRGIWSVEFSPVDQVVITASGDKTIKIWS-ISDGSC-LKTFE 575
T G H R I+ V + ++ +A GD I+I+ SD TFE
Sbjct: 239 CVCTLSGEHSRAIYDVSWCKQTGLIASACGDDGIRIFKECSDSKRDAPTFE 289
Score = 104 (41.7 bits), Expect = 2.9e-21, Sum P(2) = 2.9e-21
Identities = 47/160 (29%), Positives = 70/160 (43%)
Query: 462 SDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAP-NDSLVCTGSQDRTACV 520
S HT VWS D D E+ ++ A + A P ND+ + T D+T V
Sbjct: 187 SSHTSTVWSID-FDADGERLVSCSDDATLKIWR------AYHPGNDAGIAT--PDKTT-V 236
Query: 521 WRLPDLVSVVTFRG-HKRGIWSVEFSPVDQVVITASGDKTIKIWS-ISDGSC-LKTFE-- 575
W+ V T G H R I+ V + ++ +A GD I+I+ SD TFE
Sbjct: 237 WKC-----VCTLSGEHSRAIYDVSWCKQTGLIASACGDDGIRIFKECSDSKRDAPTFELL 291
Query: 576 -----GHTSSVLRASF--LTRGAQIVSCGADGLVKLWTVR 608
H V + +T G Q++SC DG +K+W ++
Sbjct: 292 TAEESAHEQDVNAVEWNPVTAG-QLISCSDDGTIKIWKLQ 330
Score = 88 (36.0 bits), Expect = 6.5e-09, Sum P(2) = 6.5e-09
Identities = 26/96 (27%), Positives = 41/96 (42%)
Query: 138 HYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVA-TL--DKHFSRVTSM 194
H +GHKG + + +HP + S G D A +R+W L T+ D H + +
Sbjct: 8 HTLQGHKGRIWGVAWHPKGN-SFASCGEDKA-IRIWSLSGNTWTTKTILSDGHKRTIREV 65
Query: 195 AITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYE 230
+ G L SA D +W + C T+ +E
Sbjct: 66 RWSPCGEYLASASFDATTAIWS--KHECTATLEGHE 99
Score = 78 (32.5 bits), Expect = 4.4e-14, Sum P(2) = 4.4e-14
Identities = 35/151 (23%), Positives = 64/151 (42%)
Query: 433 CVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDA-----EQPMNLKAK 487
C + H V ++ F + LVS S D T+K+W +DA ++ K
Sbjct: 182 CTATLSSHTSTVWSIDFDADGER-LVSCSDDATLKIWRAYHPGNDAGIATPDKTTVWKCV 240
Query: 488 AVVAA-HGKDINSLAVAPNDSLVCTGSQDRTACVWR-LPDLV-SVVTFR-------GHKR 537
++ H + I ++ L+ + D +++ D TF H++
Sbjct: 241 CTLSGEHSRAIYDVSWCKQTGLIASACGDDGIRIFKECSDSKRDAPTFELLTAEESAHEQ 300
Query: 538 GIWSVEFSPVDQ-VVITASGDKTIKIWSISD 567
+ +VE++PV +I+ S D TIKIW + +
Sbjct: 301 DVNAVEWNPVTAGQLISCSDDGTIKIWKLQE 331
Score = 60 (26.2 bits), Expect = 1.1e-16, Sum P(2) = 1.1e-16
Identities = 25/92 (27%), Positives = 41/92 (44%)
Query: 388 CSYVLAG-HSEIVLCLDTCALSSGKILIVTGSKDNSVRLWD--SESR-------CCVGVG 437
C L+G HS + + C +G LI + D+ +R++ S+S+
Sbjct: 239 CVCTLSGEHSRAIYDVSWCK-QTG--LIASACGDDGIRIFKECSDSKRDAPTFELLTAEE 295
Query: 438 TGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVW 469
+ H V AV ++ L+S S D TIK+W
Sbjct: 296 SAHEQDVNAVEWNPVTAGQLISCSDDGTIKIW 327
>WB|WBGene00003009 [details] [associations]
symbol:lin-23 species:6239 "Caenorhabditis elegans"
[GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0040015 "negative regulation of multicellular organism growth"
evidence=IMP] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0040035 "hermaphrodite
genitalia development" evidence=IMP] [GO:0010171 "body
morphogenesis" evidence=IMP] [GO:0006898 "receptor-mediated
endocytosis" evidence=IMP] [GO:0008340 "determination of adult
lifespan" evidence=IMP] [GO:0048812 "neuron projection
morphogenesis" evidence=IMP] [GO:0008285 "negative regulation of
cell proliferation" evidence=IMP] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 InterPro:IPR021977 Pfam:PF00400 Pfam:PF12125
PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256
SMART:SM00320 SMART:SM01028 GO:GO:0005634 GO:GO:0008340
GO:GO:0009792 GO:GO:0006898 GO:GO:0005737 GO:GO:0040007
GO:GO:0040010 GO:GO:0008285 GO:GO:0051301 GO:GO:0002119
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0010171 GO:GO:0040011 GO:GO:0048812 SUPFAM:SSF81383
GO:GO:0007049 GO:GO:0040035 GO:GO:0040015 EMBL:FO080748
HOGENOM:HOG000006638 KO:K03362 GeneTree:ENSGT00690000101849
EMBL:AF275253 PIR:T16607 RefSeq:NP_495285.1 UniGene:Cel.17632
ProteinModelPortal:Q09990 SMR:Q09990 STRING:Q09990 PaxDb:Q09990
EnsemblMetazoa:K10B2.1 GeneID:174058 KEGG:cel:CELE_K10B2.1
UCSC:K10B2.1 CTD:174058 WormBase:K10B2.1 InParanoid:Q09990
OMA:IKVWSMD NextBio:882327 Uniprot:Q09990
Length = 665
Score = 287 (106.1 bits), Expect = 3.3e-21, Sum P(2) = 3.3e-21
Identities = 70/240 (29%), Positives = 127/240 (52%)
Query: 414 IVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDG 473
IV+G +DN++++WD + C + +GH G+V + + ++ ++SGSSD T++VW
Sbjct: 235 IVSGLRDNTIKIWDRKDYSCSRILSGHTGSVLCLQYDNRV---IISGSSDATVRVW---- 287
Query: 474 LSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSV--VT 531
D E +K + H + + L A + ++ T S+DR+ VW D+VS +T
Sbjct: 288 ---DVETGECIKT---LIHHCEAVLHLRFA--NGIMVTCSKDRSIAVW---DMVSPRDIT 336
Query: 532 FR----GHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFL 587
R GH+ + V+F D+ +++ASGD+TIK+WS+ ++T GH + A
Sbjct: 337 IRRVLVGHRAAVNVVDFD--DRYIVSASGDRTIKVWSMDTLEFVRTLAGHRRGI--ACLQ 392
Query: 588 TRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLW 647
RG +VS +D ++LW + +G C+ + HE+ + + +K +G D + +W
Sbjct: 393 YRGRLVVSGSSDNTIRLWDIHSGVCLRVLEGHEELVRCIRFDEKR--IVSGAYDGKIKVW 450
Score = 251 (93.4 bits), Expect = 3.5e-17, Sum P(2) = 3.5e-17
Identities = 63/196 (32%), Positives = 102/196 (52%)
Query: 413 LIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFD 472
+I++GS D +VR+WD E+ C+ H AV + F+ + +V+ S D +I VW
Sbjct: 274 VIISGSSDATVRVWDVETGECIKTLIHHCEAVLHLRFANGI---MVTCSKDRSIAVW--- 327
Query: 473 GLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTF 532
D P ++ + V+ H +N V +D + + S DRT VW + L V T
Sbjct: 328 ----DMVSPRDITIRRVLVGHRAAVN--VVDFDDRYIVSASGDRTIKVWSMDTLEFVRTL 381
Query: 533 RGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQ 592
GH+RGI +++ ++V++ S D TI++W I G CL+ EGH V F + +
Sbjct: 382 AGHRRGIACLQYR--GRLVVSGSSDNTIRLWDIHSGVCLRVLEGHEELVRCIRFDEK--R 437
Query: 593 IVSCGADGLVKLWTVR 608
IVS DG +K+W ++
Sbjct: 438 IVSGAYDGKIKVWDLQ 453
Score = 227 (85.0 bits), Expect = 1.6e-14, Sum P(2) = 1.6e-14
Identities = 81/307 (26%), Positives = 141/307 (45%)
Query: 315 SNQGLLCVTADQQLLLY----TTVEVPEKKMELILSKRLVGYNEEILDLKFLGEEEQYLA 370
+++G+ C+ D ++ T+++ ++K + S+ L G+ +L L++ + + +
Sbjct: 221 NSKGVYCLQYDDDKIVSGLRDNTIKIWDRK-DYSCSRILSGHTGSVLCLQY---DNRVII 276
Query: 371 VATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSES 430
++ V+V+D+ + C L H E VL L ++G ++VT SKD S+ +WD S
Sbjct: 277 SGSSDATVRVWDVETGECIKTLIHHCEAVLHL---RFANG--IMVTCSKDRSIAVWDMVS 331
Query: 431 RCCVGVG---TGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAK 487
+ + GH AV V F + ++VS S D TIKVWS D L+
Sbjct: 332 PRDITIRRVLVGHRAAVNVVDFDDR---YIVSASGDRTIKVWSMD----------TLEFV 378
Query: 488 AVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPV 547
+A H + I L LV +GS D T +W + V + GH+ + + F
Sbjct: 379 RTLAGHRRGIACLQY--RGRLVVSGSSDNTIRLWDIHSGVCLRVLEGHEELVRCIRFD-- 434
Query: 548 DQVVITASGDKTIKIW---------SISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGA 598
++ +++ + D IK+W ++S CL + HT V R F QIVS
Sbjct: 435 EKRIVSGAYDGKIKVWDLQAALDPRALSSEICLCSLVQHTGRVFRLQF--DDFQIVSSSH 492
Query: 599 DGLVKLW 605
D + +W
Sbjct: 493 DDTILIW 499
Score = 212 (79.7 bits), Expect = 1.2e-13, P = 1.2e-13
Identities = 55/204 (26%), Positives = 99/204 (48%)
Query: 29 SDGSFIACACGESINIVDL---SNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIR 85
++G + C+ SI + D+ + +I+ + G + + DD+ + S+ R I+
Sbjct: 311 ANGIMVTCSKDRSIAVWDMVSPRDITIRRVLVGHRAAVNVVDF--DDRYIVSASGDRTIK 368
Query: 86 VWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGA-DRKVLVWDVDGGFCTHYFKGHK 144
VW + TL+ +R+ GH G+AC G L +G+ D + +WD+ G C +GH+
Sbjct: 369 VWSMDTLEFVRTLAGHRR---GIACLQYRGRLVVSGSSDNTIRLWDIHSGVCLRVLEGHE 425
Query: 145 GVVSSILFHPDTDKSLLFSGSDDATVRVWDLLA---------KKCVATLDKHFSRVTSMA 195
+V I F D+ + SG+ D ++VWDL A + C+ +L +H RV +
Sbjct: 426 ELVRCIRF----DEKRIVSGAYDGKIKVWDLQAALDPRALSSEICLCSLVQHTGRVFRLQ 481
Query: 196 ITSDGSTLISAGRDKVVNLWDLRD 219
D ++S+ D + +WD D
Sbjct: 482 F--DDFQIVSSSHDDTILIWDFLD 503
Score = 183 (69.5 bits), Expect = 1.7e-10, P = 1.7e-10
Identities = 73/330 (22%), Positives = 134/330 (40%)
Query: 30 DGSFIACACGESINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWDL 89
D ++ +I I D + S + G + ++ L L D++++ S +RVWD+
Sbjct: 232 DDKIVSGLRDNTIKIWDRKDYSCSRILSGHTGSV--LCLQYDNRVIISGSSDATVRVWDV 289
Query: 90 STLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWD-VDGGFCT--HYFKGHKGV 146
T +C+++ H + + + G++ T DR + VWD V T GH+
Sbjct: 290 ETGECIKTLIHHCEAVLHLRF--ANGIMVTCSKDRSIAVWDMVSPRDITIRRVLVGHRAA 347
Query: 147 VSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISA 206
V+ + D D + S S D T++VW + + V TL H + + G ++S
Sbjct: 348 VNVV----DFDDRYIVSASGDRTIKVWSMDTLEFVRTLAGHRRGIACLQYR--GRLVVSG 401
Query: 207 GRDKVVNLWDLRDYSCKLTVPTYE-MVEAVC----AIPPGSAFDSFLSSYN-QQTIKKKR 260
D + LWD+ C + +E +V + I G A+D + ++ Q + +
Sbjct: 402 SSDNTIRLWDIHSGVCLRVLEGHEELVRCIRFDEKRIVSG-AYDGKIKVWDLQAALDPRA 460
Query: 261 RSLEIHFIT-VGERGIVRMWNADSACLYEQKSSDVTISFE-MDDSKRGFTAAT---VLPS 315
S EI + V G V D + D + ++ +D G ++T LP
Sbjct: 461 LSSEICLCSLVQHTGRVFRLQFDDFQIVSSSHDDTILIWDFLDAPPSGLPSSTNRATLPE 520
Query: 316 NQGLLCVTADQQLL-LYTTVEVPEKKMELI 344
V Q L + E+ + E++
Sbjct: 521 LPNQAAVARAQMLFEMAARREIERRDREVV 550
Score = 136 (52.9 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 69/294 (23%), Positives = 131/294 (44%)
Query: 199 DGSTLISAGRDKVVNLWDLRDYSCKLTVPTYEMVEAVC------AIPPGSAFDSFLSSYN 252
D ++S RD + +WD +DYSC + + +C I GS+ D+ + ++
Sbjct: 231 DDDKIVSGLRDNTIKIWDRKDYSCSRILSGHTG-SVLCLQYDNRVIISGSS-DATVRVWD 288
Query: 253 QQTIKKKRRSLEIHFITVGERGIVRMWNADSACLYEQKSSDVTISFEMDDSKRGFTAATV 312
+T + ++L IH ++ + A+ + K + + ++M S R T V
Sbjct: 289 VET-GECIKTL-IHHC----EAVLHLRFANGIMVTCSKDRSIAV-WDMV-SPRDITIRRV 340
Query: 313 LPSNQGLL-CVTADQQLLLYTTVEVPEK--KMELI-LSKRLVGYNEEILDLKFLGEEEQY 368
L ++ + V D + ++ + + K M+ + + L G+ I L++ G
Sbjct: 341 LVGHRAAVNVVDFDDRYIVSASGDRTIKVWSMDTLEFVRTLAGHRRGIACLQYRGR---- 396
Query: 369 LAVATNIEQ-VQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWD 427
L V+ + + ++++D+ S C VL GH E+V C+ +I V+G+ D +++WD
Sbjct: 397 LVVSGSSDNTIRLWDIHSGVCLRVLEGHEELVRCI---RFDEKRI--VSGAYDGKIKVWD 451
Query: 428 SE---------SRCCVGVGTGHMGAVGAVAFSKKLQNF-LVSGSSDHTIKVWSF 471
+ S C+ H G V F + +F +VS S D TI +W F
Sbjct: 452 LQAALDPRALSSEICLCSLVQHTGRV----FRLQFDDFQIVSSSHDDTILIWDF 501
Score = 135 (52.6 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 66/287 (22%), Positives = 126/287 (43%)
Query: 155 DTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNL 214
D DK + SG D T+++WD C L H V + + D +IS D V +
Sbjct: 231 DDDK--IVSGLRDNTIKIWDRKDYSCSRILSGHTGSV--LCLQYDNRVIISGSSDATVRV 286
Query: 215 WDLRDYSCKLTVPTYEMVEAVCAIPPGSAFDSFLSSYNQQTI--KKKRRSLEIHFITVGE 272
WD+ C T+ + EAV + + S + R + I + VG
Sbjct: 287 WDVETGECIKTLIHH--CEAVLHLRFANGIMVTCSKDRSIAVWDMVSPRDITIRRVLVGH 344
Query: 273 RGIVRMWNADSACLYEQKSSDVTIS-FEMDDSKRGFTAATVLPSNQGLLCVTADQQLLLY 331
R V + + D + S D TI + MD + F T+ +G+ C+ +L++
Sbjct: 345 RAAVNVVDFDDRYIVSA-SGDRTIKVWSMDTLE--FVR-TLAGHRRGIACLQYRGRLVVS 400
Query: 332 TTVEVPEKKMEL---ILSKRLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSC 388
+ + + ++ + + L G+ E + ++F +E++ ++ A + +++V+DL +
Sbjct: 401 GSSDNTIRLWDIHSGVCLRVLEGHEELVRCIRF--DEKRIVSGAYD-GKIKVWDLQAALD 457
Query: 389 SYVLAGHSEIVLCLDTCALSSGKIL--------IVTGSKDNSVRLWD 427
L+ SEI LC + +G++ IV+ S D+++ +WD
Sbjct: 458 PRALS--SEICLC--SLVQHTGRVFRLQFDDFQIVSSSHDDTILIWD 500
Score = 134 (52.2 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 64/282 (22%), Positives = 128/282 (45%)
Query: 304 KRGFTAATVLPSNQG-LLCVTADQQLLLY----TTVEVPEKKM-ELILSKRLVGYNEEIL 357
++ ++ + +L + G +LC+ D ++++ TV V + + E I K L+ + E +L
Sbjct: 249 RKDYSCSRILSGHTGSVLCLQYDNRVIISGSSDATVRVWDVETGECI--KTLIHHCEAVL 306
Query: 358 DLKFLGEEEQYLAVATNIEQVQVYDLSS---MSCSYVLAGHSEIVLCLDTCALSSGKILI 414
L+F + + + V+D+ S ++ VL GH V +D I
Sbjct: 307 HLRFANG---IMVTCSKDRSIAVWDMVSPRDITIRRVLVGHRAAVNVVDF-----DDRYI 358
Query: 415 VTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGL 474
V+ S D ++++W ++ V GH + + + +L +VSGSSD+TI++W
Sbjct: 359 VSASGDRTIKVWSMDTLEFVRTLAGHRRGIACLQYRGRL---VVSGSSDNTIRLW----- 410
Query: 475 SDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRL-----PDLVS- 528
D + L+ V+ H + + + ++ + +G+ D VW L P +S
Sbjct: 411 --DIHSGVCLR---VLEGHEELVRCIRF--DEKRIVSGAYDGKIKVWDLQAALDPRALSS 463
Query: 529 ---VVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISD 567
+ + H ++ ++F D ++++S D TI IW D
Sbjct: 464 EICLCSLVQHTGRVFRLQFD--DFQIVSSSHDDTILIWDFLD 503
Score = 40 (19.1 bits), Expect = 3.3e-21, Sum P(2) = 3.3e-21
Identities = 5/13 (38%), Positives = 10/13 (76%)
Query: 139 YFKGHKGVVSSIL 151
Y +GH+G++ +L
Sbjct: 33 YLQGHEGLIEEVL 45
>UNIPROTKB|Q09990 [details] [associations]
symbol:lin-23 "F-box/WD repeat-containing protein lin-23"
species:6239 "Caenorhabditis elegans" [GO:0005737 "cytoplasm"
evidence=NAS] [GO:0008285 "negative regulation of cell
proliferation" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
GO:GO:0005634 GO:GO:0008340 GO:GO:0009792 GO:GO:0006898
GO:GO:0005737 GO:GO:0040007 GO:GO:0040010 GO:GO:0008285
GO:GO:0051301 GO:GO:0002119 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0010171 GO:GO:0040011
GO:GO:0048812 SUPFAM:SSF81383 GO:GO:0007049 GO:GO:0040035
GO:GO:0040015 EMBL:FO080748 HOGENOM:HOG000006638 KO:K03362
GeneTree:ENSGT00690000101849 EMBL:AF275253 PIR:T16607
RefSeq:NP_495285.1 UniGene:Cel.17632 ProteinModelPortal:Q09990
SMR:Q09990 STRING:Q09990 PaxDb:Q09990 EnsemblMetazoa:K10B2.1
GeneID:174058 KEGG:cel:CELE_K10B2.1 UCSC:K10B2.1 CTD:174058
WormBase:K10B2.1 InParanoid:Q09990 OMA:IKVWSMD NextBio:882327
Uniprot:Q09990
Length = 665
Score = 287 (106.1 bits), Expect = 3.3e-21, Sum P(2) = 3.3e-21
Identities = 70/240 (29%), Positives = 127/240 (52%)
Query: 414 IVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDG 473
IV+G +DN++++WD + C + +GH G+V + + ++ ++SGSSD T++VW
Sbjct: 235 IVSGLRDNTIKIWDRKDYSCSRILSGHTGSVLCLQYDNRV---IISGSSDATVRVW---- 287
Query: 474 LSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSV--VT 531
D E +K + H + + L A + ++ T S+DR+ VW D+VS +T
Sbjct: 288 ---DVETGECIKT---LIHHCEAVLHLRFA--NGIMVTCSKDRSIAVW---DMVSPRDIT 336
Query: 532 FR----GHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFL 587
R GH+ + V+F D+ +++ASGD+TIK+WS+ ++T GH + A
Sbjct: 337 IRRVLVGHRAAVNVVDFD--DRYIVSASGDRTIKVWSMDTLEFVRTLAGHRRGI--ACLQ 392
Query: 588 TRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLW 647
RG +VS +D ++LW + +G C+ + HE+ + + +K +G D + +W
Sbjct: 393 YRGRLVVSGSSDNTIRLWDIHSGVCLRVLEGHEELVRCIRFDEKR--IVSGAYDGKIKVW 450
Score = 251 (93.4 bits), Expect = 3.5e-17, Sum P(2) = 3.5e-17
Identities = 63/196 (32%), Positives = 102/196 (52%)
Query: 413 LIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFD 472
+I++GS D +VR+WD E+ C+ H AV + F+ + +V+ S D +I VW
Sbjct: 274 VIISGSSDATVRVWDVETGECIKTLIHHCEAVLHLRFANGI---MVTCSKDRSIAVW--- 327
Query: 473 GLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTF 532
D P ++ + V+ H +N V +D + + S DRT VW + L V T
Sbjct: 328 ----DMVSPRDITIRRVLVGHRAAVN--VVDFDDRYIVSASGDRTIKVWSMDTLEFVRTL 381
Query: 533 RGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQ 592
GH+RGI +++ ++V++ S D TI++W I G CL+ EGH V F + +
Sbjct: 382 AGHRRGIACLQYR--GRLVVSGSSDNTIRLWDIHSGVCLRVLEGHEELVRCIRFDEK--R 437
Query: 593 IVSCGADGLVKLWTVR 608
IVS DG +K+W ++
Sbjct: 438 IVSGAYDGKIKVWDLQ 453
Score = 227 (85.0 bits), Expect = 1.6e-14, Sum P(2) = 1.6e-14
Identities = 81/307 (26%), Positives = 141/307 (45%)
Query: 315 SNQGLLCVTADQQLLLY----TTVEVPEKKMELILSKRLVGYNEEILDLKFLGEEEQYLA 370
+++G+ C+ D ++ T+++ ++K + S+ L G+ +L L++ + + +
Sbjct: 221 NSKGVYCLQYDDDKIVSGLRDNTIKIWDRK-DYSCSRILSGHTGSVLCLQY---DNRVII 276
Query: 371 VATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSES 430
++ V+V+D+ + C L H E VL L ++G ++VT SKD S+ +WD S
Sbjct: 277 SGSSDATVRVWDVETGECIKTLIHHCEAVLHL---RFANG--IMVTCSKDRSIAVWDMVS 331
Query: 431 RCCVGVG---TGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAK 487
+ + GH AV V F + ++VS S D TIKVWS D L+
Sbjct: 332 PRDITIRRVLVGHRAAVNVVDFDDR---YIVSASGDRTIKVWSMD----------TLEFV 378
Query: 488 AVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPV 547
+A H + I L LV +GS D T +W + V + GH+ + + F
Sbjct: 379 RTLAGHRRGIACLQY--RGRLVVSGSSDNTIRLWDIHSGVCLRVLEGHEELVRCIRFD-- 434
Query: 548 DQVVITASGDKTIKIW---------SISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGA 598
++ +++ + D IK+W ++S CL + HT V R F QIVS
Sbjct: 435 EKRIVSGAYDGKIKVWDLQAALDPRALSSEICLCSLVQHTGRVFRLQF--DDFQIVSSSH 492
Query: 599 DGLVKLW 605
D + +W
Sbjct: 493 DDTILIW 499
Score = 212 (79.7 bits), Expect = 1.2e-13, P = 1.2e-13
Identities = 55/204 (26%), Positives = 99/204 (48%)
Query: 29 SDGSFIACACGESINIVDL---SNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIR 85
++G + C+ SI + D+ + +I+ + G + + DD+ + S+ R I+
Sbjct: 311 ANGIMVTCSKDRSIAVWDMVSPRDITIRRVLVGHRAAVNVVDF--DDRYIVSASGDRTIK 368
Query: 86 VWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGA-DRKVLVWDVDGGFCTHYFKGHK 144
VW + TL+ +R+ GH G+AC G L +G+ D + +WD+ G C +GH+
Sbjct: 369 VWSMDTLEFVRTLAGHRR---GIACLQYRGRLVVSGSSDNTIRLWDIHSGVCLRVLEGHE 425
Query: 145 GVVSSILFHPDTDKSLLFSGSDDATVRVWDLLA---------KKCVATLDKHFSRVTSMA 195
+V I F D+ + SG+ D ++VWDL A + C+ +L +H RV +
Sbjct: 426 ELVRCIRF----DEKRIVSGAYDGKIKVWDLQAALDPRALSSEICLCSLVQHTGRVFRLQ 481
Query: 196 ITSDGSTLISAGRDKVVNLWDLRD 219
D ++S+ D + +WD D
Sbjct: 482 F--DDFQIVSSSHDDTILIWDFLD 503
Score = 183 (69.5 bits), Expect = 1.7e-10, P = 1.7e-10
Identities = 73/330 (22%), Positives = 134/330 (40%)
Query: 30 DGSFIACACGESINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWDL 89
D ++ +I I D + S + G + ++ L L D++++ S +RVWD+
Sbjct: 232 DDKIVSGLRDNTIKIWDRKDYSCSRILSGHTGSV--LCLQYDNRVIISGSSDATVRVWDV 289
Query: 90 STLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWD-VDGGFCT--HYFKGHKGV 146
T +C+++ H + + + G++ T DR + VWD V T GH+
Sbjct: 290 ETGECIKTLIHHCEAVLHLRF--ANGIMVTCSKDRSIAVWDMVSPRDITIRRVLVGHRAA 347
Query: 147 VSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISA 206
V+ + D D + S S D T++VW + + V TL H + + G ++S
Sbjct: 348 VNVV----DFDDRYIVSASGDRTIKVWSMDTLEFVRTLAGHRRGIACLQYR--GRLVVSG 401
Query: 207 GRDKVVNLWDLRDYSCKLTVPTYE-MVEAVC----AIPPGSAFDSFLSSYN-QQTIKKKR 260
D + LWD+ C + +E +V + I G A+D + ++ Q + +
Sbjct: 402 SSDNTIRLWDIHSGVCLRVLEGHEELVRCIRFDEKRIVSG-AYDGKIKVWDLQAALDPRA 460
Query: 261 RSLEIHFIT-VGERGIVRMWNADSACLYEQKSSDVTISFE-MDDSKRGFTAAT---VLPS 315
S EI + V G V D + D + ++ +D G ++T LP
Sbjct: 461 LSSEICLCSLVQHTGRVFRLQFDDFQIVSSSHDDTILIWDFLDAPPSGLPSSTNRATLPE 520
Query: 316 NQGLLCVTADQQLL-LYTTVEVPEKKMELI 344
V Q L + E+ + E++
Sbjct: 521 LPNQAAVARAQMLFEMAARREIERRDREVV 550
Score = 136 (52.9 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 69/294 (23%), Positives = 131/294 (44%)
Query: 199 DGSTLISAGRDKVVNLWDLRDYSCKLTVPTYEMVEAVC------AIPPGSAFDSFLSSYN 252
D ++S RD + +WD +DYSC + + +C I GS+ D+ + ++
Sbjct: 231 DDDKIVSGLRDNTIKIWDRKDYSCSRILSGHTG-SVLCLQYDNRVIISGSS-DATVRVWD 288
Query: 253 QQTIKKKRRSLEIHFITVGERGIVRMWNADSACLYEQKSSDVTISFEMDDSKRGFTAATV 312
+T + ++L IH ++ + A+ + K + + ++M S R T V
Sbjct: 289 VET-GECIKTL-IHHC----EAVLHLRFANGIMVTCSKDRSIAV-WDMV-SPRDITIRRV 340
Query: 313 LPSNQGLL-CVTADQQLLLYTTVEVPEK--KMELI-LSKRLVGYNEEILDLKFLGEEEQY 368
L ++ + V D + ++ + + K M+ + + L G+ I L++ G
Sbjct: 341 LVGHRAAVNVVDFDDRYIVSASGDRTIKVWSMDTLEFVRTLAGHRRGIACLQYRGR---- 396
Query: 369 LAVATNIEQ-VQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWD 427
L V+ + + ++++D+ S C VL GH E+V C+ +I V+G+ D +++WD
Sbjct: 397 LVVSGSSDNTIRLWDIHSGVCLRVLEGHEELVRCI---RFDEKRI--VSGAYDGKIKVWD 451
Query: 428 SE---------SRCCVGVGTGHMGAVGAVAFSKKLQNF-LVSGSSDHTIKVWSF 471
+ S C+ H G V F + +F +VS S D TI +W F
Sbjct: 452 LQAALDPRALSSEICLCSLVQHTGRV----FRLQFDDFQIVSSSHDDTILIWDF 501
Score = 135 (52.6 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 66/287 (22%), Positives = 126/287 (43%)
Query: 155 DTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNL 214
D DK + SG D T+++WD C L H V + + D +IS D V +
Sbjct: 231 DDDK--IVSGLRDNTIKIWDRKDYSCSRILSGHTGSV--LCLQYDNRVIISGSSDATVRV 286
Query: 215 WDLRDYSCKLTVPTYEMVEAVCAIPPGSAFDSFLSSYNQQTI--KKKRRSLEIHFITVGE 272
WD+ C T+ + EAV + + S + R + I + VG
Sbjct: 287 WDVETGECIKTLIHH--CEAVLHLRFANGIMVTCSKDRSIAVWDMVSPRDITIRRVLVGH 344
Query: 273 RGIVRMWNADSACLYEQKSSDVTIS-FEMDDSKRGFTAATVLPSNQGLLCVTADQQLLLY 331
R V + + D + S D TI + MD + F T+ +G+ C+ +L++
Sbjct: 345 RAAVNVVDFDDRYIVSA-SGDRTIKVWSMDTLE--FVR-TLAGHRRGIACLQYRGRLVVS 400
Query: 332 TTVEVPEKKMEL---ILSKRLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSC 388
+ + + ++ + + L G+ E + ++F +E++ ++ A + +++V+DL +
Sbjct: 401 GSSDNTIRLWDIHSGVCLRVLEGHEELVRCIRF--DEKRIVSGAYD-GKIKVWDLQAALD 457
Query: 389 SYVLAGHSEIVLCLDTCALSSGKIL--------IVTGSKDNSVRLWD 427
L+ SEI LC + +G++ IV+ S D+++ +WD
Sbjct: 458 PRALS--SEICLC--SLVQHTGRVFRLQFDDFQIVSSSHDDTILIWD 500
Score = 134 (52.2 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 64/282 (22%), Positives = 128/282 (45%)
Query: 304 KRGFTAATVLPSNQG-LLCVTADQQLLLY----TTVEVPEKKM-ELILSKRLVGYNEEIL 357
++ ++ + +L + G +LC+ D ++++ TV V + + E I K L+ + E +L
Sbjct: 249 RKDYSCSRILSGHTGSVLCLQYDNRVIISGSSDATVRVWDVETGECI--KTLIHHCEAVL 306
Query: 358 DLKFLGEEEQYLAVATNIEQVQVYDLSS---MSCSYVLAGHSEIVLCLDTCALSSGKILI 414
L+F + + + V+D+ S ++ VL GH V +D I
Sbjct: 307 HLRFANG---IMVTCSKDRSIAVWDMVSPRDITIRRVLVGHRAAVNVVDF-----DDRYI 358
Query: 415 VTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGL 474
V+ S D ++++W ++ V GH + + + +L +VSGSSD+TI++W
Sbjct: 359 VSASGDRTIKVWSMDTLEFVRTLAGHRRGIACLQYRGRL---VVSGSSDNTIRLW----- 410
Query: 475 SDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRL-----PDLVS- 528
D + L+ V+ H + + + ++ + +G+ D VW L P +S
Sbjct: 411 --DIHSGVCLR---VLEGHEELVRCIRF--DEKRIVSGAYDGKIKVWDLQAALDPRALSS 463
Query: 529 ---VVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISD 567
+ + H ++ ++F D ++++S D TI IW D
Sbjct: 464 EICLCSLVQHTGRVFRLQFD--DFQIVSSSHDDTILIWDFLD 503
Score = 40 (19.1 bits), Expect = 3.3e-21, Sum P(2) = 3.3e-21
Identities = 5/13 (38%), Positives = 10/13 (76%)
Query: 139 YFKGHKGVVSSIL 151
Y +GH+G++ +L
Sbjct: 33 YLQGHEGLIEEVL 45
>UNIPROTKB|O75529 [details] [associations]
symbol:TAF5L "TAF5-like RNA polymerase II
p300/CBP-associated factor-associated factor 65 kDa subunit 5L"
species:9606 "Homo sapiens" [GO:0004402 "histone acetyltransferase
activity" evidence=IDA] [GO:0003713 "transcription coactivator
activity" evidence=IDA] [GO:0033276 "transcription factor TFTC
complex" evidence=IDA] [GO:0030914 "STAGA complex" evidence=IDA]
[GO:0043966 "histone H3 acetylation" evidence=IDA] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=TAS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=TAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 EMBL:AJ009770
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003700 EMBL:AL121990 EMBL:CH471098 GO:GO:0003713
GO:GO:0006366 GO:GO:0043966 GO:GO:0030914 GO:GO:0033276
EMBL:AF069736 EMBL:BC041094 IPI:IPI00004325 IPI:IPI00410088
RefSeq:NP_001020418.1 RefSeq:NP_055224.1 UniGene:Hs.270621
ProteinModelPortal:O75529 SMR:O75529 DIP:DIP-28147N IntAct:O75529
STRING:O75529 PhosphoSite:O75529 PaxDb:O75529 PRIDE:O75529
DNASU:27097 Ensembl:ENST00000258281 Ensembl:ENST00000366675
Ensembl:ENST00000366676 GeneID:27097 KEGG:hsa:27097 UCSC:uc001htq.3
UCSC:uc001htr.3 CTD:27097 GeneCards:GC01M229728 HGNC:HGNC:17304
neXtProt:NX_O75529 PharmGKB:PA38223 HOGENOM:HOG000212423
HOVERGEN:HBG050226 InParanoid:O75529 KO:K03130 OMA:YVDSEGP
OrthoDB:EOG4NCMCF PhylomeDB:O75529 ChiTaRS:TAF5L GenomeRNAi:27097
NextBio:49741 ArrayExpress:O75529 Bgee:O75529 CleanEx:HS_TAF5L
Genevestigator:O75529 GermOnline:ENSG00000135801 Uniprot:O75529
Length = 589
Score = 268 (99.4 bits), Expect = 3.3e-21, Sum P(2) = 3.3e-21
Identities = 69/246 (28%), Positives = 114/246 (46%)
Query: 391 VLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFS 450
+L GH V A SSG +++ S+D S+R WD S + GH V + S
Sbjct: 337 ILRGHCGPVYSTRFLADSSG---LLSCSEDMSIRYWDLGSFTNTVLYQGHAYPVWDLDIS 393
Query: 451 KKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVC 510
+ SGS D T ++WSFD P+ + A H D++ + PN + +
Sbjct: 394 P-YSLYFASGSHDRTARLWSFD-----RTYPLR-----IYAGHLADVDCVKFHPNSNYLA 442
Query: 511 TGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSC 570
TGS D+T +W SV F GH+ + S+ FSP + + +A D+ +K+W ++ G+
Sbjct: 443 TGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGTL 502
Query: 571 LKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGK 630
K GHT ++ +F I S D V++W +R C A D ++ + G+
Sbjct: 503 YKELRGHTDNITSLTFSPDSGLIASASMDNSVRVWDIRNTYCSAPADGSSSELVGVYTGQ 562
Query: 631 KTEMFA 636
+ + +
Sbjct: 563 MSNVLS 568
Score = 241 (89.9 bits), Expect = 6.1e-17, P = 6.1e-17
Identities = 59/196 (30%), Positives = 91/196 (46%)
Query: 29 SDGS-FIACACGESINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSG-HSREIRV 86
+D S ++C+ SI DL + + +G + + L +SP L F+SG H R R+
Sbjct: 352 ADSSGLLSCSEDMSIRYWDLGSFTNTVLYQGHAYPVWDLDISPYS-LYFASGSHDRTARL 410
Query: 87 WDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGV 146
W LR + GH + HP+ LAT D+ V +W G F GH+G
Sbjct: 411 WSFDRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQQGNSVRLFTGHRGP 470
Query: 147 VSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISA 206
V S+ F P+ L S +D +++WDL + L H +TS+ + D + SA
Sbjct: 471 VLSLAFSPNG--KYLASAGEDQRLKLWDLASGTLYKELRGHTDNITSLTFSPDSGLIASA 528
Query: 207 GRDKVVNLWDLRDYSC 222
D V +WD+R+ C
Sbjct: 529 SMDNSVRVWDIRNTYC 544
Score = 237 (88.5 bits), Expect = 1.0e-17, Sum P(2) = 1.0e-17
Identities = 61/236 (25%), Positives = 115/236 (48%)
Query: 347 KRLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCA 406
K L G+ + +FL + L+ + ++ ++ +DL S + + + GH+ V LD
Sbjct: 336 KILRGHCGPVYSTRFLADSSGLLSCSEDMS-IRYWDLGSFTNTVLYQGHAYPVWDLD--- 391
Query: 407 LSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTI 466
+S + +GS D + RLW + + + GH+ V V F N+L +GS+D T+
Sbjct: 392 ISPYSLYFASGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPN-SNYLATGSTDKTV 450
Query: 467 KVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDL 526
++WS A+Q +++ + H + SLA +PN + + +D+ +W L
Sbjct: 451 RLWS-------AQQGNSVR---LFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASG 500
Query: 527 VSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVL 582
RGH I S+ FSP ++ +AS D ++++W I + C +G +S ++
Sbjct: 501 TLYKELRGHTDNITSLTFSPDSGLIASASMDNSVRVWDIRNTYCSAPADGSSSELV 556
Score = 230 (86.0 bits), Expect = 6.1e-17, Sum P(2) = 6.1e-17
Identities = 56/209 (26%), Positives = 89/209 (42%)
Query: 439 GHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDIN 498
GH G V + F L+S S D +I+ W ++ + H +
Sbjct: 340 GHCGPVYSTRFLADSSG-LLSCSEDMSIRYWDLGSFTNTV----------LYQGHAYPVW 388
Query: 499 SLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDK 558
L ++P +GS DRTA +W + + GH + V+F P + T S DK
Sbjct: 389 DLDISPYSLYFASGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDK 448
Query: 559 TIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDK 618
T+++WS G+ ++ F GH VL +F G + S G D +KLW + +G
Sbjct: 449 TVRLWSAQQGNSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGTLYKELRG 508
Query: 619 HEDKIWALAVGKKTEMFATGGSDALVNLW 647
H D I +L + + A+ D V +W
Sbjct: 509 HTDNITSLTFSPDSGLIASASMDNSVRVW 537
Score = 197 (74.4 bits), Expect = 4.0e-12, P = 4.0e-12
Identities = 54/185 (29%), Positives = 78/185 (42%)
Query: 34 IACACGESINIVDLSNASIKSTI-EGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTL 92
+AC E + D NA + I G + + D L S IR WDL +
Sbjct: 316 LACDILEEEDDED-DNAGTEMKILRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDLGSF 374
Query: 93 KCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILF 152
++GH P + P A+ DR +W D + + GH V + F
Sbjct: 375 TNTVLYQGHAYPVWDLDISPYSLYFASGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKF 434
Query: 153 HPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVV 212
HP+++ L +GS D TVR+W V H V S+A + +G L SAG D+ +
Sbjct: 435 HPNSN--YLATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRL 492
Query: 213 NLWDL 217
LWDL
Sbjct: 493 KLWDL 497
Score = 195 (73.7 bits), Expect = 6.6e-12, P = 6.6e-12
Identities = 42/143 (29%), Positives = 72/143 (50%)
Query: 63 ITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGA 122
+ + P+ L + + +R+W +R + GH GP + +A P+G LA+AG
Sbjct: 429 VDCVKFHPNSNYLATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLAFSPNGKYLASAGE 488
Query: 123 DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVA 182
D+++ +WD+ G +GH ++S+ F PD+ L+ S S D +VRVWD+ C A
Sbjct: 489 DQRLKLWDLASGTLYKELRGHTDNITSLTFSPDS--GLIASASMDNSVRVWDIRNTYCSA 546
Query: 183 TLDKHFSRVTSMAITSDGSTLIS 205
D S + + T S ++S
Sbjct: 547 PADGSSSELVGV-YTGQMSNVLS 568
Score = 181 (68.8 bits), Expect = 1.5e-11, Sum P(2) = 1.5e-11
Identities = 39/172 (22%), Positives = 74/172 (43%)
Query: 476 DDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGH 535
DD + + K ++ H + S + S + + S+D + W L + V ++GH
Sbjct: 325 DDEDDNAGTEMK-ILRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDLGSFTNTVLYQGH 383
Query: 536 KRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVS 595
+W ++ SP + S D+T ++WS L+ + GH + V F + +
Sbjct: 384 AYPVWDLDISPYSLYFASGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLAT 443
Query: 596 CGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLW 647
D V+LW+ + G + + H + +LA + A+ G D + LW
Sbjct: 444 GSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLW 495
Score = 140 (54.3 bits), Expect = 6.5e-06, P = 6.5e-06
Identities = 30/104 (28%), Positives = 53/104 (50%)
Query: 37 ACGESINIVDLSNASIKSTIE---GGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLK 93
A G + V L +A +++ G + +LA SP+ K L S+G + +++WDL++
Sbjct: 442 ATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGT 501
Query: 94 CLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCT 137
+ +GH + P GL+A+A D V VWD+ +C+
Sbjct: 502 LYKELRGHTDNITSLTFSPDSGLIASASMDNSVRVWDIRNTYCS 545
Score = 117 (46.2 bits), Expect = 1.9e-09, Sum P(2) = 1.9e-09
Identities = 41/116 (35%), Positives = 60/116 (51%)
Query: 346 SKRL-VGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDT 404
S RL G+ +L L F +YLA A ++++++DL+S + L GH++ + L T
Sbjct: 460 SVRLFTGHRGPVLSLAF-SPNGKYLASAGEDQRLKLWDLASGTLYKELRGHTDNITSL-T 517
Query: 405 CALSSGKILIVTGSKDNSVRLWDSESRCC-----------VGVGTGHMGAVGAVAF 449
+ SG LI + S DNSVR+WD + C VGV TG M V +V F
Sbjct: 518 FSPDSG--LIASASMDNSVRVWDIRNTYCSAPADGSSSELVGVYTGQMSNVLSVQF 571
Score = 105 (42.0 bits), Expect = 1.9e-09, Sum P(2) = 1.9e-09
Identities = 54/212 (25%), Positives = 86/212 (40%)
Query: 68 LSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGH--DGPAIGMACHPSGGLLATAGADRK 125
+SPD KLL + + I++W L + K L+S + H D I +AC +L +
Sbjct: 276 ISPDSKLLAAGFDNSCIKLWSLRSKK-LKS-EPHQVDVSRIHLACD----ILEEEDDE-- 327
Query: 126 VLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLD 185
D + G +GH G V S F D+ S L S S+D ++R WDL +
Sbjct: 328 ----DDNAGTEMKILRGHCGPVYSTRFLADS--SGLLSCSEDMSIRYWDLGSFTNTVLYQ 381
Query: 186 KHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYEMVEAVCA-IPPGSAF 244
H V + I+ S D+ LW D + L + + + C P S +
Sbjct: 382 GHAYPVWDLDISPYSLYFASGSHDRTARLWSF-DRTYPLRIYAGHLADVDCVKFHPNSNY 440
Query: 245 DSFLSSYNQQTIKKKRRSLEIHFITVGERGIV 276
+ S+ + ++ + T G RG V
Sbjct: 441 LATGSTDKTVRLWSAQQGNSVRLFT-GHRGPV 471
Score = 58 (25.5 bits), Expect = 3.3e-21, Sum P(2) = 3.3e-21
Identities = 12/44 (27%), Positives = 26/44 (59%)
Query: 136 CTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKK 179
C + F + ++++ PD+ LL +G D++ +++W L +KK
Sbjct: 260 CFYAFYNTEQLLNTAEISPDS--KLLAAGFDNSCIKLWSLRSKK 301
Score = 45 (20.9 bits), Expect = 1.4e-15, Sum P(2) = 1.4e-15
Identities = 10/44 (22%), Positives = 20/44 (45%)
Query: 388 CSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESR 431
C Y ++ L+T +S L+ G ++ ++LW S+
Sbjct: 260 CFYAFYNTEQL---LNTAEISPDSKLLAAGFDNSCIKLWSLRSK 300
Score = 38 (18.4 bits), Expect = 1.8e-09, Sum P(2) = 1.8e-09
Identities = 7/17 (41%), Positives = 11/17 (64%)
Query: 452 KLQNFLVSGSSDHTIKV 468
+L+NFL S H+ +V
Sbjct: 76 RLRNFLTDSDSQHSHEV 92
>CGD|CAL0000165 [details] [associations]
symbol:orf19.536 species:5476 "Candida albicans" [GO:0000124
"SAGA complex" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0046695 "SLIK (SAGA-like) complex" evidence=IEA] [GO:0005669
"transcription factor TFIID complex" evidence=IEA] [GO:0032947
"protein complex scaffold" evidence=IEA] [GO:0043130 "ubiquitin
binding" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0016573 "histone acetylation" evidence=IEA]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 CGD:CAL0000165
GO:GO:0005634 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013720 Pfam:PF08513
EMBL:AACQ01000055 EMBL:AACQ01000054 KO:K03130 HOGENOM:HOG000212424
RefSeq:XP_717399.1 RefSeq:XP_717491.1 ProteinModelPortal:Q5A6L8
STRING:Q5A6L8 GeneID:3640929 GeneID:3640987 KEGG:cal:CaO19.536
KEGG:cal:CaO19.8169 Uniprot:Q5A6L8
Length = 798
Score = 274 (101.5 bits), Expect = 3.4e-21, Sum P(2) = 3.4e-21
Identities = 54/197 (27%), Positives = 99/197 (50%)
Query: 457 LVSGSSDHTIKVWSFDG------LSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVC 510
+ +G D IK+WS DG L D +P K + H + ++ +P++ +
Sbjct: 476 VAAGFQDSYIKLWSLDGKPLKSVLKRDRHKPQENTRKLI--GHSGPVYGVSFSPDNKYLL 533
Query: 511 TGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSC 570
+ S+D+T +W L ++V+++GH + +W V+FSP+ +TAS D+T ++W+
Sbjct: 534 SCSEDKTVRLWSLDTYTALVSYKGHTQPVWDVKFSPLGHYFVTASHDQTARLWATDHIYP 593
Query: 571 LKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGK 630
L+ F GH + V F + + +D ++W V TG C+ + H + + LAV
Sbjct: 594 LRIFAGHINDVDCVEFHPNSNYVFTGSSDKTCRMWDVHTGNCVRVFLGHTNSVNCLAVSP 653
Query: 631 KTEMFATGGSDALVNLW 647
A+GG D ++ +W
Sbjct: 654 DGRWLASGGEDGIICVW 670
Score = 263 (97.6 bits), Expect = 4.4e-19, P = 4.4e-19
Identities = 53/160 (33%), Positives = 81/160 (50%)
Query: 58 GGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPSGGLL 117
G S + ++ SPD+K L S + +R+W L T L S+KGH P + P G
Sbjct: 515 GHSGPVYGVSFSPDNKYLLSCSEDKTVRLWSLDTYTALVSYKGHTQPVWDVKFSPLGHYF 574
Query: 118 ATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLA 177
TA D+ +W D + F GH V + FHP+++ +F+GS D T R+WD+
Sbjct: 575 VTASHDQTARLWATDHIYPLRIFAGHINDVDCVEFHPNSN--YVFTGSSDKTCRMWDVHT 632
Query: 178 KKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDL 217
CV H + V +A++ DG L S G D ++ +WD+
Sbjct: 633 GNCVRVFLGHTNSVNCLAVSPDGRWLASGGEDGIICVWDI 672
Score = 218 (81.8 bits), Expect = 4.8e-15, Sum P(2) = 4.8e-15
Identities = 63/218 (28%), Positives = 103/218 (47%)
Query: 392 LAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSK 451
L GHS V + + S +++ S+D +VRLW ++ + GH V V FS
Sbjct: 513 LIGHSGPVYGV---SFSPDNKYLLSCSEDKTVRLWSLDTYTALVSYKGHTQPVWDVKFSP 569
Query: 452 KLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCT 511
L ++ V+ S D T ++W+ D + P+ + A H D++ + PN + V T
Sbjct: 570 -LGHYFVTASHDQTARLWATDHI-----YPLR-----IFAGHINDVDCVEFHPNSNYVFT 618
Query: 512 GSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCL 571
GS D+T +W + V F GH + + SP + + + D I +W I G L
Sbjct: 619 GSSDKTCRMWDVHTGNCVRVFLGHTNSVNCLAVSPDGRWLASGGEDGIICVWDIGSGRRL 678
Query: 572 KTFEGHT-SSVLRASFLTRGAQIVSCGADGLVKLWTVR 608
K+ GH +S+ +F G +VS AD V++W V+
Sbjct: 679 KSMRGHARASLYSLAFSRDGTVLVSGCADNSVRVWDVK 716
Score = 206 (77.6 bits), Expect = 7.0e-13, P = 7.0e-13
Identities = 47/193 (24%), Positives = 92/193 (47%)
Query: 28 SSDGSFI-ACACGESINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRV 86
S D ++ +C+ +++ + L + + +G + + + SP ++ H + R+
Sbjct: 526 SPDNKYLLSCSEDKTVRLWSLDTYTALVSYKGHTQPVWDVKFSPLGHYFVTASHDQTARL 585
Query: 87 WDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGV 146
W + LR + GH + HP+ + T +D+ +WDV G C F GH
Sbjct: 586 WATDHIYPLRIFAGHINDVDCVEFHPNSNYVFTGSSDKTCRMWDVHTGNCVRVFLGHTNS 645
Query: 147 VSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHF-SRVTSMAITSDGSTLIS 205
V+ + PD L SG +D + VWD+ + + + ++ H + + S+A + DG+ L+S
Sbjct: 646 VNCLAVSPDG--RWLASGGEDGIICVWDIGSGRRLKSMRGHARASLYSLAFSRDGTVLVS 703
Query: 206 AGRDKVVNLWDLR 218
D V +WD++
Sbjct: 704 GCADNSVRVWDVK 716
Score = 129 (50.5 bits), Expect = 0.00015, P = 0.00015
Identities = 38/140 (27%), Positives = 56/140 (40%)
Query: 523 LPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTF-------- 574
LP V + TF + +EF+ +V D IK+WS+ DG LK+
Sbjct: 449 LPS-VCMYTFHNTNNNMTCIEFNDDSTLVAAGFQDSYIKLWSL-DGKPLKSVLKRDRHKP 506
Query: 575 -E------GHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALA 627
E GH+ V SF ++SC D V+LW++ T + +Y H +W +
Sbjct: 507 QENTRKLIGHSGPVYGVSFSPDNKYLLSCSEDKTVRLWSLDTYTALVSYKGHTQPVWDVK 566
Query: 628 VGKKTEMFATGGSDALVNLW 647
F T D LW
Sbjct: 567 FSPLGHYFVTASHDQTARLW 586
Score = 112 (44.5 bits), Expect = 5.3e-06, Sum P(2) = 5.3e-06
Identities = 31/112 (27%), Positives = 60/112 (53%)
Query: 368 YLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWD 427
Y+ ++ + +++D+ + +C V GH+ V CL A+S + +G +D + +WD
Sbjct: 615 YVFTGSSDKTCRMWDVHTGNCVRVFLGHTNSVNCL---AVSPDGRWLASGGEDGIICVWD 671
Query: 428 SESRCCVGVGTGHMGA-VGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDA 478
S + GH A + ++AFS+ LVSG +D++++VW ++DA
Sbjct: 672 IGSGRRLKSMRGHARASLYSLAFSRD-GTVLVSGCADNSVRVWDVKKNTNDA 722
Score = 80 (33.2 bits), Expect = 5.3e-06, Sum P(2) = 5.3e-06
Identities = 26/100 (26%), Positives = 45/100 (45%)
Query: 136 CTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAK--KCVATLDKHFSR--- 190
C + F ++ I F+ D+ +L+ +G D+ +++W L K K V D+H +
Sbjct: 453 CMYTFHNTNNNMTCIEFNDDS--TLVAAGFQDSYIKLWSLDGKPLKSVLKRDRHKPQENT 510
Query: 191 ---------VTSMAITSDGSTLISAGRDKVVNLWDLRDYS 221
V ++ + D L+S DK V LW L Y+
Sbjct: 511 RKLIGHSGPVYGVSFSPDNKYLLSCSEDKTVRLWSLDTYT 550
Score = 57 (25.1 bits), Expect = 3.4e-21, Sum P(2) = 3.4e-21
Identities = 14/43 (32%), Positives = 22/43 (51%)
Query: 176 LAKKCVATLDKHFSRVTSMAITSDGSTLISAG-RDKVVNLWDL 217
L C+ T + +T + D STL++AG +D + LW L
Sbjct: 449 LPSVCMYTFHNTNNNMTCIEFNDD-STLVAAGFQDSYIKLWSL 490
>FB|FBgn0027524 [details] [associations]
symbol:CG3909 species:7227 "Drosophila melanogaster"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
EMBL:AE014297 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
HSSP:P16649 GeneTree:ENSGT00700000104507 KO:K12602 EMBL:AF132174
RefSeq:NP_649969.1 UniGene:Dm.3198 SMR:Q9XZ19 IntAct:Q9XZ19
MINT:MINT-1753051 STRING:Q9XZ19 EnsemblMetazoa:FBtr0082172
GeneID:41226 KEGG:dme:Dmel_CG3909 UCSC:CG3909-RA
FlyBase:FBgn0027524 InParanoid:Q9XZ19 OMA:HETWVEC OrthoDB:EOG4R7SSH
GenomeRNAi:41226 NextBio:822821 Uniprot:Q9XZ19
Length = 331
Score = 258 (95.9 bits), Expect = 3.5e-21, P = 3.5e-21
Identities = 72/274 (26%), Positives = 137/274 (50%)
Query: 378 VQVYDL---SSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCV 434
V+V+DL +++ + L GH+ L + + A+SS I + S D+++ LWD+ S
Sbjct: 64 VKVWDLQEDNTLKLRHKLKGHA---LGVVSVAVSSDGQTIASSSLDSTMCLWDARSGDKK 120
Query: 435 GVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHG 494
+ + + V FS +++SG +D I ++S + + AEQ ++ A +G
Sbjct: 121 HLLSFGPVDLWTVQFSP-CNKYVISGLNDGKISMYSVE--TGKAEQTLD-------AQNG 170
Query: 495 KDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITA 554
K S+A +P+ + +G+ D ++ + V T GH + S+ FSP Q+++TA
Sbjct: 171 KYTLSIAYSPDGKYIASGAIDGIITIFDVAAGKVVQTLEGHAMPVRSLCFSPNSQLLLTA 230
Query: 555 SGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIA 614
S D +K++ ++ + T GH S VL +F G S +D VK+W +C+
Sbjct: 231 SDDGHMKLYDVTHSDVVGTLSGHASWVLCVAFSEDGKHFASSSSDNSVKIWDTSERKCLH 290
Query: 615 TYDKHEDKIWALAVGKKTEMFATGGSDALVNLWH 648
T+ +H D++W + + A+ D +N+++
Sbjct: 291 TFAEHTDQVWGVRYSPGNDKVASASEDKSLNIYY 324
Score = 204 (76.9 bits), Expect = 1.2e-13, P = 1.2e-13
Identities = 54/200 (27%), Positives = 94/200 (47%)
Query: 25 LVVSSDGSFIACACGESINIV-DLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSRE 83
+ VSSDG IA + +S + D + K + G + + SP +K + S + +
Sbjct: 91 VAVSSDGQTIASSSLDSTMCLWDARSGDKKHLLSFGPVDLWTVQFSPCNKYVISGLNDGK 150
Query: 84 IRVWDLSTLKCLRSWKGHDGP-AIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKG 142
I ++ + T K ++ +G + +A P G +A+ D + ++DV G +G
Sbjct: 151 ISMYSVETGKAEQTLDAQNGKYTLSIAYSPDGKYIASGAIDGIITIFDVAAGKVVQTLEG 210
Query: 143 HKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGST 202
H V S+ F P++ LL + SDD ++++D+ V TL H S V +A + DG
Sbjct: 211 HAMPVRSLCFSPNSQ--LLLTASDDGHMKLYDVTHSDVVGTLSGHASWVLCVAFSEDGKH 268
Query: 203 LISAGRDKVVNLWDLRDYSC 222
S+ D V +WD + C
Sbjct: 269 FASSSSDNSVKIWDTSERKC 288
Score = 178 (67.7 bits), Expect = 1.2e-10, P = 1.2e-10
Identities = 45/175 (25%), Positives = 83/175 (47%)
Query: 42 INIVDLSNASIKSTIEGGSDTIT-ALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKG 100
I++ + + T++ + T ++A SPD K + S I ++D++ K +++ +G
Sbjct: 151 ISMYSVETGKAEQTLDAQNGKYTLSIAYSPDGKYIASGAIDGIITIFDVAAGKVVQTLEG 210
Query: 101 HDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSL 160
H P + P+ LL TA D + ++DV GH V + F D K
Sbjct: 211 HAMPVRSLCFSPNSQLLLTASDDGHMKLYDVTHSDVVGTLSGHASWVLCVAFSED-GKHF 269
Query: 161 LFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLW 215
S SD++ V++WD +KC+ T +H +V + + + SA DK +N++
Sbjct: 270 ASSSSDNS-VKIWDTSERKCLHTFAEHTDQVWGVRYSPGNDKVASASEDKSLNIY 323
Score = 169 (64.5 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 58/244 (23%), Positives = 107/244 (43%)
Query: 411 KILIVTGSKDNSVRLWDSESRCCVGVG---TGHMGAVGAVAFSKKLQNFLVSGSSDHTIK 467
K +VTG D+ V++WD + + + GH V +VA S Q + S S D T+
Sbjct: 52 KDFLVTGGLDDLVKVWDLQEDNTLKLRHKLKGHALGVVSVAVSSDGQT-IASSSLDSTMC 110
Query: 468 VWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLV 527
+W D S D K +++ D+ ++ +P + V +G D ++ +
Sbjct: 111 LW--DARSGDK--------KHLLSFGPVDLWTVQFSPCNKYVISGLNDGKISMYSVETGK 160
Query: 528 SVVTFRGHK-RGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASF 586
+ T + S+ +SP + + + + D I I+ ++ G ++T EGH V F
Sbjct: 161 AEQTLDAQNGKYTLSIAYSPDGKYIASGAIDGIITIFDVAAGKVVQTLEGHAMPVRSLCF 220
Query: 587 LTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNL 646
+++ DG +KL+ V + + T H + +A + + FA+ SD V +
Sbjct: 221 SPNSQLLLTASDDGHMKLYDVTHSDVVGTLSGHASWVLCVAFSEDGKHFASSSSDNSVKI 280
Query: 647 WHDS 650
W S
Sbjct: 281 WDTS 284
Score = 164 (62.8 bits), Expect = 4.7e-09, P = 4.7e-09
Identities = 37/150 (24%), Positives = 73/150 (48%)
Query: 25 LVVSSDGSFIACACGESI-NIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSRE 83
+ S DG +IA + I I D++ + T+EG + + +L SP+ +LL ++
Sbjct: 176 IAYSPDGKYIASGAIDGIITIFDVAAGKVVQTLEGHAMPVRSLCFSPNSQLLLTASDDGH 235
Query: 84 IRVWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGH 143
++++D++ + + GH + +A G A++ +D V +WD C H F H
Sbjct: 236 MKLYDVTHSDVVGTLSGHASWVLCVAFSEDGKHFASSSSDNSVKIWDTSERKCLHTFAEH 295
Query: 144 KGVVSSILFHPDTDKSLLFSGSDDATVRVW 173
V + + P DK + S S+D ++ ++
Sbjct: 296 TDQVWGVRYSPGNDK--VASASEDKSLNIY 323
Score = 148 (57.2 bits), Expect = 2.9e-07, P = 2.9e-07
Identities = 54/215 (25%), Positives = 92/215 (42%)
Query: 30 DGSFIACACGESINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWDL 89
D AC G D +A ++ E D A P D L + G ++VWDL
Sbjct: 13 DSQLWACTWGRDTAASDPDDAVVEPE-ENPFDFDKKEA-RPKD-FLVTGGLDDLVKVWDL 69
Query: 90 ---STLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGV 146
+TLK KGH + +A G +A++ D + +WD G H
Sbjct: 70 QEDNTLKLRHKLKGHALGVVSVAVSSDGQTIASSSLDSTMCLWDARSGDKKHLLSFGPVD 129
Query: 147 VSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVT-SMAITSDGSTLIS 205
+ ++ F P +K ++ SG +D + ++ + K TLD + T S+A + DG + S
Sbjct: 130 LWTVQFSP-CNKYVI-SGLNDGKISMYSVETGKAEQTLDAQNGKYTLSIAYSPDGKYIAS 187
Query: 206 AGRDKVVNLWDLRDYSCKLTVPTYEM-VEAVCAIP 239
D ++ ++D+ T+ + M V ++C P
Sbjct: 188 GAIDGIITIFDVAAGKVVQTLEGHAMPVRSLCFSP 222
Score = 138 (53.6 bits), Expect = 3.8e-06, P = 3.8e-06
Identities = 65/283 (22%), Positives = 123/283 (43%)
Query: 158 KSLLFSGSDDATVRVWDLLAKKCVATLDK---HFSRVTSMAITSDGSTLISAGRDKVVNL 214
K L +G D V+VWDL + K H V S+A++SDG T+ S+ D + L
Sbjct: 52 KDFLVTGGLDDLVKVWDLQEDNTLKLRHKLKGHALGVVSVAVSSDGQTIASSSLDSTMCL 111
Query: 215 WDLRDYSCKLTVPTYEMVEA-VCAIPPGSAF------DSFLSSYNQQTIKKKRRSLEIHF 267
WD R K + ++ V+ P + + D +S Y+ +T K ++L+
Sbjct: 112 WDARSGDKKHLL-SFGPVDLWTVQFSPCNKYVISGLNDGKISMYSVET-GKAEQTLDAQN 169
Query: 268 ITVGERGIVRMWNADSACLYEQKSSDVTISFEMDDSKRGFTA-ATVLPSNQGLLCVTADQ 326
G+ + ++ D + + F++ K T +P LC + +
Sbjct: 170 ---GKYTLSIAYSPDGKYIASGAIDGIITIFDVAAGKVVQTLEGHAMPVRS--LCFSPNS 224
Query: 327 QLLLYTTVEVPEKKMELILSK---RLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDL 383
QLLL + + K ++ S L G+ +L + F E+ ++ A +++ V+++D
Sbjct: 225 QLLLTASDDGHMKLYDVTHSDVVGTLSGHASWVLCVAF-SEDGKHFASSSSDNSVKIWDT 283
Query: 384 SSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLW 426
S C + A H++ V + S G + + S+D S+ ++
Sbjct: 284 SERKCLHTFAEHTDQVWGV---RYSPGNDKVASASEDKSLNIY 323
Score = 132 (51.5 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 42/158 (26%), Positives = 76/158 (48%)
Query: 367 QYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLW 426
+Y+A + ++D+++ L GH+ V L C S L++T S D ++L+
Sbjct: 183 KYIASGAIDGIITIFDVAAGKVVQTLEGHAMPVRSL--C-FSPNSQLLLTASDDGHMKLY 239
Query: 427 DSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKA 486
D VG +GH V VAFS+ ++F S SSD+++K+W D +E+ K
Sbjct: 240 DVTHSDVVGTLSGHASWVLCVAFSEDGKHF-ASSSSDNSVKIW------DTSER----KC 288
Query: 487 KAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLP 524
A H + + +P + V + S+D++ ++ P
Sbjct: 289 LHTFAEHTDQVWGVRYSPGNDKVASASEDKSLNIYYCP 326
>ASPGD|ASPL0000008575 [details] [associations]
symbol:AN6217 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 EMBL:BN001301 EMBL:AACD01000105 KO:K03361
RefSeq:XP_663821.1 ProteinModelPortal:Q5AZR3 STRING:Q5AZR3
EnsemblFungi:CADANIAT00006785 GeneID:2870808 KEGG:ani:AN6217.2
HOGENOM:HOG000164406 OMA:SISEGRC OrthoDB:EOG4XWK5Z Uniprot:Q5AZR3
Length = 618
Score = 207 (77.9 bits), Expect = 3.6e-13, P = 3.6e-13
Identities = 56/194 (28%), Positives = 90/194 (46%)
Query: 25 LVVSSDGSFIACACGESINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREI 84
L +S + I+ + ++ I DL + +S + G ++ LA+ D ++ S +
Sbjct: 338 LKMSDKNTAISGSRDTTLRIWDLRTGTCRSVLVGHQASVRCLAVHGD--IVVSGSYDTTA 395
Query: 85 RVWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHK 144
RVW +S + LR+ GH +A G +AT D V +WD + G C +GH
Sbjct: 396 RVWSISEGRFLRALSGHFSQIYAIAF--DGRRIATGSLDTSVRIWDPNTGQCHAILQGHT 453
Query: 145 GVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLI 204
+V + DT L +G D +VRVW L + L H + VTS+ D + ++
Sbjct: 454 SLVGQLQMSGDT----LVTGGSDGSVRVWSLTRMAPIHRLAAHDNSVTSLQF--DNNRIV 507
Query: 205 SAGRDKVVNLWDLR 218
S G D V +W LR
Sbjct: 508 SGGSDGRVKVWCLR 521
Score = 206 (77.6 bits), Expect = 4.6e-13, P = 4.6e-13
Identities = 55/190 (28%), Positives = 88/190 (46%)
Query: 34 IACACGESINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLK 93
+A I++ D +N + T+EG + A+ P D +L S G RE+RVW+++T +
Sbjct: 267 VASLDNAKIHVYD-TNGENQKTLEG--HVMGVWAMVPWDNILVSGGCDREVRVWNMATGE 323
Query: 94 CLRSWKGHDGPAIGMACHPSGGLLATAGA-DRKVLVWDVDGGFCTHYFKGHKGVVSSILF 152
+ +GH S A +G+ D + +WD+ G C GH+ V +
Sbjct: 324 SIYLLRGHTSTV--RCLKMSDKNTAISGSRDTTLRIWDLRTGTCRSVLVGHQASVRCLAV 381
Query: 153 HPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVV 212
H D ++ SGS D T RVW + + + L HFS++ AI DG + + D V
Sbjct: 382 HGD----IVVSGSYDTTARVWSISEGRFLRALSGHFSQI--YAIAFDGRRIATGSLDTSV 435
Query: 213 NLWDLRDYSC 222
+WD C
Sbjct: 436 RIWDPNTGQC 445
Score = 197 (74.4 bits), Expect = 2.3e-11, Sum P(2) = 2.3e-11
Identities = 57/209 (27%), Positives = 92/209 (44%)
Query: 439 GHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDIN 498
GH+ V A+ N LVSG D ++VW+ E L+ H +
Sbjct: 290 GHVMGVWAMV---PWDNILVSGGCDREVRVWNMA----TGESIYLLRG------HTSTVR 336
Query: 499 SLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDK 558
L ++ ++ + +GS+D T +W L GH+ + + +V++ S D
Sbjct: 337 CLKMSDKNTAI-SGSRDTTLRIWDLRTGTCRSVLVGHQASVRCLAVH--GDIVVSGSYDT 393
Query: 559 TIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDK 618
T ++WSIS+G L+ GH S + +F G +I + D V++W TG+C A
Sbjct: 394 TARVWSISEGRFLRALSGHFSQIYAIAF--DGRRIATGSLDTSVRIWDPNTGQCHAILQG 451
Query: 619 HEDKIWALAVGKKTEMFATGGSDALVNLW 647
H + L + T TGGSD V +W
Sbjct: 452 HTSLVGQLQMSGDT--LVTGGSDGSVRVW 478
Score = 187 (70.9 bits), Expect = 2.9e-10, Sum P(2) = 2.9e-10
Identities = 55/215 (25%), Positives = 98/215 (45%)
Query: 367 QYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLW 426
+Y+ + + ++ VYD + + L GH + A+ ++V+G D VR+W
Sbjct: 264 KYIVASLDNAKIHVYDTNGEN-QKTLEGH-----VMGVWAMVPWDNILVSGGCDREVRVW 317
Query: 427 DSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKA 486
+ + + + GH V + S K N +SGS D T+++W
Sbjct: 318 NMATGESIYLLRGHTSTVRCLKMSDK--NTAISGSRDTTLRIWDL----------RTGTC 365
Query: 487 KAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSP 546
++V+ H + LAV + +V +GS D TA VW + + + GH I+++ F
Sbjct: 366 RSVLVGHQASVRCLAV--HGDIVVSGSYDTTARVWSISEGRFLRALSGHFSQIYAIAFD- 422
Query: 547 VDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSV 581
+ + T S D +++IW + G C +GHTS V
Sbjct: 423 -GRRIATGSLDTSVRIWDPNTGQCHAILQGHTSLV 456
Score = 182 (69.1 bits), Expect = 1.0e-09, Sum P(2) = 1.0e-09
Identities = 44/152 (28%), Positives = 74/152 (48%)
Query: 501 AVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTI 560
A+ P D+++ +G DR VW + S+ RGH + ++ S + I+ S D T+
Sbjct: 297 AMVPWDNILVSGGCDREVRVWNMATGESIYLLRGHTSTVRCLKMSDKN-TAISGSRDTTL 355
Query: 561 KIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHE 620
+IW + G+C GH +SV R G +VS D ++W++ G + H
Sbjct: 356 RIWDLRTGTCRSVLVGHQASV-RC-LAVHGDIVVSGSYDTTARVWSISEGRFLRALSGHF 413
Query: 621 DKIWALAV-GKKTEMFATGGSDALVNLWHDST 651
+I+A+A G++ ATG D V +W +T
Sbjct: 414 SQIYAIAFDGRR---IATGSLDTSVRIWDPNT 442
Score = 170 (64.9 bits), Expect = 3.5e-21, Sum P(2) = 3.5e-21
Identities = 45/158 (28%), Positives = 79/158 (50%)
Query: 63 ITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGM-ACHPSGGLLATAG 121
+T+L L+P K + +S + +I V+D + + K +G +G+ A P +L + G
Sbjct: 256 VTSLHLTP--KYIVASLDNAKIHVYDTNG----ENQKTLEGHVMGVWAMVPWDNILVSGG 309
Query: 122 ADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCV 181
DR+V VW++ G + +GH V + +DK+ SGS D T+R+WDL C
Sbjct: 310 CDREVRVWNMATGESIYLLRGHTSTVRCLKM---SDKNTAISGSRDTTLRIWDLRTGTCR 366
Query: 182 ATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRD 219
+ L H + V +A+ G ++S D +W + +
Sbjct: 367 SVLVGHQASVRCLAV--HGDIVVSGSYDTTARVWSISE 402
Score = 163 (62.4 bits), Expect = 3.5e-21, Sum P(2) = 3.5e-21
Identities = 48/195 (24%), Positives = 91/195 (46%)
Query: 455 NFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQ 514
+ +VSGS D T +VWS + L+A ++ H I A+A + + TGS
Sbjct: 384 DIVVSGSYDTTARVWSIS-------EGRFLRA---LSGHFSQI--YAIAFDGRRIATGSL 431
Query: 515 DRTACVWRLPDLVSV-VTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKT 573
D + +W P+ +GH + ++ S ++T D ++++WS++ + +
Sbjct: 432 DTSVRIWD-PNTGQCHAILQGHTSLVGQLQMS--GDTLVTGGSDGSVRVWSLTRMAPIHR 488
Query: 574 FEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGK-KT 632
H +SV F +IVS G+DG VK+W +RTG+ + D +W + + K
Sbjct: 489 LAAHDNSVTSLQFDNN--RIVSGGSDGRVKVWCLRTGQLLRELSTPSDTVWRVTFEEEKA 546
Query: 633 EMFATGGSDALVNLW 647
+ ++ ++ +W
Sbjct: 547 VIMSSRSGRTVMEVW 561
Score = 157 (60.3 bits), Expect = 7.3e-15, Sum P(2) = 7.3e-15
Identities = 58/220 (26%), Positives = 99/220 (45%)
Query: 349 LVGYNEEILDLKFLGEEEQYLAVATNIEQV-QVYDLSSMSCSYVLAGHSEIVLCLDTCAL 407
LVG+ + L G+ + V+ + + +V+ +S L+GH + + A
Sbjct: 369 LVGHQASVRCLAVHGD----IVVSGSYDTTARVWSISEGRFLRALSGHFSQIYAI---AF 421
Query: 408 SSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIK 467
+I TGS D SVR+WD + C + GH VG + S + LV+G SD +++
Sbjct: 422 DGRRI--ATGSLDTSVRIWDPNTGQCHAILQGHTSLVGQLQMSG---DTLVTGGSDGSVR 476
Query: 468 VWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLV 527
VWS ++ P++ +AAH + SL N+ +V GS R VW L
Sbjct: 477 VWSLTRMA-----PIHR-----LAAHDNSVTSLQF-DNNRIVSGGSDGRVK-VWCLRTGQ 524
Query: 528 SVVTFRGHKRGIWSVEFSPVDQVVITASGDKTI-KIWSIS 566
+ +W V F V++++ +T+ ++WS S
Sbjct: 525 LLRELSTPSDTVWRVTFEEEKAVIMSSRSGRTVMEVWSFS 564
Score = 139 (54.0 bits), Expect = 8.9e-06, P = 8.9e-06
Identities = 50/195 (25%), Positives = 82/195 (42%)
Query: 23 GPLVVSSDGSFIACACGESINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSR 82
G +VVS GS+ A + +S + G I A+A D + + +
Sbjct: 383 GDIVVS--GSYDTTA-----RVWSISEGRFLRALSGHFSQIYAIAF--DGRRIATGSLDT 433
Query: 83 EIRVWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKG 142
+R+WD +T +C +GH +G SG L T G+D V VW + H
Sbjct: 434 SVRIWDPNTGQCHAILQGHTS-LVGQL-QMSGDTLVTGGSDGSVRVWSLTRMAPIHRLAA 491
Query: 143 HKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGST 202
H V+S+ F D + + SG D V+VW L + + L V + + +
Sbjct: 492 HDNSVTSLQF----DNNRIVSGGSDGRVKVWCLRTGQLLRELSTPSDTVWRVTFEEEKAV 547
Query: 203 LISA--GRDKVVNLW 215
++S+ GR V+ +W
Sbjct: 548 IMSSRSGRT-VMEVW 561
Score = 116 (45.9 bits), Expect = 1.6e-15, Sum P(2) = 1.6e-15
Identities = 37/131 (28%), Positives = 64/131 (48%)
Query: 96 RSWKGHDGPAIGM--ACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGH-KGVVSSILF 152
R + H P G+ + H + + + + K+ V+D +G +GH GV + + +
Sbjct: 243 RCTQRHISPDQGVVTSLHLTPKYIVASLDNAKIHVYDTNGEN-QKTLEGHVMGVWAMVPW 301
Query: 153 HPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVV 212
++L SG D VRVW++ + + L H S V + + SD +T IS RD +
Sbjct: 302 D-----NILVSGGCDREVRVWNMATGESIYLLRGHTSTVRCLKM-SDKNTAISGSRDTTL 355
Query: 213 NLWDLRDYSCK 223
+WDLR +C+
Sbjct: 356 RIWDLRTGTCR 366
Score = 40 (19.1 bits), Expect = 2.3e-11, Sum P(2) = 2.3e-11
Identities = 13/54 (24%), Positives = 22/54 (40%)
Query: 240 PGSAFDSFLSSYNQQTIKKKRRSLEIHFITVGERGIVRMWNADSACLYEQKSSD 293
P S +++S + QT K++ R L + + I W+ C S D
Sbjct: 199 PRSLSGDWIASSSIQTRKRRVRPLSYKYHFKQKYMIESAWSKGGRCTQRHISPD 252
>RGD|1308228 [details] [associations]
symbol:Wdr61 "WD repeat domain 61" species:10116 "Rattus
norvegicus" [GO:0005634 "nucleus" evidence=ISO;ISS] [GO:0005737
"cytoplasm" evidence=ISO;ISS] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0016055 "Wnt receptor signaling
pathway" evidence=IEA] [GO:0016593 "Cdc73/Paf1 complex"
evidence=ISO;ISS] [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=ISO;ISS]
[GO:0035327 "transcriptionally active chromatin" evidence=ISO;ISS]
[GO:0045638 "negative regulation of myeloid cell differentiation"
evidence=ISO;ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISO;ISS] [GO:0051571
"positive regulation of histone H3-K4 methylation"
evidence=ISO;ISS] [GO:0055087 "Ski complex" evidence=ISO;ISS]
[GO:0080182 "histone H3-K4 trimethylation" evidence=ISO;ISS]
[GO:2001162 "positive regulation of histone H3-K79 methylation"
evidence=ISO;ISS] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1308228 GO:GO:0016055 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0006351
GO:GO:0035327 GO:GO:0051571 GO:GO:0032968 GO:GO:0080182
GO:GO:0016593 GO:GO:0045638 GO:GO:2001162 GO:GO:0055087 CTD:80349
HOGENOM:HOG000036765 HOVERGEN:HBG059813 KO:K12602 OrthoDB:EOG4VMFFW
EMBL:BC098059 IPI:IPI00366523 RefSeq:NP_001020914.1 UniGene:Rn.3698
ProteinModelPortal:Q4V7A0 STRING:Q4V7A0 PRIDE:Q4V7A0 GeneID:363064
KEGG:rno:363064 UCSC:RGD:1308228 InParanoid:Q4V7A0 NextBio:682300
ArrayExpress:Q4V7A0 Genevestigator:Q4V7A0
GermOnline:ENSRNOG00000012803 Uniprot:Q4V7A0
Length = 305
Score = 243 (90.6 bits), Expect = 3.7e-21, Sum P(2) = 3.7e-21
Identities = 74/263 (28%), Positives = 123/263 (46%)
Query: 386 MSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSES-RCCVGVGTGHMGAV 444
+ + L GH V+ +D +S + + S D +RLWD E+ + + G + A
Sbjct: 54 LELQWSLEGHQLGVVSVD---ISHTLPIAASSSLDAHIRLWDLENGKQMKSIDAGPVDA- 109
Query: 445 GAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAP 504
+AFS Q+ L +G+ H KV F S E ++ + GK I S+A +P
Sbjct: 110 WTLAFSPDSQH-LATGT--HMGKVNIFGVESGKKEYSLDTR--------GKFILSIAYSP 158
Query: 505 NDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWS 564
+ + +G+ D ++ + + T GH I S+ FSP Q+++TAS D IKI+
Sbjct: 159 DGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYD 218
Query: 565 ISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIW 624
+ + T GH S VL +F VS +D VK+W V T CI T+ H+D++W
Sbjct: 219 VQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCIHTFFDHQDQVW 278
Query: 625 ALAVGKKTEMFATGGSDALVNLW 647
+ + G D ++++
Sbjct: 279 GVKYNGNGSKIVSVGDDQEIHVY 301
Score = 217 (81.4 bits), Expect = 8.9e-16, P = 8.9e-16
Identities = 54/193 (27%), Positives = 92/193 (47%)
Query: 25 LVVSSDGSFIACACGES-INIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSRE 83
L S D +A +NI + + + +++ I ++A SPD K L S
Sbjct: 112 LAFSPDSQHLATGTHMGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGI 171
Query: 84 IRVWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGH 143
I ++D++T K L + +GH P + P LL TA D + ++DV GH
Sbjct: 172 INIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGH 231
Query: 144 KGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTL 203
V ++ F PD D + S S D +V+VWD+ + C+ T H +V + +GS +
Sbjct: 232 ASWVLNVAFCPD-DTHFV-SSSSDKSVKVWDVGTRTCIHTFFDHQDQVWGVKYNGNGSKI 289
Query: 204 ISAGRDKVVNLWD 216
+S G D+ ++++D
Sbjct: 290 VSVGDDQEIHVYD 302
Score = 207 (77.9 bits), Expect = 2.5e-14, P = 2.5e-14
Identities = 50/181 (27%), Positives = 86/181 (47%)
Query: 42 INIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGH 101
I + DL N +I+ G LA SPD + L + H ++ ++ + + K S
Sbjct: 88 IRLWDLENGKQMKSIDAGPVDAWTLAFSPDSQHLATGTHMGKVNIFGVESGKKEYSLDTR 147
Query: 102 DGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLL 161
+ +A P G LA+ D + ++D+ G H +GH + S+ F PD+ LL
Sbjct: 148 GKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQ--LL 205
Query: 162 FSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYS 221
+ SDD ++++D+ TL H S V ++A D + +S+ DK V +WD+ +
Sbjct: 206 VTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRT 265
Query: 222 C 222
C
Sbjct: 266 C 266
Score = 160 (61.4 bits), Expect = 1.7e-08, Sum P(2) = 1.7e-08
Identities = 58/240 (24%), Positives = 100/240 (41%)
Query: 414 IVTGSKDNSVRLWD-SESRCCVGVGT-GHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSF 471
+VTGS D+ V++W + R + GH V +V S L S S D I++W
Sbjct: 35 VVTGSLDDLVKVWKWRDERLELQWSLEGHQLGVVSVDISHTLP-IAASSSLDAHIRLW-- 91
Query: 472 DGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVT 531
D E +K+ + A D +LA +P+ + TG+ ++ + +
Sbjct: 92 -----DLENGKQMKS---IDAGPVDAWTLAFSPDSQHLATGTHMGKVNIFGVESGKKEYS 143
Query: 532 FRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGA 591
+ I S+ +SP + + + + D I I+ I+ G L T EGH + +F
Sbjct: 144 LDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQ 203
Query: 592 QIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLWHDST 651
+V+ DG +K++ V+ T H + +A F + SD V +W T
Sbjct: 204 LLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGT 263
Score = 148 (57.2 bits), Expect = 4.2e-07, Sum P(2) = 4.2e-07
Identities = 46/200 (23%), Positives = 93/200 (46%)
Query: 365 EEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALS-SGKILIVTGSKDNSV 423
+ Q+LA T++ +V ++ + S Y L + +L + A S GK L +G+ D +
Sbjct: 117 DSQHLATGTHMGKVNIFGVESGKKEYSLDTRGKFILSI---AYSPDGKYL-ASGAIDGII 172
Query: 424 RLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMN 483
++D + + GH + ++ FS Q LV+ S D IK++ Q N
Sbjct: 173 NIFDIATGKLLHTLEGHAMPIRSLTFSPDSQ-LLVTASDDGYIKIYDV--------QHAN 223
Query: 484 LKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVE 543
L ++ H + ++A P+D+ + S D++ VW + + TF H+ +W V+
Sbjct: 224 LAG--TLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCIHTFFDHQDQVWGVK 281
Query: 544 FSPVDQVVITASGDKTIKIW 563
++ +++ D+ I ++
Sbjct: 282 YNGNGSKIVSVGDDQEIHVY 301
Score = 146 (56.5 bits), Expect = 4.0e-07, P = 4.0e-07
Identities = 48/203 (23%), Positives = 90/203 (44%)
Query: 55 TIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPSG 114
++EG + ++ +S + SS IR+WDL K ++S A +A P
Sbjct: 59 SLEGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLENGKQMKSIDAGPVDAWTLAFSPDS 118
Query: 115 GLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWD 174
LAT KV ++ V+ G + + SI + PD L SG+ D + ++D
Sbjct: 119 QHLATGTHMGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDG--KYLASGAIDGIINIFD 176
Query: 175 LLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYEMVEA 234
+ K + TL+ H + S+ + D L++A D + ++D++ + T+ +
Sbjct: 177 IATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVL 236
Query: 235 VCAIPPGSAFDSFLSSYNQQTIK 257
A P F+SS + +++K
Sbjct: 237 NVAFCPDDTH--FVSSSSDKSVK 257
Score = 124 (48.7 bits), Expect = 0.00011, P = 0.00011
Identities = 37/150 (24%), Positives = 71/150 (47%)
Query: 505 NDSLVCTGSQDRTACVWRLPD--LVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKI 562
N V TGS D VW+ D L + GH+ G+ SV+ S + ++S D I++
Sbjct: 31 NIETVVTGSLDDLVKVWKWRDERLELQWSLEGHQLGVVSVDISHTLPIAASSSLDAHIRL 90
Query: 563 WSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGAD-GLVKLWTVRTGECIATYDKHED 621
W + +G +K+ + +F + +Q ++ G G V ++ V +G+ + D
Sbjct: 91 WDLENGKQMKSIDAGPVDAWTLAF-SPDSQHLATGTHMGKVNIFGVESGKKEYSLDTRGK 149
Query: 622 KIWALAVGKKTEMFATGGSDALVNLWHDST 651
I ++A + A+G D ++N++ +T
Sbjct: 150 FILSIAYSPDGKYLASGAIDGIINIFDIAT 179
Score = 111 (44.1 bits), Expect = 9.5e-09, Sum P(2) = 9.5e-09
Identities = 33/121 (27%), Positives = 56/121 (46%)
Query: 349 LVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALS 408
L G+ I L F + Q L A++ +++YD+ + + L+GH+ VL + C
Sbjct: 186 LEGHAMPIRSLTF-SPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDD 244
Query: 409 SGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKV 468
+ V+ S D SV++WD +R C+ H V V ++ +VS D I V
Sbjct: 245 TH---FVSSSSDKSVKVWDVGTRTCIHTFFDHQDQVWGVKYNGNGSK-IVSVGDDQEIHV 300
Query: 469 W 469
+
Sbjct: 301 Y 301
Score = 96 (38.9 bits), Expect = 9.5e-09, Sum P(2) = 9.5e-09
Identities = 28/136 (20%), Positives = 60/136 (44%)
Query: 84 IRVWDLSTLKCLRSW--KGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFK 141
++VW + W +GH + + + + A++ D + +WD++ G
Sbjct: 44 VKVWKWRDERLELQWSLEGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLENGKQMKSID 103
Query: 142 GHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGS 201
++ F PD+ L +G+ V ++ + + K +LD + S+A + DG
Sbjct: 104 AGPVDAWTLAFSPDSQH--LATGTHMGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGK 161
Query: 202 TLISAGRDKVVNLWDL 217
L S D ++N++D+
Sbjct: 162 YLASGAIDGIINIFDI 177
Score = 39 (18.8 bits), Expect = 3.7e-21, Sum P(2) = 3.7e-21
Identities = 7/23 (30%), Positives = 13/23 (56%)
Query: 202 TLISAGRDKVVNLWDLRDYSCKL 224
T+++ D +V +W RD +L
Sbjct: 34 TVVTGSLDDLVKVWKWRDERLEL 56
>FB|FBgn0021874 [details] [associations]
symbol:Nle "Notchless" species:7227 "Drosophila melanogaster"
[GO:0007219 "Notch signaling pathway" evidence=ISS;TAS] [GO:0005112
"Notch binding" evidence=TAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0005634 EMBL:AE014134
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GO:GO:0005112 GeneTree:ENSGT00690000102167 InterPro:IPR011047
SUPFAM:SSF50998 HSSP:P16649 PRINTS:PR00319 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 FlyBase:FBgn0021874 EMBL:AY089286
RefSeq:NP_477294.2 UniGene:Dm.13475 SMR:Q9VPR4 IntAct:Q9VPR4
MINT:MINT-291987 STRING:Q9VPR4 EnsemblMetazoa:FBtr0078075
GeneID:33234 KEGG:dme:Dmel_CG2863 UCSC:CG2863-RA CTD:33234
InParanoid:Q9VPR4 GenomeRNAi:33234 NextBio:782583 Uniprot:Q9VPR4
Length = 488
Score = 271 (100.5 bits), Expect = 1.6e-20, P = 1.6e-20
Identities = 72/279 (25%), Positives = 129/279 (46%)
Query: 369 LAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDS 428
LA A+ +++D+ C +AGH+ V T G LI T SKD +V++W +
Sbjct: 224 LASASGDGDCRIWDVKLGQCLMNIAGHTNAV----TAVRWGGAGLIYTSSKDRTVKMWRA 279
Query: 429 ESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKA 488
+GH V +A S +D+ ++ F + D ++ ++L +
Sbjct: 280 ADGILCRTFSGHAHWVNNIALS-----------TDYVLRTGPFHPVKDRSKSHLSLSTEE 328
Query: 489 VVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVD 548
+ + K ++ +SLV S D T +WR V GH+ + V++SP
Sbjct: 329 LQESALKRYQAVCPDEVESLVSC-SDDNTLYLWRNNQNKCVERMTGHQNVVNDVKYSPDV 387
Query: 549 QVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVR 608
+++ +AS DK++++W SDG + TF GH +V ++ IVS D +K+W+V+
Sbjct: 388 KLIASASFDKSVRLWRASDGQYMATFRGHVQAVYTVAWSADSRLIVSGSKDSTLKVWSVQ 447
Query: 609 TGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLW 647
T + H D+++ + A+GG D ++ LW
Sbjct: 448 TKKLAQELPGHADEVFGVDWAPDGSRVASGGKDKVIKLW 486
Score = 200 (75.5 bits), Expect = 1.3e-12, P = 1.3e-12
Identities = 46/150 (30%), Positives = 71/150 (47%)
Query: 67 ALSPDD-KLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRK 125
A+ PD+ + L S + +W + KC+ GH + P L+A+A D+
Sbjct: 339 AVCPDEVESLVSCSDDNTLYLWRNNQNKCVERMTGHQNVVNDVKYSPDVKLIASASFDKS 398
Query: 126 VLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLD 185
V +W G F+GH V ++ + D L+ SGS D+T++VW + KK L
Sbjct: 399 VRLWRASDGQYMATFRGHVQAVYTVAW--SADSRLIVSGSKDSTLKVWSVQTKKLAQELP 456
Query: 186 KHFSRVTSMAITSDGSTLISAGRDKVVNLW 215
H V + DGS + S G+DKV+ LW
Sbjct: 457 GHADEVFGVDWAPDGSRVASGGKDKVIKLW 486
Score = 190 (71.9 bits), Expect = 1.6e-11, P = 1.6e-11
Identities = 92/400 (23%), Positives = 171/400 (42%)
Query: 93 KCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFK--GHKGVVSSI 150
+C S GH + + P G LA+ D V +WD++ T +F GHK V +
Sbjct: 110 RCTSSMPGHAEAVVSLNFSPDGAHLASGSGDTTVRLWDLNTE--TPHFTCTGHKQWVLCV 167
Query: 151 LFHPDTDKSLLFSGSDDATVRVWDL-LAKKCVATLDKHFSRVTSMAITS-----DGSTLI 204
+ PD + L SG ++ +WD ++ L H + +A + L
Sbjct: 168 SWAPDGKR--LASGCKAGSIIIWDPETGQQKGRPLSGHKKHINCLAWEPYHRDPECRKLA 225
Query: 205 SAGRDKVVNLWDLRDYSCKLTVPTYEMVEAVCAIPPGSAFDSFLSSYNQQTIKKKR---- 260
SA D +WD++ C + + + AV A+ G A + SS +T+K R
Sbjct: 226 SASGDGDCRIWDVKLGQCLMNIAGH--TNAVTAVRWGGAGLIYTSS-KDRTVKMWRAADG 282
Query: 261 ---RSLEIHFITVGERGIVRMWNADSACLY---EQKSSDVTISFE--MDDSKRGFTAATV 312
R+ H V + + + + ++ S +++S E + + + + A V
Sbjct: 283 ILCRTFSGHAHWVNNIALSTDYVLRTGPFHPVKDRSKSHLSLSTEELQESALKRYQA--V 340
Query: 313 LPSN-QGLLCVTADQQLLLYTTVEVPEKKMELILSKRLVGYNEEILDLKFLGEEEQYLAV 371
P + L+ + D L L+ + K +E R+ G+ + D+K+ + + +A
Sbjct: 341 CPDEVESLVSCSDDNTLYLWRNNQ--NKCVE-----RMTGHQNVVNDVKY-SPDVKLIAS 392
Query: 372 ATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESR 431
A+ + V+++ S GH + V T A S+ LIV+GSKD+++++W +++
Sbjct: 393 ASFDKSVRLWRASDGQYMATFRGHVQAVY---TVAWSADSRLIVSGSKDSTLKVWSVQTK 449
Query: 432 CCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSF 471
GH V V ++ + SG D IK+W++
Sbjct: 450 KLAQELPGHADEVFGVDWAPDGSR-VASGGKDKVIKLWAY 488
Score = 175 (66.7 bits), Expect = 3.8e-21, Sum P(2) = 3.8e-21
Identities = 46/171 (26%), Positives = 82/171 (47%)
Query: 54 STIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPS 113
S++ G ++ + +L SPD L S +R+WDL+T + GH + ++ P
Sbjct: 113 SSMPGHAEAVVSLNFSPDGAHLASGSGDTTVRLWDLNTETPHFTCTGHKQWVLCVSWAPD 172
Query: 114 GGLLATAGADRKVLVWDVDGGFCT-HYFKGHKGVVSSIL---FHPDTDKSLLFSGSDDAT 169
G LA+ +++WD + G GHK ++ + +H D + L S S D
Sbjct: 173 GKRLASGCKAGSIIIWDPETGQQKGRPLSGHKKHINCLAWEPYHRDPECRKLASASGDGD 232
Query: 170 VRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLI-SAGRDKVVNLWDLRD 219
R+WD+ +C+ + H + VT A+ G+ LI ++ +D+ V +W D
Sbjct: 233 CRIWDVKLGQCLMNIAGHTNAVT--AVRWGGAGLIYTSSKDRTVKMWRAAD 281
Score = 169 (64.5 bits), Expect = 3.3e-09, P = 3.3e-09
Identities = 58/266 (21%), Positives = 113/266 (42%)
Query: 392 LAGHSEIVLCL--DTCALSSGKILIVTGSKDNSVRLWDSE-SRCCVGVGTGHMGAVGAVA 448
L+GH + + CL + + + S D R+WD + +C + + GH AV AV
Sbjct: 200 LSGHKKHINCLAWEPYHRDPECRKLASASGDGDCRIWDVKLGQCLMNIA-GHTNAVTAVR 258
Query: 449 FSKKLQNFLVSGSSDHTIKVW-SFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDS 507
+ + + S D T+K+W + DG+ + H +N++A++ D
Sbjct: 259 WGGA--GLIYTSSKDRTVKMWRAADGI-----------LCRTFSGHAHWVNNIALS-TDY 304
Query: 508 LVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQV--VITASGDKTIKIWSI 565
++ TG R +S+ T + + + D+V +++ S D T+ +W
Sbjct: 305 VLRTGPFHPVKD--RSKSHLSLSTEELQESALKRYQAVCPDEVESLVSCSDDNTLYLWRN 362
Query: 566 SDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWA 625
+ C++ GH + V + I S D V+LW G+ +AT+ H ++
Sbjct: 363 NQNKCVERMTGHQNVVNDVKYSPDVKLIASASFDKSVRLWRASDGQYMATFRGHVQAVYT 422
Query: 626 LAVGKKTEMFATGGSDALVNLWHDST 651
+A + + +G D+ + +W T
Sbjct: 423 VAWSADSRLIVSGSKDSTLKVWSVQT 448
Score = 154 (59.3 bits), Expect = 3.8e-21, Sum P(2) = 3.8e-21
Identities = 42/151 (27%), Positives = 73/151 (48%)
Query: 414 IVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDG 473
+V+ S DN++ LW + CV TGH V V +S ++ + S S D ++++W
Sbjct: 348 LVSCSDDNTLYLWRNNQNKCVERMTGHQNVVNDVKYSPDVK-LIASASFDKSVRLWR--- 403
Query: 474 LSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFR 533
SD Q M A H + + ++A + + L+ +GS+D T VW +
Sbjct: 404 ASDG--QYM-----ATFRGHVQAVYTVAWSADSRLIVSGSKDSTLKVWSVQTKKLAQELP 456
Query: 534 GHKRGIWSVEFSPVDQVVITASGDKTIKIWS 564
GH ++ V+++P V + DK IK+W+
Sbjct: 457 GHADEVFGVDWAPDGSRVASGGKDKVIKLWA 487
Score = 142 (55.0 bits), Expect = 1.5e-17, Sum P(2) = 1.5e-17
Identities = 47/179 (26%), Positives = 79/179 (44%)
Query: 28 SSDGSFIACACGES-INIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRV 86
S DG+ +A G++ + + DL+ + T G + ++ +PD K L S + I +
Sbjct: 128 SPDGAHLASGSGDTTVRLWDLNTETPHFTCTGHKQWVLCVSWAPDGKRLASGCKAGSIII 187
Query: 87 WDLSTLKCL-RSWKGHDGPAIGMAC---H--PSGGLLATAGADRKVLVWDVDGGFCTHYF 140
WD T + R GH +A H P LA+A D +WDV G C
Sbjct: 188 WDPETGQQKGRPLSGHKKHINCLAWEPYHRDPECRKLASASGDGDCRIWDVKLGQCLMNI 247
Query: 141 KGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSD 199
GH V+++ + L+++ S D TV++W T H V ++A+++D
Sbjct: 248 AGHTNAVTAVRWG---GAGLIYTSSKDRTVKMWRAADGILCRTFSGHAHWVNNIALSTD 303
Score = 129 (50.5 bits), Expect = 7.7e-05, P = 7.7e-05
Identities = 51/220 (23%), Positives = 96/220 (43%)
Query: 438 TGHMGAVGAVAFSKKLQNFL--VSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGK 495
T ++ VG K L++ L S +++ I + + + +P+ + + + H +
Sbjct: 63 TPYLFFVGEDEIKKSLEDTLDLASVDTENVIDI-VYQPQAVFKVRPVT-RCTSSMPGHAE 120
Query: 496 DINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITAS 555
+ SL +P+ + + +GS D T +W L T GHK+ + V ++P + + AS
Sbjct: 121 AVVSLNFSPDGAHLASGSGDTTVRLWDLNTETPHFTCTGHKQWVLCVSWAPDGKRL--AS 178
Query: 556 GDK--TIKIWSISDGSCL-KTFEGHTSSV--LRASFLTRGAQ---IVSCGADGLVKLWTV 607
G K +I IW G + GH + L R + + S DG ++W V
Sbjct: 179 GCKAGSIIIWDPETGQQKGRPLSGHKKHINCLAWEPYHRDPECRKLASASGDGDCRIWDV 238
Query: 608 RTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLW 647
+ G+C+ H + + A+ G ++ T D V +W
Sbjct: 239 KLGQCLMNIAGHTNAVTAVRWGGAGLIY-TSSKDRTVKMW 277
Score = 121 (47.7 bits), Expect = 0.00057, P = 0.00057
Identities = 29/142 (20%), Positives = 61/142 (42%)
Query: 32 SFIACACGESINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLST 91
S ++C+ ++ + + + G + + + SPD KL+ S+ + +R+W S
Sbjct: 347 SLVSCSDDNTLYLWRNNQNKCVERMTGHQNVVNDVKYSPDVKLIASASFDKSVRLWRASD 406
Query: 92 LKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSIL 151
+ + +++GH +A L+ + D + VW V GH V +
Sbjct: 407 GQYMATFRGHVQAVYTVAWSADSRLIVSGSKDSTLKVWSVQTKKLAQELPGHADEVFGVD 466
Query: 152 FHPDTDKSLLFSGSDDATVRVW 173
+ PD + + SG D +++W
Sbjct: 467 WAPDGSR--VASGGKDKVIKLW 486
>UNIPROTKB|G4MNI3 [details] [associations]
symbol:MGG_05616 "Pre-mRNA-splicing factor prp46"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 EMBL:CM001231 KO:K12862 RefSeq:XP_003710501.1
ProteinModelPortal:G4MNI3 EnsemblFungi:MGG_05616T0 GeneID:2675862
KEGG:mgr:MGG_05616 Uniprot:G4MNI3
Length = 510
Score = 262 (97.3 bits), Expect = 4.3e-21, Sum P(2) = 4.3e-21
Identities = 62/192 (32%), Positives = 95/192 (49%)
Query: 25 LVVSSDGSFIACACGE-SINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSRE 83
L V D + A G+ +I I DL++ ++ T+ G T+ LA+SP LFS +
Sbjct: 207 LAVEPDNKWFASGAGDRTIKIWDLASGRLRLTLTGHISTVRGLAVSPRHPYLFSCAEDKM 266
Query: 84 IRVWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGH 143
++ WDL T K +R + GH +A HP+ +L T G D VWD+ H GH
Sbjct: 267 VKCWDLETNKVIRHYHGHLSGVYTLALHPTLDVLVTGGRDGVARVWDMRTRSNIHVLSGH 326
Query: 144 KGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTL 203
G VS ++ + D ++ +GS D+TVR+WDL A K + L H V ++A T
Sbjct: 327 TGTVSELVCQ-EADPQVI-TGSLDSTVRMWDLAAGKTMGVLTHHKKGVRALA-THPTEFT 383
Query: 204 ISAGRDKVVNLW 215
++G + W
Sbjct: 384 FASGSAGSIKQW 395
Score = 213 (80.0 bits), Expect = 1.6e-15, Sum P(2) = 1.6e-15
Identities = 46/162 (28%), Positives = 74/162 (45%)
Query: 56 IEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPSGG 115
I G + ALA+ PD+K S R I++WDL++ + + GH G+A P
Sbjct: 197 ISGHLGWVRALAVEPDNKWFASGAGDRTIKIWDLASGRLRLTLTGHISTVRGLAVSPRHP 256
Query: 116 LLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDL 175
L + D+ V WD++ ++ GH V ++ HP D +L +G D RVWD+
Sbjct: 257 YLFSCAEDKMVKCWDLETNKVIRHYHGHLSGVYTLALHPTLD--VLVTGGRDGVARVWDM 314
Query: 176 LAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDL 217
+ + L H V+ + +I+ D V +WDL
Sbjct: 315 RTRSNIHVLSGHTGTVSELVCQEADPQVITGSLDSTVRMWDL 356
Score = 202 (76.2 bits), Expect = 8.6e-13, P = 8.6e-13
Identities = 51/210 (24%), Positives = 90/210 (42%)
Query: 438 TGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDI 497
+GH+G V A+A + SG+ D TIK+W D A + L + H +
Sbjct: 198 SGHLGWVRALAVEPD-NKWFASGAGDRTIKIW------DLASGRLRL----TLTGHISTV 246
Query: 498 NSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGD 557
LAV+P + + ++D+ W L + + GH G++++ P V++T D
Sbjct: 247 RGLAVSPRHPYLFSCAEDKMVKCWDLETNKVIRHYHGHLSGVYTLALHPTLDVLVTGGRD 306
Query: 558 KTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYD 617
++W + S + GHT +V Q+++ D V++W + G+ +
Sbjct: 307 GVARVWDMRTRSNIHVLSGHTGTVSELVCQEADPQVITGSLDSTVRMWDLAAGKTMGVLT 366
Query: 618 KHEDKIWALAVGKKTEMFATGGSDALVNLW 647
H+ + ALA TE GS + W
Sbjct: 367 HHKKGVRALAT-HPTEFTFASGSAGSIKQW 395
Score = 180 (68.4 bits), Expect = 2.2e-10, P = 2.2e-10
Identities = 41/163 (25%), Positives = 72/163 (44%)
Query: 485 KAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEF 544
K V++ H + +LAV P++ +G+ DRT +W L +T GH + +
Sbjct: 192 KLMRVISGHLGWVRALAVEPDNKWFASGAGDRTIKIWDLASGRLRLTLTGHISTVRGLAV 251
Query: 545 SPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKL 604
SP + + + DK +K W + ++ + GH S V + +V+ G DG+ ++
Sbjct: 252 SPRHPYLFSCAEDKMVKCWDLETNKVIRHYHGHLSGVYTLALHPTLDVLVTGGRDGVARV 311
Query: 605 WTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLW 647
W +RT I H + L + TG D+ V +W
Sbjct: 312 WDMRTRSNIHVLSGHTGTVSELVCQEADPQVITGSLDSTVRMW 354
Score = 170 (64.9 bits), Expect = 2.8e-09, P = 2.8e-09
Identities = 71/307 (23%), Positives = 130/307 (42%)
Query: 309 AATVLPSNQGLLCVTADQQLLLYTTVEVPEKKMELILSKRLVGYNEEILDLKFLGEEEQY 368
A V P N+ D+ + ++ ++ ++ L L+ G+ + L + Y
Sbjct: 206 ALAVEPDNKWFASGAGDRTIKIW---DLASGRLRLTLT----GHISTVRGLA-VSPRHPY 257
Query: 369 LAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDS 428
L + V+ +DL + GH V T AL ++VTG +D R+WD
Sbjct: 258 LFSCAEDKMVKCWDLETNKVIRHYHGHLSGVY---TLALHPTLDVLVTGGRDGVARVWDM 314
Query: 429 ESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKA 488
+R + V +GH G V + ++ +++GS D T+++W D A K
Sbjct: 315 RTRSNIHVLSGHTGTVSELV-CQEADPQVITGSLDSTVRMW------DLAAG----KTMG 363
Query: 489 VVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVD 548
V+ H K + +LA P + +GS W+ P+ + F GH I ++ + D
Sbjct: 364 VLTHHKKGVRALATHPTEFTFASGSAGSIK-QWKCPEGAFMQNFEGHNSIINTLSVN--D 420
Query: 549 QVVITASGDK-TIKIWSISDGSCLKTFE-----GHT---SSVLRASFLTRGAQIVSCG-A 598
Q V + D ++ W G ++ + G S + ++F G++++ CG A
Sbjct: 421 QNVFFSGADNGSMSFWDWKTGHRFQSLDTTAQPGSLQAESGIFTSTFDQSGSRLI-CGEA 479
Query: 599 DGLVKLW 605
D +K+W
Sbjct: 480 DKTIKIW 486
Score = 165 (63.1 bits), Expect = 3.3e-10, Sum P(2) = 3.3e-10
Identities = 44/146 (30%), Positives = 64/146 (43%)
Query: 93 KCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILF 152
K +R GH G +A P A+ DR + +WD+ G GH V +
Sbjct: 192 KLMRVISGHLGWVRALAVEPDNKWFASGAGDRTIKIWDLASGRLRLTLTGHISTVRGLAV 251
Query: 153 HPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVV 212
P LFS ++D V+ WDL K + H S V ++A+ L++ GRD V
Sbjct: 252 SPR--HPYLFSCAEDKMVKCWDLETNKVIRHYHGHLSGVYTLALHPTLDVLVTGGRDGVA 309
Query: 213 NLWDLRDYSC--KLTVPTYEMVEAVC 236
+WD+R S L+ T + E VC
Sbjct: 310 RVWDMRTRSNIHVLSGHTGTVSELVC 335
Score = 139 (54.0 bits), Expect = 6.7e-06, P = 6.7e-06
Identities = 39/178 (21%), Positives = 74/178 (41%)
Query: 46 DLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPA 105
D+ S + G + T++ L D + + +R+WDL+ K + H
Sbjct: 313 DMRTRSNIHVLSGHTGTVSELVCQEADPQVITGSLDSTVRMWDLAAGKTMGVLTHHKKGV 372
Query: 106 IGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGS 165
+A HP+ A+ A + W G F+GH +++++ + D+++ FSG+
Sbjct: 373 RALATHPTEFTFASGSAG-SIKQWKCPEGAFMQNFEGHNSIINTLSVN---DQNVFFSGA 428
Query: 166 DDATVRVWDLLAKKCVATLD--------KHFSRVTSMAITSDGSTLISAGRDKVVNLW 215
D+ ++ WD +LD + S + + GS LI DK + +W
Sbjct: 429 DNGSMSFWDWKTGHRFQSLDTTAQPGSLQAESGIFTSTFDQSGSRLICGEADKTIKIW 486
Score = 60 (26.2 bits), Expect = 4.3e-21, Sum P(2) = 4.3e-21
Identities = 23/99 (23%), Positives = 46/99 (46%)
Query: 394 GHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSES--RCCVGVGTGHMGAVGAVA--F 449
GH+ I+ +T +++ + +G+ + S+ WD ++ R T G++ A + F
Sbjct: 408 GHNSII---NTLSVNDQNVFF-SGADNGSMSFWDWKTGHRFQSLDTTAQPGSLQAESGIF 463
Query: 450 SKKLQNF---LVSGSSDHTIKVWSFDGLSDDAEQPMNLK 485
+ L+ G +D TIK+W D + P++ K
Sbjct: 464 TSTFDQSGSRLICGEADKTIKIWKEDMEATPETHPLDWK 502
>UNIPROTKB|Q6PBD6 [details] [associations]
symbol:wdr61 "WD repeat-containing protein 61" species:8364
"Xenopus (Silurana) tropicalis" [GO:0005634 "nucleus" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0016593 "Cdc73/Paf1
complex" evidence=ISS] [GO:0032968 "positive regulation of
transcription elongation from RNA polymerase II promoter"
evidence=ISS] [GO:0035327 "transcriptionally active chromatin"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0051571
"positive regulation of histone H3-K4 methylation" evidence=ISS]
[GO:0055087 "Ski complex" evidence=ISS] [GO:0080182 "histone H3-K4
trimethylation" evidence=ISS] [GO:2001162 "positive regulation of
histone H3-K79 methylation" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327
GO:GO:0051571 GO:GO:0032968 GO:GO:0080182 GO:GO:0016593
GO:GO:2001162 GeneTree:ENSGT00700000104507 GO:GO:0055087 CTD:80349
HOGENOM:HOG000036765 HOVERGEN:HBG059813 KO:K12602 OMA:IATGSHH
OrthoDB:EOG4VMFFW EMBL:BC059759 RefSeq:NP_988871.1 UniGene:Str.5901
ProteinModelPortal:Q6PBD6 Ensembl:ENSXETT00000020997 GeneID:394466
KEGG:xtr:394466 Xenbase:XB-GENE-5751496 InParanoid:Q6PBD6
Bgee:Q6PBD6 Uniprot:Q6PBD6
Length = 305
Score = 257 (95.5 bits), Expect = 4.4e-21, P = 4.4e-21
Identities = 82/283 (28%), Positives = 137/283 (48%)
Query: 369 LAVATNIEQ-VQVYDLSS--MSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRL 425
L ++ +++ V+V+ S + L GH V+ +D SG I+ + S D +RL
Sbjct: 34 LVISGSLDDLVKVWKWSDERLELQSTLEGHQLGVVSVDVSP--SGNIM-ASSSLDAHIRL 90
Query: 426 WDSESRCCV-GVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNL 484
WD ES + + G + A +VAFS Q+ L +GS H KV F G+ + ++ +L
Sbjct: 91 WDLESGKQIRAIDAGPVDA-WSVAFSPDSQH-LATGS--HVGKVNIF-GV-ETGKKEYSL 144
Query: 485 KAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEF 544
+ GK I S+A +P+ + +G+ D ++ + + T GH I S+ F
Sbjct: 145 DTR------GKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTF 198
Query: 545 SPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKL 604
SP Q+++TAS D IKI+ + S T GH S VL +F VS +D VK+
Sbjct: 199 SPDSQLLVTASDDGYIKIYEVQHASLAATLSGHGSWVLNVAFSPDDTHFVSSSSDKSVKV 258
Query: 605 WTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLW 647
W V C+ T+ H+D++W + K + D ++++
Sbjct: 259 WDVSARTCVHTFLDHQDQVWGVKYNKNGSKIVSVADDQEIHVY 301
Score = 212 (79.7 bits), Expect = 5.2e-15, P = 5.2e-15
Identities = 50/175 (28%), Positives = 86/175 (49%)
Query: 42 INIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGH 101
+NI + + +++ I ++A SPD K L S I ++D++T K L + +GH
Sbjct: 130 VNIFGVETGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGH 189
Query: 102 DGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLL 161
P + P LL TA D + +++V GH V ++ F PD D +
Sbjct: 190 AMPIRSLTFSPDSQLLVTASDDGYIKIYEVQHASLAATLSGHGSWVLNVAFSPD-DTHFV 248
Query: 162 FSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWD 216
S S D +V+VWD+ A+ CV T H +V + +GS ++S D+ ++++D
Sbjct: 249 -SSSSDKSVKVWDVSARTCVHTFLDHQDQVWGVKYNKNGSKIVSVADDQEIHVYD 302
Score = 210 (79.0 bits), Expect = 1.0e-14, P = 1.0e-14
Identities = 53/197 (26%), Positives = 97/197 (49%)
Query: 27 VSSDGSFIACACGES-INIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIR 85
VS G+ +A + ++ I + DL + I+ G ++A SPD + L + H ++
Sbjct: 72 VSPSGNIMASSSLDAHIRLWDLESGKQIRAIDAGPVDAWSVAFSPDSQHLATGSHVGKVN 131
Query: 86 VWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKG 145
++ + T K S + +A P G LA+ D + ++D+ G H +GH
Sbjct: 132 IFGVETGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAM 191
Query: 146 VVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLIS 205
+ S+ F PD+ LL + SDD ++++++ ATL H S V ++A + D + +S
Sbjct: 192 PIRSLTFSPDSQ--LLVTASDDGYIKIYEVQHASLAATLSGHGSWVLNVAFSPDDTHFVS 249
Query: 206 AGRDKVVNLWDLRDYSC 222
+ DK V +WD+ +C
Sbjct: 250 SSSDKSVKVWDVSARTC 266
Score = 182 (69.1 bits), Expect = 3.0e-11, P = 3.0e-11
Identities = 40/151 (26%), Positives = 74/151 (49%)
Query: 25 LVVSSDGSFIACACGESI-NIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSRE 83
+ S DG ++A + I NI D++ + T+EG + I +L SPD +LL ++
Sbjct: 154 IAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGY 213
Query: 84 IRVWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGH 143
I+++++ + GH + +A P ++ +D+ V VWDV C H F H
Sbjct: 214 IKIYEVQHASLAATLSGHGSWVLNVAFSPDDTHFVSSSSDKSVKVWDVSARTCVHTFLDH 273
Query: 144 KGVVSSILFHPDTDKSLLFSGSDDATVRVWD 174
+ V + ++ + K + S +DD + V+D
Sbjct: 274 QDQVWGVKYNKNGSK--IVSVADDQEIHVYD 302
Score = 181 (68.8 bits), Expect = 3.8e-11, P = 3.8e-11
Identities = 57/234 (24%), Positives = 109/234 (46%)
Query: 28 SSDGS--FIACACGESINIVDLSNA--SIKSTIEGGSDTITALALSPDDKLLFSSGHSRE 83
S+DGS I+ + + + + S+ ++ST+EG + ++ +SP ++ SS
Sbjct: 28 SNDGSELVISGSLDDLVKVWKWSDERLELQSTLEGHQLGVVSVDVSPSGNIMASSSLDAH 87
Query: 84 IRVWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGH 143
IR+WDL + K +R+ A +A P LAT KV ++ V+ G +
Sbjct: 88 IRLWDLESGKQIRAIDAGPVDAWSVAFSPDSQHLATGSHVGKVNIFGVETGKKEYSLDTR 147
Query: 144 KGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTL 203
+ SI + PD L SG+ D + ++D+ K + TL+ H + S+ + D L
Sbjct: 148 GKFILSIAYSPDG--KYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLL 205
Query: 204 ISAGRDKVVNLWDLRDYSCKLTVPTYEMVEAVCAIPPGSAFDSFLSSYNQQTIK 257
++A D + +++++ S T+ + A P F+SS + +++K
Sbjct: 206 VTASDDGYIKIYEVQHASLAATLSGHGSWVLNVAFSPDDTH--FVSSSSDKSVK 257
Score = 141 (54.7 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 40/152 (26%), Positives = 74/152 (48%)
Query: 505 NDS--LVCTGSQDRTACVWRLPD--LVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTI 560
ND LV +GS D VW+ D L T GH+ G+ SV+ SP ++ ++S D I
Sbjct: 29 NDGSELVISGSLDDLVKVWKWSDERLELQSTLEGHQLGVVSVDVSPSGNIMASSSLDAHI 88
Query: 561 KIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGAD-GLVKLWTVRTGECIATYDKH 619
++W + G ++ + +F + +Q ++ G+ G V ++ V TG+ + D
Sbjct: 89 RLWDLESGKQIRAIDAGPVDAWSVAF-SPDSQHLATGSHVGKVNIFGVETGKKEYSLDTR 147
Query: 620 EDKIWALAVGKKTEMFATGGSDALVNLWHDST 651
I ++A + A+G D ++N++ +T
Sbjct: 148 GKFILSIAYSPDGKYLASGAIDGIINIFDIAT 179
Score = 131 (51.2 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 69/287 (24%), Positives = 120/287 (41%)
Query: 197 TSDGSTLISAGR-DKVVNLWDLRDYSCKL--TVPTYEM-VEAVCAIPPGSAFDSFLSSYN 252
++DGS L+ +G D +V +W D +L T+ +++ V +V P G+ S SS +
Sbjct: 28 SNDGSELVISGSLDDLVKVWKWSDERLELQSTLEGHQLGVVSVDVSPSGNIMAS--SSLD 85
Query: 253 QQT-IKKKRRSLEIHFITVGERGIVRMWNA----DSACLYEQKSSDVTISFEMDDSKRGF 307
+ +I I G V W+ DS L F ++ K+ +
Sbjct: 86 AHIRLWDLESGKQIRAIDAGP---VDAWSVAFSPDSQHLATGSHVGKVNIFGVETGKKEY 142
Query: 308 TAATVLPSNQGLLCV--TADQQLLLYTTVEVPEKKMELILSK---RLVGYNEEILDLKFL 362
+ T + +L + + D + L ++ ++ K L G+ I L F
Sbjct: 143 SLDT---RGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTF- 198
Query: 363 GEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNS 422
+ Q L A++ +++Y++ S + L+GH VL A S V+ S D S
Sbjct: 199 SPDSQLLVTASDDGYIKIYEVQHASLAATLSGHGSWVL---NVAFSPDDTHFVSSSSDKS 255
Query: 423 VRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVW 469
V++WD +R CV H V V ++K +VS + D I V+
Sbjct: 256 VKVWDVSARTCVHTFLDHQDQVWGVKYNKNGSK-IVSVADDQEIHVY 301
Score = 128 (50.1 bits), Expect = 4.1e-05, P = 4.1e-05
Identities = 33/119 (27%), Positives = 54/119 (45%)
Query: 535 HKRGIWSVEF----SPVDQVVITASGDKTIKIWSISDG--SCLKTFEGHTSSVLRASFLT 588
H+ IWSV + + ++VI+ S D +K+W SD T EGH V+
Sbjct: 15 HEDAIWSVGWGKNSNDGSELVISGSLDDLVKVWKWSDERLELQSTLEGHQLGVVSVDVSP 74
Query: 589 RGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLW 647
G + S D ++LW + +G+ I D W++A ++ ATG VN++
Sbjct: 75 SGNIMASSSLDAHIRLWDLESGKQIRAIDAGPVDAWSVAFSPDSQHLATGSHVGKVNIF 133
>UNIPROTKB|A8X8C6 [details] [associations]
symbol:tag-125 "WD repeat-containing protein tag-125"
species:6238 "Caenorhabditis briggsae" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
KO:K14963 HOGENOM:HOG000091642 EMBL:HE601123 RefSeq:XP_002641984.1
ProteinModelPortal:A8X8C6 SMR:A8X8C6 EnsemblMetazoa:CBG09206
GeneID:8583978 KEGG:cbr:CBG09206 CTD:8583978 WormBase:CBG09206
OMA:KLWKSDT Uniprot:A8X8C6
Length = 368
Score = 265 (98.3 bits), Expect = 4.9e-21, P = 4.9e-21
Identities = 52/163 (31%), Positives = 86/163 (52%)
Query: 485 KAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEF 544
K + + H K I+++ +P + T S D+T +W + DL T GHK G+ +
Sbjct: 70 KLISTIEGHTKSISAVKFSPCGKFLGTSSADKTVKIWNMSDLSCERTLTGHKLGVNDFAW 129
Query: 545 SPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKL 604
S + ++TAS DKT+KI+ + KT +GHT+ V +F + + +VS D V++
Sbjct: 130 SADSKSIVTASDDKTLKIYEVPTVKMAKTLKGHTNYVFCCNFNPQSSLVVSGSFDESVRI 189
Query: 605 WTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLW 647
W VRTG C+ T H D + A++ + + +G D LV +W
Sbjct: 190 WDVRTGMCVKTLPAHSDPVSAVSFNRDGSLITSGSYDGLVRIW 232
Score = 264 (98.0 bits), Expect = 7.8e-21, P = 7.8e-21
Identities = 57/210 (27%), Positives = 100/210 (47%)
Query: 439 GHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDIN 498
GH ++ AV FS FL + S+D T+K+W+ +SD L + + H +N
Sbjct: 77 GHTKSISAVKFSP-CGKFLGTSSADKTVKIWN---MSD-------LSCERTLTGHKLGVN 125
Query: 499 SLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDK 558
A + + + T S D+T ++ +P + T +GH ++ F+P +V++ S D+
Sbjct: 126 DFAWSADSKSIVTASDDKTLKIYEVPTVKMAKTLKGHTNYVFCCNFNPQSSLVVSGSFDE 185
Query: 559 TIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATY-D 617
+++IW + G C+KT H+ V SF G+ I S DGLV++W G+C+ T D
Sbjct: 186 SVRIWDVRTGMCVKTLPAHSDPVSAVSFNRDGSLITSGSYDGLVRIWDTANGQCVKTLVD 245
Query: 618 KHEDKIWALAVGKKTEMFATGGSDALVNLW 647
+ + + + D + LW
Sbjct: 246 DENPPVAFVKFSPNGKYILSSNLDNTLKLW 275
Score = 253 (94.1 bits), Expect = 3.0e-19, P = 3.0e-19
Identities = 64/205 (31%), Positives = 98/205 (47%)
Query: 54 STIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPS 113
STIEG + +I+A+ SP K L +S + +++W++S L C R+ GH A
Sbjct: 73 STIEGHTKSISAVKFSPCGKFLGTSSADKTVKIWNMSDLSCERTLTGHKLGVNDFAWSAD 132
Query: 114 GGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVW 173
+ TA D+ + +++V KGH V F+P + SL+ SGS D +VR+W
Sbjct: 133 SKSIVTASDDKTLKIYEVPTVKMAKTLKGHTNYVFCCNFNPQS--SLVVSGSFDESVRIW 190
Query: 174 DLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSC-KLTVPTYEMV 232
D+ CV TL H V++++ DGS + S D +V +WD + C K V
Sbjct: 191 DVRTGMCVKTLPAHSDPVSAVSFNRDGSLITSGSYDGLVRIWDTANGQCVKTLVDDENPP 250
Query: 233 EAVCAIPPGSAFDSFLSSYNQQTIK 257
A P + LSS T+K
Sbjct: 251 VAFVKFSPNGKY--ILSSNLDNTLK 273
Score = 237 (88.5 bits), Expect = 2.9e-17, P = 2.9e-17
Identities = 52/188 (27%), Positives = 93/188 (49%)
Query: 31 GSFIACACGE-SINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWDL 89
G F+ + + ++ I ++S+ S + T+ G + A S D K + ++ + ++++++
Sbjct: 91 GKFLGTSSADKTVKIWNMSDLSCERTLTGHKLGVNDFAWSADSKSIVTASDDKTLKIYEV 150
Query: 90 STLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSS 149
T+K ++ KGH +P L+ + D V +WDV G C H VS+
Sbjct: 151 PTVKMAKTLKGHTNYVFCCNFNPQSSLVVSGSFDESVRIWDVRTGMCVKTLPAHSDPVSA 210
Query: 150 ILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATL-DKHFSRVTSMAITSDGSTLISAGR 208
+ F+ D SL+ SGS D VR+WD +CV TL D V + + +G ++S+
Sbjct: 211 VSFN--RDGSLITSGSYDGLVRIWDTANGQCVKTLVDDENPPVAFVKFSPNGKYILSSNL 268
Query: 209 DKVVNLWD 216
D + LWD
Sbjct: 269 DNTLKLWD 276
Score = 232 (86.7 bits), Expect = 1.2e-16, P = 1.2e-16
Identities = 63/270 (23%), Positives = 128/270 (47%)
Query: 342 ELILSKRLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLC 401
+L + L G+ + D + + + + A++ + +++Y++ ++ + L GH+ V C
Sbjct: 110 DLSCERTLTGHKLGVNDFAWSADSKS-IVTASDDKTLKIYEVPTVKMAKTLKGHTNYVFC 168
Query: 402 LDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGS 461
C + L+V+GS D SVR+WD + CV H V AV+F++ + + SGS
Sbjct: 169 ---CNFNPQSSLVVSGSFDESVRIWDVRTGMCVKTLPAHSDPVSAVSFNRD-GSLITSGS 224
Query: 462 SDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVW 521
D +++W D A K +V + + +PN + + + D T +W
Sbjct: 225 YDGLVRIW------DTANGQC---VKTLVDDENPPVAFVKFSPNGKYILSSNLDNTLKLW 275
Query: 522 RLPDLVSVVTFRGHKRGIWSV--EFSPVD-QVVITASGDKTIKIWSISDGSCLKTFEGHT 578
++ ++GH+ + + FS + +I+ S D I +W++ +++ EGHT
Sbjct: 276 DFGKGKTLKQYQGHENNKYCIFANFSVTGGKWIISGSEDCKIYVWNLQTKEVVQSLEGHT 335
Query: 579 SSVLRASFLTRGAQIVSCGA---DGLVKLW 605
+V+ AS +++ GA D +++W
Sbjct: 336 QAVI-ASDCHPMQNMIASGALEPDNTIRIW 364
Score = 220 (82.5 bits), Expect = 2.9e-15, P = 2.9e-15
Identities = 62/246 (25%), Positives = 106/246 (43%)
Query: 410 GKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVW 469
GK L T S D +V++W+ C TGH V A+S ++ +V+ S D T+K++
Sbjct: 91 GKFL-GTSSADKTVKIWNMSDLSCERTLTGHKLGVNDFAWSADSKS-IVTASDDKTLKIY 148
Query: 470 SFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSV 529
E P +K + H + P SLV +GS D + +W + + V
Sbjct: 149 ---------EVP-TVKMAKTLKGHTNYVFCCNFNPQSSLVVSGSFDESVRIWDVRTGMCV 198
Query: 530 VTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTF-EGHTSSVLRASFLT 588
T H + +V F+ ++ + S D ++IW ++G C+KT + V F
Sbjct: 199 KTLPAHSDPVSAVSFNRDGSLITSGSYDGLVRIWDTANGQCVKTLVDDENPPVAFVKFSP 258
Query: 589 RGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKT---EMFATGGSDALVN 645
G I+S D +KLW G+ + Y HE+ + + + +G D +
Sbjct: 259 NGKYILSSNLDNTLKLWDFGKGKTLKQYQGHENNKYCIFANFSVTGGKWIISGSEDCKIY 318
Query: 646 LWHDST 651
+W+ T
Sbjct: 319 VWNLQT 324
Score = 184 (69.8 bits), Expect = 3.7e-11, P = 3.7e-11
Identities = 52/199 (26%), Positives = 93/199 (46%)
Query: 25 LVVSSDGSFIACACGESINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREI 84
LVVS GSF ES+ I D+ T+ SD ++A++ + D L+ S + +
Sbjct: 177 LVVS--GSF-----DESVRIWDVRTGMCVKTLPAHSDPVSAVSFNRDGSLITSGSYDGLV 229
Query: 85 RVWDLSTLKCLRSWKGHDGPAIGMA-CHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGH 143
R+WD + +C+++ + P + P+G + ++ D + +WD G ++GH
Sbjct: 230 RIWDTANGQCVKTLVDDENPPVAFVKFSPNGKYILSSNLDNTLKLWDFGKGKTLKQYQGH 289
Query: 144 KGVVSSILFHPD-TDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDG-- 200
+ I + T + SGS+D + VW+L K+ V +L+ H T I SD
Sbjct: 290 ENNKYCIFANFSVTGGKWIISGSEDCKIYVWNLQTKEVVQSLEGH----TQAVIASDCHP 345
Query: 201 -STLISAGR---DKVVNLW 215
+I++G D + +W
Sbjct: 346 MQNMIASGALEPDNTIRIW 364
Score = 173 (66.0 bits), Expect = 6.3e-10, P = 6.3e-10
Identities = 46/161 (28%), Positives = 77/161 (47%)
Query: 93 KCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILF 152
K + + +GH + P G L T+ AD+ V +W++ C GHK V+ +
Sbjct: 70 KLISTIEGHTKSISAVKFSPCGKFLGTSSADKTVKIWNMSDLSCERTLTGHKLGVNDFAW 129
Query: 153 HPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVV 212
D+ KS++ + SDD T++++++ K TL H + V S ++S D+ V
Sbjct: 130 SADS-KSIV-TASDDKTLKIYEVPTVKMAKTLKGHTNYVFCCNFNPQSSLVVSGSFDESV 187
Query: 213 NLWDLRDYSCKLTVPTY-EMVEAVCAIPPGSAFDSFLSSYN 252
+WD+R C T+P + + V AV GS S SY+
Sbjct: 188 RIWDVRTGMCVKTLPAHSDPVSAVSFNRDGSLITS--GSYD 226
Score = 143 (55.4 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 64/310 (20%), Positives = 145/310 (46%)
Query: 179 KCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYEMVEAVCAI 238
K ++T++ H ++++ + G L ++ DK V +W++ D SC+ T+ +++ V
Sbjct: 70 KLISTIEGHTKSISAVKFSPCGKFLGTSSADKTVKIWNMSDLSCERTLTGHKL--GVNDF 127
Query: 239 PPGSAFDSFLSSYNQQTIKKKRRSLEIHFITVGERGIVRMWNADSACLYEQKSSDVTISF 298
+ S +++ + +T+K E+ + + + + N C + +SS + +S
Sbjct: 128 AWSADSKSIVTASDDKTLK----IYEVPTVKMAKT-LKGHTNYVFCCNFNPQSS-LVVSG 181
Query: 299 EMDDSKRGFTAAT-----VLPSNQG-LLCVTADQQLLLYTT------VEVPEKKMELILS 346
D+S R + T LP++ + V+ ++ L T+ V + + +
Sbjct: 182 SFDESVRIWDVRTGMCVKTLPAHSDPVSAVSFNRDGSLITSGSYDGLVRIWDTANGQCVK 241
Query: 347 KRLVGYNEEILDLKFLGEEEQYLAVATNIEQ-VQVYDLSSMSCSYVLAGHSEIVLCL-DT 404
+ N + +KF +Y+ +++N++ ++++D GH C+
Sbjct: 242 TLVDDENPPVAFVKF-SPNGKYI-LSSNLDNTLKLWDFGKGKTLKQYQGHENNKYCIFAN 299
Query: 405 CALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGS--S 462
+++ GK I++GS+D + +W+ +++ V GH AV A + +QN + SG+
Sbjct: 300 FSVTGGK-WIISGSEDCKIYVWNLQTKEVVQSLEGHTQAVIA-SDCHPMQNMIASGALEP 357
Query: 463 DHTIKVWSFD 472
D+TI++W D
Sbjct: 358 DNTIRIWRSD 367
Score = 128 (50.1 bits), Expect = 6.1e-05, P = 6.1e-05
Identities = 61/305 (20%), Positives = 128/305 (41%)
Query: 141 KGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDG 200
+GH +S++ F P K L + S D TV++W++ C TL H V A ++D
Sbjct: 76 EGHTKSISAVKFSP-CGK-FLGTSSADKTVKIWNMSDLSCERTLTGHKLGVNDFAWSADS 133
Query: 201 STLISAGRDKVVNLWDLRDYSCKLTVPTYEMVEAVCAIPPGSA------FDSFLSSYNQQ 254
++++A DK + ++++ T+ + C P S+ FD + ++ +
Sbjct: 134 KSIVTASDDKTLKIYEVPTVKMAKTLKGHTNYVFCCNFNPQSSLVVSGSFDESVRIWDVR 193
Query: 255 T---IKK-KRRSLEIHFITVGERG-IVRMWNADSACLYEQKSSDVTISFEMDDSKRGFTA 309
T +K S + ++ G ++ + D ++ + +DD
Sbjct: 194 TGMCVKTLPAHSDPVSAVSFNRDGSLITSGSYDGLVRIWDTANGQCVKTLVDDENPPVAF 253
Query: 310 ATVLPSNQGLLCVTADQQLLLYTTVEVPEKKMELILSKRLVGY--NEEILDLKFLGEEEQ 367
P+ + +L D L L+ K L K+ G+ N+ + F +
Sbjct: 254 VKFSPNGKYILSSNLDNTLKLWDF----GKGKTL---KQYQGHENNKYCIFANFSVTGGK 306
Query: 368 YLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGS--KDNSVRL 425
++ + ++ V++L + L GH++ V+ D + + +I +G+ DN++R+
Sbjct: 307 WIISGSEDCKIYVWNLQTKEVVQSLEGHTQAVIASDCHPMQN---MIASGALEPDNTIRI 363
Query: 426 WDSES 430
W S+S
Sbjct: 364 WRSDS 368
>DICTYBASE|DDB_G0275045 [details] [associations]
symbol:gpbB "Guanine nucleotide-binding protein
subunit beta-like protein" species:44689 "Dictyostelium discoideum"
[GO:0045335 "phagocytic vesicle" evidence=IDA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0275045 GO:GO:0045335
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CM000151_GR EMBL:AAFI02000013 KO:K14753 OMA:IRVWQVM
EMBL:U27537 RefSeq:XP_643839.1 ProteinModelPortal:P46800 SMR:P46800
IntAct:P46800 STRING:P46800 SWISS-2DPAGE:P46800 PRIDE:P46800
EnsemblProtists:DDB0185122 GeneID:8619886 KEGG:ddi:DDB_G0275045
Uniprot:P46800
Length = 329
Score = 256 (95.2 bits), Expect = 5.7e-21, P = 5.7e-21
Identities = 66/221 (29%), Positives = 102/221 (46%)
Query: 434 VGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAH 493
VG GH G V ++A S + + ++S S D T+ VW DA P KA + H
Sbjct: 14 VGSLVGHNGFVTSIAVSPENPDTIISSSRDKTVMVWQLT--PTDATSPG--KAHRSLKGH 69
Query: 494 GKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVIT 553
+ + ++ + +GS D T +W + VS F+GH + + SV FS ++ +I+
Sbjct: 70 SHFVQDVVISHDGQFALSGSWDNTLRLWDITKGVSTRLFKGHTQDVMSVAFSSDNRQIIS 129
Query: 554 ASGDKTIKIWSISDGSCLKTFEG---HTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTG 610
S D TIK+W+ G C T EG H V F IVS D VK+W +++
Sbjct: 130 GSRDATIKVWNTL-GECKFTLEGPEAHQDWVSCIRFSPNTPTIVSGSWDNKVKIWDIKSF 188
Query: 611 ECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLWHDST 651
+C T H + + + + A+GG D LW S+
Sbjct: 189 KCNHTLTDHTGYVNTVTISPDGSLCASGGKDTFACLWELSS 229
Score = 223 (83.6 bits), Expect = 5.2e-16, P = 5.2e-16
Identities = 57/199 (28%), Positives = 95/199 (47%)
Query: 55 TIEGGSDTITALALSPDDK-LLFSSGHSREIRVWDLSTL------KCLRSWKGHDGPAIG 107
++ G + +T++A+SP++ + SS + + VW L+ K RS KGH
Sbjct: 16 SLVGHNGFVTSIAVSPENPDTIISSSRDKTVMVWQLTPTDATSPGKAHRSLKGHSHFVQD 75
Query: 108 MACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDD 167
+ G + D + +WD+ G T FKGH V S+ F +D + SGS D
Sbjct: 76 VVISHDGQFALSGSWDNTLRLWDITKGVSTRLFKGHTQDVMSVAF--SSDNRQIISGSRD 133
Query: 168 ATVRVWDLLAKKCVATLD---KHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKL 224
AT++VW+ L + C TL+ H V+ + + + T++S D V +WD++ + C
Sbjct: 134 ATIKVWNTLGE-CKFTLEGPEAHQDWVSCIRFSPNTPTIVSGSWDNKVKIWDIKSFKCNH 192
Query: 225 TVPTYE-MVEAVCAIPPGS 242
T+ + V V P GS
Sbjct: 193 TLTDHTGYVNTVTISPDGS 211
Score = 209 (78.6 bits), Expect = 2.9e-14, P = 2.9e-14
Identities = 53/180 (29%), Positives = 87/180 (48%)
Query: 478 AEQPMNLKAKAVVAAHGKDINSLAVAP-NDSLVCTGSQDRTACVWRL-P-DLVSVV---- 530
A Q L+ ++V H + S+AV+P N + + S+D+T VW+L P D S
Sbjct: 6 APQVTYLEVGSLVG-HNGFVTSIAVSPENPDTIISSSRDKTVMVWQLTPTDATSPGKAHR 64
Query: 531 TFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRG 590
+ +GH + V S Q ++ S D T+++W I+ G + F+GHT V+ +F +
Sbjct: 65 SLKGHSHFVQDVVISHDGQFALSGSWDNTLRLWDITKGVSTRLFKGHTQDVMSVAFSSDN 124
Query: 591 AQIVSCGADGLVKLWTVRTGECIATYD---KHEDKIWALAVGKKTEMFATGGSDALVNLW 647
QI+S D +K+W GEC T + H+D + + T +G D V +W
Sbjct: 125 RQIISGSRDATIKVWNT-LGECKFTLEGPEAHQDWVSCIRFSPNTPTIVSGSWDNKVKIW 183
Score = 202 (76.2 bits), Expect = 2.0e-13, P = 2.0e-13
Identities = 49/166 (29%), Positives = 80/166 (48%)
Query: 55 TIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPSG 114
+++G S + + +S D + S +R+WD++ R +KGH + +A
Sbjct: 65 SLKGHSHFVQDVVISHDGQFALSGSWDNTLRLWDITKGVSTRLFKGHTQDVMSVAFSSDN 124
Query: 115 GLLATAGADRKVLVWDVDGGFCTHYFKG---HKGVVSSILFHPDTDKSLLFSGSDDATVR 171
+ + D + VW+ G C +G H+ VS I F P+T + SGS D V+
Sbjct: 125 RQIISGSRDATIKVWNTLGE-CKFTLEGPEAHQDWVSCIRFSPNTPT--IVSGSWDNKVK 181
Query: 172 VWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDL 217
+WD+ + KC TL H V ++ I+ DGS S G+D LW+L
Sbjct: 182 IWDIKSFKCNHTLTDHTGYVNTVTISPDGSLCASGGKDTFACLWEL 227
Score = 189 (71.6 bits), Expect = 6.5e-12, P = 6.5e-12
Identities = 49/198 (24%), Positives = 98/198 (49%)
Query: 25 LVVSSDGSF-IACACGESINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSRE 83
+V+S DG F ++ + ++ + D++ +G + + ++A S D++ + S
Sbjct: 76 VVISHDGQFALSGSWDNTLRLWDITKGVSTRLFKGHTQDVMSVAFSSDNRQIISGSRDAT 135
Query: 84 IRVWDLSTL-KCLRSWKGHDGPAIGMAC---HPSGGLLATAGADRKVLVWDVDGGFCTHY 139
I+VW+ TL +C + +G + ++C P+ + + D KV +WD+ C H
Sbjct: 136 IKVWN--TLGECKFTLEGPEAHQDWVSCIRFSPNTPTIVSGSWDNKVKIWDIKSFKCNHT 193
Query: 140 FKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSD 199
H G V+++ PD SL SG D +W+L + K + L+ + + ++A + +
Sbjct: 194 LTDHTGYVNTVTISPDG--SLCASGGKDTFACLWELSSGKPLYKLEAR-NTINALAFSPN 250
Query: 200 GSTLISAGRDKVVNLWDL 217
L +A DK++ +WDL
Sbjct: 251 KYWLSAATDDKII-IWDL 267
Score = 186 (70.5 bits), Expect = 1.4e-11, P = 1.4e-11
Identities = 63/265 (23%), Positives = 111/265 (41%)
Query: 392 LAGHSEIVLCLDTCALS-SGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFS 450
L GH+ V + A+S I++ S+D +V +W G H G F
Sbjct: 17 LVGHNGFVTSI---AVSPENPDTIISSSRDKTVMVWQLTPTDATSPGKAHRSLKGHSHFV 73
Query: 451 KKLQ-----NFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPN 505
+ + F +SGS D+T+++W D + ++ + + H +D+ S+A + +
Sbjct: 74 QDVVISHDGQFALSGSWDNTLRLW-------DITKGVSTR---LFKGHTQDVMSVAFSSD 123
Query: 506 DSLVCTGSQDRTACVWRLPDLVSVVTFRG---HKRGIWSVEFSPVDQVVITASGDKTIKI 562
+ + +GS+D T VW T G H+ + + FSP +++ S D +KI
Sbjct: 124 NRQIISGSRDATIKVWNTLGECKF-TLEGPEAHQDWVSCIRFSPNTPTIVSGSWDNKVKI 182
Query: 563 WSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDK 622
W I C T HT V + G+ S G D LW + +G+ + + +
Sbjct: 183 WDIKSFKCNHTLTDHTGYVNTVTISPDGSLCASGGKDTFACLWELSSGKPLYKLEAR-NT 241
Query: 623 IWALAVGKKTEMFATGGSDALVNLW 647
I ALA + D ++ +W
Sbjct: 242 INALAFSPNKYWLSAATDDKII-IW 265
Score = 159 (61.0 bits), Expect = 1.7e-08, P = 1.7e-08
Identities = 34/135 (25%), Positives = 67/135 (49%)
Query: 53 KSTIEGGS---DTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMA 109
K T+EG D ++ + SP+ + S ++++WD+ + KC + H G +
Sbjct: 146 KFTLEGPEAHQDWVSCIRFSPNTPTIVSGSWDNKVKIWDIKSFKCNHTLTDHTGYVNTVT 205
Query: 110 CHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDAT 169
P G L A+ G D +W++ G + + + ++++ F P+ K L + +DD
Sbjct: 206 ISPDGSLCASGGKDTFACLWELSSGKPLYKLEA-RNTINALAFSPN--KYWLSAATDDKI 262
Query: 170 VRVWDLLAKKCVATL 184
+ +WDLL K+ +A +
Sbjct: 263 I-IWDLLTKQVLAEI 276
Score = 129 (50.5 bits), Expect = 3.8e-05, P = 3.8e-05
Identities = 49/184 (26%), Positives = 84/184 (45%)
Query: 345 LSKRLV-GYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAG---HSEIVL 400
+S RL G+ ++++ + F + Q ++ + + ++V++ C + L G H + V
Sbjct: 103 VSTRLFKGHTQDVMSVAFSSDNRQIISGSRDAT-IKVWNTLG-ECKFTLEGPEAHQDWVS 160
Query: 401 CLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSG 460
C+ S IV+GS DN V++WD +S C T H G V V S + SG
Sbjct: 161 CI---RFSPNTPTIVSGSWDNKVKIWDIKSFKCNHTLTDHTGYVNTVTISPD-GSLCASG 216
Query: 461 SSDHTIKVWSFDGLSDDAEQPM-NLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTAC 519
D +W LS +P+ L+A+ IN+LA +PN + + D+
Sbjct: 217 GKDTFACLWE---LSSG--KPLYKLEAR-------NTINALAFSPNKYWLSAATDDKII- 263
Query: 520 VWRL 523
+W L
Sbjct: 264 IWDL 267
>UNIPROTKB|Q2KID6 [details] [associations]
symbol:PLRG1 "Pleiotropic regulator 1" species:9913 "Bos
taurus" [GO:0016607 "nuclear speck" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IEA] [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0008380 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016607 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006397 GO:GO:0071013 EMBL:BC112677
IPI:IPI00704198 RefSeq:NP_001039827.1 UniGene:Bt.74313
ProteinModelPortal:Q2KID6 STRING:Q2KID6 PRIDE:Q2KID6
Ensembl:ENSBTAT00000029844 GeneID:533951 KEGG:bta:533951 CTD:5356
GeneTree:ENSGT00700000104496 HOGENOM:HOG000207595
HOVERGEN:HBG053621 InParanoid:Q2KID6 KO:K12862 OMA:ITAEADK
OrthoDB:EOG4M65HB NextBio:20876207 Uniprot:Q2KID6
Length = 513
Score = 240 (89.5 bits), Expect = 5.9e-21, Sum P(2) = 5.9e-21
Identities = 53/189 (28%), Positives = 87/189 (46%)
Query: 33 FIACACGESINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTL 92
F+ + +I I DL++ +K ++ G T+ + +S LFS G ++++ WDL
Sbjct: 218 FVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVIVSTRSPYLFSCGEDKQVKCWDLEYN 277
Query: 93 KCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILF 152
K +R + GH G+ HP+ +L T D +WDV H GH V+++
Sbjct: 278 KVIRHYHGHLSAVYGLDLHPTIDVLVTCSRDSTARIWDVRTKASVHTLSGHTNAVATV-- 335
Query: 153 HPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVV 212
+ + +GS D T+R+WDL+A K TL H V ++ + T S D +
Sbjct: 336 RCQAAEPQIITGSHDTTIRLWDLVAGKTRVTLTNHKKSVRAVVLHPRHYTFASGSPDNIK 395
Query: 213 NLWDLRDYS 221
W D S
Sbjct: 396 Q-WKFPDGS 403
Score = 219 (82.2 bits), Expect = 1.2e-14, P = 1.2e-14
Identities = 73/259 (28%), Positives = 108/259 (41%)
Query: 391 VLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFS 450
V++GH V C+ A+ G VTGS D ++++WD S TGH+ V V S
Sbjct: 198 VISGHLGWVRCI---AVEPGNQWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVIVS 254
Query: 451 KKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHG--KDINSLAVAPNDSL 508
+ +L S D +K W D E N K + HG + L + P +
Sbjct: 255 TR-SPYLFSCGEDKQVKCW-------DLEY--N---KVIRHYHGHLSAVYGLDLHPTIDV 301
Query: 509 VCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDG 568
+ T S+D TA +W + SV T GH + +V + +IT S D TI++W + G
Sbjct: 302 LVTCSRDSTARIWDVRTKASVHTLSGHTNAVATVRCQAAEPQIITGSHDTTIRLWDLVAG 361
Query: 569 SCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAV 628
T H SV RA L + G+ +K W G I H I L V
Sbjct: 362 KTRVTLTNHKKSV-RAVVLHPRHYTFASGSPDNIKQWKFPDGSFIQNLSGHNAIINTLTV 420
Query: 629 GKKTEMFATGGSDALVNLW 647
+ +G + ++LW
Sbjct: 421 NSDG-VLVSGADNGTMHLW 438
Score = 213 (80.0 bits), Expect = 6.6e-18, Sum P(2) = 6.6e-18
Identities = 52/192 (27%), Positives = 88/192 (45%)
Query: 56 IEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPSGG 115
I G + +A+ P ++ + R I++WDL++ K S GH G+
Sbjct: 199 ISGHLGWVRCIAVEPGNQWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVIVSTRSP 258
Query: 116 LLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDL 175
L + G D++V WD++ ++ GH V + HP D +L + S D+T R+WD+
Sbjct: 259 YLFSCGEDKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTID--VLVTCSRDSTARIWDV 316
Query: 176 LAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYEM-VEA 234
K V TL H + V ++ + +I+ D + LWDL ++T+ ++ V A
Sbjct: 317 RTKASVHTLSGHTNAVATVRCQAAEPQIITGSHDTTIRLWDLVAGKTRVTLTNHKKSVRA 376
Query: 235 VCAIPPGSAFDS 246
V P F S
Sbjct: 377 VVLHPRHYTFAS 388
Score = 183 (69.5 bits), Expect = 1.0e-10, P = 1.0e-10
Identities = 61/246 (24%), Positives = 106/246 (43%)
Query: 367 QYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLW 426
Q+ + ++++DL+S L GH V + +S+ + + +D V+ W
Sbjct: 216 QWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGV---IVSTRSPYLFSCGEDKQVKCW 272
Query: 427 DSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKA 486
D E + GH+ AV + + + LV+ S D T ++W + KA
Sbjct: 273 DLEYNKVIRHYHGHLSAVYGLDLHPTI-DVLVTCSRDSTARIWD-----------VRTKA 320
Query: 487 KA-VVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFS 545
++ H + ++ + + TGS D T +W L + VT HK+ + +V
Sbjct: 321 SVHTLSGHTNAVATVRCQAAEPQIITGSHDTTIRLWDLVAGKTRVTLTNHKKSVRAVVLH 380
Query: 546 PVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGAD-GLVKL 604
P + S D IK W DGS ++ GH ++++ + +VS GAD G + L
Sbjct: 381 PRHYTFASGSPDN-IKQWKFPDGSFIQNLSGH-NAIINTLTVNSDGVLVS-GADNGTMHL 437
Query: 605 WTVRTG 610
W RTG
Sbjct: 438 WDWRTG 443
Score = 175 (66.7 bits), Expect = 7.9e-10, P = 7.9e-10
Identities = 40/163 (24%), Positives = 66/163 (40%)
Query: 485 KAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEF 544
K V++ H + +AV P + TGS DRT +W L ++ GH + V
Sbjct: 194 KLYRVISGHLGWVRCIAVEPGNQWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVIV 253
Query: 545 SPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKL 604
S + + DK +K W + ++ + GH S+V +V+C D ++
Sbjct: 254 STRSPYLFSCGEDKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTIDVLVTCSRDSTARI 313
Query: 605 WTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLW 647
W VRT + T H + + + TG D + LW
Sbjct: 314 WDVRTKASVHTLSGHTNAVATVRCQAAEPQIITGSHDTTIRLW 356
Score = 175 (66.7 bits), Expect = 7.9e-10, P = 7.9e-10
Identities = 55/225 (24%), Positives = 95/225 (42%)
Query: 25 LVVSSDGSFIACACGES--INIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSR 82
++VS+ ++ +CGE + DL + G + L L P +L +
Sbjct: 251 VIVSTRSPYLF-SCGEDKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTIDVLVTCSRDS 309
Query: 83 EIRVWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKG 142
R+WD+ T + + GH + C + + T D + +WD+ G
Sbjct: 310 TARIWDVRTKASVHTLSGHTNAVATVRCQAAEPQIITGSHDTTIRLWDLVAGKTRVTLTN 369
Query: 143 HKGVVSSILFHPDTDKSLLF-SGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGS 201
HK V +++ HP + F SGS D ++ W + L H + + ++ + SDG
Sbjct: 370 HKKSVRAVVLHP---RHYTFASGSPD-NIKQWKFPDGSFIQNLSGHNAIINTLTVNSDG- 424
Query: 202 TLISAGRDKVVNLWDLRDYSCKLTVPTYEMVEAVCAIPPGSAFDS 246
L+S + ++LWD R T ++ V A A+ PGS DS
Sbjct: 425 VLVSGADNGTMHLWDWR------TGYNFQRVHA--AVQPGS-LDS 460
Score = 164 (62.8 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 60/257 (23%), Positives = 115/257 (44%)
Query: 312 VLPSNQGLLCVTADQQLLLYTTVEVPEKKMELILSKRLVGYNEEILDLKFLGEEEQYLAV 371
V P NQ + +AD+ + ++ ++ K++L L+ G+ + + + YL
Sbjct: 211 VEPGNQWFVTGSADRTIKIW---DLASGKLKLSLT----GHISTVRGV-IVSTRSPYLFS 262
Query: 372 ATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESR 431
+QV+ +DL GH V LD L ++VT S+D++ R+WD ++
Sbjct: 263 CGEDKQVKCWDLEYNKVIRHYHGHLSAVYGLD---LHPTIDVLVTCSRDSTARIWDVRTK 319
Query: 432 CCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVA 491
V +GH AV V + + +++GS D TI++W D ++ K + +
Sbjct: 320 ASVHTLSGHTNAVATVR-CQAAEPQIITGSHDTTIRLW--DLVAG--------KTRVTLT 368
Query: 492 AHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVV 551
H K + ++ + P +GS D W+ PD + GH I ++ + D V+
Sbjct: 369 NHKKSVRAVVLHPRHYTFASGSPDNIK-QWKFPDGSFIQNLSGHNAIINTLTVNS-DGVL 426
Query: 552 ITASGDKTIKIWSISDG 568
++ + + T+ +W G
Sbjct: 427 VSGADNGTMHLWDWRTG 443
Score = 150 (57.9 bits), Expect = 6.3e-11, Sum P(2) = 6.3e-11
Identities = 42/165 (25%), Positives = 66/165 (40%)
Query: 93 KCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILF 152
K R GH G +A P T ADR + +WD+ G GH V ++
Sbjct: 194 KLYRVISGHLGWVRCIAVEPGNQWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVIV 253
Query: 153 HPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVV 212
T LFS +D V+ WDL K + H S V + + L++ RD
Sbjct: 254 --STRSPYLFSCGEDKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTIDVLVTCSRDSTA 311
Query: 213 NLWDLRDYSCKLTVPTYEMVEAVCAIPPGSAFDSFLSSYNQQTIK 257
+WD+R + T+ + AV + +A ++ + TI+
Sbjct: 312 RIWDVRTKASVHTLSGH--TNAVATVRCQAAEPQIITGSHDTTIR 354
Score = 148 (57.2 bits), Expect = 7.0e-07, P = 7.0e-07
Identities = 57/213 (26%), Positives = 96/213 (45%)
Query: 369 LAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDS 428
L + +++D+ + + + L+GH+ V + C + +I +TGS D ++RLWD
Sbjct: 302 LVTCSRDSTARIWDVRTKASVHTLSGHTNAVATV-RCQAAEPQI--ITGSHDTTIRLWDL 358
Query: 429 ESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKA 488
+ T H +V AV + F SGS D+ IK W F D NL
Sbjct: 359 VAGKTRVTLTNHKKSVRAVVLHPRHYTF-ASGSPDN-IKQWKFP----DGSFIQNL---- 408
Query: 489 VVAAHGKDINSLAVAPNDSLVCTGSQDRTACVW--RLP---DLVSVVTFRGH---KRGIW 540
+ H IN+L V +D ++ +G+ + T +W R V G + GI+
Sbjct: 409 --SGHNAIINTLTVN-SDGVLVSGADNGTMHLWDWRTGYNFQRVHAAVQPGSLDSESGIF 465
Query: 541 SVEFSPVDQVVITASGDKTIKIWSISDGSCLKT 573
+ F + ++TA DKTIK++ D + +T
Sbjct: 466 ACAFDQSESRLLTAEADKTIKVYKEDDTATEET 498
Score = 139 (54.0 bits), Expect = 6.7e-06, P = 6.7e-06
Identities = 44/204 (21%), Positives = 85/204 (41%)
Query: 34 IACACGESINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLK 93
+ C+ + I D+ + T+ G ++ + + + + + H IR+WDL K
Sbjct: 303 VTCSRDSTARIWDVRTKASVHTLSGHTNAVATVRCQAAEPQIITGSHDTTIRLWDLVAGK 362
Query: 94 CLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDV-DGGFCTHYFKGHKGVVSSILF 152
+ H + HP A+ D + W DG F + GH +++++
Sbjct: 363 TRVTLTNHKKSVRAVVLHPRHYTFASGSPDN-IKQWKFPDGSFIQN-LSGHNAIINTLTV 420
Query: 153 HPDTDKSLLFSGSDDATVRVWD---------LLAKKCVATLDKHFSRVTSMAITSDGSTL 203
+ D +L SG+D+ T+ +WD + A +LD S + + A S L
Sbjct: 421 NSD---GVLVSGADNGTMHLWDWRTGYNFQRVHAAVQPGSLDSE-SGIFACAFDQSESRL 476
Query: 204 ISAGRDKVVNLWDLRDYSCKLTVP 227
++A DK + ++ D + + T P
Sbjct: 477 LTAEADKTIKVYKEDDTATEETHP 500
Score = 83 (34.3 bits), Expect = 5.9e-21, Sum P(2) = 5.9e-21
Identities = 27/106 (25%), Positives = 56/106 (52%)
Query: 392 LAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSES-----RCCVGVGTGHMGA--- 443
L+GH+ I+ +T ++S +L V+G+ + ++ LWD + R V G + +
Sbjct: 408 LSGHNAII---NTLTVNSDGVL-VSGADNGTMHLWDWRTGYNFQRVHAAVQPGSLDSESG 463
Query: 444 VGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAV 489
+ A AF + ++ L++ +D TIKV+ D + + P++ K + +
Sbjct: 464 IFACAFDQS-ESRLLTAEADKTIKVYKEDDTATEETHPVSWKPEII 508
>UNIPROTKB|E2QYT6 [details] [associations]
symbol:PLRG1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013
GeneTree:ENSGT00700000104496 OMA:ITAEADK EMBL:AAEX03010065
Ensembl:ENSCAFT00000013353 Uniprot:E2QYT6
Length = 515
Score = 240 (89.5 bits), Expect = 6.0e-21, Sum P(2) = 6.0e-21
Identities = 53/189 (28%), Positives = 87/189 (46%)
Query: 33 FIACACGESINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTL 92
F+ + +I I DL++ +K ++ G T+ + +S LFS G ++++ WDL
Sbjct: 220 FVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVIVSTRSPYLFSCGEDKQVKCWDLEYN 279
Query: 93 KCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILF 152
K +R + GH G+ HP+ +L T D +WDV H GH V+++
Sbjct: 280 KVIRHYHGHLSAVYGLDLHPTIDVLVTCSRDSTARIWDVRTKASVHTLSGHTNAVATV-- 337
Query: 153 HPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVV 212
+ + +GS D T+R+WDL+A K TL H V ++ + T S D +
Sbjct: 338 RCQAAEPQIITGSHDTTIRLWDLVAGKTRVTLTNHKKSVRAVVLHPRHYTFASGSPDNIK 397
Query: 213 NLWDLRDYS 221
W D S
Sbjct: 398 Q-WKFPDGS 405
Score = 219 (82.2 bits), Expect = 1.2e-14, P = 1.2e-14
Identities = 73/259 (28%), Positives = 108/259 (41%)
Query: 391 VLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFS 450
V++GH V C+ A+ G VTGS D ++++WD S TGH+ V V S
Sbjct: 200 VISGHLGWVRCI---AVEPGNQWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVIVS 256
Query: 451 KKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHG--KDINSLAVAPNDSL 508
+ +L S D +K W D E N K + HG + L + P +
Sbjct: 257 TR-SPYLFSCGEDKQVKCW-------DLEY--N---KVIRHYHGHLSAVYGLDLHPTIDV 303
Query: 509 VCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDG 568
+ T S+D TA +W + SV T GH + +V + +IT S D TI++W + G
Sbjct: 304 LVTCSRDSTARIWDVRTKASVHTLSGHTNAVATVRCQAAEPQIITGSHDTTIRLWDLVAG 363
Query: 569 SCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAV 628
T H SV RA L + G+ +K W G I H I L V
Sbjct: 364 KTRVTLTNHKKSV-RAVVLHPRHYTFASGSPDNIKQWKFPDGSFIQNLSGHNAIINTLTV 422
Query: 629 GKKTEMFATGGSDALVNLW 647
+ +G + ++LW
Sbjct: 423 NSDG-VLVSGADNGTMHLW 440
Score = 213 (80.0 bits), Expect = 6.8e-18, Sum P(2) = 6.8e-18
Identities = 52/192 (27%), Positives = 88/192 (45%)
Query: 56 IEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPSGG 115
I G + +A+ P ++ + R I++WDL++ K S GH G+
Sbjct: 201 ISGHLGWVRCIAVEPGNQWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVIVSTRSP 260
Query: 116 LLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDL 175
L + G D++V WD++ ++ GH V + HP D +L + S D+T R+WD+
Sbjct: 261 YLFSCGEDKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTID--VLVTCSRDSTARIWDV 318
Query: 176 LAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYEM-VEA 234
K V TL H + V ++ + +I+ D + LWDL ++T+ ++ V A
Sbjct: 319 RTKASVHTLSGHTNAVATVRCQAAEPQIITGSHDTTIRLWDLVAGKTRVTLTNHKKSVRA 378
Query: 235 VCAIPPGSAFDS 246
V P F S
Sbjct: 379 VVLHPRHYTFAS 390
Score = 183 (69.5 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 61/246 (24%), Positives = 106/246 (43%)
Query: 367 QYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLW 426
Q+ + ++++DL+S L GH V + +S+ + + +D V+ W
Sbjct: 218 QWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGV---IVSTRSPYLFSCGEDKQVKCW 274
Query: 427 DSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKA 486
D E + GH+ AV + + + LV+ S D T ++W + KA
Sbjct: 275 DLEYNKVIRHYHGHLSAVYGLDLHPTI-DVLVTCSRDSTARIWD-----------VRTKA 322
Query: 487 KA-VVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFS 545
++ H + ++ + + TGS D T +W L + VT HK+ + +V
Sbjct: 323 SVHTLSGHTNAVATVRCQAAEPQIITGSHDTTIRLWDLVAGKTRVTLTNHKKSVRAVVLH 382
Query: 546 PVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGAD-GLVKL 604
P + S D IK W DGS ++ GH ++++ + +VS GAD G + L
Sbjct: 383 PRHYTFASGSPDN-IKQWKFPDGSFIQNLSGH-NAIINTLTVNSDGVLVS-GADNGTMHL 439
Query: 605 WTVRTG 610
W RTG
Sbjct: 440 WDWRTG 445
Score = 175 (66.7 bits), Expect = 7.9e-10, P = 7.9e-10
Identities = 40/163 (24%), Positives = 66/163 (40%)
Query: 485 KAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEF 544
K V++ H + +AV P + TGS DRT +W L ++ GH + V
Sbjct: 196 KLYRVISGHLGWVRCIAVEPGNQWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVIV 255
Query: 545 SPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKL 604
S + + DK +K W + ++ + GH S+V +V+C D ++
Sbjct: 256 STRSPYLFSCGEDKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTIDVLVTCSRDSTARI 315
Query: 605 WTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLW 647
W VRT + T H + + + TG D + LW
Sbjct: 316 WDVRTKASVHTLSGHTNAVATVRCQAAEPQIITGSHDTTIRLW 358
Score = 175 (66.7 bits), Expect = 7.9e-10, P = 7.9e-10
Identities = 55/225 (24%), Positives = 95/225 (42%)
Query: 25 LVVSSDGSFIACACGES--INIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSR 82
++VS+ ++ +CGE + DL + G + L L P +L +
Sbjct: 253 VIVSTRSPYLF-SCGEDKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTIDVLVTCSRDS 311
Query: 83 EIRVWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKG 142
R+WD+ T + + GH + C + + T D + +WD+ G
Sbjct: 312 TARIWDVRTKASVHTLSGHTNAVATVRCQAAEPQIITGSHDTTIRLWDLVAGKTRVTLTN 371
Query: 143 HKGVVSSILFHPDTDKSLLF-SGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGS 201
HK V +++ HP + F SGS D ++ W + L H + + ++ + SDG
Sbjct: 372 HKKSVRAVVLHP---RHYTFASGSPD-NIKQWKFPDGSFIQNLSGHNAIINTLTVNSDG- 426
Query: 202 TLISAGRDKVVNLWDLRDYSCKLTVPTYEMVEAVCAIPPGSAFDS 246
L+S + ++LWD R T ++ V A A+ PGS DS
Sbjct: 427 VLVSGADNGTMHLWDWR------TGYNFQRVHA--AVQPGS-LDS 462
Score = 164 (62.8 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 60/257 (23%), Positives = 115/257 (44%)
Query: 312 VLPSNQGLLCVTADQQLLLYTTVEVPEKKMELILSKRLVGYNEEILDLKFLGEEEQYLAV 371
V P NQ + +AD+ + ++ ++ K++L L+ G+ + + + YL
Sbjct: 213 VEPGNQWFVTGSADRTIKIW---DLASGKLKLSLT----GHISTVRGV-IVSTRSPYLFS 264
Query: 372 ATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESR 431
+QV+ +DL GH V LD L ++VT S+D++ R+WD ++
Sbjct: 265 CGEDKQVKCWDLEYNKVIRHYHGHLSAVYGLD---LHPTIDVLVTCSRDSTARIWDVRTK 321
Query: 432 CCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVA 491
V +GH AV V + + +++GS D TI++W D ++ K + +
Sbjct: 322 ASVHTLSGHTNAVATVR-CQAAEPQIITGSHDTTIRLW--DLVAG--------KTRVTLT 370
Query: 492 AHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVV 551
H K + ++ + P +GS D W+ PD + GH I ++ + D V+
Sbjct: 371 NHKKSVRAVVLHPRHYTFASGSPDNIK-QWKFPDGSFIQNLSGHNAIINTLTVNS-DGVL 428
Query: 552 ITASGDKTIKIWSISDG 568
++ + + T+ +W G
Sbjct: 429 VSGADNGTMHLWDWRTG 445
Score = 150 (57.9 bits), Expect = 6.3e-11, Sum P(2) = 6.3e-11
Identities = 42/165 (25%), Positives = 66/165 (40%)
Query: 93 KCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILF 152
K R GH G +A P T ADR + +WD+ G GH V ++
Sbjct: 196 KLYRVISGHLGWVRCIAVEPGNQWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVIV 255
Query: 153 HPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVV 212
T LFS +D V+ WDL K + H S V + + L++ RD
Sbjct: 256 --STRSPYLFSCGEDKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTIDVLVTCSRDSTA 313
Query: 213 NLWDLRDYSCKLTVPTYEMVEAVCAIPPGSAFDSFLSSYNQQTIK 257
+WD+R + T+ + AV + +A ++ + TI+
Sbjct: 314 RIWDVRTKASVHTLSGH--TNAVATVRCQAAEPQIITGSHDTTIR 356
Score = 148 (57.2 bits), Expect = 7.1e-07, P = 7.1e-07
Identities = 57/213 (26%), Positives = 96/213 (45%)
Query: 369 LAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDS 428
L + +++D+ + + + L+GH+ V + C + +I +TGS D ++RLWD
Sbjct: 304 LVTCSRDSTARIWDVRTKASVHTLSGHTNAVATV-RCQAAEPQI--ITGSHDTTIRLWDL 360
Query: 429 ESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKA 488
+ T H +V AV + F SGS D+ IK W F D NL
Sbjct: 361 VAGKTRVTLTNHKKSVRAVVLHPRHYTF-ASGSPDN-IKQWKFP----DGSFIQNL---- 410
Query: 489 VVAAHGKDINSLAVAPNDSLVCTGSQDRTACVW--RLP---DLVSVVTFRGH---KRGIW 540
+ H IN+L V +D ++ +G+ + T +W R V G + GI+
Sbjct: 411 --SGHNAIINTLTVN-SDGVLVSGADNGTMHLWDWRTGYNFQRVHAAVQPGSLDSESGIF 467
Query: 541 SVEFSPVDQVVITASGDKTIKIWSISDGSCLKT 573
+ F + ++TA DKTIK++ D + +T
Sbjct: 468 ACAFDQSESRLLTAEADKTIKVYKEDDTATEET 500
Score = 139 (54.0 bits), Expect = 6.8e-06, P = 6.8e-06
Identities = 44/204 (21%), Positives = 85/204 (41%)
Query: 34 IACACGESINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLK 93
+ C+ + I D+ + T+ G ++ + + + + + H IR+WDL K
Sbjct: 305 VTCSRDSTARIWDVRTKASVHTLSGHTNAVATVRCQAAEPQIITGSHDTTIRLWDLVAGK 364
Query: 94 CLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDV-DGGFCTHYFKGHKGVVSSILF 152
+ H + HP A+ D + W DG F + GH +++++
Sbjct: 365 TRVTLTNHKKSVRAVVLHPRHYTFASGSPDN-IKQWKFPDGSFIQN-LSGHNAIINTLTV 422
Query: 153 HPDTDKSLLFSGSDDATVRVWD---------LLAKKCVATLDKHFSRVTSMAITSDGSTL 203
+ D +L SG+D+ T+ +WD + A +LD S + + A S L
Sbjct: 423 NSD---GVLVSGADNGTMHLWDWRTGYNFQRVHAAVQPGSLDSE-SGIFACAFDQSESRL 478
Query: 204 ISAGRDKVVNLWDLRDYSCKLTVP 227
++A DK + ++ D + + T P
Sbjct: 479 LTAEADKTIKVYKEDDTATEETHP 502
Score = 83 (34.3 bits), Expect = 6.0e-21, Sum P(2) = 6.0e-21
Identities = 27/106 (25%), Positives = 56/106 (52%)
Query: 392 LAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSES-----RCCVGVGTGHMGA--- 443
L+GH+ I+ +T ++S +L V+G+ + ++ LWD + R V G + +
Sbjct: 410 LSGHNAII---NTLTVNSDGVL-VSGADNGTMHLWDWRTGYNFQRVHAAVQPGSLDSESG 465
Query: 444 VGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAV 489
+ A AF + ++ L++ +D TIKV+ D + + P++ K + +
Sbjct: 466 IFACAFDQS-ESRLLTAEADKTIKVYKEDDTATEETHPVSWKPEII 510
>UNIPROTKB|H0YN81 [details] [associations]
symbol:WDR61 "WD repeat-containing protein 61" species:9606
"Homo sapiens" [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 EMBL:AC090607 HGNC:HGNC:30300 ChiTaRS:WDR61
Ensembl:ENST00000560569 Bgee:H0YN81 Uniprot:H0YN81
Length = 294
Score = 241 (89.9 bits), Expect = 6.1e-21, Sum P(2) = 6.1e-21
Identities = 73/255 (28%), Positives = 122/255 (47%)
Query: 386 MSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSES-RCCVGVGTGHMGAV 444
+ + L GH V+ +D +S + + S D +RLWD E+ + + G + A
Sbjct: 54 LDLQWSLEGHQLGVVSVD---ISHTLPIAASSSLDAHIRLWDLENGKQIKSIDAGPVDA- 109
Query: 445 GAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAP 504
+AFS Q +L +G+ H KV F S E ++ + GK I S+A +P
Sbjct: 110 WTLAFSPDSQ-YLATGT--HVGKVNIFGVESGKKEYSLDTR--------GKFILSIAYSP 158
Query: 505 NDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWS 564
+ + +G+ D ++ + + T GH I S+ FSP Q+++TAS D IKI+
Sbjct: 159 DGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYD 218
Query: 565 ISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIW 624
+ + T GH S VL +F VS +D VK+W V T C+ T+ H+D++W
Sbjct: 219 VQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCVHTFFDHQDQVW 278
Query: 625 ALAV-GKKTEMFATG 638
+ G +++ + G
Sbjct: 279 GVKYNGNGSKIVSVG 293
Score = 207 (77.9 bits), Expect = 1.4e-14, P = 1.4e-14
Identities = 54/182 (29%), Positives = 88/182 (48%)
Query: 42 INIVDLSNAS-IKSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKG 100
I + DL N IKS G D T LA SPD + L + H ++ ++ + + K S
Sbjct: 88 IRLWDLENGKQIKSIDAGPVDAWT-LAFSPDSQYLATGTHVGKVNIFGVESGKKEYSLDT 146
Query: 101 HDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSL 160
+ +A P G LA+ D + ++D+ G H +GH + S+ F PD+ L
Sbjct: 147 RGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQ--L 204
Query: 161 LFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDY 220
L + SDD ++++D+ TL H S V ++A D + +S+ DK V +WD+
Sbjct: 205 LVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTR 264
Query: 221 SC 222
+C
Sbjct: 265 TC 266
Score = 206 (77.6 bits), Expect = 1.9e-14, P = 1.9e-14
Identities = 53/184 (28%), Positives = 86/184 (46%)
Query: 25 LVVSSDGSFIACACGES-INIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSRE 83
L S D ++A +NI + + + +++ I ++A SPD K L S
Sbjct: 112 LAFSPDSQYLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGI 171
Query: 84 IRVWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGH 143
I ++D++T K L + +GH P + P LL TA D + ++DV GH
Sbjct: 172 INIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGH 231
Query: 144 KGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTL 203
V ++ F PD D + S S D +V+VWD+ + CV T H +V + +GS +
Sbjct: 232 ASWVLNVAFCPD-DTHFV-SSSSDKSVKVWDVGTRTCVHTFFDHQDQVWGVKYNGNGSKI 289
Query: 204 ISAG 207
+S G
Sbjct: 290 VSVG 293
Score = 163 (62.4 bits), Expect = 5.6e-09, Sum P(2) = 5.6e-09
Identities = 58/240 (24%), Positives = 100/240 (41%)
Query: 414 IVTGSKDNSVRLWD-SESRCCVGVGT-GHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSF 471
+VTGS D+ V++W + R + GH V +V S L S S D I++W
Sbjct: 35 VVTGSLDDLVKVWKWRDERLDLQWSLEGHQLGVVSVDISHTLP-IAASSSLDAHIRLW-- 91
Query: 472 DGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVT 531
D E +K+ + A D +LA +P+ + TG+ ++ + +
Sbjct: 92 -----DLENGKQIKS---IDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESGKKEYS 143
Query: 532 FRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGA 591
+ I S+ +SP + + + + D I I+ I+ G L T EGH + +F
Sbjct: 144 LDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQ 203
Query: 592 QIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLWHDST 651
+V+ DG +K++ V+ T H + +A F + SD V +W T
Sbjct: 204 LLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGT 263
Score = 148 (57.2 bits), Expect = 2.1e-07, P = 2.1e-07
Identities = 48/203 (23%), Positives = 90/203 (44%)
Query: 55 TIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPSG 114
++EG + ++ +S + SS IR+WDL K ++S A +A P
Sbjct: 59 SLEGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLENGKQIKSIDAGPVDAWTLAFSPDS 118
Query: 115 GLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWD 174
LAT KV ++ V+ G + + SI + PD L SG+ D + ++D
Sbjct: 119 QYLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDG--KYLASGAIDGIINIFD 176
Query: 175 LLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYEMVEA 234
+ K + TL+ H + S+ + D L++A D + ++D++ + T+ +
Sbjct: 177 IATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVL 236
Query: 235 VCAIPPGSAFDSFLSSYNQQTIK 257
A P F+SS + +++K
Sbjct: 237 NVAFCPDDTH--FVSSSSDKSVK 257
Score = 146 (56.5 bits), Expect = 5.8e-07, Sum P(2) = 5.8e-07
Identities = 48/194 (24%), Positives = 90/194 (46%)
Query: 365 EEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALS-SGKILIVTGSKDNSV 423
+ QYLA T++ +V ++ + S Y L + +L + A S GK L +G+ D +
Sbjct: 117 DSQYLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSI---AYSPDGKYL-ASGAIDGII 172
Query: 424 RLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMN 483
++D + + GH + ++ FS Q LV+ S D IK++ Q N
Sbjct: 173 NIFDIATGKLLHTLEGHAMPIRSLTFSPDSQ-LLVTASDDGYIKIYDV--------QHAN 223
Query: 484 LKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVE 543
L ++ H + ++A P+D+ + S D++ VW + V TF H+ +W V+
Sbjct: 224 LAG--TLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCVHTFFDHQDQVWGVK 281
Query: 544 FSPVDQVVITASGD 557
++ +++ GD
Sbjct: 282 YNGNGSKIVSV-GD 294
Score = 143 (55.4 bits), Expect = 7.7e-07, P = 7.7e-07
Identities = 46/212 (21%), Positives = 94/212 (44%)
Query: 440 HMGAVGAVAF-SKKLQNF--LVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKD 496
H A+ +VA+ + K +N +V+GS D +KVW + D + + VV+ D
Sbjct: 15 HDDAIWSVAWGTNKKENSETVVTGSLDDLVKVWKWRDERLDLQWSLEGHQLGVVSV---D 71
Query: 497 IN-SLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITAS 555
I+ +L +A + SL D +W L + + + W++ FSP Q + T +
Sbjct: 72 ISHTLPIAASSSL------DAHIRLWDLENGKQIKSIDAGPVDAWTLAFSPDSQYLATGT 125
Query: 556 GDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIAT 615
+ I+ + G + + +L ++ G + S DG++ ++ + TG+ + T
Sbjct: 126 HVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHT 185
Query: 616 YDKHEDKIWALAVGKKTEMFATGGSDALVNLW 647
+ H I +L +++ T D + ++
Sbjct: 186 LEGHAMPIRSLTFSPDSQLLVTASDDGYIKIY 217
Score = 106 (42.4 bits), Expect = 3.8e-08, Sum P(2) = 3.8e-08
Identities = 29/102 (28%), Positives = 49/102 (48%)
Query: 349 LVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALS 408
L G+ I L F + Q L A++ +++YD+ + + L+GH+ VL + C
Sbjct: 186 LEGHAMPIRSLTF-SPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDD 244
Query: 409 SGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFS 450
+ V+ S D SV++WD +R CV H V V ++
Sbjct: 245 TH---FVSSSSDKSVKVWDVGTRTCVHTFFDHQDQVWGVKYN 283
Score = 95 (38.5 bits), Expect = 3.8e-08, Sum P(2) = 3.8e-08
Identities = 28/136 (20%), Positives = 60/136 (44%)
Query: 84 IRVWDLSTLKCLRSW--KGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFK 141
++VW + W +GH + + + + A++ D + +WD++ G
Sbjct: 44 VKVWKWRDERLDLQWSLEGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLENGKQIKSID 103
Query: 142 GHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGS 201
++ F PD+ L +G+ V ++ + + K +LD + S+A + DG
Sbjct: 104 AGPVDAWTLAFSPDSQ--YLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGK 161
Query: 202 TLISAGRDKVVNLWDL 217
L S D ++N++D+
Sbjct: 162 YLASGAIDGIINIFDI 177
Score = 39 (18.8 bits), Expect = 6.1e-21, Sum P(2) = 6.1e-21
Identities = 6/21 (28%), Positives = 12/21 (57%)
Query: 199 DGSTLISAGRDKVVNLWDLRD 219
+ T+++ D +V +W RD
Sbjct: 31 NSETVVTGSLDDLVKVWKWRD 51
>ASPGD|ASPL0000002074 [details] [associations]
symbol:rcoA species:162425 "Emericella nidulans"
[GO:0070791 "cleistothecium development" evidence=IMP] [GO:0043941
"positive regulation of sexual sporulation resulting in formation
of a cellular spore" evidence=IMP] [GO:0045461 "sterigmatocystin
biosynthetic process" evidence=IMP] [GO:0016584 "nucleosome
positioning" evidence=IMP] [GO:0017053 "transcriptional repressor
complex" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0036033 "mediator complex binding" evidence=IEA] [GO:0042393
"histone binding" evidence=IEA] [GO:0043130 "ubiquitin binding"
evidence=IEA] [GO:0080025 "phosphatidylinositol-3,5-bisphosphate
binding" evidence=IEA] [GO:0003714 "transcription corepressor
activity" evidence=IEA] [GO:0042826 "histone deacetylase binding"
evidence=IEA] [GO:0001191 "RNA polymerase II transcription factor
binding transcription factor activity involved in negative
regulation of transcription" evidence=IEA] [GO:0010914 "positive
regulation of sterigmatocystin biosynthetic process" evidence=IMP]
[GO:0006342 "chromatin silencing" evidence=IEA] [GO:0007070
"negative regulation of transcription from RNA polymerase II
promoter during mitosis" evidence=IEA] [GO:0061392 "regulation of
transcription from RNA polymerase II promoter in response to
osmotic stress" evidence=IEA] [GO:0043486 "histone exchange"
evidence=IEA] [GO:0000433 "negative regulation of transcription
from RNA polymerase II promoter by glucose" evidence=IEA]
[GO:2001020 "regulation of response to DNA damage stimulus"
evidence=IEA] [GO:0035955 "negative regulation of dipeptide
transport by negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0043156 "chromatin
remodeling in response to cation stress" evidence=IEA] [GO:0061418
"regulation of transcription from RNA polymerase II promoter in
response to hypoxia" evidence=IEA] [GO:0001198 "negative regulation
of mating-type specific transcription from RNA polymerase II
promoter" evidence=IEA] [GO:2000531 "regulation of fatty acid
biosynthetic process by regulation of transcription from RNA
polymerase II promoter" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 EMBL:BN001301 HOGENOM:HOG000200558
InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558
ProteinModelPortal:C8V0I4 EnsemblFungi:CADANIAT00007274 OMA:SQYIVNP
Uniprot:C8V0I4
Length = 574
Score = 277 (102.6 bits), Expect = 6.1e-21, P = 6.1e-21
Identities = 88/332 (26%), Positives = 150/332 (45%)
Query: 338 EKKMELILSKRLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSE 397
++ +++ L LV ++ + ++F + +YLA N Q++D++ VL S
Sbjct: 255 QRVLDVELVHHLV-HDSVVCCVRF-SRDGKYLATGCN-RSAQIFDVTLGQNVAVLQDESV 311
Query: 398 I----VLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKL 453
+ C GK L TG++D +R+WD +R + +GH + ++ F+
Sbjct: 312 DKSGDLYIRSVCFSPDGKYL-ATGAEDKQIRVWDIATRTIKHIFSGHEQDIYSLDFAGN- 369
Query: 454 QNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKD-INSLAVAPNDSLVCTG 512
++ SGS D T+++W D AE K V +D + ++A++P+ V G
Sbjct: 370 GRYIASGSGDKTVRLW------DIAE------GKLVYTLSIEDGVTTVAMSPDGLYVAAG 417
Query: 513 SQDRTACVWRLPDLVSVVTFR---GHKRGIWSVEFSPVDQVVITASGDKTIKIWSIS--- 566
S D+T VW V GHK ++SV F+P + +++ S DKTIK+W ++
Sbjct: 418 SLDKTVRVWDTTTGYLVERLENPDGHKDSVYSVAFAPNGKELVSGSLDKTIKLWELNLPR 477
Query: 567 --------DGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDK 618
G C +TFEGH VL G ++S D V+ W TG
Sbjct: 478 QQYNSAGKGGKCHRTFEGHKDFVLSVCLTPDGHWVMSGSKDRGVQFWDPITGNAQMMLQG 537
Query: 619 HEDKIWALAVGKKTEMFATGGSDALVNLWHDS 650
H++ + ++A +FATG D +W S
Sbjct: 538 HKNSVISVAPSPTGNLFATGSGDMRARIWRYS 569
Score = 236 (88.1 bits), Expect = 2.1e-16, P = 2.1e-16
Identities = 60/199 (30%), Positives = 95/199 (47%)
Query: 28 SSDGSFIACACGESINIVDLS---NASI---KSTIEGGSDTITALALSPDDKLLFSSGHS 81
S DG ++A C S I D++ N ++ +S + G I ++ SPD K L +
Sbjct: 278 SRDGKYLATGCNRSAQIFDVTLGQNVAVLQDESVDKSGDLYIRSVCFSPDGKYLATGAED 337
Query: 82 REIRVWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFK 141
++IRVWD++T + GH+ + +G +A+ D+ V +WD+ G +
Sbjct: 338 KQIRVWDIATRTIKHIFSGHEQDIYSLDFAGNGRYIASGSGDKTVRLWDIAEGKLVYTLS 397
Query: 142 GHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATL---DKHFSRVTSMAITS 198
GV +++ PD + +GS D TVRVWD V L D H V S+A
Sbjct: 398 IEDGV-TTVAMSPDG--LYVAAGSLDKTVRVWDTTTGYLVERLENPDGHKDSVYSVAFAP 454
Query: 199 DGSTLISAGRDKVVNLWDL 217
+G L+S DK + LW+L
Sbjct: 455 NGKELVSGSLDKTIKLWEL 473
Score = 221 (82.9 bits), Expect = 9.1e-15, P = 9.1e-15
Identities = 64/233 (27%), Positives = 111/233 (47%)
Query: 28 SSDGSFIACACGES-INIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRV 86
S DG ++A + I + D++ +IK G I +L + + + + S + +R+
Sbjct: 325 SPDGKYLATGAEDKQIRVWDIATRTIKHIFSGHEQDIYSLDFAGNGRYIASGSGDKTVRL 384
Query: 87 WDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFK---GH 143
WD++ K + + DG +A P G +A D+ V VWD G+ + GH
Sbjct: 385 WDIAEGKLVYTLSIEDGVTT-VAMSPDGLYVAAGSLDKTVRVWDTTTGYLVERLENPDGH 443
Query: 144 KGVVSSILFHPDTDKSLLFSGSDDATVRVWDL-LAK----------KCVATLDKHFSRVT 192
K V S+ F P+ K L+ SGS D T+++W+L L + KC T + H V
Sbjct: 444 KDSVYSVAFAPN-GKELV-SGSLDKTIKLWELNLPRQQYNSAGKGGKCHRTFEGHKDFVL 501
Query: 193 SMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYE-MVEAVCAIPPGSAF 244
S+ +T DG ++S +D+ V WD + ++ + ++ V +V P G+ F
Sbjct: 502 SVCLTPDGHWVMSGSKDRGVQFWDPITGNAQMMLQGHKNSVISVAPSPTGNLF 554
Score = 202 (76.2 bits), Expect = 1.1e-12, P = 1.1e-12
Identities = 60/222 (27%), Positives = 101/222 (45%)
Query: 444 VGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVA 503
+ +V FS +L +G+ D I+VW D A + + K + + H +DI SL A
Sbjct: 319 IRSVCFSPD-GKYLATGAEDKQIRVW------DIATRTI----KHIFSGHEQDIYSLDFA 367
Query: 504 PNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIW 563
N + +GS D+T +W + + V T + G+ +V SP V S DKT+++W
Sbjct: 368 GNGRYIASGSGDKTVRLWDIAEGKLVYTL-SIEDGVTTVAMSPDGLYVAAGSLDKTVRVW 426
Query: 564 SISDGSCLKTFE---GHTSSVLRASFLTRGAQIVSCGADGLVKLWTV-----------RT 609
+ G ++ E GH SV +F G ++VS D +KLW + +
Sbjct: 427 DTTTGYLVERLENPDGHKDSVYSVAFAPNGKELVSGSLDKTIKLWELNLPRQQYNSAGKG 486
Query: 610 GECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLWHDST 651
G+C T++ H+D + ++ + +G D V W T
Sbjct: 487 GKCHRTFEGHKDFVLSVCLTPDGHWVMSGSKDRGVQFWDPIT 528
Score = 196 (74.1 bits), Expect = 4.9e-12, P = 4.9e-12
Identities = 53/209 (25%), Positives = 96/209 (45%)
Query: 28 SSDGSFIACACGE-SINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRV 86
+ +G +IA G+ ++ + D++ + T+ D +T +A+SPD + + + +RV
Sbjct: 367 AGNGRYIASGSGDKTVRLWDIAEGKLVYTLSI-EDGVTTVAMSPDGLYVAAGSLDKTVRV 425
Query: 87 WDLST---LKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVD----------- 132
WD +T ++ L + GH +A P+G L + D+ + +W+++
Sbjct: 426 WDTTTGYLVERLENPDGHKDSVYSVAFAPNGKELVSGSLDKTIKLWELNLPRQQYNSAGK 485
Query: 133 GGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVT 192
GG C F+GHK V S+ PD + SGS D V+ WD + L H + V
Sbjct: 486 GGKCHRTFEGHKDFVLSVCLTPDGH--WVMSGSKDRGVQFWDPITGNAQMMLQGHKNSVI 543
Query: 193 SMAITSDGSTLISAGRDKVVNLWDLRDYS 221
S+A + G+ + D +W Y+
Sbjct: 544 SVAPSPTGNLFATGSGDMRARIWRYSAYT 572
Score = 151 (58.2 bits), Expect = 4.0e-07, P = 4.0e-07
Identities = 41/164 (25%), Positives = 76/164 (46%)
Query: 25 LVVSSDGSFIAC-ACGESINIVDLSNASIKSTIE---GGSDTITALALSPDDKLLFSSGH 80
+ +S DG ++A + +++ + D + + +E G D++ ++A +P+ K L S
Sbjct: 405 VAMSPDGLYVAAGSLDKTVRVWDTTTGYLVERLENPDGHKDSVYSVAFAPNGKELVSGSL 464
Query: 81 SREIRVWDLSTL-----------KCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVW 129
+ I++W+L+ KC R+++GH + + P G + + DR V W
Sbjct: 465 DKTIKLWELNLPRQQYNSAGKGGKCHRTFEGHKDFVLSVCLTPDGHWVMSGSKDRGVQFW 524
Query: 130 DVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVW 173
D G +GHK V S+ P +L +GS D R+W
Sbjct: 525 DPITGNAQMMLQGHKNSVISVA--PSPTGNLFATGSGDMRARIW 566
Score = 120 (47.3 bits), Expect = 0.00092, P = 0.00092
Identities = 38/147 (25%), Positives = 59/147 (40%)
Query: 101 HDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHK----G--VVSSILFHP 154
HD + G LAT G +R ++DV G + G + S+ F P
Sbjct: 268 HDSVVCCVRFSRDGKYLAT-GCNRSAQIFDVTLGQNVAVLQDESVDKSGDLYIRSVCFSP 326
Query: 155 DTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNL 214
D L +G++D +RVWD+ + H + S+ +G + S DK V L
Sbjct: 327 DG--KYLATGAEDKQIRVWDIATRTIKHIFSGHEQDIYSLDFAGNGRYIASGSGDKTVRL 384
Query: 215 WDLRDYSCKLTVPTYEMVEAVCAIPPG 241
WD+ + T+ + V V P G
Sbjct: 385 WDIAEGKLVYTLSIEDGVTTVAMSPDG 411
>POMBASE|SPAC4D7.03 [details] [associations]
symbol:pop2 "F-box/WD repeat protein Pop2" species:4896
"Schizosaccharomyces pombe" [GO:0005635 "nuclear envelope"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0007346 "regulation of mitotic cell cycle" evidence=IC]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IDA]
[GO:0030674 "protein binding, bridging" evidence=IPI] [GO:0032876
"negative regulation of DNA endoreduplication" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00646 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
PomBase:SPAC4D7.03 GO:GO:0007346 GO:GO:0005737 GO:GO:0005635
EMBL:CU329670 GenomeReviews:CU329670_GR Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0006511
GO:GO:0019005 GO:GO:0032876 KO:K03361 OrthoDB:EOG4B2X5M
EMBL:AF038867 EMBL:AF064515 PIR:T43557 RefSeq:NP_594956.1
ProteinModelPortal:O14170 IntAct:O14170 STRING:O14170
EnsemblFungi:SPAC4D7.03.1 GeneID:2543514 KEGG:spo:SPAC4D7.03
OMA:RIANMEC NextBio:20804524 Uniprot:O14170
Length = 703
Score = 215 (80.7 bits), Expect = 6.2e-21, Sum P(2) = 6.2e-21
Identities = 54/202 (26%), Positives = 97/202 (48%)
Query: 454 QNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKA-----KAVVAAH---GKDINSLAVAPN 505
Q ++VSGS DHT++VW +D P N + K H G + ++
Sbjct: 457 QPYIVSGSRDHTLRVWKLPKNTDPPYLPDNTNSIDRWEKNPYFVHTLIGHTDSVRTISGY 516
Query: 506 DSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSI 565
++ +GS D + +WR+ + RGH I+SV + P + I+ S DK+I++W +
Sbjct: 517 GDILVSGSYDSSIRIWRVSTGECLYHLRGHSLRIYSVLYEPERNICISGSMDKSIRVWDL 576
Query: 566 SDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWA 625
S G+C EGH + V + +++S AD +++W + TG+ + + I +
Sbjct: 577 STGTCKYVLEGHDAFVTLLNVFQN--RLISGSADSTIRIWDLNTGKPLMVLPSNSGYISS 634
Query: 626 LAVGKKTEMFATGGSDALVNLW 647
V + ++ + G+D V LW
Sbjct: 635 F-VSDEHKIIS--GNDGSVKLW 653
Score = 210 (79.0 bits), Expect = 2.1e-13, P = 2.1e-13
Identities = 52/181 (28%), Positives = 89/181 (49%)
Query: 40 ESINIVDL--SNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRS 97
++ N +D N T+ G +D++ ++ D +L S + IR+W +ST +CL
Sbjct: 485 DNTNSIDRWEKNPYFVHTLIGHTDSVRTISGYGD--ILVSGSYDSSIRIWRVSTGECLYH 542
Query: 98 WKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTD 157
+GH + P + + D+ + VWD+ G C + +GH V+ + +
Sbjct: 543 LRGHSLRIYSVLYEPERNICISGSMDKSIRVWDLSTGTCKYVLEGHDAFVTLL----NVF 598
Query: 158 KSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDL 217
++ L SGS D+T+R+WDL K + L + ++S SD +IS G D V LWD+
Sbjct: 599 QNRLISGSADSTIRIWDLNTGKPLMVLPSNSGYISSFV--SDEHKIIS-GNDGSVKLWDV 655
Query: 218 R 218
R
Sbjct: 656 R 656
Score = 198 (74.8 bits), Expect = 4.2e-12, P = 4.2e-12
Identities = 80/309 (25%), Positives = 135/309 (43%)
Query: 344 ILSKRLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLD 403
+L RL G+ E + +K E L + + V+V+++ C+++ GH I+ CL+
Sbjct: 382 VLEARLEGHKEGVWAVKI---HENTLVSGSIDKTVRVWNIEKAKCTHIFRGHISIIRCLE 438
Query: 404 TCALSS----G-KIL------IVTGSKDNSVRLW---------------DSESRCCVGVG 437
S G +I+ IV+GS+D+++R+W +S R
Sbjct: 439 ILVPSRLIRHGVEIVEPDQPYIVSGSRDHTLRVWKLPKNTDPPYLPDNTNSIDRWEKNPY 498
Query: 438 TGH--MGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGK 495
H +G +V + LVSGS D +I++W E +L+ H
Sbjct: 499 FVHTLIGHTDSVRTISGYGDILVSGSYDSSIRIWRVS----TGECLYHLRG------HSL 548
Query: 496 DINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITAS 555
I S+ P ++ +GS D++ VW L GH + + +I+ S
Sbjct: 549 RIYSVLYEPERNICISGSMDKSIRVWDLSTGTCKYVLEGHDAFVTLLNV--FQNRLISGS 606
Query: 556 GDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIAT 615
D TI+IW ++ G L ++ + +SF++ +I+S G DG VKLW VRTG+ +
Sbjct: 607 ADSTIRIWDLNTGKPLMVLPSNSGYI--SSFVSDEHKIIS-GNDGSVKLWDVRTGKLLRF 663
Query: 616 YDKHEDKIW 624
KIW
Sbjct: 664 LLTDLTKIW 672
Score = 124 (48.7 bits), Expect = 0.00045, P = 0.00045
Identities = 54/209 (25%), Positives = 91/209 (43%)
Query: 129 WDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHF 188
W+ + F H GH V +I + D +L SGS D+++R+W + +C+ L H
Sbjct: 493 WEKNPYF-VHTLIGHTDSVRTISGYGD----ILVSGSYDSSIRIWRVSTGECLYHLRGHS 547
Query: 189 SRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYEMVEAVCAI-----PPGSA 243
R+ S+ + + IS DK + +WDL +CK + ++ + + GSA
Sbjct: 548 LRIYSVLYEPERNICISGSMDKSIRVWDLSTGTCKYVLEGHDAFVTLLNVFQNRLISGSA 607
Query: 244 FDSFLSSYNQQTIKK----KRRSLEI-------HFITVGERGIVRMWNADSACLYEQKSS 292
DS + ++ T K S I H I G G V++W+ + L +
Sbjct: 608 -DSTIRIWDLNTGKPLMVLPSNSGYISSFVSDEHKIISGNDGSVKLWDVRTGKLLRFLLT 666
Query: 293 DVTISFEMD-DSKRGFTAATVLPSNQGLL 320
D+T + +D D+ R A V +Q L
Sbjct: 667 DLTKIWHVDFDAMR--CVAAVQRDDQAYL 693
Score = 115 (45.5 bits), Expect = 6.2e-21, Sum P(2) = 6.2e-21
Identities = 36/125 (28%), Positives = 61/125 (48%)
Query: 63 ITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGA 122
IT+L L D +++ +SG S I++ + T +GH + H + L +
Sbjct: 354 ITSLLLHKD-RIITTSG-SGTIQIHNAITGVLEARLEGHKEGVWAVKIHEN--TLVSGSI 409
Query: 123 DRKVLVWDVDGGFCTHYFKGHKGVV--------SSILFHP----DTDKSLLFSGSDDATV 170
D+ V VW+++ CTH F+GH ++ S ++ H + D+ + SGS D T+
Sbjct: 410 DKTVRVWNIEKAKCTHIFRGHISIIRCLEILVPSRLIRHGVEIVEPDQPYIVSGSRDHTL 469
Query: 171 RVWDL 175
RVW L
Sbjct: 470 RVWKL 474
Score = 102 (41.0 bits), Expect = 1.0e-08, Sum P(2) = 1.0e-08
Identities = 33/129 (25%), Positives = 56/129 (43%)
Query: 524 PDLVSVVT-FRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVL 582
PD +V+ R H +W + + D + +I W + + T GHT SV
Sbjct: 455 PDQPYIVSGSRDHTLRVWKLPKN-TDPPYLP-DNTNSIDRWE-KNPYFVHTLIGHTDSVR 511
Query: 583 RASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDA 642
S G +VS D +++W V TGEC+ H +I+++ + + +G D
Sbjct: 512 TISGY--GDILVSGSYDSSIRIWRVSTGECLYHLRGHSLRIYSVLYEPERNICISGSMDK 569
Query: 643 LVNLWHDST 651
+ +W ST
Sbjct: 570 SIRVWDLST 578
Score = 88 (36.0 bits), Expect = 4.0e-18, Sum P(2) = 4.0e-18
Identities = 28/92 (30%), Positives = 43/92 (46%)
Query: 116 LLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDL 175
++ T+G+ + + + G +GHK V ++ H +T L SGS D TVRVW++
Sbjct: 364 IITTSGSGT-IQIHNAITGVLEARLEGHKEGVWAVKIHENT----LVSGSIDKTVRVWNI 418
Query: 176 LAKKCVATLDKHFSRVTSMAITSDGSTLISAG 207
KC H S + + I S LI G
Sbjct: 419 EKAKCTHIFRGHISIIRCLEILVP-SRLIRHG 449
Score = 78 (32.5 bits), Expect = 4.4e-17, Sum P(2) = 4.4e-17
Identities = 21/77 (27%), Positives = 40/77 (51%)
Query: 146 VVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLIS 205
+++S+L H D + + SGS T+++ + + A L+ H V ++ I + TL+S
Sbjct: 353 MITSLLLHKD--RIITTSGS--GTIQIHNAITGVLEARLEGHKEGVWAVKIHEN--TLVS 406
Query: 206 AGRDKVVNLWDLRDYSC 222
DK V +W++ C
Sbjct: 407 GSIDKTVRVWNIEKAKC 423
>UNIPROTKB|O43660 [details] [associations]
symbol:PLRG1 "Pleiotropic regulator 1" species:9606 "Homo
sapiens" [GO:0016607 "nuclear speck" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0003714 "transcription corepressor
activity" evidence=TAS] [GO:0005634 "nucleus" evidence=TAS]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IC]
[GO:0004871 "signal transducer activity" evidence=TAS] [GO:0007165
"signal transduction" evidence=TAS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0003714 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016607
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0004871
EMBL:CH471056 GO:GO:0000398 GO:GO:0071013 CTD:5356
HOGENOM:HOG000207595 HOVERGEN:HBG053621 KO:K12862 OrthoDB:EOG4M65HB
EMBL:AF044333 EMBL:AK002108 EMBL:BC020786 EMBL:BC106004
IPI:IPI00002624 IPI:IPI00382756 RefSeq:NP_001188493.1
RefSeq:NP_002660.1 UniGene:Hs.249996 ProteinModelPortal:O43660
SMR:O43660 IntAct:O43660 MINT:MINT-2999551 STRING:O43660
PhosphoSite:O43660 PaxDb:O43660 PRIDE:O43660
Ensembl:ENST00000302078 Ensembl:ENST00000499023 GeneID:5356
KEGG:hsa:5356 UCSC:uc003iny.3 UCSC:uc003inz.3 GeneCards:GC04M155457
HGNC:HGNC:9089 HPA:HPA035932 MIM:605961 neXtProt:NX_O43660
PharmGKB:PA33416 PhylomeDB:O43660 GenomeRNAi:5356 NextBio:20762
ArrayExpress:O43660 Bgee:O43660 CleanEx:HS_PLRG1
Genevestigator:O43660 GermOnline:ENSG00000171566 Uniprot:O43660
Length = 514
Score = 240 (89.5 bits), Expect = 7.6e-21, Sum P(2) = 7.6e-21
Identities = 53/189 (28%), Positives = 87/189 (46%)
Query: 33 FIACACGESINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTL 92
F+ + +I I DL++ +K ++ G T+ + +S LFS G ++++ WDL
Sbjct: 219 FVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVIVSTRSPYLFSCGEDKQVKCWDLEYN 278
Query: 93 KCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILF 152
K +R + GH G+ HP+ +L T D +WDV H GH V+++
Sbjct: 279 KVIRHYHGHLSAVYGLDLHPTIDVLVTCSRDSTARIWDVRTKASVHTLSGHTNAVATV-- 336
Query: 153 HPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVV 212
+ + +GS D T+R+WDL+A K TL H V ++ + T S D +
Sbjct: 337 RCQAAEPQIITGSHDTTIRLWDLVAGKTRVTLTNHKKSVRAVVLHPRHYTFASGSPDNIK 396
Query: 213 NLWDLRDYS 221
W D S
Sbjct: 397 Q-WKFPDGS 404
Score = 219 (82.2 bits), Expect = 1.2e-14, P = 1.2e-14
Identities = 73/259 (28%), Positives = 108/259 (41%)
Query: 391 VLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFS 450
V++GH V C+ A+ G VTGS D ++++WD S TGH+ V V S
Sbjct: 199 VISGHLGWVRCI---AVEPGNQWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVIVS 255
Query: 451 KKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHG--KDINSLAVAPNDSL 508
+ +L S D +K W D E N K + HG + L + P +
Sbjct: 256 TR-SPYLFSCGEDKQVKCW-------DLEY--N---KVIRHYHGHLSAVYGLDLHPTIDV 302
Query: 509 VCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDG 568
+ T S+D TA +W + SV T GH + +V + +IT S D TI++W + G
Sbjct: 303 LVTCSRDSTARIWDVRTKASVHTLSGHTNAVATVRCQAAEPQIITGSHDTTIRLWDLVAG 362
Query: 569 SCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAV 628
T H SV RA L + G+ +K W G I H I L V
Sbjct: 363 KTRVTLTNHKKSV-RAVVLHPRHYTFASGSPDNIKQWKFPDGSFIQNLSGHNAIINTLTV 421
Query: 629 GKKTEMFATGGSDALVNLW 647
+ +G + ++LW
Sbjct: 422 NSDG-VLVSGADNGTMHLW 439
Score = 213 (80.0 bits), Expect = 8.5e-18, Sum P(2) = 8.5e-18
Identities = 52/192 (27%), Positives = 88/192 (45%)
Query: 56 IEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPSGG 115
I G + +A+ P ++ + R I++WDL++ K S GH G+
Sbjct: 200 ISGHLGWVRCIAVEPGNQWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVIVSTRSP 259
Query: 116 LLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDL 175
L + G D++V WD++ ++ GH V + HP D +L + S D+T R+WD+
Sbjct: 260 YLFSCGEDKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTID--VLVTCSRDSTARIWDV 317
Query: 176 LAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYEM-VEA 234
K V TL H + V ++ + +I+ D + LWDL ++T+ ++ V A
Sbjct: 318 RTKASVHTLSGHTNAVATVRCQAAEPQIITGSHDTTIRLWDLVAGKTRVTLTNHKKSVRA 377
Query: 235 VCAIPPGSAFDS 246
V P F S
Sbjct: 378 VVLHPRHYTFAS 389
Score = 183 (69.5 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 61/246 (24%), Positives = 106/246 (43%)
Query: 367 QYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLW 426
Q+ + ++++DL+S L GH V + +S+ + + +D V+ W
Sbjct: 217 QWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGV---IVSTRSPYLFSCGEDKQVKCW 273
Query: 427 DSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKA 486
D E + GH+ AV + + + LV+ S D T ++W + KA
Sbjct: 274 DLEYNKVIRHYHGHLSAVYGLDLHPTI-DVLVTCSRDSTARIWD-----------VRTKA 321
Query: 487 KA-VVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFS 545
++ H + ++ + + TGS D T +W L + VT HK+ + +V
Sbjct: 322 SVHTLSGHTNAVATVRCQAAEPQIITGSHDTTIRLWDLVAGKTRVTLTNHKKSVRAVVLH 381
Query: 546 PVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGAD-GLVKL 604
P + S D IK W DGS ++ GH ++++ + +VS GAD G + L
Sbjct: 382 PRHYTFASGSPDN-IKQWKFPDGSFIQNLSGH-NAIINTLTVNSDGVLVS-GADNGTMHL 438
Query: 605 WTVRTG 610
W RTG
Sbjct: 439 WDWRTG 444
Score = 175 (66.7 bits), Expect = 7.9e-10, P = 7.9e-10
Identities = 40/163 (24%), Positives = 66/163 (40%)
Query: 485 KAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEF 544
K V++ H + +AV P + TGS DRT +W L ++ GH + V
Sbjct: 195 KLYRVISGHLGWVRCIAVEPGNQWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVIV 254
Query: 545 SPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKL 604
S + + DK +K W + ++ + GH S+V +V+C D ++
Sbjct: 255 STRSPYLFSCGEDKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTIDVLVTCSRDSTARI 314
Query: 605 WTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLW 647
W VRT + T H + + + TG D + LW
Sbjct: 315 WDVRTKASVHTLSGHTNAVATVRCQAAEPQIITGSHDTTIRLW 357
Score = 175 (66.7 bits), Expect = 7.9e-10, P = 7.9e-10
Identities = 55/225 (24%), Positives = 95/225 (42%)
Query: 25 LVVSSDGSFIACACGES--INIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSR 82
++VS+ ++ +CGE + DL + G + L L P +L +
Sbjct: 252 VIVSTRSPYLF-SCGEDKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTIDVLVTCSRDS 310
Query: 83 EIRVWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKG 142
R+WD+ T + + GH + C + + T D + +WD+ G
Sbjct: 311 TARIWDVRTKASVHTLSGHTNAVATVRCQAAEPQIITGSHDTTIRLWDLVAGKTRVTLTN 370
Query: 143 HKGVVSSILFHPDTDKSLLF-SGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGS 201
HK V +++ HP + F SGS D ++ W + L H + + ++ + SDG
Sbjct: 371 HKKSVRAVVLHP---RHYTFASGSPD-NIKQWKFPDGSFIQNLSGHNAIINTLTVNSDG- 425
Query: 202 TLISAGRDKVVNLWDLRDYSCKLTVPTYEMVEAVCAIPPGSAFDS 246
L+S + ++LWD R T ++ V A A+ PGS DS
Sbjct: 426 VLVSGADNGTMHLWDWR------TGYNFQRVHA--AVQPGS-LDS 461
Score = 164 (62.8 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 60/257 (23%), Positives = 115/257 (44%)
Query: 312 VLPSNQGLLCVTADQQLLLYTTVEVPEKKMELILSKRLVGYNEEILDLKFLGEEEQYLAV 371
V P NQ + +AD+ + ++ ++ K++L L+ G+ + + + YL
Sbjct: 212 VEPGNQWFVTGSADRTIKIW---DLASGKLKLSLT----GHISTVRGV-IVSTRSPYLFS 263
Query: 372 ATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESR 431
+QV+ +DL GH V LD L ++VT S+D++ R+WD ++
Sbjct: 264 CGEDKQVKCWDLEYNKVIRHYHGHLSAVYGLD---LHPTIDVLVTCSRDSTARIWDVRTK 320
Query: 432 CCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVA 491
V +GH AV V + + +++GS D TI++W D ++ K + +
Sbjct: 321 ASVHTLSGHTNAVATVR-CQAAEPQIITGSHDTTIRLW--DLVAG--------KTRVTLT 369
Query: 492 AHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVV 551
H K + ++ + P +GS D W+ PD + GH I ++ + D V+
Sbjct: 370 NHKKSVRAVVLHPRHYTFASGSPDNIK-QWKFPDGSFIQNLSGHNAIINTLTVNS-DGVL 427
Query: 552 ITASGDKTIKIWSISDG 568
++ + + T+ +W G
Sbjct: 428 VSGADNGTMHLWDWRTG 444
Score = 150 (57.9 bits), Expect = 8.0e-11, Sum P(2) = 8.0e-11
Identities = 42/165 (25%), Positives = 66/165 (40%)
Query: 93 KCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILF 152
K R GH G +A P T ADR + +WD+ G GH V ++
Sbjct: 195 KLYRVISGHLGWVRCIAVEPGNQWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVIV 254
Query: 153 HPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVV 212
T LFS +D V+ WDL K + H S V + + L++ RD
Sbjct: 255 --STRSPYLFSCGEDKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTIDVLVTCSRDSTA 312
Query: 213 NLWDLRDYSCKLTVPTYEMVEAVCAIPPGSAFDSFLSSYNQQTIK 257
+WD+R + T+ + AV + +A ++ + TI+
Sbjct: 313 RIWDVRTKASVHTLSGH--TNAVATVRCQAAEPQIITGSHDTTIR 355
Score = 147 (56.8 bits), Expect = 9.0e-07, P = 9.0e-07
Identities = 57/213 (26%), Positives = 96/213 (45%)
Query: 369 LAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDS 428
L + +++D+ + + + L+GH+ V + C + +I +TGS D ++RLWD
Sbjct: 303 LVTCSRDSTARIWDVRTKASVHTLSGHTNAVATV-RCQAAEPQI--ITGSHDTTIRLWDL 359
Query: 429 ESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKA 488
+ T H +V AV + F SGS D+ IK W F D NL
Sbjct: 360 VAGKTRVTLTNHKKSVRAVVLHPRHYTF-ASGSPDN-IKQWKFP----DGSFIQNL---- 409
Query: 489 VVAAHGKDINSLAVAPNDSLVCTGSQDRTACVW--RLP---DLVSVVTFRGH---KRGIW 540
+ H IN+L V +D ++ +G+ + T +W R V G + GI+
Sbjct: 410 --SGHNAIINTLTVN-SDGVLVSGADNGTMHLWDWRTGYNFQRVHAAVQPGSLDSESGIF 466
Query: 541 SVEFSPVDQVVITASGDKTIKIWSISDGSCLKT 573
+ F + ++TA DKTIK++ D + +T
Sbjct: 467 ACAFDQSESRLLTAEADKTIKVYREDDTATEET 499
Score = 138 (53.6 bits), Expect = 8.6e-06, P = 8.6e-06
Identities = 44/204 (21%), Positives = 85/204 (41%)
Query: 34 IACACGESINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLK 93
+ C+ + I D+ + T+ G ++ + + + + + H IR+WDL K
Sbjct: 304 VTCSRDSTARIWDVRTKASVHTLSGHTNAVATVRCQAAEPQIITGSHDTTIRLWDLVAGK 363
Query: 94 CLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDV-DGGFCTHYFKGHKGVVSSILF 152
+ H + HP A+ D + W DG F + GH +++++
Sbjct: 364 TRVTLTNHKKSVRAVVLHPRHYTFASGSPDN-IKQWKFPDGSFIQN-LSGHNAIINTLTV 421
Query: 153 HPDTDKSLLFSGSDDATVRVWD---------LLAKKCVATLDKHFSRVTSMAITSDGSTL 203
+ D +L SG+D+ T+ +WD + A +LD S + + A S L
Sbjct: 422 NSD---GVLVSGADNGTMHLWDWRTGYNFQRVHAAVQPGSLDSE-SGIFACAFDQSESRL 477
Query: 204 ISAGRDKVVNLWDLRDYSCKLTVP 227
++A DK + ++ D + + T P
Sbjct: 478 LTAEADKTIKVYREDDTATEETHP 501
Score = 82 (33.9 bits), Expect = 7.6e-21, Sum P(2) = 7.6e-21
Identities = 27/106 (25%), Positives = 56/106 (52%)
Query: 392 LAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSES-----RCCVGVGTGHMGA--- 443
L+GH+ I+ +T ++S +L V+G+ + ++ LWD + R V G + +
Sbjct: 409 LSGHNAII---NTLTVNSDGVL-VSGADNGTMHLWDWRTGYNFQRVHAAVQPGSLDSESG 464
Query: 444 VGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAV 489
+ A AF + ++ L++ +D TIKV+ D + + P++ K + +
Sbjct: 465 IFACAFDQS-ESRLLTAEADKTIKVYREDDTATEETHPVSWKPEII 509
>UNIPROTKB|I3L2U8 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9606 "Homo sapiens" [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0000226 "microtubule cytoskeleton organization" evidence=IEA]
[GO:0001667 "ameboidal cell migration" evidence=IEA] [GO:0001675
"acrosome assembly" evidence=IEA] [GO:0001764 "neuron migration"
evidence=IEA] [GO:0001961 "positive regulation of cytokine-mediated
signaling pathway" evidence=IEA] [GO:0005635 "nuclear envelope"
evidence=IEA] [GO:0005813 "centrosome" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0005871 "kinesin complex" evidence=IEA]
[GO:0007097 "nuclear migration" evidence=IEA] [GO:0007268 "synaptic
transmission" evidence=IEA] [GO:0007405 "neuroblast proliferation"
evidence=IEA] [GO:0007611 "learning or memory" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] [GO:0008090
"retrograde axon cargo transport" evidence=IEA] [GO:0008344 "adult
locomotory behavior" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0010977 "negative regulation of neuron projection
development" evidence=IEA] [GO:0017145 "stem cell division"
evidence=IEA] [GO:0021766 "hippocampus development" evidence=IEA]
[GO:0021819 "layer formation in cerebral cortex" evidence=IEA]
[GO:0021895 "cerebral cortex neuron differentiation" evidence=IEA]
[GO:0030036 "actin cytoskeleton organization" evidence=IEA]
[GO:0030426 "growth cone" evidence=IEA] [GO:0031252 "cell leading
edge" evidence=IEA] [GO:0031512 "motile primary cilium"
evidence=IEA] [GO:0031982 "vesicle" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0032403
"protein complex binding" evidence=IEA] [GO:0033267 "axon part"
evidence=IEA] [GO:0036035 "osteoclast development" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0043025 "neuronal cell body" evidence=IEA] [GO:0045505 "dynein
intermediate chain binding" evidence=IEA] [GO:0045773 "positive
regulation of axon extension" evidence=IEA] [GO:0045931 "positive
regulation of mitotic cell cycle" evidence=IEA] [GO:0046329
"negative regulation of JNK cascade" evidence=IEA] [GO:0047496
"vesicle transport along microtubule" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA] [GO:0050885
"neuromuscular process controlling balance" evidence=IEA]
[GO:0051081 "nuclear envelope disassembly" evidence=IEA]
[GO:0051219 "phosphoprotein binding" evidence=IEA] [GO:0051660
"establishment of centrosome localization" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005829 GO:GO:0005635 GO:GO:0005813 GO:GO:0048471
GO:GO:0021766 GO:GO:0001764 GO:GO:0033267 GO:GO:0005871
GO:GO:0031252 GO:GO:0000226 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030036
GO:GO:0045931 GO:GO:0007268 GO:GO:0043025 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885 GO:GO:0030426
GO:GO:0007611 GO:GO:0007405 GO:GO:0008090 GO:GO:0045773
GO:GO:0001675 GO:GO:0005874 GO:GO:0032319 GO:GO:0007097
GO:GO:0021819 GO:GO:0047496 GO:GO:0010977 GO:GO:0017145
GO:GO:0031512 GO:GO:0021895 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 GO:GO:0051081
HGNC:HGNC:8574 ChiTaRS:PAFAH1B1 GO:GO:0051660 EMBL:AC015799
EMBL:AC005696 ProteinModelPortal:I3L2U8 SMR:I3L2U8
Ensembl:ENST00000573839 Bgee:I3L2U8 Uniprot:I3L2U8
Length = 345
Score = 254 (94.5 bits), Expect = 9.3e-21, P = 9.3e-21
Identities = 64/236 (27%), Positives = 104/236 (44%)
Query: 53 KSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHP 112
K + G +T + P ++ S+ I+VWD T R+ KGH ++
Sbjct: 36 KYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDH 95
Query: 113 SGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRV 172
SG LLA+ AD + +WD G C GH VSS+ P+ D + S S D T+++
Sbjct: 96 SGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDH--IVSASRDKTIKM 153
Query: 173 WDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYEMV 232
W++ CV T H V + DG+ + S D+ V +W + CK + +E V
Sbjct: 154 WEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHV 213
Query: 233 EAVCAIPPGSAFDSFLSSYNQQTIKKKRRSLEIHFITVGERG-IVRMWNADSA-CL 286
+ P S++ S + +T K + F+ G R ++MW+ + CL
Sbjct: 214 VECISWAPESSYSSISEATGSETKKSGKPG---PFLLSGSRDKTIKMWDVSTGMCL 266
Score = 240 (89.5 bits), Expect = 4.1e-18, Sum P(2) = 4.1e-18
Identities = 65/205 (31%), Positives = 92/205 (44%)
Query: 438 TGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDI 497
+GH V V F + +VS S D TIKVW ++ + D E+ LK H +
Sbjct: 40 SGHRSPVTRVIFHPVF-SVMVSASEDATIKVWDYE--TGDFER--TLKG------HTDSV 88
Query: 498 NSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGD 557
++ + L+ + S D T +W + T GH + SV P +++AS D
Sbjct: 89 QDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRD 148
Query: 558 KTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYD 617
KTIK+W + G C+KTF GH V G I SC D V++W V T EC A
Sbjct: 149 KTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELR 208
Query: 618 KHEDKI----WALAVGKKTEMFATG 638
+HE + WA + ATG
Sbjct: 209 EHEHVVECISWAPESSYSSISEATG 233
Score = 239 (89.2 bits), Expect = 7.7e-21, Sum P(2) = 7.7e-21
Identities = 46/147 (31%), Positives = 79/147 (53%)
Query: 41 SINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKG 100
+I + D + T++G +D++ ++ KLL S I++WD +C+R+ G
Sbjct: 66 TIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHG 125
Query: 101 HDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSL 160
HD +A P+G + +A D+ + +W+V G+C F GH+ V + P+ D +L
Sbjct: 126 HDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMV--RPNQDGTL 183
Query: 161 LFSGSDDATVRVWDLLAKKCVATLDKH 187
+ S S+D TVRVW + K+C A L +H
Sbjct: 184 IASCSNDQTVRVWVVATKECKAELREH 210
Score = 228 (85.3 bits), Expect = 2.0e-16, P = 2.0e-16
Identities = 73/282 (25%), Positives = 121/282 (42%)
Query: 378 VQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVG 437
++V+D + L GH++ V D SGK+L + S D +++LWD + C+
Sbjct: 67 IKVWDYETGDFERTLKGHTDSVQ--DISFDHSGKLL-ASCSADMTIKLWDFQGFECIRTM 123
Query: 438 TGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVW---------SFDGLSDDAEQPMNLKAKA 488
GH V +VA + +VS S D TIK+W +F G + +
Sbjct: 124 HGHDHNVSSVAIMPN-GDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGT 182
Query: 489 VVAAHGKD--INSLAVAPNDSLVCTGSQDRTA-CVWRLPDLVSVVTFRGHKRGIWSVEFS 545
++A+ D + VA + + C+ P+ S + G + +
Sbjct: 183 LIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPE--SSYSSISEATGSETKKSG 240
Query: 546 PVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLW 605
+++ S DKTIK+W +S G CL T GH + V F + G I+SC D +++W
Sbjct: 241 KPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVW 300
Query: 606 TVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLW 647
+ C+ T + HE + +L K TG D V +W
Sbjct: 301 DYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 342
Score = 218 (81.8 bits), Expect = 3.4e-15, P = 3.4e-15
Identities = 61/272 (22%), Positives = 119/272 (43%)
Query: 347 KRLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCA 406
+ L G+ + + D+ F + LA + ++++D C + GH V + A
Sbjct: 79 RTLKGHTDSVQDISF-DHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNV---SSVA 134
Query: 407 LSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTI 466
+ IV+ S+D ++++W+ ++ CV TGH V V ++ + S S+D T+
Sbjct: 135 IMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQD-GTLIASCSNDQTV 193
Query: 467 KVWSFDGLSDDAE-QPMNLKAKAVVAAHGKDINSLAVAPNDS---------LVCTGSQDR 516
+VW AE + + + A +S++ A + +GS+D+
Sbjct: 194 RVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDK 253
Query: 517 TACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEG 576
T +W + + ++T GH + V F + +++ + DKT+++W + C+KT
Sbjct: 254 TIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNA 313
Query: 577 HTSSVLRASFLTRGAQIVSCGADGLVKLWTVR 608
H V F +V+ D VK+W R
Sbjct: 314 HEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 345
Score = 210 (79.0 bits), Expect = 3.0e-14, P = 3.0e-14
Identities = 41/161 (25%), Positives = 75/161 (46%)
Query: 487 KAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSP 546
K ++ H + + P S++ + S+D T VW T +GH + + F
Sbjct: 36 KYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDH 95
Query: 547 VDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWT 606
+++ + S D TIK+W C++T GH +V + + G IVS D +K+W
Sbjct: 96 SGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWE 155
Query: 607 VRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLW 647
V+TG C+ T+ H + + + + + A+ +D V +W
Sbjct: 156 VQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVW 196
Score = 202 (76.2 bits), Expect = 2.6e-13, P = 2.6e-13
Identities = 44/138 (31%), Positives = 65/138 (47%)
Query: 514 QDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKT 573
Q R W +P GH+ + V F PV V+++AS D TIK+W G +T
Sbjct: 22 QKRDPKEW-IPRPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERT 80
Query: 574 FEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTE 633
+GHT SV SF G + SC AD +KLW + ECI T H+ + ++A+ +
Sbjct: 81 LKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGD 140
Query: 634 MFATGGSDALVNLWHDST 651
+ D + +W T
Sbjct: 141 HIVSASRDKTIKMWEVQT 158
Score = 170 (64.9 bits), Expect = 8.0e-12, Sum P(2) = 8.0e-12
Identities = 34/105 (32%), Positives = 53/105 (50%)
Query: 114 GGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVW 173
G L + D+ + +WDV G C GH V +LFH + + S +DD T+RVW
Sbjct: 243 GPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFH--SGGKFILSCADDKTLRVW 300
Query: 174 DLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLR 218
D K+C+ TL+ H VTS+ +++ D+ V +W+ R
Sbjct: 301 DYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 345
Score = 155 (59.6 bits), Expect = 5.4e-08, P = 5.4e-08
Identities = 38/133 (28%), Positives = 62/133 (46%)
Query: 42 INIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGH 101
+ + + S S+I + + T + P LL S + I++WD+ST CL + GH
Sbjct: 214 VECISWAPESSYSSISEATGSETKKSGKPGPFLL-SGSRDKTIKMWDVSTGMCLMTLVGH 272
Query: 102 DGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLL 161
D G+ H G + + D+ + VWD C H+ V+S+ FH +
Sbjct: 273 DNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAP--YV 330
Query: 162 FSGSDDATVRVWD 174
+GS D TV+VW+
Sbjct: 331 VTGSVDQTVKVWE 343
Score = 134 (52.2 bits), Expect = 1.0e-13, Sum P(2) = 1.0e-13
Identities = 32/140 (22%), Positives = 66/140 (47%)
Query: 31 GSFIA-CACGESINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWDL 89
G +A C+ +I + D T+ G ++++A+ P+ + S+ + I++W++
Sbjct: 97 GKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEV 156
Query: 90 STLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSS 149
T C++++ GH + + G L+A+ D+ V VW V C + H+ VV
Sbjct: 157 QTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVEC 216
Query: 150 ILFHPDTDKSLLFSGSDDAT 169
I + P++ S + + T
Sbjct: 217 ISWAPESSYSSISEATGSET 236
Score = 121 (47.7 bits), Expect = 1.0e-13, Sum P(2) = 1.0e-13
Identities = 23/70 (32%), Positives = 38/70 (54%)
Query: 161 LFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDY 220
L SGS D T+++WD+ C+ TL H + V + S G ++S DK + +WD ++
Sbjct: 246 LLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNK 305
Query: 221 SCKLTVPTYE 230
C T+ +E
Sbjct: 306 RCMKTLNAHE 315
Score = 65 (27.9 bits), Expect = 7.7e-21, Sum P(2) = 7.7e-21
Identities = 22/80 (27%), Positives = 38/80 (47%)
Query: 200 GSTLISAGRDKVVNLWDLRDYSCKLTVPTYE-MVEAVCAIPPGSAFDSFLSSYNQQTIK- 257
G L+S RDK + +WD+ C +T+ ++ V V G F LS + +T++
Sbjct: 243 GPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVL-FHSGGKF--ILSCADDKTLRV 299
Query: 258 ---KKRRSLEI-----HFIT 269
K +R ++ HF+T
Sbjct: 300 WDYKNKRCMKTLNAHEHFVT 319
Score = 63 (27.2 bits), Expect = 8.0e-12, Sum P(2) = 8.0e-12
Identities = 15/79 (18%), Positives = 36/79 (45%)
Query: 25 LVVSSDGSFIACACGE-SINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSRE 83
+ + +G I A + +I + ++ T G + + + + D L+ S + +
Sbjct: 133 VAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQT 192
Query: 84 IRVWDLSTLKCLRSWKGHD 102
+RVW ++T +C + H+
Sbjct: 193 VRVWVVATKECKAELREHE 211
Score = 37 (18.1 bits), Expect = 4.1e-18, Sum P(2) = 4.1e-18
Identities = 7/23 (30%), Positives = 10/23 (43%)
Query: 629 GKKTEMFATGGSDALVNLWHDST 651
GK +G D + +W ST
Sbjct: 240 GKPGPFLLSGSRDKTIKMWDVST 262
>UNIPROTKB|E2RI74 [details] [associations]
symbol:PLAA "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016005 "phospholipase A2 activator activity"
evidence=IEA] [GO:0006954 "inflammatory response" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 GO:GO:0006954 GO:GO:0016005
GeneTree:ENSGT00550000074944 InterPro:IPR015155 InterPro:IPR013535
Pfam:PF09070 Pfam:PF08324 PROSITE:PS51394 PROSITE:PS51396
OMA:VSECCRF EMBL:AAEX03007920 Ensembl:ENSCAFT00000002660
Uniprot:E2RI74
Length = 800
Score = 279 (103.3 bits), Expect = 7.9e-21, P = 7.9e-21
Identities = 85/272 (31%), Positives = 131/272 (48%)
Query: 386 MSCSYVLAGHSEIVLCLDTCAL-SSGKILIVTGSKDNSVRLWDSESRCCVGVG-----TG 439
+SCS L GH V L C+L G + V S+D + RLW +SR G +G
Sbjct: 10 LSCS--LPGHELDVRGL-VCSLYPPGAFVSV--SRDRTTRLWVPDSRPNRGFTEMHCMSG 64
Query: 440 HMGAVGAVAF--SKKL--QNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGK 495
H V V S + + +G +DH I ++S E P L ++ H
Sbjct: 65 HSNFVSCVCIIPSSDMYPHGLIATGGNDHNICIFSL-------ESPAPLY---ILKGHKN 114
Query: 496 DINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITAS 555
+ SL+ +L+ +GS D TA VW L D ++T +GH +W+V+ P +++T S
Sbjct: 115 TVCSLSSGKFGTLL-SGSWDTTAKVW-LNDKC-MMTLQGHTAAVWAVKILPEQGLMLTGS 171
Query: 556 GDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIAT 615
DKTIK+W G C +TF GH V + L+ A+ +SC D ++ W + TGEC+
Sbjct: 172 ADKTIKLWKA--GRCERTFSGHEDCVRGLAILSE-AEFLSCANDASIRRWQI-TGECLEV 227
Query: 616 YDKHEDKIWALAVGKKTEMFATGGSDALVNLW 647
Y H + I++++V F T D + +W
Sbjct: 228 YYGHTNYIYSISVFPNCRDFVTTAEDRSLRIW 259
Score = 151 (58.2 bits), Expect = 6.4e-07, P = 6.4e-07
Identities = 42/201 (20%), Positives = 90/201 (44%)
Query: 41 SINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKG 100
+I I L + + ++G +T+ +L+ LL S +VW L+ KC+ + +G
Sbjct: 94 NICIFSLESPAPLYILKGHKNTVCSLSSGKFGTLL-SGSWDTTAKVW-LND-KCMMTLQG 150
Query: 101 HDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSL 160
H + P GL+ T AD+ + +W G C F GH+ V + + +
Sbjct: 151 HTAAVWAVKILPEQGLMLTGSADKTIKLWKA--GRCERTFSGHEDCVRGLAILSEAE--- 205
Query: 161 LFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDY 220
S ++DA++R W + + C+ H + + S+++ + ++ D+ + +W +
Sbjct: 206 FLSCANDASIRRWQITGE-CLEVYYGHTNYIYSISVFPNCRDFVTTAEDRSLRIWKHGEC 264
Query: 221 SCKLTVPTYEMVEAVCAIPPG 241
+ + +P + + C + G
Sbjct: 265 AQTIRLPA-QSIWCCCVLDNG 284
Score = 149 (57.5 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 45/157 (28%), Positives = 77/157 (49%)
Query: 115 GLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDK-SLLFSGSDDATVRVW 173
GL+AT G D + ++ ++ + KGHK V S+ + K L SGS D T +VW
Sbjct: 84 GLIATGGNDHNICIFSLESPAPLYILKGHKNTVCSL----SSGKFGTLLSGSWDTTAKVW 139
Query: 174 DLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYEMVE 233
L KC+ TL H + V ++ I + +++ DK + LW + C+ T +E +
Sbjct: 140 --LNDKCMMTLQGHTAAVWAVKILPEQGLMLTGSADKTIKLW--KAGRCERTFSGHE--D 193
Query: 234 AVCAIPPGSAFDSFLSSYNQQTIKKKR---RSLEIHF 267
V + S + FLS N +I++ + LE+++
Sbjct: 194 CVRGLAILSEAE-FLSCANDASIRRWQITGECLEVYY 229
Score = 139 (54.0 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 34/102 (33%), Positives = 56/102 (54%)
Query: 369 LAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKI-LIVTGSKDNSVRLWD 427
+A N + ++ L S + Y+L GH V C+LSSGK +++GS D + ++W
Sbjct: 86 IATGGNDHNICIFSLESPAPLYILKGHKNTV-----CSLSSGKFGTLLSGSWDTTAKVWL 140
Query: 428 SESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVW 469
++ C+ GH AV AV + Q +++GS+D TIK+W
Sbjct: 141 NDK--CMMTLQGHTAAVWAVKILPE-QGLMLTGSADKTIKLW 179
Score = 126 (49.4 bits), Expect = 0.00032, P = 0.00032
Identities = 41/167 (24%), Positives = 72/167 (43%)
Query: 56 IEGGSDTITALALSPDDK-----LLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMAC 110
+ G S+ ++ + + P L+ + G+ I ++ L + L KGH ++
Sbjct: 62 MSGHSNFVSCVCIIPSSDMYPHGLIATGGNDHNICIFSLESPAPLYILKGHKNTVCSLSS 121
Query: 111 HPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATV 170
G LL+ + D VW D C +GH V ++ P+ + L+ +GS D T+
Sbjct: 122 GKFGTLLSGSW-DTTAKVWLNDK--CMMTLQGHTAAVWAVKILPE--QGLMLTGSADKTI 176
Query: 171 RVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDL 217
++W A +C T H V +AI S+ L S D + W +
Sbjct: 177 KLWK--AGRCERTFSGHEDCVRGLAILSEAEFL-SCANDASIRRWQI 220
Score = 116 (45.9 bits), Expect = 5.4e-09, Sum P(2) = 5.4e-09
Identities = 44/159 (27%), Positives = 70/159 (44%)
Query: 92 LKCLRSWKGHDGPAIGMAC--HPSGGLLATAGADRKVLVWDVDG----GFCT-HYFKGHK 144
L C S GH+ G+ C +P G ++ + DR +W D GF H GH
Sbjct: 10 LSC--SLPGHELDVRGLVCSLYPPGAFVSVS-RDRTTRLWVPDSRPNRGFTEMHCMSGHS 66
Query: 145 GVVSSILFHPDTDK---SLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGS 201
VS + P +D L+ +G +D + ++ L + + L H + V S++ G
Sbjct: 67 NFVSCVCIIPSSDMYPHGLIATGGNDHNICIFSLESPAPLYILKGHKNTVCSLSSGKFG- 125
Query: 202 TLISAGRDKVVNLWDLRDYSCKLTVPTYEM-VEAVCAIP 239
TL+S D +W L D C +T+ + V AV +P
Sbjct: 126 TLLSGSWDTTAKVW-LND-KCMMTLQGHTAAVWAVKILP 162
Score = 105 (42.0 bits), Expect = 5.4e-09, Sum P(2) = 5.4e-09
Identities = 41/155 (26%), Positives = 72/155 (46%)
Query: 413 LIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFD 472
L++TGS D +++LW + RC +GH V +A + + FL S ++D +I+ W
Sbjct: 166 LMLTGSADKTIKLWKA-GRC-ERTFSGHEDCVRGLAILSEAE-FL-SCANDASIRRWQIT 221
Query: 473 GLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTF 532
G + V H I S++V PN T ++DR+ +W+ + T
Sbjct: 222 G-----------ECLEVYYGHTNYIYSISVFPNCRDFVTTAEDRSLRIWKHGECAQ--TI 268
Query: 533 RGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISD 567
R + IW +V+ AS D I++++ S+
Sbjct: 269 RLPAQSIWCCCVLDNGDIVVGAS-DGIIRVFTESE 302
>WB|WBGene00006474 [details] [associations]
symbol:wdr-5.1 species:6239 "Caenorhabditis elegans"
[GO:0000003 "reproduction" evidence=IMP] [GO:0040027 "negative
regulation of vulval development" evidence=IMP] [GO:0008406 "gonad
development" evidence=IMP] [GO:0016477 "cell migration"
evidence=IMP] [GO:0006915 "apoptotic process" evidence=IMP]
[GO:0008340 "determination of adult lifespan" evidence=IMP]
[GO:0005634 "nucleus" evidence=IDA] [GO:0051568 "histone H3-K4
methylation" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0008340 GO:GO:0006915
GO:GO:0016477 GO:GO:0008406 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040027 GO:GO:0051568
EMBL:Z37139 GeneTree:ENSGT00690000101787 KO:K14963
HOGENOM:HOG000091642 OMA:KLWKSDT PIR:T19266 RefSeq:NP_497749.1
ProteinModelPortal:Q17963 SMR:Q17963 IntAct:Q17963 STRING:Q17963
PaxDb:Q17963 EnsemblMetazoa:C14B1.4 GeneID:175474
KEGG:cel:CELE_C14B1.4 CTD:175474 WormBase:C14B1.4 InParanoid:Q17963
NextBio:888320 Uniprot:Q17963
Length = 376
Score = 265 (98.3 bits), Expect = 9.7e-21, P = 9.7e-21
Identities = 53/165 (32%), Positives = 86/165 (52%)
Query: 483 NLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSV 542
N K + H K I+S +P + T S D+T +W + ++ T GHK G+ +
Sbjct: 76 NYKLMCTLEGHTKSISSAKFSPCGKYLGTSSADKTVKIWNMDHMICERTLTGHKLGVNDI 135
Query: 543 EFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLV 602
+S + V++AS DKT+KI+ I KT +GH + V +F + + +VS D V
Sbjct: 136 AWSSDSRCVVSASDDKTLKIFEIVTSRMTKTLKGHNNYVFCCNFNPQSSLVVSGSFDESV 195
Query: 603 KLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLW 647
++W V+TG CI T H D + A++ + + A+G D LV +W
Sbjct: 196 RIWDVKTGMCIKTLPAHSDPVSAVSFNRDGSLIASGSYDGLVRIW 240
Score = 249 (92.7 bits), Expect = 1.2e-18, P = 1.2e-18
Identities = 73/305 (23%), Positives = 145/305 (47%)
Query: 349 LVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALS 408
L G+ + I KF +YL ++ + V+++++ M C L GH L ++ A S
Sbjct: 83 LEGHTKSISSAKF-SPCGKYLGTSSADKTVKIWNMDHMICERTLTGHK---LGVNDIAWS 138
Query: 409 SGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKV 468
S +V+ S D ++++++ + GH V F+ + + +VSGS D ++++
Sbjct: 139 SDSRCVVSASDDKTLKIFEIVTSRMTKTLKGHNNYVFCCNFNPQ-SSLVVSGSFDESVRI 197
Query: 469 WSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVS 528
W D + M +K + AH +++++ + SL+ +GS D +W +
Sbjct: 198 W-------DVKTGMCIKT---LPAHSDPVSAVSFNRDGSLIASGSYDGLVRIWDTANGQC 247
Query: 529 VVTFRGHKRG-IWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSS--VLRAS 585
+ T + + V+FSP + ++ ++ D T+K+W S G LK + GH +S + A+
Sbjct: 248 IKTLVDDENPPVAFVKFSPNGKYILASNLDSTLKLWDFSKGKTLKQYTGHENSKYCIFAN 307
Query: 586 F-LTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGG--SDA 642
F +T G I+S D + +W ++T E + + H + A + A+G D
Sbjct: 308 FSVTGGKWIISGSEDCKIYIWNLQTREIVQCLEGHTQPVLASDCHPVQNIIASGALEPDN 367
Query: 643 LVNLW 647
+++W
Sbjct: 368 KIHIW 372
Score = 234 (87.4 bits), Expect = 7.7e-17, P = 7.7e-17
Identities = 57/211 (27%), Positives = 100/211 (47%)
Query: 48 SNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIG 107
+N + T+EG + +I++ SP K L +S + +++W++ + C R+ GH
Sbjct: 75 ANYKLMCTLEGHTKSISSAKFSPCGKYLGTSSADKTVKIWNMDHMICERTLTGHKLGVND 134
Query: 108 MACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDD 167
+A + +A D+ + ++++ T KGH V F+P + SL+ SGS D
Sbjct: 135 IAWSSDSRCVVSASDDKTLKIFEIVTSRMTKTLKGHNNYVFCCNFNPQS--SLVVSGSFD 192
Query: 168 ATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSC-KLTV 226
+VR+WD+ C+ TL H V++++ DGS + S D +V +WD + C K V
Sbjct: 193 ESVRIWDVKTGMCIKTLPAHSDPVSAVSFNRDGSLIASGSYDGLVRIWDTANGQCIKTLV 252
Query: 227 PTYEMVEAVCAIPPGSAFDSFLSSYNQQTIK 257
A P + L+S T+K
Sbjct: 253 DDENPPVAFVKFSPNGKY--ILASNLDSTLK 281
Score = 221 (82.9 bits), Expect = 2.5e-15, P = 2.5e-15
Identities = 74/332 (22%), Positives = 149/332 (44%)
Query: 280 NADSACLYEQKSSDVTISFEMDDSKRGFTAATVLPSNQGLLCVTADQQLLLYTTVEVPEK 339
N ++A S++ + ++ + ++A P + L +AD+ TV++
Sbjct: 63 NPNAAGASASGSANYKLMCTLEGHTKSISSAKFSPCGKYLGTSSADK------TVKIWNM 116
Query: 340 KMELILSKRLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIV 399
+I + L G+ + D+ + + + + A++ + ++++++ + + L GH+ V
Sbjct: 117 D-HMICERTLTGHKLGVNDIAW-SSDSRCVVSASDDKTLKIFEIVTSRMTKTLKGHNNYV 174
Query: 400 LCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVS 459
C C + L+V+GS D SVR+WD ++ C+ H V AV+F++ + + S
Sbjct: 175 FC---CNFNPQSSLVVSGSFDESVRIWDVKTGMCIKTLPAHSDPVSAVSFNRD-GSLIAS 230
Query: 460 GSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTAC 519
GS D +++W D A K +V + + +PN + + D T
Sbjct: 231 GSYDGLVRIW------DTANGQC---IKTLVDDENPPVAFVKFSPNGKYILASNLDSTLK 281
Query: 520 VWRLPDLVSVVTFRGHKRGIWSV--EFSPVD-QVVITASGDKTIKIWSISDGSCLKTFEG 576
+W ++ + GH+ + + FS + +I+ S D I IW++ ++ EG
Sbjct: 282 LWDFSKGKTLKQYTGHENSKYCIFANFSVTGGKWIISGSEDCKIYIWNLQTREIVQCLEG 341
Query: 577 HTSSVLRASFLTRGAQIVSCGA---DGLVKLW 605
HT VL AS I++ GA D + +W
Sbjct: 342 HTQPVL-ASDCHPVQNIIASGALEPDNKIHIW 372
Score = 217 (81.4 bits), Expect = 7.2e-15, P = 7.2e-15
Identities = 46/188 (24%), Positives = 92/188 (48%)
Query: 31 GSFIACACGE-SINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWDL 89
G ++ + + ++ I ++ + + T+ G + +A S D + + S+ + ++++++
Sbjct: 99 GKYLGTSSADKTVKIWNMDHMICERTLTGHKLGVNDIAWSSDSRCVVSASDDKTLKIFEI 158
Query: 90 STLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSS 149
T + ++ KGH+ +P L+ + D V +WDV G C H VS+
Sbjct: 159 VTSRMTKTLKGHNNYVFCCNFNPQSSLVVSGSFDESVRIWDVKTGMCIKTLPAHSDPVSA 218
Query: 150 ILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATL-DKHFSRVTSMAITSDGSTLISAGR 208
+ F+ D SL+ SGS D VR+WD +C+ TL D V + + +G ++++
Sbjct: 219 VSFN--RDGSLIASGSYDGLVRIWDTANGQCIKTLVDDENPPVAFVKFSPNGKYILASNL 276
Query: 209 DKVVNLWD 216
D + LWD
Sbjct: 277 DSTLKLWD 284
Score = 187 (70.9 bits), Expect = 1.8e-11, P = 1.8e-11
Identities = 49/214 (22%), Positives = 96/214 (44%)
Query: 12 CEPVLQQF-YGGGPLVVSSDGSFIACACGE-SINIVDLSNASIKSTIEGGSDTITALALS 69
CE L G + SSD + A + ++ I ++ + + T++G ++ + +
Sbjct: 121 CERTLTGHKLGVNDIAWSSDSRCVVSASDDKTLKIFEIVTSRMTKTLKGHNNYVFCCNFN 180
Query: 70 PDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVW 129
P L+ S +R+WD+ T C+++ H P ++ + G L+A+ D V +W
Sbjct: 181 PQSSLVVSGSFDESVRIWDVKTGMCIKTLPAHSDPVSAVSFNRDGSLIASGSYDGLVRIW 240
Query: 130 DVDGGFCTHYFKGHKGV-VSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKH- 187
D G C + V+ + F P+ K +L S D +T+++WD K + H
Sbjct: 241 DTANGQCIKTLVDDENPPVAFVKFSPN-GKYILASNLD-STLKLWDFSKGKTLKQYTGHE 298
Query: 188 ---FSRVTSMAITSDGSTLISAGRDKVVNLWDLR 218
+ + ++T G +IS D + +W+L+
Sbjct: 299 NSKYCIFANFSVTG-GKWIISGSEDCKIYIWNLQ 331
Score = 173 (66.0 bits), Expect = 6.6e-10, P = 6.6e-10
Identities = 49/199 (24%), Positives = 91/199 (45%)
Query: 25 LVVSSDGSFIACACGESINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREI 84
LVVS GSF ES+ I D+ T+ SD ++A++ + D L+ S + +
Sbjct: 185 LVVS--GSF-----DESVRIWDVKTGMCIKTLPAHSDPVSAVSFNRDGSLIASGSYDGLV 237
Query: 85 RVWDLSTLKCLRSWKGHDGPAIGMA-CHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGH 143
R+WD + +C+++ + P + P+G + + D + +WD G + GH
Sbjct: 238 RIWDTANGQCIKTLVDDENPPVAFVKFSPNGKYILASNLDSTLKLWDFSKGKTLKQYTGH 297
Query: 144 KGVVSSILFHPD-TDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDG-- 200
+ I + T + SGS+D + +W+L ++ V L+ H T + SD
Sbjct: 298 ENSKYCIFANFSVTGGKWIISGSEDCKIYIWNLQTREIVQCLEGH----TQPVLASDCHP 353
Query: 201 -STLISAGR---DKVVNLW 215
+I++G D +++W
Sbjct: 354 VQNIIASGALEPDNKIHIW 372
Score = 157 (60.3 bits), Expect = 4.0e-08, P = 4.0e-08
Identities = 33/121 (27%), Positives = 58/121 (47%)
Query: 531 TFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRG 590
T GH + I S +FSP + + T+S DKT+KIW++ C +T GH V ++ +
Sbjct: 82 TLEGHTKSISSAKFSPCGKYLGTSSADKTVKIWNMDHMICERTLTGHKLGVNDIAWSSDS 141
Query: 591 AQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLWHDS 650
+VS D +K++ + T T H + ++ ++ + +G D V +W
Sbjct: 142 RCVVSASDDKTLKIFEIVTSRMTKTLKGHNNYVFCCNFNPQSSLVVSGSFDESVRIWDVK 201
Query: 651 T 651
T
Sbjct: 202 T 202
>UNIPROTKB|Q17963 [details] [associations]
symbol:tag-125 "WD repeat-containing protein tag-125"
species:6239 "Caenorhabditis elegans" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0008340
GO:GO:0006915 GO:GO:0016477 GO:GO:0008406 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040027 GO:GO:0051568
EMBL:Z37139 GeneTree:ENSGT00690000101787 KO:K14963
HOGENOM:HOG000091642 OMA:KLWKSDT PIR:T19266 RefSeq:NP_497749.1
ProteinModelPortal:Q17963 SMR:Q17963 IntAct:Q17963 STRING:Q17963
PaxDb:Q17963 EnsemblMetazoa:C14B1.4 GeneID:175474
KEGG:cel:CELE_C14B1.4 CTD:175474 WormBase:C14B1.4 InParanoid:Q17963
NextBio:888320 Uniprot:Q17963
Length = 376
Score = 265 (98.3 bits), Expect = 9.7e-21, P = 9.7e-21
Identities = 53/165 (32%), Positives = 86/165 (52%)
Query: 483 NLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSV 542
N K + H K I+S +P + T S D+T +W + ++ T GHK G+ +
Sbjct: 76 NYKLMCTLEGHTKSISSAKFSPCGKYLGTSSADKTVKIWNMDHMICERTLTGHKLGVNDI 135
Query: 543 EFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLV 602
+S + V++AS DKT+KI+ I KT +GH + V +F + + +VS D V
Sbjct: 136 AWSSDSRCVVSASDDKTLKIFEIVTSRMTKTLKGHNNYVFCCNFNPQSSLVVSGSFDESV 195
Query: 603 KLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLW 647
++W V+TG CI T H D + A++ + + A+G D LV +W
Sbjct: 196 RIWDVKTGMCIKTLPAHSDPVSAVSFNRDGSLIASGSYDGLVRIW 240
Score = 249 (92.7 bits), Expect = 1.2e-18, P = 1.2e-18
Identities = 73/305 (23%), Positives = 145/305 (47%)
Query: 349 LVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALS 408
L G+ + I KF +YL ++ + V+++++ M C L GH L ++ A S
Sbjct: 83 LEGHTKSISSAKF-SPCGKYLGTSSADKTVKIWNMDHMICERTLTGHK---LGVNDIAWS 138
Query: 409 SGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKV 468
S +V+ S D ++++++ + GH V F+ + + +VSGS D ++++
Sbjct: 139 SDSRCVVSASDDKTLKIFEIVTSRMTKTLKGHNNYVFCCNFNPQ-SSLVVSGSFDESVRI 197
Query: 469 WSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVS 528
W D + M +K + AH +++++ + SL+ +GS D +W +
Sbjct: 198 W-------DVKTGMCIKT---LPAHSDPVSAVSFNRDGSLIASGSYDGLVRIWDTANGQC 247
Query: 529 VVTFRGHKRG-IWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSS--VLRAS 585
+ T + + V+FSP + ++ ++ D T+K+W S G LK + GH +S + A+
Sbjct: 248 IKTLVDDENPPVAFVKFSPNGKYILASNLDSTLKLWDFSKGKTLKQYTGHENSKYCIFAN 307
Query: 586 F-LTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGG--SDA 642
F +T G I+S D + +W ++T E + + H + A + A+G D
Sbjct: 308 FSVTGGKWIISGSEDCKIYIWNLQTREIVQCLEGHTQPVLASDCHPVQNIIASGALEPDN 367
Query: 643 LVNLW 647
+++W
Sbjct: 368 KIHIW 372
Score = 234 (87.4 bits), Expect = 7.7e-17, P = 7.7e-17
Identities = 57/211 (27%), Positives = 100/211 (47%)
Query: 48 SNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIG 107
+N + T+EG + +I++ SP K L +S + +++W++ + C R+ GH
Sbjct: 75 ANYKLMCTLEGHTKSISSAKFSPCGKYLGTSSADKTVKIWNMDHMICERTLTGHKLGVND 134
Query: 108 MACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDD 167
+A + +A D+ + ++++ T KGH V F+P + SL+ SGS D
Sbjct: 135 IAWSSDSRCVVSASDDKTLKIFEIVTSRMTKTLKGHNNYVFCCNFNPQS--SLVVSGSFD 192
Query: 168 ATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSC-KLTV 226
+VR+WD+ C+ TL H V++++ DGS + S D +V +WD + C K V
Sbjct: 193 ESVRIWDVKTGMCIKTLPAHSDPVSAVSFNRDGSLIASGSYDGLVRIWDTANGQCIKTLV 252
Query: 227 PTYEMVEAVCAIPPGSAFDSFLSSYNQQTIK 257
A P + L+S T+K
Sbjct: 253 DDENPPVAFVKFSPNGKY--ILASNLDSTLK 281
Score = 221 (82.9 bits), Expect = 2.5e-15, P = 2.5e-15
Identities = 74/332 (22%), Positives = 149/332 (44%)
Query: 280 NADSACLYEQKSSDVTISFEMDDSKRGFTAATVLPSNQGLLCVTADQQLLLYTTVEVPEK 339
N ++A S++ + ++ + ++A P + L +AD+ TV++
Sbjct: 63 NPNAAGASASGSANYKLMCTLEGHTKSISSAKFSPCGKYLGTSSADK------TVKIWNM 116
Query: 340 KMELILSKRLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIV 399
+I + L G+ + D+ + + + + A++ + ++++++ + + L GH+ V
Sbjct: 117 D-HMICERTLTGHKLGVNDIAW-SSDSRCVVSASDDKTLKIFEIVTSRMTKTLKGHNNYV 174
Query: 400 LCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVS 459
C C + L+V+GS D SVR+WD ++ C+ H V AV+F++ + + S
Sbjct: 175 FC---CNFNPQSSLVVSGSFDESVRIWDVKTGMCIKTLPAHSDPVSAVSFNRD-GSLIAS 230
Query: 460 GSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTAC 519
GS D +++W D A K +V + + +PN + + D T
Sbjct: 231 GSYDGLVRIW------DTANGQC---IKTLVDDENPPVAFVKFSPNGKYILASNLDSTLK 281
Query: 520 VWRLPDLVSVVTFRGHKRGIWSV--EFSPVD-QVVITASGDKTIKIWSISDGSCLKTFEG 576
+W ++ + GH+ + + FS + +I+ S D I IW++ ++ EG
Sbjct: 282 LWDFSKGKTLKQYTGHENSKYCIFANFSVTGGKWIISGSEDCKIYIWNLQTREIVQCLEG 341
Query: 577 HTSSVLRASFLTRGAQIVSCGA---DGLVKLW 605
HT VL AS I++ GA D + +W
Sbjct: 342 HTQPVL-ASDCHPVQNIIASGALEPDNKIHIW 372
Score = 217 (81.4 bits), Expect = 7.2e-15, P = 7.2e-15
Identities = 46/188 (24%), Positives = 92/188 (48%)
Query: 31 GSFIACACGE-SINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWDL 89
G ++ + + ++ I ++ + + T+ G + +A S D + + S+ + ++++++
Sbjct: 99 GKYLGTSSADKTVKIWNMDHMICERTLTGHKLGVNDIAWSSDSRCVVSASDDKTLKIFEI 158
Query: 90 STLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSS 149
T + ++ KGH+ +P L+ + D V +WDV G C H VS+
Sbjct: 159 VTSRMTKTLKGHNNYVFCCNFNPQSSLVVSGSFDESVRIWDVKTGMCIKTLPAHSDPVSA 218
Query: 150 ILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATL-DKHFSRVTSMAITSDGSTLISAGR 208
+ F+ D SL+ SGS D VR+WD +C+ TL D V + + +G ++++
Sbjct: 219 VSFN--RDGSLIASGSYDGLVRIWDTANGQCIKTLVDDENPPVAFVKFSPNGKYILASNL 276
Query: 209 DKVVNLWD 216
D + LWD
Sbjct: 277 DSTLKLWD 284
Score = 187 (70.9 bits), Expect = 1.8e-11, P = 1.8e-11
Identities = 49/214 (22%), Positives = 96/214 (44%)
Query: 12 CEPVLQQF-YGGGPLVVSSDGSFIACACGE-SINIVDLSNASIKSTIEGGSDTITALALS 69
CE L G + SSD + A + ++ I ++ + + T++G ++ + +
Sbjct: 121 CERTLTGHKLGVNDIAWSSDSRCVVSASDDKTLKIFEIVTSRMTKTLKGHNNYVFCCNFN 180
Query: 70 PDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVW 129
P L+ S +R+WD+ T C+++ H P ++ + G L+A+ D V +W
Sbjct: 181 PQSSLVVSGSFDESVRIWDVKTGMCIKTLPAHSDPVSAVSFNRDGSLIASGSYDGLVRIW 240
Query: 130 DVDGGFCTHYFKGHKGV-VSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKH- 187
D G C + V+ + F P+ K +L S D +T+++WD K + H
Sbjct: 241 DTANGQCIKTLVDDENPPVAFVKFSPN-GKYILASNLD-STLKLWDFSKGKTLKQYTGHE 298
Query: 188 ---FSRVTSMAITSDGSTLISAGRDKVVNLWDLR 218
+ + ++T G +IS D + +W+L+
Sbjct: 299 NSKYCIFANFSVTG-GKWIISGSEDCKIYIWNLQ 331
Score = 173 (66.0 bits), Expect = 6.6e-10, P = 6.6e-10
Identities = 49/199 (24%), Positives = 91/199 (45%)
Query: 25 LVVSSDGSFIACACGESINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREI 84
LVVS GSF ES+ I D+ T+ SD ++A++ + D L+ S + +
Sbjct: 185 LVVS--GSF-----DESVRIWDVKTGMCIKTLPAHSDPVSAVSFNRDGSLIASGSYDGLV 237
Query: 85 RVWDLSTLKCLRSWKGHDGPAIGMA-CHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGH 143
R+WD + +C+++ + P + P+G + + D + +WD G + GH
Sbjct: 238 RIWDTANGQCIKTLVDDENPPVAFVKFSPNGKYILASNLDSTLKLWDFSKGKTLKQYTGH 297
Query: 144 KGVVSSILFHPD-TDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDG-- 200
+ I + T + SGS+D + +W+L ++ V L+ H T + SD
Sbjct: 298 ENSKYCIFANFSVTGGKWIISGSEDCKIYIWNLQTREIVQCLEGH----TQPVLASDCHP 353
Query: 201 -STLISAGR---DKVVNLW 215
+I++G D +++W
Sbjct: 354 VQNIIASGALEPDNKIHIW 372
Score = 157 (60.3 bits), Expect = 4.0e-08, P = 4.0e-08
Identities = 33/121 (27%), Positives = 58/121 (47%)
Query: 531 TFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRG 590
T GH + I S +FSP + + T+S DKT+KIW++ C +T GH V ++ +
Sbjct: 82 TLEGHTKSISSAKFSPCGKYLGTSSADKTVKIWNMDHMICERTLTGHKLGVNDIAWSSDS 141
Query: 591 AQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLWHDS 650
+VS D +K++ + T T H + ++ ++ + +G D V +W
Sbjct: 142 RCVVSASDDKTLKIFEIVTSRMTKTLKGHNNYVFCCNFNPQSSLVVSGSFDESVRIWDVK 201
Query: 651 T 651
T
Sbjct: 202 T 202
>UNIPROTKB|A7Z055 [details] [associations]
symbol:PLAA "PLAA protein" species:9913 "Bos taurus"
[GO:0016005 "phospholipase A2 activator activity" evidence=IEA]
[GO:0006954 "inflammatory response" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 eggNOG:COG2319 GO:GO:0006954
GO:GO:0016005 GeneTree:ENSGT00550000074944 HOGENOM:HOG000174247
KO:K14018 InterPro:IPR015155 InterPro:IPR013535 Pfam:PF09070
Pfam:PF08324 PROSITE:PS51394 PROSITE:PS51396 CTD:9373
HOVERGEN:HBG008204 OMA:VSECCRF OrthoDB:EOG4DJJVW EMBL:DAAA02022139
EMBL:BC153253 IPI:IPI00692551 RefSeq:NP_001098805.1
UniGene:Bt.28480 STRING:A7Z055 Ensembl:ENSBTAT00000017298
GeneID:506073 KEGG:bta:506073 InParanoid:A7Z055 NextBio:20867436
Uniprot:A7Z055
Length = 796
Score = 278 (102.9 bits), Expect = 1.0e-20, P = 1.0e-20
Identities = 83/270 (30%), Positives = 131/270 (48%)
Query: 386 MSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLW--DSESRCCVGVG--TGHM 441
+SCS L+GH V L C G + V S+D + RLW +S +R + +GH
Sbjct: 10 LSCS--LSGHELDVRGLVCCLYPPGAFVSV--SRDRTTRLWVPNSPNRGFTEMHCMSGHS 65
Query: 442 GAVGAVAF--SKKL--QNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDI 497
V V S + + +G +DH I V+S E P L V+ H +
Sbjct: 66 NFVSCVCIIPSSDVYPHGLIATGGNDHNICVFSL-------ESPAPLY---VLKGHKNTV 115
Query: 498 NSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGD 557
SL+ +L+ +GS D TA VW L D ++T +GH +W+V+ P +++T S D
Sbjct: 116 CSLSSGKFGTLL-SGSWDTTAKVW-LNDKC-MMTLQGHTAAVWAVKILPEQGLMLTGSAD 172
Query: 558 KTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYD 617
KTIK+W G C +TF GH V + L+ + +SC D ++ W + TGEC+ +
Sbjct: 173 KTIKLWKA--GRCERTFSGHEDCVRGLAILSE-TEFLSCANDASIRRWQI-TGECLEVFY 228
Query: 618 KHEDKIWALAVGKKTEMFATGGSDALVNLW 647
H + I++++V + F T D + +W
Sbjct: 229 GHTNYIYSISVFPNCKDFVTTAEDRSLRIW 258
Score = 158 (60.7 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 42/201 (20%), Positives = 91/201 (45%)
Query: 41 SINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKG 100
+I + L + + ++G +T+ +L+ LL S +VW L+ KC+ + +G
Sbjct: 93 NICVFSLESPAPLYVLKGHKNTVCSLSSGKFGTLL-SGSWDTTAKVW-LND-KCMMTLQG 149
Query: 101 HDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSL 160
H + P GL+ T AD+ + +W G C F GH+ V + +T+
Sbjct: 150 HTAAVWAVKILPEQGLMLTGSADKTIKLWKA--GRCERTFSGHEDCVRGLAILSETE--- 204
Query: 161 LFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDY 220
S ++DA++R W + + C+ H + + S+++ + ++ D+ + +W +
Sbjct: 205 FLSCANDASIRRWQITGE-CLEVFYGHTNYIYSISVFPNCKDFVTTAEDRSLRIWKHGEC 263
Query: 221 SCKLTVPTYEMVEAVCAIPPG 241
+ + +P + + C + G
Sbjct: 264 AQTIRLPA-QSIWCCCVLDNG 283
Score = 149 (57.5 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 44/145 (30%), Positives = 71/145 (48%)
Query: 115 GLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDK-SLLFSGSDDATVRVW 173
GL+AT G D + V+ ++ + KGHK V S+ + K L SGS D T +VW
Sbjct: 83 GLIATGGNDHNICVFSLESPAPLYVLKGHKNTVCSL----SSGKFGTLLSGSWDTTAKVW 138
Query: 174 DLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYEMVE 233
L KC+ TL H + V ++ I + +++ DK + LW + C+ T +E +
Sbjct: 139 --LNDKCMMTLQGHTAAVWAVKILPEQGLMLTGSADKTIKLW--KAGRCERTFSGHE--D 192
Query: 234 AVCAIPPGSAFDSFLSSYNQQTIKK 258
V + S + FLS N +I++
Sbjct: 193 CVRGLAILSETE-FLSCANDASIRR 216
Score = 141 (54.7 bits), Expect = 7.6e-06, P = 7.6e-06
Identities = 36/102 (35%), Positives = 56/102 (54%)
Query: 369 LAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKI-LIVTGSKDNSVRLWD 427
+A N + V+ L S + YVL GH V C+LSSGK +++GS D + ++W
Sbjct: 85 IATGGNDHNICVFSLESPAPLYVLKGHKNTV-----CSLSSGKFGTLLSGSWDTTAKVWL 139
Query: 428 SESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVW 469
++ C+ GH AV AV + Q +++GS+D TIK+W
Sbjct: 140 NDK--CMMTLQGHTAAVWAVKILPE-QGLMLTGSADKTIKLW 178
Score = 127 (49.8 bits), Expect = 0.00025, P = 0.00025
Identities = 41/167 (24%), Positives = 73/167 (43%)
Query: 56 IEGGSDTITALALSPDDK-----LLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMAC 110
+ G S+ ++ + + P L+ + G+ I V+ L + L KGH ++
Sbjct: 61 MSGHSNFVSCVCIIPSSDVYPHGLIATGGNDHNICVFSLESPAPLYVLKGHKNTVCSLSS 120
Query: 111 HPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATV 170
G LL+ + D VW D C +GH V ++ P+ + L+ +GS D T+
Sbjct: 121 GKFGTLLSGSW-DTTAKVWLNDK--CMMTLQGHTAAVWAVKILPE--QGLMLTGSADKTI 175
Query: 171 RVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDL 217
++W A +C T H V +AI S+ + +S D + W +
Sbjct: 176 KLWK--AGRCERTFSGHEDCVRGLAILSE-TEFLSCANDASIRRWQI 219
Score = 117 (46.2 bits), Expect = 3.3e-09, Sum P(2) = 3.3e-09
Identities = 44/158 (27%), Positives = 70/158 (44%)
Query: 92 LKCLRSWKGHDGPAIGMAC--HPSGGLLATAGADRKVLVW---DVDGGFCT-HYFKGHKG 145
L C S GH+ G+ C +P G ++ + DR +W + GF H GH
Sbjct: 10 LSC--SLSGHELDVRGLVCCLYPPGAFVSVS-RDRTTRLWVPNSPNRGFTEMHCMSGHSN 66
Query: 146 VVSSILFHPDTD---KSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGST 202
VS + P +D L+ +G +D + V+ L + + L H + V S++ G T
Sbjct: 67 FVSCVCIIPSSDVYPHGLIATGGNDHNICVFSLESPAPLYVLKGHKNTVCSLSSGKFG-T 125
Query: 203 LISAGRDKVVNLWDLRDYSCKLTVPTYEM-VEAVCAIP 239
L+S D +W L D C +T+ + V AV +P
Sbjct: 126 LLSGSWDTTAKVW-LND-KCMMTLQGHTAAVWAVKILP 161
Score = 106 (42.4 bits), Expect = 3.3e-09, Sum P(2) = 3.3e-09
Identities = 41/155 (26%), Positives = 72/155 (46%)
Query: 413 LIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFD 472
L++TGS D +++LW + RC +GH V +A + + FL S ++D +I+ W
Sbjct: 165 LMLTGSADKTIKLWKA-GRC-ERTFSGHEDCVRGLAILSETE-FL-SCANDASIRRWQIT 220
Query: 473 GLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTF 532
G + V H I S++V PN T ++DR+ +W+ + T
Sbjct: 221 G-----------ECLEVFYGHTNYIYSISVFPNCKDFVTTAEDRSLRIWKHGECAQ--TI 267
Query: 533 RGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISD 567
R + IW +V+ AS D I++++ S+
Sbjct: 268 RLPAQSIWCCCVLDNGDIVVGAS-DGIIRVFTESE 301
>UNIPROTKB|B4KTK4 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7230 "Drosophila mojavensis"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016226
EMBL:CH933808 OrthoDB:EOG45DV4X RefSeq:XP_002005652.1
ProteinModelPortal:B4KTK4 EnsemblMetazoa:FBtr0169681 GeneID:6579773
KEGG:dmo:Dmoj_GI18956 FlyBase:FBgn0141695 InParanoid:B4KTK4
Uniprot:B4KTK4
Length = 331
Score = 213 (80.0 bits), Expect = 1.1e-20, Sum P(2) = 1.1e-20
Identities = 61/194 (31%), Positives = 91/194 (46%)
Query: 32 SFIACACGESINIVDLS-NASIKSTI--EGGSDTITALALSPDDKLLFSSGHSREIRVWD 88
SF +C ++I I LS N TI +G TI + SP + L S+ +W
Sbjct: 28 SFASCGEDKAIRIWSLSGNTWTTKTILSDGHKRTIREVRWSPCGEYLASASFDATTAIW- 86
Query: 89 LSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGG--F-CTHYFKGHKG 145
S +C + +GH+ ++ SGGLLAT D+ V +W+V G F C H
Sbjct: 87 -SKHECTATLEGHENEVKSVSWSRSGGLLATCSRDKSVWIWEVAGDDEFECAAVLNAHSQ 145
Query: 146 VVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKK----CVATLDKHFSRVTSMAITSDGS 201
V +++HP K +L S S D T++++ A C ATL H S V S+ +DG
Sbjct: 146 DVKRVVWHPT--KEILASASYDNTIKMYAESALDSDWDCTATLSSHTSTVWSIDFDADGE 203
Query: 202 TLISAGRDKVVNLW 215
L+S D + +W
Sbjct: 204 RLVSCSDDATLKIW 217
Score = 178 (67.7 bits), Expect = 1.2e-10, P = 1.2e-10
Identities = 49/217 (22%), Positives = 89/217 (41%)
Query: 439 GHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVA-AHGKDI 497
GH G + VA+ K +F G D I++WS G + K +++ H + I
Sbjct: 12 GHKGRIWGVAWHPKGNSFASCGE-DKAIRIWSLSGNT--------WTTKTILSDGHKRTI 62
Query: 498 NSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGD 557
+ +P + + S D T +W + + T GH+ + SV +S ++ T S D
Sbjct: 63 REVRWSPCGEYLASASFDATTAIWSKHECTA--TLEGHENEVKSVSWSRSGGLLATCSRD 120
Query: 558 KTIKIWSIS---DGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRT----G 610
K++ IW ++ + C H+ V R + + S D +K++
Sbjct: 121 KSVWIWEVAGDDEFECAAVLNAHSQDVKRVVWHPTKEILASASYDNTIKMYAESALDSDW 180
Query: 611 ECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLW 647
+C AT H +W++ E + DA + +W
Sbjct: 181 DCTATLSSHTSTVWSIDFDADGERLVSCSDDATLKIW 217
Score = 176 (67.0 bits), Expect = 2.1e-10, P = 2.1e-10
Identities = 55/219 (25%), Positives = 95/219 (43%)
Query: 419 KDNSVRLWDSESRCCVG---VGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLS 475
+D ++R+W + GH + V +S +L S S D T +WS
Sbjct: 34 EDKAIRIWSLSGNTWTTKTILSDGHKRTIREVRWSP-CGEYLASASFDATTAIWS----- 87
Query: 476 DDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLP---DLVSVVTF 532
+ A + H ++ S++ + + L+ T S+D++ +W + +
Sbjct: 88 -------KHECTATLEGHENEVKSVSWSRSGGLLATCSRDKSVWIWEVAGDDEFECAAVL 140
Query: 533 RGHKRGIWSVEFSPVDQVVITASGDKTIKIWSIS----DGSCLKTFEGHTSSVLRASFLT 588
H + + V + P +++ +AS D TIK+++ S D C T HTS+V F
Sbjct: 141 NAHSQDVKRVVWHPTKEILASASYDNTIKMYAESALDSDWDCTATLSSHTSTVWSIDFDA 200
Query: 589 RGAQIVSCGADGLVKLWTV-RTG-EC-IATYDKHEDKIW 624
G ++VSC D +K+W G E IAT DK +W
Sbjct: 201 DGERLVSCSDDATLKIWRAYHPGNEAGIATPDK--TTVW 237
Score = 174 (66.3 bits), Expect = 8.0e-16, Sum P(2) = 8.0e-16
Identities = 49/166 (29%), Positives = 78/166 (46%)
Query: 99 KGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTH---YFKGHKGVVSSILFHPD 155
+GH G G+A HP G A+ G D+ + +W + G T GHK + + + P
Sbjct: 11 QGHKGRIWGVAWHPKGNSFASCGEDKAIRIWSLSGNTWTTKTILSDGHKRTIREVRWSPC 70
Query: 156 TDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLW 215
+ L S S DAT +W +C ATL+ H + V S++ + G L + RDK V +W
Sbjct: 71 GE--YLASASFDATTAIWS--KHECTATLEGHENEVKSVSWSRSGGLLATCSRDKSVWIW 126
Query: 216 DLR---DYSCKLTVPTYEM-VEAVCAIPPGSAFDSFLSSYNQQTIK 257
++ ++ C + + V+ V P S +SY+ TIK
Sbjct: 127 EVAGDDEFECAAVLNAHSQDVKRVVWHPTKEILAS--ASYDN-TIK 169
Score = 155 (59.6 bits), Expect = 4.8e-08, P = 4.8e-08
Identities = 43/164 (26%), Positives = 69/164 (42%)
Query: 493 HGKDINSLAVAPNDSLVCTGSQDRTACVWRLPD---LVSVVTFRGHKRGIWSVEFSPVDQ 549
H I +A P + + +D+ +W L + GHKR I V +SP +
Sbjct: 13 HKGRIWGVAWHPKGNSFASCGEDKAIRIWSLSGNTWTTKTILSDGHKRTIREVRWSPCGE 72
Query: 550 VVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRT 609
+ +AS D T IWS + C T EGH + V S+ G + +C D V +W V
Sbjct: 73 YLASASFDATTAIWSKHE--CTATLEGHENEVKSVSWSRSGGLLATCSRDKSVWIWEVAG 130
Query: 610 G---ECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLWHDS 650
EC A + H + + E+ A+ D + ++ +S
Sbjct: 131 DDEFECAAVLNAHSQDVKRVVWHPTKEILASASYDNTIKMYAES 174
Score = 148 (57.2 bits), Expect = 2.9e-07, P = 2.9e-07
Identities = 34/120 (28%), Positives = 57/120 (47%)
Query: 531 TFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGS-CLKTF--EGHTSSVLRASFL 587
T +GHK IW V + P + DK I+IWS+S + KT +GH ++ +
Sbjct: 9 TLQGHKGRIWGVAWHPKGNSFASCGEDKAIRIWSLSGNTWTTKTILSDGHKRTIREVRWS 68
Query: 588 TRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLW 647
G + S D +W+ EC AT + HE+++ +++ + + AT D V +W
Sbjct: 69 PCGEYLASASFDATTAIWSKH--ECTATLEGHENEVKSVSWSRSGGLLATCSRDKSVWIW 126
Score = 129 (50.5 bits), Expect = 8.3e-10, Sum P(2) = 8.3e-10
Identities = 59/223 (26%), Positives = 95/223 (42%)
Query: 367 QYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLW 426
+YLA A+ ++ S C+ L GH V + + + S G L+ T S+D SV +W
Sbjct: 72 EYLASASFDATTAIW--SKHECTATLEGHENEVKSV-SWSRSGG--LLATCSRDKSVWIW 126
Query: 427 ----DSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPM 482
D E C V H V V + + L S S D+TIK+++ L D +
Sbjct: 127 EVAGDDEFECAA-VLNAHSQDVKRVVWHPT-KEILASASYDNTIKMYAESALDSDWD--- 181
Query: 483 NLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRL-----------PDLVSV-- 529
A +++H + S+ + + + S D T +WR PD +V
Sbjct: 182 ---CTATLSSHTSTVWSIDFDADGERLVSCSDDATLKIWRAYHPGNEAGIATPDKTTVWK 238
Query: 530 --VTFRG-HKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGS 569
T G H R I+ V + + ++ +A GD I+I+ S S
Sbjct: 239 CVCTLSGLHTRAIYDVSWCKLTGLIASACGDDAIRIFKESSDS 281
Score = 96 (38.9 bits), Expect = 1.1e-20, Sum P(2) = 1.1e-20
Identities = 43/159 (27%), Positives = 68/159 (42%)
Query: 462 SDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAP-NDSLVCTGSQDRTACV 520
S HT VWS D D E+ ++ A + A P N++ + T D+T V
Sbjct: 187 SSHTSTVWSID-FDADGERLVSCSDDATLKIWR------AYHPGNEAGIAT--PDKTT-V 236
Query: 521 WRLPDLVSVVTFRG-HKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSC--LKTFE-- 575
W+ V T G H R I+ V + + ++ +A GD I+I+ S S +FE
Sbjct: 237 WKC-----VCTLSGLHTRAIYDVSWCKLTGLIASACGDDAIRIFKESSDSKRDAPSFELL 291
Query: 576 -----GHTSSVLRASFL-TRGAQIVSCGADGLVKLWTVR 608
H V + Q++SC DG +K+W ++
Sbjct: 292 TSEESAHEQDVNAVEWNPVNVGQLISCSDDGTIKIWKLQ 330
Score = 88 (36.0 bits), Expect = 8.3e-10, Sum P(2) = 8.3e-10
Identities = 26/96 (27%), Positives = 41/96 (42%)
Query: 138 HYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVA-TL--DKHFSRVTSM 194
H +GHKG + + +HP + S G D A +R+W L T+ D H + +
Sbjct: 8 HTLQGHKGRIWGVAWHPKGN-SFASCGEDKA-IRIWSLSGNTWTTKTILSDGHKRTIREV 65
Query: 195 AITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYE 230
+ G L SA D +W + C T+ +E
Sbjct: 66 RWSPCGEYLASASFDATTAIWS--KHECTATLEGHE 99
Score = 71 (30.1 bits), Expect = 3.1e-13, Sum P(2) = 3.1e-13
Identities = 34/151 (22%), Positives = 67/151 (44%)
Query: 433 CVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDA-----EQPMNLKAK 487
C + H V ++ F + LVS S D T+K+W ++A ++ K
Sbjct: 182 CTATLSSHTSTVWSIDFDADGER-LVSCSDDATLKIWRAYHPGNEAGIATPDKTTVWKCV 240
Query: 488 AVVAA-HGKDINSLAVAPNDSLVCTGSQDRTACVWRLP-----DLVS--VVTFR--GHKR 537
++ H + I ++ L+ + D +++ D S ++T H++
Sbjct: 241 CTLSGLHTRAIYDVSWCKLTGLIASACGDDAIRIFKESSDSKRDAPSFELLTSEESAHEQ 300
Query: 538 GIWSVEFSPVDQ-VVITASGDKTIKIWSISD 567
+ +VE++PV+ +I+ S D TIKIW + +
Sbjct: 301 DVNAVEWNPVNVGQLISCSDDGTIKIWKLQE 331
Score = 61 (26.5 bits), Expect = 4.8e-17, Sum P(2) = 4.8e-17
Identities = 24/92 (26%), Positives = 42/92 (45%)
Query: 388 CSYVLAG-HSEIVLCLDTCALSSGKILIVTGSKDNSVRLW--DSESR-------CCVGVG 437
C L+G H+ + + C L+ LI + D+++R++ S+S+
Sbjct: 239 CVCTLSGLHTRAIYDVSWCKLTG---LIASACGDDAIRIFKESSDSKRDAPSFELLTSEE 295
Query: 438 TGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVW 469
+ H V AV ++ L+S S D TIK+W
Sbjct: 296 SAHEQDVNAVEWNPVNVGQLISCSDDGTIKIW 327
>UNIPROTKB|E2RR78 [details] [associations]
symbol:TAF5L "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0043966 "histone H3 acetylation"
evidence=IEA] [GO:0033276 "transcription factor TFTC complex"
evidence=IEA] [GO:0030914 "STAGA complex" evidence=IEA] [GO:0004402
"histone acetyltransferase activity" evidence=IEA] [GO:0003713
"transcription coactivator activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003713 GO:GO:0043966
GO:GO:0004402 GO:GO:0030914 GO:GO:0033276
GeneTree:ENSGT00700000104377 OMA:YVDSEGP EMBL:AAEX03002720
Ensembl:ENSCAFT00000019257 NextBio:20862231 Uniprot:E2RR78
Length = 607
Score = 264 (98.0 bits), Expect = 1.1e-20, Sum P(2) = 1.1e-20
Identities = 68/246 (27%), Positives = 114/246 (46%)
Query: 391 VLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFS 450
+L GH V A SSG +++ S+D S+R WD S + GH V + S
Sbjct: 355 ILRGHCGPVYSTRFLADSSG---LLSCSEDMSIRYWDLGSFTNTVLYQGHAYPVWDLDIS 411
Query: 451 KKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVC 510
+ SGS D T ++WSFD P+ + A H D++ + PN + +
Sbjct: 412 P-YSLYFASGSHDRTARLWSFD-----RTYPLR-----IYAGHLADVDCVKFHPNSNYLA 460
Query: 511 TGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSC 570
TGS D+T +W SV F GH+ + S+ FSP + + +A D+ +K+W ++ G+
Sbjct: 461 TGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGTL 520
Query: 571 LKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGK 630
K GHT ++ +F + I S D V++W +R C D ++ + G+
Sbjct: 521 YKELRGHTDNITSLTFSPDSSLIASASMDNSVRVWDIRNTYCSTPADGSSGELVGVYTGQ 580
Query: 631 KTEMFA 636
+ + +
Sbjct: 581 MSNVLS 586
Score = 245 (91.3 bits), Expect = 2.4e-17, P = 2.4e-17
Identities = 60/196 (30%), Positives = 92/196 (46%)
Query: 29 SDGS-FIACACGESINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSG-HSREIRV 86
+D S ++C+ SI DL + + +G + + L +SP L F+SG H R R+
Sbjct: 370 ADSSGLLSCSEDMSIRYWDLGSFTNTVLYQGHAYPVWDLDISPYS-LYFASGSHDRTARL 428
Query: 87 WDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGV 146
W LR + GH + HP+ LAT D+ V +W G F GH+G
Sbjct: 429 WSFDRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQQGNSVRLFTGHRGP 488
Query: 147 VSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISA 206
V S+ F P+ L S +D +++WDL + L H +TS+ + D S + SA
Sbjct: 489 VLSLAFSPNG--KYLASAGEDQRLKLWDLASGTLYKELRGHTDNITSLTFSPDSSLIASA 546
Query: 207 GRDKVVNLWDLRDYSC 222
D V +WD+R+ C
Sbjct: 547 SMDNSVRVWDIRNTYC 562
Score = 235 (87.8 bits), Expect = 1.9e-17, Sum P(2) = 1.9e-17
Identities = 60/236 (25%), Positives = 114/236 (48%)
Query: 347 KRLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCA 406
K L G+ + +FL + L+ + ++ ++ +DL S + + + GH+ V LD
Sbjct: 354 KILRGHCGPVYSTRFLADSSGLLSCSEDMS-IRYWDLGSFTNTVLYQGHAYPVWDLD--- 409
Query: 407 LSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTI 466
+S + +GS D + RLW + + + GH+ V V F N+L +GS+D T+
Sbjct: 410 ISPYSLYFASGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPN-SNYLATGSTDKTV 468
Query: 467 KVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDL 526
++WS A+Q +++ + H + SLA +PN + + +D+ +W L
Sbjct: 469 RLWS-------AQQGNSVR---LFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASG 518
Query: 527 VSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVL 582
RGH I S+ FSP ++ +AS D ++++W I + C +G + ++
Sbjct: 519 TLYKELRGHTDNITSLTFSPDSSLIASASMDNSVRVWDIRNTYCSTPADGSSGELV 574
Score = 232 (86.7 bits), Expect = 4.1e-17, Sum P(2) = 4.1e-17
Identities = 56/209 (26%), Positives = 89/209 (42%)
Query: 439 GHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDIN 498
GH G V + F L+S S D +I+ W ++ + H +
Sbjct: 358 GHCGPVYSTRFLADSSG-LLSCSEDMSIRYWDLGSFTNTV----------LYQGHAYPVW 406
Query: 499 SLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDK 558
L ++P +GS DRTA +W + + GH + V+F P + T S DK
Sbjct: 407 DLDISPYSLYFASGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDK 466
Query: 559 TIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDK 618
T+++WS G+ ++ F GH VL +F G + S G D +KLW + +G
Sbjct: 467 TVRLWSAQQGNSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGTLYKELRG 526
Query: 619 HEDKIWALAVGKKTEMFATGGSDALVNLW 647
H D I +L + + A+ D V +W
Sbjct: 527 HTDNITSLTFSPDSSLIASASMDNSVRVW 555
Score = 197 (74.4 bits), Expect = 4.2e-12, P = 4.2e-12
Identities = 54/185 (29%), Positives = 78/185 (42%)
Query: 34 IACACGESINIVDLSNASIKSTI-EGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTL 92
+AC E + D NA + I G + + D L S IR WDL +
Sbjct: 334 LACDILEEEDDED-DNAGTEMKILRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDLGSF 392
Query: 93 KCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILF 152
++GH P + P A+ DR +W D + + GH V + F
Sbjct: 393 TNTVLYQGHAYPVWDLDISPYSLYFASGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKF 452
Query: 153 HPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVV 212
HP+++ L +GS D TVR+W V H V S+A + +G L SAG D+ +
Sbjct: 453 HPNSN--YLATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRL 510
Query: 213 NLWDL 217
LWDL
Sbjct: 511 KLWDL 515
Score = 191 (72.3 bits), Expect = 1.9e-11, P = 1.9e-11
Identities = 38/123 (30%), Positives = 64/123 (52%)
Query: 63 ITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGA 122
+ + P+ L + + +R+W +R + GH GP + +A P+G LA+AG
Sbjct: 447 VDCVKFHPNSNYLATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLAFSPNGKYLASAGE 506
Query: 123 DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVA 182
D+++ +WD+ G +GH ++S+ F PD+ SL+ S S D +VRVWD+ C
Sbjct: 507 DQRLKLWDLASGTLYKELRGHTDNITSLTFSPDS--SLIASASMDNSVRVWDIRNTYCST 564
Query: 183 TLD 185
D
Sbjct: 565 PAD 567
Score = 181 (68.8 bits), Expect = 1.7e-11, Sum P(2) = 1.7e-11
Identities = 39/172 (22%), Positives = 74/172 (43%)
Query: 476 DDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGH 535
DD + + K ++ H + S + S + + S+D + W L + V ++GH
Sbjct: 343 DDEDDNAGTEMK-ILRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDLGSFTNTVLYQGH 401
Query: 536 KRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVS 595
+W ++ SP + S D+T ++WS L+ + GH + V F + +
Sbjct: 402 AYPVWDLDISPYSLYFASGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLAT 461
Query: 596 CGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLW 647
D V+LW+ + G + + H + +LA + A+ G D + LW
Sbjct: 462 GSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLW 513
Score = 137 (53.3 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 31/112 (27%), Positives = 54/112 (48%)
Query: 37 ACGESINIVDLSNASIKSTIE---GGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLK 93
A G + V L +A +++ G + +LA SP+ K L S+G + +++WDL++
Sbjct: 460 ATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGT 519
Query: 94 CLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKG 145
+ +GH + P L+A+A D V VWD+ +C+ G G
Sbjct: 520 LYKELRGHTDNITSLTFSPDSSLIASASMDNSVRVWDIRNTYCSTPADGSSG 571
Score = 127 (49.8 bits), Expect = 0.00017, P = 0.00017
Identities = 27/86 (31%), Positives = 45/86 (52%)
Query: 25 LVVSSDGSFIACACGES--INIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSR 82
L S +G ++A A GE + + DL++ ++ + G +D IT+L SPD L+ S+
Sbjct: 492 LAFSPNGKYLASA-GEDQRLKLWDLASGTLYKELRGHTDNITSLTFSPDSSLIASASMDN 550
Query: 83 EIRVWDLSTLKCLRSWKGHDGPAIGM 108
+RVWD+ C G G +G+
Sbjct: 551 SVRVWDIRNTYCSTPADGSSGELVGV 576
Score = 116 (45.9 bits), Expect = 2.7e-09, Sum P(2) = 2.7e-09
Identities = 35/113 (30%), Positives = 57/113 (50%)
Query: 346 SKRL-VGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDT 404
S RL G+ +L L F +YLA A ++++++DL+S + L GH++ + L
Sbjct: 478 SVRLFTGHRGPVLSLAF-SPNGKYLASAGEDQRLKLWDLASGTLYKELRGHTDNITSL-- 534
Query: 405 CALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFL 457
S LI + S DNSVR+WD + C G G + V ++ ++ N L
Sbjct: 535 -TFSPDSSLIASASMDNSVRVWDIRNTYCSTPADGSSGELVGV-YTGQMSNVL 585
Score = 105 (42.0 bits), Expect = 2.7e-09, Sum P(2) = 2.7e-09
Identities = 54/212 (25%), Positives = 86/212 (40%)
Query: 68 LSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGH--DGPAIGMACHPSGGLLATAGADRK 125
+SPD KLL + + I++W L + K L+S + H D I +AC +L +
Sbjct: 294 ISPDSKLLAAGFDNSCIKLWSLRSKK-LKS-EPHQVDVSRIHLACD----ILEEEDDE-- 345
Query: 126 VLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLD 185
D + G +GH G V S F D+ S L S S+D ++R WDL +
Sbjct: 346 ----DDNAGTEMKILRGHCGPVYSTRFLADS--SGLLSCSEDMSIRYWDLGSFTNTVLYQ 399
Query: 186 KHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYEMVEAVCA-IPPGSAF 244
H V + I+ S D+ LW D + L + + + C P S +
Sbjct: 400 GHAYPVWDLDISPYSLYFASGSHDRTARLWSF-DRTYPLRIYAGHLADVDCVKFHPNSNY 458
Query: 245 DSFLSSYNQQTIKKKRRSLEIHFITVGERGIV 276
+ S+ + ++ + T G RG V
Sbjct: 459 LATGSTDKTVRLWSAQQGNSVRLFT-GHRGPV 489
Score = 58 (25.5 bits), Expect = 1.1e-20, Sum P(2) = 1.1e-20
Identities = 12/44 (27%), Positives = 26/44 (59%)
Query: 136 CTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKK 179
C + F + ++++ PD+ LL +G D++ +++W L +KK
Sbjct: 278 CFYAFYNTEQLLNTAEISPDS--KLLAAGFDNSCIKLWSLRSKK 319
Score = 45 (20.9 bits), Expect = 9.3e-16, Sum P(2) = 9.3e-16
Identities = 10/44 (22%), Positives = 20/44 (45%)
Query: 388 CSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESR 431
C Y ++ L+T +S L+ G ++ ++LW S+
Sbjct: 278 CFYAFYNTEQL---LNTAEISPDSKLLAAGFDNSCIKLWSLRSK 318
Score = 38 (18.4 bits), Expect = 2.0e-09, Sum P(2) = 2.0e-09
Identities = 7/17 (41%), Positives = 11/17 (64%)
Query: 452 KLQNFLVSGSSDHTIKV 468
+L+NFL S H+ +V
Sbjct: 94 RLRNFLTDSDSQHSHEV 110
>POMBASE|SPBP22H7.07 [details] [associations]
symbol:prp5 "WD repeat protein Prp5" species:4896
"Schizosaccharomyces pombe" [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0005681
"spliceosomal complex" evidence=IDA] [GO:0045292 "mRNA cis
splicing, via spliceosome" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 PomBase:SPBP22H7.07
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329671 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GenomeReviews:CU329671_GR GO:GO:0005681
GO:GO:0007049 EMBL:AB004535 GO:GO:0045292 HOGENOM:HOG000207595
KO:K12862 OMA:HKKTVRA OrthoDB:EOG4QZBVP EMBL:AF251148
RefSeq:NP_595604.1 ProteinModelPortal:O13615 IntAct:O13615
STRING:O13615 EnsemblFungi:SPBP22H7.07.1 GeneID:3361260
KEGG:spo:SPBP22H7.07 NextBio:20811358 Uniprot:O13615
Length = 473
Score = 272 (100.8 bits), Expect = 1.1e-20, P = 1.1e-20
Identities = 62/183 (33%), Positives = 94/183 (51%)
Query: 33 FIACACGESINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTL 92
F A +I I DL++ +K T+ G T+ LA+SP LFS G + ++ WDL T
Sbjct: 178 FCTGAGDRTIKIWDLASGVLKLTLTGHIATVRGLAVSPRHPYLFSCGEDKMVKCWDLETN 237
Query: 93 KCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILF 152
K +R + GH + HP+ +L TAG D VWD+ H GHK V+S+
Sbjct: 238 KVIRHYHGHLSGVYALKLHPTLDVLVTAGRDAVARVWDMRTRQNVHVLSGHKSTVASLAV 297
Query: 153 HPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVV 212
+ D ++ +GS D+T+R+WDL A K + TL H V ++++ D T S D +
Sbjct: 298 Q-EFDPQVV-TGSMDSTIRLWDLAAGKTLTTLTHHKKTVRALSLHPDEFTFASGSSDNIK 355
Query: 213 NLW 215
+ W
Sbjct: 356 H-W 357
Score = 230 (86.0 bits), Expect = 5.7e-16, P = 5.7e-16
Identities = 74/290 (25%), Positives = 123/290 (42%)
Query: 360 KFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSK 419
+ GE + L T EQ++ + + V++GH V C+D + G TG+
Sbjct: 127 RIAGESQASLVKRTLAEQIRPEWHAPWTLMRVISGHLGWVRCVD---VEPGNQWFCTGAG 183
Query: 420 DNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAE 479
D ++++WD S TGH+ V +A S + +L S D +K W D E
Sbjct: 184 DRTIKIWDLASGVLKLTLTGHIATVRGLAVSPR-HPYLFSCGEDKMVKCW-------DLE 235
Query: 480 QPMNLKAKAVVAAHG--KDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKR 537
N K + HG + +L + P ++ T +D A VW + +V GHK
Sbjct: 236 T--N---KVIRHYHGHLSGVYALKLHPTLDVLVTAGRDAVARVWDMRTRQNVHVLSGHKS 290
Query: 538 GIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCG 597
+ S+ D V+T S D TI++W ++ G L T H +V RA L + G
Sbjct: 291 TVASLAVQEFDPQVVTGSMDSTIRLWDLAAGKTLTTLTHHKKTV-RALSLHPDEFTFASG 349
Query: 598 ADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLW 647
+ +K W G + ++ H + L++ MF+ G + + W
Sbjct: 350 SSDNIKHWKFPEGAFMGNFEGHNAIVNTLSINSDNVMFS-GADNGSMCFW 398
Score = 204 (76.9 bits), Expect = 4.3e-13, P = 4.3e-13
Identities = 76/307 (24%), Positives = 127/307 (41%)
Query: 51 SIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMAC 110
++ I G + + + P ++ + R I++WDL++ + GH G+A
Sbjct: 154 TLMRVISGHLGWVRCVDVEPGNQWFCTGAGDRTIKIWDLASGVLKLTLTGHIATVRGLAV 213
Query: 111 HPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATV 170
P L + G D+ V WD++ ++ GH V ++ HP D +L + DA
Sbjct: 214 SPRHPYLFSCGEDKMVKCWDLETNKVIRHYHGHLSGVYALKLHPTLD--VLVTAGRDAVA 271
Query: 171 RVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYE 230
RVWD+ ++ V L H S V S+A+ +++ D + LWDL T+ ++
Sbjct: 272 RVWDMRTRQNVHVLSGHKSTVASLAVQEFDPQVVTGSMDSTIRLWDLAAGKTLTTLTHHK 331
Query: 231 M-VEAVCAIPPGSAFDSFLSSYNQQTIKKKRRSL----EIHFITVGERGI----VRMWNA 281
V A+ P F S SS N + K + E H V I V A
Sbjct: 332 KTVRALSLHPDEFTFASG-SSDNIKHWKFPEGAFMGNFEGHNAIVNTLSINSDNVMFSGA 390
Query: 282 D--SACLYEQKSSDVTISFEMD------DSKRGFTAATVLPSNQGLLCVTADQQLLLYTT 333
D S C ++ KS + DS+ G A++ + L+ AD+ + +Y
Sbjct: 391 DNGSMCFWDWKSGHKYQELQSVVQPGSLDSEAGIFASSFDKTGLRLITCEADKSVKIYKQ 450
Query: 334 VE--VPE 338
V+ PE
Sbjct: 451 VDNATPE 457
Score = 165 (63.1 bits), Expect = 8.4e-09, P = 8.4e-09
Identities = 67/289 (23%), Positives = 122/289 (42%)
Query: 344 ILSKRLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLD 403
+L L G+ + L + YL + V+ +DL + GH V L
Sbjct: 196 VLKLTLTGHIATVRGLA-VSPRHPYLFSCGEDKMVKCWDLETNKVIRHYHGHLSGVYALK 254
Query: 404 TCALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSD 463
L ++VT +D R+WD +R V V +GH V ++A ++ +V+GS D
Sbjct: 255 ---LHPTLDVLVTAGRDAVARVWDMRTRQNVHVLSGHKSTVASLAV-QEFDPQVVTGSMD 310
Query: 464 HTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRL 523
TI++W D A K + H K + +L++ P++ +GS D W+
Sbjct: 311 STIRLW------DLAAG----KTLTTLTHHKKTVRALSLHPDEFTFASGSSDNIKH-WKF 359
Query: 524 PDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFE-----GHT 578
P+ + F GH + ++ + D V+ + + + ++ W G + + G
Sbjct: 360 PEGAFMGNFEGHNAIVNTLSINS-DNVMFSGADNGSMCFWDWKSGHKYQELQSVVQPGSL 418
Query: 579 SS---VLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIW 624
S + +SF G ++++C AD VK++ AT + H + W
Sbjct: 419 DSEAGIFASSFDKTGLRLITCEADKSVKIYKQVDN---ATPETHPNLPW 464
>WB|WBGene00022119 [details] [associations]
symbol:Y71F9AL.17 species:6239 "Caenorhabditis elegans"
[GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0030117
"membrane coat" evidence=IEA] [GO:0030126 "COPI vesicle coat"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0040010 "positive
regulation of growth rate" evidence=IMP] [GO:0002119 "nematode
larval development" evidence=IMP] [GO:0032940 "secretion by cell"
evidence=IMP] [GO:0006915 "apoptotic process" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006692
InterPro:IPR010714 InterPro:IPR011041 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 Pfam:PF06957 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0009792 GO:GO:0040010
GO:GO:0006915 GO:GO:0006886 GO:GO:0003824 GO:GO:0002119
GO:GO:0032940 GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005198 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040011 GO:GO:0000003
GO:GO:0008152 GO:GO:0030126 EMBL:FO081777 HOGENOM:HOG000195913
KO:K05236 InterPro:IPR016391 PIRSF:PIRSF003354
GeneTree:ENSGT00600000084501 OMA:YDQHNPF SUPFAM:SSF50952
RefSeq:NP_491069.1 ProteinModelPortal:Q9N4H7 SMR:Q9N4H7
DIP:DIP-24621N IntAct:Q9N4H7 MINT:MINT-1075577 STRING:Q9N4H7
PaxDb:Q9N4H7 EnsemblMetazoa:Y71F9AL.17 GeneID:171860
KEGG:cel:CELE_Y71F9AL.17 UCSC:Y71F9AL.17 CTD:171860
WormBase:Y71F9AL.17 InParanoid:Q9N4H7 NextBio:873005 Uniprot:Q9N4H7
Length = 1232
Score = 195 (73.7 bits), Expect = 2.5e-14, Sum P(2) = 2.5e-14
Identities = 56/219 (25%), Positives = 101/219 (46%)
Query: 377 QVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGV 436
+++V++ C + L GH + + T I++ S D +VR+W+ +SR + +
Sbjct: 76 KIKVWNYKQKRCIFTLLGHLDYIR---TTFFHHKYPWIISASDDQTVRIWNWQSRNSIAI 132
Query: 437 GTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGL----------------SDDAE- 479
TGH V F ++ + S S D T++VW GL AE
Sbjct: 133 LTGHNHYVMCAQFHPT-EDLVASASLDQTVRVWDISGLRKKQMPGGGAPSRPTGGQQAEL 191
Query: 480 --QPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVS--VVTFRGH 535
QP + K V+ H + +N +A + ++ +GS DR +WR + + + + RGH
Sbjct: 192 FGQP-DAVVKHVLEGHDRGVNWVAFHHTNPILVSGSDDRQVKIWRYNETKAWELDSCRGH 250
Query: 536 KRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTF 574
+ SV F P ++++ S DK+I++W + + L F
Sbjct: 251 YNNVSSVIFHPNADLILSNSEDKSIRVWDMQKRTSLHVF 289
Score = 190 (71.9 bits), Expect = 1.2e-20, Sum P(2) = 1.2e-20
Identities = 45/167 (26%), Positives = 71/167 (42%)
Query: 51 SIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMAC 110
S+ E S + ++ P + +S HS I++WD L + HDGP G+
Sbjct: 2 SLLIKFESKSARVKGISFHPTRPWVLTSLHSGVIQLWDYRMCVLLEKFDEHDGPVRGICF 61
Query: 111 HPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATV 170
H + + G D K+ VW+ C GH + + FH + S SDD TV
Sbjct: 62 HHDQPIFVSGGDDYKIKVWNYKQKRCIFTLLGHLDYIRTTFFHHKYP--WIISASDDQTV 119
Query: 171 RVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDL 217
R+W+ ++ +A L H V + SA D+ V +WD+
Sbjct: 120 RIWNWQSRNSIAILTGHNHYVMCAQFHPTEDLVASASLDQTVRVWDI 166
Score = 145 (56.1 bits), Expect = 1.2e-20, Sum P(2) = 1.2e-20
Identities = 35/136 (25%), Positives = 62/136 (45%)
Query: 511 TGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSC 570
TG Q A ++ PD V GH RG+ V F + ++++ S D+ +KIW ++
Sbjct: 184 TGGQQ--AELFGQPDAVVKHVLEGHDRGVNWVAFHHTNPILVSGSDDRQVKIWRYNETKA 241
Query: 571 --LKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAV 628
L + GH ++V F I+S D +++W ++ + + ++ W LA
Sbjct: 242 WELDSCRGHYNNVSSVIFHPNADLILSNSEDKSIRVWDMQKRTSLHVFRHENERFWVLAA 301
Query: 629 GKKTEMFATGGSDALV 644
MFA G + +V
Sbjct: 302 HPSLNMFAAGHDNGMV 317
Score = 140 (54.3 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 43/187 (22%), Positives = 86/187 (45%)
Query: 34 IACACGESINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLK 93
I+ + +++ I + + + + + G + + P + L+ S+ + +RVWD+S L+
Sbjct: 111 ISASDDQTVRIWNWQSRNSIAILTGHNHYVMCAQFHPTEDLVASASLDQTVRVWDISGLR 170
Query: 94 CLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFH 153
+ G P+ P+GG A +V H +GH V+ + FH
Sbjct: 171 -KKQMPGGGAPS-----RPTGGQQAELFGQPDAVV--------KHVLEGHDRGVNWVAFH 216
Query: 154 PDTDKSLLFSGSDDATVRVWDLLAKKC--VATLDKHFSRVTSMAITSDGSTLISAGRDKV 211
T+ +L SGSDD V++W K + + H++ V+S+ + ++S DK
Sbjct: 217 -HTNP-ILVSGSDDRQVKIWRYNETKAWELDSCRGHYNNVSSVIFHPNADLILSNSEDKS 274
Query: 212 VNLWDLR 218
+ +WD++
Sbjct: 275 IRVWDMQ 281
Score = 137 (53.3 bits), Expect = 3.6e-05, P = 3.6e-05
Identities = 40/155 (25%), Positives = 67/155 (43%)
Query: 414 IVTGSKDNSVRLWDSESRCCVGVGT--GHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSF 471
++T ++LWD R CV + H G V + F Q VSG D+ IKVW++
Sbjct: 26 VLTSLHSGVIQLWDY--RMCVLLEKFDEHDGPVRGICFHHD-QPIFVSGGDDYKIKVWNY 82
Query: 472 DGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVT 531
+Q + + H I + + + S D+T +W S+
Sbjct: 83 -------KQK---RCIFTLLGHLDYIRTTFFHHKYPWIISASDDQTVRIWNWQSRNSIAI 132
Query: 532 FRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSIS 566
GH + +F P + +V +AS D+T+++W IS
Sbjct: 133 LTGHNHYVMCAQFHPTEDLVASASLDQTVRVWDIS 167
Score = 122 (48.0 bits), Expect = 3.0e-18, Sum P(2) = 3.0e-18
Identities = 35/140 (25%), Positives = 66/140 (47%)
Query: 480 QPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVS--VVTFRGHKR 537
QP + K V+ H + +N +A + ++ +GS DR +WR + + + + RGH
Sbjct: 194 QP-DAVVKHVLEGHDRGVNWVAFHHTNPILVSGSDDRQVKIWRYNETKAWELDSCRGHYN 252
Query: 538 GIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCG 597
+ SV F P ++++ S DK+I++W + + L F H + + + G
Sbjct: 253 NVSSVIFHPNADLILSNSEDKSIRVWDMQKRTSLHVFR-HENERFWVLAAHPSLNMFAAG 311
Query: 598 AD-GLV--KLWTVRTGECIA 614
D G+V K+ R C++
Sbjct: 312 HDNGMVVFKIQRERPAYCVS 331
Score = 118 (46.6 bits), Expect = 5.4e-13, Sum P(2) = 5.4e-13
Identities = 27/114 (23%), Positives = 54/114 (47%)
Query: 413 LIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFD 472
+ V+G D +++W+ + + C+ GH+ + F K +++S S D T+++W++
Sbjct: 67 IFVSGGDDYKIKVWNYKQKRCIFTLLGHLDYIRTTFFHHKYP-WIISASDDQTVRIWNW- 124
Query: 473 GLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDL 526
Q N + A++ H + P + LV + S D+T VW + L
Sbjct: 125 -------QSRN--SIAILTGHNHYVMCAQFHPTEDLVASASLDQTVRVWDISGL 169
Score = 104 (41.7 bits), Expect = 2.2e-16, Sum P(2) = 2.2e-16
Identities = 29/108 (26%), Positives = 47/108 (43%)
Query: 439 GHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDIN 498
GH V VAF LVSGS D +K+W ++ + L + H +++
Sbjct: 205 GHDRGVNWVAFHHT-NPILVSGSDDRQVKIWRYN-----ETKAWELDS---CRGHYNNVS 255
Query: 499 SLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSP 546
S+ PN L+ + S+D++ VW + S+ FR W + P
Sbjct: 256 SVIFHPNADLILSNSEDKSIRVWDMQKRTSLHVFRHENERFWVLAAHP 303
Score = 91 (37.1 bits), Expect = 5.0e-15, Sum P(2) = 5.0e-15
Identities = 38/152 (25%), Positives = 67/152 (44%)
Query: 373 TNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWD-SESR 431
T +Q +++ +VL GH V + A ++V+GS D V++W +E++
Sbjct: 184 TGGQQAELFGQPDAVVKHVLEGHDRGV---NWVAFHHTNPILVSGSDDRQVKIWRYNETK 240
Query: 432 CC-VGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVV 490
+ GH V +V F + ++S S D +I+VW + + V+
Sbjct: 241 AWELDSCRGHYNNVSSVIFHPNA-DLILSNSEDKSIRVWDMQKRTSLHVFRHENERFWVL 299
Query: 491 AAHGKDINSLAVAPNDSLVCTGSQ-DRTA-CV 520
AAH +N A ++ +V Q +R A CV
Sbjct: 300 AAH-PSLNMFAAGHDNGMVVFKIQRERPAYCV 330
Score = 79 (32.9 bits), Expect = 2.5e-14, Sum P(2) = 2.5e-14
Identities = 18/87 (20%), Positives = 34/87 (39%)
Query: 140 FKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSD 199
F+ V I FHP + + + +++WD + D+H V + D
Sbjct: 7 FESKSARVKGISFHPT--RPWVLTSLHSGVIQLWDYRMCVLLEKFDEHDGPVRGICFHHD 64
Query: 200 GSTLISAGRDKVVNLWDLRDYSCKLTV 226
+S G D + +W+ + C T+
Sbjct: 65 QPIFVSGGDDYKIKVWNYKQKRCIFTL 91
Score = 40 (19.1 bits), Expect = 9.5e-10, Sum P(2) = 9.5e-10
Identities = 50/248 (20%), Positives = 98/248 (39%)
Query: 247 FLSSYNQQTIKKKRRSLEIHFITVGERGIVRM--WNADSACLYEQKSSDVTISFEMDDSK 304
F + ++ T+ R LEI T E V+ W+ DS LY + I + ++
Sbjct: 506 FAALLSKHTLTLVNRKLEI-LCTQQESTRVKSGAWDDDSVFLYTTSNH---IKYAINSGD 561
Query: 305 RGFTAATVLP----SNQG--LLCVTADQQLLLYTTVEVP----EKKMEL-ILSKRLVGYN 353
G LP + +G L C+ D T VEVP + K +L +++KR+
Sbjct: 562 CGIVRTLDLPLYILAIRGNVLYCLNRDA-----TPVEVPIDNSDYKFKLALINKRI---- 612
Query: 354 EEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKIL 413
+E++++ L + I ++ ++ +V + L ++ C + +I
Sbjct: 613 DEVVNMV----RSANLVGQSIIGYLEKKGYPEIALHFVKDEKTRFGLAIE-CG--NLEIA 665
Query: 414 IVTGSKDNSVRLWDSESRCCVGVGTGH---MGAVGAVAFSKKLQNFLVSGSSDHTIKVWS 470
+ K + +W++ + G M F K + V+G++D +K+
Sbjct: 666 LEAAKKLDEPAVWEALGETALLQGNHQIVEMSYQRTKNFEKLSFLYFVTGNTDKLVKMMK 725
Query: 471 FDGLSDDA 478
+DA
Sbjct: 726 IAQARNDA 733
>UNIPROTKB|G4MWF1 [details] [associations]
symbol:MGG_08345 "Uncharacterized protein" species:242507
"Magnaporthe oryzae 70-15" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 EMBL:CM001232
KO:K03361 RefSeq:XP_003715718.1 EnsemblFungi:MGG_08345T0
GeneID:2678612 KEGG:mgr:MGG_08345 Uniprot:G4MWF1
Length = 1033
Score = 209 (78.6 bits), Expect = 4.8e-13, P = 4.8e-13
Identities = 75/297 (25%), Positives = 131/297 (44%)
Query: 345 LSKRLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCL-- 402
L ++L G+ + L++ G L + V+V+D+ C+ V GH+ V CL
Sbjct: 686 LRQKLEGHEGGVWALQYEGNT---LVSGSTDRSVRVWDIEKGLCTQVFYGHTSTVRCLQI 742
Query: 403 --------DTCA---LSSGKILIVTGSKDNSVRLW---DSESRCCVGVGTGH-------- 440
DT +S K LI+TGS+D+ +R+W ++ SR + G
Sbjct: 743 LMPTEVGSDTEGRPIMSPPKPLIITGSRDSQLRVWRLPEAGSRRYIQTGPPANDAECPYF 802
Query: 441 ----MGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKD 496
G +V + LVSGS D +++VW EQ L+ H +
Sbjct: 803 LRILQGHTHSVRAISAHADTLVSGSYDCSVRVWRIS----TGEQLHWLQG------HSQK 852
Query: 497 INSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASG 556
+ S+ + + +GS D +W L + T GH + ++ D+ +++A+
Sbjct: 853 VYSVVLDHKRNRCISGSMDSLVKIWDLETGACLYTLEGHSLLVGLLDLR--DERLVSAAA 910
Query: 557 DKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECI 613
D T++IW +G C HT+++ F +++S G++ VK+W + TGECI
Sbjct: 911 DSTLRIWDPENGKCKSILTAHTAAI--TCFQHDSRKVIS-GSEKTVKMWDIATGECI 964
Score = 206 (77.6 bits), Expect = 1.0e-12, P = 1.0e-12
Identities = 73/277 (26%), Positives = 123/277 (44%)
Query: 393 AGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKK 452
A H V+ TC L + I+TGS D + ++D+ + GH G V A+ +
Sbjct: 650 AAHPRHVI---TC-LQFDEDKIITGSDDQLIHVYDTNTGKLRQKLEGHEGGVWALQYEG- 704
Query: 453 LQNFLVSGSSDHTIKVWSFD-GLSDDA--EQPMNLKAKAVVAAH--GKDINSLAV-APND 506
N LVSGS+D +++VW + GL ++ ++ G D + +P
Sbjct: 705 --NTLVSGSTDRSVRVWDIEKGLCTQVFYGHTSTVRCLQILMPTEVGSDTEGRPIMSPPK 762
Query: 507 SLVCTGSQDRTACVWRLPDLVS---VVT-----------FRGHKRG-IWSVE-FSPVDQV 550
L+ TGS+D VWRLP+ S + T F +G SV S
Sbjct: 763 PLIITGSRDSQLRVWRLPEAGSRRYIQTGPPANDAECPYFLRILQGHTHSVRAISAHADT 822
Query: 551 VITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTG 610
+++ S D ++++W IS G L +GH+ V + + +S D LVK+W + TG
Sbjct: 823 LVSGSYDCSVRVWRISTGEQLHWLQGHSQKVYSVVLDHKRNRCISGSMDSLVKIWDLETG 882
Query: 611 ECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLW 647
C+ T + H + L + + E + +D+ + +W
Sbjct: 883 ACLYTLEGHSLLVGLLDL--RDERLVSAAADSTLRIW 917
Score = 190 (71.9 bits), Expect = 1.2e-20, Sum P(2) = 1.2e-20
Identities = 55/206 (26%), Positives = 95/206 (46%)
Query: 457 LVSGSSDHTIKVWSFDGL-----------SDDAEQPMNLKAKAVVAAHGKDINSLAVAPN 505
+++GS D ++VW ++DAE P L+ ++ H + +++ A
Sbjct: 765 IITGSRDSQLRVWRLPEAGSRRYIQTGPPANDAECPYFLR---ILQGHTHSVRAIS-AHA 820
Query: 506 DSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSI 565
D+LV +GS D + VWR+ + +GH + ++SV I+ S D +KIW +
Sbjct: 821 DTLV-SGSYDCSVRVWRISTGEQLHWLQGHSQKVYSVVLDHKRNRCISGSMDSLVKIWDL 879
Query: 566 SDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWA 625
G+CL T EGH S+L R ++VS AD +++W G+C + H I
Sbjct: 880 ETGACLYTLEGH--SLLVGLLDLRDERLVSAAADSTLRIWDPENGKCKSILTAHTAAITC 937
Query: 626 LAVGKKTEMFATGGSDALVNLWHDST 651
+ + GS+ V +W +T
Sbjct: 938 FQHDSRKVI---SGSEKTVKMWDIAT 960
Score = 175 (66.7 bits), Expect = 2.3e-09, P = 2.3e-09
Identities = 44/167 (26%), Positives = 76/167 (45%)
Query: 56 IEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPSGG 115
++G + ++ A++ D L S + +RVW +ST + L +GH +
Sbjct: 806 LQGHTHSVRAISAHADT--LVSGSYDCSVRVWRISTGEQLHWLQGHSQKVYSVVLDHKRN 863
Query: 116 LLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDL 175
+ D V +WD++ G C + +GH +V + D L S + D+T+R+WD
Sbjct: 864 RCISGSMDSLVKIWDLETGACLYTLEGHSLLVGLL----DLRDERLVSAAADSTLRIWDP 919
Query: 176 LAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSC 222
KC + L H + +T D +IS G +K V +WD+ C
Sbjct: 920 ENGKCKSILTAHTAAIT--CFQHDSRKVIS-GSEKTVKMWDIATGEC 963
Score = 154 (59.3 bits), Expect = 4.2e-07, P = 4.2e-07
Identities = 56/191 (29%), Positives = 82/191 (42%)
Query: 57 EGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMAC------ 110
E GSDT +SP L+ + ++RVW L R + PA C
Sbjct: 747 EVGSDTEGRPIMSPPKPLIITGSRDSQLRVWRLPEAGS-RRYIQTGPPANDAECPYFLRI 805
Query: 111 -----HPSGGLLATA-----GA-DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKS 159
H + A A G+ D V VW + G H+ +GH V S++ D ++
Sbjct: 806 LQGHTHSVRAISAHADTLVSGSYDCSVRVWRISTGEQLHWLQGHSQKVYSVVL--DHKRN 863
Query: 160 LLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRD 219
SGS D+ V++WDL C+ TL+ H S + + D L+SA D + +WD +
Sbjct: 864 RCISGSMDSLVKIWDLETGACLYTLEGH-SLLVGLLDLRD-ERLVSAAADSTLRIWDPEN 921
Query: 220 YSCK--LTVPT 228
CK LT T
Sbjct: 922 GKCKSILTAHT 932
Score = 144 (55.7 bits), Expect = 5.1e-06, P = 5.1e-06
Identities = 44/181 (24%), Positives = 81/181 (44%)
Query: 41 SINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKG 100
S+ + +S ++G S + ++ L S +++WDL T CL + +G
Sbjct: 831 SVRVWRISTGEQLHWLQGHSQKVYSVVLDHKRNRCISGSMDSLVKIWDLETGACLYTLEG 890
Query: 101 HDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSL 160
H +G+ L +A AD + +WD + G C H ++ F D+ K
Sbjct: 891 HS-LLVGLL-DLRDERLVSAAADSTLRIWDPENGKCKSILTAHTAAITC--FQHDSRK-- 944
Query: 161 LFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISA-GRDKVVNLWDLRD 219
+ SGS+ TV++WD+ +C+ L S V + DG ++A RD + + ++ D
Sbjct: 945 VISGSEK-TVKMWDIATGECIEDLLTDLSGVWQVKF--DGRRCVAAVQRDGLTYI-EILD 1000
Query: 220 Y 220
+
Sbjct: 1001 F 1001
Score = 143 (55.4 bits), Expect = 1.2e-20, Sum P(2) = 1.2e-20
Identities = 42/127 (33%), Positives = 61/127 (48%)
Query: 63 ITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGA 122
IT L +DK++ S + I V+D +T K + +GH+G A G L +
Sbjct: 657 ITCLQFD-EDKIITGSD-DQLIHVYDTNTGKLRQKLEGHEGGV--WALQYEGNTLVSGST 712
Query: 123 DRKVLVWDVDGGFCTHYFKGHKGVVSSI-LFHP-----DTD--------KSLLFSGSDDA 168
DR V VWD++ G CT F GH V + + P DT+ K L+ +GS D+
Sbjct: 713 DRSVRVWDIEKGLCTQVFYGHTSTVRCLQILMPTEVGSDTEGRPIMSPPKPLIITGSRDS 772
Query: 169 TVRVWDL 175
+RVW L
Sbjct: 773 QLRVWRL 779
Score = 131 (51.2 bits), Expect = 2.6e-14, Sum P(2) = 2.6e-14
Identities = 42/167 (25%), Positives = 75/167 (44%)
Query: 378 VQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVG 437
V+V+ +S+ + L GHS+ V + L + ++GS D+ V++WD E+ C+
Sbjct: 832 VRVWRISTGEQLHWLQGHSQKVYSV---VLDHKRNRCISGSMDSLVKIWDLETGACLYTL 888
Query: 438 TGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDI 497
GH VG + + LVS ++D T+++W P N K K+++ AH I
Sbjct: 889 EGHSLLVGLLDLRDER---LVSAAADSTLRIWD----------PENGKCKSILTAHTAAI 935
Query: 498 NSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEF 544
+DS ++T +W + + G+W V+F
Sbjct: 936 TCFQ---HDSRKVISGSEKTVKMWDIATGECIEDLLTDLSGVWQVKF 979
Score = 120 (47.3 bits), Expect = 3.6e-13, Sum P(2) = 3.6e-13
Identities = 54/199 (27%), Positives = 87/199 (43%)
Query: 406 ALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHT 465
A+S+ +V+GS D SVR+W + + GH V +V K +N +SGS D
Sbjct: 815 AISAHADTLVSGSYDCSVRVWRISTGEQLHWLQGHSQKVYSVVLDHK-RNRCISGSMDSL 873
Query: 466 IKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPD 525
+K+W D E L + H + L + D + + + D T +W P+
Sbjct: 874 VKIW-------DLETGACLYT---LEGHSLLVGLLDL--RDERLVSAAADSTLRIWD-PE 920
Query: 526 ---LVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVL 582
S++T H I F + VI+ S +KT+K+W I+ G C++ S V
Sbjct: 921 NGKCKSILT--AHTAAITC--FQHDSRKVISGS-EKTVKMWDIATGECIEDLLTDLSGVW 975
Query: 583 RASFLTRGAQIVSCGADGL 601
+ F R + + DGL
Sbjct: 976 QVKFDGRRC-VAAVQRDGL 993
Score = 101 (40.6 bits), Expect = 2.9e-16, Sum P(2) = 2.9e-16
Identities = 27/84 (32%), Positives = 43/84 (51%)
Query: 140 FKGH-KGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITS 198
F H + V++ + F D DK + +GSDD + V+D K L+ H V A+
Sbjct: 649 FAAHPRHVITCLQF--DEDK--IITGSDDQLIHVYDTNTGKLRQKLEGHEGGV--WALQY 702
Query: 199 DGSTLISAGRDKVVNLWDLRDYSC 222
+G+TL+S D+ V +WD+ C
Sbjct: 703 EGNTLVSGSTDRSVRVWDIEKGLC 726
Score = 97 (39.2 bits), Expect = 7.6e-16, Sum P(2) = 7.6e-16
Identities = 25/80 (31%), Positives = 39/80 (48%)
Query: 117 LATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLL 176
+ T D+ + V+D + G +GH+G V ++ + +T L SGS D +VRVWD+
Sbjct: 667 IITGSDDQLIHVYDTNTGKLRQKLEGHEGGVWALQYEGNT----LVSGSTDRSVRVWDIE 722
Query: 177 AKKCVATLDKHFSRVTSMAI 196
C H S V + I
Sbjct: 723 KGLCTQVFYGHTSTVRCLQI 742
Score = 92 (37.4 bits), Expect = 2.5e-15, Sum P(2) = 2.5e-15
Identities = 26/80 (32%), Positives = 36/80 (45%)
Query: 365 EEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVR 424
+E + ++ + + VYD ++ L GH V L G L V+GS D SVR
Sbjct: 663 DEDKIITGSDDQLIHVYDTNTGKLRQKLEGHEGGVWALQY----EGNTL-VSGSTDRSVR 717
Query: 425 LWDSESRCCVGVGTGHMGAV 444
+WD E C V GH V
Sbjct: 718 VWDIEKGLCTQVFYGHTSTV 737
>RGD|621047 [details] [associations]
symbol:Plrg1 "pleiotropic regulator 1" species:10116 "Rattus
norvegicus" [GO:0006397 "mRNA processing" evidence=IEA] [GO:0008380
"RNA splicing" evidence=IEA] [GO:0016607 "nuclear speck"
evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA;ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:621047 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016607
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397
GO:GO:0071013 CTD:5356 GeneTree:ENSGT00700000104496
HOGENOM:HOG000207595 HOVERGEN:HBG053621 KO:K12862 OrthoDB:EOG4M65HB
EMBL:AF128241 EMBL:BC087742 IPI:IPI00203832 RefSeq:NP_068525.1
UniGene:Rn.44181 ProteinModelPortal:Q9WUC8 STRING:Q9WUC8
PRIDE:Q9WUC8 Ensembl:ENSRNOT00000009113 GeneID:60376 KEGG:rno:60376
UCSC:RGD:621047 InParanoid:Q9WUC8 NextBio:612055
Genevestigator:Q9WUC8 GermOnline:ENSRNOG00000006655 Uniprot:Q9WUC8
Length = 514
Score = 237 (88.5 bits), Expect = 1.3e-20, Sum P(2) = 1.3e-20
Identities = 52/187 (27%), Positives = 86/187 (45%)
Query: 33 FIACACGESINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTL 92
F+ + +I I DL++ +K ++ G T+ + +S LFS G ++++ WDL
Sbjct: 219 FVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVIVSTRSPYLFSCGEDKQVKCWDLEYN 278
Query: 93 KCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILF 152
K +R + GH G+ HP+ +L T D +WDV H GH V+++
Sbjct: 279 KVIRHYHGHLSAVYGLDLHPTIDVLVTCSRDSTARIWDVRTKASVHTLSGHTNAVATV-- 336
Query: 153 HPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVV 212
+ + +GS D T+R+WDL+A K TL H V ++ + T S D +
Sbjct: 337 RCQAAEPQIITGSHDTTIRLWDLVAGKTRVTLTNHKKSVRAVVLHPLHYTFASGSPDNIK 396
Query: 213 NLWDLRD 219
W D
Sbjct: 397 Q-WKFPD 402
Score = 218 (81.8 bits), Expect = 1.5e-14, P = 1.5e-14
Identities = 74/259 (28%), Positives = 109/259 (42%)
Query: 391 VLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFS 450
V++GH V C+ A+ G VTGS D ++++WD S TGH+ V V S
Sbjct: 199 VISGHLGWVRCI---AVEPGNQWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVIVS 255
Query: 451 KKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHG--KDINSLAVAPNDSL 508
+ +L S D +K W D E N K + HG + L + P +
Sbjct: 256 TR-SPYLFSCGEDKQVKCW-------DLEY--N---KVIRHYHGHLSAVYGLDLHPTIDV 302
Query: 509 VCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDG 568
+ T S+D TA +W + SV T GH + +V + +IT S D TI++W + G
Sbjct: 303 LVTCSRDSTARIWDVRTKASVHTLSGHTNAVATVRCQAAEPQIITGSHDTTIRLWDLVAG 362
Query: 569 SCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAV 628
T H SV RA L + G+ +K W G I H I LAV
Sbjct: 363 KTRVTLTNHKKSV-RAVVLHPLHYTFASGSPDNIKQWKFPDGGFIQNLSGHNAIINTLAV 421
Query: 629 GKKTEMFATGGSDALVNLW 647
+ +G + ++LW
Sbjct: 422 NTDG-VLVSGADNGTMHLW 439
Score = 212 (79.7 bits), Expect = 8.6e-18, Sum P(2) = 8.6e-18
Identities = 52/192 (27%), Positives = 88/192 (45%)
Query: 56 IEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPSGG 115
I G + +A+ P ++ + R I++WDL++ K S GH G+
Sbjct: 200 ISGHLGWVRCIAVEPGNQWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVIVSTRSP 259
Query: 116 LLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDL 175
L + G D++V WD++ ++ GH V + HP D +L + S D+T R+WD+
Sbjct: 260 YLFSCGEDKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTID--VLVTCSRDSTARIWDV 317
Query: 176 LAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYEM-VEA 234
K V TL H + V ++ + +I+ D + LWDL ++T+ ++ V A
Sbjct: 318 RTKASVHTLSGHTNAVATVRCQAAEPQIITGSHDTTIRLWDLVAGKTRVTLTNHKKSVRA 377
Query: 235 VCAIPPGSAFDS 246
V P F S
Sbjct: 378 VVLHPLHYTFAS 389
Score = 186 (70.5 bits), Expect = 4.9e-11, P = 4.9e-11
Identities = 62/246 (25%), Positives = 106/246 (43%)
Query: 367 QYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLW 426
Q+ + ++++DL+S L GH V + +S+ + + +D V+ W
Sbjct: 217 QWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGV---IVSTRSPYLFSCGEDKQVKCW 273
Query: 427 DSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKA 486
D E + GH+ AV + + + LV+ S D T ++W + KA
Sbjct: 274 DLEYNKVIRHYHGHLSAVYGLDLHPTI-DVLVTCSRDSTARIWD-----------VRTKA 321
Query: 487 KA-VVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFS 545
++ H + ++ + + TGS D T +W L + VT HK+ + +V
Sbjct: 322 SVHTLSGHTNAVATVRCQAAEPQIITGSHDTTIRLWDLVAGKTRVTLTNHKKSVRAVVLH 381
Query: 546 PVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGAD-GLVKL 604
P+ + S D IK W DG ++ GH + + + T G +VS GAD G + L
Sbjct: 382 PLHYTFASGSPDN-IKQWKFPDGGFIQNLSGHNAIINTLAVNTDGV-LVS-GADNGTMHL 438
Query: 605 WTVRTG 610
W RTG
Sbjct: 439 WDWRTG 444
Score = 175 (66.7 bits), Expect = 7.9e-10, P = 7.9e-10
Identities = 40/163 (24%), Positives = 66/163 (40%)
Query: 485 KAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEF 544
K V++ H + +AV P + TGS DRT +W L ++ GH + V
Sbjct: 195 KLYRVISGHLGWVRCIAVEPGNQWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVIV 254
Query: 545 SPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKL 604
S + + DK +K W + ++ + GH S+V +V+C D ++
Sbjct: 255 STRSPYLFSCGEDKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTIDVLVTCSRDSTARI 314
Query: 605 WTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLW 647
W VRT + T H + + + TG D + LW
Sbjct: 315 WDVRTKASVHTLSGHTNAVATVRCQAAEPQIITGSHDTTIRLW 357
Score = 170 (64.9 bits), Expect = 2.8e-09, P = 2.8e-09
Identities = 54/224 (24%), Positives = 94/224 (41%)
Query: 25 LVVSSDGSFIACACGES--INIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSR 82
++VS+ ++ +CGE + DL + G + L L P +L +
Sbjct: 252 VIVSTRSPYLF-SCGEDKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTIDVLVTCSRDS 310
Query: 83 EIRVWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKG 142
R+WD+ T + + GH + C + + T D + +WD+ G
Sbjct: 311 TARIWDVRTKASVHTLSGHTNAVATVRCQAAEPQIITGSHDTTIRLWDLVAGKTRVTLTN 370
Query: 143 HKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGST 202
HK V +++ HP SGS D ++ W + L H + + ++A+ +DG
Sbjct: 371 HKKSVRAVVLHPL--HYTFASGSPD-NIKQWKFPDGGFIQNLSGHNAIINTLAVNTDG-V 426
Query: 203 LISAGRDKVVNLWDLRDYSCKLTVPTYEMVEAVCAIPPGSAFDS 246
L+S + ++LWD R T ++ V A A+ PGS DS
Sbjct: 427 LVSGADNGTMHLWDWR------TGYNFQRVHA--AVQPGS-LDS 461
Score = 161 (61.7 bits), Expect = 2.7e-08, P = 2.7e-08
Identities = 60/257 (23%), Positives = 115/257 (44%)
Query: 312 VLPSNQGLLCVTADQQLLLYTTVEVPEKKMELILSKRLVGYNEEILDLKFLGEEEQYLAV 371
V P NQ + +AD+ + ++ ++ K++L L+ G+ + + + YL
Sbjct: 212 VEPGNQWFVTGSADRTIKIW---DLASGKLKLSLT----GHISTVRGV-IVSTRSPYLFS 263
Query: 372 ATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESR 431
+QV+ +DL GH V LD L ++VT S+D++ R+WD ++
Sbjct: 264 CGEDKQVKCWDLEYNKVIRHYHGHLSAVYGLD---LHPTIDVLVTCSRDSTARIWDVRTK 320
Query: 432 CCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVA 491
V +GH AV V + + +++GS D TI++W D ++ K + +
Sbjct: 321 ASVHTLSGHTNAVATVR-CQAAEPQIITGSHDTTIRLW--DLVAG--------KTRVTLT 369
Query: 492 AHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVV 551
H K + ++ + P +GS D W+ PD + GH I ++ + D V+
Sbjct: 370 NHKKSVRAVVLHPLHYTFASGSPDNIK-QWKFPDGGFIQNLSGHNAIINTLAVN-TDGVL 427
Query: 552 ITASGDKTIKIWSISDG 568
++ + + T+ +W G
Sbjct: 428 VSGADNGTMHLWDWRTG 444
Score = 150 (57.9 bits), Expect = 6.3e-11, Sum P(2) = 6.3e-11
Identities = 42/165 (25%), Positives = 66/165 (40%)
Query: 93 KCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILF 152
K R GH G +A P T ADR + +WD+ G GH V ++
Sbjct: 195 KLYRVISGHLGWVRCIAVEPGNQWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVIV 254
Query: 153 HPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVV 212
T LFS +D V+ WDL K + H S V + + L++ RD
Sbjct: 255 --STRSPYLFSCGEDKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTIDVLVTCSRDSTA 312
Query: 213 NLWDLRDYSCKLTVPTYEMVEAVCAIPPGSAFDSFLSSYNQQTIK 257
+WD+R + T+ + AV + +A ++ + TI+
Sbjct: 313 RIWDVRTKASVHTLSGH--TNAVATVRCQAAEPQIITGSHDTTIR 355
Score = 140 (54.3 bits), Expect = 5.3e-06, P = 5.3e-06
Identities = 56/203 (27%), Positives = 91/203 (44%)
Query: 369 LAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDS 428
L + +++D+ + + + L+GH+ V + C + +I +TGS D ++RLWD
Sbjct: 303 LVTCSRDSTARIWDVRTKASVHTLSGHTNAVATV-RCQAAEPQI--ITGSHDTTIRLWDL 359
Query: 429 ESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKA 488
+ T H +V AV F SGS D+ IK W F D NL
Sbjct: 360 VAGKTRVTLTNHKKSVRAVVLHPLHYTF-ASGSPDN-IKQWKFP----DGGFIQNL---- 409
Query: 489 VVAAHGKDINSLAVAPNDSLVCTGSQDRTACVW--RLP---DLVSVVTFRGH---KRGIW 540
+ H IN+LAV D ++ +G+ + T +W R V G + GI+
Sbjct: 410 --SGHNAIINTLAVN-TDGVLVSGADNGTMHLWDWRTGYNFQRVHAAVQPGSLDSESGIF 466
Query: 541 SVEFSPVDQVVITASGDKTIKIW 563
+ F + ++TA DKTIK++
Sbjct: 467 ACAFDRSESRLLTAEADKTIKVY 489
Score = 83 (34.3 bits), Expect = 1.3e-20, Sum P(2) = 1.3e-20
Identities = 27/106 (25%), Positives = 57/106 (53%)
Query: 392 LAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSES-----RCCVGVGTGHMGA--- 443
L+GH+ I+ +T A+++ +L V+G+ + ++ LWD + R V G + +
Sbjct: 409 LSGHNAII---NTLAVNTDGVL-VSGADNGTMHLWDWRTGYNFQRVHAAVQPGSLDSESG 464
Query: 444 VGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAV 489
+ A AF + ++ L++ +D TIKV+ D + + P++ K + +
Sbjct: 465 IFACAFDRS-ESRLLTAEADKTIKVYREDETATEETHPVSWKPEII 509
>UNIPROTKB|F1RKU4 [details] [associations]
symbol:WDR61 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:2001162 "positive regulation of histone H3-K79
methylation" evidence=IEA] [GO:0080182 "histone H3-K4
trimethylation" evidence=IEA] [GO:0055087 "Ski complex"
evidence=IEA] [GO:0051571 "positive regulation of histone H3-K4
methylation" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0045638 "negative regulation of myeloid cell differentiation"
evidence=IEA] [GO:0035327 "transcriptionally active chromatin"
evidence=IEA] [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=IEA]
[GO:0016593 "Cdc73/Paf1 complex" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327
GO:GO:0051571 GO:GO:0032968 GO:GO:0080182 GO:GO:0016593
GO:GO:0045638 GO:GO:2001162 GeneTree:ENSGT00700000104507
GO:GO:0055087 EMBL:CU467054 Ensembl:ENSSSCT00000001963 OMA:PPSEVWG
Uniprot:F1RKU4
Length = 287
Score = 237 (88.5 bits), Expect = 1.6e-20, Sum P(2) = 1.6e-20
Identities = 67/227 (29%), Positives = 109/227 (48%)
Query: 422 SVRLWDSES-RCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQ 480
SVRLWD E+ + + G + A +AFS Q +L +G+ H KV F S E
Sbjct: 69 SVRLWDLENGKQIKSIDAGPVDA-WTLAFSPDSQ-YLATGT--HVGKVNIFGVESGKKEY 124
Query: 481 PMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIW 540
++ + GK I S+A +P+ + +G+ D ++ + + T GH I
Sbjct: 125 SLDTR--------GKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIR 176
Query: 541 SVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADG 600
S+ FSP Q+++TAS D IKI+ + + T GH S VL +F VS +D
Sbjct: 177 SLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDK 236
Query: 601 LVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLW 647
VK+W V T C+ T+ H+D++W + + G D ++++
Sbjct: 237 SVKVWDVGTRTCVHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHIY 283
Score = 223 (83.6 bits), Expect = 2.0e-17, P = 2.0e-17
Identities = 55/193 (28%), Positives = 93/193 (48%)
Query: 25 LVVSSDGSFIACACGES-INIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSRE 83
L S D ++A +NI + + + +++ I ++A SPD K L S
Sbjct: 94 LAFSPDSQYLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGI 153
Query: 84 IRVWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGH 143
I ++D++T K L + +GH P + P LL TA D + ++DV GH
Sbjct: 154 INIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGH 213
Query: 144 KGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTL 203
V ++ F PD D + S S D +V+VWD+ + CV T H +V + +GS +
Sbjct: 214 ASWVLNVAFCPD-DTHFV-SSSSDKSVKVWDVGTRTCVHTFFDHQDQVWGVKYNGNGSKI 271
Query: 204 ISAGRDKVVNLWD 216
+S G D+ ++++D
Sbjct: 272 VSVGDDQEIHIYD 284
Score = 210 (79.0 bits), Expect = 1.0e-15, P = 1.0e-15
Identities = 54/183 (29%), Positives = 89/183 (48%)
Query: 41 SINIVDLSNAS-IKSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWK 99
S+ + DL N IKS G D T LA SPD + L + H ++ ++ + + K S
Sbjct: 69 SVRLWDLENGKQIKSIDAGPVDAWT-LAFSPDSQYLATGTHVGKVNIFGVESGKKEYSLD 127
Query: 100 GHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKS 159
+ +A P G LA+ D + ++D+ G H +GH + S+ F PD+
Sbjct: 128 TRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQ-- 185
Query: 160 LLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRD 219
LL + SDD ++++D+ TL H S V ++A D + +S+ DK V +WD+
Sbjct: 186 LLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGT 245
Query: 220 YSC 222
+C
Sbjct: 246 RTC 248
Score = 157 (60.3 bits), Expect = 2.5e-08, Sum P(2) = 2.5e-08
Identities = 49/200 (24%), Positives = 93/200 (46%)
Query: 365 EEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALS-SGKILIVTGSKDNSV 423
+ QYLA T++ +V ++ + S Y L + +L + A S GK L +G+ D +
Sbjct: 99 DSQYLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSI---AYSPDGKYL-ASGAIDGII 154
Query: 424 RLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMN 483
++D + + GH + ++ FS Q LV+ S D IK++ Q N
Sbjct: 155 NIFDIATGKLLHTLEGHAMPIRSLTFSPDSQ-LLVTASDDGYIKIYDV--------QHAN 205
Query: 484 LKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVE 543
L ++ H + ++A P+D+ + S D++ VW + V TF H+ +W V+
Sbjct: 206 LAG--TLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCVHTFFDHQDQVWGVK 263
Query: 544 FSPVDQVVITASGDKTIKIW 563
++ +++ D+ I I+
Sbjct: 264 YNGNGSKIVSVGDDQEIHIY 283
Score = 139 (54.0 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 49/217 (22%), Positives = 87/217 (40%)
Query: 451 KKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAA------HGKDINS----- 499
K+ +V+GS D +KVW + D + + VV+ +GK I S
Sbjct: 29 KENSETVVTGSLDDLVKVWKWRDEKLDLQWSLEGHQLGVVSVRLWDLENGKQIKSIDAGP 88
Query: 500 -----LAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITA 554
LA +P+ + TG+ ++ + + + I S+ +SP + + +
Sbjct: 89 VDAWTLAFSPDSQYLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASG 148
Query: 555 SGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIA 614
+ D I I+ I+ G L T EGH + +F +V+ DG +K++ V+
Sbjct: 149 AIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAG 208
Query: 615 TYDKHEDKIWALAVGKKTEMFATGGSDALVNLWHDST 651
T H + +A F + SD V +W T
Sbjct: 209 TLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGT 245
Score = 39 (18.8 bits), Expect = 1.6e-20, Sum P(2) = 1.6e-20
Identities = 6/21 (28%), Positives = 12/21 (57%)
Query: 199 DGSTLISAGRDKVVNLWDLRD 219
+ T+++ D +V +W RD
Sbjct: 31 NSETVVTGSLDDLVKVWKWRD 51
>UNIPROTKB|F1SP81 [details] [associations]
symbol:PLAA "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0016005 "phospholipase A2 activator activity"
evidence=IEA] [GO:0006954 "inflammatory response" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 GO:GO:0006954 GO:GO:0016005
GeneTree:ENSGT00550000074944 InterPro:IPR015155 InterPro:IPR013535
Pfam:PF09070 Pfam:PF08324 PROSITE:PS51394 PROSITE:PS51396
OMA:VSECCRF EMBL:CU313306 EMBL:CU915318 Ensembl:ENSSSCT00000005651
Uniprot:F1SP81
Length = 804
Score = 276 (102.2 bits), Expect = 1.7e-20, P = 1.7e-20
Identities = 84/272 (30%), Positives = 131/272 (48%)
Query: 386 MSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLW--DSESRCCVGVG--TGHM 441
+SCS L GH V L C G + V S+D + RLW DS +R + +GH
Sbjct: 14 LSCS--LPGHELDVRGLVCCLYPPGAFVSV--SRDRTTRLWVPDSPNRGFTEMHCMSGHS 69
Query: 442 GAVGAVAF--SKKL--QNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDI 497
V V S + + +G +DH I ++S E P L V+ H +
Sbjct: 70 NFVSCVCIIPSSDMYPHGLIATGGNDHNICIFSL-------ESPAPLY---VLKGHKNTV 119
Query: 498 NSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGD 557
SL+ +L+ +GS D TA VW L D ++T +GH +W+V+ P +++T S D
Sbjct: 120 CSLSSGKFGTLL-SGSWDTTAKVW-LNDKC-MMTLQGHTAAVWAVKILPEQGLMLTGSAD 176
Query: 558 KTIKIWSISDGSCLKTFE--GHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIAT 615
KTIK+W G C +TF GH V + L+ + +SC D ++ W + TGEC+
Sbjct: 177 KTIKLWKA--GRCERTFSDIGHEDCVRGLAILSE-TEFLSCANDASIRKWQI-TGECLEV 232
Query: 616 YDKHEDKIWALAVGKKTEMFATGGSDALVNLW 647
+ H + I++++V + F T G D + +W
Sbjct: 233 FYGHTNYIYSISVFPNCKDFVTTGEDRSLRIW 264
Score = 154 (59.3 bits), Expect = 3.0e-07, P = 3.0e-07
Identities = 44/203 (21%), Positives = 92/203 (45%)
Query: 41 SINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKG 100
+I I L + + ++G +T+ +L+ LL S +VW L+ KC+ + +G
Sbjct: 97 NICIFSLESPAPLYVLKGHKNTVCSLSSGKFGTLL-SGSWDTTAKVW-LND-KCMMTLQG 153
Query: 101 HDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFK--GHKGVVSSILFHPDTDK 158
H + P GL+ T AD+ + +W G C F GH+ V + +T+
Sbjct: 154 HTAAVWAVKILPEQGLMLTGSADKTIKLWKA--GRCERTFSDIGHEDCVRGLAILSETE- 210
Query: 159 SLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLR 218
S ++DA++R W + + C+ H + + S+++ + ++ G D+ + +W
Sbjct: 211 --FLSCANDASIRKWQITGE-CLEVFYGHTNYIYSISVFPNCKDFVTTGEDRSLRIWKHG 267
Query: 219 DYSCKLTVPTYEMVEAVCAIPPG 241
+ + + +P + + C + G
Sbjct: 268 ECAQTIRLPA-QSIWCCCVLNNG 289
Score = 149 (57.5 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 43/145 (29%), Positives = 69/145 (47%)
Query: 115 GLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDK-SLLFSGSDDATVRVW 173
GL+AT G D + ++ ++ + KGHK V S+ + K L SGS D T +VW
Sbjct: 87 GLIATGGNDHNICIFSLESPAPLYVLKGHKNTVCSL----SSGKFGTLLSGSWDTTAKVW 142
Query: 174 DLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYEMVE 233
L KC+ TL H + V ++ I + +++ DK + LW + C+ T +
Sbjct: 143 --LNDKCMMTLQGHTAAVWAVKILPEQGLMLTGSADKTIKLW--KAGRCERTFSDIGHED 198
Query: 234 AVCAIPPGSAFDSFLSSYNQQTIKK 258
V + S + FLS N +I+K
Sbjct: 199 CVRGLAILSETE-FLSCANDASIRK 222
Score = 140 (54.3 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 35/102 (34%), Positives = 56/102 (54%)
Query: 369 LAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKI-LIVTGSKDNSVRLWD 427
+A N + ++ L S + YVL GH V C+LSSGK +++GS D + ++W
Sbjct: 89 IATGGNDHNICIFSLESPAPLYVLKGHKNTV-----CSLSSGKFGTLLSGSWDTTAKVWL 143
Query: 428 SESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVW 469
++ C+ GH AV AV + Q +++GS+D TIK+W
Sbjct: 144 NDK--CMMTLQGHTAAVWAVKILPE-QGLMLTGSADKTIKLW 182
Score = 37 (18.1 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 6/13 (46%), Positives = 9/13 (69%)
Query: 267 FITVGERGIVRMW 279
F+T GE +R+W
Sbjct: 252 FVTTGEDRSLRIW 264
>TAIR|locus:2179300 [details] [associations]
symbol:TAF5 "AT5G25150" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0000394 "RNA
splicing, via endonucleolytic cleavage and ligation" evidence=RCA]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=RCA] [GO:0007062 "sister chromatid cohesion" evidence=RCA]
[GO:0007131 "reciprocal meiotic recombination" evidence=RCA]
[GO:0033044 "regulation of chromosome organization" evidence=RCA]
[GO:0042138 "meiotic DNA double-strand break formation"
evidence=RCA] [GO:0045132 "meiotic chromosome segregation"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003743 KO:K03130 HOGENOM:HOG000212424 OMA:CATISED
EMBL:AY463620 IPI:IPI00525851 RefSeq:NP_197897.3 UniGene:At.43447
ProteinModelPortal:Q6S7B0 SMR:Q6S7B0 IntAct:Q6S7B0 STRING:Q6S7B0
PaxDb:Q6S7B0 PRIDE:Q6S7B0 EnsemblPlants:AT5G25150.1 GeneID:832586
KEGG:ath:AT5G25150 TAIR:At5g25150 InParanoid:Q6S7B0
PhylomeDB:Q6S7B0 ProtClustDB:CLSN2681648 ArrayExpress:Q6S7B0
Genevestigator:Q6S7B0 Uniprot:Q6S7B0
Length = 669
Score = 263 (97.6 bits), Expect = 1.7e-20, Sum P(2) = 1.7e-20
Identities = 66/240 (27%), Positives = 105/240 (43%)
Query: 409 SGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKV 468
SG + S D S+ R + GH G V + FS +F++S S+D TI++
Sbjct: 389 SGALQAENDSSDQSI---GPNGRRSYTLLLGHSGPVYSATFSPP-GDFVLSSSADTTIRL 444
Query: 469 WSFDGLSDDAEQPMNLKAKAVV-AAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLV 527
WS L A V H + +P + S DRTA +W + +
Sbjct: 445 WS-----------TKLNANLVCYKGHNYPVWDAQFSPFGHYFASCSHDRTARIWSMDRIQ 493
Query: 528 SVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFL 587
+ GH + V++ P + T S DKT+++W + G C++ F GH S VL +
Sbjct: 494 PLRIMAGHLSDVDCVQWHPNCNYIATGSSDKTVRLWDVQTGECVRIFIGHRSMVLSLAMS 553
Query: 588 TRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLW 647
G + S DG + +W + T CI H +W+L+ + + A+G +D V LW
Sbjct: 554 PDGRYMASGDEDGTIMMWDLSTARCITPLMGHNSCVWSLSYSGEGSLLASGSADCTVKLW 613
Score = 256 (95.2 bits), Expect = 1.8e-18, P = 1.8e-18
Identities = 62/200 (31%), Positives = 96/200 (48%)
Query: 28 SSDGSFIACACGES-INIVDLS-NASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIR 85
S G F+ + ++ I + NA++ +G + + SP S H R R
Sbjct: 427 SPPGDFVLSSSADTTIRLWSTKLNANLVC-YKGHNYPVWDAQFSPFGHYFASCSHDRTAR 485
Query: 86 VWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKG 145
+W + ++ LR GH + HP+ +AT +D+ V +WDV G C F GH+
Sbjct: 486 IWSMDRIQPLRIMAGHLSDVDCVQWHPNCNYIATGSSDKTVRLWDVQTGECVRIFIGHRS 545
Query: 146 VVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLIS 205
+V S+ PD + SG +D T+ +WDL +C+ L H S V S++ + +GS L S
Sbjct: 546 MVLSLAMSPDG--RYMASGDEDGTIMMWDLSTARCITPLMGHNSCVWSLSYSGEGSLLAS 603
Query: 206 AGRDKVVNLWDLRDYSCKLT 225
D V LWD+ S KLT
Sbjct: 604 GSADCTVKLWDVTS-STKLT 622
Score = 241 (89.9 bits), Expect = 4.8e-18, Sum P(2) = 4.8e-18
Identities = 65/220 (29%), Positives = 103/220 (46%)
Query: 389 SY-VLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAV 447
SY +L GHS V + S +++ S D ++RLW ++ + GH V
Sbjct: 410 SYTLLLGHSGPVY---SATFSPPGDFVLSSSADTTIRLWSTKLNANLVCYKGHNYPVWDA 466
Query: 448 AFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDS 507
FS ++ S S D T ++WS D + QP+ ++A H D++ + PN +
Sbjct: 467 QFSP-FGHYFASCSHDRTARIWSMDRI-----QPLR-----IMAGHLSDVDCVQWHPNCN 515
Query: 508 LVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISD 567
+ TGS D+T +W + V F GH+ + S+ SP + + + D TI +W +S
Sbjct: 516 YIATGSSDKTVRLWDVQTGECVRIFIGHRSMVLSLAMSPDGRYMASGDEDGTIMMWDLST 575
Query: 568 GSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTV 607
C+ GH S V S+ G+ + S AD VKLW V
Sbjct: 576 ARCITPLMGHNSCVWSLSYSGEGSLLASGSADCTVKLWDV 615
Score = 230 (86.0 bits), Expect = 7.9e-17, Sum P(2) = 7.9e-17
Identities = 57/210 (27%), Positives = 95/210 (45%)
Query: 457 LVSGS-SDHTIKVWSFDGL-----------SDDAEQ---PMNLKAKAVVAAHGKDINSLA 501
LV+G SD +IKVW + +D ++Q P ++ ++ H + S
Sbjct: 366 LVAGGFSDSSIKVWDMAKIGQAGSGALQAENDSSDQSIGPNGRRSYTLLLGHSGPVYSAT 425
Query: 502 VAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIK 561
+P V + S D T +W ++V ++GH +W +FSP + S D+T +
Sbjct: 426 FSPPGDFVLSSSADTTIRLWSTKLNANLVCYKGHNYPVWDAQFSPFGHYFASCSHDRTAR 485
Query: 562 IWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHED 621
IWS+ L+ GH S V + I + +D V+LW V+TGEC+ + H
Sbjct: 486 IWSMDRIQPLRIMAGHLSDVDCVQWHPNCNYIATGSSDKTVRLWDVQTGECVRIFIGHRS 545
Query: 622 KIWALAVGKKTEMFATGGSDALVNLWHDST 651
+ +LA+ A+G D + +W ST
Sbjct: 546 MVLSLAMSPDGRYMASGDEDGTIMMWDLST 575
Score = 211 (79.3 bits), Expect = 1.5e-13, P = 1.5e-13
Identities = 49/165 (29%), Positives = 73/165 (44%)
Query: 58 GGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPSGGLL 117
G S + + SP + SS IR+W L +KGH+ P P G
Sbjct: 416 GHSGPVYSATFSPPGDFVLSSSADTTIRLWSTKLNANLVCYKGHNYPVWDAQFSPFGHYF 475
Query: 118 ATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLA 177
A+ DR +W +D GH V + +HP+ + + +GS D TVR+WD+
Sbjct: 476 ASCSHDRTARIWSMDRIQPLRIMAGHLSDVDCVQWHPNCN--YIATGSSDKTVRLWDVQT 533
Query: 178 KKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSC 222
+CV H S V S+A++ DG + S D + +WDL C
Sbjct: 534 GECVRIFIGHRSMVLSLAMSPDGRYMASGDEDGTIMMWDLSTARC 578
Score = 171 (65.3 bits), Expect = 2.2e-10, Sum P(2) = 2.2e-10
Identities = 43/180 (23%), Positives = 85/180 (47%)
Query: 418 SKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDD 477
S D + R+W + + + GH+ V V + N++ +GSSD T+++W D
Sbjct: 479 SHDRTARIWSMDRIQPLRIMAGHLSDVDCVQWHPNC-NYIATGSSDKTVRLW-------D 530
Query: 478 AEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKR 537
+ ++ + H + SLA++P+ + +G +D T +W L + GH
Sbjct: 531 VQTGECVR---IFIGHRSMVLSLAMSPDGRYMASGDEDGTIMMWDLSTARCITPLMGHNS 587
Query: 538 GIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFE--GHTSSVLRA--SFLTRGAQI 593
+WS+ +S ++ + S D T+K+W ++ + L E S+ LR+ +F T+ +
Sbjct: 588 CVWSLSYSGEGSLLASGSADCTVKLWDVTSSTKLTKAEEKNGNSNRLRSLRTFPTKSTPV 647
Score = 159 (61.0 bits), Expect = 4.4e-09, Sum P(2) = 4.4e-09
Identities = 56/213 (26%), Positives = 95/213 (44%)
Query: 309 AATVLPSNQGLLCVTADQQLLLYTTVEVPEKKMELILSKRLVGYNEEILDLKFLGEEEQY 368
+AT P +L +AD + L++T + L+ K G+N + D +F Y
Sbjct: 423 SATFSPPGDFVLSSSADTTIRLWST----KLNANLVCYK---GHNYPVWDAQF-SPFGHY 474
Query: 369 LAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDS 428
A ++ +++ + + ++AGH V C+ + I TGS D +VRLWD
Sbjct: 475 FASCSHDRTARIWSMDRIQPLRIMAGHLSDVDCVQWHPNCN---YIATGSSDKTVRLWDV 531
Query: 429 ESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKA 488
++ CV + GH V ++A S ++ SG D TI +W LS +
Sbjct: 532 QTGECVRIFIGHRSMVLSLAMSPD-GRYMASGDEDGTIMMWD---LS-------TARCIT 580
Query: 489 VVAAHGKDINSLAVAPNDSLVCTGSQDRTACVW 521
+ H + SL+ + SL+ +GS D T +W
Sbjct: 581 PLMGHNSCVWSLSYSGEGSLLASGSADCTVKLW 613
Score = 59 (25.8 bits), Expect = 1.7e-20, Sum P(2) = 1.7e-20
Identities = 12/33 (36%), Positives = 20/33 (60%)
Query: 143 HKGVVSSILFHPDTDKSLLFSGSDDATVRVWDL 175
H G+ S + H D SL+ G D++++VWD+
Sbjct: 352 HNGLNCSSISH---DGSLVAGGFSDSSIKVWDM 381
Score = 44 (20.5 bits), Expect = 6.3e-19, Sum P(2) = 6.3e-19
Identities = 10/31 (32%), Positives = 15/31 (48%)
Query: 101 HDGPAIGMACHPSGGLLATAGADRKVLVWDV 131
H+G H G L+A +D + VWD+
Sbjct: 352 HNGLNCSSISH-DGSLVAGGFSDSSIKVWDM 381
Score = 44 (20.5 bits), Expect = 6.3e-19, Sum P(2) = 6.3e-19
Identities = 13/54 (24%), Positives = 25/54 (46%)
Query: 43 NIVDLSNASIKS----TIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTL 92
N V LS+ ++ S T + + ++S D L+ I+VWD++ +
Sbjct: 331 NRVQLSSVAMPSVSFYTFVNTHNGLNCSSISHDGSLVAGGFSDSSIKVWDMAKI 384
Score = 43 (20.2 bits), Expect = 8.1e-19, Sum P(2) = 8.1e-19
Identities = 7/23 (30%), Positives = 13/23 (56%)
Query: 195 AITSDGSTLISAGRDKVVNLWDL 217
+I+ DGS + D + +WD+
Sbjct: 359 SISHDGSLVAGGFSDSSIKVWDM 381
>UNIPROTKB|F1PUU2 [details] [associations]
symbol:NLE1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0007219 "Notch signaling pathway"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0001826
"inner cell mass cell differentiation" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0007219 GeneTree:ENSGT00690000102167
PRINTS:PR00319 GO:GO:0001826 EMBL:AAEX03006625
Ensembl:ENSCAFT00000029052 Uniprot:F1PUU2
Length = 436
Score = 244 (91.0 bits), Expect = 1.2e-17, P = 1.2e-17
Identities = 76/304 (25%), Positives = 141/304 (46%)
Query: 349 LVGYNEEILDLKF----LGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDT 404
L G+++ I L + E +Y+A ++ V+V+D ++ C +L GH++ V CL
Sbjct: 146 LAGHSKWITGLSWEPLHANPECRYMASSSKDGSVRVWDTTAGRCERILTGHTQSVTCLRW 205
Query: 405 CALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDH 464
G L+ + S+D ++++W + GH V +A S L +G+ +
Sbjct: 206 ----GGDGLLYSASQDRTIKVWRAHDGVLCRTLQGHGHWVNTMALSTDYA--LRTGAFEP 259
Query: 465 TIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWR-L 523
+ L ++ LK +A+ + N + + LV +GS D T +W
Sbjct: 260 AEASINAQDLQGSLQE---LKDRAL-----RRYNLVRGQGPERLV-SGSDDFTLFMWSPA 310
Query: 524 PDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLR 583
D + GH+ I V FSP +++ +AS DK+IK+W G L + GH ++V +
Sbjct: 311 EDKKPLARMTGHQALINQVLFSPDSRIIASASFDKSIKLWDGRTGKYLASLRGHVAAVYQ 370
Query: 584 ASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDAL 643
++ +VS +D +K+W V+ + A H D+++A+ + A+GG D
Sbjct: 371 IAWSADSRLLVSGSSDSTLKVWDVKAQKLAADLPGHADEVYAVDWSPDGQRVASGGKDKC 430
Query: 644 VNLW 647
+ +W
Sbjct: 431 LRIW 434
Score = 227 (85.0 bits), Expect = 9.6e-16, P = 9.6e-16
Identities = 87/387 (22%), Positives = 165/387 (42%)
Query: 54 STIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPS 113
S++EG S+ + ++A SP K L S +R WDLST + +GH + ++ P
Sbjct: 59 SSLEGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHFTCQGHRHWVLSISWSPD 118
Query: 114 GGLLATAGADRKVLVWDVDGGFCT-HYFKGHKGVVSSILFHP---DTDKSLLFSGSDDAT 169
G LA+ + ++L+WD G GH ++ + + P + + + S S D +
Sbjct: 119 GKTLASGCKNGQILLWDPSTGKQVGRVLAGHSKWITGLSWEPLHANPECRYMASSSKDGS 178
Query: 170 VRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRD-YSCKLTVPT 228
VRVWD A +C L H VT + DG L SA +D+ + +W D C+
Sbjct: 179 VRVWDTTAGRCERILTGHTQSVTCLRWGGDG-LLYSASQDRTIKVWRAHDGVLCRTLQGH 237
Query: 229 YEMVEAVC-----AIPPGSAFDSFLSSYNQQTIKKKRRSLEIHFITVGERGIVRMWNADS 283
V + A+ G AF+ +S N Q ++ + L+ + +VR +
Sbjct: 238 GHWVNTMALSTDYALRTG-AFEPAEASINAQDLQGSLQELKDRALR--RYNLVRGQGPER 294
Query: 284 ACLYEQKSSDVTI-SFEMDDSKRGFTAATVLPSNQGLLCVTADQQLLLYTTVEVPEKKME 342
S D T+ + + K+ T + + + D +++ + + K +
Sbjct: 295 LV---SGSDDFTLFMWSPAEDKKPLARMTGHQALINQVLFSPDSRIIASASFDKSIKLWD 351
Query: 343 LILSKRLV---GYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIV 399
K L G+ + + + + + L ++ ++V+D+ + + L GH++ V
Sbjct: 352 GRTGKYLASLRGHVAAVYQIAW-SADSRLLVSGSSDSTLKVWDVKAQKLAADLPGHADEV 410
Query: 400 LCLDTCALSSGKILIVTGSKDNSVRLW 426
+D G+ + +G KD +R+W
Sbjct: 411 YAVDWSP--DGQ-RVASGGKDKCLRIW 434
Score = 188 (71.2 bits), Expect = 2.1e-11, P = 2.1e-11
Identities = 96/398 (24%), Positives = 174/398 (43%)
Query: 93 KCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYF-KGHKGVVSSIL 151
+C S +GH I +A P+G LA+ D V WD+ H+ +GH+ V SI
Sbjct: 56 RCTSSLEGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTE-TPHFTCQGHRHWVLSIS 114
Query: 152 FHPDTDKSLLFSGSDDATVRVWDLLAKKCVA-TLDKHFSRVTSMA-----ITSDGSTLIS 205
+ PD K+L SG + + +WD K V L H +T ++ + + S
Sbjct: 115 WSPD-GKTLA-SGCKNGQILLWDPSTGKQVGRVLAGHSKWITGLSWEPLHANPECRYMAS 172
Query: 206 AGRDKVVNLWDLRDYSCKLTVPTYEMVEAVCAIPPGSAFDSFLSSYNQ-QTIKKKR---- 260
+ +D V +WD C+ + + ++V + G D L S +Q +TIK R
Sbjct: 173 SSKDGSVRVWDTTAGRCERILTGH--TQSVTCLRWGG--DGLLYSASQDRTIKVWRAHDG 228
Query: 261 ---RSLEIHFITVGERGIVRMWNADSACLYEQKSSDVT---ISFEMDDSKRGFTAATVLP 314
R+L+ H V + + + +E + + + + + K L
Sbjct: 229 VLCRTLQGHGHWVNTMALSTDYALRTGA-FEPAEASINAQDLQGSLQELKDRALRRYNLV 287
Query: 315 SNQG---LLCVTADQQLLLYTTVEVPEKKMELILSKRLVGYNEEILDLKFLGEEEQYLAV 371
QG L+ + D L +++ E +KK L+ R+ G+ I + F + + +A
Sbjct: 288 RGQGPERLVSGSDDFTLFMWSPAE--DKKP---LA-RMTGHQALINQVLF-SPDSRIIAS 340
Query: 372 ATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESR 431
A+ + ++++D + L GH V + A S+ L+V+GS D+++++WD +++
Sbjct: 341 ASFDKSIKLWDGRTGKYLASLRGH---VAAVYQIAWSADSRLLVSGSSDSTLKVWDVKAQ 397
Query: 432 CCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVW 469
GH V AV +S Q + SG D +++W
Sbjct: 398 KLAADLPGHADEVYAVDWSPDGQR-VASGGKDKCLRIW 434
Score = 183 (69.5 bits), Expect = 1.8e-20, Sum P(2) = 1.8e-20
Identities = 53/179 (29%), Positives = 84/179 (46%)
Query: 28 SSDGSFIACACGES-INIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRV 86
S G ++A G++ + DLS + T +G + +++ SPD K L S + +I +
Sbjct: 74 SPTGKYLASGSGDTTVRFWDLSTETPHFTCQGHRHWVLSISWSPDGKTLASGCKNGQILL 133
Query: 87 WDLSTLKCL-RSWKGHDGPAIGMA-----CHPSGGLLATAGADRKVLVWDVDGGFCTHYF 140
WD ST K + R GH G++ +P +A++ D V VWD G C
Sbjct: 134 WDPSTGKQVGRVLAGHSKWITGLSWEPLHANPECRYMASSSKDGSVRVWDTTAGRCERIL 193
Query: 141 KGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSD 199
GH V+ + + D LL+S S D T++VW TL H V +MA+++D
Sbjct: 194 TGHTQSVTCLRWGGD---GLLYSASQDRTIKVWRAHDGVLCRTLQGHGHWVNTMALSTD 249
Score = 137 (53.3 bits), Expect = 1.8e-20, Sum P(2) = 1.8e-20
Identities = 38/131 (29%), Positives = 63/131 (48%)
Query: 392 LAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSK 451
+ GH ++ + S +I + S D S++LWD + + GH+ AV +A+S
Sbjct: 319 MTGHQALI---NQVLFSPDSRIIASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSA 375
Query: 452 KLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCT 511
LVSGSSD T+KVW D Q K A + H ++ ++ +P+ V +
Sbjct: 376 D-SRLLVSGSSDSTLKVW------DVKAQ----KLAADLPGHADEVYAVDWSPDGQRVAS 424
Query: 512 GSQDRTACVWR 522
G +D+ +WR
Sbjct: 425 GGKDKCLRIWR 435
Score = 137 (53.3 bits), Expect = 8.5e-06, P = 8.5e-06
Identities = 38/165 (23%), Positives = 68/165 (41%)
Query: 493 HGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVI 552
H + + S+A +P + +GS D T W L T +GH+ + S+ +SP + +
Sbjct: 64 HSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHFTCQGHRHWVLSISWSPDGKTLA 123
Query: 553 TASGDKTIKIWSISDGSCL-KTFEGHTSSVLRASFLTRGAQ-----IVSCGADGLVKLWT 606
+ + I +W S G + + GH+ + S+ A + S DG V++W
Sbjct: 124 SGCKNGQILLWDPSTGKQVGRVLAGHSKWITGLSWEPLHANPECRYMASSSKDGSVRVWD 183
Query: 607 VRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLW--HD 649
G C H + L G +++ D + +W HD
Sbjct: 184 TTAGRCERILTGHTQSVTCLRWGGDGLLYSAS-QDRTIKVWRAHD 227
Score = 131 (51.2 bits), Expect = 3.9e-05, P = 3.9e-05
Identities = 36/127 (28%), Positives = 58/127 (45%)
Query: 531 TFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRG 590
+ GH + SV FSP + + + SGD T++ W +S + T +GH VL S+ G
Sbjct: 60 SLEGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHFTCQGHRHWVLSISWSPDG 119
Query: 591 AQIVSCGADGLVKLWTVRTGE----CIATYDKHEDKI-WA-LAVGKKTEMFATGGSDALV 644
+ S +G + LW TG+ +A + K + W L + A+ D V
Sbjct: 120 KTLASGCKNGQILLWDPSTGKQVGRVLAGHSKWITGLSWEPLHANPECRYMASSSKDGSV 179
Query: 645 NLWHDST 651
+W D+T
Sbjct: 180 RVW-DTT 185
>UNIPROTKB|B4DQJ1 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9606 "Homo sapiens" [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 HOGENOM:HOG000091644 OMA:HAGSVNE
EMBL:AL451070 EMBL:AC114495 HOVERGEN:HBG105197 UniGene:Hs.33962
HGNC:HGNC:30857 ChiTaRS:SNRNP40 EMBL:AK298823 IPI:IPI00006723
SMR:B4DQJ1 STRING:B4DQJ1 Ensembl:ENST00000446633 UCSC:uc010oge.2
Uniprot:B4DQJ1
Length = 409
Score = 230 (86.0 bits), Expect = 1.9e-20, Sum P(2) = 1.9e-20
Identities = 60/161 (37%), Positives = 78/161 (48%)
Query: 100 GHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHY--FKGHKGVVSSILFHPDTD 157
GH+G HP+G LA+AG DR +L+W+V G C +Y KGH G V + H +TD
Sbjct: 64 GHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGD-CDNYATLKGHSGAVMEL--HYNTD 120
Query: 158 KSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDK-VVNLWD 216
S+LFS S D TV VWD + V L H S V S G L+ G D V LWD
Sbjct: 121 GSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWD 180
Query: 217 LRDYSCKLTVPTYEMVEAVCAIPPGSAFDSFLSSYNQQTIK 257
+R K + T++ V A+ D +S IK
Sbjct: 181 IRK---KAAIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIK 218
Score = 219 (82.2 bits), Expect = 6.1e-15, P = 6.1e-15
Identities = 71/271 (26%), Positives = 113/271 (41%)
Query: 391 VLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCC-VGVGTGHMGAVGAVAF 449
+L+GH V C C + + D + LW+ C GH GAV + +
Sbjct: 61 LLSGHEGEVYC---CKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHY 117
Query: 450 SKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPND-SL 508
+ + L S S+D T+ VW S+ E+ LK H +NS A L
Sbjct: 118 NTD-GSMLFSASTDKTVAVWD----SETGERVKRLKG------HTSFVNSCYPARRGPQL 166
Query: 509 VCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDG 568
VCTGS D T +W + ++ TF+ + + +V F+ +I+ D IK+W +
Sbjct: 167 VCTGSDDGTVKLWDIRKKAAIQTFQNTYQ-VLAVTFNDTSDQIISGGIDNDIKVWDLRQN 225
Query: 569 SCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRT----GECIATY--DKH--E 620
T GH SV S + G+ ++S D V++W VR C+ + + H E
Sbjct: 226 KLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFE 285
Query: 621 DKIWALAVGKKTEMFATGGSDALVNLWHDST 651
+ + A G +D V +W D+T
Sbjct: 286 KNLLRCSWSPDGSKIAAGSADRFVYVW-DTT 315
Score = 215 (80.7 bits), Expect = 1.7e-14, P = 1.7e-14
Identities = 51/173 (29%), Positives = 91/173 (52%)
Query: 54 STIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPS 113
+T++G S + L + D +LFS+ + + VWD T + ++ KGH + +C+P+
Sbjct: 103 ATLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHT--SFVNSCYPA 160
Query: 114 G-G--LLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATV 170
G L+ T D V +WD+ F+ V++ + F+ +D+ + SG D +
Sbjct: 161 RRGPQLVCTGSDDGTVKLWDIRKKAAIQTFQNTYQVLA-VTFNDTSDQ--IISGGIDNDI 217
Query: 171 RVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCK 223
+VWDL K T+ H VT ++++S+GS L+S D V +WD+R ++ K
Sbjct: 218 KVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPK 270
Score = 183 (69.5 bits), Expect = 6.4e-11, P = 6.4e-11
Identities = 72/301 (23%), Positives = 127/301 (42%)
Query: 349 LVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYV-LAGHSEIVLCLDTCAL 407
L G+ E+ KF LA A + ++++ +Y L GHS V+ L
Sbjct: 62 LSGHEGEVYCCKF-HPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYN-- 118
Query: 408 SSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIK 467
+ G +L + S D +V +WDSE+ V GH V + +++ + +GS D T+K
Sbjct: 119 TDGSMLF-SASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVK 177
Query: 468 VWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSL--VCTGSQDRTACVWRLPD 525
+W +++ KA + LAV ND+ + +G D VW L
Sbjct: 178 LW-------------DIRKKAAIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQ 224
Query: 526 LVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGS----CLKTFEGHT--- 578
T RGH + + S +++ + D T+++W + + C+K F+G+
Sbjct: 225 NKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNF 284
Query: 579 -SSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFAT 637
++LR S+ G++I + AD V +W + + H I +A + T
Sbjct: 285 EKNLLRCSWSPDGSKIAAGSADRFVYVWDTTSRRILYKLPGHAGSINEVAFHPDEPIIET 344
Query: 638 G 638
G
Sbjct: 345 G 345
Score = 167 (63.8 bits), Expect = 3.8e-09, P = 3.8e-09
Identities = 40/136 (29%), Positives = 65/136 (47%)
Query: 28 SSDGSFIACACGESINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRVW 87
+SD I+ I + DL + T+ G +D++T L+LS + L S+ +RVW
Sbjct: 204 TSD-QIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVW 262
Query: 88 DLSTL----KCLRSWKG--HDGPAIGMACH--PSGGLLATAGADRKVLVWDVDGGFCTHY 139
D+ +C++ ++G H+ + C P G +A ADR V VWD +
Sbjct: 263 DVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDTTSRRILYK 322
Query: 140 FKGHKGVVSSILFHPD 155
GH G ++ + FHPD
Sbjct: 323 LPGHAGSINEVAFHPD 338
Score = 148 (57.2 bits), Expect = 4.7e-07, P = 4.7e-07
Identities = 50/191 (26%), Positives = 82/191 (42%)
Query: 31 GSFIACACGESINIVDLSNASIKSTIEGGSDTITALALSPDDKL--LFSSGHSREIRVWD 88
G + C G V L + K+ I+ +T LA++ +D + S G +I+VWD
Sbjct: 163 GPQLVCT-GSDDGTVKLWDIRKKAAIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWD 221
Query: 89 LSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDV----DGGFCTHYFKGH- 143
L K + +GH G++ G L + D V VWDV C F+G+
Sbjct: 222 LRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNV 281
Query: 144 KGVVSSIL---FHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDG 200
++L + PD K + +GS D V VWD +++ + L H + +A D
Sbjct: 282 HNFEKNLLRCSWSPDGSK--IAAGSADRFVYVWDTTSRRILYKLPGHAGSINEVAFHPD- 338
Query: 201 STLISAGRDKV 211
+I G ++
Sbjct: 339 EPIIETGFHRI 349
Score = 141 (54.7 bits), Expect = 2.7e-06, P = 2.7e-06
Identities = 30/122 (24%), Positives = 57/122 (46%)
Query: 529 VVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSC--LKTFEGHTSSVLRASF 586
++ GH+ ++ +F P + +A D+ I +W++ G C T +GH+ +V+ +
Sbjct: 59 IMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVY-GDCDNYATLKGHSGAVMELHY 117
Query: 587 LTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKK-TEMFATGGSDALVN 645
T G+ + S D V +W TGE + H + + ++ ++ TG D V
Sbjct: 118 NTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVK 177
Query: 646 LW 647
LW
Sbjct: 178 LW 179
Score = 128 (50.1 bits), Expect = 7.4e-05, P = 7.4e-05
Identities = 39/199 (19%), Positives = 91/199 (45%)
Query: 28 SSDGSFI-ACACGESINIVDLSNASIKSTIEGGSDTITAL-ALSPDDKLLFSSGHSREIR 85
++DGS + + + +++ + D ++G + + + +L+ + ++
Sbjct: 118 NTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVK 177
Query: 86 VWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKG 145
+WD+ +++++ + + + + + + + G D + VWD+ T+ +GH
Sbjct: 178 LWDIRKKAAIQTFQ-NTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHAD 236
Query: 146 VVSSILFHPDTDKSLLFSGSDDATVRVWDL--LAKK--CVATLD---KHFSR-VTSMAIT 197
V+ + ++ S L S + D TVRVWD+ A K CV +F + + + +
Sbjct: 237 SVTGLSL--SSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWS 294
Query: 198 SDGSTLISAGRDKVVNLWD 216
DGS + + D+ V +WD
Sbjct: 295 PDGSKIAAGSADRFVYVWD 313
Score = 83 (34.3 bits), Expect = 1.9e-20, Sum P(2) = 1.9e-20
Identities = 30/110 (27%), Positives = 47/110 (42%)
Query: 345 LSKRLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMS----CSYVLAGH-SEIV 399
L+ + G+ + + L L E YL V+V+D+ + C + G+
Sbjct: 227 LTYTMRGHADSVTGLS-LSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFE 285
Query: 400 LCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAF 449
L C+ S I GS D V +WD+ SR + GH G++ VAF
Sbjct: 286 KNLLRCSWSPDGSKIAAGSADRFVYVWDTTSRRILYKLPGHAGSINEVAF 335
>UNIPROTKB|Q5ZJH5 [details] [associations]
symbol:WDR61 "WD repeat-containing protein 61" species:9031
"Gallus gallus" [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=ISS]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=ISS] [GO:0016593 "Cdc73/Paf1
complex" evidence=ISS] [GO:0045638 "negative regulation of myeloid
cell differentiation" evidence=ISS] [GO:0051571 "positive
regulation of histone H3-K4 methylation" evidence=ISS] [GO:2001162
"positive regulation of histone H3-K79 methylation" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0005737 "cytoplasm"
evidence=ISS] [GO:0035327 "transcriptionally active chromatin"
evidence=ISS] [GO:0055087 "Ski complex" evidence=ISS] [GO:0080182
"histone H3-K4 trimethylation" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327
GO:GO:0051571 GO:GO:0032968 GO:GO:0080182 GO:GO:0016593
GO:GO:0045638 GO:GO:2001162 GO:GO:0055087 CTD:80349
HOGENOM:HOG000036765 HOVERGEN:HBG059813 KO:K12602 OrthoDB:EOG4VMFFW
EMBL:AJ720459 IPI:IPI00584957 RefSeq:NP_001005805.1
UniGene:Gga.4665 ProteinModelPortal:Q5ZJH5 GeneID:415359
KEGG:gga:415359 InParanoid:Q5ZJH5 NextBio:20818980 Uniprot:Q5ZJH5
Length = 305
Score = 251 (93.4 bits), Expect = 2.0e-20, P = 2.0e-20
Identities = 77/286 (26%), Positives = 133/286 (46%)
Query: 363 GEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNS 422
G E ++ +V ++ + + L GH V+ +D S + + S D
Sbjct: 31 GSETVISGSLDDLVKVWKWNDEKLDLQWTLEGHQLGVVSVDISHTGS---IAASSSLDAH 87
Query: 423 VRLWDSES-RCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQP 481
+RLWD E+ + + G + A ++AFS Q FL +GS H KV F G+ + ++
Sbjct: 88 IRLWDLETGKQIKSIDAGPVDA-WSLAFSPDSQ-FLATGS--HVGKVNIF-GV-ETGKKE 141
Query: 482 MNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWS 541
+L + GK I S+A +P+ + +G+ D ++ + + T GH I S
Sbjct: 142 YSLDTR------GKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRS 195
Query: 542 VEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGL 601
+ FSP Q+++TAS D IKI+ + + T GH S VL +F VS +D
Sbjct: 196 LTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHGSWVLNVAFCPDDTHFVSSSSDKS 255
Query: 602 VKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLW 647
VK+W T C+ T+ H+D++W + + G D ++++
Sbjct: 256 VKVWDAGTRTCVHTFFDHQDQVWGVKYNGSGSKIVSVGDDQEIHIY 301
Score = 221 (82.9 bits), Expect = 1.7e-16, P = 1.7e-16
Identities = 56/193 (29%), Positives = 90/193 (46%)
Query: 25 LVVSSDGSFIACACGES-INIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSRE 83
L S D F+A +NI + + +++ I ++A SPD K L S
Sbjct: 112 LAFSPDSQFLATGSHVGKVNIFGVETGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGI 171
Query: 84 IRVWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGH 143
I ++D++T K L + +GH P + P LL TA D + ++DV GH
Sbjct: 172 INIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGH 231
Query: 144 KGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTL 203
V ++ F PD D + S S D +V+VWD + CV T H +V + GS +
Sbjct: 232 GSWVLNVAFCPD-DTHFV-SSSSDKSVKVWDAGTRTCVHTFFDHQDQVWGVKYNGSGSKI 289
Query: 204 ISAGRDKVVNLWD 216
+S G D+ ++++D
Sbjct: 290 VSVGDDQEIHIYD 302
Score = 212 (79.7 bits), Expect = 5.2e-15, P = 5.2e-15
Identities = 54/197 (27%), Positives = 93/197 (47%)
Query: 27 VSSDGSFIACACGES-INIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIR 85
+S GS A + ++ I + DL +I+ G +LA SPD + L + H ++
Sbjct: 72 ISHTGSIAASSSLDAHIRLWDLETGKQIKSIDAGPVDAWSLAFSPDSQFLATGSHVGKVN 131
Query: 86 VWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKG 145
++ + T K S + +A P G LA+ D + ++D+ G H +GH
Sbjct: 132 IFGVETGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAM 191
Query: 146 VVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLIS 205
+ S+ F PD+ LL + SDD ++++D+ TL H S V ++A D + +S
Sbjct: 192 PIRSLTFSPDSQ--LLVTASDDGYIKIYDVQHANLAGTLSGHGSWVLNVAFCPDDTHFVS 249
Query: 206 AGRDKVVNLWDLRDYSC 222
+ DK V +WD +C
Sbjct: 250 SSSDKSVKVWDAGTRTC 266
Score = 164 (62.8 bits), Expect = 3.6e-09, P = 3.6e-09
Identities = 58/245 (23%), Positives = 101/245 (41%)
Query: 409 SGKILIVTGSKDNSVRLW--DSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTI 466
+G +++GS D+ V++W + E GH V +V S + S S D I
Sbjct: 30 NGSETVISGSLDDLVKVWKWNDEKLDLQWTLEGHQLGVVSVDISHT-GSIAASSSLDAHI 88
Query: 467 KVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDL 526
++W D E +K+ + A D SLA +P+ + TGS ++ +
Sbjct: 89 RLW-------DLETGKQIKS---IDAGPVDAWSLAFSPDSQFLATGSHVGKVNIFGVETG 138
Query: 527 VSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASF 586
+ + I S+ +SP + + + + D I I+ I+ G L T EGH + +F
Sbjct: 139 KKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTF 198
Query: 587 LTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNL 646
+V+ DG +K++ V+ T H + +A F + SD V +
Sbjct: 199 SPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHGSWVLNVAFCPDDTHFVSSSSDKSVKV 258
Query: 647 WHDST 651
W T
Sbjct: 259 WDAGT 263
Score = 163 (62.4 bits), Expect = 4.7e-09, P = 4.7e-09
Identities = 50/203 (24%), Positives = 91/203 (44%)
Query: 55 TIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPSG 114
T+EG + ++ +S + SS IR+WDL T K ++S A +A P
Sbjct: 59 TLEGHQLGVVSVDISHTGSIAASSSLDAHIRLWDLETGKQIKSIDAGPVDAWSLAFSPDS 118
Query: 115 GLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWD 174
LAT KV ++ V+ G + + SI + PD L SG+ D + ++D
Sbjct: 119 QFLATGSHVGKVNIFGVETGKKEYSLDTRGKFILSIAYSPDG--KYLASGAIDGIINIFD 176
Query: 175 LLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYEMVEA 234
+ K + TL+ H + S+ + D L++A D + ++D++ + T+ +
Sbjct: 177 IATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHGSWVL 236
Query: 235 VCAIPPGSAFDSFLSSYNQQTIK 257
A P F+SS + +++K
Sbjct: 237 NVAFCPDDTH--FVSSSSDKSVK 257
Score = 155 (59.6 bits), Expect = 3.8e-08, P = 3.8e-08
Identities = 64/266 (24%), Positives = 113/266 (42%)
Query: 352 YNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEI---VLCLD----- 403
+N+E LDL++ E Q V+ +I SS +++ E + +D
Sbjct: 49 WNDEKLDLQWTLEGHQLGVVSVDISHTGSIAASSSLDAHIRLWDLETGKQIKSIDAGPVD 108
Query: 404 --TCALSSGKILIVTGSKDNSVRLWDSES-RCCVGVGT-GHMGAVGAVAFSKKLQNFLVS 459
+ A S + TGS V ++ E+ + + T G + ++A+S +L S
Sbjct: 109 AWSLAFSPDSQFLATGSHVGKVNIFGVETGKKEYSLDTRGKF--ILSIAYSPD-GKYLAS 165
Query: 460 GSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTAC 519
G+ D I + FD + K + H I SL +P+ L+ T S D
Sbjct: 166 GAIDGIINI--FDIATG--------KLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIK 215
Query: 520 VWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTS 579
++ + T GH + +V F P D +++S DK++K+W +C+ TF H
Sbjct: 216 IYDVQHANLAGTLSGHGSWVLNVAFCPDDTHFVSSSSDKSVKVWDAGTRTCVHTFFDHQD 275
Query: 580 SVLRASFLTRGAQIVSCGADGLVKLW 605
V + G++IVS G D + ++
Sbjct: 276 QVWGVKYNGSGSKIVSVGDDQEIHIY 301
Score = 134 (52.2 bits), Expect = 8.8e-06, P = 8.8e-06
Identities = 35/121 (28%), Positives = 55/121 (45%)
Query: 533 RGHKRGIWSVEFSPV----DQVVITASGDKTIKIWSISDGSC-LK-TFEGHTSSVLRASF 586
+ H IWSV + + VI+ S D +K+W +D L+ T EGH V+
Sbjct: 13 QAHDDAIWSVAWGKNKKNGSETVISGSLDDLVKVWKWNDEKLDLQWTLEGHQLGVVSVDI 72
Query: 587 LTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNL 646
G+ S D ++LW + TG+ I + D W+LA ++ ATG VN+
Sbjct: 73 SHTGSIAASSSLDAHIRLWDLETGKQIKSIDAGPVDAWSLAFSPDSQFLATGSHVGKVNI 132
Query: 647 W 647
+
Sbjct: 133 F 133
Score = 116 (45.9 bits), Expect = 4.5e-11, Sum P(2) = 4.5e-11
Identities = 32/136 (23%), Positives = 61/136 (44%)
Query: 84 IRVWDLSTLKCLRSW--KGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFK 141
++VW + K W +GH + + +G + A++ D + +WD++ G
Sbjct: 44 VKVWKWNDEKLDLQWTLEGHQLGVVSVDISHTGSIAASSSLDAHIRLWDLETGKQIKSID 103
Query: 142 GHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGS 201
S+ F PD+ L +GS V ++ + K +LD + S+A + DG
Sbjct: 104 AGPVDAWSLAFSPDSQ--FLATGSHVGKVNIFGVETGKKEYSLDTRGKFILSIAYSPDGK 161
Query: 202 TLISAGRDKVVNLWDL 217
L S D ++N++D+
Sbjct: 162 YLASGAIDGIINIFDI 177
Score = 113 (44.8 bits), Expect = 4.5e-11, Sum P(2) = 4.5e-11
Identities = 33/121 (27%), Positives = 56/121 (46%)
Query: 349 LVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALS 408
L G+ I L F + Q L A++ +++YD+ + + L+GH VL + C
Sbjct: 186 LEGHAMPIRSLTF-SPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHGSWVLNVAFCPDD 244
Query: 409 SGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKV 468
+ V+ S D SV++WD+ +R CV H V V ++ +VS D I +
Sbjct: 245 TH---FVSSSSDKSVKVWDAGTRTCVHTFFDHQDQVWGVKYNGSGSK-IVSVGDDQEIHI 300
Query: 469 W 469
+
Sbjct: 301 Y 301
>UNIPROTKB|F1NFT8 [details] [associations]
symbol:WDR61 "WD repeat-containing protein 61" species:9031
"Gallus gallus" [GO:0016593 "Cdc73/Paf1 complex" evidence=IEA]
[GO:0032968 "positive regulation of transcription elongation from
RNA polymerase II promoter" evidence=IEA] [GO:0035327
"transcriptionally active chromatin" evidence=IEA] [GO:0045638
"negative regulation of myeloid cell differentiation" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0051571 "positive
regulation of histone H3-K4 methylation" evidence=IEA] [GO:0055087
"Ski complex" evidence=IEA] [GO:0080182 "histone H3-K4
trimethylation" evidence=IEA] [GO:2001162 "positive regulation of
histone H3-K79 methylation" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327 GO:GO:0051571
GO:GO:0032968 GO:GO:0080182 GO:GO:0016593 GO:GO:0045638
GO:GO:2001162 GeneTree:ENSGT00700000104507 GO:GO:0055087
OMA:IATGSHH IPI:IPI00584957 EMBL:AADN02040454
ProteinModelPortal:F1NFT8 PRIDE:F1NFT8 Ensembl:ENSGALT00000034634
Uniprot:F1NFT8
Length = 305
Score = 251 (93.4 bits), Expect = 2.0e-20, P = 2.0e-20
Identities = 77/286 (26%), Positives = 133/286 (46%)
Query: 363 GEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNS 422
G E ++ +V ++ + + L GH V+ +D S + + S D
Sbjct: 31 GSETVISGSLDDLVKVWKWNDEKLDLQWTLEGHQLGVVSVDISHTGS---IAASSSLDAH 87
Query: 423 VRLWDSES-RCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQP 481
+RLWD E+ + + G + A ++AFS Q FL +GS H KV F G+ + ++
Sbjct: 88 IRLWDLETGKQIKSIDAGPVDA-WSLAFSPDSQ-FLATGS--HVGKVNIF-GV-ETGKKE 141
Query: 482 MNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWS 541
+L + GK I S+A +P+ + +G+ D ++ + + T GH I S
Sbjct: 142 YSLDTR------GKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRS 195
Query: 542 VEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGL 601
+ FSP Q+++TAS D IKI+ + + T GH S VL +F VS +D
Sbjct: 196 LTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHGSWVLNVAFCPDDTHFVSSSSDKS 255
Query: 602 VKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLW 647
VK+W T C+ T+ H+D++W + + G D ++++
Sbjct: 256 VKVWDAGTRTCVHTFFDHQDQVWGVKYNGSGSKIVSVGDDQEIHIY 301
Score = 221 (82.9 bits), Expect = 1.7e-16, P = 1.7e-16
Identities = 56/193 (29%), Positives = 90/193 (46%)
Query: 25 LVVSSDGSFIACACGES-INIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSRE 83
L S D F+A +NI + + +++ I ++A SPD K L S
Sbjct: 112 LAFSPDSQFLATGSHVGKVNIFGVETGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGI 171
Query: 84 IRVWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGH 143
I ++D++T K L + +GH P + P LL TA D + ++DV GH
Sbjct: 172 INIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGH 231
Query: 144 KGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTL 203
V ++ F PD D + S S D +V+VWD + CV T H +V + GS +
Sbjct: 232 GSWVLNVAFCPD-DTHFV-SSSSDKSVKVWDAGTRTCVHTFFDHQDQVWGVKYNGSGSKI 289
Query: 204 ISAGRDKVVNLWD 216
+S G D+ ++++D
Sbjct: 290 VSVGDDQEIHIYD 302
Score = 212 (79.7 bits), Expect = 5.2e-15, P = 5.2e-15
Identities = 54/197 (27%), Positives = 93/197 (47%)
Query: 27 VSSDGSFIACACGES-INIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIR 85
+S GS A + ++ I + DL +I+ G +LA SPD + L + H ++
Sbjct: 72 ISHTGSIAASSSLDAHIRLWDLETGKQIKSIDAGPVDAWSLAFSPDSQFLATGSHVGKVN 131
Query: 86 VWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKG 145
++ + T K S + +A P G LA+ D + ++D+ G H +GH
Sbjct: 132 IFGVETGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAM 191
Query: 146 VVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLIS 205
+ S+ F PD+ LL + SDD ++++D+ TL H S V ++A D + +S
Sbjct: 192 PIRSLTFSPDSQ--LLVTASDDGYIKIYDVQHANLAGTLSGHGSWVLNVAFCPDDTHFVS 249
Query: 206 AGRDKVVNLWDLRDYSC 222
+ DK V +WD +C
Sbjct: 250 SSSDKSVKVWDAGTRTC 266
Score = 163 (62.4 bits), Expect = 4.7e-09, P = 4.7e-09
Identities = 50/203 (24%), Positives = 91/203 (44%)
Query: 55 TIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPSG 114
T+EG + ++ +S + SS IR+WDL T K ++S A +A P
Sbjct: 59 TLEGHQLGVVSVDISHTGSIAASSSLDAHIRLWDLETGKQIKSIDAGPVDAWSLAFSPDS 118
Query: 115 GLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWD 174
LAT KV ++ V+ G + + SI + PD L SG+ D + ++D
Sbjct: 119 QFLATGSHVGKVNIFGVETGKKEYSLDTRGKFILSIAYSPDG--KYLASGAIDGIINIFD 176
Query: 175 LLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYEMVEA 234
+ K + TL+ H + S+ + D L++A D + ++D++ + T+ +
Sbjct: 177 IATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHGSWVL 236
Query: 235 VCAIPPGSAFDSFLSSYNQQTIK 257
A P F+SS + +++K
Sbjct: 237 NVAFCPDDTH--FVSSSSDKSVK 257
Score = 163 (62.4 bits), Expect = 4.7e-09, P = 4.7e-09
Identities = 58/244 (23%), Positives = 100/244 (40%)
Query: 410 GKILIVTGSKDNSVRLW--DSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIK 467
G +++GS D+ V++W + E GH V +V S + S S D I+
Sbjct: 31 GSETVISGSLDDLVKVWKWNDEKLDLQWTLEGHQLGVVSVDISHT-GSIAASSSLDAHIR 89
Query: 468 VWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLV 527
+W D E +K+ + A D SLA +P+ + TGS ++ +
Sbjct: 90 LW-------DLETGKQIKS---IDAGPVDAWSLAFSPDSQFLATGSHVGKVNIFGVETGK 139
Query: 528 SVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFL 587
+ + I S+ +SP + + + + D I I+ I+ G L T EGH + +F
Sbjct: 140 KEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFS 199
Query: 588 TRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLW 647
+V+ DG +K++ V+ T H + +A F + SD V +W
Sbjct: 200 PDSQLLVTASDDGYIKIYDVQHANLAGTLSGHGSWVLNVAFCPDDTHFVSSSSDKSVKVW 259
Query: 648 HDST 651
T
Sbjct: 260 DAGT 263
Score = 135 (52.6 bits), Expect = 6.8e-06, P = 6.8e-06
Identities = 36/121 (29%), Positives = 57/121 (47%)
Query: 533 RGHKRGIWSVEF--SPVD--QVVITASGDKTIKIWSISDGSC-LK-TFEGHTSSVLRASF 586
+ H IWSV + + D + VI+ S D +K+W +D L+ T EGH V+
Sbjct: 13 QAHDDAIWSVAWGKNKKDGSETVISGSLDDLVKVWKWNDEKLDLQWTLEGHQLGVVSVDI 72
Query: 587 LTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNL 646
G+ S D ++LW + TG+ I + D W+LA ++ ATG VN+
Sbjct: 73 SHTGSIAASSSLDAHIRLWDLETGKQIKSIDAGPVDAWSLAFSPDSQFLATGSHVGKVNI 132
Query: 647 W 647
+
Sbjct: 133 F 133
Score = 116 (45.9 bits), Expect = 0.00089, P = 0.00089
Identities = 32/136 (23%), Positives = 61/136 (44%)
Query: 84 IRVWDLSTLKCLRSW--KGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFK 141
++VW + K W +GH + + +G + A++ D + +WD++ G
Sbjct: 44 VKVWKWNDEKLDLQWTLEGHQLGVVSVDISHTGSIAASSSLDAHIRLWDLETGKQIKSID 103
Query: 142 GHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGS 201
S+ F PD+ L +GS V ++ + K +LD + S+A + DG
Sbjct: 104 AGPVDAWSLAFSPDSQ--FLATGSHVGKVNIFGVETGKKEYSLDTRGKFILSIAYSPDGK 161
Query: 202 TLISAGRDKVVNLWDL 217
L S D ++N++D+
Sbjct: 162 YLASGAIDGIINIFDI 177
Score = 116 (45.9 bits), Expect = 0.00089, P = 0.00089
Identities = 61/285 (21%), Positives = 120/285 (42%)
Query: 199 DGS-TLISAGRDKVVNLWDLRDYSCKL--TVPTYEM------VEAVCAIPPGSAFDSFLS 249
DGS T+IS D +V +W D L T+ +++ + +I S+ D+ +
Sbjct: 30 DGSETVISGSLDDLVKVWKWNDEKLDLQWTLEGHQLGVVSVDISHTGSIAASSSLDAHIR 89
Query: 250 SYNQQTIKKKRRSLEIHFITVGERGIVRMWNADSACLYEQKSSDVTISFEMDDSKRGFTA 309
++ +T K+ +S++ + ++ DS L F ++ K+ ++
Sbjct: 90 LWDLET-GKQIKSIDAGPVDAWSLA----FSPDSQFLATGSHVGKVNIFGVETGKKEYSL 144
Query: 310 ATVLPSNQGLLCV--TADQQLLLYTTVEVPEKKMELILSK---RLVGYNEEILDLKFLGE 364
T + +L + + D + L ++ ++ K L G+ I L F
Sbjct: 145 DT---RGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTF-SP 200
Query: 365 EEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVR 424
+ Q L A++ +++YD+ + + L+GH VL + C + V+ S D SV+
Sbjct: 201 DSQLLVTASDDGYIKIYDVQHANLAGTLSGHGSWVLNVAFCPDDTH---FVSSSSDKSVK 257
Query: 425 LWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVW 469
+WD+ +R CV H V V ++ +VS D I ++
Sbjct: 258 VWDAGTRTCVHTFFDHQDQVWGVKYNGSGSK-IVSVGDDQEIHIY 301
>UNIPROTKB|I3LTI2 [details] [associations]
symbol:NLE1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0007219 "Notch signaling pathway" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0001826 "inner cell mass
cell differentiation" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 GO:GO:0005730
Gene3D:2.130.10.10 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GeneTree:ENSGT00690000102167 InterPro:IPR011047 SUPFAM:SSF50998
PRINTS:PR00319 GO:GO:0001826 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 CTD:54475 EMBL:FP565655
RefSeq:XP_003358201.1 Ensembl:ENSSSCT00000026878 GeneID:100626208
KEGG:ssc:100626208 Uniprot:I3LTI2
Length = 485
Score = 241 (89.9 bits), Expect = 3.7e-17, P = 3.7e-17
Identities = 76/308 (24%), Positives = 142/308 (46%)
Query: 345 LSKRLVGYNEEILDLKF----LGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVL 400
+ + L G+++ I L + E +Y+A ++ V+V+D ++ C +L GH++ V
Sbjct: 191 VGRALAGHSKWITALSWEPLHANPECRYVASSSKDGSVRVWDTTAGRCERILTGHTQSVT 250
Query: 401 CLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSG 460
CL G L+ + S+D ++++W + GH V +A S L +G
Sbjct: 251 CLRW----GGDGLLYSASQDRTIKVWRAHDGVLCRTLQGHGHWVNTMALSTDYA--LRTG 304
Query: 461 SSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACV 520
+ + + L ++ LK +A+ N + + LV +GS D T +
Sbjct: 305 AFEPAEASVNAQDLRGSLQE---LKERAL-----SRYNLVRGRGLERLV-SGSDDFTLFL 355
Query: 521 WR-LPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTS 579
W D + GH+ I V FSP +++ +AS DK+IK+W G L + GH +
Sbjct: 356 WSPAEDKKPLARMTGHQALINQVLFSPDSRIIASASFDKSIKLWDGRTGKYLASLRGHVA 415
Query: 580 SVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGG 639
+V + ++ +VS +D +K+W V+ + A H D+++A+ + A+GG
Sbjct: 416 AVYQIAWSADSRLLVSGSSDSTLKVWDVKAQKLAADLPGHADEVYAVDWSPDGQRVASGG 475
Query: 640 SDALVNLW 647
D + +W
Sbjct: 476 KDKCLRIW 483
Score = 235 (87.8 bits), Expect = 1.7e-16, P = 1.7e-16
Identities = 91/390 (23%), Positives = 172/390 (44%)
Query: 54 STIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPS 113
S++EG S+ + ++A SP K L S +R WDLST + +GH + ++ P
Sbjct: 108 SSLEGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHFTCQGHRHWVLSISWSPD 167
Query: 114 GGLLATAGADRKVLVWDVDGGFCT-HYFKGHKGVVSSILFHP---DTDKSLLFSGSDDAT 169
G LA+ + ++L+WD G GH ++++ + P + + + S S D +
Sbjct: 168 GKKLASGCKNGQILLWDPSTGKQVGRALAGHSKWITALSWEPLHANPECRYVASSSKDGS 227
Query: 170 VRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRD-YSCKLTVPT 228
VRVWD A +C L H VT + DG L SA +D+ + +W D C+
Sbjct: 228 VRVWDTTAGRCERILTGHTQSVTCLRWGGDG-LLYSASQDRTIKVWRAHDGVLCRTLQGH 286
Query: 229 YEMVEAVC-----AIPPGSAFDSFLSSYNQQTIKK-----KRRSLEIHFITVGERGIVRM 278
V + A+ G AF+ +S N Q ++ K R+L + + G RG+ R+
Sbjct: 287 GHWVNTMALSTDYALRTG-AFEPAEASVNAQDLRGSLQELKERALSRYNLVRG-RGLERL 344
Query: 279 WN-ADSACLYE-QKSSDVTISFEMDDSKRGFTAATVLPSNQGLLCVTADQQLLLYTTVEV 336
+ +D L+ + D M + P ++ + + D+ + L+
Sbjct: 345 VSGSDDFTLFLWSPAEDKKPLARMTGHQALINQVLFSPDSRIIASASFDKSIKLWDG--- 401
Query: 337 PEKKMELILSKRLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHS 396
+ + + S R G+ + + + + + L ++ ++V+D+ + + L GH+
Sbjct: 402 --RTGKYLASLR--GHVAAVYQIAW-SADSRLLVSGSSDSTLKVWDVKAQKLAADLPGHA 456
Query: 397 EIVLCLDTCALSSGKILIVTGSKDNSVRLW 426
+ V +D G+ + +G KD +R+W
Sbjct: 457 DEVYAVDWSP--DGQ-RVASGGKDKCLRIW 483
Score = 196 (74.1 bits), Expect = 3.5e-12, P = 3.5e-12
Identities = 95/396 (23%), Positives = 171/396 (43%)
Query: 93 KCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYF-KGHKGVVSSIL 151
+C S +GH I +A P+G LA+ D V WD+ H+ +GH+ V SI
Sbjct: 105 RCTSSLEGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTE-TPHFTCQGHRHWVLSIS 163
Query: 152 FHPDTDKSLLFSGSDDATVRVWDLLAKKCVA-TLDKHFSRVTSMA-----ITSDGSTLIS 205
+ PD K L SG + + +WD K V L H +T+++ + + S
Sbjct: 164 WSPDGKK--LASGCKNGQILLWDPSTGKQVGRALAGHSKWITALSWEPLHANPECRYVAS 221
Query: 206 AGRDKVVNLWDLRDYSCKLTVPTYEMVEAVCAIPPGSAFDSFLSSYNQ-QTIKKKR---- 260
+ +D V +WD C+ + + ++V + G D L S +Q +TIK R
Sbjct: 222 SSKDGSVRVWDTTAGRCERILTGH--TQSVTCLRWGG--DGLLYSASQDRTIKVWRAHDG 277
Query: 261 ---RSLEIHFITVGERGIVRMWNADSACLYEQKSSDVT---ISFEMDDSKRGFTAATVLP 314
R+L+ H V + + + +E + V + + + K + L
Sbjct: 278 VLCRTLQGHGHWVNTMALSTDYALRTGA-FEPAEASVNAQDLRGSLQELKERALSRYNLV 336
Query: 315 SNQGL-LCVTADQQLLLYTTVEVPEKKMELILSKRLVGYNEEILDLKFLGEEEQYLAVAT 373
+GL V+ L+ +KK L+ R+ G+ I + F + + +A A+
Sbjct: 337 RGRGLERLVSGSDDFTLFLWSPAEDKKP---LA-RMTGHQALINQVLF-SPDSRIIASAS 391
Query: 374 NIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCC 433
+ ++++D + L GH V + A S+ L+V+GS D+++++WD +++
Sbjct: 392 FDKSIKLWDGRTGKYLASLRGH---VAAVYQIAWSADSRLLVSGSSDSTLKVWDVKAQKL 448
Query: 434 VGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVW 469
GH V AV +S Q + SG D +++W
Sbjct: 449 AADLPGHADEVYAVDWSPDGQR-VASGGKDKCLRIW 483
Score = 184 (69.8 bits), Expect = 2.2e-20, Sum P(2) = 2.2e-20
Identities = 59/200 (29%), Positives = 93/200 (46%)
Query: 28 SSDGSFIACACGES-INIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRV 86
S G ++A G++ + DLS + T +G + +++ SPD K L S + +I +
Sbjct: 123 SPTGKYLASGSGDTTVRFWDLSTETPHFTCQGHRHWVLSISWSPDGKKLASGCKNGQILL 182
Query: 87 WDLSTLKCL-RSWKGHDG--PAIG---MACHPSGGLLATAGADRKVLVWDVDGGFCTHYF 140
WD ST K + R+ GH A+ + +P +A++ D V VWD G C
Sbjct: 183 WDPSTGKQVGRALAGHSKWITALSWEPLHANPECRYVASSSKDGSVRVWDTTAGRCERIL 242
Query: 141 KGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDG 200
GH V+ + + D LL+S S D T++VW TL H V +MA+++D
Sbjct: 243 TGHTQSVTCLRWGGD---GLLYSASQDRTIKVWRAHDGVLCRTLQGHGHWVNTMALSTDY 299
Query: 201 STLISAGR--DKVVNLWDLR 218
+ A + VN DLR
Sbjct: 300 ALRTGAFEPAEASVNAQDLR 319
Score = 137 (53.3 bits), Expect = 2.2e-20, Sum P(2) = 2.2e-20
Identities = 38/131 (29%), Positives = 63/131 (48%)
Query: 392 LAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSK 451
+ GH ++ + S +I + S D S++LWD + + GH+ AV +A+S
Sbjct: 368 MTGHQALI---NQVLFSPDSRIIASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSA 424
Query: 452 KLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCT 511
LVSGSSD T+KVW D Q K A + H ++ ++ +P+ V +
Sbjct: 425 D-SRLLVSGSSDSTLKVW------DVKAQ----KLAADLPGHADEVYAVDWSPDGQRVAS 473
Query: 512 GSQDRTACVWR 522
G +D+ +WR
Sbjct: 474 GGKDKCLRIWR 484
Score = 136 (52.9 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 44/170 (25%), Positives = 79/170 (46%)
Query: 489 VVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVT-FRGHKRGIWSVEFSPV 547
++++ GK + S AV + ++ Q + V+R+ + + GH + SV FSP
Sbjct: 69 IISSLGKTLESQAVE-TEKVLDIIYQPQA--VFRVRAVTRCTSSLEGHSEAVISVAFSPT 125
Query: 548 DQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTV 607
+ + + SGD T++ W +S + T +GH VL S+ G ++ S +G + LW
Sbjct: 126 GKYLASGSGDTTVRFWDLSTETPHFTCQGHRHWVLSISWSPDGKKLASGCKNGQILLWDP 185
Query: 608 RTGE----CIATYDKHEDKI-WA-LAVGKKTEMFATGGSDALVNLWHDST 651
TG+ +A + K + W L + A+ D V +W D+T
Sbjct: 186 STGKQVGRALAGHSKWITALSWEPLHANPECRYVASSSKDGSVRVW-DTT 234
>MGI|MGI:1858197 [details] [associations]
symbol:Plrg1 "pleiotropic regulator 1, PRL1 homolog
(Arabidopsis)" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005681 "spliceosomal complex" evidence=IEA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0008380 "RNA splicing"
evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1858197 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016607
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397
GO:GO:0071013 CTD:5356 GeneTree:ENSGT00700000104496
HOGENOM:HOG000207595 HOVERGEN:HBG053621 KO:K12862 OMA:ITAEADK
OrthoDB:EOG4M65HB EMBL:AF044334 EMBL:AK075993 EMBL:AK076007
EMBL:AK077197 EMBL:BC006750 EMBL:BC052895 IPI:IPI00331172
RefSeq:NP_058064.2 UniGene:Mm.286349 ProteinModelPortal:Q922V4
SMR:Q922V4 STRING:Q922V4 PhosphoSite:Q922V4 PaxDb:Q922V4
PRIDE:Q922V4 Ensembl:ENSMUST00000150268 GeneID:53317 KEGG:mmu:53317
UCSC:uc008ppi.1 InParanoid:Q922V4 NextBio:310109 Bgee:Q922V4
Genevestigator:Q922V4 GermOnline:ENSMUSG00000027998 Uniprot:Q922V4
Length = 513
Score = 235 (87.8 bits), Expect = 2.2e-20, Sum P(2) = 2.2e-20
Identities = 52/187 (27%), Positives = 86/187 (45%)
Query: 33 FIACACGESINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTL 92
F+ + +I I DL++ +K ++ G T+ + +S LFS G ++++ WDL
Sbjct: 218 FVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVIVSTRSPYLFSCGEDKQVKCWDLEYN 277
Query: 93 KCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILF 152
K +R + GH G+ HP+ +L T D +WDV H GH V+++
Sbjct: 278 KVIRHYHGHLSAVYGLDLHPTLDVLVTCSRDSTARIWDVRTKASVHTLSGHTNAVATV-- 335
Query: 153 HPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVV 212
+ + +GS D T+R+WDL+A K TL H V ++ + T S D +
Sbjct: 336 RCQAAEPQIITGSHDTTIRLWDLVAGKTRVTLTNHKKSVRAVVLHPLLYTFASGSPDNIK 395
Query: 213 NLWDLRD 219
W D
Sbjct: 396 Q-WKFPD 401
Score = 218 (81.8 bits), Expect = 1.5e-14, P = 1.5e-14
Identities = 74/259 (28%), Positives = 109/259 (42%)
Query: 391 VLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFS 450
V++GH V C+ A+ G VTGS D ++++WD S TGH+ V V S
Sbjct: 198 VISGHLGWVRCI---AVEPGNQWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVIVS 254
Query: 451 KKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHG--KDINSLAVAPNDSL 508
+ +L S D +K W D E N K + HG + L + P +
Sbjct: 255 TR-SPYLFSCGEDKQVKCW-------DLEY--N---KVIRHYHGHLSAVYGLDLHPTLDV 301
Query: 509 VCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDG 568
+ T S+D TA +W + SV T GH + +V + +IT S D TI++W + G
Sbjct: 302 LVTCSRDSTARIWDVRTKASVHTLSGHTNAVATVRCQAAEPQIITGSHDTTIRLWDLVAG 361
Query: 569 SCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAV 628
T H SV RA L + G+ +K W G I H I LAV
Sbjct: 362 KTRVTLTNHKKSV-RAVVLHPLLYTFASGSPDNIKQWKFPDGGFIQNLSGHNAIINTLAV 420
Query: 629 GKKTEMFATGGSDALVNLW 647
+ +G + ++LW
Sbjct: 421 NADG-VLVSGADNGTMHLW 438
Score = 211 (79.3 bits), Expect = 1.1e-17, Sum P(2) = 1.1e-17
Identities = 50/185 (27%), Positives = 86/185 (46%)
Query: 56 IEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPSGG 115
I G + +A+ P ++ + R I++WDL++ K S GH G+
Sbjct: 199 ISGHLGWVRCIAVEPGNQWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVIVSTRSP 258
Query: 116 LLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDL 175
L + G D++V WD++ ++ GH V + HP D +L + S D+T R+WD+
Sbjct: 259 YLFSCGEDKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTLD--VLVTCSRDSTARIWDV 316
Query: 176 LAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYEM-VEA 234
K V TL H + V ++ + +I+ D + LWDL ++T+ ++ V A
Sbjct: 317 RTKASVHTLSGHTNAVATVRCQAAEPQIITGSHDTTIRLWDLVAGKTRVTLTNHKKSVRA 376
Query: 235 VCAIP 239
V P
Sbjct: 377 VVLHP 381
Score = 182 (69.1 bits), Expect = 1.4e-10, P = 1.4e-10
Identities = 61/246 (24%), Positives = 106/246 (43%)
Query: 367 QYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLW 426
Q+ + ++++DL+S L GH V + +S+ + + +D V+ W
Sbjct: 216 QWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGV---IVSTRSPYLFSCGEDKQVKCW 272
Query: 427 DSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKA 486
D E + GH+ AV + L + LV+ S D T ++W + KA
Sbjct: 273 DLEYNKVIRHYHGHLSAVYGLDLHPTL-DVLVTCSRDSTARIWD-----------VRTKA 320
Query: 487 KA-VVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFS 545
++ H + ++ + + TGS D T +W L + VT HK+ + +V
Sbjct: 321 SVHTLSGHTNAVATVRCQAAEPQIITGSHDTTIRLWDLVAGKTRVTLTNHKKSVRAVVLH 380
Query: 546 PVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGAD-GLVKL 604
P+ + S D IK W DG ++ GH ++++ + +VS GAD G + L
Sbjct: 381 PLLYTFASGSPDN-IKQWKFPDGGFIQNLSGH-NAIINTLAVNADGVLVS-GADNGTMHL 437
Query: 605 WTVRTG 610
W RTG
Sbjct: 438 WDWRTG 443
Score = 175 (66.7 bits), Expect = 7.9e-10, P = 7.9e-10
Identities = 40/163 (24%), Positives = 66/163 (40%)
Query: 485 KAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEF 544
K V++ H + +AV P + TGS DRT +W L ++ GH + V
Sbjct: 194 KLYRVISGHLGWVRCIAVEPGNQWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVIV 253
Query: 545 SPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKL 604
S + + DK +K W + ++ + GH S+V +V+C D ++
Sbjct: 254 STRSPYLFSCGEDKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTLDVLVTCSRDSTARI 313
Query: 605 WTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLW 647
W VRT + T H + + + TG D + LW
Sbjct: 314 WDVRTKASVHTLSGHTNAVATVRCQAAEPQIITGSHDTTIRLW 356
Score = 171 (65.3 bits), Expect = 2.2e-09, P = 2.2e-09
Identities = 56/227 (24%), Positives = 97/227 (42%)
Query: 25 LVVSSDGSFIACACGES--INIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSR 82
++VS+ ++ +CGE + DL + G + L L P +L +
Sbjct: 251 VIVSTRSPYLF-SCGEDKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTLDVLVTCSRDS 309
Query: 83 EIRVWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKG 142
R+WD+ T + + GH + C + + T D + +WD+ G
Sbjct: 310 TARIWDVRTKASVHTLSGHTNAVATVRCQAAEPQIITGSHDTTIRLWDLVAGKTRVTLTN 369
Query: 143 HKGVVSSILFHPDTDKSLLF---SGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSD 199
HK V +++ HP LL+ SGS D ++ W + L H + + ++A+ +D
Sbjct: 370 HKKSVRAVVLHP-----LLYTFASGSPD-NIKQWKFPDGGFIQNLSGHNAIINTLAVNAD 423
Query: 200 GSTLISAGRDKVVNLWDLRDYSCKLTVPTYEMVEAVCAIPPGSAFDS 246
G L+S + ++LWD R T ++ V A A+ PGS DS
Sbjct: 424 G-VLVSGADNGTMHLWDWR------TGYNFQRVHA--AVQPGS-LDS 460
Score = 159 (61.0 bits), Expect = 4.4e-08, P = 4.4e-08
Identities = 60/257 (23%), Positives = 115/257 (44%)
Query: 312 VLPSNQGLLCVTADQQLLLYTTVEVPEKKMELILSKRLVGYNEEILDLKFLGEEEQYLAV 371
V P NQ + +AD+ + ++ ++ K++L L+ G+ + + + YL
Sbjct: 211 VEPGNQWFVTGSADRTIKIW---DLASGKLKLSLT----GHISTVRGV-IVSTRSPYLFS 262
Query: 372 ATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESR 431
+QV+ +DL GH V LD L ++VT S+D++ R+WD ++
Sbjct: 263 CGEDKQVKCWDLEYNKVIRHYHGHLSAVYGLD---LHPTLDVLVTCSRDSTARIWDVRTK 319
Query: 432 CCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVA 491
V +GH AV V + + +++GS D TI++W D ++ K + +
Sbjct: 320 ASVHTLSGHTNAVATVR-CQAAEPQIITGSHDTTIRLW--DLVAG--------KTRVTLT 368
Query: 492 AHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVV 551
H K + ++ + P +GS D W+ PD + GH I ++ + D V+
Sbjct: 369 NHKKSVRAVVLHPLLYTFASGSPDNIK-QWKFPDGGFIQNLSGHNAIINTLAVN-ADGVL 426
Query: 552 ITASGDKTIKIWSISDG 568
++ + + T+ +W G
Sbjct: 427 VSGADNGTMHLWDWRTG 443
Score = 150 (57.9 bits), Expect = 6.3e-11, Sum P(2) = 6.3e-11
Identities = 42/165 (25%), Positives = 66/165 (40%)
Query: 93 KCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILF 152
K R GH G +A P T ADR + +WD+ G GH V ++
Sbjct: 194 KLYRVISGHLGWVRCIAVEPGNQWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVIV 253
Query: 153 HPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVV 212
T LFS +D V+ WDL K + H S V + + L++ RD
Sbjct: 254 --STRSPYLFSCGEDKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTLDVLVTCSRDSTA 311
Query: 213 NLWDLRDYSCKLTVPTYEMVEAVCAIPPGSAFDSFLSSYNQQTIK 257
+WD+R + T+ + AV + +A ++ + TI+
Sbjct: 312 RIWDVRTKASVHTLSGH--TNAVATVRCQAAEPQIITGSHDTTIR 354
Score = 146 (56.5 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 57/203 (28%), Positives = 92/203 (45%)
Query: 369 LAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDS 428
L + +++D+ + + + L+GH+ V + C + +I +TGS D ++RLWD
Sbjct: 302 LVTCSRDSTARIWDVRTKASVHTLSGHTNAVATV-RCQAAEPQI--ITGSHDTTIRLWDL 358
Query: 429 ESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKA 488
+ T H +V AV L F SGS D+ IK W F D NL
Sbjct: 359 VAGKTRVTLTNHKKSVRAVVLHPLLYTF-ASGSPDN-IKQWKFP----DGGFIQNL---- 408
Query: 489 VVAAHGKDINSLAVAPNDSLVCTGSQDRTACVW--RLP---DLVSVVTFRGH---KRGIW 540
+ H IN+LAV D ++ +G+ + T +W R V G + GI+
Sbjct: 409 --SGHNAIINTLAVNA-DGVLVSGADNGTMHLWDWRTGYNFQRVHAAVQPGSLDSESGIF 465
Query: 541 SVEFSPVDQVVITASGDKTIKIW 563
+ F + ++TA DKTIK++
Sbjct: 466 ACAFDRSESRLLTAEADKTIKVY 488
Score = 83 (34.3 bits), Expect = 2.2e-20, Sum P(2) = 2.2e-20
Identities = 27/106 (25%), Positives = 57/106 (53%)
Query: 392 LAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSES-----RCCVGVGTGHMGA--- 443
L+GH+ I+ +T A+++ +L V+G+ + ++ LWD + R V G + +
Sbjct: 408 LSGHNAII---NTLAVNADGVL-VSGADNGTMHLWDWRTGYNFQRVHAAVQPGSLDSESG 463
Query: 444 VGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAV 489
+ A AF + ++ L++ +D TIKV+ D + + P++ K + +
Sbjct: 464 IFACAFDRS-ESRLLTAEADKTIKVYREDETATEETHPVSWKPEII 508
>UNIPROTKB|Q8NBT0 [details] [associations]
symbol:POC1A "POC1 centriolar protein homolog A"
species:9606 "Homo sapiens" [GO:0030030 "cell projection
organization" evidence=IEA] [GO:0005813 "centrosome" evidence=IDA]
[GO:0005932 "microtubule basal body" evidence=IDA] [GO:0005814
"centriole" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0005932 GO:GO:0030030 CTD:25886 HOVERGEN:HBG057502 KO:K16482
OMA:ANHVEFH OrthoDB:EOG412M5H EMBL:AK075289 EMBL:BC007417
EMBL:BC110877 EMBL:BC119692 EMBL:AL117629 IPI:IPI00171440
IPI:IPI00719213 PIR:T17331 RefSeq:NP_001155052.1
RefSeq:NP_001155053.1 RefSeq:NP_056241.3 UniGene:Hs.476306
ProteinModelPortal:Q8NBT0 SMR:Q8NBT0 IntAct:Q8NBT0 DMDM:91207986
PRIDE:Q8NBT0 Ensembl:ENST00000296484 Ensembl:ENST00000394970
GeneID:25886 KEGG:hsa:25886 UCSC:uc003dcu.3 UCSC:uc003dcw.3
GeneCards:GC03M052109 HGNC:HGNC:24488 HPA:HPA040600 MIM:614783
MIM:614813 neXtProt:NX_Q8NBT0 PharmGKB:PA165698089
InParanoid:Q8NBT0 PhylomeDB:Q8NBT0 GenomeRNAi:25886 NextBio:47308
ArrayExpress:Q8NBT0 Bgee:Q8NBT0 CleanEx:HS_WDR51A
Genevestigator:Q8NBT0 GermOnline:ENSG00000164087 Uniprot:Q8NBT0
Length = 407
Score = 265 (98.3 bits), Expect = 2.9e-20, P = 2.9e-20
Identities = 75/303 (24%), Positives = 136/303 (44%)
Query: 345 LSKRLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDT 404
L + G+ + + + F +Q LA + + V+ + S +Y GH + V C++
Sbjct: 11 LERHFKGHRDAVTCVDFSINTKQ-LASGSMDSCLMVWHMKPQSRAYRFTGHKDAVTCVNF 69
Query: 405 CALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDH 464
SG +L +GS+D +VR+W + V H V +V F Q+F V+ S D
Sbjct: 70 SP--SGHLL-ASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQSF-VTASDDK 125
Query: 465 TIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLP 524
T+KVW+ K ++ H + +P+ L+ + S D+T +W
Sbjct: 126 TVKVWATH----------RQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKS 175
Query: 525 DLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRA 584
V ++ H + V+F P + A D T+K+W + L+ ++ H+++V
Sbjct: 176 SRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNGL 235
Query: 585 SFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALV 644
SF G +++ +D +K+ + G + T H+ +A + E FA+GGSD V
Sbjct: 236 SFHPSGNYLITASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQV 295
Query: 645 NLW 647
+W
Sbjct: 296 MVW 298
Score = 241 (89.9 bits), Expect = 1.9e-17, P = 1.9e-17
Identities = 56/204 (27%), Positives = 100/204 (49%)
Query: 29 SDG-SFIACACGESINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRVW 87
SDG SF+ + +++ + ++ + + SPD +L+ S+ + +++W
Sbjct: 113 SDGQSFVTASDDKTVKVWATHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLW 172
Query: 88 DLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVV 147
D S+ +C+ S+ H G + HPSG +A AG D V VWDV +++ H V
Sbjct: 173 DKSSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDVRTHRLLQHYQLHSAAV 232
Query: 148 SSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAG 207
+ + FHP + L + S D+T+++ DL+ + + TL H T++A + G S G
Sbjct: 233 NGLSFHPSGN--YLITASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGG 290
Query: 208 RDKVVNLW----DLRDYSCKLTVP 227
D+ V +W D+ D+ VP
Sbjct: 291 SDEQVMVWKSNFDIVDHGEVTKVP 314
Score = 196 (74.1 bits), Expect = 2.3e-12, P = 2.3e-12
Identities = 52/174 (29%), Positives = 81/174 (46%)
Query: 51 SIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMAC 110
S++ +G D +T + S + K L S + VW + + GH +
Sbjct: 10 SLERHFKGHRDAVTCVDFSINTKQLASGSMDSCLMVWHMKPQSRAYRFTGHKDAVTCVNF 69
Query: 111 HPSGGLLATAGADRKVLVW--DVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDA 168
PSG LLA+ D+ V +W +V G + F+ H V S+ F D +S + + SDD
Sbjct: 70 SPSGHLLASGSRDKTVRIWVPNVKGE--STVFRAHTATVRSVHFCSD-GQSFV-TASDDK 125
Query: 169 TVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSC 222
TV+VW +K + +L +H + V + DG ++SA DK V LWD C
Sbjct: 126 TVKVWATHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKSSREC 179
Score = 174 (66.3 bits), Expect = 6.3e-10, P = 6.3e-10
Identities = 46/193 (23%), Positives = 85/193 (44%)
Query: 28 SSDGSFIACACGESINIVDLSNASIKSTI-EGGSDTITALALSPDDKLLFSSGHSREIRV 86
S G +A + + + N +ST+ + T+ ++ D + ++ + ++V
Sbjct: 70 SPSGHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKTVKV 129
Query: 87 WDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGV 146
W K L S H P G L+ +A D+ V +WD C H + H G
Sbjct: 130 WATHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKSSRECVHSYCEHGGF 189
Query: 147 VSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISA 206
V+ + FHP + + +G D+ TV+VWD+ + + H + V ++ G+ LI+A
Sbjct: 190 VTYVDFHP-SGTCIAAAGMDN-TVKVWDVRTHRLLQHYQLHSAAVNGLSFHPSGNYLITA 247
Query: 207 GRDKVVNLWDLRD 219
D + + DL +
Sbjct: 248 SSDSTLKILDLME 260
Score = 169 (64.5 bits), Expect = 2.2e-09, P = 2.2e-09
Identities = 38/159 (23%), Positives = 65/159 (40%)
Query: 493 HGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVI 552
H + + + N + +GS D VW + F GHK + V FSP ++
Sbjct: 18 HRDAVTCVDFSINTKQLASGSMDSCLMVWHMKPQSRAYRFTGHKDAVTCVNFSPSGHLLA 77
Query: 553 TASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGEC 612
+ S DKT++IW + F HT++V F + G V+ D VK+W +
Sbjct: 78 SGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKTVKVWATHRQKF 137
Query: 613 IATYDKHEDKIWALAVGKKTEMFATGGSDALVNLWHDST 651
+ + +H + + + + D V LW S+
Sbjct: 138 LFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKSS 176
Score = 126 (49.4 bits), Expect = 0.00012, P = 0.00012
Identities = 72/305 (23%), Positives = 121/305 (39%)
Query: 139 YFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITS 198
+FKGH+ V+ + F +T + L SGS D+ + VW + + H VT + +
Sbjct: 14 HFKGHRDAVTCVDFSINTKQ--LASGSMDSCLMVWHMKPQSRAYRFTGHKDAVTCVNFSP 71
Query: 199 DGSTLISAGRDKVVNLW--DLRDYSCKLTVPTYEMVEAVCAIPPGSAFDSFLSSYNQQTI 256
G L S RDK V +W +++ S T V +V G SF+++ + +T+
Sbjct: 72 SGHLLASGSRDKTVRIWVPNVKGESTVFRAHT-ATVRSVHFCSDGQ---SFVTASDDKTV 127
Query: 257 KKKRRSLEIHFITVGER-GIVRM--WNADSACLYEQKSSDVTISFEMDDSKR-------- 305
K + ++ + VR ++ D L S D T+ D S R
Sbjct: 128 KVWATHRQKFLFSLSQHINWVRCAKFSPDGR-LIVSASDDKTVKL-WDKSSRECVHSYCE 185
Query: 306 --GFTAATVLPSNQGLLCVTADQQLLLYTTVEVPEKKMELILSKRLVGYNEEILDLKFLG 363
GF T + + C+ A + TV+V + + +L + ++ + L F
Sbjct: 186 HGGFV--TYVDFHPSGTCIAAAG---MDNTVKVWDVRTHRLLQHYQL-HSAAVNGLSF-H 238
Query: 364 EEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSV 423
YL A++ +++ DL Y L GH T A S +G D V
Sbjct: 239 PSGNYLITASSDSTLKILDLMEGRLLYTLHGHQGPAT---TVAFSRTGEYFASGGSDEQV 295
Query: 424 RLWDS 428
+W S
Sbjct: 296 MVWKS 300
>DICTYBASE|DDB_G0293070 [details] [associations]
symbol:DDB_G0293070 "TROVE domain-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0030529
"ribonucleoprotein complex" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA;ISS] [GO:0005697 "telomerase holoenzyme complex"
evidence=ISS] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR008858
InterPro:IPR015943 Pfam:PF00400 Pfam:PF05731 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50988 SMART:SM00320
dictyBase:DDB_G0293070 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003723 EMBL:AAFI02000199
GO:GO:0005697 KO:K11127 InterPro:IPR025139 Pfam:PF13271
RefSeq:XP_629304.1 ProteinModelPortal:Q54CB5 PRIDE:Q54CB5
EnsemblProtists:DDB0237515 GeneID:8629027 KEGG:ddi:DDB_G0293070
InParanoid:Q54CB5 OMA:LPSDWIE ProtClustDB:CLSZ2429313
Uniprot:Q54CB5
Length = 2430
Score = 280 (103.6 bits), Expect = 3.0e-20, P = 3.0e-20
Identities = 129/594 (21%), Positives = 241/594 (40%)
Query: 51 SIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMAC 110
S K TI G D TA S D ++ S+G I ++ S L + GH +
Sbjct: 1513 SCKQTITGLEDGATACCYSRDGSMIASAGKDSIIHIFKASNGSELLTLVGHSNWISCFSF 1572
Query: 111 HPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATV 170
G LA++ D V+VWD+ G H FK H V+ F P T +LL S + D+++
Sbjct: 1573 SDDGKTLASSSWDNTVIVWDLIVGNQIHQFKDHSRAVNYCEFSP-TANNLLMSCAWDSSI 1631
Query: 171 RVWDLLAKKCVATL-DKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTY 229
+++ K H V S + DG+ + S+ D + +W+ D K +
Sbjct: 1632 IIFNTSDKNIFRNFRSAHSKPVNSCCWSPDGTLIASSSWDGTIKIWNPFDTIAKDRLK-- 1689
Query: 230 EMVEAVCAIPPGSAFDSFLSSYNQQTIKKKRRSLEIHFITVGERGIVRMWNADSACLYEQ 289
+++A ++ GS S+ ++Q + ++ + F ++ I M N + +
Sbjct: 1690 HVIDA--SLSYGSIKSCKFSANSKQILATTMKNDVLLFDVNSQKLISVMGNHSKSVNHCS 1747
Query: 290 KSSDVT-ISFEMDDSKRGFTAATV--------LPSNQGLLCV--TADQQLLLY----TTV 334
S+D I DD+ ++T+ +P + C+ + Q LL TV
Sbjct: 1748 LSNDGNYIVTGSDDATAKVWSSTLGTQLTNFLIPGDCWANCLAFSPTQPLLAVGATDCTV 1807
Query: 335 EVPEKKMELILSK--RLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVL 392
+ + I + +L G+ I + F +A + ++V+++ + Y +
Sbjct: 1808 RLFDVSSNTIYREVAKLHGHTRAITSITF-SPSGNLIASTSEDLLIKVWNVQTHKAEYTI 1866
Query: 393 A-GHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSK 451
H++ + C+ + ++ ++ S D S ++W + G + +S
Sbjct: 1867 EKAHNDPINCISFNPTNECEL--ISCSDDYSTKVWSRFTTSTTLSTEGSTNTIKHCVYSP 1924
Query: 452 KLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCT 511
++ + S D +I V+ L + LK H +N +P+ + +
Sbjct: 1925 D-GKYIATVSRDCSIAVY----LCSSKKLLFRLKG------HTDWVNFCTFSPDSKKLVS 1973
Query: 512 GSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCL 571
G D VW + ++ +GH I F+ + +I+AS D ++K+W GS +
Sbjct: 1974 GGWDFNLRVWNIKTQKELLCLKGHSSSIEKAFFTKDQKYIISASFDGSVKVWDAQFGSEI 2033
Query: 572 KTFEGHT--SSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKI 623
+ T S V+ +S +I S DG++K W G C+AT H I
Sbjct: 2034 TSLRHQTRISDVVSSS--DASGRIFSSSDDGIIKSWYPVAGSCLATLTGHSGPI 2085
Score = 224 (83.9 bits), Expect = 3.3e-14, P = 3.3e-14
Identities = 114/514 (22%), Positives = 206/514 (40%)
Query: 157 DKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWD 216
D S++ S D+ + ++ + TL H + ++ + + DG TL S+ D V +WD
Sbjct: 1533 DGSMIASAGKDSIIHIFKASNGSELLTLVGHSNWISCFSFSDDGKTLASSSWDNTVIVWD 1592
Query: 217 LRDYSCKLTVPTYEMVEAVCAIPPGS-------AFDSFLSSYNQQTIKKKRRSLEIHFIT 269
L + + C P + A+DS + +N R H
Sbjct: 1593 LIVGNQIHQFKDHSRAVNYCEFSPTANNLLMSCAWDSSIIIFNTSDKNIFRNFRSAHSKP 1652
Query: 270 VGERGIVRMWNADSACLYEQKSSDVTISF--EMDDSKRGFTAATVLPS-NQGLL--C-VT 323
V W+ D L S D TI D + + S + G + C +
Sbjct: 1653 VNSC----CWSPDGT-LIASSSWDGTIKIWNPFDTIAKDRLKHVIDASLSYGSIKSCKFS 1707
Query: 324 ADQQLLLYTTVEVPEKKMELILSKRLV---GYNEEILDLKFLGEEEQYLAVATNIEQVQV 380
A+ + +L TT++ + + S++L+ G + + ++ L + Y+ ++ +V
Sbjct: 1708 ANSKQILATTMKNDVLLFD-VNSQKLISVMGNHSKSVNHCSLSNDGNYIVTGSDDATAKV 1766
Query: 381 YD--LSSMSCSYVLAGHSEIVLCLDTC-ALSSGKILIVTGSKDNSVRLWDSESRCC---V 434
+ L + ++++ G C C A S + L+ G+ D +VRL+D S V
Sbjct: 1767 WSSTLGTQLTNFLIPGD-----CWANCLAFSPTQPLLAVGATDCTVRLFDVSSNTIYREV 1821
Query: 435 GVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHG 494
GH A+ ++ FS N + S S D IKVW+ + AE + AH
Sbjct: 1822 AKLHGHTRAITSITFSPS-GNLIASTSEDLLIKVWNVQ--THKAEY-------TIEKAHN 1871
Query: 495 KDINSLAVAP-NDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVIT 553
IN ++ P N+ + + S D + VW + ++ G I +SP + + T
Sbjct: 1872 DPINCISFNPTNECELISCSDDYSTKVWSRFTTSTTLSTEGSTNTIKHCVYSPDGKYIAT 1931
Query: 554 ASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECI 613
S D +I ++ S L +GHT V +F ++VS G D +++W ++T + +
Sbjct: 1932 VSRDCSIAVYLCSSKKLLFRLKGHTDWVNFCTFSPDSKKLVSGGWDFNLRVWNIKTQKEL 1991
Query: 614 ATYDKHEDKIWALAVGKKTEMFATGGSDALVNLW 647
H I K + + D V +W
Sbjct: 1992 LCLKGHSSSIEKAFFTKDQKYIISASFDGSVKVW 2025
Score = 223 (83.6 bits), Expect = 4.3e-14, P = 4.3e-14
Identities = 109/491 (22%), Positives = 207/491 (42%)
Query: 180 CVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYE-MVEAVCAI 238
C T+ T+ + DGS + SAG+D +++++ + S LT+ + +
Sbjct: 1514 CKQTITGLEDGATACCYSRDGSMIASAGKDSIIHIFKASNGSELLTLVGHSNWISCFSFS 1573
Query: 239 PPGSAFDSFLSSYNQQTIKKKRR-SLEIHFITVGERGIVRMWNADSA--CLYEQKSSDVT 295
G S SS++ I +IH R + + +A L
Sbjct: 1574 DDGKTLAS--SSWDNTVIVWDLIVGNQIHQFKDHSRAVNYCEFSPTANNLLMSCAWDSSI 1631
Query: 296 ISFEMDDSK--RGFTAATVLPSNQ------GLLCVTA--DQQLLLYTTVE-VPEKKMELI 344
I F D R F +A P N G L ++ D + ++ + + + +++ +
Sbjct: 1632 IIFNTSDKNIFRNFRSAHSKPVNSCCWSPDGTLIASSSWDGTIKIWNPFDTIAKDRLKHV 1691
Query: 345 LSKRLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDT 404
+ L Y I KF +Q LA T V ++D++S V+ HS+ V +
Sbjct: 1692 IDASL-SYGS-IKSCKFSANSKQILAT-TMKNDVLLFDVNSQKLISVMGNHSKSV---NH 1745
Query: 405 CALSSGKILIVTGSKDNSVRLWDSE--SRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSS 462
C+LS+ IVTGS D + ++W S ++ + G A +AFS Q L G++
Sbjct: 1746 CSLSNDGNYIVTGSDDATAKVWSSTLGTQLTNFLIPGDCWA-NCLAFSPT-QPLLAVGAT 1803
Query: 463 DHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWR 522
D T+++ FD S+ + + A + H + I S+ +P+ +L+ + S+D VW
Sbjct: 1804 DCTVRL--FDVSSNTIYREV-----AKLHGHTRAITSITFSPSGNLIASTSEDLLIKVWN 1856
Query: 523 LPDLVSVVTF-RGHKRGIWSVEFSPVDQV-VITASGDKTIKIWSISDGSCLKTFEGHTSS 580
+ + T + H I + F+P ++ +I+ S D + K+WS S + EG T++
Sbjct: 1857 VQTHKAEYTIEKAHNDPINCISFNPTNECELISCSDDYSTKVWSRFTTSTTLSTEGSTNT 1916
Query: 581 VLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGS 640
+ + G I + D + ++ + + + H D + ++ +GG
Sbjct: 1917 IKHCVYSPDGKYIATVSRDCSIAVYLCSSKKLLFRLKGHTDWVNFCTFSPDSKKLVSGGW 1976
Query: 641 DALVNLWHDST 651
D + +W+ T
Sbjct: 1977 DFNLRVWNIKT 1987
Score = 195 (73.7 bits), Expect = 4.4e-11, P = 4.4e-11
Identities = 94/495 (18%), Positives = 201/495 (40%)
Query: 145 GVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLI 204
G + S F ++ + L + +D V ++D+ ++K ++ + H V ++++DG+ ++
Sbjct: 1699 GSIKSCKFSANSKQILATTMKND--VLLFDVNSQKLISVMGNHSKSVNHCSLSNDGNYIV 1756
Query: 205 SAGRDKVVNLWD------LRDY----SCKLTVPTYEMVEAVCAIPPGSAFDSFLSSYNQQ 254
+ D +W L ++ C + + + A+ A D + ++
Sbjct: 1757 TGSDDATAKVWSSTLGTQLTNFLIPGDCWANCLAFSPTQPLLAV---GATDCTVRLFDVS 1813
Query: 255 TIKKKRRSLEIHFITVGERGIVRMWNADSACLYEQKSSDVTIS-FEMDDSKRGFTAATVL 313
+ R ++H T R I + + S L S D+ I + + K +T
Sbjct: 1814 SNTIYREVAKLHGHT---RAITSITFSPSGNLIASTSEDLLIKVWNVQTHKAEYTIEKA- 1869
Query: 314 PSNQGLLCVT---ADQQLLLYTTVEVPEKKMELILSKRLVGYNEEILDLKFL--GEEEQY 368
N + C++ ++ L+ + + K + + +K + +Y
Sbjct: 1870 -HNDPINCISFNPTNECELISCSDDYSTKVWSRFTTSTTLSTEGSTNTIKHCVYSPDGKY 1928
Query: 369 LAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDS 428
+A + + VY SS + L GH++ V + C S +V+G D ++R+W+
Sbjct: 1929 IATVSRDCSIAVYLCSSKKLLFRLKGHTDWV---NFCTFSPDSKKLVSGGWDFNLRVWNI 1985
Query: 429 ESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKA 488
+++ + GH ++ F+K Q +++S S D ++KVW S+ +
Sbjct: 1986 KTQKELLCLKGHSSSIEKAFFTKD-QKYIISASFDGSVKVWDAQFGSEITSLRHQTRISD 2044
Query: 489 VVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDL---VSVVTFRGHKRGIWSVEFS 545
VV++ + + +D ++ + +C+ L + V F + G S FS
Sbjct: 2045 VVSSSDAS-GRIFSSSDDGIIKSWYPVAGSCLATLTGHSGPIKQVQFNPNSGGGGSSSFS 2103
Query: 546 -----------PVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIV 594
PV + ++S D T+K+W + S T H S+ + F G +
Sbjct: 2104 SFSSFSSSSDAPVTLSIASSSDDGTVKLWEFN--SATATTSAHKGSINQCVFSKDGKYVA 2161
Query: 595 SCGADGLVKLWTVRT 609
+CG D ++ +W +T
Sbjct: 2162 TCGQDCVLNIWDAKT 2176
Score = 178 (67.7 bits), Expect = 1.9e-12, Sum P(2) = 1.9e-12
Identities = 61/260 (23%), Positives = 109/260 (41%)
Query: 28 SSDGSFIACACGESINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRVW 87
+++ I+C+ S + S + EG ++TI SPD K + + I V+
Sbjct: 1882 TNECELISCSDDYSTKVWSRFTTSTTLSTEGSTNTIKHCVYSPDGKYIATVSRDCSIAVY 1941
Query: 88 DLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVV 147
S+ K L KGH P L + G D + VW++ KGH +
Sbjct: 1942 LCSSKKLLFRLKGHTDWVNFCTFSPDSKKLVSGGWDFNLRVWNIKTQKELLCLKGHSSSI 2001
Query: 148 SSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGS-TLISA 206
F D+ + S S D +V+VWD + +L +H +R++ + +SD S + S+
Sbjct: 2002 EKAFF--TKDQKYIISASFDGSVKVWDAQFGSEITSL-RHQTRISDVVSSSDASGRIFSS 2058
Query: 207 GRDKVVNLWDLRDYSCKLTVPTYE-MVEAVCAIP-PGSAFDSFLSSYNQQTIKKKRRSLE 264
D ++ W SC T+ + ++ V P G S SS++ + +
Sbjct: 2059 SDDGIIKSWYPVAGSCLATLTGHSGPIKQVQFNPNSGGGGSSSFSSFSSFS-SSSDAPVT 2117
Query: 265 IHFITVGERGIVRMWNADSA 284
+ + + G V++W +SA
Sbjct: 2118 LSIASSSDDGTVKLWEFNSA 2137
Score = 177 (67.4 bits), Expect = 2.5e-12, Sum P(2) = 2.5e-12
Identities = 49/163 (30%), Positives = 73/163 (44%)
Query: 26 VVSSDGSFIACACGE-SINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREI 84
V S DG +IA + SI + S+ + ++G +D + SPD K L S G +
Sbjct: 1921 VYSPDGKYIATVSRDCSIAVYLCSSKKLLFRLKGHTDWVNFCTFSPDSKKLVSGGWDFNL 1980
Query: 85 RVWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHK 144
RVW++ T K L KGH + +A D V VWD G + H+
Sbjct: 1981 RVWNIKTQKELLCLKGHSSSIEKAFFTKDQKYIISASFDGSVKVWDAQFGSEITSLR-HQ 2039
Query: 145 GVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKH 187
+S ++ D +FS SDD ++ W +A C+ATL H
Sbjct: 2040 TRISDVVSSSDAS-GRIFSSSDDGIIKSWYPVAGSCLATLTGH 2081
Score = 160 (61.4 bits), Expect = 1.6e-10, Sum P(2) = 1.6e-10
Identities = 54/199 (27%), Positives = 90/199 (45%)
Query: 28 SSDGSFIACACGESI-NIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRV 86
S DGS IA A +SI +I SN S T+ G S+ I+ + S D K L SS + V
Sbjct: 1531 SRDGSMIASAGKDSIIHIFKASNGSELLTLVGHSNWISCFSFSDDGKTLASSSWDNTVIV 1590
Query: 87 WDLSTLKCLRSWKGHDGPAIGMACHPSGG-LLATAGADRKVLVWDV-DGGFCTHYFKGHK 144
WDL + +K H P+ LL + D +++++ D ++ H
Sbjct: 1591 WDLIVGNQIHQFKDHSRAVNYCEFSPTANNLLMSCAWDSSIIIFNTSDKNIFRNFRSAHS 1650
Query: 145 GVVSSILFHPDTDKSLLFSGSDDATVRVW---DLLAK---KCVATLDKHFSRVTSMAITS 198
V+S + PD +L+ S S D T+++W D +AK K V + + S ++
Sbjct: 1651 KPVNSCCWSPDG--TLIASSSWDGTIKIWNPFDTIAKDRLKHVIDASLSYGSIKSCKFSA 1708
Query: 199 DGSTLISAGRDKVVNLWDL 217
+ +++ V L+D+
Sbjct: 1709 NSKQILATTMKNDVLLFDV 1727
Score = 147 (56.8 bits), Expect = 6.4e-06, P = 6.4e-06
Identities = 117/569 (20%), Positives = 212/569 (37%)
Query: 116 LLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWD- 174
+LAT VL++DV+ H V+ D + + +GSDDAT +VW
Sbjct: 1713 ILATT-MKNDVLLFDVNSQKLISVMGNHSKSVNHCSL--SNDGNYIVTGSDDATAKVWSS 1769
Query: 175 LLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPT-YEMVE 233
L + L +A + L D V L+D+ + V +
Sbjct: 1770 TLGTQLTNFLIPGDCWANCLAFSPTQPLLAVGATDCTVRLFDVSSNTIYREVAKLHGHTR 1829
Query: 234 AVCAI---PPGSAF-----DSFLSSYNQQTIKKKRRSLEIH--------FITVGERGIVR 277
A+ +I P G+ D + +N QT K + + H F E ++
Sbjct: 1830 AITSITFSPSGNLIASTSEDLLIKVWNVQTHKAEYTIEKAHNDPINCISFNPTNECELIS 1889
Query: 278 MWNADSACLYEQKSSDVTISFEMDDSKRGFTAATVLPSNQGLLCVTADQQLLLYTTVEVP 337
+ S ++ + ++ T+S E S P + + V+ D + +Y
Sbjct: 1890 CSDDYSTKVWSRFTTSTTLSTE--GSTNTIKHCVYSPDGKYIATVSRDCSIAVYLC---S 1944
Query: 338 EKKMELILSKRLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSE 397
KK+ RL G+ + + F + ++ ++ + ++V+++ + L GHS
Sbjct: 1945 SKKLLF----RLKGHTDWVNFCTFSPDSKKLVSGGWDFN-LRVWNIKTQKELLCLKGHSS 1999
Query: 398 IVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFL 457
+ + + + I++ S D SV++WD++ + H + V S +
Sbjct: 2000 SI---EKAFFTKDQKYIISASFDGSVKVWDAQFGSEI-TSLRHQTRISDVVSSSDASGRI 2055
Query: 458 VSGSSDHTIKVW---------SFDGLSDDAEQ----PMNLKAKAVVAAHGKDINSLAVAP 504
S S D IK W + G S +Q P + + + +S + AP
Sbjct: 2056 FSSSDDGIIKSWYPVAGSCLATLTGHSGPIKQVQFNPNSGGGGSSSFSSFSSFSSSSDAP 2115
Query: 505 NDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWS 564
+ + S D T +W + T HK I FS + V T D + IW
Sbjct: 2116 VTLSIASSSDDGTVKLWEFNS--ATATTSAHKGSINQCVFSKDGKYVATCGQDCVLNIWD 2173
Query: 565 ISDGSCLKT--FEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDK 622
LKT FE S V SF G + DG +++++ + + + +K K
Sbjct: 2174 AKTHINLKTMIFE---SPVTTCSFNRSGVLFIGL-QDGTLEVYS-KDWKTVLHKEKTNGK 2228
Query: 623 IWALAVGKKTEMFATGGSDALVNLWHDST 651
I + + +T D ++L+ ST
Sbjct: 2229 ITRSSAHPSLNIQSTESPD-YIDLFAFST 2256
Score = 120 (47.3 bits), Expect = 2.7e-06, Sum P(2) = 2.7e-06
Identities = 52/227 (22%), Positives = 96/227 (42%)
Query: 34 IACACGESINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLK 93
+A + + D+++ + S + S ++ +LS D + + +VW STL
Sbjct: 1714 LATTMKNDVLLFDVNSQKLISVMGNHSKSVNHCSLSNDGNYIVTGSDDATAKVWS-STLG 1772
Query: 94 C-LRSWK-GHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHY-----FKGHKGV 146
L ++ D A +A P+ LLA D V ++DV T Y GH
Sbjct: 1773 TQLTNFLIPGDCWANCLAFSPTQPLLAVGATDCTVRLFDVSSN--TIYREVAKLHGHTRA 1830
Query: 147 VSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDK-HFSRVTSMAIT-SDGSTLI 204
++SI F P + L+ S S+D ++VW++ K T++K H + ++ ++ LI
Sbjct: 1831 ITSITFSPSGN--LIASTSEDLLIKVWNVQTHKAEYTIEKAHNDPINCISFNPTNECELI 1888
Query: 205 SAGRDKVVNLWDLRDYSCKLTVPTYEMVEAV--CAIPPGSAFDSFLS 249
S D +W ++ T+ T + C P + + +S
Sbjct: 1889 SCSDDYSTKVWSR--FTTSTTLSTEGSTNTIKHCVYSPDGKYIATVS 1933
Score = 85 (35.0 bits), Expect = 1.9e-12, Sum P(2) = 1.9e-12
Identities = 42/227 (18%), Positives = 96/227 (42%)
Query: 404 TCALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSD 463
TC+ + +L + G +D ++ ++ + + + + G + + L N + S D
Sbjct: 2191 TCSFNRSGVLFI-GLQDGTLEVYSKDWKTVLHKEKTN-GKITRSSAHPSL-NIQSTESPD 2247
Query: 464 HTIKVWSFDGLSDDAEQPMNLKAKAV--VAAHGKDINSLAVAPNDSLVCTGSQDRTACVW 521
+ I +++F ++ +N K + + + S+ + + L+ GS+ + ++
Sbjct: 2248 Y-IDLFAFSTWTNCVNL-LNCSEKYFDPIVSFDDWVESVEFSTSGDLLAAGSRTKQVKIF 2305
Query: 522 RLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSV 581
P VT + + S+ FSP D+ + + D T+++ I+ G + SS+
Sbjct: 2306 S-PLNDKPVTHQTSSSYVTSLSFSPNDKYLAIGTFDGTVELLDIASGKLRRILTTQVSSI 2364
Query: 582 LRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAV 628
FL ++VS D + +W T I H+ I ++ +
Sbjct: 2365 TSLKFLD-STRLVSVSNDRSLIVWNFSTSS-IENEFIHQSPITSMDI 2409
Score = 50 (22.7 bits), Expect = 7.9e-09, Sum P(2) = 7.9e-09
Identities = 18/72 (25%), Positives = 34/72 (47%)
Query: 356 ILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIV 415
+ L F ++YLA+ T V++ D++S +L + L L S +++ V
Sbjct: 2322 VTSLSF-SPNDKYLAIGTFDGTVELLDIASGKLRRILTTQVSSITSLKF--LDSTRLVSV 2378
Query: 416 TGSKDNSVRLWD 427
S D S+ +W+
Sbjct: 2379 --SNDRSLIVWN 2388
>RGD|1359721 [details] [associations]
symbol:Btrc "beta-transducin repeat containing E3 ubiquitin
protein ligase" species:10116 "Rattus norvegicus" [GO:0000209
"protein polyubiquitination" evidence=IEA;ISO] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA;ISO] [GO:0006470
"protein dephosphorylation" evidence=IEA;ISO] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA;ISO]
[GO:0008013 "beta-catenin binding" evidence=IEA;ISO] [GO:0016567
"protein ubiquitination" evidence=ISO] [GO:0019005 "SCF ubiquitin
ligase complex" evidence=IEA;ISO] [GO:0030163 "protein catabolic
process" evidence=ISO] [GO:0031648 "protein destabilization"
evidence=IEA;ISO] [GO:0033598 "mammary gland epithelial cell
proliferation" evidence=IEA;ISO] [GO:0042753 "positive regulation
of circadian rhythm" evidence=IEA;ISO] [GO:0043122 "regulation of
I-kappaB kinase/NF-kappaB cascade" evidence=IEA;ISO] [GO:0045309
"protein phosphorylated amino acid binding" evidence=IEA;ISO]
[GO:0045862 "positive regulation of proteolysis" evidence=IEA;ISO]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IEA;ISO] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA;ISO] [GO:0046983
"protein dimerization activity" evidence=IEA] [GO:0051726
"regulation of cell cycle" evidence=IEA;ISO] [GO:0060444 "branching
involved in mammary gland duct morphogenesis" evidence=IEA;ISO]
[GO:0061136 "regulation of proteasomal protein catabolic process"
evidence=IEA;ISO] [GO:0071407 "cellular response to organic cyclic
compound" evidence=IEA;ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
RGD:1359721 GO:GO:0045892 GO:GO:0045893 GO:GO:0006470
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GO:GO:0051726 GO:GO:0006511 GO:GO:0019005
GO:GO:0045862 GO:GO:0000209 GO:GO:0071407 GO:GO:0061136
GO:GO:0031648 GO:GO:0043122 GO:GO:0060444 GO:GO:0033598
GO:GO:0042753 CTD:8945 HOGENOM:HOG000006638 HOVERGEN:HBG002521
KO:K03362 OrthoDB:EOG4F1X2M EMBL:BC085125 IPI:IPI00951294
RefSeq:NP_001007149.2 UniGene:Rn.21800 SMR:Q5U4E5 STRING:Q5U4E5
Ensembl:ENSRNOT00000064259 GeneID:361765 KEGG:rno:361765
UCSC:RGD:1359721 InParanoid:Q5U4E5 NextBio:677539
Genevestigator:Q5U4E5 Uniprot:Q5U4E5
Length = 506
Score = 269 (99.8 bits), Expect = 3.2e-20, P = 3.2e-20
Identities = 61/221 (27%), Positives = 116/221 (52%)
Query: 414 IVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDG 473
IV+G +DN++++WD + C + TGH G+V + + +++ +++GSSD T++VW +
Sbjct: 217 IVSGLRDNTIKIWDKSTLECKRILTGHTGSVLCLQYDERV---IITGSSDSTVRVWDVN- 272
Query: 474 LSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFR 533
A + +N + H + + L N+ ++ T S+DR+ VW + + R
Sbjct: 273 ----AGEMLN-----TLIHHCEAVLHLRF--NNGMMVTCSKDRSIAVWDMASPTDITLRR 321
Query: 534 ---GHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRG 590
GH+ + V+F D+ +++ASGD+TIK+W+ S ++T GH + A R
Sbjct: 322 VLVGHRAAVNVVDFD--DKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGI--ACLQYRD 377
Query: 591 AQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKK 631
+VS +D ++LW + G C+ + HE+ + + K
Sbjct: 378 RLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNK 418
Score = 252 (93.8 bits), Expect = 2.5e-18, P = 2.5e-18
Identities = 70/244 (28%), Positives = 120/244 (49%)
Query: 413 LIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFD 472
+I+TGS D++VR+WD + + H AV + F+ + +V+ S D +I VW
Sbjct: 256 VIITGSSDSTVRVWDVNAGEMLNTLIHHCEAVLHLRFNNGM---MVTCSKDRSIAVW--- 309
Query: 473 GLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTF 532
D P ++ + V+ H +N V +D + + S DRT VW V T
Sbjct: 310 ----DMASPTDITLRRVLVGHRAAVN--VVDFDDKYIVSASGDRTIKVWNTSTCEFVRTL 363
Query: 533 RGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQ 592
GHKRGI +++ D++V++ S D TI++W I G+CL+ EGH V F + +
Sbjct: 364 NGHKRGIACLQYR--DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNK--R 419
Query: 593 IVSCGADGLVKLWTVRT--------GE-CIATYDKHEDKIWALAVGKKTEMFATGGSDAL 643
IVS DG +K+W + G C+ T +H +++ L + ++ ++ D +
Sbjct: 420 IVSGAYDGKIKVWDLMAALDPRAPAGTLCLRTLVEHSGRVFRLQFDE-FQIVSSSHDDTI 478
Query: 644 VNLW 647
+ +W
Sbjct: 479 L-IW 481
Score = 208 (78.3 bits), Expect = 1.8e-13, P = 1.8e-13
Identities = 56/205 (27%), Positives = 100/205 (48%)
Query: 29 SDGSFIACACGESINIVDLSNAS---IKSTIEGGSDTITALALSPDDKLLFSSGHSREIR 85
++G + C+ SI + D+++ + ++ + G + + DDK + S+ R I+
Sbjct: 293 NNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIK 350
Query: 86 VWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGA-DRKVLVWDVDGGFCTHYFKGHK 144
VW+ ST + +R+ GH G+AC L +G+ D + +WD++ G C +GH+
Sbjct: 351 VWNTSTCEFVRTLNGHKR---GIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHE 407
Query: 145 GVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKK---------CVATLDKHFSRVTSMA 195
+V I F D + SG+ D ++VWDL+A C+ TL +H RV +
Sbjct: 408 ELVRCIRF----DNKRIVSGAYDGKIKVWDLMAALDPRAPAGTLCLRTLVEHSGRVFRLQ 463
Query: 196 ITSDGSTLISAGRDKVVNLWD-LRD 219
D ++S+ D + +WD L D
Sbjct: 464 F--DEFQIVSSSHDDTILIWDFLND 486
Score = 173 (66.0 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 74/284 (26%), Positives = 122/284 (42%)
Query: 248 LSSYNQQTIKKKRRS-LEIHFITVGERGIVRMWNADSACLYEQKSSDVTISF------EM 300
+S TIK +S LE I G G V D + SSD T+ EM
Sbjct: 218 VSGLRDNTIKIWDKSTLECKRILTGHTGSVLCLQYDERVIITG-SSDSTVRVWDVNAGEM 276
Query: 301 DDSKRGFTAATV-LPSNQGLLCVTADQQLLLYTTVEVPEKKMELILSKRLVGYNEEILDL 359
++ A + L N G++ + + + + P ++ L + LVG+ + +
Sbjct: 277 LNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAVWDMASPT---DITLRRVLVGHRAAVNVV 333
Query: 360 KFLGEEEQYLAVATNIEQVQVYDLSSMSCSYV--LAGHSEIVLCLDTCALSSGKILIVTG 417
F +++Y+ A+ ++V++ S+ C +V L GH + CL L+V+G
Sbjct: 334 DF---DDKYIVSASGDRTIKVWNTST--CEFVRTLNGHKRGIACLQY-----RDRLVVSG 383
Query: 418 SKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDD 477
S DN++RLWD E C+ V GH V + F K +VSG+ D IKVW D
Sbjct: 384 SSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKR---IVSGAYDGKIKVWDLMAALDP 440
Query: 478 AEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVW 521
L + +V G+ + L ++ + + S D T +W
Sbjct: 441 RAPAGTLCLRTLVEHSGR-VFRLQF--DEFQIVSSSHDDTILIW 481
Score = 162 (62.1 bits), Expect = 2.0e-08, P = 2.0e-08
Identities = 44/193 (22%), Positives = 84/193 (43%)
Query: 41 SINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKG 100
+I I D S K + G + ++ L L D++++ + +RVWD++ + L +
Sbjct: 225 TIKIWDKSTLECKRILTGHTGSV--LCLQYDERVIITGSSDSTVRVWDVNAGEMLNTLIH 282
Query: 101 HDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGF---CTHYFKGHKGVVSSILFHPDTD 157
H + + + G++ T DR + VWD+ GH+ V+ + D D
Sbjct: 283 HCEAVLHLRFN--NGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVV----DFD 336
Query: 158 KSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDL 217
+ S S D T++VW+ + V TL+ H + + ++S D + LWD+
Sbjct: 337 DKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYRD--RLVVSGSSDNTIRLWDI 394
Query: 218 RDYSCKLTVPTYE 230
+C + +E
Sbjct: 395 ECGACLRVLEGHE 407
Score = 147 (56.8 bits), Expect = 8.8e-07, P = 8.8e-07
Identities = 39/151 (25%), Positives = 69/151 (45%)
Query: 68 LSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVL 127
L DD+ + S I++WD STL+C R GH G + + ++ T +D V
Sbjct: 210 LQYDDQKIVSGLRDNTIKIWDKSTLECKRILTGHTGSVLCLQYDER--VIITGSSDSTVR 267
Query: 128 VWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKH 187
VWDV+ G + H V + F+ ++ + S D ++ VWD+ + + TL +
Sbjct: 268 VWDVNAGEMLNTLIHHCEAVLHLRFN----NGMMVTCSKDRSIAVWDMASPTDI-TLRRV 322
Query: 188 F--SRVTSMAITSDGSTLISAGRDKVVNLWD 216
R + D ++SA D+ + +W+
Sbjct: 323 LVGHRAAVNVVDFDDKYIVSASGDRTIKVWN 353
Score = 137 (53.3 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 35/150 (23%), Positives = 66/150 (44%)
Query: 505 NDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWS 564
+D + +G +D T +W L GH + +++ ++V+IT S D T+++W
Sbjct: 213 DDQKIVSGLRDNTIKIWDKSTLECKRILTGHTGSVLCLQYD--ERVIITGSSDSTVRVWD 270
Query: 565 ISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIA---TYDKHED 621
++ G L T H +VL F +V+C D + +W + + I H
Sbjct: 271 VNAGEMLNTLIHHCEAVLHLRF--NNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRA 328
Query: 622 KIWALAVGKKTEMFATGGSDALVNLWHDST 651
+ + K + A+G D + +W+ ST
Sbjct: 329 AVNVVDFDDKYIVSASG--DRTIKVWNTST 356
Score = 132 (51.5 bits), Expect = 3.8e-05, P = 3.8e-05
Identities = 35/134 (26%), Positives = 65/134 (48%)
Query: 365 EEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVR 424
++Q + ++++D S++ C +L GH+ VLCL + +I+TGS D++VR
Sbjct: 213 DDQKIVSGLRDNTIKIWDKSTLECKRILTGHTGSVLCLQY-----DERVIITGSSDSTVR 267
Query: 425 LWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNL 484
+WD + + H AV + F+ + +V+ S D +I VW D P ++
Sbjct: 268 VWDVNAGEMLNTLIHHCEAVLHLRFNNGM---MVTCSKDRSIAVW-------DMASPTDI 317
Query: 485 KAKAVVAAHGKDIN 498
+ V+ H +N
Sbjct: 318 TLRRVLVGHRAAVN 331
>MGI|MGI:1919039 [details] [associations]
symbol:Taf5l "TAF5-like RNA polymerase II,
p300/CBP-associated factor (PCAF)-associated factor" species:10090
"Mus musculus" [GO:0003713 "transcription coactivator activity"
evidence=ISO] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0030914 "STAGA complex" evidence=ISO] [GO:0033276
"transcription factor TFTC complex" evidence=ISO] [GO:0043966
"histone H3 acetylation" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1919039 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0003713
GO:GO:0043966 GO:GO:0004402 GO:GO:0030914 GO:GO:0033276
GeneTree:ENSGT00700000104377 CTD:27097 HOGENOM:HOG000212423
HOVERGEN:HBG050226 KO:K03130 OMA:YVDSEGP OrthoDB:EOG4NCMCF
EMBL:AK033477 EMBL:AK089463 EMBL:BC013550 IPI:IPI00128308
RefSeq:NP_598727.1 UniGene:Mm.291777 ProteinModelPortal:Q91WQ5
SMR:Q91WQ5 IntAct:Q91WQ5 STRING:Q91WQ5 PhosphoSite:Q91WQ5
PRIDE:Q91WQ5 Ensembl:ENSMUST00000093039 Ensembl:ENSMUST00000165628
GeneID:102162 KEGG:mmu:102162 UCSC:uc009nww.1 InParanoid:Q91WQ5
NextBio:355322 Bgee:Q91WQ5 Genevestigator:Q91WQ5
GermOnline:ENSMUSG00000038697 Uniprot:Q91WQ5
Length = 589
Score = 270 (100.1 bits), Expect = 3.9e-20, P = 3.9e-20
Identities = 70/246 (28%), Positives = 114/246 (46%)
Query: 391 VLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFS 450
+L GH V A SSG +++ S+D S+R WD S + GH V V S
Sbjct: 337 ILRGHCGPVYSTRFLADSSG---LLSCSEDMSIRYWDLGSFTNTVLYQGHAYPVWDVDIS 393
Query: 451 KKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVC 510
+ SGS D T ++WSFD P+ + A H D++ + PN + +
Sbjct: 394 P-FSLYFASGSHDRTARLWSFD-----RTYPLR-----IYAGHLADVDCVKFHPNSNYLA 442
Query: 511 TGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSC 570
TGS D+T +W SV F GH+ + S+ FSP + + +A D+ +K+W ++ G+
Sbjct: 443 TGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLSFSPNGKYLASAGEDQRLKLWDLASGTL 502
Query: 571 LKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGK 630
K GHT S+ +F I S D V++W +R+ C D ++ + G+
Sbjct: 503 FKELRGHTDSITSLAFSPDSGLIASASMDNSVRVWDIRSTCCNTPADGSSGELVGVYTGQ 562
Query: 631 KTEMFA 636
+ + +
Sbjct: 563 MSNVLS 568
Score = 240 (89.5 bits), Expect = 7.9e-17, P = 7.9e-17
Identities = 59/196 (30%), Positives = 91/196 (46%)
Query: 29 SDGS-FIACACGESINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSG-HSREIRV 86
+D S ++C+ SI DL + + +G + + + +SP L F+SG H R R+
Sbjct: 352 ADSSGLLSCSEDMSIRYWDLGSFTNTVLYQGHAYPVWDVDISPFS-LYFASGSHDRTARL 410
Query: 87 WDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGV 146
W LR + GH + HP+ LAT D+ V +W G F GH+G
Sbjct: 411 WSFDRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQQGNSVRLFTGHRGP 470
Query: 147 VSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISA 206
V S+ F P+ L S +D +++WDL + L H +TS+A + D + SA
Sbjct: 471 VLSLSFSPNG--KYLASAGEDQRLKLWDLASGTLFKELRGHTDSITSLAFSPDSGLIASA 528
Query: 207 GRDKVVNLWDLRDYSC 222
D V +WD+R C
Sbjct: 529 SMDNSVRVWDIRSTCC 544
Score = 234 (87.4 bits), Expect = 1.5e-16, Sum P(2) = 1.5e-16
Identities = 57/209 (27%), Positives = 90/209 (43%)
Query: 439 GHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDIN 498
GH G V + F L+S S D +I+ W ++ + H +
Sbjct: 340 GHCGPVYSTRFLADSSG-LLSCSEDMSIRYWDLGSFTNTV----------LYQGHAYPVW 388
Query: 499 SLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDK 558
+ ++P +GS DRTA +W + + GH + V+F P + T S DK
Sbjct: 389 DVDISPFSLYFASGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDK 448
Query: 559 TIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDK 618
T+++WS G+ ++ F GH VL SF G + S G D +KLW + +G
Sbjct: 449 TVRLWSAQQGNSVRLFTGHRGPVLSLSFSPNGKYLASAGEDQRLKLWDLASGTLFKELRG 508
Query: 619 HEDKIWALAVGKKTEMFATGGSDALVNLW 647
H D I +LA + + A+ D V +W
Sbjct: 509 HTDSITSLAFSPDSGLIASASMDNSVRVW 537
Score = 186 (70.5 bits), Expect = 6.4e-11, P = 6.4e-11
Identities = 36/123 (29%), Positives = 64/123 (52%)
Query: 63 ITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGA 122
+ + P+ L + + +R+W +R + GH GP + ++ P+G LA+AG
Sbjct: 429 VDCVKFHPNSNYLATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLSFSPNGKYLASAGE 488
Query: 123 DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVA 182
D+++ +WD+ G +GH ++S+ F PD+ L+ S S D +VRVWD+ + C
Sbjct: 489 DQRLKLWDLASGTLFKELRGHTDSITSLAFSPDS--GLIASASMDNSVRVWDIRSTCCNT 546
Query: 183 TLD 185
D
Sbjct: 547 PAD 549
Score = 179 (68.1 bits), Expect = 1.7e-10, Sum P(2) = 1.7e-10
Identities = 39/177 (22%), Positives = 76/177 (42%)
Query: 472 DGLSDDAEQPMNLKAKA-VVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVV 530
D L ++ + N + ++ H + S + S + + S+D + W L + V
Sbjct: 319 DTLEEEENEEDNTGTEMKILRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDLGSFTNTV 378
Query: 531 TFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRG 590
++GH +W V+ SP + S D+T ++WS L+ + GH + V F
Sbjct: 379 LYQGHAYPVWDVDISPFSLYFASGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNS 438
Query: 591 AQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLW 647
+ + D V+LW+ + G + + H + +L+ + A+ G D + LW
Sbjct: 439 NYLATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLSFSPNGKYLASAGEDQRLKLW 495
Score = 140 (54.3 bits), Expect = 6.5e-06, P = 6.5e-06
Identities = 32/112 (28%), Positives = 54/112 (48%)
Query: 37 ACGESINIVDLSNASIKSTIE---GGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLK 93
A G + V L +A +++ G + +L+ SP+ K L S+G + +++WDL++
Sbjct: 442 ATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLSFSPNGKYLASAGEDQRLKLWDLASGT 501
Query: 94 CLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKG 145
+ +GH +A P GL+A+A D V VWD+ C G G
Sbjct: 502 LFKELRGHTDSITSLAFSPDSGLIASASMDNSVRVWDIRSTCCNTPADGSSG 553
Score = 133 (51.9 bits), Expect = 4.5e-11, Sum P(2) = 4.5e-11
Identities = 38/113 (33%), Positives = 59/113 (52%)
Query: 346 SKRL-VGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDT 404
S RL G+ +L L F +YLA A ++++++DL+S + L GH++ + L
Sbjct: 460 SVRLFTGHRGPVLSLSF-SPNGKYLASAGEDQRLKLWDLASGTLFKELRGHTDSITSL-- 516
Query: 405 CALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFL 457
A S LI + S DNSVR+WD S CC G G + V ++ ++ N L
Sbjct: 517 -AFSPDSGLIASASMDNSVRVWDIRSTCCNTPADGSSGELVGV-YTGQMSNVL 567
Score = 126 (49.4 bits), Expect = 0.00021, P = 0.00021
Identities = 28/86 (32%), Positives = 48/86 (55%)
Query: 25 LVVSSDGSFIACACGES--INIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSR 82
L S +G ++A A GE + + DL++ ++ + G +D+IT+LA SPD L+ S+
Sbjct: 474 LSFSPNGKYLASA-GEDQRLKLWDLASGTLFKELRGHTDSITSLAFSPDSGLIASASMDN 532
Query: 83 EIRVWDLSTLKCLRSWKGHDGPAIGM 108
+RVWD+ + C G G +G+
Sbjct: 533 SVRVWDIRSTCCNTPADGSSGELVGV 558
Score = 104 (41.7 bits), Expect = 4.5e-11, Sum P(2) = 4.5e-11
Identities = 36/120 (30%), Positives = 51/120 (42%)
Query: 99 KGHDGPAIGMA-CHPSGGLLATAGADRKVLVWDVDGGFC-THYFKGHKGVVSSILFHPDT 156
+GH GP S GLL+ + D + WD+ G F T ++GH V + P
Sbjct: 339 RGHCGPVYSTRFLADSSGLLSCS-EDMSIRYWDL-GSFTNTVLYQGHAYPVWDVDISPF- 395
Query: 157 DKSLLF-SGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLW 215
SL F SGS D T R+W + H + V + + + L + DK V LW
Sbjct: 396 --SLYFASGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLW 453
Score = 50 (22.7 bits), Expect = 1.5e-16, Sum P(2) = 1.5e-16
Identities = 11/44 (25%), Positives = 21/44 (47%)
Query: 388 CSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESR 431
C Y ++ L+T +SS L+ G ++ ++LW S+
Sbjct: 260 CFYAFYNTEQL---LNTAEISSDSKLLAAGFDNSCIKLWSLRSK 300
>UNIPROTKB|C9JLV4 [details] [associations]
symbol:APAF1 "Apoptotic protease-activating factor 1"
species:9606 "Homo sapiens" [GO:0006952 "defense response"
evidence=IEA] [GO:0042981 "regulation of apoptotic process"
evidence=IEA] [GO:0043531 "ADP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005794 "Golgi apparatus"
evidence=IDA] InterPro:IPR017986 InterPro:IPR000767
InterPro:IPR001315 InterPro:IPR001680 InterPro:IPR002182
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00619 Pfam:PF00931
PRINTS:PR00364 PROSITE:PS50082 PROSITE:PS50209 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0005794 GO:GO:0006952
GO:GO:0042981 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043531
InterPro:IPR011047 SUPFAM:SSF50998 Gene3D:1.10.533.10
InterPro:IPR011029 SUPFAM:SSF47986 EMBL:AC011248
HOGENOM:HOG000290173 HGNC:HGNC:576 EMBL:AC013283 IPI:IPI00953387
SMR:C9JLV4 STRING:C9JLV4 Ensembl:ENST00000339433
Ensembl:ENST00000549007 Uniprot:C9JLV4
Length = 1163
Score = 223 (83.6 bits), Expect = 1.7e-14, P = 1.7e-14
Identities = 124/542 (22%), Positives = 216/542 (39%)
Query: 105 AIGMACHPSGGL-LATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFS 163
A+ AC G +A+ GAD+ + V+ + G K H+ V F TD + +
Sbjct: 617 AVYHACFSEDGQRIASCGADKTLQVFKAETGEKLLEIKAHEDEVLCCAF--STDDRFIAT 674
Query: 164 GSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISA--GRDKVVNLWDLRDYS 221
S D V++W+ + + V T D+H +V T+ L+ A D + LWDL
Sbjct: 675 CSVDKKVKIWNSMTGELVHTYDEHSEQVNCCHFTNSSHHLLLATGSSDCFLKLWDLNQKE 734
Query: 222 CKLTVPTYEMVEAVCAIPPGSAFDSFLSSYNQQ-TIK-------KKRRSLEIH--FITVG 271
C+ T+ + C P D L+S + T+K +R+S+ + F+ +
Sbjct: 735 CRNTMFGHTNSVNHCRFSPD---DKLLASCSADGTLKLWDATSANERKSINVKQFFLNLE 791
Query: 272 E-----RGIVRM--WNADSACLYEQKSSDVTISFEMDDSKRGFTAATVLPSNQGLLCVTA 324
+ IV+ W+AD A + + + + + D + L G++ +
Sbjct: 792 DPQEDMEVIVKCCSWSADGARIMVAAKNKIFL-WNTDSRSKVADCRGHLSWVHGVM-FSP 849
Query: 325 DQQLLLYTTVEVPEKKMEL--ILSKRLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYD 382
D L ++ + + E + V +E+ D+ F E LAV +I ++Q+ +
Sbjct: 850 DGSSFLTSSDDQTIRLWETKKVCKNSAVMLKQEV-DVVFQENEVMVLAV-DHIRRLQLIN 907
Query: 383 LSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMG 442
+ Y+ V C C LS I G ++ ++ + + + H
Sbjct: 908 GRTGQIDYLTEAQ---VSC---CCLSPHLQYIAFGDENGAIEILELVNNRIFQSRFQHKK 961
Query: 443 AVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAV 502
V + F+ + L+S S D I+VW++ L + H + + +
Sbjct: 962 TVWHIQFTAD-EKTLISSSDDAEIQVWNWQ-----------LDKCIFLRGHQETVKDFRL 1009
Query: 503 APNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKI 562
N L+ + S D T VW + F H+ + S + S + S DKT KI
Sbjct: 1010 LKNSRLL-SWSFDGTVKVWNIITGNKEKDFVCHQGTVLSCDISHDATKFSSTSADKTAKI 1068
Query: 563 WSISDGSCLK-----TFEG---HTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIA 614
W++S+G L + EG H V F G ++S G G +K W V TGE
Sbjct: 1069 WNVSNGELLHLCAPLSEEGAATHGGWVTDLCFSPDGKMLISAG--GYIKWWNVVTGESSQ 1126
Query: 615 TY 616
T+
Sbjct: 1127 TF 1128
Score = 188 (71.2 bits), Expect = 4.5e-20, Sum P(2) = 4.5e-20
Identities = 53/207 (25%), Positives = 87/207 (42%)
Query: 12 CEPVLQQFYGGGPLVVSS--DGSFIACACGESINIVDLSNASIKSTIEGGSDTITALALS 69
CEP + Y L D + E IN +++N S + + +D + S
Sbjct: 569 CEPETSEVYQQAKLQAKQEVDNGMLYL---EWINKKNITNLS-RLVVRPHTDAVYHACFS 624
Query: 70 PDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVW 129
D + + S G + ++V+ T + L K H+ + A +AT D+KV +W
Sbjct: 625 EDGQRIASCGADKTLQVFKAETGEKLLEIKAHEDEVLCCAFSTDDRFIATCSVDKKVKIW 684
Query: 130 DVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFS 189
+ G H + H V+ F + LL +GS D +++WDL K+C T+ H +
Sbjct: 685 NSMTGELVHTYDEHSEQVNCCHFTNSSHHLLLATGSSDCFLKLWDLNQKECRNTMFGHTN 744
Query: 190 RVTSMAITSDGSTLISAGRDKVVNLWD 216
V + D L S D + LWD
Sbjct: 745 SVNHCRFSPDDKLLASCSADGTLKLWD 771
Score = 168 (64.2 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 36/123 (29%), Positives = 58/123 (47%)
Query: 527 VSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASF 586
+S + R H ++ FS Q + + DKT++++ G L + H VL +F
Sbjct: 606 LSRLVVRPHTDAVYHACFSEDGQRIASCGADKTLQVFKAETGEKLLEIKAHEDEVLCCAF 665
Query: 587 LTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTE--MFATGGSDALV 644
T I +C D VK+W TGE + TYD+H +++ + + ATG SD +
Sbjct: 666 STDDRFIATCSVDKKVKIWNSMTGELVHTYDEHSEQVNCCHFTNSSHHLLLATGSSDCFL 725
Query: 645 NLW 647
LW
Sbjct: 726 KLW 728
Score = 156 (60.0 bits), Expect = 3.0e-07, P = 3.0e-07
Identities = 45/168 (26%), Positives = 76/168 (45%)
Query: 440 HMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINS 499
H AV FS+ Q + S +D T++V+ ++ E+ + +KA H ++
Sbjct: 614 HTDAVYHACFSEDGQR-IASCGADKTLQVFK----AETGEKLLEIKA------HEDEVLC 662
Query: 500 LAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASG--D 557
A + +D + T S D+ +W V T+ H + F+ ++ A+G D
Sbjct: 663 CAFSTDDRFIATCSVDKKVKIWNSMTGELVHTYDEHSEQVNCCHFTNSSHHLLLATGSSD 722
Query: 558 KTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLW 605
+K+W ++ C T GHT+SV F + SC ADG +KLW
Sbjct: 723 CFLKLWDLNQKECRNTMFGHTNSVNHCRFSPDDKLLASCSADGTLKLW 770
Score = 141 (54.7 bits), Expect = 4.5e-20, Sum P(2) = 4.5e-20
Identities = 27/116 (23%), Positives = 60/116 (51%)
Query: 535 HKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIV 594
HK+ +W ++F+ ++ +I++S D I++W+ C+ GH +V + L + ++++
Sbjct: 959 HKKTVWHIQFTADEKTLISSSDDAEIQVWNWQLDKCI-FLRGHQETV-KDFRLLKNSRLL 1016
Query: 595 SCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLWHDS 650
S DG VK+W + TG + H+ + + + F++ +D +W+ S
Sbjct: 1017 SWSFDGTVKVWNIITGNKEKDFVCHQGTVLSCDISHDATKFSSTSADKTAKIWNVS 1072
Score = 137 (53.3 bits), Expect = 3.3e-05, P = 3.3e-05
Identities = 50/175 (28%), Positives = 76/175 (43%)
Query: 41 SINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKG 100
+I I++L N I + T+ + + D+K L SS EI+VW+ KC+ +G
Sbjct: 941 AIEILELVNNRIFQSRFQHKKTVWHIQFTADEKTLISSSDDAEIQVWNWQLDKCI-FLRG 999
Query: 101 HDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSL 160
H + LL+ + D V VW++ G F H+G V S D K
Sbjct: 1000 HQETVKDFRLLKNSRLLSWS-FDGTVKVWNIITGNKEKDFVCHQGTVLSCDISHDATK-- 1056
Query: 161 LFSGSDDATVRVWDL----LAKKCVATLDK----HFSRVTSMAITSDGSTLISAG 207
S S D T ++W++ L C ++ H VT + + DG LISAG
Sbjct: 1057 FSSTSADKTAKIWNVSNGELLHLCAPLSEEGAATHGGWVTDLCFSPDGKMLISAG 1111
Score = 131 (51.2 bits), Expect = 5.6e-14, Sum P(2) = 5.6e-14
Identities = 41/151 (27%), Positives = 66/151 (43%)
Query: 42 INIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWK-- 99
+ + DL+ ++T+ G ++++ SPDDKLL S +++WD ++ +S
Sbjct: 725 LKLWDLNQKECRNTMFGHTNSVNHCRFSPDDKLLASCSADGTLKLWDATSANERKSINVK 784
Query: 100 ---------GHDGPAIGMACHPSG-GLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSS 149
D I C S G A K+ +W+ D +GH V
Sbjct: 785 QFFLNLEDPQEDMEVIVKCCSWSADGARIMVAAKNKIFLWNTDSRSKVADCRGHLSWVHG 844
Query: 150 ILFHPDTDKSLLFSGSDDATVRVWDLLAKKC 180
++F PD S L S SDD T+R+W+ K C
Sbjct: 845 VMFSPD-GSSFLTS-SDDQTIRLWET-KKVC 872
Score = 98 (39.6 bits), Expect = 1.3e-15, Sum P(2) = 1.3e-15
Identities = 52/231 (22%), Positives = 93/231 (40%)
Query: 421 NSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQ 480
N + LW+++SR V GH+ V V FS +FL S S D TI++W + ++
Sbjct: 819 NKIFLWNTDSRSKVADCRGHLSWVHGVMFSPDGSSFLTS-SDDQTIRLWETKKVCKNSA- 876
Query: 481 PMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDL-VSVVTFRGHKRGI 539
+ LK + V ++ LAV L RT + L + VS H + I
Sbjct: 877 -VMLKQEVDVVFQENEVMVLAVDHIRRLQLING--RTGQIDYLTEAQVSCCCLSPHLQYI 933
Query: 540 WSVEFSPVDQVVITASGDKT--IKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCG 597
A GD+ I+I + + ++ H +V F ++S
Sbjct: 934 --------------AFGDENGAIEILELVNNRIFQSRFQHKKTVWHIQFTADEKTLISSS 979
Query: 598 ADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLWH 648
D +++W + +CI H++ + + K + + + D V +W+
Sbjct: 980 DDAEIQVWNWQLDKCIFLRG-HQETVKDFRLLKNSRLLSWS-FDGTVKVWN 1028
Score = 90 (36.7 bits), Expect = 9.0e-15, Sum P(2) = 9.0e-15
Identities = 52/212 (24%), Positives = 82/212 (38%)
Query: 445 GAVAFSKKLQNFLVSGSSDHTIKVWSFD---------GLSDDAE-QPMNLKA-KAV-VAA 492
GA+ + + N + H VW SDDAE Q N + K + +
Sbjct: 940 GAIEILELVNNRIFQSRFQHKKTVWHIQFTADEKTLISSSDDAEIQVWNWQLDKCIFLRG 999
Query: 493 HGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVI 552
H + + + N L+ + S D T VW + F H+ + S + S
Sbjct: 1000 HQETVKDFRLLKNSRLL-SWSFDGTVKVWNIITGNKEKDFVCHQGTVLSCDISHDATKFS 1058
Query: 553 TASGDKTIKIWSISDGSCLKTFEGHTSSVL-RASFLTRGAQIVS-C-GADGLVKLWTVRT 609
+ S DKT KIW++S+G L H + L T G + C DG K+ +
Sbjct: 1059 STSADKTAKIWNVSNGELL-----HLCAPLSEEGAATHGGWVTDLCFSPDG--KM-LISA 1110
Query: 610 GECIATYDKHEDKIWALAVGKKTEMFATGGSD 641
G I K W + G+ ++ F T G++
Sbjct: 1111 GGYI--------KWWNVVTGESSQTFYTNGTN 1134
Score = 49 (22.3 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 15/64 (23%), Positives = 25/64 (39%)
Query: 187 HFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYEMVEAVCAIPPGSAFDS 246
H V + DG + S G DK + ++ L + +E CA S D
Sbjct: 614 HTDAVYHACFSEDGQRIASCGADKTLQVFKAETGEKLLEIKAHEDEVLCCAF---STDDR 670
Query: 247 FLSS 250
F+++
Sbjct: 671 FIAT 674
>ZFIN|ZDB-GENE-000616-4 [details] [associations]
symbol:apaf1 "apoptotic protease activating factor 1"
species:7955 "Danio rerio" [GO:0042981 "regulation of apoptotic
process" evidence=IEA] [GO:0006952 "defense response" evidence=IEA]
[GO:0043531 "ADP binding" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0008233
"peptidase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0006915 "apoptotic process"
evidence=IEA] InterPro:IPR017986 InterPro:IPR000767
InterPro:IPR001315 InterPro:IPR001680 InterPro:IPR002182
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00619 Pfam:PF00931
PRINTS:PR00364 PROSITE:PS50082 PROSITE:PS50209 PROSITE:PS50294
SMART:SM00114 SMART:SM00320 ZFIN:ZDB-GENE-000616-4 GO:GO:0006952
GO:GO:0042981 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043531
GO:GO:0005622 Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986
InterPro:IPR017251 PIRSF:PIRSF037646 GeneTree:ENSGT00700000104017
EMBL:CT868708 EMBL:CT025647 IPI:IPI00996819
Ensembl:ENSDART00000127261 Uniprot:E7F2V1
Length = 1264
Score = 275 (101.9 bits), Expect = 4.5e-20, P = 4.5e-20
Identities = 150/631 (23%), Positives = 271/631 (42%)
Query: 28 SSDGSFIA-CACGESINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRV 86
S DGS IA C +++ + ++ ++ + + A SPDD+ + + +++++
Sbjct: 627 SKDGSKIASCGASKALRVFKSTSGEKLLELQAHEEDVLCCAFSPDDRHIATCASDKKVKL 686
Query: 87 WDLSTLKCLRSWKGHDGPAIGMACHPSGG---LLATAGADR--KVLVWDVDGGFCTHYFK 141
W++ +R ++ I + G LLAT D+ +W+ + +
Sbjct: 687 WNVERGVLIREFEVEHEEQINHCQFTNTGRRVLLATCSNDKFTNTKLWNPNKKTSQNTMF 746
Query: 142 GHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAK---KCVATLDKHF----SRVTSM 194
GH V+ F P+ D L S SD +++++++ + K + +D F + +M
Sbjct: 747 GHMEPVNHCCFSPN-DLYLATSSSD-GSLKLFEVSSANEWKSI-DVDSFFPESDEEIKAM 803
Query: 195 AITS----DGSTLISAGRDKVVNLWDLRDYSCKLTVPTYEM--VEAVCAIPPGSAFDSFL 248
S DGS +I A R+ V ++D+ L + T + ++ A P S L
Sbjct: 804 VKCSTWSADGSQIICAARNTVF-VFDVETSDLLLELKTSRLSTIQFCHACPNSSLLAVAL 862
Query: 249 SSYNQQT----IKKKRRSLEIHFITVGERGIVRMWNADSACLYEQKSSDVTISFEMDDSK 304
S Y + KK+ H V V+ ++ D + L S D TI + ++
Sbjct: 863 SHYTVELWNFESSKKKAECSGHLSWVH---CVQ-FSPDGSLLLSS-SDDQTI--RLWETD 915
Query: 305 RGFTAATV-LPSNQGLLCVTADQQLLLYTTVEVPEKKMEL-ILSKR---LVGYNEEI--- 356
R T++ V L + +L +D T+ P+ L +LS +V +EE+
Sbjct: 916 RVHTSSAVALKRDTDVLFSHSD------ATIIAPDSSNRLQVLSGSTGAVVLESEELSSR 969
Query: 357 LDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVT 416
+ + ++A+ + VQV ++ S S L+GH++ V C + +++T
Sbjct: 970 IRCSCISRNAAFVALGSEDGTVQVIEVPSSKASVKLSGHTKTV---HHCQFTDDCEILIT 1026
Query: 417 GSKDNSVRL-WDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLS 475
S+D+++R+ W + C+ V GHM V +K L+S SS + WSFDG
Sbjct: 1027 SSEDSTIRVVWKWRTGECM-VLQGHMEPV------RKFH--LLSSSSSPRLFSWSFDGTV 1077
Query: 476 DDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTAC-VWRLPDLVSVVTFRG 534
+ + +V G + S V+ + L T S +RTA VW + G
Sbjct: 1078 KVWDLTRGQMLQDLVCHEGA-VLSCDVSSDGRLFATTSANRTAKKVWSSASWKMIFLLEG 1136
Query: 535 HKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLK-----TFEG----HTSSVLRAS 585
HK + S FS ++ + T + I++WS+ DG+ LK T + H V
Sbjct: 1137 HKDCVRSCRFSWDNKRLATGDDNGEIRLWSMLDGALLKICSRDTKDSMDSYHGGWVTDLH 1196
Query: 586 FLTRGAQIVSCGADGLVKLWTVRTGECIATY 616
F +VS G G +K W+V +GE + T+
Sbjct: 1197 FSPDNRVLVSTG--GYIKWWSVESGEALQTF 1225
Score = 194 (73.4 bits), Expect = 2.6e-11, P = 2.6e-11
Identities = 74/290 (25%), Positives = 129/290 (44%)
Query: 369 LAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDS 428
LAVA + V++++ S +GH V C+ S L+++ S D ++RLW++
Sbjct: 858 LAVALSHYTVELWNFESSKKKAECSGHLSWVHCVQ---FSPDGSLLLSSSDDQTIRLWET 914
Query: 429 ESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKA 488
+ V T AVA K+ + L S SD TI S + Q ++ A
Sbjct: 915 DR-----VHTS-----SAVAL-KRDTDVLFS-HSDATIIAPD----SSNRLQVLSGSTGA 958
Query: 489 VVAAH---GKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFS 545
VV I ++ N + V GS+D T V +P + V GH + + +F+
Sbjct: 959 VVLESEELSSRIRCSCISRNAAFVALGSEDGTVQVIEVPSSKASVKLSGHTKTVHHCQFT 1018
Query: 546 PVDQVVITASGDKTIKI-WSISDGSCLKTFEGHTSSVLRASFLTRGA--QIVSCGADGLV 602
+++IT+S D TI++ W G C+ +GH V + L+ + ++ S DG V
Sbjct: 1019 DDCEILITSSEDSTIRVVWKWRTGECM-VLQGHMEPVRKFHLLSSSSSPRLFSWSFDGTV 1077
Query: 603 KLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVN-LWHDST 651
K+W + G+ + HE + + V +FAT ++ +W ++
Sbjct: 1078 KVWDLTRGQMLQDLVCHEGAVLSCDVSSDGRLFATTSANRTAKKVWSSAS 1127
Score = 165 (63.1 bits), Expect = 3.5e-08, P = 3.5e-08
Identities = 116/574 (20%), Positives = 228/574 (39%)
Query: 101 HDGPAIGMACHPS-GGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKS 159
H G A+ AC G +A+ GA + + V+ G + H+ V F PD D+
Sbjct: 617 HQG-AVYYACFSKDGSKIASCGASKALRVFKSTSGEKLLELQAHEEDVLCCAFSPD-DRH 674
Query: 160 LLFSGSDDATVRVWDLLAKKCVATLD-KHFSRVTSMAITSDGSTLISA--GRDKVVN--L 214
+ SD V++W++ + + +H ++ T+ G ++ A DK N L
Sbjct: 675 IATCASDKK-VKLWNVERGVLIREFEVEHEEQINHCQFTNTGRRVLLATCSNDKFTNTKL 733
Query: 215 WDLRDYSCKLTVPTY-EMVEAVCAIPPG-----SAFDSFLSSYNQQTIKKKRRSLEIH-F 267
W+ + + T+ + E V C P S+ D L + + + + S+++ F
Sbjct: 734 WNPNKKTSQNTMFGHMEPVNHCCFSPNDLYLATSSSDGSLKLFEVSSANEWK-SIDVDSF 792
Query: 268 ITVGERGIVRM-----WNADSACLYEQKSSDVTISFEMDDSKRGFTAATVLPSNQGLLCV 322
+ I M W+AD + + + V + F+++ S T S
Sbjct: 793 FPESDEEIKAMVKCSTWSADGSQIICAARNTVFV-FDVETSDLLLELKTSRLSTIQFCHA 851
Query: 323 TADQQLLLYTTVEVPEKKMELILSKRLV---GYNEEILDLKFLGEEEQYLAVATNIEQVQ 379
+ LL + SK+ G+ + ++F + L +++ + ++
Sbjct: 852 CPNSSLLAVALSHYTVELWNFESSKKKAECSGHLSWVHCVQF-SPDGSLLLSSSDDQTIR 910
Query: 380 VYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTG 439
+++ + S S + L DT L S D ++ DS +R + V +G
Sbjct: 911 LWETDRVHTS------SAVALKRDTDVLFS--------HSDATIIAPDSSNR--LQVLSG 954
Query: 440 HMGAV--GAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDI 497
GAV + S +++ +S ++ + + S DG E P + KA ++ H K +
Sbjct: 955 STGAVVLESEELSSRIRCSCISRNAAF-VALGSEDGTVQVIEVPSS-KASVKLSGHTKTV 1012
Query: 498 NSLAVAPNDSLVCTGSQDRTA-CVWRLPDLVSVVTFRGHKRGIWSVEF--SPVDQVVITA 554
+ + ++ T S+D T VW+ +V +GH + S + +
Sbjct: 1013 HHCQFTDDCEILITSSEDSTIRVVWKWRTGECMV-LQGHMEPVRKFHLLSSSSSPRLFSW 1071
Query: 555 SGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVK-LWTVRTGECI 613
S D T+K+W ++ G L+ H +VL + G + A+ K +W+ + + I
Sbjct: 1072 SFDGTVKVWDLTRGQMLQDLVCHEGAVLSCDVSSDGRLFATTSANRTAKKVWSSASWKMI 1131
Query: 614 ATYDKHEDKIWALAVGKKTEMFATGGSDALVNLW 647
+ H+D + + + ATG + + LW
Sbjct: 1132 FLLEGHKDCVRSCRFSWDNKRLATGDDNGEIRLW 1165
>SGD|S000000402 [details] [associations]
symbol:TAF5 "Subunit (90 kDa) of TFIID and SAGA complexes"
species:4932 "Saccharomyces cerevisiae" [GO:0051123 "RNA polymerase
II transcriptional preinitiation complex assembly" evidence=IC]
[GO:0005669 "transcription factor TFIID complex" evidence=IDA]
[GO:0032947 "protein complex scaffold" evidence=IMP] [GO:0000124
"SAGA complex" evidence=IDA] [GO:0006366 "transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0003682 "chromatin
binding" evidence=IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043130 "ubiquitin binding"
evidence=IDA] [GO:0016568 "chromatin modification" evidence=IDA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0016573 "histone
acetylation" evidence=IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0046695 "SLIK (SAGA-like) complex"
evidence=IDA] [GO:0001075 "RNA polymerase II core promoter
sequence-specific DNA binding transcription factor activity
involved in preinitiation complex assembly" evidence=IC]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320
SMART:SM00667 SGD:S000000402 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016573 GO:GO:0003682
EMBL:BK006936 GO:GO:0000124 GO:GO:0046695 InterPro:IPR013720
Pfam:PF08513 EMBL:Z21487 GO:GO:0032947 GO:GO:0043130 GO:GO:0005669
GO:GO:0051123 GeneTree:ENSGT00700000104377 KO:K03130
HOGENOM:HOG000212424 OrthoDB:EOG4S1XG9 EMBL:Z36067 EMBL:AY692890
PIR:S34023 RefSeq:NP_009757.1 PDB:2J49 PDBsum:2J49
ProteinModelPortal:P38129 SMR:P38129 DIP:DIP-740N IntAct:P38129
MINT:MINT-475651 STRING:P38129 PaxDb:P38129 PeptideAtlas:P38129
EnsemblFungi:YBR198C GeneID:852497 KEGG:sce:YBR198C CYGD:YBR198c
OMA:PNINYLA EvolutionaryTrace:P38129 NextBio:971495
Genevestigator:P38129 GermOnline:YBR198C Uniprot:P38129
Length = 798
Score = 272 (100.8 bits), Expect = 4.6e-20, P = 4.6e-20
Identities = 81/308 (26%), Positives = 142/308 (46%)
Query: 357 LDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLD---TCALSSG--- 410
LDLK ++ + A ++ +Q+ L S+ C Y ++ + CLD C +++
Sbjct: 429 LDLKLEIQKVKESRDAIKLDNLQLA-LPSV-CMYTFQNTNKDMSCLDFSDDCRIAAAGFQ 486
Query: 411 ----KILIVTGSKDNSVRLW------DSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSG 460
KI + GS N+ + D + C VG H G V + +FS +L+SG
Sbjct: 487 DSYIKIWSLDGSSLNNPNIALNNNDKDEDPTCKTLVG--HSGTVYSTSFSPD-NKYLLSG 543
Query: 461 SSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACV 520
S D T+++WS D + A H + ++ +P T S D+TA +
Sbjct: 544 SEDKTVRLWSMDTHT----------ALVSYKGHNHPVWDVSFSPLGHYFATASHDQTARL 593
Query: 521 WRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSS 580
W + + F GH + V F P V T S DKT ++W +S G ++ F GHT+
Sbjct: 594 WSCDHIYPLRIFAGHLNDVDCVSFHPNGCYVFTGSSDKTCRMWDVSTGDSVRLFLGHTAP 653
Query: 581 VLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKH-EDKIWALAVGKKTEMFATGG 639
V+ + G + + DG++ +W + TG+ + H ++ I++L+ K+ + +GG
Sbjct: 654 VISIAVCPDGRWLSTGSEDGIINVWDIGTGKRLKQMRGHGKNAIYSLSYSKEGNVLISGG 713
Query: 640 SDALVNLW 647
+D V +W
Sbjct: 714 ADHTVRVW 721
Score = 272 (100.8 bits), Expect = 4.2e-19, Sum P(2) = 4.2e-19
Identities = 56/200 (28%), Positives = 100/200 (50%)
Query: 459 SGSSDHTIKVWSFDGLS-DDAEQPMNLKAK------AVVAAHGKDINSLAVAPNDSLVCT 511
+G D IK+WS DG S ++ +N K + H + S + +P++ + +
Sbjct: 483 AGFQDSYIKIWSLDGSSLNNPNIALNNNDKDEDPTCKTLVGHSGTVYSTSFSPDNKYLLS 542
Query: 512 GSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCL 571
GS+D+T +W + ++V+++GH +W V FSP+ TAS D+T ++WS L
Sbjct: 543 GSEDKTVRLWSMDTHTALVSYKGHNHPVWDVSFSPLGHYFATASHDQTARLWSCDHIYPL 602
Query: 572 KTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKK 631
+ F GH + V SF G + + +D ++W V TG+ + + H + ++AV
Sbjct: 603 RIFAGHLNDVDCVSFHPNGCYVFTGSSDKTCRMWDVSTGDSVRLFLGHTAPVISIAVCPD 662
Query: 632 TEMFATGGSDALVNLWHDST 651
+TG D ++N+W T
Sbjct: 663 GRWLSTGSEDGIINVWDIGT 682
Score = 264 (98.0 bits), Expect = 3.4e-19, P = 3.4e-19
Identities = 54/163 (33%), Positives = 84/163 (51%)
Query: 55 TIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPSG 114
T+ G S T+ + + SPD+K L S + +R+W + T L S+KGH+ P ++ P G
Sbjct: 520 TLVGHSGTVYSTSFSPDNKYLLSGSEDKTVRLWSMDTHTALVSYKGHNHPVWDVSFSPLG 579
Query: 115 GLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWD 174
ATA D+ +W D + F GH V + FHP+ +F+GS D T R+WD
Sbjct: 580 HYFATASHDQTARLWSCDHIYPLRIFAGHLNDVDCVSFHPNG--CYVFTGSSDKTCRMWD 637
Query: 175 LLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDL 217
+ V H + V S+A+ DG L + D ++N+WD+
Sbjct: 638 VSTGDSVRLFLGHTAPVISIAVCPDGRWLSTGSEDGIINVWDI 680
Score = 250 (93.1 bits), Expect = 1.1e-16, Sum P(2) = 1.1e-16
Identities = 68/223 (30%), Positives = 107/223 (47%)
Query: 387 SCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGA 446
+C L GHS V T K L+ +GS+D +VRLW ++ + GH V
Sbjct: 517 TCK-TLVGHSGTVY--STSFSPDNKYLL-SGSEDKTVRLWSMDTHTALVSYKGHNHPVWD 572
Query: 447 VAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPND 506
V+FS L ++ + S D T ++WS D + P+ + A H D++ ++ PN
Sbjct: 573 VSFSP-LGHYFATASHDQTARLWSCDHI-----YPLR-----IFAGHLNDVDCVSFHPNG 621
Query: 507 SLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSIS 566
V TGS D+T +W + SV F GH + S+ P + + T S D I +W I
Sbjct: 622 CYVFTGSSDKTCRMWDVSTGDSVRLFLGHTAPVISIAVCPDGRWLSTGSEDGIINVWDIG 681
Query: 567 DGSCLKTFEGH-TSSVLRASFLTRGAQIVSCGADGLVKLWTVR 608
G LK GH +++ S+ G ++S GAD V++W ++
Sbjct: 682 TGKRLKQMRGHGKNAIYSLSYSKEGNVLISGGADHTVRVWDLK 724
Score = 205 (77.2 bits), Expect = 9.0e-13, P = 9.0e-13
Identities = 49/193 (25%), Positives = 90/193 (46%)
Query: 28 SSDGSFIACACGE-SINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRV 86
S D ++ + ++ + + + + +G + + ++ SP ++ H + R+
Sbjct: 534 SPDNKYLLSGSEDKTVRLWSMDTHTALVSYKGHNHPVWDVSFSPLGHYFATASHDQTARL 593
Query: 87 WDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGV 146
W + LR + GH ++ HP+G + T +D+ +WDV G F GH
Sbjct: 594 WSCDHIYPLRIFAGHLNDVDCVSFHPNGCYVFTGSSDKTCRMWDVSTGDSVRLFLGHTAP 653
Query: 147 VSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSR-VTSMAITSDGSTLIS 205
V SI PD L +GS+D + VWD+ K + + H + S++ + +G+ LIS
Sbjct: 654 VISIAVCPDG--RWLSTGSEDGIINVWDIGTGKRLKQMRGHGKNAIYSLSYSKEGNVLIS 711
Query: 206 AGRDKVVNLWDLR 218
G D V +WDL+
Sbjct: 712 GGADHTVRVWDLK 724
Score = 186 (70.5 bits), Expect = 1.0e-09, Sum P(2) = 1.0e-09
Identities = 54/220 (24%), Positives = 100/220 (45%)
Query: 347 KRLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCA 406
K LVG++ + F + +YL + + V+++ + + + GH+ V +
Sbjct: 519 KTLVGHSGTVYSTSF-SPDNKYLLSGSEDKTVRLWSMDTHTALVSYKGHNHPVWDVSFSP 577
Query: 407 LSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTI 466
L T S D + RLW + + + GH+ V V+F ++ +GSSD T
Sbjct: 578 LGH---YFATASHDQTARLWSCDHIYPLRIFAGHLNDVDCVSFHPN-GCYVFTGSSDKTC 633
Query: 467 KVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDL 526
++W D + D+ + + H + S+AV P+ + TGS+D VW +
Sbjct: 634 RMW--DVSTGDSVR--------LFLGHTAPVISIAVCPDGRWLSTGSEDGIINVWDIGTG 683
Query: 527 VSVVTFRGH-KRGIWSVEFSPVDQVVITASGDKTIKIWSI 565
+ RGH K I+S+ +S V+I+ D T+++W +
Sbjct: 684 KRLKQMRGHGKNAIYSLSYSKEGNVLISGGADHTVRVWDL 723
Score = 39 (18.8 bits), Expect = 4.2e-19, Sum P(2) = 4.2e-19
Identities = 9/40 (22%), Positives = 19/40 (47%)
Query: 136 CTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDL 175
C + F+ +S + F D + +G D+ +++W L
Sbjct: 458 CMYTFQNTNKDMSCLDFSDDC--RIAAAGFQDSYIKIWSL 495
>UNIPROTKB|F1NYG1 [details] [associations]
symbol:BTRC "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0000209 "protein polyubiquitination" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0006470
"protein dephosphorylation" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0008013 "beta-catenin binding" evidence=IEA] [GO:0019005 "SCF
ubiquitin ligase complex" evidence=IEA] [GO:0031648 "protein
destabilization" evidence=IEA] [GO:0033598 "mammary gland
epithelial cell proliferation" evidence=IEA] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IEA] [GO:0043122
"regulation of I-kappaB kinase/NF-kappaB cascade" evidence=IEA]
[GO:0045309 "protein phosphorylated amino acid binding"
evidence=IEA] [GO:0045862 "positive regulation of proteolysis"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0051726 "regulation
of cell cycle" evidence=IEA] [GO:0060444 "branching involved in
mammary gland duct morphogenesis" evidence=IEA] [GO:0061136
"regulation of proteasomal protein catabolic process" evidence=IEA]
[GO:0071407 "cellular response to organic cyclic compound"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
GO:GO:0045892 GO:GO:0045893 GO:GO:0006470 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0051726
GO:GO:0006511 GO:GO:0019005 GO:GO:0045862 GO:GO:0000209
GO:GO:0071407 GO:GO:0061136 GO:GO:0031648 GO:GO:0043122
GO:GO:0042753 OMA:NAYLKPM GeneTree:ENSGT00690000101849
EMBL:AADN02046404 IPI:IPI00684527 Ensembl:ENSGALT00000033197
Uniprot:F1NYG1
Length = 605
Score = 269 (99.8 bits), Expect = 5.4e-20, P = 5.4e-20
Identities = 61/221 (27%), Positives = 116/221 (52%)
Query: 414 IVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDG 473
IV+G +DN++++WD + C + TGH G+V + + +++ +++GSSD T++VW +
Sbjct: 316 IVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQYDERV---IITGSSDSTVRVWDVN- 371
Query: 474 LSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFR 533
A + +N + H + + L N+ ++ T S+DR+ VW + + R
Sbjct: 372 ----AGEMLN-----TLIHHCEAVLHLRF--NNGMMVTCSKDRSIAVWDMASPTDITLRR 420
Query: 534 ---GHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRG 590
GH+ + V+F D+ +++ASGD+TIK+W+ S ++T GH + A R
Sbjct: 421 VLVGHRAAVNVVDFD--DKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGI--ACLQYRD 476
Query: 591 AQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKK 631
+VS +D ++LW + G C+ + HE+ + + K
Sbjct: 477 RLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNK 517
Score = 251 (93.4 bits), Expect = 5.2e-18, P = 5.2e-18
Identities = 70/244 (28%), Positives = 120/244 (49%)
Query: 413 LIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFD 472
+I+TGS D++VR+WD + + H AV + F+ + +V+ S D +I VW
Sbjct: 355 VIITGSSDSTVRVWDVNAGEMLNTLIHHCEAVLHLRFNNGM---MVTCSKDRSIAVW--- 408
Query: 473 GLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTF 532
D P ++ + V+ H +N V +D + + S DRT VW V T
Sbjct: 409 ----DMASPTDITLRRVLVGHRAAVN--VVDFDDKYIVSASGDRTIKVWNTSTCEFVRTL 462
Query: 533 RGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQ 592
GHKRGI +++ D++V++ S D TI++W I G+CL+ EGH V F + +
Sbjct: 463 NGHKRGIACLQYR--DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNK--R 518
Query: 593 IVSCGADGLVKLWTV--------RTGE-CIATYDKHEDKIWALAVGKKTEMFATGGSDAL 643
IVS DG +K+W + G C+ T +H +++ L + ++ ++ D +
Sbjct: 519 IVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQFDE-FQIVSSSHDDTI 577
Query: 644 VNLW 647
+ +W
Sbjct: 578 L-IW 580
Score = 207 (77.9 bits), Expect = 3.4e-13, P = 3.4e-13
Identities = 56/205 (27%), Positives = 100/205 (48%)
Query: 29 SDGSFIACACGESINIVDLSNAS---IKSTIEGGSDTITALALSPDDKLLFSSGHSREIR 85
++G + C+ SI + D+++ + ++ + G + + DDK + S+ R I+
Sbjct: 392 NNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIK 449
Query: 86 VWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGA-DRKVLVWDVDGGFCTHYFKGHK 144
VW+ ST + +R+ GH G+AC L +G+ D + +WD++ G C +GH+
Sbjct: 450 VWNTSTCEFVRTLNGHKR---GIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHE 506
Query: 145 GVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKK---------CVATLDKHFSRVTSMA 195
+V I F D + SG+ D ++VWDL+A C+ TL +H RV +
Sbjct: 507 ELVRCIRF----DNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQ 562
Query: 196 ITSDGSTLISAGRDKVVNLWD-LRD 219
D ++S+ D + +WD L D
Sbjct: 563 F--DEFQIVSSSHDDTILIWDFLND 585
Score = 174 (66.3 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 73/284 (25%), Positives = 122/284 (42%)
Query: 248 LSSYNQQTIKK-KRRSLEIHFITVGERGIVRMWNADSACLYEQKSSDVTISF------EM 300
+S TIK + +LE I G G V D + SSD T+ EM
Sbjct: 317 VSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQYDERVIITG-SSDSTVRVWDVNAGEM 375
Query: 301 DDSKRGFTAATV-LPSNQGLLCVTADQQLLLYTTVEVPEKKMELILSKRLVGYNEEILDL 359
++ A + L N G++ + + + + P ++ L + LVG+ + +
Sbjct: 376 LNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAVWDMASPT---DITLRRVLVGHRAAVNVV 432
Query: 360 KFLGEEEQYLAVATNIEQVQVYDLSSMSCSYV--LAGHSEIVLCLDTCALSSGKILIVTG 417
F +++Y+ A+ ++V++ S+ C +V L GH + CL L+V+G
Sbjct: 433 DF---DDKYIVSASGDRTIKVWNTST--CEFVRTLNGHKRGIACLQY-----RDRLVVSG 482
Query: 418 SKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDD 477
S DN++RLWD E C+ V GH V + F K +VSG+ D IKVW D
Sbjct: 483 SSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKR---IVSGAYDGKIKVWDLVAALDP 539
Query: 478 AEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVW 521
L + +V G+ + L ++ + + S D T +W
Sbjct: 540 RAPAGTLCLRTLVEHSGR-VFRLQF--DEFQIVSSSHDDTILIW 580
Score = 159 (61.0 bits), Expect = 5.8e-08, P = 5.8e-08
Identities = 43/193 (22%), Positives = 84/193 (43%)
Query: 41 SINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKG 100
+I I D + K + G + ++ L L D++++ + +RVWD++ + L +
Sbjct: 324 TIKIWDKNTLECKRILTGHTGSV--LCLQYDERVIITGSSDSTVRVWDVNAGEMLNTLIH 381
Query: 101 HDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGF---CTHYFKGHKGVVSSILFHPDTD 157
H + + + G++ T DR + VWD+ GH+ V+ + D D
Sbjct: 382 HCEAVLHLRFN--NGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVV----DFD 435
Query: 158 KSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDL 217
+ S S D T++VW+ + V TL+ H + + ++S D + LWD+
Sbjct: 436 DKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYRD--RLVVSGSSDNTIRLWDI 493
Query: 218 RDYSCKLTVPTYE 230
+C + +E
Sbjct: 494 ECGACLRVLEGHE 506
Score = 144 (55.7 bits), Expect = 2.5e-06, P = 2.5e-06
Identities = 38/151 (25%), Positives = 69/151 (45%)
Query: 68 LSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVL 127
L DD+ + S I++WD +TL+C R GH G + + ++ T +D V
Sbjct: 309 LQYDDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQYDER--VIITGSSDSTVR 366
Query: 128 VWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKH 187
VWDV+ G + H V + F+ ++ + S D ++ VWD+ + + TL +
Sbjct: 367 VWDVNAGEMLNTLIHHCEAVLHLRFN----NGMMVTCSKDRSIAVWDMASPTDI-TLRRV 421
Query: 188 F--SRVTSMAITSDGSTLISAGRDKVVNLWD 216
R + D ++SA D+ + +W+
Sbjct: 422 LVGHRAAVNVVDFDDKYIVSASGDRTIKVWN 452
Score = 136 (52.9 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 35/150 (23%), Positives = 66/150 (44%)
Query: 505 NDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWS 564
+D + +G +D T +W L GH + +++ ++V+IT S D T+++W
Sbjct: 312 DDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQYD--ERVIITGSSDSTVRVWD 369
Query: 565 ISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIA---TYDKHED 621
++ G L T H +VL F +V+C D + +W + + I H
Sbjct: 370 VNAGEMLNTLIHHCEAVLHLRF--NNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRA 427
Query: 622 KIWALAVGKKTEMFATGGSDALVNLWHDST 651
+ + K + A+G D + +W+ ST
Sbjct: 428 AVNVVDFDDKYIVSASG--DRTIKVWNTST 455
Score = 133 (51.9 bits), Expect = 3.9e-05, P = 3.9e-05
Identities = 56/227 (24%), Positives = 104/227 (45%)
Query: 123 DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVA 182
D + +WD + C GH G V + + D+ ++ +GS D+TVRVWD+ A + +
Sbjct: 322 DNTIKIWDKNTLECKRILTGHTGSVLCLQY----DERVIITGSSDSTVRVWDVNAGEMLN 377
Query: 183 TLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYEMVEAVCAIPPGS 242
TL H V + + +++ +D+ + +WD+ + +T+ +V A+
Sbjct: 378 TLIHHCEAVLHLRFNN--GMMVTCSKDRSIAVWDMASPT-DITLRRV-LVGHRAAVNVVD 433
Query: 243 AFDSFL-SSYNQQTIKKKRRSLEIHFI-TVG--ERGIVRMWNADSACLYEQKSSDVTISF 298
D ++ S+ +TIK S F+ T+ +RGI + D L SSD TI
Sbjct: 434 FDDKYIVSASGDRTIKVWNTST-CEFVRTLNGHKRGIACLQYRDR--LVVSGSSDNTI-- 488
Query: 299 EMDDSKRGFTAATVLPSNQGLL-CVTADQQLLLYTTVEVPEKKMELI 344
+ D + G VL ++ L+ C+ D + ++ + K +L+
Sbjct: 489 RLWDIECG-ACLRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLV 534
Score = 129 (50.5 bits), Expect = 0.00011, P = 0.00011
Identities = 34/134 (25%), Positives = 65/134 (48%)
Query: 365 EEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVR 424
++Q + ++++D +++ C +L GH+ VLCL + +I+TGS D++VR
Sbjct: 312 DDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQY-----DERVIITGSSDSTVR 366
Query: 425 LWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNL 484
+WD + + H AV + F+ + +V+ S D +I VW D P ++
Sbjct: 367 VWDVNAGEMLNTLIHHCEAVLHLRFNNGM---MVTCSKDRSIAVW-------DMASPTDI 416
Query: 485 KAKAVVAAHGKDIN 498
+ V+ H +N
Sbjct: 417 TLRRVLVGHRAAVN 430
>MGI|MGI:1338871 [details] [associations]
symbol:Btrc "beta-transducin repeat containing protein"
species:10090 "Mus musculus" [GO:0000209 "protein
polyubiquitination" evidence=IDA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006470 "protein dephosphorylation"
evidence=IDA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=ISO] [GO:0008013 "beta-catenin binding"
evidence=IDA] [GO:0016055 "Wnt receptor signaling pathway"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=ISO]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=ISO]
[GO:0030163 "protein catabolic process" evidence=IMP] [GO:0031648
"protein destabilization" evidence=ISO] [GO:0033598 "mammary gland
epithelial cell proliferation" evidence=IMP] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IMP] [GO:0043122
"regulation of I-kappaB kinase/NF-kappaB cascade" evidence=IMP]
[GO:0045309 "protein phosphorylated amino acid binding"
evidence=IDA] [GO:0045862 "positive regulation of proteolysis"
evidence=ISO] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0051726 "regulation of
cell cycle" evidence=IMP] [GO:0060444 "branching involved in
mammary gland duct morphogenesis" evidence=IMP] [GO:0061136
"regulation of proteasomal protein catabolic process" evidence=IDA]
[GO:0071407 "cellular response to organic cyclic compound"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
UniPathway:UPA00143 MGI:MGI:1338871 GO:GO:0005829 GO:GO:0005634
GO:GO:0045892 GO:GO:0045893 GO:GO:0006470 GO:GO:0016055
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CH466534 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0051726 GO:GO:0006511
GO:GO:0019005 GO:GO:0004842 GO:GO:0045862 GO:GO:0008013
GO:GO:0000209 GO:GO:0071407 GO:GO:0045309 Reactome:REACT_109335
Reactome:REACT_24972 GO:GO:0061136 GO:GO:0031648 GO:GO:0043122
GO:GO:0060444 GO:GO:0033598 GO:GO:0042753 CTD:8945
HOGENOM:HOG000006638 HOVERGEN:HBG002521 KO:K03362 OMA:NAYLKPM
OrthoDB:EOG4F1X2M EMBL:AF099932 EMBL:AF110396 EMBL:AF112979
EMBL:AF081887 EMBL:AF391190 EMBL:AF391178 EMBL:AF391179
EMBL:AF391180 EMBL:AF391181 EMBL:AF391182 EMBL:AF391183
EMBL:AF391184 EMBL:AF391185 EMBL:AF391186 EMBL:AF391187
EMBL:AF391188 EMBL:AF391189 EMBL:AK145624 EMBL:AK156660
EMBL:AK220183 EMBL:BC003989 IPI:IPI00402788 IPI:IPI00877195
RefSeq:NP_001032847.2 RefSeq:NP_033901.1 UniGene:Mm.119717
UniGene:Mm.446448 HSSP:Q9Y297 ProteinModelPortal:Q3ULA2 SMR:Q3ULA2
IntAct:Q3ULA2 STRING:Q3ULA2 PhosphoSite:Q3ULA2
Ensembl:ENSMUST00000065601 Ensembl:ENSMUST00000111936 GeneID:12234
KEGG:mmu:12234 UCSC:uc008hqy.2 UCSC:uc008hqz.2
GeneTree:ENSGT00690000101849 InParanoid:Q571K6 NextBio:280656
Bgee:Q3ULA2 Genevestigator:Q3ULA2 Uniprot:Q3ULA2
Length = 605
Score = 269 (99.8 bits), Expect = 5.4e-20, P = 5.4e-20
Identities = 61/221 (27%), Positives = 116/221 (52%)
Query: 414 IVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDG 473
IV+G +DN++++WD + C + TGH G+V + + +++ +++GSSD T++VW +
Sbjct: 316 IVSGLRDNTIKIWDKSTLECKRILTGHTGSVLCLQYDERV---IITGSSDSTVRVWDVN- 371
Query: 474 LSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFR 533
A + +N + H + + L N+ ++ T S+DR+ VW + + R
Sbjct: 372 ----AGEMLN-----TLIHHCEAVLHLRF--NNGMMVTCSKDRSIAVWDMASPTDITLRR 420
Query: 534 ---GHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRG 590
GH+ + V+F D+ +++ASGD+TIK+W+ S ++T GH + A R
Sbjct: 421 VLVGHRAAVNVVDFD--DKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGI--ACLQYRD 476
Query: 591 AQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKK 631
+VS +D ++LW + G C+ + HE+ + + K
Sbjct: 477 RLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNK 517
Score = 252 (93.8 bits), Expect = 4.0e-18, P = 4.0e-18
Identities = 70/244 (28%), Positives = 120/244 (49%)
Query: 413 LIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFD 472
+I+TGS D++VR+WD + + H AV + F+ + +V+ S D +I VW
Sbjct: 355 VIITGSSDSTVRVWDVNAGEMLNTLIHHCEAVLHLRFNNGM---MVTCSKDRSIAVW--- 408
Query: 473 GLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTF 532
D P ++ + V+ H +N V +D + + S DRT VW V T
Sbjct: 409 ----DMASPTDITLRRVLVGHRAAVN--VVDFDDKYIVSASGDRTIKVWNTSTCEFVRTL 462
Query: 533 RGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQ 592
GHKRGI +++ D++V++ S D TI++W I G+CL+ EGH V F + +
Sbjct: 463 NGHKRGIACLQYR--DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNK--R 518
Query: 593 IVSCGADGLVKLWTVRT--------GE-CIATYDKHEDKIWALAVGKKTEMFATGGSDAL 643
IVS DG +K+W + G C+ T +H +++ L + ++ ++ D +
Sbjct: 519 IVSGAYDGKIKVWDLMAALDPRAPAGTLCLRTLVEHSGRVFRLQFDE-FQIVSSSHDDTI 577
Query: 644 VNLW 647
+ +W
Sbjct: 578 L-IW 580
Score = 208 (78.3 bits), Expect = 2.7e-13, P = 2.7e-13
Identities = 56/205 (27%), Positives = 100/205 (48%)
Query: 29 SDGSFIACACGESINIVDLSNAS---IKSTIEGGSDTITALALSPDDKLLFSSGHSREIR 85
++G + C+ SI + D+++ + ++ + G + + DDK + S+ R I+
Sbjct: 392 NNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIK 449
Query: 86 VWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGA-DRKVLVWDVDGGFCTHYFKGHK 144
VW+ ST + +R+ GH G+AC L +G+ D + +WD++ G C +GH+
Sbjct: 450 VWNTSTCEFVRTLNGHKR---GIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHE 506
Query: 145 GVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKK---------CVATLDKHFSRVTSMA 195
+V I F D + SG+ D ++VWDL+A C+ TL +H RV +
Sbjct: 507 ELVRCIRF----DNKRIVSGAYDGKIKVWDLMAALDPRAPAGTLCLRTLVEHSGRVFRLQ 562
Query: 196 ITSDGSTLISAGRDKVVNLWD-LRD 219
D ++S+ D + +WD L D
Sbjct: 563 F--DEFQIVSSSHDDTILIWDFLND 585
Score = 173 (66.0 bits), Expect = 1.7e-09, P = 1.7e-09
Identities = 74/284 (26%), Positives = 122/284 (42%)
Query: 248 LSSYNQQTIKKKRRS-LEIHFITVGERGIVRMWNADSACLYEQKSSDVTISF------EM 300
+S TIK +S LE I G G V D + SSD T+ EM
Sbjct: 317 VSGLRDNTIKIWDKSTLECKRILTGHTGSVLCLQYDERVIITG-SSDSTVRVWDVNAGEM 375
Query: 301 DDSKRGFTAATV-LPSNQGLLCVTADQQLLLYTTVEVPEKKMELILSKRLVGYNEEILDL 359
++ A + L N G++ + + + + P ++ L + LVG+ + +
Sbjct: 376 LNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAVWDMASPT---DITLRRVLVGHRAAVNVV 432
Query: 360 KFLGEEEQYLAVATNIEQVQVYDLSSMSCSYV--LAGHSEIVLCLDTCALSSGKILIVTG 417
F +++Y+ A+ ++V++ S+ C +V L GH + CL L+V+G
Sbjct: 433 DF---DDKYIVSASGDRTIKVWNTST--CEFVRTLNGHKRGIACLQY-----RDRLVVSG 482
Query: 418 SKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDD 477
S DN++RLWD E C+ V GH V + F K +VSG+ D IKVW D
Sbjct: 483 SSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKR---IVSGAYDGKIKVWDLMAALDP 539
Query: 478 AEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVW 521
L + +V G+ + L ++ + + S D T +W
Sbjct: 540 RAPAGTLCLRTLVEHSGR-VFRLQF--DEFQIVSSSHDDTILIW 580
Score = 162 (62.1 bits), Expect = 2.7e-08, P = 2.7e-08
Identities = 44/193 (22%), Positives = 84/193 (43%)
Query: 41 SINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKG 100
+I I D S K + G + ++ L L D++++ + +RVWD++ + L +
Sbjct: 324 TIKIWDKSTLECKRILTGHTGSV--LCLQYDERVIITGSSDSTVRVWDVNAGEMLNTLIH 381
Query: 101 HDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGF---CTHYFKGHKGVVSSILFHPDTD 157
H + + + G++ T DR + VWD+ GH+ V+ + D D
Sbjct: 382 HCEAVLHLRFN--NGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVV----DFD 435
Query: 158 KSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDL 217
+ S S D T++VW+ + V TL+ H + + ++S D + LWD+
Sbjct: 436 DKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYRD--RLVVSGSSDNTIRLWDI 493
Query: 218 RDYSCKLTVPTYE 230
+C + +E
Sbjct: 494 ECGACLRVLEGHE 506
Score = 147 (56.8 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 39/151 (25%), Positives = 69/151 (45%)
Query: 68 LSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVL 127
L DD+ + S I++WD STL+C R GH G + + ++ T +D V
Sbjct: 309 LQYDDQKIVSGLRDNTIKIWDKSTLECKRILTGHTGSVLCLQYDER--VIITGSSDSTVR 366
Query: 128 VWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKH 187
VWDV+ G + H V + F+ ++ + S D ++ VWD+ + + TL +
Sbjct: 367 VWDVNAGEMLNTLIHHCEAVLHLRFN----NGMMVTCSKDRSIAVWDMASPTDI-TLRRV 421
Query: 188 F--SRVTSMAITSDGSTLISAGRDKVVNLWD 216
R + D ++SA D+ + +W+
Sbjct: 422 LVGHRAAVNVVDFDDKYIVSASGDRTIKVWN 452
Score = 137 (53.3 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 35/150 (23%), Positives = 66/150 (44%)
Query: 505 NDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWS 564
+D + +G +D T +W L GH + +++ ++V+IT S D T+++W
Sbjct: 312 DDQKIVSGLRDNTIKIWDKSTLECKRILTGHTGSVLCLQYD--ERVIITGSSDSTVRVWD 369
Query: 565 ISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIA---TYDKHED 621
++ G L T H +VL F +V+C D + +W + + I H
Sbjct: 370 VNAGEMLNTLIHHCEAVLHLRF--NNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRA 427
Query: 622 KIWALAVGKKTEMFATGGSDALVNLWHDST 651
+ + K + A+G D + +W+ ST
Sbjct: 428 AVNVVDFDDKYIVSASG--DRTIKVWNTST 455
Score = 132 (51.5 bits), Expect = 5.0e-05, P = 5.0e-05
Identities = 35/134 (26%), Positives = 65/134 (48%)
Query: 365 EEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVR 424
++Q + ++++D S++ C +L GH+ VLCL + +I+TGS D++VR
Sbjct: 312 DDQKIVSGLRDNTIKIWDKSTLECKRILTGHTGSVLCLQY-----DERVIITGSSDSTVR 366
Query: 425 LWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNL 484
+WD + + H AV + F+ + +V+ S D +I VW D P ++
Sbjct: 367 VWDVNAGEMLNTLIHHCEAVLHLRFNNGM---MVTCSKDRSIAVW-------DMASPTDI 416
Query: 485 KAKAVVAAHGKDIN 498
+ V+ H +N
Sbjct: 417 TLRRVLVGHRAAVN 430
>UNIPROTKB|F1LMH8 [details] [associations]
symbol:Btrc "Protein Btrc" species:10116 "Rattus
norvegicus" [GO:0000209 "protein polyubiquitination" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0006470 "protein dephosphorylation" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0008013 "beta-catenin binding" evidence=IEA] [GO:0019005 "SCF
ubiquitin ligase complex" evidence=IEA] [GO:0031648 "protein
destabilization" evidence=IEA] [GO:0033598 "mammary gland
epithelial cell proliferation" evidence=IEA] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IEA] [GO:0043122
"regulation of I-kappaB kinase/NF-kappaB cascade" evidence=IEA]
[GO:0045309 "protein phosphorylated amino acid binding"
evidence=IEA] [GO:0045862 "positive regulation of proteolysis"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0051726 "regulation of
cell cycle" evidence=IEA] [GO:0060444 "branching involved in
mammary gland duct morphogenesis" evidence=IEA] [GO:0061136
"regulation of proteasomal protein catabolic process" evidence=IEA]
[GO:0071407 "cellular response to organic cyclic compound"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
RGD:1359721 GO:GO:0045892 GO:GO:0045893 GO:GO:0006470
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GO:GO:0051726 GO:GO:0006511 GO:GO:0019005
GO:GO:0045862 GO:GO:0000209 GO:GO:0071407 GO:GO:0061136
GO:GO:0031648 GO:GO:0043122 GO:GO:0060444 GO:GO:0033598
GO:GO:0042753 GeneTree:ENSGT00690000101849 IPI:IPI00372531
PRIDE:F1LMH8 Ensembl:ENSRNOT00000022426 ArrayExpress:F1LMH8
Uniprot:F1LMH8
Length = 605
Score = 269 (99.8 bits), Expect = 5.4e-20, P = 5.4e-20
Identities = 61/221 (27%), Positives = 116/221 (52%)
Query: 414 IVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDG 473
IV+G +DN++++WD + C + TGH G+V + + +++ +++GSSD T++VW +
Sbjct: 316 IVSGLRDNTIKIWDKSTLECKRILTGHTGSVLCLQYDERV---IITGSSDSTVRVWDVN- 371
Query: 474 LSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFR 533
A + +N + H + + L N+ ++ T S+DR+ VW + + R
Sbjct: 372 ----AGEMLN-----TLIHHCEAVLHLRF--NNGMMVTCSKDRSIAVWDMASPTDITLRR 420
Query: 534 ---GHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRG 590
GH+ + V+F D+ +++ASGD+TIK+W+ S ++T GH + A R
Sbjct: 421 VLVGHRAAVNVVDFD--DKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGI--ACLQYRD 476
Query: 591 AQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKK 631
+VS +D ++LW + G C+ + HE+ + + K
Sbjct: 477 RLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNK 517
Score = 252 (93.8 bits), Expect = 4.0e-18, P = 4.0e-18
Identities = 70/244 (28%), Positives = 120/244 (49%)
Query: 413 LIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFD 472
+I+TGS D++VR+WD + + H AV + F+ + +V+ S D +I VW
Sbjct: 355 VIITGSSDSTVRVWDVNAGEMLNTLIHHCEAVLHLRFNNGM---MVTCSKDRSIAVW--- 408
Query: 473 GLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTF 532
D P ++ + V+ H +N V +D + + S DRT VW V T
Sbjct: 409 ----DMASPTDITLRRVLVGHRAAVN--VVDFDDKYIVSASGDRTIKVWNTSTCEFVRTL 462
Query: 533 RGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQ 592
GHKRGI +++ D++V++ S D TI++W I G+CL+ EGH V F + +
Sbjct: 463 NGHKRGIACLQYR--DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNK--R 518
Query: 593 IVSCGADGLVKLWTVRT--------GE-CIATYDKHEDKIWALAVGKKTEMFATGGSDAL 643
IVS DG +K+W + G C+ T +H +++ L + ++ ++ D +
Sbjct: 519 IVSGAYDGKIKVWDLMAALDPRAPAGTLCLRTLVEHSGRVFRLQFDE-FQIVSSSHDDTI 577
Query: 644 VNLW 647
+ +W
Sbjct: 578 L-IW 580
Score = 208 (78.3 bits), Expect = 2.7e-13, P = 2.7e-13
Identities = 56/205 (27%), Positives = 100/205 (48%)
Query: 29 SDGSFIACACGESINIVDLSNAS---IKSTIEGGSDTITALALSPDDKLLFSSGHSREIR 85
++G + C+ SI + D+++ + ++ + G + + DDK + S+ R I+
Sbjct: 392 NNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIK 449
Query: 86 VWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGA-DRKVLVWDVDGGFCTHYFKGHK 144
VW+ ST + +R+ GH G+AC L +G+ D + +WD++ G C +GH+
Sbjct: 450 VWNTSTCEFVRTLNGHKR---GIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHE 506
Query: 145 GVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKK---------CVATLDKHFSRVTSMA 195
+V I F D + SG+ D ++VWDL+A C+ TL +H RV +
Sbjct: 507 ELVRCIRF----DNKRIVSGAYDGKIKVWDLMAALDPRAPAGTLCLRTLVEHSGRVFRLQ 562
Query: 196 ITSDGSTLISAGRDKVVNLWD-LRD 219
D ++S+ D + +WD L D
Sbjct: 563 F--DEFQIVSSSHDDTILIWDFLND 585
Score = 173 (66.0 bits), Expect = 1.7e-09, P = 1.7e-09
Identities = 74/284 (26%), Positives = 122/284 (42%)
Query: 248 LSSYNQQTIKKKRRS-LEIHFITVGERGIVRMWNADSACLYEQKSSDVTISF------EM 300
+S TIK +S LE I G G V D + SSD T+ EM
Sbjct: 317 VSGLRDNTIKIWDKSTLECKRILTGHTGSVLCLQYDERVIITG-SSDSTVRVWDVNAGEM 375
Query: 301 DDSKRGFTAATV-LPSNQGLLCVTADQQLLLYTTVEVPEKKMELILSKRLVGYNEEILDL 359
++ A + L N G++ + + + + P ++ L + LVG+ + +
Sbjct: 376 LNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAVWDMASPT---DITLRRVLVGHRAAVNVV 432
Query: 360 KFLGEEEQYLAVATNIEQVQVYDLSSMSCSYV--LAGHSEIVLCLDTCALSSGKILIVTG 417
F +++Y+ A+ ++V++ S+ C +V L GH + CL L+V+G
Sbjct: 433 DF---DDKYIVSASGDRTIKVWNTST--CEFVRTLNGHKRGIACLQY-----RDRLVVSG 482
Query: 418 SKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDD 477
S DN++RLWD E C+ V GH V + F K +VSG+ D IKVW D
Sbjct: 483 SSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKR---IVSGAYDGKIKVWDLMAALDP 539
Query: 478 AEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVW 521
L + +V G+ + L ++ + + S D T +W
Sbjct: 540 RAPAGTLCLRTLVEHSGR-VFRLQF--DEFQIVSSSHDDTILIW 580
Score = 162 (62.1 bits), Expect = 2.7e-08, P = 2.7e-08
Identities = 44/193 (22%), Positives = 84/193 (43%)
Query: 41 SINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKG 100
+I I D S K + G + ++ L L D++++ + +RVWD++ + L +
Sbjct: 324 TIKIWDKSTLECKRILTGHTGSV--LCLQYDERVIITGSSDSTVRVWDVNAGEMLNTLIH 381
Query: 101 HDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGF---CTHYFKGHKGVVSSILFHPDTD 157
H + + + G++ T DR + VWD+ GH+ V+ + D D
Sbjct: 382 HCEAVLHLRFN--NGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVV----DFD 435
Query: 158 KSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDL 217
+ S S D T++VW+ + V TL+ H + + ++S D + LWD+
Sbjct: 436 DKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYRD--RLVVSGSSDNTIRLWDI 493
Query: 218 RDYSCKLTVPTYE 230
+C + +E
Sbjct: 494 ECGACLRVLEGHE 506
Score = 147 (56.8 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 39/151 (25%), Positives = 69/151 (45%)
Query: 68 LSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVL 127
L DD+ + S I++WD STL+C R GH G + + ++ T +D V
Sbjct: 309 LQYDDQKIVSGLRDNTIKIWDKSTLECKRILTGHTGSVLCLQYDER--VIITGSSDSTVR 366
Query: 128 VWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKH 187
VWDV+ G + H V + F+ ++ + S D ++ VWD+ + + TL +
Sbjct: 367 VWDVNAGEMLNTLIHHCEAVLHLRFN----NGMMVTCSKDRSIAVWDMASPTDI-TLRRV 421
Query: 188 F--SRVTSMAITSDGSTLISAGRDKVVNLWD 216
R + D ++SA D+ + +W+
Sbjct: 422 LVGHRAAVNVVDFDDKYIVSASGDRTIKVWN 452
Score = 137 (53.3 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 35/150 (23%), Positives = 66/150 (44%)
Query: 505 NDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWS 564
+D + +G +D T +W L GH + +++ ++V+IT S D T+++W
Sbjct: 312 DDQKIVSGLRDNTIKIWDKSTLECKRILTGHTGSVLCLQYD--ERVIITGSSDSTVRVWD 369
Query: 565 ISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIA---TYDKHED 621
++ G L T H +VL F +V+C D + +W + + I H
Sbjct: 370 VNAGEMLNTLIHHCEAVLHLRF--NNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRA 427
Query: 622 KIWALAVGKKTEMFATGGSDALVNLWHDST 651
+ + K + A+G D + +W+ ST
Sbjct: 428 AVNVVDFDDKYIVSASG--DRTIKVWNTST 455
Score = 132 (51.5 bits), Expect = 5.0e-05, P = 5.0e-05
Identities = 35/134 (26%), Positives = 65/134 (48%)
Query: 365 EEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVR 424
++Q + ++++D S++ C +L GH+ VLCL + +I+TGS D++VR
Sbjct: 312 DDQKIVSGLRDNTIKIWDKSTLECKRILTGHTGSVLCLQY-----DERVIITGSSDSTVR 366
Query: 425 LWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNL 484
+WD + + H AV + F+ + +V+ S D +I VW D P ++
Sbjct: 367 VWDVNAGEMLNTLIHHCEAVLHLRFNNGM---MVTCSKDRSIAVW-------DMASPTDI 416
Query: 485 KAKAVVAAHGKDIN 498
+ V+ H +N
Sbjct: 417 TLRRVLVGHRAAVN 430
>UNIPROTKB|B4JW81 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7222 "Drosophila grimshawi"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016226 EMBL:CH916375 OMA:SWKCVCT OrthoDB:EOG45DV4X
RefSeq:XP_001995147.1 ProteinModelPortal:B4JW81 STRING:B4JW81
EnsemblMetazoa:FBtr0158402 GeneID:6569131 KEGG:dgr:Dgri_GH22988
FlyBase:FBgn0130445 InParanoid:B4JW81 Uniprot:B4JW81
Length = 331
Score = 206 (77.6 bits), Expect = 5.5e-20, Sum P(2) = 5.5e-20
Identities = 60/194 (30%), Positives = 90/194 (46%)
Query: 32 SFIACACGESINIVDLS-NASIKSTI--EGGSDTITALALSPDDKLLFSSGHSREIRVWD 88
SF +C ++I I S N TI +G TI + SP + L S+ +W
Sbjct: 28 SFASCGEDKAIRIWSQSGNTWTTKTILSDGHKRTIREVRWSPCGEYLASASFDATTAIW- 86
Query: 89 LSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGG--F-CTHYFKGHKG 145
S +C + +GH+ ++ SGGLLAT D+ V +W+V G F C H
Sbjct: 87 -SKHECNATLEGHENEVKSVSWSQSGGLLATCSRDKSVWIWEVAGDDEFECAAVLNAHTQ 145
Query: 146 VVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKK----CVATLDKHFSRVTSMAITSDGS 201
V +++HP K +L S S D T++++ A C ATL H S V S+ +DG
Sbjct: 146 DVKRVVWHPS--KEILASASYDNTIKMYAESALDSDWDCTATLSSHTSTVWSIDFEADGE 203
Query: 202 TLISAGRDKVVNLW 215
L+S D + +W
Sbjct: 204 RLVSCSDDTTLKIW 217
Score = 176 (67.0 bits), Expect = 2.1e-10, P = 2.1e-10
Identities = 55/219 (25%), Positives = 95/219 (43%)
Query: 419 KDNSVRLWDSESRCCVG---VGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLS 475
+D ++R+W + GH + V +S +L S S D T +WS
Sbjct: 34 EDKAIRIWSQSGNTWTTKTILSDGHKRTIREVRWSP-CGEYLASASFDATTAIWS----- 87
Query: 476 DDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLP---DLVSVVTF 532
+ A + H ++ S++ + + L+ T S+D++ +W + +
Sbjct: 88 -------KHECNATLEGHENEVKSVSWSQSGGLLATCSRDKSVWIWEVAGDDEFECAAVL 140
Query: 533 RGHKRGIWSVEFSPVDQVVITASGDKTIKIWSIS----DGSCLKTFEGHTSSVLRASFLT 588
H + + V + P +++ +AS D TIK+++ S D C T HTS+V F
Sbjct: 141 NAHTQDVKRVVWHPSKEILASASYDNTIKMYAESALDSDWDCTATLSSHTSTVWSIDFEA 200
Query: 589 RGAQIVSCGADGLVKLWTV-RTG-EC-IATYDKHEDKIW 624
G ++VSC D +K+W G E IAT DK +W
Sbjct: 201 DGERLVSCSDDTTLKIWRAYHPGNEAGIATPDK--TTVW 237
Score = 172 (65.6 bits), Expect = 5.8e-10, P = 5.8e-10
Identities = 49/217 (22%), Positives = 88/217 (40%)
Query: 439 GHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVA-AHGKDI 497
GH G + VA+ K +F G D I++WS G + K +++ H + I
Sbjct: 12 GHKGRIWGVAWHPKGNSFASCGE-DKAIRIWSQSGNT--------WTTKTILSDGHKRTI 62
Query: 498 NSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGD 557
+ +P + + S D T +W + + T GH+ + SV +S ++ T S D
Sbjct: 63 REVRWSPCGEYLASASFDATTAIWSKHECNA--TLEGHENEVKSVSWSQSGGLLATCSRD 120
Query: 558 KTIKIWSIS---DGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRT----G 610
K++ IW ++ + C HT V R + + S D +K++
Sbjct: 121 KSVWIWEVAGDDEFECAAVLNAHTQDVKRVVWHPSKEILASASYDNTIKMYAESALDSDW 180
Query: 611 ECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLW 647
+C AT H +W++ E + D + +W
Sbjct: 181 DCTATLSSHTSTVWSIDFEADGERLVSCSDDTTLKIW 217
Score = 168 (64.2 bits), Expect = 2.5e-15, Sum P(2) = 2.5e-15
Identities = 49/166 (29%), Positives = 77/166 (46%)
Query: 99 KGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTH---YFKGHKGVVSSILFHPD 155
+GH G G+A HP G A+ G D+ + +W G T GHK + + + P
Sbjct: 11 QGHKGRIWGVAWHPKGNSFASCGEDKAIRIWSQSGNTWTTKTILSDGHKRTIREVRWSPC 70
Query: 156 TDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLW 215
+ L S S DAT +W +C ATL+ H + V S++ + G L + RDK V +W
Sbjct: 71 GE--YLASASFDATTAIWS--KHECNATLEGHENEVKSVSWSQSGGLLATCSRDKSVWIW 126
Query: 216 DLR---DYSCKLTVPTYEM-VEAVCAIPPGSAFDSFLSSYNQQTIK 257
++ ++ C + + V+ V P S +SY+ TIK
Sbjct: 127 EVAGDDEFECAAVLNAHTQDVKRVVWHPSKEILAS--ASYDN-TIK 169
Score = 155 (59.6 bits), Expect = 4.8e-08, P = 4.8e-08
Identities = 48/164 (29%), Positives = 70/164 (42%)
Query: 490 VAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQ 549
VA H K NS A D + SQ W ++S GHKR I V +SP +
Sbjct: 20 VAWHPKG-NSFASCGEDKAIRIWSQSGNT--WTTKTILS----DGHKRTIREVRWSPCGE 72
Query: 550 VVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRT 609
+ +AS D T IWS + C T EGH + V S+ G + +C D V +W V
Sbjct: 73 YLASASFDATTAIWSKHE--CNATLEGHENEVKSVSWSQSGGLLATCSRDKSVWIWEVAG 130
Query: 610 G---ECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLWHDS 650
EC A + H + + E+ A+ D + ++ +S
Sbjct: 131 DDEFECAAVLNAHTQDVKRVVWHPSKEILASASYDNTIKMYAES 174
Score = 140 (54.3 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 34/120 (28%), Positives = 56/120 (46%)
Query: 531 TFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGS-CLKTF--EGHTSSVLRASFL 587
T +GHK IW V + P + DK I+IWS S + KT +GH ++ +
Sbjct: 9 TLQGHKGRIWGVAWHPKGNSFASCGEDKAIRIWSQSGNTWTTKTILSDGHKRTIREVRWS 68
Query: 588 TRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLW 647
G + S D +W+ EC AT + HE+++ +++ + + AT D V +W
Sbjct: 69 PCGEYLASASFDATTAIWSKH--ECNATLEGHENEVKSVSWSQSGGLLATCSRDKSVWIW 126
Score = 132 (51.5 bits), Expect = 3.5e-11, Sum P(2) = 3.5e-11
Identities = 46/189 (24%), Positives = 76/189 (40%)
Query: 52 IKSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLS----TLKCLRSWKGHDGPAIG 107
++ T++G I +A P S G + IR+W S T K + S GH
Sbjct: 6 LEHTLQGHKGRIWGVAWHPKGNSFASCGEDKAIRIWSQSGNTWTTKTILS-DGHKRTIRE 64
Query: 108 MACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDD 167
+ P G LA+A D +W C +GH+ V S+ + LL + S D
Sbjct: 65 VRWSPCGEYLASASFDATTAIWSKHE--CNATLEGHENEVKSVSW--SQSGGLLATCSRD 120
Query: 168 ATVRVWDLLAK---KCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLR----DY 220
+V +W++ +C A L+ H V + L SA D + ++ D+
Sbjct: 121 KSVWIWEVAGDDEFECAAVLNAHTQDVKRVVWHPSKEILASASYDNTIKMYAESALDSDW 180
Query: 221 SCKLTVPTY 229
C T+ ++
Sbjct: 181 DCTATLSSH 189
Score = 131 (51.2 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 74/280 (26%), Positives = 115/280 (41%)
Query: 367 QYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLW 426
+YLA A+ ++ S C+ L GH V + + + S G L+ T S+D SV +W
Sbjct: 72 EYLASASFDATTAIW--SKHECNATLEGHENEVKSV-SWSQSGG--LLATCSRDKSVWIW 126
Query: 427 ----DSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPM 482
D E C V H V V + + L S S D+TIK+++ L D +
Sbjct: 127 EVAGDDEFECAA-VLNAHTQDVKRVVWHPS-KEILASASYDNTIKMYAESALDSDWD--- 181
Query: 483 NLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRL-----------PDLVSV-- 529
A +++H + S+ + + + S D T +WR PD +V
Sbjct: 182 ---CTATLSSHTSTVWSIDFEADGERLVSCSDDTTLKIWRAYHPGNEAGIATPDKTTVWK 238
Query: 530 --VTFRG-HKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASF 586
T G H R ++ V + + ++ +A GD I+I+ S S K E T +L A
Sbjct: 239 CVCTVAGQHSRAVYDVSWCKLTGLIASACGDDGIRIFKESSDS--KRDEP-TFELLTAE- 294
Query: 587 LTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWAL 626
A A V+ V G+ I+ D KIW L
Sbjct: 295 --ESAHEQDVNA---VEWNPVTAGQLISCSDDGTIKIWKL 329
Score = 98 (39.6 bits), Expect = 5.5e-20, Sum P(2) = 5.5e-20
Identities = 44/160 (27%), Positives = 70/160 (43%)
Query: 462 SDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAP-NDSLVCTGSQDRTACV 520
S HT VWS D D E+ ++ + A P N++ + T D+T V
Sbjct: 187 SSHTSTVWSID-FEADGERLVSCSDDTTLKIWR------AYHPGNEAGIAT--PDKTT-V 236
Query: 521 WRLPDLVSVVTFRG-HKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLK--TFE-- 575
W+ V T G H R ++ V + + ++ +A GD I+I+ S S TFE
Sbjct: 237 WKC-----VCTVAGQHSRAVYDVSWCKLTGLIASACGDDGIRIFKESSDSKRDEPTFELL 291
Query: 576 -----GHTSSVLRASF--LTRGAQIVSCGADGLVKLWTVR 608
H V + +T G Q++SC DG +K+W ++
Sbjct: 292 TAEESAHEQDVNAVEWNPVTAG-QLISCSDDGTIKIWKLQ 330
Score = 74 (31.1 bits), Expect = 7.8e-13, Sum P(2) = 7.8e-13
Identities = 34/151 (22%), Positives = 64/151 (42%)
Query: 433 CVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDA-----EQPMNLKAK 487
C + H V ++ F + LVS S D T+K+W ++A ++ K
Sbjct: 182 CTATLSSHTSTVWSIDFEADGER-LVSCSDDTTLKIWRAYHPGNEAGIATPDKTTVWKCV 240
Query: 488 AVVAA-HGKDINSLAVAPNDSLVCTGSQDRTACVW-------RLPDLVSVVTFR--GHKR 537
VA H + + ++ L+ + D ++ R ++T H++
Sbjct: 241 CTVAGQHSRAVYDVSWCKLTGLIASACGDDGIRIFKESSDSKRDEPTFELLTAEESAHEQ 300
Query: 538 GIWSVEFSPVDQ-VVITASGDKTIKIWSISD 567
+ +VE++PV +I+ S D TIKIW + +
Sbjct: 301 DVNAVEWNPVTAGQLISCSDDGTIKIWKLQE 331
>UNIPROTKB|Q58D20 [details] [associations]
symbol:NLE1 "Notchless protein homolog 1" species:9913 "Bos
taurus" [GO:0005730 "nucleolus" evidence=IEA] [GO:0007219 "Notch
signaling pathway" evidence=IEA] [GO:0001826 "inner cell mass cell
differentiation" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GeneTree:ENSGT00690000102167 PRINTS:PR00319
GO:GO:0001826 HOGENOM:HOG000091641 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 EMBL:BT021777 IPI:IPI00688704
RefSeq:NP_001014887.1 UniGene:Bt.22388 ProteinModelPortal:Q58D20
STRING:Q58D20 PRIDE:Q58D20 Ensembl:ENSBTAT00000025423 GeneID:509793
KEGG:bta:509793 CTD:54475 HOVERGEN:HBG007602 InParanoid:Q58D20
OrthoDB:EOG4BCDMS NextBio:20869131 Uniprot:Q58D20
Length = 486
Score = 238 (88.8 bits), Expect = 8.0e-17, P = 8.0e-17
Identities = 92/390 (23%), Positives = 172/390 (44%)
Query: 54 STIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPS 113
S++EG S+ + ++A SP K L S +R WDLST + +GH + ++ P
Sbjct: 109 SSLEGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHFTCQGHRHWVLSISWSPD 168
Query: 114 GGLLATAGADRKVLVWDVDGGFCT-HYFKGHKGVVSSILFHP---DTDKSLLFSGSDDAT 169
G LA+ + ++L+WD G GH ++++ + P + + + S S D +
Sbjct: 169 GKKLASGCKNGQILLWDPSTGKQVGRALTGHSKWITALSWEPLHANPECRYVASSSKDGS 228
Query: 170 VRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRD-YSCKLTVPT 228
VRVWD A +C TL H VT + DG L SA +D+ + +W D C+
Sbjct: 229 VRVWDTTAGRCERTLTGHAQSVTCLRWGGDG-LLYSASQDRTIKVWRAHDGVLCRTLQGH 287
Query: 229 YEMVEAVC-----AIPPGSAFDSFLSSYNQQTIKK-----KRRSLEIHFITVGERGIVRM 278
V + A+ G AF+ +S N Q ++ K R+L + + G+ G R+
Sbjct: 288 GHWVNTMALSTDYALRTG-AFEPAEASVNAQDLRGSLQELKERALSRYNLVRGQ-GPERL 345
Query: 279 WN-ADSACLYE-QKSSDVTISFEMDDSKRGFTAATVLPSNQGLLCVTADQQLLLYTTVEV 336
+ +D L+ + D M + P ++ + + D+ + L+
Sbjct: 346 VSGSDDFTLFLWSPAEDKKPLARMTGHQALINQVVFSPDSRVIASASFDKSIKLWDG--- 402
Query: 337 PEKKMELILSKRLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHS 396
+ + + S R G+ + + + + + L ++ ++V+D+ + S L GH+
Sbjct: 403 --RTGKYLASLR--GHVAAVYQIAW-SADSRLLVSGSSDSTLKVWDVKAQKLSTDLPGHA 457
Query: 397 EIVLCLDTCALSSGKILIVTGSKDNSVRLW 426
+ V +D G+ + +G KD +R+W
Sbjct: 458 DEVYAVDWSP--DGQ-RVASGGKDKCLRIW 484
Score = 236 (88.1 bits), Expect = 1.3e-16, P = 1.3e-16
Identities = 76/308 (24%), Positives = 140/308 (45%)
Query: 345 LSKRLVGYNEEILDLKF----LGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVL 400
+ + L G+++ I L + E +Y+A ++ V+V+D ++ C L GH++ V
Sbjct: 192 VGRALTGHSKWITALSWEPLHANPECRYVASSSKDGSVRVWDTTAGRCERTLTGHAQSVT 251
Query: 401 CLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSG 460
CL G L+ + S+D ++++W + GH V +A S L +G
Sbjct: 252 CLRW----GGDGLLYSASQDRTIKVWRAHDGVLCRTLQGHGHWVNTMALSTDYA--LRTG 305
Query: 461 SSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACV 520
+ + + L ++ LK +A+ N + + LV +GS D T +
Sbjct: 306 AFEPAEASVNAQDLRGSLQE---LKERAL-----SRYNLVRGQGPERLV-SGSDDFTLFL 356
Query: 521 WR-LPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTS 579
W D + GH+ I V FSP +V+ +AS DK+IK+W G L + GH +
Sbjct: 357 WSPAEDKKPLARMTGHQALINQVVFSPDSRVIASASFDKSIKLWDGRTGKYLASLRGHVA 416
Query: 580 SVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGG 639
+V + ++ +VS +D +K+W V+ + H D+++A+ + A+GG
Sbjct: 417 AVYQIAWSADSRLLVSGSSDSTLKVWDVKAQKLSTDLPGHADEVYAVDWSPDGQRVASGG 476
Query: 640 SDALVNLW 647
D + +W
Sbjct: 477 KDKCLRIW 484
Score = 200 (75.5 bits), Expect = 1.3e-12, P = 1.3e-12
Identities = 99/398 (24%), Positives = 176/398 (44%)
Query: 93 KCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYF-KGHKGVVSSIL 151
+C S +GH I +A P+G LA+ D V WD+ H+ +GH+ V SI
Sbjct: 106 RCTSSLEGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTE-TPHFTCQGHRHWVLSIS 164
Query: 152 FHPDTDKSLLFSGSDDATVRVWDLLAKKCVA-TLDKHFSRVTSMA-----ITSDGSTLIS 205
+ PD K L SG + + +WD K V L H +T+++ + + S
Sbjct: 165 WSPDGKK--LASGCKNGQILLWDPSTGKQVGRALTGHSKWITALSWEPLHANPECRYVAS 222
Query: 206 AGRDKVVNLWDLRDYSCKLTVPTYEMVEAVCAIPPGSAFDSFLSSYNQ-QTIKKKR---- 260
+ +D V +WD C+ T+ + ++V + G D L S +Q +TIK R
Sbjct: 223 SSKDGSVRVWDTTAGRCERTLTGH--AQSVTCLRWGG--DGLLYSASQDRTIKVWRAHDG 278
Query: 261 ---RSLEIHFITVGERGIVRMWNADSACLYEQKSSDVT---ISFEMDDSKRGFTAATVLP 314
R+L+ H V + + + +E + V + + + K + L
Sbjct: 279 VLCRTLQGHGHWVNTMALSTDYALRTGA-FEPAEASVNAQDLRGSLQELKERALSRYNLV 337
Query: 315 SNQG---LLCVTADQQLLLYTTVEVPEKKMELILSKRLVGYNEEILDLKFLGEEEQYLAV 371
QG L+ + D L L++ E +KK L+ R+ G+ I + F + + +A
Sbjct: 338 RGQGPERLVSGSDDFTLFLWSPAE--DKKP---LA-RMTGHQALINQVVF-SPDSRVIAS 390
Query: 372 ATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESR 431
A+ + ++++D + L GH V + A S+ L+V+GS D+++++WD +++
Sbjct: 391 ASFDKSIKLWDGRTGKYLASLRGH---VAAVYQIAWSADSRLLVSGSSDSTLKVWDVKAQ 447
Query: 432 CCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVW 469
GH V AV +S Q + SG D +++W
Sbjct: 448 KLSTDLPGHADEVYAVDWSPDGQR-VASGGKDKCLRIW 484
Score = 183 (69.5 bits), Expect = 5.8e-20, Sum P(2) = 5.8e-20
Identities = 59/200 (29%), Positives = 93/200 (46%)
Query: 28 SSDGSFIACACGES-INIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRV 86
S G ++A G++ + DLS + T +G + +++ SPD K L S + +I +
Sbjct: 124 SPTGKYLASGSGDTTVRFWDLSTETPHFTCQGHRHWVLSISWSPDGKKLASGCKNGQILL 183
Query: 87 WDLSTLKCL-RSWKGHDG--PAIG---MACHPSGGLLATAGADRKVLVWDVDGGFCTHYF 140
WD ST K + R+ GH A+ + +P +A++ D V VWD G C
Sbjct: 184 WDPSTGKQVGRALTGHSKWITALSWEPLHANPECRYVASSSKDGSVRVWDTTAGRCERTL 243
Query: 141 KGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDG 200
GH V+ + + D LL+S S D T++VW TL H V +MA+++D
Sbjct: 244 TGHAQSVTCLRWGGD---GLLYSASQDRTIKVWRAHDGVLCRTLQGHGHWVNTMALSTDY 300
Query: 201 STLISAGR--DKVVNLWDLR 218
+ A + VN DLR
Sbjct: 301 ALRTGAFEPAEASVNAQDLR 320
Score = 167 (63.8 bits), Expect = 5.4e-09, P = 5.4e-09
Identities = 47/176 (26%), Positives = 77/176 (43%)
Query: 41 SINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWD-LSTLKCLRSWK 99
S+N DL S++ E + ++L+ S + +W K L
Sbjct: 313 SVNAQDL-RGSLQELKERALSRYNLVRGQGPERLV-SGSDDFTLFLWSPAEDKKPLARMT 370
Query: 100 GHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKS 159
GH + P ++A+A D+ + +WD G +GH V I + D
Sbjct: 371 GHQALINQVVFSPDSRVIASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAW--SADSR 428
Query: 160 LLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLW 215
LL SGS D+T++VWD+ A+K L H V ++ + DG + S G+DK + +W
Sbjct: 429 LLVSGSSDSTLKVWDVKAQKLSTDLPGHADEVYAVDWSPDGQRVASGGKDKCLRIW 484
Score = 144 (55.7 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 39/165 (23%), Positives = 69/165 (41%)
Query: 493 HGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVI 552
H + + S+A +P + +GS D T W L T +GH+ + S+ +SP + +
Sbjct: 114 HSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHFTCQGHRHWVLSISWSPDGKKLA 173
Query: 553 TASGDKTIKIWSISDGSCL-KTFEGHTSSVLRASFLTRGAQ-----IVSCGADGLVKLWT 606
+ + I +W S G + + GH+ + S+ A + S DG V++W
Sbjct: 174 SGCKNGQILLWDPSTGKQVGRALTGHSKWITALSWEPLHANPECRYVASSSKDGSVRVWD 233
Query: 607 VRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLW--HD 649
G C T H + L G +++ D + +W HD
Sbjct: 234 TTAGRCERTLTGHAQSVTCLRWGGDGLLYSAS-QDRTIKVWRAHD 277
Score = 134 (52.2 bits), Expect = 5.8e-20, Sum P(2) = 5.8e-20
Identities = 37/131 (28%), Positives = 62/131 (47%)
Query: 392 LAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSK 451
+ GH ++ + S +I + S D S++LWD + + GH+ AV +A+S
Sbjct: 369 MTGHQALI---NQVVFSPDSRVIASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSA 425
Query: 452 KLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCT 511
LVSGSSD T+KVW D Q K + H ++ ++ +P+ V +
Sbjct: 426 D-SRLLVSGSSDSTLKVW------DVKAQ----KLSTDLPGHADEVYAVDWSPDGQRVAS 474
Query: 512 GSQDRTACVWR 522
G +D+ +WR
Sbjct: 475 GGKDKCLRIWR 485
Score = 134 (52.2 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 36/127 (28%), Positives = 58/127 (45%)
Query: 531 TFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRG 590
+ GH + SV FSP + + + SGD T++ W +S + T +GH VL S+ G
Sbjct: 110 SLEGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHFTCQGHRHWVLSISWSPDG 169
Query: 591 AQIVSCGADGLVKLWTVRTGECIA-TYDKHEDKIWALA-----VGKKTEMFATGGSDALV 644
++ S +G + LW TG+ + H I AL+ + A+ D V
Sbjct: 170 KKLASGCKNGQILLWDPSTGKQVGRALTGHSKWITALSWEPLHANPECRYVASSSKDGSV 229
Query: 645 NLWHDST 651
+W D+T
Sbjct: 230 RVW-DTT 235
>UNIPROTKB|E1BVN5 [details] [associations]
symbol:PLRG1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013
CTD:5356 GeneTree:ENSGT00700000104496 KO:K12862 OMA:ITAEADK
EMBL:AADN02016546 IPI:IPI00576149 RefSeq:XP_420368.2
UniGene:Gga.9982 ProteinModelPortal:E1BVN5
Ensembl:ENSGALT00000015067 GeneID:422401 KEGG:gga:422401
NextBio:20825038 Uniprot:E1BVN5
Length = 516
Score = 235 (87.8 bits), Expect = 5.9e-20, Sum P(2) = 5.9e-20
Identities = 52/187 (27%), Positives = 86/187 (45%)
Query: 33 FIACACGESINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTL 92
F+ + +I I DL++ +K ++ G T+ + +S LFS G ++++ WDL
Sbjct: 221 FVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVIVSARSPYLFSCGEDKQVKCWDLEYN 280
Query: 93 KCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILF 152
K +R + GH G+ HP+ +L T D +WDV H GH V+++
Sbjct: 281 KVIRHYHGHLSAVYGLDLHPTIDVLVTCSRDSTARIWDVRTKASVHTLSGHTNAVATVKC 340
Query: 153 HPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVV 212
+ + +GS D T+R+WDL+A K TL H V ++ + T S D +
Sbjct: 341 QAAEPQ--VVTGSHDTTIRLWDLVAGKTRVTLTNHKKSVRAVILHPRHYTFASGSPDNIK 398
Query: 213 NLWDLRD 219
W D
Sbjct: 399 Q-WKFPD 404
Score = 221 (82.9 bits), Expect = 7.1e-15, P = 7.1e-15
Identities = 73/259 (28%), Positives = 109/259 (42%)
Query: 391 VLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFS 450
V++GH V C+ A+ G VTGS D ++++WD S TGH+ V V S
Sbjct: 201 VISGHLGWVRCI---AVEPGNQWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVIVS 257
Query: 451 KKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHG--KDINSLAVAPNDSL 508
+ +L S D +K W D E N K + HG + L + P +
Sbjct: 258 AR-SPYLFSCGEDKQVKCW-------DLEY--N---KVIRHYHGHLSAVYGLDLHPTIDV 304
Query: 509 VCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDG 568
+ T S+D TA +W + SV T GH + +V+ + V+T S D TI++W + G
Sbjct: 305 LVTCSRDSTARIWDVRTKASVHTLSGHTNAVATVKCQAAEPQVVTGSHDTTIRLWDLVAG 364
Query: 569 SCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAV 628
T H SV RA L + G+ +K W G I H I L V
Sbjct: 365 KTRVTLTNHKKSV-RAVILHPRHYTFASGSPDNIKQWKFPDGNFIQNLSGHNAIINTLTV 423
Query: 629 GKKTEMFATGGSDALVNLW 647
+ +G + ++LW
Sbjct: 424 NSDG-VLVSGADNGTMHLW 441
Score = 211 (79.3 bits), Expect = 3.0e-17, Sum P(2) = 3.0e-17
Identities = 51/192 (26%), Positives = 88/192 (45%)
Query: 56 IEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPSGG 115
I G + +A+ P ++ + R I++WDL++ K S GH G+
Sbjct: 202 ISGHLGWVRCIAVEPGNQWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVIVSARSP 261
Query: 116 LLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDL 175
L + G D++V WD++ ++ GH V + HP D +L + S D+T R+WD+
Sbjct: 262 YLFSCGEDKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTID--VLVTCSRDSTARIWDV 319
Query: 176 LAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYEM-VEA 234
K V TL H + V ++ + +++ D + LWDL ++T+ ++ V A
Sbjct: 320 RTKASVHTLSGHTNAVATVKCQAAEPQVVTGSHDTTIRLWDLVAGKTRVTLTNHKKSVRA 379
Query: 235 VCAIPPGSAFDS 246
V P F S
Sbjct: 380 VILHPRHYTFAS 391
Score = 182 (69.1 bits), Expect = 1.4e-10, P = 1.4e-10
Identities = 64/246 (26%), Positives = 105/246 (42%)
Query: 367 QYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLW 426
Q+ + ++++DL+S L GH V + A S L G +D V+ W
Sbjct: 219 QWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVIVSARSP--YLFSCG-EDKQVKCW 275
Query: 427 DSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKA 486
D E + GH+ AV + + + LV+ S D T ++W + KA
Sbjct: 276 DLEYNKVIRHYHGHLSAVYGLDLHPTI-DVLVTCSRDSTARIWD-----------VRTKA 323
Query: 487 KA-VVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFS 545
++ H + ++ + V TGS D T +W L + VT HK+ + +V
Sbjct: 324 SVHTLSGHTNAVATVKCQAAEPQVVTGSHDTTIRLWDLVAGKTRVTLTNHKKSVRAVILH 383
Query: 546 PVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGAD-GLVKL 604
P + S D IK W DG+ ++ GH ++++ + +VS GAD G + L
Sbjct: 384 PRHYTFASGSPDN-IKQWKFPDGNFIQNLSGH-NAIINTLTVNSDGVLVS-GADNGTMHL 440
Query: 605 WTVRTG 610
W RTG
Sbjct: 441 WDWRTG 446
Score = 176 (67.0 bits), Expect = 6.2e-10, P = 6.2e-10
Identities = 55/225 (24%), Positives = 95/225 (42%)
Query: 25 LVVSSDGSFIACACGES--INIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSR 82
++VS+ ++ +CGE + DL + G + L L P +L +
Sbjct: 254 VIVSARSPYLF-SCGEDKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTIDVLVTCSRDS 312
Query: 83 EIRVWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKG 142
R+WD+ T + + GH + C + + T D + +WD+ G
Sbjct: 313 TARIWDVRTKASVHTLSGHTNAVATVKCQAAEPQVVTGSHDTTIRLWDLVAGKTRVTLTN 372
Query: 143 HKGVVSSILFHPDTDKSLLF-SGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGS 201
HK V +++ HP + F SGS D ++ W + L H + + ++ + SDG
Sbjct: 373 HKKSVRAVILHP---RHYTFASGSPD-NIKQWKFPDGNFIQNLSGHNAIINTLTVNSDG- 427
Query: 202 TLISAGRDKVVNLWDLRDYSCKLTVPTYEMVEAVCAIPPGSAFDS 246
L+S + ++LWD R T ++ V A A+ PGS DS
Sbjct: 428 VLVSGADNGTMHLWDWR------TGYNFQRVHA--AVQPGS-LDS 463
Score = 175 (66.7 bits), Expect = 8.0e-10, P = 8.0e-10
Identities = 40/163 (24%), Positives = 66/163 (40%)
Query: 485 KAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEF 544
K V++ H + +AV P + TGS DRT +W L ++ GH + V
Sbjct: 197 KLYRVISGHLGWVRCIAVEPGNQWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVIV 256
Query: 545 SPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKL 604
S + + DK +K W + ++ + GH S+V +V+C D ++
Sbjct: 257 SARSPYLFSCGEDKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTIDVLVTCSRDSTARI 316
Query: 605 WTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLW 647
W VRT + T H + + + TG D + LW
Sbjct: 317 WDVRTKASVHTLSGHTNAVATVKCQAAEPQVVTGSHDTTIRLW 359
Score = 162 (62.1 bits), Expect = 2.1e-08, P = 2.1e-08
Identities = 61/257 (23%), Positives = 115/257 (44%)
Query: 312 VLPSNQGLLCVTADQQLLLYTTVEVPEKKMELILSKRLVGYNEEILDLKFLGEEEQYLAV 371
V P NQ + +AD+ + ++ ++ K++L L+ G+ + + + YL
Sbjct: 214 VEPGNQWFVTGSADRTIKIW---DLASGKLKLSLT----GHISTVRGV-IVSARSPYLFS 265
Query: 372 ATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESR 431
+QV+ +DL GH V LD L ++VT S+D++ R+WD ++
Sbjct: 266 CGEDKQVKCWDLEYNKVIRHYHGHLSAVYGLD---LHPTIDVLVTCSRDSTARIWDVRTK 322
Query: 432 CCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVA 491
V +GH AV V + + +V+GS D TI++W D ++ K + +
Sbjct: 323 ASVHTLSGHTNAVATVK-CQAAEPQVVTGSHDTTIRLW--DLVAG--------KTRVTLT 371
Query: 492 AHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVV 551
H K + ++ + P +GS D W+ PD + GH I ++ + D V+
Sbjct: 372 NHKKSVRAVILHPRHYTFASGSPDNIK-QWKFPDGNFIQNLSGHNAIINTLTVNS-DGVL 429
Query: 552 ITASGDKTIKIWSISDG 568
++ + + T+ +W G
Sbjct: 430 VSGADNGTMHLWDWRTG 446
Score = 146 (56.5 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 57/213 (26%), Positives = 96/213 (45%)
Query: 369 LAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDS 428
L + +++D+ + + + L+GH+ V + C + ++ VTGS D ++RLWD
Sbjct: 305 LVTCSRDSTARIWDVRTKASVHTLSGHTNAVATVK-CQAAEPQV--VTGSHDTTIRLWDL 361
Query: 429 ESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKA 488
+ T H +V AV + F SGS D+ IK W F D NL
Sbjct: 362 VAGKTRVTLTNHKKSVRAVILHPRHYTF-ASGSPDN-IKQWKFP----DGNFIQNL---- 411
Query: 489 VVAAHGKDINSLAVAPNDSLVCTGSQDRTACVW--RLP---DLVSVVTFRGH---KRGIW 540
+ H IN+L V +D ++ +G+ + T +W R V G + GI+
Sbjct: 412 --SGHNAIINTLTVN-SDGVLVSGADNGTMHLWDWRTGYNFQRVHAAVQPGSLDSESGIF 468
Query: 541 SVEFSPVDQVVITASGDKTIKIWSISDGSCLKT 573
+ F + ++TA DKTIK++ D + +T
Sbjct: 469 ACVFDQSESRLLTAEADKTIKVYKEDDTATEET 501
Score = 144 (55.7 bits), Expect = 7.5e-10, Sum P(2) = 7.5e-10
Identities = 41/165 (24%), Positives = 65/165 (39%)
Query: 93 KCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILF 152
K R GH G +A P T ADR + +WD+ G GH V ++
Sbjct: 197 KLYRVISGHLGWVRCIAVEPGNQWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVIV 256
Query: 153 HPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVV 212
LFS +D V+ WDL K + H S V + + L++ RD
Sbjct: 257 --SARSPYLFSCGEDKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTIDVLVTCSRDSTA 314
Query: 213 NLWDLRDYSCKLTVPTYEMVEAVCAIPPGSAFDSFLSSYNQQTIK 257
+WD+R + T+ + AV + +A ++ + TI+
Sbjct: 315 RIWDVRTKASVHTLSGH--TNAVATVKCQAAEPQVVTGSHDTTIR 357
Score = 79 (32.9 bits), Expect = 5.9e-20, Sum P(2) = 5.9e-20
Identities = 26/106 (24%), Positives = 55/106 (51%)
Query: 392 LAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSES-----RCCVGVGTGHMGA--- 443
L+GH+ I+ +T ++S +L V+G+ + ++ LWD + R V G + +
Sbjct: 411 LSGHNAII---NTLTVNSDGVL-VSGADNGTMHLWDWRTGYNFQRVHAAVQPGSLDSESG 466
Query: 444 VGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAV 489
+ A F + ++ L++ +D TIKV+ D + + P++ K + +
Sbjct: 467 IFACVFDQS-ESRLLTAEADKTIKVYKEDDTATEETHPISWKPEII 511
>UNIPROTKB|Q292E8 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:46245 "Drosophila pseudoobscura
pseudoobscura" [GO:0016226 "iron-sulfur cluster assembly"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016226 EMBL:CM000071 GenomeReviews:CM000071_GR OMA:SWKCVCT
OrthoDB:EOG45DV4X HSSP:P63005 RefSeq:XP_001360339.1
ProteinModelPortal:Q292E8 GeneID:4803656 KEGG:dpo:Dpse_GA11817
FlyBase:FBgn0071866 InParanoid:Q292E8 Uniprot:Q292E8
Length = 335
Score = 207 (77.9 bits), Expect = 6.2e-20, Sum P(2) = 6.2e-20
Identities = 60/196 (30%), Positives = 93/196 (47%)
Query: 34 IACACGE--SINIVDLS-NASIKSTI--EGGSDTITALALSPDDKLLFSSGHSREIRVWD 88
+ +CGE +I + LS N TI +G TI + SP + L S+ +W
Sbjct: 28 VFASCGEDKAIRVWSLSGNTWSTKTILSDGHKRTIREIRWSPCGQYLASASFDATTAIWS 87
Query: 89 LST--LKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGG--F-CTHYFKGH 143
S+ +C + +GH+ ++ SGGLLAT D+ V +W+V G F C H
Sbjct: 88 KSSGEFECNATLEGHENEVKSVSWSRSGGLLATCSRDKSVWIWEVAGDDEFECAAVLNAH 147
Query: 144 KGVVSSILFHPDTDKSLLFSGSDDATVRVW--DLLAKK--CVATLDKHFSRVTSMAITSD 199
V +++HP D +L S S D T++++ L C ATL H S V S+ ++
Sbjct: 148 TQDVKRVVWHPTKD--ILASASYDNTIKMFAESQLDSDWDCTATLSSHTSTVWSIDFDAE 205
Query: 200 GSTLISAGRDKVVNLW 215
G L+S DK + +W
Sbjct: 206 GDRLVSCSDDKTLKIW 221
Score = 181 (68.8 bits), Expect = 5.8e-11, P = 5.8e-11
Identities = 58/228 (25%), Positives = 98/228 (42%)
Query: 410 GKILIVTGSKDNSVRLWDSESRCCVG---VGTGHMGAVGAVAFSKKLQNFLVSGSSDHTI 466
G + G +D ++R+W + GH + + +S Q +L S S D T
Sbjct: 26 GNVFASCG-EDKAIRVWSLSGNTWSTKTILSDGHKRTIREIRWSPCGQ-YLASASFDATT 83
Query: 467 KVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLP-- 524
+WS E N A + H ++ S++ + + L+ T S+D++ +W +
Sbjct: 84 AIWS----KSSGEFECN----ATLEGHENEVKSVSWSRSGGLLATCSRDKSVWIWEVAGD 135
Query: 525 -DLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSIS----DGSCLKTFEGHTS 579
+ H + + V + P ++ +AS D TIK+++ S D C T HTS
Sbjct: 136 DEFECAAVLNAHTQDVKRVVWHPTKDILASASYDNTIKMFAESQLDSDWDCTATLSSHTS 195
Query: 580 SVLRASFLTRGAQIVSCGADGLVKLWTV-RTGEC--IATYDKHEDKIW 624
+V F G ++VSC D +K+W G IAT DK +W
Sbjct: 196 TVWSIDFDAEGDRLVSCSDDKTLKIWRAYHPGNDAGIATPDKQS--VW 241
Score = 170 (64.9 bits), Expect = 1.0e-09, P = 1.0e-09
Identities = 49/219 (22%), Positives = 87/219 (39%)
Query: 439 GHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVA-AHGKDI 497
GH G + VA+ K N S D I+VWS G + K +++ H + I
Sbjct: 12 GHKGRIWGVAWHPK-GNVFASCGEDKAIRVWSLSGNT--------WSTKTILSDGHKRTI 62
Query: 498 NSLAVAPNDSLVCTGSQDRTACVWRLP--DLVSVVTFRGHKRGIWSVEFSPVDQVVITAS 555
+ +P + + S D T +W + T GH+ + SV +S ++ T S
Sbjct: 63 REIRWSPCGQYLASASFDATTAIWSKSSGEFECNATLEGHENEVKSVSWSRSGGLLATCS 122
Query: 556 GDKTIKIWSIS---DGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRT--- 609
DK++ IW ++ + C HT V R + + S D +K++
Sbjct: 123 RDKSVWIWEVAGDDEFECAAVLNAHTQDVKRVVWHPTKDILASASYDNTIKMFAESQLDS 182
Query: 610 -GECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLW 647
+C AT H +W++ + + + D + +W
Sbjct: 183 DWDCTATLSSHTSTVWSIDFDAEGDRLVSCSDDKTLKIW 221
Score = 169 (64.5 bits), Expect = 2.6e-15, Sum P(2) = 2.6e-15
Identities = 51/168 (30%), Positives = 79/168 (47%)
Query: 99 KGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFC---THYFKGHKGVVSSILFHPD 155
+GH G G+A HP G + A+ G D+ + VW + G T GHK + I + P
Sbjct: 11 QGHKGRIWGVAWHPKGNVFASCGEDKAIRVWSLSGNTWSTKTILSDGHKRTIREIRWSPC 70
Query: 156 TDKSLLFSGSDDATVRVWDLLAKK--CVATLDKHFSRVTSMAITSDGSTLISAGRDKVVN 213
L S S DAT +W + + C ATL+ H + V S++ + G L + RDK V
Sbjct: 71 GQ--YLASASFDATTAIWSKSSGEFECNATLEGHENEVKSVSWSRSGGLLATCSRDKSVW 128
Query: 214 LWDLR---DYSCKLTVPTYEM-VEAVCAIPPGSAFDSFLSSYNQQTIK 257
+W++ ++ C + + V+ V P S +SY+ TIK
Sbjct: 129 IWEVAGDDEFECAAVLNAHTQDVKRVVWHPTKDILAS--ASYDN-TIK 173
Score = 156 (60.0 bits), Expect = 3.8e-08, P = 3.8e-08
Identities = 35/122 (28%), Positives = 60/122 (49%)
Query: 531 TFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGS-CLKTF--EGHTSSVLRASFL 587
T +GHK IW V + P V + DK I++WS+S + KT +GH ++ +
Sbjct: 9 TLQGHKGRIWGVAWHPKGNVFASCGEDKAIRVWSLSGNTWSTKTILSDGHKRTIREIRWS 68
Query: 588 TRGAQIVSCGADGLVKLWTVRTGE--CIATYDKHEDKIWALAVGKKTEMFATGGSDALVN 645
G + S D +W+ +GE C AT + HE+++ +++ + + AT D V
Sbjct: 69 PCGQYLASASFDATTAIWSKSSGEFECNATLEGHENEVKSVSWSRSGGLLATCSRDKSVW 128
Query: 646 LW 647
+W
Sbjct: 129 IW 130
Score = 97 (39.2 bits), Expect = 6.2e-20, Sum P(2) = 6.2e-20
Identities = 48/159 (30%), Positives = 69/159 (43%)
Query: 462 SDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSL-AVAP-NDSLVCTGSQDRTAC 519
S HT VWS D DAE + V + K + A P ND+ + T D+ +
Sbjct: 191 SSHTSTVWSIDF---DAEGD-----RLVSCSDDKTLKIWRAYHPGNDAGIAT--PDKQS- 239
Query: 520 VWRLPDLVSVVTFRG-HKRGIWSVEFSPVDQVVITASGDKTIKIWS-ISDGSCLK-TFE- 575
VW+ V T G H R I+ V + + ++ T GD I+I+ SD + TFE
Sbjct: 240 VWKC-----VCTLSGQHSRAIYDVSWCKLTGLIATGCGDDGIRIFKETSDSKRDEPTFEQ 294
Query: 576 ------GHTSSVLRASFLTRGA-QIVSCGADGLVKLWTV 607
H V + A Q++SC DG +K+W V
Sbjct: 295 LTAEETAHEQDVNAVEWNPAVAGQLISCSDDGTIKIWKV 333
Score = 91 (37.1 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 26/99 (26%), Positives = 43/99 (43%)
Query: 138 HYFKGHKGVVSSILFHPDTDKSLLFSG-SDDATVRVWDLLAKK-CVATL--DKHFSRVTS 193
H +GHKG + + +HP K +F+ +D +RVW L T+ D H +
Sbjct: 8 HTLQGHKGRIWGVAWHP---KGNVFASCGEDKAIRVWSLSGNTWSTKTILSDGHKRTIRE 64
Query: 194 MAITSDGSTLISAGRDKVVNLWDLR--DYSCKLTVPTYE 230
+ + G L SA D +W ++ C T+ +E
Sbjct: 65 IRWSPCGQYLASASFDATTAIWSKSSGEFECNATLEGHE 103
Score = 88 (36.0 bits), Expect = 2.2e-14, Sum P(2) = 2.2e-14
Identities = 27/102 (26%), Positives = 46/102 (45%)
Query: 566 SDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWT---------VRTGE----- 611
SD C T HTS+V F G ++VSC D +K+W + T +
Sbjct: 182 SDWDCTATLSSHTSTVWSIDFDAEGDRLVSCSDDKTLKIWRAYHPGNDAGIATPDKQSVW 241
Query: 612 -CIATYD-KHEDKIWALAVGKKTEMFATGGSDALVNLWHDST 651
C+ T +H I+ ++ K T + ATG D + ++ +++
Sbjct: 242 KCVCTLSGQHSRAIYDVSWCKLTGLIATGCGDDGIRIFKETS 283
Score = 87 (35.7 bits), Expect = 2.8e-14, Sum P(2) = 2.8e-14
Identities = 38/151 (25%), Positives = 65/151 (43%)
Query: 433 CVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDA-----EQPMNLKAK 487
C + H V ++ F + LVS S D T+K+W +DA ++ K
Sbjct: 186 CTATLSSHTSTVWSIDFDAEGDR-LVSCSDDKTLKIWRAYHPGNDAGIATPDKQSVWKCV 244
Query: 488 AVVAA-HGKDINSLAVAPNDSLVCTGSQDRTACVWR-LPDLV-SVVTFR-------GHKR 537
++ H + I ++ L+ TG D +++ D TF H++
Sbjct: 245 CTLSGQHSRAIYDVSWCKLTGLIATGCGDDGIRIFKETSDSKRDEPTFEQLTAEETAHEQ 304
Query: 538 GIWSVEFSP-VDQVVITASGDKTIKIWSISD 567
+ +VE++P V +I+ S D TIKIW + D
Sbjct: 305 DVNAVEWNPAVAGQLISCSDDGTIKIWKVDD 335
Score = 86 (35.3 bits), Expect = 8.7e-19, Sum P(2) = 8.7e-19
Identities = 30/99 (30%), Positives = 45/99 (45%)
Query: 384 SSMSCSYVLAG-HSEIVLCLDTCALSSGKILIVTGSKDNSVRLWD--SESRC-------C 433
S C L+G HS + + C L+ LI TG D+ +R++ S+S+
Sbjct: 239 SVWKCVCTLSGQHSRAIYDVSWCKLTG---LIATGCGDDGIRIFKETSDSKRDEPTFEQL 295
Query: 434 VGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFD 472
T H V AV ++ + L+S S D TIK+W D
Sbjct: 296 TAEETAHEQDVNAVEWNPAVAGQLISCSDDGTIKIWKVD 334
>UNIPROTKB|B4GDM7 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7234 "Drosophila persimilis"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016226
EMBL:CH479181 OrthoDB:EOG45DV4X RefSeq:XP_002015794.1
ProteinModelPortal:B4GDM7 GeneID:6591258 KEGG:dpe:Dper_GL10827
FlyBase:FBgn0148437 Uniprot:B4GDM7
Length = 335
Score = 207 (77.9 bits), Expect = 6.2e-20, Sum P(2) = 6.2e-20
Identities = 60/196 (30%), Positives = 93/196 (47%)
Query: 34 IACACGE--SINIVDLS-NASIKSTI--EGGSDTITALALSPDDKLLFSSGHSREIRVWD 88
+ +CGE +I + LS N TI +G TI + SP + L S+ +W
Sbjct: 28 VFASCGEDKAIRVWSLSGNTWSTKTILSDGHKRTIREIRWSPCGQYLASASFDATTAIWS 87
Query: 89 LST--LKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGG--F-CTHYFKGH 143
S+ +C + +GH+ ++ SGGLLAT D+ V +W+V G F C H
Sbjct: 88 KSSGEFECNATLEGHENEVKSVSWSRSGGLLATCSRDKSVWIWEVAGDDEFECAAVLNAH 147
Query: 144 KGVVSSILFHPDTDKSLLFSGSDDATVRVW--DLLAKK--CVATLDKHFSRVTSMAITSD 199
V +++HP D +L S S D T++++ L C ATL H S V S+ ++
Sbjct: 148 TQDVKRVVWHPTKD--ILASASYDNTIKMFAESQLDSDWDCTATLSSHTSTVWSIDFDAE 205
Query: 200 GSTLISAGRDKVVNLW 215
G L+S DK + +W
Sbjct: 206 GDRLVSCSDDKTLKIW 221
Score = 181 (68.8 bits), Expect = 5.8e-11, P = 5.8e-11
Identities = 58/228 (25%), Positives = 98/228 (42%)
Query: 410 GKILIVTGSKDNSVRLWDSESRCCVG---VGTGHMGAVGAVAFSKKLQNFLVSGSSDHTI 466
G + G +D ++R+W + GH + + +S Q +L S S D T
Sbjct: 26 GNVFASCG-EDKAIRVWSLSGNTWSTKTILSDGHKRTIREIRWSPCGQ-YLASASFDATT 83
Query: 467 KVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLP-- 524
+WS E N A + H ++ S++ + + L+ T S+D++ +W +
Sbjct: 84 AIWS----KSSGEFECN----ATLEGHENEVKSVSWSRSGGLLATCSRDKSVWIWEVAGD 135
Query: 525 -DLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSIS----DGSCLKTFEGHTS 579
+ H + + V + P ++ +AS D TIK+++ S D C T HTS
Sbjct: 136 DEFECAAVLNAHTQDVKRVVWHPTKDILASASYDNTIKMFAESQLDSDWDCTATLSSHTS 195
Query: 580 SVLRASFLTRGAQIVSCGADGLVKLWTV-RTGEC--IATYDKHEDKIW 624
+V F G ++VSC D +K+W G IAT DK +W
Sbjct: 196 TVWSIDFDAEGDRLVSCSDDKTLKIWRAYHPGNDAGIATPDKQS--VW 241
Score = 170 (64.9 bits), Expect = 1.0e-09, P = 1.0e-09
Identities = 49/219 (22%), Positives = 87/219 (39%)
Query: 439 GHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVA-AHGKDI 497
GH G + VA+ K N S D I+VWS G + K +++ H + I
Sbjct: 12 GHKGRIWGVAWHPK-GNVFASCGEDKAIRVWSLSGNT--------WSTKTILSDGHKRTI 62
Query: 498 NSLAVAPNDSLVCTGSQDRTACVWRLP--DLVSVVTFRGHKRGIWSVEFSPVDQVVITAS 555
+ +P + + S D T +W + T GH+ + SV +S ++ T S
Sbjct: 63 REIRWSPCGQYLASASFDATTAIWSKSSGEFECNATLEGHENEVKSVSWSRSGGLLATCS 122
Query: 556 GDKTIKIWSIS---DGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRT--- 609
DK++ IW ++ + C HT V R + + S D +K++
Sbjct: 123 RDKSVWIWEVAGDDEFECAAVLNAHTQDVKRVVWHPTKDILASASYDNTIKMFAESQLDS 182
Query: 610 -GECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLW 647
+C AT H +W++ + + + D + +W
Sbjct: 183 DWDCTATLSSHTSTVWSIDFDAEGDRLVSCSDDKTLKIW 221
Score = 169 (64.5 bits), Expect = 2.6e-15, Sum P(2) = 2.6e-15
Identities = 51/168 (30%), Positives = 79/168 (47%)
Query: 99 KGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFC---THYFKGHKGVVSSILFHPD 155
+GH G G+A HP G + A+ G D+ + VW + G T GHK + I + P
Sbjct: 11 QGHKGRIWGVAWHPKGNVFASCGEDKAIRVWSLSGNTWSTKTILSDGHKRTIREIRWSPC 70
Query: 156 TDKSLLFSGSDDATVRVWDLLAKK--CVATLDKHFSRVTSMAITSDGSTLISAGRDKVVN 213
L S S DAT +W + + C ATL+ H + V S++ + G L + RDK V
Sbjct: 71 GQ--YLASASFDATTAIWSKSSGEFECNATLEGHENEVKSVSWSRSGGLLATCSRDKSVW 128
Query: 214 LWDLR---DYSCKLTVPTYEM-VEAVCAIPPGSAFDSFLSSYNQQTIK 257
+W++ ++ C + + V+ V P S +SY+ TIK
Sbjct: 129 IWEVAGDDEFECAAVLNAHTQDVKRVVWHPTKDILAS--ASYDN-TIK 173
Score = 156 (60.0 bits), Expect = 3.8e-08, P = 3.8e-08
Identities = 35/122 (28%), Positives = 60/122 (49%)
Query: 531 TFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGS-CLKTF--EGHTSSVLRASFL 587
T +GHK IW V + P V + DK I++WS+S + KT +GH ++ +
Sbjct: 9 TLQGHKGRIWGVAWHPKGNVFASCGEDKAIRVWSLSGNTWSTKTILSDGHKRTIREIRWS 68
Query: 588 TRGAQIVSCGADGLVKLWTVRTGE--CIATYDKHEDKIWALAVGKKTEMFATGGSDALVN 645
G + S D +W+ +GE C AT + HE+++ +++ + + AT D V
Sbjct: 69 PCGQYLASASFDATTAIWSKSSGEFECNATLEGHENEVKSVSWSRSGGLLATCSRDKSVW 128
Query: 646 LW 647
+W
Sbjct: 129 IW 130
Score = 97 (39.2 bits), Expect = 6.2e-20, Sum P(2) = 6.2e-20
Identities = 48/159 (30%), Positives = 69/159 (43%)
Query: 462 SDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSL-AVAP-NDSLVCTGSQDRTAC 519
S HT VWS D DAE + V + K + A P ND+ + T D+ +
Sbjct: 191 SSHTSTVWSIDF---DAEGD-----RLVSCSDDKTLKIWRAYHPGNDAGIAT--PDKQS- 239
Query: 520 VWRLPDLVSVVTFRG-HKRGIWSVEFSPVDQVVITASGDKTIKIWS-ISDGSCLK-TFE- 575
VW+ V T G H R I+ V + + ++ T GD I+I+ SD + TFE
Sbjct: 240 VWKC-----VCTLSGQHSRAIYDVSWCKLTGLIATGCGDDGIRIFKETSDSKRDEPTFEQ 294
Query: 576 ------GHTSSVLRASFLTRGA-QIVSCGADGLVKLWTV 607
H V + A Q++SC DG +K+W V
Sbjct: 295 LTAEETAHEQDVNAVEWNPAVAGQLISCSDDGTIKIWKV 333
Score = 91 (37.1 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 26/99 (26%), Positives = 43/99 (43%)
Query: 138 HYFKGHKGVVSSILFHPDTDKSLLFSG-SDDATVRVWDLLAKK-CVATL--DKHFSRVTS 193
H +GHKG + + +HP K +F+ +D +RVW L T+ D H +
Sbjct: 8 HTLQGHKGRIWGVAWHP---KGNVFASCGEDKAIRVWSLSGNTWSTKTILSDGHKRTIRE 64
Query: 194 MAITSDGSTLISAGRDKVVNLWDLR--DYSCKLTVPTYE 230
+ + G L SA D +W ++ C T+ +E
Sbjct: 65 IRWSPCGQYLASASFDATTAIWSKSSGEFECNATLEGHE 103
Score = 88 (36.0 bits), Expect = 2.2e-14, Sum P(2) = 2.2e-14
Identities = 27/102 (26%), Positives = 46/102 (45%)
Query: 566 SDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWT---------VRTGE----- 611
SD C T HTS+V F G ++VSC D +K+W + T +
Sbjct: 182 SDWDCTATLSSHTSTVWSIDFDAEGDRLVSCSDDKTLKIWRAYHPGNDAGIATPDKQSVW 241
Query: 612 -CIATYD-KHEDKIWALAVGKKTEMFATGGSDALVNLWHDST 651
C+ T +H I+ ++ K T + ATG D + ++ +++
Sbjct: 242 KCVCTLSGQHSRAIYDVSWCKLTGLIATGCGDDGIRIFKETS 283
Score = 88 (36.0 bits), Expect = 2.2e-14, Sum P(2) = 2.2e-14
Identities = 38/151 (25%), Positives = 66/151 (43%)
Query: 433 CVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDA-----EQPMNLKAK 487
C + H V ++ F + LVS S D T+K+W +DA ++ K
Sbjct: 186 CTATLSSHTSTVWSIDFDAEGDR-LVSCSDDKTLKIWRAYHPGNDAGIATPDKQSVWKCV 244
Query: 488 AVVAA-HGKDINSLAVAPNDSLVCTGSQDRTACVWR-LPDLV-SVVTFR-------GHKR 537
++ H + I ++ L+ TG D +++ D TF H++
Sbjct: 245 CTLSGQHSRAIYDVSWCKLTGLIATGCGDDGIRIFKETSDSKRDEPTFEQLTAEETAHEQ 304
Query: 538 GIWSVEFSP-VDQVVITASGDKTIKIWSISD 567
+ +VE++P V +I+ S D TIKIW ++D
Sbjct: 305 DVNAVEWNPAVAGQLISCSDDGTIKIWKVAD 335
Score = 81 (33.6 bits), Expect = 2.9e-18, Sum P(2) = 2.9e-18
Identities = 29/96 (30%), Positives = 44/96 (45%)
Query: 384 SSMSCSYVLAG-HSEIVLCLDTCALSSGKILIVTGSKDNSVRLWD--SESRC-------C 433
S C L+G HS + + C L+ LI TG D+ +R++ S+S+
Sbjct: 239 SVWKCVCTLSGQHSRAIYDVSWCKLTG---LIATGCGDDGIRIFKETSDSKRDEPTFEQL 295
Query: 434 VGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVW 469
T H V AV ++ + L+S S D TIK+W
Sbjct: 296 TAEETAHEQDVNAVEWNPAVAGQLISCSDDGTIKIW 331
>TAIR|locus:2008159 [details] [associations]
symbol:RACK1B_AT "AT1G48630" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0022626 "cytosolic
ribosome" evidence=IDA] [GO:0048364 "root development"
evidence=IGI] [GO:0048367 "shoot system development" evidence=IGI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006417 "regulation of translation" evidence=IGI]
[GO:0009845 "seed germination" evidence=IGI] [GO:0042254 "ribosome
biogenesis" evidence=IGI] [GO:0071215 "cellular response to
abscisic acid stimulus" evidence=IEP] [GO:0001510 "RNA methylation"
evidence=RCA] [GO:0009165 "nucleotide biosynthetic process"
evidence=RCA] [GO:0009220 "pyrimidine ribonucleotide biosynthetic
process" evidence=RCA] [GO:0009664 "plant-type cell wall
organization" evidence=RCA] [GO:0042545 "cell wall modification"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0006417 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0042254 GO:GO:0048364 GO:GO:0009845 GO:GO:0004871
GO:GO:0071215 GO:GO:0048367 GO:GO:0022626 EMBL:AC073555 HSSP:P16649
HOGENOM:HOG000091643 KO:K14753 ProtClustDB:CLSN2682135
EMBL:AC074308 EMBL:AY059723 EMBL:AY091352 EMBL:AY087855 EMBL:Z26552
IPI:IPI00531991 RefSeq:NP_175296.1 UniGene:At.17343
ProteinModelPortal:Q9C4Z6 SMR:Q9C4Z6 IntAct:Q9C4Z6 STRING:Q9C4Z6
PaxDb:Q9C4Z6 PRIDE:Q9C4Z6 EnsemblPlants:AT1G48630.1 GeneID:841284
KEGG:ath:AT1G48630 GeneFarm:2979 TAIR:At1g48630 InParanoid:Q9C4Z6
OMA:NCKLRNT PhylomeDB:Q9C4Z6 Genevestigator:Q9C4Z6 Uniprot:Q9C4Z6
Length = 326
Score = 233 (87.1 bits), Expect = 6.4e-20, Sum P(3) = 6.4e-20
Identities = 58/197 (29%), Positives = 95/197 (48%)
Query: 46 DLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPA 105
D S + + G S + + LS D + S E+R+WDL+T + R + GH
Sbjct: 49 DKSYGVAQRRMTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLATGESTRRFVGHTKDV 108
Query: 106 IGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFK---GHKGVVSSILFHPDTDKSLLF 162
+ +A + +A DR + +W+ G C + GHK VS + F P+T +
Sbjct: 109 LSVAFSTDNRQIVSASRDRTIKLWNTLGE-CKYTISEADGHKEWVSCVRFSPNTLVPTIV 167
Query: 163 SGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSC 222
S S D TV+VW+L K TL H + ++A++ DGS S G+D V+ LWDL +
Sbjct: 168 SASWDKTVKVWNLQNCKLRNTLAGHSGYLNTVAVSPDGSLCASGGKDGVILLWDLAEGKK 227
Query: 223 KLTVPTYEMVEAVCAIP 239
++ ++ ++C P
Sbjct: 228 LYSLEAGSIIHSLCFSP 244
Score = 213 (80.0 bits), Expect = 8.9e-15, P = 8.9e-15
Identities = 65/229 (28%), Positives = 113/229 (49%)
Query: 392 LAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWD-SESRCCVGVG----TGHMGAVGA 446
+ H+++V + T +S +IVT S+D S+ LW ++ GV TGH V
Sbjct: 11 MCAHTDMVTAIATPVDNSD--VIVTSSRDKSIILWKLTKEDKSYGVAQRRMTGHSHFVQD 68
Query: 447 VAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPND 506
V S Q F +SGS D +++W D + ++ + H KD+ S+A + ++
Sbjct: 69 VVLSSDGQ-FALSGSWDGELRLW--DLATGESTRRF--------VGHTKDVLSVAFSTDN 117
Query: 507 SLVCTGSQDRTACVWR-LPDLVSVVTFR-GHKRGIWSVEFSPVDQV--VITASGDKTIKI 562
+ + S+DRT +W L + ++ GHK + V FSP V +++AS DKT+K+
Sbjct: 118 RQIVSASRDRTIKLWNTLGECKYTISEADGHKEWVSCVRFSPNTLVPTIVSASWDKTVKV 177
Query: 563 WSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGE 611
W++ + T GH+ + + G+ S G DG++ LW + G+
Sbjct: 178 WNLQNCKLRNTLAGHSGYLNTVAVSPDGSLCASGGKDGVILLWDLAEGK 226
Score = 195 (73.7 bits), Expect = 1.2e-12, P = 1.2e-12
Identities = 59/218 (27%), Positives = 98/218 (44%)
Query: 435 GVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHG 494
G H V A+A + +V+ S D +I +W +D + A+ + H
Sbjct: 9 GTMCAHTDMVTAIATPVDNSDVIVTSSRDKSIILWKLT--KEDKSYGV---AQRRMTGHS 63
Query: 495 KDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITA 554
+ + ++ + +GS D +W L S F GH + + SV FS ++ +++A
Sbjct: 64 HFVQDVVLSSDGQFALSGSWDGELRLWDLATGESTRRFVGHTKDVLSVAFSTDNRQIVSA 123
Query: 555 SGDKTIKIWSISDGSCLKTF---EGHTS--SVLRASFLTRGAQIVSCGADGLVKLWTVRT 609
S D+TIK+W+ G C T +GH S +R S T IVS D VK+W ++
Sbjct: 124 SRDRTIKLWNTL-GECKYTISEADGHKEWVSCVRFSPNTLVPTIVSASWDKTVKVWNLQN 182
Query: 610 GECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLW 647
+ T H + +AV + A+GG D ++ LW
Sbjct: 183 CKLRNTLAGHSGYLNTVAVSPDGSLCASGGKDGVILLW 220
Score = 183 (69.5 bits), Expect = 3.1e-11, P = 3.1e-11
Identities = 49/176 (27%), Positives = 80/176 (45%)
Query: 484 LKAKAVVAAHGKDINSLAV-APNDSLVCTGSQDRTACVWRLP--DLVSVVTFR---GHKR 537
L K + AH + ++A N ++ T S+D++ +W+L D V R GH
Sbjct: 5 LVLKGTMCAHTDMVTAIATPVDNSDVIVTSSRDKSIILWKLTKEDKSYGVAQRRMTGHSH 64
Query: 538 GIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCG 597
+ V S Q ++ S D +++W ++ G + F GHT VL +F T QIVS
Sbjct: 65 FVQDVVLSSDGQFALSGSWDGELRLWDLATGESTRRFVGHTKDVLSVAFSTDNRQIVSAS 124
Query: 598 ADGLVKLWTVRTGEC---IATYDKHEDKIWALAVGKKTEM--FATGGSDALVNLWH 648
D +KLW GEC I+ D H++ + + T + + D V +W+
Sbjct: 125 RDRTIKLWNT-LGECKYTISEADGHKEWVSCVRFSPNTLVPTIVSASWDKTVKVWN 179
Score = 167 (63.8 bits), Expect = 4.7e-10, Sum P(3) = 4.7e-10
Identities = 55/203 (27%), Positives = 95/203 (46%)
Query: 52 IKSTIEGGSDTITALALSPDDK-LLFSSGHSREIRVW-----DLSTLKCLRSWKGHDGPA 105
+K T+ +D +TA+A D+ ++ +S + I +W D S R GH
Sbjct: 7 LKGTMCAHTDMVTAIATPVDNSDVIVTSSRDKSIILWKLTKEDKSYGVAQRRMTGHSHFV 66
Query: 106 IGMACHPSGGLLATAGA-DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSG 164
+ S G A +G+ D ++ +WD+ G T F GH V S+ F TD + S
Sbjct: 67 QDVVLS-SDGQFALSGSWDGELRLWDLATGESTRRFVGHTKDVLSVAF--STDNRQIVSA 123
Query: 165 SDDATVRVWDLLA--KKCVATLDKHFSRVTSMAITSDG--STLISAGRDKVVNLWDLRDY 220
S D T+++W+ L K ++ D H V+ + + + T++SA DK V +W+L++
Sbjct: 124 SRDRTIKLWNTLGECKYTISEADGHKEWVSCVRFSPNTLVPTIVSASWDKTVKVWNLQNC 183
Query: 221 SCKLTVPTYE-MVEAVCAIPPGS 242
+ T+ + + V P GS
Sbjct: 184 KLRNTLAGHSGYLNTVAVSPDGS 206
Score = 162 (62.1 bits), Expect = 1.9e-09, Sum P(3) = 1.9e-09
Identities = 51/204 (25%), Positives = 97/204 (47%)
Query: 25 LVVSSDGSFIACACGES-INIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSRE 83
+V+SSDG F + + + DL+ G + + ++A S D++ + S+ R
Sbjct: 69 VVLSSDGQFALSGSWDGELRLWDLATGESTRRFVGHTKDVLSVAFSTDNRQIVSASRDRT 128
Query: 84 IRVWDLSTL-KCLRSWKGHDGPAIGMAC---HPSGGL--LATAGADRKVLVWDVDGGFCT 137
I++W+ TL +C + DG ++C P+ + + +A D+ V VW++
Sbjct: 129 IKLWN--TLGECKYTISEADGHKEWVSCVRFSPNTLVPTIVSASWDKTVKVWNLQNCKLR 186
Query: 138 HYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAIT 197
+ GH G ++++ PD SL SG D + +WDL K + +L+ S + S+ +
Sbjct: 187 NTLAGHSGYLNTVAVSPDG--SLCASGGKDGVILLWDLAEGKKLYSLEAG-SIIHSLCFS 243
Query: 198 SDGSTLISAGRDKVVNLWDLRDYS 221
+ L +A + + +WDL S
Sbjct: 244 PNRYWLCAATENSI-RIWDLESKS 266
Score = 125 (49.1 bits), Expect = 0.00010, P = 0.00010
Identities = 58/248 (23%), Positives = 111/248 (44%)
Query: 346 SKRLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLA---GHSEIVLCL 402
++R VG+ +++L + F + Q ++ A+ +++++ C Y ++ GH E V C+
Sbjct: 98 TRRFVGHTKDVLSVAFSTDNRQIVS-ASRDRTIKLWNTLG-ECKYTISEADGHKEWVSCV 155
Query: 403 DTCALSSGKIL--IVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSG 460
S ++ IV+ S D +V++W+ ++ GH G + VA S + SG
Sbjct: 156 ---RFSPNTLVPTIVSASWDKTVKVWNLQNCKLRNTLAGHSGYLNTVAVSPD-GSLCASG 211
Query: 461 SSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACV 520
D I +W + ++ +L+A G I+SL +PN +C +++ +
Sbjct: 212 GKDGVILLWDLA----EGKKLYSLEA-------GSIIHSLCFSPNRYWLCAATENSIR-I 259
Query: 521 WRLPDLVSV----VTFRGH-KRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFE 575
W L V V + ++ S +V+ S + WS +DG+ L F
Sbjct: 260 WDLESKSVVEDLKVDLKAEAEKTDGSTGIGNKTKVIYCTSLN-----WS-ADGNTL--FS 311
Query: 576 GHTSSVLR 583
G+T V+R
Sbjct: 312 GYTDGVIR 319
Score = 124 (48.7 bits), Expect = 0.00013, P = 0.00013
Identities = 37/161 (22%), Positives = 70/161 (43%)
Query: 32 SFIACACGESINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLST 91
+ ++ + +++ + +L N +++T+ G S + +A+SPD L S G I +WDL+
Sbjct: 165 TIVSASWDKTVKVWNLQNCKLRNTLAGHSGYLNTVAVSPDGSLCASGGKDGVILLWDLAE 224
Query: 92 LKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFK---------- 141
K L S + G I C A + + +WD++ K
Sbjct: 225 GKKLYSLEA--GSIIHSLCFSPNRYWLCAATENSIRIWDLESKSVVEDLKVDLKAEAEKT 282
Query: 142 -GHKGV--VSSILF----HPDTDKSLLFSGSDDATVRVWDL 175
G G+ + +++ + D + LFSG D +RVW +
Sbjct: 283 DGSTGIGNKTKVIYCTSLNWSADGNTLFSGYTDGVIRVWGI 323
Score = 122 (48.0 bits), Expect = 0.00022, P = 0.00022
Identities = 45/163 (27%), Positives = 78/163 (47%)
Query: 75 LFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGG 134
+ S+ + ++VW+L K + GH G +A P G L A+ G D +L+WD+ G
Sbjct: 166 IVSASWDKTVKVWNLQNCKLRNTLAGHSGYLNTVAVSPDGSLCASGGKDGVILLWDLAEG 225
Query: 135 FCTHYFKGHKGVVSSILFHPD-------TDKSL----LFSGSDDATVRVWDLLA---KKC 180
+ + ++ S+ F P+ T+ S+ L S S ++V DL A K
Sbjct: 226 KKLYSLEAGS-IIHSLCFSPNRYWLCAATENSIRIWDLESKSVVEDLKV-DLKAEAEKTD 283
Query: 181 VATLDKHFSRV---TSMAITSDGSTLISAGRDKVVNLWDLRDY 220
+T + ++V TS+ ++DG+TL S D V+ +W + Y
Sbjct: 284 GSTGIGNKTKVIYCTSLNWSADGNTLFSGYTDGVIRVWGIGRY 326
Score = 43 (20.2 bits), Expect = 6.4e-20, Sum P(3) = 6.4e-20
Identities = 8/41 (19%), Positives = 17/41 (41%)
Query: 266 HFITVGERGIVRMWNADSACLYEQKSSDVTISFEMDDSKRG 306
+++ +R+W+ +S + E D+ E D G
Sbjct: 247 YWLCAATENSIRIWDLESKSVVEDLKVDLKAEAEKTDGSTG 287
Score = 41 (19.5 bits), Expect = 6.4e-20, Sum P(3) = 6.4e-20
Identities = 8/15 (53%), Positives = 10/15 (66%)
Query: 455 NFLVSGSSDHTIKVW 469
N L SG +D I+VW
Sbjct: 307 NTLFSGYTDGVIRVW 321
>UNIPROTKB|E9PFC6 [details] [associations]
symbol:POC1A "POC1 centriolar protein homolog A"
species:9606 "Homo sapiens" [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:AC115284
CTD:25886 KO:K16482 RefSeq:NP_001155053.1 UniGene:Hs.476306
GeneID:25886 KEGG:hsa:25886 HGNC:HGNC:24488 GenomeRNAi:25886
NextBio:47308 EMBL:AC097637 IPI:IPI00936600
ProteinModelPortal:E9PFC6 SMR:E9PFC6 Ensembl:ENST00000474012
ArrayExpress:E9PFC6 Bgee:E9PFC6 Uniprot:E9PFC6
Length = 369
Score = 258 (95.9 bits), Expect = 6.6e-20, P = 6.6e-20
Identities = 69/270 (25%), Positives = 123/270 (45%)
Query: 378 VQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVG 437
+ V+ + S +Y GH + V C++ SG +L +GS+D +VR+W + V
Sbjct: 5 LMVWHMKPQSRAYRFTGHKDAVTCVNFSP--SGHLL-ASGSRDKTVRIWVPNVKGESTVF 61
Query: 438 TGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDI 497
H V +V F Q+F V+ S D T+KVW+ K ++ H +
Sbjct: 62 RAHTATVRSVHFCSDGQSF-VTASDDKTVKVWATH----------RQKFLFSLSQHINWV 110
Query: 498 NSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGD 557
+P+ L+ + S D+T +W V ++ H + V+F P + A D
Sbjct: 111 RCAKFSPDGRLIVSASDDKTVKLWDKSSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMD 170
Query: 558 KTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYD 617
T+K+W + L+ ++ H+++V SF G +++ +D +K+ + G + T
Sbjct: 171 NTVKVWDVRTHRLLQHYQLHSAAVNGLSFHPSGNYLITASSDSTLKILDLMEGRLLYTLH 230
Query: 618 KHEDKIWALAVGKKTEMFATGGSDALVNLW 647
H+ +A + E FA+GGSD V +W
Sbjct: 231 GHQGPATTVAFSRTGEYFASGGSDEQVMVW 260
Score = 241 (89.9 bits), Expect = 9.8e-18, P = 9.8e-18
Identities = 56/204 (27%), Positives = 100/204 (49%)
Query: 29 SDG-SFIACACGESINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRVW 87
SDG SF+ + +++ + ++ + + SPD +L+ S+ + +++W
Sbjct: 75 SDGQSFVTASDDKTVKVWATHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLW 134
Query: 88 DLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVV 147
D S+ +C+ S+ H G + HPSG +A AG D V VWDV +++ H V
Sbjct: 135 DKSSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDVRTHRLLQHYQLHSAAV 194
Query: 148 SSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAG 207
+ + FHP + L + S D+T+++ DL+ + + TL H T++A + G S G
Sbjct: 195 NGLSFHPSGN--YLITASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGG 252
Query: 208 RDKVVNLW----DLRDYSCKLTVP 227
D+ V +W D+ D+ VP
Sbjct: 253 SDEQVMVWKSNFDIVDHGEVTKVP 276
Score = 232 (86.7 bits), Expect = 1.2e-16, P = 1.2e-16
Identities = 62/228 (27%), Positives = 100/228 (43%)
Query: 420 DNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAE 479
D+ + +W + + TGH AV V FS + L SGS D T+++W
Sbjct: 2 DSCLMVWHMKPQSRAYRFTGHKDAVTCVNFSPS-GHLLASGSRDKTVRIWV--------- 51
Query: 480 QPMNLKAKAVV-AAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRG 538
P N+K ++ V AH + S+ + T S D+T VW + + H
Sbjct: 52 -P-NVKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKTVKVWATHRQKFLFSLSQHINW 109
Query: 539 IWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGA 598
+ +FSP +++++AS DKT+K+W S C+ ++ H V F G I + G
Sbjct: 110 VRCAKFSPDGRLIVSASDDKTVKLWDKSSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGM 169
Query: 599 DGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNL 646
D VK+W VRT + Y H + L+ T SD+ + +
Sbjct: 170 DNTVKVWDVRTHRLLQHYQLHSAAVNGLSFHPSGNYLITASSDSTLKI 217
Score = 179 (68.1 bits), Expect = 1.3e-10, P = 1.3e-10
Identities = 45/163 (27%), Positives = 70/163 (42%)
Query: 58 GGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPSGGLL 117
G D +T + SP LL S + +R+W + ++ H + G
Sbjct: 21 GHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQSF 80
Query: 118 ATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLA 177
TA D+ V VW H V F PD L+ S SDD TV++WD +
Sbjct: 81 VTASDDKTVKVWATHRQKFLFSLSQHINWVRCAKFSPDG--RLIVSASDDKTVKLWDKSS 138
Query: 178 KKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDY 220
++CV + +H VT + G+ + +AG D V +WD+R +
Sbjct: 139 RECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDVRTH 181
Score = 174 (66.3 bits), Expect = 4.9e-10, P = 4.9e-10
Identities = 46/193 (23%), Positives = 85/193 (44%)
Query: 28 SSDGSFIACACGESINIVDLSNASIKSTI-EGGSDTITALALSPDDKLLFSSGHSREIRV 86
S G +A + + + N +ST+ + T+ ++ D + ++ + ++V
Sbjct: 32 SPSGHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKTVKV 91
Query: 87 WDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGV 146
W K L S H P G L+ +A D+ V +WD C H + H G
Sbjct: 92 WATHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKSSRECVHSYCEHGGF 151
Query: 147 VSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISA 206
V+ + FHP + + +G D+ TV+VWD+ + + H + V ++ G+ LI+A
Sbjct: 152 VTYVDFHP-SGTCIAAAGMDN-TVKVWDVRTHRLLQHYQLHSAAVNGLSFHPSGNYLITA 209
Query: 207 GRDKVVNLWDLRD 219
D + + DL +
Sbjct: 210 SSDSTLKILDLME 222
Score = 172 (65.6 bits), Expect = 8.1e-10, P = 8.1e-10
Identities = 44/141 (31%), Positives = 67/141 (47%)
Query: 84 IRVWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVW--DVDGGFCTHYFK 141
+ VW + + GH + PSG LLA+ D+ V +W +V G + F+
Sbjct: 5 LMVWHMKPQSRAYRFTGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGE--STVFR 62
Query: 142 GHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGS 201
H V S+ F D +S + + SDD TV+VW +K + +L +H + V + DG
Sbjct: 63 AHTATVRSVHFCSD-GQSFV-TASDDKTVKVWATHRQKFLFSLSQHINWVRCAKFSPDGR 120
Query: 202 TLISAGRDKVVNLWDLRDYSC 222
++SA DK V LWD C
Sbjct: 121 LIVSASDDKTVKLWDKSSREC 141
Score = 153 (58.9 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 34/137 (24%), Positives = 56/137 (40%)
Query: 515 DRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTF 574
D VW + F GHK + V FSP ++ + S DKT++IW + F
Sbjct: 2 DSCLMVWHMKPQSRAYRFTGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGESTVF 61
Query: 575 EGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEM 634
HT++V F + G V+ D VK+W + + + +H + + +
Sbjct: 62 RAHTATVRSVHFCSDGQSFVTASDDKTVKVWATHRQKFLFSLSQHINWVRCAKFSPDGRL 121
Query: 635 FATGGSDALVNLWHDST 651
+ D V LW S+
Sbjct: 122 IVSASDDKTVKLWDKSS 138
Score = 132 (51.5 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 32/93 (34%), Positives = 45/93 (48%)
Query: 123 DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVA 182
D ++VW + + F GHK V+ + F P LL SGS D TVR+W K
Sbjct: 2 DSCLMVWHMKPQSRAYRFTGHKDAVTCVNFSPSGH--LLASGSRDKTVRIWVPNVKGEST 59
Query: 183 TLDKHFSRVTSMAITSDGSTLISAGRDKVVNLW 215
H + V S+ SDG + ++A DK V +W
Sbjct: 60 VFRAHTATVRSVHFCSDGQSFVTASDDKTVKVW 92
>UNIPROTKB|Q9PTR5 [details] [associations]
symbol:PAFAH1B1 "Lissencephaly-1 homolog" species:9031
"Gallus gallus" [GO:0007067 "mitosis" evidence=IEA] [GO:0051301
"cell division" evidence=IEA] [GO:0000132 "establishment of mitotic
spindle orientation" evidence=IEA] [GO:0000235 "astral microtubule"
evidence=IEA] [GO:0000776 "kinetochore" evidence=IEA] [GO:0001667
"ameboidal cell migration" evidence=IEA] [GO:0001675 "acrosome
assembly" evidence=IEA] [GO:0001764 "neuron migration"
evidence=IEA] [GO:0001961 "positive regulation of cytokine-mediated
signaling pathway" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005813 "centrosome" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IEA] [GO:0005938 "cell
cortex" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IEA] [GO:0007405 "neuroblast proliferation" evidence=IEA]
[GO:0007611 "learning or memory" evidence=IEA] [GO:0008017
"microtubule binding" evidence=IEA] [GO:0008090 "retrograde axon
cargo transport" evidence=IEA] [GO:0008344 "adult locomotory
behavior" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0021540 "corpus callosum morphogenesis"
evidence=IEA] [GO:0021766 "hippocampus development" evidence=IEA]
[GO:0021819 "layer formation in cerebral cortex" evidence=IEA]
[GO:0030036 "actin cytoskeleton organization" evidence=IEA]
[GO:0031023 "microtubule organizing center organization"
evidence=IEA] [GO:0031252 "cell leading edge" evidence=IEA]
[GO:0031512 "motile primary cilium" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0036035
"osteoclast development" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=IEA] [GO:0045502 "dynein
binding" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0047496 "vesicle transport along
microtubule" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0048854 "brain morphogenesis"
evidence=IEA] [GO:0050885 "neuromuscular process controlling
balance" evidence=IEA] [GO:0051081 "nuclear envelope disassembly"
evidence=IEA] [GO:0051219 "phosphoprotein binding" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005938
GO:GO:0000132 GO:GO:0005635 GO:GO:0005813 GO:GO:0048471
GO:GO:0005875 GO:GO:0007399 GO:GO:0031252 GO:GO:0030154
GO:GO:0000776 GO:GO:0051301 GO:GO:0016477 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030036 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0000235 GO:GO:0032319 GO:GO:0031023 GO:GO:0047496
GO:GO:0031512 GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OMA:WVRGLAF OrthoDB:EOG4P5K93
HAMAP:MF_03141 InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 CTD:5048 EMBL:AF113946 IPI:IPI00596826
RefSeq:NP_989655.1 UniGene:Gga.11892 ProteinModelPortal:Q9PTR5
SMR:Q9PTR5 STRING:Q9PTR5 PRIDE:Q9PTR5 Ensembl:ENSGALT00000009368
GeneID:374224 KEGG:gga:374224 InParanoid:Q9PTR5 NextBio:20813726
GO:GO:0051081 Uniprot:Q9PTR5
Length = 410
Score = 247 (92.0 bits), Expect = 4.0e-18, P = 4.0e-18
Identities = 62/236 (26%), Positives = 104/236 (44%)
Query: 53 KSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHP 112
K + G +T + P ++ S+ I+VWD T R+ KGH ++
Sbjct: 101 KYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDH 160
Query: 113 SGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRV 172
+G LLA+ AD + +WD G C GH VSS+ P+ D + S S D T+++
Sbjct: 161 TGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDH--IVSASRDKTIKM 218
Query: 173 WDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYEMV 232
W++ CV T H V + DG+ + S D+ V +W + CK + +E V
Sbjct: 219 WEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHV 278
Query: 233 EAVCAIPPGSAFDSFLSSYNQQTIKKKRRSLEIHFITVGERG-IVRMWNADSA-CL 286
+ P S++ + + +T K + F+ G R ++MW+ + CL
Sbjct: 279 VECISWAPESSYSTISEATGSETKKSGKPG---PFLLSGSRDKTIKMWDISTGMCL 331
Score = 243 (90.6 bits), Expect = 3.3e-17, Sum P(2) = 3.3e-17
Identities = 66/205 (32%), Positives = 91/205 (44%)
Query: 438 TGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDI 497
+GH V V F + +VS S D TIKVW ++ + D E+ LK H +
Sbjct: 105 SGHRSPVTRVIFHPVF-SVMVSASEDATIKVWDYE--TGDFER--TLKG------HTDSV 153
Query: 498 NSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGD 557
++ L+ + S D T +W + T GH + SV P +++AS D
Sbjct: 154 QDISFDHTGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRD 213
Query: 558 KTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYD 617
KTIK+W + G C+KTF GH V G I SC D V++W V T EC A
Sbjct: 214 KTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELR 273
Query: 618 KHEDKI----WALAVGKKTEMFATG 638
+HE + WA T ATG
Sbjct: 274 EHEHVVECISWAPESSYSTISEATG 298
Score = 240 (89.5 bits), Expect = 7.3e-20, Sum P(2) = 7.3e-20
Identities = 53/168 (31%), Positives = 87/168 (51%)
Query: 41 SINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKG 100
+I + D + T++G +D++ ++ KLL S I++WD +C+R+ G
Sbjct: 131 TIKVWDYETGDFERTLKGHTDSVQDISFDHTGKLLASCSADMTIKLWDFQGFECIRTMHG 190
Query: 101 HDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSL 160
HD +A P+G + +A D+ + +W+V G+C F GH+ V + P+ D +L
Sbjct: 191 HDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMV--RPNQDGTL 248
Query: 161 LFSGSDDATVRVWDLLAKKCVATLDKHFSRVT--SMAITSDGSTLISA 206
+ S S+D TVRVW + K+C A L +H V S A S ST+ A
Sbjct: 249 IASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSTISEA 296
Score = 227 (85.0 bits), Expect = 7.6e-16, P = 7.6e-16
Identities = 73/283 (25%), Positives = 121/283 (42%)
Query: 378 VQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVG 437
++V+D + L GH++ V D +GK+L + S D +++LWD + C+
Sbjct: 132 IKVWDYETGDFERTLKGHTDSVQ--DISFDHTGKLL-ASCSADMTIKLWDFQGFECIRTM 188
Query: 438 TGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVW---------SFDGLSDDAEQPMNLKAKA 488
GH V +VA + +VS S D TIK+W +F G + +
Sbjct: 189 HGHDHNVSSVAIMPN-GDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGT 247
Query: 489 VVAAHGKD--INSLAVAPNDSLVCTGSQDRTA-CV-WRLPDLVSVVTFRGHKRGIWSVEF 544
++A+ D + VA + + C+ W S ++ G + +
Sbjct: 248 LIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSTIS---EATGSETKKS 304
Query: 545 SPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKL 604
+++ S DKTIK+W IS G CL T GH + V F + G I+SC D +++
Sbjct: 305 GKPGPFLLSGSRDKTIKMWDISTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRV 364
Query: 605 WTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLW 647
W + C+ T + HE + +L K TG D V +W
Sbjct: 365 WDFKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 407
Score = 216 (81.1 bits), Expect = 1.3e-14, P = 1.3e-14
Identities = 60/272 (22%), Positives = 119/272 (43%)
Query: 347 KRLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCA 406
+ L G+ + + D+ F + LA + ++++D C + GH V + A
Sbjct: 144 RTLKGHTDSVQDISF-DHTGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNV---SSVA 199
Query: 407 LSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTI 466
+ IV+ S+D ++++W+ ++ CV TGH V V ++ + S S+D T+
Sbjct: 200 IMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQD-GTLIASCSNDQTV 258
Query: 467 KVWSFDGLSDDAE-QPMNLKAKAVVAAHGKDINSLAVAPNDS---------LVCTGSQDR 516
+VW AE + + + A ++++ A + +GS+D+
Sbjct: 259 RVWVVATKECKAELREHEHVVECISWAPESSYSTISEATGSETKKSGKPGPFLLSGSRDK 318
Query: 517 TACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEG 576
T +W + + ++T GH + V F + +++ + DKT+++W + C+KT
Sbjct: 319 TIKMWDISTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDFKNKRCMKTLNA 378
Query: 577 HTSSVLRASFLTRGAQIVSCGADGLVKLWTVR 608
H V F +V+ D VK+W R
Sbjct: 379 HEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
Score = 212 (79.7 bits), Expect = 3.7e-14, P = 3.7e-14
Identities = 41/161 (25%), Positives = 75/161 (46%)
Query: 487 KAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSP 546
K ++ H + + P S++ + S+D T VW T +GH + + F
Sbjct: 101 KYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDH 160
Query: 547 VDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWT 606
+++ + S D TIK+W C++T GH +V + + G IVS D +K+W
Sbjct: 161 TGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWE 220
Query: 607 VRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLW 647
V+TG C+ T+ H + + + + + A+ +D V +W
Sbjct: 221 VQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVW 261
Score = 202 (76.2 bits), Expect = 4.9e-13, P = 4.9e-13
Identities = 44/138 (31%), Positives = 65/138 (47%)
Query: 514 QDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKT 573
Q R W +P GH+ + V F PV V+++AS D TIK+W G +T
Sbjct: 87 QKRDPKEW-IPRPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERT 145
Query: 574 FEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTE 633
+GHT SV SF G + SC AD +KLW + ECI T H+ + ++A+ +
Sbjct: 146 LKGHTDSVQDISFDHTGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGD 205
Query: 634 MFATGGSDALVNLWHDST 651
+ D + +W T
Sbjct: 206 HIVSASRDKTIKMWEVQT 223
Score = 170 (64.9 bits), Expect = 1.9e-11, Sum P(2) = 1.9e-11
Identities = 33/105 (31%), Positives = 53/105 (50%)
Query: 114 GGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVW 173
G L + D+ + +WD+ G C GH V +LFH + + S +DD T+RVW
Sbjct: 308 GPFLLSGSRDKTIKMWDISTGMCLMTLVGHDNWVRGVLFH--SGGKFILSCADDKTLRVW 365
Query: 174 DLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLR 218
D K+C+ TL+ H VTS+ +++ D+ V +W+ R
Sbjct: 366 DFKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
Score = 160 (61.4 bits), Expect = 2.3e-08, P = 2.3e-08
Identities = 39/133 (29%), Positives = 62/133 (46%)
Query: 42 INIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGH 101
+ + + S STI + + T + P LL S + I++WD+ST CL + GH
Sbjct: 279 VECISWAPESSYSTISEATGSETKKSGKPGPFLL-SGSRDKTIKMWDISTGMCLMTLVGH 337
Query: 102 DGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLL 161
D G+ H G + + D+ + VWD C H+ V+S+ FH +
Sbjct: 338 DNWVRGVLFHSGGKFILSCADDKTLRVWDFKNKRCMKTLNAHEHFVTSLDFHKTAP--YV 395
Query: 162 FSGSDDATVRVWD 174
+GS D TV+VW+
Sbjct: 396 VTGSVDQTVKVWE 408
Score = 135 (52.6 bits), Expect = 9.6e-14, Sum P(2) = 9.6e-14
Identities = 32/140 (22%), Positives = 66/140 (47%)
Query: 31 GSFIA-CACGESINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWDL 89
G +A C+ +I + D T+ G ++++A+ P+ + S+ + I++W++
Sbjct: 162 GKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEV 221
Query: 90 STLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSS 149
T C++++ GH + + G L+A+ D+ V VW V C + H+ VV
Sbjct: 222 QTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVEC 281
Query: 150 ILFHPDTDKSLLFSGSDDAT 169
I + P++ S + + T
Sbjct: 282 ISWAPESSYSTISEATGSET 301
Score = 123 (48.4 bits), Expect = 9.6e-14, Sum P(2) = 9.6e-14
Identities = 23/70 (32%), Positives = 38/70 (54%)
Query: 161 LFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDY 220
L SGS D T+++WD+ C+ TL H + V + S G ++S DK + +WD ++
Sbjct: 311 LLSGSRDKTIKMWDISTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDFKNK 370
Query: 221 SCKLTVPTYE 230
C T+ +E
Sbjct: 371 RCMKTLNAHE 380
Score = 66 (28.3 bits), Expect = 7.3e-20, Sum P(2) = 7.3e-20
Identities = 22/80 (27%), Positives = 38/80 (47%)
Query: 200 GSTLISAGRDKVVNLWDLRDYSCKLTVPTYE-MVEAVCAIPPGSAFDSFLSSYNQQTIK- 257
G L+S RDK + +WD+ C +T+ ++ V V G F LS + +T++
Sbjct: 308 GPFLLSGSRDKTIKMWDISTGMCLMTLVGHDNWVRGVL-FHSGGKF--ILSCADDKTLRV 364
Query: 258 ---KKRRSLEI-----HFIT 269
K +R ++ HF+T
Sbjct: 365 WDFKNKRCMKTLNAHEHFVT 384
Score = 63 (27.2 bits), Expect = 1.9e-11, Sum P(2) = 1.9e-11
Identities = 15/79 (18%), Positives = 36/79 (45%)
Query: 25 LVVSSDGSFIACACGE-SINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSRE 83
+ + +G I A + +I + ++ T G + + + + D L+ S + +
Sbjct: 198 VAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQT 257
Query: 84 IRVWDLSTLKCLRSWKGHD 102
+RVW ++T +C + H+
Sbjct: 258 VRVWVVATKECKAELREHE 276
Score = 37 (18.1 bits), Expect = 3.3e-17, Sum P(2) = 3.3e-17
Identities = 7/23 (30%), Positives = 10/23 (43%)
Query: 629 GKKTEMFATGGSDALVNLWHDST 651
GK +G D + +W ST
Sbjct: 305 GKPGPFLLSGSRDKTIKMWDIST 327
>ZFIN|ZDB-GENE-040116-2 [details] [associations]
symbol:pafah1b1a "platelet-activating factor
acetylhydrolase, isoform Ib, alpha subunit a" species:7955 "Danio
rerio" [GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0048854 "brain
morphogenesis" evidence=IGI;IMP] [GO:0030154 "cell differentiation"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0007049
"cell cycle" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0007275 "multicellular
organismal development" evidence=IEA] [GO:0005815 "microtubule
organizing center" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 ZFIN:ZDB-GENE-040116-2 GO:GO:0005737
GO:GO:0030154 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005815
InterPro:IPR013720 Pfam:PF08513 GO:GO:0005874 GO:GO:0048854
EMBL:DQ141217 EMBL:BX324162 EMBL:BC053205 IPI:IPI00500448
RefSeq:NP_958502.1 UniGene:Dr.140597 ProteinModelPortal:Q7T394
SMR:Q7T394 STRING:Q7T394 PRIDE:Q7T394 Ensembl:ENSDART00000042218
GeneID:394246 KEGG:dre:394246 CTD:394246
GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OMA:WVRGLAF OrthoDB:EOG4P5K93
NextBio:20815155 Bgee:Q7T394 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 Uniprot:Q7T394
Length = 410
Score = 250 (93.1 bits), Expect = 1.8e-18, P = 1.8e-18
Identities = 64/236 (27%), Positives = 104/236 (44%)
Query: 53 KSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHP 112
K + G +T + P ++ S+ I+VWD T R+ KGH ++
Sbjct: 101 KYALSGHRSPVTRVIFHPVFSVIVSASEDATIKVWDHETGDFERTLKGHTDSVQDISFDH 160
Query: 113 SGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRV 172
+G LLA+ AD + +WD G C GH VSS+ P+ D + S S D T+++
Sbjct: 161 TGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDH--IVSASRDKTIKM 218
Query: 173 WDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYEMV 232
W++ CV T H V + DG+ + S+ D+ V +W + CK + +E V
Sbjct: 219 WEVATGYCVKTFTGHREWVRMVRPNQDGTLIASSSNDQTVRVWVVATKECKAELREHEHV 278
Query: 233 EAVCAIPPGSAFDSFLSSYNQQTIKKKRRSLEIHFITVGERG-IVRMWNAD-SACL 286
+ P SA + L + +T K + F+ G R ++MW+ CL
Sbjct: 279 VECISWAPESAHPTILEATGSETKKSGKPG---PFLLSGSRDKTIKMWDVSIGMCL 331
Score = 237 (88.5 bits), Expect = 8.1e-20, Sum P(2) = 8.1e-20
Identities = 46/147 (31%), Positives = 79/147 (53%)
Query: 41 SINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKG 100
+I + D + T++G +D++ ++ KLL S I++WD +C+R+ G
Sbjct: 131 TIKVWDHETGDFERTLKGHTDSVQDISFDHTGKLLASCSADMTIKLWDFQGFECIRTMHG 190
Query: 101 HDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSL 160
HD +A P+G + +A D+ + +W+V G+C F GH+ V + P+ D +L
Sbjct: 191 HDHNVSSVAIMPNGDHIVSASRDKTIKMWEVATGYCVKTFTGHREWVRMV--RPNQDGTL 248
Query: 161 LFSGSDDATVRVWDLLAKKCVATLDKH 187
+ S S+D TVRVW + K+C A L +H
Sbjct: 249 IASSSNDQTVRVWVVATKECKAELREH 275
Score = 233 (87.1 bits), Expect = 1.6e-16, P = 1.6e-16
Identities = 65/205 (31%), Positives = 91/205 (44%)
Query: 438 TGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDI 497
+GH V V F + +VS S D TIKVW + + D E+ LK H +
Sbjct: 105 SGHRSPVTRVIFHPVF-SVIVSASEDATIKVWDHE--TGDFER--TLKG------HTDSV 153
Query: 498 NSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGD 557
++ L+ + S D T +W + T GH + SV P +++AS D
Sbjct: 154 QDISFDHTGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRD 213
Query: 558 KTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYD 617
KTIK+W ++ G C+KTF GH V G I S D V++W V T EC A
Sbjct: 214 KTIKMWEVATGYCVKTFTGHREWVRMVRPNQDGTLIASSSNDQTVRVWVVATKECKAELR 273
Query: 618 KHEDKI----WALAVGKKTEMFATG 638
+HE + WA T + ATG
Sbjct: 274 EHEHVVECISWAPESAHPTILEATG 298
Score = 216 (81.1 bits), Expect = 1.3e-14, P = 1.3e-14
Identities = 63/272 (23%), Positives = 117/272 (43%)
Query: 347 KRLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCA 406
+ L G+ + + D+ F + LA + ++++D C + GH V + A
Sbjct: 144 RTLKGHTDSVQDISF-DHTGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNV---SSVA 199
Query: 407 LSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTI 466
+ IV+ S+D ++++W+ + CV TGH V V ++ + S S+D T+
Sbjct: 200 IMPNGDHIVSASRDKTIKMWEVATGYCVKTFTGHREWVRMVRPNQD-GTLIASSSNDQTV 258
Query: 467 KVWSFDGLSDDAE-----QPMNLKAKAVVAAHGKDINSLAVAPNDS-----LVCTGSQDR 516
+VW AE + + A +AH + + S + +GS+D+
Sbjct: 259 RVWVVATKECKAELREHEHVVECISWAPESAHPTILEATGSETKKSGKPGPFLLSGSRDK 318
Query: 517 TACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEG 576
T +W + + ++T GH + V P + +++ + DKT++IW + C KT
Sbjct: 319 TIKMWDVSIGMCLMTLVGHDNWVRGVLVHPGGKYIVSCADDKTLRIWDYKNKRCTKTLSA 378
Query: 577 HTSSVLRASFLTRGAQIVSCGADGLVKLWTVR 608
H V F +V+ D VK+W R
Sbjct: 379 HEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
Score = 215 (80.7 bits), Expect = 1.7e-14, P = 1.7e-14
Identities = 71/282 (25%), Positives = 115/282 (40%)
Query: 378 VQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVG 437
++V+D + L GH++ V D +GK+L + S D +++LWD + C+
Sbjct: 132 IKVWDHETGDFERTLKGHTDSVQ--DISFDHTGKLL-ASCSADMTIKLWDFQGFECIRTM 188
Query: 438 TGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVW---------SFDGLSDDAEQPMNLKAKA 488
GH V +VA + +VS S D TIK+W +F G + +
Sbjct: 189 HGHDHNVSSVAIMPN-GDHIVSASRDKTIKMWEVATGYCVKTFTGHREWVRMVRPNQDGT 247
Query: 489 VVAAHGKD--INSLAVAPNDSLVCTGSQDRTA-CVWRLPDLVSVVTFRGHKRGIWSVEFS 545
++A+ D + VA + + C+ P+ G + +
Sbjct: 248 LIASSSNDQTVRVWVVATKECKAELREHEHVVECISWAPESAHPTILEA--TGSETKKSG 305
Query: 546 PVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLW 605
+++ S DKTIK+W +S G CL T GH + V G IVSC D +++W
Sbjct: 306 KPGPFLLSGSRDKTIKMWDVSIGMCLMTLVGHDNWVRGVLVHPGGKYIVSCADDKTLRIW 365
Query: 606 TVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLW 647
+ C T HE + +L K TG D V +W
Sbjct: 366 DYKNKRCTKTLSAHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 407
Score = 213 (80.0 bits), Expect = 2.9e-14, P = 2.9e-14
Identities = 41/161 (25%), Positives = 74/161 (45%)
Query: 487 KAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSP 546
K ++ H + + P S++ + S+D T VW T +GH + + F
Sbjct: 101 KYALSGHRSPVTRVIFHPVFSVIVSASEDATIKVWDHETGDFERTLKGHTDSVQDISFDH 160
Query: 547 VDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWT 606
+++ + S D TIK+W C++T GH +V + + G IVS D +K+W
Sbjct: 161 TGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWE 220
Query: 607 VRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLW 647
V TG C+ T+ H + + + + + A+ +D V +W
Sbjct: 221 VATGYCVKTFTGHREWVRMVRPNQDGTLIASSSNDQTVRVW 261
Score = 203 (76.5 bits), Expect = 3.8e-13, P = 3.8e-13
Identities = 44/138 (31%), Positives = 66/138 (47%)
Query: 514 QDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKT 573
Q R W +P GH+ + V F PV V+++AS D TIK+W G +T
Sbjct: 87 QKRDPKEW-IPRPPEKYALSGHRSPVTRVIFHPVFSVIVSASEDATIKVWDHETGDFERT 145
Query: 574 FEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTE 633
+GHT SV SF G + SC AD +KLW + ECI T H+ + ++A+ +
Sbjct: 146 LKGHTDSVQDISFDHTGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGD 205
Query: 634 MFATGGSDALVNLWHDST 651
+ D + +W +T
Sbjct: 206 HIVSASRDKTIKMWEVAT 223
Score = 162 (62.1 bits), Expect = 1.8e-11, Sum P(2) = 1.8e-11
Identities = 33/105 (31%), Positives = 50/105 (47%)
Query: 114 GGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVW 173
G L + D+ + +WDV G C GH V +L HP + S +DD T+R+W
Sbjct: 308 GPFLLSGSRDKTIKMWDVSIGMCLMTLVGHDNWVRGVLVHPGG--KYIVSCADDKTLRIW 365
Query: 174 DLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLR 218
D K+C TL H VTS+ +++ D+ V +W+ R
Sbjct: 366 DYKNKRCTKTLSAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
Score = 161 (61.7 bits), Expect = 1.7e-08, P = 1.7e-08
Identities = 32/100 (32%), Positives = 50/100 (50%)
Query: 75 LFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGG 134
L S + I++WD+S CL + GHD G+ HP G + + D+ + +WD
Sbjct: 311 LLSGSRDKTIKMWDVSIGMCLMTLVGHDNWVRGVLVHPGGKYIVSCADDKTLRIWDYKNK 370
Query: 135 FCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWD 174
CT H+ V+S+ FH + +GS D TV+VW+
Sbjct: 371 RCTKTLSAHEHFVTSLDFHKTAP--YVVTGSVDQTVKVWE 408
Score = 133 (51.9 bits), Expect = 2.6e-13, Sum P(2) = 2.6e-13
Identities = 31/140 (22%), Positives = 67/140 (47%)
Query: 31 GSFIA-CACGESINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWDL 89
G +A C+ +I + D T+ G ++++A+ P+ + S+ + I++W++
Sbjct: 162 GKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEV 221
Query: 90 STLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSS 149
+T C++++ GH + + G L+A++ D+ V VW V C + H+ VV
Sbjct: 222 ATGYCVKTFTGHREWVRMVRPNQDGTLIASSSNDQTVRVWVVATKECKAELREHEHVVEC 281
Query: 150 ILFHPDTDKSLLFSGSDDAT 169
I + P++ + + T
Sbjct: 282 ISWAPESAHPTILEATGSET 301
Score = 121 (47.7 bits), Expect = 2.6e-13, Sum P(2) = 2.6e-13
Identities = 22/70 (31%), Positives = 38/70 (54%)
Query: 161 LFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDY 220
L SGS D T+++WD+ C+ TL H + V + + G ++S DK + +WD ++
Sbjct: 311 LLSGSRDKTIKMWDVSIGMCLMTLVGHDNWVRGVLVHPGGKYIVSCADDKTLRIWDYKNK 370
Query: 221 SCKLTVPTYE 230
C T+ +E
Sbjct: 371 RCTKTLSAHE 380
Score = 72 (30.4 bits), Expect = 1.8e-11, Sum P(2) = 1.8e-11
Identities = 23/107 (21%), Positives = 49/107 (45%)
Query: 25 LVVSSDGSFIACACGE-SINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSRE 83
+ + +G I A + +I + +++ T G + + + + D L+ SS + +
Sbjct: 198 VAIMPNGDHIVSASRDKTIKMWEVATGYCVKTFTGHREWVRMVRPNQDGTLIASSSNDQT 257
Query: 84 IRVWDLSTLKCLRSWKGHDG--PAIGMA---CHPSGGLLATAGADRK 125
+RVW ++T +C + H+ I A HP+ +L G++ K
Sbjct: 258 VRVWVVATKECKAELREHEHVVECISWAPESAHPT--ILEATGSETK 302
Score = 69 (29.3 bits), Expect = 8.1e-20, Sum P(2) = 8.1e-20
Identities = 22/77 (28%), Positives = 35/77 (45%)
Query: 200 GSTLISAGRDKVVNLWDLRDYSCKLTVPTYE-MVEAVCAIPPGS-----AFDSFLSSYNQ 253
G L+S RDK + +WD+ C +T+ ++ V V P G A D L ++
Sbjct: 308 GPFLLSGSRDKTIKMWDVSIGMCLMTLVGHDNWVRGVLVHPGGKYIVSCADDKTLRIWDY 367
Query: 254 QTIK-KKRRSLEIHFIT 269
+ + K S HF+T
Sbjct: 368 KNKRCTKTLSAHEHFVT 384
>MGI|MGI:1917485 [details] [associations]
symbol:Poc1a "POC1 centriolar protein homolog A
(Chlamydomonas)" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=ISO] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005932 "microtubule basal body" evidence=ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0030030 "cell projection
organization" evidence=IEA] [GO:0042995 "cell projection"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1917485 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0030030
GeneTree:ENSGT00700000104282 CTD:25886 HOVERGEN:HBG057502 KO:K16482
OMA:ANHVEFH OrthoDB:EOG412M5H EMBL:AK154163 EMBL:AK011064
EMBL:BC034901 IPI:IPI00318396 IPI:IPI00323477 IPI:IPI00742304
RefSeq:NP_081630.2 UniGene:Mm.23054 ProteinModelPortal:Q8JZX3
SMR:Q8JZX3 PRIDE:Q8JZX3 Ensembl:ENSMUST00000072206 GeneID:70235
KEGG:mmu:70235 UCSC:uc009rjk.2 UCSC:uc009rjl.2 HOGENOM:HOG000036743
InParanoid:Q8JZX3 NextBio:331220 Bgee:Q8JZX3 CleanEx:MM_WDR51A
Genevestigator:Q8JZX3 GermOnline:ENSMUSG00000023345 Uniprot:Q8JZX3
Length = 405
Score = 261 (96.9 bits), Expect = 8.4e-20, P = 8.4e-20
Identities = 69/254 (27%), Positives = 117/254 (46%)
Query: 394 GHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKL 453
GH + V C+D +L++ + +GS D+++ +W + + TGH AV V FS
Sbjct: 17 GHRDAVTCVDF-SLNTKHL--ASGSMDSTLMIWHMKPQSRAYRFTGHKDAVTCVNFSPS- 72
Query: 454 QNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVV-AAHGKDINSLAVAPNDSLVCTG 512
+ L SGS D T+++W P N+K ++ V AH + S+ + + T
Sbjct: 73 GHLLASGSRDKTVRIWV----------P-NVKGESTVFRAHTATVRSVHFCSDGQSLVTA 121
Query: 513 SQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLK 572
S D+T VW + + H + +FSP +++++AS DKT+K+W + C+
Sbjct: 122 SDDKTVKVWSTHRQRFLFSLTQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECIH 181
Query: 573 TFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKT 632
++ H V F G I + G D VK+W RT + Y H + AL+
Sbjct: 182 SYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDARTHRLLQHYQLHSAAVNALSFHPSG 241
Query: 633 EMFATGGSDALVNL 646
T SD+ + +
Sbjct: 242 NYLITASSDSTLKI 255
Score = 235 (87.8 bits), Expect = 8.9e-17, P = 8.9e-17
Identities = 66/214 (30%), Positives = 98/214 (45%)
Query: 439 GHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDIN 498
GH AV V FS ++ L SGS D T+ +W +P + + H +
Sbjct: 17 GHRDAVTCVDFSLNTKH-LASGSMDSTLMIWHM--------KPQSRAYR--FTGHKDAVT 65
Query: 499 SLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVT-FRGHKRGIWSVEFSPVDQVVITASGD 557
+ +P+ L+ +GS+D+T +W +P++ T FR H + SV F Q ++TAS D
Sbjct: 66 CVNFSPSGHLLASGSRDKTVRIW-VPNVKGESTVFRAHTATVRSVHFCSDGQSLVTASDD 124
Query: 558 KTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYD 617
KT+K+WS L + H + V A F G IVS D VKLW + ECI +Y
Sbjct: 125 KTVKVWSTHRQRFLFSLTQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECIHSYC 184
Query: 618 KHEDKIWALAVGKKTEMFATGGSDALVNLWHDST 651
+H + + A G D V +W T
Sbjct: 185 EHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDART 218
Score = 232 (86.7 bits), Expect = 2.0e-16, P = 2.0e-16
Identities = 52/197 (26%), Positives = 97/197 (49%)
Query: 29 SDG-SFIACACGESINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRVW 87
SDG S + + +++ + ++ + + SPD +L+ S+ + +++W
Sbjct: 113 SDGQSLVTASDDKTVKVWSTHRQRFLFSLTQHINWVRCAKFSPDGRLIVSASDDKTVKLW 172
Query: 88 DLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVV 147
D ++ +C+ S+ H G + HPSG +A AG D V VWD +++ H V
Sbjct: 173 DKTSRECIHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDARTHRLLQHYQLHSAAV 232
Query: 148 SSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAG 207
+++ FHP + L + S D+T+++ DL+ + + TL H T++A + G S G
Sbjct: 233 NALSFHPSGN--YLITASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGG 290
Query: 208 RDKVVNLW----DLRDY 220
D+ V +W D+ DY
Sbjct: 291 SDEQVMVWKSNFDIVDY 307
Score = 199 (75.1 bits), Expect = 4.9e-14, Sum P(2) = 4.9e-14
Identities = 51/174 (29%), Positives = 82/174 (47%)
Query: 51 SIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMAC 110
S++ +G D +T + S + K L S + +W + + GH +
Sbjct: 10 SLERHFKGHRDAVTCVDFSLNTKHLASGSMDSTLMIWHMKPQSRAYRFTGHKDAVTCVNF 69
Query: 111 HPSGGLLATAGADRKVLVW--DVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDA 168
PSG LLA+ D+ V +W +V G + F+ H V S+ F D +SL+ + SDD
Sbjct: 70 SPSGHLLASGSRDKTVRIWVPNVKGE--STVFRAHTATVRSVHFCSD-GQSLV-TASDDK 125
Query: 169 TVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSC 222
TV+VW ++ + +L +H + V + DG ++SA DK V LWD C
Sbjct: 126 TVKVWSTHRQRFLFSLTQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSREC 179
Score = 197 (74.4 bits), Expect = 1.7e-12, P = 1.7e-12
Identities = 64/258 (24%), Positives = 106/258 (41%)
Query: 348 RLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCAL 407
R G+ + + + F LA + + V+++ + S V H+ V + C
Sbjct: 56 RFTGHKDAVTCVNF-SPSGHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFC-- 112
Query: 408 SSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIK 467
S G+ L VT S D +V++W + + + T H+ V FS +VS S D T+K
Sbjct: 113 SDGQSL-VTASDDKTVKVWSTHRQRFLFSLTQHINWVRCAKFSPD-GRLIVSASDDKTVK 170
Query: 468 VWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLV 527
+W D S + HG + + P+ + + D T VW
Sbjct: 171 LW--DKTSRECIHSY--------CEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDARTHR 220
Query: 528 SVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFL 587
+ ++ H + ++ F P +ITAS D T+KI + +G L T GH +F
Sbjct: 221 LLQHYQLHSAAVNALSFHPSGNYLITASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFS 280
Query: 588 TRGAQIVSCGADGLVKLW 605
G S G+D V +W
Sbjct: 281 RTGEYFASGGSDEQVMVW 298
Score = 173 (66.0 bits), Expect = 4.5e-11, Sum P(2) = 4.5e-11
Identities = 46/193 (23%), Positives = 86/193 (44%)
Query: 28 SSDGSFIACACGESINIVDLSNASIKSTI-EGGSDTITALALSPDDKLLFSSGHSREIRV 86
S G +A + + + N +ST+ + T+ ++ D + L ++ + ++V
Sbjct: 70 SPSGHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQSLVTASDDKTVKV 129
Query: 87 WDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGV 146
W + L S H P G L+ +A D+ V +WD C H + H G
Sbjct: 130 WSTHRQRFLFSLTQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECIHSYCEHGGF 189
Query: 147 VSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISA 206
V+ + FHP + + +G D+ TV+VWD + + H + V +++ G+ LI+A
Sbjct: 190 VTYVDFHP-SGTCIAAAGMDN-TVKVWDARTHRLLQHYQLHSAAVNALSFHPSGNYLITA 247
Query: 207 GRDKVVNLWDLRD 219
D + + DL +
Sbjct: 248 SSDSTLKILDLME 260
Score = 56 (24.8 bits), Expect = 4.9e-14, Sum P(2) = 4.9e-14
Identities = 17/61 (27%), Positives = 24/61 (39%)
Query: 368 YLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWD 427
YL A++ +++ DL Y L GH T A S +G D V +W
Sbjct: 243 YLITASSDSTLKILDLMEGRLLYTLHGHQGPAT---TVAFSRTGEYFASGGSDEQVMVWK 299
Query: 428 S 428
S
Sbjct: 300 S 300
>UNIPROTKB|F1S8U2 [details] [associations]
symbol:BTRC "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071407 "cellular response to organic cyclic compound"
evidence=IEA] [GO:0061136 "regulation of proteasomal protein
catabolic process" evidence=IEA] [GO:0060444 "branching involved in
mammary gland duct morphogenesis" evidence=IEA] [GO:0051726
"regulation of cell cycle" evidence=IEA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0045862 "positive regulation of proteolysis"
evidence=IEA] [GO:0045309 "protein phosphorylated amino acid
binding" evidence=IEA] [GO:0043122 "regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=IEA] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IEA] [GO:0033598 "mammary
gland epithelial cell proliferation" evidence=IEA] [GO:0031648
"protein destabilization" evidence=IEA] [GO:0019005 "SCF ubiquitin
ligase complex" evidence=IEA] [GO:0008013 "beta-catenin binding"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0006470 "protein dephosphorylation"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
GO:GO:0045892 GO:GO:0045893 GO:GO:0006470 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0051726
GO:GO:0006511 GO:GO:0019005 GO:GO:0045862 GO:GO:0000209
GO:GO:0071407 GO:GO:0061136 GO:GO:0031648 GO:GO:0043122
GO:GO:0060444 GO:GO:0033598 GO:GO:0042753 OMA:NAYLKPM
GeneTree:ENSGT00690000101849 EMBL:CU469143 EMBL:CT737224
EMBL:CT737143 Ensembl:ENSSSCT00000011555 Uniprot:F1S8U2
Length = 506
Score = 265 (98.3 bits), Expect = 8.9e-20, P = 8.9e-20
Identities = 60/221 (27%), Positives = 115/221 (52%)
Query: 414 IVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDG 473
IV+G +DN++++WD + C + TGH G+V + + +++ +++GSSD T++VW +
Sbjct: 217 IVSGLRDNTIKIWDKSTLECKRILTGHTGSVLCLQYDERV---IITGSSDSTVRVWDVN- 272
Query: 474 LSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFR 533
+ +N + H + + L N+ ++ T S+DR+ VW + + R
Sbjct: 273 ----TGEMLN-----TLIHHCEAVLHLRF--NNGMMVTCSKDRSIAVWDMASPTDITLRR 321
Query: 534 ---GHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRG 590
GH+ + V+F D+ +++ASGD+TIK+W+ S ++T GH + A R
Sbjct: 322 VLVGHRAAVNVVDFD--DKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGI--ACLQYRD 377
Query: 591 AQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKK 631
+VS +D ++LW + G C+ + HE+ + + K
Sbjct: 378 RLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNK 418
Score = 251 (93.4 bits), Expect = 3.2e-18, P = 3.2e-18
Identities = 70/244 (28%), Positives = 120/244 (49%)
Query: 413 LIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFD 472
+I+TGS D++VR+WD + + H AV + F+ + +V+ S D +I VW
Sbjct: 256 VIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNNGM---MVTCSKDRSIAVW--- 309
Query: 473 GLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTF 532
D P ++ + V+ H +N V +D + + S DRT VW V T
Sbjct: 310 ----DMASPTDITLRRVLVGHRAAVN--VVDFDDKYIVSASGDRTIKVWNTSTCEFVRTL 363
Query: 533 RGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQ 592
GHKRGI +++ D++V++ S D TI++W I G+CL+ EGH V F + +
Sbjct: 364 NGHKRGIACLQYR--DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNK--R 419
Query: 593 IVSCGADGLVKLWTV--------RTGE-CIATYDKHEDKIWALAVGKKTEMFATGGSDAL 643
IVS DG +K+W + G C+ T +H +++ L + ++ ++ D +
Sbjct: 420 IVSGAYDGKIKVWDLIAALDPRAPAGTLCLRTLVEHSGRVFRLQFDE-FQIVSSSHDDTI 478
Query: 644 VNLW 647
+ +W
Sbjct: 479 L-IW 481
Score = 210 (79.0 bits), Expect = 1.1e-13, P = 1.1e-13
Identities = 57/213 (26%), Positives = 103/213 (48%)
Query: 29 SDGSFIACACGESINIVDLSNAS---IKSTIEGGSDTITALALSPDDKLLFSSGHSREIR 85
++G + C+ SI + D+++ + ++ + G + + DDK + S+ R I+
Sbjct: 293 NNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIK 350
Query: 86 VWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGA-DRKVLVWDVDGGFCTHYFKGHK 144
VW+ ST + +R+ GH G+AC L +G+ D + +WD++ G C +GH+
Sbjct: 351 VWNTSTCEFVRTLNGHKR---GIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHE 407
Query: 145 GVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKK---------CVATLDKHFSRVTSMA 195
+V I F D + SG+ D ++VWDL+A C+ TL +H RV +
Sbjct: 408 ELVRCIRF----DNKRIVSGAYDGKIKVWDLIAALDPRAPAGTLCLRTLVEHSGRVFRLQ 463
Query: 196 ITSDGSTLISAGRDKVVNLWD-LRDYSCKLTVP 227
D ++S+ D + +WD L D + + P
Sbjct: 464 F--DEFQIVSSSHDDTILIWDFLNDPAAQAEPP 494
Score = 173 (66.0 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 74/284 (26%), Positives = 122/284 (42%)
Query: 248 LSSYNQQTIKKKRRS-LEIHFITVGERGIVRMWNADSACLYEQKSSDVTISF------EM 300
+S TIK +S LE I G G V D + SSD T+ EM
Sbjct: 218 VSGLRDNTIKIWDKSTLECKRILTGHTGSVLCLQYDERVIITG-SSDSTVRVWDVNTGEM 276
Query: 301 DDSKRGFTAATV-LPSNQGLLCVTADQQLLLYTTVEVPEKKMELILSKRLVGYNEEILDL 359
++ A + L N G++ + + + + P ++ L + LVG+ + +
Sbjct: 277 LNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAVWDMASPT---DITLRRVLVGHRAAVNVV 333
Query: 360 KFLGEEEQYLAVATNIEQVQVYDLSSMSCSYV--LAGHSEIVLCLDTCALSSGKILIVTG 417
F +++Y+ A+ ++V++ S+ C +V L GH + CL L+V+G
Sbjct: 334 DF---DDKYIVSASGDRTIKVWNTST--CEFVRTLNGHKRGIACLQY-----RDRLVVSG 383
Query: 418 SKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDD 477
S DN++RLWD E C+ V GH V + F K +VSG+ D IKVW D
Sbjct: 384 SSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKR---IVSGAYDGKIKVWDLIAALDP 440
Query: 478 AEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVW 521
L + +V G+ + L ++ + + S D T +W
Sbjct: 441 RAPAGTLCLRTLVEHSGR-VFRLQF--DEFQIVSSSHDDTILIW 481
Score = 167 (63.8 bits), Expect = 5.8e-09, P = 5.8e-09
Identities = 45/193 (23%), Positives = 85/193 (44%)
Query: 41 SINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKG 100
+I I D S K + G + ++ L L D++++ + +RVWD++T + L +
Sbjct: 225 TIKIWDKSTLECKRILTGHTGSV--LCLQYDERVIITGSSDSTVRVWDVNTGEMLNTLIH 282
Query: 101 HDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGF---CTHYFKGHKGVVSSILFHPDTD 157
H + + + G++ T DR + VWD+ GH+ V+ + D D
Sbjct: 283 HCEAVLHLRFN--NGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVV----DFD 336
Query: 158 KSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDL 217
+ S S D T++VW+ + V TL+ H + + ++S D + LWD+
Sbjct: 337 DKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYRD--RLVVSGSSDNTIRLWDI 394
Query: 218 RDYSCKLTVPTYE 230
+C + +E
Sbjct: 395 ECGACLRVLEGHE 407
Score = 145 (56.1 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 39/151 (25%), Positives = 69/151 (45%)
Query: 68 LSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVL 127
L DD+ + S I++WD STL+C R GH G + + ++ T +D V
Sbjct: 210 LQYDDQKIVSGLRDNTIKIWDKSTLECKRILTGHTGSVLCLQYDER--VIITGSSDSTVR 267
Query: 128 VWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKH 187
VWDV+ G + H V + F+ ++ + S D ++ VWD+ + + TL +
Sbjct: 268 VWDVNTGEMLNTLIHHCEAVLHLRFN----NGMMVTCSKDRSIAVWDMASPTDI-TLRRV 322
Query: 188 F--SRVTSMAITSDGSTLISAGRDKVVNLWD 216
R + D ++SA D+ + +W+
Sbjct: 323 LVGHRAAVNVVDFDDKYIVSASGDRTIKVWN 353
Score = 138 (53.6 bits), Expect = 8.4e-06, P = 8.4e-06
Identities = 35/150 (23%), Positives = 66/150 (44%)
Query: 505 NDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWS 564
+D + +G +D T +W L GH + +++ ++V+IT S D T+++W
Sbjct: 213 DDQKIVSGLRDNTIKIWDKSTLECKRILTGHTGSVLCLQYD--ERVIITGSSDSTVRVWD 270
Query: 565 ISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIA---TYDKHED 621
++ G L T H +VL F +V+C D + +W + + I H
Sbjct: 271 VNTGEMLNTLIHHCEAVLHLRF--NNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRA 328
Query: 622 KIWALAVGKKTEMFATGGSDALVNLWHDST 651
+ + K + A+G D + +W+ ST
Sbjct: 329 AVNVVDFDDKYIVSASG--DRTIKVWNTST 356
Score = 132 (51.5 bits), Expect = 3.8e-05, P = 3.8e-05
Identities = 35/134 (26%), Positives = 65/134 (48%)
Query: 365 EEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVR 424
++Q + ++++D S++ C +L GH+ VLCL + +I+TGS D++VR
Sbjct: 213 DDQKIVSGLRDNTIKIWDKSTLECKRILTGHTGSVLCLQY-----DERVIITGSSDSTVR 267
Query: 425 LWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNL 484
+WD + + H AV + F+ + +V+ S D +I VW D P ++
Sbjct: 268 VWDVNTGEMLNTLIHHCEAVLHLRFNNGM---MVTCSKDRSIAVW-------DMASPTDI 317
Query: 485 KAKAVVAAHGKDIN 498
+ V+ H +N
Sbjct: 318 TLRRVLVGHRAAVN 331
Score = 119 (46.9 bits), Expect = 0.00099, P = 0.00099
Identities = 68/304 (22%), Positives = 133/304 (43%)
Query: 199 DGSTLISAGRDKVVNLWDLRDYSCKLTVPTYEMVEAVC------AIPPGSAFDSFLSSYN 252
D ++S RD + +WD CK + T +C I GS+ DS + ++
Sbjct: 213 DDQKIVSGLRDNTIKIWDKSTLECK-RILTGHTGSVLCLQYDERVIITGSS-DSTVRVWD 270
Query: 253 QQTIKKKRRSLEIHFITV----GERGIVRMWNAD-SACLYEQKS-SDVTISFEMDDSKRG 306
T + +L H V G++ + D S +++ S +D+T+ + +
Sbjct: 271 VNT-GEMLNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHR-- 327
Query: 307 FTAATVLP-SNQGLLCVTADQQLLLYTTVEVPEKKMELILSKRLVGYNEEILDLKFLGEE 365
A V+ ++ ++ + D+ + ++ T E + + L G+ I L++
Sbjct: 328 -AAVNVVDFDDKYIVSASGDRTIKVWNT-----STCEFV--RTLNGHKRGIACLQY---R 376
Query: 366 EQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRL 425
++ + ++ ++++D+ +C VL GH E+V C+ + +I V+G+ D +++
Sbjct: 377 DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCI---RFDNKRI--VSGAYDGKIKV 431
Query: 426 WDS----ESRC-----CVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSD 476
WD + R C+ H G V + F + Q +VS S D TI +W F L+D
Sbjct: 432 WDLIAALDPRAPAGTLCLRTLVEHSGRVFRLQFDE-FQ--IVSSSHDDTILIWDF--LND 486
Query: 477 DAEQ 480
A Q
Sbjct: 487 PAAQ 490
>FB|FBgn0023423 [details] [associations]
symbol:slmb "supernumerary limbs" species:7227 "Drosophila
melanogaster" [GO:0045879 "negative regulation of smoothened
signaling pathway" evidence=IMP] [GO:0030111 "regulation of Wnt
receptor signaling pathway" evidence=IMP;TAS] [GO:0008588 "release
of cytoplasmic sequestered NF-kappaB" evidence=IMP;TAS] [GO:0008589
"regulation of smoothened signaling pathway" evidence=TAS]
[GO:0000151 "ubiquitin ligase complex" evidence=ISS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISS] [GO:0030512
"negative regulation of transforming growth factor beta receptor
signaling pathway" evidence=NAS] [GO:0030178 "negative regulation
of Wnt receptor signaling pathway" evidence=IMP;NAS] [GO:0019005
"SCF ubiquitin ligase complex" evidence=NAS;TAS] [GO:0006508
"proteolysis" evidence=IMP] [GO:0045475 "locomotor rhythm"
evidence=IMP] [GO:0007623 "circadian rhythm" evidence=IMP;IPI]
[GO:0007611 "learning or memory" evidence=IMP] [GO:0008355
"olfactory learning" evidence=IMP] [GO:0030162 "regulation of
proteolysis" evidence=TAS] [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0030708 "germarium-derived female
germ-line cyst encapsulation" evidence=IMP] [GO:0046843 "dorsal
appendage formation" evidence=IMP] [GO:0030720 "oocyte localization
involved in germarium-derived egg chamber formation" evidence=IMP]
[GO:0007088 "regulation of mitosis" evidence=IMP] [GO:0030727
"germarium-derived female germ-line cyst formation" evidence=IMP]
[GO:0045849 "negative regulation of nurse cell apoptotic process"
evidence=IMP] [GO:0030707 "ovarian follicle cell development"
evidence=IMP] [GO:0007293 "germarium-derived egg chamber formation"
evidence=IMP] [GO:0030713 "ovarian follicle cell stalk formation"
evidence=IMP] [GO:0007304 "chorion-containing eggshell formation"
evidence=IMP] [GO:0051219 "phosphoprotein binding" evidence=IPI]
[GO:0007298 "border follicle cell migration" evidence=IMP]
[GO:0046599 "regulation of centriole replication" evidence=IDA]
[GO:0060253 "negative regulation of glial cell proliferation"
evidence=IGI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00256 SMART:SM00320 SMART:SM01028 GO:GO:0007088
GO:GO:0008355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030162 GO:GO:0006508 SUPFAM:SSF81383 GO:GO:0007298
GO:GO:0045475 GO:GO:0019005 GO:GO:0004842 GO:GO:0030178
GO:GO:0046843 GO:GO:0030720 GO:GO:0030713 GO:GO:0030512
GO:GO:0030727 GO:GO:0030708 GO:GO:0008588 GO:GO:0045879
GO:GO:0046599 HSSP:Q9Y297 GO:GO:0060253 EMBL:AF032878
ProteinModelPortal:O44382 SMR:O44382 IntAct:O44382 STRING:O44382
PaxDb:O44382 PRIDE:O44382 FlyBase:FBgn0023423 HOGENOM:HOG000102803
InParanoid:O44382 OrthoDB:EOG4S7H55 ArrayExpress:O44382 Bgee:O44382
GO:GO:0045849 Uniprot:O44382
Length = 510
Score = 265 (98.3 bits), Expect = 9.1e-20, P = 9.1e-20
Identities = 69/233 (29%), Positives = 120/233 (51%)
Query: 395 HSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQ 454
+S+ V CL GKI V+G +DN++++WD CV GH G+V + + K+
Sbjct: 209 NSKGVYCLQ---YDDGKI--VSGLRDNTIKIWDRTDLQCVKTLMGHTGSVLCLQYDDKV- 262
Query: 455 NFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQ 514
++SGSSD T++VW + + +N + H + + L N+ ++ T S+
Sbjct: 263 --IISGSSDSTVRVWDVN-----TGEMVN-----TLIHHCEAVLHLRF--NNGMMVTCSK 308
Query: 515 DRTACVWRLPDLVSVVTFR----GHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSC 570
DR+ VW + S +T R GH+ + V+F ++ +++ASGD+TIK+WS S
Sbjct: 309 DRSIAVWDMTS-PSEITLRRVLVGHRAAVNVVDFD--EKYIVSASGDRTIKVWSTSTCEF 365
Query: 571 LKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKI 623
++T GH + A R +VS +D ++LW + G C+ + HE+ +
Sbjct: 366 VRTLNGHKRGI--ACLQYRDRLVVSGSSDNSIRLWDIECGACLRVLEGHEELV 416
Score = 246 (91.7 bits), Expect = 1.2e-17, P = 1.2e-17
Identities = 71/252 (28%), Positives = 122/252 (48%)
Query: 405 CALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDH 464
C K+ I++GS D++VR+WD + V H AV + F+ + +V+ S D
Sbjct: 255 CLQYDDKV-IISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFNNGM---MVTCSKDR 310
Query: 465 TIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLP 524
+I VW D P + + V+ H +N V ++ + + S DRT VW
Sbjct: 311 SIAVW-------DMTSPSEITLRRVLVGHRAAVN--VVDFDEKYIVSASGDRTIKVWSTS 361
Query: 525 DLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRA 584
V T GHKRGI +++ D++V++ S D +I++W I G+CL+ EGH V
Sbjct: 362 TCEFVRTLNGHKRGIACLQYR--DRLVVSGSSDNSIRLWDIECGACLRVLEGHEELVRCI 419
Query: 585 SFLTRGAQIVSCGADGLVKLWTV------RTGE---CIATYDKHEDKIWALAVGKKTEMF 635
F T+ +IVS DG +K+W + R C+ T +H +++ L + ++
Sbjct: 420 RFDTK--RIVSGAYDGKIKVWDLVAALDPRAASNTLCLNTLVEHTGRVFRLQFDE-FQIV 476
Query: 636 ATGGSDALVNLW 647
++ D ++ +W
Sbjct: 477 SSSHDDTIL-IW 487
Score = 208 (78.3 bits), Expect = 1.9e-13, P = 1.9e-13
Identities = 55/206 (26%), Positives = 102/206 (49%)
Query: 29 SDGSFIACACGESINIVDLSNAS---IKSTIEGGSDTITALALSPDDKLLFSSGHSREIR 85
++G + C+ SI + D+++ S ++ + G + + D+K + S+ R I+
Sbjct: 299 NNGMMVTCSKDRSIAVWDMTSPSEITLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIK 356
Query: 86 VWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGA-DRKVLVWDVDGGFCTHYFKGHK 144
VW ST + +R+ GH G+AC L +G+ D + +WD++ G C +GH+
Sbjct: 357 VWSTSTCEFVRTLNGHKR---GIACLQYRDRLVVSGSSDNSIRLWDIECGACLRVLEGHE 413
Query: 145 GVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKK---------CVATLDKHFSRVTSMA 195
+V I F DT + + SG+ D ++VWDL+A C+ TL +H RV +
Sbjct: 414 ELVRCIRF--DTKR--IVSGAYDGKIKVWDLVAALDPRAASNTLCLNTLVEHTGRVFRLQ 469
Query: 196 ITSDGSTLISAGRDKVVNLWDLRDYS 221
D ++S+ D + +WD +++
Sbjct: 470 F--DEFQIVSSSHDDTILIWDFLNFT 493
Score = 179 (68.1 bits), Expect = 2.9e-10, P = 2.9e-10
Identities = 48/204 (23%), Positives = 90/204 (44%)
Query: 30 DGSFIACACGESINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWDL 89
DG ++ +I I D ++ T+ G + ++ L L DDK++ S +RVWD+
Sbjct: 220 DGKIVSGLRDNTIKIWDRTDLQCVKTLMGHTGSV--LCLQYDDKVIISGSSDSTVRVWDV 277
Query: 90 STLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGF---CTHYFKGHKGV 146
+T + + + H + + + G++ T DR + VWD+ GH+
Sbjct: 278 NTGEMVNTLIHHCEAVLHLRFN--NGMMVTCSKDRSIAVWDMTSPSEITLRRVLVGHRAA 335
Query: 147 VSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISA 206
V+ + D D+ + S S D T++VW + V TL+ H + + ++S
Sbjct: 336 VNVV----DFDEKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYRD--RLVVSG 389
Query: 207 GRDKVVNLWDLRDYSCKLTVPTYE 230
D + LWD+ +C + +E
Sbjct: 390 SSDNSIRLWDIECGACLRVLEGHE 413
Score = 175 (66.7 bits), Expect = 7.8e-10, P = 7.8e-10
Identities = 75/284 (26%), Positives = 120/284 (42%)
Query: 248 LSSYNQQTIKK-KRRSLEIHFITVGERGIVRMWNADSACLYEQKSSDVTISF------EM 300
+S TIK R L+ +G G V D + SSD T+ EM
Sbjct: 224 VSGLRDNTIKIWDRTDLQCVKTLMGHTGSVLCLQYDDKVIISG-SSDSTVRVWDVNTGEM 282
Query: 301 DDSKRGFTAATV-LPSNQGLLCVTADQQLLLYTTVEVPEKKMELILSKRLVGYNEEILDL 359
++ A + L N G++ + + + + P E+ L + LVG+ + +
Sbjct: 283 VNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAVWDMTSPS---EITLRRVLVGHRAAVNVV 339
Query: 360 KFLGEEEQYLAVATNIEQVQVYDLSSMSCSYV--LAGHSEIVLCLDTCALSSGKILIVTG 417
F +E+Y+ A+ ++V+ S+ +C +V L GH + CL L+V+G
Sbjct: 340 DF---DEKYIVSASGDRTIKVW--STSTCEFVRTLNGHKRGIACLQY-----RDRLVVSG 389
Query: 418 SKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDD 477
S DNS+RLWD E C+ V GH V + F K +VSG+ D IKVW D
Sbjct: 390 SSDNSIRLWDIECGACLRVLEGHEELVRCIRFDTKR---IVSGAYDGKIKVWDLVAALDP 446
Query: 478 AEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVW 521
L +V G+ + L ++ + + S D T +W
Sbjct: 447 RAASNTLCLNTLVEHTGR-VFRLQF--DEFQIVSSSHDDTILIW 487
Score = 148 (57.2 bits), Expect = 7.0e-07, P = 7.0e-07
Identities = 36/117 (30%), Positives = 59/117 (50%)
Query: 535 HKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIV 594
+ +G++ +++ D +++ D TIKIW +D C+KT GHT SVL + + I+
Sbjct: 209 NSKGVYCLQYD--DGKIVSGLRDNTIKIWDRTDLQCVKTLMGHTGSVLCLQYDDK--VII 264
Query: 595 SCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLWHDST 651
S +D V++W V TGE + T H + + L M T D + +W D T
Sbjct: 265 SGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFNNG--MMVTCSKDRSIAVW-DMT 318
Score = 132 (51.5 bits), Expect = 3.9e-05, P = 3.9e-05
Identities = 35/150 (23%), Positives = 68/150 (45%)
Query: 68 LSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVL 127
L DD + S I++WD + L+C+++ GH G + + ++ + +D V
Sbjct: 216 LQYDDGKIVSGLRDNTIKIWDRTDLQCVKTLMGHTGSVLCLQYDDK--VIISGSSDSTVR 273
Query: 128 VWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKH 187
VWDV+ G + H V + F+ ++ + S D ++ VWD+ + + TL +
Sbjct: 274 VWDVNTGEMVNTLIHHCEAVLHLRFN----NGMMVTCSKDRSIAVWDMTSPSEI-TLRRV 328
Query: 188 F--SRVTSMAITSDGSTLISAGRDKVVNLW 215
R + D ++SA D+ + +W
Sbjct: 329 LVGHRAAVNVVDFDEKYIVSASGDRTIKVW 358
Score = 129 (50.5 bits), Expect = 8.2e-05, P = 8.2e-05
Identities = 59/244 (24%), Positives = 108/244 (44%)
Query: 107 GMAC-HPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGS 165
G+ C G + + D + +WD C GH G V + + D ++ SGS
Sbjct: 212 GVYCLQYDDGKIVSGLRDNTIKIWDRTDLQCVKTLMGHTGSVLCLQY----DDKVIISGS 267
Query: 166 DDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLT 225
D+TVRVWD+ + V TL H V + + +++ +D+ + +WD+ S ++T
Sbjct: 268 SDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFNN--GMMVTCSKDRSIAVWDMTSPS-EIT 324
Query: 226 VPTYEMVEAVCAIPPGSAFDSFL-SSYNQQTIKKKRRSLEIHFI-TVG--ERGIVRMWNA 281
+ +V A+ + ++ S+ +TIK S F+ T+ +RGI +
Sbjct: 325 LRRV-LVGHRAAVNVVDFDEKYIVSASGDRTIKVWSTST-CEFVRTLNGHKRGIACLQYR 382
Query: 282 DSACLYEQKSSDVTISFEMDDSKRGFTAATVLPSNQGLL-CVTADQQLLLYTTVEVPEKK 340
D L SSD +I + D + G VL ++ L+ C+ D + ++ + K
Sbjct: 383 DR--LVVSGSSDNSI--RLWDIECG-ACLRVLEGHEELVRCIRFDTKRIVSGAYDGKIKV 437
Query: 341 MELI 344
+L+
Sbjct: 438 WDLV 441
Score = 126 (49.4 bits), Expect = 0.00017, P = 0.00017
Identities = 45/162 (27%), Positives = 66/162 (40%)
Query: 26 VVSSDGSFIACACGE-SINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREI 84
VV D +I A G+ +I + S T+ G I L D+L+ S I
Sbjct: 338 VVDFDEKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYR--DRLVVSGSSDNSI 395
Query: 85 RVWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGA-DRKVLVWDV---------DGG 134
R+WD+ CLR +GH+ + C +GA D K+ VWD+
Sbjct: 396 RLWDIECGACLRVLEGHEEL---VRCIRFDTKRIVSGAYDGKIKVWDLVAALDPRAASNT 452
Query: 135 FCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLL 176
C + H G V + F D+ + S S D T+ +WD L
Sbjct: 453 LCLNTLVEHTGRVFRLQF----DEFQIVSSSHDDTILIWDFL 490
Score = 121 (47.7 bits), Expect = 0.00061, P = 0.00061
Identities = 67/288 (23%), Positives = 126/288 (43%)
Query: 311 TVLPSNQGLLCVTADQQLLLY----TTVEVPEKKM-ELILSKRLVGYNEEILDLKFLGEE 365
T++ +LC+ D ++++ +TV V + E++ L+ + E +L L+F
Sbjct: 245 TLMGHTGSVLCLQYDDKVIISGSSDSTVRVWDVNTGEMV--NTLIHHCEAVLHLRF---N 299
Query: 366 EQYLAVATNIEQVQVYDLSSMS---CSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNS 422
+ + + V+D++S S VL GH V +D + IV+ S D +
Sbjct: 300 NGMMVTCSKDRSIAVWDMTSPSEITLRRVLVGHRAAVNVVDF-----DEKYIVSASGDRT 354
Query: 423 VRLWDSESRC-CVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQP 481
+++W S S C V GH + + + +L +VSGSSD++I++W D E
Sbjct: 355 IKVW-STSTCEFVRTLNGHKRGIACLQYRDRL---VVSGSSDNSIRLW-------DIECG 403
Query: 482 MNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRL-----PDLVS----VVTF 532
L+ V+ H + + + + + +G+ D VW L P S + T
Sbjct: 404 ACLR---VLEGHEELVRCIRF--DTKRIVSGAYDGKIKVWDLVAALDPRAASNTLCLNTL 458
Query: 533 RGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSS 580
H ++ ++F ++++S D TI IW + + + G T S
Sbjct: 459 VEHTGRVFRLQFDEFQ--IVSSSHDDTILIWDFLNFTPNENKTGRTPS 504
>ASPGD|ASPL0000042645 [details] [associations]
symbol:AN1468 species:162425 "Emericella nidulans"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005829 "cytosol"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:BN001307 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 InterPro:IPR027106 PANTHER:PTHR19846
EMBL:AACD01000022 InterPro:IPR014906 Pfam:PF08799
HOGENOM:HOG000157615 KO:K12662 OMA:CKIWDLR OrthoDB:EOG4V1B90
RefSeq:XP_659072.1 ProteinModelPortal:Q5BDB2 SMR:Q5BDB2
STRING:Q5BDB2 EnsemblFungi:CADANIAT00008085 GeneID:2875152
KEGG:ani:AN1468.2 Uniprot:Q5BDB2
Length = 521
Score = 201 (75.8 bits), Expect = 9.2e-20, Sum P(2) = 9.2e-20
Identities = 69/252 (27%), Positives = 106/252 (42%)
Query: 18 QFYGGGPLVV---SSDGSFIACA-CGESINIVDLSNASIKSTIEGGSDTITALALSPDDK 73
Q G P+ + + DG IA G I ++ + N K +++G +D + L+ P
Sbjct: 193 QIAGDRPVSICRFAPDGQTIATGNWGGGIRLLGVPNLEEKLSVKGHTDRVGGLSWFPGAT 252
Query: 74 L-----------LFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGA 122
L S G + +W L + L + +GH G HPSG +A+A
Sbjct: 253 LPESNVSESAVNFVSGGGEGNVCLWSLDKDQPLATLEGHSGRVCRTEFHPSGKYIASASY 312
Query: 123 DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVA 182
D +WDV+ +GH V ++ F+ D SLL SG D+ RVWDL + V
Sbjct: 313 DTTWRLWDVETTAELQLQEGHSREVYTVAFN--NDGSLLASGGLDSIGRVWDLRTGRTVM 370
Query: 183 TLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYEMVEAVCAIPPGS 242
L+ H + + DG ++S D V WDLR + ++ V + GS
Sbjct: 371 ILEGHIREIFGLDWGVDGYRVLSGSGDGWVKCWDLRQVKNTGGIGAHKSVVSDVRWYKGS 430
Query: 243 AFDSFLSSYNQQ 254
SFL + Q
Sbjct: 431 ESASFLPTTEGQ 442
Score = 178 (67.7 bits), Expect = 3.8e-10, P = 3.8e-10
Identities = 46/176 (26%), Positives = 77/176 (43%)
Query: 483 NLKAKAVVAAHGKDINSLAVAP---------NDSLV--CTGSQDRTACVWRLPDLVSVVT 531
NL+ K V H + L+ P ++S V +G + C+W L + T
Sbjct: 228 NLEEKLSVKGHTDRVGGLSWFPGATLPESNVSESAVNFVSGGGEGNVCLWSLDKDQPLAT 287
Query: 532 FRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGA 591
GH + EF P + + +AS D T ++W + + L+ EGH+ V +F G+
Sbjct: 288 LEGHSGRVCRTEFHPSGKYIASASYDTTWRLWDVETTAELQLQEGHSREVYTVAFNNDGS 347
Query: 592 QIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLW 647
+ S G D + ++W +RTG + + H +I+ L G +G D V W
Sbjct: 348 LLASGGLDSIGRVWDLRTGRTVMILEGHIREIFGLDWGVDGYRVLSGSGDGWVKCW 403
Score = 152 (58.6 bits), Expect = 2.4e-14, Sum P(2) = 2.4e-14
Identities = 47/183 (25%), Positives = 75/183 (40%)
Query: 47 LSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAI 106
L N + + G ++ +PD + + + IR+ + L+ S KGH
Sbjct: 184 LHNFDLYGSQIAGDRPVSICRFAPDGQTIATGNWGGGIRLLGVPNLEEKLSVKGHTDRVG 243
Query: 107 GMACHPSGGL-----------LATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPD 155
G++ P L + G + V +W +D +GH G V FHP
Sbjct: 244 GLSWFPGATLPESNVSESAVNFVSGGGEGNVCLWSLDKDQPLATLEGHSGRVCRTEFHPS 303
Query: 156 TDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLW 215
+ S S D T R+WD+ + + H V ++A +DGS L S G D + +W
Sbjct: 304 G--KYIASASYDTTWRLWDVETTAELQLQEGHSREVYTVAFNNDGSLLASGGLDSIGRVW 361
Query: 216 DLR 218
DLR
Sbjct: 362 DLR 364
Score = 146 (56.5 bits), Expect = 2.7e-08, Sum P(2) = 2.7e-08
Identities = 49/215 (22%), Positives = 87/215 (40%)
Query: 405 CALSSGKILIVTGSKDNSVRLW---DSESRCCVGVGTGHMGAV----GAVA----FSKKL 453
C + I TG+ +RL + E + V T +G + GA S+
Sbjct: 203 CRFAPDGQTIATGNWGGGIRLLGVPNLEEKLSVKGHTDRVGGLSWFPGATLPESNVSESA 262
Query: 454 QNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGS 513
NF VSG + + +WS D +QP+ A + H + P+ + + S
Sbjct: 263 VNF-VSGGGEGNVCLWSLD-----KDQPL-----ATLEGHSGRVCRTEFHPSGKYIASAS 311
Query: 514 QDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKT 573
D T +W + + GH R +++V F+ ++ + D ++W + G +
Sbjct: 312 YDTTWRLWDVETTAELQLQEGHSREVYTVAFNNDGSLLASGGLDSIGRVWDLRTGRTVMI 371
Query: 574 FEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVR 608
EGH + + G +++S DG VK W +R
Sbjct: 372 LEGHIREIFGLDWGVDGYRVLSGSGDGWVKCWDLR 406
Score = 144 (55.7 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 37/167 (22%), Positives = 72/167 (43%)
Query: 492 AHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSP----- 546
A + ++ AP+ + TG+ + +P+L ++ +GH + + + P
Sbjct: 195 AGDRPVSICRFAPDGQTIATGNWGGGIRLLGVPNLEEKLSVKGHTDRVGGLSWFPGATLP 254
Query: 547 ----VDQVV--ITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADG 600
+ V ++ G+ + +WS+ L T EGH+ V R F G I S D
Sbjct: 255 ESNVSESAVNFVSGGGEGNVCLWSLDKDQPLATLEGHSGRVCRTEFHPSGKYIASASYDT 314
Query: 601 LVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLW 647
+LW V T + + H +++ +A + A+GG D++ +W
Sbjct: 315 TWRLWDVETTAELQLQEGHSREVYTVAFNNDGSLLASGGLDSIGRVW 361
Score = 114 (45.2 bits), Expect = 9.2e-20, Sum P(2) = 9.2e-20
Identities = 24/55 (43%), Positives = 31/55 (56%)
Query: 554 ASG-DKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTV 607
+SG DK + I+S D S +KT GH+ +VL A I SCG D VKLW +
Sbjct: 466 SSGFDKNVNIFSADDWSLIKTLSGHSGNVLSADISNNAQWIASCGHDRTVKLWGI 520
Score = 110 (43.8 bits), Expect = 8.9e-10, Sum P(2) = 8.9e-10
Identities = 47/192 (24%), Positives = 80/192 (41%)
Query: 31 GSFIACACGESI-NIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWDL 89
G +IA A ++ + D+ + EG S + +A + D LL S G RVWDL
Sbjct: 304 GKYIASASYDTTWRLWDVETTAELQLQEGHSREVYTVAFNNDGSLLASGGLDSIGRVWDL 363
Query: 90 STLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSS 149
T + + +GH G+ G + + D V WD+ T HK VVS
Sbjct: 364 RTGRTVMILEGHIREIFGLDWGVDGYRVLSGSGDGWVKCWDLRQVKNTGGIGAHKSVVSD 423
Query: 150 ILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRD 209
+ ++ ++ + ++ R+ D+ A + S G+ +S+G D
Sbjct: 424 VRWYKGSESASFLPTTEGQPGRM-DV--DGATAPVQPRKS----------GTFFVSSGFD 470
Query: 210 KVVNLWDLRDYS 221
K VN++ D+S
Sbjct: 471 KNVNIFSADDWS 482
Score = 81 (33.6 bits), Expect = 1.8e-06, Sum P(3) = 1.8e-06
Identities = 29/121 (23%), Positives = 56/121 (46%)
Query: 349 LVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALS 408
L G++ + +F +Y+A A+ +++D+ + + + GHS V T A +
Sbjct: 288 LEGHSGRVCRTEF-HPSGKYIASASYDTTWRLWDVETTAELQLQEGHSREVY---TVAFN 343
Query: 409 SGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKV 468
+ L+ +G D+ R+WD + V + GH+ + + + L SGS D +K
Sbjct: 344 NDGSLLASGGLDSIGRVWDLRTGRTVMILEGHIREIFGLDWGVDGYRVL-SGSGDGWVKC 402
Query: 469 W 469
W
Sbjct: 403 W 403
Score = 72 (30.4 bits), Expect = 5.4e-10, Sum P(2) = 5.4e-10
Identities = 42/198 (21%), Positives = 82/198 (41%)
Query: 351 GYNEEILDLKFLGEEEQYLAVATNIEQV-QVYDLSSMSCSYVLAGHSEIVLCLDTCALSS 409
G++ E+ + F + L + ++ + +V+DL + +L GH + LD +
Sbjct: 332 GHSREVYTVAF--NNDGSLLASGGLDSIGRVWDLRTGRTVMILEGHIREIFGLDW-GVDG 388
Query: 410 GKILIVTGSKDNSVRLWD-SESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKV 468
++L +GS D V+ WD + + G+G H V V + K ++ +++
Sbjct: 389 YRVL--SGSGDGWVKCWDLRQVKNTGGIGA-HKSVVSDVRWYKGSESASFLPTTEGQPGR 445
Query: 469 WSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGS-QDRTACVWRLPDLV 527
DG + QP V + K++N + A + SL+ T S + +
Sbjct: 446 MDVDGATAPV-QPRKSGTFFVSSGFDKNVNIFS-ADDWSLIKTLSGHSGNVLSADISNNA 503
Query: 528 SVVTFRGHKRGI--WSVE 543
+ GH R + W +E
Sbjct: 504 QWIASCGHDRTVKLWGIE 521
Score = 68 (29.0 bits), Expect = 5.6e-15, Sum P(2) = 5.6e-15
Identities = 13/51 (25%), Positives = 24/51 (47%)
Query: 515 DRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSI 565
D+ ++ D + T GH + S + S Q + + D+T+K+W I
Sbjct: 470 DKNVNIFSADDWSLIKTLSGHSGNVLSADISNNAQWIASCGHDRTVKLWGI 520
Score = 62 (26.9 bits), Expect = 2.4e-14, Sum P(2) = 2.4e-14
Identities = 15/58 (25%), Positives = 23/58 (39%)
Query: 590 GAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLW 647
G VS G D V +++ I T H + + + + A+ G D V LW
Sbjct: 461 GTFFVSSGFDKNVNIFSADDWSLIKTLSGHSGNVLSADISNNAQWIASCGHDRTVKLW 518
Score = 38 (18.4 bits), Expect = 1.8e-06, Sum P(3) = 1.8e-06
Identities = 6/18 (33%), Positives = 12/18 (66%)
Query: 265 IHFITVGERGIVRMWNAD 282
++F++ G G V +W+ D
Sbjct: 263 VNFVSGGGEGNVCLWSLD 280
>UNIPROTKB|O14727 [details] [associations]
symbol:APAF1 "Apoptotic protease-activating factor 1"
species:9606 "Homo sapiens" [GO:0006952 "defense response"
evidence=IEA] [GO:0043531 "ADP binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0042802 "identical protein binding"
evidence=IEA] [GO:0051402 "neuron apoptotic process" evidence=IEA]
[GO:0001843 "neural tube closure" evidence=IEA] [GO:0006309
"apoptotic DNA fragmentation" evidence=IEA] [GO:0030900 "forebrain
development" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0000166 "nucleotide binding" evidence=TAS]
[GO:0008656 "cysteine-type endopeptidase activator activity
involved in apoptotic process" evidence=NAS] [GO:0008635
"activation of cysteine-type endopeptidase activity involved in
apoptotic process by cytochrome c" evidence=IDA;TAS] [GO:0042981
"regulation of apoptotic process" evidence=TAS] [GO:0043293
"apoptosome" evidence=IDA;TAS] [GO:0006919 "activation of
cysteine-type endopeptidase activity involved in apoptotic process"
evidence=IDA] [GO:0097193 "intrinsic apoptotic signaling pathway"
evidence=TAS] [GO:0007399 "nervous system development"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0006915
"apoptotic process" evidence=TAS] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005794 "Golgi apparatus"
evidence=IDA] Reactome:REACT_578 InterPro:IPR017986
InterPro:IPR000767 InterPro:IPR001315 InterPro:IPR001680
InterPro:IPR002182 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00619
Pfam:PF00931 PRINTS:PR00364 PROSITE:PS50082 PROSITE:PS50209
PROSITE:PS50294 SMART:SM00320 GO:GO:0005524 GO:GO:0005634
GO:GO:0005794 Pathway_Interaction_DB:p75ntrpathway GO:GO:0007399
GO:GO:0006952 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0000166 DrugBank:DB00171 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030900 GO:GO:0051402
Pathway_Interaction_DB:caspase_pathway EMBL:CH471054 GO:GO:0043531
GO:GO:0001843 GO:GO:0097193 GO:GO:0006309 GO:GO:0008656
GO:GO:0008635 Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986
OrthoDB:EOG43TZTP GO:GO:0043293 EMBL:AF013263 EMBL:AJ243003
EMBL:AJ243004 EMBL:AJ243005 EMBL:AJ243006 EMBL:AJ243007
EMBL:AJ243008 EMBL:AJ243009 EMBL:AJ243010 EMBL:AJ243011
EMBL:AJ243048 EMBL:AJ243107 EMBL:AF134397 EMBL:AF149794
EMBL:AB007873 EMBL:AB103079 EMBL:BC136531 EMBL:BC136532
EMBL:AJ133643 EMBL:AJ133644 EMBL:AJ133645 EMBL:AF248734
IPI:IPI00023630 IPI:IPI00217460 IPI:IPI00217461 IPI:IPI00217462
IPI:IPI00217463 IPI:IPI00375875 PIR:T03818 RefSeq:NP_001151.1
RefSeq:NP_037361.1 RefSeq:NP_863651.1 RefSeq:NP_863658.1
RefSeq:NP_863659.1 UniGene:Hs.552567 PDB:1C15 PDB:1CWW PDB:1CY5
PDB:1Z6T PDB:2P1H PDB:2YGS PDB:3IZA PDB:3YGS PDBsum:1C15
PDBsum:1CWW PDBsum:1CY5 PDBsum:1Z6T PDBsum:2P1H PDBsum:2YGS
PDBsum:3IZA PDBsum:3YGS ProteinModelPortal:O14727 SMR:O14727
DIP:DIP-27624N IntAct:O14727 MINT:MINT-96751 STRING:O14727
PhosphoSite:O14727 PaxDb:O14727 PRIDE:O14727
Ensembl:ENST00000333991 Ensembl:ENST00000357310
Ensembl:ENST00000359972 Ensembl:ENST00000547045
Ensembl:ENST00000550527 Ensembl:ENST00000551964
Ensembl:ENST00000552268 GeneID:317 KEGG:hsa:317 UCSC:uc001tfy.3
UCSC:uc001tfz.3 UCSC:uc001tga.3 UCSC:uc001tgb.3 UCSC:uc001tgc.3
CTD:317 GeneCards:GC12P099039 HGNC:HGNC:576 HPA:HPA031373
MIM:602233 neXtProt:NX_O14727 PharmGKB:PA24868 HOVERGEN:HBG018730
InParanoid:O14727 KO:K02084 OMA:KVCKNSA PhylomeDB:O14727
Pathway_Interaction_DB:hivnefpathway BindingDB:O14727
ChEMBL:CHEMBL1795093 EvolutionaryTrace:O14727 GenomeRNAi:317
NextBio:1287 PMAP-CutDB:O14727 ArrayExpress:O14727 Bgee:O14727
Genevestigator:O14727 GermOnline:ENSG00000120868 InterPro:IPR017251
PIRSF:PIRSF037646 Uniprot:O14727
Length = 1248
Score = 272 (100.8 bits), Expect = 9.4e-20, P = 9.4e-20
Identities = 142/624 (22%), Positives = 263/624 (42%)
Query: 28 SSDGSFIA-CACGESINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRV 86
S DG IA C +++ + I+ D + A S DD+ + + +++++
Sbjct: 624 SEDGQRIASCGADKTLQVFKAETGEKLLEIKAHEDEVLCCAFSTDDRFIATCSVDKKVKI 683
Query: 87 WDLSTLKCLRSWKGHDGPAIGMACHPSGG----LLATAGADRKVLVWDVDGGFCTHYFKG 142
W+ T + + ++ H CH + LLAT +D + +WD++ C + G
Sbjct: 684 WNSMTGELVHTYDEHSEQV--NCCHFTNSSHHLLLATGSSDCFLKLWDLNQKECRNTMFG 741
Query: 143 HKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLA---KKCVATLDKHFSRVTS----MA 195
H V+ F PD DK LL S S D T+++WD + +K + + + F + M
Sbjct: 742 HTNSVNHCRFSPD-DK-LLASCSADGTLKLWDATSANERKSI-NVKQFFLNLEDPQEDME 798
Query: 196 I-------TSDGSTLISAGRDKVVNLWDLRDYSCKLTVPT-YEMVEAVCAIPPGSAFDSF 247
+ ++DG+ ++ A ++K+ L+D+ + T + C P +
Sbjct: 799 VIVKCCSWSADGARIMVAAKNKIF-LFDIHTSGLLGEIHTGHHSTIQYCDFSPQNHLAVV 857
Query: 248 -LSSYNQQTIKKKRRS--LEIHFITVGERGIVRMWNADSACLYEQKSSDVTISFEMDDSK 304
LS Y + RS + G+ M++ D + + S D TI + K
Sbjct: 858 ALSQYCVELWNTDSRSKVADCRGHLSWVHGV--MFSPDGSS-FLTSSDDQTIRL-WETKK 913
Query: 305 RGFTAATVLPSNQGLLCVTADQQLLLYTTVEVPEKKMELILSKR-LVGY-NEEILDLKFL 362
+A +L Q + V + ++++ + ++++LI + + Y E + L
Sbjct: 914 VCKNSAVML--KQEVDVVFQENEVMVLAVDHI--RRLQLINGRTGQIDYLTEAQVSCCCL 969
Query: 363 GEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNS 422
QY+A +++ +L + H + V + A K LI + S D
Sbjct: 970 SPHLQYIAFGDENGAIEILELVNNRIFQSRFQHKKTVWHIQFTA--DEKTLI-SSSDDAE 1026
Query: 423 VRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPM 482
+++W+ + C+ + GH V K + L+S S D T+KVW+ ++ + E+
Sbjct: 1027 IQVWNWQLDKCIFL-RGHQETVKDFRLLKNSR--LLSWSFDGTVKVWNI--ITGNKEKDF 1081
Query: 483 NLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSV 542
H + S ++ + + + S D+TA +W L+ + RGH +
Sbjct: 1082 --------VCHQGTVLSCDISHDATKFSSTSADKTAKIWSFDLLLPLHELRGHNGCVRCS 1133
Query: 543 EFSPVDQVVITASGDKT--IKIWSISDGSCLK-----TFEG---HTSSVLRASFLTRGAQ 592
FS VD ++ A+GD I+IW++S+G L + EG H V F G
Sbjct: 1134 AFS-VDSTLL-ATGDDNGEIRIWNVSNGELLHLCAPLSEEGAATHGGWVTDLCFSPDGKM 1191
Query: 593 IVSCGADGLVKLWTVRTGECIATY 616
++S G G +K W V TGE T+
Sbjct: 1192 LISAG--GYIKWWNVVTGESSQTF 1213
Score = 188 (71.2 bits), Expect = 3.4e-17, Sum P(2) = 3.4e-17
Identities = 53/207 (25%), Positives = 87/207 (42%)
Query: 12 CEPVLQQFYGGGPLVVSS--DGSFIACACGESINIVDLSNASIKSTIEGGSDTITALALS 69
CEP + Y L D + E IN +++N S + + +D + S
Sbjct: 569 CEPETSEVYQQAKLQAKQEVDNGMLYL---EWINKKNITNLS-RLVVRPHTDAVYHACFS 624
Query: 70 PDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVW 129
D + + S G + ++V+ T + L K H+ + A +AT D+KV +W
Sbjct: 625 EDGQRIASCGADKTLQVFKAETGEKLLEIKAHEDEVLCCAFSTDDRFIATCSVDKKVKIW 684
Query: 130 DVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFS 189
+ G H + H V+ F + LL +GS D +++WDL K+C T+ H +
Sbjct: 685 NSMTGELVHTYDEHSEQVNCCHFTNSSHHLLLATGSSDCFLKLWDLNQKECRNTMFGHTN 744
Query: 190 RVTSMAITSDGSTLISAGRDKVVNLWD 216
V + D L S D + LWD
Sbjct: 745 SVNHCRFSPDDKLLASCSADGTLKLWD 771
Score = 168 (64.2 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 36/123 (29%), Positives = 58/123 (47%)
Query: 527 VSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASF 586
+S + R H ++ FS Q + + DKT++++ G L + H VL +F
Sbjct: 606 LSRLVVRPHTDAVYHACFSEDGQRIASCGADKTLQVFKAETGEKLLEIKAHEDEVLCCAF 665
Query: 587 LTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTE--MFATGGSDALV 644
T I +C D VK+W TGE + TYD+H +++ + + ATG SD +
Sbjct: 666 STDDRFIATCSVDKKVKIWNSMTGELVHTYDEHSEQVNCCHFTNSSHHLLLATGSSDCFL 725
Query: 645 NLW 647
LW
Sbjct: 726 KLW 728
Score = 156 (60.0 bits), Expect = 3.2e-07, P = 3.2e-07
Identities = 45/168 (26%), Positives = 76/168 (45%)
Query: 440 HMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINS 499
H AV FS+ Q + S +D T++V+ ++ E+ + +KA H ++
Sbjct: 614 HTDAVYHACFSEDGQR-IASCGADKTLQVFK----AETGEKLLEIKA------HEDEVLC 662
Query: 500 LAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASG--D 557
A + +D + T S D+ +W V T+ H + F+ ++ A+G D
Sbjct: 663 CAFSTDDRFIATCSVDKKVKIWNSMTGELVHTYDEHSEQVNCCHFTNSSHHLLLATGSSD 722
Query: 558 KTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLW 605
+K+W ++ C T GHT+SV F + SC ADG +KLW
Sbjct: 723 CFLKLWDLNQKECRNTMFGHTNSVNHCRFSPDDKLLASCSADGTLKLW 770
Score = 114 (45.2 bits), Expect = 3.4e-17, Sum P(2) = 3.4e-17
Identities = 34/158 (21%), Positives = 63/158 (39%)
Query: 493 HGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVI 552
H K + + ++ + + S D VW L + RGH+ + ++ +
Sbjct: 1002 HKKTVWHIQFTADEKTLISSSDDAEIQVWNW-QLDKCIFLRGHQETVKDFRLLKNSRL-L 1059
Query: 553 TASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGEC 612
+ S D T+K+W+I G+ K F H +VL + S AD K+W+
Sbjct: 1060 SWSFDGTVKVWNIITGNKEKDFVCHQGTVLSCDISHDATKFSSTSADKTAKIWSFDLLLP 1119
Query: 613 IATYDKHEDKIWALAVGKKTEMFATGGSDALVNLWHDS 650
+ H + A + + ATG + + +W+ S
Sbjct: 1120 LHELRGHNGCVRCSAFSVDSTLLATGDDNGEIRIWNVS 1157
Score = 102 (41.0 bits), Expect = 6.1e-16, Sum P(2) = 6.1e-16
Identities = 48/178 (26%), Positives = 76/178 (42%)
Query: 469 WSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVS 528
WSFDG K K V G + S ++ + + + S D+TA +W L+
Sbjct: 1061 WSFDGTVKVWNIITGNKEKDFVCHQGT-VLSCDISHDATKFSSTSADKTAKIWSFDLLLP 1119
Query: 529 VVTFRGHKRGIWSVEFSPVDQVVITASGDKT--IKIWSISDGSCLKTFEGHTSSVL-RAS 585
+ RGH + FS VD ++ A+GD I+IW++S+G L H + L
Sbjct: 1120 LHELRGHNGCVRCSAFS-VDSTLL-ATGDDNGEIRIWNVSNGELL-----HLCAPLSEEG 1172
Query: 586 FLTRGAQIVS-C-GADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSD 641
T G + C DG K+ + G I K W + G+ ++ F T G++
Sbjct: 1173 AATHGGWVTDLCFSPDG--KM-LISAGGYI--------KWWNVVTGESSQTFYTNGTN 1219
Score = 102 (41.0 bits), Expect = 5.0e-08, Sum P(2) = 5.0e-08
Identities = 68/333 (20%), Positives = 123/333 (36%)
Query: 187 HFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYEMVEAVCAIPPGSAFDS 246
H V + DG + S G DK + ++ L + +E CA F +
Sbjct: 614 HTDAVYHACFSEDGQRIASCGADKTLQVFKAETGEKLLEIKAHEDEVLCCAFSTDDRFIA 673
Query: 247 FLSSYNQQTIKKKRRSLEIH-FITVGER-GIVRMWNADSACLYEQKSSDVTISF------ 298
S + I +H + E+ N+ L SSD +
Sbjct: 674 TCSVDKKVKIWNSMTGELVHTYDEHSEQVNCCHFTNSSHHLLLATGSSDCFLKLWDLNQK 733
Query: 299 EMDDSKRGFTAAT----VLPSNQGLLCVTADQQLLLYTTVEVPEKKMELILSKRLVGYNE 354
E ++ G T + P ++ L +AD L L+ E+K + + + + +
Sbjct: 734 ECRNTMFGHTNSVNHCRFSPDDKLLASCSADGTLKLWDATSANERK-SINVKQFFLNLED 792
Query: 355 EILDLKFLGEEEQYLAVATNI-----EQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSS 409
D++ + + + A I ++ ++D+ + + H+ + C S
Sbjct: 793 PQEDMEVIVKCCSWSADGARIMVAAKNKIFLFDIHTSGLLGEI--HTGHHSTIQYCDFSP 850
Query: 410 GKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVW 469
L V V LW+++SR V GH+ V V FS +FL S S D TI++W
Sbjct: 851 QNHLAVVALSQYCVELWNTDSRSKVADCRGHLSWVHGVMFSPDGSSFLTS-SDDQTIRLW 909
Query: 470 SFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAV 502
+ ++ + LK + V ++ LAV
Sbjct: 910 ETKKVCKNSA--VMLKQEVDVVFQENEVMVLAV 940
Score = 87 (35.7 bits), Expect = 2.2e-14, Sum P(2) = 2.2e-14
Identities = 48/249 (19%), Positives = 100/249 (40%)
Query: 405 CALSSGKILIVTGSKDNSVRLWDSESRCCVG-VGTGHMGAVGAVAFSKKLQNFL-VSGSS 462
C+ S+ I+ +K N + L+D + +G + TGH + FS QN L V S
Sbjct: 804 CSWSADGARIMVAAK-NKIFLFDIHTSGLLGEIHTGHHSTIQYCDFSP--QNHLAVVALS 860
Query: 463 DHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWR 522
+ +++W+ D S A+ H ++ + +P+ S T S D+T +W
Sbjct: 861 QYCVELWNTDSRSKVAD----------CRGHLSWVHGVMFSPDGSSFLTSSDDQTIRLWE 910
Query: 523 LPDLV--SVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSS 580
+ S V K+ + V F + +V+ + +++ + G E S
Sbjct: 911 TKKVCKNSAVML---KQEV-DVVFQENEVMVLAVDHIRRLQLINGRTGQIDYLTEAQVSC 966
Query: 581 VLRASFLTRGAQIVSCGAD-GLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGG 639
+ L Q ++ G + G +++ + + +H+ +W + + +
Sbjct: 967 CCLSPHL----QYIAFGDENGAIEILELVNNRIFQSRFQHKKTVWHIQFTADEKTLISSS 1022
Query: 640 SDALVNLWH 648
DA + +W+
Sbjct: 1023 DDAEIQVWN 1031
>POMBASE|SPCC5E4.03c [details] [associations]
symbol:taf5 "SAGA complex subunit/TATA-binding protein
associated factor/transcription factor TFIID complex subunit Taf5"
species:4896 "Schizosaccharomyces pombe" [GO:0000124 "SAGA complex"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005669 "transcription
factor TFIID complex" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006338 "chromatin remodeling" evidence=IC]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=IC] [GO:0016573 "histone
acetylation" evidence=IC] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 PomBase:SPCC5E4.03c
GO:GO:0005829 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:CU329672
GenomeReviews:CU329672_GR eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0016573 GO:GO:0006338 GO:GO:0000124
InterPro:IPR013720 Pfam:PF08513 GO:GO:0006367 GO:GO:0005669
KO:K03130 OMA:ERQNNQI HOGENOM:HOG000212424 EMBL:AB001372 PIR:T41454
RefSeq:NP_587902.1 ProteinModelPortal:O13282 IntAct:O13282
STRING:O13282 PRIDE:O13282 EnsemblFungi:SPCC5E4.03c.1
GeneID:2539353 KEGG:spo:SPCC5E4.03c OrthoDB:EOG4S1XG9
NextBio:20800518 Uniprot:O13282
Length = 643
Score = 264 (98.0 bits), Expect = 2.2e-19, P = 2.2e-19
Identities = 72/257 (28%), Positives = 111/257 (43%)
Query: 405 CA-LSSGKILIVTGSKDNSVRLW----DSES---RCCVGVGTG------HMGAVGAVAFS 450
CA S +I G +++ +RLW D +S V G H G V FS
Sbjct: 329 CAEFSPDSTMIACGFQESYIRLWSIKADKKSLPKSTSVEDSDGSVRLLSHSGPVYGTTFS 388
Query: 451 KKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVC 510
+L+S S D + ++WS D + A H + +A P
Sbjct: 389 PD-NKYLLSCSEDASARLWSVDTKT----------ALVAYKGHTGPVWDVAFGPFGHYFA 437
Query: 511 TGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSC 570
T S D+TA +W + + F GH + V F P V+T S DKT ++W + G
Sbjct: 438 TASHDQTAQLWSCDHIYPLRVFAGHLSDVDCVTFHPNSAYVLTGSSDKTCRLWDVHRGHS 497
Query: 571 LKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGK 630
++ F GHT V + G + S ++GL+ LW + TG I T H I++L+ +
Sbjct: 498 VRVFNGHTQPVTAVAIAPDGHTMASADSEGLIHLWDIGTGRRIKTMRGHRGNIYSLSFSR 557
Query: 631 KTEMFATGGSDALVNLW 647
++ + +GGSD V W
Sbjct: 558 ESTVLVSGGSDCTVRAW 574
Score = 262 (97.3 bits), Expect = 1.0e-19, Sum P(2) = 1.0e-19
Identities = 66/204 (32%), Positives = 100/204 (49%)
Query: 28 SSDGSFIACACGES-INI--VDLSNASI-KST-IEGGSDTITALA---------LSPDDK 73
S D + IAC ES I + + S+ KST +E ++ L+ SPD+K
Sbjct: 333 SPDSTMIACGFQESYIRLWSIKADKKSLPKSTSVEDSDGSVRLLSHSGPVYGTTFSPDNK 392
Query: 74 LLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDG 133
L S R+W + T L ++KGH GP +A P G ATA D+ +W D
Sbjct: 393 YLLSCSEDASARLWSVDTKTALVAYKGHTGPVWDVAFGPFGHYFATASHDQTAQLWSCDH 452
Query: 134 GFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTS 193
+ F GH V + FHP++ + + +GS D T R+WD+ V + H VT+
Sbjct: 453 IYPLRVFAGHLSDVDCVTFHPNS--AYVLTGSSDKTCRLWDVHRGHSVRVFNGHTQPVTA 510
Query: 194 MAITSDGSTLISAGRDKVVNLWDL 217
+AI DG T+ SA + +++LWD+
Sbjct: 511 VAIAPDGHTMASADSEGLIHLWDI 534
Score = 245 (91.3 bits), Expect = 2.7e-17, P = 2.7e-17
Identities = 58/194 (29%), Positives = 94/194 (48%)
Query: 414 IVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDG 473
+++ S+D S RLW +++ + GH G V VAF ++ + S D T ++WS D
Sbjct: 394 LLSCSEDASARLWSVDTKTALVAYKGHTGPVWDVAFGP-FGHYFATASHDQTAQLWSCDH 452
Query: 474 LSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFR 533
+ P+ V A H D++ + PN + V TGS D+T +W + SV F
Sbjct: 453 I-----YPLR-----VFAGHLSDVDCVTFHPNSAYVLTGSSDKTCRLWDVHRGHSVRVFN 502
Query: 534 GHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQI 593
GH + + +V +P + +A + I +W I G +KT GH ++ SF +
Sbjct: 503 GHTQPVTAVAIAPDGHTMASADSEGLIHLWDIGTGRRIKTMRGHRGNIYSLSFSRESTVL 562
Query: 594 VSCGADGLVKLWTV 607
VS G+D V+ W V
Sbjct: 563 VSGGSDCTVRAWDV 576
Score = 224 (83.9 bits), Expect = 5.3e-15, P = 5.3e-15
Identities = 49/200 (24%), Positives = 94/200 (47%)
Query: 457 LVSGSSDHTIKVWSFDGLSDDAEQPMNLKAK----AV-VAAHGKDINSLAVAPNDSLVCT 511
+ G + I++WS +D P + + +V + +H + +P++ + +
Sbjct: 339 IACGFQESYIRLWSIK--ADKKSLPKSTSVEDSDGSVRLLSHSGPVYGTTFSPDNKYLLS 396
Query: 512 GSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCL 571
S+D +A +W + ++V ++GH +W V F P TAS D+T ++WS L
Sbjct: 397 CSEDASARLWSVDTKTALVAYKGHTGPVWDVAFGPFGHYFATASHDQTAQLWSCDHIYPL 456
Query: 572 KTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKK 631
+ F GH S V +F A +++ +D +LW V G + ++ H + A+A+
Sbjct: 457 RVFAGHLSDVDCVTFHPNSAYVLTGSSDKTCRLWDVHRGHSVRVFNGHTQPVTAVAIAPD 516
Query: 632 TEMFATGGSDALVNLWHDST 651
A+ S+ L++LW T
Sbjct: 517 GHTMASADSEGLIHLWDIGT 536
Score = 189 (71.6 bits), Expect = 3.5e-11, P = 3.5e-11
Identities = 47/229 (20%), Positives = 94/229 (41%)
Query: 28 SSDGSFI-ACACGESINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRV 86
S D ++ +C+ S + + + +G + + +A P ++ H + ++
Sbjct: 388 SPDNKYLLSCSEDASARLWSVDTKTALVAYKGHTGPVWDVAFGPFGHYFATASHDQTAQL 447
Query: 87 WDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGV 146
W + LR + GH + HP+ + T +D+ +WDV G F GH
Sbjct: 448 WSCDHIYPLRVFAGHLSDVDCVTFHPNSAYVLTGSSDKTCRLWDVHRGHSVRVFNGHTQP 507
Query: 147 VSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISA 206
V+++ PD + S + + +WD+ + + T+ H + S++ + + + L+S
Sbjct: 508 VTAVAIAPDGHT--MASADSEGLIHLWDIGTGRRIKTMRGHRGNIYSLSFSRESTVLVSG 565
Query: 207 GRDKVVNLWDLRDYSCKLTVPTYEMVEAVCAIPPGSAFDSFLSSYNQQT 255
G D V WD+ + P + + P SA S + N T
Sbjct: 566 GSDCTVRAWDV--FKTNYNNPVSSSLTG-SVVTPFSAKTSTFNEVNWST 611
Score = 145 (56.1 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 65/253 (25%), Positives = 104/253 (41%)
Query: 272 ERGIVRMWN--ADSACLYEQKS-SDVTISFEMDDSKRGFTAATVLPSNQGLLCVTADQQL 328
+ +R+W+ AD L + S D S + T P N+ LL + D
Sbjct: 344 QESYIRLWSIKADKKSLPKSTSVEDSDGSVRLLSHSGPVYGTTFSPDNKYLLSCSEDASA 403
Query: 329 LLYTTVEVPEKKMELILSKRLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSC 388
L++ + K L+ K G+ + D+ F G Y A A++ + Q++ +
Sbjct: 404 RLWSV----DTKTALVAYK---GHTGPVWDVAF-GPFGHYFATASHDQTAQLWSCDHIYP 455
Query: 389 SYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVA 448
V AGH V C+ T +S +L TGS D + RLWD V V GH V AVA
Sbjct: 456 LRVFAGHLSDVDCV-TFHPNSAYVL--TGSSDKTCRLWDVHRGHSVRVFNGHTQPVTAVA 512
Query: 449 FSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSL 508
+ + + S S+ I +W D +K + H +I SL+ + ++
Sbjct: 513 IAPD-GHTMASADSEGLIHLW-------DIGTGRRIKT---MRGHRGNIYSLSFSRESTV 561
Query: 509 VCTGSQDRTACVW 521
+ +G D T W
Sbjct: 562 LVSGGSDCTVRAW 574
Score = 128 (50.1 bits), Expect = 4.4e-05, Sum P(2) = 4.4e-05
Identities = 37/147 (25%), Positives = 56/147 (38%)
Query: 101 HDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSL 160
H GP G P L + D +W VD +KGH G V + F P
Sbjct: 378 HSGPVYGTTFSPDNKYLLSCSEDASARLWSVDTKTALVAYKGHTGPVWDVAFGPFGH--Y 435
Query: 161 LFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDL-RD 219
+ S D T ++W + H S V + + + +++ DK LWD+ R
Sbjct: 436 FATASHDQTAQLWSCDHIYPLRVFAGHLSDVDCVTFHPNSAYVLTGSSDKTCRLWDVHRG 495
Query: 220 YSCKLTVPTYEMVEAVCAIPPGSAFDS 246
+S ++ + V AV P G S
Sbjct: 496 HSVRVFNGHTQPVTAVAIAPDGHTMAS 522
Score = 127 (49.8 bits), Expect = 0.00019, P = 0.00019
Identities = 37/138 (26%), Positives = 56/138 (40%)
Query: 523 LPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSI-SDGSCL------KTFE 575
LP V + TF + EFSP ++ + I++WSI +D L + +
Sbjct: 312 LPS-VCMYTFHHTNNNMNCAEFSPDSTMIACGFQESYIRLWSIKADKKSLPKSTSVEDSD 370
Query: 576 G------HTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVG 629
G H+ V +F ++SC D +LW+V T + Y H +W +A G
Sbjct: 371 GSVRLLSHSGPVYGTTFSPDNKYLLSCSEDASARLWSVDTKTALVAYKGHTGPVWDVAFG 430
Query: 630 KKTEMFATGGSDALVNLW 647
FAT D LW
Sbjct: 431 PFGHYFATASHDQTAQLW 448
Score = 125 (49.1 bits), Expect = 0.00031, P = 0.00031
Identities = 35/165 (21%), Positives = 67/165 (40%)
Query: 496 DINSLAVAPNDSLVCTGSQDRTACVWR-------LPDLVSV------VTFRGHKRGIWSV 542
++N +P+ +++ G Q+ +W LP SV V H ++
Sbjct: 326 NMNCAEFSPDSTMIACGFQESYIRLWSIKADKKSLPKSTSVEDSDGSVRLLSHSGPVYGT 385
Query: 543 EFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLV 602
FSP ++ +++ S D + ++WS+ + L ++GHT V +F G + D
Sbjct: 386 TFSPDNKYLLSCSEDASARLWSVDTKTALVAYKGHTGPVWDVAFGPFGHYFATASHDQTA 445
Query: 603 KLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLW 647
+LW+ + + H + + + TG SD LW
Sbjct: 446 QLWSCDHIYPLRVFAGHLSDVDCVTFHPNSAYVLTGSSDKTCRLW 490
Score = 52 (23.4 bits), Expect = 1.0e-19, Sum P(2) = 1.0e-19
Identities = 21/89 (23%), Positives = 39/89 (43%)
Query: 369 LAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDS 428
+A A + + ++D+ + + GH + L + S ++V+G D +VR WD
Sbjct: 520 MASADSEGLIHLWDIGTGRRIKTMRGHRGNIYSL---SFSRESTVLVSGGSDCTVRAWDV 576
Query: 429 -ESRCCVGVGTGHMGAVGAVAFSKKLQNF 456
++ V + G+V FS K F
Sbjct: 577 FKTNYNNPVSSSLTGSV-VTPFSAKTSTF 604
>TAIR|locus:2150788 [details] [associations]
symbol:AT5G08390 "AT5G08390" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] [GO:0007155 "cell adhesion" evidence=RCA] [GO:0010090
"trichome morphogenesis" evidence=RCA] [GO:0010228 "vegetative to
reproductive phase transition of meristem" evidence=RCA]
[GO:0016926 "protein desumoylation" evidence=RCA] [GO:0042546 "cell
wall biogenesis" evidence=RCA] [GO:0044036 "cell wall macromolecule
metabolic process" evidence=RCA] [GO:0045010 "actin nucleation"
evidence=RCA] [GO:0050665 "hydrogen peroxide biosynthetic process"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002688 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013 GO:GO:0080008
GO:GO:0008352 PANTHER:PTHR19845 OMA:YWERNDI IPI:IPI00533677
RefSeq:NP_568194.2 UniGene:At.10141 UniGene:At.72630
ProteinModelPortal:F4KB17 SMR:F4KB17 PRIDE:F4KB17
EnsemblPlants:AT5G08390.1 GeneID:830737 KEGG:ath:AT5G08390
Uniprot:F4KB17
Length = 839
Score = 269 (99.8 bits), Expect = 1.1e-19, P = 1.1e-19
Identities = 63/210 (30%), Positives = 95/210 (45%)
Query: 440 HMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVA--AHGKDI 497
H AV + +K LV+G DH + +W+ K A+++ H I
Sbjct: 15 HSAAVNCLKIGRKSSRVLVTGGEDHKVNLWAIG------------KPNAILSLYGHSSGI 62
Query: 498 NSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGD 557
+S+ ++ LV G+ T +W L + V T GH+ SV F P + + S D
Sbjct: 63 DSVTFDASEGLVAAGAASGTIKLWDLEEAKVVRTLTGHRSNCVSVNFHPFGEFFASGSLD 122
Query: 558 KTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYD 617
+KIW I C+ T++GHT V F G IVS G D +VK+W + G+ + +
Sbjct: 123 TNLKIWDIRKKGCIHTYKGHTRGVNVLRFTPDGRWIVSGGEDNVVKVWDLTAGKLLHEFK 182
Query: 618 KHEDKIWALAVGKKTEMFATGGSDALVNLW 647
HE KI +L + ATG +D V W
Sbjct: 183 SHEGKIQSLDFHPHEFLLATGSADKTVKFW 212
Score = 232 (86.7 bits), Expect = 1.6e-14, Sum P(2) = 1.6e-14
Identities = 55/216 (25%), Positives = 94/216 (43%)
Query: 7 KKSYGCEPVLQQFYGGGPLVVSSDGSFIACACGES--INIVDLSNASIKSTIEGGSDTIT 64
K++Y + + L + S + GE +N+ + + ++ G S I
Sbjct: 4 KRAYKLQEFVAHSAAVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLYGHSSGID 63
Query: 65 ALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADR 124
++ + L+ + S I++WDL K +R+ GH + + HP G A+ D
Sbjct: 64 SVTFDASEGLVAAGAASGTIKLWDLEEAKVVRTLTGHRSNCVSVNFHPFGEFFASGSLDT 123
Query: 125 KVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATL 184
+ +WD+ C H +KGH V+ + F PD + SG +D V+VWDL A K +
Sbjct: 124 NLKIWDIRKKGCIHTYKGHTRGVNVLRFTPDG--RWIVSGGEDNVVKVWDLTAGKLLHEF 181
Query: 185 DKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDY 220
H ++ S+ L + DK V WDL +
Sbjct: 182 KSHEGKIQSLDFHPHEFLLATGSADKTVKFWDLETF 217
Score = 227 (85.0 bits), Expect = 5.5e-14, Sum P(2) = 5.5e-14
Identities = 51/195 (26%), Positives = 89/195 (45%)
Query: 28 SSDGSFIACACGESINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRVW 87
+S+G A A +I + DL A + T+ G ++ P + S +++W
Sbjct: 69 ASEGLVAAGAASGTIKLWDLEEAKVVRTLTGHRSNCVSVNFHPFGEFFASGSLDTNLKIW 128
Query: 88 DLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVV 147
D+ C+ ++KGH + P G + + G D V VWD+ G H FK H+G +
Sbjct: 129 DIRKKGCIHTYKGHTRGVNVLRFTPDGRWIVSGGEDNVVKVWDLTAGKLLHEFKSHEGKI 188
Query: 148 SSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAG 207
S+ FHP + LL +GS D TV+ WDL + + + + V + DG +++ G
Sbjct: 189 QSLDFHPH--EFLLATGSADKTVKFWDLETFELIGSGGTETTGVRCLTFNPDGKSVL-CG 245
Query: 208 RDKVVNLWDLRDYSC 222
+ + ++ C
Sbjct: 246 LQESLKIFSWEPIRC 260
Score = 217 (81.4 bits), Expect = 4.8e-14, P = 4.8e-14
Identities = 57/221 (25%), Positives = 97/221 (43%)
Query: 395 HSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQ 454
HS V CL SS ++L VTG +D+ V LW + GH + +V F +
Sbjct: 15 HSAAVNCLKIGRKSS-RVL-VTGGEDHKVNLWAIGKPNAILSLYGHSSGIDSVTFDAS-E 71
Query: 455 NFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQ 514
+ +G++ TIK+W D E+ K + H + S+ P +GS
Sbjct: 72 GLVAAGAASGTIKLW-------DLEEA---KVVRTLTGHRSNCVSVNFHPFGEFFASGSL 121
Query: 515 DRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTF 574
D +W + + T++GH RG+ + F+P + +++ D +K+W ++ G L F
Sbjct: 122 DTNLKIWDIRKKGCIHTYKGHTRGVNVLRFTPDGRWIVSGGEDNVVKVWDLTAGKLLHEF 181
Query: 575 EGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIAT 615
+ H + F + + AD VK W + T E I +
Sbjct: 182 KSHEGKIQSLDFHPHEFLLATGSADKTVKFWDLETFELIGS 222
Score = 198 (74.8 bits), Expect = 5.6e-12, P = 5.6e-12
Identities = 60/269 (22%), Positives = 113/269 (42%)
Query: 347 KRLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCA 406
+ V ++ + LK + + L +V ++ + + L GHS + D+
Sbjct: 10 QEFVAHSAAVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLYGHSSGI---DSVT 66
Query: 407 LSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTI 466
+ + L+ G+ +++LWD E V TGH +V F F SGS D +
Sbjct: 67 FDASEGLVAAGAASGTIKLWDLEEAKVVRTLTGHRSNCVSVNFHP-FGEFFASGSLDTNL 125
Query: 467 KVWSFDGLSDDAEQPMNLKAKAVV---AAHGKDINSLAVAPNDSLVCTGSQDRTACVWRL 523
K+W +++ K + H + +N L P+ + +G +D VW L
Sbjct: 126 KIW-------------DIRKKGCIHTYKGHTRGVNVLRFTPDGRWIVSGGEDNVVKVWDL 172
Query: 524 PDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLR 583
+ F+ H+ I S++F P + ++ T S DKT+K W + + + T+ V
Sbjct: 173 TAGKLLHEFKSHEGKIQSLDFHPHEFLLATGSADKTVKFWDLETFELIGSGGTETTGVRC 232
Query: 584 ASFLTRGAQIVSCGADGLVKLWTVRTGEC 612
+F G ++ CG +K+++ C
Sbjct: 233 LTFNPDGKSVL-CGLQESLKIFSWEPIRC 260
Score = 143 (55.4 bits), Expect = 4.5e-05, Sum P(3) = 4.5e-05
Identities = 35/118 (29%), Positives = 53/118 (44%)
Query: 113 SGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRV 172
S +L T G D KV +W + GH + S+ F D + L+ +G+ T+++
Sbjct: 28 SSRVLVTGGEDHKVNLWAIGKPNAILSLYGHSSGIDSVTF--DASEGLVAAGAASGTIKL 85
Query: 173 WDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYE 230
WDL K V TL H S S+ G S D + +WD+R C + TY+
Sbjct: 86 WDLEEAKVVRTLTGHRSNCVSVNFHPFGEFFASGSLDTNLKIWDIRKKGC---IHTYK 140
Score = 44 (20.5 bits), Expect = 4.5e-05, Sum P(3) = 4.5e-05
Identities = 13/45 (28%), Positives = 23/45 (51%)
Query: 268 ITVGERGIVRMWNADSA-CLYEQKSSDVTISFEMDDSKRGFTAAT 311
++ GE +V++W+ + L+E KS + I +D F AT
Sbjct: 159 VSGGEDNVVKVWDLTAGKLLHEFKSHEGKIQ-SLDFHPHEFLLAT 202
Score = 38 (18.4 bits), Expect = 1.6e-14, Sum P(2) = 1.6e-14
Identities = 26/103 (25%), Positives = 40/103 (38%)
Query: 416 TGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLS 475
+GS + L D+ S+ +G G + +K L VS +SD K G S
Sbjct: 319 SGSGRDQAGLNDNSSKVILGKLPGSQKVDPLLKETKSLGKLSVSQNSDPLPKDTKSTGRS 378
Query: 476 D--DAEQPMNLKAKAV---VAAHGKDINSLAVAPNDSLVCTGS 513
+ P+ + K + A H D V + +L TGS
Sbjct: 379 SVSQSSDPLVKEPKPLGRFSATHSSD----TVKESRTLSSTGS 417
>DICTYBASE|DDB_G0284621 [details] [associations]
symbol:pwp2 "periodic tryptophan protein"
species:44689 "Dictyostelium discoideum" [GO:0030515 "snoRNA
binding" evidence=ISS] [GO:0006364 "rRNA processing" evidence=ISS]
[GO:0005829 "cytosol" evidence=ISS] [GO:0005730 "nucleolus"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
dictyBase:DDB_G0284621 GO:GO:0005829 GO:GO:0005730
GenomeReviews:CM000153_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030515 eggNOG:COG2319
InterPro:IPR011047 SUPFAM:SSF50998 GO:GO:0006364 HSSP:P16649
EMBL:AAFI02000070 KO:K14558 InterPro:IPR027145 InterPro:IPR007148
PANTHER:PTHR19858 Pfam:PF04003 RefSeq:XP_638435.1
ProteinModelPortal:Q54PE0 STRING:Q54PE0 EnsemblProtists:DDB0235358
GeneID:8624685 KEGG:ddi:DDB_G0284621 OMA:HEAPIAC
ProtClustDB:CLSZ2430232 Uniprot:Q54PE0
Length = 922
Score = 225 (84.3 bits), Expect = 1.1e-19, Sum P(2) = 1.1e-19
Identities = 81/282 (28%), Positives = 133/282 (47%)
Query: 367 QYLAVA-TNIEQVQVYDLSSMSCSYVLA--GHSEIVLCLDTCALSSGKILIVTGSKDNSV 423
++LA + + Q+ V++ S + Y+L GHS ++T A S I TG +D V
Sbjct: 328 EWLAFGCSELGQLLVWEWRSET--YILKQQGHS---YNMNTVAYSPDGQTIATGGEDGKV 382
Query: 424 RLWDSESRCCVGVGTGHMGAVGAVAFSK-KLQNFLVSGSSDHTIKVWSFDGLSDDAEQPM 482
++W++ S C T H G V AV +S QN + S D TI+ + D +
Sbjct: 383 KIWNTTSGYCYITFTEHEGPVTAVKYSPVSSQNVVFSAGVDGTIRAF-------DLVRYR 435
Query: 483 NLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTAC-VW--RLPDLVSVVTFRGHKRGI 539
N + V+ + + LAV P+ ++ GS D VW R L +++ GH+ +
Sbjct: 436 NFRT--FVSPNKTQFSCLAVDPSGEIIAAGSLDSFEIYVWSVRTGRLTDILS--GHQSPV 491
Query: 540 WSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQ-IVSCGA 598
+ F P++ + +AS DK+ KIW+I + ++ HTS VL ++ G + IVSC
Sbjct: 492 CELAFDPINPFLASASWDKSCKIWNIFEDREIRESIQHTSDVLTCAYSQDGKKFIVSC-L 550
Query: 599 DGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGS 640
DG ++++ T I D D + G K E+ A S
Sbjct: 551 DGTIQIYETSTWGQIGLIDGKNDIMGGR--GYKDEILAKNNS 590
Score = 169 (64.5 bits), Expect = 5.5e-13, Sum P(2) = 5.5e-13
Identities = 36/147 (24%), Positives = 73/147 (49%)
Query: 74 LLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDG 133
L F ++ VW+ + + +GH +A P G +AT G D KV +W+
Sbjct: 330 LAFGCSELGQLLVWEWRSETYILKQQGHSYNMNTVAYSPDGQTIATGGEDGKVKIWNTTS 389
Query: 134 GFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVAT-LDKHFSRVT 192
G+C F H+G V+++ + P + ++++FS D T+R +DL+ + T + + ++ +
Sbjct: 390 GYCYITFTEHEGPVTAVKYSPVSSQNVVFSAGVDGTIRAFDLVRYRNFRTFVSPNKTQFS 449
Query: 193 SMAITSDGSTLISAGRDKV-VNLWDLR 218
+A+ G + + D + +W +R
Sbjct: 450 CLAVDPSGEIIAAGSLDSFEIYVWSVR 476
Score = 160 (61.4 bits), Expect = 8.2e-08, P = 8.2e-08
Identities = 51/203 (25%), Positives = 88/203 (43%)
Query: 20 YGGGPLVVSSDGSFIACACGES--INIVDLSNASIKSTIEGGSDTITALALSP--DDKLL 75
Y + S DG IA GE + I + ++ T +TA+ SP ++
Sbjct: 359 YNMNTVAYSPDGQTIATG-GEDGKVKIWNTTSGYCYITFTEHEGPVTAVKYSPVSSQNVV 417
Query: 76 FSSGHSREIRVWDLSTLKCLRSWKGHDGPAIG-MACHPSGGLLATAGADR-KVLVWDVDG 133
FS+G IR +DL + R++ + +A PSG ++A D ++ VW V
Sbjct: 418 FSAGVDGTIRAFDLVRYRNFRTFVSPNKTQFSCLAVDPSGEIIAAGSLDSFEIYVWSVRT 477
Query: 134 GFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTS 193
G T GH+ V + F P L S S D + ++W++ + + +H S V +
Sbjct: 478 GRLTDILSGHQSPVCELAFDPINP--FLASASWDKSCKIWNIFEDREIRESIQHTSDVLT 535
Query: 194 MAITSDGSTLISAGRDKVVNLWD 216
A + DG I + D + +++
Sbjct: 536 CAYSQDGKKFIVSCLDGTIQIYE 558
Score = 143 (55.4 bits), Expect = 5.6e-06, P = 5.6e-06
Identities = 44/205 (21%), Positives = 92/205 (44%)
Query: 20 YGGGPLVVSSDGSFIACACGE--SINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFS 77
+G +++ G ++A C E + + + + + +G S + +A SPD + + +
Sbjct: 316 HGISTSAINNTGEWLAFGCSELGQLLVWEWRSETYILKQQGHSYNMNTVAYSPDGQTIAT 375
Query: 78 SGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHP--SGGLLATAGADRKVLVWDVDG-- 133
G ++++W+ ++ C ++ H+GP + P S ++ +AG D + +D+
Sbjct: 376 GGEDGKVKIWNTTSGYCYITFTEHEGPVTAVKYSPVSSQNVVFSAGVDGTIRAFDLVRYR 435
Query: 134 GFCTHYFKGHKGVVSSILFHPDTDKSLLFSGS-DDATVRVWDLLAKKCVATLDKHFSRVT 192
F T + +K S + P + ++ +GS D + VW + + L H S V
Sbjct: 436 NFRT-FVSPNKTQFSCLAVDPSGE--IIAAGSLDSFEIYVWSVRTGRLTDILSGHQSPVC 492
Query: 193 SMAITSDGSTLISAGRDKVVNLWDL 217
+A L SA DK +W++
Sbjct: 493 ELAFDPINPFLASASWDKSCKIWNI 517
Score = 110 (43.8 bits), Expect = 2.8e-07, Sum P(2) = 2.8e-07
Identities = 59/295 (20%), Positives = 110/295 (37%)
Query: 365 EEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSS-GKILIVTGSKDNSV 423
+ + L V + Q +Y++ + Y L S + T A+++ G+ L S+ +
Sbjct: 284 KSKLLLVGFSTGQFILYEMPGFNQLYKLNISSHGI---STSAINNTGEWLAFGCSELGQL 340
Query: 424 RLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMN 483
+W+ S + GH + VA+S Q + +G D +K+W+ +
Sbjct: 341 LVWEWRSETYILKQQGHSYNMNTVAYSPDGQT-IATGGEDGKVKIWN----------TTS 389
Query: 484 LKAKAVVAAHGKDINSLAVAP--NDSLVCTGSQDRTACVWRLPDLVSVVTFRG----HKR 537
H + ++ +P + ++V + D T R DLV FR +K
Sbjct: 390 GYCYITFTEHEGPVTAVKYSPVSSQNVVFSAGVDGTI---RAFDLVRYRNFRTFVSPNKT 446
Query: 538 GIWSVEFSPVDQVVITASGDK-TIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSC 596
+ P +++ S D I +WS+ G GH S V +F + S
Sbjct: 447 QFSCLAVDPSGEIIAAGSLDSFEIYVWSVRTGRLTDILSGHQSPVCELAFDPINPFLASA 506
Query: 597 GADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLWHDST 651
D K+W + I +H + A + + F D + ++ ST
Sbjct: 507 SWDKSCKIWNIFEDREIRESIQHTSDVLTCAYSQDGKKFIVSCLDGTIQIYETST 561
Score = 98 (39.6 bits), Expect = 1.4e-10, Sum P(3) = 1.4e-10
Identities = 30/121 (24%), Positives = 57/121 (47%)
Query: 125 KVLVWDVDGGFCTHYFK--GHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVA 182
++LVW+ T+ K GH ++++ + PD + +G +D V++W+ + C
Sbjct: 339 QLLVWEWRSE--TYILKQQGHSYNMNTVAYSPDGQT--IATGGEDGKVKIWNTTSGYCYI 394
Query: 183 TLDKHFSRVTSMAIT--SDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYEMVEAVC-AIP 239
T +H VT++ + S + + SAG D + +DL Y T + + C A+
Sbjct: 395 TFTEHEGPVTAVKYSPVSSQNVVFSAGVDGTIRAFDLVRYRNFRTFVSPNKTQFSCLAVD 454
Query: 240 P 240
P
Sbjct: 455 P 455
Score = 96 (38.9 bits), Expect = 1.1e-19, Sum P(2) = 1.1e-19
Identities = 32/123 (26%), Positives = 57/123 (46%)
Query: 6 LKKSYGCEPVLQQFYGGGPLVVSSDGSFIACACGESINIVDLSN-ASIKSTIEGGSDTIT 64
+K Y +L Y G ++ + DG+ + G + + DL N SI I+ + I
Sbjct: 1 MKFGYKFSNLLGTVYNKGNILFTPDGNTVISPVGNRLTVFDLVNHTSITLPIQSKYN-IR 59
Query: 65 ALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADR 124
LALSP+ ++L +S S + +L+ L +K P + P+G ++A A ++
Sbjct: 60 RLALSPNGQILITSDESGHTLIINLTRQVVLGEYKFFKTPK-SILFSPNGAIIAIAVLEK 118
Query: 125 KVL 127
L
Sbjct: 119 VFL 121
Score = 92 (37.4 bits), Expect = 2.2e-05, Sum P(2) = 2.2e-05
Identities = 65/296 (21%), Positives = 113/296 (38%)
Query: 250 SYNQQTIKKKRRSLEIHFITVGERGIVRMWNADSACLYEQKSSDVTISFEMDDSKRGFTA 309
SYN T+ I T GE G V++WN S Y I+F + TA
Sbjct: 358 SYNMNTVAYSPDGQTI--ATGGEDGKVKIWNTTSGYCY--------ITFTEHEGP--VTA 405
Query: 310 ATVLP-SNQGLL-CVTADQQLLLYTTVEVPEKKMELILSKRLVGYNEEILDLKFLGEEEQ 367
P S+Q ++ D + + V + +S ++ +D GE
Sbjct: 406 VKYSPVSSQNVVFSAGVDGTIRAFDLVRY--RNFRTFVSPNKTQFSCLAVDPS--GE--- 458
Query: 368 YLAVATNIEQVQVYDLSSMS--CSYVLAGHSEIVLCLDTCALSSGKI--LIVTGSKDNSV 423
+ A +++ ++Y S + + +L+GH V C L+ I + + S D S
Sbjct: 459 -IIAAGSLDSFEIYVWSVRTGRLTDILSGHQSPV-----CELAFDPINPFLASASWDKSC 512
Query: 424 RLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKV-----WSFDGLSDDA 478
++W+ + H V A+S+ + F+VS D TI++ W GL D
Sbjct: 513 KIWNIFEDREIRESIQHTSDVLTCAYSQDGKKFIVS-CLDGTIQIYETSTWGQIGLIDGK 571
Query: 479 EQPMNLKA-KAVVAAH----GKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSV 529
M + K + A G+ +A PN + G + C++ + V +
Sbjct: 572 NDIMGGRGYKDEILAKNNSAGRAFTKIAFTPNGECIIAGGNSKYICIYHIDQQVLI 627
Score = 90 (36.7 bits), Expect = 5.5e-13, Sum P(2) = 5.5e-13
Identities = 43/194 (22%), Positives = 78/194 (40%)
Query: 409 SGKILIVTGSKDN-SVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIK 467
SG+I I GS D+ + +W + + +GH V +AF + FL S S D + K
Sbjct: 456 SGEI-IAAGSLDSFEIYVWSVRTGRLTDILSGHQSPVCELAFDP-INPFLASASWDKSCK 513
Query: 468 VWSFDGLSDDAE--QPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPD 525
+W+ + +D E + + + + A+ +D V+ D + + +
Sbjct: 514 IWN---IFEDREIRESIQHTSDVLTCAYSQDGKKFIVSCLDGTIQIYETSTWGQIGLIDG 570
Query: 526 LVSVVTFRGHK-----------RGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTF 574
++ RG+K R + F+P + +I K I I+ I +K +
Sbjct: 571 KNDIMGGRGYKDEILAKNNSAGRAFTKIAFTPNGECIIAGGNSKYICIYHIDQQVLIKKY 630
Query: 575 EGHTSSVLRASFLT 588
TSS L +T
Sbjct: 631 S--TSSNLSLDGIT 642
Score = 87 (35.7 bits), Expect = 1.8e-09, Sum P(3) = 1.8e-09
Identities = 32/136 (23%), Positives = 60/136 (44%)
Query: 111 HPSGGLLATAGADRKVLVWDVDGGFCTHY---FKGHKGVVSSILFHPDTDKSLLFSGSDD 167
H LL + + +++++ G F Y H G+ +S + +T + L F S+
Sbjct: 282 HLKSKLLLVGFSTGQFILYEMPG-FNQLYKLNISSH-GISTSAI--NNTGEWLAFGCSEL 337
Query: 168 ATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVP 227
+ VW+ ++ + H + ++A + DG T+ + G D V +W+ C +T
Sbjct: 338 GQLLVWEWRSETYILKQQGHSYNMNTVAYSPDGQTIATGGEDGKVKIWNTTSGYCYITFT 397
Query: 228 TYE-MVEAVCAIPPGS 242
+E V AV P S
Sbjct: 398 EHEGPVTAVKYSPVSS 413
Score = 37 (18.1 bits), Expect = 0.00011, Sum P(3) = 0.00011
Identities = 10/55 (18%), Positives = 23/55 (41%)
Query: 60 SDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPSG 114
+D++ + + LL G S + + + + + G++ I A P+G
Sbjct: 153 ADSLKLMIGCKNGTLLIRQGKSERVSYFQVKGSGIINCFFGNEESTIAYAVTPTG 207
>ZFIN|ZDB-GENE-040116-3 [details] [associations]
symbol:pafah1b1b "platelet-activating factor
acetylhydrolase, isoform Ib, alpha subunit b" species:7955 "Danio
rerio" [GO:0040023 "establishment of nucleus localization"
evidence=IMP] [GO:0045494 "photoreceptor cell maintenance"
evidence=IMP] [GO:0045176 "apical protein localization"
evidence=IMP] [GO:0048854 "brain morphogenesis" evidence=IGI;IMP]
[GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0006810 "transport"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0005815 "microtubule organizing center" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 ZFIN:ZDB-GENE-040116-3
GO:GO:0005737 GO:GO:0030154 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006810 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005815 GO:GO:0045494 InterPro:IPR013720
Pfam:PF08513 GO:GO:0005874 GO:GO:0040023 GO:GO:0048854
GO:GO:0045176 GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
EMBL:DQ141216 EMBL:BC044530 IPI:IPI00500561 RefSeq:NP_958503.1
UniGene:Dr.79815 ProteinModelPortal:Q803D2 SMR:Q803D2 STRING:Q803D2
PRIDE:Q803D2 Ensembl:ENSDART00000031470 GeneID:394247
KEGG:dre:394247 CTD:394247 InParanoid:Q07DR2 NextBio:20815156
Bgee:Q803D2 Uniprot:Q803D2
Length = 410
Score = 242 (90.2 bits), Expect = 4.3e-17, Sum P(2) = 4.3e-17
Identities = 64/208 (30%), Positives = 93/208 (44%)
Query: 438 TGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDI 497
+GH V V F + +VS S D TIKVW ++ + D E+ LK H +
Sbjct: 105 SGHRSPVTRVIFHPVF-SLMVSASEDATIKVWDYE--AGDFER--TLKG------HTDSV 153
Query: 498 NSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGD 557
++ L+ + S D T +W + T GH + SV P +++AS D
Sbjct: 154 QDISFDQTGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRD 213
Query: 558 KTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYD 617
KT+K+W ++ G C+KTF GH V G + SC D V++W V T EC A
Sbjct: 214 KTMKMWEVATGYCVKTFTGHREWVRMVRPNQDGTLLASCSNDQTVRVWVVATKECKAELR 273
Query: 618 KHEDKI----WALAVGKKTEMFATGGSD 641
+HE + WA T ATG +
Sbjct: 274 EHEHVVECISWAPESAHPTISEATGSEN 301
Score = 240 (89.5 bits), Expect = 2.5e-17, P = 2.5e-17
Identities = 63/236 (26%), Positives = 101/236 (42%)
Query: 53 KSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHP 112
K + G +T + P L+ S+ I+VWD R+ KGH ++
Sbjct: 101 KYALSGHRSPVTRVIFHPVFSLMVSASEDATIKVWDYEAGDFERTLKGHTDSVQDISFDQ 160
Query: 113 SGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRV 172
+G LLA+ AD + +WD G C GH VSS+ P+ D + S S D T+++
Sbjct: 161 TGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDH--IVSASRDKTMKM 218
Query: 173 WDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYEMV 232
W++ CV T H V + DG+ L S D+ V +W + CK + +E V
Sbjct: 219 WEVATGYCVKTFTGHREWVRMVRPNQDGTLLASCSNDQTVRVWVVATKECKAELREHEHV 278
Query: 233 EAVCAIPPGSAFDSFLSSYNQQTIKKKRRSLEIHFITVGERG-IVRMWNADSA-CL 286
+ P SA + + + K + F+ G R ++MW+ + CL
Sbjct: 279 VECISWAPESAHPTISEATGSENKKSGKPG---PFLLSGSRDKTIKMWDISTGMCL 331
Score = 235 (87.8 bits), Expect = 1.1e-19, Sum P(2) = 1.1e-19
Identities = 47/147 (31%), Positives = 79/147 (53%)
Query: 41 SINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKG 100
+I + D + T++G +D++ ++ KLL S I++WD +C+R+ G
Sbjct: 131 TIKVWDYEAGDFERTLKGHTDSVQDISFDQTGKLLASCSADMTIKLWDFQGFECIRTMHG 190
Query: 101 HDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSL 160
HD +A P+G + +A D+ + +W+V G+C F GH+ V + P+ D +L
Sbjct: 191 HDHNVSSVAIMPNGDHIVSASRDKTMKMWEVATGYCVKTFTGHREWVRMV--RPNQDGTL 248
Query: 161 LFSGSDDATVRVWDLLAKKCVATLDKH 187
L S S+D TVRVW + K+C A L +H
Sbjct: 249 LASCSNDQTVRVWVVATKECKAELREH 275
Score = 230 (86.0 bits), Expect = 3.5e-16, P = 3.5e-16
Identities = 69/274 (25%), Positives = 123/274 (44%)
Query: 347 KRLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCA 406
+ L G+ + + D+ F + + LA + ++++D C + GH V + A
Sbjct: 144 RTLKGHTDSVQDISF-DQTGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNV---SSVA 199
Query: 407 LSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTI 466
+ IV+ S+D ++++W+ + CV TGH V V ++ L S S+D T+
Sbjct: 200 IMPNGDHIVSASRDKTMKMWEVATGYCVKTFTGHREWVRMVRPNQD-GTLLASCSNDQTV 258
Query: 467 KVWSFDGLSDDAE-----QPMNLKAKAVVAAH-------GKDINSLAVAPNDSLVCTGSQ 514
+VW AE + + A +AH G + N + P L+ +GS+
Sbjct: 259 RVWVVATKECKAELREHEHVVECISWAPESAHPTISEATGSE-NKKSGKPGPFLL-SGSR 316
Query: 515 DRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTF 574
D+T +W + + ++T GH + V F P + V++ + DKT++IW + C+KT
Sbjct: 317 DKTIKMWDISTGMCLMTLVGHDNWVRGVLFHPGGRFVVSCADDKTLRIWDYKNKRCMKTL 376
Query: 575 EGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVR 608
H V F +V+ D VK+W R
Sbjct: 377 SAHEHFVTSLDFHKASPYVVTGSVDQTVKVWECR 410
Score = 221 (82.9 bits), Expect = 3.6e-15, P = 3.6e-15
Identities = 72/282 (25%), Positives = 119/282 (42%)
Query: 378 VQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVG 437
++V+D + L GH++ V D +GK+L + S D +++LWD + C+
Sbjct: 132 IKVWDYEAGDFERTLKGHTDSVQ--DISFDQTGKLL-ASCSADMTIKLWDFQGFECIRTM 188
Query: 438 TGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVW---------SFDGLSDDAEQPMNLKAKA 488
GH V +VA + +VS S D T+K+W +F G + +
Sbjct: 189 HGHDHNVSSVAIMPN-GDHIVSASRDKTMKMWEVATGYCVKTFTGHREWVRMVRPNQDGT 247
Query: 489 VVAAHGKD--INSLAVAPNDSLVCTGSQDRTA-CVWRLPDLVSVVTFRGHKRGIWSVEFS 545
++A+ D + VA + + C+ P+ S G + +
Sbjct: 248 LLASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPE--SAHPTISEATGSENKKSG 305
Query: 546 PVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLW 605
+++ S DKTIK+W IS G CL T GH + V F G +VSC D +++W
Sbjct: 306 KPGPFLLSGSRDKTIKMWDISTGMCLMTLVGHDNWVRGVLFHPGGRFVVSCADDKTLRIW 365
Query: 606 TVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLW 647
+ C+ T HE + +L K + TG D V +W
Sbjct: 366 DYKNKRCMKTLSAHEHFVTSLDFHKASPYVVTGSVDQTVKVW 407
Score = 211 (79.3 bits), Expect = 4.8e-14, P = 4.8e-14
Identities = 42/161 (26%), Positives = 74/161 (45%)
Query: 487 KAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSP 546
K ++ H + + P SL+ + S+D T VW T +GH + + F
Sbjct: 101 KYALSGHRSPVTRVIFHPVFSLMVSASEDATIKVWDYEAGDFERTLKGHTDSVQDISFDQ 160
Query: 547 VDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWT 606
+++ + S D TIK+W C++T GH +V + + G IVS D +K+W
Sbjct: 161 TGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTMKMWE 220
Query: 607 VRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLW 647
V TG C+ T+ H + + + + + A+ +D V +W
Sbjct: 221 VATGYCVKTFTGHREWVRMVRPNQDGTLLASCSNDQTVRVW 261
Score = 198 (74.8 bits), Expect = 1.4e-12, P = 1.4e-12
Identities = 43/138 (31%), Positives = 66/138 (47%)
Query: 514 QDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKT 573
Q R W +P GH+ + V F PV ++++AS D TIK+W G +T
Sbjct: 87 QKRDPKEW-IPRPPEKYALSGHRSPVTRVIFHPVFSLMVSASEDATIKVWDYEAGDFERT 145
Query: 574 FEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTE 633
+GHT SV SF G + SC AD +KLW + ECI T H+ + ++A+ +
Sbjct: 146 LKGHTDSVQDISFDQTGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGD 205
Query: 634 MFATGGSDALVNLWHDST 651
+ D + +W +T
Sbjct: 206 HIVSASRDKTMKMWEVAT 223
Score = 169 (64.5 bits), Expect = 2.5e-11, Sum P(2) = 2.5e-11
Identities = 33/105 (31%), Positives = 52/105 (49%)
Query: 114 GGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVW 173
G L + D+ + +WD+ G C GH V +LFHP + S +DD T+R+W
Sbjct: 308 GPFLLSGSRDKTIKMWDISTGMCLMTLVGHDNWVRGVLFHPGG--RFVVSCADDKTLRIW 365
Query: 174 DLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLR 218
D K+C+ TL H VTS+ +++ D+ V +W+ R
Sbjct: 366 DYKNKRCMKTLSAHEHFVTSLDFHKASPYVVTGSVDQTVKVWECR 410
Score = 161 (61.7 bits), Expect = 1.7e-08, P = 1.7e-08
Identities = 32/100 (32%), Positives = 51/100 (51%)
Query: 75 LFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGG 134
L S + I++WD+ST CL + GHD G+ HP G + + D+ + +WD
Sbjct: 311 LLSGSRDKTIKMWDISTGMCLMTLVGHDNWVRGVLFHPGGRFVVSCADDKTLRIWDYKNK 370
Query: 135 FCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWD 174
C H+ V+S+ FH + + +GS D TV+VW+
Sbjct: 371 RCMKTLSAHEHFVTSLDFHKASP--YVVTGSVDQTVKVWE 408
Score = 130 (50.8 bits), Expect = 1.1e-12, Sum P(2) = 1.1e-12
Identities = 30/127 (23%), Positives = 63/127 (49%)
Query: 31 GSFIA-CACGESINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWDL 89
G +A C+ +I + D T+ G ++++A+ P+ + S+ + +++W++
Sbjct: 162 GKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTMKMWEV 221
Query: 90 STLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSS 149
+T C++++ GH + + G LLA+ D+ V VW V C + H+ VV
Sbjct: 222 ATGYCVKTFTGHREWVRMVRPNQDGTLLASCSNDQTVRVWVVATKECKAELREHEHVVEC 281
Query: 150 ILFHPDT 156
I + P++
Sbjct: 282 ISWAPES 288
Score = 118 (46.6 bits), Expect = 1.1e-12, Sum P(2) = 1.1e-12
Identities = 22/70 (31%), Positives = 37/70 (52%)
Query: 161 LFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDY 220
L SGS D T+++WD+ C+ TL H + V + G ++S DK + +WD ++
Sbjct: 311 LLSGSRDKTIKMWDISTGMCLMTLVGHDNWVRGVLFHPGGRFVVSCADDKTLRIWDYKNK 370
Query: 221 SCKLTVPTYE 230
C T+ +E
Sbjct: 371 RCMKTLSAHE 380
Score = 70 (29.7 bits), Expect = 1.1e-19, Sum P(2) = 1.1e-19
Identities = 22/80 (27%), Positives = 39/80 (48%)
Query: 200 GSTLISAGRDKVVNLWDLRDYSCKLTVPTYE-MVEAVCAIPPGSAFDSFLSSYNQQTIK- 257
G L+S RDK + +WD+ C +T+ ++ V V PG F +S + +T++
Sbjct: 308 GPFLLSGSRDKTIKMWDISTGMCLMTLVGHDNWVRGVL-FHPGGRF--VVSCADDKTLRI 364
Query: 258 ---KKRRSLEI-----HFIT 269
K +R ++ HF+T
Sbjct: 365 WDYKNKRCMKTLSAHEHFVT 384
Score = 63 (27.2 bits), Expect = 2.5e-11, Sum P(2) = 2.5e-11
Identities = 15/79 (18%), Positives = 37/79 (46%)
Query: 25 LVVSSDGSFIACACGE-SINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSRE 83
+ + +G I A + ++ + +++ T G + + + + D LL S + +
Sbjct: 198 VAIMPNGDHIVSASRDKTMKMWEVATGYCVKTFTGHREWVRMVRPNQDGTLLASCSNDQT 257
Query: 84 IRVWDLSTLKCLRSWKGHD 102
+RVW ++T +C + H+
Sbjct: 258 VRVWVVATKECKAELREHE 276
Score = 37 (18.1 bits), Expect = 4.3e-17, Sum P(2) = 4.3e-17
Identities = 7/23 (30%), Positives = 10/23 (43%)
Query: 629 GKKTEMFATGGSDALVNLWHDST 651
GK +G D + +W ST
Sbjct: 305 GKPGPFLLSGSRDKTIKMWDIST 327
>UNIPROTKB|Q8TC44 [details] [associations]
symbol:POC1B "POC1 centriolar protein homolog B"
species:9606 "Homo sapiens" [GO:0005813 "centrosome" evidence=IDA]
[GO:0005814 "centriole" evidence=IDA] [GO:0042384 "cilium assembly"
evidence=IMP] [GO:0005932 "microtubule basal body" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
UniGene:Hs.25130 HOVERGEN:HBG057502 KO:K16482 HOGENOM:HOG000036743
CTD:282809 OrthoDB:EOG41VK2R EMBL:BC026080 EMBL:AK074772
IPI:IPI00152269 RefSeq:NP_758440.1 UniGene:Hs.604487
ProteinModelPortal:Q8TC44 SMR:Q8TC44 IntAct:Q8TC44 STRING:Q8TC44
PhosphoSite:Q8TC44 DMDM:74762610 PRIDE:Q8TC44 DNASU:282809
Ensembl:ENST00000313546 GeneID:282809 KEGG:hsa:282809
UCSC:uc001tba.3 GeneCards:GC12M089814 HGNC:HGNC:30836 HPA:HPA038841
MIM:614784 neXtProt:NX_Q8TC44 PharmGKB:PA165513299
InParanoid:Q8TC44 OMA:TASWDTF PhylomeDB:Q8TC44 ChiTaRS:POC1B
GenomeRNAi:282809 NextBio:93521 ArrayExpress:Q8TC44 Bgee:Q8TC44
CleanEx:HS_WDR51B Genevestigator:Q8TC44 GermOnline:ENSG00000139323
Uniprot:Q8TC44
Length = 478
Score = 263 (97.6 bits), Expect = 1.2e-19, P = 1.2e-19
Identities = 76/304 (25%), Positives = 135/304 (44%)
Query: 344 ILSKRLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLD 403
+L + G+ I L L + LA A+ + +++ + +Y GH ++V +
Sbjct: 9 VLERYFKGHKAAITSLD-LSPNGKQLATASWDTFLMLWNFKPHARAYRYVGHKDVVTSVQ 67
Query: 404 TCALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSD 463
S L+ + S+D +VRLW + R H V +V FS Q FL + S D
Sbjct: 68 ---FSPHGNLLASASRDRTVRLWIPDKRGKFSEFKAHTAPVRSVDFSADGQ-FLATASED 123
Query: 464 HTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRL 523
+IKVWS + + H + +P+ L+ + S+D+T +W
Sbjct: 124 KSIKVWSM----------YRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDT 173
Query: 524 PDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLR 583
+ V F V+F+P + +A D+T+K+W + L+ ++ H+ V
Sbjct: 174 TNKQCVNNFSDSVGFANFVDFNPSGTCIASAGSDQTVKVWDVRVNKLLQHYQVHSGGVNC 233
Query: 584 ASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDAL 643
SF G +++ +DG +K+ + G I T H ++ ++ K E+FA+GG+D
Sbjct: 234 ISFHPSGNYLITASSDGTLKILDLLEGRLIYTLQGHTGPVFTVSFSKGGELFASGGADTQ 293
Query: 644 VNLW 647
V LW
Sbjct: 294 VLLW 297
Score = 246 (91.7 bits), Expect = 9.8e-18, P = 9.8e-18
Identities = 58/199 (29%), Positives = 100/199 (50%)
Query: 28 SSDGSFIACACGE-SINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRV 86
S+DG F+A A + SI + + ++ + + SPD +L+ S + I++
Sbjct: 111 SADGQFLATASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKI 170
Query: 87 WDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGV 146
WD + +C+ ++ G A + +PSG +A+AG+D+ V VWDV +++ H G
Sbjct: 171 WDTTNKQCVNNFSDSVGFANFVDFNPSGTCIASAGSDQTVKVWDVRVNKLLQHYQVHSGG 230
Query: 147 VSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISA 206
V+ I FHP + L + S D T+++ DLL + + TL H V +++ + G S
Sbjct: 231 VNCISFHPSGN--YLITASSDGTLKILDLLEGRLIYTLQGHTGPVFTVSFSKGGELFASG 288
Query: 207 GRDKVVNLW--DLRDYSCK 223
G D V LW + + CK
Sbjct: 289 GADTQVLLWRTNFDELHCK 307
Score = 206 (77.6 bits), Expect = 2.7e-13, P = 2.7e-13
Identities = 54/212 (25%), Positives = 93/212 (43%)
Query: 13 EPVLQQFYGGGPLVVSS-----DGSFIACACGESINIV-DLSNASIKSTIEGGSDTITAL 66
+PVL++++ G ++S +G +A A ++ ++ + + G D +T++
Sbjct: 7 DPVLERYFKGHKAAITSLDLSPNGKQLATASWDTFLMLWNFKPHARAYRYVGHKDVVTSV 66
Query: 67 ALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKV 126
SP LL S+ R +R+W +K H P + G LATA D+ +
Sbjct: 67 QFSPHGNLLASASRDRTVRLWIPDKRGKFSEFKAHTAPVRSVDFSADGQFLATASEDKSI 126
Query: 127 LVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDK 186
VW + + H V F PD L+ S S+D T+++WD K+CV
Sbjct: 127 KVWSMYRQRFLYSLYRHTHWVRCAKFSPDG--RLIVSCSEDKTIKIWDTTNKQCVNNFSD 184
Query: 187 HFSRVTSMAITSDGSTLISAGRDKVVNLWDLR 218
+ G+ + SAG D+ V +WD+R
Sbjct: 185 SVGFANFVDFNPSGTCIASAGSDQTVKVWDVR 216
Score = 206 (77.6 bits), Expect = 2.7e-13, P = 2.7e-13
Identities = 71/264 (26%), Positives = 113/264 (42%)
Query: 348 RLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCAL 407
R VG+ + + ++F LA A+ V+++ H+ V +D A
Sbjct: 55 RYVGHKDVVTSVQF-SPHGNLLASASRDRTVRLWIPDKRGKFSEFKAHTAPVRSVDFSA- 112
Query: 408 SSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIK 467
G+ L T S+D S+++W + + H V FS +VS S D TIK
Sbjct: 113 -DGQFL-ATASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPD-GRLIVSCSEDKTIK 169
Query: 468 VWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLV 527
+W +Q +N + +V A+ D N P+ + + + D+T VW +
Sbjct: 170 IWDTTN-----KQCVNNFSDSVGFANFVDFN-----PSGTCIASAGSDQTVKVWDVRVNK 219
Query: 528 SVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFL 587
+ ++ H G+ + F P +ITAS D T+KI + +G + T +GHT V SF
Sbjct: 220 LLQHYQVHSGGVNCISFHPSGNYLITASSDGTLKILDLLEGRLIYTLQGHTGPVFTVSFS 279
Query: 588 TRGAQIVSCGADGLVKLWTVRTGE 611
G S GAD V LW E
Sbjct: 280 KGGELFASGGADTQVLLWRTNFDE 303
Score = 199 (75.1 bits), Expect = 1.6e-12, P = 1.6e-12
Identities = 48/168 (28%), Positives = 78/168 (46%)
Query: 57 EGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPSGGL 116
+G IT+L LSP+ K L ++ + +W+ + GH + P G L
Sbjct: 15 KGHKAAITSLDLSPNGKQLATASWDTFLMLWNFKPHARAYRYVGHKDVVTSVQFSPHGNL 74
Query: 117 LATAGADRKVLVW--DVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWD 174
LA+A DR V +W D G F FK H V S+ F D L + S+D +++VW
Sbjct: 75 LASASRDRTVRLWIPDKRGKFSE--FKAHTAPVRSVDF--SADGQFLATASEDKSIKVWS 130
Query: 175 LLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSC 222
+ ++ + +L +H V + DG ++S DK + +WD + C
Sbjct: 131 MYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQC 178
Score = 164 (62.8 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 50/165 (30%), Positives = 76/165 (46%)
Query: 96 RSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPD 155
R +KGH + P+G LATA D +++W+ + + GHK VV+S+ F P
Sbjct: 12 RYFKGHKAAITSLDLSPNGKQLATASWDTFLMLWNFKPHARAYRYVGHKDVVTSVQFSPH 71
Query: 156 TDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLW 215
+ LL S S D TVR+W + + H + V S+ ++DG L +A DK + +W
Sbjct: 72 GN--LLASASRDRTVRLWIPDKRGKFSEFKAHTAPVRSVDFSADGQFLATASEDKSIKVW 129
Query: 216 DLRDYSCKLTVPTYEMVEAV-CA--IPPGSAFDSFLSSYNQQTIK 257
+ Y + Y V CA P G +S +TIK
Sbjct: 130 SM--YRQRFLYSLYRHTHWVRCAKFSPDGRLI---VSCSEDKTIK 169
Score = 155 (59.6 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 37/155 (23%), Positives = 67/155 (43%)
Query: 63 ITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGA 122
+ ++ S D + L ++ + I+VW + + L S H P G L+ +
Sbjct: 105 VRSVDFSADGQFLATASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSE 164
Query: 123 DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVA 182
D+ + +WD C + F G + + F+P + + S D TV+VWD+ K +
Sbjct: 165 DKTIKIWDTTNKQCVNNFSDSVGFANFVDFNPSG--TCIASAGSDQTVKVWDVRVNKLLQ 222
Query: 183 TLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDL 217
H V ++ G+ LI+A D + + DL
Sbjct: 223 HYQVHSGGVNCISFHPSGNYLITASSDGTLKILDL 257
>TAIR|locus:2159562 [details] [associations]
symbol:AT5G08560 "AT5G08560" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0007062 "sister chromatid
cohesion" evidence=RCA] [GO:0007131 "reciprocal meiotic
recombination" evidence=RCA] [GO:0009630 "gravitropism"
evidence=RCA] [GO:0009887 "organ morphogenesis" evidence=RCA]
[GO:0009888 "tissue development" evidence=RCA] [GO:0010228
"vegetative to reproductive phase transition of meristem"
evidence=RCA] [GO:0010359 "regulation of anion channel activity"
evidence=RCA] [GO:0010413 "glucuronoxylan metabolic process"
evidence=RCA] [GO:0010638 "positive regulation of organelle
organization" evidence=RCA] [GO:0016926 "protein desumoylation"
evidence=RCA] [GO:0031048 "chromatin silencing by small RNA"
evidence=RCA] [GO:0033044 "regulation of chromosome organization"
evidence=RCA] [GO:0042138 "meiotic DNA double-strand break
formation" evidence=RCA] [GO:0045132 "meiotic chromosome
segregation" evidence=RCA] [GO:0045492 "xylan biosynthetic process"
evidence=RCA] [GO:0050665 "hydrogen peroxide biosynthetic process"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
EMBL:CP002688 GenomeReviews:BA000015_GR Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649 EMBL:AB006697
PROSITE:PS50897 InterPro:IPR006595 SMART:SM00668
HOGENOM:HOG000160946 OMA:IRGQFYQ EMBL:AY054535 EMBL:AY064639
IPI:IPI00526669 RefSeq:NP_001078546.1 RefSeq:NP_196473.1
UniGene:At.20607 ProteinModelPortal:Q9FNN2 SMR:Q9FNN2 IntAct:Q9FNN2
PaxDb:Q9FNN2 PRIDE:Q9FNN2 EnsemblPlants:AT5G08560.1
EnsemblPlants:AT5G08560.2 GeneID:830756 KEGG:ath:AT5G08560
TAIR:At5g08560 InParanoid:Q9FNN2 PhylomeDB:Q9FNN2
ProtClustDB:CLSN2687467 Genevestigator:Q9FNN2 Uniprot:Q9FNN2
Length = 589
Score = 197 (74.4 bits), Expect = 1.2e-19, Sum P(2) = 1.2e-19
Identities = 49/182 (26%), Positives = 91/182 (50%)
Query: 56 IEGGSDTITALALSPDDKLLFSSGHSREIRVWDLST---LKCLRSWKGHDGPAIGMACHP 112
+E +D + L S + K L SS + +W++S + + GH P I + P
Sbjct: 270 LESHTDEVWFLQFSHNGKYLASSSKDQTAIIWEISADGHISLKHTLVGHHKPVIAILWSP 329
Query: 113 SGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSIL--FHPDTDKSLLFSGSDDATV 170
+ T GA+ + WDVD G C H ++ KG +S I ++PD + +G D ++
Sbjct: 330 DDRQVLTCGAEEVIRRWDVDSGDCVHMYE--KGGISPISCGWYPDGQG--IIAGMTDRSI 385
Query: 171 RVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYE 230
+WDL ++ + +V+ +A+T DG L+S +D V++L+D R+ + + + +
Sbjct: 386 CMWDLDGREKECWKGQRTQKVSDIAMTDDGKWLVSVCKDSVISLFD-REATVERLIEEED 444
Query: 231 MV 232
M+
Sbjct: 445 MI 446
Score = 175 (66.7 bits), Expect = 1.0e-09, P = 1.0e-09
Identities = 48/158 (30%), Positives = 83/158 (52%)
Query: 25 LVVSSDGSFIACACGES-INIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSRE 83
+ ++ DG ++ C +S I++ D A+++ IE D IT+ +LS D+K + + ++E
Sbjct: 409 IAMTDDGKWLVSVCKDSVISLFD-REATVERLIEE-EDMITSFSLSNDNKYILVNLLNQE 466
Query: 84 IRVWDLS-TLKCLRSWKGHDGPA-IGMACHPSGG----LLATAGADRKVLVWDVDGGFCT 137
IR+W++ K + +KGH I +C GG +A+ D +V +W G
Sbjct: 467 IRLWNIEGDPKIVSRYKGHKRSRFIIRSCF--GGYKQAFIASGSEDSQVYIWHRSTGKLI 524
Query: 138 HYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDL 175
GH G V+ + + P T+ +L S SDD T+R+W L
Sbjct: 525 VELPGHAGAVNCVSWSP-TNLHMLASASDDGTIRIWGL 561
Score = 163 (62.4 bits), Expect = 2.1e-10, Sum P(2) = 2.1e-10
Identities = 52/199 (26%), Positives = 99/199 (49%)
Query: 25 LVVSSDGSFIACACGESINIV-DLS---NASIKSTIEGGSDTITALALSPDDKLLFSSGH 80
L S +G ++A + + I+ ++S + S+K T+ G + A+ SPDD+ + + G
Sbjct: 280 LQFSHNGKYLASSSKDQTAIIWEISADGHISLKHTLVGHHKPVIAILWSPDDRQVLTCGA 339
Query: 81 SREIRVWDLSTLKCLRSW-KGHDGPAIGMACHPSG-GLLATAGADRKVLVWDVDGGFCTH 138
IR WD+ + C+ + KG P I +P G G++A DR + +WD+DG
Sbjct: 340 EEVIRRWDVDSGDCVHMYEKGGISP-ISCGWYPDGQGIIAGM-TDRSICMWDLDGRE-KE 396
Query: 139 YFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITS 198
+KG + S + D K L+ S D+ + ++D A V L + +TS ++++
Sbjct: 397 CWKGQRTQKVSDIAMTDDGKWLV-SVCKDSVISLFDREAT--VERLIEEEDMITSFSLSN 453
Query: 199 DGSTLISAGRDKVVNLWDL 217
D ++ ++ + LW++
Sbjct: 454 DNKYILVNLLNQEIRLWNI 472
Score = 162 (62.1 bits), Expect = 2.6e-08, P = 2.6e-08
Identities = 70/334 (20%), Positives = 144/334 (43%)
Query: 323 TADQQLLLYTTVEVPEKKMELILSKRLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYD 382
T D L LY+ + + ++ ++ L + +E+ L+F +YLA ++ + +++
Sbjct: 244 TLDSDLSLYSDHQCGKHQIPSQTAQILESHTDEVWFLQF-SHNGKYLASSSKDQTAIIWE 302
Query: 383 LSS---MSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTG 439
+S+ +S + L GH + V+ + S ++T + +R WD +S CV +
Sbjct: 303 ISADGHISLKHTLVGHHKPVIAI---LWSPDDRQVLTCGAEEVIRRWDVDSGDCVHMY-- 357
Query: 440 HMGAVGAVAFSKKLQNF-LVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDIN 498
G + ++ +++G +D +I +W DG + + + + +A D
Sbjct: 358 EKGGISPISCGWYPDGQGIIAGMTDRSICMWDLDGREKECWKGQRTQKVSDIAMTD-DGK 416
Query: 499 SLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDK 558
L DS++ DR A V RL + ++T S S ++ ++ ++
Sbjct: 417 WLVSVCKDSVISLF--DREATVERLIEEEDMIT---------SFSLSNDNKYILVNLLNQ 465
Query: 559 TIKIWSIS-DGSCLKTFEGHTSS--VLRASFLT-RGAQIVSCGADGLVKLWTVRTGECIA 614
I++W+I D + ++GH S ++R+ F + A I S D V +W TG+ I
Sbjct: 466 EIRLWNIEGDPKIVSRYKGHKRSRFIIRSCFGGYKQAFIASGSEDSQVYIWHRSTGKLIV 525
Query: 615 TYDKHEDKIWALAVGKKT-EMFATGGSDALVNLW 647
H + ++ M A+ D + +W
Sbjct: 526 ELPGHAGAVNCVSWSPTNLHMLASASDDGTIRIW 559
Score = 119 (46.9 bits), Expect = 1.2e-19, Sum P(2) = 1.2e-19
Identities = 31/137 (22%), Positives = 66/137 (48%)
Query: 347 KRLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSS---MSCSYVLAGHSEIVLCLD 403
+RL+ E+++ L + +Y+ V ++++++++ + Y GH +
Sbjct: 437 ERLIE-EEDMITSFSLSNDNKYILVNLLNQEIRLWNIEGDPKIVSRY--KGHKRSRFIIR 493
Query: 404 TCALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSD 463
+C + I +GS+D+ V +W + + GH GAV V++S + L S S D
Sbjct: 494 SCFGGYKQAFIASGSEDSQVYIWHRSTGKLIVELPGHAGAVNCVSWSPTNLHMLASASDD 553
Query: 464 HTIKVWSFDGLSDDAEQ 480
TI++W D ++ ++
Sbjct: 554 GTIRIWGLDRINQQNQK 570
Score = 66 (28.3 bits), Expect = 4.0e-14, Sum P(2) = 4.0e-14
Identities = 28/114 (24%), Positives = 46/114 (40%)
Query: 406 ALSSGKILIVTGSKDNSVRLWDSESRC-CVGVGTGHMGAVGAV--AFSKKLQNFLVSGSS 462
+LS+ I+ + +RLW+ E V GH + + F Q F+ SGS
Sbjct: 450 SLSNDNKYILVNLLNQEIRLWNIEGDPKIVSRYKGHKRSRFIIRSCFGGYKQAFIASGSE 509
Query: 463 DHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDR 516
D + +W E P + A V+ +++ LA A +D + DR
Sbjct: 510 DSQVYIWHRSTGKLIVELPGHAGAVNCVSWSPTNLHMLASASDDGTIRIWGLDR 563
Score = 52 (23.4 bits), Expect = 0.00032, Sum P(2) = 0.00032
Identities = 16/70 (22%), Positives = 31/70 (44%)
Query: 149 SILFHPDTDKSL-LFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAG 207
S +FH D L L+S ++ A+ L+ H V + + +G L S+
Sbjct: 238 SCVFHNTLDSDLSLYSDHQCGKHQIPSQTAQ----ILESHTDEVWFLQFSHNGKYLASSS 293
Query: 208 RDKVVNLWDL 217
+D+ +W++
Sbjct: 294 KDQTAIIWEI 303
>UNIPROTKB|A5D7P3 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9913 "Bos taurus" [GO:0051219
"phosphoprotein binding" evidence=IEA] [GO:0051081 "nuclear
envelope disassembly" evidence=IEA] [GO:0050885 "neuromuscular
process controlling balance" evidence=IEA] [GO:0048854 "brain
morphogenesis" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0047496 "vesicle transport along
microtubule" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0045502 "dynein binding" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0036035 "osteoclast development" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0031512
"motile primary cilium" evidence=IEA] [GO:0031252 "cell leading
edge" evidence=IEA] [GO:0031023 "microtubule organizing center
organization" evidence=IEA] [GO:0030036 "actin cytoskeleton
organization" evidence=IEA] [GO:0021819 "layer formation in
cerebral cortex" evidence=IEA] [GO:0021766 "hippocampus
development" evidence=IEA] [GO:0021540 "corpus callosum
morphogenesis" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0008344 "adult locomotory behavior" evidence=IEA]
[GO:0008090 "retrograde axon cargo transport" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] [GO:0007611
"learning or memory" evidence=IEA] [GO:0007405 "neuroblast
proliferation" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IEA] [GO:0005938 "cell cortex" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0001961 "positive regulation of cytokine-mediated signaling
pathway" evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
[GO:0001675 "acrosome assembly" evidence=IEA] [GO:0001667
"ameboidal cell migration" evidence=IEA] [GO:0000776 "kinetochore"
evidence=IEA] [GO:0000235 "astral microtubule" evidence=IEA]
[GO:0000132 "establishment of mitotic spindle orientation"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005938 GO:GO:0000132 GO:GO:0005635 GO:GO:0005813
GO:GO:0048471 GO:GO:0021766 GO:GO:0001764 GO:GO:0005875
GO:GO:0031252 GO:GO:0000776 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030036 GO:GO:0007268 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885 GO:GO:0007611
GO:GO:0007405 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0001675 GO:GO:0000235 GO:GO:0032319 GO:GO:0031023
GO:GO:0048854 GO:GO:0021540 GO:GO:0021819 GO:GO:0047496
GO:GO:0031512 GeneTree:ENSGT00700000104282 HOVERGEN:HBG006271
OMA:WVRGLAF InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 IPI:IPI00703460 UniGene:Bt.111460 GO:GO:0051081
EMBL:DAAA02048674 EMBL:DAAA02048675 EMBL:DAAA02048676 EMBL:BC140633
SMR:A5D7P3 STRING:A5D7P3 Ensembl:ENSBTAT00000055329 Uniprot:A5D7P3
Length = 410
Score = 254 (94.5 bits), Expect = 6.1e-19, P = 6.1e-19
Identities = 64/236 (27%), Positives = 104/236 (44%)
Query: 53 KSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHP 112
K + G +T + P ++ S+ I+VWD T R+ KGH ++
Sbjct: 101 KYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDH 160
Query: 113 SGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRV 172
SG LLA+ AD + +WD G C GH VSS+ P+ D + S S D T+++
Sbjct: 161 SGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDH--IVSASRDKTIKM 218
Query: 173 WDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYEMV 232
W++ CV T H V + DG+ + S D+ V +W + CK + +E V
Sbjct: 219 WEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHV 278
Query: 233 EAVCAIPPGSAFDSFLSSYNQQTIKKKRRSLEIHFITVGERG-IVRMWNADSA-CL 286
+ P S++ S + +T K + F+ G R ++MW+ + CL
Sbjct: 279 VECISWAPESSYSSISEATGSETKKSGKPG---PFLLSGSRDKTIKMWDVSTGMCL 331
Score = 240 (89.5 bits), Expect = 7.6e-17, Sum P(2) = 7.6e-17
Identities = 65/205 (31%), Positives = 92/205 (44%)
Query: 438 TGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDI 497
+GH V V F + +VS S D TIKVW ++ + D E+ LK H +
Sbjct: 105 SGHRSPVTRVIFHPVF-SVMVSASEDATIKVWDYE--TGDFER--TLKG------HTDSV 153
Query: 498 NSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGD 557
++ + L+ + S D T +W + T GH + SV P +++AS D
Sbjct: 154 QDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRD 213
Query: 558 KTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYD 617
KTIK+W + G C+KTF GH V G I SC D V++W V T EC A
Sbjct: 214 KTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELR 273
Query: 618 KHEDKI----WALAVGKKTEMFATG 638
+HE + WA + ATG
Sbjct: 274 EHEHVVECISWAPESSYSSISEATG 298
Score = 239 (89.2 bits), Expect = 1.2e-19, Sum P(2) = 1.2e-19
Identities = 46/147 (31%), Positives = 79/147 (53%)
Query: 41 SINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKG 100
+I + D + T++G +D++ ++ KLL S I++WD +C+R+ G
Sbjct: 131 TIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHG 190
Query: 101 HDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSL 160
HD +A P+G + +A D+ + +W+V G+C F GH+ V + P+ D +L
Sbjct: 191 HDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMV--RPNQDGTL 248
Query: 161 LFSGSDDATVRVWDLLAKKCVATLDKH 187
+ S S+D TVRVW + K+C A L +H
Sbjct: 249 IASCSNDQTVRVWVVATKECKAELREH 275
Score = 228 (85.3 bits), Expect = 5.8e-16, P = 5.8e-16
Identities = 73/282 (25%), Positives = 121/282 (42%)
Query: 378 VQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVG 437
++V+D + L GH++ V D SGK+L + S D +++LWD + C+
Sbjct: 132 IKVWDYETGDFERTLKGHTDSVQ--DISFDHSGKLL-ASCSADMTIKLWDFQGFECIRTM 188
Query: 438 TGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVW---------SFDGLSDDAEQPMNLKAKA 488
GH V +VA + +VS S D TIK+W +F G + +
Sbjct: 189 HGHDHNVSSVAIMPN-GDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGT 247
Query: 489 VVAAHGKD--INSLAVAPNDSLVCTGSQDRTA-CVWRLPDLVSVVTFRGHKRGIWSVEFS 545
++A+ D + VA + + C+ P+ S + G + +
Sbjct: 248 LIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPE--SSYSSISEATGSETKKSG 305
Query: 546 PVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLW 605
+++ S DKTIK+W +S G CL T GH + V F + G I+SC D +++W
Sbjct: 306 KPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVW 365
Query: 606 TVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLW 647
+ C+ T + HE + +L K TG D V +W
Sbjct: 366 DYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 407
Score = 218 (81.8 bits), Expect = 7.9e-15, P = 7.9e-15
Identities = 61/272 (22%), Positives = 119/272 (43%)
Query: 347 KRLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCA 406
+ L G+ + + D+ F + LA + ++++D C + GH V + A
Sbjct: 144 RTLKGHTDSVQDISF-DHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNV---SSVA 199
Query: 407 LSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTI 466
+ IV+ S+D ++++W+ ++ CV TGH V V ++ + S S+D T+
Sbjct: 200 IMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQD-GTLIASCSNDQTV 258
Query: 467 KVWSFDGLSDDAE-QPMNLKAKAVVAAHGKDINSLAVAPNDS---------LVCTGSQDR 516
+VW AE + + + A +S++ A + +GS+D+
Sbjct: 259 RVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDK 318
Query: 517 TACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEG 576
T +W + + ++T GH + V F + +++ + DKT+++W + C+KT
Sbjct: 319 TIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNA 378
Query: 577 HTSSVLRASFLTRGAQIVSCGADGLVKLWTVR 608
H V F +V+ D VK+W R
Sbjct: 379 HEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
Score = 210 (79.0 bits), Expect = 6.3e-14, P = 6.3e-14
Identities = 41/161 (25%), Positives = 75/161 (46%)
Query: 487 KAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSP 546
K ++ H + + P S++ + S+D T VW T +GH + + F
Sbjct: 101 KYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDH 160
Query: 547 VDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWT 606
+++ + S D TIK+W C++T GH +V + + G IVS D +K+W
Sbjct: 161 SGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWE 220
Query: 607 VRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLW 647
V+TG C+ T+ H + + + + + A+ +D V +W
Sbjct: 221 VQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVW 261
Score = 202 (76.2 bits), Expect = 4.9e-13, P = 4.9e-13
Identities = 44/138 (31%), Positives = 65/138 (47%)
Query: 514 QDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKT 573
Q R W +P GH+ + V F PV V+++AS D TIK+W G +T
Sbjct: 87 QKRDPKEW-IPRPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERT 145
Query: 574 FEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTE 633
+GHT SV SF G + SC AD +KLW + ECI T H+ + ++A+ +
Sbjct: 146 LKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGD 205
Query: 634 MFATGGSDALVNLWHDST 651
+ D + +W T
Sbjct: 206 HIVSASRDKTIKMWEVQT 223
Score = 170 (64.9 bits), Expect = 1.9e-11, Sum P(2) = 1.9e-11
Identities = 34/105 (32%), Positives = 53/105 (50%)
Query: 114 GGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVW 173
G L + D+ + +WDV G C GH V +LFH + + S +DD T+RVW
Sbjct: 308 GPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFH--SGGKFILSCADDKTLRVW 365
Query: 174 DLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLR 218
D K+C+ TL+ H VTS+ +++ D+ V +W+ R
Sbjct: 366 DYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
Score = 155 (59.6 bits), Expect = 8.0e-08, P = 8.0e-08
Identities = 38/133 (28%), Positives = 62/133 (46%)
Query: 42 INIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGH 101
+ + + S S+I + + T + P LL S + I++WD+ST CL + GH
Sbjct: 279 VECISWAPESSYSSISEATGSETKKSGKPGPFLL-SGSRDKTIKMWDVSTGMCLMTLVGH 337
Query: 102 DGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLL 161
D G+ H G + + D+ + VWD C H+ V+S+ FH +
Sbjct: 338 DNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAP--YV 395
Query: 162 FSGSDDATVRVWD 174
+GS D TV+VW+
Sbjct: 396 VTGSVDQTVKVWE 408
Score = 134 (52.2 bits), Expect = 2.0e-13, Sum P(2) = 2.0e-13
Identities = 32/140 (22%), Positives = 66/140 (47%)
Query: 31 GSFIA-CACGESINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWDL 89
G +A C+ +I + D T+ G ++++A+ P+ + S+ + I++W++
Sbjct: 162 GKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEV 221
Query: 90 STLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSS 149
T C++++ GH + + G L+A+ D+ V VW V C + H+ VV
Sbjct: 222 QTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVEC 281
Query: 150 ILFHPDTDKSLLFSGSDDAT 169
I + P++ S + + T
Sbjct: 282 ISWAPESSYSSISEATGSET 301
Score = 121 (47.7 bits), Expect = 2.0e-13, Sum P(2) = 2.0e-13
Identities = 23/70 (32%), Positives = 38/70 (54%)
Query: 161 LFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDY 220
L SGS D T+++WD+ C+ TL H + V + S G ++S DK + +WD ++
Sbjct: 311 LLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNK 370
Query: 221 SCKLTVPTYE 230
C T+ +E
Sbjct: 371 RCMKTLNAHE 380
Score = 65 (27.9 bits), Expect = 1.2e-19, Sum P(2) = 1.2e-19
Identities = 22/80 (27%), Positives = 38/80 (47%)
Query: 200 GSTLISAGRDKVVNLWDLRDYSCKLTVPTYE-MVEAVCAIPPGSAFDSFLSSYNQQTIK- 257
G L+S RDK + +WD+ C +T+ ++ V V G F LS + +T++
Sbjct: 308 GPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVL-FHSGGKF--ILSCADDKTLRV 364
Query: 258 ---KKRRSLEI-----HFIT 269
K +R ++ HF+T
Sbjct: 365 WDYKNKRCMKTLNAHEHFVT 384
Score = 63 (27.2 bits), Expect = 1.9e-11, Sum P(2) = 1.9e-11
Identities = 15/79 (18%), Positives = 36/79 (45%)
Query: 25 LVVSSDGSFIACACGE-SINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSRE 83
+ + +G I A + +I + ++ T G + + + + D L+ S + +
Sbjct: 198 VAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQT 257
Query: 84 IRVWDLSTLKCLRSWKGHD 102
+RVW ++T +C + H+
Sbjct: 258 VRVWVVATKECKAELREHE 276
Score = 37 (18.1 bits), Expect = 7.6e-17, Sum P(2) = 7.6e-17
Identities = 7/23 (30%), Positives = 10/23 (43%)
Query: 629 GKKTEMFATGGSDALVNLWHDST 651
GK +G D + +W ST
Sbjct: 305 GKPGPFLLSGSRDKTIKMWDVST 327
>UNIPROTKB|E2QY31 [details] [associations]
symbol:PAFAH1B1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0051301 "cell division" evidence=IEA]
[GO:0007067 "mitosis" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0005874 "microtubule" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005737 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013720 Pfam:PF08513
GO:GO:0005874 GeneTree:ENSGT00700000104282 KO:K01062 OMA:WVRGLAF
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
CTD:5048 EMBL:AAEX03006704 RefSeq:XP_854482.1
ProteinModelPortal:E2QY31 SMR:E2QY31 PRIDE:E2QY31
Ensembl:ENSCAFT00000030661 GeneID:480656 KEGG:cfa:480656
NextBio:20855646 Uniprot:E2QY31
Length = 410
Score = 254 (94.5 bits), Expect = 6.1e-19, P = 6.1e-19
Identities = 64/236 (27%), Positives = 104/236 (44%)
Query: 53 KSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHP 112
K + G +T + P ++ S+ I+VWD T R+ KGH ++
Sbjct: 101 KYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDH 160
Query: 113 SGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRV 172
SG LLA+ AD + +WD G C GH VSS+ P+ D + S S D T+++
Sbjct: 161 SGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDH--IVSASRDKTIKM 218
Query: 173 WDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYEMV 232
W++ CV T H V + DG+ + S D+ V +W + CK + +E V
Sbjct: 219 WEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHV 278
Query: 233 EAVCAIPPGSAFDSFLSSYNQQTIKKKRRSLEIHFITVGERG-IVRMWNADSA-CL 286
+ P S++ S + +T K + F+ G R ++MW+ + CL
Sbjct: 279 VECISWAPESSYSSISEATGSETKKSGKPG---PFLLSGSRDKTIKMWDVSTGMCL 331
Score = 240 (89.5 bits), Expect = 7.6e-17, Sum P(2) = 7.6e-17
Identities = 65/205 (31%), Positives = 92/205 (44%)
Query: 438 TGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDI 497
+GH V V F + +VS S D TIKVW ++ + D E+ LK H +
Sbjct: 105 SGHRSPVTRVIFHPVF-SVMVSASEDATIKVWDYE--TGDFER--TLKG------HTDSV 153
Query: 498 NSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGD 557
++ + L+ + S D T +W + T GH + SV P +++AS D
Sbjct: 154 QDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRD 213
Query: 558 KTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYD 617
KTIK+W + G C+KTF GH V G I SC D V++W V T EC A
Sbjct: 214 KTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELR 273
Query: 618 KHEDKI----WALAVGKKTEMFATG 638
+HE + WA + ATG
Sbjct: 274 EHEHVVECISWAPESSYSSISEATG 298
Score = 239 (89.2 bits), Expect = 1.2e-19, Sum P(2) = 1.2e-19
Identities = 46/147 (31%), Positives = 79/147 (53%)
Query: 41 SINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKG 100
+I + D + T++G +D++ ++ KLL S I++WD +C+R+ G
Sbjct: 131 TIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHG 190
Query: 101 HDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSL 160
HD +A P+G + +A D+ + +W+V G+C F GH+ V + P+ D +L
Sbjct: 191 HDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMV--RPNQDGTL 248
Query: 161 LFSGSDDATVRVWDLLAKKCVATLDKH 187
+ S S+D TVRVW + K+C A L +H
Sbjct: 249 IASCSNDQTVRVWVVATKECKAELREH 275
Score = 228 (85.3 bits), Expect = 5.8e-16, P = 5.8e-16
Identities = 73/282 (25%), Positives = 121/282 (42%)
Query: 378 VQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVG 437
++V+D + L GH++ V D SGK+L + S D +++LWD + C+
Sbjct: 132 IKVWDYETGDFERTLKGHTDSVQ--DISFDHSGKLL-ASCSADMTIKLWDFQGFECIRTM 188
Query: 438 TGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVW---------SFDGLSDDAEQPMNLKAKA 488
GH V +VA + +VS S D TIK+W +F G + +
Sbjct: 189 HGHDHNVSSVAIMPN-GDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGT 247
Query: 489 VVAAHGKD--INSLAVAPNDSLVCTGSQDRTA-CVWRLPDLVSVVTFRGHKRGIWSVEFS 545
++A+ D + VA + + C+ P+ S + G + +
Sbjct: 248 LIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPE--SSYSSISEATGSETKKSG 305
Query: 546 PVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLW 605
+++ S DKTIK+W +S G CL T GH + V F + G I+SC D +++W
Sbjct: 306 KPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVW 365
Query: 606 TVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLW 647
+ C+ T + HE + +L K TG D V +W
Sbjct: 366 DYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 407
Score = 218 (81.8 bits), Expect = 7.9e-15, P = 7.9e-15
Identities = 61/272 (22%), Positives = 119/272 (43%)
Query: 347 KRLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCA 406
+ L G+ + + D+ F + LA + ++++D C + GH V + A
Sbjct: 144 RTLKGHTDSVQDISF-DHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNV---SSVA 199
Query: 407 LSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTI 466
+ IV+ S+D ++++W+ ++ CV TGH V V ++ + S S+D T+
Sbjct: 200 IMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQD-GTLIASCSNDQTV 258
Query: 467 KVWSFDGLSDDAE-QPMNLKAKAVVAAHGKDINSLAVAPNDS---------LVCTGSQDR 516
+VW AE + + + A +S++ A + +GS+D+
Sbjct: 259 RVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDK 318
Query: 517 TACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEG 576
T +W + + ++T GH + V F + +++ + DKT+++W + C+KT
Sbjct: 319 TIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNA 378
Query: 577 HTSSVLRASFLTRGAQIVSCGADGLVKLWTVR 608
H V F +V+ D VK+W R
Sbjct: 379 HEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
Score = 210 (79.0 bits), Expect = 6.3e-14, P = 6.3e-14
Identities = 41/161 (25%), Positives = 75/161 (46%)
Query: 487 KAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSP 546
K ++ H + + P S++ + S+D T VW T +GH + + F
Sbjct: 101 KYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDH 160
Query: 547 VDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWT 606
+++ + S D TIK+W C++T GH +V + + G IVS D +K+W
Sbjct: 161 SGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWE 220
Query: 607 VRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLW 647
V+TG C+ T+ H + + + + + A+ +D V +W
Sbjct: 221 VQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVW 261
Score = 202 (76.2 bits), Expect = 4.9e-13, P = 4.9e-13
Identities = 44/138 (31%), Positives = 65/138 (47%)
Query: 514 QDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKT 573
Q R W +P GH+ + V F PV V+++AS D TIK+W G +T
Sbjct: 87 QKRDPKEW-IPRPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERT 145
Query: 574 FEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTE 633
+GHT SV SF G + SC AD +KLW + ECI T H+ + ++A+ +
Sbjct: 146 LKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGD 205
Query: 634 MFATGGSDALVNLWHDST 651
+ D + +W T
Sbjct: 206 HIVSASRDKTIKMWEVQT 223
Score = 170 (64.9 bits), Expect = 1.9e-11, Sum P(2) = 1.9e-11
Identities = 34/105 (32%), Positives = 53/105 (50%)
Query: 114 GGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVW 173
G L + D+ + +WDV G C GH V +LFH + + S +DD T+RVW
Sbjct: 308 GPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFH--SGGKFILSCADDKTLRVW 365
Query: 174 DLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLR 218
D K+C+ TL+ H VTS+ +++ D+ V +W+ R
Sbjct: 366 DYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
Score = 155 (59.6 bits), Expect = 8.0e-08, P = 8.0e-08
Identities = 38/133 (28%), Positives = 62/133 (46%)
Query: 42 INIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGH 101
+ + + S S+I + + T + P LL S + I++WD+ST CL + GH
Sbjct: 279 VECISWAPESSYSSISEATGSETKKSGKPGPFLL-SGSRDKTIKMWDVSTGMCLMTLVGH 337
Query: 102 DGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLL 161
D G+ H G + + D+ + VWD C H+ V+S+ FH +
Sbjct: 338 DNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAP--YV 395
Query: 162 FSGSDDATVRVWD 174
+GS D TV+VW+
Sbjct: 396 VTGSVDQTVKVWE 408
Score = 134 (52.2 bits), Expect = 2.0e-13, Sum P(2) = 2.0e-13
Identities = 32/140 (22%), Positives = 66/140 (47%)
Query: 31 GSFIA-CACGESINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWDL 89
G +A C+ +I + D T+ G ++++A+ P+ + S+ + I++W++
Sbjct: 162 GKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEV 221
Query: 90 STLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSS 149
T C++++ GH + + G L+A+ D+ V VW V C + H+ VV
Sbjct: 222 QTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVEC 281
Query: 150 ILFHPDTDKSLLFSGSDDAT 169
I + P++ S + + T
Sbjct: 282 ISWAPESSYSSISEATGSET 301
Score = 121 (47.7 bits), Expect = 2.0e-13, Sum P(2) = 2.0e-13
Identities = 23/70 (32%), Positives = 38/70 (54%)
Query: 161 LFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDY 220
L SGS D T+++WD+ C+ TL H + V + S G ++S DK + +WD ++
Sbjct: 311 LLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNK 370
Query: 221 SCKLTVPTYE 230
C T+ +E
Sbjct: 371 RCMKTLNAHE 380
Score = 65 (27.9 bits), Expect = 1.2e-19, Sum P(2) = 1.2e-19
Identities = 22/80 (27%), Positives = 38/80 (47%)
Query: 200 GSTLISAGRDKVVNLWDLRDYSCKLTVPTYE-MVEAVCAIPPGSAFDSFLSSYNQQTIK- 257
G L+S RDK + +WD+ C +T+ ++ V V G F LS + +T++
Sbjct: 308 GPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVL-FHSGGKF--ILSCADDKTLRV 364
Query: 258 ---KKRRSLEI-----HFIT 269
K +R ++ HF+T
Sbjct: 365 WDYKNKRCMKTLNAHEHFVT 384
Score = 63 (27.2 bits), Expect = 1.9e-11, Sum P(2) = 1.9e-11
Identities = 15/79 (18%), Positives = 36/79 (45%)
Query: 25 LVVSSDGSFIACACGE-SINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSRE 83
+ + +G I A + +I + ++ T G + + + + D L+ S + +
Sbjct: 198 VAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQT 257
Query: 84 IRVWDLSTLKCLRSWKGHD 102
+RVW ++T +C + H+
Sbjct: 258 VRVWVVATKECKAELREHE 276
Score = 37 (18.1 bits), Expect = 7.6e-17, Sum P(2) = 7.6e-17
Identities = 7/23 (30%), Positives = 10/23 (43%)
Query: 629 GKKTEMFATGGSDALVNLWHDST 651
GK +G D + +W ST
Sbjct: 305 GKPGPFLLSGSRDKTIKMWDVST 327
>UNIPROTKB|J9P388 [details] [associations]
symbol:PAFAH1B1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0051301 "cell division" evidence=IEA]
[GO:0007067 "mitosis" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0005874 "microtubule" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005737 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013720 Pfam:PF08513
GO:GO:0005874 GeneTree:ENSGT00700000104282 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:AAEX03006704
Ensembl:ENSCAFT00000046041 Uniprot:J9P388
Length = 410
Score = 254 (94.5 bits), Expect = 6.1e-19, P = 6.1e-19
Identities = 64/236 (27%), Positives = 104/236 (44%)
Query: 53 KSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHP 112
K + G +T + P ++ S+ I+VWD T R+ KGH ++
Sbjct: 101 KYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDH 160
Query: 113 SGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRV 172
SG LLA+ AD + +WD G C GH VSS+ P+ D + S S D T+++
Sbjct: 161 SGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDH--IVSASRDKTIKM 218
Query: 173 WDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYEMV 232
W++ CV T H V + DG+ + S D+ V +W + CK + +E V
Sbjct: 219 WEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHV 278
Query: 233 EAVCAIPPGSAFDSFLSSYNQQTIKKKRRSLEIHFITVGERG-IVRMWNADSA-CL 286
+ P S++ S + +T K + F+ G R ++MW+ + CL
Sbjct: 279 VECISWAPESSYSSISEATGSETKKSGKPG---PFLLSGSRDKTIKMWDVSTGMCL 331
Score = 240 (89.5 bits), Expect = 7.6e-17, Sum P(2) = 7.6e-17
Identities = 65/205 (31%), Positives = 92/205 (44%)
Query: 438 TGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDI 497
+GH V V F + +VS S D TIKVW ++ + D E+ LK H +
Sbjct: 105 SGHRSPVTRVIFHPVF-SVMVSASEDATIKVWDYE--TGDFER--TLKG------HTDSV 153
Query: 498 NSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGD 557
++ + L+ + S D T +W + T GH + SV P +++AS D
Sbjct: 154 QDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRD 213
Query: 558 KTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYD 617
KTIK+W + G C+KTF GH V G I SC D V++W V T EC A
Sbjct: 214 KTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELR 273
Query: 618 KHEDKI----WALAVGKKTEMFATG 638
+HE + WA + ATG
Sbjct: 274 EHEHVVECISWAPESSYSSISEATG 298
Score = 239 (89.2 bits), Expect = 1.2e-19, Sum P(2) = 1.2e-19
Identities = 46/147 (31%), Positives = 79/147 (53%)
Query: 41 SINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKG 100
+I + D + T++G +D++ ++ KLL S I++WD +C+R+ G
Sbjct: 131 TIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHG 190
Query: 101 HDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSL 160
HD +A P+G + +A D+ + +W+V G+C F GH+ V + P+ D +L
Sbjct: 191 HDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMV--RPNQDGTL 248
Query: 161 LFSGSDDATVRVWDLLAKKCVATLDKH 187
+ S S+D TVRVW + K+C A L +H
Sbjct: 249 IASCSNDQTVRVWVVATKECKAELREH 275
Score = 228 (85.3 bits), Expect = 5.8e-16, P = 5.8e-16
Identities = 73/282 (25%), Positives = 121/282 (42%)
Query: 378 VQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVG 437
++V+D + L GH++ V D SGK+L + S D +++LWD + C+
Sbjct: 132 IKVWDYETGDFERTLKGHTDSVQ--DISFDHSGKLL-ASCSADMTIKLWDFQGFECIRTM 188
Query: 438 TGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVW---------SFDGLSDDAEQPMNLKAKA 488
GH V +VA + +VS S D TIK+W +F G + +
Sbjct: 189 HGHDHNVSSVAIMPN-GDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGT 247
Query: 489 VVAAHGKD--INSLAVAPNDSLVCTGSQDRTA-CVWRLPDLVSVVTFRGHKRGIWSVEFS 545
++A+ D + VA + + C+ P+ S + G + +
Sbjct: 248 LIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPE--SSYSSISEATGSETKKSG 305
Query: 546 PVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLW 605
+++ S DKTIK+W +S G CL T GH + V F + G I+SC D +++W
Sbjct: 306 KPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVW 365
Query: 606 TVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLW 647
+ C+ T + HE + +L K TG D V +W
Sbjct: 366 DYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 407
Score = 218 (81.8 bits), Expect = 7.9e-15, P = 7.9e-15
Identities = 61/272 (22%), Positives = 119/272 (43%)
Query: 347 KRLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCA 406
+ L G+ + + D+ F + LA + ++++D C + GH V + A
Sbjct: 144 RTLKGHTDSVQDISF-DHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNV---SSVA 199
Query: 407 LSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTI 466
+ IV+ S+D ++++W+ ++ CV TGH V V ++ + S S+D T+
Sbjct: 200 IMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQD-GTLIASCSNDQTV 258
Query: 467 KVWSFDGLSDDAE-QPMNLKAKAVVAAHGKDINSLAVAPNDS---------LVCTGSQDR 516
+VW AE + + + A +S++ A + +GS+D+
Sbjct: 259 RVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDK 318
Query: 517 TACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEG 576
T +W + + ++T GH + V F + +++ + DKT+++W + C+KT
Sbjct: 319 TIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNA 378
Query: 577 HTSSVLRASFLTRGAQIVSCGADGLVKLWTVR 608
H V F +V+ D VK+W R
Sbjct: 379 HEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
Score = 210 (79.0 bits), Expect = 6.3e-14, P = 6.3e-14
Identities = 41/161 (25%), Positives = 75/161 (46%)
Query: 487 KAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSP 546
K ++ H + + P S++ + S+D T VW T +GH + + F
Sbjct: 101 KYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDH 160
Query: 547 VDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWT 606
+++ + S D TIK+W C++T GH +V + + G IVS D +K+W
Sbjct: 161 SGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWE 220
Query: 607 VRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLW 647
V+TG C+ T+ H + + + + + A+ +D V +W
Sbjct: 221 VQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVW 261
Score = 202 (76.2 bits), Expect = 4.9e-13, P = 4.9e-13
Identities = 44/138 (31%), Positives = 65/138 (47%)
Query: 514 QDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKT 573
Q R W +P GH+ + V F PV V+++AS D TIK+W G +T
Sbjct: 87 QKRDPKEW-IPRPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERT 145
Query: 574 FEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTE 633
+GHT SV SF G + SC AD +KLW + ECI T H+ + ++A+ +
Sbjct: 146 LKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGD 205
Query: 634 MFATGGSDALVNLWHDST 651
+ D + +W T
Sbjct: 206 HIVSASRDKTIKMWEVQT 223
Score = 170 (64.9 bits), Expect = 1.9e-11, Sum P(2) = 1.9e-11
Identities = 34/105 (32%), Positives = 53/105 (50%)
Query: 114 GGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVW 173
G L + D+ + +WDV G C GH V +LFH + + S +DD T+RVW
Sbjct: 308 GPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFH--SGGKFILSCADDKTLRVW 365
Query: 174 DLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLR 218
D K+C+ TL+ H VTS+ +++ D+ V +W+ R
Sbjct: 366 DYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
Score = 155 (59.6 bits), Expect = 8.0e-08, P = 8.0e-08
Identities = 38/133 (28%), Positives = 62/133 (46%)
Query: 42 INIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGH 101
+ + + S S+I + + T + P LL S + I++WD+ST CL + GH
Sbjct: 279 VECISWAPESSYSSISEATGSETKKSGKPGPFLL-SGSRDKTIKMWDVSTGMCLMTLVGH 337
Query: 102 DGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLL 161
D G+ H G + + D+ + VWD C H+ V+S+ FH +
Sbjct: 338 DNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAP--YV 395
Query: 162 FSGSDDATVRVWD 174
+GS D TV+VW+
Sbjct: 396 VTGSVDQTVKVWE 408
Score = 134 (52.2 bits), Expect = 2.0e-13, Sum P(2) = 2.0e-13
Identities = 32/140 (22%), Positives = 66/140 (47%)
Query: 31 GSFIA-CACGESINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWDL 89
G +A C+ +I + D T+ G ++++A+ P+ + S+ + I++W++
Sbjct: 162 GKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEV 221
Query: 90 STLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSS 149
T C++++ GH + + G L+A+ D+ V VW V C + H+ VV
Sbjct: 222 QTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVEC 281
Query: 150 ILFHPDTDKSLLFSGSDDAT 169
I + P++ S + + T
Sbjct: 282 ISWAPESSYSSISEATGSET 301
Score = 121 (47.7 bits), Expect = 2.0e-13, Sum P(2) = 2.0e-13
Identities = 23/70 (32%), Positives = 38/70 (54%)
Query: 161 LFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDY 220
L SGS D T+++WD+ C+ TL H + V + S G ++S DK + +WD ++
Sbjct: 311 LLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNK 370
Query: 221 SCKLTVPTYE 230
C T+ +E
Sbjct: 371 RCMKTLNAHE 380
Score = 65 (27.9 bits), Expect = 1.2e-19, Sum P(2) = 1.2e-19
Identities = 22/80 (27%), Positives = 38/80 (47%)
Query: 200 GSTLISAGRDKVVNLWDLRDYSCKLTVPTYE-MVEAVCAIPPGSAFDSFLSSYNQQTIK- 257
G L+S RDK + +WD+ C +T+ ++ V V G F LS + +T++
Sbjct: 308 GPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVL-FHSGGKF--ILSCADDKTLRV 364
Query: 258 ---KKRRSLEI-----HFIT 269
K +R ++ HF+T
Sbjct: 365 WDYKNKRCMKTLNAHEHFVT 384
Score = 63 (27.2 bits), Expect = 1.9e-11, Sum P(2) = 1.9e-11
Identities = 15/79 (18%), Positives = 36/79 (45%)
Query: 25 LVVSSDGSFIACACGE-SINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSRE 83
+ + +G I A + +I + ++ T G + + + + D L+ S + +
Sbjct: 198 VAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQT 257
Query: 84 IRVWDLSTLKCLRSWKGHD 102
+RVW ++T +C + H+
Sbjct: 258 VRVWVVATKECKAELREHE 276
Score = 37 (18.1 bits), Expect = 7.6e-17, Sum P(2) = 7.6e-17
Identities = 7/23 (30%), Positives = 10/23 (43%)
Query: 629 GKKTEMFATGGSDALVNLWHDST 651
GK +G D + +W ST
Sbjct: 305 GKPGPFLLSGSRDKTIKMWDVST 327
>UNIPROTKB|P43034 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9606 "Homo sapiens" [GO:0016042 "lipid
catabolic process" evidence=IEA] [GO:0001667 "ameboidal cell
migration" evidence=IEA] [GO:0001961 "positive regulation of
cytokine-mediated signaling pathway" evidence=IEA] [GO:0005871
"kinesin complex" evidence=IEA] [GO:0007097 "nuclear migration"
evidence=IEA] [GO:0009306 "protein secretion" evidence=IEA]
[GO:0010977 "negative regulation of neuron projection development"
evidence=IEA] [GO:0017145 "stem cell division" evidence=IEA]
[GO:0021895 "cerebral cortex neuron differentiation" evidence=IEA]
[GO:0030426 "growth cone" evidence=IEA] [GO:0031982 "vesicle"
evidence=IEA] [GO:0032403 "protein complex binding" evidence=IEA]
[GO:0033267 "axon part" evidence=IEA] [GO:0036035 "osteoclast
development" evidence=IEA] [GO:0043025 "neuronal cell body"
evidence=IEA] [GO:0045505 "dynein intermediate chain binding"
evidence=IEA] [GO:0045773 "positive regulation of axon extension"
evidence=IEA] [GO:0045931 "positive regulation of mitotic cell
cycle" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0051081 "nuclear envelope disassembly"
evidence=IEA] [GO:0051660 "establishment of centrosome
localization" evidence=IEA] [GO:0031965 "nuclear membrane"
evidence=IEA] [GO:0001764 "neuron migration" evidence=ISS;IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0000132
"establishment of mitotic spindle orientation" evidence=IMP]
[GO:0000776 "kinetochore" evidence=IDA] [GO:0005875 "microtubule
associated complex" evidence=IDA] [GO:0045502 "dynein binding"
evidence=IDA] [GO:0007017 "microtubule-based process" evidence=IDA]
[GO:0005635 "nuclear envelope" evidence=IDA] [GO:0005938 "cell
cortex" evidence=IDA] [GO:0000235 "astral microtubule"
evidence=IDA] [GO:0031023 "microtubule organizing center
organization" evidence=IMP] [GO:0005813 "centrosome"
evidence=ISS;IDA] [GO:0000086 "G2/M transition of mitotic cell
cycle" evidence=TAS] [GO:0000087 "M phase of mitotic cell cycle"
evidence=TAS] [GO:0000236 "mitotic prometaphase" evidence=TAS]
[GO:0000278 "mitotic cell cycle" evidence=TAS] [GO:0005829
"cytosol" evidence=ISS;TAS] [GO:0048854 "brain morphogenesis"
evidence=IMP] [GO:0008201 "heparin binding" evidence=ISS]
[GO:0008344 "adult locomotory behavior" evidence=IMP] [GO:0021540
"corpus callosum morphogenesis" evidence=IMP] [GO:0021987 "cerebral
cortex development" evidence=IMP] [GO:0050885 "neuromuscular
process controlling balance" evidence=IMP] [GO:0000226 "microtubule
cytoskeleton organization" evidence=ISS] [GO:0007268 "synaptic
transmission" evidence=ISS] [GO:0007405 "neuroblast proliferation"
evidence=ISS] [GO:0008017 "microtubule binding" evidence=ISS]
[GO:0008090 "retrograde axon cargo transport" evidence=ISS]
[GO:0019226 "transmission of nerve impulse" evidence=ISS]
[GO:0030036 "actin cytoskeleton organization" evidence=ISS]
[GO:0032319 "regulation of Rho GTPase activity" evidence=ISS]
[GO:0047496 "vesicle transport along microtubule" evidence=ISS]
[GO:0043274 "phospholipase binding" evidence=ISS] [GO:0046469
"platelet activating factor metabolic process" evidence=ISS]
[GO:0034452 "dynactin binding" evidence=ISS] [GO:0001675 "acrosome
assembly" evidence=ISS] [GO:0007611 "learning or memory"
evidence=ISS] [GO:0021766 "hippocampus development" evidence=ISS]
[GO:0021819 "layer formation in cerebral cortex" evidence=ISS]
[GO:0031252 "cell leading edge" evidence=ISS] [GO:0031512 "motile
primary cilium" evidence=ISS] [GO:0031513 "nonmotile primary
cilium" evidence=ISS] [GO:0042803 "protein homodimerization
activity" evidence=ISS] [GO:0048471 "perinuclear region of
cytoplasm" evidence=ISS] [GO:0051219 "phosphoprotein binding"
evidence=ISS] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005829
GO:GO:0005938 GO:GO:0000132 GO:GO:0005635 GO:GO:0005813
GO:GO:0048471 GO:GO:0021766 GO:GO:0001764 GO:GO:0005875
EMBL:CH471108 Orphanet:217385 Pathway_Interaction_DB:lis1pathway
Reactome:REACT_115566 GO:GO:0033267 GO:GO:0005871 GO:GO:0000086
GO:GO:0042803 GO:GO:0031252 Reactome:REACT_21300 GO:GO:0000776
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036 GO:GO:0045931
GO:GO:0007268 GO:GO:0043025 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885
GO:GO:0008201 GO:GO:0030426 GO:GO:0007611 GO:GO:0007405
GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513 GO:GO:0045773
GO:GO:0001675 GO:GO:0008017 Pathway_Interaction_DB:reelinpathway
GO:GO:0000235 GO:GO:0032319 GO:GO:0031023 GO:GO:0007097
GO:GO:0051219 GO:GO:0000236 GO:GO:0048854 GO:GO:0034452
GO:GO:0021540 GO:GO:0045502 GO:GO:0021819 GO:GO:0047496
GO:GO:0010977 GO:GO:0017145 GO:GO:0031512 GO:GO:0021895
Orphanet:531 HOGENOM:HOG000184015 HOVERGEN:HBG006271 KO:K01062
OMA:WVRGLAF OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 GO:GO:0043274
GO:GO:0046469 GO:GO:0051081 EMBL:L13385 EMBL:L13386 EMBL:L13387
EMBL:U72342 EMBL:U72334 EMBL:U72335 EMBL:U72336 EMBL:U72337
EMBL:U72338 EMBL:U72339 EMBL:U72340 EMBL:U72341 EMBL:AF208837
EMBL:AF208838 EMBL:AF400434 EMBL:AK313078 EMBL:BX538346
EMBL:BC064638 IPI:IPI00218728 IPI:IPI00760905 PIR:S36113
RefSeq:NP_000421.1 UniGene:Hs.77318 ProteinModelPortal:P43034
SMR:P43034 DIP:DIP-35691N IntAct:P43034 MINT:MINT-5004233
STRING:P43034 PhosphoSite:P43034 DMDM:1170794 PaxDb:P43034
PeptideAtlas:P43034 PRIDE:P43034 Ensembl:ENST00000397195
GeneID:5048 KEGG:hsa:5048 UCSC:uc002fuw.4 GeneCards:GC17P002496
HGNC:HGNC:8574 HPA:CAB004489 HPA:HPA020036 MIM:247200 MIM:601545
MIM:607432 neXtProt:NX_P43034 Orphanet:95232 PharmGKB:PA32905
InParanoid:P43034 PhylomeDB:P43034 ChiTaRS:PAFAH1B1 GenomeRNAi:5048
NextBio:19452 ArrayExpress:P43034 Bgee:P43034 CleanEx:HS_PAFAH1B1
Genevestigator:P43034 GermOnline:ENSG00000007168 GO:GO:0051660
Uniprot:P43034
Length = 410
Score = 254 (94.5 bits), Expect = 6.1e-19, P = 6.1e-19
Identities = 64/236 (27%), Positives = 104/236 (44%)
Query: 53 KSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHP 112
K + G +T + P ++ S+ I+VWD T R+ KGH ++
Sbjct: 101 KYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDH 160
Query: 113 SGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRV 172
SG LLA+ AD + +WD G C GH VSS+ P+ D + S S D T+++
Sbjct: 161 SGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDH--IVSASRDKTIKM 218
Query: 173 WDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYEMV 232
W++ CV T H V + DG+ + S D+ V +W + CK + +E V
Sbjct: 219 WEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHV 278
Query: 233 EAVCAIPPGSAFDSFLSSYNQQTIKKKRRSLEIHFITVGERG-IVRMWNADSA-CL 286
+ P S++ S + +T K + F+ G R ++MW+ + CL
Sbjct: 279 VECISWAPESSYSSISEATGSETKKSGKPG---PFLLSGSRDKTIKMWDVSTGMCL 331
Score = 240 (89.5 bits), Expect = 7.6e-17, Sum P(2) = 7.6e-17
Identities = 65/205 (31%), Positives = 92/205 (44%)
Query: 438 TGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDI 497
+GH V V F + +VS S D TIKVW ++ + D E+ LK H +
Sbjct: 105 SGHRSPVTRVIFHPVF-SVMVSASEDATIKVWDYE--TGDFER--TLKG------HTDSV 153
Query: 498 NSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGD 557
++ + L+ + S D T +W + T GH + SV P +++AS D
Sbjct: 154 QDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRD 213
Query: 558 KTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYD 617
KTIK+W + G C+KTF GH V G I SC D V++W V T EC A
Sbjct: 214 KTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELR 273
Query: 618 KHEDKI----WALAVGKKTEMFATG 638
+HE + WA + ATG
Sbjct: 274 EHEHVVECISWAPESSYSSISEATG 298
Score = 239 (89.2 bits), Expect = 1.2e-19, Sum P(2) = 1.2e-19
Identities = 46/147 (31%), Positives = 79/147 (53%)
Query: 41 SINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKG 100
+I + D + T++G +D++ ++ KLL S I++WD +C+R+ G
Sbjct: 131 TIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHG 190
Query: 101 HDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSL 160
HD +A P+G + +A D+ + +W+V G+C F GH+ V + P+ D +L
Sbjct: 191 HDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMV--RPNQDGTL 248
Query: 161 LFSGSDDATVRVWDLLAKKCVATLDKH 187
+ S S+D TVRVW + K+C A L +H
Sbjct: 249 IASCSNDQTVRVWVVATKECKAELREH 275
Score = 228 (85.3 bits), Expect = 5.8e-16, P = 5.8e-16
Identities = 73/282 (25%), Positives = 121/282 (42%)
Query: 378 VQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVG 437
++V+D + L GH++ V D SGK+L + S D +++LWD + C+
Sbjct: 132 IKVWDYETGDFERTLKGHTDSVQ--DISFDHSGKLL-ASCSADMTIKLWDFQGFECIRTM 188
Query: 438 TGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVW---------SFDGLSDDAEQPMNLKAKA 488
GH V +VA + +VS S D TIK+W +F G + +
Sbjct: 189 HGHDHNVSSVAIMPN-GDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGT 247
Query: 489 VVAAHGKD--INSLAVAPNDSLVCTGSQDRTA-CVWRLPDLVSVVTFRGHKRGIWSVEFS 545
++A+ D + VA + + C+ P+ S + G + +
Sbjct: 248 LIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPE--SSYSSISEATGSETKKSG 305
Query: 546 PVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLW 605
+++ S DKTIK+W +S G CL T GH + V F + G I+SC D +++W
Sbjct: 306 KPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVW 365
Query: 606 TVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLW 647
+ C+ T + HE + +L K TG D V +W
Sbjct: 366 DYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 407
Score = 218 (81.8 bits), Expect = 7.9e-15, P = 7.9e-15
Identities = 61/272 (22%), Positives = 119/272 (43%)
Query: 347 KRLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCA 406
+ L G+ + + D+ F + LA + ++++D C + GH V + A
Sbjct: 144 RTLKGHTDSVQDISF-DHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNV---SSVA 199
Query: 407 LSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTI 466
+ IV+ S+D ++++W+ ++ CV TGH V V ++ + S S+D T+
Sbjct: 200 IMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQD-GTLIASCSNDQTV 258
Query: 467 KVWSFDGLSDDAE-QPMNLKAKAVVAAHGKDINSLAVAPNDS---------LVCTGSQDR 516
+VW AE + + + A +S++ A + +GS+D+
Sbjct: 259 RVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDK 318
Query: 517 TACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEG 576
T +W + + ++T GH + V F + +++ + DKT+++W + C+KT
Sbjct: 319 TIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNA 378
Query: 577 HTSSVLRASFLTRGAQIVSCGADGLVKLWTVR 608
H V F +V+ D VK+W R
Sbjct: 379 HEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
Score = 210 (79.0 bits), Expect = 6.3e-14, P = 6.3e-14
Identities = 41/161 (25%), Positives = 75/161 (46%)
Query: 487 KAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSP 546
K ++ H + + P S++ + S+D T VW T +GH + + F
Sbjct: 101 KYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDH 160
Query: 547 VDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWT 606
+++ + S D TIK+W C++T GH +V + + G IVS D +K+W
Sbjct: 161 SGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWE 220
Query: 607 VRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLW 647
V+TG C+ T+ H + + + + + A+ +D V +W
Sbjct: 221 VQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVW 261
Score = 202 (76.2 bits), Expect = 4.9e-13, P = 4.9e-13
Identities = 44/138 (31%), Positives = 65/138 (47%)
Query: 514 QDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKT 573
Q R W +P GH+ + V F PV V+++AS D TIK+W G +T
Sbjct: 87 QKRDPKEW-IPRPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERT 145
Query: 574 FEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTE 633
+GHT SV SF G + SC AD +KLW + ECI T H+ + ++A+ +
Sbjct: 146 LKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGD 205
Query: 634 MFATGGSDALVNLWHDST 651
+ D + +W T
Sbjct: 206 HIVSASRDKTIKMWEVQT 223
Score = 170 (64.9 bits), Expect = 1.9e-11, Sum P(2) = 1.9e-11
Identities = 34/105 (32%), Positives = 53/105 (50%)
Query: 114 GGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVW 173
G L + D+ + +WDV G C GH V +LFH + + S +DD T+RVW
Sbjct: 308 GPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFH--SGGKFILSCADDKTLRVW 365
Query: 174 DLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLR 218
D K+C+ TL+ H VTS+ +++ D+ V +W+ R
Sbjct: 366 DYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
Score = 155 (59.6 bits), Expect = 8.0e-08, P = 8.0e-08
Identities = 38/133 (28%), Positives = 62/133 (46%)
Query: 42 INIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGH 101
+ + + S S+I + + T + P LL S + I++WD+ST CL + GH
Sbjct: 279 VECISWAPESSYSSISEATGSETKKSGKPGPFLL-SGSRDKTIKMWDVSTGMCLMTLVGH 337
Query: 102 DGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLL 161
D G+ H G + + D+ + VWD C H+ V+S+ FH +
Sbjct: 338 DNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAP--YV 395
Query: 162 FSGSDDATVRVWD 174
+GS D TV+VW+
Sbjct: 396 VTGSVDQTVKVWE 408
Score = 134 (52.2 bits), Expect = 2.0e-13, Sum P(2) = 2.0e-13
Identities = 32/140 (22%), Positives = 66/140 (47%)
Query: 31 GSFIA-CACGESINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWDL 89
G +A C+ +I + D T+ G ++++A+ P+ + S+ + I++W++
Sbjct: 162 GKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEV 221
Query: 90 STLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSS 149
T C++++ GH + + G L+A+ D+ V VW V C + H+ VV
Sbjct: 222 QTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVEC 281
Query: 150 ILFHPDTDKSLLFSGSDDAT 169
I + P++ S + + T
Sbjct: 282 ISWAPESSYSSISEATGSET 301
Score = 121 (47.7 bits), Expect = 2.0e-13, Sum P(2) = 2.0e-13
Identities = 23/70 (32%), Positives = 38/70 (54%)
Query: 161 LFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDY 220
L SGS D T+++WD+ C+ TL H + V + S G ++S DK + +WD ++
Sbjct: 311 LLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNK 370
Query: 221 SCKLTVPTYE 230
C T+ +E
Sbjct: 371 RCMKTLNAHE 380
Score = 65 (27.9 bits), Expect = 1.2e-19, Sum P(2) = 1.2e-19
Identities = 22/80 (27%), Positives = 38/80 (47%)
Query: 200 GSTLISAGRDKVVNLWDLRDYSCKLTVPTYE-MVEAVCAIPPGSAFDSFLSSYNQQTIK- 257
G L+S RDK + +WD+ C +T+ ++ V V G F LS + +T++
Sbjct: 308 GPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVL-FHSGGKF--ILSCADDKTLRV 364
Query: 258 ---KKRRSLEI-----HFIT 269
K +R ++ HF+T
Sbjct: 365 WDYKNKRCMKTLNAHEHFVT 384
Score = 63 (27.2 bits), Expect = 1.9e-11, Sum P(2) = 1.9e-11
Identities = 15/79 (18%), Positives = 36/79 (45%)
Query: 25 LVVSSDGSFIACACGE-SINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSRE 83
+ + +G I A + +I + ++ T G + + + + D L+ S + +
Sbjct: 198 VAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQT 257
Query: 84 IRVWDLSTLKCLRSWKGHD 102
+RVW ++T +C + H+
Sbjct: 258 VRVWVVATKECKAELREHE 276
Score = 37 (18.1 bits), Expect = 7.6e-17, Sum P(2) = 7.6e-17
Identities = 7/23 (30%), Positives = 10/23 (43%)
Query: 629 GKKTEMFATGGSDALVNLWHDST 651
GK +G D + +W ST
Sbjct: 305 GKPGPFLLSGSRDKTIKMWDVST 327
>UNIPROTKB|F2Z521 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9823 "Sus scrofa" [GO:0051219
"phosphoprotein binding" evidence=IEA] [GO:0051081 "nuclear
envelope disassembly" evidence=IEA] [GO:0050885 "neuromuscular
process controlling balance" evidence=IEA] [GO:0048854 "brain
morphogenesis" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0047496 "vesicle transport along
microtubule" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0045502 "dynein binding" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0036035 "osteoclast development" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0031512
"motile primary cilium" evidence=IEA] [GO:0031252 "cell leading
edge" evidence=IEA] [GO:0031023 "microtubule organizing center
organization" evidence=IEA] [GO:0030036 "actin cytoskeleton
organization" evidence=IEA] [GO:0021819 "layer formation in
cerebral cortex" evidence=IEA] [GO:0021766 "hippocampus
development" evidence=IEA] [GO:0021540 "corpus callosum
morphogenesis" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0008344 "adult locomotory behavior" evidence=IEA]
[GO:0008090 "retrograde axon cargo transport" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] [GO:0007611
"learning or memory" evidence=IEA] [GO:0007405 "neuroblast
proliferation" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IEA] [GO:0005938 "cell cortex" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0001961 "positive regulation of cytokine-mediated signaling
pathway" evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
[GO:0001675 "acrosome assembly" evidence=IEA] [GO:0001667
"ameboidal cell migration" evidence=IEA] [GO:0000776 "kinetochore"
evidence=IEA] [GO:0000235 "astral microtubule" evidence=IEA]
[GO:0000132 "establishment of mitotic spindle orientation"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005938 GO:GO:0000132 GO:GO:0005635 GO:GO:0005813
GO:GO:0048471 GO:GO:0021766 GO:GO:0001764 GO:GO:0005875
GO:GO:0031252 GO:GO:0000776 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030036 GO:GO:0007268 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885 GO:GO:0007611
GO:GO:0007405 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0001675 GO:GO:0000235 GO:GO:0032319 GO:GO:0031023
GO:GO:0048854 GO:GO:0021540 GO:GO:0021819 GO:GO:0047496
GO:GO:0031512 GeneTree:ENSGT00700000104282 OMA:WVRGLAF
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
GO:GO:0051081 EMBL:CU469125 ProteinModelPortal:F2Z521 SMR:F2Z521
PRIDE:F2Z521 Ensembl:ENSSSCT00000019411 Uniprot:F2Z521
Length = 410
Score = 254 (94.5 bits), Expect = 6.1e-19, P = 6.1e-19
Identities = 64/236 (27%), Positives = 104/236 (44%)
Query: 53 KSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHP 112
K + G +T + P ++ S+ I+VWD T R+ KGH ++
Sbjct: 101 KYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDH 160
Query: 113 SGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRV 172
SG LLA+ AD + +WD G C GH VSS+ P+ D + S S D T+++
Sbjct: 161 SGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDH--IVSASRDKTIKM 218
Query: 173 WDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYEMV 232
W++ CV T H V + DG+ + S D+ V +W + CK + +E V
Sbjct: 219 WEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHV 278
Query: 233 EAVCAIPPGSAFDSFLSSYNQQTIKKKRRSLEIHFITVGERG-IVRMWNADSA-CL 286
+ P S++ S + +T K + F+ G R ++MW+ + CL
Sbjct: 279 VECISWAPESSYSSISEATGSETKKSGKPG---PFLLSGSRDKTIKMWDVSTGMCL 331
Score = 240 (89.5 bits), Expect = 7.6e-17, Sum P(2) = 7.6e-17
Identities = 65/205 (31%), Positives = 92/205 (44%)
Query: 438 TGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDI 497
+GH V V F + +VS S D TIKVW ++ + D E+ LK H +
Sbjct: 105 SGHRSPVTRVIFHPVF-SVMVSASEDATIKVWDYE--TGDFER--TLKG------HTDSV 153
Query: 498 NSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGD 557
++ + L+ + S D T +W + T GH + SV P +++AS D
Sbjct: 154 QDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRD 213
Query: 558 KTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYD 617
KTIK+W + G C+KTF GH V G I SC D V++W V T EC A
Sbjct: 214 KTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELR 273
Query: 618 KHEDKI----WALAVGKKTEMFATG 638
+HE + WA + ATG
Sbjct: 274 EHEHVVECISWAPESSYSSISEATG 298
Score = 239 (89.2 bits), Expect = 1.2e-19, Sum P(2) = 1.2e-19
Identities = 46/147 (31%), Positives = 79/147 (53%)
Query: 41 SINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKG 100
+I + D + T++G +D++ ++ KLL S I++WD +C+R+ G
Sbjct: 131 TIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHG 190
Query: 101 HDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSL 160
HD +A P+G + +A D+ + +W+V G+C F GH+ V + P+ D +L
Sbjct: 191 HDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMV--RPNQDGTL 248
Query: 161 LFSGSDDATVRVWDLLAKKCVATLDKH 187
+ S S+D TVRVW + K+C A L +H
Sbjct: 249 IASCSNDQTVRVWVVATKECKAELREH 275
Score = 228 (85.3 bits), Expect = 5.8e-16, P = 5.8e-16
Identities = 73/282 (25%), Positives = 121/282 (42%)
Query: 378 VQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVG 437
++V+D + L GH++ V D SGK+L + S D +++LWD + C+
Sbjct: 132 IKVWDYETGDFERTLKGHTDSVQ--DISFDHSGKLL-ASCSADMTIKLWDFQGFECIRTM 188
Query: 438 TGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVW---------SFDGLSDDAEQPMNLKAKA 488
GH V +VA + +VS S D TIK+W +F G + +
Sbjct: 189 HGHDHNVSSVAIMPN-GDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGT 247
Query: 489 VVAAHGKD--INSLAVAPNDSLVCTGSQDRTA-CVWRLPDLVSVVTFRGHKRGIWSVEFS 545
++A+ D + VA + + C+ P+ S + G + +
Sbjct: 248 LIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPE--SSYSSISEATGSETKKSG 305
Query: 546 PVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLW 605
+++ S DKTIK+W +S G CL T GH + V F + G I+SC D +++W
Sbjct: 306 KPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVW 365
Query: 606 TVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLW 647
+ C+ T + HE + +L K TG D V +W
Sbjct: 366 DYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 407
Score = 218 (81.8 bits), Expect = 7.9e-15, P = 7.9e-15
Identities = 61/272 (22%), Positives = 119/272 (43%)
Query: 347 KRLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCA 406
+ L G+ + + D+ F + LA + ++++D C + GH V + A
Sbjct: 144 RTLKGHTDSVQDISF-DHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNV---SSVA 199
Query: 407 LSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTI 466
+ IV+ S+D ++++W+ ++ CV TGH V V ++ + S S+D T+
Sbjct: 200 IMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQD-GTLIASCSNDQTV 258
Query: 467 KVWSFDGLSDDAE-QPMNLKAKAVVAAHGKDINSLAVAPNDS---------LVCTGSQDR 516
+VW AE + + + A +S++ A + +GS+D+
Sbjct: 259 RVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDK 318
Query: 517 TACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEG 576
T +W + + ++T GH + V F + +++ + DKT+++W + C+KT
Sbjct: 319 TIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNA 378
Query: 577 HTSSVLRASFLTRGAQIVSCGADGLVKLWTVR 608
H V F +V+ D VK+W R
Sbjct: 379 HEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
Score = 210 (79.0 bits), Expect = 6.3e-14, P = 6.3e-14
Identities = 41/161 (25%), Positives = 75/161 (46%)
Query: 487 KAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSP 546
K ++ H + + P S++ + S+D T VW T +GH + + F
Sbjct: 101 KYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDH 160
Query: 547 VDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWT 606
+++ + S D TIK+W C++T GH +V + + G IVS D +K+W
Sbjct: 161 SGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWE 220
Query: 607 VRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLW 647
V+TG C+ T+ H + + + + + A+ +D V +W
Sbjct: 221 VQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVW 261
Score = 202 (76.2 bits), Expect = 4.9e-13, P = 4.9e-13
Identities = 44/138 (31%), Positives = 65/138 (47%)
Query: 514 QDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKT 573
Q R W +P GH+ + V F PV V+++AS D TIK+W G +T
Sbjct: 87 QKRDPKEW-IPRPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERT 145
Query: 574 FEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTE 633
+GHT SV SF G + SC AD +KLW + ECI T H+ + ++A+ +
Sbjct: 146 LKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGD 205
Query: 634 MFATGGSDALVNLWHDST 651
+ D + +W T
Sbjct: 206 HIVSASRDKTIKMWEVQT 223
Score = 170 (64.9 bits), Expect = 1.9e-11, Sum P(2) = 1.9e-11
Identities = 34/105 (32%), Positives = 53/105 (50%)
Query: 114 GGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVW 173
G L + D+ + +WDV G C GH V +LFH + + S +DD T+RVW
Sbjct: 308 GPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFH--SGGKFILSCADDKTLRVW 365
Query: 174 DLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLR 218
D K+C+ TL+ H VTS+ +++ D+ V +W+ R
Sbjct: 366 DYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
Score = 155 (59.6 bits), Expect = 8.0e-08, P = 8.0e-08
Identities = 38/133 (28%), Positives = 62/133 (46%)
Query: 42 INIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGH 101
+ + + S S+I + + T + P LL S + I++WD+ST CL + GH
Sbjct: 279 VECISWAPESSYSSISEATGSETKKSGKPGPFLL-SGSRDKTIKMWDVSTGMCLMTLVGH 337
Query: 102 DGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLL 161
D G+ H G + + D+ + VWD C H+ V+S+ FH +
Sbjct: 338 DNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAP--YV 395
Query: 162 FSGSDDATVRVWD 174
+GS D TV+VW+
Sbjct: 396 VTGSVDQTVKVWE 408
Score = 134 (52.2 bits), Expect = 2.0e-13, Sum P(2) = 2.0e-13
Identities = 32/140 (22%), Positives = 66/140 (47%)
Query: 31 GSFIA-CACGESINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWDL 89
G +A C+ +I + D T+ G ++++A+ P+ + S+ + I++W++
Sbjct: 162 GKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEV 221
Query: 90 STLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSS 149
T C++++ GH + + G L+A+ D+ V VW V C + H+ VV
Sbjct: 222 QTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVEC 281
Query: 150 ILFHPDTDKSLLFSGSDDAT 169
I + P++ S + + T
Sbjct: 282 ISWAPESSYSSISEATGSET 301
Score = 121 (47.7 bits), Expect = 2.0e-13, Sum P(2) = 2.0e-13
Identities = 23/70 (32%), Positives = 38/70 (54%)
Query: 161 LFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDY 220
L SGS D T+++WD+ C+ TL H + V + S G ++S DK + +WD ++
Sbjct: 311 LLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNK 370
Query: 221 SCKLTVPTYE 230
C T+ +E
Sbjct: 371 RCMKTLNAHE 380
Score = 65 (27.9 bits), Expect = 1.2e-19, Sum P(2) = 1.2e-19
Identities = 22/80 (27%), Positives = 38/80 (47%)
Query: 200 GSTLISAGRDKVVNLWDLRDYSCKLTVPTYE-MVEAVCAIPPGSAFDSFLSSYNQQTIK- 257
G L+S RDK + +WD+ C +T+ ++ V V G F LS + +T++
Sbjct: 308 GPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVL-FHSGGKF--ILSCADDKTLRV 364
Query: 258 ---KKRRSLEI-----HFIT 269
K +R ++ HF+T
Sbjct: 365 WDYKNKRCMKTLNAHEHFVT 384
Score = 63 (27.2 bits), Expect = 1.9e-11, Sum P(2) = 1.9e-11
Identities = 15/79 (18%), Positives = 36/79 (45%)
Query: 25 LVVSSDGSFIACACGE-SINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSRE 83
+ + +G I A + +I + ++ T G + + + + D L+ S + +
Sbjct: 198 VAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQT 257
Query: 84 IRVWDLSTLKCLRSWKGHD 102
+RVW ++T +C + H+
Sbjct: 258 VRVWVVATKECKAELREHE 276
Score = 37 (18.1 bits), Expect = 7.6e-17, Sum P(2) = 7.6e-17
Identities = 7/23 (30%), Positives = 10/23 (43%)
Query: 629 GKKTEMFATGGSDALVNLWHDST 651
GK +G D + +W ST
Sbjct: 305 GKPGPFLLSGSRDKTIKMWDVST 327
>MGI|MGI:109520 [details] [associations]
symbol:Pafah1b1 "platelet-activating factor acetylhydrolase,
isoform 1b, subunit 1" species:10090 "Mus musculus" [GO:0000132
"establishment of mitotic spindle orientation" evidence=ISO]
[GO:0000226 "microtubule cytoskeleton organization"
evidence=IGI;IMP] [GO:0000235 "astral microtubule" evidence=ISO]
[GO:0000776 "kinetochore" evidence=ISO] [GO:0001667 "ameboidal cell
migration" evidence=IMP] [GO:0001675 "acrosome assembly"
evidence=IMP] [GO:0001764 "neuron migration" evidence=ISO;IGI;IMP]
[GO:0001961 "positive regulation of cytokine-mediated signaling
pathway" evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005635 "nuclear envelope"
evidence=ISO;ISS] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005813
"centrosome" evidence=ISO;IDA] [GO:0005829 "cytosol" evidence=ISO]
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005871 "kinesin
complex" evidence=ISO] [GO:0005874 "microtubule" evidence=IEA]
[GO:0005875 "microtubule associated complex" evidence=ISO;IDA]
[GO:0005938 "cell cortex" evidence=ISO] [GO:0006629 "lipid
metabolic process" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0007017 "microtubule-based process" evidence=ISO]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0007097 "nuclear migration" evidence=ISO]
[GO:0007268 "synaptic transmission" evidence=IMP] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007399
"nervous system development" evidence=IEA] [GO:0007405 "neuroblast
proliferation" evidence=IMP] [GO:0007611 "learning or memory"
evidence=IMP] [GO:0008017 "microtubule binding" evidence=ISO;IDA]
[GO:0008090 "retrograde axon cargo transport" evidence=IDA]
[GO:0008344 "adult locomotory behavior" evidence=ISO;IMP]
[GO:0009306 "protein secretion" evidence=IMP] [GO:0010977 "negative
regulation of neuron projection development" evidence=ISO]
[GO:0015630 "microtubule cytoskeleton" evidence=IDA] [GO:0016020
"membrane" evidence=IEA] [GO:0016042 "lipid catabolic process"
evidence=IEA] [GO:0016477 "cell migration" evidence=IMP]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017145 "stem
cell division" evidence=ISO] [GO:0019226 "transmission of nerve
impulse" evidence=IMP] [GO:0021540 "corpus callosum morphogenesis"
evidence=ISO] [GO:0021766 "hippocampus development"
evidence=IGI;IMP] [GO:0021819 "layer formation in cerebral cortex"
evidence=IGI] [GO:0021895 "cerebral cortex neuron differentiation"
evidence=ISO] [GO:0021987 "cerebral cortex development"
evidence=ISO;IGI;IMP] [GO:0030036 "actin cytoskeleton organization"
evidence=IMP] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0030426 "growth cone" evidence=ISO] [GO:0031023 "microtubule
organizing center organization" evidence=ISO] [GO:0031252 "cell
leading edge" evidence=IDA] [GO:0031512 "motile primary cilium"
evidence=IDA] [GO:0031513 "nonmotile primary cilium" evidence=IDA]
[GO:0031982 "vesicle" evidence=ISO] [GO:0032319 "regulation of Rho
GTPase activity" evidence=IMP] [GO:0032403 "protein complex
binding" evidence=ISO] [GO:0033267 "axon part" evidence=ISO]
[GO:0036035 "osteoclast development" evidence=IMP] [GO:0042803
"protein homodimerization activity" evidence=IPI] [GO:0043005
"neuron projection" evidence=ISO] [GO:0043025 "neuronal cell body"
evidence=ISO] [GO:0045502 "dynein binding" evidence=ISO]
[GO:0045505 "dynein intermediate chain binding" evidence=ISO]
[GO:0045773 "positive regulation of axon extension" evidence=ISO]
[GO:0045931 "positive regulation of mitotic cell cycle"
evidence=ISO] [GO:0046329 "negative regulation of JNK cascade"
evidence=IGI] [GO:0047496 "vesicle transport along microtubule"
evidence=IGI] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IDA] [GO:0048854 "brain morphogenesis" evidence=ISO]
[GO:0050885 "neuromuscular process controlling balance"
evidence=ISO;IMP] [GO:0051081 "nuclear envelope disassembly"
evidence=IMP] [GO:0051219 "phosphoprotein binding" evidence=IPI]
[GO:0051301 "cell division" evidence=IEA] [GO:0051660
"establishment of centrosome localization" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 MGI:MGI:109520
GO:GO:0005829 GO:GO:0005938 GO:GO:0000132 GO:GO:0005635
GO:GO:0005813 GO:GO:0048471 GO:GO:0021766 GO:GO:0001764
GO:GO:0005875 GO:GO:0033267 GO:GO:0005871 GO:GO:0000226
GO:GO:0000776 GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036
GO:GO:0045931 GO:GO:0007268 GO:GO:0043025 GO:GO:0031965
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344
GO:GO:0050885 GO:GO:0009306 GO:GO:0030426 GO:GO:0007611
GO:GO:0007405 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0045773 GO:GO:0001675 GO:GO:0046329 GO:GO:0008017
GO:GO:0000235 GO:GO:0032319 GO:GO:0031023 GO:GO:0007097
GO:GO:0048854 GO:GO:0021540 GO:GO:0001667 GO:GO:0021819
GO:GO:0047496 GO:GO:0036035 GO:GO:0010977 GO:GO:0017145
GO:GO:0031512 GO:GO:0021895 GO:GO:0001961 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OMA:WVRGLAF OrthoDB:EOG4P5K93
HAMAP:MF_03141 InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 CTD:5048 GO:GO:0051081 ChiTaRS:PAFAH1B1
GO:GO:0051660 EMBL:U95116 EMBL:U95120 EMBL:U95119 EMBL:L25109
EMBL:AY189217 EMBL:AY189218 EMBL:BC014831 EMBL:BC026141
IPI:IPI00227864 IPI:IPI00309207 RefSeq:NP_038653.1
UniGene:Mm.397111 PDB:1UUJ PDB:1VYH PDBsum:1UUJ PDBsum:1VYH
ProteinModelPortal:P63005 SMR:P63005 DIP:DIP-29555N IntAct:P63005
STRING:P63005 PhosphoSite:P63005 REPRODUCTION-2DPAGE:P63005
PaxDb:P63005 PRIDE:P63005 Ensembl:ENSMUST00000021091
Ensembl:ENSMUST00000102520 GeneID:18472 KEGG:mmu:18472
InParanoid:P63005 EvolutionaryTrace:P63005 NextBio:294162
Bgee:P63005 Genevestigator:P63005 GermOnline:ENSMUSG00000020745
Uniprot:P63005
Length = 410
Score = 254 (94.5 bits), Expect = 6.1e-19, P = 6.1e-19
Identities = 64/236 (27%), Positives = 104/236 (44%)
Query: 53 KSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHP 112
K + G +T + P ++ S+ I+VWD T R+ KGH ++
Sbjct: 101 KYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDH 160
Query: 113 SGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRV 172
SG LLA+ AD + +WD G C GH VSS+ P+ D + S S D T+++
Sbjct: 161 SGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDH--IVSASRDKTIKM 218
Query: 173 WDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYEMV 232
W++ CV T H V + DG+ + S D+ V +W + CK + +E V
Sbjct: 219 WEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHV 278
Query: 233 EAVCAIPPGSAFDSFLSSYNQQTIKKKRRSLEIHFITVGERG-IVRMWNADSA-CL 286
+ P S++ S + +T K + F+ G R ++MW+ + CL
Sbjct: 279 VECISWAPESSYSSISEATGSETKKSGKPG---PFLLSGSRDKTIKMWDVSTGMCL 331
Score = 240 (89.5 bits), Expect = 7.6e-17, Sum P(2) = 7.6e-17
Identities = 65/205 (31%), Positives = 92/205 (44%)
Query: 438 TGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDI 497
+GH V V F + +VS S D TIKVW ++ + D E+ LK H +
Sbjct: 105 SGHRSPVTRVIFHPVF-SVMVSASEDATIKVWDYE--TGDFER--TLKG------HTDSV 153
Query: 498 NSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGD 557
++ + L+ + S D T +W + T GH + SV P +++AS D
Sbjct: 154 QDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRD 213
Query: 558 KTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYD 617
KTIK+W + G C+KTF GH V G I SC D V++W V T EC A
Sbjct: 214 KTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELR 273
Query: 618 KHEDKI----WALAVGKKTEMFATG 638
+HE + WA + ATG
Sbjct: 274 EHEHVVECISWAPESSYSSISEATG 298
Score = 239 (89.2 bits), Expect = 1.2e-19, Sum P(2) = 1.2e-19
Identities = 46/147 (31%), Positives = 79/147 (53%)
Query: 41 SINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKG 100
+I + D + T++G +D++ ++ KLL S I++WD +C+R+ G
Sbjct: 131 TIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHG 190
Query: 101 HDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSL 160
HD +A P+G + +A D+ + +W+V G+C F GH+ V + P+ D +L
Sbjct: 191 HDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMV--RPNQDGTL 248
Query: 161 LFSGSDDATVRVWDLLAKKCVATLDKH 187
+ S S+D TVRVW + K+C A L +H
Sbjct: 249 IASCSNDQTVRVWVVATKECKAELREH 275
Score = 228 (85.3 bits), Expect = 5.8e-16, P = 5.8e-16
Identities = 73/282 (25%), Positives = 121/282 (42%)
Query: 378 VQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVG 437
++V+D + L GH++ V D SGK+L + S D +++LWD + C+
Sbjct: 132 IKVWDYETGDFERTLKGHTDSVQ--DISFDHSGKLL-ASCSADMTIKLWDFQGFECIRTM 188
Query: 438 TGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVW---------SFDGLSDDAEQPMNLKAKA 488
GH V +VA + +VS S D TIK+W +F G + +
Sbjct: 189 HGHDHNVSSVAIMPN-GDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGT 247
Query: 489 VVAAHGKD--INSLAVAPNDSLVCTGSQDRTA-CVWRLPDLVSVVTFRGHKRGIWSVEFS 545
++A+ D + VA + + C+ P+ S + G + +
Sbjct: 248 LIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPE--SSYSSISEATGSETKKSG 305
Query: 546 PVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLW 605
+++ S DKTIK+W +S G CL T GH + V F + G I+SC D +++W
Sbjct: 306 KPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVW 365
Query: 606 TVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLW 647
+ C+ T + HE + +L K TG D V +W
Sbjct: 366 DYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 407
Score = 218 (81.8 bits), Expect = 7.9e-15, P = 7.9e-15
Identities = 61/272 (22%), Positives = 119/272 (43%)
Query: 347 KRLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCA 406
+ L G+ + + D+ F + LA + ++++D C + GH V + A
Sbjct: 144 RTLKGHTDSVQDISF-DHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNV---SSVA 199
Query: 407 LSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTI 466
+ IV+ S+D ++++W+ ++ CV TGH V V ++ + S S+D T+
Sbjct: 200 IMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQD-GTLIASCSNDQTV 258
Query: 467 KVWSFDGLSDDAE-QPMNLKAKAVVAAHGKDINSLAVAPNDS---------LVCTGSQDR 516
+VW AE + + + A +S++ A + +GS+D+
Sbjct: 259 RVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDK 318
Query: 517 TACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEG 576
T +W + + ++T GH + V F + +++ + DKT+++W + C+KT
Sbjct: 319 TIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNA 378
Query: 577 HTSSVLRASFLTRGAQIVSCGADGLVKLWTVR 608
H V F +V+ D VK+W R
Sbjct: 379 HEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
Score = 210 (79.0 bits), Expect = 6.3e-14, P = 6.3e-14
Identities = 41/161 (25%), Positives = 75/161 (46%)
Query: 487 KAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSP 546
K ++ H + + P S++ + S+D T VW T +GH + + F
Sbjct: 101 KYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDH 160
Query: 547 VDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWT 606
+++ + S D TIK+W C++T GH +V + + G IVS D +K+W
Sbjct: 161 SGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWE 220
Query: 607 VRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLW 647
V+TG C+ T+ H + + + + + A+ +D V +W
Sbjct: 221 VQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVW 261
Score = 202 (76.2 bits), Expect = 4.9e-13, P = 4.9e-13
Identities = 44/138 (31%), Positives = 65/138 (47%)
Query: 514 QDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKT 573
Q R W +P GH+ + V F PV V+++AS D TIK+W G +T
Sbjct: 87 QKRDPKEW-IPRPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERT 145
Query: 574 FEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTE 633
+GHT SV SF G + SC AD +KLW + ECI T H+ + ++A+ +
Sbjct: 146 LKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGD 205
Query: 634 MFATGGSDALVNLWHDST 651
+ D + +W T
Sbjct: 206 HIVSASRDKTIKMWEVQT 223
Score = 170 (64.9 bits), Expect = 1.9e-11, Sum P(2) = 1.9e-11
Identities = 34/105 (32%), Positives = 53/105 (50%)
Query: 114 GGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVW 173
G L + D+ + +WDV G C GH V +LFH + + S +DD T+RVW
Sbjct: 308 GPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFH--SGGKFILSCADDKTLRVW 365
Query: 174 DLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLR 218
D K+C+ TL+ H VTS+ +++ D+ V +W+ R
Sbjct: 366 DYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
Score = 155 (59.6 bits), Expect = 8.0e-08, P = 8.0e-08
Identities = 38/133 (28%), Positives = 62/133 (46%)
Query: 42 INIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGH 101
+ + + S S+I + + T + P LL S + I++WD+ST CL + GH
Sbjct: 279 VECISWAPESSYSSISEATGSETKKSGKPGPFLL-SGSRDKTIKMWDVSTGMCLMTLVGH 337
Query: 102 DGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLL 161
D G+ H G + + D+ + VWD C H+ V+S+ FH +
Sbjct: 338 DNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAP--YV 395
Query: 162 FSGSDDATVRVWD 174
+GS D TV+VW+
Sbjct: 396 VTGSVDQTVKVWE 408
Score = 134 (52.2 bits), Expect = 2.0e-13, Sum P(2) = 2.0e-13
Identities = 32/140 (22%), Positives = 66/140 (47%)
Query: 31 GSFIA-CACGESINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWDL 89
G +A C+ +I + D T+ G ++++A+ P+ + S+ + I++W++
Sbjct: 162 GKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEV 221
Query: 90 STLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSS 149
T C++++ GH + + G L+A+ D+ V VW V C + H+ VV
Sbjct: 222 QTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVEC 281
Query: 150 ILFHPDTDKSLLFSGSDDAT 169
I + P++ S + + T
Sbjct: 282 ISWAPESSYSSISEATGSET 301
Score = 121 (47.7 bits), Expect = 2.0e-13, Sum P(2) = 2.0e-13
Identities = 23/70 (32%), Positives = 38/70 (54%)
Query: 161 LFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDY 220
L SGS D T+++WD+ C+ TL H + V + S G ++S DK + +WD ++
Sbjct: 311 LLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNK 370
Query: 221 SCKLTVPTYE 230
C T+ +E
Sbjct: 371 RCMKTLNAHE 380
Score = 65 (27.9 bits), Expect = 1.2e-19, Sum P(2) = 1.2e-19
Identities = 22/80 (27%), Positives = 38/80 (47%)
Query: 200 GSTLISAGRDKVVNLWDLRDYSCKLTVPTYE-MVEAVCAIPPGSAFDSFLSSYNQQTIK- 257
G L+S RDK + +WD+ C +T+ ++ V V G F LS + +T++
Sbjct: 308 GPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVL-FHSGGKF--ILSCADDKTLRV 364
Query: 258 ---KKRRSLEI-----HFIT 269
K +R ++ HF+T
Sbjct: 365 WDYKNKRCMKTLNAHEHFVT 384
Score = 63 (27.2 bits), Expect = 1.9e-11, Sum P(2) = 1.9e-11
Identities = 15/79 (18%), Positives = 36/79 (45%)
Query: 25 LVVSSDGSFIACACGE-SINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSRE 83
+ + +G I A + +I + ++ T G + + + + D L+ S + +
Sbjct: 198 VAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQT 257
Query: 84 IRVWDLSTLKCLRSWKGHD 102
+RVW ++T +C + H+
Sbjct: 258 VRVWVVATKECKAELREHE 276
Score = 37 (18.1 bits), Expect = 7.6e-17, Sum P(2) = 7.6e-17
Identities = 7/23 (30%), Positives = 10/23 (43%)
Query: 629 GKKTEMFATGGSDALVNLWHDST 651
GK +G D + +W ST
Sbjct: 305 GKPGPFLLSGSRDKTIKMWDVST 327
>RGD|620331 [details] [associations]
symbol:Pafah1b1 "platelet-activating factor acetylhydrolase,
isoform 1b, subunit 1" species:10116 "Rattus norvegicus"
[GO:0000132 "establishment of mitotic spindle orientation"
evidence=IEA;ISO] [GO:0000226 "microtubule cytoskeleton
organization" evidence=ISO] [GO:0000235 "astral microtubule"
evidence=IEA;ISO] [GO:0000776 "kinetochore" evidence=IEA;ISO]
[GO:0001667 "ameboidal cell migration" evidence=IEA;ISO]
[GO:0001675 "acrosome assembly" evidence=IEA;ISO] [GO:0001764
"neuron migration" evidence=ISO;IMP] [GO:0001961 "positive
regulation of cytokine-mediated signaling pathway"
evidence=IEA;ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005635 "nuclear envelope"
evidence=ISO;IDA] [GO:0005737 "cytoplasm" evidence=IEA;ISO]
[GO:0005813 "centrosome" evidence=IEA;ISO] [GO:0005829 "cytosol"
evidence=IDA] [GO:0005871 "kinesin complex" evidence=IDA]
[GO:0005874 "microtubule" evidence=IEA] [GO:0005875 "microtubule
associated complex" evidence=ISO] [GO:0005938 "cell cortex"
evidence=IEA;ISO] [GO:0006810 "transport" evidence=IEA] [GO:0007017
"microtubule-based process" evidence=ISO] [GO:0007067 "mitosis"
evidence=IEA] [GO:0007097 "nuclear migration" evidence=IMP]
[GO:0007268 "synaptic transmission" evidence=IEA;ISO] [GO:0007405
"neuroblast proliferation" evidence=IEA;ISO] [GO:0007420 "brain
development" evidence=IEP] [GO:0007611 "learning or memory"
evidence=IEA;ISO] [GO:0008017 "microtubule binding"
evidence=IEA;ISO] [GO:0008090 "retrograde axon cargo transport"
evidence=IEA;ISO] [GO:0008344 "adult locomotory behavior"
evidence=IEA;ISO] [GO:0009306 "protein secretion" evidence=IEA;ISO]
[GO:0010977 "negative regulation of neuron projection development"
evidence=IMP] [GO:0015630 "microtubule cytoskeleton" evidence=ISO]
[GO:0016042 "lipid catabolic process" evidence=IEA] [GO:0016477
"cell migration" evidence=ISO] [GO:0017145 "stem cell division"
evidence=IMP] [GO:0019226 "transmission of nerve impulse"
evidence=ISO] [GO:0021540 "corpus callosum morphogenesis"
evidence=IEA;ISO] [GO:0021766 "hippocampus development"
evidence=IEA;ISO] [GO:0021819 "layer formation in cerebral cortex"
evidence=IEA;ISO] [GO:0021895 "cerebral cortex neuron
differentiation" evidence=IMP] [GO:0021987 "cerebral cortex
development" evidence=ISO] [GO:0030036 "actin cytoskeleton
organization" evidence=IEA;ISO] [GO:0030426 "growth cone"
evidence=IDA] [GO:0031023 "microtubule organizing center
organization" evidence=IEA;ISO] [GO:0031252 "cell leading edge"
evidence=IEA;ISO] [GO:0031512 "motile primary cilium"
evidence=IEA;ISO] [GO:0031965 "nuclear membrane" evidence=IEA]
[GO:0031982 "vesicle" evidence=IDA] [GO:0032319 "regulation of Rho
GTPase activity" evidence=IEA;ISO] [GO:0032403 "protein complex
binding" evidence=IPI] [GO:0033267 "axon part" evidence=IDA]
[GO:0036035 "osteoclast development" evidence=IEA;ISO] [GO:0042803
"protein homodimerization activity" evidence=IEA;ISO] [GO:0043005
"neuron projection" evidence=IDA] [GO:0043025 "neuronal cell body"
evidence=IDA] [GO:0045502 "dynein binding" evidence=ISO]
[GO:0045505 "dynein intermediate chain binding" evidence=IDA]
[GO:0045773 "positive regulation of axon extension" evidence=IMP]
[GO:0045931 "positive regulation of mitotic cell cycle"
evidence=IMP] [GO:0046329 "negative regulation of JNK cascade"
evidence=IEA;ISO] [GO:0047179 "platelet-activating factor
acetyltransferase activity" evidence=TAS] [GO:0047496 "vesicle
transport along microtubule" evidence=IEA;ISO] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA;ISO] [GO:0048854
"brain morphogenesis" evidence=IEA;ISO] [GO:0050885 "neuromuscular
process controlling balance" evidence=IEA;ISO] [GO:0051081 "nuclear
envelope disassembly" evidence=IEA;ISO] [GO:0051219 "phosphoprotein
binding" evidence=IEA;ISO] [GO:0051301 "cell division"
evidence=IEA] [GO:0051660 "establishment of centrosome
localization" evidence=IMP] [GO:0005730 "nucleolus" evidence=ISO]
[GO:0031513 "nonmotile primary cilium" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 RGD:620331
GO:GO:0005829 GO:GO:0005938 GO:GO:0000132 GO:GO:0005635
GO:GO:0005813 GO:GO:0048471 GO:GO:0021766 GO:GO:0001764
GO:GO:0033267 GO:GO:0005871 GO:GO:0031252 GO:GO:0000776
GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036 GO:GO:0045931
GO:GO:0007268 GO:GO:0043025 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885
GO:GO:0030426 GO:GO:0007611 GO:GO:0007405 GO:GO:0008090
InterPro:IPR013720 Pfam:PF08513 GO:GO:0045773 GO:GO:0001675
GO:GO:0000235 GO:GO:0031982 GO:GO:0032319 GO:GO:0031023
GO:GO:0007097 GO:GO:0048854 GO:GO:0021540 GO:GO:0021819
GO:GO:0047496 GO:GO:0010977 GO:GO:0017145 GO:GO:0031512
GO:GO:0021895 GO:GO:0045505 HOGENOM:HOG000184015 HOVERGEN:HBG006271
KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 GO:GO:0051081
GO:GO:0051660 EMBL:AF016049 EMBL:BC072510 IPI:IPI00231298
RefSeq:NP_113951.1 UniGene:Rn.5827 ProteinModelPortal:P63004
SMR:P63004 IntAct:P63004 STRING:P63004 PhosphoSite:P63004
World-2DPAGE:0004:P63004 PRIDE:P63004 GeneID:83572 KEGG:rno:83572
InParanoid:P63004 NextBio:616071 ArrayExpress:P63004
Genevestigator:P63004 GermOnline:ENSRNOG00000002755 GO:GO:0047179
Uniprot:P63004
Length = 410
Score = 254 (94.5 bits), Expect = 6.1e-19, P = 6.1e-19
Identities = 64/236 (27%), Positives = 104/236 (44%)
Query: 53 KSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHP 112
K + G +T + P ++ S+ I+VWD T R+ KGH ++
Sbjct: 101 KYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDH 160
Query: 113 SGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRV 172
SG LLA+ AD + +WD G C GH VSS+ P+ D + S S D T+++
Sbjct: 161 SGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDH--IVSASRDKTIKM 218
Query: 173 WDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYEMV 232
W++ CV T H V + DG+ + S D+ V +W + CK + +E V
Sbjct: 219 WEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHV 278
Query: 233 EAVCAIPPGSAFDSFLSSYNQQTIKKKRRSLEIHFITVGERG-IVRMWNADSA-CL 286
+ P S++ S + +T K + F+ G R ++MW+ + CL
Sbjct: 279 VECISWAPESSYSSISEATGSETKKSGKPG---PFLLSGSRDKTIKMWDVSTGMCL 331
Score = 240 (89.5 bits), Expect = 7.6e-17, Sum P(2) = 7.6e-17
Identities = 65/205 (31%), Positives = 92/205 (44%)
Query: 438 TGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDI 497
+GH V V F + +VS S D TIKVW ++ + D E+ LK H +
Sbjct: 105 SGHRSPVTRVIFHPVF-SVMVSASEDATIKVWDYE--TGDFER--TLKG------HTDSV 153
Query: 498 NSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGD 557
++ + L+ + S D T +W + T GH + SV P +++AS D
Sbjct: 154 QDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRD 213
Query: 558 KTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYD 617
KTIK+W + G C+KTF GH V G I SC D V++W V T EC A
Sbjct: 214 KTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELR 273
Query: 618 KHEDKI----WALAVGKKTEMFATG 638
+HE + WA + ATG
Sbjct: 274 EHEHVVECISWAPESSYSSISEATG 298
Score = 239 (89.2 bits), Expect = 1.2e-19, Sum P(2) = 1.2e-19
Identities = 46/147 (31%), Positives = 79/147 (53%)
Query: 41 SINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKG 100
+I + D + T++G +D++ ++ KLL S I++WD +C+R+ G
Sbjct: 131 TIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHG 190
Query: 101 HDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSL 160
HD +A P+G + +A D+ + +W+V G+C F GH+ V + P+ D +L
Sbjct: 191 HDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMV--RPNQDGTL 248
Query: 161 LFSGSDDATVRVWDLLAKKCVATLDKH 187
+ S S+D TVRVW + K+C A L +H
Sbjct: 249 IASCSNDQTVRVWVVATKECKAELREH 275
Score = 228 (85.3 bits), Expect = 5.8e-16, P = 5.8e-16
Identities = 73/282 (25%), Positives = 121/282 (42%)
Query: 378 VQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVG 437
++V+D + L GH++ V D SGK+L + S D +++LWD + C+
Sbjct: 132 IKVWDYETGDFERTLKGHTDSVQ--DISFDHSGKLL-ASCSADMTIKLWDFQGFECIRTM 188
Query: 438 TGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVW---------SFDGLSDDAEQPMNLKAKA 488
GH V +VA + +VS S D TIK+W +F G + +
Sbjct: 189 HGHDHNVSSVAIMPN-GDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGT 247
Query: 489 VVAAHGKD--INSLAVAPNDSLVCTGSQDRTA-CVWRLPDLVSVVTFRGHKRGIWSVEFS 545
++A+ D + VA + + C+ P+ S + G + +
Sbjct: 248 LIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPE--SSYSSISEATGSETKKSG 305
Query: 546 PVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLW 605
+++ S DKTIK+W +S G CL T GH + V F + G I+SC D +++W
Sbjct: 306 KPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVW 365
Query: 606 TVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLW 647
+ C+ T + HE + +L K TG D V +W
Sbjct: 366 DYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 407
Score = 218 (81.8 bits), Expect = 7.9e-15, P = 7.9e-15
Identities = 61/272 (22%), Positives = 119/272 (43%)
Query: 347 KRLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCA 406
+ L G+ + + D+ F + LA + ++++D C + GH V + A
Sbjct: 144 RTLKGHTDSVQDISF-DHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNV---SSVA 199
Query: 407 LSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTI 466
+ IV+ S+D ++++W+ ++ CV TGH V V ++ + S S+D T+
Sbjct: 200 IMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQD-GTLIASCSNDQTV 258
Query: 467 KVWSFDGLSDDAE-QPMNLKAKAVVAAHGKDINSLAVAPNDS---------LVCTGSQDR 516
+VW AE + + + A +S++ A + +GS+D+
Sbjct: 259 RVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDK 318
Query: 517 TACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEG 576
T +W + + ++T GH + V F + +++ + DKT+++W + C+KT
Sbjct: 319 TIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNA 378
Query: 577 HTSSVLRASFLTRGAQIVSCGADGLVKLWTVR 608
H V F +V+ D VK+W R
Sbjct: 379 HEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
Score = 210 (79.0 bits), Expect = 6.3e-14, P = 6.3e-14
Identities = 41/161 (25%), Positives = 75/161 (46%)
Query: 487 KAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSP 546
K ++ H + + P S++ + S+D T VW T +GH + + F
Sbjct: 101 KYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDH 160
Query: 547 VDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWT 606
+++ + S D TIK+W C++T GH +V + + G IVS D +K+W
Sbjct: 161 SGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWE 220
Query: 607 VRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLW 647
V+TG C+ T+ H + + + + + A+ +D V +W
Sbjct: 221 VQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVW 261
Score = 202 (76.2 bits), Expect = 4.9e-13, P = 4.9e-13
Identities = 44/138 (31%), Positives = 65/138 (47%)
Query: 514 QDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKT 573
Q R W +P GH+ + V F PV V+++AS D TIK+W G +T
Sbjct: 87 QKRDPKEW-IPRPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERT 145
Query: 574 FEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTE 633
+GHT SV SF G + SC AD +KLW + ECI T H+ + ++A+ +
Sbjct: 146 LKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGD 205
Query: 634 MFATGGSDALVNLWHDST 651
+ D + +W T
Sbjct: 206 HIVSASRDKTIKMWEVQT 223
Score = 170 (64.9 bits), Expect = 1.9e-11, Sum P(2) = 1.9e-11
Identities = 34/105 (32%), Positives = 53/105 (50%)
Query: 114 GGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVW 173
G L + D+ + +WDV G C GH V +LFH + + S +DD T+RVW
Sbjct: 308 GPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFH--SGGKFILSCADDKTLRVW 365
Query: 174 DLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLR 218
D K+C+ TL+ H VTS+ +++ D+ V +W+ R
Sbjct: 366 DYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
Score = 155 (59.6 bits), Expect = 8.0e-08, P = 8.0e-08
Identities = 38/133 (28%), Positives = 62/133 (46%)
Query: 42 INIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGH 101
+ + + S S+I + + T + P LL S + I++WD+ST CL + GH
Sbjct: 279 VECISWAPESSYSSISEATGSETKKSGKPGPFLL-SGSRDKTIKMWDVSTGMCLMTLVGH 337
Query: 102 DGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLL 161
D G+ H G + + D+ + VWD C H+ V+S+ FH +
Sbjct: 338 DNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAP--YV 395
Query: 162 FSGSDDATVRVWD 174
+GS D TV+VW+
Sbjct: 396 VTGSVDQTVKVWE 408
Score = 134 (52.2 bits), Expect = 2.0e-13, Sum P(2) = 2.0e-13
Identities = 32/140 (22%), Positives = 66/140 (47%)
Query: 31 GSFIA-CACGESINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWDL 89
G +A C+ +I + D T+ G ++++A+ P+ + S+ + I++W++
Sbjct: 162 GKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEV 221
Query: 90 STLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSS 149
T C++++ GH + + G L+A+ D+ V VW V C + H+ VV
Sbjct: 222 QTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVEC 281
Query: 150 ILFHPDTDKSLLFSGSDDAT 169
I + P++ S + + T
Sbjct: 282 ISWAPESSYSSISEATGSET 301
Score = 121 (47.7 bits), Expect = 2.0e-13, Sum P(2) = 2.0e-13
Identities = 23/70 (32%), Positives = 38/70 (54%)
Query: 161 LFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDY 220
L SGS D T+++WD+ C+ TL H + V + S G ++S DK + +WD ++
Sbjct: 311 LLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNK 370
Query: 221 SCKLTVPTYE 230
C T+ +E
Sbjct: 371 RCMKTLNAHE 380
Score = 65 (27.9 bits), Expect = 1.2e-19, Sum P(2) = 1.2e-19
Identities = 22/80 (27%), Positives = 38/80 (47%)
Query: 200 GSTLISAGRDKVVNLWDLRDYSCKLTVPTYE-MVEAVCAIPPGSAFDSFLSSYNQQTIK- 257
G L+S RDK + +WD+ C +T+ ++ V V G F LS + +T++
Sbjct: 308 GPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVL-FHSGGKF--ILSCADDKTLRV 364
Query: 258 ---KKRRSLEI-----HFIT 269
K +R ++ HF+T
Sbjct: 365 WDYKNKRCMKTLNAHEHFVT 384
Score = 63 (27.2 bits), Expect = 1.9e-11, Sum P(2) = 1.9e-11
Identities = 15/79 (18%), Positives = 36/79 (45%)
Query: 25 LVVSSDGSFIACACGE-SINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSRE 83
+ + +G I A + +I + ++ T G + + + + D L+ S + +
Sbjct: 198 VAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQT 257
Query: 84 IRVWDLSTLKCLRSWKGHD 102
+RVW ++T +C + H+
Sbjct: 258 VRVWVVATKECKAELREHE 276
Score = 37 (18.1 bits), Expect = 7.6e-17, Sum P(2) = 7.6e-17
Identities = 7/23 (30%), Positives = 10/23 (43%)
Query: 629 GKKTEMFATGGSDALVNLWHDST 651
GK +G D + +W ST
Sbjct: 305 GKPGPFLLSGSRDKTIKMWDVST 327
>UNIPROTKB|P63004 [details] [associations]
symbol:Pafah1b1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:10116 "Rattus norvegicus" [GO:0007067
"mitosis" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
RGD:620331 GO:GO:0005829 GO:GO:0005938 GO:GO:0000132 GO:GO:0005635
GO:GO:0005813 GO:GO:0048471 GO:GO:0021766 GO:GO:0001764
GO:GO:0033267 GO:GO:0005871 GO:GO:0031252 GO:GO:0000776
GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036 GO:GO:0045931
GO:GO:0007268 GO:GO:0043025 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885
GO:GO:0030426 GO:GO:0007611 GO:GO:0007405 GO:GO:0008090
InterPro:IPR013720 Pfam:PF08513 GO:GO:0045773 GO:GO:0001675
GO:GO:0000235 GO:GO:0031982 GO:GO:0032319 GO:GO:0031023
GO:GO:0007097 GO:GO:0048854 GO:GO:0021540 GO:GO:0021819
GO:GO:0047496 GO:GO:0010977 GO:GO:0017145 GO:GO:0031512
GO:GO:0021895 GO:GO:0045505 HOGENOM:HOG000184015 HOVERGEN:HBG006271
KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 GO:GO:0051081
GO:GO:0051660 EMBL:AF016049 EMBL:BC072510 IPI:IPI00231298
RefSeq:NP_113951.1 UniGene:Rn.5827 ProteinModelPortal:P63004
SMR:P63004 IntAct:P63004 STRING:P63004 PhosphoSite:P63004
World-2DPAGE:0004:P63004 PRIDE:P63004 GeneID:83572 KEGG:rno:83572
InParanoid:P63004 NextBio:616071 ArrayExpress:P63004
Genevestigator:P63004 GermOnline:ENSRNOG00000002755 GO:GO:0047179
Uniprot:P63004
Length = 410
Score = 254 (94.5 bits), Expect = 6.1e-19, P = 6.1e-19
Identities = 64/236 (27%), Positives = 104/236 (44%)
Query: 53 KSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHP 112
K + G +T + P ++ S+ I+VWD T R+ KGH ++
Sbjct: 101 KYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDH 160
Query: 113 SGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRV 172
SG LLA+ AD + +WD G C GH VSS+ P+ D + S S D T+++
Sbjct: 161 SGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDH--IVSASRDKTIKM 218
Query: 173 WDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYEMV 232
W++ CV T H V + DG+ + S D+ V +W + CK + +E V
Sbjct: 219 WEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHV 278
Query: 233 EAVCAIPPGSAFDSFLSSYNQQTIKKKRRSLEIHFITVGERG-IVRMWNADSA-CL 286
+ P S++ S + +T K + F+ G R ++MW+ + CL
Sbjct: 279 VECISWAPESSYSSISEATGSETKKSGKPG---PFLLSGSRDKTIKMWDVSTGMCL 331
Score = 240 (89.5 bits), Expect = 7.6e-17, Sum P(2) = 7.6e-17
Identities = 65/205 (31%), Positives = 92/205 (44%)
Query: 438 TGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDI 497
+GH V V F + +VS S D TIKVW ++ + D E+ LK H +
Sbjct: 105 SGHRSPVTRVIFHPVF-SVMVSASEDATIKVWDYE--TGDFER--TLKG------HTDSV 153
Query: 498 NSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGD 557
++ + L+ + S D T +W + T GH + SV P +++AS D
Sbjct: 154 QDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRD 213
Query: 558 KTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYD 617
KTIK+W + G C+KTF GH V G I SC D V++W V T EC A
Sbjct: 214 KTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELR 273
Query: 618 KHEDKI----WALAVGKKTEMFATG 638
+HE + WA + ATG
Sbjct: 274 EHEHVVECISWAPESSYSSISEATG 298
Score = 239 (89.2 bits), Expect = 1.2e-19, Sum P(2) = 1.2e-19
Identities = 46/147 (31%), Positives = 79/147 (53%)
Query: 41 SINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKG 100
+I + D + T++G +D++ ++ KLL S I++WD +C+R+ G
Sbjct: 131 TIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHG 190
Query: 101 HDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSL 160
HD +A P+G + +A D+ + +W+V G+C F GH+ V + P+ D +L
Sbjct: 191 HDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMV--RPNQDGTL 248
Query: 161 LFSGSDDATVRVWDLLAKKCVATLDKH 187
+ S S+D TVRVW + K+C A L +H
Sbjct: 249 IASCSNDQTVRVWVVATKECKAELREH 275
Score = 228 (85.3 bits), Expect = 5.8e-16, P = 5.8e-16
Identities = 73/282 (25%), Positives = 121/282 (42%)
Query: 378 VQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVG 437
++V+D + L GH++ V D SGK+L + S D +++LWD + C+
Sbjct: 132 IKVWDYETGDFERTLKGHTDSVQ--DISFDHSGKLL-ASCSADMTIKLWDFQGFECIRTM 188
Query: 438 TGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVW---------SFDGLSDDAEQPMNLKAKA 488
GH V +VA + +VS S D TIK+W +F G + +
Sbjct: 189 HGHDHNVSSVAIMPN-GDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGT 247
Query: 489 VVAAHGKD--INSLAVAPNDSLVCTGSQDRTA-CVWRLPDLVSVVTFRGHKRGIWSVEFS 545
++A+ D + VA + + C+ P+ S + G + +
Sbjct: 248 LIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPE--SSYSSISEATGSETKKSG 305
Query: 546 PVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLW 605
+++ S DKTIK+W +S G CL T GH + V F + G I+SC D +++W
Sbjct: 306 KPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVW 365
Query: 606 TVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLW 647
+ C+ T + HE + +L K TG D V +W
Sbjct: 366 DYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 407
Score = 218 (81.8 bits), Expect = 7.9e-15, P = 7.9e-15
Identities = 61/272 (22%), Positives = 119/272 (43%)
Query: 347 KRLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCA 406
+ L G+ + + D+ F + LA + ++++D C + GH V + A
Sbjct: 144 RTLKGHTDSVQDISF-DHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNV---SSVA 199
Query: 407 LSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTI 466
+ IV+ S+D ++++W+ ++ CV TGH V V ++ + S S+D T+
Sbjct: 200 IMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQD-GTLIASCSNDQTV 258
Query: 467 KVWSFDGLSDDAE-QPMNLKAKAVVAAHGKDINSLAVAPNDS---------LVCTGSQDR 516
+VW AE + + + A +S++ A + +GS+D+
Sbjct: 259 RVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDK 318
Query: 517 TACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEG 576
T +W + + ++T GH + V F + +++ + DKT+++W + C+KT
Sbjct: 319 TIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNA 378
Query: 577 HTSSVLRASFLTRGAQIVSCGADGLVKLWTVR 608
H V F +V+ D VK+W R
Sbjct: 379 HEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
Score = 210 (79.0 bits), Expect = 6.3e-14, P = 6.3e-14
Identities = 41/161 (25%), Positives = 75/161 (46%)
Query: 487 KAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSP 546
K ++ H + + P S++ + S+D T VW T +GH + + F
Sbjct: 101 KYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDH 160
Query: 547 VDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWT 606
+++ + S D TIK+W C++T GH +V + + G IVS D +K+W
Sbjct: 161 SGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWE 220
Query: 607 VRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLW 647
V+TG C+ T+ H + + + + + A+ +D V +W
Sbjct: 221 VQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVW 261
Score = 202 (76.2 bits), Expect = 4.9e-13, P = 4.9e-13
Identities = 44/138 (31%), Positives = 65/138 (47%)
Query: 514 QDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKT 573
Q R W +P GH+ + V F PV V+++AS D TIK+W G +T
Sbjct: 87 QKRDPKEW-IPRPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERT 145
Query: 574 FEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTE 633
+GHT SV SF G + SC AD +KLW + ECI T H+ + ++A+ +
Sbjct: 146 LKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGD 205
Query: 634 MFATGGSDALVNLWHDST 651
+ D + +W T
Sbjct: 206 HIVSASRDKTIKMWEVQT 223
Score = 170 (64.9 bits), Expect = 1.9e-11, Sum P(2) = 1.9e-11
Identities = 34/105 (32%), Positives = 53/105 (50%)
Query: 114 GGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVW 173
G L + D+ + +WDV G C GH V +LFH + + S +DD T+RVW
Sbjct: 308 GPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFH--SGGKFILSCADDKTLRVW 365
Query: 174 DLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLR 218
D K+C+ TL+ H VTS+ +++ D+ V +W+ R
Sbjct: 366 DYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
Score = 155 (59.6 bits), Expect = 8.0e-08, P = 8.0e-08
Identities = 38/133 (28%), Positives = 62/133 (46%)
Query: 42 INIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGH 101
+ + + S S+I + + T + P LL S + I++WD+ST CL + GH
Sbjct: 279 VECISWAPESSYSSISEATGSETKKSGKPGPFLL-SGSRDKTIKMWDVSTGMCLMTLVGH 337
Query: 102 DGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLL 161
D G+ H G + + D+ + VWD C H+ V+S+ FH +
Sbjct: 338 DNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAP--YV 395
Query: 162 FSGSDDATVRVWD 174
+GS D TV+VW+
Sbjct: 396 VTGSVDQTVKVWE 408
Score = 134 (52.2 bits), Expect = 2.0e-13, Sum P(2) = 2.0e-13
Identities = 32/140 (22%), Positives = 66/140 (47%)
Query: 31 GSFIA-CACGESINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWDL 89
G +A C+ +I + D T+ G ++++A+ P+ + S+ + I++W++
Sbjct: 162 GKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEV 221
Query: 90 STLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSS 149
T C++++ GH + + G L+A+ D+ V VW V C + H+ VV
Sbjct: 222 QTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVEC 281
Query: 150 ILFHPDTDKSLLFSGSDDAT 169
I + P++ S + + T
Sbjct: 282 ISWAPESSYSSISEATGSET 301
Score = 121 (47.7 bits), Expect = 2.0e-13, Sum P(2) = 2.0e-13
Identities = 23/70 (32%), Positives = 38/70 (54%)
Query: 161 LFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDY 220
L SGS D T+++WD+ C+ TL H + V + S G ++S DK + +WD ++
Sbjct: 311 LLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNK 370
Query: 221 SCKLTVPTYE 230
C T+ +E
Sbjct: 371 RCMKTLNAHE 380
Score = 65 (27.9 bits), Expect = 1.2e-19, Sum P(2) = 1.2e-19
Identities = 22/80 (27%), Positives = 38/80 (47%)
Query: 200 GSTLISAGRDKVVNLWDLRDYSCKLTVPTYE-MVEAVCAIPPGSAFDSFLSSYNQQTIK- 257
G L+S RDK + +WD+ C +T+ ++ V V G F LS + +T++
Sbjct: 308 GPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVL-FHSGGKF--ILSCADDKTLRV 364
Query: 258 ---KKRRSLEI-----HFIT 269
K +R ++ HF+T
Sbjct: 365 WDYKNKRCMKTLNAHEHFVT 384
Score = 63 (27.2 bits), Expect = 1.9e-11, Sum P(2) = 1.9e-11
Identities = 15/79 (18%), Positives = 36/79 (45%)
Query: 25 LVVSSDGSFIACACGE-SINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSRE 83
+ + +G I A + +I + ++ T G + + + + D L+ S + +
Sbjct: 198 VAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQT 257
Query: 84 IRVWDLSTLKCLRSWKGHD 102
+RVW ++T +C + H+
Sbjct: 258 VRVWVVATKECKAELREHE 276
Score = 37 (18.1 bits), Expect = 7.6e-17, Sum P(2) = 7.6e-17
Identities = 7/23 (30%), Positives = 10/23 (43%)
Query: 629 GKKTEMFATGGSDALVNLWHDST 651
GK +G D + +W ST
Sbjct: 305 GKPGPFLLSGSRDKTIKMWDVST 327
>UNIPROTKB|P43033 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9913 "Bos taurus" [GO:0045502 "dynein
binding" evidence=IDA] [GO:0034452 "dynactin binding" evidence=IDA]
[GO:0046469 "platelet activating factor metabolic process"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0043274
"phospholipase binding" evidence=IDA] [GO:0008201 "heparin binding"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0008017 "microtubule binding" evidence=IDA] [GO:0031965
"nuclear membrane" evidence=IEA] [GO:0005819 "spindle"
evidence=IEA] [GO:0005815 "microtubule organizing center"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0030154
"cell differentiation" evidence=IEA] [GO:0016042 "lipid catabolic
process" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005829
GO:GO:0007399 GO:GO:0030154 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005819
InterPro:IPR019775 GO:GO:0016042 GO:GO:0006810 GO:GO:0031965
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008201
GO:GO:0005815 InterPro:IPR013720 Pfam:PF08513 GO:GO:0008017
GO:GO:0005874 GO:GO:0034452 GO:GO:0045502 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
EMBL:D30615 IPI:IPI00703460 RefSeq:NP_777088.1 UniGene:Bt.111460
ProteinModelPortal:P43033 SMR:P43033 IntAct:P43033 STRING:P43033
PRIDE:P43033 GeneID:282513 KEGG:bta:282513 CTD:5048
NextBio:20806263 GO:GO:0043274 GO:GO:0046469 Uniprot:P43033
Length = 410
Score = 254 (94.5 bits), Expect = 6.1e-19, P = 6.1e-19
Identities = 64/236 (27%), Positives = 104/236 (44%)
Query: 53 KSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHP 112
K + G +T + P ++ S+ I+VWD T R+ KGH ++
Sbjct: 101 KYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVEDISFDH 160
Query: 113 SGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRV 172
SG LLA+ AD + +WD G C GH VSS+ P+ D + S S D T+++
Sbjct: 161 SGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDH--IVSASRDKTIKM 218
Query: 173 WDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYEMV 232
W++ CV T H V + DG+ + S D+ V +W + CK + +E V
Sbjct: 219 WEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHV 278
Query: 233 EAVCAIPPGSAFDSFLSSYNQQTIKKKRRSLEIHFITVGERG-IVRMWNADSA-CL 286
+ P S++ S + +T K + F+ G R ++MW+ + CL
Sbjct: 279 VECISWAPESSYSSISEATGSETKKSGKPG---PFLLSGSRDKTIKMWDVSTGMCL 331
Score = 240 (89.5 bits), Expect = 7.6e-17, Sum P(2) = 7.6e-17
Identities = 65/205 (31%), Positives = 92/205 (44%)
Query: 438 TGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDI 497
+GH V V F + +VS S D TIKVW ++ + D E+ LK H +
Sbjct: 105 SGHRSPVTRVIFHPVF-SVMVSASEDATIKVWDYE--TGDFER--TLKG------HTDSV 153
Query: 498 NSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGD 557
++ + L+ + S D T +W + T GH + SV P +++AS D
Sbjct: 154 EDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRD 213
Query: 558 KTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYD 617
KTIK+W + G C+KTF GH V G I SC D V++W V T EC A
Sbjct: 214 KTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELR 273
Query: 618 KHEDKI----WALAVGKKTEMFATG 638
+HE + WA + ATG
Sbjct: 274 EHEHVVECISWAPESSYSSISEATG 298
Score = 239 (89.2 bits), Expect = 1.2e-19, Sum P(2) = 1.2e-19
Identities = 46/147 (31%), Positives = 79/147 (53%)
Query: 41 SINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKG 100
+I + D + T++G +D++ ++ KLL S I++WD +C+R+ G
Sbjct: 131 TIKVWDYETGDFERTLKGHTDSVEDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHG 190
Query: 101 HDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSL 160
HD +A P+G + +A D+ + +W+V G+C F GH+ V + P+ D +L
Sbjct: 191 HDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMV--RPNQDGTL 248
Query: 161 LFSGSDDATVRVWDLLAKKCVATLDKH 187
+ S S+D TVRVW + K+C A L +H
Sbjct: 249 IASCSNDQTVRVWVVATKECKAELREH 275
Score = 227 (85.0 bits), Expect = 7.6e-16, P = 7.6e-16
Identities = 73/282 (25%), Positives = 121/282 (42%)
Query: 378 VQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVG 437
++V+D + L GH++ V D SGK+L + S D +++LWD + C+
Sbjct: 132 IKVWDYETGDFERTLKGHTDSVE--DISFDHSGKLL-ASCSADMTIKLWDFQGFECIRTM 188
Query: 438 TGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVW---------SFDGLSDDAEQPMNLKAKA 488
GH V +VA + +VS S D TIK+W +F G + +
Sbjct: 189 HGHDHNVSSVAIMPN-GDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGT 247
Query: 489 VVAAHGKD--INSLAVAPNDSLVCTGSQDRTA-CVWRLPDLVSVVTFRGHKRGIWSVEFS 545
++A+ D + VA + + C+ P+ S + G + +
Sbjct: 248 LIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPE--SSYSSISEATGSETKKSG 305
Query: 546 PVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLW 605
+++ S DKTIK+W +S G CL T GH + V F + G I+SC D +++W
Sbjct: 306 KPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVW 365
Query: 606 TVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLW 647
+ C+ T + HE + +L K TG D V +W
Sbjct: 366 DYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 407
Score = 217 (81.4 bits), Expect = 1.0e-14, P = 1.0e-14
Identities = 61/272 (22%), Positives = 119/272 (43%)
Query: 347 KRLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCA 406
+ L G+ + + D+ F + LA + ++++D C + GH V + A
Sbjct: 144 RTLKGHTDSVEDISF-DHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNV---SSVA 199
Query: 407 LSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTI 466
+ IV+ S+D ++++W+ ++ CV TGH V V ++ + S S+D T+
Sbjct: 200 IMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQD-GTLIASCSNDQTV 258
Query: 467 KVWSFDGLSDDAE-QPMNLKAKAVVAAHGKDINSLAVAPNDS---------LVCTGSQDR 516
+VW AE + + + A +S++ A + +GS+D+
Sbjct: 259 RVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDK 318
Query: 517 TACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEG 576
T +W + + ++T GH + V F + +++ + DKT+++W + C+KT
Sbjct: 319 TIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNA 378
Query: 577 HTSSVLRASFLTRGAQIVSCGADGLVKLWTVR 608
H V F +V+ D VK+W R
Sbjct: 379 HEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
Score = 209 (78.6 bits), Expect = 8.1e-14, P = 8.1e-14
Identities = 41/161 (25%), Positives = 75/161 (46%)
Query: 487 KAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSP 546
K ++ H + + P S++ + S+D T VW T +GH + + F
Sbjct: 101 KYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVEDISFDH 160
Query: 547 VDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWT 606
+++ + S D TIK+W C++T GH +V + + G IVS D +K+W
Sbjct: 161 SGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWE 220
Query: 607 VRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLW 647
V+TG C+ T+ H + + + + + A+ +D V +W
Sbjct: 221 VQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVW 261
Score = 201 (75.8 bits), Expect = 6.4e-13, P = 6.4e-13
Identities = 44/138 (31%), Positives = 65/138 (47%)
Query: 514 QDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKT 573
Q R W +P GH+ + V F PV V+++AS D TIK+W G +T
Sbjct: 87 QKRDPKEW-IPRPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERT 145
Query: 574 FEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTE 633
+GHT SV SF G + SC AD +KLW + ECI T H+ + ++A+ +
Sbjct: 146 LKGHTDSVEDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGD 205
Query: 634 MFATGGSDALVNLWHDST 651
+ D + +W T
Sbjct: 206 HIVSASRDKTIKMWEVQT 223
Score = 170 (64.9 bits), Expect = 1.9e-11, Sum P(2) = 1.9e-11
Identities = 34/105 (32%), Positives = 53/105 (50%)
Query: 114 GGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVW 173
G L + D+ + +WDV G C GH V +LFH + + S +DD T+RVW
Sbjct: 308 GPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFH--SGGKFILSCADDKTLRVW 365
Query: 174 DLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLR 218
D K+C+ TL+ H VTS+ +++ D+ V +W+ R
Sbjct: 366 DYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
Score = 155 (59.6 bits), Expect = 8.0e-08, P = 8.0e-08
Identities = 38/133 (28%), Positives = 62/133 (46%)
Query: 42 INIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGH 101
+ + + S S+I + + T + P LL S + I++WD+ST CL + GH
Sbjct: 279 VECISWAPESSYSSISEATGSETKKSGKPGPFLL-SGSRDKTIKMWDVSTGMCLMTLVGH 337
Query: 102 DGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLL 161
D G+ H G + + D+ + VWD C H+ V+S+ FH +
Sbjct: 338 DNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAP--YV 395
Query: 162 FSGSDDATVRVWD 174
+GS D TV+VW+
Sbjct: 396 VTGSVDQTVKVWE 408
Score = 134 (52.2 bits), Expect = 2.0e-13, Sum P(2) = 2.0e-13
Identities = 32/140 (22%), Positives = 66/140 (47%)
Query: 31 GSFIA-CACGESINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWDL 89
G +A C+ +I + D T+ G ++++A+ P+ + S+ + I++W++
Sbjct: 162 GKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEV 221
Query: 90 STLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSS 149
T C++++ GH + + G L+A+ D+ V VW V C + H+ VV
Sbjct: 222 QTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVEC 281
Query: 150 ILFHPDTDKSLLFSGSDDAT 169
I + P++ S + + T
Sbjct: 282 ISWAPESSYSSISEATGSET 301
Score = 121 (47.7 bits), Expect = 2.0e-13, Sum P(2) = 2.0e-13
Identities = 23/70 (32%), Positives = 38/70 (54%)
Query: 161 LFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDY 220
L SGS D T+++WD+ C+ TL H + V + S G ++S DK + +WD ++
Sbjct: 311 LLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNK 370
Query: 221 SCKLTVPTYE 230
C T+ +E
Sbjct: 371 RCMKTLNAHE 380
Score = 65 (27.9 bits), Expect = 1.2e-19, Sum P(2) = 1.2e-19
Identities = 22/80 (27%), Positives = 38/80 (47%)
Query: 200 GSTLISAGRDKVVNLWDLRDYSCKLTVPTYE-MVEAVCAIPPGSAFDSFLSSYNQQTIK- 257
G L+S RDK + +WD+ C +T+ ++ V V G F LS + +T++
Sbjct: 308 GPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVL-FHSGGKF--ILSCADDKTLRV 364
Query: 258 ---KKRRSLEI-----HFIT 269
K +R ++ HF+T
Sbjct: 365 WDYKNKRCMKTLNAHEHFVT 384
Score = 63 (27.2 bits), Expect = 1.9e-11, Sum P(2) = 1.9e-11
Identities = 15/79 (18%), Positives = 36/79 (45%)
Query: 25 LVVSSDGSFIACACGE-SINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSRE 83
+ + +G I A + +I + ++ T G + + + + D L+ S + +
Sbjct: 198 VAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQT 257
Query: 84 IRVWDLSTLKCLRSWKGHD 102
+RVW ++T +C + H+
Sbjct: 258 VRVWVVATKECKAELREHE 276
Score = 37 (18.1 bits), Expect = 7.6e-17, Sum P(2) = 7.6e-17
Identities = 7/23 (30%), Positives = 10/23 (43%)
Query: 629 GKKTEMFATGGSDALVNLWHDST 651
GK +G D + +W ST
Sbjct: 305 GKPGPFLLSGSRDKTIKMWDVST 327
>UNIPROTKB|Q9GL51 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9823 "Sus scrofa" [GO:0031965 "nuclear
membrane" evidence=IEA] [GO:0005819 "spindle" evidence=IEA]
[GO:0005815 "microtubule organizing center" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0016042 "lipid catabolic
process" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 GO:GO:0005737 GO:GO:0007399
GO:GO:0030154 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005819 InterPro:IPR019775
GO:GO:0016042 GO:GO:0006810 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005815 InterPro:IPR013720
Pfam:PF08513 GO:GO:0005874 HOGENOM:HOG000184015 HOVERGEN:HBG006271
KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 EMBL:AF319658
RefSeq:NP_999415.1 UniGene:Ssc.802 ProteinModelPortal:Q9GL51
SMR:Q9GL51 STRING:Q9GL51 PRIDE:Q9GL51 GeneID:397482 KEGG:ssc:397482
Uniprot:Q9GL51
Length = 410
Score = 251 (93.4 bits), Expect = 1.4e-18, P = 1.4e-18
Identities = 63/236 (26%), Positives = 104/236 (44%)
Query: 53 KSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHP 112
K + G +T + P ++ S+ I+VWD T R+ KGH ++
Sbjct: 101 KYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDH 160
Query: 113 SGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRV 172
SG LLA+ AD + +WD G C GH VSS+ P+ D + S + D T+++
Sbjct: 161 SGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDH--IVSAARDKTIKM 218
Query: 173 WDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYEMV 232
W++ CV T H V + DG+ + S D+ V +W + CK + +E V
Sbjct: 219 WEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHV 278
Query: 233 EAVCAIPPGSAFDSFLSSYNQQTIKKKRRSLEIHFITVGERG-IVRMWNADSA-CL 286
+ P S++ S + +T K + F+ G R ++MW+ + CL
Sbjct: 279 VECISWAPESSYSSISEATGSETKKSGKPG---PFLLSGSRDKTIKMWDVSTGMCL 331
Score = 239 (89.2 bits), Expect = 1.2e-19, Sum P(2) = 1.2e-19
Identities = 46/147 (31%), Positives = 79/147 (53%)
Query: 41 SINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKG 100
+I + D + T++G +D++ ++ KLL S I++WD +C+R+ G
Sbjct: 131 TIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHG 190
Query: 101 HDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSL 160
HD +A P+G + +A D+ + +W+V G+C F GH+ V + P+ D +L
Sbjct: 191 HDHNVSSVAIMPNGDHIVSAARDKTIKMWEVQTGYCVKTFTGHREWVRMV--RPNQDGTL 248
Query: 161 LFSGSDDATVRVWDLLAKKCVATLDKH 187
+ S S+D TVRVW + K+C A L +H
Sbjct: 249 IASCSNDQTVRVWVVATKECKAELREH 275
Score = 237 (88.5 bits), Expect = 1.7e-16, Sum P(2) = 1.7e-16
Identities = 64/205 (31%), Positives = 92/205 (44%)
Query: 438 TGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDI 497
+GH V V F + +VS S D TIKVW ++ + D E+ LK H +
Sbjct: 105 SGHRSPVTRVIFHPVF-SVMVSASEDATIKVWDYE--TGDFER--TLKG------HTDSV 153
Query: 498 NSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGD 557
++ + L+ + S D T +W + T GH + SV P +++A+ D
Sbjct: 154 QDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSAARD 213
Query: 558 KTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYD 617
KTIK+W + G C+KTF GH V G I SC D V++W V T EC A
Sbjct: 214 KTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELR 273
Query: 618 KHEDKI----WALAVGKKTEMFATG 638
+HE + WA + ATG
Sbjct: 274 EHEHVVECISWAPESSYSSISEATG 298
Score = 225 (84.3 bits), Expect = 1.3e-15, P = 1.3e-15
Identities = 72/282 (25%), Positives = 121/282 (42%)
Query: 378 VQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVG 437
++V+D + L GH++ V D SGK+L + S D +++LWD + C+
Sbjct: 132 IKVWDYETGDFERTLKGHTDSVQ--DISFDHSGKLL-ASCSADMTIKLWDFQGFECIRTM 188
Query: 438 TGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVW---------SFDGLSDDAEQPMNLKAKA 488
GH V +VA + +VS + D TIK+W +F G + +
Sbjct: 189 HGHDHNVSSVAIMPN-GDHIVSAARDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGT 247
Query: 489 VVAAHGKD--INSLAVAPNDSLVCTGSQDRTA-CVWRLPDLVSVVTFRGHKRGIWSVEFS 545
++A+ D + VA + + C+ P+ S + G + +
Sbjct: 248 LIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPE--SSYSSISEATGSETKKSG 305
Query: 546 PVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLW 605
+++ S DKTIK+W +S G CL T GH + V F + G I+SC D +++W
Sbjct: 306 KPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVW 365
Query: 606 TVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLW 647
+ C+ T + HE + +L K TG D V +W
Sbjct: 366 DYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 407
Score = 215 (80.7 bits), Expect = 1.7e-14, P = 1.7e-14
Identities = 60/272 (22%), Positives = 119/272 (43%)
Query: 347 KRLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCA 406
+ L G+ + + D+ F + LA + ++++D C + GH V + A
Sbjct: 144 RTLKGHTDSVQDISF-DHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNV---SSVA 199
Query: 407 LSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTI 466
+ IV+ ++D ++++W+ ++ CV TGH V V ++ + S S+D T+
Sbjct: 200 IMPNGDHIVSAARDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQD-GTLIASCSNDQTV 258
Query: 467 KVWSFDGLSDDAE-QPMNLKAKAVVAAHGKDINSLAVAPNDS---------LVCTGSQDR 516
+VW AE + + + A +S++ A + +GS+D+
Sbjct: 259 RVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDK 318
Query: 517 TACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEG 576
T +W + + ++T GH + V F + +++ + DKT+++W + C+KT
Sbjct: 319 TIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNA 378
Query: 577 HTSSVLRASFLTRGAQIVSCGADGLVKLWTVR 608
H V F +V+ D VK+W R
Sbjct: 379 HEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
Score = 210 (79.0 bits), Expect = 6.3e-14, P = 6.3e-14
Identities = 41/161 (25%), Positives = 75/161 (46%)
Query: 487 KAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSP 546
K ++ H + + P S++ + S+D T VW T +GH + + F
Sbjct: 101 KYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDH 160
Query: 547 VDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWT 606
+++ + S D TIK+W C++T GH +V + + G IVS D +K+W
Sbjct: 161 SGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSAARDKTIKMWE 220
Query: 607 VRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLW 647
V+TG C+ T+ H + + + + + A+ +D V +W
Sbjct: 221 VQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVW 261
Score = 202 (76.2 bits), Expect = 4.9e-13, P = 4.9e-13
Identities = 44/138 (31%), Positives = 65/138 (47%)
Query: 514 QDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKT 573
Q R W +P GH+ + V F PV V+++AS D TIK+W G +T
Sbjct: 87 QKRDPKEW-IPRPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERT 145
Query: 574 FEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTE 633
+GHT SV SF G + SC AD +KLW + ECI T H+ + ++A+ +
Sbjct: 146 LKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGD 205
Query: 634 MFATGGSDALVNLWHDST 651
+ D + +W T
Sbjct: 206 HIVSAARDKTIKMWEVQT 223
Score = 170 (64.9 bits), Expect = 1.5e-11, Sum P(2) = 1.5e-11
Identities = 34/105 (32%), Positives = 53/105 (50%)
Query: 114 GGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVW 173
G L + D+ + +WDV G C GH V +LFH + + S +DD T+RVW
Sbjct: 308 GPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFH--SGGKFILSCADDKTLRVW 365
Query: 174 DLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLR 218
D K+C+ TL+ H VTS+ +++ D+ V +W+ R
Sbjct: 366 DYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
Score = 155 (59.6 bits), Expect = 8.0e-08, P = 8.0e-08
Identities = 38/133 (28%), Positives = 62/133 (46%)
Query: 42 INIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGH 101
+ + + S S+I + + T + P LL S + I++WD+ST CL + GH
Sbjct: 279 VECISWAPESSYSSISEATGSETKKSGKPGPFLL-SGSRDKTIKMWDVSTGMCLMTLVGH 337
Query: 102 DGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLL 161
D G+ H G + + D+ + VWD C H+ V+S+ FH +
Sbjct: 338 DNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAP--YV 395
Query: 162 FSGSDDATVRVWD 174
+GS D TV+VW+
Sbjct: 396 VTGSVDQTVKVWE 408
Score = 134 (52.2 bits), Expect = 2.0e-13, Sum P(2) = 2.0e-13
Identities = 32/140 (22%), Positives = 66/140 (47%)
Query: 31 GSFIA-CACGESINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWDL 89
G +A C+ +I + D T+ G ++++A+ P+ + S+ + I++W++
Sbjct: 162 GKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSAARDKTIKMWEV 221
Query: 90 STLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSS 149
T C++++ GH + + G L+A+ D+ V VW V C + H+ VV
Sbjct: 222 QTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVEC 281
Query: 150 ILFHPDTDKSLLFSGSDDAT 169
I + P++ S + + T
Sbjct: 282 ISWAPESSYSSISEATGSET 301
Score = 121 (47.7 bits), Expect = 2.0e-13, Sum P(2) = 2.0e-13
Identities = 23/70 (32%), Positives = 38/70 (54%)
Query: 161 LFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDY 220
L SGS D T+++WD+ C+ TL H + V + S G ++S DK + +WD ++
Sbjct: 311 LLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNK 370
Query: 221 SCKLTVPTYE 230
C T+ +E
Sbjct: 371 RCMKTLNAHE 380
Score = 65 (27.9 bits), Expect = 1.2e-19, Sum P(2) = 1.2e-19
Identities = 22/80 (27%), Positives = 38/80 (47%)
Query: 200 GSTLISAGRDKVVNLWDLRDYSCKLTVPTYE-MVEAVCAIPPGSAFDSFLSSYNQQTIK- 257
G L+S RDK + +WD+ C +T+ ++ V V G F LS + +T++
Sbjct: 308 GPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVL-FHSGGKF--ILSCADDKTLRV 364
Query: 258 ---KKRRSLEI-----HFIT 269
K +R ++ HF+T
Sbjct: 365 WDYKNKRCMKTLNAHEHFVT 384
Score = 64 (27.6 bits), Expect = 1.5e-11, Sum P(2) = 1.5e-11
Identities = 13/77 (16%), Positives = 36/77 (46%)
Query: 26 VVSSDGSFIACACGESINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIR 85
++ + ++ A ++I + ++ T G + + + + D L+ S + + +R
Sbjct: 200 IMPNGDHIVSAARDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVR 259
Query: 86 VWDLSTLKCLRSWKGHD 102
VW ++T +C + H+
Sbjct: 260 VWVVATKECKAELREHE 276
Score = 37 (18.1 bits), Expect = 1.0e-16, Sum P(2) = 1.0e-16
Identities = 7/23 (30%), Positives = 10/23 (43%)
Query: 629 GKKTEMFATGGSDALVNLWHDST 651
GK +G D + +W ST
Sbjct: 305 GKPGPFLLSGSRDKTIKMWDVST 327
>UNIPROTKB|Q68DS0 [details] [associations]
symbol:DKFZp781N011 "Putative uncharacterized protein
DKFZp781N011" species:9606 "Homo sapiens" [GO:0046983 "protein
dimerization activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
InterPro:IPR021977 Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
SMART:SM01028 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 EMBL:AL627424 EMBL:AL133387 EMBL:AL445463
RefSeq:NP_003930.1 RefSeq:NP_378663.1 UniGene:Hs.643802
UniGene:Hs.713753 GeneID:8945 KEGG:hsa:8945 CTD:8945 HGNC:HGNC:1144
HOVERGEN:HBG002521 KO:K03362 ChiTaRS:BTRC GenomeRNAi:8945
EMBL:CR749295 IPI:IPI01012795 RefSeq:NP_001243785.1 SMR:Q68DS0
STRING:Q68DS0 Ensembl:ENST00000393441 Uniprot:Q68DS0
Length = 564
Score = 265 (98.3 bits), Expect = 1.2e-19, P = 1.2e-19
Identities = 60/221 (27%), Positives = 115/221 (52%)
Query: 414 IVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDG 473
IV+G +DN++++WD + C + TGH G+V + + +++ +++GSSD T++VW +
Sbjct: 275 IVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQYDERV---IITGSSDSTVRVWDVN- 330
Query: 474 LSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFR 533
+ +N + H + + L N+ ++ T S+DR+ VW + + R
Sbjct: 331 ----TGEMLN-----TLIHHCEAVLHLRF--NNGMMVTCSKDRSIAVWDMASPTDITLRR 379
Query: 534 ---GHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRG 590
GH+ + V+F D+ +++ASGD+TIK+W+ S ++T GH + A R
Sbjct: 380 VLVGHRAAVNVVDFD--DKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGI--ACLQYRD 435
Query: 591 AQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKK 631
+VS +D ++LW + G C+ + HE+ + + K
Sbjct: 436 RLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNK 476
Score = 251 (93.4 bits), Expect = 4.4e-18, P = 4.4e-18
Identities = 70/244 (28%), Positives = 120/244 (49%)
Query: 413 LIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFD 472
+I+TGS D++VR+WD + + H AV + F+ + +V+ S D +I VW
Sbjct: 314 VIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNNGM---MVTCSKDRSIAVW--- 367
Query: 473 GLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTF 532
D P ++ + V+ H +N V +D + + S DRT VW V T
Sbjct: 368 ----DMASPTDITLRRVLVGHRAAVN--VVDFDDKYIVSASGDRTIKVWNTSTCEFVRTL 421
Query: 533 RGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQ 592
GHKRGI +++ D++V++ S D TI++W I G+CL+ EGH V F + +
Sbjct: 422 NGHKRGIACLQYR--DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNK--R 477
Query: 593 IVSCGADGLVKLWTV--------RTGE-CIATYDKHEDKIWALAVGKKTEMFATGGSDAL 643
IVS DG +K+W + G C+ T +H +++ L + ++ ++ D +
Sbjct: 478 IVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQFDE-FQIVSSSHDDTI 536
Query: 644 VNLW 647
+ +W
Sbjct: 537 L-IW 539
Score = 209 (78.6 bits), Expect = 1.8e-13, P = 1.8e-13
Identities = 57/213 (26%), Positives = 103/213 (48%)
Query: 29 SDGSFIACACGESINIVDLSNAS---IKSTIEGGSDTITALALSPDDKLLFSSGHSREIR 85
++G + C+ SI + D+++ + ++ + G + + DDK + S+ R I+
Sbjct: 351 NNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIK 408
Query: 86 VWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGA-DRKVLVWDVDGGFCTHYFKGHK 144
VW+ ST + +R+ GH G+AC L +G+ D + +WD++ G C +GH+
Sbjct: 409 VWNTSTCEFVRTLNGHKR---GIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHE 465
Query: 145 GVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKK---------CVATLDKHFSRVTSMA 195
+V I F D + SG+ D ++VWDL+A C+ TL +H RV +
Sbjct: 466 ELVRCIRF----DNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQ 521
Query: 196 ITSDGSTLISAGRDKVVNLWD-LRDYSCKLTVP 227
D ++S+ D + +WD L D + + P
Sbjct: 522 F--DEFQIVSSSHDDTILIWDFLNDPAAQAEPP 552
Score = 174 (66.3 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 73/284 (25%), Positives = 122/284 (42%)
Query: 248 LSSYNQQTIKK-KRRSLEIHFITVGERGIVRMWNADSACLYEQKSSDVTISF------EM 300
+S TIK + +LE I G G V D + SSD T+ EM
Sbjct: 276 VSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQYDERVIITG-SSDSTVRVWDVNTGEM 334
Query: 301 DDSKRGFTAATV-LPSNQGLLCVTADQQLLLYTTVEVPEKKMELILSKRLVGYNEEILDL 359
++ A + L N G++ + + + + P ++ L + LVG+ + +
Sbjct: 335 LNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAVWDMASPT---DITLRRVLVGHRAAVNVV 391
Query: 360 KFLGEEEQYLAVATNIEQVQVYDLSSMSCSYV--LAGHSEIVLCLDTCALSSGKILIVTG 417
F +++Y+ A+ ++V++ S+ C +V L GH + CL L+V+G
Sbjct: 392 DF---DDKYIVSASGDRTIKVWNTST--CEFVRTLNGHKRGIACLQY-----RDRLVVSG 441
Query: 418 SKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDD 477
S DN++RLWD E C+ V GH V + F K +VSG+ D IKVW D
Sbjct: 442 SSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKR---IVSGAYDGKIKVWDLVAALDP 498
Query: 478 AEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVW 521
L + +V G+ + L ++ + + S D T +W
Sbjct: 499 RAPAGTLCLRTLVEHSGR-VFRLQF--DEFQIVSSSHDDTILIW 539
Score = 164 (62.8 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 44/193 (22%), Positives = 85/193 (44%)
Query: 41 SINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKG 100
+I I D + K + G + ++ L L D++++ + +RVWD++T + L +
Sbjct: 283 TIKIWDKNTLECKRILTGHTGSV--LCLQYDERVIITGSSDSTVRVWDVNTGEMLNTLIH 340
Query: 101 HDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGF---CTHYFKGHKGVVSSILFHPDTD 157
H + + + G++ T DR + VWD+ GH+ V+ + D D
Sbjct: 341 HCEAVLHLRFN--NGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVV----DFD 394
Query: 158 KSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDL 217
+ S S D T++VW+ + V TL+ H + + ++S D + LWD+
Sbjct: 395 DKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYRD--RLVVSGSSDNTIRLWDI 452
Query: 218 RDYSCKLTVPTYE 230
+C + +E
Sbjct: 453 ECGACLRVLEGHE 465
Score = 142 (55.0 bits), Expect = 3.7e-06, P = 3.7e-06
Identities = 38/151 (25%), Positives = 69/151 (45%)
Query: 68 LSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVL 127
L DD+ + S I++WD +TL+C R GH G + + ++ T +D V
Sbjct: 268 LQYDDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQYDER--VIITGSSDSTVR 325
Query: 128 VWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKH 187
VWDV+ G + H V + F+ ++ + S D ++ VWD+ + + TL +
Sbjct: 326 VWDVNTGEMLNTLIHHCEAVLHLRFN----NGMMVTCSKDRSIAVWDMASPTDI-TLRRV 380
Query: 188 F--SRVTSMAITSDGSTLISAGRDKVVNLWD 216
R + D ++SA D+ + +W+
Sbjct: 381 LVGHRAAVNVVDFDDKYIVSASGDRTIKVWN 411
Score = 137 (53.3 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 35/150 (23%), Positives = 66/150 (44%)
Query: 505 NDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWS 564
+D + +G +D T +W L GH + +++ ++V+IT S D T+++W
Sbjct: 271 DDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQYD--ERVIITGSSDSTVRVWD 328
Query: 565 ISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIA---TYDKHED 621
++ G L T H +VL F +V+C D + +W + + I H
Sbjct: 329 VNTGEMLNTLIHHCEAVLHLRF--NNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRA 386
Query: 622 KIWALAVGKKTEMFATGGSDALVNLWHDST 651
+ + K + A+G D + +W+ ST
Sbjct: 387 AVNVVDFDDKYIVSASG--DRTIKVWNTST 414
Score = 129 (50.5 bits), Expect = 9.5e-05, P = 9.5e-05
Identities = 34/134 (25%), Positives = 65/134 (48%)
Query: 365 EEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVR 424
++Q + ++++D +++ C +L GH+ VLCL + +I+TGS D++VR
Sbjct: 271 DDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQY-----DERVIITGSSDSTVR 325
Query: 425 LWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNL 484
+WD + + H AV + F+ + +V+ S D +I VW D P ++
Sbjct: 326 VWDVNTGEMLNTLIHHCEAVLHLRFNNGM---MVTCSKDRSIAVW-------DMASPTDI 375
Query: 485 KAKAVVAAHGKDIN 498
+ V+ H +N
Sbjct: 376 TLRRVLVGHRAAVN 389
Score = 120 (47.3 bits), Expect = 0.00090, P = 0.00090
Identities = 68/304 (22%), Positives = 133/304 (43%)
Query: 199 DGSTLISAGRDKVVNLWDLRDYSCKLTVPTYEMVEAVC------AIPPGSAFDSFLSSYN 252
D ++S RD + +WD CK + T +C I GS+ DS + ++
Sbjct: 271 DDQKIVSGLRDNTIKIWDKNTLECK-RILTGHTGSVLCLQYDERVIITGSS-DSTVRVWD 328
Query: 253 QQTIKKKRRSLEIHFITV----GERGIVRMWNAD-SACLYEQKS-SDVTISFEMDDSKRG 306
T + +L H V G++ + D S +++ S +D+T+ + +
Sbjct: 329 VNT-GEMLNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHR-- 385
Query: 307 FTAATVLP-SNQGLLCVTADQQLLLYTTVEVPEKKMELILSKRLVGYNEEILDLKFLGEE 365
A V+ ++ ++ + D+ + ++ T E + + L G+ I L++
Sbjct: 386 -AAVNVVDFDDKYIVSASGDRTIKVWNT-----STCEFV--RTLNGHKRGIACLQY---R 434
Query: 366 EQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRL 425
++ + ++ ++++D+ +C VL GH E+V C+ + +I V+G+ D +++
Sbjct: 435 DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCI---RFDNKRI--VSGAYDGKIKV 489
Query: 426 WDS----ESRC-----CVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSD 476
WD + R C+ H G V + F + Q +VS S D TI +W F L+D
Sbjct: 490 WDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQFDE-FQ--IVSSSHDDTILIWDF--LND 544
Query: 477 DAEQ 480
A Q
Sbjct: 545 PAAQ 548
>UNIPROTKB|F1MVN1 [details] [associations]
symbol:BTRC "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071407 "cellular response to organic cyclic compound"
evidence=IEA] [GO:0061136 "regulation of proteasomal protein
catabolic process" evidence=IEA] [GO:0060444 "branching involved in
mammary gland duct morphogenesis" evidence=IEA] [GO:0051726
"regulation of cell cycle" evidence=IEA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0045862 "positive regulation of proteolysis"
evidence=IEA] [GO:0045309 "protein phosphorylated amino acid
binding" evidence=IEA] [GO:0043122 "regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=IEA] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IEA] [GO:0033598 "mammary
gland epithelial cell proliferation" evidence=IEA] [GO:0031648
"protein destabilization" evidence=IEA] [GO:0019005 "SCF ubiquitin
ligase complex" evidence=IEA] [GO:0008013 "beta-catenin binding"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0006470 "protein dephosphorylation"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
GO:GO:0045892 GO:GO:0045893 GO:GO:0006470 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0051726
GO:GO:0006511 GO:GO:0019005 GO:GO:0045862 GO:GO:0000209
GO:GO:0071407 GO:GO:0061136 GO:GO:0031648 GO:GO:0043122
GO:GO:0060444 GO:GO:0033598 GO:GO:0042753 OMA:NAYLKPM
GeneTree:ENSGT00690000101849 EMBL:DAAA02058986 EMBL:DAAA02058987
EMBL:DAAA02058988 EMBL:DAAA02058989 EMBL:DAAA02058990
EMBL:DAAA02058991 IPI:IPI00717164 UniGene:Bt.25271
Ensembl:ENSBTAT00000009830 Uniprot:F1MVN1
Length = 569
Score = 265 (98.3 bits), Expect = 1.3e-19, P = 1.3e-19
Identities = 60/221 (27%), Positives = 115/221 (52%)
Query: 414 IVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDG 473
IV+G +DN++++WD + C + TGH G+V + + +++ +++GSSD T++VW +
Sbjct: 280 IVSGLRDNTIKIWDKSTLECKRILTGHTGSVLCLQYDERV---IITGSSDSTVRVWDVN- 335
Query: 474 LSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFR 533
+ +N + H + + L N+ ++ T S+DR+ VW + + R
Sbjct: 336 ----TGEMLN-----TLIHHCEAVLHLRF--NNGMMVTCSKDRSIAVWDMASPTDITLRR 384
Query: 534 ---GHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRG 590
GH+ + V+F D+ +++ASGD+TIK+W+ S ++T GH + A R
Sbjct: 385 VLVGHRAAVNVVDFD--DKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGI--ACLQYRD 440
Query: 591 AQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKK 631
+VS +D ++LW + G C+ + HE+ + + K
Sbjct: 441 RLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNK 481
Score = 251 (93.4 bits), Expect = 4.5e-18, P = 4.5e-18
Identities = 70/244 (28%), Positives = 120/244 (49%)
Query: 413 LIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFD 472
+I+TGS D++VR+WD + + H AV + F+ + +V+ S D +I VW
Sbjct: 319 VIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNNGM---MVTCSKDRSIAVW--- 372
Query: 473 GLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTF 532
D P ++ + V+ H +N V +D + + S DRT VW V T
Sbjct: 373 ----DMASPTDITLRRVLVGHRAAVN--VVDFDDKYIVSASGDRTIKVWNTSTCEFVRTL 426
Query: 533 RGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQ 592
GHKRGI +++ D++V++ S D TI++W I G+CL+ EGH V F + +
Sbjct: 427 NGHKRGIACLQYR--DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNK--R 482
Query: 593 IVSCGADGLVKLWTV--------RTGE-CIATYDKHEDKIWALAVGKKTEMFATGGSDAL 643
IVS DG +K+W + G C+ T +H +++ L + ++ ++ D +
Sbjct: 483 IVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQFDE-FQIVSSSHDDTI 541
Query: 644 VNLW 647
+ +W
Sbjct: 542 L-IW 544
Score = 209 (78.6 bits), Expect = 1.8e-13, P = 1.8e-13
Identities = 57/213 (26%), Positives = 103/213 (48%)
Query: 29 SDGSFIACACGESINIVDLSNAS---IKSTIEGGSDTITALALSPDDKLLFSSGHSREIR 85
++G + C+ SI + D+++ + ++ + G + + DDK + S+ R I+
Sbjct: 356 NNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIK 413
Query: 86 VWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGA-DRKVLVWDVDGGFCTHYFKGHK 144
VW+ ST + +R+ GH G+AC L +G+ D + +WD++ G C +GH+
Sbjct: 414 VWNTSTCEFVRTLNGHKR---GIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHE 470
Query: 145 GVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKK---------CVATLDKHFSRVTSMA 195
+V I F D + SG+ D ++VWDL+A C+ TL +H RV +
Sbjct: 471 ELVRCIRF----DNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQ 526
Query: 196 ITSDGSTLISAGRDKVVNLWD-LRDYSCKLTVP 227
D ++S+ D + +WD L D + + P
Sbjct: 527 F--DEFQIVSSSHDDTILIWDFLNDPAAQAEPP 557
Score = 173 (66.0 bits), Expect = 1.6e-09, P = 1.6e-09
Identities = 74/284 (26%), Positives = 122/284 (42%)
Query: 248 LSSYNQQTIKKKRRS-LEIHFITVGERGIVRMWNADSACLYEQKSSDVTISF------EM 300
+S TIK +S LE I G G V D + SSD T+ EM
Sbjct: 281 VSGLRDNTIKIWDKSTLECKRILTGHTGSVLCLQYDERVIITG-SSDSTVRVWDVNTGEM 339
Query: 301 DDSKRGFTAATV-LPSNQGLLCVTADQQLLLYTTVEVPEKKMELILSKRLVGYNEEILDL 359
++ A + L N G++ + + + + P ++ L + LVG+ + +
Sbjct: 340 LNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAVWDMASPT---DITLRRVLVGHRAAVNVV 396
Query: 360 KFLGEEEQYLAVATNIEQVQVYDLSSMSCSYV--LAGHSEIVLCLDTCALSSGKILIVTG 417
F +++Y+ A+ ++V++ S+ C +V L GH + CL L+V+G
Sbjct: 397 DF---DDKYIVSASGDRTIKVWNTST--CEFVRTLNGHKRGIACLQY-----RDRLVVSG 446
Query: 418 SKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDD 477
S DN++RLWD E C+ V GH V + F K +VSG+ D IKVW D
Sbjct: 447 SSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKR---IVSGAYDGKIKVWDLVAALDP 503
Query: 478 AEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVW 521
L + +V G+ + L ++ + + S D T +W
Sbjct: 504 RAPAGTLCLRTLVEHSGR-VFRLQF--DEFQIVSSSHDDTILIW 544
Score = 167 (63.8 bits), Expect = 7.1e-09, P = 7.1e-09
Identities = 45/193 (23%), Positives = 85/193 (44%)
Query: 41 SINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKG 100
+I I D S K + G + ++ L L D++++ + +RVWD++T + L +
Sbjct: 288 TIKIWDKSTLECKRILTGHTGSV--LCLQYDERVIITGSSDSTVRVWDVNTGEMLNTLIH 345
Query: 101 HDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGF---CTHYFKGHKGVVSSILFHPDTD 157
H + + + G++ T DR + VWD+ GH+ V+ + D D
Sbjct: 346 HCEAVLHLRFN--NGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVV----DFD 399
Query: 158 KSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDL 217
+ S S D T++VW+ + V TL+ H + + ++S D + LWD+
Sbjct: 400 DKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYRD--RLVVSGSSDNTIRLWDI 457
Query: 218 RDYSCKLTVPTYE 230
+C + +E
Sbjct: 458 ECGACLRVLEGHE 470
Score = 145 (56.1 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 39/151 (25%), Positives = 69/151 (45%)
Query: 68 LSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVL 127
L DD+ + S I++WD STL+C R GH G + + ++ T +D V
Sbjct: 273 LQYDDQKIVSGLRDNTIKIWDKSTLECKRILTGHTGSVLCLQYDER--VIITGSSDSTVR 330
Query: 128 VWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKH 187
VWDV+ G + H V + F+ ++ + S D ++ VWD+ + + TL +
Sbjct: 331 VWDVNTGEMLNTLIHHCEAVLHLRFN----NGMMVTCSKDRSIAVWDMASPTDI-TLRRV 385
Query: 188 F--SRVTSMAITSDGSTLISAGRDKVVNLWD 216
R + D ++SA D+ + +W+
Sbjct: 386 LVGHRAAVNVVDFDDKYIVSASGDRTIKVWN 416
Score = 138 (53.6 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 35/150 (23%), Positives = 66/150 (44%)
Query: 505 NDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWS 564
+D + +G +D T +W L GH + +++ ++V+IT S D T+++W
Sbjct: 276 DDQKIVSGLRDNTIKIWDKSTLECKRILTGHTGSVLCLQYD--ERVIITGSSDSTVRVWD 333
Query: 565 ISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIA---TYDKHED 621
++ G L T H +VL F +V+C D + +W + + I H
Sbjct: 334 VNTGEMLNTLIHHCEAVLHLRF--NNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRA 391
Query: 622 KIWALAVGKKTEMFATGGSDALVNLWHDST 651
+ + K + A+G D + +W+ ST
Sbjct: 392 AVNVVDFDDKYIVSASG--DRTIKVWNTST 419
Score = 132 (51.5 bits), Expect = 4.6e-05, P = 4.6e-05
Identities = 35/134 (26%), Positives = 65/134 (48%)
Query: 365 EEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVR 424
++Q + ++++D S++ C +L GH+ VLCL + +I+TGS D++VR
Sbjct: 276 DDQKIVSGLRDNTIKIWDKSTLECKRILTGHTGSVLCLQY-----DERVIITGSSDSTVR 330
Query: 425 LWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNL 484
+WD + + H AV + F+ + +V+ S D +I VW D P ++
Sbjct: 331 VWDVNTGEMLNTLIHHCEAVLHLRFNNGM---MVTCSKDRSIAVW-------DMASPTDI 380
Query: 485 KAKAVVAAHGKDIN 498
+ V+ H +N
Sbjct: 381 TLRRVLVGHRAAVN 394
>UNIPROTKB|F1S845 [details] [associations]
symbol:TAF5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0033276 "transcription factor TFTC complex"
evidence=IEA] [GO:0015629 "actin cytoskeleton" evidence=IEA]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=IEA] [GO:0005669 "transcription factor TFIID
complex" evidence=IEA] [GO:0004402 "histone acetyltransferase
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0015629 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003700 GO:GO:0044212 GO:GO:0006367 GO:GO:0004402
GO:GO:0005669 GO:GO:0033276 GeneTree:ENSGT00700000104377
OMA:ERQNNQI ProteinModelPortal:F1S845 Ensembl:ENSSSCT00000011591
Uniprot:F1S845
Length = 542
Score = 253 (94.1 bits), Expect = 1.4e-19, Sum P(2) = 1.4e-19
Identities = 77/257 (29%), Positives = 123/257 (47%)
Query: 379 QVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVG- 437
++ D + S +L GHS V + S + +++ S+D +VRLW ++ C+ VG
Sbjct: 286 RIMDEKTASELKILYGHSGPVY---GASFSPDRNYLLSSSEDGTVRLWSLQTFTCL-VGY 341
Query: 438 TGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDI 497
GH V FS + VSG D ++W+ D QP+ + A H D+
Sbjct: 342 KGHNYPVWDTQFSP-YGYYFVSGGHDRVARLWATDHY-----QPLR-----IFAGHLADV 390
Query: 498 NSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGD 557
N PN + V TGS DRT +W + + V F GHK I S+ FSP + + T + D
Sbjct: 391 NCTRFHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATD 450
Query: 558 KTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGA-DGLVKLW-TVRTGECIAT 615
+ +W I G + +GHT +V F +R +I++ G+ D V+LW V+ E + T
Sbjct: 451 GRVLLWDIGHGLMVGELKGHTDTVCSLRF-SRDGEILASGSMDNTVRLWDAVKAFEDLET 509
Query: 616 YDKHEDKIWALAVGKKT 632
D ++ + + K T
Sbjct: 510 -DNSQELLLGTYMTKST 525
Score = 249 (92.7 bits), Expect = 3.9e-19, Sum P(2) = 3.9e-19
Identities = 61/235 (25%), Positives = 100/235 (42%)
Query: 413 LIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFD 472
LI S D R+ D ++ + + GH G V +FS +N+L+S S D T+++WS
Sbjct: 275 LIDKESDDVLERIMDEKTASELKILYGHSGPVYGASFSPD-RNYLLSSSEDGTVRLWSLQ 333
Query: 473 GLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTF 532
+ H + +P +G DR A +W + F
Sbjct: 334 TFT----------CLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIF 383
Query: 533 RGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQ 592
GH + F P V T S D+T+++W + +G+C++ F GH + +F G
Sbjct: 384 AGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRF 443
Query: 593 IVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLW 647
+ + DG V LW + G + H D + +L + E+ A+G D V LW
Sbjct: 444 LATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFSRDGEILASGSMDNTVRLW 498
Score = 240 (89.5 bits), Expect = 6.5e-17, P = 6.5e-17
Identities = 56/174 (32%), Positives = 80/174 (45%)
Query: 44 IVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDG 103
I+D AS + G S + + SPD L SS +R+W L T CL +KGH+
Sbjct: 287 IMDEKTASELKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNY 346
Query: 104 PAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFS 163
P P G + G DR +W D F GH V+ FHP+++ + +
Sbjct: 347 PVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSN--YVAT 404
Query: 164 GSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDL 217
GS D TVR+WD+L CV H + S+ + +G L + D V LWD+
Sbjct: 405 GSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDI 458
Score = 236 (88.1 bits), Expect = 1.8e-16, P = 1.8e-16
Identities = 62/206 (30%), Positives = 92/206 (44%)
Query: 16 LQQFYG-GGPLVVSS---DGSFIACACGE-SINIVDLSNASIKSTIEGGSDTITALALSP 70
L+ YG GP+ +S D +++ + + ++ + L + +G + + SP
Sbjct: 296 LKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSP 355
Query: 71 DDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWD 130
S GH R R+W + LR + GH HP+ +AT ADR V +WD
Sbjct: 356 YGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSADRTVRLWD 415
Query: 131 VDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSR 190
V G C F GHKG + S+ F P+ L +G+ D V +WD+ V L H
Sbjct: 416 VLNGNCVRIFTGHKGPIHSLTFSPNG--RFLATGATDGRVLLWDIGHGLMVGELKGHTDT 473
Query: 191 VTSMAITSDGSTLISAGRDKVVNLWD 216
V S+ + DG L S D V LWD
Sbjct: 474 VCSLRFSRDGEILASGSMDNTVRLWD 499
Score = 206 (77.6 bits), Expect = 2.5e-14, Sum P(2) = 2.5e-14
Identities = 73/317 (23%), Positives = 139/317 (43%)
Query: 287 YEQKSSDVTISFEMDDSKRGFTAATV-----LPSNQGLLCVTADQQLLLYTTVEVPEKKM 341
Y+Q + V ++ + GF +TV P + AD L+ + +V E+ M
Sbjct: 229 YQQGLTAVDVTDDSSLIAGGFADSTVRVWSVTPKKLRSVKQAADLSLIDKESDDVLERIM 288
Query: 342 -ELILS--KRLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEI 398
E S K L G++ + F + YL ++ V+++ L + +C GH+
Sbjct: 289 DEKTASELKILYGHSGPVYGASF-SPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYP 347
Query: 399 VLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLV 458
V DT S V+G D RLW ++ + + GH+ V F N++
Sbjct: 348 VW--DT-QFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPN-SNYVA 403
Query: 459 SGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTA 518
+GS+D T+++W +N + H I+SL +PN + TG+ D
Sbjct: 404 TGSADRTVRLWDV----------LNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRV 453
Query: 519 CVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIW-SISDGSCLKTFEGH 577
+W + + V +GH + S+ FS +++ + S D T+++W ++ L+T +
Sbjct: 454 LLWDIGHGLMVGELKGHTDTVCSLRFSRDGEILASGSMDNTVRLWDAVKAFEDLET--DN 511
Query: 578 TSSVLRASFLTRGAQIV 594
+ +L +++T+ +V
Sbjct: 512 SQELLLGTYMTKSTPVV 528
Score = 149 (57.5 bits), Expect = 4.6e-08, Sum P(2) = 4.6e-08
Identities = 38/153 (24%), Positives = 65/153 (42%)
Query: 495 KDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITA 554
K + S+ A + SL+ S D + + GH ++ FSP ++++
Sbjct: 262 KKLRSVKQAADLSLIDKESDDVLERIMDEKTASELKILYGHSGPVYGASFSPDRNYLLSS 321
Query: 555 SGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIA 614
S D T+++WS+ +CL ++GH V F G VS G D + +LW + +
Sbjct: 322 SEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLR 381
Query: 615 TYDKHEDKIWALAVGKKTEMFATGGSDALVNLW 647
+ H + + ATG +D V LW
Sbjct: 382 IFAGHLADVNCTRFHPNSNYVATGSADRTVRLW 414
Score = 148 (57.2 bits), Expect = 7.7e-07, P = 7.7e-07
Identities = 43/156 (27%), Positives = 68/156 (43%)
Query: 492 AHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVV 551
A+ + + ++ V + SL+ G D T VW V+ R K+ + + S +D+
Sbjct: 228 AYQQGLTAVDVTDDSSLIAGGFADSTVRVWS----VTPKKLRSVKQ---AADLSLIDK-- 278
Query: 552 ITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGE 611
S D +I S LK GH+ V ASF ++S DG V+LW+++T
Sbjct: 279 --ESDDVLERIMDEKTASELKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFT 336
Query: 612 CIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLW 647
C+ Y H +W F +GG D + LW
Sbjct: 337 CLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLW 372
Score = 127 (49.8 bits), Expect = 0.00015, P = 0.00015
Identities = 46/197 (23%), Positives = 80/197 (40%)
Query: 27 VSSDGSFIACACGES-INIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIR 85
V+ D S IA +S + + ++ ++S ++ +D ++ + DD L E R
Sbjct: 238 VTDDSSLIAGGFADSTVRVWSVTPKKLRS-VKQAAD-LSLIDKESDDVL--------E-R 286
Query: 86 VWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKG 145
+ D T L+ GH GP G + P L ++ D V +W + C +KGH
Sbjct: 287 IMDEKTASELKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNY 346
Query: 146 VVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLIS 205
V F P SG D R+W + + H + V + + + +
Sbjct: 347 PVWDTQFSPYG--YYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYVAT 404
Query: 206 AGRDKVVNLWDLRDYSC 222
D+ V LWD+ + +C
Sbjct: 405 GSADRTVRLWDVLNGNC 421
Score = 123 (48.4 bits), Expect = 0.00040, P = 0.00040
Identities = 44/158 (27%), Positives = 64/158 (40%)
Query: 63 ITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGA 122
+TA+ ++ D L+ +RVW + T K LRS K + + S +L
Sbjct: 233 LTAVDVTDDSSLIAGGFADSTVRVWSV-TPKKLRSVK--QAADLSLIDKESDDVL----- 284
Query: 123 DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVA 182
+R + D GH G V F PD ++ L S S+D TVR+W L C+
Sbjct: 285 ER---IMDEKTASELKILYGHSGPVYGASFSPD--RNYLLSSSEDGTVRLWSLQTFTCLV 339
Query: 183 TLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDY 220
H V + G +S G D+V LW Y
Sbjct: 340 GYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHY 377
Score = 57 (25.1 bits), Expect = 1.4e-19, Sum P(2) = 1.4e-19
Identities = 21/68 (30%), Positives = 33/68 (48%)
Query: 155 DTDKSLLFSGSDDATVRVW---DLLAKKCVAT-LDKHFSRVTSMAITSDGSTLISAG-RD 209
D+DK + T RV D L C T L+ + +T++ +T D S+LI+ G D
Sbjct: 193 DSDKLDKIMNMKETTKRVRLGPDCLPSICFYTFLNAYQQGLTAVDVTDD-SSLIAGGFAD 251
Query: 210 KVVNLWDL 217
V +W +
Sbjct: 252 STVRVWSV 259
Score = 40 (19.1 bits), Expect = 2.3e-17, Sum P(2) = 2.3e-17
Identities = 13/40 (32%), Positives = 20/40 (50%)
Query: 388 CSYV-LAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLW 426
C Y L + + + +D SS LI G D++VR+W
Sbjct: 221 CFYTFLNAYQQGLTAVDVTDDSS---LIAGGFADSTVRVW 257
>ZFIN|ZDB-GENE-040426-1851 [details] [associations]
symbol:wdr61 "WD repeat domain 61" species:7955
"Danio rerio" [GO:0003674 "molecular_function" evidence=ND]
[GO:0016593 "Cdc73/Paf1 complex" evidence=ISS] [GO:0035327
"transcriptionally active chromatin" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0032968 "positive regulation of
transcription elongation from RNA polymerase II promoter"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0055087 "Ski
complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-1851 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327
GO:GO:0032968 GO:GO:0016593 GO:GO:0055087 CTD:80349
HOVERGEN:HBG059813 KO:K12602 OrthoDB:EOG4VMFFW EMBL:BC062834
IPI:IPI00484493 RefSeq:NP_957147.1 UniGene:Dr.122500
ProteinModelPortal:Q6P5M2 STRING:Q6P5M2 PRIDE:Q6P5M2 DNASU:393827
GeneID:393827 KEGG:dre:393827 NextBio:20814815 Uniprot:Q6P5M2
Length = 305
Score = 243 (90.6 bits), Expect = 1.4e-19, P = 1.4e-19
Identities = 72/273 (26%), Positives = 127/273 (46%)
Query: 378 VQVYDLSS--MSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSES-RCCV 434
V+V+ S + + L GH V+ ++ +S + + S D +RLWD E+ +
Sbjct: 44 VKVWKWSDEKLELQWTLEGHQLGVVSVN---ISQNGAIAASSSLDAHIRLWDLETGKQIK 100
Query: 435 GVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHG 494
+ G + A VAFS ++ +GS H KV F S E ++ + G
Sbjct: 101 SMDAGPVDA-WTVAFSPD-SKYIATGS--HLGKVNIFGVESGKKEHSLDTR--------G 148
Query: 495 KDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITA 554
K I S+A +P+ + +G+ D ++ + + T GH I S+ FSP Q+++TA
Sbjct: 149 KFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTA 208
Query: 555 SGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIA 614
S D IKI+ + + T GH S VL +F VS +D +K+W + C+
Sbjct: 209 SDDGYIKIYDVQHANLAGTLSGHGSWVLSVAFSPDDTHFVSSSSDKSIKVWDTSSRSCVN 268
Query: 615 TYDKHEDKIWALAVGKKTEMFATGGSDALVNLW 647
T+ H+D++W++ + G D ++++
Sbjct: 269 TFFDHQDQVWSVKYNPTGSKIVSAGDDRAIHIY 301
Score = 236 (88.1 bits), Expect = 8.1e-19, P = 8.1e-19
Identities = 57/190 (30%), Positives = 93/190 (48%)
Query: 28 SSDGSFIACACG-ESINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRV 86
S D +IA +NI + + + +++ I ++A SPD K L S I +
Sbjct: 115 SPDSKYIATGSHLGKVNIFGVESGKKEHSLDTRGKFILSIAYSPDGKYLASGAIDGIINI 174
Query: 87 WDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGV 146
+D++T K L + +GH P + P LL TA D + ++DV GH
Sbjct: 175 FDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHGSW 234
Query: 147 VSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISA 206
V S+ F PD D + S S D +++VWD ++ CV T H +V S+ GS ++SA
Sbjct: 235 VLSVAFSPD-DTHFV-SSSSDKSIKVWDTSSRSCVNTFFDHQDQVWSVKYNPTGSKIVSA 292
Query: 207 GRDKVVNLWD 216
G D+ ++++D
Sbjct: 293 GDDRAIHIYD 302
Score = 220 (82.5 bits), Expect = 2.5e-16, P = 2.5e-16
Identities = 62/219 (28%), Positives = 105/219 (47%)
Query: 27 VSSDGSFIACACGES-INIVDLSNAS-IKSTIEGGSDTITALALSPDDKLLFSSGHSREI 84
+S +G+ A + ++ I + DL IKS G D T +A SPD K + + H ++
Sbjct: 72 ISQNGAIAASSSLDAHIRLWDLETGKQIKSMDAGPVDAWT-VAFSPDSKYIATGSHLGKV 130
Query: 85 RVWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHK 144
++ + + K S + +A P G LA+ D + ++D+ G H +GH
Sbjct: 131 NIFGVESGKKEHSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHA 190
Query: 145 GVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLI 204
+ S+ F PD+ LL + SDD ++++D+ TL H S V S+A + D + +
Sbjct: 191 MPIRSLTFSPDSQ--LLVTASDDGYIKIYDVQHANLAGTLSGHGSWVLSVAFSPDDTHFV 248
Query: 205 SAGRDKVVNLWDLRDYSCKLTVPTYE-MVEAVCAIPPGS 242
S+ DK + +WD SC T ++ V +V P GS
Sbjct: 249 SSSSDKSIKVWDTSSRSCVNTFFDHQDQVWSVKYNPTGS 287
Score = 184 (69.8 bits), Expect = 1.7e-11, P = 1.7e-11
Identities = 39/151 (25%), Positives = 73/151 (48%)
Query: 25 LVVSSDGSFIACACGESI-NIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSRE 83
+ S DG ++A + I NI D++ + T+EG + I +L SPD +LL ++
Sbjct: 154 IAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGY 213
Query: 84 IRVWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGH 143
I+++D+ + GH + +A P ++ +D+ + VWD C + F H
Sbjct: 214 IKIYDVQHANLAGTLSGHGSWVLSVAFSPDDTHFVSSSSDKSIKVWDTSSRSCVNTFFDH 273
Query: 144 KGVVSSILFHPDTDKSLLFSGSDDATVRVWD 174
+ V S+ ++P K + S DD + ++D
Sbjct: 274 QDQVWSVKYNPTGSK--IVSAGDDRAIHIYD 302
Score = 172 (65.6 bits), Expect = 4.3e-10, P = 4.3e-10
Identities = 51/203 (25%), Positives = 92/203 (45%)
Query: 55 TIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPSG 114
T+EG + ++ +S + + SS IR+WDL T K ++S A +A P
Sbjct: 59 TLEGHQLGVVSVNISQNGAIAASSSLDAHIRLWDLETGKQIKSMDAGPVDAWTVAFSPDS 118
Query: 115 GLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWD 174
+AT KV ++ V+ G H + SI + PD L SG+ D + ++D
Sbjct: 119 KYIATGSHLGKVNIFGVESGKKEHSLDTRGKFILSIAYSPDG--KYLASGAIDGIINIFD 176
Query: 175 LLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYEMVEA 234
+ K + TL+ H + S+ + D L++A D + ++D++ + T+ +
Sbjct: 177 IATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHGSWVL 236
Query: 235 VCAIPPGSAFDSFLSSYNQQTIK 257
A P F+SS + ++IK
Sbjct: 237 SVAFSPDDTH--FVSSSSDKSIK 257
Score = 170 (64.9 bits), Expect = 3.2e-10, Sum P(2) = 3.2e-10
Identities = 50/200 (25%), Positives = 97/200 (48%)
Query: 365 EEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALS-SGKILIVTGSKDNSV 423
+ +Y+A +++ +V ++ + S + L + +L + A S GK L +G+ D +
Sbjct: 117 DSKYIATGSHLGKVNIFGVESGKKEHSLDTRGKFILSI---AYSPDGKYL-ASGAIDGII 172
Query: 424 RLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMN 483
++D + + GH + ++ FS Q LV+ S D IK++ Q N
Sbjct: 173 NIFDIATGKLLHTLEGHAMPIRSLTFSPDSQ-LLVTASDDGYIKIYDV--------QHAN 223
Query: 484 LKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVE 543
L ++ HG + S+A +P+D+ + S D++ VW V TF H+ +WSV+
Sbjct: 224 LAG--TLSGHGSWVLSVAFSPDDTHFVSSSSDKSIKVWDTSSRSCVNTFFDHQDQVWSVK 281
Query: 544 FSPVDQVVITASGDKTIKIW 563
++P +++A D+ I I+
Sbjct: 282 YNPTGSKIVSAGDDRAIHIY 301
Score = 166 (63.5 bits), Expect = 2.1e-09, P = 2.1e-09
Identities = 60/246 (24%), Positives = 107/246 (43%)
Query: 410 GKILIVTGSKDNSVRLWD-SESRCCVG-VGTGHMGAVGAVAFSKKLQNFLVSGSS--DHT 465
G IVTGS D+ V++W S+ + + GH V +V S QN ++ SS D
Sbjct: 31 GSETIVTGSLDDLVKVWKWSDEKLELQWTLEGHQLGVVSVNIS---QNGAIAASSSLDAH 87
Query: 466 IKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPD 525
I++W D E +K+ + A D ++A +P+ + TGS ++ +
Sbjct: 88 IRLW-------DLETGKQIKS---MDAGPVDAWTVAFSPDSKYIATGSHLGKVNIFGVES 137
Query: 526 LVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRAS 585
+ + I S+ +SP + + + + D I I+ I+ G L T EGH + +
Sbjct: 138 GKKEHSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLT 197
Query: 586 FLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVN 645
F +V+ DG +K++ V+ T H + ++A F + SD +
Sbjct: 198 FSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHGSWVLSVAFSPDDTHFVSSSSDKSIK 257
Query: 646 LWHDST 651
+W S+
Sbjct: 258 VWDTSS 263
Score = 136 (52.9 bits), Expect = 5.2e-06, P = 5.2e-06
Identities = 35/119 (29%), Positives = 56/119 (47%)
Query: 535 HKRGIWSVEF--SPVD--QVVITASGDKTIKIWSISDGSC-LK-TFEGHTSSVLRASFLT 588
H+ IW+ + S D + ++T S D +K+W SD L+ T EGH V+ +
Sbjct: 15 HEDAIWTAAWGRSEKDGSETIVTGSLDDLVKVWKWSDEKLELQWTLEGHQLGVVSVNISQ 74
Query: 589 RGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLW 647
GA S D ++LW + TG+ I + D W +A ++ ATG VN++
Sbjct: 75 NGAIAASSSLDAHIRLWDLETGKQIKSMDAGPVDAWTVAFSPDSKYIATGSHLGKVNIF 133
Score = 128 (50.1 bits), Expect = 9.6e-13, Sum P(2) = 9.6e-13
Identities = 34/121 (28%), Positives = 57/121 (47%)
Query: 349 LVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALS 408
L G+ I L F + Q L A++ +++YD+ + + L+GH VL + A S
Sbjct: 186 LEGHAMPIRSLTF-SPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHGSWVLSV---AFS 241
Query: 409 SGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKV 468
V+ S D S+++WD+ SR CV H V +V ++ +VS D I +
Sbjct: 242 PDDTHFVSSSSDKSIKVWDTSSRSCVNTFFDHQDQVWSVKYNPTGSK-IVSAGDDRAIHI 300
Query: 469 W 469
+
Sbjct: 301 Y 301
Score = 121 (47.7 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 35/114 (30%), Positives = 58/114 (50%)
Query: 356 ILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIV 415
IL + + + +YLA + ++D+++ + L GH+ + L S L+V
Sbjct: 151 ILSIAY-SPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSL---TFSPDSQLLV 206
Query: 416 TGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVW 469
T S D ++++D + G +GH V +VAFS +F VS SSD +IKVW
Sbjct: 207 TASDDGYIKIYDVQHANLAGTLSGHGSWVLSVAFSPDDTHF-VSSSSDKSIKVW 259
Score = 116 (45.9 bits), Expect = 9.6e-13, Sum P(2) = 9.6e-13
Identities = 31/136 (22%), Positives = 62/136 (45%)
Query: 84 IRVWDLSTLKCLRSW--KGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFK 141
++VW S K W +GH + + +G + A++ D + +WD++ G
Sbjct: 44 VKVWKWSDEKLELQWTLEGHQLGVVSVNISQNGAIAASSSLDAHIRLWDLETGKQIKSMD 103
Query: 142 GHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGS 201
++ F PD+ + +GS V ++ + + K +LD + S+A + DG
Sbjct: 104 AGPVDAWTVAFSPDS--KYIATGSHLGKVNIFGVESGKKEHSLDTRGKFILSIAYSPDGK 161
Query: 202 TLISAGRDKVVNLWDL 217
L S D ++N++D+
Sbjct: 162 YLASGAIDGIINIFDI 177
Score = 44 (20.5 bits), Expect = 3.2e-10, Sum P(2) = 3.2e-10
Identities = 18/69 (26%), Positives = 36/69 (52%)
Query: 199 DGS-TLISAGRDKVVNLWDLRDYSCKL--TVPTYEM-VEAVC-----AIPPGSAFDSFLS 249
DGS T+++ D +V +W D +L T+ +++ V +V AI S+ D+ +
Sbjct: 30 DGSETIVTGSLDDLVKVWKWSDEKLELQWTLEGHQLGVVSVNISQNGAIAASSSLDAHIR 89
Query: 250 SYNQQTIKK 258
++ +T K+
Sbjct: 90 LWDLETGKQ 98
>UNIPROTKB|Q9Y297 [details] [associations]
symbol:BTRC "F-box/WD repeat-containing protein 1A"
species:9606 "Homo sapiens" [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0016055 "Wnt receptor signaling
pathway" evidence=IEA] [GO:0019048 "virus-host interaction"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0006470 "protein dephosphorylation" evidence=IEA]
[GO:0008013 "beta-catenin binding" evidence=IEA] [GO:0033598
"mammary gland epithelial cell proliferation" evidence=IEA]
[GO:0042753 "positive regulation of circadian rhythm" evidence=IEA]
[GO:0043122 "regulation of I-kappaB kinase/NF-kappaB cascade"
evidence=IEA] [GO:0045309 "protein phosphorylated amino acid
binding" evidence=IEA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0051726 "regulation
of cell cycle" evidence=IEA] [GO:0060444 "branching involved in
mammary gland duct morphogenesis" evidence=IEA] [GO:0061136
"regulation of proteasomal protein catabolic process" evidence=IEA]
[GO:0071407 "cellular response to organic cyclic compound"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IDA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IDA]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IDA]
[GO:0031648 "protein destabilization" evidence=IMP] [GO:0016567
"protein ubiquitination" evidence=IDA] [GO:0045862 "positive
regulation of proteolysis" evidence=IMP] [GO:0007165 "signal
transduction" evidence=TAS] [GO:0000278 "mitotic cell cycle"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0016032
"viral reproduction" evidence=TAS] [GO:0031145 "anaphase-promoting
complex-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=TAS] [GO:0051437 "positive regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0051439 "regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0043433
"negative regulation of sequence-specific DNA binding transcription
factor activity" evidence=TAS] [GO:0045879 "negative regulation of
smoothened signaling pathway" evidence=TAS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
InterPro:IPR021977 Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
SMART:SM01028 UniPathway:UPA00143 GO:GO:0005829 GO:GO:0005634
Reactome:REACT_111102 Reactome:REACT_116125 Reactome:REACT_6900
GO:GO:0045892 Reactome:REACT_115566 GO:GO:0019048 GO:GO:0007165
GO:GO:0045893 GO:GO:0016032 GO:GO:0006470 GO:GO:0016055
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016874 EMBL:CH471066 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0016567
GO:GO:0051726 GO:GO:0043433 GO:GO:0019005 GO:GO:0045862
GO:GO:0000209 GO:GO:0031145 GO:GO:0051437 GO:GO:0071407
Reactome:REACT_24941 GO:GO:0061136 GO:GO:0031648 GO:GO:0043122
GO:GO:0060444 GO:GO:0033598 GO:GO:0045879 GO:GO:0042753 PDB:1P22
PDBsum:1P22 EMBL:AL627424 EMBL:AF101784 EMBL:Y14153 EMBL:AF129530
EMBL:GU727631 EMBL:AK313353 EMBL:AL133387 EMBL:AL445463
EMBL:BC027994 IPI:IPI00307418 IPI:IPI00413142 RefSeq:NP_003930.1
RefSeq:NP_378663.1 UniGene:Hs.643802 UniGene:Hs.713753 PDB:2P64
PDBsum:2P64 ProteinModelPortal:Q9Y297 SMR:Q9Y297 DIP:DIP-31607N
IntAct:Q9Y297 MINT:MINT-108636 STRING:Q9Y297 PhosphoSite:Q9Y297
DMDM:13124271 PRIDE:Q9Y297 DNASU:8945 Ensembl:ENST00000370187
Ensembl:ENST00000408038 GeneID:8945 KEGG:hsa:8945 UCSC:uc001kta.3
UCSC:uc001ktb.3 CTD:8945 GeneCards:GC10P103103 HGNC:HGNC:1144
HPA:CAB032986 MIM:603482 neXtProt:NX_Q9Y297 PharmGKB:PA25465
HOGENOM:HOG000006638 HOVERGEN:HBG002521 InParanoid:Q9Y297 KO:K03362
OMA:NAYLKPM OrthoDB:EOG4F1X2M PhylomeDB:Q9Y297 ChiTaRS:BTRC
EvolutionaryTrace:Q9Y297 GenomeRNAi:8945 NextBio:33645
ArrayExpress:Q9Y297 Bgee:Q9Y297 CleanEx:HS_BTRC
Genevestigator:Q9Y297 Uniprot:Q9Y297
Length = 605
Score = 265 (98.3 bits), Expect = 1.5e-19, P = 1.5e-19
Identities = 60/221 (27%), Positives = 115/221 (52%)
Query: 414 IVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDG 473
IV+G +DN++++WD + C + TGH G+V + + +++ +++GSSD T++VW +
Sbjct: 316 IVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQYDERV---IITGSSDSTVRVWDVN- 371
Query: 474 LSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFR 533
+ +N + H + + L N+ ++ T S+DR+ VW + + R
Sbjct: 372 ----TGEMLN-----TLIHHCEAVLHLRF--NNGMMVTCSKDRSIAVWDMASPTDITLRR 420
Query: 534 ---GHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRG 590
GH+ + V+F D+ +++ASGD+TIK+W+ S ++T GH + A R
Sbjct: 421 VLVGHRAAVNVVDFD--DKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGI--ACLQYRD 476
Query: 591 AQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKK 631
+VS +D ++LW + G C+ + HE+ + + K
Sbjct: 477 RLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNK 517
Score = 251 (93.4 bits), Expect = 5.2e-18, P = 5.2e-18
Identities = 70/244 (28%), Positives = 120/244 (49%)
Query: 413 LIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFD 472
+I+TGS D++VR+WD + + H AV + F+ + +V+ S D +I VW
Sbjct: 355 VIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNNGM---MVTCSKDRSIAVW--- 408
Query: 473 GLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTF 532
D P ++ + V+ H +N V +D + + S DRT VW V T
Sbjct: 409 ----DMASPTDITLRRVLVGHRAAVN--VVDFDDKYIVSASGDRTIKVWNTSTCEFVRTL 462
Query: 533 RGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQ 592
GHKRGI +++ D++V++ S D TI++W I G+CL+ EGH V F + +
Sbjct: 463 NGHKRGIACLQYR--DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNK--R 518
Query: 593 IVSCGADGLVKLWTV--------RTGE-CIATYDKHEDKIWALAVGKKTEMFATGGSDAL 643
IVS DG +K+W + G C+ T +H +++ L + ++ ++ D +
Sbjct: 519 IVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQFDE-FQIVSSSHDDTI 577
Query: 644 VNLW 647
+ +W
Sbjct: 578 L-IW 580
Score = 209 (78.6 bits), Expect = 2.1e-13, P = 2.1e-13
Identities = 57/213 (26%), Positives = 103/213 (48%)
Query: 29 SDGSFIACACGESINIVDLSNAS---IKSTIEGGSDTITALALSPDDKLLFSSGHSREIR 85
++G + C+ SI + D+++ + ++ + G + + DDK + S+ R I+
Sbjct: 392 NNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIK 449
Query: 86 VWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGA-DRKVLVWDVDGGFCTHYFKGHK 144
VW+ ST + +R+ GH G+AC L +G+ D + +WD++ G C +GH+
Sbjct: 450 VWNTSTCEFVRTLNGHKR---GIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHE 506
Query: 145 GVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKK---------CVATLDKHFSRVTSMA 195
+V I F D + SG+ D ++VWDL+A C+ TL +H RV +
Sbjct: 507 ELVRCIRF----DNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQ 562
Query: 196 ITSDGSTLISAGRDKVVNLWD-LRDYSCKLTVP 227
D ++S+ D + +WD L D + + P
Sbjct: 563 F--DEFQIVSSSHDDTILIWDFLNDPAAQAEPP 593
Score = 174 (66.3 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 73/284 (25%), Positives = 122/284 (42%)
Query: 248 LSSYNQQTIKK-KRRSLEIHFITVGERGIVRMWNADSACLYEQKSSDVTISF------EM 300
+S TIK + +LE I G G V D + SSD T+ EM
Sbjct: 317 VSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQYDERVIITG-SSDSTVRVWDVNTGEM 375
Query: 301 DDSKRGFTAATV-LPSNQGLLCVTADQQLLLYTTVEVPEKKMELILSKRLVGYNEEILDL 359
++ A + L N G++ + + + + P ++ L + LVG+ + +
Sbjct: 376 LNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAVWDMASPT---DITLRRVLVGHRAAVNVV 432
Query: 360 KFLGEEEQYLAVATNIEQVQVYDLSSMSCSYV--LAGHSEIVLCLDTCALSSGKILIVTG 417
F +++Y+ A+ ++V++ S+ C +V L GH + CL L+V+G
Sbjct: 433 DF---DDKYIVSASGDRTIKVWNTST--CEFVRTLNGHKRGIACLQY-----RDRLVVSG 482
Query: 418 SKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDD 477
S DN++RLWD E C+ V GH V + F K +VSG+ D IKVW D
Sbjct: 483 SSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKR---IVSGAYDGKIKVWDLVAALDP 539
Query: 478 AEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVW 521
L + +V G+ + L ++ + + S D T +W
Sbjct: 540 RAPAGTLCLRTLVEHSGR-VFRLQF--DEFQIVSSSHDDTILIW 580
Score = 164 (62.8 bits), Expect = 1.7e-08, P = 1.7e-08
Identities = 44/193 (22%), Positives = 85/193 (44%)
Query: 41 SINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKG 100
+I I D + K + G + ++ L L D++++ + +RVWD++T + L +
Sbjct: 324 TIKIWDKNTLECKRILTGHTGSV--LCLQYDERVIITGSSDSTVRVWDVNTGEMLNTLIH 381
Query: 101 HDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGF---CTHYFKGHKGVVSSILFHPDTD 157
H + + + G++ T DR + VWD+ GH+ V+ + D D
Sbjct: 382 HCEAVLHLRFN--NGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVV----DFD 435
Query: 158 KSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDL 217
+ S S D T++VW+ + V TL+ H + + ++S D + LWD+
Sbjct: 436 DKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYRD--RLVVSGSSDNTIRLWDI 493
Query: 218 RDYSCKLTVPTYE 230
+C + +E
Sbjct: 494 ECGACLRVLEGHE 506
Score = 142 (55.0 bits), Expect = 4.1e-06, P = 4.1e-06
Identities = 38/151 (25%), Positives = 69/151 (45%)
Query: 68 LSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVL 127
L DD+ + S I++WD +TL+C R GH G + + ++ T +D V
Sbjct: 309 LQYDDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQYDER--VIITGSSDSTVR 366
Query: 128 VWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKH 187
VWDV+ G + H V + F+ ++ + S D ++ VWD+ + + TL +
Sbjct: 367 VWDVNTGEMLNTLIHHCEAVLHLRFN----NGMMVTCSKDRSIAVWDMASPTDI-TLRRV 421
Query: 188 F--SRVTSMAITSDGSTLISAGRDKVVNLWD 216
R + D ++SA D+ + +W+
Sbjct: 422 LVGHRAAVNVVDFDDKYIVSASGDRTIKVWN 452
Score = 137 (53.3 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 35/150 (23%), Positives = 66/150 (44%)
Query: 505 NDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWS 564
+D + +G +D T +W L GH + +++ ++V+IT S D T+++W
Sbjct: 312 DDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQYD--ERVIITGSSDSTVRVWD 369
Query: 565 ISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIA---TYDKHED 621
++ G L T H +VL F +V+C D + +W + + I H
Sbjct: 370 VNTGEMLNTLIHHCEAVLHLRF--NNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRA 427
Query: 622 KIWALAVGKKTEMFATGGSDALVNLWHDST 651
+ + K + A+G D + +W+ ST
Sbjct: 428 AVNVVDFDDKYIVSASG--DRTIKVWNTST 455
Score = 129 (50.5 bits), Expect = 0.00011, P = 0.00011
Identities = 34/134 (25%), Positives = 65/134 (48%)
Query: 365 EEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVR 424
++Q + ++++D +++ C +L GH+ VLCL + +I+TGS D++VR
Sbjct: 312 DDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQY-----DERVIITGSSDSTVR 366
Query: 425 LWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNL 484
+WD + + H AV + F+ + +V+ S D +I VW D P ++
Sbjct: 367 VWDVNTGEMLNTLIHHCEAVLHLRFNNGM---MVTCSKDRSIAVW-------DMASPTDI 416
Query: 485 KAKAVVAAHGKDIN 498
+ V+ H +N
Sbjct: 417 TLRRVLVGHRAAVN 430
Score = 120 (47.3 bits), Expect = 0.00099, P = 0.00099
Identities = 68/304 (22%), Positives = 133/304 (43%)
Query: 199 DGSTLISAGRDKVVNLWDLRDYSCKLTVPTYEMVEAVC------AIPPGSAFDSFLSSYN 252
D ++S RD + +WD CK + T +C I GS+ DS + ++
Sbjct: 312 DDQKIVSGLRDNTIKIWDKNTLECK-RILTGHTGSVLCLQYDERVIITGSS-DSTVRVWD 369
Query: 253 QQTIKKKRRSLEIHFITV----GERGIVRMWNAD-SACLYEQKS-SDVTISFEMDDSKRG 306
T + +L H V G++ + D S +++ S +D+T+ + +
Sbjct: 370 VNT-GEMLNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHR-- 426
Query: 307 FTAATVLP-SNQGLLCVTADQQLLLYTTVEVPEKKMELILSKRLVGYNEEILDLKFLGEE 365
A V+ ++ ++ + D+ + ++ T E + + L G+ I L++
Sbjct: 427 -AAVNVVDFDDKYIVSASGDRTIKVWNT-----STCEFV--RTLNGHKRGIACLQY---R 475
Query: 366 EQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRL 425
++ + ++ ++++D+ +C VL GH E+V C+ + +I V+G+ D +++
Sbjct: 476 DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCI---RFDNKRI--VSGAYDGKIKV 530
Query: 426 WDS----ESRC-----CVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSD 476
WD + R C+ H G V + F + Q +VS S D TI +W F L+D
Sbjct: 531 WDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQFDE-FQ--IVSSSHDDTILIWDF--LND 585
Query: 477 DAEQ 480
A Q
Sbjct: 586 PAAQ 589
>UNIPROTKB|E2RDC4 [details] [associations]
symbol:BTRC "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071407 "cellular response to organic cyclic
compound" evidence=IEA] [GO:0061136 "regulation of proteasomal
protein catabolic process" evidence=IEA] [GO:0060444 "branching
involved in mammary gland duct morphogenesis" evidence=IEA]
[GO:0051726 "regulation of cell cycle" evidence=IEA] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0045862 "positive regulation of proteolysis"
evidence=IEA] [GO:0045309 "protein phosphorylated amino acid
binding" evidence=IEA] [GO:0043122 "regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=IEA] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IEA] [GO:0033598 "mammary
gland epithelial cell proliferation" evidence=IEA] [GO:0031648
"protein destabilization" evidence=IEA] [GO:0019005 "SCF ubiquitin
ligase complex" evidence=IEA] [GO:0008013 "beta-catenin binding"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0006470 "protein dephosphorylation"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
GO:GO:0045892 GO:GO:0045893 GO:GO:0006470 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0051726
GO:GO:0006511 GO:GO:0019005 GO:GO:0045862 GO:GO:0000209
GO:GO:0071407 GO:GO:0061136 GO:GO:0031648 GO:GO:0043122
GO:GO:0060444 GO:GO:0033598 GO:GO:0042753 CTD:8945 KO:K03362
OMA:NAYLKPM GeneTree:ENSGT00690000101849 EMBL:AAEX03015480
EMBL:AAEX03015479 RefSeq:XP_543980.3 ProteinModelPortal:E2RDC4
Ensembl:ENSCAFT00000015696 GeneID:486851 KEGG:cfa:486851
NextBio:20860562 Uniprot:E2RDC4
Length = 605
Score = 265 (98.3 bits), Expect = 1.5e-19, P = 1.5e-19
Identities = 60/221 (27%), Positives = 115/221 (52%)
Query: 414 IVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDG 473
IV+G +DN++++WD + C + TGH G+V + + +++ +++GSSD T++VW +
Sbjct: 316 IVSGLRDNTIKIWDKSTLECKRILTGHTGSVLCLQYDERV---IITGSSDSTVRVWDVN- 371
Query: 474 LSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFR 533
+ +N + H + + L N+ ++ T S+DR+ VW + + R
Sbjct: 372 ----TGEMLN-----TLIHHCEAVLHLRF--NNGMMVTCSKDRSIAVWDMASPTDITLRR 420
Query: 534 ---GHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRG 590
GH+ + V+F D+ +++ASGD+TIK+W+ S ++T GH + A R
Sbjct: 421 VLVGHRAAVNVVDFD--DKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGI--ACLQYRD 476
Query: 591 AQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKK 631
+VS +D ++LW + G C+ + HE+ + + K
Sbjct: 477 RLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNK 517
Score = 251 (93.4 bits), Expect = 5.2e-18, P = 5.2e-18
Identities = 70/244 (28%), Positives = 120/244 (49%)
Query: 413 LIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFD 472
+I+TGS D++VR+WD + + H AV + F+ + +V+ S D +I VW
Sbjct: 355 VIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNNGM---MVTCSKDRSIAVW--- 408
Query: 473 GLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTF 532
D P ++ + V+ H +N V +D + + S DRT VW V T
Sbjct: 409 ----DMASPTDITLRRVLVGHRAAVN--VVDFDDKYIVSASGDRTIKVWNTSTCEFVRTL 462
Query: 533 RGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQ 592
GHKRGI +++ D++V++ S D TI++W I G+CL+ EGH V F + +
Sbjct: 463 NGHKRGIACLQYR--DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNK--R 518
Query: 593 IVSCGADGLVKLWTV--------RTGE-CIATYDKHEDKIWALAVGKKTEMFATGGSDAL 643
IVS DG +K+W + G C+ T +H +++ L + ++ ++ D +
Sbjct: 519 IVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQFDE-FQIVSSSHDDTI 577
Query: 644 VNLW 647
+ +W
Sbjct: 578 L-IW 580
Score = 209 (78.6 bits), Expect = 2.1e-13, P = 2.1e-13
Identities = 57/213 (26%), Positives = 103/213 (48%)
Query: 29 SDGSFIACACGESINIVDLSNAS---IKSTIEGGSDTITALALSPDDKLLFSSGHSREIR 85
++G + C+ SI + D+++ + ++ + G + + DDK + S+ R I+
Sbjct: 392 NNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIK 449
Query: 86 VWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGA-DRKVLVWDVDGGFCTHYFKGHK 144
VW+ ST + +R+ GH G+AC L +G+ D + +WD++ G C +GH+
Sbjct: 450 VWNTSTCEFVRTLNGHKR---GIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHE 506
Query: 145 GVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKK---------CVATLDKHFSRVTSMA 195
+V I F D + SG+ D ++VWDL+A C+ TL +H RV +
Sbjct: 507 ELVRCIRF----DNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQ 562
Query: 196 ITSDGSTLISAGRDKVVNLWD-LRDYSCKLTVP 227
D ++S+ D + +WD L D + + P
Sbjct: 563 F--DEFQIVSSSHDDTILIWDFLNDPAAQAEPP 593
Score = 173 (66.0 bits), Expect = 1.7e-09, P = 1.7e-09
Identities = 74/284 (26%), Positives = 122/284 (42%)
Query: 248 LSSYNQQTIKKKRRS-LEIHFITVGERGIVRMWNADSACLYEQKSSDVTISF------EM 300
+S TIK +S LE I G G V D + SSD T+ EM
Sbjct: 317 VSGLRDNTIKIWDKSTLECKRILTGHTGSVLCLQYDERVIITG-SSDSTVRVWDVNTGEM 375
Query: 301 DDSKRGFTAATV-LPSNQGLLCVTADQQLLLYTTVEVPEKKMELILSKRLVGYNEEILDL 359
++ A + L N G++ + + + + P ++ L + LVG+ + +
Sbjct: 376 LNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAVWDMASPT---DITLRRVLVGHRAAVNVV 432
Query: 360 KFLGEEEQYLAVATNIEQVQVYDLSSMSCSYV--LAGHSEIVLCLDTCALSSGKILIVTG 417
F +++Y+ A+ ++V++ S+ C +V L GH + CL L+V+G
Sbjct: 433 DF---DDKYIVSASGDRTIKVWNTST--CEFVRTLNGHKRGIACLQY-----RDRLVVSG 482
Query: 418 SKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDD 477
S DN++RLWD E C+ V GH V + F K +VSG+ D IKVW D
Sbjct: 483 SSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKR---IVSGAYDGKIKVWDLVAALDP 539
Query: 478 AEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVW 521
L + +V G+ + L ++ + + S D T +W
Sbjct: 540 RAPAGTLCLRTLVEHSGR-VFRLQF--DEFQIVSSSHDDTILIW 580
Score = 167 (63.8 bits), Expect = 7.8e-09, P = 7.8e-09
Identities = 45/193 (23%), Positives = 85/193 (44%)
Query: 41 SINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKG 100
+I I D S K + G + ++ L L D++++ + +RVWD++T + L +
Sbjct: 324 TIKIWDKSTLECKRILTGHTGSV--LCLQYDERVIITGSSDSTVRVWDVNTGEMLNTLIH 381
Query: 101 HDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGF---CTHYFKGHKGVVSSILFHPDTD 157
H + + + G++ T DR + VWD+ GH+ V+ + D D
Sbjct: 382 HCEAVLHLRFN--NGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVV----DFD 435
Query: 158 KSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDL 217
+ S S D T++VW+ + V TL+ H + + ++S D + LWD+
Sbjct: 436 DKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYRD--RLVVSGSSDNTIRLWDI 493
Query: 218 RDYSCKLTVPTYE 230
+C + +E
Sbjct: 494 ECGACLRVLEGHE 506
Score = 145 (56.1 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 39/151 (25%), Positives = 69/151 (45%)
Query: 68 LSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVL 127
L DD+ + S I++WD STL+C R GH G + + ++ T +D V
Sbjct: 309 LQYDDQKIVSGLRDNTIKIWDKSTLECKRILTGHTGSVLCLQYDER--VIITGSSDSTVR 366
Query: 128 VWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKH 187
VWDV+ G + H V + F+ ++ + S D ++ VWD+ + + TL +
Sbjct: 367 VWDVNTGEMLNTLIHHCEAVLHLRFN----NGMMVTCSKDRSIAVWDMASPTDI-TLRRV 421
Query: 188 F--SRVTSMAITSDGSTLISAGRDKVVNLWD 216
R + D ++SA D+ + +W+
Sbjct: 422 LVGHRAAVNVVDFDDKYIVSASGDRTIKVWN 452
Score = 138 (53.6 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 35/150 (23%), Positives = 66/150 (44%)
Query: 505 NDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWS 564
+D + +G +D T +W L GH + +++ ++V+IT S D T+++W
Sbjct: 312 DDQKIVSGLRDNTIKIWDKSTLECKRILTGHTGSVLCLQYD--ERVIITGSSDSTVRVWD 369
Query: 565 ISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIA---TYDKHED 621
++ G L T H +VL F +V+C D + +W + + I H
Sbjct: 370 VNTGEMLNTLIHHCEAVLHLRF--NNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRA 427
Query: 622 KIWALAVGKKTEMFATGGSDALVNLWHDST 651
+ + K + A+G D + +W+ ST
Sbjct: 428 AVNVVDFDDKYIVSASG--DRTIKVWNTST 455
Score = 132 (51.5 bits), Expect = 5.0e-05, P = 5.0e-05
Identities = 35/134 (26%), Positives = 65/134 (48%)
Query: 365 EEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVR 424
++Q + ++++D S++ C +L GH+ VLCL + +I+TGS D++VR
Sbjct: 312 DDQKIVSGLRDNTIKIWDKSTLECKRILTGHTGSVLCLQY-----DERVIITGSSDSTVR 366
Query: 425 LWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNL 484
+WD + + H AV + F+ + +V+ S D +I VW D P ++
Sbjct: 367 VWDVNTGEMLNTLIHHCEAVLHLRFNNGM---MVTCSKDRSIAVW-------DMASPTDI 416
Query: 485 KAKAVVAAHGKDIN 498
+ V+ H +N
Sbjct: 417 TLRRVLVGHRAAVN 430
>UNIPROTKB|F1P8S8 [details] [associations]
symbol:POC1B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0042384 "cilium assembly" evidence=IEA]
[GO:0005932 "microtubule basal body" evidence=IEA] [GO:0005814
"centriole" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 OMA:TASWDTF EMBL:AAEX03009913
Ensembl:ENSCAFT00000015651 Uniprot:F1P8S8
Length = 478
Score = 262 (97.3 bits), Expect = 1.6e-19, P = 1.6e-19
Identities = 76/304 (25%), Positives = 136/304 (44%)
Query: 344 ILSKRLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLD 403
+L + G+ I + F +Q LA A+ + +++ + ++ GH ++V +
Sbjct: 9 VLERYFKGHKAAITSVDFSPSGKQ-LATASWDTFLMLWNCKPQARAFRYVGHKDVVTSVQ 67
Query: 404 TCALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSD 463
L + L+ + S+D +VRLW + R H V +V FS Q FL + S D
Sbjct: 68 FSPLGN---LLASASRDRTVRLWIPDKRGKSSEFKAHTAPVRSVDFSADGQ-FLATASED 123
Query: 464 HTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRL 523
+IKVW+ + + H + +P+ L+ + S+D+T +W
Sbjct: 124 KSIKVWNM----------YRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDT 173
Query: 524 PDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLR 583
+ V F V+F+P + +A D T+KIW I L+ ++ H+ V
Sbjct: 174 TNKQCVNNFSDSVGFANFVDFNPNGTCIASAGSDHTVKIWDIRVNKLLQHYQVHSGGVNC 233
Query: 584 ASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDAL 643
SF G I++ +DG +K+ + G I T H ++ ++ K E+F++GG+D
Sbjct: 234 VSFHPSGNYIITASSDGTLKILDLLEGRLIYTLQGHTGPVFTVSFSKGGELFSSGGADTQ 293
Query: 644 VNLW 647
V LW
Sbjct: 294 VLLW 297
Score = 242 (90.2 bits), Expect = 8.8e-17, Sum P(2) = 8.8e-17
Identities = 55/199 (27%), Positives = 101/199 (50%)
Query: 28 SSDGSFIACACGE-SINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRV 86
S+DG F+A A + SI + ++ ++ + + SPD +L+ S + I++
Sbjct: 111 SADGQFLATASEDKSIKVWNMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKI 170
Query: 87 WDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGV 146
WD + +C+ ++ G A + +P+G +A+AG+D V +WD+ +++ H G
Sbjct: 171 WDTTNKQCVNNFSDSVGFANFVDFNPNGTCIASAGSDHTVKIWDIRVNKLLQHYQVHSGG 230
Query: 147 VSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISA 206
V+ + FHP + + + S D T+++ DLL + + TL H V +++ + G S
Sbjct: 231 VNCVSFHPSGN--YIITASSDGTLKILDLLEGRLIYTLQGHTGPVFTVSFSKGGELFSSG 288
Query: 207 GRDKVVNLWDLR-DY-SCK 223
G D V LW DY +CK
Sbjct: 289 GADTQVLLWRTNFDYLNCK 307
Score = 203 (76.5 bits), Expect = 2.3e-12, Sum P(2) = 2.3e-12
Identities = 54/212 (25%), Positives = 93/212 (43%)
Query: 13 EPVLQQFYGGGPLVVSS-----DGSFIACACGESINIVDLSNASIKS-TIEGGSDTITAL 66
+PVL++++ G ++S G +A A ++ ++ ++ G D +T++
Sbjct: 7 DPVLERYFKGHKAAITSVDFSPSGKQLATASWDTFLMLWNCKPQARAFRYVGHKDVVTSV 66
Query: 67 ALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKV 126
SP LL S+ R +R+W +K H P + G LATA D+ +
Sbjct: 67 QFSPLGNLLASASRDRTVRLWIPDKRGKSSEFKAHTAPVRSVDFSADGQFLATASEDKSI 126
Query: 127 LVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDK 186
VW++ + H V F PD L+ S S+D T+++WD K+CV
Sbjct: 127 KVWNMYRQRFLYSLYRHTHWVRCAKFSPDG--RLIVSCSEDKTIKIWDTTNKQCVNNFSD 184
Query: 187 HFSRVTSMAITSDGSTLISAGRDKVVNLWDLR 218
+ +G+ + SAG D V +WD+R
Sbjct: 185 SVGFANFVDFNPNGTCIASAGSDHTVKIWDIR 216
Score = 131 (51.2 bits), Expect = 4.5e-05, P = 4.5e-05
Identities = 31/118 (26%), Positives = 53/118 (44%)
Query: 532 FRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGA 591
F+GHK I SV+FSP + + TAS D + +W+ + + GH V F G
Sbjct: 14 FKGHKAAITSVDFSPSGKQLATASWDTFLMLWNCKPQARAFRYVGHKDVVTSVQFSPLGN 73
Query: 592 QIVSCGADGLVKLWTV-RTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLWH 648
+ S D V+LW + G+ + + H + ++ + AT D + +W+
Sbjct: 74 LLASASRDRTVRLWIPDKRGKS-SEFKAHTAPVRSVDFSADGQFLATASEDKSIKVWN 130
Score = 39 (18.8 bits), Expect = 8.8e-17, Sum P(2) = 8.8e-17
Identities = 9/33 (27%), Positives = 16/33 (48%)
Query: 440 HMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFD 472
H G + V + KL+ + +S + + SFD
Sbjct: 336 HEGKIETVEINPKLEVIDLQTASPPVVDILSFD 368
>ASPGD|ASPL0000058626 [details] [associations]
symbol:AN1208 species:162425 "Emericella nidulans"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005681
"spliceosomal complex" evidence=IEA] [GO:0045292 "mRNA cis
splicing, via spliceosome" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 GO:GO:0008380
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:BN001308 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006397 GO:GO:0005681 EMBL:AACD01000017
GO:GO:0007049 HOGENOM:HOG000207595 KO:K12862 RefSeq:XP_658812.1
ProteinModelPortal:Q5BE22 STRING:Q5BE22
EnsemblFungi:CADANIAT00001416 GeneID:2876986 KEGG:ani:AN1208.2
OMA:KSEEHAR OrthoDB:EOG4QZBVP Uniprot:Q5BE22
Length = 452
Score = 261 (96.9 bits), Expect = 1.6e-19, P = 1.6e-19
Identities = 62/188 (32%), Positives = 92/188 (48%)
Query: 25 LVVSSDGSFIACACGE-SINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSRE 83
L V + + A G+ +I I +L+ +++ T+ G T+ LA+SP LFS G +
Sbjct: 149 LAVEPNNEWFASGAGDRTIKIWNLATGALRLTLTGHISTVRGLAVSPRHPYLFSCGEDKM 208
Query: 84 IRVWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGH 143
++ WDL T K +R + GH +A HP LL T G D VWD+ H GH
Sbjct: 209 VKCWDLETNKVIRHYHGHLSGVYTLALHPRLDLLVTGGRDGVARVWDMRTRSNIHVLSGH 268
Query: 144 KGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTL 203
G V+ + + D ++ +GS DATVR+WDL A K + L H + S+A T
Sbjct: 269 TGTVADVQCQ-EADPQVI-TGSLDATVRLWDLAAGKTMGVLTHHKKGIRSLATHPREFTF 326
Query: 204 ISAGRDKV 211
SA +
Sbjct: 327 ASASTGSI 334
Score = 203 (76.5 bits), Expect = 5.0e-13, P = 5.0e-13
Identities = 46/162 (28%), Positives = 73/162 (45%)
Query: 56 IEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPSGG 115
I G + +LA+ P+++ S R I++W+L+T + GH G+A P
Sbjct: 139 ISGHLGWVRSLAVEPNNEWFASGAGDRTIKIWNLATGALRLTLTGHISTVRGLAVSPRHP 198
Query: 116 LLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDL 175
L + G D+ V WD++ ++ GH V ++ HP D LL +G D RVWD+
Sbjct: 199 YLFSCGEDKMVKCWDLETNKVIRHYHGHLSGVYTLALHPRLD--LLVTGGRDGVARVWDM 256
Query: 176 LAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDL 217
+ + L H V + +I+ D V LWDL
Sbjct: 257 RTRSNIHVLSGHTGTVADVQCQEADPQVITGSLDATVRLWDL 298
Score = 202 (76.2 bits), Expect = 6.5e-13, P = 6.5e-13
Identities = 65/260 (25%), Positives = 111/260 (42%)
Query: 391 VLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFS 450
V++GH V L A+ +G+ D ++++W+ + TGH+ V +A S
Sbjct: 138 VISGHLGWVRSL---AVEPNNEWFASGAGDRTIKIWNLATGALRLTLTGHISTVRGLAVS 194
Query: 451 KKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHG--KDINSLAVAPNDSL 508
+ +L S D +K W D E N K + HG + +LA+ P L
Sbjct: 195 PR-HPYLFSCGEDKMVKCW-------DLET--N---KVIRHYHGHLSGVYTLALHPRLDL 241
Query: 509 VCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDG 568
+ TG +D A VW + ++ GH + V+ D VIT S D T+++W ++ G
Sbjct: 242 LVTGGRDGVARVWDMRTRSNIHVLSGHTGTVADVQCQEADPQVITGSLDATVRLWDLAAG 301
Query: 569 SCLKTFEGHTSSVLRASFLTRGAQIVSCGAD-GLVKLWTVRTGECIATYDKHEDKIWALA 627
+ H + S T + A G +K W GE + ++ H I L+
Sbjct: 302 KTMGVLTHHKKGI--RSLATHPREFTFASASTGSIKQWKCPGGEFMQNFEGHNAIINTLS 359
Query: 628 VGKKTEMFATGGSDALVNLW 647
V + +F+ GG + ++ W
Sbjct: 360 VNEDNVLFS-GGDNGSMSFW 378
Score = 197 (74.4 bits), Expect = 2.3e-12, P = 2.3e-12
Identities = 45/163 (27%), Positives = 72/163 (44%)
Query: 485 KAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEF 544
K V++ H + SLAV PN+ +G+ DRT +W L +T GH + +
Sbjct: 134 KLMRVISGHLGWVRSLAVEPNNEWFASGAGDRTIKIWNLATGALRLTLTGHISTVRGLAV 193
Query: 545 SPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKL 604
SP + + DK +K W + ++ + GH S V + R +V+ G DG+ ++
Sbjct: 194 SPRHPYLFSCGEDKMVKCWDLETNKVIRHYHGHLSGVYTLALHPRLDLLVTGGRDGVARV 253
Query: 605 WTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLW 647
W +RT I H + + + TG DA V LW
Sbjct: 254 WDMRTRSNIHVLSGHTGTVADVQCQEADPQVITGSLDATVRLW 296
Score = 167 (63.8 bits), Expect = 1.3e-10, Sum P(2) = 1.3e-10
Identities = 70/291 (24%), Positives = 122/291 (41%)
Query: 349 LVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALS 408
L G+ + L + YL + V+ +DL + GH V T AL
Sbjct: 181 LTGHISTVRGLA-VSPRHPYLFSCGEDKMVKCWDLETNKVIRHYHGHLSGVY---TLALH 236
Query: 409 SGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKV 468
L+VTG +D R+WD +R + V +GH G V V ++ +++GS D T+++
Sbjct: 237 PRLDLLVTGGRDGVARVWDMRTRSNIHVLSGHTGTVADVQ-CQEADPQVITGSLDATVRL 295
Query: 469 WSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVS 528
W D A K V+ H K I SLA P + + S W+ P
Sbjct: 296 W------DLAAG----KTMGVLTHHKKGIRSLATHPREFTFASASTGSIK-QWKCPGGEF 344
Query: 529 VVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFE-----GHTSS--- 580
+ F GH I ++ + D V+ + + ++ W G +T + G +
Sbjct: 345 MQNFEGHNAIINTLSVNE-DNVLFSGGDNGSMSFWDWKTGYRYQTIDTTAQPGSLEAEAG 403
Query: 581 VLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKK 631
++ ++F G ++++ AD +K+W + AT + H WA +G++
Sbjct: 404 IMTSTFDRTGLRLITGEADKTIKVWKQ---DDQATPETHP-VTWAPTLGRQ 450
Score = 161 (61.7 bits), Expect = 2.1e-08, P = 2.1e-08
Identities = 48/176 (27%), Positives = 72/176 (40%)
Query: 46 DLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPA 105
D S AS GG + A P + S ++ W + K +R GH G
Sbjct: 88 DKSGASTALVRRGGRASGAAGDDKPTSLIQRPSATRQQPPEWH-APWKLMRVISGHLGWV 146
Query: 106 IGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGS 165
+A P+ A+ DR + +W++ G GH V + P LFS
Sbjct: 147 RSLAVEPNNEWFASGAGDRTIKIWNLATGALRLTLTGHISTVRGLAVSPR--HPYLFSCG 204
Query: 166 DDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYS 221
+D V+ WDL K + H S V ++A+ L++ GRD V +WD+R S
Sbjct: 205 EDKMVKCWDLETNKVIRHYHGHLSGVYTLALHPRLDLLVTGGRDGVARVWDMRTRS 260
Score = 138 (53.6 bits), Expect = 7.0e-06, P = 7.0e-06
Identities = 44/190 (23%), Positives = 76/190 (40%)
Query: 46 DLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPA 105
D+ S + G + T+ + D + + +R+WDL+ K + H
Sbjct: 255 DMRTRSNIHVLSGHTGTVADVQCQEADPQVITGSLDATVRLWDLAAGKTMGVLTHHKKGI 314
Query: 106 IGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGS 165
+A HP A+A + W GG F+GH +++++ + D ++LFSG
Sbjct: 315 RSLATHPREFTFASASTG-SIKQWKCPGGEFMQNFEGHNAIINTLSVNED---NVLFSGG 370
Query: 166 DDATVRVWDLLAKKCVATLDKHF------SRVTSMAITSD--GSTLISAGRDKVVNLWDL 217
D+ ++ WD T+D + M T D G LI+ DK + +W
Sbjct: 371 DNGSMSFWDWKTGYRYQTIDTTAQPGSLEAEAGIMTSTFDRTGLRLITGEADKTIKVWKQ 430
Query: 218 RDYSCKLTVP 227
D + T P
Sbjct: 431 DDQATPETHP 440
Score = 60 (26.2 bits), Expect = 1.3e-10, Sum P(2) = 1.3e-10
Identities = 13/62 (20%), Positives = 27/62 (43%)
Query: 179 KCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYEMVEAVCAI 238
K + + H V S+A+ + S D+ + +W+L + +LT+ + A+
Sbjct: 134 KLMRVISGHLGWVRSLAVEPNNEWFASGAGDRTIKIWNLATGALRLTLTGHISTVRGLAV 193
Query: 239 PP 240
P
Sbjct: 194 SP 195
>TAIR|locus:2154438 [details] [associations]
symbol:AT5G23430 "AT5G23430" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0080008 "Cul4-RING ubiquitin
ligase complex" evidence=ISS] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002688
GenomeReviews:BA000015_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013 GO:GO:0005874
GO:GO:0080008 EMBL:AB018110 EMBL:BT002053 IPI:IPI00519668
IPI:IPI00532083 RefSeq:NP_197734.2 RefSeq:NP_851064.1
UniGene:At.45963 ProteinModelPortal:Q8H0T9 SMR:Q8H0T9 IntAct:Q8H0T9
PaxDb:Q8H0T9 PRIDE:Q8H0T9 EnsemblPlants:AT5G23430.1 GeneID:832409
KEGG:ath:AT5G23430 GeneFarm:2999 TAIR:At5g23430
HOGENOM:HOG000008039 InParanoid:Q8H0T9 OMA:DFKCHEG PhylomeDB:Q8H0T9
ProtClustDB:CLSN2717628 Genevestigator:Q8H0T9 GermOnline:AT5G23430
GO:GO:0008352 HAMAP:MF_03022 PANTHER:PTHR19845 Uniprot:Q8H0T9
Length = 837
Score = 267 (99.0 bits), Expect = 1.8e-19, P = 1.8e-19
Identities = 61/210 (29%), Positives = 96/210 (45%)
Query: 440 HMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVA--AHGKDI 497
H AV + +K LV+G DH + +W+ K A+++ H I
Sbjct: 15 HSAAVNCLKIGRKSSRVLVTGGEDHKVNLWAIG------------KPNAILSLYGHSSGI 62
Query: 498 NSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGD 557
+S+ ++ LV G+ T +W L + V T GH+ SV+F P + + S D
Sbjct: 63 DSVTFDASEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLD 122
Query: 558 KTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYD 617
+KIW I C+ T++GHT V F G +VS G D +VK+W + G+ + +
Sbjct: 123 TNLKIWDIRKKGCIHTYKGHTRGVNVLRFTPDGRWVVSGGEDNIVKVWDLTAGKLLTEFK 182
Query: 618 KHEDKIWALAVGKKTEMFATGGSDALVNLW 647
HE +I +L + ATG +D V W
Sbjct: 183 SHEGQIQSLDFHPHEFLLATGSADRTVKFW 212
Score = 229 (85.7 bits), Expect = 2.4e-15, P = 2.4e-15
Identities = 55/216 (25%), Positives = 94/216 (43%)
Query: 7 KKSYGCEPVLQQFYGGGPLVVSSDGSFIACACGES--INIVDLSNASIKSTIEGGSDTIT 64
K++Y + + L + S + GE +N+ + + ++ G S I
Sbjct: 4 KRAYKLQEFVAHSAAVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLYGHSSGID 63
Query: 65 ALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADR 124
++ + L+ + S I++WDL K +R+ GH I + HP G A+ D
Sbjct: 64 SVTFDASEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDT 123
Query: 125 KVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATL 184
+ +WD+ C H +KGH V+ + F PD + SG +D V+VWDL A K +
Sbjct: 124 NLKIWDIRKKGCIHTYKGHTRGVNVLRFTPDG--RWVVSGGEDNIVKVWDLTAGKLLTEF 181
Query: 185 DKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDY 220
H ++ S+ L + D+ V WDL +
Sbjct: 182 KSHEGQIQSLDFHPHEFLLATGSADRTVKFWDLETF 217
Score = 215 (80.7 bits), Expect = 7.9e-14, P = 7.9e-14
Identities = 53/199 (26%), Positives = 90/199 (45%)
Query: 27 VSSDGSFIACACGES---INIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSRE 83
V+ D S + A G + I + DL A I T+ G ++ P + S
Sbjct: 65 VTFDASEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTN 124
Query: 84 IRVWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGH 143
+++WD+ C+ ++KGH + P G + + G D V VWD+ G FK H
Sbjct: 125 LKIWDIRKKGCIHTYKGHTRGVNVLRFTPDGRWVVSGGEDNIVKVWDLTAGKLLTEFKSH 184
Query: 144 KGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTL 203
+G + S+ FHP + LL +GS D TV+ WDL + + + + V ++ DG T+
Sbjct: 185 EGQIQSLDFHPH--EFLLATGSADRTVKFWDLETFELIGSGGPETAGVRCLSFNPDGKTV 242
Query: 204 ISAGRDKVVNLWDLRDYSC 222
+ G + + ++ C
Sbjct: 243 L-CGLQESLKIFSWEPIRC 260
Score = 213 (80.0 bits), Expect = 1.3e-13, P = 1.3e-13
Identities = 58/221 (26%), Positives = 97/221 (43%)
Query: 395 HSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQ 454
HS V CL SS ++L VTG +D+ V LW + GH + +V F +
Sbjct: 15 HSAAVNCLKIGRKSS-RVL-VTGGEDHKVNLWAIGKPNAILSLYGHSSGIDSVTFDAS-E 71
Query: 455 NFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQ 514
+ +G++ TIK+W D E+ K + H + S+ P +GS
Sbjct: 72 VLVAAGAASGTIKLW-------DLEEA---KIVRTLTGHRSNCISVDFHPFGEFFASGSL 121
Query: 515 DRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTF 574
D +W + + T++GH RG+ + F+P + V++ D +K+W ++ G L F
Sbjct: 122 DTNLKIWDIRKKGCIHTYKGHTRGVNVLRFTPDGRWVVSGGEDNIVKVWDLTAGKLLTEF 181
Query: 575 EGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIAT 615
+ H + F + + AD VK W + T E I +
Sbjct: 182 KSHEGQIQSLDFHPHEFLLATGSADRTVKFWDLETFELIGS 222
Score = 206 (77.6 bits), Expect = 7.5e-13, P = 7.5e-13
Identities = 61/269 (22%), Positives = 114/269 (42%)
Query: 347 KRLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCA 406
+ V ++ + LK + + L +V ++ + + L GHS + D+
Sbjct: 10 QEFVAHSAAVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLYGHSSGI---DSVT 66
Query: 407 LSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTI 466
+ ++L+ G+ +++LWD E V TGH +V F F SGS D +
Sbjct: 67 FDASEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHP-FGEFFASGSLDTNL 125
Query: 467 KVWSFDGLSDDAEQPMNLKAKAVV---AAHGKDINSLAVAPNDSLVCTGSQDRTACVWRL 523
K+W +++ K + H + +N L P+ V +G +D VW L
Sbjct: 126 KIW-------------DIRKKGCIHTYKGHTRGVNVLRFTPDGRWVVSGGEDNIVKVWDL 172
Query: 524 PDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLR 583
+ F+ H+ I S++F P + ++ T S D+T+K W + + + T+ V
Sbjct: 173 TAGKLLTEFKSHEGQIQSLDFHPHEFLLATGSADRTVKFWDLETFELIGSGGPETAGVRC 232
Query: 584 ASFLTRGAQIVSCGADGLVKLWTVRTGEC 612
SF G ++ CG +K+++ C
Sbjct: 233 LSFNPDGKTVL-CGLQESLKIFSWEPIRC 260
>UNIPROTKB|F1N575 [details] [associations]
symbol:TAF5L "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003713 GO:GO:0043966
GO:GO:0004402 GO:GO:0030914 GO:GO:0033276
GeneTree:ENSGT00700000104377 OMA:YVDSEGP EMBL:DAAA02061261
EMBL:DAAA02061262 IPI:IPI00905134 Ensembl:ENSBTAT00000048510
ArrayExpress:F1N575 Uniprot:F1N575
Length = 585
Score = 264 (98.0 bits), Expect = 1.8e-19, P = 1.8e-19
Identities = 68/246 (27%), Positives = 114/246 (46%)
Query: 391 VLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFS 450
VL GH V A SSG +++ S+D S+R WD S + GH V + S
Sbjct: 333 VLRGHCGPVYSTRFLADSSG---LLSCSEDMSIRYWDLGSFTNTVLYQGHAYPVWDLDIS 389
Query: 451 KKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVC 510
F S S D T ++WSFD P+ + A H D++ + PN + +
Sbjct: 390 PHSLYF-ASASHDRTARLWSFD-----RTYPLR-----IYAGHLADVDCVKFHPNSNYLA 438
Query: 511 TGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSC 570
TGS D+T +W SV F GH+ + S+ FSP + + +A D+ +K+W ++ G+
Sbjct: 439 TGSTDKTVRLWSTQQGNSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGTL 498
Query: 571 LKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGK 630
K GHT ++ +F + + S D V++W +R+ C D ++ + G+
Sbjct: 499 YKELRGHTDNITSLTFSPDSSLVASASMDNSVRVWDIRSSHCSTPADGSSSELVGVYTGQ 558
Query: 631 KTEMFA 636
+ + +
Sbjct: 559 MSNVLS 564
Score = 244 (91.0 bits), Expect = 2.8e-17, P = 2.8e-17
Identities = 57/195 (29%), Positives = 88/195 (45%)
Query: 29 SDGS-FIACACGESINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRVW 87
+D S ++C+ SI DL + + +G + + L +SP S+ H R R+W
Sbjct: 348 ADSSGLLSCSEDMSIRYWDLGSFTNTVLYQGHAYPVWDLDISPHSLYFASASHDRTARLW 407
Query: 88 DLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVV 147
LR + GH + HP+ LAT D+ V +W G F GH+G V
Sbjct: 408 SFDRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSTQQGNSVRLFTGHRGPV 467
Query: 148 SSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAG 207
S+ F P+ L S +D +++WDL + L H +TS+ + D S + SA
Sbjct: 468 LSLAFSPNG--KYLASAGEDQRLKLWDLASGTLYKELRGHTDNITSLTFSPDSSLVASAS 525
Query: 208 RDKVVNLWDLRDYSC 222
D V +WD+R C
Sbjct: 526 MDNSVRVWDIRSSHC 540
Score = 233 (87.1 bits), Expect = 4.6e-16, P = 4.6e-16
Identities = 60/236 (25%), Positives = 112/236 (47%)
Query: 347 KRLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCA 406
K L G+ + +FL + L+ + ++ ++ +DL S + + + GH+ V LD
Sbjct: 332 KVLRGHCGPVYSTRFLADSSGLLSCSEDMS-IRYWDLGSFTNTVLYQGHAYPVWDLD--- 387
Query: 407 LSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTI 466
+S + + S D + RLW + + + GH+ V V F N+L +GS+D T+
Sbjct: 388 ISPHSLYFASASHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPN-SNYLATGSTDKTV 446
Query: 467 KVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDL 526
++WS +Q +++ + H + SLA +PN + + +D+ +W L
Sbjct: 447 RLWS-------TQQGNSVR---LFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASG 496
Query: 527 VSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVL 582
RGH I S+ FSP +V +AS D ++++W I C +G +S ++
Sbjct: 497 TLYKELRGHTDNITSLTFSPDSSLVASASMDNSVRVWDIRSSHCSTPADGSSSELV 552
Score = 228 (85.3 bits), Expect = 2.2e-15, Sum P(2) = 2.2e-15
Identities = 55/209 (26%), Positives = 89/209 (42%)
Query: 439 GHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDIN 498
GH G V + F L+S S D +I+ W ++ + H +
Sbjct: 336 GHCGPVYSTRFLADSSG-LLSCSEDMSIRYWDLGSFTNTV----------LYQGHAYPVW 384
Query: 499 SLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDK 558
L ++P+ + S DRTA +W + + GH + V+F P + T S DK
Sbjct: 385 DLDISPHSLYFASASHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDK 444
Query: 559 TIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDK 618
T+++WS G+ ++ F GH VL +F G + S G D +KLW + +G
Sbjct: 445 TVRLWSTQQGNSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGTLYKELRG 504
Query: 619 HEDKIWALAVGKKTEMFATGGSDALVNLW 647
H D I +L + + A+ D V +W
Sbjct: 505 HTDNITSLTFSPDSSLVASASMDNSVRVW 533
Score = 200 (75.5 bits), Expect = 1.9e-12, P = 1.9e-12
Identities = 52/184 (28%), Positives = 78/184 (42%)
Query: 34 IACACGESINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLK 93
+AC E + D + + + G + + D L S IR WDL +
Sbjct: 312 LACDFLEEEDDEDDNLGTEMKVLRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDLGSFT 371
Query: 94 CLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFH 153
++GH P + P A+A DR +W D + + GH V + FH
Sbjct: 372 NTVLYQGHAYPVWDLDISPHSLYFASASHDRTARLWSFDRTYPLRIYAGHLADVDCVKFH 431
Query: 154 PDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVN 213
P+++ L +GS D TVR+W V H V S+A + +G L SAG D+ +
Sbjct: 432 PNSN--YLATGSTDKTVRLWSTQQGNSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLK 489
Query: 214 LWDL 217
LWDL
Sbjct: 490 LWDL 493
Score = 199 (75.1 bits), Expect = 2.4e-12, P = 2.4e-12
Identities = 42/143 (29%), Positives = 73/143 (51%)
Query: 63 ITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGA 122
+ + P+ L + + +R+W +R + GH GP + +A P+G LA+AG
Sbjct: 425 VDCVKFHPNSNYLATGSTDKTVRLWSTQQGNSVRLFTGHRGPVLSLAFSPNGKYLASAGE 484
Query: 123 DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVA 182
D+++ +WD+ G +GH ++S+ F PD+ SL+ S S D +VRVWD+ + C
Sbjct: 485 DQRLKLWDLASGTLYKELRGHTDNITSLTFSPDS--SLVASASMDNSVRVWDIRSSHCST 542
Query: 183 TLDKHFSRVTSMAITSDGSTLIS 205
D S + + T S ++S
Sbjct: 543 PADGSSSELVGV-YTGQMSNVLS 564
Score = 187 (70.9 bits), Expect = 7.4e-11, Sum P(2) = 7.4e-11
Identities = 41/172 (23%), Positives = 76/172 (44%)
Query: 476 DDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGH 535
DD + + + K V+ H + S + S + + S+D + W L + V ++GH
Sbjct: 321 DDEDDNLGTEMK-VLRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDLGSFTNTVLYQGH 379
Query: 536 KRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVS 595
+W ++ SP +AS D+T ++WS L+ + GH + V F + +
Sbjct: 380 AYPVWDLDISPHSLYFASASHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLAT 439
Query: 596 CGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLW 647
D V+LW+ + G + + H + +LA + A+ G D + LW
Sbjct: 440 GSTDKTVRLWSTQQGNSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLW 491
Score = 130 (50.8 bits), Expect = 7.8e-05, P = 7.8e-05
Identities = 24/80 (30%), Positives = 41/80 (51%)
Query: 58 GGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPSGGLL 117
G + +LA SP+ K L S+G + +++WDL++ + +GH + P L+
Sbjct: 462 GHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGTLYKELRGHTDNITSLTFSPDSSLV 521
Query: 118 ATAGADRKVLVWDVDGGFCT 137
A+A D V VWD+ C+
Sbjct: 522 ASASMDNSVRVWDIRSSHCS 541
Score = 121 (47.7 bits), Expect = 0.00074, P = 0.00074
Identities = 26/86 (30%), Positives = 45/86 (52%)
Query: 25 LVVSSDGSFIACACGES--INIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSR 82
L S +G ++A A GE + + DL++ ++ + G +D IT+L SPD L+ S+
Sbjct: 470 LAFSPNGKYLASA-GEDQRLKLWDLASGTLYKELRGHTDNITSLTFSPDSSLVASASMDN 528
Query: 83 EIRVWDLSTLKCLRSWKGHDGPAIGM 108
+RVWD+ + C G +G+
Sbjct: 529 SVRVWDIRSSHCSTPADGSSSELVGV 554
Score = 114 (45.2 bits), Expect = 5.1e-09, Sum P(2) = 5.1e-09
Identities = 39/116 (33%), Positives = 57/116 (49%)
Query: 346 SKRL-VGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDT 404
S RL G+ +L L F +YLA A ++++++DL+S + L GH++ + L
Sbjct: 456 SVRLFTGHRGPVLSLAF-SPNGKYLASAGEDQRLKLWDLASGTLYKELRGHTDNITSL-- 512
Query: 405 CALSSGKILIVTGSKDNSVRLWDSESRCC-----------VGVGTGHMGAVGAVAF 449
S L+ + S DNSVR+WD S C VGV TG M V +V F
Sbjct: 513 -TFSPDSSLVASASMDNSVRVWDIRSSHCSTPADGSSSELVGVYTGQMSNVLSVQF 567
Score = 104 (41.7 bits), Expect = 5.1e-09, Sum P(2) = 5.1e-09
Identities = 55/212 (25%), Positives = 86/212 (40%)
Query: 68 LSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGH--DGPAIGMACHPSGGLLATAGADRK 125
+SPD KLL + + I++W L + K L+S + H D I +AC L +
Sbjct: 272 VSPDSKLLAAGFDNSCIKLWSLRSKK-LKS-EPHQVDVSRIHLACD----FLEEEDDE-- 323
Query: 126 VLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLD 185
D + G +GH G V S F D+ S L S S+D ++R WDL +
Sbjct: 324 ----DDNLGTEMKVLRGHCGPVYSTRFLADS--SGLLSCSEDMSIRYWDLGSFTNTVLYQ 377
Query: 186 KHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYEMVEAVCA-IPPGSAF 244
H V + I+ SA D+ LW D + L + + + C P S +
Sbjct: 378 GHAYPVWDLDISPHSLYFASASHDRTARLWSF-DRTYPLRIYAGHLADVDCVKFHPNSNY 436
Query: 245 DSFLSSYNQQTIKKKRRSLEIHFITVGERGIV 276
+ S+ + ++ + T G RG V
Sbjct: 437 LATGSTDKTVRLWSTQQGNSVRLFT-GHRGPV 467
Score = 45 (20.9 bits), Expect = 2.2e-15, Sum P(2) = 2.2e-15
Identities = 12/47 (25%), Positives = 24/47 (51%)
Query: 385 SMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESR 431
S++ Y A ++ L L+T +S L+ G ++ ++LW S+
Sbjct: 251 SLTTIYFYAFYNTEQL-LNTAEVSPDSKLLAAGFDNSCIKLWSLRSK 296
Score = 38 (18.4 bits), Expect = 3.9e-10, Sum P(2) = 3.9e-10
Identities = 7/17 (41%), Positives = 11/17 (64%)
Query: 452 KLQNFLVSGSSDHTIKV 468
+L+NFL S H+ +V
Sbjct: 75 RLRNFLTDSDSQHSHEV 91
>UNIPROTKB|E2RBV0 [details] [associations]
symbol:WDR61 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:2001162 "positive regulation of histone
H3-K79 methylation" evidence=IEA] [GO:0080182 "histone H3-K4
trimethylation" evidence=IEA] [GO:0055087 "Ski complex"
evidence=IEA] [GO:0051571 "positive regulation of histone H3-K4
methylation" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0045638 "negative regulation of myeloid cell differentiation"
evidence=IEA] [GO:0035327 "transcriptionally active chromatin"
evidence=IEA] [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=IEA]
[GO:0016593 "Cdc73/Paf1 complex" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327 GO:GO:0051571
GO:GO:0032968 GO:GO:0080182 GO:GO:0016593 GO:GO:0045638
GO:GO:2001162 GeneTree:ENSGT00700000104507 GO:GO:0055087 CTD:80349
KO:K12602 OMA:IATGSHH EMBL:AAEX03002395 EMBL:AAEX03002396
RefSeq:XP_536215.2 ProteinModelPortal:E2RBV0
Ensembl:ENSCAFT00000022589 GeneID:479068 KEGG:cfa:479068
NextBio:20854309 Uniprot:E2RBV0
Length = 305
Score = 242 (90.2 bits), Expect = 1.8e-19, P = 1.8e-19
Identities = 72/263 (27%), Positives = 123/263 (46%)
Query: 386 MSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSES-RCCVGVGTGHMGAV 444
+ + L GH V+ +D +S + + S D +RLWD ++ + + G + A
Sbjct: 54 LDLQWSLEGHQLGVVSVD---ISHTLPIAASSSLDAHIRLWDLDNGKQIKSIDAGPVDA- 109
Query: 445 GAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAP 504
+AFS Q +L +G+ H KV F S E ++ + GK I S+A +P
Sbjct: 110 WTLAFSPDSQ-YLATGT--HVGKVNIFGVESGKKEYSLDTR--------GKFILSIAYSP 158
Query: 505 NDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWS 564
+ + +G+ D ++ + + T GH I S+ FSP Q+++TAS D IKI+
Sbjct: 159 DGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYD 218
Query: 565 ISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIW 624
+ + T GH S VL +F VS +D VK+W V T C+ T+ H+D++W
Sbjct: 219 VQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCVHTFFDHQDQVW 278
Query: 625 ALAVGKKTEMFATGGSDALVNLW 647
+ + G D ++++
Sbjct: 279 GVKYNGNGSKIVSVGDDQEIHVY 301
Score = 222 (83.2 bits), Expect = 1.0e-16, P = 1.0e-16
Identities = 55/193 (28%), Positives = 93/193 (48%)
Query: 25 LVVSSDGSFIACACGES-INIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSRE 83
L S D ++A +NI + + + +++ I ++A SPD K L S
Sbjct: 112 LAFSPDSQYLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGI 171
Query: 84 IRVWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGH 143
I ++D++T K L + +GH P + P LL TA D + ++DV GH
Sbjct: 172 INIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGH 231
Query: 144 KGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTL 203
V ++ F PD D + S S D +V+VWD+ + CV T H +V + +GS +
Sbjct: 232 ASWVLNVAFCPD-DTHFV-SSSSDKSVKVWDVGTRTCVHTFFDHQDQVWGVKYNGNGSKI 289
Query: 204 ISAGRDKVVNLWD 216
+S G D+ ++++D
Sbjct: 290 VSVGDDQEIHVYD 302
Score = 207 (77.9 bits), Expect = 2.5e-14, P = 2.5e-14
Identities = 54/182 (29%), Positives = 88/182 (48%)
Query: 42 INIVDLSNAS-IKSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKG 100
I + DL N IKS G D T LA SPD + L + H ++ ++ + + K S
Sbjct: 88 IRLWDLDNGKQIKSIDAGPVDAWT-LAFSPDSQYLATGTHVGKVNIFGVESGKKEYSLDT 146
Query: 101 HDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSL 160
+ +A P G LA+ D + ++D+ G H +GH + S+ F PD+ L
Sbjct: 147 RGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQ--L 204
Query: 161 LFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDY 220
L + SDD ++++D+ TL H S V ++A D + +S+ DK V +WD+
Sbjct: 205 LVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTR 264
Query: 221 SC 222
+C
Sbjct: 265 TC 266
Score = 165 (63.1 bits), Expect = 2.7e-09, P = 2.7e-09
Identities = 58/240 (24%), Positives = 101/240 (42%)
Query: 414 IVTGSKDNSVRLWD-SESRCCVGVGT-GHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSF 471
+VTGS D+ V++W + R + GH V +V S L S S D I++W
Sbjct: 35 VVTGSLDDLVKVWKWCDERLDLQWSLEGHQLGVVSVDISHTLP-IAASSSLDAHIRLWDL 93
Query: 472 DGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVT 531
D + +Q ++ A V D +LA +P+ + TG+ ++ + +
Sbjct: 94 D----NGKQIKSIDAGPV------DAWTLAFSPDSQYLATGTHVGKVNIFGVESGKKEYS 143
Query: 532 FRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGA 591
+ I S+ +SP + + + + D I I+ I+ G L T EGH + +F
Sbjct: 144 LDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQ 203
Query: 592 QIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLWHDST 651
+V+ DG +K++ V+ T H + +A F + SD V +W T
Sbjct: 204 LLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGT 263
Score = 156 (60.0 bits), Expect = 2.9e-08, P = 2.9e-08
Identities = 48/200 (24%), Positives = 93/200 (46%)
Query: 365 EEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALS-SGKILIVTGSKDNSV 423
+ QYLA T++ +V ++ + S Y L + +L + A S GK L +G+ D +
Sbjct: 117 DSQYLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSI---AYSPDGKYL-ASGAIDGII 172
Query: 424 RLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMN 483
++D + + GH + ++ FS Q LV+ S D IK++ Q N
Sbjct: 173 NIFDIATGKLLHTLEGHAMPIRSLTFSPDSQ-LLVTASDDGYIKIYDV--------QHAN 223
Query: 484 LKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVE 543
L ++ H + ++A P+D+ + S D++ VW + V TF H+ +W V+
Sbjct: 224 LAG--TLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCVHTFFDHQDQVWGVK 281
Query: 544 FSPVDQVVITASGDKTIKIW 563
++ +++ D+ I ++
Sbjct: 282 YNGNGSKIVSVGDDQEIHVY 301
Score = 148 (57.2 bits), Expect = 2.3e-07, P = 2.3e-07
Identities = 48/203 (23%), Positives = 90/203 (44%)
Query: 55 TIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPSG 114
++EG + ++ +S + SS IR+WDL K ++S A +A P
Sbjct: 59 SLEGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLDNGKQIKSIDAGPVDAWTLAFSPDS 118
Query: 115 GLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWD 174
LAT KV ++ V+ G + + SI + PD L SG+ D + ++D
Sbjct: 119 QYLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDG--KYLASGAIDGIINIFD 176
Query: 175 LLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYEMVEA 234
+ K + TL+ H + S+ + D L++A D + ++D++ + T+ +
Sbjct: 177 IATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVL 236
Query: 235 VCAIPPGSAFDSFLSSYNQQTIK 257
A P F+SS + +++K
Sbjct: 237 NVAFCPDDTH--FVSSSSDKSVK 257
Score = 143 (55.4 bits), Expect = 8.6e-07, P = 8.6e-07
Identities = 41/211 (19%), Positives = 94/211 (44%)
Query: 440 HMGAVGAVAF-SKKLQNF--LVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKD 496
H A+ +VA+ + K +N +V+GS D +KVW + ++ ++L+ + H
Sbjct: 15 HDDAIWSVAWGTNKKENSETVVTGSLDDLVKVWKW------CDERLDLQWS--LEGHQLG 66
Query: 497 INSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASG 556
+ S+ ++ + + S D +W L + + + W++ FSP Q + T +
Sbjct: 67 VVSVDISHTLPIAASSSLDAHIRLWDLDNGKQIKSIDAGPVDAWTLAFSPDSQYLATGTH 126
Query: 557 DKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATY 616
+ I+ + G + + +L ++ G + S DG++ ++ + TG+ + T
Sbjct: 127 VGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTL 186
Query: 617 DKHEDKIWALAVGKKTEMFATGGSDALVNLW 647
+ H I +L +++ T D + ++
Sbjct: 187 EGHAMPIRSLTFSPDSQLLVTASDDGYIKIY 217
>ZFIN|ZDB-GENE-051120-180 [details] [associations]
symbol:taf5 "TAF5 RNA polymerase II, TATA box
binding protein (TBP)-associated factor" species:7955 "Danio rerio"
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320
SMART:SM00667 ZFIN:ZDB-GENE-051120-180 GO:GO:0005634 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GeneTree:ENSGT00700000104377 HOVERGEN:HBG050226 OMA:ERQNNQI
OrthoDB:EOG469QW7 HOGENOM:HOG000212424 EMBL:CR812943
IPI:IPI00656497 UniGene:Dr.78627 ProteinModelPortal:B8JIQ0
Ensembl:ENSDART00000015007 ArrayExpress:B8JIQ0 Bgee:B8JIQ0
Uniprot:B8JIQ0
Length = 756
Score = 260 (96.6 bits), Expect = 2.0e-19, Sum P(2) = 2.0e-19
Identities = 67/235 (28%), Positives = 101/235 (42%)
Query: 413 LIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFD 472
LI S D R+ D ++ + GH G V V+FS +N+L+S S D TI++WS
Sbjct: 471 LIDKESDDVLERIMDEKTSSESKILHGHSGPVYGVSFSPD-RNYLLSSSEDGTIRLWSLQ 529
Query: 473 GLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTF 532
+ H + +P +G DR A +W + F
Sbjct: 530 TFT----------CLVGYKGHNYPVWDTQFSPFGYYFVSGGHDRVARLWATDHYQPLRIF 579
Query: 533 RGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQ 592
GH + F P V T S D+T+++W + +G+C++ F GH + +F G
Sbjct: 580 AGHLADVTCTRFHPNSNYVATGSSDRTVRLWDVLNGNCVRIFTGHKGPIHSLAFSPNGKF 639
Query: 593 IVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLW 647
+ S DG V LW + G IA H I+AL + E+ A+G D V LW
Sbjct: 640 LASGSTDGRVLLWDIGHGLMIAELKGHTGTIYALKFSRDGEIIASGSIDNTVRLW 694
Score = 255 (94.8 bits), Expect = 7.1e-19, Sum P(2) = 7.1e-19
Identities = 73/242 (30%), Positives = 118/242 (48%)
Query: 379 QVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVG- 437
++ D + S S +L GHS V + + S + +++ S+D ++RLW ++ C+ VG
Sbjct: 482 RIMDEKTSSESKILHGHSGPVYGV---SFSPDRNYLLSSSEDGTIRLWSLQTFTCL-VGY 537
Query: 438 TGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDI 497
GH V FS + VSG D ++W+ D QP+ + A H D+
Sbjct: 538 KGHNYPVWDTQFSP-FGYYFVSGGHDRVARLWATDHY-----QPLR-----IFAGHLADV 586
Query: 498 NSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGD 557
PN + V TGS DRT +W + + V F GHK I S+ FSP + + + S D
Sbjct: 587 TCTRFHPNSNYVATGSSDRTVRLWDVLNGNCVRIFTGHKGPIHSLAFSPNGKFLASGSTD 646
Query: 558 KTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGA-DGLVKLWTV-RTGECIAT 615
+ +W I G + +GHT ++ F +R +I++ G+ D V+LW V R + + T
Sbjct: 647 GRVLLWDIGHGLMIAELKGHTGTIYALKF-SRDGEIIASGSIDNTVRLWDVMRAIDDVET 705
Query: 616 YD 617
D
Sbjct: 706 DD 707
Score = 254 (94.5 bits), Expect = 3.8e-18, P = 3.8e-18
Identities = 58/174 (33%), Positives = 82/174 (47%)
Query: 44 IVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDG 103
I+D +S + G S + ++ SPD L SS IR+W L T CL +KGH+
Sbjct: 483 IMDEKTSSESKILHGHSGPVYGVSFSPDRNYLLSSSEDGTIRLWSLQTFTCLVGYKGHNY 542
Query: 104 PAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFS 163
P P G + G DR +W D F GH V+ FHP+++ + +
Sbjct: 543 PVWDTQFSPFGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVTCTRFHPNSN--YVAT 600
Query: 164 GSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDL 217
GS D TVR+WD+L CV H + S+A + +G L S D V LWD+
Sbjct: 601 GSSDRTVRLWDVLNGNCVRIFTGHKGPIHSLAFSPNGKFLASGSTDGRVLLWDI 654
Score = 233 (87.1 bits), Expect = 7.5e-16, P = 7.5e-16
Identities = 51/149 (34%), Positives = 70/149 (46%)
Query: 69 SPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLV 128
SP S GH R R+W + LR + GH HP+ +AT +DR V +
Sbjct: 550 SPFGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVTCTRFHPNSNYVATGSSDRTVRL 609
Query: 129 WDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHF 188
WDV G C F GHKG + S+ F P+ L SGS D V +WD+ +A L H
Sbjct: 610 WDVLNGNCVRIFTGHKGPIHSLAFSPNG--KFLASGSTDGRVLLWDIGHGLMIAELKGHT 667
Query: 189 SRVTSMAITSDGSTLISAGRDKVVNLWDL 217
+ ++ + DG + S D V LWD+
Sbjct: 668 GTIYALKFSRDGEIIASGSIDNTVRLWDV 696
Score = 208 (78.3 bits), Expect = 1.0e-13, Sum P(2) = 1.0e-13
Identities = 53/220 (24%), Positives = 102/220 (46%)
Query: 346 SKRLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTC 405
SK L G++ + + F + YL ++ ++++ L + +C GH+ V DT
Sbjct: 492 SKILHGHSGPVYGVSF-SPDRNYLLSSSEDGTIRLWSLQTFTCLVGYKGHNYPVW--DT- 547
Query: 406 ALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHT 465
S V+G D RLW ++ + + GH+ V F N++ +GSSD T
Sbjct: 548 QFSPFGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVTCTRFHPN-SNYVATGSSDRT 606
Query: 466 IKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPD 525
+++W +N + H I+SLA +PN + +GS D +W +
Sbjct: 607 VRLWDV----------LNGNCVRIFTGHKGPIHSLAFSPNGKFLASGSTDGRVLLWDIGH 656
Query: 526 LVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSI 565
+ + +GH I++++FS +++ + S D T+++W +
Sbjct: 657 GLMIAELKGHTGTIYALKFSRDGEIIASGSIDNTVRLWDV 696
Score = 204 (76.9 bits), Expect = 1.1e-12, P = 1.1e-12
Identities = 47/146 (32%), Positives = 73/146 (50%)
Query: 63 ITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGA 122
+T P+ + + R +R+WD+ C+R + GH GP +A P+G LA+
Sbjct: 586 VTCTRFHPNSNYVATGSSDRTVRLWDVLNGNCVRIFTGHKGPIHSLAFSPNGKFLASGST 645
Query: 123 DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLL-AKKCV 181
D +VL+WD+ G KGH G + ++ F D + ++ SGS D TVR+WD++ A V
Sbjct: 646 DGRVLLWDIGHGLMIAELKGHTGTIYALKFSRDGE--IIASGSIDNTVRLWDVMRAIDDV 703
Query: 182 ATLDKHFSRVTSMAITSDGSTLISAG 207
T D F+ T D S + G
Sbjct: 704 ETDD--FTAATGHIHLPDNSQELLLG 727
Score = 134 (52.2 bits), Expect = 2.9e-13, Sum P(2) = 2.9e-13
Identities = 35/113 (30%), Positives = 58/113 (51%)
Query: 368 YLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALS-SGKILIVTGSKDNSVRLW 426
Y+A ++ V+++D+ + +C + GH + L A S +GK L +GS D V LW
Sbjct: 597 YVATGSSDRTVRLWDVLNGNCVRIFTGHKGPIHSL---AFSPNGKFL-ASGSTDGRVLLW 652
Query: 427 DSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAE 479
D + GH G + A+ FS+ + + SGS D+T+++W DD E
Sbjct: 653 DIGHGLMIAELKGHTGTIYALKFSRDGE-IIASGSIDNTVRLWDVMRAIDDVE 704
Score = 127 (49.8 bits), Expect = 2.9e-13, Sum P(2) = 2.9e-13
Identities = 46/183 (25%), Positives = 72/183 (39%)
Query: 63 ITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGA 122
+TA+ + D L+ +RVW + T K LR K + + S +L
Sbjct: 429 LTAVDFTDDSSLIAGGFADSTVRVWSV-TPKKLRKVKS--AADLNLIDKESDDVL----- 480
Query: 123 DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVA 182
+R + D + GH G V + F PD ++ L S S+D T+R+W L C+
Sbjct: 481 ER---IMDEKTSSESKILHGHSGPVYGVSFSPD--RNYLLSSSEDGTIRLWSLQTFTCLV 535
Query: 183 TLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYEMVEAVCA-IPPG 241
H V + G +S G D+V LW Y L + + + C P
Sbjct: 536 GYKGHNYPVWDTQFSPFGYYFVSGGHDRVARLWATDHYQ-PLRIFAGHLADVTCTRFHPN 594
Query: 242 SAF 244
S +
Sbjct: 595 SNY 597
Score = 125 (49.1 bits), Expect = 4.7e-13, Sum P(2) = 4.7e-13
Identities = 33/138 (23%), Positives = 55/138 (39%)
Query: 85 RVWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHK 144
R+ D T + GH GP G++ P L ++ D + +W + C +KGH
Sbjct: 482 RIMDEKTSSESKILHGHSGPVYGVSFSPDRNYLLSSSEDGTIRLWSLQTFTCLVGYKGHN 541
Query: 145 GVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLI 204
V F P SG D R+W + + H + VT + + +
Sbjct: 542 YPVWDTQFSPFG--YYFVSGGHDRVARLWATDHYQPLRIFAGHLADVTCTRFHPNSNYVA 599
Query: 205 SAGRDKVVNLWDLRDYSC 222
+ D+ V LWD+ + +C
Sbjct: 600 TGSSDRTVRLWDVLNGNC 617
Score = 122 (48.0 bits), Expect = 0.00081, P = 0.00081
Identities = 36/143 (25%), Positives = 59/143 (41%)
Query: 505 NDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWS 564
+ SL+ G D T VW VT + ++ + + + +D+ S D +I
Sbjct: 437 DSSLIAGGFADSTVRVWS-------VTPKKLRKVKSAADLNLIDK----ESDDVLERIMD 485
Query: 565 ISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIW 624
S K GH+ V SF ++S DG ++LW+++T C+ Y H +W
Sbjct: 486 EKTSSESKILHGHSGPVYGVSFSPDRNYLLSSSEDGTIRLWSLQTFTCLVGYKGHNYPVW 545
Query: 625 ALAVGKKTEMFATGGSDALVNLW 647
F +GG D + LW
Sbjct: 546 DTQFSPFGYYFVSGGHDRVARLW 568
Score = 54 (24.1 bits), Expect = 2.0e-19, Sum P(2) = 2.0e-19
Identities = 17/67 (25%), Positives = 32/67 (47%)
Query: 155 DTDK--SLLFSGSDDATVRVW-DLLAKKCVATLDKHFSRVTSMAITSDGSTLISAG-RDK 210
D+DK +++ +R+ + L C T + +T++ T D S+LI+ G D
Sbjct: 390 DSDKLDKIMYMKESTKRIRLGPETLPSICFYTFLNAYQGLTAVDFTDD-SSLIAGGFADS 448
Query: 211 VVNLWDL 217
V +W +
Sbjct: 449 TVRVWSV 455
Score = 44 (20.5 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 29/137 (21%), Positives = 51/137 (37%)
Query: 157 DKSLLFSGSDDATVRVWDLLAKKC-----VATL---DKHFSRVTSMAI---TSDGSTLIS 205
D SL+ G D+TVRVW + KK A L DK V + TS S ++
Sbjct: 437 DSSLIAGGFADSTVRVWSVTPKKLRKVKSAADLNLIDKESDDVLERIMDEKTSSESKILH 496
Query: 206 AGRDKVVNLWDLRDYSCKLTVPTYEMVEAVCAIPPGSAFDSFLSSYNQQTIKKKRRSLEI 265
V + D + L+ + + ++ + + +N +
Sbjct: 497 GHSGPVYGVSFSPDRNYLLSSSEDGTIR-LWSLQTFTCLVGY-KGHNYPVWDTQFSPFGY 554
Query: 266 HFITVGERGIVRMWNAD 282
+F++ G + R+W D
Sbjct: 555 YFVSGGHDRVARLWATD 571
Score = 38 (18.4 bits), Expect = 9.3e-18, Sum P(2) = 9.3e-18
Identities = 7/14 (50%), Positives = 10/14 (71%)
Query: 413 LIVTGSKDNSVRLW 426
LI G D++VR+W
Sbjct: 440 LIAGGFADSTVRVW 453
>UNIPROTKB|P74598 [details] [associations]
symbol:sll1491 "Uncharacterized WD repeat-containing
protein sll1491" species:1111708 "Synechocystis sp. PCC 6803
substr. Kazusa" [GO:0030288 "outer membrane-bounded periplasmic
space" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GO:GO:0030288 EMBL:BA000022
GenomeReviews:BA000022_GR PIR:S76794 RefSeq:NP_442894.1
RefSeq:YP_005652955.1 ProteinModelPortal:P74598 IntAct:P74598
GeneID:12255406 GeneID:952007 KEGG:syn:sll1491 KEGG:syy:SYNGTS_3002
PATRIC:23843592 OMA:KMPEQTI ProtClustDB:CLSK2301952 Uniprot:P74598
Length = 348
Score = 200 (75.5 bits), Expect = 2.0e-19, Sum P(2) = 2.0e-19
Identities = 64/226 (28%), Positives = 99/226 (43%)
Query: 56 IEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPSGG 115
+ G ITAL ++PD K L + +I + DL+ + + S + +A G
Sbjct: 57 LSGFQGIITALNITPDGKYLAVATADNQITLIDLANQEVVYSQRSPVNNFADLAISADGQ 116
Query: 116 LLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDL 175
LA A AD V V V G GH VS + F PD + + SG D T+R+W+
Sbjct: 117 WLAIA-ADNNVDVRRVRDGMRVETLVGHTDKVSGVAFSPDGETIVSVSGGD-RTIRIWER 174
Query: 176 LAKKCVATLDKHFSRVTSMAITSDGSTLISA--GRDKVVNLWDLRDYSCKLTVPTYE-MV 232
+ + TL + TS+ T DGS I+ G+D+ + WD + T P +
Sbjct: 175 ASGNLIQTLADNLGPTTSVVFTPDGSQFITGAIGQDRTIKFWDANTFELLGTSPQQPGFI 234
Query: 233 EAVCAIPPG----SAFDSFLSSYNQQTIKK----KRRSLEIHFITV 270
+ P G A +F+ ++N K+ + SLEI+ I V
Sbjct: 235 NGLAVTPDGRKLVGAVRNFVKAWNLADAKELFSVRGPSLEINTIAV 280
Score = 196 (74.1 bits), Expect = 1.3e-12, P = 1.3e-12
Identities = 75/352 (21%), Positives = 162/352 (46%)
Query: 223 KLTVPTYEMVEAVCAIPPGSAFDSFLSSYNQQTIKKKRRSLEIHFITV-GERGIVRMWNA 281
+ + P + C + PG + S+ N T+ + S + + G +GI+ N
Sbjct: 10 QFSAPATFFLTVACLVYPGENAHANASTPNPYTVAQTTASPSVAVENLSGFQGIITALNI 69
Query: 282 DSACLY-EQKSSDVTISFEMDDSKRGFTAATVLPSNQGL-LCVTADQQLLLYTT---VEV 336
Y ++D I+ +D + + + P N L ++AD Q L V+V
Sbjct: 70 TPDGKYLAVATADNQITL-IDLANQEVVYSQRSPVNNFADLAISADGQWLAIAADNNVDV 128
Query: 337 PEKKMELILSKRLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHS 396
+ + + + LVG+ +++ + F + E ++V+ +++++ +S + LA +
Sbjct: 129 -RRVRDGMRVETLVGHTDKVSGVAFSPDGETIVSVSGGDRTIRIWERASGNLIQTLADN- 186
Query: 397 EIVLCLDTCALSSGKILIVTGS--KDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQ 454
+ G I TG+ +D +++ WD+ + +G G + +A + +
Sbjct: 187 -LGPTTSVVFTPDGSQFI-TGAIGQDRTIKFWDANTFELLGTSPQQPGFINGLAVTPDGR 244
Query: 455 NFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQ 514
+ G+ + +K W+ DA++ +++ ++ +IN++AV+PN+ V T ++
Sbjct: 245 KLV--GAVRNFVKAWNLA----DAKELFSVRGPSL------EINTIAVSPNNRWVATANK 292
Query: 515 DRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSIS 566
+ T ++ L + V T RGH+ + S+ FSP + + + DKT+KIW +S
Sbjct: 293 EGTIMIFDLANGKQVTTLRGHQGWVLSLAFSPDGNTLYSGAEDKTVKIWDLS 344
Score = 195 (73.7 bits), Expect = 1.7e-12, P = 1.7e-12
Identities = 77/288 (26%), Positives = 126/288 (43%)
Query: 331 YTTVEVPEKKMELI-LSKRLVGYNEE-----ILDLKFLGEEEQYLAVAT--NIEQVQVYD 382
Y V + ++ LI L+ + V Y++ DL + + Q+LA+A N++ +V D
Sbjct: 75 YLAVATADNQITLIDLANQEVVYSQRSPVNNFADLA-ISADGQWLAIAADNNVDVRRVRD 133
Query: 383 LSSMSCSYVLAGHSEIVLCLDTCALS-SGKILIVTGSKDNSVRLWDSESRCCVGVGTGHM 441
M L GH++ V A S G+ ++ D ++R+W+ S + ++
Sbjct: 134 --GMRVE-TLVGHTDKV---SGVAFSPDGETIVSVSGGDRTIRIWERASGNLIQTLADNL 187
Query: 442 GAVGAVAFSKKLQNFLVSG-SSDHTIKVW---SFDGLSDDAEQPMNLKAKAVVAAHGKDI 497
G +V F+ F+ D TIK W +F+ L +QP G I
Sbjct: 188 GPTTSVVFTPDGSQFITGAIGQDRTIKFWDANTFELLGTSPQQP------------GF-I 234
Query: 498 NSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGD 557
N LAV P D G+ W L D + + RG I ++ SP ++ V TA+ +
Sbjct: 235 NGLAVTP-DGRKLVGAVRNFVKAWNLADAKELFSVRGPSLEINTIAVSPNNRWVATANKE 293
Query: 558 KTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLW 605
TI I+ +++G + T GH VL +F G + S D VK+W
Sbjct: 294 GTIMIFDLANGKQVTTLRGHQGWVLSLAFSPDGNTLYSGAEDKTVKIW 341
Score = 188 (71.2 bits), Expect = 5.8e-18, Sum P(2) = 5.8e-18
Identities = 50/199 (25%), Positives = 98/199 (49%)
Query: 25 LVVSSDGSFIACACGES-INIVDLSNASIKSTIEGGSDTITALALSPDDK-LLFSSGHSR 82
L ++ DG ++A A ++ I ++DL+N + + + LA+S D + L ++ ++
Sbjct: 67 LNITPDGKYLAVATADNQITLIDLANQEVVYSQRSPVNNFADLAISADGQWLAIAADNNV 126
Query: 83 EIR-VWDLSTLKCLRSWKGHDGPAIGMACHPSGG-LLATAGADRKVLVWDVDGGFCTHYF 140
++R V D ++ L GH G+A P G +++ +G DR + +W+ G
Sbjct: 127 DVRRVRDGMRVETL---VGHTDKVSGVAFSPDGETIVSVSGGDRTIRIWERASGNLIQTL 183
Query: 141 KGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDG 200
+ G +S++F PD + + + D T++ WD + + T + + +A+T DG
Sbjct: 184 ADNLGPTTSVVFTPDGSQFITGAIGQDRTIKFWDANTFELLGTSPQQPGFINGLAVTPDG 243
Query: 201 STLISAGRDKVVNLWDLRD 219
L+ A R+ V W+L D
Sbjct: 244 RKLVGAVRN-FVKAWNLAD 261
Score = 178 (67.7 bits), Expect = 1.4e-10, P = 1.4e-10
Identities = 54/195 (27%), Positives = 88/195 (45%)
Query: 28 SSDGSFIACACG--ESINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSS--GHSRE 83
S DG I G +I I + ++ ++ T+ T++ +PD + G R
Sbjct: 153 SPDGETIVSVSGGDRTIRIWERASGNLIQTLADNLGPTTSVVFTPDGSQFITGAIGQDRT 212
Query: 84 IRVWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRK-VLVWDVDGGFCTHYFKG 142
I+ WD +T + L + G G+A P G L GA R V W++ +G
Sbjct: 213 IKFWDANTFELLGTSPQQPGFINGLAVTPDGRKLV--GAVRNFVKAWNLADAKELFSVRG 270
Query: 143 HKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGST 202
+++I P+ + + + + T+ ++DL K V TL H V S+A + DG+T
Sbjct: 271 PSLEINTIAVSPNN--RWVATANKEGTIMIFDLANGKQVTTLRGHQGWVLSLAFSPDGNT 328
Query: 203 LISAGRDKVVNLWDL 217
L S DK V +WDL
Sbjct: 329 LYSGAEDKTVKIWDL 343
Score = 175 (66.7 bits), Expect = 3.2e-10, P = 3.2e-10
Identities = 48/156 (30%), Positives = 82/156 (52%)
Query: 25 LVVSSDGS-FIACACGE--SINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHS 81
+V + DGS FI A G+ +I D + + T I LA++PD + L + +
Sbjct: 193 VVFTPDGSQFITGAIGQDRTIKFWDANTFELLGTSPQQPGFINGLAVTPDGRKLVGAVRN 252
Query: 82 REIRVWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFK 141
++ W+L+ K L S +G +A P+ +ATA + ++++D+ G +
Sbjct: 253 F-VKAWNLADAKELFSVRGPSLEINTIAVSPNNRWVATANKEGTIMIFDLANGKQVTTLR 311
Query: 142 GHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLA 177
GH+G V S+ F PD + L+SG++D TV++WDL A
Sbjct: 312 GHQGWVLSLAFSPDGNT--LYSGAEDKTVKIWDLSA 345
Score = 151 (58.2 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 65/303 (21%), Positives = 121/303 (39%)
Query: 347 KRLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCA 406
+ L G+ I L + + +YLAVAT Q+ + DL++ Y + S + D
Sbjct: 55 ENLSGFQGIITALN-ITPDGKYLAVATADNQITLIDLANQEVVY--SQRSPVNNFADLAI 111
Query: 407 LSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTI 466
+ G+ L + DN+V + V GH V VAFS + + D TI
Sbjct: 112 SADGQWLAIAA--DNNVDVRRVRDGMRVETLVGHTDKVSGVAFSPDGETIVSVSGGDRTI 169
Query: 467 KVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGS--QDRTACVWRLP 524
++W + S + Q + A + S+ P+ S TG+ QDRT W
Sbjct: 170 RIW--ERASGNLIQTL--------ADNLGPTTSVVFTPDGSQFITGAIGQDRTIKFWDAN 219
Query: 525 DLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRA 584
+ T I + +P + ++ A + +K W+++D L + G + +
Sbjct: 220 TFELLGTSPQQPGFINGLAVTPDGRKLVGAVRN-FVKAWNLADAKELFSVRGPSLEINTI 278
Query: 585 SFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALV 644
+ + + +G + ++ + G+ + T H+ + +LA +G D V
Sbjct: 279 AVSPNNRWVATANKEGTIMIFDLANGKQVTTLRGHQGWVLSLAFSPDGNTLYSGAEDKTV 338
Query: 645 NLW 647
+W
Sbjct: 339 KIW 341
Score = 132 (51.5 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 32/121 (26%), Positives = 60/121 (49%)
Query: 11 GCEPVLQQFYGGGPLVVSSDGSFIACACGESINIVDLSNASIKSTIEGGSDTITALALSP 70
G P F G L V+ DG + A + +L++A ++ G S I +A+SP
Sbjct: 225 GTSPQQPGFING--LAVTPDGRKLVGAVRNFVKAWNLADAKELFSVRGPSLEINTIAVSP 282
Query: 71 DDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWD 130
+++ + ++ I ++DL+ K + + +GH G + +A P G L + D+ V +WD
Sbjct: 283 NNRWVATANKEGTIMIFDLANGKQVTTLRGHQGWVLSLAFSPDGNTLYSGAEDKTVKIWD 342
Query: 131 V 131
+
Sbjct: 343 L 343
Score = 102 (41.0 bits), Expect = 2.0e-19, Sum P(2) = 2.0e-19
Identities = 28/98 (28%), Positives = 51/98 (52%)
Query: 378 VQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVG 437
V+ ++L+ + + G S L ++T A+S + T +K+ ++ ++D + V
Sbjct: 254 VKAWNLADAKELFSVRGPS---LEINTIAVSPNNRWVATANKEGTIMIFDLANGKQVTTL 310
Query: 438 TGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLS 475
GH G V ++AFS N L SG+ D T+K+W L+
Sbjct: 311 RGHQGWVLSLAFSPD-GNTLYSGAEDKTVKIWDLSALA 347
Score = 61 (26.5 bits), Expect = 1.1e-13, Sum P(2) = 1.1e-13
Identities = 26/113 (23%), Positives = 54/113 (47%)
Query: 415 VTGSKDNSVRLWD-SESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDG 473
+ G+ N V+ W+ ++++ V G + +A S ++ + + + TI + FD
Sbjct: 246 LVGAVRNFVKAWNLADAKELFSV-RGPSLEINTIAVSPN-NRWVATANKEGTIMI--FD- 300
Query: 474 LSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDL 526
L+ N K + H + SLA +P+ + + +G++D+T +W L L
Sbjct: 301 LA-------NGKQVTTLRGHQGWVLSLAFSPDGNTLYSGAEDKTVKIWDLSAL 346
>UNIPROTKB|E1C8E9 [details] [associations]
symbol:TAF5L "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0003713 "transcription coactivator activity"
evidence=IEA] [GO:0004402 "histone acetyltransferase activity"
evidence=IEA] [GO:0030914 "STAGA complex" evidence=IEA] [GO:0033276
"transcription factor TFTC complex" evidence=IEA] [GO:0043966
"histone H3 acetylation" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0003713 GO:GO:0043966 GO:GO:0004402
GO:GO:0030914 GO:GO:0033276 GeneTree:ENSGT00700000104377
OMA:YVDSEGP EMBL:AADN02035649 EMBL:AADN02035650 IPI:IPI00584483
ProteinModelPortal:E1C8E9 Ensembl:ENSGALT00000018081 Uniprot:E1C8E9
Length = 560
Score = 252 (93.8 bits), Expect = 2.1e-19, Sum P(2) = 2.1e-19
Identities = 65/227 (28%), Positives = 106/227 (46%)
Query: 391 VLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFS 450
+L GH V + SSG +++ S+D S+R WD S + GH V + S
Sbjct: 337 ILRGHCGPVYSTRFLSDSSG---LLSCSEDMSIRYWDLRSFTNTVLYQGHAYPVWDLDIS 393
Query: 451 KKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVC 510
+ S S D T ++WSFD P+ + A H D++ + PN + +
Sbjct: 394 P-CSLYFASASHDRTARLWSFD-----RTYPLR-----IYAGHLLDVDCVKFHPNSNYLA 442
Query: 511 TGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSC 570
TGS D+T +W SV F GH+ + ++ FSP + + +A D+ +K+W ++ G+
Sbjct: 443 TGSTDKTVRLWSTQQGNSVRLFTGHRGPVLALAFSPNGKYLASAGEDQRLKLWDLASGTL 502
Query: 571 LKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYD 617
K GHT ++ +F + I S D V++W +R C A D
Sbjct: 503 YKELRGHTDNITSLTFSPDSSLIASASMDNSVRVWDIRNTYCNAPAD 549
Score = 238 (88.8 bits), Expect = 1.2e-16, P = 1.2e-16
Identities = 57/195 (29%), Positives = 89/195 (45%)
Query: 29 SDGS-FIACACGESINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRVW 87
SD S ++C+ SI DL + + +G + + L +SP S+ H R R+W
Sbjct: 352 SDSSGLLSCSEDMSIRYWDLRSFTNTVLYQGHAYPVWDLDISPCSLYFASASHDRTARLW 411
Query: 88 DLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVV 147
LR + GH + HP+ LAT D+ V +W G F GH+G V
Sbjct: 412 SFDRTYPLRIYAGHLLDVDCVKFHPNSNYLATGSTDKTVRLWSTQQGNSVRLFTGHRGPV 471
Query: 148 SSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAG 207
++ F P+ L S +D +++WDL + L H +TS+ + D S + SA
Sbjct: 472 LALAFSPNG--KYLASAGEDQRLKLWDLASGTLYKELRGHTDNITSLTFSPDSSLIASAS 529
Query: 208 RDKVVNLWDLRDYSC 222
D V +WD+R+ C
Sbjct: 530 MDNSVRVWDIRNTYC 544
Score = 224 (83.9 bits), Expect = 2.9e-16, Sum P(2) = 2.9e-16
Identities = 55/209 (26%), Positives = 88/209 (42%)
Query: 439 GHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDIN 498
GH G V + F L+S S D +I+ W ++ + H +
Sbjct: 340 GHCGPVYSTRFLSDSSG-LLSCSEDMSIRYWDLRSFTNTV----------LYQGHAYPVW 388
Query: 499 SLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDK 558
L ++P + S DRTA +W + + GH + V+F P + T S DK
Sbjct: 389 DLDISPCSLYFASASHDRTARLWSFDRTYPLRIYAGHLLDVDCVKFHPNSNYLATGSTDK 448
Query: 559 TIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDK 618
T+++WS G+ ++ F GH VL +F G + S G D +KLW + +G
Sbjct: 449 TVRLWSTQQGNSVRLFTGHRGPVLALAFSPNGKYLASAGEDQRLKLWDLASGTLYKELRG 508
Query: 619 HEDKIWALAVGKKTEMFATGGSDALVNLW 647
H D I +L + + A+ D V +W
Sbjct: 509 HTDNITSLTFSPDSSLIASASMDNSVRVW 537
Score = 220 (82.5 bits), Expect = 8.1e-16, Sum P(2) = 8.1e-16
Identities = 58/236 (24%), Positives = 113/236 (47%)
Query: 347 KRLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCA 406
K L G+ + +FL + L+ + ++ ++ +DL S + + + GH+ V LD
Sbjct: 336 KILRGHCGPVYSTRFLSDSSGLLSCSEDMS-IRYWDLRSFTNTVLYQGHAYPVWDLD--- 391
Query: 407 LSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTI 466
+S + + S D + RLW + + + GH+ V V F N+L +GS+D T+
Sbjct: 392 ISPCSLYFASASHDRTARLWSFDRTYPLRIYAGHLLDVDCVKFHPN-SNYLATGSTDKTV 450
Query: 467 KVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDL 526
++WS +Q +++ + H + +LA +PN + + +D+ +W L
Sbjct: 451 RLWS-------TQQGNSVR---LFTGHRGPVLALAFSPNGKYLASAGEDQRLKLWDLASG 500
Query: 527 VSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVL 582
RGH I S+ FSP ++ +AS D ++++W I + C +G +S ++
Sbjct: 501 TLYKELRGHTDNITSLTFSPDSSLIASASMDNSVRVWDIRNTYCNAPADGSSSELV 556
Score = 195 (73.7 bits), Expect = 6.0e-12, P = 6.0e-12
Identities = 40/132 (30%), Positives = 68/132 (51%)
Query: 63 ITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGA 122
+ + P+ L + + +R+W +R + GH GP + +A P+G LA+AG
Sbjct: 429 VDCVKFHPNSNYLATGSTDKTVRLWSTQQGNSVRLFTGHRGPVLALAFSPNGKYLASAGE 488
Query: 123 DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVA 182
D+++ +WD+ G +GH ++S+ F PD+ SL+ S S D +VRVWD+ C A
Sbjct: 489 DQRLKLWDLASGTLYKELRGHTDNITSLTFSPDS--SLIASASMDNSVRVWDIRNTYCNA 546
Query: 183 TLDKHFSRVTSM 194
D S + +
Sbjct: 547 PADGSSSELVGV 558
Score = 192 (72.6 bits), Expect = 1.3e-11, P = 1.3e-11
Identities = 51/184 (27%), Positives = 77/184 (41%)
Query: 34 IACACGESINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLK 93
+AC + D S + + G + + D L S IR WDL +
Sbjct: 316 LACDILDEEEEEDDSAGTEMKILRGHCGPVYSTRFLSDSSGLLSCSEDMSIRYWDLRSFT 375
Query: 94 CLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFH 153
++GH P + P A+A DR +W D + + GH V + FH
Sbjct: 376 NTVLYQGHAYPVWDLDISPCSLYFASASHDRTARLWSFDRTYPLRIYAGHLLDVDCVKFH 435
Query: 154 PDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVN 213
P+++ L +GS D TVR+W V H V ++A + +G L SAG D+ +
Sbjct: 436 PNSN--YLATGSTDKTVRLWSTQQGNSVRLFTGHRGPVLALAFSPNGKYLASAGEDQRLK 493
Query: 214 LWDL 217
LWDL
Sbjct: 494 LWDL 497
Score = 181 (68.8 bits), Expect = 1.6e-11, Sum P(2) = 1.6e-11
Identities = 41/177 (23%), Positives = 77/177 (43%)
Query: 472 DGLSDDAEQPMNLKAKA-VVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVV 530
D L ++ E+ + + ++ H + S + S + + S+D + W L + V
Sbjct: 319 DILDEEEEEDDSAGTEMKILRGHCGPVYSTRFLSDSSGLLSCSEDMSIRYWDLRSFTNTV 378
Query: 531 TFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRG 590
++GH +W ++ SP +AS D+T ++WS L+ + GH V F
Sbjct: 379 LYQGHAYPVWDLDISPCSLYFASASHDRTARLWSFDRTYPLRIYAGHLLDVDCVKFHPNS 438
Query: 591 AQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLW 647
+ + D V+LW+ + G + + H + ALA + A+ G D + LW
Sbjct: 439 NYLATGSTDKTVRLWSTQQGNSVRLFTGHRGPVLALAFSPNGKYLASAGEDQRLKLW 495
Score = 120 (47.3 bits), Expect = 0.00089, P = 0.00089
Identities = 26/86 (30%), Positives = 44/86 (51%)
Query: 25 LVVSSDGSFIACACGES--INIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSR 82
L S +G ++A A GE + + DL++ ++ + G +D IT+L SPD L+ S+
Sbjct: 474 LAFSPNGKYLASA-GEDQRLKLWDLASGTLYKELRGHTDNITSLTFSPDSSLIASASMDN 532
Query: 83 EIRVWDLSTLKCLRSWKGHDGPAIGM 108
+RVWD+ C G +G+
Sbjct: 533 SVRVWDIRNTYCNAPADGSSSELVGV 558
Score = 57 (25.1 bits), Expect = 2.1e-19, Sum P(2) = 2.1e-19
Identities = 15/64 (23%), Positives = 34/64 (53%)
Query: 136 CTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMA 195
C + F + ++++ P++ LL +G D++ V++W L +KK + + H V+ +
Sbjct: 260 CFYAFYNTEQLLNTAEISPNS--KLLAAGFDNSCVKLWSLRSKKLKS--EPHLVDVSRIR 315
Query: 196 ITSD 199
+ D
Sbjct: 316 LACD 319
Score = 47 (21.6 bits), Expect = 3.2e-15, Sum P(2) = 3.2e-15
Identities = 11/44 (25%), Positives = 20/44 (45%)
Query: 388 CSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESR 431
C Y ++ L+T +S L+ G ++ V+LW S+
Sbjct: 260 CFYAFYNTEQL---LNTAEISPNSKLLAAGFDNSCVKLWSLRSK 300
Score = 38 (18.4 bits), Expect = 1.5e-09, Sum P(2) = 1.5e-09
Identities = 7/17 (41%), Positives = 11/17 (64%)
Query: 452 KLQNFLVSGSSDHTIKV 468
+L+NFL S H+ +V
Sbjct: 76 RLRNFLTDSDSQHSHEV 92
>POMBASE|SPAC57A10.05c [details] [associations]
symbol:pof1 "F-box/WD repeat protein protein Pof1"
species:4896 "Schizosaccharomyces pombe" [GO:0005634 "nucleus"
evidence=IDA] [GO:0007346 "regulation of mitotic cell cycle"
evidence=IC] [GO:0019005 "SCF ubiquitin ligase complex"
evidence=IDA] [GO:0030674 "protein binding, bridging" evidence=IPI]
[GO:0042787 "protein ubiquitination involved in ubiquitin-dependent
protein catabolic process" evidence=IPI] [GO:0071276 "cellular
response to cadmium ion" evidence=IEP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
Pfam:PF00400 Pfam:PF00646 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 PomBase:SPAC57A10.05c
GO:GO:0005634 GO:GO:0007346 EMBL:CU329670 GenomeReviews:CU329670_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0071276 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0019005 GO:GO:0042787
HOGENOM:HOG000166480 KO:K10259 OrthoDB:EOG496313 EMBL:AB032410
PIR:T38932 RefSeq:NP_593310.1 ProteinModelPortal:P87053
IntAct:P87053 STRING:P87053 EnsemblFungi:SPAC57A10.05c.1
GeneID:2542914 KEGG:spo:SPAC57A10.05c NextBio:20803951
Uniprot:P87053
Length = 605
Score = 263 (97.6 bits), Expect = 2.5e-19, P = 2.5e-19
Identities = 66/235 (28%), Positives = 110/235 (46%)
Query: 413 LIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFD 472
++ +GS D ++RLW+ + V + GH V + F Q L+SGS D TI++W++
Sbjct: 285 ILASGSYDATIRLWNLATFQQVALLEGHSSGVTCLQFD---QCKLISGSMDKTIRIWNYR 341
Query: 473 GLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTF 532
++ + HG + L + + +L+ +GS D T +W +T
Sbjct: 342 ------------TSECISILHGHTDSVLCLTFDSTLLVSGSADCTVKLWHFSG-GKRITL 388
Query: 533 RGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQ 592
RGH + SV +V++ S D TIKIWS+ +CL TF H V S ++
Sbjct: 389 RGHTGPVNSVRIIRDRGLVLSGSDDSTIKIWSLETNTCLHTFSAHIGPV--QSLALADSR 446
Query: 593 IVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLW 647
+ SC DG +K W + +C+ T H + +W +A +G D +V +W
Sbjct: 447 LFSCSLDGTIKQWDIEKKKCVHTLFGHIEGVWEIAADHLR--LISGAHDGVVKVW 499
Score = 218 (81.8 bits), Expect = 2.1e-14, P = 2.1e-14
Identities = 61/228 (26%), Positives = 102/228 (44%)
Query: 12 CEPVLQQFYGGGPLVVSSDGSFIACACGES-INIVDLSNASIKSTIEGGSDTITALALSP 70
C V+ + G + + + +A ++ I + +L+ + +EG S +T L
Sbjct: 264 CRQVVLSGHSDGVMCLQLVRNILASGSYDATIRLWNLATFQQVALLEGHSSGVTCLQF-- 321
Query: 71 DDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWD 130
D L S + IR+W+ T +C+ GH + + + LL + AD V +W
Sbjct: 322 DQCKLISGSMDKTIRIWNYRTSECISILHGHTDSVLCLTFDST--LLVSGSADCTVKLWH 379
Query: 131 VDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSR 190
GG +GH G V+S+ D+ L+ SGSDD+T+++W L C+ T H
Sbjct: 380 FSGGKRIT-LRGHTGPVNSVRII--RDRGLVLSGSDDSTIKIWSLETNTCLHTFSAHIGP 436
Query: 191 VTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYEMVEAVCAI 238
V S+A+ S L S D + WD+ C T+ + +E V I
Sbjct: 437 VQSLALAD--SRLFSCSLDGTIKQWDIEKKKCVHTL--FGHIEGVWEI 480
Score = 214 (80.4 bits), Expect = 5.9e-14, P = 5.9e-14
Identities = 65/214 (30%), Positives = 102/214 (47%)
Query: 34 IACACGESINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLK 93
I+ + ++I I + + S + G +D++ L L+ D LL S +++W S K
Sbjct: 327 ISGSMDKTIRIWNYRTSECISILHGHTDSV--LCLTFDSTLLVSGSADCTVKLWHFSGGK 384
Query: 94 CLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFH 153
+ + +GH GP + GL+ + D + +W ++ C H F H G V S+
Sbjct: 385 RI-TLRGHTGPVNSVRIIRDRGLVLSGSDDSTIKIWSLETNTCLHTFSAHIGPVQSLAL- 442
Query: 154 PDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVN 213
D S LFS S D T++ WD+ KKCV TL H V +A +D LIS D VV
Sbjct: 443 --AD-SRLFSCSLDGTIKQWDIEKKKCVHTLFGHIEGVWEIA--ADHLRLISGAHDGVVK 497
Query: 214 LWDLRDYSCKLTVPTY-EMVEAV----CAIPPGS 242
+W+ + C T+ + E V +V C + GS
Sbjct: 498 VWEACE--CVHTLKNHSEPVTSVALGDCEVVSGS 529
Score = 192 (72.6 bits), Expect = 1.5e-11, P = 1.5e-11
Identities = 48/162 (29%), Positives = 78/162 (48%)
Query: 487 KAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSP 546
+ V++ H + L + N ++ +GS D T +W L V GH G+ ++F
Sbjct: 266 QVVLSGHSDGVMCLQLVRN--ILASGSYDATIRLWNLATFQQVALLEGHSSGVTCLQF-- 321
Query: 547 VDQV-VITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLW 605
DQ +I+ S DKTI+IW+ C+ GHT SVL +F +VS AD VKLW
Sbjct: 322 -DQCKLISGSMDKTIRIWNYRTSECISILHGHTDSVLCLTF--DSTLLVSGSADCTVKLW 378
Query: 606 TVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLW 647
G+ I T H + ++ + + + +G D+ + +W
Sbjct: 379 HFSGGKRI-TLRGHTGPVNSVRIIRDRGLVLSGSDDSTIKIW 419
Score = 176 (67.0 bits), Expect = 5.7e-17, Sum P(2) = 5.7e-17
Identities = 45/161 (27%), Positives = 75/161 (46%)
Query: 487 KAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSP 546
+ + H +NS+ + + LV +GS D T +W L + TF H + S+ +
Sbjct: 385 RITLRGHTGPVNSVRIIRDRGLVLSGSDDSTIKIWSLETNTCLHTFSAHIGPVQSLALA- 443
Query: 547 VDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWT 606
D + + S D TIK W I C+ T GH V + +++S DG+VK+W
Sbjct: 444 -DSRLFSCSLDGTIKQWDIEKKKCVHTLFGHIEGVWEIA--ADHLRLISGAHDGVVKVW- 499
Query: 607 VRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLW 647
EC+ T H + + ++A+G E+ +G D + LW
Sbjct: 500 -EACECVHTLKNHSEPVTSVALGD-CEV-VSGSEDGKIYLW 537
Score = 168 (64.2 bits), Expect = 6.1e-09, P = 6.1e-09
Identities = 39/135 (28%), Positives = 64/135 (47%)
Query: 516 RTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFE 575
R C WR VV GH G+ ++ V ++ + S D TI++W+++ + E
Sbjct: 254 RVECNWRHGRCRQVV-LSGHSDGVMCLQL--VRNILASGSYDATIRLWNLATFQQVALLE 310
Query: 576 GHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMF 635
GH+S V F +++S D +++W RT ECI+ H D + L + +
Sbjct: 311 GHSSGVTCLQF--DQCKLISGSMDKTIRIWNYRTSECISILHGHTDSVLCLTFD--STLL 366
Query: 636 ATGGSDALVNLWHDS 650
+G +D V LWH S
Sbjct: 367 VSGSADCTVKLWHFS 381
Score = 139 (54.0 bits), Expect = 8.6e-06, P = 8.6e-06
Identities = 39/161 (24%), Positives = 84/161 (52%)
Query: 316 NQGLLCVTADQQLLLYTTVEVPEKKMELILSKR---LVGYNEEILDLKFLGEEEQYLAVA 372
+ G++C+ + +L + + + L ++ L G++ + L+F +Q ++
Sbjct: 273 SDGVMCLQLVRNILASGSYDATIRLWNLATFQQVALLEGHSSGVTCLQF----DQCKLIS 328
Query: 373 TNIEQ-VQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESR 431
++++ +++++ + C +L GH++ VLCL + L+V+GS D +V+LW
Sbjct: 329 GSMDKTIRIWNYRTSECISILHGHTDSVLCL-----TFDSTLLVSGSADCTVKLWHFSGG 383
Query: 432 CCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFD 472
+ + GH G V +V + + ++SGS D TIK+WS +
Sbjct: 384 KRITL-RGHTGPVNSVRIIRD-RGLVLSGSDDSTIKIWSLE 422
Score = 139 (54.0 bits), Expect = 8.6e-06, P = 8.6e-06
Identities = 80/283 (28%), Positives = 128/283 (45%)
Query: 158 KSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDL 217
+++L SGS DAT+R+W+L + VA L+ H S VT + D LIS DK + +W+
Sbjct: 283 RNILASGSYDATIRLWNLATFQQVALLEGHSSGVTCLQF--DQCKLISGSMDKTIRIWNY 340
Query: 218 RDYSCKLTVPTYEMVEAVCAIPPGSAFDSFL--SSYNQQTIKK------KRRSLEIHFIT 269
R C +++ + ++V + FDS L S T+K KR +L H
Sbjct: 341 RTSEC-ISI-LHGHTDSVLCL----TFDSTLLVSGSADCTVKLWHFSGGKRITLRGHTGP 394
Query: 270 VGERGIVRMWNADSACLYEQKSSDVTI---SFEMDDSKRGFTAATVLPSNQGLLCVTADQ 326
V I+R D L S D TI S E + F+A + P Q L AD
Sbjct: 395 VNSVRIIR----DRG-LVLSGSDDSTIKIWSLETNTCLHTFSAH-IGPV-QSL--ALADS 445
Query: 327 QLLLYTTVEVPEKKMELILSK---RLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDL 383
+L +++ K+ ++ K L G+ E + ++ + L + V+V++
Sbjct: 446 RLFS-CSLDGTIKQWDIEKKKCVHTLFGHIEGVWEI---AADHLRLISGAHDGVVKVWE- 500
Query: 384 SSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLW 426
+ C + L HSE V + AL G +V+GS+D + LW
Sbjct: 501 -ACECVHTLKNHSEPVTSV---AL--GDCEVVSGSEDGKIYLW 537
Score = 116 (45.9 bits), Expect = 5.7e-17, Sum P(2) = 5.7e-17
Identities = 28/81 (34%), Positives = 46/81 (56%)
Query: 391 VLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFS 450
VL+GHS+ V+CL + ++ +GS D ++RLW+ + V + GH V + F
Sbjct: 268 VLSGHSDGVMCLQLV-----RNILASGSYDATIRLWNLATFQQVALLEGHSSGVTCLQFD 322
Query: 451 KKLQNFLVSGSSDHTIKVWSF 471
Q L+SGS D TI++W++
Sbjct: 323 ---QCKLISGSMDKTIRIWNY 340
>RGD|2323942 [details] [associations]
symbol:Poc1b "POC1 centriolar protein homolog B (Chlamydomonas)"
species:10116 "Rattus norvegicus" [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=IEA;ISO] [GO:0005932 "microtubule basal body"
evidence=IEA;ISO] [GO:0042384 "cilium assembly" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:2323942 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 OrthoDB:EOG41VK2R IPI:IPI00387818
ProteinModelPortal:D3ZW91 Ensembl:ENSRNOT00000031905
UCSC:RGD:2323942 ArrayExpress:D3ZW91 Uniprot:D3ZW91
Length = 477
Score = 260 (96.6 bits), Expect = 2.6e-19, P = 2.6e-19
Identities = 81/307 (26%), Positives = 134/307 (43%)
Query: 344 ILSKRLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLD 403
IL + G+ I F +Q +A A+ + ++ L + +Y GH ++V L
Sbjct: 9 ILERYFKGHKAAITSADFSPNCKQ-IATASWDTFLMLWSLKPHARAYRYVGHKDVVTSLQ 67
Query: 404 TCALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSD 463
S L+ + S+D +VRLW + + H V +V FS Q FLV+ S D
Sbjct: 68 ---FSPQGNLLASASRDKTVRLWVLDRKGKSSEFKAHTAPVRSVDFSADGQ-FLVTASED 123
Query: 464 HTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRL 523
+IKVWS + + H + +P+ L+ + S+D+T +W
Sbjct: 124 KSIKVWSM----------YRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDT 173
Query: 524 PDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLR 583
V F V+FSP + +A D ++IW I L+ ++ H+ V
Sbjct: 174 TSKQCVNNFSDSVGFANFVDFSPNGTCIASAGSDHAVRIWDIRMNRLLQHYQVHSCGVNC 233
Query: 584 ASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDAL 643
SF G +V+ +DG VK+ + G I T H ++ ++ K E+F +GG+DA
Sbjct: 234 LSFHPSGNSLVTASSDGTVKILDLVEGRLIYTLQGHTGPVFTVSFSKDGELFTSGGADAQ 293
Query: 644 VNLWHDS 650
V +W S
Sbjct: 294 VLVWRTS 300
Score = 226 (84.6 bits), Expect = 1.6e-15, P = 1.6e-15
Identities = 50/189 (26%), Positives = 94/189 (49%)
Query: 28 SSDGSFIACACGE-SINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRV 86
S+DG F+ A + SI + + ++ + + SPD +L+ S + I++
Sbjct: 111 SADGQFLVTASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKI 170
Query: 87 WDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGV 146
WD ++ +C+ ++ G A + P+G +A+AG+D V +WD+ +++ H
Sbjct: 171 WDTTSKQCVNNFSDSVGFANFVDFSPNGTCIASAGSDHAVRIWDIRMNRLLQHYQVHSCG 230
Query: 147 VSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISA 206
V+ + FHP + L + S D TV++ DL+ + + TL H V +++ + DG S
Sbjct: 231 VNCLSFHPSGNS--LVTASSDGTVKILDLVEGRLIYTLQGHTGPVFTVSFSKDGELFTSG 288
Query: 207 GRDKVVNLW 215
G D V +W
Sbjct: 289 GADAQVLVW 297
Score = 210 (79.0 bits), Expect = 9.6e-14, P = 9.6e-14
Identities = 56/212 (26%), Positives = 95/212 (44%)
Query: 13 EPVLQQFYGGGPLVVSS-DGS----FIACACGESINIV-DLSNASIKSTIEGGSDTITAL 66
+P+L++++ G ++S D S IA A ++ ++ L + G D +T+L
Sbjct: 7 DPILERYFKGHKAAITSADFSPNCKQIATASWDTFLMLWSLKPHARAYRYVGHKDVVTSL 66
Query: 67 ALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKV 126
SP LL S+ + +R+W L +K H P + G L TA D+ +
Sbjct: 67 QFSPQGNLLASASRDKTVRLWVLDRKGKSSEFKAHTAPVRSVDFSADGQFLVTASEDKSI 126
Query: 127 LVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDK 186
VW + + H V F PD L+ S S+D T+++WD +K+CV
Sbjct: 127 KVWSMYRQRFLYSLYRHTHWVRCAKFSPDG--RLIVSCSEDKTIKIWDTTSKQCVNNFSD 184
Query: 187 HFSRVTSMAITSDGSTLISAGRDKVVNLWDLR 218
+ + +G+ + SAG D V +WD+R
Sbjct: 185 SVGFANFVDFSPNGTCIASAGSDHAVRIWDIR 216
Score = 192 (72.6 bits), Expect = 9.3e-12, P = 9.3e-12
Identities = 43/166 (25%), Positives = 75/166 (45%)
Query: 57 EGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPSGGL 116
+G IT+ SP+ K + ++ + +W L + GH + P G L
Sbjct: 15 KGHKAAITSADFSPNCKQIATASWDTFLMLWSLKPHARAYRYVGHKDVVTSLQFSPQGNL 74
Query: 117 LATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLL 176
LA+A D+ V +W +D + FK H V S+ F D L + S+D +++VW +
Sbjct: 75 LASASRDKTVRLWVLDRKGKSSEFKAHTAPVRSVDF--SADGQFLVTASEDKSIKVWSMY 132
Query: 177 AKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSC 222
++ + +L +H V + DG ++S DK + +WD C
Sbjct: 133 RQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTSKQC 178
>UNIPROTKB|Q9NVX2 [details] [associations]
symbol:NLE1 "Notchless protein homolog 1" species:9606
"Homo sapiens" [GO:0001826 "inner cell mass cell differentiation"
evidence=IEA] [GO:0007219 "Notch signaling pathway" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219 PRINTS:PR00319
GO:GO:0001826 HOGENOM:HOG000091641 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 CTD:54475 HOVERGEN:HBG007602
OrthoDB:EOG4BCDMS EMBL:AK001320 EMBL:AB209111 EMBL:AC022916
EMBL:BC002884 EMBL:BC012075 EMBL:AJ005257 IPI:IPI00018196
IPI:IPI00556116 RefSeq:NP_001014445.1 RefSeq:NP_060566.2
UniGene:Hs.85570 ProteinModelPortal:Q9NVX2 SMR:Q9NVX2 IntAct:Q9NVX2
MINT:MINT-1474299 STRING:Q9NVX2 PhosphoSite:Q9NVX2 DMDM:296439488
SWISS-2DPAGE:Q9NVX2 PaxDb:Q9NVX2 PRIDE:Q9NVX2
Ensembl:ENST00000360831 Ensembl:ENST00000442241 GeneID:54475
KEGG:hsa:54475 UCSC:uc002hiy.1 UCSC:uc002hiz.1
GeneCards:GC17M033458 HGNC:HGNC:19889 HPA:HPA018807
neXtProt:NX_Q9NVX2 PharmGKB:PA142671263 GenomeRNAi:54475
NextBio:56780 ArrayExpress:Q9NVX2 Bgee:Q9NVX2 CleanEx:HS_NLE1
Genevestigator:Q9NVX2 GermOnline:ENSG00000073536 Uniprot:Q9NVX2
Length = 485
Score = 245 (91.3 bits), Expect = 1.3e-17, P = 1.3e-17
Identities = 71/309 (22%), Positives = 141/309 (45%)
Query: 345 LSKRLVGYNEEILDLKF----LGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVL 400
+ + L G+++ I L + E +Y+A ++ V+++D ++ C +L GH++ V
Sbjct: 191 VGRTLAGHSKWITGLSWEPLHANPECRYVASSSKDGSVRIWDTTAGRCERILTGHTQSVT 250
Query: 401 CLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSG 460
CL G L+ + S+D ++++W + GH V +A S
Sbjct: 251 CLRW----GGDGLLYSASQDRTIKVWRAHDGVLCRTLQGHGHWVNTMALS---------- 296
Query: 461 SSDHTIKVWSFDGLSDDAEQPMNLKAKAV-VAAHGKDINSLAVAPNDSLVCTGSQDRTAC 519
+D+ ++ +F+ ++ + P +L+ + +L + +GS D T
Sbjct: 297 -TDYALRTGAFEP-AEASVNPQDLQGSLQELKERALSRYNLVRGQGPERLVSGSDDFTLF 354
Query: 520 VWR-LPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHT 578
+W D + GH+ I V FSP ++V +AS DK+IK+W G L + GH
Sbjct: 355 LWSPAEDKKPLTRMTGHQALINQVLFSPDSRIVASASFDKSIKLWDGRTGKYLASLRGHV 414
Query: 579 SSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATG 638
++V + ++ +VS +D +K+W V+ + H D+++A+ + A+G
Sbjct: 415 AAVYQIAWSADSRLLVSGSSDSTLKVWDVKAQKLAMDLPGHADEVYAVDWSPDGQRVASG 474
Query: 639 GSDALVNLW 647
G D + +W
Sbjct: 475 GKDKCLRIW 483
Score = 233 (87.1 bits), Expect = 2.9e-16, P = 2.9e-16
Identities = 88/387 (22%), Positives = 167/387 (43%)
Query: 54 STIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPS 113
S++EG S+ + ++A SP K L S +R WDLST + KGH + ++ P
Sbjct: 108 SSLEGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHFTCKGHRHWVLSISWSPD 167
Query: 114 GGLLATAGADRKVLVWDVDGGFCT-HYFKGHKGVVSSILFHP---DTDKSLLFSGSDDAT 169
G LA+ + ++L+WD G GH ++ + + P + + + S S D +
Sbjct: 168 GRKLASGCKNGQILLWDPSTGKQVGRTLAGHSKWITGLSWEPLHANPECRYVASSSKDGS 227
Query: 170 VRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRD-YSCKLTVPT 228
VR+WD A +C L H VT + DG L SA +D+ + +W D C+
Sbjct: 228 VRIWDTTAGRCERILTGHTQSVTCLRWGGDG-LLYSASQDRTIKVWRAHDGVLCRTLQGH 286
Query: 229 YEMVEAVC-----AIPPGSAFDSFLSSYNQQTIKKKRRSLEIHFITVGERGIVRMWNADS 283
V + A+ G AF+ +S N Q ++ + L+ ++ +VR +
Sbjct: 287 GHWVNTMALSTDYALRTG-AFEPAEASVNPQDLQGSLQELKERALS--RYNLVRGQGPER 343
Query: 284 ACLYEQKSSDVTIS-FEMDDSKRGFTAATVLPSNQGLLCVTADQQLLLYTTVEVPEKKME 342
S D T+ + + K+ T T + + + D +++ + + K +
Sbjct: 344 LV---SGSDDFTLFLWSPAEDKKPLTRMTGHQALINQVLFSPDSRIVASASFDKSIKLWD 400
Query: 343 LILSKRLV---GYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIV 399
K L G+ + + + + + L ++ ++V+D+ + + L GH++ V
Sbjct: 401 GRTGKYLASLRGHVAAVYQIAW-SADSRLLVSGSSDSTLKVWDVKAQKLAMDLPGHADEV 459
Query: 400 LCLDTCALSSGKILIVTGSKDNSVRLW 426
+D G+ + +G KD +R+W
Sbjct: 460 YAVDWSP--DGQ-RVASGGKDKCLRIW 483
Score = 202 (76.2 bits), Expect = 7.7e-13, P = 7.7e-13
Identities = 100/398 (25%), Positives = 175/398 (43%)
Query: 93 KCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYF-KGHKGVVSSIL 151
+C S +GH I +A P+G LA+ D V WD+ H+ KGH+ V SI
Sbjct: 105 RCTSSLEGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTE-TPHFTCKGHRHWVLSIS 163
Query: 152 FHPDTDKSLLFSGSDDATVRVWDLLAKKCVA-TLDKHFSRVTSMA-----ITSDGSTLIS 205
+ PD K L SG + + +WD K V TL H +T ++ + + S
Sbjct: 164 WSPDGRK--LASGCKNGQILLWDPSTGKQVGRTLAGHSKWITGLSWEPLHANPECRYVAS 221
Query: 206 AGRDKVVNLWDLRDYSCKLTVPTYEMVEAVCAIPPGSAFDSFLSSYNQ-QTIKKKR---- 260
+ +D V +WD C+ + + ++V + G D L S +Q +TIK R
Sbjct: 222 SSKDGSVRIWDTTAGRCERILTGH--TQSVTCLRWGG--DGLLYSASQDRTIKVWRAHDG 277
Query: 261 ---RSLEIHFITVGERGIVRMWNADSACLYEQKSSDVT---ISFEMDDSKRGFTAATVLP 314
R+L+ H V + + + +E + V + + + K + L
Sbjct: 278 VLCRTLQGHGHWVNTMALSTDYALRTGA-FEPAEASVNPQDLQGSLQELKERALSRYNLV 336
Query: 315 SNQG---LLCVTADQQLLLYTTVEVPEKKMELILSKRLVGYNEEILDLKFLGEEEQYLAV 371
QG L+ + D L L++ E +KK L+ R+ G+ I + F + + +A
Sbjct: 337 RGQGPERLVSGSDDFTLFLWSPAE--DKKP---LT-RMTGHQALINQVLF-SPDSRIVAS 389
Query: 372 ATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESR 431
A+ + ++++D + L GH V + A S+ L+V+GS D+++++WD +++
Sbjct: 390 ASFDKSIKLWDGRTGKYLASLRGH---VAAVYQIAWSADSRLLVSGSSDSTLKVWDVKAQ 446
Query: 432 CCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVW 469
GH V AV +S Q + SG D +++W
Sbjct: 447 KLAMDLPGHADEVYAVDWSPDGQR-VASGGKDKCLRIW 483
Score = 179 (68.1 bits), Expect = 2.6e-19, Sum P(2) = 2.6e-19
Identities = 51/179 (28%), Positives = 85/179 (47%)
Query: 28 SSDGSFIACACGES-INIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRV 86
S G ++A G++ + DLS + T +G + +++ SPD + L S + +I +
Sbjct: 123 SPTGKYLASGSGDTTVRFWDLSTETPHFTCKGHRHWVLSISWSPDGRKLASGCKNGQILL 182
Query: 87 WDLSTLKCL-RSWKGHDGPAIGMA-----CHPSGGLLATAGADRKVLVWDVDGGFCTHYF 140
WD ST K + R+ GH G++ +P +A++ D V +WD G C
Sbjct: 183 WDPSTGKQVGRTLAGHSKWITGLSWEPLHANPECRYVASSSKDGSVRIWDTTAGRCERIL 242
Query: 141 KGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSD 199
GH V+ + + D LL+S S D T++VW TL H V +MA+++D
Sbjct: 243 TGHTQSVTCLRWGGD---GLLYSASQDRTIKVWRAHDGVLCRTLQGHGHWVNTMALSTD 298
Score = 138 (53.6 bits), Expect = 7.9e-06, P = 7.9e-06
Identities = 45/170 (26%), Positives = 78/170 (45%)
Query: 489 VVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVT-FRGHKRGIWSVEFSPV 547
+V++ GK + S AV + ++ Q + ++R+ + + GH + SV FSP
Sbjct: 69 IVSSLGKTLESQAVE-TEKVLDIIYQPQA--IFRVRAVTRCTSSLEGHSEAVISVAFSPT 125
Query: 548 DQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTV 607
+ + + SGD T++ W +S + T +GH VL S+ G ++ S +G + LW
Sbjct: 126 GKYLASGSGDTTVRFWDLSTETPHFTCKGHRHWVLSISWSPDGRKLASGCKNGQILLWDP 185
Query: 608 RTGECIA-TYDKHEDKI----WA-LAVGKKTEMFATGGSDALVNLWHDST 651
TG+ + T H I W L + A+ D V +W D+T
Sbjct: 186 STGKQVGRTLAGHSKWITGLSWEPLHANPECRYVASSSKDGSVRIW-DTT 234
Score = 132 (51.5 bits), Expect = 2.6e-19, Sum P(2) = 2.6e-19
Identities = 35/131 (26%), Positives = 63/131 (48%)
Query: 392 LAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSK 451
+ GH ++ + S ++ + S D S++LWD + + GH+ AV +A+S
Sbjct: 368 MTGHQALI---NQVLFSPDSRIVASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSA 424
Query: 452 KLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCT 511
LVSGSSD T+KVW D Q + + + H ++ ++ +P+ V +
Sbjct: 425 D-SRLLVSGSSDSTLKVW------DVKAQKLAMD----LPGHADEVYAVDWSPDGQRVAS 473
Query: 512 GSQDRTACVWR 522
G +D+ +WR
Sbjct: 474 GGKDKCLRIWR 484
>UNIPROTKB|A5PKH9 [details] [associations]
symbol:WDR51B "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0042384 "cilium assembly" evidence=IEA] [GO:0005932
"microtubule basal body" evidence=IEA] [GO:0005814 "centriole"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 HOVERGEN:HBG057502 KO:K16482
HOGENOM:HOG000036743 CTD:282809 OMA:TASWDTF EMBL:DAAA02012678
EMBL:BC142494 IPI:IPI00690736 RefSeq:NP_001092501.1
UniGene:Bt.54889 Ensembl:ENSBTAT00000000919 GeneID:525136
KEGG:bta:525136 InParanoid:A5PKH9 NextBio:20874107 Uniprot:A5PKH9
Length = 478
Score = 260 (96.6 bits), Expect = 2.6e-19, P = 2.6e-19
Identities = 75/304 (24%), Positives = 134/304 (44%)
Query: 344 ILSKRLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLD 403
+L + G+ I + F +Q LA + + ++ L + ++ GH +++ +
Sbjct: 9 VLERYFKGHKAAITSVDFSPNGKQ-LATGSWDTFLMLWSLRPQARAFRYVGHKDVITSVQ 67
Query: 404 TCALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSD 463
L + L+ + S+D ++RLW + R H V +V FS Q FL S S D
Sbjct: 68 FSPLGN---LLASASRDRTIRLWIPDKRGKSSEFKAHTAPVRSVDFSADGQ-FLASASED 123
Query: 464 HTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRL 523
+IKVW+ + + H + +P+ L+ + S+D+T +W
Sbjct: 124 KSIKVWNM----------YRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDT 173
Query: 524 PDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLR 583
+ V F V F+P + +A D T+KIW I L+ ++ H+ V
Sbjct: 174 TNKQCVNNFSDFVGFANFVAFNPNGTCIASAGSDHTVKIWDIRVNKLLQHYQVHSGGVNC 233
Query: 584 ASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDAL 643
SF G +++ +DG +K+ + G I T H ++ ++ K E+F +GG+DA
Sbjct: 234 VSFHPSGNYLITASSDGTLKILDLLEGRLIYTLQGHTGPVFTVSFSKGGELFTSGGADAQ 293
Query: 644 VNLW 647
V LW
Sbjct: 294 VLLW 297
Score = 244 (91.0 bits), Expect = 1.6e-17, P = 1.6e-17
Identities = 53/189 (28%), Positives = 97/189 (51%)
Query: 28 SSDGSFIACACGE-SINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRV 86
S+DG F+A A + SI + ++ ++ + + SPD +L+ S + I++
Sbjct: 111 SADGQFLASASEDKSIKVWNMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKI 170
Query: 87 WDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGV 146
WD + +C+ ++ G A +A +P+G +A+AG+D V +WD+ +++ H G
Sbjct: 171 WDTTNKQCVNNFSDFVGFANFVAFNPNGTCIASAGSDHTVKIWDIRVNKLLQHYQVHSGG 230
Query: 147 VSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISA 206
V+ + FHP + L + S D T+++ DLL + + TL H V +++ + G S
Sbjct: 231 VNCVSFHPSGN--YLITASSDGTLKILDLLEGRLIYTLQGHTGPVFTVSFSKGGELFTSG 288
Query: 207 GRDKVVNLW 215
G D V LW
Sbjct: 289 GADAQVLLW 297
Score = 208 (78.3 bits), Expect = 1.6e-13, P = 1.6e-13
Identities = 72/264 (27%), Positives = 113/264 (42%)
Query: 348 RLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCAL 407
R VG+ + I ++F LA A+ ++++ S H+ V +D A
Sbjct: 55 RYVGHKDVITSVQF-SPLGNLLASASRDRTIRLWIPDKRGKSSEFKAHTAPVRSVDFSA- 112
Query: 408 SSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIK 467
G+ L + S+D S+++W+ + + H V FS +VS S D TIK
Sbjct: 113 -DGQFL-ASASEDKSIKVWNMYRQRFLYSLYRHTHWVRCAKFSPD-GRLIVSCSEDKTIK 169
Query: 468 VWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLV 527
+W +Q +N + V A N +A PN + + + D T +W +
Sbjct: 170 IWDTTN-----KQCVNNFSDFVGFA-----NFVAFNPNGTCIASAGSDHTVKIWDIRVNK 219
Query: 528 SVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFL 587
+ ++ H G+ V F P +ITAS D T+KI + +G + T +GHT V SF
Sbjct: 220 LLQHYQVHSGGVNCVSFHPSGNYLITASSDGTLKILDLLEGRLIYTLQGHTGPVFTVSFS 279
Query: 588 TRGAQIVSCGADGLVKLWTVRTGE 611
G S GAD V LW E
Sbjct: 280 KGGELFTSGGADAQVLLWRTNFDE 303
Score = 206 (77.6 bits), Expect = 2.7e-13, P = 2.7e-13
Identities = 56/212 (26%), Positives = 94/212 (44%)
Query: 13 EPVLQQFYGGGPLVVSS-----DGSFIACACGESINIV-DLSNASIKSTIEGGSDTITAL 66
+PVL++++ G ++S +G +A ++ ++ L + G D IT++
Sbjct: 7 DPVLERYFKGHKAAITSVDFSPNGKQLATGSWDTFLMLWSLRPQARAFRYVGHKDVITSV 66
Query: 67 ALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKV 126
SP LL S+ R IR+W +K H P + G LA+A D+ +
Sbjct: 67 QFSPLGNLLASASRDRTIRLWIPDKRGKSSEFKAHTAPVRSVDFSADGQFLASASEDKSI 126
Query: 127 LVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDK 186
VW++ + H V F PD L+ S S+D T+++WD K+CV
Sbjct: 127 KVWNMYRQRFLYSLYRHTHWVRCAKFSPDG--RLIVSCSEDKTIKIWDTTNKQCVNNFSD 184
Query: 187 HFSRVTSMAITSDGSTLISAGRDKVVNLWDLR 218
+A +G+ + SAG D V +WD+R
Sbjct: 185 FVGFANFVAFNPNGTCIASAGSDHTVKIWDIR 216
Score = 195 (73.7 bits), Expect = 4.4e-12, P = 4.4e-12
Identities = 45/166 (27%), Positives = 76/166 (45%)
Query: 57 EGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPSGGL 116
+G IT++ SP+ K L + + +W L + GH + P G L
Sbjct: 15 KGHKAAITSVDFSPNGKQLATGSWDTFLMLWSLRPQARAFRYVGHKDVITSVQFSPLGNL 74
Query: 117 LATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLL 176
LA+A DR + +W D + FK H V S+ F D L S S+D +++VW++
Sbjct: 75 LASASRDRTIRLWIPDKRGKSSEFKAHTAPVRSVDF--SADGQFLASASEDKSIKVWNMY 132
Query: 177 AKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSC 222
++ + +L +H V + DG ++S DK + +WD + C
Sbjct: 133 RQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQC 178
Score = 176 (67.0 bits), Expect = 5.4e-10, P = 5.4e-10
Identities = 43/174 (24%), Positives = 73/174 (41%)
Query: 478 AEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKR 537
A P + + H I S+ +PN + TGS D +W L + GHK
Sbjct: 2 ASSPEDPVLERYFKGHKAAITSVDFSPNGKQLATGSWDTFLMLWSLRPQARAFRYVGHKD 61
Query: 538 GIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCG 597
I SV+FSP+ ++ +AS D+TI++W F+ HT+ V F G + S
Sbjct: 62 VITSVQFSPLGNLLASASRDRTIRLWIPDKRGKSSEFKAHTAPVRSVDFSADGQFLASAS 121
Query: 598 ADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLWHDST 651
D +K+W + + + +H + + + D + +W D+T
Sbjct: 122 EDKSIKVWNMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIW-DTT 174
Score = 165 (63.1 bits), Expect = 8.6e-09, P = 8.6e-09
Identities = 48/217 (22%), Positives = 92/217 (42%)
Query: 63 ITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGA 122
+ ++ S D + L S+ + I+VW++ + L S H P G L+ +
Sbjct: 105 VRSVDFSADGQFLASASEDKSIKVWNMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSE 164
Query: 123 DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVA 182
D+ + +WD C + F G + + F+P+ + + S D TV++WD+ K +
Sbjct: 165 DKTIKIWDTTNKQCVNNFSDFVGFANFVAFNPNG--TCIASAGSDHTVKIWDIRVNKLLQ 222
Query: 183 TLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYE-MVEAVCAIPPG 241
H V ++ G+ LI+A D + + DL + T+ + V V G
Sbjct: 223 HYQVHSGGVNCVSFHPSGNYLITASSDGTLKILDLLEGRLIYTLQGHTGPVFTVSFSKGG 282
Query: 242 SAFDSFLSSYNQQTIKKKRRSLEIHFITVGERGIVRM 278
F S + Q + + E+++ V +R + R+
Sbjct: 283 ELFTS--GGADAQVLLWRTNFDELNYKDVSKRNLKRL 317
>ZFIN|ZDB-GENE-040426-2903 [details] [associations]
symbol:fbxw11b "F-box and WD-40 domain protein
11b" species:7955 "Danio rerio" [GO:0046983 "protein dimerization
activity" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
ZFIN:ZDB-GENE-040426-2903 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383
HOGENOM:HOG000006638 HOVERGEN:HBG002521 KO:K03362 OrthoDB:EOG4F1X2M
GeneTree:ENSGT00690000101849 OMA:FDQWSEA EMBL:BX465186
EMBL:BC056809 IPI:IPI00494842 RefSeq:NP_998669.2 UniGene:Dr.75211
SMR:Q6PGW4 STRING:Q6PGW4 Ensembl:ENSDART00000019252 GeneID:406825
KEGG:dre:406825 CTD:406825 InParanoid:Q6PGW4 NextBio:20818332
Uniprot:Q6PGW4
Length = 527
Score = 257 (95.5 bits), Expect = 2.8e-19, Sum P(2) = 2.8e-19
Identities = 72/244 (29%), Positives = 119/244 (48%)
Query: 413 LIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFD 472
+IVTGS D++VR+WD S + H AV + F L +V+ S D +I VW
Sbjct: 277 VIVTGSSDSTVRVWDVNSGEVLNTLIHHNEAVLHLRFCNGL---MVTCSKDRSIAVW--- 330
Query: 473 GLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTF 532
D P ++ + V+ H +N V +D + + S DRT VW V T
Sbjct: 331 ----DMASPTDISLRRVLVGHRAAVN--VVDFDDKYIVSASGDRTIKVWSTSTCEFVRTL 384
Query: 533 RGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQ 592
GHKRGI +++ D++V++ S D TI++W I G+CL+ EGH V F + +
Sbjct: 385 NGHKRGIACLQYR--DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNK--R 440
Query: 593 IVSCGADGLVKLWTVRTGE---------CIATYDKHEDKIWALAVGKKTEMFATGGSDAL 643
IVS DG +K+W ++ C+ T +H +++ L + ++ ++ D +
Sbjct: 441 IVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQFDE-FQIISSSHDDTI 499
Query: 644 VNLW 647
+ +W
Sbjct: 500 L-IW 502
Score = 206 (77.6 bits), Expect = 3.3e-13, P = 3.3e-13
Identities = 57/205 (27%), Positives = 97/205 (47%)
Query: 30 DGSFIACACGESINIVDLSNA---SIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRV 86
+G + C+ SI + D+++ S++ + G + + DDK + S+ R I+V
Sbjct: 315 NGLMVTCSKDRSIAVWDMASPTDISLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKV 372
Query: 87 WDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGA-DRKVLVWDVDGGFCTHYFKGHKG 145
W ST + +R+ GH G+AC L +G+ D + +WD++ G C +GH+
Sbjct: 373 WSTSTCEFVRTLNGHKR---GIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEE 429
Query: 146 VVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKK---------CVATLDKHFSRVTSMAI 196
+V I F D + SG+ D ++VWDL A C+ TL +H RV +
Sbjct: 430 LVRCIRF----DNKRIVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQF 485
Query: 197 TSDGSTLISAGRDKVVNLWDLRDYS 221
D +IS+ D + +WD + S
Sbjct: 486 --DEFQIISSSHDDTILIWDFLNVS 508
Score = 184 (69.8 bits), Expect = 8.6e-11, P = 8.6e-11
Identities = 77/303 (25%), Positives = 133/303 (43%)
Query: 245 DSFLSSYNQQTIKK-KRRSLEIHFITVGERGIVRMWNADSACLYEQKSSDVTISFEMDDS 303
+ +S +IK +++LE I G G V D + SSD T+ + D
Sbjct: 236 EKIISGLRDNSIKIWDKQTLECLKILTGHTGSVLCLQYDERVIVTG-SSDSTV--RVWDV 292
Query: 304 KRGFTAATVLPSNQGLLCVTADQQLLLYTT----VEVPE--KKMELILSKRLVGYNEEIL 357
G T++ N+ +L + L++ + + V + ++ L + LVG+ +
Sbjct: 293 NSGEVLNTLIHHNEAVLHLRFCNGLMVTCSKDRSIAVWDMASPTDISLRRVLVGHRAAVN 352
Query: 358 DLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYV--LAGHSEIVLCLDTCALSSGKILIV 415
+ F +++Y+ A+ ++V+ S+ +C +V L GH + CL L+V
Sbjct: 353 VVDF---DDKYIVSASGDRTIKVW--STSTCEFVRTLNGHKRGIACLQY-----RDRLVV 402
Query: 416 TGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLS 475
+GS DN++RLWD E C+ V GH V + F K +VSG+ D IKVW
Sbjct: 403 SGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKR---IVSGAYDGKIKVWDLQAAL 459
Query: 476 DDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGH 535
D L + +V G+ + L ++ + + S D T +W D ++V T G
Sbjct: 460 DPRAPASTLCLRTLVEHSGR-VFRLQF--DEFQIISSSHDDTILIW---DFLNVST-NGQ 512
Query: 536 KRG 538
G
Sbjct: 513 TEG 515
Score = 161 (61.7 bits), Expect = 2.8e-08, P = 2.8e-08
Identities = 47/205 (22%), Positives = 87/205 (42%)
Query: 30 DGSFIACACGESINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWDL 89
D I+ SI I D + G + ++ L L D++++ + +RVWD+
Sbjct: 235 DEKIISGLRDNSIKIWDKQTLECLKILTGHTGSV--LCLQYDERVIVTGSSDSTVRVWDV 292
Query: 90 STLKCLRSWKGHDGPAIGMA-CHPSGGLLATAGADRKVLVWDVDGGF---CTHYFKGHKG 145
++ + L + H+ + + C+ GL+ T DR + VWD+ GH+
Sbjct: 293 NSGEVLNTLIHHNEAVLHLRFCN---GLMVTCSKDRSIAVWDMASPTDISLRRVLVGHRA 349
Query: 146 VVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLIS 205
V+ + D D + S S D T++VW + V TL+ H + + ++S
Sbjct: 350 AVNVV----DFDDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYRD--RLVVS 403
Query: 206 AGRDKVVNLWDLRDYSCKLTVPTYE 230
D + LWD+ +C + +E
Sbjct: 404 GSSDNTIRLWDIECGACLRVLEGHE 428
Score = 161 (61.7 bits), Expect = 2.8e-08, P = 2.8e-08
Identities = 50/216 (23%), Positives = 97/216 (44%)
Query: 7 KKSYGCEPVLQQFYGGGPLVVSSDGSFIACACGES-INIVDLSNASIKSTIEGGSDTITA 65
K++ C +L + G L + D I +S + + D+++ + +T+ ++ +
Sbjct: 252 KQTLECLKILTG-HTGSVLCLQYDERVIVTGSSDSTVRVWDVNSGEVLNTLIHHNEAVLH 310
Query: 66 LALSPDDKLLFSSGHSREIRVWDLST---LKCLRSWKGHDGPAIGMACHPSGGLLATAGA 122
L + L+ + R I VWD+++ + R GH A+ + +++ +G
Sbjct: 311 LRFC--NGLMVTCSKDRSIAVWDMASPTDISLRRVLVGHRA-AVNVVDFDDKYIVSASG- 366
Query: 123 DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVA 182
DR + VW GHK ++ + + D+ L+ SGS D T+R+WD+ C+
Sbjct: 367 DRTIKVWSTSTCEFVRTLNGHKRGIACLQYR---DR-LVVSGSSDNTIRLWDIECGACLR 422
Query: 183 TLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLR 218
L+ H V I D ++S D + +WDL+
Sbjct: 423 VLEGHEELVR--CIRFDNKRIVSGAYDGKIKVWDLQ 456
Score = 160 (61.4 bits), Expect = 3.6e-08, P = 3.6e-08
Identities = 48/194 (24%), Positives = 90/194 (46%)
Query: 457 LVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDR 516
++SG D++IK+W D + L+ ++ H + L + ++ ++ TGS D
Sbjct: 238 IISGLRDNSIKIW-------DKQ---TLECLKILTGHTGSV--LCLQYDERVIVTGSSDS 285
Query: 517 TACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSIS---DGSCLKT 573
T VW + + T H + + F + +++T S D++I +W ++ D S +
Sbjct: 286 TVRVWDVNSGEVLNTLIHHNEAVLHLRFC--NGLMVTCSKDRSIAVWDMASPTDISLRRV 343
Query: 574 FEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTE 633
GH ++V F + IVS D +K+W+ T E + T + H+ I L +
Sbjct: 344 LVGHRAAVNVVDFDDK--YIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQY--RDR 399
Query: 634 MFATGGSDALVNLW 647
+ +G SD + LW
Sbjct: 400 LVVSGSSDNTIRLW 413
Score = 148 (57.2 bits), Expect = 7.3e-07, P = 7.3e-07
Identities = 39/151 (25%), Positives = 68/151 (45%)
Query: 68 LSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVL 127
L DD+ + S I++WD TL+CL+ GH G + + ++ T +D V
Sbjct: 231 LQYDDEKIISGLRDNSIKIWDKQTLECLKILTGHTGSVLCLQYDER--VIVTGSSDSTVR 288
Query: 128 VWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVA---TL 184
VWDV+ G + H V + F L+ + S D ++ VWD+ + ++ L
Sbjct: 289 VWDVNSGEVLNTLIHHNEAVLHLRFC----NGLMVTCSKDRSIAVWDMASPTDISLRRVL 344
Query: 185 DKHFSRVTSMAITSDGSTLISAGRDKVVNLW 215
H + V + D ++SA D+ + +W
Sbjct: 345 VGHRAAVN--VVDFDDKYIVSASGDRTIKVW 373
Score = 135 (52.6 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 34/150 (22%), Positives = 68/150 (45%)
Query: 505 NDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWS 564
+D + +G +D + +W L + GH + +++ ++V++T S D T+++W
Sbjct: 234 DDEKIISGLRDNSIKIWDKQTLECLKILTGHTGSVLCLQYD--ERVIVTGSSDSTVRVWD 291
Query: 565 ISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIA---TYDKHED 621
++ G L T H +VL F G +V+C D + +W + + I+ H
Sbjct: 292 VNSGEVLNTLIHHNEAVLHLRFCN-GL-MVTCSKDRSIAVWDMASPTDISLRRVLVGHRA 349
Query: 622 KIWALAVGKKTEMFATGGSDALVNLWHDST 651
+ + K + A+G D + +W ST
Sbjct: 350 AVNVVDFDDKYIVSASG--DRTIKVWSTST 377
Score = 49 (22.3 bits), Expect = 2.8e-19, Sum P(2) = 2.8e-19
Identities = 11/38 (28%), Positives = 17/38 (44%)
Query: 199 DGSTLISAGRDKVVNLWDLRDYSCKLTVPTYEMVEAVC 236
D +IS RD + +WD + C L + T +C
Sbjct: 234 DDEKIISGLRDNSIKIWDKQTLEC-LKILTGHTGSVLC 270
>GENEDB_PFALCIPARUM|PF08_0019 [details] [associations]
symbol:PF08_0019 "receptor for activated C
kinase homolog, PfRACK" species:5833 "Plasmodium falciparum"
[GO:0007186 "G-protein coupled receptor signaling pathway"
evidence=ISS] [GO:0005080 "protein kinase C binding" evidence=ISS]
[GO:0005834 "heterotrimeric G-protein complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007186
GO:GO:0016301 HSSP:P16649 HOGENOM:HOG000091643 KO:K14753
OMA:IRVWQVM EMBL:AL844507 GenomeReviews:AL844507_GR
RefSeq:XP_001349258.1 ProteinModelPortal:Q8IBA0 SMR:Q8IBA0
PRIDE:Q8IBA0 EnsemblProtists:PF08_0019:mRNA GeneID:2655468
KEGG:pfa:PF08_0019 EuPathDB:PlasmoDB:PF3D7_0826700
ProtClustDB:CLSZ2430992 Uniprot:Q8IBA0
Length = 323
Score = 240 (89.5 bits), Expect = 3.0e-19, P = 3.0e-19
Identities = 64/215 (29%), Positives = 109/215 (50%)
Query: 439 GHMGAVGAVAF--SKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKD 496
GH V +V+ KL+ +VS S D + VW+ + +DD + AK + H +
Sbjct: 19 GHSDWVTSVSTPTDPKLKT-IVSASRDKKLIVWNIN--TDDDSGEIGT-AKKSLTGHSQA 74
Query: 497 INSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASG 556
IN ++++ + +GS D + +W L ++ +F GH ++SV FSP ++ +++AS
Sbjct: 75 INDVSISSDGLFALSGSWDHSVRLWDLSLGETIRSFIGHTSDVFSVSFSPDNRQIVSASR 134
Query: 557 DKTIKIWSISDGSCLKTF--EGHTSSV--LRASFLTRGAQIVSCGADGLVKLWTVRTGEC 612
DKTIK+W+ C T + HT + +R S A IVSCG D LVK+W ++ +
Sbjct: 135 DKTIKLWNTL-AQCKYTITDQQHTDWITCVRFSPSPNQAIIVSCGWDKLVKVWNLKNCDL 193
Query: 613 IATYDKHEDKIWALAVGKKTEMFATGGSDALVNLW 647
+ H + + + + A+GG D + LW
Sbjct: 194 NKNLEGHTGVLNTVTISPDGSLCASGGKDGVAKLW 228
Score = 220 (82.5 bits), Expect = 1.0e-15, P = 1.0e-15
Identities = 64/261 (24%), Positives = 121/261 (46%)
Query: 41 SINIVDLSN--ASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSW 98
+IN D S + K ++ G S I +++S D S +R+WDLS + +RS+
Sbjct: 51 NINTDDDSGEIGTAKKSLTGHSQAINDVSISSDGLFALSGSWDHSVRLWDLSLGETIRSF 110
Query: 99 KGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYF--KGHKGVVSSILFHPDT 156
GH ++ P + +A D+ + +W+ C + + H ++ + F P
Sbjct: 111 IGHTSDVFSVSFSPDNRQIVSASRDKTIKLWNTLAQ-CKYTITDQQHTDWITCVRFSPSP 169
Query: 157 DKSLLFSGSDDATVRVWDLLAKKCVAT--LDKHFSRVTSMAITSDGSTLISAGRDKVVNL 214
+++++ S D V+VW+L K C L+ H + ++ I+ DGS S G+D V L
Sbjct: 170 NQAIIVSCGWDKLVKVWNL--KNCDLNKNLEGHTGVLNTVTISPDGSLCASGGKDGVAKL 227
Query: 215 WDLRDYSCKLTVPTYEMVEAVCAIPPG----SAFDSFLSSYNQQTIKKKRRSLEIHFITV 270
WD+++ ++ T + ++C P +A D F+ +N ++ K EI+ +
Sbjct: 228 WDVKEGKHLYSLETGSTINSLCFSPCDYWLCAATDRFIRIWN---LESKLIISEIYPVKQ 284
Query: 271 GERGIV----RMWNADSACLY 287
+ G+ W+A+ LY
Sbjct: 285 SKIGVPWCTSLTWSANGQLLY 305
Score = 199 (75.1 bits), Expect = 4.0e-13, P = 4.0e-13
Identities = 61/215 (28%), Positives = 108/215 (50%)
Query: 43 NIVDLSNASIKSTIEGG-SDTITALALSPDDKL--LFSSGHSREIRVWDLSTLK------ 93
NI + + S++ +EGG SD +T+++ D KL + S+ +++ VW+++T
Sbjct: 4 NIKE-AEISLRGVLEGGHSDWVTSVSTPTDPKLKTIVSASRDKKLIVWNINTDDDSGEIG 62
Query: 94 -CLRSWKGHDGPAIGMACHPSGGLLATAGA-DRKVLVWDVDGGFCTHYFKGHKGVVSSIL 151
+S GH AI S GL A +G+ D V +WD+ G F GH V S+
Sbjct: 63 TAKKSLTGHS-QAINDVSISSDGLFALSGSWDHSVRLWDLSLGETIRSFIGHTSDVFSVS 121
Query: 152 FHPDTDKSLLFSGSDDATVRVWDLLAK-KCVATLDKHFSRVTSMAITS--DGSTLISAGR 208
F PD + + S S D T+++W+ LA+ K T +H +T + + + + ++S G
Sbjct: 122 FSPDNRQ--IVSASRDKTIKLWNTLAQCKYTITDQQHTDWITCVRFSPSPNQAIIVSCGW 179
Query: 209 DKVVNLWDLRDYSCKLTVPTYE-MVEAVCAIPPGS 242
DK+V +W+L++ + + ++ V P GS
Sbjct: 180 DKLVKVWNLKNCDLNKNLEGHTGVLNTVTISPDGS 214
Score = 168 (64.2 bits), Expect = 1.5e-09, P = 1.5e-09
Identities = 62/264 (23%), Positives = 114/264 (43%)
Query: 392 LAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSK 451
L GHS+ + + ++SS + ++GS D+SVRLWD + GH V +V+FS
Sbjct: 68 LTGHSQAI---NDVSISSDGLFALSGSWDHSVRLWDLSLGETIRSFIGHTSDVFSVSFSP 124
Query: 452 KLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSL--AVAPNDSLV 509
+ +VS S D TIK+W+ L+ K H I + + +PN +++
Sbjct: 125 DNRQ-IVSASRDKTIKLWNT--LAQ-------CKYTITDQQHTDWITCVRFSPSPNQAII 174
Query: 510 CTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGS 569
+ D+ VW L + GH + +V SP + + D K+W + +G
Sbjct: 175 VSCGWDKLVKVWNLKNCDLNKNLEGHTGVLNTVTISPDGSLCASGGKDGVAKLWDVKEGK 234
Query: 570 CLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIAT-YDKHEDKI---W- 624
L + E T S + + + + D +++W + + I+ Y + KI W
Sbjct: 235 HLYSLE--TGSTINSLCFSPCDYWLCAATDRFIRIWNLESKLIISEIYPVKQSKIGVPWC 292
Query: 625 -ALAVGKKTEMFATGGSDALVNLW 647
+L ++ G +D + ++
Sbjct: 293 TSLTWSANGQLLYCGSTDGNIYVY 316
Score = 123 (48.4 bits), Expect = 0.00017, P = 0.00017
Identities = 30/125 (24%), Positives = 59/125 (47%)
Query: 534 GHKRGIWSVEFSPVD---QVVITASGDKTIKIWSISD-------GSCLKTFEGHTSSVLR 583
GH + SV +P D + +++AS DK + +W+I+ G+ K+ GH+ ++
Sbjct: 19 GHSDWVTSVS-TPTDPKLKTIVSASRDKKLIVWNINTDDDSGEIGTAKKSLTGHSQAIND 77
Query: 584 ASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDAL 643
S + G +S D V+LW + GE I ++ H +++++ + D
Sbjct: 78 VSISSDGLFALSGSWDHSVRLWDLSLGETIRSFIGHTSDVFSVSFSPDNRQIVSASRDKT 137
Query: 644 VNLWH 648
+ LW+
Sbjct: 138 IKLWN 142
Score = 116 (45.9 bits), Expect = 0.00099, P = 0.00099
Identities = 34/146 (23%), Positives = 61/146 (41%)
Query: 34 IACACGESINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLK 93
++C + + + +L N + +EG + + + +SPD L S G ++WD+ K
Sbjct: 175 VSCGWDKLVKVWNLKNCDLNKNLEGHTGVLNTVTISPDGSLCASGGKDGVAKLWDVKEGK 234
Query: 94 CLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTH--Y-FKGHK-GVVSS 149
L S + G I C A DR + +W+++ Y K K GV
Sbjct: 235 HLYSLE--TGSTINSLCFSPCDYWLCAATDRFIRIWNLESKLIISEIYPVKQSKIGVPWC 292
Query: 150 ILFHPDTDKSLLFSGSDDATVRVWDL 175
+ LL+ GS D + V+++
Sbjct: 293 TSLTWSANGQLLYCGSTDGNIYVYEV 318
>UNIPROTKB|Q8IBA0 [details] [associations]
symbol:PfRACK "Receptor for activated C kinase homolog,
PfRACK" species:36329 "Plasmodium falciparum 3D7" [GO:0007186
"G-protein coupled receptor signaling pathway" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007186
GO:GO:0016301 HSSP:P16649 HOGENOM:HOG000091643 KO:K14753
OMA:IRVWQVM EMBL:AL844507 GenomeReviews:AL844507_GR
RefSeq:XP_001349258.1 ProteinModelPortal:Q8IBA0 SMR:Q8IBA0
PRIDE:Q8IBA0 EnsemblProtists:PF08_0019:mRNA GeneID:2655468
KEGG:pfa:PF08_0019 EuPathDB:PlasmoDB:PF3D7_0826700
ProtClustDB:CLSZ2430992 Uniprot:Q8IBA0
Length = 323
Score = 240 (89.5 bits), Expect = 3.0e-19, P = 3.0e-19
Identities = 64/215 (29%), Positives = 109/215 (50%)
Query: 439 GHMGAVGAVAF--SKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKD 496
GH V +V+ KL+ +VS S D + VW+ + +DD + AK + H +
Sbjct: 19 GHSDWVTSVSTPTDPKLKT-IVSASRDKKLIVWNIN--TDDDSGEIGT-AKKSLTGHSQA 74
Query: 497 INSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASG 556
IN ++++ + +GS D + +W L ++ +F GH ++SV FSP ++ +++AS
Sbjct: 75 INDVSISSDGLFALSGSWDHSVRLWDLSLGETIRSFIGHTSDVFSVSFSPDNRQIVSASR 134
Query: 557 DKTIKIWSISDGSCLKTF--EGHTSSV--LRASFLTRGAQIVSCGADGLVKLWTVRTGEC 612
DKTIK+W+ C T + HT + +R S A IVSCG D LVK+W ++ +
Sbjct: 135 DKTIKLWNTL-AQCKYTITDQQHTDWITCVRFSPSPNQAIIVSCGWDKLVKVWNLKNCDL 193
Query: 613 IATYDKHEDKIWALAVGKKTEMFATGGSDALVNLW 647
+ H + + + + A+GG D + LW
Sbjct: 194 NKNLEGHTGVLNTVTISPDGSLCASGGKDGVAKLW 228
Score = 220 (82.5 bits), Expect = 1.0e-15, P = 1.0e-15
Identities = 64/261 (24%), Positives = 121/261 (46%)
Query: 41 SINIVDLSN--ASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSW 98
+IN D S + K ++ G S I +++S D S +R+WDLS + +RS+
Sbjct: 51 NINTDDDSGEIGTAKKSLTGHSQAINDVSISSDGLFALSGSWDHSVRLWDLSLGETIRSF 110
Query: 99 KGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYF--KGHKGVVSSILFHPDT 156
GH ++ P + +A D+ + +W+ C + + H ++ + F P
Sbjct: 111 IGHTSDVFSVSFSPDNRQIVSASRDKTIKLWNTLAQ-CKYTITDQQHTDWITCVRFSPSP 169
Query: 157 DKSLLFSGSDDATVRVWDLLAKKCVAT--LDKHFSRVTSMAITSDGSTLISAGRDKVVNL 214
+++++ S D V+VW+L K C L+ H + ++ I+ DGS S G+D V L
Sbjct: 170 NQAIIVSCGWDKLVKVWNL--KNCDLNKNLEGHTGVLNTVTISPDGSLCASGGKDGVAKL 227
Query: 215 WDLRDYSCKLTVPTYEMVEAVCAIPPG----SAFDSFLSSYNQQTIKKKRRSLEIHFITV 270
WD+++ ++ T + ++C P +A D F+ +N ++ K EI+ +
Sbjct: 228 WDVKEGKHLYSLETGSTINSLCFSPCDYWLCAATDRFIRIWN---LESKLIISEIYPVKQ 284
Query: 271 GERGIV----RMWNADSACLY 287
+ G+ W+A+ LY
Sbjct: 285 SKIGVPWCTSLTWSANGQLLY 305
Score = 199 (75.1 bits), Expect = 4.0e-13, P = 4.0e-13
Identities = 61/215 (28%), Positives = 108/215 (50%)
Query: 43 NIVDLSNASIKSTIEGG-SDTITALALSPDDKL--LFSSGHSREIRVWDLSTLK------ 93
NI + + S++ +EGG SD +T+++ D KL + S+ +++ VW+++T
Sbjct: 4 NIKE-AEISLRGVLEGGHSDWVTSVSTPTDPKLKTIVSASRDKKLIVWNINTDDDSGEIG 62
Query: 94 -CLRSWKGHDGPAIGMACHPSGGLLATAGA-DRKVLVWDVDGGFCTHYFKGHKGVVSSIL 151
+S GH AI S GL A +G+ D V +WD+ G F GH V S+
Sbjct: 63 TAKKSLTGHS-QAINDVSISSDGLFALSGSWDHSVRLWDLSLGETIRSFIGHTSDVFSVS 121
Query: 152 FHPDTDKSLLFSGSDDATVRVWDLLAK-KCVATLDKHFSRVTSMAITS--DGSTLISAGR 208
F PD + + S S D T+++W+ LA+ K T +H +T + + + + ++S G
Sbjct: 122 FSPDNRQ--IVSASRDKTIKLWNTLAQCKYTITDQQHTDWITCVRFSPSPNQAIIVSCGW 179
Query: 209 DKVVNLWDLRDYSCKLTVPTYE-MVEAVCAIPPGS 242
DK+V +W+L++ + + ++ V P GS
Sbjct: 180 DKLVKVWNLKNCDLNKNLEGHTGVLNTVTISPDGS 214
Score = 168 (64.2 bits), Expect = 1.5e-09, P = 1.5e-09
Identities = 62/264 (23%), Positives = 114/264 (43%)
Query: 392 LAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSK 451
L GHS+ + + ++SS + ++GS D+SVRLWD + GH V +V+FS
Sbjct: 68 LTGHSQAI---NDVSISSDGLFALSGSWDHSVRLWDLSLGETIRSFIGHTSDVFSVSFSP 124
Query: 452 KLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSL--AVAPNDSLV 509
+ +VS S D TIK+W+ L+ K H I + + +PN +++
Sbjct: 125 DNRQ-IVSASRDKTIKLWNT--LAQ-------CKYTITDQQHTDWITCVRFSPSPNQAII 174
Query: 510 CTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGS 569
+ D+ VW L + GH + +V SP + + D K+W + +G
Sbjct: 175 VSCGWDKLVKVWNLKNCDLNKNLEGHTGVLNTVTISPDGSLCASGGKDGVAKLWDVKEGK 234
Query: 570 CLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIAT-YDKHEDKI---W- 624
L + E T S + + + + D +++W + + I+ Y + KI W
Sbjct: 235 HLYSLE--TGSTINSLCFSPCDYWLCAATDRFIRIWNLESKLIISEIYPVKQSKIGVPWC 292
Query: 625 -ALAVGKKTEMFATGGSDALVNLW 647
+L ++ G +D + ++
Sbjct: 293 TSLTWSANGQLLYCGSTDGNIYVY 316
Score = 123 (48.4 bits), Expect = 0.00017, P = 0.00017
Identities = 30/125 (24%), Positives = 59/125 (47%)
Query: 534 GHKRGIWSVEFSPVD---QVVITASGDKTIKIWSISD-------GSCLKTFEGHTSSVLR 583
GH + SV +P D + +++AS DK + +W+I+ G+ K+ GH+ ++
Sbjct: 19 GHSDWVTSVS-TPTDPKLKTIVSASRDKKLIVWNINTDDDSGEIGTAKKSLTGHSQAIND 77
Query: 584 ASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDAL 643
S + G +S D V+LW + GE I ++ H +++++ + D
Sbjct: 78 VSISSDGLFALSGSWDHSVRLWDLSLGETIRSFIGHTSDVFSVSFSPDNRQIVSASRDKT 137
Query: 644 VNLWH 648
+ LW+
Sbjct: 138 IKLWN 142
Score = 116 (45.9 bits), Expect = 0.00099, P = 0.00099
Identities = 34/146 (23%), Positives = 61/146 (41%)
Query: 34 IACACGESINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLK 93
++C + + + +L N + +EG + + + +SPD L S G ++WD+ K
Sbjct: 175 VSCGWDKLVKVWNLKNCDLNKNLEGHTGVLNTVTISPDGSLCASGGKDGVAKLWDVKEGK 234
Query: 94 CLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTH--Y-FKGHK-GVVSS 149
L S + G I C A DR + +W+++ Y K K GV
Sbjct: 235 HLYSLE--TGSTINSLCFSPCDYWLCAATDRFIRIWNLESKLIISEIYPVKQSKIGVPWC 292
Query: 150 ILFHPDTDKSLLFSGSDDATVRVWDL 175
+ LL+ GS D + V+++
Sbjct: 293 TSLTWSANGQLLYCGSTDGNIYVYEV 318
>DICTYBASE|DDB_G0289115 [details] [associations]
symbol:mhkB "myosin heavy chain kinase B"
species:44689 "Dictyostelium discoideum" [GO:0018107
"peptidyl-threonine phosphorylation" evidence=IDA] [GO:0031037
"myosin II filament disassembly" evidence=IMP] [GO:0005826
"actomyosin contractile ring" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0000910 "cytokinesis" evidence=IMP] [GO:0046777
"protein autophosphorylation" evidence=IDA] [GO:0045159 "myosin II
binding" evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA;IC]
[GO:0004674 "protein serine/threonine kinase activity"
evidence=IEA;IDA] [GO:0016905 "myosin heavy chain kinase activity"
evidence=IEA;IDA] [GO:0016772 "transferase activity, transferring
phosphorus-containing groups" evidence=IEA] [GO:0006468 "protein
phosphorylation" evidence=IEA] [GO:0016740 "transferase activity"
evidence=IEA] [GO:0016310 "phosphorylation" evidence=IEA]
[GO:0016301 "kinase activity" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR004166 InterPro:IPR011009 InterPro:IPR015943
Pfam:PF00400 Pfam:PF02816 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS51158 SMART:SM00320 SMART:SM00811 dictyBase:DDB_G0289115
GO:GO:0005524 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 SUPFAM:SSF56112 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0046777
GenomeReviews:CM000154_GR GO:GO:0000910 KO:K00924 GO:GO:0005826
GO:GO:0018107 EMBL:AAFI02000130 BRENDA:2.7.11.7 GO:GO:0031037
GO:GO:0016905 EMBL:U90946 RefSeq:XP_636368.1
ProteinModelPortal:P90648 EnsemblProtists:DDB0191333 GeneID:8626969
KEGG:ddi:DDB_G0289115 OMA:NDERNTP ProtClustDB:CLSZ2846619
Uniprot:P90648
Length = 732
Score = 263 (97.6 bits), Expect = 3.8e-19, P = 3.8e-19
Identities = 83/262 (31%), Positives = 132/262 (50%)
Query: 40 ESINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLST--LKCLRS 97
ESIN L + TI+G T + L + D LLF+ IRV+D + ++C+++
Sbjct: 444 ESIN---LETIKLIETIKGYHVT-SHLCIC--DNLLFTGCSDNSIRVYDYKSQNMECVQT 497
Query: 98 WKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTD 157
KGH+GP + C+ + L + +D + VWD+ C +GH V ++L + D
Sbjct: 498 LKGHEGP-VESICY-NDQYLFSGSSDHSIKVWDLKKLRCIFTLEGHDKPVHTVLLN---D 552
Query: 158 KSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDL 217
K LFSGS D T++VWDL +C TL+ H V ++ I+ G L S DK + +WDL
Sbjct: 553 K-YLFSGSSDKTIKVWDLKTLECKYTLESHARAVKTLCIS--GQYLFSGSNDKTIKVWDL 609
Query: 218 RDYSCKLTVPTY-EMVEAVCAIPPGSAFDSFLSSYNQQTIKK-KRRSLEIHFITVG-ERG 274
+ + C T+ + + V +C + G+ + + SY++ TI+ +SLE G +R
Sbjct: 610 KTFRCNYTLKGHTKWVTTICIL--GT--NLYSGSYDK-TIRVWNLKSLECSATLRGHDRW 664
Query: 275 IVRMWNADSACLYEQKSSDVTI 296
+ M D L S D TI
Sbjct: 665 VEHMVICDK--LLFTASDDNTI 684
Score = 257 (95.5 bits), Expect = 1.7e-18, P = 1.7e-18
Identities = 72/235 (30%), Positives = 114/235 (48%)
Query: 413 LIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFD 472
L+ TG DNS+R++D +S+ V T G G V +L SGSSDH+IKVW
Sbjct: 472 LLFTGCSDNSIRVYDYKSQNMECVQT-LKGHEGPVESICYNDQYLFSGSSDHSIKVW--- 527
Query: 473 GLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTF 532
D ++ L+ + H K ++++ + ND + +GS D+T VW L L T
Sbjct: 528 ----DLKK---LRCIFTLEGHDKPVHTVLL--NDKYLFSGSSDKTIKVWDLKTLECKYTL 578
Query: 533 RGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQ 592
H R + ++ S Q + + S DKTIK+W + C T +GHT V L G
Sbjct: 579 ESHARAVKTLCIS--GQYLFSGSNDKTIKVWDLKTFRCNYTLKGHTKWVTTICIL--GTN 634
Query: 593 IVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLW 647
+ S D +++W +++ EC AT H+ + + + K +F T D + +W
Sbjct: 635 LYSGSYDKTIRVWNLKSLECSATLRGHDRWVEHMVICDKL-LF-TASDDNTIKIW 687
Score = 255 (94.8 bits), Expect = 2.8e-18, P = 2.8e-18
Identities = 70/260 (26%), Positives = 128/260 (49%)
Query: 33 FIACACGESINIVDLSNASIK--STIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLS 90
F C+ SI + D + +++ T++G + ++ + D+ LFS I+VWDL
Sbjct: 474 FTGCS-DNSIRVYDYKSQNMECVQTLKGHEGPVESICYN--DQYLFSGSSDHSIKVWDLK 530
Query: 91 TLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSI 150
L+C+ + +GHD P + + L + +D+ + VWD+ C + + H V ++
Sbjct: 531 KLRCIFTLEGHDKPVHTVLLNDK--YLFSGSSDKTIKVWDLKTLECKYTLESHARAVKTL 588
Query: 151 LFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDK 210
LFSGS+D T++VWDL +C TL H VT++ I G+ L S DK
Sbjct: 589 CI----SGQYLFSGSNDKTIKVWDLKTFRCNYTLKGHTKWVTTICIL--GTNLYSGSYDK 642
Query: 211 VVNLWDLRDYSCKLTVPTYEM-VE--AVC-AIPPGSAFDSFLSSYNQQTIKKKRRSLEIH 266
+ +W+L+ C T+ ++ VE +C + ++ D+ + ++ +T++ +LE H
Sbjct: 643 TIRVWNLKSLECSATLRGHDRWVEHMVICDKLLFTASDDNTIKIWDLETLRCNT-TLEGH 701
Query: 267 FITVGERGIVRMWNADSACL 286
TV + +W D C+
Sbjct: 702 NATVQ---CLAVWE-DKKCV 717
Score = 249 (92.7 bits), Expect = 1.3e-17, P = 1.3e-17
Identities = 68/215 (31%), Positives = 101/215 (46%)
Query: 12 CEPVLQQFYGGGPLVVSSDGSFIACACGESINIVDLSNASIKSTIEGGSDTITALALSPD 71
C L+ G + +D + + SI + DL T+EG + + L+
Sbjct: 494 CVQTLKGHEGPVESICYNDQYLFSGSSDHSIKVWDLKKLRCIFTLEGHDKPVHTVLLN-- 551
Query: 72 DKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDV 131
DK LFS + I+VWDL TL+C + + H A+ C SG L + D+ + VWD+
Sbjct: 552 DKYLFSGSSDKTIKVWDLKTLECKYTLESH-ARAVKTLCI-SGQYLFSGSNDKTIKVWDL 609
Query: 132 DGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRV 191
C + KGH V++I T+ L+SGS D T+RVW+L + +C ATL H V
Sbjct: 610 KTFRCNYTLKGHTKWVTTICIL-GTN---LYSGSYDKTIRVWNLKSLECSATLRGHDRWV 665
Query: 192 TSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTV 226
M I L +A D + +WDL C T+
Sbjct: 666 EHMVICD--KLLFTASDDNTIKIWDLETLRCNTTL 698
Score = 234 (87.4 bits), Expect = 5.5e-16, P = 5.5e-16
Identities = 56/190 (29%), Positives = 96/190 (50%)
Query: 26 VVSSDGSFIACACGESINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIR 85
V+ +D + + ++I + DL K T+E + + L +S + LFS + + I+
Sbjct: 548 VLLNDKYLFSGSSDKTIKVWDLKTLECKYTLESHARAVKTLCIS--GQYLFSGSNDKTIK 605
Query: 86 VWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKG 145
VWDL T +C + KGH + C G L + D+ + VW++ C+ +GH
Sbjct: 606 VWDLKTFRCNYTLKGHT-KWVTTICI-LGTNLYSGSYDKTIRVWNLKSLECSATLRGHDR 663
Query: 146 VVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLIS 205
V ++ DK LLF+ SDD T+++WDL +C TL+ H + V +A+ D +IS
Sbjct: 664 WVEHMVI---CDK-LLFTASDDNTIKIWDLETLRCNTTLEGHNATVQCLAVWEDKKCVIS 719
Query: 206 AGRDKVVNLW 215
D+ + +W
Sbjct: 720 CSHDQSIRVW 729
Score = 196 (74.1 bits), Expect = 7.5e-12, P = 7.5e-12
Identities = 49/194 (25%), Positives = 90/194 (46%)
Query: 455 NFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQ 514
N L +G SD++I+V+ + + N++ + H + S+ ND + +GS
Sbjct: 471 NLLFTGCSDNSIRVYDY--------KSQNMECVQTLKGHEGPVESICY--NDQYLFSGSS 520
Query: 515 DRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTF 574
D + VW L L + T GH + + +V + D+ + + S DKTIK+W + C T
Sbjct: 521 DHSIKVWDLKKLRCIFTLEGHDKPVHTVLLN--DKYLFSGSSDKTIKVWDLKTLECKYTL 578
Query: 575 EGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEM 634
E H +V + G + S D +K+W ++T C T H + + + T +
Sbjct: 579 ESHARAV--KTLCISGQYLFSGSNDKTIKVWDLKTFRCNYTLKGHTKWVTTICI-LGTNL 635
Query: 635 FATGGSDALVNLWH 648
++ G D + +W+
Sbjct: 636 YS-GSYDKTIRVWN 648
Score = 190 (71.9 bits), Expect = 3.3e-11, P = 3.3e-11
Identities = 49/192 (25%), Positives = 83/192 (43%)
Query: 456 FLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQD 515
+L SGSSD TIKVW L+ K + +H + + +L ++ + +GS D
Sbjct: 554 YLFSGSSDKTIKVWDLK----------TLECKYTLESHARAVKTLCIS--GQYLFSGSND 601
Query: 516 RTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFE 575
+T VW L T +GH + W + + + S DKTI++W++ C T
Sbjct: 602 KTIKVWDLKTFRCNYTLKGHTK--WVTTICILGTNLYSGSYDKTIRVWNLKSLECSATLR 659
Query: 576 GHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMF 635
GH V + + + D +K+W + T C T + H + LAV + +
Sbjct: 660 GHDRWVEHMVICDK--LLFTASDDNTIKIWDLETLRCNTTLEGHNATVQCLAVWEDKKCV 717
Query: 636 ATGGSDALVNLW 647
+ D + +W
Sbjct: 718 ISCSHDQSIRVW 729
Score = 156 (60.0 bits), Expect = 1.6e-07, P = 1.6e-07
Identities = 67/280 (23%), Positives = 125/280 (44%)
Query: 159 SLLFSGSDDATVRVWDLLAK--KCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWD 216
+LLF+G D ++RV+D ++ +CV TL H V S I + L S D + +WD
Sbjct: 471 NLLFTGCSDNSIRVYDYKSQNMECVQTLKGHEGPVES--ICYNDQYLFSGSSDHSIKVWD 528
Query: 217 LRDYSCKLTVPTYEMVEAVCAIPPGSAFDSFL-SSYNQQTIKK-KRRSLEIHFITVGERG 274
L+ C T+ ++ + D +L S + +TIK ++LE +
Sbjct: 529 LKKLRCIFTLEGHDKPVHTVLLN-----DKYLFSGSSDKTIKVWDLKTLECKYTLESHAR 583
Query: 275 IVRMWNADSACLYEQKSSDVTI------SFEMDDSKRGFT--AATVLPSNQGLLCVTADQ 326
V+ L+ S+D TI +F + + +G T T+ L + D+
Sbjct: 584 AVKTLCISGQYLFSG-SNDKTIKVWDLKTFRCNYTLKGHTKWVTTICILGTNLYSGSYDK 642
Query: 327 QLLLYTTVEVPEKKMELILSKRLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSM 386
+ ++ K +E S L G++ + + ++ L A++ ++++DL ++
Sbjct: 643 TIRVWNL-----KSLEC--SATLRGHDRWVEHMVIC---DKLLFTASDDNTIKIWDLETL 692
Query: 387 SCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLW 426
C+ L GH+ V CL A+ K +++ S D S+R+W
Sbjct: 693 RCNTTLEGHNATVQCL---AVWEDKKCVISCSHDQSIRVW 729
Score = 147 (56.8 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 35/108 (32%), Positives = 58/108 (53%)
Query: 367 QYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLW 426
QYL +N + ++V+DL + C+Y L GH++ V + C L + + +GS D ++R+W
Sbjct: 593 QYLFSGSNDKTIKVWDLKTFRCNYTLKGHTKWVTTI--CILGTN---LYSGSYDKTIRVW 647
Query: 427 DSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGL 474
+ +S C GH V + KL L + S D+TIK+W + L
Sbjct: 648 NLKSLECSATLRGHDRWVEHMVICDKL---LFTASDDNTIKIWDLETL 692
Score = 129 (50.5 bits), Expect = 0.00014, P = 0.00014
Identities = 73/303 (24%), Positives = 135/303 (44%)
Query: 179 KCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYS--CKLTVPTYE-MVEAV 235
K + T+ + VTS D + L + D + ++D + + C T+ +E VE++
Sbjct: 452 KLIETIKGY--HVTSHLCICD-NLLFTGCSDNSIRVYDYKSQNMECVQTLKGHEGPVESI 508
Query: 236 CAIPPGSAFDSFL-SSYNQQTIKK-KRRSLEIHFITVGERGIVRMWNADSACLYEQKSSD 293
C D +L S + +IK + L F G V + L+ SSD
Sbjct: 509 CYN------DQYLFSGSSDHSIKVWDLKKLRCIFTLEGHDKPVHTVLLNDKYLFSG-SSD 561
Query: 294 VTIS-FEMDDSKRGFTAATVLPSNQGLLCVTADQQLLLYT---TVEVPEKKMELILSKRL 349
TI +++ + +T + + + LC++ Q L + T++V + K + L
Sbjct: 562 KTIKVWDLKTLECKYTLESHARAVK-TLCISG-QYLFSGSNDKTIKVWDLKT-FRCNYTL 618
Query: 350 VGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSS 409
G+ + + + LG L + + ++V++L S+ CS L GH V + C
Sbjct: 619 KGHTKWVTTICILGTN---LYSGSYDKTIRVWNLKSLECSATLRGHDRWVEHMVIC---- 671
Query: 410 GKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVW 469
K+L T S DN++++WD E+ C GH V +A + + ++S S D +I+VW
Sbjct: 672 DKLLF-TASDDNTIKIWDLETLRCNTTLEGHNATVQCLAVWED-KKCVISCSHDQSIRVW 729
Query: 470 SFD 472
++
Sbjct: 730 GWN 732
>UNIPROTKB|E1C4U3 [details] [associations]
symbol:E1C4U3 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0004402 "histone
acetyltransferase activity" evidence=IEA] [GO:0005669
"transcription factor TFIID complex" evidence=IEA] [GO:0006367
"transcription initiation from RNA polymerase II promoter"
evidence=IEA] [GO:0015629 "actin cytoskeleton" evidence=IEA]
[GO:0033276 "transcription factor TFTC complex" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0015629
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003700 GO:GO:0044212
GO:GO:0006367 GO:GO:0004402 GO:GO:0005669 GO:GO:0033276
GeneTree:ENSGT00700000104377 OMA:ERQNNQI EMBL:AADN02030830
EMBL:AADN02030831 IPI:IPI00579493 ProteinModelPortal:E1C4U3
Ensembl:ENSGALT00000013413 Uniprot:E1C4U3
Length = 780
Score = 255 (94.8 bits), Expect = 3.9e-19, Sum P(2) = 3.9e-19
Identities = 62/235 (26%), Positives = 101/235 (42%)
Query: 413 LIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFD 472
LI S D R+ D ++ + + GH G V +FS +N+L+S S D T+++WS
Sbjct: 495 LIDKESDDVLERIMDEKTASELKILYGHSGPVYGTSFSPD-RNYLLSCSEDGTVRLWSLQ 553
Query: 473 GLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTF 532
+ H + +P +G DR A +W + F
Sbjct: 554 TFT----------CLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIF 603
Query: 533 RGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQ 592
GH + F P + T S D+T+++W + +G+C++ F GH + +F G
Sbjct: 604 AGHLADVTCTRFHPNSNYIATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLAFSPNGRF 663
Query: 593 IVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLW 647
+ + DG V LW + G + H D I+AL + E+ A+G D V LW
Sbjct: 664 LATGATDGRVLLWDIGHGLMVGELKGHTDTIYALRFSRDGEILASGSMDNTVRLW 718
Score = 241 (89.9 bits), Expect = 1.1e-16, P = 1.1e-16
Identities = 70/257 (27%), Positives = 108/257 (42%)
Query: 16 LQQFYG-GGPLVVSS---DGSFI-ACACGESINIVDLSNASIKSTIEGGSDTITALALSP 70
L+ YG GP+ +S D +++ +C+ ++ + L + +G + + SP
Sbjct: 516 LKILYGHSGPVYGTSFSPDRNYLLSCSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSP 575
Query: 71 DDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWD 130
S GH R R+W + LR + GH HP+ +AT ADR V +WD
Sbjct: 576 YGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVTCTRFHPNSNYIATGSADRTVRLWD 635
Query: 131 VDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSR 190
V G C F GHKG + S+ F P+ L +G+ D V +WD+ V L H
Sbjct: 636 VLNGNCVRIFTGHKGPIHSLAFSPNG--RFLATGATDGRVLLWDIGHGLMVGELKGHTDT 693
Query: 191 VTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYEMVEAVCAIPPGSAFDSFLSS 250
+ ++ + DG L S D V LWD L + +P S D L +
Sbjct: 694 IYALRFSRDGEILASGSMDNTVRLWDAVKAFEDLETDDFTTATGHINLPENSQ-DLLLGT 752
Query: 251 YNQQTIKKKRRSLEIHF 267
Y + K + +HF
Sbjct: 753 Y----MTKSTPVVHLHF 765
Score = 240 (89.5 bits), Expect = 1.7e-17, Sum P(2) = 1.7e-17
Identities = 72/242 (29%), Positives = 116/242 (47%)
Query: 379 QVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVG- 437
++ D + S +L GHS V + S + +++ S+D +VRLW ++ C+ VG
Sbjct: 506 RIMDEKTASELKILYGHSGPVY---GTSFSPDRNYLLSCSEDGTVRLWSLQTFTCL-VGY 561
Query: 438 TGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDI 497
GH V FS + VSG D ++W+ D QP+ + A H D+
Sbjct: 562 KGHNYPVWDTQFSP-YGYYFVSGGHDRVARLWATDHY-----QPLR-----IFAGHLADV 610
Query: 498 NSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGD 557
PN + + TGS DRT +W + + V F GHK I S+ FSP + + T + D
Sbjct: 611 TCTRFHPNSNYIATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLAFSPNGRFLATGATD 670
Query: 558 KTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGA-DGLVKLW-TVRTGECIAT 615
+ +W I G + +GHT ++ F +R +I++ G+ D V+LW V+ E + T
Sbjct: 671 GRVLLWDIGHGLMVGELKGHTDTIYALRF-SRDGEILASGSMDNTVRLWDAVKAFEDLET 729
Query: 616 YD 617
D
Sbjct: 730 DD 731
Score = 240 (89.5 bits), Expect = 1.4e-16, P = 1.4e-16
Identities = 56/174 (32%), Positives = 80/174 (45%)
Query: 44 IVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDG 103
I+D AS + G S + + SPD L S +R+W L T CL +KGH+
Sbjct: 507 IMDEKTASELKILYGHSGPVYGTSFSPDRNYLLSCSEDGTVRLWSLQTFTCLVGYKGHNY 566
Query: 104 PAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFS 163
P P G + G DR +W D F GH V+ FHP+++ + +
Sbjct: 567 PVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVTCTRFHPNSN--YIAT 624
Query: 164 GSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDL 217
GS D TVR+WD+L CV H + S+A + +G L + D V LWD+
Sbjct: 625 GSADRTVRLWDVLNGNCVRIFTGHKGPIHSLAFSPNGRFLATGATDGRVLLWDI 678
Score = 226 (84.6 bits), Expect = 5.9e-16, Sum P(2) = 5.9e-16
Identities = 54/201 (26%), Positives = 94/201 (46%)
Query: 451 KKLQNFLVSGSSDHTIKVWSFDGLSDDA-EQPMNLKAKA---VVAAHGKDINSLAVAPND 506
KKL++ V ++D ++ D SDD E+ M+ K + ++ H + + +P+
Sbjct: 482 KKLRS--VKAAADLSL----IDKESDDVLERIMDEKTASELKILYGHSGPVYGTSFSPDR 535
Query: 507 SLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSIS 566
+ + + S+D T +W L +V ++GH +W +FSP ++ D+ ++W+
Sbjct: 536 NYLLSCSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATD 595
Query: 567 DGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWAL 626
L+ F GH + V F I + AD V+LW V G C+ + H+ I +L
Sbjct: 596 HYQPLRIFAGHLADVTCTRFHPNSNYIATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSL 655
Query: 627 AVGKKTEMFATGGSDALVNLW 647
A ATG +D V LW
Sbjct: 656 AFSPNGRFLATGATDGRVLLW 676
Score = 200 (75.5 bits), Expect = 4.0e-13, Sum P(2) = 4.0e-13
Identities = 63/256 (24%), Positives = 113/256 (44%)
Query: 311 TVLPSNQGLLCVTADQQLLLYTTVEVPEKKM-ELILS--KRLVGYNEEILDLKFLGEEEQ 367
+V P + AD L+ + +V E+ M E S K L G++ + F +
Sbjct: 478 SVTPKKLRSVKAAADLSLIDKESDDVLERIMDEKTASELKILYGHSGPVYGTSF-SPDRN 536
Query: 368 YLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWD 427
YL + V+++ L + +C GH+ V DT S V+G D RLW
Sbjct: 537 YLLSCSEDGTVRLWSLQTFTCLVGYKGHNYPVW--DT-QFSPYGYYFVSGGHDRVARLWA 593
Query: 428 SESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAK 487
++ + + GH+ V F N++ +GS+D T+++W +N
Sbjct: 594 TDHYQPLRIFAGHLADVTCTRFHPN-SNYIATGSADRTVRLWDV----------LNGNCV 642
Query: 488 AVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPV 547
+ H I+SLA +PN + TG+ D +W + + V +GH I+++ FS
Sbjct: 643 RIFTGHKGPIHSLAFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTIYALRFSRD 702
Query: 548 DQVVITASGDKTIKIW 563
+++ + S D T+++W
Sbjct: 703 GEILASGSMDNTVRLW 718
Score = 144 (55.7 bits), Expect = 3.5e-06, P = 3.5e-06
Identities = 40/151 (26%), Positives = 64/151 (42%)
Query: 497 INSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASG 556
+ ++ + + S++ G D T VW V+ R K + + S +D+ S
Sbjct: 453 LTAVDITDDSSMIVGGFADSTVRVWS----VTPKKLRSVKA---AADLSLIDK----ESD 501
Query: 557 DKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATY 616
D +I S LK GH+ V SF ++SC DG V+LW+++T C+ Y
Sbjct: 502 DVLERIMDEKTASELKILYGHSGPVYGTSFSPDRNYLLSCSEDGTVRLWSLQTFTCLVGY 561
Query: 617 DKHEDKIWALAVGKKTEMFATGGSDALVNLW 647
H +W F +GG D + LW
Sbjct: 562 KGHNYPVWDTQFSPYGYYFVSGGHDRVARLW 592
Score = 131 (51.2 bits), Expect = 5.2e-13, Sum P(2) = 5.2e-13
Identities = 47/208 (22%), Positives = 83/208 (39%)
Query: 16 LQQFYGGGPLVVSSDGSFIACACGES-INIVDLSNASIKSTIEGGSDTITALALSPDDKL 74
L + G + ++ D S I +S + + ++ ++S ++ +D ++ + DD L
Sbjct: 447 LNAYQGLTAVDITDDSSMIVGGFADSTVRVWSVTPKKLRS-VKAAAD-LSLIDKESDDVL 504
Query: 75 LFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGG 134
E R+ D T L+ GH GP G + P L + D V +W +
Sbjct: 505 --------E-RIMDEKTASELKILYGHSGPVYGTSFSPDRNYLLSCSEDGTVRLWSLQTF 555
Query: 135 FCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSM 194
C +KGH V F P SG D R+W + + H + VT
Sbjct: 556 TCLVGYKGHNYPVWDTQFSPYG--YYFVSGGHDRVARLWATDHYQPLRIFAGHLADVTCT 613
Query: 195 AITSDGSTLISAGRDKVVNLWDLRDYSC 222
+ + + + D+ V LWD+ + +C
Sbjct: 614 RFHPNSNYIATGSADRTVRLWDVLNGNC 641
Score = 128 (50.1 bits), Expect = 5.2e-13, Sum P(2) = 5.2e-13
Identities = 34/114 (29%), Positives = 56/114 (49%)
Query: 368 YLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWD 427
Y+A + V+++D+ + +C + GH + L A S + TG+ D V LWD
Sbjct: 621 YIATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSL---AFSPNGRFLATGATDGRVLLWD 677
Query: 428 SESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVW----SFDGLSDD 477
VG GH + A+ FS+ + L SGS D+T+++W +F+ L D
Sbjct: 678 IGHGLMVGELKGHTDTIYALRFSRDGE-ILASGSMDNTVRLWDAVKAFEDLETD 730
Score = 57 (25.1 bits), Expect = 3.9e-19, Sum P(2) = 3.9e-19
Identities = 17/66 (25%), Positives = 28/66 (42%)
Query: 155 DTDKSLLFSGSDDATVRVW---DLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKV 211
D+DK +A RV + L C T + +T++ IT D S ++ D
Sbjct: 414 DSDKLDKVMNMKEAARRVRLGPECLPSICFYTFLNAYQGLTAVDITDDSSMIVGGFADST 473
Query: 212 VNLWDL 217
V +W +
Sbjct: 474 VRVWSV 479
Score = 44 (20.5 bits), Expect = 0.00047, Sum P(2) = 0.00047
Identities = 31/143 (21%), Positives = 53/143 (37%)
Query: 157 DKSLLFSGSDDATVRVWDLLAKKC--------VATLDKH----FSRVTSMAITSDGSTLI 204
D S++ G D+TVRVW + KK ++ +DK R+ S+ L
Sbjct: 461 DSSMIVGGFADSTVRVWSVTPKKLRSVKAAADLSLIDKESDDVLERIMDEKTASELKILY 520
Query: 205 S-AGRDKVVNLWDLRDY--SCKL--TVPTYEMVEAVCAIPPGSAFDSFLSSYNQQTIKKK 259
+G + R+Y SC TV + + C + G +N +
Sbjct: 521 GHSGPVYGTSFSPDRNYLLSCSEDGTVRLWSLQTFTCLV--G------YKGHNYPVWDTQ 572
Query: 260 RRSLEIHFITVGERGIVRMWNAD 282
+F++ G + R+W D
Sbjct: 573 FSPYGYYFVSGGHDRVARLWATD 595
Score = 41 (19.5 bits), Expect = 1.8e-17, Sum P(2) = 1.8e-17
Identities = 12/39 (30%), Positives = 19/39 (48%)
Query: 388 CSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLW 426
C Y + + +D SS +IV G D++VR+W
Sbjct: 442 CFYTFLNAYQGLTAVDITDDSS---MIVGGFADSTVRVW 477
>POMBASE|SPAC630.14c [details] [associations]
symbol:tup12 "transcriptional corepressor Tup12"
species:4896 "Schizosaccharomyces pombe" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:0000790 "nuclear chromatin" evidence=IC]
[GO:0003714 "transcription corepressor activity" evidence=IGI;IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006342 "chromatin silencing"
evidence=IMP] [GO:0042393 "histone binding" evidence=IDA]
[GO:0043156 "chromatin remodeling in response to cation stress"
evidence=IMP] [GO:0043234 "protein complex" evidence=NAS]
[GO:0045014 "negative regulation of transcription by glucose"
evidence=IMP] [GO:0071473 "cellular response to cation stress"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPAC630.14c InterPro:IPR001632 GO:GO:0005829
GO:GO:0003714 GO:GO:0043234 EMBL:CU329670 GenomeReviews:CU329670_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0000122 GO:GO:0000790 GO:GO:0006342
GO:GO:0042393 GO:GO:0045014 PRINTS:PR00319 HOGENOM:HOG000200558
OrthoDB:EOG4KM2C2 InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558
EMBL:U92792 PIR:T38992 RefSeq:NP_592910.2 ProteinModelPortal:Q9UUG8
STRING:Q9UUG8 EnsemblFungi:SPAC630.14c.1 GeneID:2543402
NextBio:20804417 GO:GO:0043156 Uniprot:Q9UUG8
Length = 598
Score = 261 (96.9 bits), Expect = 4.0e-19, P = 4.0e-19
Identities = 85/333 (25%), Positives = 146/333 (43%)
Query: 333 TVEVPEKKMELILSK-RLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYV 391
T VP K+ + + + + I ++F + ++LA N V+++ + +
Sbjct: 278 TSNVPNKEPPISVQLLHTLEHTSVICYVRF-SADGKFLATGCN-RAAMVFNVETGKLITL 335
Query: 392 LAGHS---EIVLCLDTCALS-SGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAV 447
L S E L + + A S GK L TG +D +R+WD + + TGH + ++
Sbjct: 336 LQEESSKREGDLYVRSVAFSPDGKYL-ATGVEDQQIRIWDIAQKRVYRLLTGHEQEIYSL 394
Query: 448 AFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKD-INSLAVAPND 506
FSK + LVSGS D T+ +W + EQ + L H D + ++ +P+
Sbjct: 395 DFSKDGKT-LVSGSGDRTVCLWDVEA----GEQKLIL--------HTDDGVTTVMFSPDG 441
Query: 507 SLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSIS 566
+ GS D+ +W + V GH+ ++SV FSP + +++ S D TIK+W +
Sbjct: 442 QFIAAGSLDKVIRIWTSSGTL-VEQLHGHEESVYSVAFSPDGKYLVSGSLDNTIKLWELQ 500
Query: 567 ------------DGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIA 614
G C +TF GH +L + G I+S D ++ W+ +
Sbjct: 501 CVSNVAPSMYKEGGICKQTFTGHKDFILSVTVSPDGKWIISGSKDRTIQFWSPDSPHSQL 560
Query: 615 TYDKHEDKIWALAVGKKTEMFATGGSDALVNLW 647
T H + + ++AV FATG D +W
Sbjct: 561 TLQGHNNSVISVAVSPNGHCFATGSGDLRARIW 593
Score = 232 (86.7 bits), Expect = 6.1e-16, P = 6.1e-16
Identities = 79/259 (30%), Positives = 123/259 (47%)
Query: 314 PSNQGLLCVTADQQLLLYTTVEVPEKKMELILSKRLVGYNEEILDLKFLGEEEQYLAVAT 373
P + L DQQ+ ++ ++ +K++ +L+ G+ +EI L F ++ + L +
Sbjct: 356 PDGKYLATGVEDQQIRIW---DIAQKRVYRLLT----GHEQEIYSLDF-SKDGKTLVSGS 407
Query: 374 NIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCC 433
V ++D+ + +L H++ + T S I GS D +R+W S S
Sbjct: 408 GDRTVCLWDVEAGEQKLIL--HTDDGVT--TVMFSPDGQFIAAGSLDKVIRIWTS-SGTL 462
Query: 434 VGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLK----AKAV 489
V GH +V +VAFS +LVSGS D+TIK+W +S+ A P K K
Sbjct: 463 VEQLHGHEESVYSVAFSPD-GKYLVSGSLDNTIKLWELQCVSNVA--PSMYKEGGICKQT 519
Query: 490 VAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLV-SVVTFRGHKRGIWSVEFSPVD 548
H I S+ V+P+ + +GS+DRT W PD S +T +GH + SV SP
Sbjct: 520 FTGHKDFILSVTVSPDGKWIISGSKDRTIQFWS-PDSPHSQLTLQGHNNSVISVAVSPNG 578
Query: 549 QVVITASGDKTIKIWSISD 567
T SGD +IWS D
Sbjct: 579 HCFATGSGDLRARIWSYED 597
Score = 231 (86.4 bits), Expect = 7.9e-16, P = 7.9e-16
Identities = 73/255 (28%), Positives = 117/255 (45%)
Query: 367 QYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLW 426
+YLA +Q++++D++ +L GH + + LD GK L V+GS D +V LW
Sbjct: 359 KYLATGVEDQQIRIWDIAQKRVYRLLTGHEQEIYSLDFS--KDGKTL-VSGSGDRTVCLW 415
Query: 427 D---SESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMN 483
D E + + G V V FS Q F+ +GS D I++W+ G EQ
Sbjct: 416 DVEAGEQKLILHTDDG----VTTVMFSPDGQ-FIAAGSLDKVIRIWTSSGTL--VEQ--- 465
Query: 484 LKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVV------------T 531
+ H + + S+A +P+ + +GS D T +W L + +V T
Sbjct: 466 ------LHGHEESVYSVAFSPDGKYLVSGSLDNTIKLWELQCVSNVAPSMYKEGGICKQT 519
Query: 532 FRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGA 591
F GHK I SV SP + +I+ S D+TI+ WS T +GH +SV+ + G
Sbjct: 520 FTGHKDFILSVTVSPDGKWIISGSKDRTIQFWSPDSPHSQLTLQGHNNSVISVAVSPNGH 579
Query: 592 QIVSCGADGLVKLWT 606
+ D ++W+
Sbjct: 580 CFATGSGDLRARIWS 594
Score = 225 (84.3 bits), Expect = 3.6e-15, P = 3.6e-15
Identities = 54/197 (27%), Positives = 93/197 (47%)
Query: 28 SSDGSFIACACGESINIVDLSNASI------KSTIEGGSDTITALALSPDDKLLFSSGHS 81
S+DG F+A C + + ++ + +S+ G + ++A SPD K L +
Sbjct: 308 SADGKFLATGCNRAAMVFNVETGKLITLLQEESSKREGDLYVRSVAFSPDGKYLATGVED 367
Query: 82 REIRVWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFK 141
++IR+WD++ + R GH+ + G L + DR V +WDV+ G
Sbjct: 368 QQIRIWDIAQKRVYRLLTGHEQEIYSLDFSKDGKTLVSGSGDRTVCLWDVEAGEQKLILH 427
Query: 142 GHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGS 201
GV ++++F PD + +GS D +R+W + V L H V S+A + DG
Sbjct: 428 TDDGV-TTVMFSPDGQ--FIAAGSLDKVIRIWTS-SGTLVEQLHGHEESVYSVAFSPDGK 483
Query: 202 TLISAGRDKVVNLWDLR 218
L+S D + LW+L+
Sbjct: 484 YLVSGSLDNTIKLWELQ 500
Score = 194 (73.4 bits), Expect = 8.8e-12, P = 8.8e-12
Identities = 60/231 (25%), Positives = 96/231 (41%)
Query: 28 SSDGSFIACAC-GESINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRV 86
S DG ++A + I I D++ + + G I +L S D K L S R + +
Sbjct: 355 SPDGKYLATGVEDQQIRIWDIAQKRVYRLLTGHEQEIYSLDFSKDGKTLVSGSGDRTVCL 414
Query: 87 WDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGV 146
WD+ + DG M P G +A D+ + +W G GH+
Sbjct: 415 WDVEAGEQKLILHTDDGVTTVMFS-PDGQFIAAGSLDKVIRIW-TSSGTLVEQLHGHEES 472
Query: 147 VSSILFHPDTDKSLLFSGSDDATVRVWDL---------LAKK---CVATLDKHFSRVTSM 194
V S+ F PD L SGS D T+++W+L + K+ C T H + S+
Sbjct: 473 VYSVAFSPDG--KYLVSGSLDNTIKLWELQCVSNVAPSMYKEGGICKQTFTGHKDFILSV 530
Query: 195 AITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYE-MVEAVCAIPPGSAF 244
++ DG +IS +D+ + W +LT+ + V +V P G F
Sbjct: 531 TVSPDGKWIISGSKDRTIQFWSPDSPHSQLTLQGHNNSVISVAVSPNGHCF 581
Score = 187 (70.9 bits), Expect = 5.1e-11, P = 5.1e-11
Identities = 55/217 (25%), Positives = 92/217 (42%)
Query: 17 QQFYGGGPLVVSSDGSFIACACGE-SINIVDLSNASIKSTIEGGSDTITALALSPDDKLL 75
Q+ Y L S DG + G+ ++ + D+ A + I D +T + SPD + +
Sbjct: 389 QEIYS---LDFSKDGKTLVSGSGDRTVCLWDVE-AGEQKLILHTDDGVTTVMFSPDGQFI 444
Query: 76 FSSGHSREIRVWDLS-TLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDV--- 131
+ + IR+W S TL + GH+ +A P G L + D + +W++
Sbjct: 445 AAGSLDKVIRIWTSSGTL--VEQLHGHEESVYSVAFSPDGKYLVSGSLDNTIKLWELQCV 502
Query: 132 ---------DGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVA 182
+GG C F GHK + S+ PD + SGS D T++ W +
Sbjct: 503 SNVAPSMYKEGGICKQTFTGHKDFILSVTVSPDG--KWIISGSKDRTIQFWSPDSPHSQL 560
Query: 183 TLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRD 219
TL H + V S+A++ +G + D +W D
Sbjct: 561 TLQGHNNSVISVAVSPNGHCFATGSGDLRARIWSYED 597
Score = 149 (57.5 bits), Expect = 2.4e-17, Sum P(2) = 2.4e-17
Identities = 42/134 (31%), Positives = 63/134 (47%)
Query: 114 GGLLATAGADRKVLVWDVDGG----FCTHYFKGHKG--VVSSILFHPDTDKSLLFSGSDD 167
G LAT G +R +V++V+ G +G V S+ F PD L +G +D
Sbjct: 311 GKFLAT-GCNRAAMVFNVETGKLITLLQEESSKREGDLYVRSVAFSPDG--KYLATGVED 367
Query: 168 ATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVP 227
+R+WD+ K+ L H + S+ + DG TL+S D+ V LWD+ KL +
Sbjct: 368 QQIRIWDIAQKRVYRLLTGHEQEIYSLDFSKDGKTLVSGSGDRTVCLWDVEAGEQKLILH 427
Query: 228 TYEMVEAVCAIPPG 241
T + V V P G
Sbjct: 428 TDDGVTTVMFSPDG 441
Score = 148 (57.2 bits), Expect = 2.4e-17, Sum P(2) = 2.4e-17
Identities = 53/193 (27%), Positives = 88/193 (45%)
Query: 347 KRLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCA 406
++L+ + ++ + + Q++A + + ++++ SS + L GH E V + A
Sbjct: 422 QKLILHTDDGVTTVMFSPDGQFIAAGSLDKVIRIWT-SSGTLVEQLHGHEESVYSV---A 477
Query: 407 LS-SGKILIVTGSKDNSVRLWD------------SESRCCVGVGTGHMGAVGAVAFSKKL 453
S GK L V+GS DN+++LW+ E C TGH + +V S
Sbjct: 478 FSPDGKYL-VSGSLDNTIKLWELQCVSNVAPSMYKEGGICKQTFTGHKDFILSVTVSPD- 535
Query: 454 QNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGS 513
+++SGS D TI+ WS D + L+ H + S+AV+PN TGS
Sbjct: 536 GKWIISGSKDRTIQFWS----PDSPHSQLTLQG------HNNSVISVAVSPNGHCFATGS 585
Query: 514 QDRTACVWRLPDL 526
D A +W DL
Sbjct: 586 GDLRARIWSYEDL 598
Score = 133 (51.9 bits), Expect = 3.8e-05, P = 3.8e-05
Identities = 45/190 (23%), Positives = 79/190 (41%)
Query: 467 KVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPD- 525
K W+ + E P++++ + H I + + + + TG +R A V+ +
Sbjct: 273 KDWTVTSNVPNKEPPISVQLLHTLE-HTSVICYVRFSADGKFLATGC-NRAAMVFNVETG 330
Query: 526 -LVSVVTFRGHKR-G---IWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSS 580
L++++ KR G + SV FSP + + T D+ I+IW I+ + GH
Sbjct: 331 KLITLLQEESSKREGDLYVRSVAFSPDGKYLATGVEDQQIRIWDIAQKRVYRLLTGHEQE 390
Query: 581 VLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGS 640
+ F G +VS D V LW V GE +D + + + A G
Sbjct: 391 IYSLDFSKDGKTLVSGSGDRTVCLWDVEAGEQKLILHT-DDGVTTVMFSPDGQFIAAGSL 449
Query: 641 DALVNLWHDS 650
D ++ +W S
Sbjct: 450 DKVIRIWTSS 459
>TAIR|locus:2202129 [details] [associations]
symbol:AT1G11160 "AT1G11160" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
EMBL:CP002684 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GO:GO:0080008 GO:GO:0008352 PANTHER:PTHR19845 IPI:IPI00528177
RefSeq:NP_172582.2 UniGene:At.43445 ProteinModelPortal:F4I7E1
SMR:F4I7E1 PRIDE:F4I7E1 EnsemblPlants:AT1G11160.1 GeneID:837657
KEGG:ath:AT1G11160 OMA:DETHATQ Uniprot:F4I7E1
Length = 1021
Score = 265 (98.3 bits), Expect = 4.0e-19, P = 4.0e-19
Identities = 57/208 (27%), Positives = 96/208 (46%)
Query: 440 HMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINS 499
H G V ++ KK L++G D+ + +WS + PM+L H ++S
Sbjct: 14 HSGNVNCLSIGKKTSRLLLTGGDDYKVNLWSIGKTTS----PMSL------CGHTSPVDS 63
Query: 500 LAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKT 559
+A + LV G+ +W L + V F GH+ +VEF P + + + S D
Sbjct: 64 VAFNSEEVLVLAGASSGVIKLWDLEESKMVRAFTGHRSNCSAVEFHPFGEFLASGSSDTN 123
Query: 560 IKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKH 619
+++W C++T++GHT + F G +VS G D +VK+W + G+ + + H
Sbjct: 124 LRVWDTRKKGCIQTYKGHTRGISTIEFSPDGRWVVSGGLDNVVKVWDLTAGKLLHEFKCH 183
Query: 620 EDKIWALAVGKKTEMFATGGSDALVNLW 647
E I +L + ATG +D V W
Sbjct: 184 EGPIRSLDFHPLEFLLATGSADRTVKFW 211
Score = 228 (85.3 bits), Expect = 4.2e-15, P = 4.2e-15
Identities = 56/190 (29%), Positives = 87/190 (45%)
Query: 34 IACACGESINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLK 93
+A A I + DL + + G +A+ P + L S +RVWD
Sbjct: 74 LAGASSGVIKLWDLEESKMVRAFTGHRSNCSAVEFHPFGEFLASGSSDTNLRVWDTRKKG 133
Query: 94 CLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFH 153
C++++KGH + P G + + G D V VWD+ G H FK H+G + S+ FH
Sbjct: 134 CIQTYKGHTRGISTIEFSPDGRWVVSGGLDNVVKVWDLTAGKLLHEFKCHEGPIRSLDFH 193
Query: 154 PDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVN 213
P + LL +GS D TV+ WDL + + T + V ++A DG TL G D +
Sbjct: 194 PL--EFLLATGSADRTVKFWDLETFELIGTTRPEATGVRAIAFHPDGQTLF-CGLDDGLK 250
Query: 214 LWDLRDYSCK 223
++ C+
Sbjct: 251 VYSWEPVICR 260
Score = 228 (85.3 bits), Expect = 4.2e-15, P = 4.2e-15
Identities = 61/236 (25%), Positives = 106/236 (44%)
Query: 42 INIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGH 101
+N+ + + ++ G + + ++A + ++ L+ + S I++WDL K +R++ GH
Sbjct: 40 VNLWSIGKTTSPMSLCGHTSPVDSVAFNSEEVLVLAGASSGVIKLWDLEESKMVRAFTGH 99
Query: 102 DGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLL 161
+ HP G LA+ +D + VWD C +KGH +S+I F PD +
Sbjct: 100 RSNCSAVEFHPFGEFLASGSSDTNLRVWDTRKKGCIQTYKGHTRGISTIEFSPDG--RWV 157
Query: 162 FSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYS 221
SG D V+VWDL A K + H + S+ L + D+ V WDL +
Sbjct: 158 VSGGLDNVVKVWDLTAGKLLHEFKCHEGPIRSLDFHPLEFLLATGSADRTVKFWDLETFE 217
Query: 222 C-KLTVPTYEMVEAVCAIPPGSAF----DSFLSSYNQQTIKKKRRSLEIHFITVGE 272
T P V A+ P G D L Y+ + + R +++ + T+G+
Sbjct: 218 LIGTTRPEATGVRAIAFHPDGQTLFCGLDDGLKVYSWEPVIC-RDGVDMGWSTLGD 272
Score = 227 (85.0 bits), Expect = 5.3e-15, P = 5.3e-15
Identities = 61/230 (26%), Positives = 108/230 (46%)
Query: 377 QVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGV 436
+V ++ + + L GH+ V D+ A +S ++L++ G+ ++LWD E V
Sbjct: 39 KVNLWSIGKTTSPMSLCGHTSPV---DSVAFNSEEVLVLAGASSGVIKLWDLEESKMVRA 95
Query: 437 GTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKD 496
TGH AV F FL SGSSD ++VW D + ++ H +
Sbjct: 96 FTGHRSNCSAVEFHP-FGEFLASGSSDTNLRVW-------DTRKKGCIQT---YKGHTRG 144
Query: 497 INSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASG 556
I+++ +P+ V +G D VW L + F+ H+ I S++F P++ ++ T S
Sbjct: 145 ISTIEFSPDGRWVVSGGLDNVVKVWDLTAGKLLHEFKCHEGPIRSLDFHPLEFLLATGSA 204
Query: 557 DKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWT 606
D+T+K W + + T + V +F G Q + CG D +K+++
Sbjct: 205 DRTVKFWDLETFELIGTTRPEATGVRAIAFHPDG-QTLFCGLDDGLKVYS 253
Score = 216 (81.1 bits), Expect = 8.3e-14, P = 8.3e-14
Identities = 49/160 (30%), Positives = 79/160 (49%)
Query: 60 SDTITALALSPD-DKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLA 118
S + L++ +LL + G ++ +W + S GH P +A + S +L
Sbjct: 15 SGNVNCLSIGKKTSRLLLTGGDDYKVNLWSIGKTTSPMSLCGHTSPVDSVAFN-SEEVLV 73
Query: 119 TAGADRKVL-VWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLA 177
AGA V+ +WD++ F GH+ S++ FHP + L SGS D +RVWD
Sbjct: 74 LAGASSGVIKLWDLEESKMVRAFTGHRSNCSAVEFHPFGE--FLASGSSDTNLRVWDTRK 131
Query: 178 KKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDL 217
K C+ T H ++++ + DG ++S G D VV +WDL
Sbjct: 132 KGCIQTYKGHTRGISTIEFSPDGRWVVSGGLDNVVKVWDL 171
Score = 109 (43.4 bits), Expect = 2.6e-08, Sum P(2) = 2.6e-08
Identities = 33/122 (27%), Positives = 54/122 (44%)
Query: 134 GFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTS 193
G+ F H G V+ + T + LL +G DD V +W + +L H S V S
Sbjct: 5 GYKLQEFVAHSGNVNCLSIGKKTSR-LLLTGGDDYKVNLWSIGKTTSPMSLCGHTSPVDS 63
Query: 194 MAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYEMVEAVCAIPPGSAFDSFLSSYNQ 253
+A S+ +++ V+ LWDL + K+ V + + C+ F FL+S +
Sbjct: 64 VAFNSEEVLVLAGASSGVIKLWDLEE--SKM-VRAFTGHRSNCSAVEFHPFGEFLASGSS 120
Query: 254 QT 255
T
Sbjct: 121 DT 122
Score = 108 (43.1 bits), Expect = 2.6e-08, Sum P(2) = 2.6e-08
Identities = 27/106 (25%), Positives = 50/106 (47%)
Query: 367 QYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLW 426
++LA ++ ++V+D C GH+ + T S +V+G DN V++W
Sbjct: 113 EFLASGSSDTNLRVWDTRKKGCIQTYKGHTRGI---STIEFSPDGRWVVSGGLDNVVKVW 169
Query: 427 DSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFD 472
D + + H G + ++ F L+ L +GS+D T+K W +
Sbjct: 170 DLTAGKLLHEFKCHEGPIRSLDFHP-LEFLLATGSADRTVKFWDLE 214
>UNIPROTKB|Q5RD06 [details] [associations]
symbol:POC1B "POC1 centriolar protein homolog B"
species:9601 "Pongo abelii" [GO:0005814 "centriole" evidence=ISS]
[GO:0005932 "microtubule basal body" evidence=ISS] [GO:0042384
"cilium assembly" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
HOVERGEN:HBG057502 KO:K16482 CTD:282809 EMBL:CR858112
RefSeq:NP_001125169.1 UniGene:Pab.14153 ProteinModelPortal:Q5RD06
GeneID:100172056 KEGG:pon:100172056 Uniprot:Q5RD06
Length = 451
Score = 257 (95.5 bits), Expect = 4.5e-19, P = 4.5e-19
Identities = 76/304 (25%), Positives = 134/304 (44%)
Query: 344 ILSKRLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLD 403
+L + G+ I L L + LA A+ + +++ + +Y GH ++V +
Sbjct: 9 VLERYFKGHKAAITSLD-LSPNGKQLATASWDTFLMLWNFKPHARAYRYVGHKDVVTSVQ 67
Query: 404 TCALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSD 463
S L+ + S+D +VRLW + R H V +V FS Q FL + S D
Sbjct: 68 ---FSPHGNLLASASRDRTVRLWIPDKRGKFSEFKAHTAPVRSVDFSADGQ-FLATASED 123
Query: 464 HTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRL 523
+IKVWS + + H + +P+ L+ + S+D+T +W
Sbjct: 124 KSIKVWSM----------YRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDT 173
Query: 524 PDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLR 583
+ V F V+F+P + +A D+T+K+W + L+ ++ H+ V
Sbjct: 174 TNKQCVNNFSDSVGFANFVDFNPSGTCIASAGSDQTVKVWDVRVNKLLQHYQVHSGGVNC 233
Query: 584 ASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDAL 643
SF +V+ +DG +K+ + G I T H ++ ++ K E+FA+GG+D
Sbjct: 234 ISFHPSDNYLVTASSDGTLKILDLLEGRLIYTLQGHTGPVFTVSFSKGGELFASGGADTQ 293
Query: 644 VNLW 647
V LW
Sbjct: 294 VLLW 297
Score = 247 (92.0 bits), Expect = 6.1e-18, P = 6.1e-18
Identities = 59/199 (29%), Positives = 102/199 (51%)
Query: 28 SSDGSFIACACGE-SINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRV 86
S+DG F+A A + SI + + ++ + + SPD +L+ S + I++
Sbjct: 111 SADGQFLATASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKI 170
Query: 87 WDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGV 146
WD + +C+ ++ G A + +PSG +A+AG+D+ V VWDV +++ H G
Sbjct: 171 WDTTNKQCVNNFSDSVGFANFVDFNPSGTCIASAGSDQTVKVWDVRVNKLLQHYQVHSGG 230
Query: 147 VSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISA 206
V+ I FHP +D L+ + S D T+++ DLL + + TL H V +++ + G S
Sbjct: 231 VNCISFHP-SDNYLV-TASSDGTLKILDLLEGRLIYTLQGHTGPVFTVSFSKGGELFASG 288
Query: 207 GRDKVVNLW--DLRDYSCK 223
G D V LW + + CK
Sbjct: 289 GADTQVLLWRTNFDELHCK 307
Score = 212 (79.7 bits), Expect = 5.0e-14, P = 5.0e-14
Identities = 71/264 (26%), Positives = 114/264 (43%)
Query: 348 RLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCAL 407
R VG+ + + ++F LA A+ V+++ H+ V +D A
Sbjct: 55 RYVGHKDVVTSVQF-SPHGNLLASASRDRTVRLWIPDKRGKFSEFKAHTAPVRSVDFSA- 112
Query: 408 SSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIK 467
G+ L T S+D S+++W + + H V FS +VS S D TIK
Sbjct: 113 -DGQFL-ATASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPD-GRLIVSCSEDKTIK 169
Query: 468 VWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLV 527
+W +Q +N + +V A+ D N P+ + + + D+T VW +
Sbjct: 170 IWDTTN-----KQCVNNFSDSVGFANFVDFN-----PSGTCIASAGSDQTVKVWDVRVNK 219
Query: 528 SVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFL 587
+ ++ H G+ + F P D ++TAS D T+KI + +G + T +GHT V SF
Sbjct: 220 LLQHYQVHSGGVNCISFHPSDNYLVTASSDGTLKILDLLEGRLIYTLQGHTGPVFTVSFS 279
Query: 588 TRGAQIVSCGADGLVKLWTVRTGE 611
G S GAD V LW E
Sbjct: 280 KGGELFASGGADTQVLLWRTNFDE 303
Score = 206 (77.6 bits), Expect = 2.3e-13, P = 2.3e-13
Identities = 54/212 (25%), Positives = 93/212 (43%)
Query: 13 EPVLQQFYGGGPLVVSS-----DGSFIACACGESINIV-DLSNASIKSTIEGGSDTITAL 66
+PVL++++ G ++S +G +A A ++ ++ + + G D +T++
Sbjct: 7 DPVLERYFKGHKAAITSLDLSPNGKQLATASWDTFLMLWNFKPHARAYRYVGHKDVVTSV 66
Query: 67 ALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKV 126
SP LL S+ R +R+W +K H P + G LATA D+ +
Sbjct: 67 QFSPHGNLLASASRDRTVRLWIPDKRGKFSEFKAHTAPVRSVDFSADGQFLATASEDKSI 126
Query: 127 LVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDK 186
VW + + H V F PD L+ S S+D T+++WD K+CV
Sbjct: 127 KVWSMYRQRFLYSLYRHTHWVRCAKFSPDG--RLIVSCSEDKTIKIWDTTNKQCVNNFSD 184
Query: 187 HFSRVTSMAITSDGSTLISAGRDKVVNLWDLR 218
+ G+ + SAG D+ V +WD+R
Sbjct: 185 SVGFANFVDFNPSGTCIASAGSDQTVKVWDVR 216
Score = 199 (75.1 bits), Expect = 1.4e-12, P = 1.4e-12
Identities = 48/168 (28%), Positives = 78/168 (46%)
Query: 57 EGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPSGGL 116
+G IT+L LSP+ K L ++ + +W+ + GH + P G L
Sbjct: 15 KGHKAAITSLDLSPNGKQLATASWDTFLMLWNFKPHARAYRYVGHKDVVTSVQFSPHGNL 74
Query: 117 LATAGADRKVLVW--DVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWD 174
LA+A DR V +W D G F FK H V S+ F D L + S+D +++VW
Sbjct: 75 LASASRDRTVRLWIPDKRGKFSE--FKAHTAPVRSVDF--SADGQFLATASEDKSIKVWS 130
Query: 175 LLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSC 222
+ ++ + +L +H V + DG ++S DK + +WD + C
Sbjct: 131 MYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQC 178
Score = 164 (62.8 bits), Expect = 9.9e-09, P = 9.9e-09
Identities = 50/165 (30%), Positives = 76/165 (46%)
Query: 96 RSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPD 155
R +KGH + P+G LATA D +++W+ + + GHK VV+S+ F P
Sbjct: 12 RYFKGHKAAITSLDLSPNGKQLATASWDTFLMLWNFKPHARAYRYVGHKDVVTSVQFSPH 71
Query: 156 TDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLW 215
+ LL S S D TVR+W + + H + V S+ ++DG L +A DK + +W
Sbjct: 72 GN--LLASASRDRTVRLWIPDKRGKFSEFKAHTAPVRSVDFSADGQFLATASEDKSIKVW 129
Query: 216 DLRDYSCKLTVPTYEMVEAV-CA--IPPGSAFDSFLSSYNQQTIK 257
+ Y + Y V CA P G +S +TIK
Sbjct: 130 SM--YRQRFLYSLYRHTHWVRCAKFSPDGRLI---VSCSEDKTIK 169
Score = 147 (56.8 bits), Expect = 7.2e-07, P = 7.2e-07
Identities = 35/155 (22%), Positives = 66/155 (42%)
Query: 63 ITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGA 122
+ ++ S D + L ++ + I+VW + + L S H P G L+ +
Sbjct: 105 VRSVDFSADGQFLATASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSE 164
Query: 123 DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVA 182
D+ + +WD C + F G + + F+P + + S D TV+VWD+ K +
Sbjct: 165 DKTIKIWDTTNKQCVNNFSDSVGFANFVDFNPSG--TCIASAGSDQTVKVWDVRVNKLLQ 222
Query: 183 TLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDL 217
H V ++ + L++A D + + DL
Sbjct: 223 HYQVHSGGVNCISFHPSDNYLVTASSDGTLKILDL 257
>ASPGD|ASPL0000046644 [details] [associations]
symbol:AN2021 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:BN001307 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:AACD01000032 InterPro:IPR011047 SUPFAM:SSF50998
InterPro:IPR007111 PROSITE:PS50837 RefSeq:XP_659625.1
ProteinModelPortal:Q5BBQ9 EnsemblFungi:CADANIAT00008689
GeneID:2875333 KEGG:ani:AN2021.2 OMA:KQVLKGH OrthoDB:EOG412QDH
Uniprot:Q5BBQ9
Length = 1311
Score = 233 (87.1 bits), Expect = 5.6e-19, Sum P(2) = 5.6e-19
Identities = 72/246 (29%), Positives = 119/246 (48%)
Query: 406 ALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHT 465
A+SS IV+GS + +V+LWD+ + + T G G+VAFS + + +G D
Sbjct: 823 AISSDGRQIVSGSIE-AVKLWDAATGDLLK--TLASGFAGSVAFSPDSRQ-IAAGFKDGK 878
Query: 466 IKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPD 525
I +W DA + + + H I S+A +P+ + T S D T W +
Sbjct: 879 IFIW-------DAAGTL----QKTLERHPGAIMSIAFSPDVKQLVTCSTDSTIKRWDIT- 926
Query: 526 LVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRAS 585
+ V GH + + ++ SP +V+ + S DKTIK+W + G KT GH +V +
Sbjct: 927 IGGVQEAVGHSKHVTTMVLSPDGKVIASGSADKTIKLWDAATGDLQKTLTGHLDTVEKVV 986
Query: 586 FLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVN 645
F QIVSC ++ VK+W TG+ +++ +D +AV + A+G + +
Sbjct: 987 FSLDNRQIVSCSSEA-VKIWDAATGKVQNSFES-DDVFTIVAVSPDGKHIASGHCNGRIK 1044
Query: 646 LWHDST 651
LW +T
Sbjct: 1045 LWDMAT 1050
Score = 206 (77.6 bits), Expect = 1.4e-12, P = 1.4e-12
Identities = 106/477 (22%), Positives = 199/477 (41%)
Query: 13 EPVLQQFYGGGPLVVSSDGSFIACACGES-----INIVDLSNASIKSTIEGGSDTITALA 67
+P Q YG S+D IA A G S I + D + ++ ++G S + +A
Sbjct: 723 QPPEQGGYGLHAGAFSADCKQIA-AFGWSRDSTCIMLFDTATGDLQKILKGHSHECSTMA 781
Query: 68 LSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVL 127
S D + L + +R+W+ +T +++ GH G + +A S G +G+ V
Sbjct: 782 FSSDSRQLVTGSVDCTVRLWNTTTGDLEKTFVGHTGTVLSVAIS-SDGRQIVSGSIEAVK 840
Query: 128 VWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKH 187
+WD G G S+ F PD+ + + +G D + +WD A TL++H
Sbjct: 841 LWDAATGDLLKTLAS--GFAGSVAFSPDSRQ--IAAGFKDGKIFIWDA-AGTLQKTLERH 895
Query: 188 FSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYEMVEAVCAIPPGSAF--- 244
+ S+A + D L++ D + WD+ + V + V + P G
Sbjct: 896 PGAIMSIAFSPDVKQLVTCSTDSTIKRWDITIGGVQEAVGHSKHVTTMVLSPDGKVIASG 955
Query: 245 --DSFLSSYN------QQTIKKKRRSLEIHFITVGERGIVRMWNADSACLYEQKSSDVTI 296
D + ++ Q+T+ ++E ++ R IV ++++ +++ + V
Sbjct: 956 SADKTIKLWDAATGDLQKTLTGHLDTVEKVVFSLDNRQIVSC-SSEAVKIWDAATGKVQN 1014
Query: 297 SFEMDDSKRGFTAATVLPSNQGLLCVTADQQLLLYTTVEVPEKKMELILSKRLVGYNEEI 356
SFE DD FT V P + + + ++ L+ L K + GY +
Sbjct: 1015 SFESDDV---FTIVAVSPDGKHIASGHCNGRIKLWDMATGS-------LLKTMAGYRSKF 1064
Query: 357 LDLKFLGEEEQYLAVATNIEQVQVYDLS-SMSCSYVLAGHSEIVLCLDTCALSSGKILIV 415
L + E + + I Q+ L S +L+ ++ + L A +G +
Sbjct: 1065 DSL--VTTEVFDIQLQEAIFNTQITGLVFSPDAKLILSTSTDRAIKLWDAA--TGDLQKR 1120
Query: 416 TGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFD 472
+S+ + D+ SR +G+ + +VAFS Q+ + + S+D TI+VWS +
Sbjct: 1121 LPCHSDSI-ITDAFSR-----SSGYPNWIFSVAFSSDGQH-IAAASADKTIRVWSIE 1170
Score = 203 (76.5 bits), Expect = 9.7e-16, Sum P(2) = 9.7e-16
Identities = 76/296 (25%), Positives = 133/296 (44%)
Query: 357 LDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCL-----DTCALSSGK 411
L+ F+G L+VA + + Q+ S + A +++ L + A S
Sbjct: 808 LEKTFVGHTGTVLSVAISSDGRQIVSGSIEAVKLWDAATGDLLKTLASGFAGSVAFSPDS 867
Query: 412 ILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSF 471
I G KD + +WD+ + H GA+ ++AFS ++ LV+ S+D TIK W
Sbjct: 868 RQIAAGFKDGKIFIWDAAGTLQKTLER-HPGAIMSIAFSPDVKQ-LVTCSTDSTIKRWD- 924
Query: 472 DGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLP--DLVSV 529
++ Q +AV H K + ++ ++P+ ++ +GS D+T +W DL
Sbjct: 925 --ITIGGVQ------EAV--GHSKHVTTMVLSPDGKVIASGSADKTIKLWDAATGDLQKT 974
Query: 530 VTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTR 589
+T GH + V FS ++ +++ S + +KIW + G +FE + A
Sbjct: 975 LT--GHLDTVEKVVFSLDNRQIVSCSSE-AVKIWDAATGKVQNSFESDDVFTIVA-VSPD 1030
Query: 590 GAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVN 645
G I S +G +KLW + TG + T + K +L TE+F +A+ N
Sbjct: 1031 GKHIASGHCNGRIKLWDMATGSLLKTMAGYRSKFDSLVT---TEVFDIQLQEAIFN 1083
Score = 174 (66.3 bits), Expect = 1.3e-12, Sum P(2) = 1.3e-12
Identities = 72/290 (24%), Positives = 132/290 (45%)
Query: 345 LSKRLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDT 404
L K L + I+ + F + +Q + +T+ ++ +D++ + GHS+ V T
Sbjct: 888 LQKTLERHPGAIMSIAFSPDVKQLVTCSTD-STIKRWDITIGGVQEAV-GHSKHVT---T 942
Query: 405 CALS-SGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSD 463
LS GK+ I +GS D +++LWD+ + TGH+ V V FS L N + S
Sbjct: 943 MVLSPDGKV-IASGSADKTIKLWDAATGDLQKTLTGHLDTVEKVVFS--LDNRQIVSCSS 999
Query: 464 HTIKVW-SFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSL--VCTGSQDRTACV 520
+K+W + G ++ + ++ V+ GK I S L + TGS +T
Sbjct: 1000 EAVKIWDAATGKVQNSFESDDVFTIVAVSPDGKHIASGHCNGRIKLWDMATGSLLKTMAG 1059
Query: 521 WR--LPDLVSVVTFRGH-KRGIWSVE-----FSPVDQVVITASGDKTIKIWSISDGSCLK 572
+R LV+ F + I++ + FSP +++++ S D+ IK+W + G K
Sbjct: 1060 YRSKFDSLVTTEVFDIQLQEAIFNTQITGLVFSPDAKLILSTSTDRAIKLWDAATGDLQK 1119
Query: 573 TFEGHTSSVL-----RAS----------FLTRGAQIVSCGADGLVKLWTV 607
H+ S++ R+S F + G I + AD +++W++
Sbjct: 1120 RLPCHSDSIITDAFSRSSGYPNWIFSVAFSSDGQHIAAASADKTIRVWSI 1169
Score = 163 (62.4 bits), Expect = 6.1e-08, P = 6.1e-08
Identities = 73/322 (22%), Positives = 133/322 (41%)
Query: 349 LVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAG-HSEIVLCLD---- 403
L G++E + + F + +Q +A ++ ++++D ++ S L+G H + +
Sbjct: 616 LTGHSEAVWRVAFSPDGKQ-IASGSDSGLIKLWDTTTGSLQKTLSGSHPKRRYQIQQEQV 674
Query: 404 -TCALSSGKILIVTGSKDNSVRLWDS------ESRCCVGVGTGH--------MGAVG--A 446
A LI++G D SV LWD+ E G+ + G G A
Sbjct: 675 KAMAFLPDSKLIISGYYDGSVMLWDTTTGDRQEIADHFGISKVNYTYLQPPEQGGYGLHA 734
Query: 447 VAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPND 506
AFS + G S + + FD + D ++ ++ H + +++A + +
Sbjct: 735 GAFSADCKQIAAFGWSRDSTCIMLFDTATGDLQK--------ILKGHSHECSTMAFSSDS 786
Query: 507 SLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSIS 566
+ TGS D T +W TF GH + SV S + +++ S + +K+W +
Sbjct: 787 RQLVTGSVDCTVRLWNTTTGDLEKTFVGHTGTVLSVAISSDGRQIVSGSIE-AVKLWDAA 845
Query: 567 DGSCLKTF-EGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWA 625
G LKT G SV +F QI + DG + +W G T ++H I +
Sbjct: 846 TGDLLKTLASGFAGSV---AFSPDSRQIAAGFKDGKIFIWDA-AGTLQKTLERHPGAIMS 901
Query: 626 LAVGKKTEMFATGGSDALVNLW 647
+A + T +D+ + W
Sbjct: 902 IAFSPDVKQLVTCSTDSTIKRW 923
Score = 107 (42.7 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 26/98 (26%), Positives = 45/98 (45%)
Query: 555 SGDKT-IKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECI 613
S D T I ++ + G K +GH+ +F + Q+V+ D V+LW TG+
Sbjct: 750 SRDSTCIMLFDTATGDLQKILKGHSHECSTMAFSSDSRQLVTGSVDCTVRLWNTTTGDLE 809
Query: 614 ATYDKHEDKIWALAVGKKTEMFATGGSDALVNLWHDST 651
T+ H + ++A+ +G +A V LW +T
Sbjct: 810 KTFVGHTGTVLSVAISSDGRQIVSGSIEA-VKLWDAAT 846
Score = 85 (35.0 bits), Expect = 5.6e-19, Sum P(2) = 5.6e-19
Identities = 27/84 (32%), Positives = 35/84 (41%)
Query: 142 GHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLD-KHFSR--------VT 192
GH V + F PD + + SGSD +++WD TL H R V
Sbjct: 618 GHSEAVWRVAFSPDGKQ--IASGSDSGLIKLWDTTTGSLQKTLSGSHPKRRYQIQQEQVK 675
Query: 193 SMAITSDGSTLISAGRDKVVNLWD 216
+MA D +IS D V LWD
Sbjct: 676 AMAFLPDSKLIISGYYDGSVMLWD 699
Score = 83 (34.3 bits), Expect = 9.0e-19, Sum P(2) = 9.0e-19
Identities = 26/89 (29%), Positives = 40/89 (44%)
Query: 55 TIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLST---LKCL------RSWKGHDGPA 105
T+ G S+ + +A SPD K + S S I++WD +T K L R ++
Sbjct: 615 TLTGHSEAVWRVAFSPDGKQIASGSDSGLIKLWDTTTGSLQKTLSGSHPKRRYQIQQEQV 674
Query: 106 IGMACHPSGGLLATAGADRKVLVWDVDGG 134
MA P L+ + D V++WD G
Sbjct: 675 KAMAFLPDSKLIISGYYDGSVMLWDTTTG 703
Score = 78 (32.5 bits), Expect = 3.0e-18, Sum P(2) = 3.0e-18
Identities = 26/101 (25%), Positives = 44/101 (43%)
Query: 5 PLKKSYGCEPVLQQFYGGGPLV----VSSDGSFIACACGES-INIVDLSNASIKSTIEGG 59
P++ S+ P++Q G V S DG IA I + D + S++ T+ G
Sbjct: 604 PMEDSW--TPMIQTLTGHSEAVWRVAFSPDGKQIASGSDSGLIKLWDTTTGSLQKTLSGS 661
Query: 60 ---------SDTITALALSPDDKLLFSSGHSREIRVWDLST 91
+ + A+A PD KL+ S + + +WD +T
Sbjct: 662 HPKRRYQIQQEQVKAMAFLPDSKLIISGYYDGSVMLWDTTT 702
Score = 65 (27.9 bits), Expect = 6.7e-17, Sum P(2) = 6.7e-17
Identities = 28/127 (22%), Positives = 52/127 (40%)
Query: 64 TALALSPDDKLLFSSGHSREIRVW-------DLSTLKCLRSWKGHDGPAIGMACHPSGGL 116
+A+ SP+ ++ + ++ VW + S +++ GH +A P G
Sbjct: 576 SAIIFSPESSVV-KGENLHKVPVWLGRAPPMEDSWTPMIQTLTGHSEAVWRVAFSPDGKQ 634
Query: 117 LATAGADRKVLVWDVDGGFCTHYFKG-H--------KGVVSSILFHPDTDKSLLFSGSDD 167
+A+ + +WD G G H + V ++ F PD+ L+ SG D
Sbjct: 635 IASGSDSGLIKLWDTTTGSLQKTLSGSHPKRRYQIQQEQVKAMAFLPDS--KLIISGYYD 692
Query: 168 ATVRVWD 174
+V +WD
Sbjct: 693 GSVMLWD 699
Score = 59 (25.8 bits), Expect = 2.8e-16, Sum P(2) = 2.8e-16
Identities = 23/86 (26%), Positives = 36/86 (41%)
Query: 148 SSILFHPDTDKSLLFSGSDDATVRVWDLLAKKC-------VATLDKHFSRVTSMAITSDG 200
S+I+F P+ S + G + V VW A + TL H V +A + DG
Sbjct: 576 SAIIFSPE---SSVVKGENLHKVPVWLGRAPPMEDSWTPMIQTLTGHSEAVWRVAFSPDG 632
Query: 201 STLISAGRDKVVNLWDLRDYSCKLTV 226
+ S ++ LWD S + T+
Sbjct: 633 KQIASGSDSGLIKLWDTTTGSLQKTL 658
>POMBASE|SPBC16C6.13c [details] [associations]
symbol:sec27 "coatomer beta' subunit (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0006886
"intracellular protein transport" evidence=IC] [GO:0006888 "ER to
Golgi vesicle-mediated transport" evidence=ISO] [GO:0006890
"retrograde vesicle-mediated transport, Golgi to ER" evidence=ISO]
[GO:0030126 "COPI vesicle coat" evidence=ISO] [GO:0032511 "late
endosome to vacuole transport via multivesicular body sorting
pathway" evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 PomBase:SPBC16C6.13c
GO:GO:0005829 GO:GO:0005634 GO:GO:0006886 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005198 EMBL:CU329671
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CU329671_GR GO:GO:0006888 GO:GO:0030126 GO:GO:0006890
HOGENOM:HOG000163444 InterPro:IPR016453 PIRSF:PIRSF005567
OMA:LRNKAFG PIR:T39962 RefSeq:XP_001713153.1
ProteinModelPortal:O42937 STRING:O42937 EnsemblFungi:SPBC16C6.13c.1
GeneID:2540050 KEGG:spo:SPBC16C6.13c OrthoDB:EOG48H0BF
NextBio:20801187 GO:GO:0032511 Uniprot:O42937
Length = 796
Score = 262 (97.3 bits), Expect = 5.6e-19, P = 5.6e-19
Identities = 82/307 (26%), Positives = 140/307 (45%)
Query: 341 MELILSKRLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVL 400
M L ++L+ + E + + F E +A N QV +++ ++ + ++ +
Sbjct: 2 MRLDFQRKLLSHTERVKAVDFHPTEPWVIASHYN-GQVGIWNYNTQT---LVRSFDINDV 57
Query: 401 CLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSG 460
+ CA + K V GS D VR+++ + V H + A+ Q FL++
Sbjct: 58 PIRACAFIARKNWFVCGSDDFQVRVYNYNTGEKVTQFEAHPDYIRALVVHPT-QPFLLTS 116
Query: 461 SSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGS-QDRTAC 519
S D TIK +++D M+ K H + + SLA+ P D+ S D T
Sbjct: 117 SDDMTIKCFNWD---------MSWKCVQTFEGHSRYVMSLAINPKDTNTFASSCLDGTVK 167
Query: 520 VWRLPDLVSVVTFRGHKRGIWSVEFSPV-DQ-VVITASGDKTIKIWSISDGSCLKTFEGH 577
VW V+ T + H RG+ V + P D+ +ITA D IK+W +C++ EGH
Sbjct: 168 VWSFGSSVANFTLQAHDRGVNYVNYYPAGDKPYLITAGDDNLIKVWDYQTKACVRILEGH 227
Query: 578 TSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFAT 637
T++V A F ++ I+S DG VK+W + I +Y+ D+ W +A K +
Sbjct: 228 TNNVSFAFFHSKFPIIISGSEDGTVKIWHTLSYSLIKSYNFSLDRAWCIAQNKDNGLVTV 287
Query: 638 GGSDALV 644
G + L+
Sbjct: 288 GFDNGLI 294
Score = 210 (79.0 bits), Expect = 2.6e-13, P = 2.6e-13
Identities = 68/307 (22%), Positives = 124/307 (40%)
Query: 392 LAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSK 451
L H+E V +D + ++ + V +W+ ++ V + + A AF
Sbjct: 10 LLSHTERVKAVD---FHPTEPWVIASHYNGQVGIWNYNTQTLVRSFDINDVPIRACAFIA 66
Query: 452 KLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCT 511
+ +N+ V GS D ++V++++ E+ +A H I +L V P + T
Sbjct: 67 R-KNWFVCGSDDFQVRVYNYN----TGEKVTQFEA------HPDYIRALVVHPTQPFLLT 115
Query: 512 GSQDRTA-CV-WRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASG-DKTIKIWSISDG 568
S D T C W + V TF GH R + S+ +P D +S D T+K+WS
Sbjct: 116 SSDDMTIKCFNWDM-SWKCVQTFEGHSRYVMSLAINPKDTNTFASSCLDGTVKVWSFGSS 174
Query: 569 SCLKTFEGHTSSVLRASFLTRGAQ--IVSCGADGLVKLWTVRTGECIATYDKHEDKIWAL 626
T + H V ++ G + +++ G D L+K+W +T C+ + H + +
Sbjct: 175 VANFTLQAHDRGVNYVNYYPAGDKPYLITAGDDNLIKVWDYQTKACVRILEGHTNNVSFA 234
Query: 627 AVGKKTEMFATGGSDALVNLWHDSTXXXXXXXXXXXXXXVLRGQELENAVLDADYTKAIQ 686
K + +G D V +WH + Q +N ++ + +
Sbjct: 235 FFHSKFPIIISGSEDGTVKIWHTLSYSLIKSYNFSLDRAWCIAQNKDNGLVTVGFDNGL- 293
Query: 687 VAFELRR 693
+ F L R
Sbjct: 294 ITFSLGR 300
Score = 204 (76.9 bits), Expect = 1.1e-12, P = 1.1e-12
Identities = 50/190 (26%), Positives = 82/190 (43%)
Query: 38 CGES---INIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRV--WDLSTL 92
CG + + + + + E D I AL + P L +S I+ WD+S
Sbjct: 73 CGSDDFQVRVYNYNTGEKVTQFEAHPDYIRALVVHPTQPFLLTSSDDMTIKCFNWDMSW- 131
Query: 93 KCLRSWKGHDGPAIGMACHPSG-GLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSIL 151
KC+++++GH + +A +P A++ D V VW + H V+ +
Sbjct: 132 KCVQTFEGHSRYVMSLAINPKDTNTFASSCLDGTVKVWSFGSSVANFTLQAHDRGVNYVN 191
Query: 152 FHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKV 211
++P DK L + DD ++VWD K CV L+ H + V+ S +IS D
Sbjct: 192 YYPAGDKPYLITAGDDNLIKVWDYQTKACVRILEGHTNNVSFAFFHSKFPIIISGSEDGT 251
Query: 212 VNLWDLRDYS 221
V +W YS
Sbjct: 252 VKIWHTLSYS 261
Score = 178 (67.7 bits), Expect = 7.6e-10, P = 7.6e-10
Identities = 57/199 (28%), Positives = 91/199 (45%)
Query: 25 LVVSSDGSFIACACGESINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGH-SRE 83
L+ SSD I C N D+S ++ T EG S + +LA++P D F+S
Sbjct: 113 LLTSSDDMTIKC-----FNW-DMSWKCVQ-TFEGHSRYVMSLAINPKDTNTFASSCLDGT 165
Query: 84 IRVWDLSTLKCLRSWKGHDGPAIGMACHPSGG--LLATAGADRKVLVWDVDGGFCTHYFK 141
++VW + + + HD + +P+G L TAG D + VWD C +
Sbjct: 166 VKVWSFGSSVANFTLQAHDRGVNYVNYYPAGDKPYLITAGDDNLIKVWDYQTKACVRILE 225
Query: 142 GHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGS 201
GH VS FH + ++ SGS+D TV++W L+ + + + R +A D
Sbjct: 226 GHTNNVSFAFFH--SKFPIIISGSEDGTVKIWHTLSYSLIKSYNFSLDRAWCIAQNKDNG 283
Query: 202 TLISAGRDKVVNLWDL-RD 219
L++ G D + + L RD
Sbjct: 284 -LVTVGFDNGLITFSLGRD 301
Score = 160 (61.4 bits), Expect = 6.8e-08, P = 6.8e-08
Identities = 56/218 (25%), Positives = 99/218 (45%)
Query: 60 SDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLAT 119
++ + A+ P + + +S ++ ++ +W+ +T +RS+ +D P A
Sbjct: 14 TERVKAVDFHPTEPWVIASHYNGQVGIWNYNTQTLVRSFDINDVPIRACAFIARKNWFVC 73
Query: 120 AGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRV--WDLLA 177
D +V V++ + G F+ H + +++ HP T LL S SDD T++ WD+ +
Sbjct: 74 GSDDFQVRVYNYNTGEKVTQFEAHPDYIRALVVHP-TQPFLLTS-SDDMTIKCFNWDM-S 130
Query: 178 KKCVATLDKHFSRVTSMAIT-SDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYEM-VEAV 235
KCV T + H V S+AI D +T S+ D V +W T+ ++ V V
Sbjct: 131 WKCVQTFEGHSRYVMSLAINPKDTNTFASSCLDGTVKVWSFGSSVANFTLQAHDRGVNYV 190
Query: 236 CAIPPG-------SAFDSFLSSYNQQTIKKKRRSLEIH 266
P G + D+ + ++ QT K R LE H
Sbjct: 191 NYYPAGDKPYLITAGDDNLIKVWDYQT-KACVRILEGH 227
>UNIPROTKB|F1P5E8 [details] [associations]
symbol:FBXW11 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GeneTree:ENSGT00690000101849 EMBL:AADN02035964
EMBL:AADN02035965 EMBL:AADN02035966 IPI:IPI00735168
Ensembl:ENSGALT00000003489 ArrayExpress:F1P5E8 Uniprot:F1P5E8
Length = 515
Score = 258 (95.9 bits), Expect = 5.7e-19, P = 5.7e-19
Identities = 72/244 (29%), Positives = 120/244 (49%)
Query: 413 LIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFD 472
+IVTGS D++VR+WD + + H AV + FS L +V+ S D +I VW
Sbjct: 265 VIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFSNGL---MVTCSKDRSIAVW--- 318
Query: 473 GLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTF 532
D P ++ + V+ H +N V +D + + S DRT VW V T
Sbjct: 319 ----DMASPTDITLRRVLVGHRAAVN--VVDFDDKYIVSASGDRTIKVWSTSTCEFVRTL 372
Query: 533 RGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQ 592
GHKRGI +++ D++V++ S D TI++W I G+CL+ EGH V F + +
Sbjct: 373 NGHKRGIACLQYR--DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNK--R 428
Query: 593 IVSCGADGLVKLWTVRTGE---------CIATYDKHEDKIWALAVGKKTEMFATGGSDAL 643
IVS DG +K+W ++ C+ T +H +++ L + ++ ++ D +
Sbjct: 429 IVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQFDE-FQIISSSHDDTI 487
Query: 644 VNLW 647
+ +W
Sbjct: 488 L-IW 490
Score = 205 (77.2 bits), Expect = 4.1e-13, P = 4.1e-13
Identities = 56/201 (27%), Positives = 96/201 (47%)
Query: 29 SDGSFIACACGESINIVDLSNAS---IKSTIEGGSDTITALALSPDDKLLFSSGHSREIR 85
S+G + C+ SI + D+++ + ++ + G + + DDK + S+ R I+
Sbjct: 302 SNGLMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIK 359
Query: 86 VWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGA-DRKVLVWDVDGGFCTHYFKGHK 144
VW ST + +R+ GH G+AC L +G+ D + +WD++ G C +GH+
Sbjct: 360 VWSTSTCEFVRTLNGHKR---GIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHE 416
Query: 145 GVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKK---------CVATLDKHFSRVTSMA 195
+V I F D + SG+ D ++VWDL A C+ TL +H RV +
Sbjct: 417 ELVRCIRF----DNKRIVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQ 472
Query: 196 ITSDGSTLISAGRDKVVNLWD 216
D +IS+ D + +WD
Sbjct: 473 F--DEFQIISSSHDDTILIWD 491
Score = 184 (69.8 bits), Expect = 8.2e-11, P = 8.2e-11
Identities = 72/286 (25%), Positives = 125/286 (43%)
Query: 245 DSFLSSYNQQTIKK-KRRSLEIHFITVGERGIVRMWNADSACLYEQKSSDVTISFEMDDS 303
+ +S +IK + SLE + G G V D + SSD T+ + D
Sbjct: 224 EKIISGLRDNSIKIWDKTSLECLKVLTGHTGSVLCLQYDERVIVTG-SSDSTV--RVWDV 280
Query: 304 KRGFTAATVLPSNQGLLCVTADQQLLLYTT----VEVPE--KKMELILSKRLVGYNEEIL 357
G T++ N+ +L + L++ + + V + ++ L + LVG+ +
Sbjct: 281 NTGEVLNTLIHHNEAVLHLRFSNGLMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVN 340
Query: 358 DLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYV--LAGHSEIVLCLDTCALSSGKILIV 415
+ F +++Y+ A+ ++V+ S+ +C +V L GH + CL L+V
Sbjct: 341 VVDF---DDKYIVSASGDRTIKVW--STSTCEFVRTLNGHKRGIACLQY-----RDRLVV 390
Query: 416 TGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLS 475
+GS DN++RLWD E C+ V GH V + F K +VSG+ D IKVW
Sbjct: 391 SGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKR---IVSGAYDGKIKVWDLQAAL 447
Query: 476 DDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVW 521
D L + +V G+ + L ++ + + S D T +W
Sbjct: 448 DPRAPASTLCLRTLVEHSGR-VFRLQF--DEFQIISSSHDDTILIW 490
Score = 166 (63.5 bits), Expect = 7.6e-09, P = 7.6e-09
Identities = 53/216 (24%), Positives = 96/216 (44%)
Query: 7 KKSYGCEPVLQQFYGGGPLVVSSDGSFIACACGES-INIVDLSNASIKSTIEGGSDTITA 65
K S C VL + G L + D I +S + + D++ + +T+ ++ +
Sbjct: 240 KTSLECLKVLTG-HTGSVLCLQYDERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLH 298
Query: 66 LALSPDDKLLFSSGHSREIRVWDLST---LKCLRSWKGHDGPAIGMACHPSGGLLATAGA 122
L S + L+ + R I VWD+++ + R GH A+ + +++ +G
Sbjct: 299 LRFS--NGLMVTCSKDRSIAVWDMASPTDITLRRVLVGHRA-AVNVVDFDDKYIVSASG- 354
Query: 123 DRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVA 182
DR + VW GHK ++ + + D+ L+ SGS D T+R+WD+ C+
Sbjct: 355 DRTIKVWSTSTCEFVRTLNGHKRGIACLQYR---DR-LVVSGSSDNTIRLWDIECGACLR 410
Query: 183 TLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLR 218
L+ H V I D ++S D + +WDL+
Sbjct: 411 VLEGHEELVR--CIRFDNKRIVSGAYDGKIKVWDLQ 444
Score = 162 (62.1 bits), Expect = 2.1e-08, P = 2.1e-08
Identities = 50/194 (25%), Positives = 91/194 (46%)
Query: 457 LVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDR 516
++SG D++IK+W D S L+ V+ H + L + ++ ++ TGS D
Sbjct: 226 IISGLRDNSIKIW--DKTS--------LECLKVLTGHTGSV--LCLQYDERVIVTGSSDS 273
Query: 517 TACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSIS---DGSCLKT 573
T VW + + T H + + FS + +++T S D++I +W ++ D + +
Sbjct: 274 TVRVWDVNTGEVLNTLIHHNEAVLHLRFS--NGLMVTCSKDRSIAVWDMASPTDITLRRV 331
Query: 574 FEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTE 633
GH ++V F + IVS D +K+W+ T E + T + H+ I L +
Sbjct: 332 LVGHRAAVNVVDFDDK--YIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQY--RDR 387
Query: 634 MFATGGSDALVNLW 647
+ +G SD + LW
Sbjct: 388 LVVSGSSDNTIRLW 401
Score = 147 (56.8 bits), Expect = 9.1e-07, P = 9.1e-07
Identities = 38/150 (25%), Positives = 68/150 (45%)
Query: 68 LSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVL 127
L DD+ + S I++WD ++L+CL+ GH G + + ++ T +D V
Sbjct: 219 LQYDDEKIISGLRDNSIKIWDKTSLECLKVLTGHTGSVLCLQYDER--VIVTGSSDSTVR 276
Query: 128 VWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKH 187
VWDV+ G + H V + F L+ + S D ++ VWD+ + + TL +
Sbjct: 277 VWDVNTGEVLNTLIHHNEAVLHLRF----SNGLMVTCSKDRSIAVWDMASPTDI-TLRRV 331
Query: 188 F--SRVTSMAITSDGSTLISAGRDKVVNLW 215
R + D ++SA D+ + +W
Sbjct: 332 LVGHRAAVNVVDFDDKYIVSASGDRTIKVW 361
Score = 137 (53.3 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 34/150 (22%), Positives = 68/150 (45%)
Query: 505 NDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWS 564
+D + +G +D + +W L + GH + +++ ++V++T S D T+++W
Sbjct: 222 DDEKIISGLRDNSIKIWDKTSLECLKVLTGHTGSVLCLQYD--ERVIVTGSSDSTVRVWD 279
Query: 565 ISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIA---TYDKHED 621
++ G L T H +VL F + G +V+C D + +W + + I H
Sbjct: 280 VNTGEVLNTLIHHNEAVLHLRF-SNGL-MVTCSKDRSIAVWDMASPTDITLRRVLVGHRA 337
Query: 622 KIWALAVGKKTEMFATGGSDALVNLWHDST 651
+ + K + A+G D + +W ST
Sbjct: 338 AVNVVDFDDKYIVSASG--DRTIKVWSTST 365
Score = 131 (51.2 bits), Expect = 5.0e-05, P = 5.0e-05
Identities = 45/162 (27%), Positives = 65/162 (40%)
Query: 26 VVSSDGSFIACACGE-SINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREI 84
VV D +I A G+ +I + S T+ G I L D+L+ S I
Sbjct: 341 VVDFDDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYR--DRLVVSGSSDNTI 398
Query: 85 RVWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGA-DRKVLVWDVDGGF-------- 135
R+WD+ CLR +GH+ + C +GA D K+ VWD+
Sbjct: 399 RLWDIECGACLRVLEGHEEL---VRCIRFDNKRIVSGAYDGKIKVWDLQAALDPRAPAST 455
Query: 136 -CTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLL 176
C H G V + F D+ + S S D T+ +WD L
Sbjct: 456 LCLRTLVEHSGRVFRLQF----DEFQIISSSHDDTILIWDFL 493
>ZFIN|ZDB-GENE-040426-1954 [details] [associations]
symbol:katnb1 "katanin p80 (WD repeat containing)
subunit B 1" species:7955 "Danio rerio" [GO:0008017 "microtubule
binding" evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0005874 "microtubule"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0007049
"cell cycle" evidence=IEA] [GO:0000922 "spindle pole" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-1954 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874
GeneTree:ENSGT00700000104017 HOGENOM:HOG000008039 GO:GO:0008352
HAMAP:MF_03022 PANTHER:PTHR19845 CTD:10300 HOVERGEN:HBG052294
EMBL:BC047819 IPI:IPI00483795 RefSeq:NP_998183.1 UniGene:Dr.76809
ProteinModelPortal:Q7ZUV2 Ensembl:ENSDART00000014632 GeneID:406291
KEGG:dre:406291 InParanoid:Q7ZUV2 OMA:YWERNDI OrthoDB:EOG470TGV
NextBio:20817922 ArrayExpress:Q7ZUV2 Bgee:Q7ZUV2 Uniprot:Q7ZUV2
Length = 694
Score = 260 (96.6 bits), Expect = 7.2e-19, P = 7.2e-19
Identities = 59/195 (30%), Positives = 92/195 (47%)
Query: 29 SDGSFIACACGES--INIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRV 86
S G +A GE +NI +S + ++ G + + + + ++ + + S +R+
Sbjct: 31 SSGRLLATG-GEDCRVNIWAVSKPNCIMSLTGHTSAVGCIQFNSSEERVVAGSLSGSLRL 89
Query: 87 WDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGV 146
WDL K LR+ GH + HP G LA+ D + +WDV C +KGH
Sbjct: 90 WDLEAAKILRTLMGHKASISSLDFHPMGEYLASGSVDSNIKLWDVRRKGCVFRYKGHTQA 149
Query: 147 VSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISA 206
V + F PD L S SDD+TV++WDL+A K + H S V + + L S
Sbjct: 150 VRCLAFSPDG--KWLASASDDSTVKLWDLIAGKMITEFTSHTSAVNVVQFHPNEYLLASG 207
Query: 207 GRDKVVNLWDLRDYS 221
D+ V LWDL ++
Sbjct: 208 SADRTVKLWDLEKFN 222
Score = 241 (89.9 bits), Expect = 8.6e-17, P = 8.6e-17
Identities = 75/304 (24%), Positives = 138/304 (45%)
Query: 347 KRLVGYNEEILDLKFLGEEEQYLAVATNIE--QVQVYDLSSMSCSYVLAGHSEIVLCLDT 404
+ +V ++ + L LG+ L +AT E +V ++ +S +C L GH+ V C+
Sbjct: 14 QEIVAHSSNVSSL-VLGKSSGRL-LATGGEDCRVNIWAVSKPNCIMSLTGHTSAVGCIQ- 70
Query: 405 CALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDH 464
+S + +V GS S+RLWD E+ + GH ++ ++ F + +L SGS D
Sbjct: 71 --FNSSEERVVAGSLSGSLRLWDLEAAKILRTLMGHKASISSLDFHP-MGEYLASGSVDS 127
Query: 465 TIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLP 524
IK+W D + + K H + + LA +P+ + + S D T +W L
Sbjct: 128 NIKLW------DVRRKGCVFRYKG----HTQAVRCLAFSPDGKWLASASDDSTVKLWDLI 177
Query: 525 DLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRA 584
+ F H + V+F P + ++ + S D+T+K+W + + + + EG T V
Sbjct: 178 AGKMITEFTSHTSAVNVVQFHPNEYLLASGSADRTVKLWDLEKFNMIGSSEGETGVVRSV 237
Query: 585 SFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALV 644
F G+ + S G++ ++++ C K+ LA+ +M A S V
Sbjct: 238 LFNPDGSCLYS-GSENTLRVYGWEPDRCFDVVHVGWGKVSDLAISNN-QMIAVSYSHTNV 295
Query: 645 NLWH 648
+ W+
Sbjct: 296 S-WY 298
Score = 226 (84.6 bits), Expect = 3.7e-15, P = 3.7e-15
Identities = 59/190 (31%), Positives = 91/190 (47%)
Query: 28 SSDGSFIACACGESINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRVW 87
SS+ +A + S+ + DL A I T+ G +I++L P + L S I++W
Sbjct: 73 SSEERVVAGSLSGSLRLWDLEAAKILRTLMGHKASISSLDFHPMGEYLASGSVDSNIKLW 132
Query: 88 DLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVV 147
D+ C+ +KGH +A P G LA+A D V +WD+ G F H V
Sbjct: 133 DVRRKGCVFRYKGHTQAVRCLAFSPDGKWLASASDDSTVKLWDLIAGKMITEFTSHTSAV 192
Query: 148 SSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAG 207
+ + FHP+ + LL SGS D TV++WDL + + + V S+ DGS L S
Sbjct: 193 NVVQFHPN--EYLLASGSADRTVKLWDLEKFNMIGSSEGETGVVRSVLFNPDGSCLYSGS 250
Query: 208 RDKV-VNLWD 216
+ + V W+
Sbjct: 251 ENTLRVYGWE 260
Score = 164 (62.8 bits), Expect = 2.0e-08, P = 2.0e-08
Identities = 43/145 (29%), Positives = 65/145 (44%)
Query: 113 SGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRV 172
SG LLAT G D +V +W V C GH V I F+ ++ + +GS ++R+
Sbjct: 32 SGRLLATGGEDCRVNIWAVSKPNCIMSLTGHTSAVGCIQFNSSEER--VVAGSLSGSLRL 89
Query: 173 WDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYEMV 232
WDL A K + TL H + ++S+ G L S D + LWD+R C +
Sbjct: 90 WDLEAAKILRTLMGHKASISSLDFHPMGEYLASGSVDSNIKLWDVRRKGCVFRYKGHTQA 149
Query: 233 EAVCAIPPGSAFDSFLSSYNQQTIK 257
A P + S+ + T+K
Sbjct: 150 VRCLAFSPDGKW--LASASDDSTVK 172
>ASPGD|ASPL0000014385 [details] [associations]
symbol:cpcB species:162425 "Emericella nidulans"
[GO:0034198 "cellular response to amino acid starvation"
evidence=IMP] [GO:0001965 "G-protein alpha-subunit binding"
evidence=IGI;ISS] [GO:0070798 "positive regulation of
cleistothecium development" evidence=IMP] [GO:0005622
"intracellular" evidence=IDA] [GO:0035690 "cellular response to
drug" evidence=IEP] [GO:0097308 "cellular response to farnesol"
evidence=IEP] [GO:0043022 "ribosome binding" evidence=IEA]
[GO:0005080 "protein kinase C binding" evidence=IEA] [GO:0070791
"cleistothecium development" evidence=IMP] [GO:0032995 "regulation
of fungal-type cell wall biogenesis" evidence=IEA] [GO:0031139
"positive regulation of conjugation with cellular fusion"
evidence=IEA] [GO:0034613 "cellular protein localization"
evidence=IEA] [GO:0035556 "intracellular signal transduction"
evidence=IEA] [GO:0032956 "regulation of actin cytoskeleton
organization" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001302
EMBL:AACD01000067 HOGENOM:HOG000091643 KO:K14753 OMA:IRVWQVM
RefSeq:XP_661767.1 ProteinModelPortal:G5EB28 SMR:G5EB28
EnsemblFungi:CADANIAT00004509 GeneID:2873584 KEGG:ani:AN4163.2
Uniprot:G5EB28
Length = 316
Score = 236 (88.1 bits), Expect = 8.1e-19, P = 8.1e-19
Identities = 64/217 (29%), Positives = 107/217 (49%)
Query: 435 GVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHG 494
G GH G V ++A S + N L+SGS D T+ +W+ L+ D EQ +++ H
Sbjct: 9 GTLEGHNGWVTSLATSLENPNMLLSGSRDKTLIIWN---LTRD-EQAYGYPKRSL-EGHS 63
Query: 495 KDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITA 554
++ ++ + + + S D++ +W L + TF GH + SV FS ++ +++
Sbjct: 64 HIVSDCVISSDGAYALSASWDKSLRLWELSSGQTTRTFVGHTNDVLSVSFSADNRQIVSG 123
Query: 555 SGDKTIKIWSISDGSCLKTF--EGHTS--SVLRASFLTRGAQIVSCGADGLVKLWTVRTG 610
S D+TIK+W+ G C T +GHT S +R S + IVS G D LVK+W + +
Sbjct: 124 SRDRTIKLWNTL-GDCKYTITDKGHTEWVSCVRFSPNPQNPVIVSAGWDKLVKVWELASC 182
Query: 611 ECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLW 647
+ H I + + + A+GG D + LW
Sbjct: 183 RLQTDHIGHTGYINTVTISPDGSLCASGGKDGVTMLW 219
Score = 215 (80.7 bits), Expect = 3.5e-15, P = 3.5e-15
Identities = 58/246 (23%), Positives = 113/246 (45%)
Query: 53 KSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHP 112
K ++EG S ++ +S D S+ + +R+W+LS+ + R++ GH + ++
Sbjct: 56 KRSLEGHSHIVSDCVISSDGAYALSASWDKSLRLWELSSGQTTRTFVGHTNDVLSVSFSA 115
Query: 113 SGGLLATAGADRKVLVWDVDGGFCTHYF--KGHKGVVSSILFHPDTDKSLLFSGSDDATV 170
+ + DR + +W+ G C + KGH VS + F P+ ++ S D V
Sbjct: 116 DNRQIVSGSRDRTIKLWNTLGD-CKYTITDKGHTEWVSCVRFSPNPQNPVIVSAGWDKLV 174
Query: 171 RVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYE 230
+VW+L + + H + ++ I+ DGS S G+D V LWDL + ++ +
Sbjct: 175 KVWELASCRLQTDHIGHTGYINTVTISPDGSLCASGGKDGVTMLWDLNESKHLYSLHAGD 234
Query: 231 MVEAVCAIPPG----SAFDSFLSSYNQQTIKKKRRSLEIHFITVGERG-----IVRMWNA 281
+ A+ P +A S ++ ++ + K K L+ +I G++ + W+A
Sbjct: 235 EIHALVFSPNRYWLCAATSSSITIFDLEK-KSKVDELKPEYIEKGKKSREPECVSLAWSA 293
Query: 282 DSACLY 287
D L+
Sbjct: 294 DGQTLF 299
Score = 196 (74.1 bits), Expect = 8.0e-13, P = 8.0e-13
Identities = 68/246 (27%), Positives = 116/246 (47%)
Query: 392 LAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWD-SESRCCVGVGT----GHMGAVGA 446
L GH+ V L T +L + +L+ +GS+D ++ +W+ + G GH V
Sbjct: 11 LEGHNGWVTSLAT-SLENPNMLL-SGSRDKTLIIWNLTRDEQAYGYPKRSLEGHSHIVSD 68
Query: 447 VAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPND 506
S + +S S D ++++W LS + H D+ S++ + ++
Sbjct: 69 CVISSD-GAYALSASWDKSLRLWE---LSSG-------QTTRTFVGHTNDVLSVSFSADN 117
Query: 507 SLVCTGSQDRTACVWR-LPDLVSVVTFRGHKRGIWSVEFSPVDQ--VVITASGDKTIKIW 563
+ +GS+DRT +W L D +T +GH + V FSP Q V+++A DK +K+W
Sbjct: 118 RQIVSGSRDRTIKLWNTLGDCKYTITDKGHTEWVSCVRFSPNPQNPVIVSAGWDKLVKVW 177
Query: 564 SISDGSC-LKTFE-GHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHE- 620
++ SC L+T GHT + + G+ S G DG+ LW + + + Y H
Sbjct: 178 ELA--SCRLQTDHIGHTGYINTVTISPDGSLCASGGKDGVTMLWDLNESKHL--YSLHAG 233
Query: 621 DKIWAL 626
D+I AL
Sbjct: 234 DEIHAL 239
Score = 193 (73.0 bits), Expect = 1.8e-12, P = 1.8e-12
Identities = 54/181 (29%), Positives = 83/181 (45%)
Query: 478 AEQPMNLKAKAVVAAHGKDINSLAVA-PNDSLVCTGSQDRTACVWRLPDLVSVVTF---- 532
AEQ L + + H + SLA + N +++ +GS+D+T +W L +
Sbjct: 2 AEQ---LVLRGTLEGHNGWVTSLATSLENPNMLLSGSRDKTLIIWNLTRDEQAYGYPKRS 58
Query: 533 -RGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGA 591
GH + S ++AS DK++++W +S G +TF GHT+ VL SF
Sbjct: 59 LEGHSHIVSDCVISSDGAYALSASWDKSLRLWELSSGQTTRTFVGHTNDVLSVSFSADNR 118
Query: 592 QIVSCGADGLVKLWTVRTGECIATY-DKHEDKIWALAV----GKKTEMFATGGSDALVNL 646
QIVS D +KLW G+C T DK + W V + + + G D LV +
Sbjct: 119 QIVSGSRDRTIKLWNT-LGDCKYTITDKGHTE-WVSCVRFSPNPQNPVIVSAGWDKLVKV 176
Query: 647 W 647
W
Sbjct: 177 W 177
Score = 187 (70.9 bits), Expect = 6.7e-13, Sum P(2) = 6.7e-13
Identities = 52/183 (28%), Positives = 92/183 (50%)
Query: 52 IKSTIEGGSDTITALALSPDD-KLLFSSGHSREIRVWDLSTLKCL-----RSWKGHDGPA 105
++ T+EG + +T+LA S ++ +L S + + +W+L+ + RS +GH
Sbjct: 7 LRGTLEGHNGWVTSLATSLENPNMLLSGSRDKTLIIWNLTRDEQAYGYPKRSLEGHSHIV 66
Query: 106 IGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGS 165
G +A D+ + +W++ G T F GH V S+ F D + + SGS
Sbjct: 67 SDCVISSDGAYALSASWDKSLRLWELSSGQTTRTFVGHTNDVLSVSFSADNRQ--IVSGS 124
Query: 166 DDATVRVWDLLAKKCVATL-DK-HFSRVTSMAITSD--GSTLISAGRDKVVNLWDLRDYS 221
D T+++W+ L C T+ DK H V+ + + + ++SAG DK+V +W+L S
Sbjct: 125 RDRTIKLWNTLGD-CKYTITDKGHTEWVSCVRFSPNPQNPVIVSAGWDKLVKVWELA--S 181
Query: 222 CKL 224
C+L
Sbjct: 182 CRL 184
Score = 176 (67.0 bits), Expect = 1.7e-10, P = 1.7e-10
Identities = 49/200 (24%), Positives = 94/200 (47%)
Query: 26 VVSSDGSF-IACACGESINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREI 84
V+SSDG++ ++ + +S+ + +LS+ T G ++ + +++ S D++ + S R I
Sbjct: 70 VISSDGAYALSASWDKSLRLWELSSGQTTRTFVGHTNDVLSVSFSADNRQIVSGSRDRTI 129
Query: 85 RVWD-LSTLKCLRSWKGHDG--PAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFK 141
++W+ L K + KGH + + +P ++ +AG D+ V VW++
Sbjct: 130 KLWNTLGDCKYTITDKGHTEWVSCVRFSPNPQNPVIVSAGWDKLVKVWELASCRLQTDHI 189
Query: 142 GHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGS 201
GH G ++++ PD SL SG D +WDL K + +L H + S
Sbjct: 190 GHTGYINTVTISPDG--SLCASGGKDGVTMLWDLNESKHLYSL--HAGDEIHALVFSPNR 245
Query: 202 TLISAGRDKVVNLWDLRDYS 221
+ A + ++DL S
Sbjct: 246 YWLCAATSSSITIFDLEKKS 265
Score = 164 (62.8 bits), Expect = 4.0e-09, P = 4.0e-09
Identities = 61/262 (23%), Positives = 120/262 (45%)
Query: 310 ATVLPSNQGLLCVTADQQLLLYTTVEVPEKKMELILSKRLVGYNEEILDLKFLGEEEQYL 369
AT L + LL + D+ L+++ +++ + L G++ + D + + Y
Sbjct: 22 ATSLENPNMLLSGSRDKTLIIWNLTR--DEQAYGYPKRSLEGHSHIVSDC-VISSDGAYA 78
Query: 370 AVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSE 429
A+ + +++++LSS + GH+ VL + + S+ IV+GS+D +++LW++
Sbjct: 79 LSASWDKSLRLWELSSGQTTRTFVGHTNDVLSV---SFSADNRQIVSGSRDRTIKLWNTL 135
Query: 430 SRCCVGV-GTGHMGAVGAVAFSKKLQN-FLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAK 487
C + GH V V FS QN +VS D +KVW L+
Sbjct: 136 GDCKYTITDKGHTEWVSCVRFSPNPQNPVIVSAGWDKLVKVWELASC--------RLQTD 187
Query: 488 AVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPV 547
+ H IN++ ++P+ SL +G +D +W L + + + I ++ FSP
Sbjct: 188 HI--GHTGYINTVTISPDGSLCASGGKDGVTMLWDLNESKHLYSLHAGDE-IHALVFSP- 243
Query: 548 DQVVITASGDKTIKIWSISDGS 569
++ + A+ +I I+ + S
Sbjct: 244 NRYWLCAATSSSITIFDLEKKS 265
Score = 140 (54.3 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 41/181 (22%), Positives = 84/181 (46%)
Query: 47 LSNASIKSTIEGGSDTITALALSPDDK--LLFSSGHSREIRVWDLSTLKCLRSWKGHDGP 104
L + T +G ++ ++ + SP+ + ++ S+G + ++VW+L++ + GH G
Sbjct: 135 LGDCKYTITDKGHTEWVSCVRFSPNPQNPVIVSAGWDKLVKVWELASCRLQTDHIGHTGY 194
Query: 105 AIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKG-VVSSILFHPDTDKSLLFS 163
+ P G L A+ G D ++WD++ H + H G + +++F P+
Sbjct: 195 INTVTISPDGSLCASGGKDGVTMLWDLNES--KHLYSLHAGDEIHALVFSPNR---YWLC 249
Query: 164 GSDDATVRVWDLLAKKCVATLDKHF------SR---VTSMAITSDGSTLISAGRDKVVNL 214
+ +++ ++DL K V L + SR S+A ++DG TL + D +
Sbjct: 250 AATSSSITIFDLEKKSKVDELKPEYIEKGKKSREPECVSLAWSADGQTLFAGYTDNKIRA 309
Query: 215 W 215
W
Sbjct: 310 W 310
Score = 121 (47.7 bits), Expect = 0.00027, P = 0.00027
Identities = 30/124 (24%), Positives = 60/124 (48%)
Query: 531 TFRGHKRGIWSVEFSPVD-QVVITASGDKTIKIWSIS-D----GSCLKTFEGHTSSVLRA 584
T GH + S+ S + ++++ S DKT+ IW+++ D G ++ EGH+ V
Sbjct: 10 TLEGHNGWVTSLATSLENPNMLLSGSRDKTLIIWNLTRDEQAYGYPKRSLEGHSHIVSDC 69
Query: 585 SFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALV 644
+ GA +S D ++LW + +G+ T+ H + + +++ +G D +
Sbjct: 70 VISSDGAYALSASWDKSLRLWELSSGQTTRTFVGHTNDVLSVSFSADNRQIVSGSRDRTI 129
Query: 645 NLWH 648
LW+
Sbjct: 130 KLWN 133
Score = 51 (23.0 bits), Expect = 6.7e-13, Sum P(2) = 6.7e-13
Identities = 26/95 (27%), Positives = 38/95 (40%)
Query: 346 SKRLVGYN--EEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSC------SYVLAGH-S 396
SK L + +EI L F +L AT+ + ++DL S Y+ G S
Sbjct: 224 SKHLYSLHAGDEIHALVF-SPNRYWLCAATS-SSITIFDLEKKSKVDELKPEYIEKGKKS 281
Query: 397 EIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESR 431
C+ + G+ L G DN +R W SR
Sbjct: 282 REPECVSLAWSADGQTLFA-GYTDNKIRAWGVMSR 315
>RGD|1311332 [details] [associations]
symbol:Taf5 "TAF5 RNA polymerase II, TATA box binding protein
(TBP)-associated factor" species:10116 "Rattus norvegicus"
[GO:0003674 "molecular_function" evidence=ND] [GO:0003677 "DNA
binding" evidence=ISO] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISO] [GO:0004402
"histone acetyltransferase activity" evidence=IEA;ISO] [GO:0005575
"cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005669 "transcription factor TFIID complex"
evidence=IEA;ISO] [GO:0006352 "DNA-dependent transcription,
initiation" evidence=ISO] [GO:0006367 "transcription initiation
from RNA polymerase II promoter" evidence=IEA;ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0015629 "actin cytoskeleton"
evidence=IEA;ISO] [GO:0016573 "histone acetylation" evidence=ISO]
[GO:0033276 "transcription factor TFTC complex" evidence=IEA;ISO]
[GO:0043231 "intracellular membrane-bounded organelle"
evidence=ISO] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA;ISO] [GO:0046983 "protein dimerization
activity" evidence=IEA;ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320
SMART:SM00667 RGD:1311332 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0015629 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0003700 GO:GO:0044212 GO:GO:0006367
GO:GO:0004402 GO:GO:0005669 EMBL:CH473986 GO:GO:0033276
GeneTree:ENSGT00700000104377 KO:K03130 CTD:6877 OMA:ERQNNQI
OrthoDB:EOG469QW7 IPI:IPI00361559 RefSeq:NP_001099835.1
UniGene:Rn.144813 Ensembl:ENSRNOT00000027482 GeneID:294018
KEGG:rno:294018 UCSC:RGD:1311332 NextBio:637428 Uniprot:D3ZH66
Length = 798
Score = 252 (93.8 bits), Expect = 7.0e-18, P = 7.0e-18
Identities = 88/311 (28%), Positives = 143/311 (45%)
Query: 311 TVLPSNQGLLCV-TADQQLLLYTTVEVPEKKMELILSKRLVGYNEEILDLKFLGEEEQYL 369
T L + QGL V D L+ ++ + K+L ++ DL + +E +
Sbjct: 463 TFLNAYQGLTAVDVTDDSSLIAGGFADSTVRVWSVTPKKLRSV-KQASDLSLIDKESDDV 521
Query: 370 AVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSE 429
+E++ D + S +L GHS V + S + +++ S+D +VRLW +
Sbjct: 522 -----LERIM--DEKTASELKILYGHSGPVY---GASFSPDRNYLLSSSEDGTVRLWSLQ 571
Query: 430 SRCCVGVG-TGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKA 488
+ C+ VG GH V FS + VSG D ++W+ D QP+
Sbjct: 572 TFTCL-VGYKGHNYPVWDTQFSP-YGYYFVSGGHDRVARLWATDHY-----QPLR----- 619
Query: 489 VVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVD 548
+ A H D+N PN + V TGS DRT +W + + V F GHK I S+ FSP
Sbjct: 620 IFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNG 679
Query: 549 QVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGA-DGLVKLW-T 606
+ + T + D + +W I G + +GHT +V F +R +I++ G+ D V+LW
Sbjct: 680 RFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRF-SRDGEILASGSMDNTVRLWDA 738
Query: 607 VRTGECIATYD 617
++ E + T D
Sbjct: 739 IKAFEDLETDD 749
Score = 249 (92.7 bits), Expect = 9.4e-19, Sum P(2) = 9.4e-19
Identities = 61/235 (25%), Positives = 100/235 (42%)
Query: 413 LIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFD 472
LI S D R+ D ++ + + GH G V +FS +N+L+S S D T+++WS
Sbjct: 513 LIDKESDDVLERIMDEKTASELKILYGHSGPVYGASFSPD-RNYLLSSSEDGTVRLWSLQ 571
Query: 473 GLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTF 532
+ H + +P +G DR A +W + F
Sbjct: 572 TFT----------CLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIF 621
Query: 533 RGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQ 592
GH + F P V T S D+T+++W + +G+C++ F GH + +F G
Sbjct: 622 AGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRF 681
Query: 593 IVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLW 647
+ + DG V LW + G + H D + +L + E+ A+G D V LW
Sbjct: 682 LATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFSRDGEILASGSMDNTVRLW 736
Score = 240 (89.5 bits), Expect = 1.4e-16, P = 1.4e-16
Identities = 56/174 (32%), Positives = 80/174 (45%)
Query: 44 IVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDG 103
I+D AS + G S + + SPD L SS +R+W L T CL +KGH+
Sbjct: 525 IMDEKTASELKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNY 584
Query: 104 PAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFS 163
P P G + G DR +W D F GH V+ FHP+++ + +
Sbjct: 585 PVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSN--YVAT 642
Query: 164 GSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDL 217
GS D TVR+WD+L CV H + S+ + +G L + D V LWD+
Sbjct: 643 GSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDI 696
Score = 236 (88.1 bits), Expect = 3.9e-16, P = 3.9e-16
Identities = 62/206 (30%), Positives = 92/206 (44%)
Query: 16 LQQFYG-GGPLVVSS---DGSFIACACGE-SINIVDLSNASIKSTIEGGSDTITALALSP 70
L+ YG GP+ +S D +++ + + ++ + L + +G + + SP
Sbjct: 534 LKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSP 593
Query: 71 DDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWD 130
S GH R R+W + LR + GH HP+ +AT ADR V +WD
Sbjct: 594 YGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSADRTVRLWD 653
Query: 131 VDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSR 190
V G C F GHKG + S+ F P+ L +G+ D V +WD+ V L H
Sbjct: 654 VLNGNCVRIFTGHKGPIHSLTFSPNG--RFLATGATDGRVLLWDIGHGLMVGELKGHTDT 711
Query: 191 VTSMAITSDGSTLISAGRDKVVNLWD 216
V S+ + DG L S D V LWD
Sbjct: 712 VCSLRFSRDGEILASGSMDNTVRLWD 737
Score = 223 (83.6 bits), Expect = 6.6e-16, Sum P(2) = 6.6e-16
Identities = 53/201 (26%), Positives = 93/201 (46%)
Query: 451 KKLQNFLVSGSSDHTIKVWSFDGLSDDA-EQPMNLKAKA---VVAAHGKDINSLAVAPND 506
KKL++ V +SD ++ D SDD E+ M+ K + ++ H + + +P+
Sbjct: 500 KKLRS--VKQASDLSL----IDKESDDVLERIMDEKTASELKILYGHSGPVYGASFSPDR 553
Query: 507 SLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSIS 566
+ + + S+D T +W L +V ++GH +W +FSP ++ D+ ++W+
Sbjct: 554 NYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATD 613
Query: 567 DGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWAL 626
L+ F GH + V F + + AD V+LW V G C+ + H+ I +L
Sbjct: 614 HYQPLRIFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSL 673
Query: 627 AVGKKTEMFATGGSDALVNLW 647
ATG +D V LW
Sbjct: 674 TFSPNGRFLATGATDGRVLLW 694
Score = 196 (74.1 bits), Expect = 8.5e-12, P = 8.5e-12
Identities = 39/107 (36%), Positives = 57/107 (53%)
Query: 70 PDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVW 129
P+ + + R +R+WD+ C+R + GH GP + P+G LAT D +VL+W
Sbjct: 635 PNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLW 694
Query: 130 DVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLL 176
D+ G KGH V S+ F D + +L SGS D TVR+WD +
Sbjct: 695 DIGHGLMVGELKGHTDTVCSLRFSRDGE--ILASGSMDNTVRLWDAI 739
Score = 132 (51.5 bits), Expect = 7.2e-05, P = 7.2e-05
Identities = 49/208 (23%), Positives = 84/208 (40%)
Query: 16 LQQFYGGGPLVVSSDGSFIACACGES-INIVDLSNASIKSTIEGGSDTITALALSPDDKL 74
L + G + V+ D S IA +S + + ++ ++S ++ SD ++ + DD L
Sbjct: 465 LNAYQGLTAVDVTDDSSLIAGGFADSTVRVWSVTPKKLRS-VKQASD-LSLIDKESDDVL 522
Query: 75 LFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGG 134
E R+ D T L+ GH GP G + P L ++ D V +W +
Sbjct: 523 --------E-RIMDEKTASELKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTF 573
Query: 135 FCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSM 194
C +KGH V F P SG D R+W + + H + V
Sbjct: 574 TCLVGYKGHNYPVWDTQFSPYG--YYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCT 631
Query: 195 AITSDGSTLISAGRDKVVNLWDLRDYSC 222
+ + + + D+ V LWD+ + +C
Sbjct: 632 RFHPNSNYVATGSADRTVRLWDVLNGNC 659
Score = 60 (26.2 bits), Expect = 9.4e-19, Sum P(2) = 9.4e-19
Identities = 20/67 (29%), Positives = 31/67 (46%)
Query: 155 DTDKSLLFSGSDDATVRVW---DLLAKKCVATLDKHFSRVTSMAITSDGSTLISAG-RDK 210
D+DK + T RV D L C T + +T++ +T D S+LI+ G D
Sbjct: 432 DSDKLDKIMNMKETTKRVRLGPDCLPSICFYTFLNAYQGLTAVDVTDD-SSLIAGGFADS 490
Query: 211 VVNLWDL 217
V +W +
Sbjct: 491 TVRVWSV 497
>UNIPROTKB|E1BEN8 [details] [associations]
symbol:TAF5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0033276 "transcription factor TFTC complex"
evidence=IEA] [GO:0015629 "actin cytoskeleton" evidence=IEA]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=IEA] [GO:0005669 "transcription factor TFIID
complex" evidence=IEA] [GO:0004402 "histone acetyltransferase
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0015629 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003700 GO:GO:0044212 GO:GO:0006367 GO:GO:0004402
GO:GO:0005669 GO:GO:0033276 GeneTree:ENSGT00700000104377 KO:K03130
CTD:6877 OMA:ERQNNQI EMBL:DAAA02059036 IPI:IPI00698152
RefSeq:NP_001178407.1 UniGene:Bt.59287 ProteinModelPortal:E1BEN8
Ensembl:ENSBTAT00000012808 GeneID:516001 KEGG:bta:516001
NextBio:20872090 Uniprot:E1BEN8
Length = 800
Score = 255 (94.8 bits), Expect = 3.3e-18, P = 3.3e-18
Identities = 89/311 (28%), Positives = 143/311 (45%)
Query: 311 TVLPSNQGLLCV-TADQQLLLYTTVEVPEKKMELILSKRLVGYNEEILDLKFLGEEEQYL 369
T L + QGL V D L+ ++ + K+L ++ DL + +E +
Sbjct: 465 TFLNAYQGLTAVDVTDDSSLIAGGFADSTVRVWSVTPKKLRSV-KQAADLSLIDKESDDV 523
Query: 370 AVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSE 429
+E++ D + S +L GHS V + S + +++ S+D +VRLW +
Sbjct: 524 -----LERIM--DEKTASELKILYGHSGPVY---GASFSPDRNYLLSSSEDGTVRLWSLQ 573
Query: 430 SRCCVGVG-TGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKA 488
+ C+ VG GH V FS + VSG D ++W+ D QP+
Sbjct: 574 TFTCL-VGYKGHNYPVWDTQFSP-YGYYFVSGGHDRVARLWATDHY-----QPLR----- 621
Query: 489 VVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVD 548
+ A H D+N PN + V TGS DRT +W + + V F GHK I S+ FSP
Sbjct: 622 IFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNG 681
Query: 549 QVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGA-DGLVKLW-T 606
+ + T + D + +W I G + +GHT +V F +R +I++ G+ D V+LW
Sbjct: 682 RFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRF-SRDGEILASGSMDNTVRLWDA 740
Query: 607 VRTGECIATYD 617
V+ E + T D
Sbjct: 741 VKAFEDVETDD 751
Score = 249 (92.7 bits), Expect = 9.5e-19, Sum P(2) = 9.5e-19
Identities = 61/235 (25%), Positives = 100/235 (42%)
Query: 413 LIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFD 472
LI S D R+ D ++ + + GH G V +FS +N+L+S S D T+++WS
Sbjct: 515 LIDKESDDVLERIMDEKTASELKILYGHSGPVYGASFSPD-RNYLLSSSEDGTVRLWSLQ 573
Query: 473 GLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTF 532
+ H + +P +G DR A +W + F
Sbjct: 574 TFT----------CLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIF 623
Query: 533 RGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQ 592
GH + F P V T S D+T+++W + +G+C++ F GH + +F G
Sbjct: 624 AGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRF 683
Query: 593 IVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLW 647
+ + DG V LW + G + H D + +L + E+ A+G D V LW
Sbjct: 684 LATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFSRDGEILASGSMDNTVRLW 738
Score = 240 (89.5 bits), Expect = 1.4e-16, P = 1.4e-16
Identities = 56/174 (32%), Positives = 80/174 (45%)
Query: 44 IVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDG 103
I+D AS + G S + + SPD L SS +R+W L T CL +KGH+
Sbjct: 527 IMDEKTASELKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNY 586
Query: 104 PAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFS 163
P P G + G DR +W D F GH V+ FHP+++ + +
Sbjct: 587 PVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSN--YVAT 644
Query: 164 GSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDL 217
GS D TVR+WD+L CV H + S+ + +G L + D V LWD+
Sbjct: 645 GSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDI 698
Score = 236 (88.1 bits), Expect = 3.9e-16, P = 3.9e-16
Identities = 62/206 (30%), Positives = 92/206 (44%)
Query: 16 LQQFYG-GGPLVVSS---DGSFIACACGE-SINIVDLSNASIKSTIEGGSDTITALALSP 70
L+ YG GP+ +S D +++ + + ++ + L + +G + + SP
Sbjct: 536 LKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSP 595
Query: 71 DDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWD 130
S GH R R+W + LR + GH HP+ +AT ADR V +WD
Sbjct: 596 YGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSADRTVRLWD 655
Query: 131 VDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSR 190
V G C F GHKG + S+ F P+ L +G+ D V +WD+ V L H
Sbjct: 656 VLNGNCVRIFTGHKGPIHSLTFSPNG--RFLATGATDGRVLLWDIGHGLMVGELKGHTDT 713
Query: 191 VTSMAITSDGSTLISAGRDKVVNLWD 216
V S+ + DG L S D V LWD
Sbjct: 714 VCSLRFSRDGEILASGSMDNTVRLWD 739
Score = 149 (57.5 bits), Expect = 6.8e-08, Sum P(2) = 6.8e-08
Identities = 38/153 (24%), Positives = 65/153 (42%)
Query: 495 KDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITA 554
K + S+ A + SL+ S D + + GH ++ FSP ++++
Sbjct: 502 KKLRSVKQAADLSLIDKESDDVLERIMDEKTASELKILYGHSGPVYGASFSPDRNYLLSS 561
Query: 555 SGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIA 614
S D T+++WS+ +CL ++GH V F G VS G D + +LW + +
Sbjct: 562 SEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLR 621
Query: 615 TYDKHEDKIWALAVGKKTEMFATGGSDALVNLW 647
+ H + + ATG +D V LW
Sbjct: 622 IFAGHLADVNCTRFHPNSNYVATGSADRTVRLW 654
Score = 129 (50.5 bits), Expect = 0.00015, P = 0.00015
Identities = 48/208 (23%), Positives = 84/208 (40%)
Query: 16 LQQFYGGGPLVVSSDGSFIACACGES-INIVDLSNASIKSTIEGGSDTITALALSPDDKL 74
L + G + V+ D S IA +S + + ++ ++S ++ +D ++ + DD L
Sbjct: 467 LNAYQGLTAVDVTDDSSLIAGGFADSTVRVWSVTPKKLRS-VKQAAD-LSLIDKESDDVL 524
Query: 75 LFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGG 134
E R+ D T L+ GH GP G + P L ++ D V +W +
Sbjct: 525 --------E-RIMDEKTASELKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTF 575
Query: 135 FCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSM 194
C +KGH V F P SG D R+W + + H + V
Sbjct: 576 TCLVGYKGHNYPVWDTQFSPYG--YYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCT 633
Query: 195 AITSDGSTLISAGRDKVVNLWDLRDYSC 222
+ + + + D+ V LWD+ + +C
Sbjct: 634 RFHPNSNYVATGSADRTVRLWDVLNGNC 661
Score = 60 (26.2 bits), Expect = 9.5e-19, Sum P(2) = 9.5e-19
Identities = 20/67 (29%), Positives = 31/67 (46%)
Query: 155 DTDKSLLFSGSDDATVRVW---DLLAKKCVATLDKHFSRVTSMAITSDGSTLISAG-RDK 210
D+DK + T RV D L C T + +T++ +T D S+LI+ G D
Sbjct: 434 DSDKLDKIMNMKETTKRVRLGPDCLPSICFYTFLNAYQGLTAVDVTDD-SSLIAGGFADS 492
Query: 211 VVNLWDL 217
V +W +
Sbjct: 493 TVRVWSV 499
>UNIPROTKB|Q15542 [details] [associations]
symbol:TAF5 "Transcription initiation factor TFIID subunit
5" species:9606 "Homo sapiens" [GO:0019048 "virus-host interaction"
evidence=IEA] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=IDA;TAS] [GO:0005669
"transcription factor TFIID complex" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0004402 "histone acetyltransferase activity"
evidence=IDA] [GO:0046983 "protein dimerization activity"
evidence=IDA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IDA;IMP] [GO:0005634
"nucleus" evidence=IDA] [GO:0033276 "transcription factor TFTC
complex" evidence=IDA] [GO:0006352 "DNA-dependent transcription,
initiation" evidence=IDA] [GO:0016568 "chromatin modification"
evidence=IC] [GO:0005654 "nucleoplasm" evidence=TAS] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=TAS]
[GO:0006368 "transcription elongation from RNA polymerase II
promoter" evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0016032 "viral reproduction" evidence=TAS] [GO:0015629 "actin
cytoskeleton" evidence=IDA] [GO:0043231 "intracellular
membrane-bounded organelle" evidence=IDA] [GO:0016573 "histone
acetylation" evidence=IDA] Reactome:REACT_71 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
Reactome:REACT_116125 GO:GO:0019048 GO:GO:0016032
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0015629 EMBL:CH471066 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016573 GO:GO:0003700
GO:GO:0046983 GO:GO:0044212 GO:GO:0006368 EMBL:AL591408
GO:GO:0006367 Reactome:REACT_1788 GO:GO:0005669 GO:GO:0033276
HOVERGEN:HBG050226 KO:K03130 CTD:6877 OMA:ERQNNQI EMBL:X95525
EMBL:U75309 EMBL:U80191 EMBL:AK223615 EMBL:AK291229 EMBL:BC052268
EMBL:BC136340 EMBL:BC136348 IPI:IPI00298925 IPI:IPI00298926
RefSeq:NP_008882.2 UniGene:Hs.96103 PDB:2NXP PDBsum:2NXP
ProteinModelPortal:Q15542 SMR:Q15542 DIP:DIP-28150N IntAct:Q15542
STRING:Q15542 PhosphoSite:Q15542 DMDM:78103206 PaxDb:Q15542
PRIDE:Q15542 Ensembl:ENST00000351396 Ensembl:ENST00000369839
GeneID:6877 KEGG:hsa:6877 UCSC:uc001kwv.3 UCSC:uc010qqq.2
GeneCards:GC10P105117 HGNC:HGNC:11539 HPA:HPA006195 HPA:HPA006474
MIM:601787 neXtProt:NX_Q15542 PharmGKB:PA36314 InParanoid:Q15542
OrthoDB:EOG469QW7 PhylomeDB:Q15542 EvolutionaryTrace:Q15542
GenomeRNAi:6877 NextBio:26855 Bgee:Q15542 CleanEx:HS_TAF5
Genevestigator:Q15542 GermOnline:ENSG00000148835 Uniprot:Q15542
Length = 800
Score = 252 (93.8 bits), Expect = 7.0e-18, P = 7.0e-18
Identities = 88/311 (28%), Positives = 143/311 (45%)
Query: 311 TVLPSNQGLLCV-TADQQLLLYTTVEVPEKKMELILSKRLVGYNEEILDLKFLGEEEQYL 369
T L + QGL V D L+ ++ + K+L ++ DL + +E +
Sbjct: 465 TFLNAYQGLTAVDVTDDSSLIAGGFADSTVRVWSVTPKKLRSV-KQASDLSLIDKESDDV 523
Query: 370 AVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSE 429
+E++ D + S +L GHS V + S + +++ S+D +VRLW +
Sbjct: 524 -----LERIM--DEKTASELKILYGHSGPVY---GASFSPDRNYLLSSSEDGTVRLWSLQ 573
Query: 430 SRCCVGVG-TGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKA 488
+ C+ VG GH V FS + VSG D ++W+ D QP+
Sbjct: 574 TFTCL-VGYKGHNYPVWDTQFSP-YGYYFVSGGHDRVARLWATDHY-----QPLR----- 621
Query: 489 VVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVD 548
+ A H D+N PN + V TGS DRT +W + + V F GHK I S+ FSP
Sbjct: 622 IFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNG 681
Query: 549 QVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGA-DGLVKLW-T 606
+ + T + D + +W I G + +GHT +V F +R +I++ G+ D V+LW
Sbjct: 682 RFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRF-SRDGEILASGSMDNTVRLWDA 740
Query: 607 VRTGECIATYD 617
++ E + T D
Sbjct: 741 IKAFEDLETDD 751
Score = 249 (92.7 bits), Expect = 9.5e-19, Sum P(2) = 9.5e-19
Identities = 61/235 (25%), Positives = 100/235 (42%)
Query: 413 LIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFD 472
LI S D R+ D ++ + + GH G V +FS +N+L+S S D T+++WS
Sbjct: 515 LIDKESDDVLERIMDEKTASELKILYGHSGPVYGASFSPD-RNYLLSSSEDGTVRLWSLQ 573
Query: 473 GLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTF 532
+ H + +P +G DR A +W + F
Sbjct: 574 TFT----------CLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIF 623
Query: 533 RGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQ 592
GH + F P V T S D+T+++W + +G+C++ F GH + +F G
Sbjct: 624 AGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRF 683
Query: 593 IVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLW 647
+ + DG V LW + G + H D + +L + E+ A+G D V LW
Sbjct: 684 LATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFSRDGEILASGSMDNTVRLW 738
Score = 240 (89.5 bits), Expect = 1.4e-16, P = 1.4e-16
Identities = 56/174 (32%), Positives = 80/174 (45%)
Query: 44 IVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDG 103
I+D AS + G S + + SPD L SS +R+W L T CL +KGH+
Sbjct: 527 IMDEKTASELKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNY 586
Query: 104 PAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFS 163
P P G + G DR +W D F GH V+ FHP+++ + +
Sbjct: 587 PVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSN--YVAT 644
Query: 164 GSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDL 217
GS D TVR+WD+L CV H + S+ + +G L + D V LWD+
Sbjct: 645 GSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDI 698
Score = 236 (88.1 bits), Expect = 3.9e-16, P = 3.9e-16
Identities = 62/206 (30%), Positives = 92/206 (44%)
Query: 16 LQQFYG-GGPLVVSS---DGSFIACACGE-SINIVDLSNASIKSTIEGGSDTITALALSP 70
L+ YG GP+ +S D +++ + + ++ + L + +G + + SP
Sbjct: 536 LKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSP 595
Query: 71 DDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWD 130
S GH R R+W + LR + GH HP+ +AT ADR V +WD
Sbjct: 596 YGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSADRTVRLWD 655
Query: 131 VDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSR 190
V G C F GHKG + S+ F P+ L +G+ D V +WD+ V L H
Sbjct: 656 VLNGNCVRIFTGHKGPIHSLTFSPNG--RFLATGATDGRVLLWDIGHGLMVGELKGHTDT 713
Query: 191 VTSMAITSDGSTLISAGRDKVVNLWD 216
V S+ + DG L S D V LWD
Sbjct: 714 VCSLRFSRDGEILASGSMDNTVRLWD 739
Score = 223 (83.6 bits), Expect = 6.7e-16, Sum P(2) = 6.7e-16
Identities = 53/201 (26%), Positives = 93/201 (46%)
Query: 451 KKLQNFLVSGSSDHTIKVWSFDGLSDDA-EQPMNLKAKA---VVAAHGKDINSLAVAPND 506
KKL++ V +SD ++ D SDD E+ M+ K + ++ H + + +P+
Sbjct: 502 KKLRS--VKQASDLSL----IDKESDDVLERIMDEKTASELKILYGHSGPVYGASFSPDR 555
Query: 507 SLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSIS 566
+ + + S+D T +W L +V ++GH +W +FSP ++ D+ ++W+
Sbjct: 556 NYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATD 615
Query: 567 DGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWAL 626
L+ F GH + V F + + AD V+LW V G C+ + H+ I +L
Sbjct: 616 HYQPLRIFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSL 675
Query: 627 AVGKKTEMFATGGSDALVNLW 647
ATG +D V LW
Sbjct: 676 TFSPNGRFLATGATDGRVLLW 696
Score = 196 (74.1 bits), Expect = 8.6e-12, P = 8.6e-12
Identities = 39/107 (36%), Positives = 57/107 (53%)
Query: 70 PDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVW 129
P+ + + R +R+WD+ C+R + GH GP + P+G LAT D +VL+W
Sbjct: 637 PNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLW 696
Query: 130 DVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLL 176
D+ G KGH V S+ F D + +L SGS D TVR+WD +
Sbjct: 697 DIGHGLMVGELKGHTDTVCSLRFSRDGE--ILASGSMDNTVRLWDAI 741
Score = 132 (51.5 bits), Expect = 7.2e-05, P = 7.2e-05
Identities = 49/208 (23%), Positives = 84/208 (40%)
Query: 16 LQQFYGGGPLVVSSDGSFIACACGES-INIVDLSNASIKSTIEGGSDTITALALSPDDKL 74
L + G + V+ D S IA +S + + ++ ++S ++ SD ++ + DD L
Sbjct: 467 LNAYQGLTAVDVTDDSSLIAGGFADSTVRVWSVTPKKLRS-VKQASD-LSLIDKESDDVL 524
Query: 75 LFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGG 134
E R+ D T L+ GH GP G + P L ++ D V +W +
Sbjct: 525 --------E-RIMDEKTASELKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTF 575
Query: 135 FCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSM 194
C +KGH V F P SG D R+W + + H + V
Sbjct: 576 TCLVGYKGHNYPVWDTQFSPYG--YYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCT 633
Query: 195 AITSDGSTLISAGRDKVVNLWDLRDYSC 222
+ + + + D+ V LWD+ + +C
Sbjct: 634 RFHPNSNYVATGSADRTVRLWDVLNGNC 661
Score = 60 (26.2 bits), Expect = 9.5e-19, Sum P(2) = 9.5e-19
Identities = 20/67 (29%), Positives = 31/67 (46%)
Query: 155 DTDKSLLFSGSDDATVRVW---DLLAKKCVATLDKHFSRVTSMAITSDGSTLISAG-RDK 210
D+DK + T RV D L C T + +T++ +T D S+LI+ G D
Sbjct: 434 DSDKLDKIMNMKETTKRVRLGPDCLPSICFYTFLNAYQGLTAVDVTDD-SSLIAGGFADS 492
Query: 211 VVNLWDL 217
V +W +
Sbjct: 493 TVRVWSV 499
>UNIPROTKB|E2RE41 [details] [associations]
symbol:TAF5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0033276 "transcription factor TFTC
complex" evidence=IEA] [GO:0015629 "actin cytoskeleton"
evidence=IEA] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=IEA] [GO:0005669 "transcription
factor TFIID complex" evidence=IEA] [GO:0004402 "histone
acetyltransferase activity" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0015629
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003700 GO:GO:0044212
GO:GO:0006367 GO:GO:0004402 GO:GO:0005669 GO:GO:0033276
GeneTree:ENSGT00700000104377 KO:K03130 CTD:6877 OMA:ERQNNQI
EMBL:AAEX03015497 RefSeq:XP_003433663.1 Ensembl:ENSCAFT00000016513
GeneID:100688981 KEGG:cfa:100688981 Uniprot:E2RE41
Length = 801
Score = 254 (94.5 bits), Expect = 4.2e-18, P = 4.2e-18
Identities = 89/311 (28%), Positives = 143/311 (45%)
Query: 311 TVLPSNQGLLCV-TADQQLLLYTTVEVPEKKMELILSKRLVGYNEEILDLKFLGEEEQYL 369
T L + QGL V D L+ ++ + K+L ++ DL + +E +
Sbjct: 466 TFLNAYQGLTAVDVTDDSSLIAGGFADSTVRVWSVTPKKLRSV-KQAADLSLIDKESDDV 524
Query: 370 AVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSE 429
+E++ D + S +L GHS V + S + +++ S+D +VRLW +
Sbjct: 525 -----LERIM--DEKTASELKILYGHSGPVY---GASFSPDRNYLLSSSEDGTVRLWSLQ 574
Query: 430 SRCCVGVG-TGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKA 488
+ C+ VG GH V FS + VSG D ++W+ D QP+
Sbjct: 575 TFTCL-VGYKGHNYPVWDTQFSP-YGYYFVSGGHDRVARLWATDHY-----QPLR----- 622
Query: 489 VVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVD 548
+ A H D+N PN + V TGS DRT +W + + V F GHK I S+ FSP
Sbjct: 623 IFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNG 682
Query: 549 QVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGA-DGLVKLW-T 606
+ + T + D + +W I G + +GHT +V F +R +I++ G+ D V+LW
Sbjct: 683 RFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRF-SRDGEILASGSMDNTVRLWDA 741
Query: 607 VRTGECIATYD 617
V+ E + T D
Sbjct: 742 VKAFEDLETDD 752
Score = 249 (92.7 bits), Expect = 9.5e-19, Sum P(2) = 9.5e-19
Identities = 61/235 (25%), Positives = 100/235 (42%)
Query: 413 LIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFD 472
LI S D R+ D ++ + + GH G V +FS +N+L+S S D T+++WS
Sbjct: 516 LIDKESDDVLERIMDEKTASELKILYGHSGPVYGASFSPD-RNYLLSSSEDGTVRLWSLQ 574
Query: 473 GLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTF 532
+ H + +P +G DR A +W + F
Sbjct: 575 TFT----------CLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIF 624
Query: 533 RGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQ 592
GH + F P V T S D+T+++W + +G+C++ F GH + +F G
Sbjct: 625 AGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRF 684
Query: 593 IVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLW 647
+ + DG V LW + G + H D + +L + E+ A+G D V LW
Sbjct: 685 LATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFSRDGEILASGSMDNTVRLW 739
Score = 240 (89.5 bits), Expect = 1.4e-16, P = 1.4e-16
Identities = 56/174 (32%), Positives = 80/174 (45%)
Query: 44 IVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDG 103
I+D AS + G S + + SPD L SS +R+W L T CL +KGH+
Sbjct: 528 IMDEKTASELKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNY 587
Query: 104 PAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFS 163
P P G + G DR +W D F GH V+ FHP+++ + +
Sbjct: 588 PVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSN--YVAT 645
Query: 164 GSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDL 217
GS D TVR+WD+L CV H + S+ + +G L + D V LWD+
Sbjct: 646 GSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDI 699
Score = 236 (88.1 bits), Expect = 3.9e-16, P = 3.9e-16
Identities = 62/206 (30%), Positives = 92/206 (44%)
Query: 16 LQQFYG-GGPLVVSS---DGSFIACACGE-SINIVDLSNASIKSTIEGGSDTITALALSP 70
L+ YG GP+ +S D +++ + + ++ + L + +G + + SP
Sbjct: 537 LKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSP 596
Query: 71 DDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWD 130
S GH R R+W + LR + GH HP+ +AT ADR V +WD
Sbjct: 597 YGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSADRTVRLWD 656
Query: 131 VDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSR 190
V G C F GHKG + S+ F P+ L +G+ D V +WD+ V L H
Sbjct: 657 VLNGNCVRIFTGHKGPIHSLTFSPNG--RFLATGATDGRVLLWDIGHGLMVGELKGHTDT 714
Query: 191 VTSMAITSDGSTLISAGRDKVVNLWD 216
V S+ + DG L S D V LWD
Sbjct: 715 VCSLRFSRDGEILASGSMDNTVRLWD 740
Score = 149 (57.5 bits), Expect = 6.8e-08, Sum P(2) = 6.8e-08
Identities = 38/153 (24%), Positives = 65/153 (42%)
Query: 495 KDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITA 554
K + S+ A + SL+ S D + + GH ++ FSP ++++
Sbjct: 503 KKLRSVKQAADLSLIDKESDDVLERIMDEKTASELKILYGHSGPVYGASFSPDRNYLLSS 562
Query: 555 SGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIA 614
S D T+++WS+ +CL ++GH V F G VS G D + +LW + +
Sbjct: 563 SEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLR 622
Query: 615 TYDKHEDKIWALAVGKKTEMFATGGSDALVNLW 647
+ H + + ATG +D V LW
Sbjct: 623 IFAGHLADVNCTRFHPNSNYVATGSADRTVRLW 655
Score = 129 (50.5 bits), Expect = 0.00015, P = 0.00015
Identities = 48/208 (23%), Positives = 84/208 (40%)
Query: 16 LQQFYGGGPLVVSSDGSFIACACGES-INIVDLSNASIKSTIEGGSDTITALALSPDDKL 74
L + G + V+ D S IA +S + + ++ ++S ++ +D ++ + DD L
Sbjct: 468 LNAYQGLTAVDVTDDSSLIAGGFADSTVRVWSVTPKKLRS-VKQAAD-LSLIDKESDDVL 525
Query: 75 LFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGG 134
E R+ D T L+ GH GP G + P L ++ D V +W +
Sbjct: 526 --------E-RIMDEKTASELKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTF 576
Query: 135 FCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSM 194
C +KGH V F P SG D R+W + + H + V
Sbjct: 577 TCLVGYKGHNYPVWDTQFSPYG--YYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCT 634
Query: 195 AITSDGSTLISAGRDKVVNLWDLRDYSC 222
+ + + + D+ V LWD+ + +C
Sbjct: 635 RFHPNSNYVATGSADRTVRLWDVLNGNC 662
Score = 60 (26.2 bits), Expect = 9.5e-19, Sum P(2) = 9.5e-19
Identities = 20/67 (29%), Positives = 31/67 (46%)
Query: 155 DTDKSLLFSGSDDATVRVW---DLLAKKCVATLDKHFSRVTSMAITSDGSTLISAG-RDK 210
D+DK + T RV D L C T + +T++ +T D S+LI+ G D
Sbjct: 435 DSDKLDKIMNMKETTKRVRLGPDCLPSICFYTFLNAYQGLTAVDVTDD-SSLIAGGFADS 493
Query: 211 VVNLWDL 217
V +W +
Sbjct: 494 TVRVWSV 500
>UNIPROTKB|F1MUW4 [details] [associations]
symbol:APAF1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0051402 "neuron apoptotic process" evidence=IEA]
[GO:0042802 "identical protein binding" evidence=IEA] [GO:0030900
"forebrain development" evidence=IEA] [GO:0016505 "apoptotic
protease activator activity" evidence=IEA] [GO:0008635 "activation
of cysteine-type endopeptidase activity involved in apoptotic
process by cytochrome c" evidence=IEA] [GO:0006309 "apoptotic DNA
fragmentation" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0001843 "neural tube closure" evidence=IEA]
[GO:0043531 "ADP binding" evidence=IEA] [GO:0006952 "defense
response" evidence=IEA] InterPro:IPR017986 InterPro:IPR000767
InterPro:IPR001315 InterPro:IPR001680 InterPro:IPR002182
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00619 Pfam:PF00931
PRINTS:PR00364 PROSITE:PS50082 PROSITE:PS50209 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0005794 GO:GO:0006952
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030900
GO:GO:0051402 GO:GO:0043531 GO:GO:0001843 GO:GO:0006309
GO:GO:0008635 Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986
GO:GO:0043293 GO:GO:0016505 OMA:KVCKNSA InterPro:IPR017251
PIRSF:PIRSF037646 GeneTree:ENSGT00700000104017 EMBL:DAAA02013647
EMBL:DAAA02013645 EMBL:DAAA02013646 IPI:IPI00689090
Ensembl:ENSBTAT00000028867 Uniprot:F1MUW4
Length = 1251
Score = 273 (101.2 bits), Expect = 1.1e-18, Sum P(2) = 1.1e-18
Identities = 151/623 (24%), Positives = 263/623 (42%)
Query: 28 SSDGSFIA-CACGESINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRV 86
S DG IA C +++ + I+ D + A S DDK + + +++++
Sbjct: 626 SEDGQRIASCGADKTLQVFKAETGEKLLEIKAHEDEVLCCAFSADDKFIATCSVDKKVKI 685
Query: 87 WDLSTLKCLRSWKGHDGPAIGMACHPSGG----LLATAGADRKVLVWDVDGGFCTHYFKG 142
W+ T + +R + H CH + LLAT D + +WD++ C + G
Sbjct: 686 WNSMTGELVRIYDEHSEQV--NCCHFTNNSNHLLLATGSNDYFLKLWDLNQEECRNTMFG 743
Query: 143 HKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLD-KHF---SR-------- 190
H VS F PD D+ +L S S D T+++WD+ + +++ K F S
Sbjct: 744 HTNSVSHCRFSPD-DQ-VLASCSADGTLKLWDVKSANERKSINVKQFFLNSEEPQEDLEV 801
Query: 191 -VTSMAITSDGSTLISAGRDKVVNLWDLRDYS--CKLTVPTYEMVEAVCAIPPGSAFDSF 247
V + ++DG+ ++ A ++KV L+D+ ++ + + V+ C P +
Sbjct: 802 IVKCCSWSADGAKIMVAAKNKVF-LFDIHSSGLLAEMHMGHHSAVQ-YCDFSPHNHLAVV 859
Query: 248 -LSSYNQQTIKKKRRSLEIHFITVGERGIVR--MWNADSACLYEQKSSDVTISFEMDDSK 304
LS Y + + L++ G V M++ D + + S D TI + K
Sbjct: 860 ALSQYCVE-LWSMDSGLKVADCR-GHLSWVHCVMFSPDGSS-FLTSSDDQTIRL-WETKK 915
Query: 305 RGFTAATVLPSNQGLLCVTADQQLLLYTTVEVPEKKMELILSKR-LVGY-NEEILDLKFL 362
+ATVL Q + V + ++ + + ++++LI + Y E + L
Sbjct: 916 VCKNSATVL--KQEIDVVFQENEVTVLAVDNI--RRLQLINGNTGQIDYLTEAQVSCCCL 971
Query: 363 GEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNS 422
QYLA +Q+ +L + GH V + A GK LI + S D++
Sbjct: 972 SPHLQYLAFGGEDGAIQILELLNNRIFQSRNGHKTTVRHIQFTA--DGKTLI-SSSDDSA 1028
Query: 423 VRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPM 482
V++W+ +S + H V K + L+S S D T+KVW+ ++ E+
Sbjct: 1029 VQIWNWQSEDPFFL-QAHQETVKDFRLLKNSR--LLSWSFDGTVKVWNI--ITRRIEKDF 1083
Query: 483 NLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSV 542
V++ DI+S A + + S D+TA +W L + RGHK +
Sbjct: 1084 VCHQDTVLSC---DISSDATKFSST-----SADKTAKIWSFELLSPLHELRGHKGCVRCS 1135
Query: 543 EFSPVDQVVITASGDKTIKIWSISDGS----C--LKTFEG---HTSSVLRASFLTRGAQI 593
FS + ++ T + I+IW++S+G C + EG H V F +
Sbjct: 1136 SFSVNNTLLATGDDNGEIRIWNVSNGELLHLCAPISVEEGAATHGGWVTDLCFSPDTKML 1195
Query: 594 VSCGADGLVKLWTVRTGECIATY 616
VS G G +K W V TGE T+
Sbjct: 1196 VSAG--GYLKWWNVVTGESSQTF 1216
Score = 185 (70.2 bits), Expect = 3.4e-09, Sum P(2) = 3.4e-09
Identities = 73/304 (24%), Positives = 135/304 (44%)
Query: 324 ADQQLLLYTTVEVPEKKMELILSKRLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDL 383
AD+ L ++ E EK +E+ + +E+L F +++++A + ++V++++
Sbjct: 637 ADKTLQVFKA-ETGEKLLEI------KAHEDEVLCCAF-SADDKFIATCSVDKKVKIWNS 688
Query: 384 SSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGA 443
+ + HSE V C +S +L+ TGS D ++LWD C GH +
Sbjct: 689 MTGELVRIYDEHSEQVNCCHFTN-NSNHLLLATGSNDYFLKLWDLNQEECRNTMFGHTNS 747
Query: 444 VGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVA 503
V FS Q L S S+D T+K+W D S + + +N+K + + ++ + +
Sbjct: 748 VSHCRFSPDDQ-VLASCSADGTLKLW--DVKSANERKSINVKQFFLNSEEPQE-DLEVIV 803
Query: 504 PNDSLVCTGSQDRTACVWR--LPDLVS----VVTFRGHKRGIWSVEFSPVDQVVITASGD 557
S G++ A + L D+ S GH + +FSP + + + A
Sbjct: 804 KCCSWSADGAKIMVAAKNKVFLFDIHSSGLLAEMHMGHHSAVQYCDFSPHNHLAVVALSQ 863
Query: 558 KTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLW-TVRTGECIATY 616
+++WS+ G + GH S V F G+ ++ D ++LW T + + AT
Sbjct: 864 YCVELWSMDSGLKVADCRGHLSWVHCVMFSPDGSSFLTSSDDQTIRLWETKKVCKNSATV 923
Query: 617 DKHE 620
K E
Sbjct: 924 LKQE 927
Score = 178 (67.7 bits), Expect = 7.8e-16, Sum P(3) = 7.8e-16
Identities = 44/179 (24%), Positives = 83/179 (46%)
Query: 40 ESINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWK 99
E +N ++ N S + + +D + S D + + S G + ++V+ T + L K
Sbjct: 598 EWVNKKNMKNLS-RLVVRPHTDAVYHACFSEDGQRIASCGADKTLQVFKAETGEKLLEIK 656
Query: 100 GHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKS 159
H+ + A +AT D+KV +W+ G + H V+ F +++
Sbjct: 657 AHEDEVLCCAFSADDKFIATCSVDKKVKIWNSMTGELVRIYDEHSEQVNCCHFTNNSNHL 716
Query: 160 LLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLR 218
LL +GS+D +++WDL ++C T+ H + V+ + D L S D + LWD++
Sbjct: 717 LLATGSNDYFLKLWDLNQEECRNTMFGHTNSVSHCRFSPDDQVLASCSADGTLKLWDVK 775
Score = 158 (60.7 bits), Expect = 2.5e-06, Sum P(2) = 2.5e-06
Identities = 45/172 (26%), Positives = 78/172 (45%)
Query: 440 HMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINS 499
H AV FS+ Q + S +D T++V+ ++ E+ + +KA H ++
Sbjct: 616 HTDAVYHACFSEDGQR-IASCGADKTLQVFK----AETGEKLLEIKA------HEDEVLC 664
Query: 500 LAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASG--D 557
A + +D + T S D+ +W V + H + F+ ++ A+G D
Sbjct: 665 CAFSADDKFIATCSVDKKVKIWNSMTGELVRIYDEHSEQVNCCHFTNNSNHLLLATGSND 724
Query: 558 KTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRT 609
+K+W ++ C T GHT+SV F + SC ADG +KLW V++
Sbjct: 725 YFLKLWDLNQEECRNTMFGHTNSVSHCRFSPDDQVLASCSADGTLKLWDVKS 776
Score = 153 (58.9 bits), Expect = 8.5e-06, Sum P(2) = 8.5e-06
Identities = 33/123 (26%), Positives = 56/123 (45%)
Query: 527 VSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASF 586
+S + R H ++ FS Q + + DKT++++ G L + H VL +F
Sbjct: 608 LSRLVVRPHTDAVYHACFSEDGQRIASCGADKTLQVFKAETGEKLLEIKAHEDEVLCCAF 667
Query: 587 LTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTE--MFATGGSDALV 644
I +C D VK+W TGE + YD+H +++ + + ATG +D +
Sbjct: 668 SADDKFIATCSVDKKVKIWNSMTGELVRIYDEHSEQVNCCHFTNNSNHLLLATGSNDYFL 727
Query: 645 NLW 647
LW
Sbjct: 728 KLW 730
Score = 124 (48.7 bits), Expect = 4.5e-10, Sum P(3) = 4.5e-10
Identities = 42/157 (26%), Positives = 71/157 (45%)
Query: 105 AIGMACHPSGGL-LATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFS 163
A+ AC G +A+ GAD+ + V+ + G K H+ V F D DK + +
Sbjct: 619 AVYHACFSEDGQRIASCGADKTLQVFKAETGEKLLEIKAHEDEVLCCAFSAD-DK-FIAT 676
Query: 164 GSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISA--GRDKVVNLWDLRDYS 221
S D V++W+ + + V D+H +V T++ + L+ A D + LWDL
Sbjct: 677 CSVDKKVKIWNSMTGELVRIYDEHSEQVNCCHFTNNSNHLLLATGSNDYFLKLWDLNQEE 736
Query: 222 CKLTVPTYEMVEAVCAIPPGSAFDSFLSSYNQQ-TIK 257
C+ T+ + + C P D L+S + T+K
Sbjct: 737 CRNTMFGHTNSVSHCRFSPD---DQVLASCSADGTLK 770
Score = 118 (46.6 bits), Expect = 7.8e-16, Sum P(3) = 7.8e-16
Identities = 28/151 (18%), Positives = 68/151 (45%)
Query: 497 INSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASG 556
++ ++P+ + G +D + L + + GHK + ++F+ + +I++S
Sbjct: 966 VSCCCLSPHLQYLAFGGEDGAIQILELLNNRIFQSRNGHKTTVRHIQFTADGKTLISSSD 1025
Query: 557 DKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATY 616
D ++IW+ + H +V + L + ++++S DG VK+W + T +
Sbjct: 1026 DSAVQIWNWQSEDPF-FLQAHQETV-KDFRLLKNSRLLSWSFDGTVKVWNIITRRIEKDF 1083
Query: 617 DKHEDKIWALAVGKKTEMFATGGSDALVNLW 647
H+D + + + F++ +D +W
Sbjct: 1084 VCHQDTVLSCDISSDATKFSSTSADKTAKIW 1114
Score = 96 (38.9 bits), Expect = 1.4e-13, Sum P(3) = 1.4e-13
Identities = 39/173 (22%), Positives = 71/173 (41%)
Query: 469 WSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVS 528
WSFDG + + + + H + S ++ + + + S D+TA +W L
Sbjct: 1063 WSFDG-TVKVWNIITRRIEKDFVCHQDTVLSCDISSDATKFSSTSADKTAKIWSFELLSP 1121
Query: 529 VVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLT 588
+ RGHK + FS + ++ T + I+IW++S+G L SV + T
Sbjct: 1122 LHELRGHKGCVRCSSFSVNNTLLATGDDNGEIRIWNVSNGELLHLCA--PISVEEGA-AT 1178
Query: 589 RGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGGSD 641
G + K+ V G + K W + G+ ++ F T G++
Sbjct: 1179 HGGWVTDLCFSPDTKM-LVSAGGYL--------KWWNVVTGESSQTFYTNGTN 1222
Score = 96 (38.9 bits), Expect = 1.4e-13, Sum P(3) = 1.4e-13
Identities = 45/207 (21%), Positives = 87/207 (42%)
Query: 349 LVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALS 408
L + E + D + L + + L+ + + V+V+++ + H + VL +C +S
Sbjct: 1042 LQAHQETVKDFRLL-KNSRLLSWSFD-GTVKVWNIITRRIEKDFVCHQDTVL---SCDIS 1096
Query: 409 SGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKV 468
S + S D + ++W E + GH G V +FS L +G + I++
Sbjct: 1097 SDATKFSSTSADKTAKIWSFELLSPLHELRGHKGCVRCSSFSVN-NTLLATGDDNGEIRI 1155
Query: 469 WSF-DGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDS-LVCTGSQDRTACVWRLPDL 526
W+ +G P++++ A A HG + L +P+ LV G + W +
Sbjct: 1156 WNVSNGELLHLCAPISVEEGA--ATHGGWVTDLCFSPDTKMLVSAGGYLKW---WNVVTG 1210
Query: 527 VSVVTFRGHKRGIWSVEFSPVDQVVIT 553
S TF + + + SP + +T
Sbjct: 1211 ESSQTFYTNGTNLKKIHVSPDFKTYVT 1237
Score = 92 (37.4 bits), Expect = 3.5e-13, Sum P(3) = 3.5e-13
Identities = 35/192 (18%), Positives = 71/192 (36%)
Query: 462 SDHTIKVWSFDGLSDDAEQPMNLKAKAVVAA---HGKDINSLAVAPNDSLVCTGSQDRTA 518
S H ++ +F G D A Q + L + + H + + + + + S D
Sbjct: 972 SPH-LQYLAFGG-EDGAIQILELLNNRIFQSRNGHKTTVRHIQFTADGKTLISSSDDSAV 1029
Query: 519 CVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHT 578
+W + H+ + ++ ++ S D T+K+W+I K F H
Sbjct: 1030 QIWNWQS-EDPFFLQAHQETVKDFRLLKNSRL-LSWSFDGTVKVWNIITRRIEKDFVCHQ 1087
Query: 579 SSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATG 638
+VL + + S AD K+W+ + H+ + + + ATG
Sbjct: 1088 DTVLSCDISSDATKFSSTSADKTAKIWSFELLSPLHELRGHKGCVRCSSFSVNNTLLATG 1147
Query: 639 GSDALVNLWHDS 650
+ + +W+ S
Sbjct: 1148 DDNGEIRIWNVS 1159
Score = 40 (19.1 bits), Expect = 1.1e-18, Sum P(2) = 1.1e-18
Identities = 8/21 (38%), Positives = 13/21 (61%)
Query: 11 GCEPVLQQFYGGGPLVVSSDG 31
G + + +GG P++ SSDG
Sbjct: 81 GYKDLAALLHGGIPVISSSDG 101
>SGD|S000000653 [details] [associations]
symbol:PWP2 "Conserved 90S pre-ribosomal component"
species:4932 "Saccharomyces cerevisiae" [GO:0005730 "nucleolus"
evidence=IEA;IDA] [GO:0000462 "maturation of SSU-rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IMP] [GO:0000480 "endonucleolytic cleavage in 5'-ETS of
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IMP] [GO:0000472 "endonucleolytic cleavage to generate
mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IMP] [GO:0000447 "endonucleolytic cleavage in ITS1 to
separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0030529 "ribonucleoprotein complex" evidence=IEA]
[GO:0030686 "90S preribosome" evidence=IDA] [GO:0032040
"small-subunit processome" evidence=IDA] [GO:0000910 "cytokinesis"
evidence=IMP] [GO:0030010 "establishment of cell polarity"
evidence=IMP] [GO:0034388 "Pwp2p-containing subcomplex of 90S
preribosome" evidence=IDA] [GO:0042254 "ribosome biogenesis"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0030515
"snoRNA binding" evidence=IPI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SGD:S000000653 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030515 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:X59720 EMBL:BK006937 GO:GO:0000910
InterPro:IPR011047 SUPFAM:SSF50998 GO:GO:0030010 GO:GO:0032040
GO:GO:0000447 GO:GO:0000472 GO:GO:0000480
GeneTree:ENSGT00550000074981 HOGENOM:HOG000160363 KO:K14558
OMA:VWQCDTP InterPro:IPR027145 InterPro:IPR007148 PANTHER:PTHR19858
Pfam:PF04003 OrthoDB:EOG4350F7 EMBL:X78964 PIR:S44226
RefSeq:NP_009984.1 ProteinModelPortal:P25635 SMR:P25635
DIP:DIP-1868N IntAct:P25635 MINT:MINT-392472 STRING:P25635
PaxDb:P25635 PeptideAtlas:P25635 EnsemblFungi:YCR057C GeneID:850422
KEGG:sce:YCR057C CYGD:YCR057c NextBio:965992 Genevestigator:P25635
GermOnline:YCR057C GO:GO:0034388 Uniprot:P25635
Length = 923
Score = 260 (96.6 bits), Expect = 1.2e-18, P = 1.2e-18
Identities = 139/583 (23%), Positives = 244/583 (41%)
Query: 66 LALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRK 125
+ S D K L S +R + V+DL K H + + G LL + D +
Sbjct: 20 ITFSDDGKQLLSPVGNR-VSVFDLINNKSFTFEYEHRKNIAAIDLNKQGTLLISIDEDGR 78
Query: 126 VLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVW---DLLAKKCVA 182
++ + H+F K S++ F PD LF+ + +++W D+ + A
Sbjct: 79 AILVNFKARNVLHHFN-FKEKCSAVKFSPD---GRLFALASGRFLQIWKTPDVNKDRQFA 134
Query: 183 TLDKH------FSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYEMVEAVC 236
+H F +TS+ + D +++ +D +W + L T+
Sbjct: 135 PFVRHRVHAGHFQDITSLTWSQDSRFILTTSKDLSAKIWSVDSEEKNLAATTFNGHRDYV 194
Query: 237 AIPPGSAFDSFLSSYNQQTIKKKRRSLEIHFITVGERGIVRMWNADSACLYEQ--KSSDV 294
G+ F S++Q+ I TV + G V +W + +S D
Sbjct: 195 M---GAFF-----SHDQEKI-----------YTVSKDGAVFVWEFTKRPSDDDDNESEDD 235
Query: 295 TISFEMDDSKRGF--TAATVLPSNQGLL-CVT---ADQQLLL-YTTVEVPEKKM-ELILS 346
E+D SK + T +NQ + CVT A + L + +T+ E + + L
Sbjct: 236 DKQEEVDISKYSWRITKKHFFYANQAKVKCVTFHPATRLLAVGFTSGEFRLYDLPDFTLI 295
Query: 347 KRL-VGYNEEILDLKFLGEEEQYLAVATN-IEQVQVYDLSSMSCSYVLA--GHSEIVLCL 402
++L +G N ++ + + ++LA ++ + Q+ VY+ S S Y+L GH +
Sbjct: 296 QQLSMGQNP--VNTVSVNQTGEWLAFGSSKLGQLLVYEWQSES--YILKQQGHFDST--- 348
Query: 403 DTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSS 462
++ A S +VT S+D +++WD S C+ H +V AV F+K+ Q + S S
Sbjct: 349 NSLAYSPDGSRVVTASEDGKIKVWDITSGFCLATFEEHTSSVTAVQFAKRGQ-VMFSSSL 407
Query: 463 DHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTAC-VW 521
D T++ W D + N + N LAV P+ +VC GS D VW
Sbjct: 408 DGTVRAW-------DLIRYRNFRT--FTGTERIQFNCLAVDPSGEVVCAGSLDNFDIHVW 458
Query: 522 RLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSC-LKTFEGHTSS 580
+ + GH+ + + FS + V+ +AS DKTI+IWSI S ++ E + S
Sbjct: 459 SVQTGQLLDALSGHEGPVSCLSFSQENSVLASASWDKTIRIWSIFGRSQQVEPIEVY-SD 517
Query: 581 VLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKI 623
VL S G ++ G + ++ + + + D +D I
Sbjct: 518 VLALSMRPDGKEVAVSTLKGQISIFNIEDAKQVGNIDCRKDII 560
Score = 180 (68.4 bits), Expect = 1.8e-14, Sum P(2) = 1.8e-14
Identities = 40/157 (25%), Positives = 74/157 (47%)
Query: 493 HGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVI 552
H NSLA +P+ S V T S+D VW + + TF H + +V+F+ QV+
Sbjct: 344 HFDSTNSLAYSPDGSRVVTASEDGKIKVWDITSGFCLATFEEHTSSVTAVQFAKRGQVMF 403
Query: 553 TASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGA-DGL-VKLWTVRTG 610
++S D T++ W + +TF G + ++V G+ D + +W+V+TG
Sbjct: 404 SSSLDGTVRAWDLIRYRNFRTFTGTERIQFNCLAVDPSGEVVCAGSLDNFDIHVWSVQTG 463
Query: 611 ECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLW 647
+ + HE + L+ ++ + A+ D + +W
Sbjct: 464 QLLDALSGHEGPVSCLSFSQENSVLASASWDKTIRIW 500
Score = 177 (67.4 bits), Expect = 3.7e-14, Sum P(2) = 3.7e-14
Identities = 50/158 (31%), Positives = 69/158 (43%)
Query: 533 RGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQ 592
+GH S+ +SP V+TAS D IK+W I+ G CL TFE HTSSV F RG
Sbjct: 342 QGHFDSTNSLAYSPDGSRVVTASEDGKIKVWDITSGFCLATFEEHTSSVTAVQFAKRGQV 401
Query: 593 IVSCGADGLVKLWTVRTGECIATYDKHED-KIWALAVGKKTEMFATGGSDAL-VNLWHDS 650
+ S DG V+ W + T+ E + LAV E+ G D +++W
Sbjct: 402 MFSSSLDGTVRAWDLIRYRNFRTFTGTERIQFNCLAVDPSGEVVCAGSLDNFDIHVWSVQ 461
Query: 651 TXXXXXXXXXXXXXXVLRGQELENAVL-DADYTKAIQV 687
T EN+VL A + K I++
Sbjct: 462 TGQLLDALSGHEGPVSCLSFSQENSVLASASWDKTIRI 499
Score = 169 (64.5 bits), Expect = 5.0e-08, Sum P(2) = 5.0e-08
Identities = 43/183 (23%), Positives = 84/183 (45%)
Query: 39 GESINIVDLSNASIKSTIEGGSDTITALALSPDDK-LLFSSGHSREIRVWDLSTLKCLRS 97
GE + DL + ++ + G + + ++++ + L F S ++ V++ + +
Sbjct: 282 GE-FRLYDLPDFTLIQQLSMGQNPVNTVSVNQTGEWLAFGSSKLGQLLVYEWQSESYILK 340
Query: 98 WKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTD 157
+GH +A P G + TA D K+ VWD+ GFC F+ H V+++ F
Sbjct: 341 QQGHFDSTNSLAYSPDGSRVVTASEDGKIKVWDITSGFCLATFEEHTSSVTAVQFAKRGQ 400
Query: 158 KSLLFSGSDDATVRVWDLLAKKCVATLD-KHFSRVTSMAITSDGSTLISAGRDKV-VNLW 215
++FS S D TVR WDL+ + T + +A+ G + + D +++W
Sbjct: 401 --VMFSSSLDGTVRAWDLIRYRNFRTFTGTERIQFNCLAVDPSGEVVCAGSLDNFDIHVW 458
Query: 216 DLR 218
++
Sbjct: 459 SVQ 461
Score = 163 (62.4 bits), Expect = 2.2e-07, Sum P(2) = 2.2e-07
Identities = 44/187 (23%), Positives = 87/187 (46%)
Query: 57 EGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPSGGL 116
+G D+ +LA SPD + ++ +I+VWD+++ CL +++ H + G +
Sbjct: 342 QGHFDSTNSLAYSPDGSRVVTASEDGKIKVWDITSGFCLATFEEHTSSVTAVQFAKRGQV 401
Query: 117 LATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGS-DDATVRVWDL 175
+ ++ D V WD+ F G + + + L D ++ +GS D+ + VW +
Sbjct: 402 MFSSSLDGTVRAWDLIRYRNFRTFTGTERIQFNCLA-VDPSGEVVCAGSLDNFDIHVWSV 460
Query: 176 LAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLT-VPTYEMVEA 234
+ + L H V+ ++ + + S L SA DK + +W + S ++ + Y V A
Sbjct: 461 QTGQLLDALSGHEGPVSCLSFSQENSVLASASWDKTIRIWSIFGRSQQVEPIEVYSDVLA 520
Query: 235 VCAIPPG 241
+ P G
Sbjct: 521 LSMRPDG 527
Score = 162 (62.1 bits), Expect = 2.8e-07, Sum P(2) = 2.8e-07
Identities = 44/180 (24%), Positives = 82/180 (45%)
Query: 63 ITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGA 122
+ + P +LL S E R++DL ++ P ++ + +G LA +
Sbjct: 263 VKCVTFHPATRLLAVGFTSGEFRLYDLPDFTLIQQLSMGQNPVNTVSVNQTGEWLAFGSS 322
Query: 123 DR-KVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCV 181
++LV++ +GH +S+ + PD + + + S+D ++VWD+ + C+
Sbjct: 323 KLGQLLVYEWQSESYILKQQGHFDSTNSLAYSPDGSR--VVTASEDGKIKVWDITSGFCL 380
Query: 182 ATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYEMVEAVC-AIPP 240
AT ++H S VT++ G + S+ D V WDL Y T E ++ C A+ P
Sbjct: 381 ATFEEHTSSVTAVQFAKRGQVMFSSSLDGTVRAWDLIRYRNFRTFTGTERIQFNCLAVDP 440
Score = 93 (37.8 bits), Expect = 1.8e-14, Sum P(2) = 1.8e-14
Identities = 48/224 (21%), Positives = 85/224 (37%)
Query: 6 LKKSYGCEPVLQQFYGGGPLVVSSDGSFIACACGESINIVDL-SNASIKSTIEGGSDTIT 64
+K + +L Y G + S DG + G +++ DL +N S E + I
Sbjct: 1 MKSDFKFSNLLGTVYRQGNITFSDDGKQLLSPVGNRVSVFDLINNKSFTFEYEHRKN-IA 59
Query: 65 ALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADR 124
A+ L+ LL S + + L + + + P G L A A R
Sbjct: 60 AIDLNKQGTLLISIDEDGRAILVNFKARNVLHHFNFKE-KCSAVKFSPDGRLFALASG-R 117
Query: 125 KVLVW---DVD-----GGFCTH-YFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVW-- 173
+ +W DV+ F H GH ++S+ + D+ + + S D + ++W
Sbjct: 118 FLQIWKTPDVNKDRQFAPFVRHRVHAGHFQDITSLTWSQDS--RFILTTSKDLSAKIWSV 175
Query: 174 DLLAKKCVAT-LDKHFSRVTSMAITSDGSTLISAGRDKVVNLWD 216
D K AT + H V + D + + +D V +W+
Sbjct: 176 DSEEKNLAATTFNGHRDYVMGAFFSHDQEKIYTVSKDGAVFVWE 219
Score = 42 (19.8 bits), Expect = 5.0e-08, Sum P(2) = 5.0e-08
Identities = 21/75 (28%), Positives = 34/75 (45%)
Query: 393 AGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVG--VGTGHMGAVGAVAF- 449
A +SE T S + IV G +NS+ L+D + + + + +M G + F
Sbjct: 571 AKNSERSKFFTTIHYSFDGMAIVAGGNNNSICLYDVPNEVLLKRFIVSRNMALNGTLEFL 630
Query: 450 -SKKLQNFLVSGSSD 463
SKK+ +GS D
Sbjct: 631 NSKKMTE---AGSLD 642
Score = 41 (19.5 bits), Expect = 4.3e-09, Sum P(2) = 4.3e-09
Identities = 16/70 (22%), Positives = 28/70 (40%)
Query: 25 LVVSSDGSFIACACGE-SINI--VDLSNASIKST-IEGGSDTITALALSPDDKLLFSSGH 80
L S D FI + S I VD ++ +T G D + S D + +++
Sbjct: 152 LTWSQDSRFILTTSKDLSAKIWSVDSEEKNLAATTFNGHRDYVMGAFFSHDQEKIYTVSK 211
Query: 81 SREIRVWDLS 90
+ VW+ +
Sbjct: 212 DGAVFVWEFT 221
>UNIPROTKB|G3V1X0 [details] [associations]
symbol:POC1B "POC1 centriolar protein homolog B"
species:9606 "Homo sapiens" [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:CH471054
EMBL:AC010201 EMBL:AC025034 UniGene:Hs.25130 KO:K16482 CTD:282809
UniGene:Hs.604487 GeneID:282809 KEGG:hsa:282809 HGNC:HGNC:30836
ChiTaRS:POC1B GenomeRNAi:282809 NextBio:93521 RefSeq:NP_001186706.1
ProteinModelPortal:G3V1X0 SMR:G3V1X0 Ensembl:ENST00000549035
ArrayExpress:G3V1X0 Bgee:G3V1X0 Uniprot:G3V1X0
Length = 436
Score = 252 (93.8 bits), Expect = 1.4e-18, P = 1.4e-18
Identities = 68/259 (26%), Positives = 117/259 (45%)
Query: 389 SYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVA 448
+Y GH ++V + S L+ + S+D +VRLW + R H V +V
Sbjct: 11 AYRYVGHKDVVTSVQ---FSPHGNLLASASRDRTVRLWIPDKRGKFSEFKAHTAPVRSVD 67
Query: 449 FSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSL 508
FS Q FL + S D +IKVWS + + H + +P+ L
Sbjct: 68 FSADGQ-FLATASEDKSIKVWSM----------YRQRFLYSLYRHTHWVRCAKFSPDGRL 116
Query: 509 VCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDG 568
+ + S+D+T +W + V F V+F+P + +A D+T+K+W +
Sbjct: 117 IVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANFVDFNPSGTCIASAGSDQTVKVWDVRVN 176
Query: 569 SCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAV 628
L+ ++ H+ V SF G +++ +DG +K+ + G I T H ++ ++
Sbjct: 177 KLLQHYQVHSGGVNCISFHPSGNYLITASSDGTLKILDLLEGRLIYTLQGHTGPVFTVSF 236
Query: 629 GKKTEMFATGGSDALVNLW 647
K E+FA+GG+D V LW
Sbjct: 237 SKGGELFASGGADTQVLLW 255
Score = 246 (91.7 bits), Expect = 6.9e-18, P = 6.9e-18
Identities = 58/199 (29%), Positives = 100/199 (50%)
Query: 28 SSDGSFIACACGE-SINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRV 86
S+DG F+A A + SI + + ++ + + SPD +L+ S + I++
Sbjct: 69 SADGQFLATASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKI 128
Query: 87 WDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGV 146
WD + +C+ ++ G A + +PSG +A+AG+D+ V VWDV +++ H G
Sbjct: 129 WDTTNKQCVNNFSDSVGFANFVDFNPSGTCIASAGSDQTVKVWDVRVNKLLQHYQVHSGG 188
Query: 147 VSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISA 206
V+ I FHP + L + S D T+++ DLL + + TL H V +++ + G S
Sbjct: 189 VNCISFHPSGN--YLITASSDGTLKILDLLEGRLIYTLQGHTGPVFTVSFSKGGELFASG 246
Query: 207 GRDKVVNLW--DLRDYSCK 223
G D V LW + + CK
Sbjct: 247 GADTQVLLWRTNFDELHCK 265
Score = 206 (77.6 bits), Expect = 2.1e-13, P = 2.1e-13
Identities = 71/264 (26%), Positives = 113/264 (42%)
Query: 348 RLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCAL 407
R VG+ + + ++F LA A+ V+++ H+ V +D A
Sbjct: 13 RYVGHKDVVTSVQF-SPHGNLLASASRDRTVRLWIPDKRGKFSEFKAHTAPVRSVDFSA- 70
Query: 408 SSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIK 467
G+ L T S+D S+++W + + H V FS +VS S D TIK
Sbjct: 71 -DGQFL-ATASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPD-GRLIVSCSEDKTIK 127
Query: 468 VWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLV 527
+W +Q +N + +V A+ D N P+ + + + D+T VW +
Sbjct: 128 IWDTTN-----KQCVNNFSDSVGFANFVDFN-----PSGTCIASAGSDQTVKVWDVRVNK 177
Query: 528 SVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFL 587
+ ++ H G+ + F P +ITAS D T+KI + +G + T +GHT V SF
Sbjct: 178 LLQHYQVHSGGVNCISFHPSGNYLITASSDGTLKILDLLEGRLIYTLQGHTGPVFTVSFS 237
Query: 588 TRGAQIVSCGADGLVKLWTVRTGE 611
G S GAD V LW E
Sbjct: 238 KGGELFASGGADTQVLLWRTNFDE 261
Score = 198 (74.8 bits), Expect = 1.6e-12, P = 1.6e-12
Identities = 46/161 (28%), Positives = 70/161 (43%)
Query: 58 GGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPSGGLL 117
G D +T++ SP LL S+ R +R+W +K H P + G L
Sbjct: 16 GHKDVVTSVQFSPHGNLLASASRDRTVRLWIPDKRGKFSEFKAHTAPVRSVDFSADGQFL 75
Query: 118 ATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLA 177
ATA D+ + VW + + H V F PD L+ S S+D T+++WD
Sbjct: 76 ATASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDG--RLIVSCSEDKTIKIWDTTN 133
Query: 178 KKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLR 218
K+CV + G+ + SAG D+ V +WD+R
Sbjct: 134 KQCVNNFSDSVGFANFVDFNPSGTCIASAGSDQTVKVWDVR 174
Score = 167 (63.8 bits), Expect = 4.3e-09, P = 4.3e-09
Identities = 39/139 (28%), Positives = 63/139 (45%)
Query: 86 VWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVW--DVDGGFCTHYFKGH 143
+W+ + GH + P G LLA+A DR V +W D G F FK H
Sbjct: 2 LWNFKPHARAYRYVGHKDVVTSVQFSPHGNLLASASRDRTVRLWIPDKRGKFSE--FKAH 59
Query: 144 KGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTL 203
V S+ F D L + S+D +++VW + ++ + +L +H V + DG +
Sbjct: 60 TAPVRSVDF--SADGQFLATASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLI 117
Query: 204 ISAGRDKVVNLWDLRDYSC 222
+S DK + +WD + C
Sbjct: 118 VSCSEDKTIKIWDTTNKQC 136
Score = 131 (51.2 bits), Expect = 3.9e-05, P = 3.9e-05
Identities = 28/132 (21%), Positives = 56/132 (42%)
Query: 520 VWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTS 579
+W + GHK + SV+FSP ++ +AS D+T+++W F+ HT+
Sbjct: 2 LWNFKPHARAYRYVGHKDVVTSVQFSPHGNLLASASRDRTVRLWIPDKRGKFSEFKAHTA 61
Query: 580 SVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWALAVGKKTEMFATGG 639
V F G + + D +K+W++ + + +H + + +
Sbjct: 62 PVRSVDFSADGQFLATASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCS 121
Query: 640 SDALVNLWHDST 651
D + +W D+T
Sbjct: 122 EDKTIKIW-DTT 132
Score = 120 (47.3 bits), Expect = 0.00061, P = 0.00061
Identities = 39/134 (29%), Positives = 61/134 (45%)
Query: 127 LVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDK 186
++W+ + + GHK VV+S+ F P + LL S S D TVR+W + +
Sbjct: 1 MLWNFKPHARAYRYVGHKDVVTSVQFSPHGN--LLASASRDRTVRLWIPDKRGKFSEFKA 58
Query: 187 HFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTYEMVEAV-CA--IPPGSA 243
H + V S+ ++DG L +A DK + +W + Y + Y V CA P G
Sbjct: 59 HTAPVRSVDFSADGQFLATASEDKSIKVWSM--YRQRFLYSLYRHTHWVRCAKFSPDGRL 116
Query: 244 FDSFLSSYNQQTIK 257
+S +TIK
Sbjct: 117 I---VSCSEDKTIK 127
>TAIR|locus:2005539 [details] [associations]
symbol:PRL1 "AT4G15900" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0009870 "defense
response signaling pathway, resistance gene-dependent"
evidence=IMP] [GO:0010204 "defense response signaling pathway,
resistance gene-independent" evidence=IMP] [GO:0042742 "defense
response to bacterium" evidence=IMP] [GO:0050832 "defense response
to fungus" evidence=IMP] [GO:0006508 "proteolysis" evidence=IMP]
[GO:0009755 "hormone-mediated signaling pathway" evidence=RCA;IMP]
[GO:0010154 "fruit development" evidence=IMP] [GO:0010182 "sugar
mediated signaling pathway" evidence=RCA;IMP] [GO:0048364 "root
development" evidence=IMP] [GO:0048366 "leaf development"
evidence=RCA;IMP] [GO:0048825 "cotyledon development"
evidence=RCA;IMP] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=IPI] [GO:0000278 "mitotic cell cycle" evidence=RCA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=RCA] [GO:0006396 "RNA processing" evidence=RCA]
[GO:0007062 "sister chromatid cohesion" evidence=RCA] [GO:0009640
"photomorphogenesis" evidence=RCA] [GO:0009793 "embryo development
ending in seed dormancy" evidence=RCA] [GO:0009845 "seed
germination" evidence=RCA] [GO:0009880 "embryonic pattern
specification" evidence=RCA] [GO:0009909 "regulation of flower
development" evidence=RCA] [GO:0009933 "meristem structural
organization" evidence=RCA] [GO:0010072 "primary shoot apical
meristem specification" evidence=RCA] [GO:0010162 "seed dormancy
process" evidence=RCA] [GO:0010228 "vegetative to reproductive
phase transition of meristem" evidence=RCA] [GO:0010431 "seed
maturation" evidence=RCA] [GO:0010564 "regulation of cell cycle
process" evidence=RCA] [GO:0016567 "protein ubiquitination"
evidence=RCA] [GO:0019915 "lipid storage" evidence=RCA] [GO:0043687
"post-translational protein modification" evidence=RCA] [GO:0045595
"regulation of cell differentiation" evidence=RCA] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=RCA]
[GO:0050826 "response to freezing" evidence=RCA] [GO:0051301 "cell
division" evidence=RCA] [GO:0009749 "response to glucose stimulus"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 UniPathway:UPA00143 GO:GO:0005634 GO:GO:0045892
EMBL:CP002687 GenomeReviews:CT486007_GR Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0050832
GO:GO:0009749 GO:GO:0042742 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006508 GO:GO:0045087 GO:GO:0048364
GO:GO:0010182 GO:GO:0016567 GO:GO:0009870 GO:GO:0009755
GO:GO:0048366 GO:GO:0048825 EMBL:Z97339 GO:GO:0010204 GO:GO:0080008
EMBL:AL161542 HOGENOM:HOG000207595 KO:K12862 OMA:ITAEADK
EMBL:X82824 EMBL:X82825 IPI:IPI00524936 PIR:S49820
RefSeq:NP_193325.1 UniGene:At.103 ProteinModelPortal:Q42384
SMR:Q42384 IntAct:Q42384 STRING:Q42384 PaxDb:Q42384 PRIDE:Q42384
EnsemblPlants:AT4G15900.1 GeneID:827272 KEGG:ath:AT4G15900
GeneFarm:2847 TAIR:At4g15900 InParanoid:Q42384 PhylomeDB:Q42384
ProtClustDB:CLSN2685622 Genevestigator:Q42384 GermOnline:AT4G15900
Uniprot:Q42384
Length = 486
Score = 237 (88.5 bits), Expect = 1.5e-18, Sum P(2) = 1.5e-18
Identities = 54/177 (30%), Positives = 86/177 (48%)
Query: 33 FIACACGESINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTL 92
F + +I I D++ +K T+ G + + LA+S +FS+G ++++ WDL
Sbjct: 191 FCTGSADRTIKIWDVATGVLKLTLTGHIEQVRGLAVSNRHTYMFSAGDDKQVKCWDLEQN 250
Query: 93 KCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILF 152
K +RS+ GH +A HP+ +L T G D VWD+ GH V S+
Sbjct: 251 KVIRSYHGHLSGVYCLALHPTLDVLLTGGRDSVCRVWDIRTKMQIFALSGHDNTVCSVFT 310
Query: 153 HPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRD 209
P TD ++ +GS D T++ WDL K ++TL H V +M + + SA D
Sbjct: 311 RP-TDPQVV-TGSHDTTIKFWDLRYGKTMSTLTHHKKSVRAMTLHPKENAFASASAD 365
Score = 220 (82.5 bits), Expect = 7.9e-15, P = 7.9e-15
Identities = 66/235 (28%), Positives = 102/235 (43%)
Query: 416 TGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLS 475
TGS D ++++WD + TGH+ V +A S + ++ S D +K W
Sbjct: 193 TGSADRTIKIWDVATGVLKLTLTGHIEQVRGLAVSNR-HTYMFSAGDDKQVKCW------ 245
Query: 476 DDAEQPMNLKAKAVVAAHG--KDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFR 533
D EQ N K + + HG + LA+ P ++ TG +D VW + + +
Sbjct: 246 -DLEQ--N---KVIRSYHGHLSGVYCLALHPTLDVLLTGGRDSVCRVWDIRTKMQIFALS 299
Query: 534 GHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQI 593
GH + SV P D V+T S D TIK W + G + T H SV + +
Sbjct: 300 GHDNTVCSVFTRPTDPQVVTGSHDTTIKFWDLRYGKTMSTLTHHKKSVRAMTLHPKENAF 359
Query: 594 VSCGADGLVKLWTVRTGE-CIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLW 647
S AD K +++ GE C + + I A+AV + M TGG + + W
Sbjct: 360 ASASADN-TKKFSLPKGEFCHNMLSQQKTIINAMAVNEDGVM-VTGGDNGSIWFW 412
Score = 210 (79.0 bits), Expect = 1.0e-13, P = 1.0e-13
Identities = 54/205 (26%), Positives = 95/205 (46%)
Query: 439 GHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDIN 498
GH+G V +VAF + F +GS+D TIK+W D A + L + H + +
Sbjct: 174 GHLGWVRSVAFDPSNEWFC-TGSADRTIKIW------DVATGVLKL----TLTGHIEQVR 222
Query: 499 SLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDK 558
LAV+ + + + D+ W L + ++ GH G++ + P V++T D
Sbjct: 223 GLAVSNRHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLALHPTLDVLLTGGRDS 282
Query: 559 TIKIWSISDGSCLKTFEGHTSSVLRASFLTRGA--QIVSCGADGLVKLWTVRTGECIATY 616
++W I + GH ++V S TR Q+V+ D +K W +R G+ ++T
Sbjct: 283 VCRVWDIRTKMQIFALSGHDNTV--CSVFTRPTDPQVVTGSHDTTIKFWDLRYGKTMSTL 340
Query: 617 DKHEDKIWALAVGKKTEMFATGGSD 641
H+ + A+ + K FA+ +D
Sbjct: 341 THHKKSVRAMTLHPKENAFASASAD 365
Score = 199 (75.1 bits), Expect = 2.9e-14, Sum P(2) = 2.9e-14
Identities = 50/193 (25%), Positives = 88/193 (45%)
Query: 56 IEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPSGG 115
I+G + ++A P ++ + R I++WD++T + GH G+A
Sbjct: 172 IQGHLGWVRSVAFDPSNEWFCTGSADRTIKIWDVATGVLKLTLTGHIEQVRGLAVSNRHT 231
Query: 116 LLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDL 175
+ +AG D++V WD++ + GH V + HP D +L +G D+ RVWD+
Sbjct: 232 YMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLALHPTLD--VLLTGGRDSVCRVWDI 289
Query: 176 LAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTVPTY--EMVE 233
K + L H + V S+ +++ D + WDLR Y ++ T+ + V
Sbjct: 290 RTKMQIFALSGHDNTVCSVFTRPTDPQVVTGSHDTTIKFWDLR-YGKTMSTLTHHKKSVR 348
Query: 234 AVCAIPPGSAFDS 246
A+ P +AF S
Sbjct: 349 AMTLHPKENAFAS 361
Score = 185 (70.2 bits), Expect = 5.7e-11, P = 5.7e-11
Identities = 64/280 (22%), Positives = 114/280 (40%)
Query: 378 VQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVG 437
++++D+++ L GH E V L A+S+ + + D V+ WD E +
Sbjct: 200 IKIWDVATGVLKLTLTGHIEQVRGL---AVSNRHTYMFSAGDDKQVKCWDLEQNKVIRSY 256
Query: 438 TGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDI 497
GH+ V +A L + L++G D +VW D M + A ++ H +
Sbjct: 257 HGHLSGVYCLALHPTL-DVLLTGGRDSVCRVW-------DIRTKMQIFA---LSGHDNTV 305
Query: 498 NSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGD 557
S+ P D V TGS D T W L ++ T HK+ + ++ P + +AS D
Sbjct: 306 CSVFTRPTDPQVVTGSHDTTIKFWDLRYGKTMSTLTHHKKSVRAMTLHPKENAFASASAD 365
Query: 558 KTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTG------E 611
T K +S+ G +++ A + +V+ G +G + W ++G E
Sbjct: 366 NTKK-FSLPKGEFCHNMLSQQKTIINAMAVNEDGVMVTGGDNGSIWFWDWKSGHSFQQSE 424
Query: 612 CIATYDKHEDK--IWALAVGKKTEMFATGGSDALVNLWHD 649
I E + I+A T +D + +W +
Sbjct: 425 TIVQPGSLESEAGIYAACYDNTGSRLVTCEADKTIKMWKE 464
Score = 183 (69.5 bits), Expect = 9.4e-11, P = 9.4e-11
Identities = 46/198 (23%), Positives = 80/198 (40%)
Query: 489 VVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVD 548
V+ H + S+A P++ CTGS DRT +W + V +T GH + + S
Sbjct: 171 VIQGHLGWVRSVAFDPSNEWFCTGSADRTIKIWDVATGVLKLTLTGHIEQVRGLAVSNRH 230
Query: 549 QVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVR 608
+ +A DK +K W + ++++ GH S V + +++ G D + ++W +R
Sbjct: 231 TYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLALHPTLDVLLTGGRDSVCRVWDIR 290
Query: 609 TGECIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLW---HDSTXXXXXXXXXXXXXX 665
T I H++ + ++ TG D + W + T
Sbjct: 291 TKMQIFALSGHDNTVCSVFTRPTDPQVVTGSHDTTIKFWDLRYGKTMSTLTHHKKSVRAM 350
Query: 666 VLRGQELENAVLDADYTK 683
L +E A AD TK
Sbjct: 351 TLHPKENAFASASADNTK 368
Score = 182 (69.1 bits), Expect = 1.2e-10, P = 1.2e-10
Identities = 71/300 (23%), Positives = 131/300 (43%)
Query: 314 PSNQGLLCVTADQQLLLYTTVEVPEKKMELILSKRLVGYNEEILDLKFLGEEEQYLAVAT 373
PSN+ +AD+ + ++ +V ++L L+ G+ E++ L + Y+ A
Sbjct: 186 PSNEWFCTGSADRTIKIW---DVATGVLKLTLT----GHIEQVRGLA-VSNRHTYMFSAG 237
Query: 374 NIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCC 433
+ +QV+ +DL GH V CL AL +++TG +D+ R+WD ++
Sbjct: 238 DDKQVKCWDLEQNKVIRSYHGHLSGVYCL---ALHPTLDVLLTGGRDSVCRVWDIRTKMQ 294
Query: 434 VGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAH 493
+ +GH V +V F++ +V+GS D TIK W D K + + H
Sbjct: 295 IFALSGHDNTVCSV-FTRPTDPQVVTGSHDTTIKFW-------DLRYG---KTMSTLTHH 343
Query: 494 GKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVIT 553
K + ++ + P ++ + S D T + LP ++ I + D V++T
Sbjct: 344 KKSVRAMTLHPKENAFASASADNTK-KFSLPKGEFCHNMLSQQKTIINAMAVNEDGVMVT 402
Query: 554 ASGDKTIKIWSISDGSCLKTFE-----GHTSS---VLRASFLTRGAQIVSCGADGLVKLW 605
+ +I W G + E G S + A + G+++V+C AD +K+W
Sbjct: 403 GGDNGSIWFWDWKSGHSFQQSETIVQPGSLESEAGIYAACYDNTGSRLVTCEADKTIKMW 462
Score = 163 (62.4 bits), Expect = 3.9e-15, Sum P(2) = 3.9e-15
Identities = 40/126 (31%), Positives = 56/126 (44%)
Query: 93 KCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILF 152
K R +GH G +A PS T ADR + +WDV G GH V +
Sbjct: 167 KNYRVIQGHLGWVRSVAFDPSNEWFCTGSADRTIKIWDVATGVLKLTLTGHIEQVRGLAV 226
Query: 153 HPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVV 212
+ +FS DD V+ WDL K + + H S V +A+ L++ GRD V
Sbjct: 227 --SNRHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLALHPTLDVLLTGGRDSVC 284
Query: 213 NLWDLR 218
+WD+R
Sbjct: 285 RVWDIR 290
Score = 124 (48.7 bits), Expect = 0.00027, P = 0.00027
Identities = 36/168 (21%), Positives = 69/168 (41%)
Query: 56 IEGGSDTITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPSGG 115
+ G +T+ ++ P D + + H I+ WDL K + + H M HP
Sbjct: 298 LSGHDNTVCSVFTRPTDPQVVTGSHDTTIKFWDLRYGKTMSTLTHHKKSVRAMTLHPKEN 357
Query: 116 LLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDL 175
A+A AD G FC + K +++++ + D ++ +G D+ ++ WD
Sbjct: 358 AFASASADNTKKFSLPKGEFCHNMLSQQKTIINAMAVNED---GVMVTGGDNGSIWFWDW 414
Query: 176 LAKKCVA---TLDKHFSRVTSMAI-----TSDGSTLISAGRDKVVNLW 215
+ T+ + S + I + GS L++ DK + +W
Sbjct: 415 KSGHSFQQSETIVQPGSLESEAGIYAACYDNTGSRLVTCEADKTIKMW 462
Score = 109 (43.4 bits), Expect = 3.9e-15, Sum P(2) = 3.9e-15
Identities = 48/203 (23%), Positives = 85/203 (41%)
Query: 379 QVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVGT 438
+V+D+ + + L+GH V + T +VTGS D +++ WD + T
Sbjct: 285 RVWDIRTKMQIFALSGHDNTVCSVFTRPTDPQ---VVTGSHDTTIKFWDLRYGKTMSTLT 341
Query: 439 GHMGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDIN 498
H +V A+ K +N S S+D+T K F + M + K + IN
Sbjct: 342 HHKKSVRAMTLHPK-ENAFASASADNTKK---FSLPKGEFCHNMLSQQKTI-------IN 390
Query: 499 SLAVAPNDSLVCTGSQDRTACVWRLPDLVS-----VVTFRGH---KRGIWSVEFSPVDQV 550
++AV D ++ TG + + W S + G + GI++ +
Sbjct: 391 AMAVN-EDGVMVTGGDNGSIWFWDWKSGHSFQQSETIVQPGSLESEAGIYAACYDNTGSR 449
Query: 551 VITASGDKTIKIWSISDGSCLKT 573
++T DKTIK+W + + +T
Sbjct: 450 LVTCEADKTIKMWKEDENATPET 472
Score = 62 (26.9 bits), Expect = 1.5e-18, Sum P(2) = 1.5e-18
Identities = 22/80 (27%), Positives = 34/80 (42%)
Query: 413 LIVTGSKDNSVRLWD-------SESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDHT 465
++VTG + S+ WD +S V G+ A A + LV+ +D T
Sbjct: 399 VMVTGGDNGSIWFWDWKSGHSFQQSETIVQPGSLESEAGIYAACYDNTGSRLVTCEADKT 458
Query: 466 IKVWSFDGLSDDAEQPMNLK 485
IK+W D + P+N K
Sbjct: 459 IKMWKEDENATPETHPINFK 478
Score = 49 (22.3 bits), Expect = 3.3e-17, Sum P(2) = 3.3e-17
Identities = 25/105 (23%), Positives = 45/105 (42%)
Query: 237 AIPPGSAFDSFLSSYNQQTIKKKRRSLEIH-FITVGERGIVRMWNADSACLYEQKSSDVT 295
++P G + LS Q+TI E +T G+ G + W+ S ++Q S+
Sbjct: 371 SLPKGEFCHNMLSQ--QKTIINAMAVNEDGVMVTGGDNGSIWFWDWKSGHSFQQ--SETI 426
Query: 296 ISFEMDDSKRGFTAATVLPSNQGLLCVTADQQLLLYTTVE--VPE 338
+ +S+ G AA + L+ AD+ + ++ E PE
Sbjct: 427 VQPGSLESEAGIYAACYDNTGSRLVTCEADKTIKMWKEDENATPE 471
>MGI|MGI:2441730 [details] [associations]
symbol:Tbl1xr1 "transducin (beta)-like 1X-linked receptor 1"
species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0003677 "DNA binding" evidence=IDA] [GO:0003714 "transcription
corepressor activity" evidence=ISO;IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=ISO;IC]
[GO:0005876 "spindle microtubule" evidence=ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0008013 "beta-catenin binding" evidence=ISO] [GO:0016568
"chromatin modification" evidence=IEA] [GO:0017053 "transcriptional
repressor complex" evidence=ISO] [GO:0042393 "histone binding"
evidence=ISO] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IMP] [GO:0044212 "transcription
regulatory region DNA binding" evidence=ISO;IDA] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=IMP]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISO;IMP] [GO:0047485
"protein N-terminus binding" evidence=ISO] [GO:0060070 "canonical
Wnt receptor signaling pathway" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 MGI:MGI:2441730 GO:GO:0017053
GO:GO:0003714 GO:GO:0045892 GO:GO:0005654 GO:GO:0043161
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0045944 GO:GO:0006351 GO:GO:0016568 GO:GO:0000122
GO:GO:0044212 InterPro:IPR013720 Pfam:PF08513 GO:GO:0060070
GO:GO:0005876 GO:GO:0000118 GeneTree:ENSGT00690000102024 KO:K04508
CTD:79718 HOGENOM:HOG000220902 HOVERGEN:HBG050240 OMA:LANNHAD
OrthoDB:EOG412M5M ChiTaRS:TBL1XR1 EMBL:AF268195 EMBL:AK029595
EMBL:AK033347 EMBL:AK036064 EMBL:AK136255 EMBL:BC018512
IPI:IPI00308283 RefSeq:NP_109657.2 UniGene:Mm.202966
UniGene:Mm.446265 ProteinModelPortal:Q8BHJ5 SMR:Q8BHJ5
IntAct:Q8BHJ5 STRING:Q8BHJ5 PhosphoSite:Q8BHJ5 PaxDb:Q8BHJ5
PRIDE:Q8BHJ5 DNASU:81004 Ensembl:ENSMUST00000063988 GeneID:81004
KEGG:mmu:81004 InParanoid:Q8BHJ5 NextBio:350342 Bgee:Q8BHJ5
CleanEx:MM_TBL1XR1 Genevestigator:Q8BHJ5
GermOnline:ENSMUSG00000027630 Uniprot:Q8BHJ5
Length = 514
Score = 254 (94.5 bits), Expect = 1.6e-18, P = 1.6e-18
Identities = 84/340 (24%), Positives = 145/340 (42%)
Query: 334 VEVPEKKMELILSKRLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCS---- 389
VE+P K + L G+ E+ + LA + ++++LS S S
Sbjct: 155 VEIPSNKAVV-----LRGHESEVFICAW-NPVSDLLASGSGDSTARIWNLSENSTSGPTQ 208
Query: 390 YVLA-----GHSEIVLCLDTCAL--SSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMG 442
VL G ++ D +L +S L+ TGS D R+W + +G H G
Sbjct: 209 LVLRHCIREGGQDVPSNKDVTSLDWNSEGTLLATGSYDGFARIWTKDGNLASTLGQ-HKG 267
Query: 443 AVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAV 502
+ A+ ++KK NF++S D T +W D + +A+Q + + + N+ A
Sbjct: 268 PIFALKWNKK-GNFILSAGVDKTTIIW--DAHTGEAKQQFPFHSAPALDVDWQSNNTFAS 324
Query: 503 APNDSL--VCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTI 560
D VC QDR P + TF+GH + ++++ P ++ + S D T+
Sbjct: 325 CSTDMCIHVCKLGQDR-------P----IKTFQGHTNEVNAIKWDPTGNLLASCSDDMTL 373
Query: 561 KIWSISDGSCLKTFEGHTSSVLRASFLTRGA---------QIVSCGADGLVKLWTVRTGE 611
KIWS+ +C+ + H + + G + S D V+LW V G
Sbjct: 374 KIWSMKQDNCVHDLQAHNKEIYTIKWSPTGPGTNNPNANLMLASASFDSTVRLWDVDRGI 433
Query: 612 CIATYDKHEDKIWALAVGKKTEMFATGGSDALVNLWHDST 651
CI T KH++ ++++A A+G D V++W+ T
Sbjct: 434 CIHTLTKHQEPVYSVAFSPDGRYLASGSFDKCVHIWNTQT 473
Score = 176 (67.0 bits), Expect = 6.2e-10, P = 6.2e-10
Identities = 43/140 (30%), Positives = 70/140 (50%)
Query: 84 IRVWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKGH 143
I V L + +++++GH + P+G LLA+ D + +W + C H + H
Sbjct: 331 IHVCKLGQDRPIKTFQGHTNEVNAIKWDPTGNLLASCSDDMTLKIWSMKQDNCVHDLQAH 390
Query: 144 KGVVSSILFHPD---TDKS----LLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAI 196
+ +I + P T+ +L S S D+TVR+WD+ C+ TL KH V S+A
Sbjct: 391 NKEIYTIKWSPTGPGTNNPNANLMLASASFDSTVRLWDVDRGICIHTLTKHQEPVYSVAF 450
Query: 197 TSDGSTLISAGRDKVVNLWD 216
+ DG L S DK V++W+
Sbjct: 451 SPDGRYLASGSFDKCVHIWN 470
Score = 172 (65.6 bits), Expect = 1.7e-09, P = 1.7e-09
Identities = 43/155 (27%), Positives = 70/155 (45%)
Query: 29 SDGSFIACACGESINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWD 88
S+ +F +C+ I++ L T +G ++ + A+ P LL S +++W
Sbjct: 318 SNNTFASCSTDMCIHVCKLGQDRPIKTFQGHTNEVNAIKWDPTGNLLASCSDDMTLKIWS 377
Query: 89 LSTLKCLRSWKGHDGPAIGMACHPSG-G--------LLATAGADRKVLVWDVDGGFCTHY 139
+ C+ + H+ + P+G G +LA+A D V +WDVD G C H
Sbjct: 378 MKQDNCVHDLQAHNKEIYTIKWSPTGPGTNNPNANLMLASASFDSTVRLWDVDRGICIHT 437
Query: 140 FKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWD 174
H+ V S+ F PD L SGS D V +W+
Sbjct: 438 LTKHQEPVYSVAFSPDG--RYLASGSFDKCVHIWN 470
Score = 158 (60.7 bits), Expect = 3.0e-13, Sum P(2) = 3.0e-13
Identities = 40/166 (24%), Positives = 78/166 (46%)
Query: 493 HGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPV----- 547
H ++N++ P +L+ + S D T +W + V + H + I+++++SP
Sbjct: 348 HTNEVNAIKWDPTGNLLASCSDDMTLKIWSMKQDNCVHDLQAHNKEIYTIKWSPTGPGTN 407
Query: 548 ----DQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVK 603
+ ++ +AS D T+++W + G C+ T H V +F G + S D V
Sbjct: 408 NPNANLMLASASFDSTVRLWDVDRGICIHTLTKHQEPVYSVAFSPDGRYLASGSFDKCVH 467
Query: 604 LWTVRTGECIATYDKHEDKIWAL---AVGKKTEMFATGGSDALVNL 646
+W +TG + +Y + I+ + A G K A+ GS +++L
Sbjct: 468 IWNTQTGALVHSY-RGTGGIFEVCWNAAGDKVGASASDGSVCVLDL 512
Score = 134 (52.2 bits), Expect = 3.2e-07, Sum P(2) = 3.2e-07
Identities = 40/173 (23%), Positives = 69/173 (39%)
Query: 57 EGGSDT-----ITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKG-HDGPAIGMAC 110
EGG D +T+L + + LL + + R+W L S G H GP +
Sbjct: 217 EGGQDVPSNKDVTSLDWNSEGTLLATGSYDGFARIWTKDGN--LASTLGQHKGPIFALKW 274
Query: 111 HPSGGLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSG-SDDAT 169
+ G + +AG D+ ++WD G F H + D + F+ S D
Sbjct: 275 NKKGNFILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDV----DWQSNNTFASCSTDMC 330
Query: 170 VRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSC 222
+ V L + + T H + V ++ G+ L S D + +W ++ +C
Sbjct: 331 IHVCKLGQDRPIKTFQGHTNEVNAIKWDPTGNLLASCSDDMTLKIWSMKQDNC 383
Score = 123 (48.4 bits), Expect = 0.00037, P = 0.00037
Identities = 52/201 (25%), Positives = 86/201 (42%)
Query: 461 SSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACV 520
+++HT + DG D E P N KA V+ H ++ A P L+ +GS D TA +
Sbjct: 142 ANNHT-DMMEVDG---DVEIPSN-KA-VVLRGHESEVFICAWNPVSDLLASGSGDSTARI 195
Query: 521 WRLPD--------LVSVVTFR--GH----KRGIWSVEFSPVDQVVITASGDKTIKIWSIS 566
W L + LV R G + + S++++ ++ T S D +IW+
Sbjct: 196 WNLSENSTSGPTQLVLRHCIREGGQDVPSNKDVTSLDWNSEGTLLATGSYDGFARIWT-K 254
Query: 567 DGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIWAL 626
DG+ T H + + +G I+S G D +W TGE + H AL
Sbjct: 255 DGNLASTLGQHKGPIFALKWNKKGNFILSAGVDKTTIIWDAHTGEAKQQFPFHSAP--AL 312
Query: 627 AVG-KKTEMFATGGSDALVNL 646
V + FA+ +D +++
Sbjct: 313 DVDWQSNNTFASCSTDMCIHV 333
Score = 97 (39.2 bits), Expect = 3.0e-13, Sum P(2) = 3.0e-13
Identities = 33/141 (23%), Positives = 59/141 (41%)
Query: 99 KGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCT--------HYFK-GHKGVVSS 149
+GH+ A +P LLA+ D +W++ + H + G + V S+
Sbjct: 166 RGHESEVFICAWNPVSDLLASGSGDSTARIWNLSENSTSGPTQLVLRHCIREGGQDVPSN 225
Query: 150 ---ILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISA 206
+++ +LL +GS D R+W +TL +H + ++ G+ ++SA
Sbjct: 226 KDVTSLDWNSEGTLLATGSYDGFARIWTKDGN-LASTLGQHKGPIFALKWNKKGNFILSA 284
Query: 207 GRDKVVNLWDLRDYSCKLTVP 227
G DK +WD K P
Sbjct: 285 GVDKTTIIWDAHTGEAKQQFP 305
Score = 64 (27.6 bits), Expect = 3.2e-07, Sum P(2) = 3.2e-07
Identities = 21/73 (28%), Positives = 35/73 (47%)
Query: 369 LAVATNIEQVQVYDLSSMSCSYVLAGHSEIVLCLDTCALSSGKILIVTGSKDNSVRLWDS 428
LA A+ V+++D+ C + L H E V + A S + +GS D V +W++
Sbjct: 415 LASASFDSTVRLWDVDRGICIHTLTKHQEPVYSV---AFSPDGRYLASGSFDKCVHIWNT 471
Query: 429 ESRCCVGV--GTG 439
++ V GTG
Sbjct: 472 QTGALVHSYRGTG 484
>RGD|2321145 [details] [associations]
symbol:Fbxw7 "F-box and WD repeat domain containing 7, E3
ubiquitin protein ligase" species:10116 "Rattus norvegicus"
[GO:0001570 "vasculogenesis" evidence=ISO] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0005634 "nucleus" evidence=ISO] [GO:0005654
"nucleoplasm" evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO]
[GO:0005783 "endoplasmic reticulum" evidence=ISO] [GO:0005794
"Golgi apparatus" evidence=ISO] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0006974 "response
to DNA damage stimulus" evidence=ISO] [GO:0007062 "sister chromatid
cohesion" evidence=ISO] [GO:0007219 "Notch signaling pathway"
evidence=ISO] [GO:0016567 "protein ubiquitination" evidence=ISO]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=ISO]
[GO:0030324 "lung development" evidence=ISO] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=ISO] [GO:0032876 "negative regulation of DNA
endoreduplication" evidence=ISO] [GO:0034644 "cellular response to
UV" evidence=ISO] [GO:0043234 "protein complex" evidence=ISO]
[GO:0045741 "positive regulation of epidermal growth
factor-activated receptor activity" evidence=ISO] [GO:0048471
"perinuclear region of cytoplasm" evidence=ISO] [GO:0050821
"protein stabilization" evidence=ISO] [GO:0070374 "positive
regulation of ERK1 and ERK2 cascade" evidence=ISO] [GO:2000060
"positive regulation of protein ubiquitination involved in
ubiquitin-dependent protein catabolic process" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 RGD:2321145
GO:GO:0005783 GO:GO:0005794 GO:GO:0050821 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219
GO:GO:0045741 GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0006974
GO:GO:0016567 GO:GO:0019005 GO:GO:0034644 GO:GO:0032876
GO:GO:2000060 GO:GO:0031146 GO:GO:0007062
GeneTree:ENSGT00690000101849 OrthoDB:EOG4MKNFW IPI:IPI00212282
ProteinModelPortal:D3ZQU4 Ensembl:ENSRNOT00000015279
UCSC:RGD:2321145 ArrayExpress:D3ZQU4 Uniprot:D3ZQU4
Length = 588
Score = 255 (94.8 bits), Expect = 1.8e-18, P = 1.8e-18
Identities = 67/231 (29%), Positives = 112/231 (48%)
Query: 391 VLAGHSE-IVLCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAF 449
VL GH + ++ CL C G IV+GS DN++++W + + C+ GH G V +
Sbjct: 297 VLKGHDDHVITCLQFC----GN-RIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWS--- 348
Query: 450 SKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLV 509
S+ N ++SGS+D T+KVW+ AE + + +G + ++ V
Sbjct: 349 SQMRDNIIISGSTDRTLKVWN-------AET-----GECIHTLYGHTSTVRCMHLHEKRV 396
Query: 510 CTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGS 569
+GS+D T VW + + GH + V++ + V++ + D +K+W +
Sbjct: 397 VSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYD--GRRVVSGAYDFMVKVWDPETET 454
Query: 570 CLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHE 620
CL T +GHT+ V F G +VS D +++W V TG CI T H+
Sbjct: 455 CLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQ 503
Score = 216 (81.1 bits), Expect = 3.4e-14, P = 3.4e-14
Identities = 58/210 (27%), Positives = 92/210 (43%)
Query: 30 DGSFIACACGESINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIRVWDL 89
D I+ + ++ + + T+ G + T+ + L +K + S +RVWD+
Sbjct: 353 DNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLH--EKRVVSGSRDATLRVWDI 410
Query: 90 STLKCLRSWKGHDGPAIGMACHPSGGLLATAGA-DRKVLVWDVDGGFCTHYFKGHKGVVS 148
T +CL GH + C G +GA D V VWD + C H +GH V
Sbjct: 411 ETGQCLHVLMGH---VAAVRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVY 467
Query: 149 SILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGR 208
S+ F D + SGS D ++RVWD+ C+ TL H S + M + + L+S
Sbjct: 468 SLQF----DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDN--ILVSGNA 521
Query: 209 DKVVNLWDLRDYSCKLTV--PTYEMVEAVC 236
D V +WD++ C T+ P+ C
Sbjct: 522 DSTVKIWDIKTGQCLQTLQGPSKHQSAVTC 551
Score = 202 (76.2 bits), Expect = 1.1e-12, P = 1.1e-12
Identities = 56/194 (28%), Positives = 89/194 (45%)
Query: 457 LVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDR 516
+VSGS D T++VW D E L V+ H + V + V +G+ D
Sbjct: 396 VVSGSRDATLRVW-------DIETGQCLH---VLMGHVAAVR--CVQYDGRRVVSGAYDF 443
Query: 517 TACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLKTFEG 576
VW + T +GH ++S++F + V++ S D +I++W + G+C+ T G
Sbjct: 444 MVKVWDPETETCLHTLQGHTNRVYSLQFDGIH--VVSGSLDTSIRVWDVETGNCIHTLTG 501
Query: 577 HTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYD---KHEDKIWALAVGKKTE 633
H S L + + +VS AD VK+W ++TG+C+ T KH+ + L K
Sbjct: 502 HQS--LTSGMELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPSKHQSAVTCLQFNKN-- 557
Query: 634 MFATGGSDALVNLW 647
T D V LW
Sbjct: 558 FVITSSDDGTVKLW 571
Score = 201 (75.8 bits), Expect = 1.5e-12, P = 1.5e-12
Identities = 46/152 (30%), Positives = 78/152 (51%)
Query: 71 DDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGA-DRKVLVW 129
D + + S + ++VWD T CL + +GH + G+ +G+ D + VW
Sbjct: 432 DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFD---GIHVVSGSLDTSIRVW 488
Query: 130 DVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATLD---K 186
DV+ G C H GH+ + S + + ++L SG+ D+TV++WD+ +C+ TL K
Sbjct: 489 DVETGNCIHTLTGHQSLTSGM----ELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPSK 544
Query: 187 HFSRVTSMAITSDGSTLISAGRDKVVNLWDLR 218
H S VT + + +I++ D V LWDL+
Sbjct: 545 HQSAVTCLQFNKN--FVITSSDDGTVKLWDLK 574
Score = 198 (74.8 bits), Expect = 3.1e-12, P = 3.1e-12
Identities = 47/169 (27%), Positives = 82/169 (48%)
Query: 484 LKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVE 543
L++ V+ H + + + +V +GS D T VW + T GH G+WS +
Sbjct: 292 LRSPKVLKGHDDHVITCLQFCGNRIV-SGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQ 350
Query: 544 FSPVDQVVITASGDKTIKIWSISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVK 603
D ++I+ S D+T+K+W+ G C+ T GHTS+V R L ++VS D ++
Sbjct: 351 MR--DNIIISGSTDRTLKVWNAETGECIHTLYGHTSTV-RCMHLHE-KRVVSGSRDATLR 406
Query: 604 LWTVRTGECIATYDKHEDKIWALAV-GKKTEMFATGGSDALVNLWHDST 651
+W + TG+C+ H + + G++ +G D +V +W T
Sbjct: 407 VWDIETGQCLHVLMGHVAAVRCVQYDGRRV---VSGAYDFMVKVWDPET 452
Score = 198 (74.8 bits), Expect = 3.1e-12, P = 3.1e-12
Identities = 51/172 (29%), Positives = 81/172 (47%)
Query: 56 IEGGSD-TITALALSPDDKLLFSSGHSREIRVWDLSTLKCLRSWKGHDGPAIGMACHPSG 114
++G D IT L + + S ++VW T KCLR+ GH G +
Sbjct: 298 LKGHDDHVITCLQFCGNR--IVSGSDDNTLKVWSAVTGKCLRTLVGHTGGV--WSSQMRD 353
Query: 115 GLLATAGADRKVLVWDVDGGFCTHYFKGHKGVVSSILFHPDTDKSLLFSGSDDATVRVWD 174
++ + DR + VW+ + G C H GH V + H +K ++ SGS DAT+RVWD
Sbjct: 354 NIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLH---EKRVV-SGSRDATLRVWD 409
Query: 175 LLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTV 226
+ +C+ L H + V + DG ++S D +V +WD +C T+
Sbjct: 410 IETGQCLHVLMGHVAAVR--CVQYDGRRVVSGAYDFMVKVWDPETETCLHTL 459
Score = 176 (67.0 bits), Expect = 7.8e-10, P = 7.8e-10
Identities = 40/147 (27%), Positives = 70/147 (47%)
Query: 505 NDSLVCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKTIKIWS 564
++ V +GS+D T VW + + GH + V++ + V++ + D +K+W
Sbjct: 392 HEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYD--GRRVVSGAYDFMVKVWD 449
Query: 565 ISDGSCLKTFEGHTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECIATYDKHEDKIW 624
+CL T +GHT+ V F G +VS D +++W V TG CI T H+
Sbjct: 450 PETETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTS 507
Query: 625 ALAVGKKTEMFATGGSDALVNLWHDST 651
+ + K + +G +D+ V +W T
Sbjct: 508 GMEL--KDNILVSGNADSTVKIWDIKT 532
Score = 170 (64.9 bits), Expect = 3.5e-09, P = 3.5e-09
Identities = 55/177 (31%), Positives = 82/177 (46%)
Query: 441 MGAVGAVAFSKKLQNFLVSGSSDHTIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSL 500
MG V AV + +VSG+ D +KVW D E L + H + SL
Sbjct: 420 MGHVAAVRCVQYDGRRVVSGAYDFMVKVW-------DPETETCLHT---LQGHTNRVYSL 469
Query: 501 AVAPNDSL-VCTGSQDRTACVWRLPDLVSVVTFRGHKRGIWSVEFSPVDQVVITASGDKT 559
D + V +GS D + VW + + T GH+ +E D ++++ + D T
Sbjct: 470 QF---DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELK--DNILVSGNADST 524
Query: 560 IKIWSISDGSCLKTFEG---HTSSVLRASFLTRGAQIVSCGADGLVKLWTVRTGECI 613
+KIW I G CL+T +G H S+V F +++ DG VKLW ++TGE I
Sbjct: 525 VKIWDIKTGQCLQTLQGPSKHQSAVTCLQFNKNF--VITSSDDGTVKLWDLKTGEFI 579
Score = 160 (61.4 bits), Expect = 4.3e-08, P = 4.3e-08
Identities = 42/162 (25%), Positives = 74/162 (45%)
Query: 27 VSSDGSFIACACGE-SINIVDLSNASIKSTIEGGSDTITALALSPDDKLLFSSGHSREIR 85
V DG + + + + D + T++G ++ + +L D + S IR
Sbjct: 429 VQYDGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIR 486
Query: 86 VWDLSTLKCLRSWKGHDGPAIGMACHPSGGLLATAGADRKVLVWDVDGGFCTHYFKG--- 142
VWD+ T C+ + GH GM + +L + AD V +WD+ G C +G
Sbjct: 487 VWDVETGNCIHTLTGHQSLTSGMELKDN--ILVSGNADSTVKIWDIKTGQCLQTLQGPSK 544
Query: 143 HKGVVSSILFHPDTDKSLLFSGSDDATVRVWDLLAKKCVATL 184
H+ V+ + F+ K+ + + SDD TV++WDL + + L
Sbjct: 545 HQSAVTCLQFN----KNFVITSSDDGTVKLWDLKTGEFIRNL 582
Score = 144 (55.7 bits), Expect = 2.4e-06, P = 2.4e-06
Identities = 44/171 (25%), Positives = 82/171 (47%)
Query: 405 CALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTGHMGAVGAVAFSKKLQNFLVSGSSDH 464
C G+ +V+G+ D V++WD E+ C+ GH V ++ F +VSGS D
Sbjct: 428 CVQYDGR-RVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFDGI---HVVSGSLDT 483
Query: 465 TIKVWSFDGLSDDAEQPMNLKAKAVVAAHGKDINSLAVAPNDSLVCTGSQDRTACVWRLP 524
+I+VW D E + + H + + S + D+++ +G+ D T +W +
Sbjct: 484 SIRVW-------DVETGNCIHT---LTGH-QSLTS-GMELKDNILVSGNADSTVKIWDIK 531
Query: 525 DLVSVVTFRG---HKRGIWSVEFSPVDQVVITASGDKTIKIWSISDGSCLK 572
+ T +G H+ + ++F+ VIT+S D T+K+W + G ++
Sbjct: 532 TGQCLQTLQGPSKHQSAVTCLQFNK--NFVITSSDDGTVKLWDLKTGEFIR 580
Score = 140 (54.3 bits), Expect = 6.5e-06, P = 6.5e-06
Identities = 71/313 (22%), Positives = 135/313 (43%)
Query: 167 DATVRVWDLLAKKCVATLDKHFSRVTSMAITSDGSTLISAGRDKVVNLWDLRDYSCKLTV 226
D R +L + K + D H +T + G+ ++S D + +W C T
Sbjct: 284 DTNWRRGELRSPKVLKGHDDHV--ITCLQFC--GNRIVSGSDDNTLKVWSAVTGKCLRT- 338
Query: 227 PTYEMVEAVCAIPPGSAFDSFL-SSYNQQTIKK-KRRSLE-IHFITVGERGIVRMWNADS 283
+V + D+ + S +T+K + E IH + G VR +
Sbjct: 339 ----LVGHTGGVWSSQMRDNIIISGSTDRTLKVWNAETGECIHTL-YGHTSTVRCMHLHE 393
Query: 284 ACLYEQKSSDVTISFEMDDSKRGFTAATVLPSNQGLLCVTADQQLLL---YT-TVEVPEK 339
+ S D T+ + D + G ++ + CV D + ++ Y V+V +
Sbjct: 394 KRVVSG-SRDATL--RVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDP 450
Query: 340 KMELILSKRLVGYNEEILDLKFLGEEEQYLAVATNIEQVQVYDLSSMSCSYVLAGHSEIV 399
+ E L L G+ + L+F G ++ T+I +V+D+ + +C + L GH +
Sbjct: 451 ETETCLHT-LQGHTNRVYSLQFDGIHVVSGSLDTSI---RVWDVETGNCIHTLTGHQSL- 505
Query: 400 LCLDTCALSSGKILIVTGSKDNSVRLWDSESRCCVGVGTG---HMGAVGAVAFSKKLQNF 456
T + ++V+G+ D++V++WD ++ C+ G H AV + F+K NF
Sbjct: 506 ----TSGMELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPSKHQSAVTCLQFNK---NF 558
Query: 457 LVSGSSDHTIKVW 469
+++ S D T+K+W
Sbjct: 559 VITSSDDGTVKLW 571
WARNING: HSPs involving 1579 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.319 0.133 0.403 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 706 692 0.00081 121 3 11 22 0.39 34
36 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 1829
No. of states in DFA: 619 (66 KB)
Total size of DFA: 383 KB (2185 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 58.19u 0.14s 58.33t Elapsed: 00:00:03
Total cpu time: 58.44u 0.14s 58.58t Elapsed: 00:00:03
Start: Tue May 21 05:17:53 2013 End: Tue May 21 05:17:56 2013
WARNINGS ISSUED: 2