Query 005255
Match_columns 706
No_of_seqs 402 out of 2023
Neff 6.4
Searched_HMMs 46136
Date Thu Mar 28 20:34:29 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/005255.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/005255hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG2194 Aminopeptidases of the 100.0 5E-106 1E-110 917.5 46.5 618 34-702 4-626 (834)
2 PRK10199 alkaline phosphatase 100.0 7.4E-28 1.6E-32 258.3 28.4 261 86-367 30-345 (346)
3 PF04389 Peptidase_M28: Peptid 100.0 2.3E-29 4.9E-34 247.9 8.5 170 180-350 1-179 (179)
4 KOG2195 Transferrin receptor a 99.9 3.2E-22 6.8E-27 231.2 16.7 206 158-373 334-553 (702)
5 KOG3946 Glutaminyl cyclase [Po 99.8 2.9E-18 6.2E-23 174.9 20.1 249 82-362 46-334 (338)
6 COG2234 Iap Predicted aminopep 99.7 1.5E-17 3.3E-22 186.1 12.3 191 161-362 183-392 (435)
7 TIGR03176 AllC allantoate amid 99.6 2.9E-14 6.2E-19 158.8 15.3 127 87-247 3-141 (406)
8 PRK12890 allantoate amidohydro 99.5 3.4E-13 7.4E-18 150.3 16.5 128 85-246 7-145 (414)
9 PRK09133 hypothetical protein; 99.5 5.6E-13 1.2E-17 151.1 18.0 151 82-261 32-203 (472)
10 PRK12891 allantoate amidohydro 99.5 4.6E-13 9.9E-18 149.4 16.1 129 83-245 6-146 (414)
11 PRK08262 hypothetical protein; 99.5 6.1E-13 1.3E-17 151.3 16.7 170 43-246 2-201 (486)
12 TIGR01879 hydantase amidase, h 99.5 7.1E-13 1.5E-17 147.3 15.7 126 88-247 2-139 (401)
13 PRK13590 putative bifunctional 99.5 6.8E-13 1.5E-17 154.4 15.3 128 85-245 179-321 (591)
14 PRK09290 allantoate amidohydro 99.4 1.4E-12 3E-17 145.4 16.6 130 84-247 4-145 (413)
15 PRK13799 unknown domain/N-carb 99.4 7.6E-13 1.7E-17 153.9 14.6 127 85-245 179-321 (591)
16 PRK06133 glutamate carboxypept 99.4 3.3E-12 7.2E-17 142.4 18.2 146 85-263 35-198 (410)
17 PRK12892 allantoate amidohydro 99.4 2.8E-12 6.1E-17 142.6 16.4 130 83-247 6-146 (412)
18 PRK07473 carboxypeptidase; Pro 99.4 5.5E-12 1.2E-16 139.2 18.2 149 84-263 8-174 (376)
19 PRK12893 allantoate amidohydro 99.4 2.9E-12 6.4E-17 142.6 16.0 130 84-247 7-148 (412)
20 PRK08596 acetylornithine deace 99.4 5.4E-12 1.2E-16 141.1 18.0 144 87-262 13-178 (421)
21 TIGR01910 DapE-ArgE acetylorni 99.4 7.2E-12 1.6E-16 137.7 15.9 146 91-263 2-168 (375)
22 PRK08588 succinyl-diaminopimel 99.4 7.5E-12 1.6E-16 137.5 16.0 140 86-261 1-161 (377)
23 PRK07338 hypothetical protein; 99.3 1.7E-11 3.6E-16 136.0 16.7 157 86-262 16-190 (402)
24 PRK07906 hypothetical protein; 99.3 8.9E-12 1.9E-16 139.4 14.6 130 90-248 2-155 (426)
25 PRK06446 hypothetical protein; 99.3 2.1E-11 4.6E-16 137.0 15.9 129 87-248 2-151 (436)
26 PRK07907 hypothetical protein; 99.3 3.6E-11 7.8E-16 135.6 17.4 146 85-263 16-185 (449)
27 PRK09104 hypothetical protein; 99.3 3.4E-11 7.4E-16 136.3 17.0 147 85-261 15-190 (464)
28 TIGR01893 aa-his-dipept aminoa 99.3 2.5E-11 5.4E-16 138.0 15.6 137 86-263 3-166 (477)
29 PRK13013 succinyl-diaminopimel 99.3 5E-11 1.1E-15 133.2 17.8 153 86-262 13-188 (427)
30 TIGR01880 Ac-peptdase-euk N-ac 99.3 3.9E-11 8.5E-16 133.1 16.3 147 83-260 5-173 (400)
31 PRK04443 acetyl-lysine deacety 99.3 3.7E-11 8E-16 131.0 15.3 134 85-263 4-149 (348)
32 PRK13983 diaminopimelate amino 99.3 8.3E-11 1.8E-15 129.9 17.6 151 87-260 5-180 (400)
33 PRK08201 hypothetical protein; 99.3 7.1E-11 1.5E-15 133.4 16.9 148 85-262 12-183 (456)
34 PRK07079 hypothetical protein; 99.3 8.1E-11 1.8E-15 133.5 16.2 149 84-261 14-190 (469)
35 PF09940 DUF2172: Domain of un 99.2 1.2E-10 2.7E-15 125.0 16.1 242 83-366 56-308 (386)
36 KOG2275 Aminoacylase ACY1 and 99.2 8.7E-11 1.9E-15 127.1 14.6 123 111-263 49-193 (420)
37 PF05450 Nicastrin: Nicastrin; 99.2 1.6E-10 3.4E-15 119.4 15.8 167 180-346 1-200 (234)
38 PRK05469 peptidase T; Provisio 99.2 1.2E-10 2.6E-15 129.7 15.6 126 87-244 2-184 (408)
39 PRK13007 succinyl-diaminopimel 99.2 1.5E-10 3.3E-15 125.8 16.1 133 87-262 7-156 (352)
40 PRK15026 aminoacyl-histidine d 99.2 1.7E-10 3.7E-15 131.4 17.1 139 83-262 6-171 (485)
41 TIGR01883 PepT-like peptidase 99.2 1.2E-10 2.7E-15 127.0 15.3 128 88-246 1-146 (361)
42 PRK06837 acetylornithine deace 99.2 1.7E-10 3.7E-15 129.3 16.5 146 85-245 18-184 (427)
43 COG4882 Predicted aminopeptida 99.2 1.5E-10 3.3E-15 122.3 14.5 170 162-365 178-359 (486)
44 PRK06915 acetylornithine deace 99.2 2.5E-10 5.4E-15 127.5 17.1 157 86-261 16-193 (422)
45 PRK13381 peptidase T; Provisio 99.2 1.9E-10 4.1E-15 127.9 16.0 125 89-246 3-184 (404)
46 PRK07522 acetylornithine deace 99.2 2.1E-10 4.5E-15 126.3 15.8 142 87-262 4-166 (385)
47 PRK07318 dipeptidase PepV; Rev 99.2 1.6E-10 3.5E-15 131.0 15.2 127 86-248 13-167 (466)
48 COG1363 FrvX Cellulase M and r 99.2 1.6E-09 3.6E-14 117.5 21.9 225 87-365 2-348 (355)
49 PRK08652 acetylornithine deace 99.2 2E-10 4.4E-15 124.4 14.7 131 87-262 2-144 (347)
50 PRK00466 acetyl-lysine deacety 99.2 2.5E-10 5.3E-15 124.4 15.3 128 87-263 10-149 (346)
51 PRK07205 hypothetical protein; 99.2 2.8E-10 6.1E-15 128.2 16.3 128 85-247 9-164 (444)
52 TIGR01892 AcOrn-deacetyl acety 99.2 2.8E-10 6.1E-15 124.1 15.4 124 92-248 2-145 (364)
53 PRK08651 succinyl-diaminopimel 99.2 5.1E-10 1.1E-14 123.7 16.2 150 85-263 4-173 (394)
54 PRK05111 acetylornithine deace 99.2 6.1E-10 1.3E-14 122.6 16.6 129 86-247 4-157 (383)
55 TIGR01882 peptidase-T peptidas 99.2 4.4E-10 9.6E-15 125.4 15.3 128 87-245 3-187 (410)
56 PRK06156 hypothetical protein; 99.1 1.2E-09 2.6E-14 125.7 19.0 138 85-261 44-213 (520)
57 PRK08554 peptidase; Reviewed 99.1 7E-10 1.5E-14 125.0 16.1 141 88-263 2-166 (438)
58 PRK13009 succinyl-diaminopimel 99.1 6.2E-10 1.4E-14 122.1 15.1 137 88-260 3-162 (375)
59 TIGR03106 trio_M42_hydro hydro 99.1 5.2E-09 1.1E-13 114.2 21.4 147 197-360 181-339 (343)
60 COG0624 ArgE Acetylornithine d 99.1 8.3E-10 1.8E-14 122.8 15.5 145 87-261 13-180 (409)
61 PF01546 Peptidase_M20: Peptid 99.1 5E-10 1.1E-14 110.3 11.2 165 183-361 1-188 (189)
62 TIGR01886 dipeptidase dipeptid 99.1 8.4E-10 1.8E-14 125.3 14.3 126 87-248 13-166 (466)
63 PRK13004 peptidase; Reviewed 99.1 2E-09 4.3E-14 119.6 16.1 123 86-246 14-158 (399)
64 TIGR01902 dapE-lys-deAc N-acet 99.1 1.4E-09 3E-14 118.0 14.0 125 92-263 2-138 (336)
65 TIGR01900 dapE-gram_pos succin 99.1 1.9E-09 4.1E-14 118.9 14.8 135 93-263 2-171 (373)
66 PRK09961 exoaminopeptidase; Pr 99.1 1.1E-08 2.4E-13 111.8 20.4 219 91-363 4-333 (344)
67 TIGR03107 glu_aminopep glutamy 99.1 1.2E-08 2.5E-13 111.6 20.4 149 197-363 176-341 (350)
68 TIGR01246 dapE_proteo succinyl 99.0 2.4E-09 5.1E-14 117.5 14.9 136 90-261 2-160 (370)
69 KOG2526 Predicted aminopeptida 99.0 9.7E-09 2.1E-13 110.9 17.7 197 161-362 192-416 (555)
70 TIGR01887 dipeptidaselike dipe 99.0 3.7E-09 8E-14 119.4 14.4 124 87-246 2-153 (447)
71 TIGR01891 amidohydrolases amid 98.9 1.3E-08 2.7E-13 111.7 15.6 132 91-262 3-151 (363)
72 TIGR03320 ygeY M20/DapE family 98.9 1.4E-08 3E-13 112.7 15.4 121 87-245 13-155 (395)
73 PRK08737 acetylornithine deace 98.9 1.1E-08 2.5E-13 112.5 14.3 131 86-262 5-156 (364)
74 TIGR03526 selenium_YgeY putati 98.9 1.9E-08 4.1E-13 111.6 15.9 122 87-246 13-156 (395)
75 PRK09864 putative peptidase; P 98.9 7.9E-08 1.7E-12 105.1 20.1 149 197-363 173-341 (356)
76 PLN02693 IAA-amino acid hydrol 98.7 2.2E-07 4.7E-12 104.9 15.7 120 89-246 49-182 (437)
77 PLN02280 IAA-amino acid hydrol 98.7 3.7E-07 8E-12 104.1 16.5 124 88-246 94-232 (478)
78 COG4187 RocB Arginine degradat 98.7 1.1E-07 2.4E-12 103.4 10.7 159 83-265 4-210 (553)
79 COG4310 Uncharacterized protei 98.6 4.6E-07 1E-11 94.7 11.5 175 178-366 177-356 (435)
80 KOG2276 Metalloexopeptidases [ 98.2 1.6E-05 3.5E-10 86.3 13.3 142 85-246 14-179 (473)
81 PF05343 Peptidase_M42: M42 gl 98.1 7.4E-06 1.6E-10 87.7 8.8 133 197-342 132-282 (292)
82 KOG2657 Transmembrane glycopro 97.6 0.00048 1E-08 76.9 11.5 189 161-351 156-376 (596)
83 COG2195 PepD Di- and tripeptid 97.0 0.0012 2.6E-08 73.8 7.1 60 198-260 143-203 (414)
84 PF04114 Gaa1: Gaa1-like, GPI 96.6 0.037 8.1E-07 63.8 15.4 185 161-367 2-229 (504)
85 COG1473 AbgB Metal-dependent a 96.3 0.077 1.7E-06 59.3 15.0 129 99-261 21-164 (392)
86 PRK02813 putative aminopeptida 91.5 0.7 1.5E-05 52.4 8.8 146 195-349 230-417 (428)
87 PTZ00371 aspartyl aminopeptida 91.2 1.6 3.5E-05 50.0 11.5 153 195-351 247-446 (465)
88 PRK02256 putative aminopeptida 85.3 1.3 2.8E-05 50.8 5.5 57 182-244 245-301 (462)
89 KOG3566 Glycosylphosphatidylin 74.2 19 0.00041 42.0 9.9 93 161-264 119-228 (617)
90 PF06781 UPF0233: Uncharacteri 60.5 18 0.00039 32.0 5.0 30 40-69 27-56 (87)
91 PF10190 Tmemb_170: Putative t 50.6 1.8E+02 0.0038 26.8 9.8 49 421-470 32-80 (105)
92 PF12911 OppC_N: N-terminal TM 45.1 24 0.00053 27.8 3.1 38 651-688 8-45 (56)
93 PRK08651 succinyl-diaminopimel 40.5 60 0.0013 35.8 6.4 56 306-366 338-393 (394)
94 PRK08596 acetylornithine deace 37.5 64 0.0014 36.2 6.1 57 306-367 363-419 (421)
95 PRK08126 hypothetical protein; 33.9 7.7E+02 0.017 28.2 16.6 53 181-234 355-409 (432)
96 PRK07522 acetylornithine deace 33.0 1.2E+02 0.0025 33.4 7.2 74 276-364 311-384 (385)
97 PF07466 DUF1517: Protein of u 31.7 6.9E+02 0.015 27.0 17.5 48 204-251 240-287 (289)
98 PRK00159 putative septation in 30.6 85 0.0018 27.9 4.3 27 41-67 28-54 (87)
99 PRK07338 hypothetical protein; 28.5 93 0.002 34.5 5.5 55 306-366 345-400 (402)
100 PRK06133 glutamate carboxypept 27.1 81 0.0017 35.3 4.7 57 306-366 353-409 (410)
101 TIGR01880 Ac-peptdase-euk N-ac 25.5 1.2E+02 0.0027 33.5 5.8 56 306-365 343-399 (400)
102 PF05421 DUF751: Protein of un 24.7 2.9E+02 0.0064 22.9 6.2 28 638-665 14-41 (61)
103 PRK07033 hypothetical protein; 24.5 1.1E+03 0.024 27.0 16.9 54 180-234 345-400 (427)
104 PRK09804 putative cryptic C4-d 22.3 4.2E+02 0.0092 30.6 9.1 56 585-649 118-175 (455)
105 PRK13009 succinyl-diaminopimel 22.2 1.6E+02 0.0034 32.2 5.8 53 306-364 322-374 (375)
106 PF10337 DUF2422: Protein of u 20.9 1.3E+03 0.027 26.4 14.1 33 584-616 186-218 (459)
107 PRK13983 diaminopimelate amino 20.7 2.3E+02 0.0049 31.1 6.7 51 306-362 349-399 (400)
108 PRK02251 putative septation in 20.0 1.7E+02 0.0036 26.0 4.2 26 41-66 29-54 (87)
No 1
>KOG2194 consensus Aminopeptidases of the M20 family [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=100.00 E-value=5.4e-106 Score=917.50 Aligned_cols=618 Identities=34% Similarity=0.582 Sum_probs=534.0
Q ss_pred CCccccchhhhHHHHHHHHHHHHHHHHHhhhhhcccCCCCCc--ccccCCCCCCHHHHHHHHHHHHcCCCCCCCCHHHH-
Q 005255 34 DSIHVSSAKRSGLVWTVVFATLICASYGVYYYQYEHMPPPLT--AEQAGRRGFSELEAMKHVKALTQLGPHAVGSDALD- 110 (706)
Q Consensus 34 ~~~~~~~~~r~~~~~l~~~ll~~~~~~~v~~~~~~~lP~~~~--~~~a~~~~fs~erA~~~L~~L~~igpR~~gS~~~~- 110 (706)
+++...+++|....++..+..++...+.+ +.+.++|.|++ .++..+++|+++||++++.+++++|||++||++|+
T Consensus 4 ~~~~~~~~~r~~~~~~~~~~f~~~~~~~~--~~~~~~~~pl~~~~e~~~~~~f~~~rA~~~l~~ls~~G~~~~gS~~ne~ 81 (834)
T KOG2194|consen 4 DKSFRRKRKRNGAPCLAHLIFLLSIAIVL--YLFDHLPEPLTQPQEQTLPSQFSEARALKDLLSLSAAGPHPVGSDNNEM 81 (834)
T ss_pred hhHhhhhhhhccchHHHHHHHHHHHHHHH--HHHhhccccCCCcchhcCchhhHHHHHHHHHHHHHhcCCcccCchhhHH
Confidence 44455666676666666555555444333 34455555554 44455789999999999999999999999999998
Q ss_pred HHHHHHHHHHHhhccccCCc-ceEEEEeeeccCCCcccccccccCccccccccceEEEEEcCCCCCCCCCCeEEEeeccc
Q 005255 111 RALQYVLAASQKIKESKHWE-ADVEVDFFHAKSGANRVGTGVFKGKTLIYSDLNHIVLRILPKYASEAGENAILVSSHID 189 (706)
Q Consensus 111 ~a~~yL~~~l~~ig~~~~~~-~~vevd~f~~~~g~~~~~g~~~~~~~~~y~~~~NVi~~i~g~~~~~~~~~~Vll~aH~D 189 (706)
.+++|+++++++++.+++.+ .++|+|.+... |. + ..++++.+|++.+||++++.||++ .++.+++++||+|
T Consensus 82 ~a~~~il~e~~~i~~~~~~~~~~~Evd~q~~s-g~-~----~~~~~~~~Y~~i~NIvVki~~k~~--~~~~~lLlnaHfD 153 (834)
T KOG2194|consen 82 HASSFILKEVNKIRKGSQSDLYDMEVDLQSAS-GS-F----ILEGMTLVYQNISNIVVKISPKNG--NDKNALLLNAHFD 153 (834)
T ss_pred HHHHHHHHHHHHHHhhhhcchhhheeceeecc-ce-e----eehhhhheeeeeeeEEEecCCCCC--Cccceeeeecccc
Confidence 99999999999999877653 45677654432 11 0 125788999999999999999842 3446999999999
Q ss_pred ccCCCCCCCCChhHHHHHHHHHHHHHhcCCCCCCcEEEEEeCCCCCCCcChHHHHhcCCccCCceEEEEeecCcCCCCcc
Q 005255 190 TVSAGEGAGDCSSCVAVMLELARVMSQWAHEFKNAVIFLFNTGEEEGLNGAHSFVTQHPWSTTIRVAVDLEAMGIGGRSA 269 (706)
Q Consensus 190 Sv~~~pGA~Dd~sgva~~LE~ar~L~~~~~~p~~~I~flf~~~EE~gl~GS~~f~~~~~~~~~v~a~iNLD~~G~gg~~~ 269 (706)
|||.+|||+||++|||+|||++|.+.+.....+|+|+|+||++||.+++|||+|++||||+++++++||||++|+||++.
T Consensus 154 Svpt~~gAtDDg~~va~mLe~lRv~s~~~~~l~~~vVFLfNgaEE~~L~gsH~FItQH~w~~~~ka~INLea~GsGGrei 233 (834)
T KOG2194|consen 154 SVPTGPGATDDGSGVASMLEALRVLSKSDKLLTHSVVFLFNGAEESGLLGSHAFITQHPWSKNIKAVINLEAAGSGGREI 233 (834)
T ss_pred ccCCCCCCCcchhHHHHHHHHHHHhhcCCCcccccEEEEecCcccchhhhcccceecChhhhhhheEEeccccCccccee
Confidence 99999999999999999999999999987778999999999999999999999999999999999999999999999999
Q ss_pred ccccCCCHHHHHHHHHHccCCCCcccccccccCCCCCCCCchHHHhhcCCCeEEEEEeecCCCCCCCcCCCcCCCCHHHH
Q 005255 270 LFQAGPNLWAVENFAAVAKYPSGQIIGQDLFASGVFETATDFQVYTEVAGLSGLDFAYTDKSAVYHTKNDRLDLLKPGSL 349 (706)
Q Consensus 270 lfq~g~~~~li~~y~~~a~~p~~~~l~~e~f~~g~ips~TD~~~F~~~~GiPgld~a~~~~~~~YHT~~Dt~d~id~~sL 349 (706)
+||+||++|+++.|.++++||+++++++|+||+|+|||+|||++|++|+|+||+|+|+..|++.|||++|.++++.++++
T Consensus 234 LFQagp~~wl~k~Y~~~~phPf~stlgee~Fq~g~IpSdTDfrif~eyg~l~GLD~A~~~Ng~vYHTk~D~~~~i~~gs~ 313 (834)
T KOG2194|consen 234 LFQAGPNHWLLKAYLQAAPHPFASTLGEELFQSGIIPSDTDFRIFREYGHLPGLDMAFVKNGYVYHTKYDGIQYIPPGSL 313 (834)
T ss_pred EEecCCchHHHHHHHhhCCCchhhhhHHHhhhcCcCccccchHHHHHhCCcccceeeeeeccceEEeecccccccCcchh
Confidence 99999977999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCCCCccccCCccCCCeEEecccCceEEEeechhHHHHHHHHHHHHHHHHHHHHHhcchh
Q 005255 350 QHLGENMLDFLLQTASSTSIPKGNAVEEEGKTVHETGVYFDILGKYMVLYHQHFANMLHNSVILQSLLIWTASLVMGGYP 429 (706)
Q Consensus 350 q~~g~~~l~ll~~la~~~~l~~~~~~~~~~~~~~~~~VyFd~lg~~~v~y~~~~~~~l~~~v~~~~~~~~~~~~~~~~~~ 429 (706)
||+|+|++++++.++|+ ++.+ .++.+++ +||||++|++|+.|+++++++||+. +.+.++ ....+.+.+
T Consensus 314 q~tGen~L~~v~~lan~-el~~------~~~~~~g-~vyfdv~g~~~~~y~~~~~~iLNi~---i~~~i~-l~~~~~g~~ 381 (834)
T KOG2194|consen 314 QHTGENILALVRSLANS-ELDN------STERSKG-TVYFDVVGKYFLAYSESTGVILNIT---ICISIW-LMSLRSGSS 381 (834)
T ss_pred hhhhhHHHHHHHHHhch-hhcc------ccccCCC-ceehhhhhhhhheeehhhhhhhhhh---hhhhhh-hhhhcccch
Confidence 99999999999999998 5432 3445666 9999999999999999999999933 222233 233444444
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccccchhHHHHhhhHHHHHHHHHHHHHHHHHHHHHhhhhccC
Q 005255 430 AAVSLALTCLSAILMLVLSISFSVVIAFILPQISSSPVPYVASPWLTVGLFAAPAFLGALTGQHLGYIVLKAYLANQYSK 509 (706)
Q Consensus 430 ~~~~~~~~~~~~~~~~~~~~~~~~~vA~~~~~~~~~~~sw~s~~~l~~gLy~~p~~~g~~~~~~~~~~~~~~~~~~~~~~ 509 (706)
.++++.+.|+.+++++++++++++++|++++.+ +.+|+||++||+++|||.||+++|+.+++.++....++ +
T Consensus 382 ~~~~f~~~~~~~i~s~~~~~~l~~~~a~~l~~v-~l~~sw~s~p~l~~~ly~~p~~~gl~~~~~~y~~~~~~-------~ 453 (834)
T KOG2194|consen 382 QLGKFILACLLQILSIVVAIGLPVLVALFLDWV-GLPLSWFSNPWLLLGLYYLPSLFGLAILQALYAKRSKR-------H 453 (834)
T ss_pred hhhhHHHHHHHHHHHHHHHHhhHHHHHHHhhcc-cccceeecchHHHHHHHHhHHHHHhhHHHHHHHhhccc-------c
Confidence 688999999999999999999999999999988 45999999999999999999999999999874221111 1
Q ss_pred CCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHHHhhccCcCCCchHHHHHH
Q 005255 510 GMQLSPVHQAALVKLEAERWLFKSGFLQWLILLALGNYYKIGSTYMALVWLVPPAFAYGFLEATLTPVRLTRPLKLATLL 589 (706)
Q Consensus 510 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~t~~~i~S~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 589 (706)
+ +...+.+++++|+ +|+++++++|++||||+|++++|.++++++ .+++.....+.++..|..+++
T Consensus 454 ~----------~~~~~~~ql~~h~---~l~~l~~~~t~y~I~S~y~~~~~~~~~v~~--~~~~~~~~l~~~~~~~~~~~~ 518 (834)
T KOG2194|consen 454 S----------LEYLQHDQLLLHS---LLSILLIIMTYYGIRSAYLPLLLLLFYVIS--YLLNTLTILHLCGTLYLITLL 518 (834)
T ss_pred c----------cchhhHHHHHHHH---HHHHHHHHheecccchhHHHHHHHHHHHHH--HHHhhceeeccCCceeeeeee
Confidence 1 1123557778886 778888999999999999999999999999 456677888889999999999
Q ss_pred HHhHHHHHHHHHHHHHHHHHHhccccccCCCCCCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHH
Q 005255 590 LGLAVPVLVSAGNIIRLANVLVATLVRFDRNPGGTPEWLGNVIFAVVIAVVSCLTLVYLLSYVHLSGAKGPIAFASFILV 669 (706)
Q Consensus 590 ~~~~~p~~~~~~~~~~~~~~~~p~~gr~~~~~~~~P~~~~d~~ia~~~a~~~~l~~~~l~p~~~~~~~~~~i~~~l~~~~ 669 (706)
+||+.|+.+.+|.++.++.+|+|||||+|.+. ||| .+||.++++++.+.++|++|++|++|+++.|+.+++.++
T Consensus 519 i~~~~p~~~~ay~~~~~~~~fipm~Gr~g~~~--nPd----~~i~~~~~~~~~l~~~f~i~l~~~fr~~~~i~~~l~~I~ 592 (834)
T KOG2194|consen 519 ICQVGPFLFAAYSTYSLVRTFIPMMGRFGNAS--NPD----LSISFLNAFGANLIVGFLIPLVHLFRRSKSIILGLFGIT 592 (834)
T ss_pred eeehHhHHHHHHHHHHHHHeeeccccccCCCC--Cch----HHHHHHHHHHHHhhHHHHHHHHHHHcCCchhHHHHHHHH
Confidence 99999999999999999999999999999765 886 999999999999999999999999999999999999998
Q ss_pred HHHHHHHHcCCCCCCCCCC-ccceEEEEEeeeee
Q 005255 670 GLSIIMVSSGIIPPFSEET-ARAVNIHFRASTFQ 702 (706)
Q Consensus 670 ~~~~~~~~~~~~fPy~~~~-~~~~~~~~~~~~~~ 702 (706)
.+++.+++|+++|||++++ ++|+++.|..||||
T Consensus 593 ~~~~~i~~T~~~fPy~~~~~~~r~~~lH~~rtf~ 626 (834)
T KOG2194|consen 593 AVILIIASTSIGFPYRPKTTVQRVPVLHVRRTFY 626 (834)
T ss_pred HHHHHHHhcCCcCCccccccceeEEEEeccccee
Confidence 8888889999999999766 69999999999998
No 2
>PRK10199 alkaline phosphatase isozyme conversion aminopeptidase; Provisional
Probab=99.96 E-value=7.4e-28 Score=258.31 Aligned_cols=261 Identities=19% Similarity=0.250 Sum_probs=184.7
Q ss_pred HHHHHHHHHHHHc-CCCCCCCCHHHHHHHHHHHHHHHhhccccCCcceEEEEeeeccCCCcccccccccCccccccccce
Q 005255 86 ELEAMKHVKALTQ-LGPHAVGSDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYSDLNH 164 (706)
Q Consensus 86 ~erA~~~L~~L~~-igpR~~gS~~~~~a~~yL~~~l~~ig~~~~~~~~vevd~f~~~~g~~~~~g~~~~~~~~~y~~~~N 164 (706)
.+-|.+++++|+. +++|..||+++.++++||.++|+++|. +++.+.|..........+ ..........|
T Consensus 30 ~~~a~~~~~~ia~~~~gR~~gS~~E~~aA~yL~~~f~~lG~------~v~~q~f~~~~~~~~~~g----~~~~~~~~g~n 99 (346)
T PRK10199 30 GDFANTQARHIATFFPGRMTGSPAEMLSADYLRQQFQQMGY------QSDIRTFNSRYIYTARDN----RKNWHNVTGST 99 (346)
T ss_pred cchHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHCCC------ceEeeeccccceeecccc----cccccCCccce
Confidence 4566778888875 899999999999999999999999994 444443332100000000 00001124689
Q ss_pred EEEEEcCCCCCCCCCCeEEEeecccccCC--------------CCCCCCChhHHHHHHHHHHHHHhcCCCCCCcEEEEEe
Q 005255 165 IVLRILPKYASEAGENAILVSSHIDTVSA--------------GEGAGDCSSCVAVMLELARVMSQWAHEFKNAVIFLFN 230 (706)
Q Consensus 165 Vi~~i~g~~~~~~~~~~Vll~aH~DSv~~--------------~pGA~Dd~sgva~~LE~ar~L~~~~~~p~~~I~flf~ 230 (706)
||++++|+ .++.|+++||+|||+. .|||+||++|||+|||++|.|.+. +++++|+|+++
T Consensus 100 VIa~~~G~-----~~~~Ill~AH~DTV~p~~~~~~~~~~~g~~~~GA~DnasGvA~lLe~ar~l~~~--~~~~~I~fv~~ 172 (346)
T PRK10199 100 VIAAHEGK-----APQQIIIMAHLDTYAPQSDADVDANLGGLTLQGMDDNAAGLGVMLELAERLKNV--PTEYGIRFVAT 172 (346)
T ss_pred EEEEECCC-----CCCeEEEEEEcCcCCCCCCCccccCCCCcccCCccccHHHHHHHHHHHHHHhhC--CCCCcEEEEEE
Confidence 99999874 3468999999999852 379999999999999999999865 47889999999
Q ss_pred CCCCCCCcChHHHHhcCC--ccCCceEEEEeecCcCCCCccccccCC-CHHHH----HH-HHHHccCCCCccccc-----
Q 005255 231 TGEEEGLNGAHSFVTQHP--WSTTIRVAVDLEAMGIGGRSALFQAGP-NLWAV----EN-FAAVAKYPSGQIIGQ----- 297 (706)
Q Consensus 231 ~~EE~gl~GS~~f~~~~~--~~~~v~a~iNLD~~G~gg~~~lfq~g~-~~~li----~~-y~~~a~~p~~~~l~~----- 297 (706)
++||.|+.||+.|+++.+ ..+++.++||+|+++.+ ....+..|. +...+ +. ..+.+ ...|..+..
T Consensus 173 ~~EE~Gl~GS~~~~~~~~~~~~~~~~~~iNlD~~~~~-d~~~~~~g~~~~~~~~~~~~d~~~~~a-~~~g~~~~~~~~~~ 250 (346)
T PRK10199 173 SGEEEGKLGAENLLKRMSDTEKKNTLLVINLDNLIVG-DKLYFNSGVNTPEAVRKLTRDRALAIA-RRHGIAATTNPGLN 250 (346)
T ss_pred CCcccCcHHHHHHHHhcCccchhcEEEEEEeccCCCC-CceEEecCCCcHHHHhHHHHHHHHHHH-HHcCCccccCCCcc
Confidence 999999999999997654 34689999999999875 344455444 22211 11 11221 122322211
Q ss_pred ccccCCCCCCCCchHHHhhcCCCeEEEEEee-------------------cCCCCCC-CcCCCcCCCCH-------HHHH
Q 005255 298 DLFASGVFETATDFQVYTEVAGLSGLDFAYT-------------------DKSAVYH-TKNDRLDLLKP-------GSLQ 350 (706)
Q Consensus 298 e~f~~g~ips~TD~~~F~~~~GiPgld~a~~-------------------~~~~~YH-T~~Dt~d~id~-------~sLq 350 (706)
..|..| ....|||.+|.+ .|||.+.+... ..+..|| |.+|+.++++. ..+.
T Consensus 251 ~~~p~g-~~~rSDH~~F~~-~GIP~l~~~a~n~~~g~~d~~~q~~~~~~~~~g~~~h~~~~d~~~~l~~~~pgri~~~~~ 328 (346)
T PRK10199 251 KNYPKG-TGCCNDAEVFDK-AGIPVLSVEATNWNLGNKDGYQQRAKTAAFPAGNSWHDVRLDNQQHIDKALPGRIERRCR 328 (346)
T ss_pred ccccCC-CcCCcccHHHHh-cCCCeEEeeccccccCCcccceecccCccCCCCccccCcCcchHHHHHHhcchHHHHHHH
Confidence 123234 245799999999 99999988421 2345689 89999999886 5566
Q ss_pred HHHHHHHHHHHHHhcCC
Q 005255 351 HLGENMLDFLLQTASST 367 (706)
Q Consensus 351 ~~g~~~l~ll~~la~~~ 367 (706)
...+.++.++.+|++..
T Consensus 329 ~~~~~~~~~~~~~~~~~ 345 (346)
T PRK10199 329 DVVRIMLPLVKELAKAS 345 (346)
T ss_pred hHHHHHHHHHHHHhccC
Confidence 67889999999999864
No 3
>PF04389 Peptidase_M28: Peptidase family M28; InterPro: IPR007484 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This domain is found in metallopeptidases belonging to the MEROPS peptidase family M28 (aminopeptidase Y, clan MH) []. They also contain a transferrin receptor-like dimerisation domain (IPR007365 from INTERPRO) and a protease-associated PA domain (IPR003137 from INTERPRO).; GO: 0008233 peptidase activity, 0006508 proteolysis; PDB: 3BXM_A 2C6P_A 1Z8L_C 3SJF_A 3BHX_A 2C6G_A 3D7F_A 2XEG_A 3BI1_A 2C6C_A ....
Probab=99.96 E-value=2.3e-29 Score=247.88 Aligned_cols=170 Identities=31% Similarity=0.488 Sum_probs=130.2
Q ss_pred CeEEEeecccccC------CCCCCCCChhHHHHHHHHHHHHHhcCCCCCCcEEEEEeCCCCCCCcChHHHHhc-CCccCC
Q 005255 180 NAILVSSHIDTVS------AGEGAGDCSSCVAVMLELARVMSQWAHEFKNAVIFLFNTGEEEGLNGAHSFVTQ-HPWSTT 252 (706)
Q Consensus 180 ~~Vll~aH~DSv~------~~pGA~Dd~sgva~~LE~ar~L~~~~~~p~~~I~flf~~~EE~gl~GS~~f~~~-~~~~~~ 252 (706)
+.|+++|||||++ .++||+||++|||+|||+||.|.+.+.+++++|+|+|+++||.|+.||++|+++ +.+.++
T Consensus 1 e~ivi~aH~Ds~~~~~~~~~~~GA~DnasGva~lLelAr~l~~~~~~~~~~i~fv~~~~EE~gl~GS~~~~~~~~~~~~~ 80 (179)
T PF04389_consen 1 EYIVIGAHYDSVGGDADGSWSPGANDNASGVAALLELARVLKELKPQPKRTIRFVFFDGEEQGLLGSRAFVEHDHEELDN 80 (179)
T ss_dssp EEEEEEEE--BESCCC-TCSSS-TTTTHHHHHHHHHHHHHHHHSTHSSSEEEEEEEESSGGGTSHHHHHHHHHHHCHHHH
T ss_pred CEEEEEeecCCCCCcCCCcccCCcccchHHHHHHHHHHHHHHHhhcccCccEEEEEecccccCccchHHHHHhhhccccc
Confidence 3699999999988 899999999999999999999999777889999999999999999999999963 346689
Q ss_pred ceEEEEeecCcCCCCccccccCC-CHHHHHHHHHHccCCCCcccccccccCCCCCCCCchHHHhhcCCCeEEEEEeec-C
Q 005255 253 IRVAVDLEAMGIGGRSALFQAGP-NLWAVENFAAVAKYPSGQIIGQDLFASGVFETATDFQVYTEVAGLSGLDFAYTD-K 330 (706)
Q Consensus 253 v~a~iNLD~~G~gg~~~lfq~g~-~~~li~~y~~~a~~p~~~~l~~e~f~~g~ips~TD~~~F~~~~GiPgld~a~~~-~ 330 (706)
+.++||+|++|.+++....+..+ .++.++.+.+....+.+.....+.......+..+||.+|.. .|+|++.+.... .
T Consensus 81 ~~~~inlD~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sD~~~F~~-~gip~~~~~~~~~~ 159 (179)
T PF04389_consen 81 IAAVINLDMIGSGDPTVYSEGSPSLPSRLEAYLSSFKQPYGSSLGPDVPPEKPTFGGSDHYPFSK-AGIPAVTLSSTDGY 159 (179)
T ss_dssp EEEEEEECSSBSSSSEEEEEEGGGHHHHHHHHHHHHHHHHHCHTSSECEEEESSTTSSTCHHHHT-TT-EEEEEEESSSS
T ss_pred ceeEEeccccccCcccceeeeeccccchhhhhhhhhhhhhhcccccccccccCCCCCCCcHhhhc-CCEeEEEEEecCCC
Confidence 99999999999988877776554 23334443332222333222233332233456899999997 999999999887 7
Q ss_pred CCCCCCcCCCcCCCCHHHHH
Q 005255 331 SAVYHTKNDRLDLLKPGSLQ 350 (706)
Q Consensus 331 ~~~YHT~~Dt~d~id~~sLq 350 (706)
.+.|||+.||++++++++||
T Consensus 160 ~~~~Ht~~Dt~~~~~~~~l~ 179 (179)
T PF04389_consen 160 NPYYHTPEDTPDNLDPDTLQ 179 (179)
T ss_dssp GTTTTSTT-SGGGC-HHHH-
T ss_pred CCCCCCcccChhhcCCccCC
Confidence 78999999999999999987
No 4
>KOG2195 consensus Transferrin receptor and related proteins containing the protease-associated (PA) domain [Posttranslational modification, protein turnover, chaperones; Inorganic ion transport and metabolism; General function prediction only]
Probab=99.88 E-value=3.2e-22 Score=231.24 Aligned_cols=206 Identities=19% Similarity=0.258 Sum_probs=158.2
Q ss_pred cccccceEEEEEcCCCCCCCCCCeEEEeecccccCCCCCCCCChhHHHHHHHHHHHHHh---cCCCCCCcEEEEEeCCCC
Q 005255 158 IYSDLNHIVLRILPKYASEAGENAILVSSHIDTVSAGEGAGDCSSCVAVMLELARVMSQ---WAHEFKNAVIFLFNTGEE 234 (706)
Q Consensus 158 ~y~~~~NVi~~i~g~~~~~~~~~~Vll~aH~DSv~~~pGA~Dd~sgva~~LE~ar~L~~---~~~~p~~~I~flf~~~EE 234 (706)
.-.+..||+++|+|. .+++++|++++|.||| ..||.|+++|++.++|++|.+.+ .+++|+|+|+|++|+|||
T Consensus 334 ~~~ki~NIig~I~Gs---~epD~~ViigahrDSw--~~Ga~dp~sGta~Ll~i~~~~~~~~k~gwrP~RtI~F~sWdAeE 408 (702)
T KOG2195|consen 334 EETKIQNIIGKIEGS---EEPDRYVIIGAHRDSW--TFGAIDPNSGTALLLEIARALSKLKKRGWRPRRTILFASWDAEE 408 (702)
T ss_pred eeeeeeeEEEEEecC---cCCCeEEEEecccccc--ccCCcCCCccHHHHHHHHHHHHHHHHcCCCccceEEEEEccchh
Confidence 445899999999985 5789999999999999 48899999999999999999865 689999999999999999
Q ss_pred CCCcChHHHHhcCC--ccCCceEEEEeecCcCCCCccccccCCCHHHHHHHH---HHccCCCCcccccccccCCCCCCCC
Q 005255 235 EGLNGAHSFVTQHP--WSTTIRVAVDLEAMGIGGRSALFQAGPNLWAVENFA---AVAKYPSGQIIGQDLFASGVFETAT 309 (706)
Q Consensus 235 ~gl~GS~~f~~~~~--~~~~v~a~iNLD~~G~gg~~~lfq~g~~~~li~~y~---~~a~~p~~~~l~~e~f~~g~ips~T 309 (706)
.|+.||..|++++. ......+++|+|+++.++...-.+ .+|.+.+... +..+.|........+ .....+|
T Consensus 409 fGliGStE~~E~~~~~L~~~av~yin~d~~~~~~~~l~~~--~~PlL~~li~~~~k~~~~p~~~~~~~~v---~~~g~~S 483 (702)
T KOG2195|consen 409 FGLLGSTEWAEEYLKNLKSRAVVYINVDNAVLGDYTLHVK--TTPLLTDLIEEAAKSVLSPDKGDQSNRV---LSLGGGS 483 (702)
T ss_pred ccccccHHHHHHHHHHhhheeEEEEeccccccCCceeEEe--cCccHHHHHHHHHhccCCCCccccceeE---eccCCCC
Confidence 99999999998875 346789999999999875333333 3444443433 333445432211111 1226899
Q ss_pred chHHHhhcCCCeEEEEEeecCCCCCCCcCCCcCCC----CH--HHHHHHHHHHHHHHHHHhcCCCCCCCC
Q 005255 310 DFQVYTEVAGLSGLDFAYTDKSAVYHTKNDRLDLL----KP--GSLQHLGENMLDFLLQTASSTSIPKGN 373 (706)
Q Consensus 310 D~~~F~~~~GiPgld~a~~~~~~~YHT~~Dt~d~i----d~--~sLq~~g~~~l~ll~~la~~~~l~~~~ 373 (706)
||.+|..+.|||+++++|....+.|||.+||++.+ |+ .....++.+....+..+++++.+|.+.
T Consensus 484 d~~~F~~~~GIpsv~~~f~~~yP~yhs~~dt~~~~~k~~D~~~~~~~~~a~~~~~~~l~l~~d~llPfd~ 553 (702)
T KOG2195|consen 484 DYASFLQFAGIPSVDFAFNRTYPFYHSTYDTYEWLDKLLDPKFKQHLAAAGVLGLELLILADDPLLPFDI 553 (702)
T ss_pred cchhhccccCcceeeeeecCCcceeecccCcHHHHHHhcchhHHHHHHHHHHHHHHHHHHhcCccccCcH
Confidence 99999999999999999999888999999995544 33 333444556666667777777777653
No 5
>KOG3946 consensus Glutaminyl cyclase [Posttranslational modification, protein turnover, chaperones]
Probab=99.80 E-value=2.9e-18 Score=174.90 Aligned_cols=249 Identities=18% Similarity=0.241 Sum_probs=184.9
Q ss_pred CCCCHHHHHHHHHHHHcCCCCCCCCHHHHHHHHHHHHHHHhhccccCCcceEEEEeeeccCCCcccccccccCccccccc
Q 005255 82 RGFSELEAMKHVKALTQLGPHAVGSDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYSD 161 (706)
Q Consensus 82 ~~fs~erA~~~L~~L~~igpR~~gS~~~~~a~~yL~~~l~~ig~~~~~~~~vevd~f~~~~g~~~~~g~~~~~~~~~y~~ 161 (706)
++-+..|.++.|..+- -||..||+++.++++||.+.++.++ ..+|.|.|+...- ..+.+
T Consensus 46 ~~s~~~~~~~~L~p~l--v~Rvpgs~g~~~vr~~i~~~l~~l~------w~ve~~~f~~~tp-------------~g~~~ 104 (338)
T KOG3946|consen 46 PDSDWNRLWENLLPIL--VPRVPGSPGSRQVRRFIIQHLRNLG------WAVETDAFTDNTP-------------LGTRN 104 (338)
T ss_pred CCCCHHHHHHhhhhhh--ccccCCCCccHHHHHHHHHHHHhcC------ceeeeccccccCc-------------ceeee
Confidence 4567788888877774 3899999999999999999999996 4688887765311 12457
Q ss_pred cceEEEEEcCCCCCCCCCCeEEEeecccccCC----CCCCCCChhHHHHHHHHHHHHHhcC----CCCCCcEEEEEeCCC
Q 005255 162 LNHIVLRILPKYASEAGENAILVSSHIDTVSA----GEGAGDCSSCVAVMLELARVMSQWA----HEFKNAVIFLFNTGE 233 (706)
Q Consensus 162 ~~NVi~~i~g~~~~~~~~~~Vll~aH~DSv~~----~pGA~Dd~sgva~~LE~ar~L~~~~----~~p~~~I~flf~~~E 233 (706)
..|+|+++.+. ..+.+++.|||||.-. -.||.|.+..||.|+++++.+.+.- ..++-++.++|++||
T Consensus 105 f~nii~tl~~~-----A~r~lVlachydsk~~p~~~~vgatdsAvpcamll~laq~l~~~~~~~~~~s~lsL~LvFFDGE 179 (338)
T KOG3946|consen 105 FNNLIATLDPN-----ASRYLVLACHYDSKIFPGGMFVGATDSAVPCAMLLNLAQALDKILCSKVSASQLSLQLVFFDGE 179 (338)
T ss_pred eeeEEEecCCC-----cchheeeecccccccCCCcceEeeccccccHHHHHHHHHHHHHHHhcccCcCceeEEEEEeccH
Confidence 89999999764 5688999999999742 2689999999999999999998732 245678999999999
Q ss_pred CC--------CCcChHHHHhcC------C-----ccCCceEEEEeecCcCCCCccc--cccCCCHHHHHHH---HH----
Q 005255 234 EE--------GLNGAHSFVTQH------P-----WSTTIRVAVDLEAMGIGGRSAL--FQAGPNLWAVENF---AA---- 285 (706)
Q Consensus 234 E~--------gl~GS~~f~~~~------~-----~~~~v~a~iNLD~~G~gg~~~l--fq~g~~~~li~~y---~~---- 285 (706)
|. .++||++.+++. + ..+.+...+-+|-.|+.++..- |.. ++.|..+.- .+
T Consensus 180 EAf~eW~p~DSlYGsRhLA~~~~sw~~~~~r~~~~ld~idl~vLldllga~~p~f~~~~~~-t~~wF~Rl~~iE~~l~~~ 258 (338)
T KOG3946|consen 180 EAFEEWGPEDSLYGSRHLAAKWESWPHSGIRGDLLLDGIDLLVLLDLLGAPNPTFYNFFPN-TDRWFHRLQSIEGELALL 258 (338)
T ss_pred HHHhhcCCccccchHHHHHHHHhccCCCCCccccccccchHhhhHHHhcCCChhHhhcCcc-hHHHHHHHHHHHHHHHHH
Confidence 93 578999999761 1 1246677788888888776532 221 234433221 11
Q ss_pred --HccCCCCcccccccccCCCC--CCCCchHHHhhcCCCeEEEEEeecCCCCCCCcCCCcCCCCHHHHHHHHHHHHHHHH
Q 005255 286 --VAKYPSGQIIGQDLFASGVF--ETATDFQVYTEVAGLSGLDFAYTDKSAVYHTKNDRLDLLKPGSLQHLGENMLDFLL 361 (706)
Q Consensus 286 --~a~~p~~~~l~~e~f~~g~i--ps~TD~~~F~~~~GiPgld~a~~~~~~~YHT~~Dt~d~id~~sLq~~g~~~l~ll~ 361 (706)
...++.. ...|+.+.. --++||.||.. .|+|.+.+.......+|||+.|+..++|..+..|.+..+--++.
T Consensus 259 g~l~s~r~~----~~~Fq~~~~~~~veDDHiPFlr-rgVPVLHlI~~pFPsvWHt~dD~e~nldy~tt~~~~lilr~Fv~ 333 (338)
T KOG3946|consen 259 GLLASHRLP----PRYFQPGGLSSVVEDDHIPFLR-RGVPVLHLIPVPFPSVWHTPDDNERNLDYATTDNLALIIRVFVA 333 (338)
T ss_pred HHHHhccCC----chhccccCccccccCCcchhhh-cCCceEEecCCCCcccccCccchhhcCCchhHHHHHHHHHHHHH
Confidence 1122211 122443221 13789999998 99999999988888999999999999999999998887777665
Q ss_pred H
Q 005255 362 Q 362 (706)
Q Consensus 362 ~ 362 (706)
+
T Consensus 334 e 334 (338)
T KOG3946|consen 334 E 334 (338)
T ss_pred H
Confidence 5
No 6
>COG2234 Iap Predicted aminopeptidases [General function prediction only]
Probab=99.73 E-value=1.5e-17 Score=186.14 Aligned_cols=191 Identities=26% Similarity=0.316 Sum_probs=136.1
Q ss_pred ccceEEEEEcCCCC-------CCCCCCeEEEeecccccCCCCCCCCChhHHHHHHHHHHHHHhcCCCCCCcEEEEEeCCC
Q 005255 161 DLNHIVLRILPKYA-------SEAGENAILVSSHIDTVSAGEGAGDCSSCVAVMLELARVMSQWAHEFKNAVIFLFNTGE 233 (706)
Q Consensus 161 ~~~NVi~~i~g~~~-------~~~~~~~Vll~aH~DSv~~~pGA~Dd~sgva~~LE~ar~L~~~~~~p~~~I~flf~~~E 233 (706)
...|++.++++... ....++.+++++|+|+++.++||+||++|+|++||++|.|.+. +|+++|.|+++++|
T Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~s~~~~~GA~DNasGva~llEiAr~l~~~--~p~~~v~f~~~~aE 260 (435)
T COG2234 183 TSKNVAATISGSSQIIEAIIGTAHSDSLGLLGAHIDSVPTGPGADDNASGVAALLELARVLKGN--PPKRTVRFVAFGAE 260 (435)
T ss_pred EEEEEeeeeecccccceEEEeccCCCceeeecccccCCcCCCCcccccHHHHHHHHHHHHHhcC--CCCceEEEEEecch
Confidence 45666666655310 1236788999999999999999999999999999999999986 49999999999999
Q ss_pred CCCCcChHHHHhcCC--ccCCceEEEEeecCcCCCCccccccC---CC--HHHHHHHHHHccCCCCcccccccccCCCCC
Q 005255 234 EEGLNGAHSFVTQHP--WSTTIRVAVDLEAMGIGGRSALFQAG---PN--LWAVENFAAVAKYPSGQIIGQDLFASGVFE 306 (706)
Q Consensus 234 E~gl~GS~~f~~~~~--~~~~v~a~iNLD~~G~gg~~~lfq~g---~~--~~li~~y~~~a~~p~~~~l~~e~f~~g~ip 306 (706)
|.|+.||++|++++. ..+++..++|+||.|..++...++.. .+ ........+....+... .+. ....
T Consensus 261 E~Gl~GS~~~~~~~~~~~~~~~~~viN~Dm~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~-~~~~ 334 (435)
T COG2234 261 ESGLLGSEAYVKRLSKDLDKKIALVINLDMLGSPNPTPTLILYGNGLERVPPGLRAVAALIGRPVDP-----STV-QDFD 334 (435)
T ss_pred hhcccccHHHHhcCCcchhhhhheEEecccccCCCCCcceEEeccCCccccchHHHHHHHHHhhccc-----ccc-CCCC
Confidence 999999999996655 35778889999999997633223321 11 11122222211112111 111 1234
Q ss_pred CCCchHHHhhcCCCeEEEEEeecC-----CCCCCCcCCCcCCCCHHHHHHHHHHHHHHHHH
Q 005255 307 TATDFQVYTEVAGLSGLDFAYTDK-----SAVYHTKNDRLDLLKPGSLQHLGENMLDFLLQ 362 (706)
Q Consensus 307 s~TD~~~F~~~~GiPgld~a~~~~-----~~~YHT~~Dt~d~id~~sLq~~g~~~l~ll~~ 362 (706)
..+||.+|.. .|+|++.+..... ..++||..|| ++ +..+++..+..+.+....
T Consensus 335 ~~sd~~~f~~-~gi~~~~~~~~~~~~~~~~~~~~t~~d~-~~-d~~~~~~~~~~~~~~~~~ 392 (435)
T COG2234 335 PRSDHYPFTE-AGIPSLFLFSGAPGGVEAVAWGHTAADT-DK-DLSTLDQHGDAVAATLVL 392 (435)
T ss_pred CCCcchhhhh-cCCcceeeeecCCccccccccccccccc-cc-chhhhcccchhhhhhhhh
Confidence 5799999998 9999998875433 3589999999 88 888888877555444443
No 7
>TIGR03176 AllC allantoate amidohydrolase. This enzyme catalyzes the breakdown of allantoate, first to ureidoglycine by hydrolysis and then decarboxylation of one of the two equivalent ureido groups. Ureidoglycine then spontaneously exchanges ammonia for water resulting in ureidoglycolate. This enzyme is an alternative to allantoicase (3.5.3.4) which releases urea.
Probab=99.56 E-value=2.9e-14 Score=158.83 Aligned_cols=127 Identities=20% Similarity=0.141 Sum_probs=111.3
Q ss_pred HHHHHHHHHHHcCC-------CCCCCCHHHHHHHHHHHHHHHhhccccCCcceEEEEeeeccCCCcccccccccCccccc
Q 005255 87 LEAMKHVKALTQLG-------PHAVGSDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIY 159 (706)
Q Consensus 87 erA~~~L~~L~~ig-------pR~~gS~~~~~a~~yL~~~l~~ig~~~~~~~~vevd~f~~~~g~~~~~g~~~~~~~~~y 159 (706)
.|.+++|.+|.+|| +|...|+++.++++||.++++++| +++.+|
T Consensus 3 ~~~~~~~~~~~~~~~~~~~g~~R~~~s~~~~~a~~~~~~~~~~~G------l~v~~D----------------------- 53 (406)
T TIGR03176 3 KHFRQAIEELSSFGADPAGGMTRLLYSPEWLAAQQQFKKRMAESG------LETRFD----------------------- 53 (406)
T ss_pred HHHHHHHHHHhccCCCCCCceEeeeCCHHHHHHHHHHHHHHHHcC------CEEEEc-----------------------
Confidence 58899999999884 277789999999999999999998 356654
Q ss_pred cccceEEEEEcCCCCCCCCCCeEEEeecccccCCCCCCCCChhHHHHHHHHHHHHHhcCCCCCCcEEEEEeCCCCCC---
Q 005255 160 SDLNHIVLRILPKYASEAGENAILVSSHIDTVSAGEGAGDCSSCVAVMLELARVMSQWAHEFKNAVIFLFNTGEEEG--- 236 (706)
Q Consensus 160 ~~~~NVi~~i~g~~~~~~~~~~Vll~aH~DSv~~~pGA~Dd~sgva~~LE~ar~L~~~~~~p~~~I~flf~~~EE~g--- 236 (706)
...|++++++|. +++.++|++++|+||||. .|..|+..||++.||++|.|.+.+.+|+++|.+++|.+||.+
T Consensus 54 -~~gN~~~~~~g~---~~~~~~i~~gsHlDtv~~-gG~~dg~~Gv~~~le~~~~l~~~~~~~~~~i~vi~~~~EEg~rf~ 128 (406)
T TIGR03176 54 -DVGNLYGRLVGT---EFPEETILTGSHIDTVVN-GGNLDGQFGALAAWLAVDYLKEKYGAPLRTVEVLSMAEEEGSRFP 128 (406)
T ss_pred -CCCcEEEEecCC---CCCCCeEEEeccccCCCC-CCccCchhhHHHHHHHHHHHHHcCCCCCCCeEEEEeccccCccCC
Confidence 458999999986 345689999999999994 688999999999999999999998899999999999999986
Q ss_pred --CcChHHHHhcC
Q 005255 237 --LNGAHSFVTQH 247 (706)
Q Consensus 237 --l~GS~~f~~~~ 247 (706)
+.||+.+..+.
T Consensus 129 ~~~~Gs~~~~g~~ 141 (406)
T TIGR03176 129 YVFWGSKNIFGLA 141 (406)
T ss_pred cccccHHHHhCCC
Confidence 99999998543
No 8
>PRK12890 allantoate amidohydrolase; Reviewed
Probab=99.49 E-value=3.4e-13 Score=150.28 Aligned_cols=128 Identities=18% Similarity=0.183 Sum_probs=107.2
Q ss_pred CHHHHHHHHHHHHcCC------CCCCCCHHHHHHHHHHHHHHHhhccccCCcceEEEEeeeccCCCcccccccccCcccc
Q 005255 85 SELEAMKHVKALTQLG------PHAVGSDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLI 158 (706)
Q Consensus 85 s~erA~~~L~~L~~ig------pR~~gS~~~~~a~~yL~~~l~~ig~~~~~~~~vevd~f~~~~g~~~~~g~~~~~~~~~ 158 (706)
+.+++++++.++.+|+ .|+..|+++.++.+||.++|++.|. +++.+
T Consensus 7 ~~~~~~~~~~~~~~i~~~~~~~~~~s~~~~e~~~~~~l~~~l~~~G~------~~~~~---------------------- 58 (414)
T PRK12890 7 NGERLLARLEELAAIGRDGPGWTRLALSDEERAARALLAAWMRAAGL------EVRRD---------------------- 58 (414)
T ss_pred CHHHHHHHHHHHhccCCCCCceeeccCCHHHHHHHHHHHHHHHHCCC------EEEEc----------------------
Confidence 5689999999999875 3567798889999999999999983 44432
Q ss_pred ccccceEEEEEcCCCCCCCCCCeEEEeecccccCCCCCCCCChhHHHHHHHHHHHHHhcCCCCCCcEEEEEeCCCCC---
Q 005255 159 YSDLNHIVLRILPKYASEAGENAILVSSHIDTVSAGEGAGDCSSCVAVMLELARVMSQWAHEFKNAVIFLFNTGEEE--- 235 (706)
Q Consensus 159 y~~~~NVi~~i~g~~~~~~~~~~Vll~aH~DSv~~~pGA~Dd~sgva~~LE~ar~L~~~~~~p~~~I~flf~~~EE~--- 235 (706)
...|++++++|+ ..+.+.|++++|+|+||. .|+.|+++|+|++|++++.|.+.+.+++++|.|+++.+||.
T Consensus 59 --~~~nlia~~~g~---~~~~~~l~~~~H~DtVp~-~g~~D~~~g~aa~l~a~~~l~~~~~~~~~~i~~~~~~dEE~~~~ 132 (414)
T PRK12890 59 --AAGNLFGRLPGR---DPDLPPLMTGSHLDTVPN-GGRYDGILGVLAGLEVVAALREAGIRPPHPLEVIAFTNEEGVRF 132 (414)
T ss_pred --CCCcEEEEeCCC---CCCCCEEEEeCcccCCCC-CCCcCCHHHHHHHHHHHHHHHHcCCCCCCCeEEEEEeccccccc
Confidence 235999999764 234578999999999985 57899999999999999999988777899999999999997
Q ss_pred --CCcChHHHHhc
Q 005255 236 --GLNGAHSFVTQ 246 (706)
Q Consensus 236 --gl~GS~~f~~~ 246 (706)
++.||+.+.+.
T Consensus 133 ~~~~~G~~~~~~~ 145 (414)
T PRK12890 133 GPSMIGSRALAGT 145 (414)
T ss_pred CCccccHHHHHcc
Confidence 66899888743
No 9
>PRK09133 hypothetical protein; Provisional
Probab=99.49 E-value=5.6e-13 Score=151.12 Aligned_cols=151 Identities=20% Similarity=0.249 Sum_probs=116.5
Q ss_pred CCCCHHHHHHHHHHHHcCCCCCCCCHHHHHHHHHHHHHHHhhccccCCcceEEEEeeeccCCCcccccccccCccccccc
Q 005255 82 RGFSELEAMKHVKALTQLGPHAVGSDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYSD 161 (706)
Q Consensus 82 ~~fs~erA~~~L~~L~~igpR~~gS~~~~~a~~yL~~~l~~ig~~~~~~~~vevd~f~~~~g~~~~~g~~~~~~~~~y~~ 161 (706)
++.+.+++.+.|++|.+|.. ..+..++.++.+||.++++++|.+.. .++++ .. ..+
T Consensus 32 ~~~~~~~~~~~l~~Lv~i~S-~s~~~~e~~~~~~l~~~l~~~G~~~~---~~~~~--~~------------------~~~ 87 (472)
T PRK09133 32 PTADQQAARDLYKELIEINT-TASTGSTTPAAEAMAARLKAAGFADA---DIEVT--GP------------------YPR 87 (472)
T ss_pred cchhHHHHHHHHHHHhccCC-CCCCcchHHHHHHHHHHHHHcCCCce---EEEec--cC------------------CCC
Confidence 46789999999999999843 22234566899999999999984210 12221 10 013
Q ss_pred cceEEEEEcCCCCCCCCCCeEEEeecccccCC--------------------CCCCCCChhHHHHHHHHHHHHHhcCCCC
Q 005255 162 LNHIVLRILPKYASEAGENAILVSSHIDTVSA--------------------GEGAGDCSSCVAVMLELARVMSQWAHEF 221 (706)
Q Consensus 162 ~~NVi~~i~g~~~~~~~~~~Vll~aH~DSv~~--------------------~pGA~Dd~sgva~~LE~ar~L~~~~~~p 221 (706)
..|++++++|+ .+.+.|++++|+|+||. ++|+.||++|++++|++++.|.+.+..+
T Consensus 88 ~~nli~~~~g~----~~~~~lll~~H~DtVp~~~~~W~~dPf~~~~~dg~iyGRGa~D~Kg~~aa~l~a~~~l~~~~~~~ 163 (472)
T PRK09133 88 KGNLVARLRGT----DPKKPILLLAHMDVVEAKREDWTRDPFKLVEENGYFYGRGTSDDKADAAIWVATLIRLKREGFKP 163 (472)
T ss_pred ceeEEEEecCC----CCCCcEEEEeecccCCCChhcCCCCCCcceEeCCEEEecCcccchHHHHHHHHHHHHHHhcCCCC
Confidence 57999999764 23367999999999984 4899999999999999999998877788
Q ss_pred CCcEEEEEeCCCC-CCCcChHHHHhcCCccCCceEEEEeec
Q 005255 222 KNAVIFLFNTGEE-EGLNGAHSFVTQHPWSTTIRVAVDLEA 261 (706)
Q Consensus 222 ~~~I~flf~~~EE-~gl~GS~~f~~~~~~~~~v~a~iNLD~ 261 (706)
+++|.|++..+|| .|..|++.+.++++...+..++|+ |.
T Consensus 164 ~~~i~~~~~~dEE~~g~~G~~~l~~~~~~~~~~~~~i~-e~ 203 (472)
T PRK09133 164 KRDIILALTGDEEGTPMNGVAWLAENHRDLIDAEFALN-EG 203 (472)
T ss_pred CCCEEEEEECccccCccchHHHHHHHHhhccCeEEEEE-CC
Confidence 9999999999999 789999999976654334567788 64
No 10
>PRK12891 allantoate amidohydrolase; Reviewed
Probab=99.48 E-value=4.6e-13 Score=149.43 Aligned_cols=129 Identities=20% Similarity=0.235 Sum_probs=108.5
Q ss_pred CCCHHHHHHHHHHHHcCC--C-----CCCCCHHHHHHHHHHHHHHHhhccccCCcceEEEEeeeccCCCcccccccccCc
Q 005255 83 GFSELEAMKHVKALTQLG--P-----HAVGSDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGK 155 (706)
Q Consensus 83 ~fs~erA~~~L~~L~~ig--p-----R~~gS~~~~~a~~yL~~~l~~ig~~~~~~~~vevd~f~~~~g~~~~~g~~~~~~ 155 (706)
.++.+|.+++++.|.+|+ | |...|+++.++++||.++|++.|. +++.+
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~g~~r~~~~~~e~~~~~~l~~~l~~~G~------~v~~~------------------- 60 (414)
T PRK12891 6 RVDGERLWASLERMAQIGATPKGGVCRLALTDGDREARDLFVAWARDAGC------TVRVD------------------- 60 (414)
T ss_pred ccCHHHHHHHHHHHHhccCCCCCceeeccCCHHHHHHHHHHHHHHHHCCC------EEEEC-------------------
Confidence 346779999999999984 2 778899999999999999999983 45543
Q ss_pred cccccccceEEEEEcCCCCCCCCCCeEEEeecccccCCCCCCCCChhHHHHHHHHHHHHHhcCCCCCCcEEEEEeCCCCC
Q 005255 156 TLIYSDLNHIVLRILPKYASEAGENAILVSSHIDTVSAGEGAGDCSSCVAVMLELARVMSQWAHEFKNAVIFLFNTGEEE 235 (706)
Q Consensus 156 ~~~y~~~~NVi~~i~g~~~~~~~~~~Vll~aH~DSv~~~pGA~Dd~sgva~~LE~ar~L~~~~~~p~~~I~flf~~~EE~ 235 (706)
...|++++++|+ ++..+.|++++|+||||. .|..|+++|+++++++++.|.+.+.+++++|.++++.+||.
T Consensus 61 -----~~gNl~a~~~g~---~~~~~~l~~~~H~DtVp~-gg~~D~k~Gv~a~l~a~~~l~~~~~~~~~~i~v~~~~dEE~ 131 (414)
T PRK12891 61 -----AMGNLFARRAGR---DPDAAPVMTGSHADSQPT-GGRYDGIYGVLGGLEVVRALNDAGIETERPVDVVIWTNEEG 131 (414)
T ss_pred -----CCCCEEEEecCC---CCCCCeEEEEecccCCCC-CccccchhhHHHHHHHHHHHHHcCCCCCCCeEEEEeccccc
Confidence 235999999874 224578999999999985 46789999999999999999998888999999999999998
Q ss_pred C-----CcChHHHHh
Q 005255 236 G-----LNGAHSFVT 245 (706)
Q Consensus 236 g-----l~GS~~f~~ 245 (706)
+ +.||+.+..
T Consensus 132 ~~f~~~~~Gs~~~~g 146 (414)
T PRK12891 132 SRFAPSMVGSGVFFG 146 (414)
T ss_pred CcCCcccccHHHHhC
Confidence 5 579988753
No 11
>PRK08262 hypothetical protein; Provisional
Probab=99.47 E-value=6.1e-13 Score=151.34 Aligned_cols=170 Identities=16% Similarity=0.209 Sum_probs=125.8
Q ss_pred hhHHHHHHHHHHHHHHHHHhhhhhcccCCCCCcccccCCCCCCHHHHHHHHHHHHcCCCCCCCCHH-------HHHHHHH
Q 005255 43 RSGLVWTVVFATLICASYGVYYYQYEHMPPPLTAEQAGRRGFSELEAMKHVKALTQLGPHAVGSDA-------LDRALQY 115 (706)
Q Consensus 43 r~~~~~l~~~ll~~~~~~~v~~~~~~~lP~~~~~~~a~~~~fs~erA~~~L~~L~~igpR~~gS~~-------~~~a~~y 115 (706)
|++++.|+.+++++..+++++++.|++..-.+++ -.+...+.+++.+.|++|.++..- .+.++ ..+..+|
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~v~~L~~lv~i~S~-s~~~~~~~~~~~~~~~~~~ 78 (486)
T PRK08262 2 RRILLGLLALLLLLAAVLAVRTFRFKSRQIDVPA--VAPVAVDEDAAAERLSEAIRFRTI-SNRDRAEDDAAAFDALHAH 78 (486)
T ss_pred cchHHHHHHHHHHHHHhhhheeEEcccCCCCccc--cCCCcCCHHHHHHHHHHhccccee-ccCCCCcccHHHHHHHHHH
Confidence 4556666666777778888998888655444432 224568899999999999997542 22221 1357888
Q ss_pred HHHHHHhhccccCCcceEEEEeeeccCCCcccccccccCccccccccceEEEEEcCCCCCCCCCCeEEEeecccccCC--
Q 005255 116 VLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYSDLNHIVLRILPKYASEAGENAILVSSHIDTVSA-- 193 (706)
Q Consensus 116 L~~~l~~ig~~~~~~~~vevd~f~~~~g~~~~~g~~~~~~~~~y~~~~NVi~~i~g~~~~~~~~~~Vll~aH~DSv~~-- 193 (706)
|.+++++++. +++... . +..|+++.++|+ ++..+.|++.+|+|+||.
T Consensus 79 L~~~~~~~g~------~~~~~~--~--------------------~~~~vv~~~~g~---~~~~~~ill~gH~DvVp~~~ 127 (486)
T PRK08262 79 LEESYPAVHA------ALEREV--V--------------------GGHSLLYTWKGS---DPSLKPIVLMAHQDVVPVAP 127 (486)
T ss_pred HHHhChhhhc------eeEEEE--E--------------------CCccEEEEEECC---CCCCCeEEEECcccccCCCC
Confidence 8888887763 233221 0 125788888764 223378999999999974
Q ss_pred ---------------------CCCCCCChhHHHHHHHHHHHHHhcCCCCCCcEEEEEeCCCCCCCcChHHHHhc
Q 005255 194 ---------------------GEGAGDCSSCVAVMLELARVMSQWAHEFKNAVIFLFNTGEEEGLNGAHSFVTQ 246 (706)
Q Consensus 194 ---------------------~pGA~Dd~sgva~~LE~ar~L~~~~~~p~~~I~flf~~~EE~gl~GS~~f~~~ 246 (706)
++|+.||++|++++|.+++.|.+.+.+++++|.|+|..+||.|..|++.+.+.
T Consensus 128 ~~~~~W~~~Pf~~~~~dg~lyGRG~~D~Kg~~aa~L~A~~~l~~~~~~l~~~I~llf~~dEE~g~~G~~~l~~~ 201 (486)
T PRK08262 128 GTEGDWTHPPFSGVIADGYVWGRGALDDKGSLVAILEAAEALLAQGFQPRRTIYLAFGHDEEVGGLGARAIAEL 201 (486)
T ss_pred CCcccCccCCCceEeeCCEEEecCccccchhHHHHHHHHHHHHHcCCCCCCeEEEEEecccccCCcCHHHHHHH
Confidence 36999999999999999999998877788999999999999998999988853
No 12
>TIGR01879 hydantase amidase, hydantoinase/carbamoylase family. Enzymes in this subfamily hydrolize the amide bonds of compounds containing carbamoyl groups or hydantoin rings. These enzymes are members of the broader family of amidases represented by pfam01546.
Probab=99.46 E-value=7.1e-13 Score=147.26 Aligned_cols=126 Identities=20% Similarity=0.159 Sum_probs=106.0
Q ss_pred HHHHHHHHHHcCCC-------CCCCCHHHHHHHHHHHHHHHhhccccCCcceEEEEeeeccCCCcccccccccCcccccc
Q 005255 88 EAMKHVKALTQLGP-------HAVGSDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYS 160 (706)
Q Consensus 88 rA~~~L~~L~~igp-------R~~gS~~~~~a~~yL~~~l~~ig~~~~~~~~vevd~f~~~~g~~~~~g~~~~~~~~~y~ 160 (706)
|.++++..+.+++. |...|+++.++++||.+++++.|. ++++|
T Consensus 2 ~~~~~~~~~~~~~~~~~~g~~r~~~~~~e~~~~~~l~~~~~~~G~------~~~~~------------------------ 51 (401)
T TIGR01879 2 RLWETLMWLGEVGADPAGGMTRLALSPEDREAQDLFKKRMRAAGL------EVRFD------------------------ 51 (401)
T ss_pred hHHHHHHHHhcccCCCCCceEeCCCCHHHHHHHHHHHHHHHHCCC------EEEEe------------------------
Confidence 67888999988743 555688888999999999999983 45443
Q ss_pred ccceEEEEEcCCCCCCCCCCeEEEeecccccCCCCCCCCChhHHHHHHHHHHHHHhcCCCCCCcEEEEEeCCCCC-----
Q 005255 161 DLNHIVLRILPKYASEAGENAILVSSHIDTVSAGEGAGDCSSCVAVMLELARVMSQWAHEFKNAVIFLFNTGEEE----- 235 (706)
Q Consensus 161 ~~~NVi~~i~g~~~~~~~~~~Vll~aH~DSv~~~pGA~Dd~sgva~~LE~ar~L~~~~~~p~~~I~flf~~~EE~----- 235 (706)
+..||+++++|+ .++.+.|++++|+||||. .|..|+..|++++|++++.|.+.+.+|+++|.|+++.+||.
T Consensus 52 ~~~nl~a~~~g~---~~~~~~l~~~~H~DtV~~-gg~~dg~~gvaa~l~a~~~l~~~g~~~~~~i~~~~~~dEE~~~f~~ 127 (401)
T TIGR01879 52 EVGNLIGRKEGT---EPPLEVVLSGSHIDTVVN-GGNFDGQLGVLAGIEVVDALKEAYVVPLHPIEVVAFTEEEGSRFPY 127 (401)
T ss_pred cCCcEEEEecCC---CCCCCEEEEecccccCCC-CCccCCHHHHHHHHHHHHHHHHcCCCCCCCeEEEEEeCCcCcCccc
Confidence 236999999875 223578999999999985 47889999999999999999998888999999999999997
Q ss_pred CCcChHHHHhcC
Q 005255 236 GLNGAHSFVTQH 247 (706)
Q Consensus 236 gl~GS~~f~~~~ 247 (706)
++.||+.++.+.
T Consensus 128 ~~~Gs~~~~~~~ 139 (401)
T TIGR01879 128 GMWGSRNMVGLA 139 (401)
T ss_pred ccccHHHHhccc
Confidence 789999998544
No 13
>PRK13590 putative bifunctional OHCU decarboxylase/allantoate amidohydrolase; Provisional
Probab=99.45 E-value=6.8e-13 Score=154.37 Aligned_cols=128 Identities=16% Similarity=0.130 Sum_probs=108.2
Q ss_pred CHHHHHHHHHHHHcCCC----------CCCCCHHHHHHHHHHHHHHHhhccccCCcceEEEEeeeccCCCcccccccccC
Q 005255 85 SELEAMKHVKALTQLGP----------HAVGSDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKG 154 (706)
Q Consensus 85 s~erA~~~L~~L~~igp----------R~~gS~~~~~a~~yL~~~l~~ig~~~~~~~~vevd~f~~~~g~~~~~g~~~~~ 154 (706)
-.+|.++++.+|++|+. |...|+++.++++||.++++++|.+ ++++|
T Consensus 179 ~~~r~~~~~~~l~~~~~~~~~~~~g~~R~~~s~~~~~~~~~l~~~~~~~Gl~-----~v~~D------------------ 235 (591)
T PRK13590 179 LGNDVWDWAERLAAHSDPGYAEKGQLTVTYLTDAHRACAQQISHWMRDCGFD-----EVHID------------------ 235 (591)
T ss_pred HHHHHHHHHHHHhcccCCCCCCCCceeeeeCCHHHHHHHHHHHHHHHHcCCC-----eeeEC------------------
Confidence 46899999999998743 3445899999999999999999830 45543
Q ss_pred ccccccccceEEEEEcCCCCCCCCCCeEEEeecccccCCCCCCCCChhHHHHHHHHHHHHHhcCCCCCCcEEEEEeCCCC
Q 005255 155 KTLIYSDLNHIVLRILPKYASEAGENAILVSSHIDTVSAGEGAGDCSSCVAVMLELARVMSQWAHEFKNAVIFLFNTGEE 234 (706)
Q Consensus 155 ~~~~y~~~~NVi~~i~g~~~~~~~~~~Vll~aH~DSv~~~pGA~Dd~sgva~~LE~ar~L~~~~~~p~~~I~flf~~~EE 234 (706)
...|++++++|+ ++..++|++++|+|||+. .|..|+..||+++||++|.|.+.+.+++++|.|++|.+||
T Consensus 236 ------~~GNl~~~~~g~---~~~~~~v~~gsHlDTV~~-gG~~DG~~Gv~a~lea~~~l~~~~~~~~~~i~vv~~~~EE 305 (591)
T PRK13590 236 ------AVGNVVGRYKGS---TPQAKRLLTGSHYDTVRN-GGKYDGRLGIFVPMACVRELHRQGRRLPFGLEVVGFAEEE 305 (591)
T ss_pred ------CCCCEEEEecCC---CCCCCeEEEecccccCCC-CCCcccHHHHHHHHHHHHHHHHcCCCCCCCeEEEEecCCc
Confidence 468999999875 234578999999999984 5789999999999999999999988889999999999999
Q ss_pred C-----CCcChHHHHh
Q 005255 235 E-----GLNGAHSFVT 245 (706)
Q Consensus 235 ~-----gl~GS~~f~~ 245 (706)
. ++.||+.+..
T Consensus 306 g~rF~~~~~GS~~~~G 321 (591)
T PRK13590 306 GQRYKATFLGSGALIG 321 (591)
T ss_pred cccCCccccchHHHhC
Confidence 7 5899999875
No 14
>PRK09290 allantoate amidohydrolase; Reviewed
Probab=99.44 E-value=1.4e-12 Score=145.42 Aligned_cols=130 Identities=20% Similarity=0.203 Sum_probs=107.7
Q ss_pred CCHHHHHHHHHHHHcCCC-------CCCCCHHHHHHHHHHHHHHHhhccccCCcceEEEEeeeccCCCcccccccccCcc
Q 005255 84 FSELEAMKHVKALTQLGP-------HAVGSDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKT 156 (706)
Q Consensus 84 fs~erA~~~L~~L~~igp-------R~~gS~~~~~a~~yL~~~l~~ig~~~~~~~~vevd~f~~~~g~~~~~g~~~~~~~ 156 (706)
.+.+++++++++|+++++ |+..|.++.++.+||.++|+++|. +++++
T Consensus 4 ~~~~~~~~~~~~l~~~~~~~~~g~~~~s~s~~e~~~a~~l~~~l~~~g~------~~~~~-------------------- 57 (413)
T PRK09290 4 IDAERLWARLDELAKIGATPDGGVTRLALSPEDLQARDLFAEWMEAAGL------TVRVD-------------------- 57 (413)
T ss_pred cCHHHHHHHHHHHhcccCCCCCceeeccCCHHHHHHHHHHHHHHHHcCC------EEEEc--------------------
Confidence 467999999999999854 667788888999999999999983 44432
Q ss_pred ccccccceEEEEEcCCCCCCCCCCeEEEeecccccCCCCCCCCChhHHHHHHHHHHHHHhcCCCCCCcEEEEEeCCCCC-
Q 005255 157 LIYSDLNHIVLRILPKYASEAGENAILVSSHIDTVSAGEGAGDCSSCVAVMLELARVMSQWAHEFKNAVIFLFNTGEEE- 235 (706)
Q Consensus 157 ~~y~~~~NVi~~i~g~~~~~~~~~~Vll~aH~DSv~~~pGA~Dd~sgva~~LE~ar~L~~~~~~p~~~I~flf~~~EE~- 235 (706)
...|++++++|. ..+.+.|++++|+|+||. .|..|++.|+|+++++++.|.+.+.+++++|.|+++.+||.
T Consensus 58 ----~~~nl~a~~~g~---~~~~~~l~l~gH~DtVp~-~g~~d~k~g~aa~l~a~~~l~~~~~~~~~~i~~~~~~dEE~g 129 (413)
T PRK09290 58 ----AVGNLFGRLEGR---DPDAPAVLTGSHLDTVPN-GGRFDGPLGVLAGLEAVRTLNERGIRPRRPIEVVAFTNEEGS 129 (413)
T ss_pred ----CCCcEEEEecCC---CCCCCEEEEecCccCCCC-CCCcCCHHHHHHHHHHHHHHHHcCCCCCCCeEEEEEcCCccc
Confidence 236999999763 123468999999999985 46789999999999999999988777889999999999998
Q ss_pred ----CCcChHHHHhcC
Q 005255 236 ----GLNGAHSFVTQH 247 (706)
Q Consensus 236 ----gl~GS~~f~~~~ 247 (706)
|+.|++.+++++
T Consensus 130 ~~g~~~~G~~~~~~~~ 145 (413)
T PRK09290 130 RFGPAMLGSRVFTGAL 145 (413)
T ss_pred cccCccccHHHHHccc
Confidence 568999887554
No 15
>PRK13799 unknown domain/N-carbamoyl-L-amino acid hydrolase fusion protein; Provisional
Probab=99.44 E-value=7.6e-13 Score=153.91 Aligned_cols=127 Identities=16% Similarity=0.180 Sum_probs=112.6
Q ss_pred CHHHHHHHHHHHHcCC----------CCCCCCHHHHHHHHHHHHHHHhhccccCCcce-EEEEeeeccCCCccccccccc
Q 005255 85 SELEAMKHVKALTQLG----------PHAVGSDALDRALQYVLAASQKIKESKHWEAD-VEVDFFHAKSGANRVGTGVFK 153 (706)
Q Consensus 85 s~erA~~~L~~L~~ig----------pR~~gS~~~~~a~~yL~~~l~~ig~~~~~~~~-vevd~f~~~~g~~~~~g~~~~ 153 (706)
..+|.++++.+|++|+ +|...|+++.++++|+.+++++.|. + +++|
T Consensus 179 ~~~r~~~~l~~l~~~~~~~~~~~~g~~R~~~s~~~~~~~~~~~~~~~~~Gl------~~v~~D----------------- 235 (591)
T PRK13799 179 IGADVMDWAEDIAAHSDPGYADEGALTCTYLSDAHRACANQISDWMRDAGF------DEVEID----------------- 235 (591)
T ss_pred HHHHHHHHHHHHHhccCCCCCCCCceEeeeCCHHHHHHHHHHHHHHHHcCC------CeEeEC-----------------
Confidence 5789999999999986 1677899999999999999999993 4 6665
Q ss_pred CccccccccceEEEEEcCCCCCCCCCCeEEEeecccccCCCCCCCCChhHHHHHHHHHHHHHhcCCCCCCcEEEEEeCCC
Q 005255 154 GKTLIYSDLNHIVLRILPKYASEAGENAILVSSHIDTVSAGEGAGDCSSCVAVMLELARVMSQWAHEFKNAVIFLFNTGE 233 (706)
Q Consensus 154 ~~~~~y~~~~NVi~~i~g~~~~~~~~~~Vll~aH~DSv~~~pGA~Dd~sgva~~LE~ar~L~~~~~~p~~~I~flf~~~E 233 (706)
...||+++++|+ +++.++|++++|+|||+ ..|.-|+..||+++||++|.|.+.+.+++++|.++.|.+|
T Consensus 236 -------~~gNv~~~~~g~---~~~~p~v~~gSHlDTV~-~gG~~DG~~Gv~a~l~~~~~l~~~~~~~~~~i~vi~~~~E 304 (591)
T PRK13799 236 -------AVGNVVGRYKAA---DDDAKTLITGSHYDTVR-NGGKYDGREGIFLAIACVKELHEQGERLPFHFEVIAFAEE 304 (591)
T ss_pred -------CCCCEEEEcCCC---CCCCCeEEEeccccccC-CCCccccHHHHHHHHHHHHHHHHcCCCCCCCeEEEEecCC
Confidence 468999999875 24568999999999998 5789999999999999999999999999999999999999
Q ss_pred CC-----CCcChHHHHh
Q 005255 234 EE-----GLNGAHSFVT 245 (706)
Q Consensus 234 E~-----gl~GS~~f~~ 245 (706)
|. ++.||+.+..
T Consensus 305 Eg~rF~~~~~GS~~~~G 321 (591)
T PRK13799 305 EGQRFKATFLGSGALIG 321 (591)
T ss_pred CccCCCccccchHHHhC
Confidence 97 7899999985
No 16
>PRK06133 glutamate carboxypeptidase; Reviewed
Probab=99.43 E-value=3.3e-12 Score=142.38 Aligned_cols=146 Identities=21% Similarity=0.294 Sum_probs=111.8
Q ss_pred CHHHHHHHHHHHHcCCCCCCCC-HHHHHHHHHHHHHHHhhccccCCcceEEEEeeeccCCCcccccccccCccccccccc
Q 005255 85 SELEAMKHVKALTQLGPHAVGS-DALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYSDLN 163 (706)
Q Consensus 85 s~erA~~~L~~L~~igpR~~gS-~~~~~a~~yL~~~l~~ig~~~~~~~~vevd~f~~~~g~~~~~g~~~~~~~~~y~~~~ 163 (706)
..+++.+.+++|++|.. ..+. +++.++.+||.++|+++|. +++.+.... ....
T Consensus 35 ~~~~~~~~l~~lv~i~S-~s~~~~~~~~~~~~l~~~L~~~G~------~v~~~~~~~-------------------~~~~ 88 (410)
T PRK06133 35 EQPAYLDTLKELVSIES-GSGDAEGLKQVAALLAERLKALGA------KVERAPTPP-------------------SAGD 88 (410)
T ss_pred hHHHHHHHHHHHHcCCC-CCCCHHHHHHHHHHHHHHHHhCCC------eEEEEccCC-------------------CCCC
Confidence 44688899999999833 3333 3346899999999999983 344331100 1246
Q ss_pred eEEEEEcCCCCCCCCCCeEEEeecccccCC-----------------CCCCCCChhHHHHHHHHHHHHHhcCCCCCCcEE
Q 005255 164 HIVLRILPKYASEAGENAILVSSHIDTVSA-----------------GEGAGDCSSCVAVMLELARVMSQWAHEFKNAVI 226 (706)
Q Consensus 164 NVi~~i~g~~~~~~~~~~Vll~aH~DSv~~-----------------~pGA~Dd~sgva~~LE~ar~L~~~~~~p~~~I~ 226 (706)
|++++++|+ +.+.|++.+|+|+||. ++|+.|+++|++++|++++.|.+.+.+++.+|.
T Consensus 89 ~lia~~~g~-----~~~~ill~~H~D~Vp~~~~w~~~Pf~~~~~~iyGrG~~D~kgg~a~~l~a~~~l~~~~~~~~~~i~ 163 (410)
T PRK06133 89 MVVATFKGT-----GKRRIMLIAHMDTVYLPGMLAKQPFRIDGDRAYGPGIADDKGGVAVILHALKILQQLGFKDYGTLT 163 (410)
T ss_pred eEEEEECCC-----CCceEEEEeecCccCCCCccCCCCEEEECCEEECCccccchHHHHHHHHHHHHHHHcCCCCCCCEE
Confidence 999999753 2367999999999984 379999999999999999999887767788999
Q ss_pred EEEeCCCCCCCcChHHHHhcCCccCCceEEEEeecCc
Q 005255 227 FLFNTGEEEGLNGAHSFVTQHPWSTTIRVAVDLEAMG 263 (706)
Q Consensus 227 flf~~~EE~gl~GS~~f~~~~~~~~~v~a~iNLD~~G 263 (706)
|+|..+||.|..|++.+.++... +...+++.|...
T Consensus 164 ~~~~~dEE~g~~G~~~~~~~~~~--~~d~~i~~ep~~ 198 (410)
T PRK06133 164 VLFNPDEETGSPGSRELIAELAA--QHDVVFSCEPGR 198 (410)
T ss_pred EEEECCcccCCccHHHHHHHHhc--cCCEEEEeCCCC
Confidence 99999999999999999965432 356778877543
No 17
>PRK12892 allantoate amidohydrolase; Reviewed
Probab=99.41 E-value=2.8e-12 Score=142.65 Aligned_cols=130 Identities=21% Similarity=0.234 Sum_probs=107.3
Q ss_pred CCCHHHHHHHHHHHHcCCC------CCCCCHHHHHHHHHHHHHHHhhccccCCcceEEEEeeeccCCCcccccccccCcc
Q 005255 83 GFSELEAMKHVKALTQLGP------HAVGSDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKT 156 (706)
Q Consensus 83 ~fs~erA~~~L~~L~~igp------R~~gS~~~~~a~~yL~~~l~~ig~~~~~~~~vevd~f~~~~g~~~~~g~~~~~~~ 156 (706)
+.+.+|+++.+++|++++. |+..++++.++++||.++|+++|. +++.+
T Consensus 6 ~~~~~~~~~~~~~~~~~~s~~~g~~~~s~~~~e~~~~~~l~~~l~~~G~------~~~~~-------------------- 59 (412)
T PRK12892 6 RIDGQRVLDDLMELAAIGAAKTGVHRPTYSDAHVAARRRLAAWCEAAGL------AVRID-------------------- 59 (412)
T ss_pred cccHHHHHHHHHHHHccCCCCCCeeeCCCCHHHHHHHHHHHHHHHHcCC------EEEEc--------------------
Confidence 3467899999999999864 455677778999999999999983 44432
Q ss_pred ccccccceEEEEEcCCCCCCCCCCeEEEeecccccCCCCCCCCChhHHHHHHHHHHHHHhcCCCCCCcEEEEEeCCCCC-
Q 005255 157 LIYSDLNHIVLRILPKYASEAGENAILVSSHIDTVSAGEGAGDCSSCVAVMLELARVMSQWAHEFKNAVIFLFNTGEEE- 235 (706)
Q Consensus 157 ~~y~~~~NVi~~i~g~~~~~~~~~~Vll~aH~DSv~~~pGA~Dd~sgva~~LE~ar~L~~~~~~p~~~I~flf~~~EE~- 235 (706)
...|++++++|+. +.+.|++++|+||||. .|-.|+..|++++|++++.|.+.+.+++++|.|+++.+||.
T Consensus 60 ----~~~nl~a~~~g~~----~~~~l~l~gH~DtVp~-~g~~dg~~Gvaa~l~a~~~l~~~~~~~~~~i~~~~~~dEE~~ 130 (412)
T PRK12892 60 ----GIGNVFGRLPGPG----PGPALLVGSHLDSQNL-GGRYDGALGVVAGLEAARALNEHGIATRHPLDVVAWCDEEGS 130 (412)
T ss_pred ----CCCcEEEEecCCC----CCCeEEEEccccCCCC-CCcccchHHHHHHHHHHHHHHHcCCCCCCCeEEEEecCcccc
Confidence 2359999998741 2378999999999985 36789999999999999999998888899999999999998
Q ss_pred ----CCcChHHHHhcC
Q 005255 236 ----GLNGAHSFVTQH 247 (706)
Q Consensus 236 ----gl~GS~~f~~~~ 247 (706)
++.||+.+++++
T Consensus 131 ~~~~~~~Gs~~~~~~~ 146 (412)
T PRK12892 131 RFTPGFLGSRAYAGRL 146 (412)
T ss_pred cccCccccHHHHHcCC
Confidence 468999998543
No 18
>PRK07473 carboxypeptidase; Provisional
Probab=99.41 E-value=5.5e-12 Score=139.16 Aligned_cols=149 Identities=18% Similarity=0.210 Sum_probs=112.9
Q ss_pred CCHHHHHHHHHHHHcCCCCCCCCHH-HHHHHHHHHHHHHhhccccCCcceEEEEeeeccCCCcccccccccCcccccccc
Q 005255 84 FSELEAMKHVKALTQLGPHAVGSDA-LDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYSDL 162 (706)
Q Consensus 84 fs~erA~~~L~~L~~igpR~~gS~~-~~~a~~yL~~~l~~ig~~~~~~~~vevd~f~~~~g~~~~~g~~~~~~~~~y~~~ 162 (706)
++.+++.+.|++|++|... .+.++ ..+..+|+.++|+++|. +++.+ ....+ ..
T Consensus 8 ~~~~~~~~~l~~Lv~i~S~-s~~~~~~~~~~~~l~~~l~~~G~------~~~~~--~~~~~-----------------~~ 61 (376)
T PRK07473 8 FDSEAMLAGLRPWVECESP-TWDAAAVNRMLDLAARDMAIMGA------TIERI--PGRQG-----------------FG 61 (376)
T ss_pred cCHHHHHHHHHHHhcCCCC-CCCHHHHHHHHHHHHHHHHHcCC------eEEEe--cCCCC-----------------CC
Confidence 5688999999999998543 34433 35788999999999983 44432 11000 13
Q ss_pred ceEEEEEcCCCCCCCCCCeEEEeecccccCC-----------------CCCCCCChhHHHHHHHHHHHHHhcCCCCCCcE
Q 005255 163 NHIVLRILPKYASEAGENAILVSSHIDTVSA-----------------GEGAGDCSSCVAVMLELARVMSQWAHEFKNAV 225 (706)
Q Consensus 163 ~NVi~~i~g~~~~~~~~~~Vll~aH~DSv~~-----------------~pGA~Dd~sgva~~LE~ar~L~~~~~~p~~~I 225 (706)
.|+++++++. ....+.|++++|+|+||. ++|+.|+++|++++|++++.|.+.+.+++.+|
T Consensus 62 ~~~~~~~~~~---~~~~~~lll~gH~DtV~~~~~~~~~p~~~~~g~lyGrG~~D~Kgglaa~l~A~~~l~~~~~~~~~~v 138 (376)
T PRK07473 62 DCVRARFPHP---RQGEPGILIAGHMDTVHPVGTLEKLPWRREGNKCYGPGILDMKGGNYLALEAIRQLARAGITTPLPI 138 (376)
T ss_pred CeEEEEeCCC---CCCCCeEEEEecCCCCCCCCCccCCCeEEECCEEEcCchhhchHHHHHHHHHHHHHHHcCCCCCCCE
Confidence 5899988643 124578999999999952 48999999999999999999988765666789
Q ss_pred EEEEeCCCCCCCcChHHHHhcCCccCCceEEEEeecCc
Q 005255 226 IFLFNTGEEEGLNGAHSFVTQHPWSTTIRVAVDLEAMG 263 (706)
Q Consensus 226 ~flf~~~EE~gl~GS~~f~~~~~~~~~v~a~iNLD~~G 263 (706)
.|+|..+||.|..|++.+++++.. ...++|..|..+
T Consensus 139 ~~~~~~dEE~g~~g~~~~~~~~~~--~~d~~iv~ep~~ 174 (376)
T PRK07473 139 TVLFTPDEEVGTPSTRDLIEAEAA--RNKYVLVPEPGR 174 (376)
T ss_pred EEEEeCCcccCCccHHHHHHHhhc--cCCEEEEeCCCC
Confidence 999999999999999999965432 346778888654
No 19
>PRK12893 allantoate amidohydrolase; Reviewed
Probab=99.41 E-value=2.9e-12 Score=142.56 Aligned_cols=130 Identities=19% Similarity=0.215 Sum_probs=107.0
Q ss_pred CCHHHHHHHHHHHHcCCC-------CCCCCHHHHHHHHHHHHHHHhhccccCCcceEEEEeeeccCCCcccccccccCcc
Q 005255 84 FSELEAMKHVKALTQLGP-------HAVGSDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKT 156 (706)
Q Consensus 84 fs~erA~~~L~~L~~igp-------R~~gS~~~~~a~~yL~~~l~~ig~~~~~~~~vevd~f~~~~g~~~~~g~~~~~~~ 156 (706)
.+.++++++|++|+++.+ |..+|.++.++.+||.++|++.|. +++++
T Consensus 7 ~~~~~~~~~l~~l~~i~s~~~~~~~~~~~s~~e~~~~~~l~~~l~~~G~------~~~~~-------------------- 60 (412)
T PRK12893 7 INGERLWDSLMALARIGATPGGGVTRLALTDEDREARDLLAQWMEEAGL------TVSVD-------------------- 60 (412)
T ss_pred cCHHHHHHHHHHHhcccCCCCCcEEeccCCHHHHHHHHHHHHHHHHcCC------EEEEc--------------------
Confidence 467899999999999863 344577788999999999999983 44432
Q ss_pred ccccccceEEEEEcCCCCCCCCCCeEEEeecccccCCCCCCCCChhHHHHHHHHHHHHHhcCCCCCCcEEEEEeCCCCCC
Q 005255 157 LIYSDLNHIVLRILPKYASEAGENAILVSSHIDTVSAGEGAGDCSSCVAVMLELARVMSQWAHEFKNAVIFLFNTGEEEG 236 (706)
Q Consensus 157 ~~y~~~~NVi~~i~g~~~~~~~~~~Vll~aH~DSv~~~pGA~Dd~sgva~~LE~ar~L~~~~~~p~~~I~flf~~~EE~g 236 (706)
...|++++++|. .++.+.|++++|+|+||. .|..|++.|++++|++++.|.+.+.+++++|.|+|+.+||.|
T Consensus 61 ----~~~n~~a~~~g~---~~~~~~l~l~~H~DtVp~-~g~~dgk~gvaa~l~a~~~l~~~~~~~~~~v~~~~~~dEE~g 132 (412)
T PRK12893 61 ----AIGNLFGRRAGT---DPDAPPVLIGSHLDTQPT-GGRFDGALGVLAALEVVRTLNDAGIRTRRPIEVVSWTNEEGA 132 (412)
T ss_pred ----CCCcEEEEeCCC---CCCCCEEEEEecccCCCC-CCcccchhhHHHHHHHHHHHHHcCCCCCCCeEEEEEcccccc
Confidence 235999999764 123578999999999984 567899999999999999999887778999999999999986
Q ss_pred -----CcChHHHHhcC
Q 005255 237 -----LNGAHSFVTQH 247 (706)
Q Consensus 237 -----l~GS~~f~~~~ 247 (706)
+.|+..+.+++
T Consensus 133 ~~~~~~~G~~~~~~~~ 148 (412)
T PRK12893 133 RFAPAMLGSGVFTGAL 148 (412)
T ss_pred ccccccccHHHHhCcC
Confidence 78999888543
No 20
>PRK08596 acetylornithine deacetylase; Validated
Probab=99.41 E-value=5.4e-12 Score=141.07 Aligned_cols=144 Identities=17% Similarity=0.187 Sum_probs=110.3
Q ss_pred HHHHHHHHHHHcCCCCCCCC-HHHHHHHHHHHHHHHhhccccCCcceEEEEeeeccCCCcccccccccCccccccccceE
Q 005255 87 LEAMKHVKALTQLGPHAVGS-DALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYSDLNHI 165 (706)
Q Consensus 87 erA~~~L~~L~~igpR~~gS-~~~~~a~~yL~~~l~~ig~~~~~~~~vevd~f~~~~g~~~~~g~~~~~~~~~y~~~~NV 165 (706)
+++.+.+++|.+|.. +.+. .++.++.+||.++|+++|. +++.+. .. ....|+
T Consensus 13 ~~~~~~l~~Lv~i~S-~s~~~~~e~~~a~~l~~~l~~~G~------~~~~~~--~~------------------~~~~nv 65 (421)
T PRK08596 13 DELLELLKTLVRFET-PAPPARNTNEAQEFIAEFLRKLGF------SVDKWD--VY------------------PNDPNV 65 (421)
T ss_pred HHHHHHHHHHhcCCC-CCCCchhHHHHHHHHHHHHHHCCC------eEEEEE--cc------------------CCCceE
Confidence 678899999998743 2222 3456789999999999983 444321 10 124799
Q ss_pred EEEEcCCCCCCCCCCeEEEeecccccCC---------------------CCCCCCChhHHHHHHHHHHHHHhcCCCCCCc
Q 005255 166 VLRILPKYASEAGENAILVSSHIDTVSA---------------------GEGAGDCSSCVAVMLELARVMSQWAHEFKNA 224 (706)
Q Consensus 166 i~~i~g~~~~~~~~~~Vll~aH~DSv~~---------------------~pGA~Dd~sgva~~LE~ar~L~~~~~~p~~~ 224 (706)
+++++|+. ....+.|++++|+|+||. ++|+.||++|++++|++++.|.+.+.+++.+
T Consensus 66 ia~~~g~~--~~~~~~lll~~H~DtVp~~~~~~W~~~Pf~~~~~~g~lyGrG~~D~Kgg~a~~l~a~~~l~~~~~~~~~~ 143 (421)
T PRK08596 66 VGVKKGTE--SDAYKSLIINGHMDVAEVSADEAWETNPFEPTIKDGWLYGRGAADMKGGLAGALFAIQLLHEAGIELPGD 143 (421)
T ss_pred EEEecCCC--CCCCcEEEEeccccccCCCCccccccCCCCcEEECCEEEeccccccchHHHHHHHHHHHHHHcCCCCCCc
Confidence 99997641 112357999999999874 3899999999999999999999887778899
Q ss_pred EEEEEeCCCCCCCcChHHHHhcCCccCCceEEEEeecC
Q 005255 225 VIFLFNTGEEEGLNGAHSFVTQHPWSTTIRVAVDLEAM 262 (706)
Q Consensus 225 I~flf~~~EE~gl~GS~~f~~~~~~~~~v~a~iNLD~~ 262 (706)
|.|+|..+||.|..|++.++++.. ....+++.|..
T Consensus 144 v~~~~~~dEE~g~~G~~~~~~~~~---~~d~~i~~ep~ 178 (421)
T PRK08596 144 LIFQSVIGEEVGEAGTLQCCERGY---DADFAVVVDTS 178 (421)
T ss_pred EEEEEEeccccCCcCHHHHHhcCC---CCCEEEECCCC
Confidence 999999999999999999986543 34667777754
No 21
>TIGR01910 DapE-ArgE acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase. This group of sequences contains annotations for both acetylornithine deacetylase and succinyl-diaminopimelate desuccinylase, but does not contain any members with experimental characterization. Bacillus, Staphylococcus and Sulfolobus species contain multiple hits to this subfamily and each may have a separate activity. Determining which is which must await further laboratory research.
Probab=99.37 E-value=7.2e-12 Score=137.67 Aligned_cols=146 Identities=16% Similarity=0.195 Sum_probs=106.9
Q ss_pred HHHHHHHcCCCCCCCCHHHHHHHHHHHHHHHhhccccCCcceEEEEeeeccCCCcccccccccCccccccccceEEEEEc
Q 005255 91 KHVKALTQLGPHAVGSDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYSDLNHIVLRIL 170 (706)
Q Consensus 91 ~~L~~L~~igpR~~gS~~~~~a~~yL~~~l~~ig~~~~~~~~vevd~f~~~~g~~~~~g~~~~~~~~~y~~~~NVi~~i~ 170 (706)
+.|++|.++..-...+.++.++++||.++|+++|. +++... ...+. .....|+++.+.
T Consensus 2 ~~l~~lv~i~s~~~~~~~e~~~a~~l~~~l~~~G~------~~~~~~--~~~~~--------------~~~~~~~~~~~~ 59 (375)
T TIGR01910 2 ELLKDLISIPSVNPPGGNEETIANYIKDLLREFGF------STDVIE--ITDDR--------------LKVLGKVVVKEP 59 (375)
T ss_pred hhHHhhhcCCCCCCCCcCHHHHHHHHHHHHHHCCC------ceEEEe--cCchh--------------cccccceEEecc
Confidence 46778888744222455677999999999999984 333321 11000 012246777776
Q ss_pred CCCCCCCCCCeEEEeecccccCCC---------------------CCCCCChhHHHHHHHHHHHHHhcCCCCCCcEEEEE
Q 005255 171 PKYASEAGENAILVSSHIDTVSAG---------------------EGAGDCSSCVAVMLELARVMSQWAHEFKNAVIFLF 229 (706)
Q Consensus 171 g~~~~~~~~~~Vll~aH~DSv~~~---------------------pGA~Dd~sgva~~LE~ar~L~~~~~~p~~~I~flf 229 (706)
|+ .+.+.|++.+|+|+||.. +|+.||++|+|++|++++.|.+.+.+++++|.|+|
T Consensus 60 g~----~~~~~ill~~H~DtVp~~~~~~w~~~Pf~~~~~~g~i~grG~~D~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~ 135 (375)
T TIGR01910 60 GN----GNEKSLIFNGHYDVVPAGDLELWKTDPFKPVEKDGKLYGRGATDMKGGLVALLYALKAIREAGIKPNGNIILQS 135 (375)
T ss_pred CC----CCCCEEEEecccccccCCChhhCcCCCCCcEEECCEEEecCccccchHHHHHHHHHHHHHHcCCCCCccEEEEE
Confidence 53 235789999999999863 68999999999999999999987767889999999
Q ss_pred eCCCCCCCcChHHHHhcCCccCCceEEEEeecCc
Q 005255 230 NTGEEEGLNGAHSFVTQHPWSTTIRVAVDLEAMG 263 (706)
Q Consensus 230 ~~~EE~gl~GS~~f~~~~~~~~~v~a~iNLD~~G 263 (706)
+.+||.|..|++.++++ ...++...++..|..|
T Consensus 136 ~~~EE~g~~G~~~~~~~-~~~~~~d~~i~~~~~~ 168 (375)
T TIGR01910 136 VVDEESGEAGTLYLLQR-GYFKDADGVLIPEPSG 168 (375)
T ss_pred EcCcccCchhHHHHHHc-CCCCCCCEEEECCCCC
Confidence 99999999999999954 2333456677777543
No 22
>PRK08588 succinyl-diaminopimelate desuccinylase; Reviewed
Probab=99.37 E-value=7.5e-12 Score=137.52 Aligned_cols=140 Identities=19% Similarity=0.271 Sum_probs=107.8
Q ss_pred HHHHHHHHHHHHcCCCCCCCCHHHHHHHHHHHHHHHhhccccCCcceEEEEeeeccCCCcccccccccCccccccccceE
Q 005255 86 ELEAMKHVKALTQLGPHAVGSDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYSDLNHI 165 (706)
Q Consensus 86 ~erA~~~L~~L~~igpR~~gS~~~~~a~~yL~~~l~~ig~~~~~~~~vevd~f~~~~g~~~~~g~~~~~~~~~y~~~~NV 165 (706)
++++.+.+++|.++.. + |..+.++.+||.++|+++|. +++.+. .. ....|+
T Consensus 1 ~~~~~~~l~~Lv~i~s-~--s~~e~~~~~~l~~~l~~~G~------~~~~~~--~~------------------~~~~~l 51 (377)
T PRK08588 1 EEEKIQILADIVKINS-V--NDNEIEVANYLQDLFAKHGI------ESKIVK--VN------------------DGRANL 51 (377)
T ss_pred ChHHHHHHHHHhcCCC-C--CCcHHHHHHHHHHHHHHCCC------ceEEEe--cC------------------CCCceE
Confidence 3678899999998733 2 33456899999999999984 344321 10 034699
Q ss_pred EEEEcCCCCCCCCCCeEEEeecccccCC---------------------CCCCCCChhHHHHHHHHHHHHHhcCCCCCCc
Q 005255 166 VLRILPKYASEAGENAILVSSHIDTVSA---------------------GEGAGDCSSCVAVMLELARVMSQWAHEFKNA 224 (706)
Q Consensus 166 i~~i~g~~~~~~~~~~Vll~aH~DSv~~---------------------~pGA~Dd~sgva~~LE~ar~L~~~~~~p~~~ 224 (706)
++++ |. ..+.|++.+|+|+||. ++|+.|++.|++++|++++.|.+.+..++.+
T Consensus 52 ~a~~-g~-----~~~~il~~~H~DtVp~~~~~~w~~~Pf~~~~~~g~l~GrG~~D~Kgg~aa~l~a~~~l~~~~~~~~~~ 125 (377)
T PRK08588 52 VAEI-GS-----GSPVLALSGHMDVVAAGDVDKWTYDPFELTEKDGKLYGRGATDMKSGLAALVIAMIELKEQGQLLNGT 125 (377)
T ss_pred EEEe-CC-----CCceEEEEeeecccCCCCcccCcCCCCCeEEECCEEEecCcccccchHHHHHHHHHHHHHcCCCCCCc
Confidence 9988 32 1268999999999985 3789999999999999999998887778899
Q ss_pred EEEEEeCCCCCCCcChHHHHhcCCccCCceEEEEeec
Q 005255 225 VIFLFNTGEEEGLNGAHSFVTQHPWSTTIRVAVDLEA 261 (706)
Q Consensus 225 I~flf~~~EE~gl~GS~~f~~~~~~~~~v~a~iNLD~ 261 (706)
|.|+|..+||.|..|++.++++ ...++...++..|.
T Consensus 126 i~l~~~~dEE~g~~G~~~~~~~-~~~~~~d~~i~~ep 161 (377)
T PRK08588 126 IRLLATAGEEVGELGAKQLTEK-GYADDLDALIIGEP 161 (377)
T ss_pred EEEEEEcccccCchhHHHHHhc-CccCCCCEEEEecC
Confidence 9999999999999999999954 33344555666554
No 23
>PRK07338 hypothetical protein; Provisional
Probab=99.34 E-value=1.7e-11 Score=136.02 Aligned_cols=157 Identities=18% Similarity=0.240 Sum_probs=109.6
Q ss_pred HHHHHHHHHHHHcCCCCCCCC-HHHHHHHHHHHHHHHhhccccCCcceEEEEeeeccCCCcccccccccCccccccccce
Q 005255 86 ELEAMKHVKALTQLGPHAVGS-DALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYSDLNH 164 (706)
Q Consensus 86 ~erA~~~L~~L~~igpR~~gS-~~~~~a~~yL~~~l~~ig~~~~~~~~vevd~f~~~~g~~~~~g~~~~~~~~~y~~~~N 164 (706)
.+++.+.|++|.++.. ..+. ++..++.+||.++|+++|. ++++.. .. +..... ..+....+....|
T Consensus 16 ~~~~~~~l~~lv~i~S-~s~~~~~~~~~~~~l~~~l~~~G~------~~~~~~--~~-~~~~~~---~~~~~~~~~~~~n 82 (402)
T PRK07338 16 QAPMLEQLIAWAAINS-GSRNLDGLARMAELLADAFAALPG------EIELIP--LP-PVEVID---ADGRTLEQAHGPA 82 (402)
T ss_pred HHHHHHHHHHHHhccC-CCCCHHHHHHHHHHHHHHHHhCCC------cEEEec--CC-cccccc---ccccccccCcCCe
Confidence 4677888999988743 2222 3346899999999999984 333321 10 000000 0000001123479
Q ss_pred EEEEEcCCCCCCCCCCeEEEeecccccCC-----------------CCCCCCChhHHHHHHHHHHHHHhcCCCCCCcEEE
Q 005255 165 IVLRILPKYASEAGENAILVSSHIDTVSA-----------------GEGAGDCSSCVAVMLELARVMSQWAHEFKNAVIF 227 (706)
Q Consensus 165 Vi~~i~g~~~~~~~~~~Vll~aH~DSv~~-----------------~pGA~Dd~sgva~~LE~ar~L~~~~~~p~~~I~f 227 (706)
++++++|+ .++.|++++|+|+||. ++|+.|+|+|++++|++++.|.+.+.+++.+|.|
T Consensus 83 l~a~~~~~-----~~~~lll~gH~DvVp~~~~Pf~~~~~~~~g~lyGrG~~DmKgg~aa~l~a~~~l~~~~~~~~~~i~~ 157 (402)
T PRK07338 83 LHVSVRPE-----APRQVLLTGHMDTVFPADHPFQTLSWLDDGTLNGPGVADMKGGIVVMLAALLAFERSPLADKLGYDV 157 (402)
T ss_pred EEEEECCC-----CCccEEEEeecCccCCCCCcccCCeEeeCCEEECCcHHhhhHHHHHHHHHHHHHHhcCCCCCCCEEE
Confidence 99998643 2246999999999974 3789999999999999999998876667789999
Q ss_pred EEeCCCCCCCcChHHHHhcCCccCCceEEEEeecC
Q 005255 228 LFNTGEEEGLNGAHSFVTQHPWSTTIRVAVDLEAM 262 (706)
Q Consensus 228 lf~~~EE~gl~GS~~f~~~~~~~~~v~a~iNLD~~ 262 (706)
+|..+||.|..|++.+++++.. +..+.+.+|..
T Consensus 158 ~~~~dEE~g~~g~~~~~~~~~~--~~~~~i~~ep~ 190 (402)
T PRK07338 158 LINPDEEIGSPASAPLLAELAR--GKHAALTYEPA 190 (402)
T ss_pred EEECCcccCChhhHHHHHHHhc--cCcEEEEecCC
Confidence 9999999999999999876542 34566777764
No 24
>PRK07906 hypothetical protein; Provisional
Probab=99.34 E-value=8.9e-12 Score=139.37 Aligned_cols=130 Identities=25% Similarity=0.351 Sum_probs=100.9
Q ss_pred HHHHHHHHcCCCCCC---CCHHHHHHHHHHHHHHHhhccccCCcceEEEEeeeccCCCcccccccccCccccccccceEE
Q 005255 90 MKHVKALTQLGPHAV---GSDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYSDLNHIV 166 (706)
Q Consensus 90 ~~~L~~L~~igpR~~---gS~~~~~a~~yL~~~l~~ig~~~~~~~~vevd~f~~~~g~~~~~g~~~~~~~~~y~~~~NVi 166 (706)
.+.|++|.+|..-.. ..+++.++++||.++++++|. +++.+. .. .+..|++
T Consensus 2 ~~ll~~Lv~i~S~s~~~~~~~~e~~~~~~l~~~l~~~G~------~~~~~~--~~------------------~~~~nv~ 55 (426)
T PRK07906 2 VDLCSELIRIDTTNTGDGTGKGEREAAEYVAEKLAEVGL------EPTYLE--SA------------------PGRANVV 55 (426)
T ss_pred hHHHHHHhcccccCCCCCCCchHHHHHHHHHHHHHhCCC------CeEEee--cC------------------CCceEEE
Confidence 467888888754221 225567899999999999984 344321 10 1357999
Q ss_pred EEEcCCCCCCCCCCeEEEeecccccCC--------------------CCCCCCChhHHHHHHHHHHHHHhcCCCCCCcEE
Q 005255 167 LRILPKYASEAGENAILVSSHIDTVSA--------------------GEGAGDCSSCVAVMLELARVMSQWAHEFKNAVI 226 (706)
Q Consensus 167 ~~i~g~~~~~~~~~~Vll~aH~DSv~~--------------------~pGA~Dd~sgva~~LE~ar~L~~~~~~p~~~I~ 226 (706)
++++|+ ++..+.|++++|+|+||. ++|+.||++|++++|++++.|.+.+..++++|.
T Consensus 56 ~~~~g~---~~~~~~lll~~H~DtVp~~~~~W~~~Pf~~~~~dg~iyGrG~~D~Kg~~a~~l~a~~~l~~~~~~~~~~i~ 132 (426)
T PRK07906 56 ARLPGA---DPSRPALLVHGHLDVVPAEAADWSVHPFSGEIRDGYVWGRGAVDMKDMDAMMLAVVRHLARTGRRPPRDLV 132 (426)
T ss_pred EEEeCC---CCCCCcEEEEcccccCCCCcccCccCCCCceeeCCEEEecCccccchHHHHHHHHHHHHHHcCCCCCccEE
Confidence 999764 234468999999999985 389999999999999999999988778899999
Q ss_pred EEEeCCCCCCC-cChHHHHhcCC
Q 005255 227 FLFNTGEEEGL-NGAHSFVTQHP 248 (706)
Q Consensus 227 flf~~~EE~gl-~GS~~f~~~~~ 248 (706)
|+|+.+||.|. .|++.+.++++
T Consensus 133 ~~~~~dEE~g~~~g~~~l~~~~~ 155 (426)
T PRK07906 133 FAFVADEEAGGTYGAHWLVDNHP 155 (426)
T ss_pred EEEecCcccchhhhHHHHHHHHH
Confidence 99999999965 69999986543
No 25
>PRK06446 hypothetical protein; Provisional
Probab=99.32 E-value=2.1e-11 Score=136.98 Aligned_cols=129 Identities=14% Similarity=0.221 Sum_probs=100.0
Q ss_pred HHHHHHHHHHHcCCCCCCCCHHHHHHHHHHHHHHHhhccccCCcceEEEEeeeccCCCcccccccccCccccccccceEE
Q 005255 87 LEAMKHVKALTQLGPHAVGSDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYSDLNHIV 166 (706)
Q Consensus 87 erA~~~L~~L~~igpR~~gS~~~~~a~~yL~~~l~~ig~~~~~~~~vevd~f~~~~g~~~~~g~~~~~~~~~y~~~~NVi 166 (706)
+++.+.|++|.+|.+-..+.++..++.+||.++|+++|. +++.+ +. .+..|++
T Consensus 2 ~~~~~~l~eLV~i~S~s~~~~~~~~~a~~l~~~l~~~G~------~ve~~--~~-------------------~~~~~li 54 (436)
T PRK06446 2 DEELYTLIEFLKKPSISATGEGIEETANYLKDTMEKLGI------KANIE--RT-------------------KGHPVVY 54 (436)
T ss_pred hhHHHHHHHHhCCCCCCCCcHhHHHHHHHHHHHHHHCCC------eEEEE--ec-------------------CCCCEEE
Confidence 467889999999854321112336899999999999983 44432 11 0247899
Q ss_pred EEEcCCCCCCCCCCeEEEeecccccCC---------------------CCCCCCChhHHHHHHHHHHHHHhcCCCCCCcE
Q 005255 167 LRILPKYASEAGENAILVSSHIDTVSA---------------------GEGAGDCSSCVAVMLELARVMSQWAHEFKNAV 225 (706)
Q Consensus 167 ~~i~g~~~~~~~~~~Vll~aH~DSv~~---------------------~pGA~Dd~sgva~~LE~ar~L~~~~~~p~~~I 225 (706)
+++++. +.+.|++++|+|+||. ++|+.|||+|++++|.+++.+.+.+ .++.+|
T Consensus 55 a~~~~~-----~~~~vll~gH~DvVp~~~~~~W~~~Pf~~~~~dg~lyGRGa~DmKgglaa~l~A~~~l~~~~-~~~~~i 128 (436)
T PRK06446 55 GEINVG-----AKKTLLIYNHYDVQPVDPLSEWKRDPFSATIENGRIYARGASDNKGTLMARLFAIKHLIDKH-KLNVNV 128 (436)
T ss_pred EEecCC-----CCCEEEEEecccCCCCCccccccCCCCceEEECCEEEEEeccCCcHHHHHHHHHHHHHHHcC-CCCCCE
Confidence 998531 3468999999999874 3899999999999999999887654 567899
Q ss_pred EEEEeCCCCCCCcChHHHHhcCC
Q 005255 226 IFLFNTGEEEGLNGAHSFVTQHP 248 (706)
Q Consensus 226 ~flf~~~EE~gl~GS~~f~~~~~ 248 (706)
.|+|..+||.|..|++.+.++++
T Consensus 129 ~~~~~~dEE~g~~g~~~~l~~~~ 151 (436)
T PRK06446 129 KFLYEGEEEIGSPNLEDFIEKNK 151 (436)
T ss_pred EEEEEcccccCCHhHHHHHHHHH
Confidence 99999999999999999997764
No 26
>PRK07907 hypothetical protein; Provisional
Probab=99.31 E-value=3.6e-11 Score=135.58 Aligned_cols=146 Identities=18% Similarity=0.221 Sum_probs=108.4
Q ss_pred CHHHHHHHHHHHHcCCCCCCC---CHHHHHHHHHHHHHHHhhccccCCcceEEEEeeeccCCCcccccccccCccccccc
Q 005255 85 SELEAMKHVKALTQLGPHAVG---SDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYSD 161 (706)
Q Consensus 85 s~erA~~~L~~L~~igpR~~g---S~~~~~a~~yL~~~l~~ig~~~~~~~~vevd~f~~~~g~~~~~g~~~~~~~~~y~~ 161 (706)
..+++.+.|++|.+|..-... ..+..++.+||.++|+++|. .++++. .. ..
T Consensus 16 ~~~~~~~ll~~LV~ipS~s~~~~~~~~~~~~~~~l~~~l~~~g~-----~~~~~~--~~-------------------~~ 69 (449)
T PRK07907 16 LLPRVRADLEELVRIPSVAADPFRREEVARSAEWVADLLREAGF-----DDVRVV--SA-------------------DG 69 (449)
T ss_pred HHHHHHHHHHHHhcCCCCCCCccchhhHHHHHHHHHHHHHHcCC-----ceEEEE--ec-------------------CC
Confidence 356889999999997542211 12345899999999999983 023321 10 13
Q ss_pred cceEEEEEcCCCCCCCCCCeEEEeecccccCC---------------------CCCCCCChhHHHHHHHHHHHHHhcCCC
Q 005255 162 LNHIVLRILPKYASEAGENAILVSSHIDTVSA---------------------GEGAGDCSSCVAVMLELARVMSQWAHE 220 (706)
Q Consensus 162 ~~NVi~~i~g~~~~~~~~~~Vll~aH~DSv~~---------------------~pGA~Dd~sgva~~LE~ar~L~~~~~~ 220 (706)
..|++++++++ ++.+.|++++|+|+||. ++|+.|+++|++++|++++.| . .+
T Consensus 70 ~~nl~a~~~~~----~~~~~lll~gH~DvVp~~~~~~W~~~Pf~~~~~~g~lyGrG~~D~Kg~~aa~l~a~~~l-~--~~ 142 (449)
T PRK07907 70 APAVIGTRPAP----PGAPTVLLYAHHDVQPPGDPDAWDSPPFELTERDGRLYGRGAADDKGGIAMHLAALRAL-G--GD 142 (449)
T ss_pred CCEEEEEecCC----CCCCEEEEEcccCCCCCCCccccCCCCceeEEECCEEEECCccCCcHHHHHHHHHHHHh-c--cC
Confidence 47999999763 23578999999999985 279999999999999999999 3 35
Q ss_pred CCCcEEEEEeCCCCCCCcChHHHHhcCCccCCceEEEEeecCc
Q 005255 221 FKNAVIFLFNTGEEEGLNGAHSFVTQHPWSTTIRVAVDLEAMG 263 (706)
Q Consensus 221 p~~~I~flf~~~EE~gl~GS~~f~~~~~~~~~v~a~iNLD~~G 263 (706)
++++|.|+++++||.|..|++.+++++....+..+++..|..+
T Consensus 143 ~~~~i~~~~~~dEE~g~~g~~~~l~~~~~~~~~d~~iv~E~~~ 185 (449)
T PRK07907 143 LPVGVTVFVEGEEEMGSPSLERLLAEHPDLLAADVIVIADSGN 185 (449)
T ss_pred CCCcEEEEEEcCcccCCccHHHHHHhchHhhcCCEEEEecCCc
Confidence 6789999999999999999999997654333446677666543
No 27
>PRK09104 hypothetical protein; Validated
Probab=99.31 E-value=3.4e-11 Score=136.34 Aligned_cols=147 Identities=16% Similarity=0.180 Sum_probs=110.5
Q ss_pred CHHHHHHHHHHHHcCCCCCCCC---HHHHHHHHHHHHHHHhhccccCCcceEEEEeeeccCCCcccccccccCccccccc
Q 005255 85 SELEAMKHVKALTQLGPHAVGS---DALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYSD 161 (706)
Q Consensus 85 s~erA~~~L~~L~~igpR~~gS---~~~~~a~~yL~~~l~~ig~~~~~~~~vevd~f~~~~g~~~~~g~~~~~~~~~y~~ 161 (706)
..+++.+.|++|.+|..-..+. .+..++.+||.++|+++|. ++++. +. .+
T Consensus 15 ~~~~~~~~L~~lv~i~Svs~~~~~~~~~~~~~~~l~~~l~~~G~------~v~~~--~~-------------------~~ 67 (464)
T PRK09104 15 NLDASLERLFALLRIPSISTDPAYAADCRKAADWLVADLASLGF------EASVR--DT-------------------PG 67 (464)
T ss_pred hHHHHHHHHHHHhcCCCCCCCccchHHHHHHHHHHHHHHHHCCC------eEEEE--ec-------------------CC
Confidence 4678899999999875422111 2235789999999999983 34432 11 02
Q ss_pred cceEEEEEcCCCCCCCCCCeEEEeecccccCC--------------------------CCCCCCChhHHHHHHHHHHHHH
Q 005255 162 LNHIVLRILPKYASEAGENAILVSSHIDTVSA--------------------------GEGAGDCSSCVAVMLELARVMS 215 (706)
Q Consensus 162 ~~NVi~~i~g~~~~~~~~~~Vll~aH~DSv~~--------------------------~pGA~Dd~sgva~~LE~ar~L~ 215 (706)
..||+++++|. ++..+.|++++|+|+||. ++|+.|||.|++++|++++.|.
T Consensus 68 ~~~l~a~~~g~---~~~~~~lll~gH~DvVp~~~~~~W~~~Pf~~~~~~~~~~~~~lyGRG~~D~Kg~laa~l~a~~~l~ 144 (464)
T PRK09104 68 HPMVVAHHEGP---TGDAPHVLFYGHYDVQPVDPLDLWESPPFEPRIKETPDGRKVIVARGASDDKGQLMTFVEACRAWK 144 (464)
T ss_pred CCEEEEEecCC---CCCCCEEEEEecccCCCCCCcccCCCCCCcceEecCcCCcceEEEecccCCcHHHHHHHHHHHHHH
Confidence 36999999763 234678999999999863 2578999999999999999999
Q ss_pred hcCCCCCCcEEEEEeCCCCCCCcChHHHHhcCCccCCceEEEEeec
Q 005255 216 QWAHEFKNAVIFLFNTGEEEGLNGAHSFVTQHPWSTTIRVAVDLEA 261 (706)
Q Consensus 216 ~~~~~p~~~I~flf~~~EE~gl~GS~~f~~~~~~~~~v~a~iNLD~ 261 (706)
+.+..++.+|.|+|.++||.|..|.+.++.+.....+..++|+.|.
T Consensus 145 ~~~~~~~~~i~~~~~~dEE~g~~g~~~~l~~~~~~~~~d~~iv~E~ 190 (464)
T PRK09104 145 AVTGSLPVRVTILFEGEEESGSPSLVPFLEANAEELKADVALVCDT 190 (464)
T ss_pred HhcCCCCCcEEEEEECccccCCccHHHHHHhhHHhcCCCEEEEeCC
Confidence 8665677899999999999999999999865432224577887773
No 28
>TIGR01893 aa-his-dipept aminoacyl-histidine dipeptidase.
Probab=99.31 E-value=2.5e-11 Score=138.04 Aligned_cols=137 Identities=17% Similarity=0.303 Sum_probs=105.3
Q ss_pred HHHHHHHHHHHHcCCCCCCCCHHHHHHHHHHHHHHHhhccccCCcceEEEEeeeccCCCcccccccccCccccccccceE
Q 005255 86 ELEAMKHVKALTQLGPHAVGSDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYSDLNHI 165 (706)
Q Consensus 86 ~erA~~~L~~L~~igpR~~gS~~~~~a~~yL~~~l~~ig~~~~~~~~vevd~f~~~~g~~~~~g~~~~~~~~~y~~~~NV 165 (706)
.+|+++.|++|+++ +++ |.+++++++||.+++++.|. +++.| ...|+
T Consensus 3 ~~~~~~~l~~l~~i-~s~--s~~e~~~~~~l~~~l~~~G~------~~~~~------------------------~~~n~ 49 (477)
T TIGR01893 3 PSRVFKYFEEISKI-PRP--SKNEKEVSNFIVNWAKKLGL------EVKQD------------------------EVGNV 49 (477)
T ss_pred HHHHHHHHHHHHcC-CCC--CccHHHHHHHHHHHHHHcCC------eEEEe------------------------CCCeE
Confidence 57899999999998 555 56667899999999999983 45443 23699
Q ss_pred EEEEcCCCCCCCCCCeEEEeecccccCCC------------------------CCCC---CChhHHHHHHHHHHHHHhcC
Q 005255 166 VLRILPKYASEAGENAILVSSHIDTVSAG------------------------EGAG---DCSSCVAVMLELARVMSQWA 218 (706)
Q Consensus 166 i~~i~g~~~~~~~~~~Vll~aH~DSv~~~------------------------pGA~---Dd~sgva~~LE~ar~L~~~~ 218 (706)
+++++|+.+ .++.+.|++++|+||||.. +|+. |++.|++++|++++. .
T Consensus 50 ~~~~~~~~g-~~~~~~l~l~~HlDtV~~~~~~~~~~w~~~p~~~~~~~~~i~GrG~~lg~D~k~gva~~l~~~~~---~- 124 (477)
T TIGR01893 50 LIRKPATPG-YENHPPIVLQGHMDMVCEKNEDSLHDFEKDPIELIIDGDWLKARGTTLGADNGIGVAMGLAILED---N- 124 (477)
T ss_pred EEEEcCCCC-CCCCCeEEEEeeccccCCCCCCCCCCCCCCCeEEEEeCCEEEECCccccccccHHHHHHHHHHhc---C-
Confidence 999987421 2345789999999999842 5664 999999999999875 2
Q ss_pred CCCCCcEEEEEeCCCCCCCcChHHHHhcCCccCCceEEEEeecCc
Q 005255 219 HEFKNAVIFLFNTGEEEGLNGAHSFVTQHPWSTTIRVAVDLEAMG 263 (706)
Q Consensus 219 ~~p~~~I~flf~~~EE~gl~GS~~f~~~~~~~~~v~a~iNLD~~G 263 (706)
..++++|.++|+.+||.|+.||+.+..+. .....++|.|..+
T Consensus 125 ~~~~~~i~~~~~~dEE~g~~Gs~~l~~~~---~~~~~~~~~d~~~ 166 (477)
T TIGR01893 125 NLKHPPLELLFTVDEETGMDGALGLDENW---LSGKILINIDSEE 166 (477)
T ss_pred CCCCCCEEEEEEeccccCchhhhhcChhh---cCCcEEEEecCCC
Confidence 23567999999999999999999997422 2336688888643
No 29
>PRK13013 succinyl-diaminopimelate desuccinylase; Reviewed
Probab=99.30 E-value=5e-11 Score=133.17 Aligned_cols=153 Identities=16% Similarity=0.137 Sum_probs=107.4
Q ss_pred HHHHHHHHHHHHcCCCCC-CCCHHHHHHHHHHHHHHHhhccccCCcceEEEEeeeccCCCcccccccccCccccccccce
Q 005255 86 ELEAMKHVKALTQLGPHA-VGSDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYSDLNH 164 (706)
Q Consensus 86 ~erA~~~L~~L~~igpR~-~gS~~~~~a~~yL~~~l~~ig~~~~~~~~vevd~f~~~~g~~~~~g~~~~~~~~~y~~~~N 164 (706)
.+++.+.+++|.++..-. .| .++.++.+||.++|+++|. +++.+......+ . ..+....|
T Consensus 13 ~~~~~~~l~~Lv~i~S~~~~g-~~e~~~~~~l~~~l~~~G~------~~~~~~~~~~~~-----------~-~~~~~~~n 73 (427)
T PRK13013 13 RDDLVALTQDLIRIPTLNPPG-RAYREICEFLAARLAPRGF------EVELIRAEGAPG-----------D-SETYPRWN 73 (427)
T ss_pred HHHHHHHHHHHhcCCCcCCCC-ccHHHHHHHHHHHHHHCCC------ceEEEecCCCCc-----------c-cccCCcce
Confidence 467888999999874321 12 2346899999999999984 344321100000 0 01223579
Q ss_pred EEEEEcCCCCCCCCCCeEEEeecccccCC-------------------CCCCCCChhHHHHHHHHHHHHHhcCCCCCCcE
Q 005255 165 IVLRILPKYASEAGENAILVSSHIDTVSA-------------------GEGAGDCSSCVAVMLELARVMSQWAHEFKNAV 225 (706)
Q Consensus 165 Vi~~i~g~~~~~~~~~~Vll~aH~DSv~~-------------------~pGA~Dd~sgva~~LE~ar~L~~~~~~p~~~I 225 (706)
++++++|+ .+++.|++.+|+|+||. ++|+.|+++|++++|.+++.|.+.+.+++++|
T Consensus 74 lia~~~g~----~~~~~i~l~gH~DvVp~~~~W~~~Pf~~~~~dg~iyGrGa~D~Kg~~aa~l~a~~~l~~~~~~~~~~v 149 (427)
T PRK13013 74 LVARRQGA----RDGDCVHFNSHHDVVEVGHGWTRDPFGGEVKDGRIYGRGACDMKGGLAASIIAAEAFLAVYPDFAGSI 149 (427)
T ss_pred EEEEecCC----CCCCEEEEEeccccCCCCCCCcCCCCCceEECCEEEeccccccchHHHHHHHHHHHHHHhCCCCCccE
Confidence 99999764 23468999999999984 37999999999999999999998777778899
Q ss_pred EEEEeCCCCCCCc-ChHHHHhcCCccC--CceEEEEeecC
Q 005255 226 IFLFNTGEEEGLN-GAHSFVTQHPWST--TIRVAVDLEAM 262 (706)
Q Consensus 226 ~flf~~~EE~gl~-GS~~f~~~~~~~~--~v~a~iNLD~~ 262 (706)
.|+|..+||.|.. |.+.+. +....+ +..++|..|..
T Consensus 150 ~~~~~~dEE~g~~~g~~~l~-~~~~~~~~~~d~~i~~ep~ 188 (427)
T PRK13013 150 EISGTADEESGGFGGVAYLA-EQGRFSPDRVQHVIIPEPL 188 (427)
T ss_pred EEEEEeccccCChhHHHHHH-hcCCccccCCCEEEEecCC
Confidence 9999999999876 445554 333222 44666666644
No 30
>TIGR01880 Ac-peptdase-euk N-acyl-L-amino-acid amidohydrolase. This model represents a family of eukaryotic N-acyl-L-amino-acid amidohydrolases active on fatty acid and acetyl amides of L-amino acids.
Probab=99.30 E-value=3.9e-11 Score=133.06 Aligned_cols=147 Identities=17% Similarity=0.224 Sum_probs=110.2
Q ss_pred CCCHHHHHHHHHHHHcCCCCCCCCHHHHHHHHHHHHHHHhhccccCCcceEEEEeeeccCCCcccccccccCcccccccc
Q 005255 83 GFSELEAMKHVKALTQLGPHAVGSDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYSDL 162 (706)
Q Consensus 83 ~fs~erA~~~L~~L~~igpR~~gS~~~~~a~~yL~~~l~~ig~~~~~~~~vevd~f~~~~g~~~~~g~~~~~~~~~y~~~ 162 (706)
+.-.+++.+.|++|.+|.... ++.++.++.+||.++|+++|. +++.. ... ...
T Consensus 5 ~~~~~~~~~~l~~lv~ipS~~-~~~~~~~~~~~l~~~l~~~G~------~~~~~--~~~------------------~g~ 57 (400)
T TIGR01880 5 KWEEDIAVTRFREYLRINTVQ-PNPDYAACVDFLIKQADELGL------ARKTI--EFV------------------PGK 57 (400)
T ss_pred ccchHHHHHHHHHHhccCccC-CCccHHHHHHHHHHHHHhCCC------ceeEE--Eec------------------CCc
Confidence 466789999999999985432 333356899999999999984 33221 110 024
Q ss_pred ceEEEEEcCCCCCCCCCCeEEEeecccccCC---------------------CCCCCCChhHHHHHHHHHHHHHhcCCCC
Q 005255 163 NHIVLRILPKYASEAGENAILVSSHIDTVSA---------------------GEGAGDCSSCVAVMLELARVMSQWAHEF 221 (706)
Q Consensus 163 ~NVi~~i~g~~~~~~~~~~Vll~aH~DSv~~---------------------~pGA~Dd~sgva~~LE~ar~L~~~~~~p 221 (706)
.|++++++|+ +...+.|++++|+|+||. ++|+.|++++++++|++++.|.+.+.++
T Consensus 58 ~~l~~~~~g~---~~~~~~i~l~~H~DvVp~~~~~W~~~Pf~~~~~~dg~iyGrG~~D~K~~~aa~l~a~~~l~~~~~~~ 134 (400)
T TIGR01880 58 PVVVLTWPGS---NPELPSILLNSHTDVVPVFREHWTHPPFSAFKDEDGNIYARGAQDMKCVGVQYLEAVRNLKASGFKF 134 (400)
T ss_pred eeEEEEEecC---CCCCCeEEEEcccccCCCCcccCccCCccceecCCCeEEEcccccccHHHHHHHHHHHHHHHcCCCC
Confidence 6899999764 123478999999999974 2789999999999999999999887778
Q ss_pred CCcEEEEEeCCCCCCC-cChHHHHhcCCccCCceEEEEee
Q 005255 222 KNAVIFLFNTGEEEGL-NGAHSFVTQHPWSTTIRVAVDLE 260 (706)
Q Consensus 222 ~~~I~flf~~~EE~gl-~GS~~f~~~~~~~~~v~a~iNLD 260 (706)
+++|.|+|..+||.|. .|++.+.++ ...+.++..+.+|
T Consensus 135 ~~~v~l~~~~dEE~g~~~G~~~~~~~-~~~~~~~~~~~~d 173 (400)
T TIGR01880 135 KRTIHISFVPDEEIGGHDGMEKFAKT-DEFKALNLGFALD 173 (400)
T ss_pred CceEEEEEeCCcccCcHhHHHHHHHh-hhccCCceEEEEc
Confidence 8999999999999976 599999854 2223344555554
No 31
>PRK04443 acetyl-lysine deacetylase; Provisional
Probab=99.29 E-value=3.7e-11 Score=130.97 Aligned_cols=134 Identities=22% Similarity=0.249 Sum_probs=103.9
Q ss_pred CHHHHHHHHHHHHcCCCCCCCCHHHHHHHHHHHHHHHhhccccCCcceEEEEeeeccCCCcccccccccCccccccccce
Q 005255 85 SELEAMKHVKALTQLGPHAVGSDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYSDLNH 164 (706)
Q Consensus 85 s~erA~~~L~~L~~igpR~~gS~~~~~a~~yL~~~l~~ig~~~~~~~~vevd~f~~~~g~~~~~g~~~~~~~~~y~~~~N 164 (706)
.++++.+.+++|.++.. + |..+.++.+|+.++|+++|. +++.+ +..|
T Consensus 4 ~~~~~~~~l~~Lv~i~s-~--s~~e~~~~~~l~~~l~~~G~------~~~~~------------------------~~~n 50 (348)
T PRK04443 4 SALEARELLKGLVEIPS-P--SGEEAAAAEFLVEFMESHGR------EAWVD------------------------EAGN 50 (348)
T ss_pred chHHHHHHHHHHHcCCC-C--CCChHHHHHHHHHHHHHcCC------EEEEc------------------------CCCc
Confidence 46789999999999743 2 34456899999999999983 34432 2368
Q ss_pred EEEEEcCCCCCCCCCCeEEEeecccccCC------------CCCCCCChhHHHHHHHHHHHHHhcCCCCCCcEEEEEeCC
Q 005255 165 IVLRILPKYASEAGENAILVSSHIDTVSA------------GEGAGDCSSCVAVMLELARVMSQWAHEFKNAVIFLFNTG 232 (706)
Q Consensus 165 Vi~~i~g~~~~~~~~~~Vll~aH~DSv~~------------~pGA~Dd~sgva~~LE~ar~L~~~~~~p~~~I~flf~~~ 232 (706)
+++++.+ ..+.|++++|+|+||. ++|+.|+++|+++++++++.| + .+++++|.|++..+
T Consensus 51 ~i~~~~~------~~~~l~~~~H~DtVp~~~p~~~~~g~iyGrG~~D~Kg~~aa~l~A~~~l-~--~~~~~~i~~~~~~d 121 (348)
T PRK04443 51 ARGPAGD------GPPLVLLLGHIDTVPGDIPVRVEDGVLWGRGSVDAKGPLAAFAAAAARL-E--ALVRARVSFVGAVE 121 (348)
T ss_pred EEEEcCC------CCCEEEEEeeccccCCCCCcEeeCCeEEeecccccccHHHHHHHHHHHh-c--ccCCCCEEEEEEcc
Confidence 8998732 2368999999999974 489999999999999999999 3 36788999999999
Q ss_pred CCCCCcChHHHHhcCCccCCceEEEEeecCc
Q 005255 233 EEEGLNGAHSFVTQHPWSTTIRVAVDLEAMG 263 (706)
Q Consensus 233 EE~gl~GS~~f~~~~~~~~~v~a~iNLD~~G 263 (706)
||.|..|...+..+.. ...++|+.|..|
T Consensus 122 EE~g~~~~~~~l~~~~---~~d~~iv~Ept~ 149 (348)
T PRK04443 122 EEAPSSGGARLVADRE---RPDAVIIGEPSG 149 (348)
T ss_pred cccCChhHHHHHHhcc---CCCEEEEeCCCC
Confidence 9999887777664432 356677777443
No 32
>PRK13983 diaminopimelate aminotransferase; Provisional
Probab=99.28 E-value=8.3e-11 Score=129.90 Aligned_cols=151 Identities=18% Similarity=0.199 Sum_probs=107.4
Q ss_pred HHHHHHHHHHHcCCCCCCC--CHHHHHHHHHHHHHHHhhccccCCcceEEEEeeeccCCCcccccccccCccccccccce
Q 005255 87 LEAMKHVKALTQLGPHAVG--SDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYSDLNH 164 (706)
Q Consensus 87 erA~~~L~~L~~igpR~~g--S~~~~~a~~yL~~~l~~ig~~~~~~~~vevd~f~~~~g~~~~~g~~~~~~~~~y~~~~N 164 (706)
+++.+.|++|.++..-... -.++.++++||.++|+++|.+ +++... .... . .......|
T Consensus 5 ~~~~~~l~~lv~i~s~s~~~~~~~e~~~~~~l~~~l~~~G~~-----~~~~~~--~~~~--------~----~~~~~~~n 65 (400)
T PRK13983 5 DEMIELLSELIAIPAVNPDFGGEGEKEKAEYLESLLKEYGFD-----EVERYD--APDP--------R----VIEGVRPN 65 (400)
T ss_pred HHHHHHHHHHhCcCCCCCCCCCccHHHHHHHHHHHHHHcCCc-----eEEEEe--cCCc--------c----cccCCCcc
Confidence 5788999999987542211 124568999999999999842 133211 1000 0 00012589
Q ss_pred EEEEEcCCCCCCCCCCeEEEeecccccCC---------------------CCCCCCChhHHHHHHHHHHHHHhcCCCCCC
Q 005255 165 IVLRILPKYASEAGENAILVSSHIDTVSA---------------------GEGAGDCSSCVAVMLELARVMSQWAHEFKN 223 (706)
Q Consensus 165 Vi~~i~g~~~~~~~~~~Vll~aH~DSv~~---------------------~pGA~Dd~sgva~~LE~ar~L~~~~~~p~~ 223 (706)
++++++|. .+.+.|++++|+|+||. ++|+.||+.|++++|++++.|.+.+.++++
T Consensus 66 l~~~~~g~----~~~~~lll~~H~Dtvp~~~~~~W~~~p~~~~~~~g~lyGrG~~D~K~g~~a~l~a~~~l~~~~~~~~~ 141 (400)
T PRK13983 66 IVAKIPGG----DGKRTLWIISHMDVVPPGDLSLWETDPFKPVVKDGKIYGRGSEDNGQGIVSSLLALKALMDLGIRPKY 141 (400)
T ss_pred EEEEecCC----CCCCeEEEEeeccccCCCCcccccCCCCcceeeCCEEEecCccCccchHHHHHHHHHHHHHhCCCCCC
Confidence 99999764 23358999999999985 378999999999999999999987777889
Q ss_pred cEEEEEeCCCCCCCc-ChHHHHhcCCc-cCCceEEEEee
Q 005255 224 AVIFLFNTGEEEGLN-GAHSFVTQHPW-STTIRVAVDLE 260 (706)
Q Consensus 224 ~I~flf~~~EE~gl~-GS~~f~~~~~~-~~~v~a~iNLD 260 (706)
+|.|+|..+||.|.. |++.+.++++. .....+++..|
T Consensus 142 ~v~~~~~~dEE~g~~~g~~~~~~~~~~~~~~~d~~i~~~ 180 (400)
T PRK13983 142 NLGLAFVSDEETGSKYGIQYLLKKHPELFKKDDLILVPD 180 (400)
T ss_pred cEEEEEEeccccCCcccHHHHHhhcccccCCCCEEEEec
Confidence 999999999999885 89998865432 22344455444
No 33
>PRK08201 hypothetical protein; Provisional
Probab=99.27 E-value=7.1e-11 Score=133.43 Aligned_cols=148 Identities=17% Similarity=0.190 Sum_probs=108.9
Q ss_pred CHHHHHHHHHHHHcCCCCCCC---CHHHHHHHHHHHHHHHhhccccCCcceEEEEeeeccCCCcccccccccCccccccc
Q 005255 85 SELEAMKHVKALTQLGPHAVG---SDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYSD 161 (706)
Q Consensus 85 s~erA~~~L~~L~~igpR~~g---S~~~~~a~~yL~~~l~~ig~~~~~~~~vevd~f~~~~g~~~~~g~~~~~~~~~y~~ 161 (706)
..+++.+.|++|.+|.+-..+ ..++.++.+||.++|+++|.+ .++++. . .+
T Consensus 12 ~~~~~~~~l~~LV~i~Svs~~~~~~~~~~~~a~~l~~~l~~~G~~-----~~~~~~--~-------------------~~ 65 (456)
T PRK08201 12 RREAHLEELKEFLRIPSISALSEHKEDVRKAAEWLAGALEKAGLE-----HVEIME--T-------------------AG 65 (456)
T ss_pred HHHHHHHHHHHHhcCCCCCCCCcchHHHHHHHHHHHHHHHHcCCC-----eEEEEe--c-------------------CC
Confidence 347788999999988553221 123457899999999999831 133321 0 02
Q ss_pred cceEEEEEcCCCCCCCCCCeEEEeecccccCC---------------------CCCCCCChhHHHHHHHHHHHHHhcCCC
Q 005255 162 LNHIVLRILPKYASEAGENAILVSSHIDTVSA---------------------GEGAGDCSSCVAVMLELARVMSQWAHE 220 (706)
Q Consensus 162 ~~NVi~~i~g~~~~~~~~~~Vll~aH~DSv~~---------------------~pGA~Dd~sgva~~LE~ar~L~~~~~~ 220 (706)
..|+++++.|. ++.+.|++++|+|+||. ++|+.|+|+|+|+++++++.|.+.+..
T Consensus 66 ~~~l~a~~~~~----~~~~~lll~gH~DvVp~~~~~~W~~dPf~~~~~~g~lyGRG~~DmKgglaa~l~a~~~l~~~~~~ 141 (456)
T PRK08201 66 HPIVYADWLHA----PGKPTVLIYGHYDVQPVDPLNLWETPPFEPTIRDGKLYARGASDDKGQVFMHLKAVEALLKVEGT 141 (456)
T ss_pred CCEEEEEecCC----CCCCEEEEEeccCCcCCCchhcccCCCCceEeECCEEEEEecccCcHHHHHHHHHHHHHHHhcCC
Confidence 36899988653 23578999999999874 389999999999999999999876556
Q ss_pred CCCcEEEEEeCCCCCCCcChHHHHhcCCccCCceEEEEeecC
Q 005255 221 FKNAVIFLFNTGEEEGLNGAHSFVTQHPWSTTIRVAVDLEAM 262 (706)
Q Consensus 221 p~~~I~flf~~~EE~gl~GS~~f~~~~~~~~~v~a~iNLD~~ 262 (706)
++++|.|++..+||.|..|+..++++++..-+..++|+.|..
T Consensus 142 ~~~~i~~~~~~dEE~g~~g~~~~l~~~~~~~~~d~~ii~e~~ 183 (456)
T PRK08201 142 LPVNVKFCIEGEEEIGSPNLDSFVEEEKDKLAADVVLISDTT 183 (456)
T ss_pred CCCCEEEEEEcccccCCccHHHHHHhhHHhccCCEEEEeCCC
Confidence 678999999999999999999998765322123566766644
No 34
>PRK07079 hypothetical protein; Provisional
Probab=99.26 E-value=8.1e-11 Score=133.52 Aligned_cols=149 Identities=15% Similarity=0.141 Sum_probs=105.0
Q ss_pred CCHHHHHHHHHHHHcCCCCCCCC-HHHHHHHHHH----HHHHHhhccccCCcceEEEEeeeccCCCcccccccccCcccc
Q 005255 84 FSELEAMKHVKALTQLGPHAVGS-DALDRALQYV----LAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLI 158 (706)
Q Consensus 84 fs~erA~~~L~~L~~igpR~~gS-~~~~~a~~yL----~~~l~~ig~~~~~~~~vevd~f~~~~g~~~~~g~~~~~~~~~ 158 (706)
++++++.+.|++|.+|..- .+. .++...++|+ .++|+++|. ++++. ....
T Consensus 14 ~~~~~~~~~L~~LV~ipSv-s~~~~~~~~~~~~l~~~~~~~l~~~G~------~~~~~--~~~~---------------- 68 (469)
T PRK07079 14 FDSGAFFADLARRVAYRTE-SQNPDRAPALRAYLTDEIAPALAALGF------TCRIV--DNPV---------------- 68 (469)
T ss_pred hccHHHHHHHHHHhccCCC-CCCcccHHHHHHHHHHHHHHHHHHCCC------eEEEE--ecCC----------------
Confidence 4556889999999998542 222 2233556565 457777763 33331 1110
Q ss_pred ccccceEEEEEcCCCCCCCCCCeEEEeecccccCC----------------------CCCCCCChhHHHHHHHHHHHHHh
Q 005255 159 YSDLNHIVLRILPKYASEAGENAILVSSHIDTVSA----------------------GEGAGDCSSCVAVMLELARVMSQ 216 (706)
Q Consensus 159 y~~~~NVi~~i~g~~~~~~~~~~Vll~aH~DSv~~----------------------~pGA~Dd~sgva~~LE~ar~L~~ 216 (706)
..+..||++++.+. .+.+.|++++|+|+||. ++|+.|||+|++++|++++.+.+
T Consensus 69 ~~~~~~vva~~~~~----~~~~~lll~gH~DvVp~~~~~W~~~~~Pf~~~~~dg~lyGRGa~DmKgg~aa~l~A~~~l~~ 144 (469)
T PRK07079 69 AGGGPFLIAERIED----DALPTVLIYGHGDVVRGYDEQWREGLSPWTLTEEGDRWYGRGTADNKGQHTINLAALEQVLA 144 (469)
T ss_pred CCCCCEEEEEeCCC----CCCCEEEEEcccCCCCCChHHhcccCCCCcccccCCEEEEEeccCCcHHHHHHHHHHHHHHH
Confidence 01347999988542 23478999999999973 38999999999999999999875
Q ss_pred c-CCCCCCcEEEEEeCCCCCCCcChHHHHhcCCccCCceEEEEeec
Q 005255 217 W-AHEFKNAVIFLFNTGEEEGLNGAHSFVTQHPWSTTIRVAVDLEA 261 (706)
Q Consensus 217 ~-~~~p~~~I~flf~~~EE~gl~GS~~f~~~~~~~~~v~a~iNLD~ 261 (706)
. +.+++++|.|++..+||.|..|++.++++++...+..++|+.|.
T Consensus 145 ~~~~~~~~~i~~~~~~dEE~g~~G~~~l~~~~~~~~~~d~~iv~e~ 190 (469)
T PRK07079 145 ARGGRLGFNVKLLIEMGEEIGSPGLAEVCRQHREALAADVLIASDG 190 (469)
T ss_pred hcCCCCCCCEEEEEECccccCCccHHHHHHHhHHhcCCCEEEEeCC
Confidence 3 35788899999999999999999999987643223455666553
No 35
>PF09940 DUF2172: Domain of unknown function (DUF2172); InterPro: IPR012353 The proteins in this entry are encoded by genes located in polysaccharide biosynthesis gene clusters, and are therefore believed to be involved in polysaccharide biosynthesis. The ste gene cluster (for Streptomyces eps) is involved in exopolysaccharide EPS 139A biosynthesis in Streptomyces sp. 139 []. Members of this group exhibit distant sequence similarity to aminopeptidases (IPR007484 from INTERPRO, MEROPS peptidase family M28).; PDB: 3K9T_A.
Probab=99.25 E-value=1.2e-10 Score=124.96 Aligned_cols=242 Identities=20% Similarity=0.210 Sum_probs=130.7
Q ss_pred CCCHHHHHHHHHHHHc----CCCCCCCCHHHH-HHHHHHHHHHHhhccccCCcceEEEEeeeccCCCcccccccccCccc
Q 005255 83 GFSELEAMKHVKALTQ----LGPHAVGSDALD-RALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTL 157 (706)
Q Consensus 83 ~fs~erA~~~L~~L~~----igpR~~gS~~~~-~a~~yL~~~l~~ig~~~~~~~~vevd~f~~~~g~~~~~g~~~~~~~~ 157 (706)
..+-++..+||..+-+ |..|+..-..+. -... .++++++.+ .+++|.+|.-.. +| .+
T Consensus 56 ~lsl~eL~~Hl~tlp~~PdaIPY~TsYY~~~WGFCl~--~~~~~~L~d---g~Y~V~IdS~l~-~G------------~L 117 (386)
T PF09940_consen 56 TLSLEELKKHLHTLPDQPDAIPYRTSYYKRRWGFCLS--HNQLDALPD---GEYEVVIDSTLE-DG------------SL 117 (386)
T ss_dssp EEEHHHHGGGEE--TTSTT--B--B-SSS----EE----HHHHHT--S---SEEEEEEEEEEE-S-------------EE
T ss_pred EEeHHHHHhhhccCCCCCCccceeeecccCCcccccC--HHHHhhCCC---CceEEEEeeeec-CC------------ce
Confidence 4677888888887754 323432211211 0000 133344432 346677764221 11 22
Q ss_pred cccccceEEEEEcCCCCCCCCCCeEEEeecccccCCCCCCCCChhHHHHHHHHHHHHHhcCCCCCCcEEEEEeCCCCCCC
Q 005255 158 IYSDLNHIVLRILPKYASEAGENAILVSSHIDTVSAGEGAGDCSSCVAVMLELARVMSQWAHEFKNAVIFLFNTGEEEGL 237 (706)
Q Consensus 158 ~y~~~~NVi~~i~g~~~~~~~~~~Vll~aH~DSv~~~pGA~Dd~sgva~~LE~ar~L~~~~~~p~~~I~flf~~~EE~gl 237 (706)
.|.+ ..++|+ .++.|++++|.++.. -|+||.||++++.++++.|++. +.+.+.+|+|.. +-
T Consensus 118 ~ygE-----~~ipG~-----s~~EillsthiCHPs---mANdnLSG~~v~~~La~~L~~~--~~rytYRflf~P----eT 178 (386)
T PF09940_consen 118 TYGE-----FVIPGE-----SDEEILLSTHICHPS---MANDNLSGPAVLTFLAKWLKQL--PNRYTYRFLFVP----ET 178 (386)
T ss_dssp EEEE-----EEE--S-----SS-EEEEEEE----S----TTTTHHHHHHHHHHHHHHTTS----SSEEEEEEE-----TT
T ss_pred eEEE-----EEecCC-----CCCeEEEEEeccCcc---cccccccHHHHHHHHHHHHhcC--CcCceEEEEEcc----cc
Confidence 3333 345664 567899999999984 6999999999999999999986 445999999998 57
Q ss_pred cChHHHHhcCCc-c-CCceEEEEeecCcCCCCccccccCCCHHHHHH-HHHHccCCCCcccccccccCCCCCCCCchHHH
Q 005255 238 NGAHSFVTQHPW-S-TTIRVAVDLEAMGIGGRSALFQAGPNLWAVEN-FAAVAKYPSGQIIGQDLFASGVFETATDFQVY 314 (706)
Q Consensus 238 ~GS~~f~~~~~~-~-~~v~a~iNLD~~G~gg~~~lfq~g~~~~li~~-y~~~a~~p~~~~l~~e~f~~g~ips~TD~~~F 314 (706)
.||-.|..+|.. . +++++.++|+|+|..|.-...++-.....++. ...+.++-... ...+ ...|.++|.++|
T Consensus 179 IGsI~yLskn~~~l~~~v~~G~vLtcvGD~~~~syk~Sr~g~~~iDr~~~~vl~~~~~~---~~~~--~F~~~GsDERQf 253 (386)
T PF09940_consen 179 IGSITYLSKNLDELKKNVKAGLVLTCVGDDGAYSYKRSRRGNTLIDRAAAHVLKHSGPN---FKIY--DFLPRGSDERQF 253 (386)
T ss_dssp HHHHHHHHH-GGGGGG-EEEEEE--S--SSS-EEEE--TTSSSHHHHHHHHHHHHSSS----EEEE-----S-SSTHHHH
T ss_pred HHHHHHHHHCHHHHhhheeeeEEEEEecCCCCcceecCCCCCcHHHHHHHHHHHhcCCC---ceEe--cccccCCCccee
Confidence 899999988864 3 45999999999999775443332112223332 22222211111 1111 235779999999
Q ss_pred hhc-CCCeEEEEEeec--CCCCCCCcCCCcCCCCHHHHHHHHHHHHHHHHHHhcC
Q 005255 315 TEV-AGLSGLDFAYTD--KSAVYHTKNDRLDLLKPGSLQHLGENMLDFLLQTASS 366 (706)
Q Consensus 315 ~~~-~GiPgld~a~~~--~~~~YHT~~Dt~d~id~~sLq~~g~~~l~ll~~la~~ 366 (706)
... .++|...+.-.. .-+.|||..|+++.|+++.|+..-+.+..++..|-+.
T Consensus 254 cSPG~dLPv~~~~Rs~yg~ypEYHTS~Dnl~fi~p~~L~~s~~~~~~~i~~lE~n 308 (386)
T PF09940_consen 254 CSPGFDLPVGSLMRSKYGEYPEYHTSLDNLDFISPEGLEGSFEVLLEAIEILENN 308 (386)
T ss_dssp TSTTT---EEEEESS-TT--TTTTBTTSSGGG--HHHHHHHHHHHHHHHHHHHH-
T ss_pred ecCCcCCceeeeecccccCCcccccCCCccccCCHHHHHHHHHHHHHHHHHHhcC
Confidence 872 136766665332 3357999999999999999999888888888777654
No 36
>KOG2275 consensus Aminoacylase ACY1 and related metalloexopeptidases [Amino acid transport and metabolism]
Probab=99.24 E-value=8.7e-11 Score=127.09 Aligned_cols=123 Identities=19% Similarity=0.229 Sum_probs=97.4
Q ss_pred HHHHHHHHHHHhhccccCCcceEEEEeeeccCCCcccccccccCccccccccceEEEEEcCCCCCCCCCCeEEEeecccc
Q 005255 111 RALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYSDLNHIVLRILPKYASEAGENAILVSSHIDT 190 (706)
Q Consensus 111 ~a~~yL~~~l~~ig~~~~~~~~vevd~f~~~~g~~~~~g~~~~~~~~~y~~~~NVi~~i~g~~~~~~~~~~Vll~aH~DS 190 (706)
..++|+.++.+.++... ..++.. + ...+++.+|+|. +++.+.||+++|.|+
T Consensus 49 a~~~Fl~~~a~~l~l~~---~~i~~~----------------------p-~~~~~l~T~~GS---~P~L~silL~SH~DV 99 (420)
T KOG2275|consen 49 ACADFLKKYAKSLGLTV---QKIESE----------------------P-GKYVLLYTWLGS---DPELPSILLNSHTDV 99 (420)
T ss_pred HHHHHHHHHHHhcCCce---eEEEec----------------------C-ceeEEEEEeeCC---CCCccceeeeccccc
Confidence 78999999999998421 112211 1 257889999986 567899999999999
Q ss_pred cCC---------------------CCCCCCChhHHHHHHHHHHHHHhcCCCCCCcEEEEEeCCCCCC-CcChHHHHhcCC
Q 005255 191 VSA---------------------GEGAGDCSSCVAVMLELARVMSQWAHEFKNAVIFLFNTGEEEG-LNGAHSFVTQHP 248 (706)
Q Consensus 191 v~~---------------------~pGA~Dd~sgva~~LE~ar~L~~~~~~p~~~I~flf~~~EE~g-l~GS~~f~~~~~ 248 (706)
||+ ++|+.|+++-++++||++|.|..+|.+|+|+|.+.|..|||.| -.|++.|++ +.
T Consensus 100 VP~f~e~W~h~Pfsa~~~~~g~IyaRGaqD~K~~~va~leAir~L~~~g~kp~Rti~lsfvpDEEi~G~~Gm~~fa~-~~ 178 (420)
T KOG2275|consen 100 VPVFREKWTHPPFSAFKDEDGNIYARGAQDMKCVGVAYLEAIRNLKASGFKPKRTIHLSFVPDEEIGGHIGMKEFAK-TE 178 (420)
T ss_pred cCCCcccCccCCccccccCCCcEEeccccchHhHHHHHHHHHHHHHhcCCCcCceEEEEecCchhccCcchHHHHhh-hh
Confidence 985 4899999999999999999999999999999999999999987 689999995 44
Q ss_pred ccCCceEEEEeecCc
Q 005255 249 WSTTIRVAVDLEAMG 263 (706)
Q Consensus 249 ~~~~v~a~iNLD~~G 263 (706)
..++....+.+|=-|
T Consensus 179 ~~~~l~~~filDEG~ 193 (420)
T KOG2275|consen 179 EFKKLNLGFILDEGG 193 (420)
T ss_pred hhcccceeEEecCCC
Confidence 334444555555443
No 37
>PF05450 Nicastrin: Nicastrin; InterPro: IPR008710 Nicastrin and presenilin are two major components of the gamma-secretase complex, which executes the intramembrane proteolysis of type I integral membrane proteins such as the amyloid precursor protein (APP) and Notch. Nicastrin is synthesised in fibroblasts and neurons as an endoglycosidase-H-sensitive glycosylated precursor protein (immature nicastrin) and is then modified by complex glycosylation in the Golgi apparatus and by sialylation in the trans-Golgi network (mature nicastrin) [].; GO: 0016485 protein processing, 0016021 integral to membrane
Probab=99.24 E-value=1.6e-10 Score=119.37 Aligned_cols=167 Identities=20% Similarity=0.299 Sum_probs=115.8
Q ss_pred CeEEEeecccccC----CCCCCCCChhHHHHHHHHHHHHHhc---CCCCCCcEEEEEeCCCCCCCcChHHHHhcCC---c
Q 005255 180 NAILVSSHIDTVS----AGEGAGDCSSCVAVMLELARVMSQW---AHEFKNAVIFLFNTGEEEGLNGAHSFVTQHP---W 249 (706)
Q Consensus 180 ~~Vll~aH~DSv~----~~pGA~Dd~sgva~~LE~ar~L~~~---~~~p~~~I~flf~~~EE~gl~GS~~f~~~~~---~ 249 (706)
|.|++.|.+||.. .+|||+++.+|++++|++++.|.+. ....+++|.|+|+.||..|..||+.|+.+.. +
T Consensus 1 ~iIlv~armDs~s~F~~~s~GA~s~~sglvaLLaaA~aL~~~~~~~~~~~knV~F~~F~GEs~dYiGS~R~vyDm~~~~f 80 (234)
T PF05450_consen 1 PIILVVARMDSFSFFHDLSPGADSSVSGLVALLAAAEALSKLLPDSSNLNKNVLFAFFNGESFDYIGSSRFVYDMQNGNF 80 (234)
T ss_pred CEEEEEecccchhcccCCCCCcccchHHHHHHHHHHHHHHHhhhccccccCcEEEEEecCccccccchHHHHHHHHcCcC
Confidence 5799999999974 4799999999999999999999874 2357899999999999999999999986421 1
Q ss_pred -----------cCCceEEEEeecCcCCCCcccccc--CC--C---HHHHHHHHHHccCCCC--cccccccccCCCCCCCC
Q 005255 250 -----------STTIRVAVDLEAMGIGGRSALFQA--GP--N---LWAVENFAAVAKYPSG--QIIGQDLFASGVFETAT 309 (706)
Q Consensus 250 -----------~~~v~a~iNLD~~G~gg~~~lfq~--g~--~---~~li~~y~~~a~~p~~--~~l~~e~f~~g~ips~T 309 (706)
.+++..+|.++.+|..+...++.- ++ + ....+...+..+.+.. ....+..-....+|..+
T Consensus 81 ~~~~~~~~~i~~~~I~~~IElgqvg~~~~~~l~~Hvd~~~~~~~~~~~~~~l~~~~~s~~~~~~~~~~~~~~~~~LPPsS 160 (234)
T PF05450_consen 81 PSDSLQFQPISLDNIDSVIELGQVGLSNSSGLYAHVDSPSNSSVANQVDEALDAAAKSLASSNIVIKKASSSNPPLPPSS 160 (234)
T ss_pred cccccccccccHHHCCEEEEeeccCCCCCCCEEEEecCCccchhhHHHHHHHHHHHHhccccccceeccccCCCCCCcch
Confidence 158999999999998765333321 11 1 2233333332222221 11111111123466666
Q ss_pred chHHHhhcCCCeEEEEEeecC---CCCCCCcCCCcCCCCH
Q 005255 310 DFQVYTEVAGLSGLDFAYTDK---SAVYHTKNDRLDLLKP 346 (706)
Q Consensus 310 D~~~F~~~~GiPgld~a~~~~---~~~YHT~~Dt~d~id~ 346 (706)
=++..++..++||+-++-.+. ..+||+.+|+.++++.
T Consensus 161 ~~sFLr~~~~i~~vVLtd~~~~f~N~~y~S~~D~~~ni~~ 200 (234)
T PF05450_consen 161 LQSFLRKDPNIPGVVLTDHDSQFTNKYYNSILDDAENINF 200 (234)
T ss_pred HHHHHccCCCCCEEEecCCCcccccCCccCcccChhhhcC
Confidence 555555545899998875544 3479999999998876
No 38
>PRK05469 peptidase T; Provisional
Probab=99.23 E-value=1.2e-10 Score=129.69 Aligned_cols=126 Identities=14% Similarity=0.193 Sum_probs=97.3
Q ss_pred HHHHHHHHHHHcCCCCCCC------C-HHHHHHHHHHHHHHHhhccccCCcceEEEEeeeccCCCcccccccccCccccc
Q 005255 87 LEAMKHVKALTQLGPHAVG------S-DALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIY 159 (706)
Q Consensus 87 erA~~~L~~L~~igpR~~g------S-~~~~~a~~yL~~~l~~ig~~~~~~~~vevd~f~~~~g~~~~~g~~~~~~~~~y 159 (706)
+.+.+.|++|.+|..-... | .+++++.+||+++|+++|.+ .++++
T Consensus 2 ~~~~~~l~~~~~i~s~s~~~~~~~~~~~~~~~~a~~l~~~l~~~G~~-----~~~~~----------------------- 53 (408)
T PRK05469 2 DKLLERFLRYVKIDTQSDENSTTVPSTEGQWDLAKLLVEELKELGLQ-----DVTLD----------------------- 53 (408)
T ss_pred chHHHHHHhhEEeecccCCCCCCCCCCHHHHHHHHHHHHHHHHcCCC-----eEEEC-----------------------
Confidence 4577889999887542211 1 44678999999999999841 13332
Q ss_pred cccceEEEEEcCCCCCCCCCCeEEEeecccccCCC---------------------------------------------
Q 005255 160 SDLNHIVLRILPKYASEAGENAILVSSHIDTVSAG--------------------------------------------- 194 (706)
Q Consensus 160 ~~~~NVi~~i~g~~~~~~~~~~Vll~aH~DSv~~~--------------------------------------------- 194 (706)
...||+++++|+. +++.+.|++.+|+|+||..
T Consensus 54 -~~~~v~~~~~g~~--~~~~~~i~l~~H~D~vp~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 130 (408)
T PRK05469 54 -ENGYVMATLPANV--DKDVPTIGFIAHMDTAPDFSGKNVKPQIIENYDGGDIALGDGNEVLSPAEFPELKNYIGQTLIT 130 (408)
T ss_pred -CCeEEEEEecCCC--CCCCCeEEEEEeccCCCCCCCCCCCCEEeccCCCcceecCCCceEechHhCchHHhccCCCEEE
Confidence 2468999997641 2345889999999999642
Q ss_pred -CCC----CCChhHHHHHHHHHHHHHhcCCCCCCcEEEEEeCCCCCCCcChHHHH
Q 005255 195 -EGA----GDCSSCVAVMLELARVMSQWAHEFKNAVIFLFNTGEEEGLNGAHSFV 244 (706)
Q Consensus 195 -pGA----~Dd~sgva~~LE~ar~L~~~~~~p~~~I~flf~~~EE~gl~GS~~f~ 244 (706)
+|+ .||++|+|+++.+++.|.+.+..++.+|+|+|..+||.| .|++.+.
T Consensus 131 ~rG~~~lg~D~Kgglaa~l~a~~~l~~~~~~~~g~v~~~f~~dEE~g-~Ga~~~~ 184 (408)
T PRK05469 131 TDGTTLLGADDKAGIAEIMTALEYLIAHPEIKHGDIRVAFTPDEEIG-RGADKFD 184 (408)
T ss_pred cCCCEeecccchHHHHHHHHHHHHHHhCCCCCCCCEEEEEecccccC-CCHHHhh
Confidence 365 999999999999999998765567789999999999998 8999886
No 39
>PRK13007 succinyl-diaminopimelate desuccinylase; Reviewed
Probab=99.23 E-value=1.5e-10 Score=125.80 Aligned_cols=133 Identities=28% Similarity=0.312 Sum_probs=102.3
Q ss_pred HHHHHHHHHHHcCCCCCCCCHHHHHHHHHHHHHHHhh-ccccCCcceEEEEeeeccCCCcccccccccCccccccccceE
Q 005255 87 LEAMKHVKALTQLGPHAVGSDALDRALQYVLAASQKI-KESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYSDLNHI 165 (706)
Q Consensus 87 erA~~~L~~L~~igpR~~gS~~~~~a~~yL~~~l~~i-g~~~~~~~~vevd~f~~~~g~~~~~g~~~~~~~~~y~~~~NV 165 (706)
+++.+.+++|.++ |-+ |..+.++.+||.++|+++ + .+++. ...|+
T Consensus 7 ~~~~~~l~~li~i-ps~--s~~e~~~~~~l~~~l~~~~~------~~~~~-------------------------~~~~~ 52 (352)
T PRK13007 7 ADLAELTAALVDI-PSV--SGDEKALADAVEAALRALPH------LEVIR-------------------------HGNSV 52 (352)
T ss_pred HHHHHHHHHHhcC-CCC--CchHHHHHHHHHHHHHhCcC------ceEEe-------------------------cCCeE
Confidence 6789999999986 333 445668999999999996 4 22221 12589
Q ss_pred EEEEcCCCCCCCCCCeEEEeecccccCC--------------CCCCCCChhHHHHHHHHHHHHHhcCCCCCCcEEEEEeC
Q 005255 166 VLRILPKYASEAGENAILVSSHIDTVSA--------------GEGAGDCSSCVAVMLELARVMSQWAHEFKNAVIFLFNT 231 (706)
Q Consensus 166 i~~i~g~~~~~~~~~~Vll~aH~DSv~~--------------~pGA~Dd~sgva~~LE~ar~L~~~~~~p~~~I~flf~~ 231 (706)
++++.++ +.+.|++.+|+|+||. ++|+.|+++|+|++|.+++.|. +++++|.|+|.+
T Consensus 53 ~~~~~~~-----~~~~i~l~~H~Dtvp~~~~~~~~~~~g~i~GrG~~D~Kg~~a~~l~a~~~l~----~~~~~i~~~~~~ 123 (352)
T PRK13007 53 VARTDLG-----RPSRVVLAGHLDTVPVADNLPSRREGDRLYGCGASDMKSGLAVMLHLAATLA----EPAHDLTLVFYD 123 (352)
T ss_pred EEEccCC-----CCCeEEEEccccccCCCCCCCcceeCCEEEccCcccccHHHHHHHHHHHHhh----ccCCCeEEEEEe
Confidence 9998432 1246999999999985 4899999999999999999993 367899999999
Q ss_pred CCCCCC--cChHHHHhcCCccCCceEEEEeecC
Q 005255 232 GEEEGL--NGAHSFVTQHPWSTTIRVAVDLEAM 262 (706)
Q Consensus 232 ~EE~gl--~GS~~f~~~~~~~~~v~a~iNLD~~ 262 (706)
+||.|. .|++.+..+++...+..++++.|..
T Consensus 124 ~EE~~~~~~G~~~~~~~~~~~~~~d~~i~~ep~ 156 (352)
T PRK13007 124 CEEVEAEANGLGRLAREHPEWLAGDFAILLEPT 156 (352)
T ss_pred cccccCCcccHHHHHHhcccccCCCEEEEecCC
Confidence 999865 5888888665544456788888753
No 40
>PRK15026 aminoacyl-histidine dipeptidase; Provisional
Probab=99.23 E-value=1.7e-10 Score=131.39 Aligned_cols=139 Identities=16% Similarity=0.261 Sum_probs=106.6
Q ss_pred CCCHHHHHHHHHHHHcCCCCCCCCHHHHHHHHHHHHHHHhhccccCCcceEEEEeeeccCCCcccccccccCcccccccc
Q 005255 83 GFSELEAMKHVKALTQLGPHAVGSDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYSDL 162 (706)
Q Consensus 83 ~fs~erA~~~L~~L~~igpR~~gS~~~~~a~~yL~~~l~~ig~~~~~~~~vevd~f~~~~g~~~~~g~~~~~~~~~y~~~ 162 (706)
....++.++.+++|+++ |++.+ .++++.+||.++++++|. ++++| ..
T Consensus 6 ~~~~~~~~~~l~~Lv~i-ps~S~--~e~~~~~~l~~~~~~~G~------~~~~d------------------------~~ 52 (485)
T PRK15026 6 QLSPQPLWDIFAKICSI-PHPSY--HEEQLAEYIVGWAKEKGF------HVERD------------------------QV 52 (485)
T ss_pred hcCHHHHHHHHHHHhCC-CCCCC--CHHHHHHHHHHHHHhCCC------EEEEE------------------------ec
Confidence 34678899999999998 56544 445899999999999983 45543 23
Q ss_pred ceEEEEEcCCCCCCCCCCeEEEeecccccCC------------------------CCCC---CCChhHHHHHHHHHHHHH
Q 005255 163 NHIVLRILPKYASEAGENAILVSSHIDTVSA------------------------GEGA---GDCSSCVAVMLELARVMS 215 (706)
Q Consensus 163 ~NVi~~i~g~~~~~~~~~~Vll~aH~DSv~~------------------------~pGA---~Dd~sgva~~LE~ar~L~ 215 (706)
.|+++++++..+ .+..+.|++.+|+|+|+. ++|+ .||++|+|++|++++
T Consensus 53 gnvi~~~~~~~g-~~~~~~v~l~gH~DtV~~~~~~~~~~w~~~P~~~~i~~~~l~g~Gt~lgaD~k~gva~~l~~l~--- 128 (485)
T PRK15026 53 GNILIRKPATAG-MENRKPVVLQAHLDMVPQKNNDTVHDFTKDPIQPYIDGEWVKARGTTLGADNGIGMASALAVLA--- 128 (485)
T ss_pred CeEEEEEcCCCC-CCCCCEEEEEeeecccCCCCCCccccCCCCCceEEEcCCEEEeCCccccCccHHHHHHHHHHHH---
Confidence 689998865311 134578999999999974 2777 499999999998763
Q ss_pred hcCCCCCCcEEEEEeCCCCCCCcChHHHHhcCCccCCceEEEEeecC
Q 005255 216 QWAHEFKNAVIFLFNTGEEEGLNGAHSFVTQHPWSTTIRVAVDLEAM 262 (706)
Q Consensus 216 ~~~~~p~~~I~flf~~~EE~gl~GS~~f~~~~~~~~~v~a~iNLD~~ 262 (706)
+.+. ++.+|.++|+.+||.|+.||+.+.. . ..+.+++||+|..
T Consensus 129 ~~~~-~~~~i~~l~t~dEE~G~~ga~~l~~--~-~~~~~~~i~~e~~ 171 (485)
T PRK15026 129 DENV-VHGPLEVLLTMTEEAGMDGAFGLQS--N-WLQADILINTDSE 171 (485)
T ss_pred hCCC-CCCCEEEEEEcccccCcHhHHHhhh--c-cCCcCEEEEeCCC
Confidence 3333 4678999999999999999999863 2 2457899999986
No 41
>TIGR01883 PepT-like peptidase T-like protein. This model represents a clade of enzymes closely related to Peptidase T, an aminotripeptidase found in bacteria. This clade consists of gram positive bacteria of which several additionally contain a Peptidase T gene.
Probab=99.23 E-value=1.2e-10 Score=127.04 Aligned_cols=128 Identities=27% Similarity=0.304 Sum_probs=98.6
Q ss_pred HHHHHHHHHHcCCCCCCCCHHHHHHHHHHHHHHHhhccccCCcceEEEEeeeccCCCcccccccccCccccccccceEEE
Q 005255 88 EAMKHVKALTQLGPHAVGSDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYSDLNHIVL 167 (706)
Q Consensus 88 rA~~~L~~L~~igpR~~gS~~~~~a~~yL~~~l~~ig~~~~~~~~vevd~f~~~~g~~~~~g~~~~~~~~~y~~~~NVi~ 167 (706)
|.++.+++|.++.. .|.++.++.+||.++|+++|. +++.+. ... .+.+..|+++
T Consensus 1 ~~~~~~~~l~~i~s---~s~~e~~~~~~l~~~l~~~g~------~~~~~~--~~~---------------~~~~~~~~~~ 54 (361)
T TIGR01883 1 RLKKYFLELIQIDS---ESGKEKAILTYLKKQITKLGI------PVSLDE--VPA---------------EVSNDNNLIA 54 (361)
T ss_pred ChHHHHHHHeecCC---CCCcHHHHHHHHHHHHHHcCC------EEEEec--ccc---------------ccCCCceEEE
Confidence 46788999988743 244567899999999999983 333321 100 0113579999
Q ss_pred EEcCCCCCCCCCCeEEEeecccccCC--------------CCCC----CCChhHHHHHHHHHHHHHhcCCCCCCcEEEEE
Q 005255 168 RILPKYASEAGENAILVSSHIDTVSA--------------GEGA----GDCSSCVAVMLELARVMSQWAHEFKNAVIFLF 229 (706)
Q Consensus 168 ~i~g~~~~~~~~~~Vll~aH~DSv~~--------------~pGA----~Dd~sgva~~LE~ar~L~~~~~~p~~~I~flf 229 (706)
+++|+ .+.+.|++++|+|+||. ++|+ .|+++|++++|++++.|.+.+ .++++|.|+|
T Consensus 55 ~~~g~----~~~~~i~l~~H~D~V~~~~~~~~~~~~~~~~g~G~~~~g~D~k~g~a~~l~~~~~l~~~~-~~~~~v~~~~ 129 (361)
T TIGR01883 55 RLPGT----VKFDTIFFCGHMDTVPPGAGPEPVVEDGIFTSLGGTILGADDKAGVAAMLEAMDVLSTEE-TPHGTIEFIF 129 (361)
T ss_pred EEeCC----CCCCcEEEEeeccccCCCCCCCceecCCeEecCCCeEeeccccHHHHHHHHHHHHHHhcC-CCCCCEEEEE
Confidence 99764 23468999999999984 3677 899999999999999998765 5678999999
Q ss_pred eCCCCCCCcChHHHHhc
Q 005255 230 NTGEEEGLNGAHSFVTQ 246 (706)
Q Consensus 230 ~~~EE~gl~GS~~f~~~ 246 (706)
+.+||.|..|++.+.++
T Consensus 130 ~~~EE~g~~G~~~~~~~ 146 (361)
T TIGR01883 130 TVKEELGLIGMRLFDES 146 (361)
T ss_pred EcccccCchhHhHhChh
Confidence 99999999999998743
No 42
>PRK06837 acetylornithine deacetylase; Provisional
Probab=99.22 E-value=1.7e-10 Score=129.30 Aligned_cols=146 Identities=18% Similarity=0.139 Sum_probs=103.1
Q ss_pred CHHHHHHHHHHHHcCCCCCCCCHHHHHHHHHHHHHHHhhccccCCcceEEEEeeeccCCCcccccccccCccccccccce
Q 005255 85 SELEAMKHVKALTQLGPHAVGSDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYSDLNH 164 (706)
Q Consensus 85 s~erA~~~L~~L~~igpR~~gS~~~~~a~~yL~~~l~~ig~~~~~~~~vevd~f~~~~g~~~~~g~~~~~~~~~y~~~~N 164 (706)
+.+++.+.+++|.+|.. .|.++.++.+||.++|+++|. +++....... ......+ .......+.+..|
T Consensus 18 ~~~~~~~~l~~li~ipS---~s~~e~~~~~~l~~~l~~~G~------~~~~~~~~~~-~~~~~~~--~~~~~~~~~~~~n 85 (427)
T PRK06837 18 GFDAQVAFTQDLVRFPS---TRGAEAPCQDFLARAFRERGY------EVDRWSIDPD-DLKSHPG--AGPVEIDYSGAPN 85 (427)
T ss_pred hhHHHHHHHHHHhccCC---CCCcHHHHHHHHHHHHHHCCC------ceEEecCCHH-Hhhhccc--ccccccccCCCce
Confidence 34677888999988743 244566899999999999984 3322110000 0000000 0000112235689
Q ss_pred EEEEEcCCCCCCCCCCeEEEeecccccCCC---------------------CCCCCChhHHHHHHHHHHHHHhcCCCCCC
Q 005255 165 IVLRILPKYASEAGENAILVSSHIDTVSAG---------------------EGAGDCSSCVAVMLELARVMSQWAHEFKN 223 (706)
Q Consensus 165 Vi~~i~g~~~~~~~~~~Vll~aH~DSv~~~---------------------pGA~Dd~sgva~~LE~ar~L~~~~~~p~~ 223 (706)
|+++++|+ .++.+.|++.+|+|+||.+ +|+.|+++|++++|.+++.|.+.+..+++
T Consensus 86 l~a~~~g~---~~~~~~il~~gH~DvVp~~~~~~W~~~Pf~~~~~~g~lyGrG~~D~Kgg~~a~l~a~~~l~~~~~~~~~ 162 (427)
T PRK06837 86 VVGTYRPA---GKTGRSLILQGHIDVVPEGPLDLWSRPPFDPVIVDGWMYGRGAADMKAGLAAMLFALDALRAAGLAPAA 162 (427)
T ss_pred EEEEecCC---CCCCCeEEEEeecccCCCCCccccccCCCCcEEECCEEEecCcccchHHHHHHHHHHHHHHHcCCCCCC
Confidence 99999864 2335789999999999862 59999999999999999999988777889
Q ss_pred cEEEEEeCCCCCCCcChHHHHh
Q 005255 224 AVIFLFNTGEEEGLNGAHSFVT 245 (706)
Q Consensus 224 ~I~flf~~~EE~gl~GS~~f~~ 245 (706)
+|.|+|+.+||.+..|+.....
T Consensus 163 ~i~~~~~~dEE~~g~g~~~~~~ 184 (427)
T PRK06837 163 RVHFQSVIEEESTGNGALSTLQ 184 (427)
T ss_pred cEEEEEEeccccCCHhHHHHHh
Confidence 9999999999988888877653
No 43
>COG4882 Predicted aminopeptidase, Iap family [General function prediction only]
Probab=99.22 E-value=1.5e-10 Score=122.25 Aligned_cols=170 Identities=18% Similarity=0.170 Sum_probs=121.4
Q ss_pred cceEEEEEcCCCCCCCCCCeEEEeecccccCCCCCCCCChhHHHHHHHHHHHHHhcCCCCCCcEEEEEeCCCCCCC----
Q 005255 162 LNHIVLRILPKYASEAGENAILVSSHIDTVSAGEGAGDCSSCVAVMLELARVMSQWAHEFKNAVIFLFNTGEEEGL---- 237 (706)
Q Consensus 162 ~~NVi~~i~g~~~~~~~~~~Vll~aH~DSv~~~pGA~Dd~sgva~~LE~ar~L~~~~~~p~~~I~flf~~~EE~gl---- 237 (706)
..|+|+.=. ..++.++++||.|+|. .|+.||-.|++...|+++.|...+ ..+-++.|++||.|+
T Consensus 178 ~y~~Ia~~~------~en~vv~i~AH~DHW~--~G~tDN~lg~~~AV~~~~~lr~~~----~~~~lv~FtAEE~g~p~~~ 245 (486)
T COG4882 178 DYNVIAVDG------GENGVVLIGAHLDHWY--TGFTDNILGVAQAVETAGRLRGRG----LAAGLVVFTAEEHGMPGMA 245 (486)
T ss_pred EEEEEEecC------CCCCceEEeechhhhh--hcccchhhhHHHHHHHHHHHhhcC----cceeEEEEeccccCCCCCc
Confidence 567766322 2456899999999996 799999999999999999998764 456778899999876
Q ss_pred -----cChHHHHhcCCccCCceEEEEeecCcCCCCccccccCCCHHHHHHHHHHccCCCCcccccccccCCCCCCCCchH
Q 005255 238 -----NGAHSFVTQHPWSTTIRVAVDLEAMGIGGRSALFQAGPNLWAVENFAAVAKYPSGQIIGQDLFASGVFETATDFQ 312 (706)
Q Consensus 238 -----~GS~~f~~~~~~~~~v~a~iNLD~~G~gg~~~lfq~g~~~~li~~y~~~a~~p~~~~l~~e~f~~g~ips~TD~~ 312 (706)
.||+.|.++.+..+.+.+.+|+|.+|.+-. .+ ...|.+++.-.+..+.... .++.+ .|-.
T Consensus 246 sfyWa~GSr~~lk~~k~~~~v~~~VN~Dv~g~~~l-v~---~~~P~L~e~~~~~g~~~ve---spe~y--------~Ds~ 310 (486)
T COG4882 246 SFYWAAGSRGLLKESKAAEEVEAYVNFDVAGYRCL-VA---SGAPQLVEHALEAGAVEVE---SPEPY--------CDSI 310 (486)
T ss_pred ceeecccchHHHhhcCCchhhhheeccccccccch-hh---hcChHHHHHHHHhCCceec---CCCcc--------cchh
Confidence 389999987777889999999999987542 11 2357777776664322111 23332 4556
Q ss_pred HHhhcCCCeEEEEEeecCC---CCCCCcCCCcCCCCHHHHHHHHHHHHHHHHHHhc
Q 005255 313 VYTEVAGLSGLDFAYTDKS---AVYHTKNDRLDLLKPGSLQHLGENMLDFLLQTAS 365 (706)
Q Consensus 313 ~F~~~~GiPgld~a~~~~~---~~YHT~~Dt~d~id~~sLq~~g~~~l~ll~~la~ 365 (706)
.+.. +|||.+.+....+. ..|||+.||+.. .+... .++..+..+.+
T Consensus 311 ~y~~-aGiPS~Ti~SL~~~~~~e~yh~p~Dtpa~--~~n~~----t~~d~a~r~v~ 359 (486)
T COG4882 311 MYAW-AGIPSLTIHSLWCPGVQEAYHTPRDTPAS--WDNAW----TAVDAAVRTVT 359 (486)
T ss_pred hhhh-cCCCeeEeeeccCCCccceecCCCCCchh--HHHHH----HHHHHHHHHHh
Confidence 6776 99999999887643 479999999942 23333 34444555553
No 44
>PRK06915 acetylornithine deacetylase; Validated
Probab=99.21 E-value=2.5e-10 Score=127.52 Aligned_cols=157 Identities=23% Similarity=0.242 Sum_probs=107.9
Q ss_pred HHHHHHHHHHHHcCCCCCCCCHHHHHHHHHHHHHHHhhccccCCcceEEEEeeeccCCCcccccccccCccccccccceE
Q 005255 86 ELEAMKHVKALTQLGPHAVGSDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYSDLNHI 165 (706)
Q Consensus 86 ~erA~~~L~~L~~igpR~~gS~~~~~a~~yL~~~l~~ig~~~~~~~~vevd~f~~~~g~~~~~g~~~~~~~~~y~~~~NV 165 (706)
.+++.+.+++|.++. - -|.++.++.+||.++|+++|. ++++. ...... ......+......+....|+
T Consensus 16 ~~~~~~~l~~lv~ip-s--~s~~e~~~~~~l~~~l~~~G~------~~~~~--~~~~~~-~~~~~~~~~~~~~~~~~~nl 83 (422)
T PRK06915 16 EEEAVKLLKRLIQEK-S--VSGDESGAQAIVIEKLRELGL------DLDIW--EPSFKK-LKDHPYFVSPRTSFSDSPNI 83 (422)
T ss_pred HHHHHHHHHHHHhCC-C--CCcchHHHHHHHHHHHHhcCC------eeEEe--ecchhh-hhcccccCCcccccCCCceE
Confidence 467889999999863 2 245567889999999999984 33322 111000 00000000000011245899
Q ss_pred EEEEcCCCCCCCCCCeEEEeecccccCC---------------------CCCCCCChhHHHHHHHHHHHHHhcCCCCCCc
Q 005255 166 VLRILPKYASEAGENAILVSSHIDTVSA---------------------GEGAGDCSSCVAVMLELARVMSQWAHEFKNA 224 (706)
Q Consensus 166 i~~i~g~~~~~~~~~~Vll~aH~DSv~~---------------------~pGA~Dd~sgva~~LE~ar~L~~~~~~p~~~ 224 (706)
+++++|. .+.+.|++.+|+|+||. ++|+.|+++|++++|.+++.|.+.+.+++.+
T Consensus 84 ia~~~g~----~~~~~l~l~~H~Dtvp~~~~~~W~~~Pf~~~~~~g~lyGrG~~D~Kgg~aa~l~a~~~l~~~~~~~~~~ 159 (422)
T PRK06915 84 VATLKGS----GGGKSMILNGHIDVVPEGDVNQWDHHPYSGEVIGGRIYGRGTTDMKGGNVALLLAMEALIESGIELKGD 159 (422)
T ss_pred EEEEcCC----CCCCeEEEEeeccccCCCCcccCcCCCCCceEECCEEEecCcccchHHHHHHHHHHHHHHHcCCCCCCc
Confidence 9999764 23478999999999984 3899999999999999999999887777889
Q ss_pred EEEEEeCCCCCCCcChHHHHhcCCccCCceEEEEeec
Q 005255 225 VIFLFNTGEEEGLNGAHSFVTQHPWSTTIRVAVDLEA 261 (706)
Q Consensus 225 I~flf~~~EE~gl~GS~~f~~~~~~~~~v~a~iNLD~ 261 (706)
|.|++..+||.|..|+.....+. + +...++.-|.
T Consensus 160 v~~~~~~dEE~g~~G~~~~~~~~-~--~~d~~i~~ep 193 (422)
T PRK06915 160 VIFQSVIEEESGGAGTLAAILRG-Y--KADGAIIPEP 193 (422)
T ss_pred EEEEEecccccCCcchHHHHhcC-c--CCCEEEECCC
Confidence 99999999999988988877432 2 2344554443
No 45
>PRK13381 peptidase T; Provisional
Probab=99.21 E-value=1.9e-10 Score=127.92 Aligned_cols=125 Identities=17% Similarity=0.282 Sum_probs=96.2
Q ss_pred HHHHHHHHHcCCCCCC-------CCHHHHHHHHHHHHHHHhhccccCCcceEEEEeeeccCCCcccccccccCccccccc
Q 005255 89 AMKHVKALTQLGPHAV-------GSDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYSD 161 (706)
Q Consensus 89 A~~~L~~L~~igpR~~-------gS~~~~~a~~yL~~~l~~ig~~~~~~~~vevd~f~~~~g~~~~~g~~~~~~~~~y~~ 161 (706)
+.+.+.++.+|..... .+++++++++||.++|+++|.+ .+++| .
T Consensus 3 ~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~l~~~l~~~G~~-----~~~~~------------------------~ 53 (404)
T PRK13381 3 LTDRFFRYLKVNSQSDAASGTLPSTPGQHELAKLLADELRELGLE-----DIVID------------------------E 53 (404)
T ss_pred HHHHhHhhEEEeccCCCCCCCCcCChhHHHHHHHHHHHHHHcCCC-----cEEEc------------------------C
Confidence 5677888877643221 2455678999999999999841 12221 2
Q ss_pred cceEEEEEcCCCCCCCCCCeEEEeecccccCCC----------------------------------------------C
Q 005255 162 LNHIVLRILPKYASEAGENAILVSSHIDTVSAG----------------------------------------------E 195 (706)
Q Consensus 162 ~~NVi~~i~g~~~~~~~~~~Vll~aH~DSv~~~----------------------------------------------p 195 (706)
..||+++++|+ .+..+.|++++|+|+||.. +
T Consensus 54 ~~nvi~~~~g~---~~~~~~lll~~H~D~Vp~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gr 130 (404)
T PRK13381 54 HAIVTAKLPGN---TPGAPRIGFIAHLDTVDVGLSPDIHPQILRFDGGDLCLNAEQGIWLRTAEHPELLNYQGEDIIFSD 130 (404)
T ss_pred CeEEEEEEecC---CCCCCeEEEEEEecCCCccCCCCcCcEEEecCCCceecCCccceeechHhChhHHhccCCcEEeCC
Confidence 36999999764 1223789999999999743 4
Q ss_pred CC----CCChhHHHHHHHHHHHHHhcCCCCCCcEEEEEeCCCCCCCcChHHHHhc
Q 005255 196 GA----GDCSSCVAVMLELARVMSQWAHEFKNAVIFLFNTGEEEGLNGAHSFVTQ 246 (706)
Q Consensus 196 GA----~Dd~sgva~~LE~ar~L~~~~~~p~~~I~flf~~~EE~gl~GS~~f~~~ 246 (706)
|+ .|+++|+|++|.+++.|.+.+ .++.+|.|+|..+||.|..|++.+..+
T Consensus 131 G~~~~g~DmKgg~aa~l~a~~~l~~~~-~~~g~i~~~~~~dEE~g~~G~~~~~~~ 184 (404)
T PRK13381 131 GTSVLGADNKAAIAVVMTLLENLTENE-VEHGDIVVAFVPDEEIGLRGAKALDLA 184 (404)
T ss_pred CccccccccHHHHHHHHHHHHHHHhcC-CCCCCEEEEEEcccccccccHHHHHHh
Confidence 67 999999999999999998764 457799999999999999999999743
No 46
>PRK07522 acetylornithine deacetylase; Provisional
Probab=99.21 E-value=2.1e-10 Score=126.28 Aligned_cols=142 Identities=17% Similarity=0.217 Sum_probs=103.9
Q ss_pred HHHHHHHHHHHcCCCCCCCCHHHHHHHHHHHHHHHhhccccCCcceEEEEeeeccCCCcccccccccCccccccccceEE
Q 005255 87 LEAMKHVKALTQLGPHAVGSDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYSDLNHIV 166 (706)
Q Consensus 87 erA~~~L~~L~~igpR~~gS~~~~~a~~yL~~~l~~ig~~~~~~~~vevd~f~~~~g~~~~~g~~~~~~~~~y~~~~NVi 166 (706)
.++.+.+++|++|.. +.+. ++.++.+||.++|+++|. +++.. .... ....|++
T Consensus 4 ~~~~~~l~~lv~i~S-~s~~-~~~~~~~~l~~~l~~~G~------~~~~~--~~~~-----------------~~~~nv~ 56 (385)
T PRK07522 4 MSSLDILERLVAFDT-VSRD-SNLALIEWVRDYLAAHGV------ESELI--PDPE-----------------GDKANLF 56 (385)
T ss_pred hhHHHHHHHHhCCCC-cCCC-ccHHHHHHHHHHHHHcCC------eEEEE--ecCC-----------------CCcccEE
Confidence 467889999999743 2222 224889999999999983 33332 1110 1347999
Q ss_pred EEEcCCCCCCCCCCeEEEeecccccCC--------------------CCCCCCChhHHHHHHHHHHHHHhcCCCCCCcEE
Q 005255 167 LRILPKYASEAGENAILVSSHIDTVSA--------------------GEGAGDCSSCVAVMLELARVMSQWAHEFKNAVI 226 (706)
Q Consensus 167 ~~i~g~~~~~~~~~~Vll~aH~DSv~~--------------------~pGA~Dd~sgva~~LE~ar~L~~~~~~p~~~I~ 226 (706)
+++.++ +.+.|++.+|+|+||. ++|+.|+++++|++|++++.|.+. +++++|.
T Consensus 57 a~~~~~-----~~~~ill~~H~Dtv~~~~~~W~~~pf~~~~~~g~i~GrG~~D~Kg~~a~~l~a~~~l~~~--~~~~~i~ 129 (385)
T PRK07522 57 ATIGPA-----DRGGIVLSGHTDVVPVDGQAWTSDPFRLTERDGRLYGRGTCDMKGFIAAALAAVPELAAA--PLRRPLH 129 (385)
T ss_pred EEeCCC-----CCCeEEEEeecccccCCCCCCCCCCCceEEECCEEEeccccccchHHHHHHHHHHHHHhC--CCCCCEE
Confidence 998542 2467999999999973 389999999999999999999875 4678999
Q ss_pred EEEeCCCCCCCcChHHHHhcCCcc-CCceEEEEeecC
Q 005255 227 FLFNTGEEEGLNGAHSFVTQHPWS-TTIRVAVDLEAM 262 (706)
Q Consensus 227 flf~~~EE~gl~GS~~f~~~~~~~-~~v~a~iNLD~~ 262 (706)
|+|..+||.|..|++.++++.... .+...++..|..
T Consensus 130 ~~~~~dEE~g~~G~~~l~~~~~~~~~~~d~~i~~ep~ 166 (385)
T PRK07522 130 LAFSYDEEVGCLGVPSMIARLPERGVKPAGCIVGEPT 166 (385)
T ss_pred EEEEeccccCCccHHHHHHHhhhcCCCCCEEEEccCC
Confidence 999999999989999998653221 224555555543
No 47
>PRK07318 dipeptidase PepV; Reviewed
Probab=99.20 E-value=1.6e-10 Score=130.99 Aligned_cols=127 Identities=15% Similarity=0.215 Sum_probs=98.8
Q ss_pred HHHHHHHHHHHHcCCCCCCC---------CHHHHHHHHHHHHHHHhhccccCCcceEEEEeeeccCCCcccccccccCcc
Q 005255 86 ELEAMKHVKALTQLGPHAVG---------SDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKT 156 (706)
Q Consensus 86 ~erA~~~L~~L~~igpR~~g---------S~~~~~a~~yL~~~l~~ig~~~~~~~~vevd~f~~~~g~~~~~g~~~~~~~ 156 (706)
.+++.+.|++|.+|..-..+ -+++.++.+|+.+++++.|. +++.
T Consensus 13 ~~~~~~~l~~lv~i~S~~~~~~~~~~~p~~~~~~~~~~~l~~~~~~~G~------~~~~--------------------- 65 (466)
T PRK07318 13 KDDLIEDLQELLRINSVRDDSKAKEGAPFGPGPVKALEKFLEIAERDGF------KTKN--------------------- 65 (466)
T ss_pred HHHHHHHHHHHhccCcccCCcccccCCCCCccHHHHHHHHHHHHHHCCC------EEEE---------------------
Confidence 46788899999988553222 12356899999999999883 3321
Q ss_pred ccccccceEEEEEcCCCCCCCCCCeEEEeecccccCC-------------------CCCCCCChhHHHHHHHHHHHHHhc
Q 005255 157 LIYSDLNHIVLRILPKYASEAGENAILVSSHIDTVSA-------------------GEGAGDCSSCVAVMLELARVMSQW 217 (706)
Q Consensus 157 ~~y~~~~NVi~~i~g~~~~~~~~~~Vll~aH~DSv~~-------------------~pGA~Dd~sgva~~LE~ar~L~~~ 217 (706)
..|++++++.. +..+.|++++|+|+||. ++|+.||++|+++++.+++.|.+.
T Consensus 66 -----~~n~~~~~~~~----~~~~~l~l~gH~DvVp~~~~W~~~Pf~~~~~dg~lyGRG~~DmKgg~aa~l~Al~~l~~~ 136 (466)
T PRK07318 66 -----VDNYAGHIEYG----EGEEVLGILGHLDVVPAGDGWDTDPYEPVIKDGKIYARGTSDDKGPTMAAYYALKIIKEL 136 (466)
T ss_pred -----ecCccceEEEC----CCCCEEEEEEecCCCCCCCCCCCCCcceEEECCEEEEcccccCcHHHHHHHHHHHHHHHc
Confidence 12455555421 13367999999999984 389999999999999999999988
Q ss_pred CCCCCCcEEEEEeCCCCCCCcChHHHHhcCC
Q 005255 218 AHEFKNAVIFLFNTGEEEGLNGAHSFVTQHP 248 (706)
Q Consensus 218 ~~~p~~~I~flf~~~EE~gl~GS~~f~~~~~ 248 (706)
+.+++++|.|+|+.+||.|..|++.++++++
T Consensus 137 g~~~~~~i~l~~~~DEE~g~~G~~~l~~~~~ 167 (466)
T PRK07318 137 GLPLSKKVRFIVGTDEESGWKCMDYYFEHEE 167 (466)
T ss_pred CCCCCccEEEEEEcccccCchhHHHHHHhCC
Confidence 7777889999999999999999999997654
No 48
>COG1363 FrvX Cellulase M and related proteins [Carbohydrate transport and metabolism]
Probab=99.20 E-value=1.6e-09 Score=117.46 Aligned_cols=225 Identities=19% Similarity=0.245 Sum_probs=154.9
Q ss_pred HHHHHHHHHHHcCCCCCCCCHHHHHHHHHHHHHHHhhccccCCcceEEEEeeeccCCCcccccccccCccccccccceEE
Q 005255 87 LEAMKHVKALTQLGPHAVGSDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYSDLNHIV 166 (706)
Q Consensus 87 erA~~~L~~L~~igpR~~gS~~~~~a~~yL~~~l~~ig~~~~~~~~vevd~f~~~~g~~~~~g~~~~~~~~~y~~~~NVi 166 (706)
++..+.|++|+++ +-+.|. ++++++|++++|++.+. +++.| +..|++
T Consensus 2 ~~~~~~LkeL~~~-~gpsG~--E~eVr~~~~~el~~~~~------ev~~D------------------------~lGnli 48 (355)
T COG1363 2 EELLELLKELLEA-PGPSGY--EEEVRDVLKEELEPLGD------EVEVD------------------------RLGNLI 48 (355)
T ss_pred hHHHHHHHHHHcC-CCCCCc--HHHHHHHHHHHHHHhCC------ceEEc------------------------CCCcEE
Confidence 3567889999985 444444 35689999999999983 45544 568999
Q ss_pred EEEcCCCCCCCCCCeEEEeecccccCCC----------------------------------------------------
Q 005255 167 LRILPKYASEAGENAILVSSHIDTVSAG---------------------------------------------------- 194 (706)
Q Consensus 167 ~~i~g~~~~~~~~~~Vll~aH~DSv~~~---------------------------------------------------- 194 (706)
++++|+ ...+.+++.||+|.+..-
T Consensus 49 a~~~g~----~g~~~imi~AHmDEiG~mV~~I~~~G~Lr~~~IGG~~~~~~~gq~v~i~t~~g~~i~GvIg~~p~H~~~~ 124 (355)
T COG1363 49 AKKGGK----NGPPKVMIAAHMDEIGFMVKEIEDDGFLRFVPIGGWDPQVLEGQRVTIHTDKGKKIRGVIGSKPPHLLKE 124 (355)
T ss_pred EEecCC----CCCccEEEEeecceeeeeEEEECCCceEEEEEcCCcChhhccCcEEEEEeCCCcEEeeeEcccCccccCc
Confidence 999874 234559999999976520
Q ss_pred -------------------------------CC--------------------CCCChhHHHHHHHHHHHHHhcCCCCCC
Q 005255 195 -------------------------------EG--------------------AGDCSSCVAVMLELARVMSQWAHEFKN 223 (706)
Q Consensus 195 -------------------------------pG--------------------A~Dd~sgva~~LE~ar~L~~~~~~p~~ 223 (706)
+| |-||..||++++|++|.| + +..++.
T Consensus 125 ~~~~~~~~~~~el~iDiga~skeea~~lGI~vGd~v~~~~~~~~l~~~~i~skalDdR~gva~lle~lk~l-~-~~~~~~ 202 (355)
T COG1363 125 EAERKKPPEWDELFIDIGASSKEEAEELGIRVGDFVVFDPRFRELANGRVVSKALDDRAGVAALLELLKEL-K-GIELPA 202 (355)
T ss_pred cccccCCCchhhEEEECCcCCHHHHHhcCCCCCCEEEEcCceEEecCCcEEeeeccchHhHHHHHHHHHHh-c-cCCCCc
Confidence 11 679999999999999999 4 567899
Q ss_pred cEEEEEeCCCCCCCcChHHHHhcCCccCCceEEEEeecCcCCCCc--------------cccc--cCC-CHHHHHHHHHH
Q 005255 224 AVIFLFNTGEEEGLNGAHSFVTQHPWSTTIRVAVDLEAMGIGGRS--------------ALFQ--AGP-NLWAVENFAAV 286 (706)
Q Consensus 224 ~I~flf~~~EE~gl~GS~~f~~~~~~~~~v~a~iNLD~~G~gg~~--------------~lfq--~g~-~~~li~~y~~~ 286 (706)
+++|+|+.-||.|+.||+....+ -+...+|.+|..+.+... +.+. +++ ++.+.+...+.
T Consensus 203 ~vy~v~tvqEEVGlrGA~~~a~~----i~pd~aiavd~~~~~d~~~~~~~~~~lg~Gp~i~~~D~~~~~~~~l~~~L~~~ 278 (355)
T COG1363 203 DVYFVASVQEEVGLRGAKTSAFR----IKPDIAIAVDVTPAGDTPGVPKGDVKLGKGPVIRVKDASGIYHPKLRKFLLEL 278 (355)
T ss_pred eEEEEEecchhhccchhhccccc----cCCCEEEEEecccccCCCCCcccccccCCCCEEEEEcCCCCCCHHHHHHHHHH
Confidence 99999999999999999987732 234567778777664331 1111 223 56666665554
Q ss_pred ccCCCCcccccccccCCCCC-CCCchHHHhhc-CCCeEEEEEeecCCCCCCCcCCCcCCCCHHHHHHHHHHHHHHHHHHh
Q 005255 287 AKYPSGQIIGQDLFASGVFE-TATDFQVYTEV-AGLSGLDFAYTDKSAVYHTKNDRLDLLKPGSLQHLGENMLDFLLQTA 364 (706)
Q Consensus 287 a~~p~~~~l~~e~f~~g~ip-s~TD~~~F~~~-~GiPgld~a~~~~~~~YHT~~Dt~d~id~~sLq~~g~~~l~ll~~la 364 (706)
|+. .+...-.++ .| .+||-..+... .|+|...+... -.+-|++ .+.++.+.+.++.+.+.+++.++.
T Consensus 279 A~~-~~Ip~Q~~v-----~~~ggTDA~a~~~~g~gvpta~Igip--~ry~Hs~---~e~~~~~D~~~~~~Ll~~~i~~~~ 347 (355)
T COG1363 279 AEK-NNIPYQVDV-----SPGGGTDAGAAHLTGGGVPTALIGIP--TRYIHSP---VEVAHLDDLEATVKLLVAYLESLD 347 (355)
T ss_pred HHH-cCCCeEEEe-----cCCCCccHHHHHHcCCCCceEEEecc--cccccCc---ceeecHHHHHHHHHHHHHHHHhcc
Confidence 422 111111222 23 57898887652 57999877542 2235774 467788899998888877777654
Q ss_pred c
Q 005255 365 S 365 (706)
Q Consensus 365 ~ 365 (706)
.
T Consensus 348 ~ 348 (355)
T COG1363 348 R 348 (355)
T ss_pred h
Confidence 3
No 49
>PRK08652 acetylornithine deacetylase; Provisional
Probab=99.19 E-value=2e-10 Score=124.43 Aligned_cols=131 Identities=24% Similarity=0.286 Sum_probs=99.9
Q ss_pred HHHHHHHHHHHcCCCCCCCCHHHHHHHHHHHHHHHhhccccCCcceEEEEeeeccCCCcccccccccCccccccccceEE
Q 005255 87 LEAMKHVKALTQLGPHAVGSDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYSDLNHIV 166 (706)
Q Consensus 87 erA~~~L~~L~~igpR~~gS~~~~~a~~yL~~~l~~ig~~~~~~~~vevd~f~~~~g~~~~~g~~~~~~~~~y~~~~NVi 166 (706)
|++.+.+++|.++.. + |.++.++.+||.++|+++|. +++.+. . .+..|++
T Consensus 2 ~~~~~~~~~lv~ips-~--s~~e~~~~~~l~~~l~~~G~------~v~~~~--~-------------------~~~~~~~ 51 (347)
T PRK08652 2 ERAKELLKQLVKIPS-P--SGQEDEIALHIMEFLESLGY------DVHIES--D-------------------GEVINIV 51 (347)
T ss_pred hhHHHHHHHHhcCCC-C--CCchHHHHHHHHHHHHHcCC------EEEEEe--c-------------------CceeEEE
Confidence 688999999998743 2 34557899999999999983 444321 0 0235666
Q ss_pred EEEcCCCCCCCCCCeEEEeecccccCC------------CCCCCCChhHHHHHHHHHHHHHhcCCCCCCcEEEEEeCCCC
Q 005255 167 LRILPKYASEAGENAILVSSHIDTVSA------------GEGAGDCSSCVAVMLELARVMSQWAHEFKNAVIFLFNTGEE 234 (706)
Q Consensus 167 ~~i~g~~~~~~~~~~Vll~aH~DSv~~------------~pGA~Dd~sgva~~LE~ar~L~~~~~~p~~~I~flf~~~EE 234 (706)
+ + +.+.|++.+|+|+||. ++|+.|+++|+|++|++++.|.+. .++++|.|+|..+||
T Consensus 52 ~---~------~~~~i~l~~H~D~vp~~~~~~~~~g~iyGrG~~D~Kg~~a~~l~a~~~l~~~--~~~~~v~~~~~~dEE 120 (347)
T PRK08652 52 V---N------SKAELFVEVHYDTVPVRAEFFVDGVYVYGTGACDAKGGVAAILLALEELGKE--FEDLNVGIAFVSDEE 120 (347)
T ss_pred c---C------CCCEEEEEccccccCCCCCCEEECCEEEeccchhhhHHHHHHHHHHHHHhhc--ccCCCEEEEEecCcc
Confidence 5 2 1267999999999985 489999999999999999999864 346799999999999
Q ss_pred CCCcChHHHHhcCCccCCceEEEEeecC
Q 005255 235 EGLNGAHSFVTQHPWSTTIRVAVDLEAM 262 (706)
Q Consensus 235 ~gl~GS~~f~~~~~~~~~v~a~iNLD~~ 262 (706)
.|..|++.+++++. ...++..|..
T Consensus 121 ~g~~G~~~~~~~~~----~d~~i~~ep~ 144 (347)
T PRK08652 121 EGGRGSALFAERYR----PKMAIVLEPT 144 (347)
T ss_pred cCChhHHHHHHhcC----CCEEEEecCC
Confidence 99899999986542 1456666653
No 50
>PRK00466 acetyl-lysine deacetylase; Validated
Probab=99.19 E-value=2.5e-10 Score=124.37 Aligned_cols=128 Identities=21% Similarity=0.210 Sum_probs=98.0
Q ss_pred HHHHHHHHHHHcCCCCCCCCHHHHHHHHHHHHHHHhhccccCCcceEEEEeeeccCCCcccccccccCccccccccceEE
Q 005255 87 LEAMKHVKALTQLGPHAVGSDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYSDLNHIV 166 (706)
Q Consensus 87 erA~~~L~~L~~igpR~~gS~~~~~a~~yL~~~l~~ig~~~~~~~~vevd~f~~~~g~~~~~g~~~~~~~~~y~~~~NVi 166 (706)
+++.+.|++|.+|.. .|.+++++.+||.++|+++|. +++.+ ...|.+
T Consensus 10 ~~~~~~l~~lv~i~s---~s~~e~~~~~~l~~~l~~~g~------~~~~~------------------------~~~~~~ 56 (346)
T PRK00466 10 QKAKELLLDLLSIYT---PSGNETNATKFFEKISNELNL------KLEIL------------------------PDSNSF 56 (346)
T ss_pred HHHHHHHHHHhcCCC---CCCCHHHHHHHHHHHHHHcCC------eEEEe------------------------cCCCcE
Confidence 688999999999854 344567899999999999983 34432 112443
Q ss_pred EEEcCCCCCCCCCCeEEEeecccccCC------------CCCCCCChhHHHHHHHHHHHHHhcCCCCCCcEEEEEeCCCC
Q 005255 167 LRILPKYASEAGENAILVSSHIDTVSA------------GEGAGDCSSCVAVMLELARVMSQWAHEFKNAVIFLFNTGEE 234 (706)
Q Consensus 167 ~~i~g~~~~~~~~~~Vll~aH~DSv~~------------~pGA~Dd~sgva~~LE~ar~L~~~~~~p~~~I~flf~~~EE 234 (706)
. .|+ +.|++++|+||||. ++|+.||++|+|+++++++.|.+.+ .++.|+|+.+||
T Consensus 57 ~--~g~-------~~lll~gH~DtVp~~~~~~~~~g~iyGrG~~DmKgg~aa~l~a~~~l~~~~----~~i~~~~~~dEE 123 (346)
T PRK00466 57 I--LGE-------GDILLASHVDTVPGYIEPKIEGEVIYGRGAVDAKGPLISMIIAAWLLNEKG----IKVMVSGLADEE 123 (346)
T ss_pred e--cCC-------CeEEEEeccccCCCCCCceeeCCEEEecCccccchHHHHHHHHHHHHHHcC----CCEEEEEEcCcc
Confidence 2 221 35999999999985 3999999999999999999997764 358999999999
Q ss_pred CCCcChHHHHhcCCccCCceEEEEeecCc
Q 005255 235 EGLNGAHSFVTQHPWSTTIRVAVDLEAMG 263 (706)
Q Consensus 235 ~gl~GS~~f~~~~~~~~~v~a~iNLD~~G 263 (706)
.|..|++.+++++. +...++..|..+
T Consensus 124 ~g~~G~~~l~~~~~---~~d~~i~~ep~~ 149 (346)
T PRK00466 124 STSIGAKELVSKGF---NFKHIIVGEPSN 149 (346)
T ss_pred cCCccHHHHHhcCC---CCCEEEEcCCCC
Confidence 99999999996542 345666666554
No 51
>PRK07205 hypothetical protein; Provisional
Probab=99.19 E-value=2.8e-10 Score=128.18 Aligned_cols=128 Identities=19% Similarity=0.227 Sum_probs=98.3
Q ss_pred CHHHHHHHHHHHHcCCCCCC-CC------HHHHHHHHHHHHHHHhhccccCCcceEEEEeeeccCCCcccccccccCccc
Q 005255 85 SELEAMKHVKALTQLGPHAV-GS------DALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTL 157 (706)
Q Consensus 85 s~erA~~~L~~L~~igpR~~-gS------~~~~~a~~yL~~~l~~ig~~~~~~~~vevd~f~~~~g~~~~~g~~~~~~~~ 157 (706)
+.+++.+.|++|.++..-.. +. ++-.++.+|+.++++++|. +++++ .
T Consensus 9 ~~~~~~~~l~~lv~i~S~s~~~~~~~~~~~~~~~~~~~~~~~l~~~g~------~~~~~----~---------------- 62 (444)
T PRK07205 9 VQDACVAAIKTLVSYPSVLNEGENGTPFGQAIQDVLEATLDLCQGLGF------KTYLD----P---------------- 62 (444)
T ss_pred hHHHHHHHHHHHcccccccCCCcCCCCCchhHHHHHHHHHHHHHhCCC------EEEEc----C----------------
Confidence 56788999999998754211 11 2235788999999999883 34332 0
Q ss_pred cccccceEEEEEcCCCCCCCCCCeEEEeecccccCC---------------------CCCCCCChhHHHHHHHHHHHHHh
Q 005255 158 IYSDLNHIVLRILPKYASEAGENAILVSSHIDTVSA---------------------GEGAGDCSSCVAVMLELARVMSQ 216 (706)
Q Consensus 158 ~y~~~~NVi~~i~g~~~~~~~~~~Vll~aH~DSv~~---------------------~pGA~Dd~sgva~~LE~ar~L~~ 216 (706)
...|+++++ |. .++.|++++|+|+||. ++|+.|||.|++++|++++.|.+
T Consensus 63 ---~~~~~~~~~-g~-----~~~~lll~gH~DvVp~~~~~~W~~~Pf~~~v~dg~lyGRGa~DmKgglaa~l~Al~~l~~ 133 (444)
T PRK07205 63 ---KGYYGYAEI-GQ-----GEELLAILCHLDVVPEGDLSDWQTPPFEAVEKDGCLFGRGTQDDKGPSMAALYAVKALLD 133 (444)
T ss_pred ---CCeEEEEEe-cC-----CCcEEEEEEeeccCCCCCcccCCCCCCceEEECCEEEECCcccCcHHHHHHHHHHHHHHH
Confidence 112455554 32 3367999999999985 38999999999999999999999
Q ss_pred cCCCCCCcEEEEEeCCCCCCCcChHHHHhcC
Q 005255 217 WAHEFKNAVIFLFNTGEEEGLNGAHSFVTQH 247 (706)
Q Consensus 217 ~~~~p~~~I~flf~~~EE~gl~GS~~f~~~~ 247 (706)
.+.+++++|.|+|.++||.|..|++.|.++.
T Consensus 134 ~~~~~~~~i~l~~~~dEE~g~~g~~~~~~~~ 164 (444)
T PRK07205 134 AGVQFNKRIRFIFGTDEETLWRCMNRYNEVE 164 (444)
T ss_pred cCCCCCCcEEEEEECCcccCcccHHHHHhCC
Confidence 8878889999999999999999999998643
No 52
>TIGR01892 AcOrn-deacetyl acetylornithine deacetylase (ArgE). This model represents a clade of acetylornithine deacetylases from proteobacteria. This enzyme is the final step of the "acetylated" ornithine biosynthesis pathway. The enzyme is closely related to dapE, succinyl-diaminopimelate desuccinylase, and outside of this clade annotation is very inaccurate as to which function should be ascribed to genes.
Probab=99.18 E-value=2.8e-10 Score=124.12 Aligned_cols=124 Identities=21% Similarity=0.272 Sum_probs=94.1
Q ss_pred HHHHHHcCCCCCCCCHHHHHHHHHHHHHHHhhccccCCcceEEEEeeeccCCCcccccccccCccccccccceEEEEEcC
Q 005255 92 HVKALTQLGPHAVGSDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYSDLNHIVLRILP 171 (706)
Q Consensus 92 ~L~~L~~igpR~~gS~~~~~a~~yL~~~l~~ig~~~~~~~~vevd~f~~~~g~~~~~g~~~~~~~~~y~~~~NVi~~i~g 171 (706)
.|++|.+|..- .+. ++.++++||.++|+++|. +++.+. ...+ ....|+++++.+
T Consensus 2 ~l~~lv~i~S~-s~~-~~~~~~~~l~~~l~~~G~------~~~~~~--~~~~----------------~~~~nl~~~~~~ 55 (364)
T TIGR01892 2 ILTKLVAFDST-SFR-PNVDLIDWAQAYLEALGF------SVEVQP--FPDG----------------AEKSNLVAVIGP 55 (364)
T ss_pred hHHHhhCcCCc-CCc-cHHHHHHHHHHHHHHcCC------eEEEEe--CCCC----------------CccccEEEEecC
Confidence 46788877432 222 235789999999999983 444432 1100 135799999854
Q ss_pred CCCCCCCCCeEEEeecccccCC--------------------CCCCCCChhHHHHHHHHHHHHHhcCCCCCCcEEEEEeC
Q 005255 172 KYASEAGENAILVSSHIDTVSA--------------------GEGAGDCSSCVAVMLELARVMSQWAHEFKNAVIFLFNT 231 (706)
Q Consensus 172 ~~~~~~~~~~Vll~aH~DSv~~--------------------~pGA~Dd~sgva~~LE~ar~L~~~~~~p~~~I~flf~~ 231 (706)
+ +.+.|++.+|+|+||. ++|+.|+++|++++|.+++.|.+. +.+++|.|+|..
T Consensus 56 ~-----~~~~i~l~~H~Dtvp~~~~~w~~~Pf~~~~~~~~i~GrG~~D~Kg~~a~~l~a~~~l~~~--~~~~~v~~~~~~ 128 (364)
T TIGR01892 56 S-----GAGGLALSGHTDVVPYDDAAWTRDPFRLTEKDGRLYGRGTCDMKGFLACALAAAPDLAAE--QLKKPLHLALTA 128 (364)
T ss_pred C-----CCCeEEEEcccccccCCCCcCCCCCCcceeeCCEEEecCccccchHHHHHHHHHHHHHhc--CcCCCEEEEEEe
Confidence 2 2467999999999974 389999999999999999999875 457899999999
Q ss_pred CCCCCCcChHHHHhcCC
Q 005255 232 GEEEGLNGAHSFVTQHP 248 (706)
Q Consensus 232 ~EE~gl~GS~~f~~~~~ 248 (706)
+||.|..|++.++++..
T Consensus 129 ~EE~g~~G~~~~~~~~~ 145 (364)
T TIGR01892 129 DEEVGCTGAPKMIEAGA 145 (364)
T ss_pred ccccCCcCHHHHHHhcC
Confidence 99999999999996553
No 53
>PRK08651 succinyl-diaminopimelate desuccinylase; Reviewed
Probab=99.16 E-value=5.1e-10 Score=123.66 Aligned_cols=150 Identities=15% Similarity=0.188 Sum_probs=105.7
Q ss_pred CHHHHHHHHHHHHcCCCCCCCCHHHHHHHHHHHHHHHhhccccCCcceEEEEeeeccCCCcccccccccCccccccccce
Q 005255 85 SELEAMKHVKALTQLGPHAVGSDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYSDLNH 164 (706)
Q Consensus 85 s~erA~~~L~~L~~igpR~~gS~~~~~a~~yL~~~l~~ig~~~~~~~~vevd~f~~~~g~~~~~g~~~~~~~~~y~~~~N 164 (706)
..+++.+.|++|.+|..-.....++.++++||.++|+++|. +++++. ...+. . .. ......|
T Consensus 4 ~~~~~~~~l~~lv~i~S~s~~~~~~~~~a~~l~~~l~~~G~------~~~~~~--~~~~~-------~-~~--~~~~~~~ 65 (394)
T PRK08651 4 MMFDIVEFLKDLIKIPTVNPPGENYEEIAEFLRDTLEELGF------STEIIE--VPNEY-------V-KK--HDGPRPN 65 (394)
T ss_pred hHHHHHHHHHHHhcCCccCCCCcCHHHHHHHHHHHHHHcCC------eEEEEe--cCccc-------c-cc--ccCCcce
Confidence 45788999999999854211123456899999999999984 344332 11110 0 00 0012468
Q ss_pred EEEEEcCCCCCCCCCCeEEEeecccccCC--------------------CCCCCCChhHHHHHHHHHHHHHhcCCCCCCc
Q 005255 165 IVLRILPKYASEAGENAILVSSHIDTVSA--------------------GEGAGDCSSCVAVMLELARVMSQWAHEFKNA 224 (706)
Q Consensus 165 Vi~~i~g~~~~~~~~~~Vll~aH~DSv~~--------------------~pGA~Dd~sgva~~LE~ar~L~~~~~~p~~~ 224 (706)
++++. +. .++.|++.+|+|+||. ++|+.||+.|++++|++++.+.+.+ +++
T Consensus 66 ~~~~~-~~-----~~~~ill~~HlDtvp~~~~~~~~~Pf~~~~~~~~~~grG~~D~k~~~~~~l~a~~~l~~~~---~~~ 136 (394)
T PRK08651 66 LIARR-GS-----GNPHLHFNGHYDVVPPGEGWSVNVPFEPKVKDGKVYGRGASDMKGGIAALLAAFERLDPAG---DGN 136 (394)
T ss_pred EEEEe-CC-----CCceEEEEeeeeeecCCCCccccCCCCcEEECCEEEecCccccchHHHHHHHHHHHHHhcC---CCC
Confidence 88864 22 2378999999999974 2788999999999999999998754 789
Q ss_pred EEEEEeCCCCCCCcChHHHHhcCCccCCceEEEEeecCc
Q 005255 225 VIFLFNTGEEEGLNGAHSFVTQHPWSTTIRVAVDLEAMG 263 (706)
Q Consensus 225 I~flf~~~EE~gl~GS~~f~~~~~~~~~v~a~iNLD~~G 263 (706)
|.|+|..+||.|..|++.++++... ....++..|..|
T Consensus 137 v~~~~~~~EE~g~~G~~~~~~~~~~--~~d~~i~~~~~~ 173 (394)
T PRK08651 137 IELAIVPDEETGGTGTGYLVEEGKV--TPDYVIVGEPSG 173 (394)
T ss_pred EEEEEecCccccchhHHHHHhccCC--CCCEEEEecCCC
Confidence 9999999999998999999965432 234566666544
No 54
>PRK05111 acetylornithine deacetylase; Provisional
Probab=99.16 E-value=6.1e-10 Score=122.61 Aligned_cols=129 Identities=20% Similarity=0.284 Sum_probs=97.6
Q ss_pred HHHHHHHHHHHHcCCCCCCCC-----HHHHHHHHHHHHHHHhhccccCCcceEEEEeeeccCCCcccccccccCcccccc
Q 005255 86 ELEAMKHVKALTQLGPHAVGS-----DALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYS 160 (706)
Q Consensus 86 ~erA~~~L~~L~~igpR~~gS-----~~~~~a~~yL~~~l~~ig~~~~~~~~vevd~f~~~~g~~~~~g~~~~~~~~~y~ 160 (706)
.++..+.+++|.++..- .+. .++.++.+||.++|+++|. +++.+. .. + ..
T Consensus 4 ~~~~i~~l~~lv~i~s~-s~~e~~~~~~~~~~~~~l~~~l~~~g~------~~~~~~--~~-~---------------~~ 58 (383)
T PRK05111 4 LPSFIEMYRALIATPSI-SATDPALDQSNRAVIDLLAGWFEDLGF------NVEIQP--VP-G---------------TR 58 (383)
T ss_pred chHHHHHHHHHhCcCCc-CCCCcccccchHHHHHHHHHHHHHCCC------eEEEEe--cC-C---------------CC
Confidence 35789999999987442 222 1235799999999999983 444331 10 0 01
Q ss_pred ccceEEEEEcCCCCCCCCCCeEEEeecccccCC--------------------CCCCCCChhHHHHHHHHHHHHHhcCCC
Q 005255 161 DLNHIVLRILPKYASEAGENAILVSSHIDTVSA--------------------GEGAGDCSSCVAVMLELARVMSQWAHE 220 (706)
Q Consensus 161 ~~~NVi~~i~g~~~~~~~~~~Vll~aH~DSv~~--------------------~pGA~Dd~sgva~~LE~ar~L~~~~~~ 220 (706)
+..|+++++ |+ ..+.|++.+|+|+||. ++|+.|++++++++|++++.|.+. .
T Consensus 59 ~~~nvia~~-g~-----~~~~il~~~H~Dvvp~~~~~W~~~Pf~~~~~~g~i~GrG~~D~Kg~~a~~l~a~~~l~~~--~ 130 (383)
T PRK05111 59 GKFNLLASL-GS-----GEGGLLLAGHTDTVPFDEGRWTRDPFTLTEHDGKLYGLGTADMKGFFAFILEALRDIDLT--K 130 (383)
T ss_pred CCceEEEEe-CC-----CCCeEEEEeeeceecCCCCcCcCCCCccEEECCEEEecccccccHHHHHHHHHHHHHhhc--C
Confidence 347999998 43 1246999999999973 489999999999999999999864 3
Q ss_pred CCCcEEEEEeCCCCCCCcChHHHHhcC
Q 005255 221 FKNAVIFLFNTGEEEGLNGAHSFVTQH 247 (706)
Q Consensus 221 p~~~I~flf~~~EE~gl~GS~~f~~~~ 247 (706)
++++|.|+|.++||.|..|++.++++.
T Consensus 131 ~~~~i~~~~~~~EE~g~~G~~~~~~~~ 157 (383)
T PRK05111 131 LKKPLYILATADEETSMAGARAFAEAT 157 (383)
T ss_pred CCCCeEEEEEeccccCcccHHHHHhcC
Confidence 567899999999999999999999653
No 55
>TIGR01882 peptidase-T peptidase T. This model represents a tripeptide aminopeptidase known as Peptidase T, which has a substrate preference for hydrophobic peptides.
Probab=99.15 E-value=4.4e-10 Score=125.43 Aligned_cols=128 Identities=16% Similarity=0.191 Sum_probs=95.8
Q ss_pred HHHHHHHHHHHcCCCCCC-------CCHHHHHHHHHHHHHHHhhccccCCcceEEEEeeeccCCCcccccccccCccccc
Q 005255 87 LEAMKHVKALTQLGPHAV-------GSDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIY 159 (706)
Q Consensus 87 erA~~~L~~L~~igpR~~-------gS~~~~~a~~yL~~~l~~ig~~~~~~~~vevd~f~~~~g~~~~~g~~~~~~~~~y 159 (706)
+|+.+.+-++++|..... .+..+++.++||+++|+++|.+ ++++|
T Consensus 3 ~~~~~~f~~~~~i~s~s~~~~~~~ps~~~~~~~a~~l~~~l~~lG~~-----~v~~d----------------------- 54 (410)
T TIGR01882 3 EELLPRFLTYVKVNTRSDENSDTCPSTPGQLTFGNMLVDDLKSLGLQ-----DAHYD----------------------- 54 (410)
T ss_pred hHHHHHHHhhEEEecccCCCCCCCCCCHhHHHHHHHHHHHHHHcCCc-----eEEEc-----------------------
Confidence 678888888888744221 1224457999999999999941 35554
Q ss_pred cccceEEEEEcCCCCCCCCCCeEEEeecccccCC----------------------------------------------
Q 005255 160 SDLNHIVLRILPKYASEAGENAILVSSHIDTVSA---------------------------------------------- 193 (706)
Q Consensus 160 ~~~~NVi~~i~g~~~~~~~~~~Vll~aH~DSv~~---------------------------------------------- 193 (706)
.+..||+++++|.. ..+.+.|++.||+|||+.
T Consensus 55 ~~~gnv~~~~~~~~--~~~~~~i~~~aHmDTv~~~~~~v~p~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~ 132 (410)
T TIGR01882 55 EKNGYVIATIPSNT--DKDVPTIGFLAHVDTADFNGENVNPQIIENYDGESIIQLGDLEFTLDPDQFPNLSGYKGQTLIT 132 (410)
T ss_pred CCceEEEEEecCCC--CCCCCEEEEEEecccCcCCCCCCCCEEEecCCCceeeecCCCCeEEChHhChhHHhccCceEEE
Confidence 13689999997742 112488999999999973
Q ss_pred CCC----CCCChhHHHHHHHHHHHHHhcCCCCCCcEEEEEeCCCCCCCcChHHHHh
Q 005255 194 GEG----AGDCSSCVAVMLELARVMSQWAHEFKNAVIFLFNTGEEEGLNGAHSFVT 245 (706)
Q Consensus 194 ~pG----A~Dd~sgva~~LE~ar~L~~~~~~p~~~I~flf~~~EE~gl~GS~~f~~ 245 (706)
+.| +.||++|+|+||++++.|.+.+..++.+|.|+|..+||.| .|++.+..
T Consensus 133 ~~g~~l~G~D~KgglAa~l~A~~~L~e~~~~~~g~I~~~ft~dEE~g-~Ga~~l~~ 187 (410)
T TIGR01882 133 TDGTTLLGADDKAGIAEIMTAADYLINHPEIKHGTIRVAFTPDEEIG-RGAHKFDV 187 (410)
T ss_pred cCCCEeecccCHHHHHHHHHHHHHHHhCCCCCCCCEEEEEECcccCC-cCcchhhh
Confidence 112 2699999999999999998853345779999999999987 59988863
No 56
>PRK06156 hypothetical protein; Provisional
Probab=99.15 E-value=1.2e-09 Score=125.66 Aligned_cols=138 Identities=14% Similarity=0.198 Sum_probs=102.8
Q ss_pred CHHHHHHHHHHHHcCCC-CCCC-----CHHHHHHHHHHHHHHHhhccccCCcceEEEEeeeccCCCcccccccccCcccc
Q 005255 85 SELEAMKHVKALTQLGP-HAVG-----SDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLI 158 (706)
Q Consensus 85 s~erA~~~L~~L~~igp-R~~g-----S~~~~~a~~yL~~~l~~ig~~~~~~~~vevd~f~~~~g~~~~~g~~~~~~~~~ 158 (706)
..+++.+.|++|.+|.. .+.+ .++.....+||.+++++.|. +++.
T Consensus 44 ~~~~~~~~l~~lv~i~S~~~~~~~~~e~~~~~~~~~~l~~~l~~~G~------~~~~----------------------- 94 (520)
T PRK06156 44 YGAAAIESLRELVAFPTVRVEGVPQHENPEFIGFKKLLKSLARDFGL------DYRN----------------------- 94 (520)
T ss_pred hHHHHHHHHHHhcCcCcccCCCCCccCCccHHHHHHHHHHHHHHCCC------eEEe-----------------------
Confidence 45688899999998754 2111 12224567999999999883 2221
Q ss_pred ccccceEE-EEEcCCCCCCCCCCeEEEeecccccCC-------------------------CCCCCCChhHHHHHHHHHH
Q 005255 159 YSDLNHIV-LRILPKYASEAGENAILVSSHIDTVSA-------------------------GEGAGDCSSCVAVMLELAR 212 (706)
Q Consensus 159 y~~~~NVi-~~i~g~~~~~~~~~~Vll~aH~DSv~~-------------------------~pGA~Dd~sgva~~LE~ar 212 (706)
...||+ ++++|+ ..+.|++++|+|+||. ++|+.|++.|+++++++++
T Consensus 95 --~~~~v~~~~~~g~-----~~~~l~l~gH~DvVp~~~~~W~~~~~~~~Pf~~~~~~g~lyGRG~~D~Kgg~a~~l~a~~ 167 (520)
T PRK06156 95 --VDNRVLEIGLGGS-----GSDKVGILTHADVVPANPELWVLDGTRLDPFKVTLVGDRLYGRGTEDDKGAIVTALYAMK 167 (520)
T ss_pred --cCCeEEEEEecCC-----CCCeEEEEEecCccCCCCccCccCCccCCCCceEEECCEEEEcCcccchHHHHHHHHHHH
Confidence 112444 666553 2368999999999973 2789999999999999999
Q ss_pred HHHhcCCCCCCcEEEEEeCCCCCCCcChHHHHhcCCccCCceEEEEeec
Q 005255 213 VMSQWAHEFKNAVIFLFNTGEEEGLNGAHSFVTQHPWSTTIRVAVDLEA 261 (706)
Q Consensus 213 ~L~~~~~~p~~~I~flf~~~EE~gl~GS~~f~~~~~~~~~v~a~iNLD~ 261 (706)
.|.+.+.+++++|.|+|+.+||.|..|++.+..++. ....++|+|+
T Consensus 168 ~l~~~~~~~~~~i~~~~~~dEE~g~~G~~~~~~~~~---~~~~~~~~D~ 213 (520)
T PRK06156 168 AIKDSGLPLARRIELLVYTTEETDGDPLKYYLERYT---PPDYNITLDA 213 (520)
T ss_pred HHHHcCCCCCceEEEEEecccccCchhHHHHHHhcC---CCCeEEeeCC
Confidence 998887777889999999999999999999996543 2356677775
No 57
>PRK08554 peptidase; Reviewed
Probab=99.14 E-value=7e-10 Score=124.99 Aligned_cols=141 Identities=16% Similarity=0.224 Sum_probs=103.9
Q ss_pred HHHHHHHHHHcCCCCCCC---CHHHHHHHHHHHHHHHhhccccCCcceEEEEeeeccCCCcccccccccCccccccccce
Q 005255 88 EAMKHVKALTQLGPHAVG---SDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYSDLNH 164 (706)
Q Consensus 88 rA~~~L~~L~~igpR~~g---S~~~~~a~~yL~~~l~~ig~~~~~~~~vevd~f~~~~g~~~~~g~~~~~~~~~y~~~~N 164 (706)
++.+.|++|.++.....+ ..+..++.+|+.+++++.|. +++.. .. .+..|
T Consensus 2 ~~~~~l~~LV~i~S~~~~~~~~~~~~~~~~~l~~~l~~~G~------~~~~~--~~-------------------~~~~~ 54 (438)
T PRK08554 2 DVLELLSSLVSFETVNDPSKGIKPSKECPKFIKDTLESWGI------ESELI--EK-------------------DGYYA 54 (438)
T ss_pred hHHHHHHHHhCCCCCCCcccCcchHHHHHHHHHHHHHHCCC------eEEEE--ec-------------------CCceE
Confidence 457788999887542211 22356899999999999983 33321 11 02368
Q ss_pred EEEEEcCCCCCCCCCCeEEEeecccccCC--------------------CCCCCCChhHHHHHHHHHHHHHhcCCCCCCc
Q 005255 165 IVLRILPKYASEAGENAILVSSHIDTVSA--------------------GEGAGDCSSCVAVMLELARVMSQWAHEFKNA 224 (706)
Q Consensus 165 Vi~~i~g~~~~~~~~~~Vll~aH~DSv~~--------------------~pGA~Dd~sgva~~LE~ar~L~~~~~~p~~~ 224 (706)
+++++ |+ .++.|++.+|+|+||. ++|+.||++|++++|.+++.|.+. .++++
T Consensus 55 l~~~~-~~-----~~~~l~l~gH~DtVp~~~~~w~~~Pf~~~~~~g~lyGrG~~DmKgg~aa~l~A~~~l~~~--~~~~~ 126 (438)
T PRK08554 55 VYGEI-GE-----GKPKLLFMAHFDVVPVNPEEWNTEPFKLTVKGDKAYGRGSADDKGNVASVMLALKELSKE--PLNGK 126 (438)
T ss_pred EEEEe-CC-----CCCEEEEEeccccCCCCccccccCCceeEEECCEEEECCcccchHHHHHHHHHHHHHHhc--CCCCC
Confidence 88886 32 2357999999999974 399999999999999999999764 36788
Q ss_pred EEEEEeCCCCCCCcChHHHHhcCC-ccCCceEEEEeecCc
Q 005255 225 VIFLFNTGEEEGLNGAHSFVTQHP-WSTTIRVAVDLEAMG 263 (706)
Q Consensus 225 I~flf~~~EE~gl~GS~~f~~~~~-~~~~v~a~iNLD~~G 263 (706)
|.|+|+.+||.|..++..+.++.. ......++|+.|..+
T Consensus 127 i~l~~~~dEE~g~~~~~~~~~~~~~~~~~~~~~iv~Ept~ 166 (438)
T PRK08554 127 VIFAFTGDEEIGGAMAMHIAEKLREEGKLPKYMINADGIG 166 (438)
T ss_pred EEEEEEcccccCccccHHHHHHHHhcCCCCCEEEEeCCCC
Confidence 999999999999877777664432 234568899999865
No 58
>PRK13009 succinyl-diaminopimelate desuccinylase; Reviewed
Probab=99.13 E-value=6.2e-10 Score=122.10 Aligned_cols=137 Identities=16% Similarity=0.167 Sum_probs=100.8
Q ss_pred HHHHHHHHHHcCCCCCCCCHHHHHHHHHHHHHHHhhccccCCcceEEEEeeeccCCCcccccccccCccccccccceEEE
Q 005255 88 EAMKHVKALTQLGPHAVGSDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYSDLNHIVL 167 (706)
Q Consensus 88 rA~~~L~~L~~igpR~~gS~~~~~a~~yL~~~l~~ig~~~~~~~~vevd~f~~~~g~~~~~g~~~~~~~~~y~~~~NVi~ 167 (706)
++.+.+++|.++. .-|+.+.++.+||.++|+++|. +++.. .. ....|+++
T Consensus 3 ~~~~~l~~Lv~ip---s~s~~e~~~~~~l~~~l~~~G~------~~~~~--~~-------------------~~~~n~~~ 52 (375)
T PRK13009 3 DVLELAQDLIRRP---SVTPDDAGCQDLLAERLEALGF------TCERM--DF-------------------GDVKNLWA 52 (375)
T ss_pred hHHHHHHHHhCCC---CCCCchhhHHHHHHHHHHHcCC------eEEEe--cc-------------------CCCcEEEE
Confidence 4677888888763 2344567889999999999983 33321 10 13479999
Q ss_pred EEcCCCCCCCCCCeEEEeecccccCC---------------------CCCCCCChhHHHHHHHHHHHHHhcCCCCCCcEE
Q 005255 168 RILPKYASEAGENAILVSSHIDTVSA---------------------GEGAGDCSSCVAVMLELARVMSQWAHEFKNAVI 226 (706)
Q Consensus 168 ~i~g~~~~~~~~~~Vll~aH~DSv~~---------------------~pGA~Dd~sgva~~LE~ar~L~~~~~~p~~~I~ 226 (706)
++ |. +.+.|++++|+|+||. ++|+.||++|+++++++++.+.+.+.+++++|+
T Consensus 53 ~~-g~-----~~~~i~l~~H~D~Vp~g~~~~w~~~Pf~~~~~~g~iyGrG~~D~Kgg~aa~l~a~~~l~~~~~~~~~~i~ 126 (375)
T PRK13009 53 RR-GT-----EGPHLCFAGHTDVVPPGDLEAWTSPPFEPTIRDGMLYGRGAADMKGSLAAFVVAAERFVAAHPDHKGSIA 126 (375)
T ss_pred Ee-cC-----CCCEEEEEeecccCCCCCcccCCCCCCCcEEECCEEEecCCccChHHHHHHHHHHHHHHHhcCCCCceEE
Confidence 87 42 3478999999999984 268999999999999999999887777889999
Q ss_pred EEEeCCCCCCC-cChHHHHhcCCc-cCCceEEEEee
Q 005255 227 FLFNTGEEEGL-NGAHSFVTQHPW-STTIRVAVDLE 260 (706)
Q Consensus 227 flf~~~EE~gl-~GS~~f~~~~~~-~~~v~a~iNLD 260 (706)
|++..+||.+. .|++.+.+.... .....+++..|
T Consensus 127 ~~~~~~EE~~~~~G~~~~~~~~~~~~~~~d~~i~~e 162 (375)
T PRK13009 127 FLITSDEEGPAINGTVKVLEWLKARGEKIDYCIVGE 162 (375)
T ss_pred EEEEeecccccccCHHHHHHHHHHcCcCCCEEEEcC
Confidence 99999999854 699988743211 12345555555
No 59
>TIGR03106 trio_M42_hydro hydrolase, peptidase M42 family. This model describes a subfamily of MEROPS peptidase family M42, a glutamyl aminopeptidase family that also includes the cellulase CelM from Clostridium thermocellum and deblocking aminopeptidases that can remove acylated amino acids. Members of this family occur in a three gene cassette with an amidotransferase (TIGR03104)in the asparagine synthase (glutamine-hydrolyzing) family, and a probable acetyltransferase (TIGR03103) in the GNAT family.
Probab=99.12 E-value=5.2e-09 Score=114.17 Aligned_cols=147 Identities=16% Similarity=0.209 Sum_probs=90.4
Q ss_pred CCCChhHHHHHHHHHHHHHhcCCCCCCcEEEEEeCCCCCCCcChHHHHhcCCccCCceEEEEeecCcC--------CCCc
Q 005255 197 AGDCSSCVAVMLELARVMSQWAHEFKNAVIFLFNTGEEEGLNGAHSFVTQHPWSTTIRVAVDLEAMGI--------GGRS 268 (706)
Q Consensus 197 A~Dd~sgva~~LE~ar~L~~~~~~p~~~I~flf~~~EE~gl~GS~~f~~~~~~~~~v~a~iNLD~~G~--------gg~~ 268 (706)
+.||++||+++++++|.|.+.+.+++.+++|+|+.+||.| .|+..- ...+...+|.+|.... .|+.
T Consensus 181 ~~D~K~G~a~~l~~~~~l~~~~~~~~~~v~~~~t~qEEvG-~gaa~~-----i~pd~a~~i~vd~~~~~p~~~~lg~Gp~ 254 (343)
T TIGR03106 181 HLDDKAGVAALLAALKAIVEHKVPLPVDVHPLFTITEEVG-SGASHA-----LPPDVAELVSVDNGTVAPGQNSSEHGVT 254 (343)
T ss_pred ecccHHhHHHHHHHHHHHHhcCCCCCceEEEEEECCcccC-ccchhc-----ccHhhhccEEEEecccCCCCCcCCCCce
Confidence 4899999999999999999876678899999999999999 563211 1122333466664422 1222
Q ss_pred cccc--cCC-CHHHHHHHHHHccCCCCcccccccccCCCCCCCCchHHHhhc-CCCeEEEEEeecCCCCCCCcCCCcCCC
Q 005255 269 ALFQ--AGP-NLWAVENFAAVAKYPSGQIIGQDLFASGVFETATDFQVYTEV-AGLSGLDFAYTDKSAVYHTKNDRLDLL 344 (706)
Q Consensus 269 ~lfq--~g~-~~~li~~y~~~a~~p~~~~l~~e~f~~g~ips~TD~~~F~~~-~GiPgld~a~~~~~~~YHT~~Dt~d~i 344 (706)
+... .++ ++.+.+...+.|+. .+-..-.+++.. .+||-..+... .|+|...+.. ..+ +-|| .+.+
T Consensus 255 i~~~d~~~~~~~~l~~~l~~~A~~-~~Ip~Q~~~~~~----~gtDa~~~~~~~~Gi~t~~i~i-P~R-y~Hs----~e~~ 323 (343)
T TIGR03106 255 IAMADSSGPFDYHLTRKLIRLCQD-HGIPHRRDVFRY----YRSDAASAVEAGHDIRTALVTF-GLD-ASHG----YERT 323 (343)
T ss_pred EEEecCCCCCCHHHHHHHHHHHHH-cCCCcEEEecCC----CCChHHHHHHcCCCCCEEEeec-ccc-chhh----hhhc
Confidence 2122 222 67777666665432 221111223221 35666665432 6899987753 222 3477 7888
Q ss_pred CHHHHHHHHHHHHHHH
Q 005255 345 KPGSLQHLGENMLDFL 360 (706)
Q Consensus 345 d~~sLq~~g~~~l~ll 360 (706)
+.+.++++.+.+.+++
T Consensus 324 ~~~D~~~~~~Ll~~~~ 339 (343)
T TIGR03106 324 HIDALEALANLLVAYA 339 (343)
T ss_pred cHHHHHHHHHHHHHHh
Confidence 8899988777665554
No 60
>COG0624 ArgE Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases [Amino acid transport and metabolism]
Probab=99.12 E-value=8.3e-10 Score=122.85 Aligned_cols=145 Identities=20% Similarity=0.251 Sum_probs=112.9
Q ss_pred HHHHHHHHHHHcCCCCCCCCHHHHHHHHHHHHHHHhhccccCCcceEEEEeeeccCCCcccccccccCccccccccceEE
Q 005255 87 LEAMKHVKALTQLGPHAVGSDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYSDLNHIV 166 (706)
Q Consensus 87 erA~~~L~~L~~igpR~~gS~~~~~a~~yL~~~l~~ig~~~~~~~~vevd~f~~~~g~~~~~g~~~~~~~~~y~~~~NVi 166 (706)
+++.+.|+++.++.... ..++.++++|+.++|++++. +++.+.+... ....|++
T Consensus 13 ~~~~~~l~~lv~~~s~s--~~~~~~~~~~l~~~l~~~g~------~~~~~~~~~~------------------~~~~n~~ 66 (409)
T COG0624 13 DDILELLKELVRIPSVS--AGEEAEAAELLAEWLEELGF------EVEEDEVGPG------------------PGRPNLV 66 (409)
T ss_pred HHHHHHHHHHhcCCCCC--cccchHHHHHHHHHHHHcCC------ceEEeecCCC------------------CCceEEE
Confidence 45567888888764332 36677999999999999984 3444321100 0356999
Q ss_pred EEEcCCCCCCCCCCeEEEeecccccCC---------------------CCCCCCChhHHHHHHHHHHHHHhcCCCCCCcE
Q 005255 167 LRILPKYASEAGENAILVSSHIDTVSA---------------------GEGAGDCSSCVAVMLELARVMSQWAHEFKNAV 225 (706)
Q Consensus 167 ~~i~g~~~~~~~~~~Vll~aH~DSv~~---------------------~pGA~Dd~sgva~~LE~ar~L~~~~~~p~~~I 225 (706)
+++.+. ..++.|++++|+|+||. ++|+.||+.++++++.+++.+.+.+..++.+|
T Consensus 67 ~~~~~~----~~~~~l~l~~H~DvVP~g~~~~W~~~Pf~~~~~dg~lyGRG~~D~KG~~~a~l~A~~~l~~~~~~~~~~v 142 (409)
T COG0624 67 ARLGGG----DGGPTLLLGGHLDVVPAGGGEDWTTDPFEPTIKDGKLYGRGAADMKGGLAAALYALSALKAAGGELPGDV 142 (409)
T ss_pred EEecCC----CCCCeEEEeccccccCCCCcccCccCCCccEEECCEEEecCccccchHHHHHHHHHHHHHHhCCCCCeEE
Confidence 999875 22389999999999986 38999999999999999999999777888999
Q ss_pred EEEEeCCCCCCCcChHHHHhcCCc--cCCceEEEEeec
Q 005255 226 IFLFNTGEEEGLNGAHSFVTQHPW--STTIRVAVDLEA 261 (706)
Q Consensus 226 ~flf~~~EE~gl~GS~~f~~~~~~--~~~v~a~iNLD~ 261 (706)
.+++..+||.|..|...+..++.. .....+.+..|.
T Consensus 143 ~~~~~~dEE~g~~~~~~~~~~~~~~~~~~~d~~i~~E~ 180 (409)
T COG0624 143 RLLFTADEESGGAGGKAYLEEGEEALGIRPDYEIVGEP 180 (409)
T ss_pred EEEEEeccccCCcchHHHHHhcchhhccCCCEEEeCCC
Confidence 999999999999999999976542 345677788886
No 61
>PF01546 Peptidase_M20: Peptidase family M20/M25/M40 This family only corresponds to M20 family; InterPro: IPR002933 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This group of proteins contains the metallopeptidases and non-peptidase homologues (amidohydrolases) that belong to the MEROPS peptidase family M20 (clan MH) []. The peptidases of this clan have two catalytic zinc ions at the active site, bound by His/Asp, Asp, Glu, Asp/Glu and His. The catalysed reaction involves the release of an N-terminal amino acid, usually neutral or hydrophobic, from a polypeptide []. The peptidase M20 family has four sub-families: M20A - type example, glutamate carboxypeptidase from Pseudomonas sp. RS16 (P06621 from SWISSPROT) M20B - type example, peptidase T from Escherichia coli (P29745 from SWISSPROT) M20C - type example, X-His dipeptidase from E. coli (P15288 from SWISSPROT) M20D - type example, carboxypeptidase Ss1 from Sulfolobus solfataricus (P80092 from SWISSPROT) ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3T68_A 3T6M_A 2F8H_A 3GB0_A 3IO1_B 2ZOF_A 2ZOG_B 3MRU_B 3N5F_A 1Z2L_B ....
Probab=99.10 E-value=5e-10 Score=110.25 Aligned_cols=165 Identities=23% Similarity=0.304 Sum_probs=114.9
Q ss_pred EEeecccccCC-------------------CCCCCCChhHHHHHHHHHHHHHhcCCCCCCcEEEEEeCCCCCCCc-ChHH
Q 005255 183 LVSSHIDTVSA-------------------GEGAGDCSSCVAVMLELARVMSQWAHEFKNAVIFLFNTGEEEGLN-GAHS 242 (706)
Q Consensus 183 ll~aH~DSv~~-------------------~pGA~Dd~sgva~~LE~ar~L~~~~~~p~~~I~flf~~~EE~gl~-GS~~ 242 (706)
++.+|+|+||. ++|+.|++.++++++.+++.|.+.+.+++++|.|+|+.+||.|.. |++.
T Consensus 1 ll~~H~Dtv~~~~~w~~~pf~~~~~~~~~~grG~~D~k~~~~~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~~~g~~~ 80 (189)
T PF01546_consen 1 LLYAHMDTVPGPEGWKHDPFELSIEDGRLYGRGADDMKGGIAAMLAALKALKESGDDLPGNIIFLFTPDEEIGSIGGAKH 80 (189)
T ss_dssp EEEEES-BCSTGGGSSSSTTSEEEETTEEESTTTTTTHHHHHHHHHHHHHHHHTTTTCSSEEEEEEESTCCGTSTTHHHH
T ss_pred CccccccccCCcCcCCCCCcccEEECCEEEcCCcCCCcccHHHHHHHHHHHHhccccccccccccccccccCCCcchhhh
Confidence 68999999992 589999999999999999999987789999999999999999998 9999
Q ss_pred HHhcCC-ccCCceEEEEeecCcCCCCccccccCCCHHHHHHHHHHccCCCCcccccccccCCCCCCCCchHHHhh--cCC
Q 005255 243 FVTQHP-WSTTIRVAVDLEAMGIGGRSALFQAGPNLWAVENFAAVAKYPSGQIIGQDLFASGVFETATDFQVYTE--VAG 319 (706)
Q Consensus 243 f~~~~~-~~~~v~a~iNLD~~G~gg~~~lfq~g~~~~li~~y~~~a~~p~~~~l~~e~f~~g~ips~TD~~~F~~--~~G 319 (706)
++++.. ...+....+..|..+.+.-. +..++.+.+...++.+...+..... ...+..+|...+.+ ..+
T Consensus 81 l~~~~~~~~~~~~~~~~~e~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~g~tD~~~~~~~~~~~ 151 (189)
T PF01546_consen 81 LLEEGAFFGLHPDYVIIGEPTGKGGVG----SDNDPPLVQALQAAAQEVGGEPPEP-----VASGGGTDAGFLAEVKGLG 151 (189)
T ss_dssp HHHHCEEEEEEESEEEECECETTSEEE----HCTCHHHHHHHHHHHHHTTSSEEEE-----EEESSSSTHHHHHCHHHTT
T ss_pred hhhhccccccccccccccccccccccc----ccccHHHHHHHHHHHHHHhhccccc-----cceeccccchhhhhhhccc
Confidence 997631 12235666666655443211 2235556666655543333211111 13456899999985 368
Q ss_pred CeEEEEEeecCCCCCCCcCCCcCCCCHHHHHHHHHHHHHHHH
Q 005255 320 LSGLDFAYTDKSAVYHTKNDRLDLLKPGSLQHLGENMLDFLL 361 (706)
Q Consensus 320 iPgld~a~~~~~~~YHT~~Dt~d~id~~sLq~~g~~~l~ll~ 361 (706)
+|.+.+.... ...|++. |+++.+.+....+.+..+++
T Consensus 152 ~~~i~~G~~~--~~~H~~~---E~i~~~~l~~~~~~~~~~l~ 188 (189)
T PF01546_consen 152 IPAIGFGPGG--SNAHTPD---EYIDIEDLVKGAKIYAALLE 188 (189)
T ss_dssp EEEEEEESCE--ESTTSTT----EEEHHHHHHHHHHHHHHHH
T ss_pred cceeeeCCCC--CCCCCCC---cEecHHHHHHHHHHHHHHHh
Confidence 8888765443 5678855 45668888887777766654
No 62
>TIGR01886 dipeptidase dipeptidase PepV. This model represents a small clade of dipeptidase enzymes which are members of the larger M25 subfamily of metalloproteases. Two characterized enzymes are included in the seed. One, from Lactococcus lactis has been shown to act on a wide range of dipeptides, but not larger peptides. The enzyme from Lactobacillus delbrueckii was originally characterized as a Xaa-His dipeptidase, specifically a carnosinase (beta-Ala-His) by complementation of an E. coli mutant. Further study, including the crystallization of the enzyme, has shown it to also be a non-specific dipeptidase. This group also includes enzymes from Streptococcus and Enterococcus.
Probab=99.09 E-value=8.4e-10 Score=125.27 Aligned_cols=126 Identities=14% Similarity=0.149 Sum_probs=96.3
Q ss_pred HHHHHHHHHHHcCCCCCC---------CCHHHHHHHHHHHHHHHhhccccCCcceEEEEeeeccCCCcccccccccCccc
Q 005255 87 LEAMKHVKALTQLGPHAV---------GSDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTL 157 (706)
Q Consensus 87 erA~~~L~~L~~igpR~~---------gS~~~~~a~~yL~~~l~~ig~~~~~~~~vevd~f~~~~g~~~~~g~~~~~~~~ 157 (706)
+++.+.|++|.++..-.. ...+..++.+|+.+.++++|. +++..
T Consensus 13 ~~~~~~l~~lv~ipS~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~G~------~~~~~--------------------- 65 (466)
T TIGR01886 13 DALLEDLEELLRIDSSEDLENATEEYPFGPGPVDALTKFLSFAERDGF------TTKNF--------------------- 65 (466)
T ss_pred HHHHHHHHHHhCCCCcCCCCCCCccCCCChhHHHHHHHHHHHHHHCCC------eEEEe---------------------
Confidence 577888999988754211 123456799999999999983 33321
Q ss_pred cccccceEEEEEcCCCCCCCCCCeEEEeecccccCC-------------------CCCCCCChhHHHHHHHHHHHHHhcC
Q 005255 158 IYSDLNHIVLRILPKYASEAGENAILVSSHIDTVSA-------------------GEGAGDCSSCVAVMLELARVMSQWA 218 (706)
Q Consensus 158 ~y~~~~NVi~~i~g~~~~~~~~~~Vll~aH~DSv~~-------------------~pGA~Dd~sgva~~LE~ar~L~~~~ 218 (706)
.|+++++.+. .+++.|++.+|+|+||. ++|+.||+.|+++++.+++.|.+.+
T Consensus 66 -----~~~~~~~~~~----~~~~~l~~~gH~DvVp~~~~W~~~Pf~~~~~dg~lyGRG~~D~Kg~~~a~l~a~~~l~~~~ 136 (466)
T TIGR01886 66 -----DNYAGHVEYG----AGDERLGIIGHMDVVPAGEGWTRDPFEPEIDEGRIYARGASDDKGPSLAAYYAMKILKELG 136 (466)
T ss_pred -----cCCceeEEec----CCCCEEEEEeecccCCCCCCCcCCCCCeEEECCEEEecCccccchHHHHHHHHHHHHHHhC
Confidence 1222222221 23468999999999975 4899999999999999999999888
Q ss_pred CCCCCcEEEEEeCCCCCCCcChHHHHhcCC
Q 005255 219 HEFKNAVIFLFNTGEEEGLNGAHSFVTQHP 248 (706)
Q Consensus 219 ~~p~~~I~flf~~~EE~gl~GS~~f~~~~~ 248 (706)
.+++++|.|++..+||.|..|++.++++++
T Consensus 137 ~~~~~~i~~~~~~dEE~g~~g~~~~~~~~~ 166 (466)
T TIGR01886 137 LPPSKKIRFVVGTNEETGWVDMDYYFKHEE 166 (466)
T ss_pred CCCCCCEEEEEECccccCcccHHHHHhcCc
Confidence 788999999999999999999999997654
No 63
>PRK13004 peptidase; Reviewed
Probab=99.08 E-value=2e-09 Score=119.59 Aligned_cols=123 Identities=18% Similarity=0.234 Sum_probs=95.7
Q ss_pred HHHHHHHHHHHHcCCCCCCCCHHHHHHHHHHHHHHHhhccccCCcceEEEEeeeccCCCcccccccccCccccccccceE
Q 005255 86 ELEAMKHVKALTQLGPHAVGSDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYSDLNHI 165 (706)
Q Consensus 86 ~erA~~~L~~L~~igpR~~gS~~~~~a~~yL~~~l~~ig~~~~~~~~vevd~f~~~~g~~~~~g~~~~~~~~~y~~~~NV 165 (706)
.+++.+.+++|.++.. -|.++.++.+||.++|+++|.+ ..+++ ...|+
T Consensus 14 ~~~~~~~l~~lv~ips---~s~~e~~~a~~l~~~l~~~G~~-----~~~~~------------------------~~~n~ 61 (399)
T PRK13004 14 KADMTRFLRDLIRIPS---ESGDEKRVVKRIKEEMEKVGFD-----KVEID------------------------PMGNV 61 (399)
T ss_pred HHHHHHHHHHHhcCCC---CCCchHHHHHHHHHHHHHcCCc-----EEEEc------------------------CCCeE
Confidence 3678889999988632 3445568899999999999841 01111 23588
Q ss_pred EEEEcCCCCCCCCCCeEEEeecccccCC---------------------CCCCCCChhHHHHHHHHHHHHHhcCCCCCCc
Q 005255 166 VLRILPKYASEAGENAILVSSHIDTVSA---------------------GEGAGDCSSCVAVMLELARVMSQWAHEFKNA 224 (706)
Q Consensus 166 i~~i~g~~~~~~~~~~Vll~aH~DSv~~---------------------~pGA~Dd~sgva~~LE~ar~L~~~~~~p~~~ 224 (706)
++++.+. + +.|++.+|+|+||. ++|+.||++|++++|.+++.|.+.+..++.+
T Consensus 62 ~a~~~~~-----~-~~i~~~~H~DtVp~~~~~~w~~~P~~~~~~~g~lyGrG~~D~Kg~~aa~l~a~~~l~~~~~~~~~~ 135 (399)
T PRK13004 62 LGYIGHG-----K-KLIAFDAHIDTVGIGDIKNWDFDPFEGEEDDGRIYGRGTSDQKGGMASMVYAAKIIKDLGLDDEYT 135 (399)
T ss_pred EEEECCC-----C-cEEEEEeccCccCCCChhhcccCCCccEEECCEEEeCCccccchHHHHHHHHHHHHHhcCCCCCCe
Confidence 9988542 2 67999999999985 2689999999999999999999887778899
Q ss_pred EEEEEeCCCCC-CCcChHHHHhc
Q 005255 225 VIFLFNTGEEE-GLNGAHSFVTQ 246 (706)
Q Consensus 225 I~flf~~~EE~-gl~GS~~f~~~ 246 (706)
|.|+|..+||. +..|++.++++
T Consensus 136 i~~~~~~~EE~~~g~~~~~~~~~ 158 (399)
T PRK13004 136 LYVTGTVQEEDCDGLCWRYIIEE 158 (399)
T ss_pred EEEEEEcccccCcchhHHHHHHh
Confidence 99999999996 45778877754
No 64
>TIGR01902 dapE-lys-deAc N-acetyl-ornithine/N-acetyl-lysine deacetylase. This clade of mainly archaeal and related bacterial species contains two characterized enzymes, an deacetylase with specificity for both N-acetyl-ornithine and N-acetyl-lysine from Thermus which is found within a lysine biosynthesis operon, and a fusion protein with acetyl-glutamate kinase (an enzyme of ornithine biosynthesis) from Lactobacillus. It is possible that all of the sequences within this clade have dual specificity, or that a mix of specificities have evolved within this clade.
Probab=99.07 E-value=1.4e-09 Score=117.99 Aligned_cols=125 Identities=22% Similarity=0.257 Sum_probs=94.2
Q ss_pred HHHHHHcCCCCCCCCHHHHHHHHHHHHHHHhhccccCCcceEEEEeeeccCCCcccccccccCccccccccceEEEEEcC
Q 005255 92 HVKALTQLGPHAVGSDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYSDLNHIVLRILP 171 (706)
Q Consensus 92 ~L~~L~~igpR~~gS~~~~~a~~yL~~~l~~ig~~~~~~~~vevd~f~~~~g~~~~~g~~~~~~~~~y~~~~NVi~~i~g 171 (706)
.+++|.++. -+. ..++++.+||.++|+++|. +++.+ ...|+++.. +
T Consensus 2 ~l~~lv~i~-s~s--~~e~~~~~~l~~~l~~~g~------~~~~~------------------------~~~~~~~~~-~ 47 (336)
T TIGR01902 2 LLKDLLEIY-SPS--GKEANAAKFLEEISKDLGL------KLIID------------------------DAGNFILGK-G 47 (336)
T ss_pred hHHHHhcCC-CCC--cchHHHHHHHHHHHHHcCC------EEEEC------------------------CCCcEEEEe-C
Confidence 467787763 333 3456899999999999983 33221 124777754 2
Q ss_pred CCCCCCCCCeEEEeecccccCC------------CCCCCCChhHHHHHHHHHHHHHhcCCCCCCcEEEEEeCCCCCCCcC
Q 005255 172 KYASEAGENAILVSSHIDTVSA------------GEGAGDCSSCVAVMLELARVMSQWAHEFKNAVIFLFNTGEEEGLNG 239 (706)
Q Consensus 172 ~~~~~~~~~~Vll~aH~DSv~~------------~pGA~Dd~sgva~~LE~ar~L~~~~~~p~~~I~flf~~~EE~gl~G 239 (706)
. +.+.|++++|+|+||. ++|+.|+++|+|+++++++.|.+. ..+|.|+++.+||.|..|
T Consensus 48 ~-----~~~~i~~~~H~D~vp~~~~~~~~~g~i~GrG~~D~Kg~~aa~l~a~~~l~~~----~~~i~~~~~~dEE~g~~G 118 (336)
T TIGR01902 48 D-----GHKKILLAGHVDTVPGYIPVKIEGGLLYGRGAVDAKGPLIAMIFATWLLNEK----GIKVIVSGLVDEESSSKG 118 (336)
T ss_pred C-----CCceEEEEccccccCCCcccEEeCCEEEEecccCCCcHHHHHHHHHHHHHhC----CCcEEEEEEeCcccCCcc
Confidence 1 3478999999999973 489999999999999999999764 358999999999999999
Q ss_pred hHHHHhcCCccCCceEEEEeecCc
Q 005255 240 AHSFVTQHPWSTTIRVAVDLEAMG 263 (706)
Q Consensus 240 S~~f~~~~~~~~~v~a~iNLD~~G 263 (706)
++.+++++.. .+++..|..+
T Consensus 119 ~~~~~~~~~~----~~~ii~ept~ 138 (336)
T TIGR01902 119 AREVIDKNYP----FYVIVGEPSG 138 (336)
T ss_pred HHHHHhhcCC----CEEEEecCCC
Confidence 9999965432 2667777654
No 65
>TIGR01900 dapE-gram_pos succinyl-diaminopimelate desuccinylase. This enzyme is involved in the biosynthesis of lysine, and is related to the enzyme acetylornithine deacetylase and other amidases and peptidases found within pfam01546.
Probab=99.06 E-value=1.9e-09 Score=118.89 Aligned_cols=135 Identities=24% Similarity=0.231 Sum_probs=97.5
Q ss_pred HHHHHcCCCCCCCCHHHHHHHHHHHHHHHhhccccCCcceEEEEeeeccCCCcccccccccCccccccccceEEEEEcCC
Q 005255 93 VKALTQLGPHAVGSDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYSDLNHIVLRILPK 172 (706)
Q Consensus 93 L~~L~~igpR~~gS~~~~~a~~yL~~~l~~ig~~~~~~~~vevd~f~~~~g~~~~~g~~~~~~~~~y~~~~NVi~~i~g~ 172 (706)
|++|.++.. + |.++.++.+||.++|++++.. .++++. ...||++++.+.
T Consensus 2 l~~Lv~ipS-~--s~~e~~~~~~i~~~l~~~g~~-----~~~~~~-----------------------~~~nvva~~~~~ 50 (373)
T TIGR01900 2 LQQIMDIFS-P--SDHEGPIADEIEAALNNLELE-----GLEVFR-----------------------FGDNVLARTDFG 50 (373)
T ss_pred hHHHhCCCC-C--CchHHHHHHHHHHHHhhcccc-----CceEEE-----------------------ECCEEEEecCCC
Confidence 567877633 2 345568999999999988631 123321 013899987432
Q ss_pred CCCCCCCCeEEEeecccccCC-------------------------------CCCCCCChhHHHHHHHHHHHHHh--cCC
Q 005255 173 YASEAGENAILVSSHIDTVSA-------------------------------GEGAGDCSSCVAVMLELARVMSQ--WAH 219 (706)
Q Consensus 173 ~~~~~~~~~Vll~aH~DSv~~-------------------------------~pGA~Dd~sgva~~LE~ar~L~~--~~~ 219 (706)
+.+.|++++|+|+||. ++|+.|+++|+|++|++++.|.+ .+.
T Consensus 51 -----~~~~l~l~gH~DtVp~~~~~~~~W~~~p~~~~~~~~~~~~~~~g~lyGRGa~DmKgg~aa~l~a~~~l~~~~~~~ 125 (373)
T TIGR01900 51 -----KASRVILAGHIDTVPIADNFPPKWLEPGDSLIREEIAHAHPEDGILWGCGATDMKAGDAVMLHLAATLDGRAPET 125 (373)
T ss_pred -----CCCeEEEeCccccccCCCCChhhhccCcccccccccccccccCCEEEecCchhhhHHHHHHHHHHHHHhhhcccc
Confidence 2467999999999952 37899999999999999999954 344
Q ss_pred CCCCcEEEEEeCCCCCCC--cChHHHHhcCCccCCceEEEEeecCc
Q 005255 220 EFKNAVIFLFNTGEEEGL--NGAHSFVTQHPWSTTIRVAVDLEAMG 263 (706)
Q Consensus 220 ~p~~~I~flf~~~EE~gl--~GS~~f~~~~~~~~~v~a~iNLD~~G 263 (706)
.++.+|.|+|.++||.|. .|++.++++++...+..++|..|..+
T Consensus 126 ~~~~~i~~~~~~dEE~~~~~~G~~~~~~~~~~~~~~d~~iv~Ept~ 171 (373)
T TIGR01900 126 ELKHDLTLIAYDCEEVAAEKNGLGHIRDAHPDWLAADFAIIGEPTG 171 (373)
T ss_pred CCCCCEEEEEEecccccCCCCCHHHHHHhCcccccCCEEEEECCCC
Confidence 678899999999999863 59999987654333456777776543
No 66
>PRK09961 exoaminopeptidase; Provisional
Probab=99.05 E-value=1.1e-08 Score=111.81 Aligned_cols=219 Identities=16% Similarity=0.197 Sum_probs=145.0
Q ss_pred HHHHHHHcCCCCCCCCHHHHHHHHHHHHHHHhhccccCCcceEEEEeeeccCCCcccccccccCccccccccceEEEEEc
Q 005255 91 KHVKALTQLGPHAVGSDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYSDLNHIVLRIL 170 (706)
Q Consensus 91 ~~L~~L~~igpR~~gS~~~~~a~~yL~~~l~~ig~~~~~~~~vevd~f~~~~g~~~~~g~~~~~~~~~y~~~~NVi~~i~ 170 (706)
+.|++|+++ +-+.| .++++++++.+++++++. ++++| +..|+++++.
T Consensus 4 ~~L~~L~~~-~s~sG--~E~~v~~~i~~~l~~~~~------~v~~D------------------------~~Gnvi~~~~ 50 (344)
T PRK09961 4 SLLKALSEA-DAIAS--SEQEVRQILLEEADRLQK------EVRFD------------------------GLGSVLIRLN 50 (344)
T ss_pred HHHHHHHhC-CCCCC--ChHHHHHHHHHHHHhhCC------EEEEC------------------------CCCCEEEEEc
Confidence 458888885 44444 456899999999999973 34443 4578888876
Q ss_pred CCCCCCCCCCeEEEeecccccCCC--------------------------------------------------------
Q 005255 171 PKYASEAGENAILVSSHIDTVSAG-------------------------------------------------------- 194 (706)
Q Consensus 171 g~~~~~~~~~~Vll~aH~DSv~~~-------------------------------------------------------- 194 (706)
|+ +.+.|++.||+|+++.-
T Consensus 51 g~-----~~~~v~l~aHmDevg~~V~~I~~~G~l~~~~vGG~~~~~~~~~~v~i~~~~g~~i~Gvi~~~~~~~~~~~l~i 125 (344)
T PRK09961 51 ES-----TGPKVMICAHMDEVGFMVRSISREGAIDVLPVGNVRMAARQLQPVRITTREECKIPGLLNGDRQGNDVSAMRV 125 (344)
T ss_pred CC-----CCCEEEEEeccceeceEEEEECCCceEEEEeCCCccccccCCCEEEEEeCCCCEeeEEEChhhcCCCHHHEEE
Confidence 53 23479999999977520
Q ss_pred ------------------------------------CCCCCChhHHHHHHHHHHHHHhcCCCCCCcEEEEEeCCCCCCCc
Q 005255 195 ------------------------------------EGAGDCSSCVAVMLELARVMSQWAHEFKNAVIFLFNTGEEEGLN 238 (706)
Q Consensus 195 ------------------------------------pGA~Dd~sgva~~LE~ar~L~~~~~~p~~~I~flf~~~EE~gl~ 238 (706)
.-+-||..||++++|++|.+.+. +++.+++|+|+..||.|+.
T Consensus 126 DiG~~s~ee~~~~GI~~Gd~v~~~~~~~~~~~~~i~gkalDnR~g~~~lle~l~~l~~~--~~~~~v~~~~tvqEEvG~r 203 (344)
T PRK09961 126 DIGARSYDEVMQAGIRPGDRVTFDTTFQVLPHQRVMGKAFDDRLGCYLLVTLLRELHDA--ELPAEVWLVASSSEEVGLR 203 (344)
T ss_pred EcCCCCHHHHHhcCCCCCCEEEEcceeEEecCCEEEEeechhhHhHHHHHHHHHHhhhc--CCCceEEEEEEcccccchH
Confidence 23789999999999999999754 5689999999999999999
Q ss_pred ChHHHHhcCCccCCceEEEEeecCcCC---------------CCccccc-cCC--CHHHHHHHHHHccCCCCcccccccc
Q 005255 239 GAHSFVTQHPWSTTIRVAVDLEAMGIG---------------GRSALFQ-AGP--NLWAVENFAAVAKYPSGQIIGQDLF 300 (706)
Q Consensus 239 GS~~f~~~~~~~~~v~a~iNLD~~G~g---------------g~~~lfq-~g~--~~~li~~y~~~a~~p~~~~l~~e~f 300 (706)
||+.-+... +...+|.+|.+-.. |+.+-+. .++ ++.+.+...+.++.. +...-.+.+
T Consensus 204 Ga~~aa~~i----~pd~~I~vDv~~~~d~~~~~~~~~~~lg~Gp~i~~~D~~~i~~~~l~~~l~~~A~~~-~Ip~Q~~~~ 278 (344)
T PRK09961 204 GGQTATRAV----SPDVAIVLDTACWAKNFDYGAANHRQIGNGPMLVLSDKSLIAPPKLTAWIETVAAEI-GIPLQADMF 278 (344)
T ss_pred HHHHHHhcc----CCCEEEEEeccCCCCCCCCCCCcccccCCCceEEEccCCcCCCHHHHHHHHHHHHHc-CCCcEEEec
Confidence 999877432 23457777765332 2222111 122 566666666554321 111111111
Q ss_pred cCCCCCCCCchHHHhhc-CCCeEEEEEeecCCCCCCCcCCCcCCCCHHHHHHHHHHHHHHHHHH
Q 005255 301 ASGVFETATDFQVYTEV-AGLSGLDFAYTDKSAVYHTKNDRLDLLKPGSLQHLGENMLDFLLQT 363 (706)
Q Consensus 301 ~~g~ips~TD~~~F~~~-~GiPgld~a~~~~~~~YHT~~Dt~d~id~~sLq~~g~~~l~ll~~l 363 (706)
...+||-..|... .|+|.+.+..- .. +-||+. |.++.+.+.++.+.+.+++..+
T Consensus 279 ----~ggGTDa~~~~~~~~Giptv~ig~p-~r-y~Hs~~---E~v~~~D~~~~~~Ll~~~i~~l 333 (344)
T PRK09961 279 ----SNGGTDGGAVHLTGTGVPTVVMGPA-TR-HGHCAA---SIADCRDILQMIQLLSALIQRL 333 (344)
T ss_pred ----CCCcchHHHHHHhCCCCCEEEechh-hh-cccChh---heEEHHHHHHHHHHHHHHHHHc
Confidence 1236888877542 68999988542 22 458854 6677888888888777777554
No 67
>TIGR03107 glu_aminopep glutamyl aminopeptidase. This model represents the M42.001 clade within MEROPS family M42. M42 includes glutamyl aminopeptidase as in the present model, deblocking aminopeptidases as from Pyrococcus horikoshii and related species, and endo-1,4-beta-glucanase (cellulase M) as from Clostridium thermocellum. The current family includes
Probab=99.05 E-value=1.2e-08 Score=111.61 Aligned_cols=149 Identities=20% Similarity=0.179 Sum_probs=98.7
Q ss_pred CCCChhHHHHHHHHHHHHHhcCCCCCCcEEEEEeCCCCCCCcChHHHHhcCCccCCceEEEEeecCcCC-----------
Q 005255 197 AGDCSSCVAVMLELARVMSQWAHEFKNAVIFLFNTGEEEGLNGAHSFVTQHPWSTTIRVAVDLEAMGIG----------- 265 (706)
Q Consensus 197 A~Dd~sgva~~LE~ar~L~~~~~~p~~~I~flf~~~EE~gl~GS~~f~~~~~~~~~v~a~iNLD~~G~g----------- 265 (706)
|-||..||++++|++|.+.+. +++.+++++|+.-||.|+.||+.-+.+. +...+|.+|..-.+
T Consensus 176 alDdR~g~a~l~e~l~~l~~~--~~~~~l~~~~tvqEEvG~rGA~~aa~~i----~pD~aI~vDv~~~~d~~~~~~~~lg 249 (350)
T TIGR03107 176 AWDNRYGVLMILELLESLKDQ--ELPNTLIAGANVQEEVGLRGAHVSTTKF----NPDIFFAVDCSPAGDIYGDQGGKLG 249 (350)
T ss_pred ccccHHHHHHHHHHHHHhhhc--CCCceEEEEEEChhhcCchhhhhHHhhC----CCCEEEEEecCCcCCCCCCCccccC
Confidence 789999999999999999764 5778999999999999999999765332 22367777754321
Q ss_pred -CCccccc-cCC--CHHHHHHHHHHccCCCCcccccccccCCCCCCCCchH--HHhhcCCCeEEEEEeecCCCCCCCcCC
Q 005255 266 -GRSALFQ-AGP--NLWAVENFAAVAKYPSGQIIGQDLFASGVFETATDFQ--VYTEVAGLSGLDFAYTDKSAVYHTKND 339 (706)
Q Consensus 266 -g~~~lfq-~g~--~~~li~~y~~~a~~p~~~~l~~e~f~~g~ips~TD~~--~F~~~~GiPgld~a~~~~~~~YHT~~D 339 (706)
|+.+.+. .++ ++.+.+...+.|+. .+-. .|-.. + ..+||-. .+.. .|+|.+.+.- +. .+-||+.
T Consensus 250 ~Gp~i~~~D~~~i~~~~l~~~l~~~A~~-~~I~-~Q~~~-~---~gGtDa~~~~~~~-~Gvpt~~i~i-p~-Ry~Hs~~- 319 (350)
T TIGR03107 250 EGTLLRFFDPGHIMLPRMKDFLLTTAEE-AGIK-YQYYV-A---KGGTDAGAAHLKN-SGVPSTTIGV-CA-RYIHSHQ- 319 (350)
T ss_pred CCceEEEecCCCCCCHHHHHHHHHHHHH-cCCC-cEEec-C---CCCchHHHHHHhC-CCCcEEEEcc-Cc-ccccChh-
Confidence 3333222 233 67777766665432 1111 12111 1 1356665 5555 7999988753 22 2458864
Q ss_pred CcCCCCHHHHHHHHHHHHHHHHHH
Q 005255 340 RLDLLKPGSLQHLGENMLDFLLQT 363 (706)
Q Consensus 340 t~d~id~~sLq~~g~~~l~ll~~l 363 (706)
+.++.+.++++.+.+.+++..+
T Consensus 320 --e~i~~~D~~~~~~Ll~~~i~~l 341 (350)
T TIGR03107 320 --TLYSIDDFLAAQAFLQAIVKKL 341 (350)
T ss_pred --heeeHHHHHHHHHHHHHHHHhc
Confidence 5568888999888888887764
No 68
>TIGR01246 dapE_proteo succinyl-diaminopimelate desuccinylase, proteobacterial clade. This model describes a proteobacterial subset of succinyl-diaminopimelate desuccinylases. An experimentally confirmed Gram-positive lineage succinyl-diaminopimelate desuccinylase has been described for Corynebacterium glutamicum, and a neighbor-joining tree shows the seed members, SP:Q59284, and putative archaeal members such as TrEMBL:O58003 in a single clade. However, the archaeal members differ substantially, share a number of motifs with acetylornithine deacetylases rather than succinyl-diaminopimelate desuccinylases, and are not taken as trusted examples of succinyl-diaminopimelate desuccinylases. This model is limited to proteobacterial members for this reason.
Probab=99.04 E-value=2.4e-09 Score=117.49 Aligned_cols=136 Identities=18% Similarity=0.194 Sum_probs=98.5
Q ss_pred HHHHHHHHcCCCCCCCCHHHHHHHHHHHHHHHhhccccCCcceEEEEeeeccCCCcccccccccCccccccccceEEEEE
Q 005255 90 MKHVKALTQLGPHAVGSDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYSDLNHIVLRI 169 (706)
Q Consensus 90 ~~~L~~L~~igpR~~gS~~~~~a~~yL~~~l~~ig~~~~~~~~vevd~f~~~~g~~~~~g~~~~~~~~~y~~~~NVi~~i 169 (706)
.+.+++|.++. ..|.++.++++||.++|+++|. ++++.. . .+..|++++.
T Consensus 2 ~~~l~~lv~ip---s~s~~e~~~~~~i~~~l~~~G~------~~~~~~--~-------------------~~~~~~~~~~ 51 (370)
T TIGR01246 2 TELAKELISRP---SVTPNDAGCQDIIAERLEKLGF------EIEWMH--F-------------------GDTKNLWATR 51 (370)
T ss_pred hHHHHHHhcCC---CCCcchHHHHHHHHHHHHHCCC------EEEEEe--c-------------------CCCceEEEEe
Confidence 35677888763 2344567899999999999983 343321 0 0236889875
Q ss_pred cCCCCCCCCCCeEEEeecccccCC---------------------CCCCCCChhHHHHHHHHHHHHHhcCCCCCCcEEEE
Q 005255 170 LPKYASEAGENAILVSSHIDTVSA---------------------GEGAGDCSSCVAVMLELARVMSQWAHEFKNAVIFL 228 (706)
Q Consensus 170 ~g~~~~~~~~~~Vll~aH~DSv~~---------------------~pGA~Dd~sgva~~LE~ar~L~~~~~~p~~~I~fl 228 (706)
|. ..+.|++.+|+|+||. ++|+.|++.|+++++++++.+.+.+.+++++|.|+
T Consensus 52 -g~-----~~~~i~~~~H~DtVp~~~~~~W~~~p~~~~~~dg~~yGrG~~D~Kgg~a~~l~a~~~l~~~~~~~~~~v~~~ 125 (370)
T TIGR01246 52 -GT-----GEPVLAFAGHTDVVPAGPEEQWSSPPFEPVERDGKLYGRGAADMKGSLAAFIVAAERFVKKNPDHKGSISLL 125 (370)
T ss_pred -cC-----CCcEEEEEccccccCCCCccccccCCCCcEEECCEEEecccccchHHHHHHHHHHHHHHHhcCCCCCcEEEE
Confidence 32 3468999999999975 27889999999999999999988776778899999
Q ss_pred EeCCCCCCC-cChHHHHhcCCc-cCCceEEEEeec
Q 005255 229 FNTGEEEGL-NGAHSFVTQHPW-STTIRVAVDLEA 261 (706)
Q Consensus 229 f~~~EE~gl-~GS~~f~~~~~~-~~~v~a~iNLD~ 261 (706)
|..+||.+. .|++.+.+.... ......++..|.
T Consensus 126 ~~~dEE~~~~~G~~~~~~~~~~~~~~~d~~i~~ep 160 (370)
T TIGR01246 126 ITSDEEGTAIDGTKKVVETLMARDELIDYCIVGEP 160 (370)
T ss_pred EEeccccCCCcCHHHHHHHHHhcCCCCCEEEEcCC
Confidence 999999865 699988743211 123455555453
No 69
>KOG2526 consensus Predicted aminopeptidases - M20/M25/M40 family [Amino acid transport and metabolism]
Probab=99.02 E-value=9.7e-09 Score=110.86 Aligned_cols=197 Identities=16% Similarity=0.239 Sum_probs=132.5
Q ss_pred ccceEEEEEc-CCC--CCCCCCCeEEEeecccccCC----CCCCCCChhHHHHHHHHHHHHHhc----CCCCCCcEEEEE
Q 005255 161 DLNHIVLRIL-PKY--ASEAGENAILVSSHIDTVSA----GEGAGDCSSCVAVMLELARVMSQW----AHEFKNAVIFLF 229 (706)
Q Consensus 161 ~~~NVi~~i~-g~~--~~~~~~~~Vll~aH~DSv~~----~pGA~Dd~sgva~~LE~ar~L~~~----~~~p~~~I~flf 229 (706)
...||.+++. |-+ ++.+..|.|++.||||+.+. ++||+-||+|++++||++|.+++- ...+++++.|+.
T Consensus 192 ki~nI~G~L~~glra~~dg~~lPtIaivA~ydtfgaap~lsvgADSNGSGvvaLLelarlfSkly~ypsTrakYnLlF~l 271 (555)
T KOG2526|consen 192 KILNIVGRLSSGLRAEGDGSALPTIAIVAHYDTFGAAPGLSVGADSNGSGVVALLELARLFSKLYDYPSTRAKYNLLFIL 271 (555)
T ss_pred ccceEEeecccccccccccccCCeEEEEEeccccccCCCCCCCCCCCCccHHHHHHHHHHHHHHhcCcccccceeEEEEE
Confidence 6799999998 321 11345689999999999754 689999999999999999999883 245789999999
Q ss_pred eCCCCCCCcChHHHHhcCC--ccCCceEEEEeecCcCCCCccccccC-C--CHHHHHH----HHHHccCCCCcccccccc
Q 005255 230 NTGEEEGLNGAHSFVTQHP--WSTTIRVAVDLEAMGIGGRSALFQAG-P--NLWAVEN----FAAVAKYPSGQIIGQDLF 300 (706)
Q Consensus 230 ~~~EE~gl~GS~~f~~~~~--~~~~v~a~iNLD~~G~gg~~~lfq~g-~--~~~li~~----y~~~a~~p~~~~l~~e~f 300 (706)
++|.-...+|++.|.+-.. .++++..+|++|++|.+..+.....+ | +...+.. +...+++-.-....
T Consensus 272 t~aG~lNyqGTkkWLe~dd~~lq~nVdfaiCLdtig~~~s~l~mHvsKpP~dnt~i~qffr~l~svAek~~~~v~~---- 347 (555)
T KOG2526|consen 272 TAAGKLNYQGTKKWLEFDDADLQKNVDFAICLDTIGRKTSGLFMHVSKPPSDNTVIAQFFRRLNSVAEKKNIEVVT---- 347 (555)
T ss_pred ccCccccccchhhhhhcchHHHHhcccEEEEhhhhccccCceEEEccCCCCcchHHHHHHHHhhhhchhcceEEEE----
Confidence 9999999999999996332 24799999999999997444433322 2 2233333 33333322100000
Q ss_pred cCCCCCCCC-----chHHHhhcCCCeEEEEEeecCC--CCCCCcC-CCcCCCCHHHHHHHHHHHHHHHHH
Q 005255 301 ASGVFETAT-----DFQVYTEVAGLSGLDFAYTDKS--AVYHTKN-DRLDLLKPGSLQHLGENMLDFLLQ 362 (706)
Q Consensus 301 ~~g~ips~T-----D~~~F~~~~GiPgld~a~~~~~--~~YHT~~-Dt~d~id~~sLq~~g~~~l~ll~~ 362 (706)
....|.-.+ .|.-|.- ..+|+..+.....+ +.-.+.. |+...+|.++|-+..+.+.+.+..
T Consensus 348 khkkInla~s~lAWEHErFsi-kR~pAfTLS~l~Sprdp~rnsi~~d~rsrldedtLi~ntRlIaEAla~ 416 (555)
T KOG2526|consen 348 KHKKINLASSRLAWEHERFSI-KRMPAFTLSTLPSPRDPARNSILLDLRSRLDEDTLIDNTRLIAEALAG 416 (555)
T ss_pred EeeeEeeccchhhhhhhhhhh-hcccceeeccCCCCcchhhccccccchhhhhhhhhhhhhhHHHHHHHH
Confidence 001111112 3555554 67999998876433 2345555 999999999998766655554443
No 70
>TIGR01887 dipeptidaselike dipeptidase, putative. This model represents a clade of probable zinc dipeptidases, closely related to the characterized non-specific dipeptidase, PepV. Many enzymes in this clade have been given names including the terms "Xaa-His" and "carnosinase" due to the early mis-characterization of the Lactobacillus delbrueckii PepV enzyme. These names are likely too specific.
Probab=99.00 E-value=3.7e-09 Score=119.45 Aligned_cols=124 Identities=19% Similarity=0.270 Sum_probs=93.2
Q ss_pred HHHHHHHHHHHcCCCCC----CC-----CHHHHHHHHHHHHHHHhhccccCCcceEEEEeeeccCCCcccccccccCccc
Q 005255 87 LEAMKHVKALTQLGPHA----VG-----SDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTL 157 (706)
Q Consensus 87 erA~~~L~~L~~igpR~----~g-----S~~~~~a~~yL~~~l~~ig~~~~~~~~vevd~f~~~~g~~~~~g~~~~~~~~ 157 (706)
+...+.|++|.++.+-. .+ .++..++.+|+.++++++|. +++.
T Consensus 2 ~~~i~ll~~Lv~ipS~s~~~~p~~~~~~~~~~~~~~~~l~~~~~~~g~------~~~~---------------------- 53 (447)
T TIGR01887 2 DEILEDLKELIRIDSVEDLEEAKEGAPFGEGPKKALDKFLELAKRDGF------TTEN---------------------- 53 (447)
T ss_pred hHHHHHHHHhcCcCcCCCCCCCCCCCCcchhHHHHHHHHHHHHHHcCc------eEEE----------------------
Confidence 35778888998874311 11 23346899999999999883 3321
Q ss_pred cccccceEEEEEcCCCCCCCCCCeEEEeecccccCC-------------------CCCCCCChhHHHHHHHHHHHHHhcC
Q 005255 158 IYSDLNHIVLRILPKYASEAGENAILVSSHIDTVSA-------------------GEGAGDCSSCVAVMLELARVMSQWA 218 (706)
Q Consensus 158 ~y~~~~NVi~~i~g~~~~~~~~~~Vll~aH~DSv~~-------------------~pGA~Dd~sgva~~LE~ar~L~~~~ 218 (706)
..|++++.+.+ ...+.|++++|+|+||. ++|+.||+.|+++++++++.|.+.+
T Consensus 54 ----~~~~~~~~~~~----~~~~~l~l~gH~D~Vp~~~~W~~~Pf~~~~~~g~lyGRGa~D~KG~laa~l~a~~~l~~~~ 125 (447)
T TIGR01887 54 ----VDNYAGYAEYG----QGEEYLGILGHLDVVPAGDGWTSPPFEAEIKDGRIYGRGTLDDKGPTIAALYAMKILKELG 125 (447)
T ss_pred ----ecCceEEEEeC----CCCCeEEEEeecCCCCCCCCCcCCCCceEEECCEEEECCcccCcHHHHHHHHHHHHHHHcC
Confidence 11233222211 12357999999999974 3899999999999999999999887
Q ss_pred CCCCCcEEEEEeCCCCCCCcChHHHHhc
Q 005255 219 HEFKNAVIFLFNTGEEEGLNGAHSFVTQ 246 (706)
Q Consensus 219 ~~p~~~I~flf~~~EE~gl~GS~~f~~~ 246 (706)
.+++++|.|+|+.+||.|+.|++.++++
T Consensus 126 ~~~~~~i~~~~~~dEE~g~~g~~~~l~~ 153 (447)
T TIGR01887 126 LKLKKKIRFIFGTDEETGWACIDYYFEH 153 (447)
T ss_pred CCCCCcEEEEEECCcccCcHhHHHHHHh
Confidence 7788999999999999999999999854
No 71
>TIGR01891 amidohydrolases amidohydrolase. This model represents a subfamily of amidohydrolases which are a subset of those sequences detected by pfam01546. Included within this group are hydrolases of hippurate (N-benzylglycine), indoleacetic acid (IAA) N-conjugates of amino acids, N-acetyl-L-amino acids and aminobenzoylglutamate. These hydrolases are of the carboxypeptidase-type, most likely utilizing a zinc ion in the active site.
Probab=98.94 E-value=1.3e-08 Score=111.73 Aligned_cols=132 Identities=15% Similarity=0.205 Sum_probs=97.5
Q ss_pred HHHHHHHcCCCCCCCCHHHHHHHHHHHHHHHhhccccCCcceEEEEeeeccCCCcccccccccCccccccccceEEEEEc
Q 005255 91 KHVKALTQLGPHAVGSDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYSDLNHIVLRIL 170 (706)
Q Consensus 91 ~~L~~L~~igpR~~gS~~~~~a~~yL~~~l~~ig~~~~~~~~vevd~f~~~~g~~~~~g~~~~~~~~~y~~~~NVi~~i~ 170 (706)
+.+++|.++ |.+.| .+.++.+||.++|+++|. +++.+ . ....|+++++.
T Consensus 3 ~~~~~L~~i-ps~s~--~E~~~a~~l~~~l~~~g~------~~~~~---~-------------------~~~~~vva~~~ 51 (363)
T TIGR01891 3 DIRRHLHEH-PELSF--EEFKTSSLIAEALESLGI------EVRRG---V-------------------GGATGVVATIG 51 (363)
T ss_pred HHHHHHhcC-CCCCC--chHHHHHHHHHHHHHcCC------ceEec---C-------------------CCCcEEEEEEe
Confidence 567888887 55544 457899999999999984 33321 0 02378999986
Q ss_pred CCCCCCCCCCeEEEeecccccCCC-----------------CCCCCChhHHHHHHHHHHHHHhcCCCCCCcEEEEEeCCC
Q 005255 171 PKYASEAGENAILVSSHIDTVSAG-----------------EGAGDCSSCVAVMLELARVMSQWAHEFKNAVIFLFNTGE 233 (706)
Q Consensus 171 g~~~~~~~~~~Vll~aH~DSv~~~-----------------pGA~Dd~sgva~~LE~ar~L~~~~~~p~~~I~flf~~~E 233 (706)
++ .+.+.|++++|+|+||.. +|+ ++++|+++.+++.|.+.+.+++++|.|+|+.+|
T Consensus 52 ~~----~~~~~i~l~gH~DtVp~~~~~~~pf~~~~~g~l~g~G~---~~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dE 124 (363)
T TIGR01891 52 GG----KPGPVVALRADMDALPIQEQTDLPYKSTNPGVMHACGH---DLHTAILLGTAKLLKKLADLLEGTVRLIFQPAE 124 (363)
T ss_pred CC----CCCCEEEEEeccCCCCcccccCCCcccCCCCceecCcC---HHHHHHHHHHHHHHHhchhhCCceEEEEEeecC
Confidence 53 134789999999999842 233 367899999999998765567889999999999
Q ss_pred CCCCcChHHHHhcCCccCCceEEEEeecC
Q 005255 234 EEGLNGAHSFVTQHPWSTTIRVAVDLEAM 262 (706)
Q Consensus 234 E~gl~GS~~f~~~~~~~~~v~a~iNLD~~ 262 (706)
|.+ .|++.++++. +.+++..+++.|..
T Consensus 125 E~~-~G~~~~~~~~-~~~~~d~~i~~e~~ 151 (363)
T TIGR01891 125 EGG-GGATKMIEDG-VLDDVDAILGLHPD 151 (363)
T ss_pred cCc-chHHHHHHCC-CCCCcCEEEEECCC
Confidence 986 7999998543 33456778887764
No 72
>TIGR03320 ygeY M20/DapE family protein YgeY. Members of this protein family, including the YgeY protein of Escherichia coli, typically are found in extended genomic regions associated with purine catabolism. Homologs include peptidases and deacylases of the M20/M25 /M40 and DapE/ArgE families. The function is unknown.
Probab=98.93 E-value=1.4e-08 Score=112.66 Aligned_cols=121 Identities=19% Similarity=0.252 Sum_probs=91.2
Q ss_pred HHHHHHHHHHHcCCCCCCCCHHHHHHHHHHHHHHHhhccccCCcceEEEEeeeccCCCcccccccccCccccccccceEE
Q 005255 87 LEAMKHVKALTQLGPHAVGSDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYSDLNHIV 166 (706)
Q Consensus 87 erA~~~L~~L~~igpR~~gS~~~~~a~~yL~~~l~~ig~~~~~~~~vevd~f~~~~g~~~~~g~~~~~~~~~y~~~~NVi 166 (706)
+++.+.+++|.++.. + |..+.++.+||.++|+++|.+ .++++ ...|++
T Consensus 13 ~~~~~~~~~lv~i~s-~--s~~e~~~~~~l~~~l~~~G~~-----~~~~~------------------------~~~n~~ 60 (395)
T TIGR03320 13 GDMIRFLRDLVAIPS-E--SGDEKRVAERIKEEMEKLGFD-----KVEID------------------------PMGNVL 60 (395)
T ss_pred HHHHHHHHHHHcCCC-C--CCchHHHHHHHHHHHHHhCCc-----EEEEC------------------------CCCCEE
Confidence 678888999998632 3 334568899999999999831 11211 125788
Q ss_pred EEEcCCCCCCCCCCeEEEeecccccCC---------------------CCCCCCChhHHHHHHHHHHHHHhcCCCCCCcE
Q 005255 167 LRILPKYASEAGENAILVSSHIDTVSA---------------------GEGAGDCSSCVAVMLELARVMSQWAHEFKNAV 225 (706)
Q Consensus 167 ~~i~g~~~~~~~~~~Vll~aH~DSv~~---------------------~pGA~Dd~sgva~~LE~ar~L~~~~~~p~~~I 225 (706)
+++ |+ ..+.|++.+|+|+||. ++|+.|+++|+|++|.+++.|.+.+..++.++
T Consensus 61 ~~~-g~-----~~~~l~l~~H~DtVp~~~~~~w~~~Pf~~~~~~g~lyGrG~~D~Kg~~aa~l~A~~~l~~~g~~~~~~i 134 (395)
T TIGR03320 61 GYI-GH-----GPKLIAMDAHIDTVGIGDSKQWQFDPYEGYEDEEIIYGRGASDQEGGIASMVYAGKIIKDLGLLDDYTL 134 (395)
T ss_pred EEe-CC-----CCcEEEEEecccccCCCCccccccCCCceEEECCEEEecCccCccchHHHHHHHHHHHHHcCCCCCceE
Confidence 887 32 2367999999999974 38999999999999999999998776677899
Q ss_pred EEEEeCCCCCC-CcChHHHHh
Q 005255 226 IFLFNTGEEEG-LNGAHSFVT 245 (706)
Q Consensus 226 ~flf~~~EE~g-l~GS~~f~~ 245 (706)
.|.+..+||.+ ..|++.+.+
T Consensus 135 ~~~~~~dEE~~~g~~~~~~~~ 155 (395)
T TIGR03320 135 LVTGTVQEEDCDGLCWQYIIE 155 (395)
T ss_pred EEEecccccccCchHHHHHHH
Confidence 99999999964 234455553
No 73
>PRK08737 acetylornithine deacetylase; Provisional
Probab=98.92 E-value=1.1e-08 Score=112.47 Aligned_cols=131 Identities=21% Similarity=0.226 Sum_probs=93.3
Q ss_pred HHHHHHHHHHHHcCCCCC-CCCHHHHHHHHHHHHHHHhhccccCCcceEEEEeeeccCCCcccccccccCccccccccce
Q 005255 86 ELEAMKHVKALTQLGPHA-VGSDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYSDLNH 164 (706)
Q Consensus 86 ~erA~~~L~~L~~igpR~-~gS~~~~~a~~yL~~~l~~ig~~~~~~~~vevd~f~~~~g~~~~~g~~~~~~~~~y~~~~N 164 (706)
.+++.+.|++|.+|.... .++.++.++.+|+.++++ | ++++++. . + ....|
T Consensus 5 ~~~~~~~l~~Lv~i~s~~~~~~~~e~~~~~~l~~~l~--g------~~~~~~~--~--~----------------~~~~n 56 (364)
T PRK08737 5 LESTLDHLQALVSFDTRNPPRAITTGGIFDYLRAQLP--G------FQVEVID--H--G----------------AGAVS 56 (364)
T ss_pred HHHHHHHHHHHhCCCCcCCCCCCCcHHHHHHHHHHhC--C------CEEEEec--C--C----------------CCceE
Confidence 457889999999986532 223234688999999996 4 2344431 1 0 03468
Q ss_pred EEEEEcCCCCCCCCCCeEEEeecccccCC-------------------CCCCCCChhHHHHHHHHHHHHHhcCCCCCCcE
Q 005255 165 IVLRILPKYASEAGENAILVSSHIDTVSA-------------------GEGAGDCSSCVAVMLELARVMSQWAHEFKNAV 225 (706)
Q Consensus 165 Vi~~i~g~~~~~~~~~~Vll~aH~DSv~~-------------------~pGA~Dd~sgva~~LE~ar~L~~~~~~p~~~I 225 (706)
++++ .|+ +.|++++|+||||. ++|+.|+++|+|+++.+++. ++.+|
T Consensus 57 li~~-~g~-------~~lll~gH~DtVp~~~~w~~~Pf~~~~~~g~lyGrGa~DmKg~~aa~l~a~~~-------~~~~v 121 (364)
T PRK08737 57 LYAV-RGT-------PKYLFNVHLDTVPDSPHWSADPHVMRRTDDRVIGLGVCDIKGAAAALLAAANA-------GDGDA 121 (364)
T ss_pred EEEE-cCC-------CeEEEEeeeCCCCCCCCCCCCCCceEEECCEEEEECcccchHHHHHHHHHHHc-------cCCCE
Confidence 8885 231 46999999999984 27999999999999999873 35689
Q ss_pred EEEEeCCCCCCC-cChHHHHhcCCccCCceEEEEeecC
Q 005255 226 IFLFNTGEEEGL-NGAHSFVTQHPWSTTIRVAVDLEAM 262 (706)
Q Consensus 226 ~flf~~~EE~gl-~GS~~f~~~~~~~~~v~a~iNLD~~ 262 (706)
.|+|+.+||.|. .|++.++++.. +..++|..|..
T Consensus 122 ~~~~~~dEE~g~~~g~~~~~~~~~---~~~~~iv~Ept 156 (364)
T PRK08737 122 AFLFSSDEEANDPRCVAAFLARGI---PYEAVLVAEPT 156 (364)
T ss_pred EEEEEcccccCchhhHHHHHHhCC---CCCEEEEcCCC
Confidence 999999999987 68888886532 23445554443
No 74
>TIGR03526 selenium_YgeY putative selenium metabolism hydrolase. SelD, selenophosphate synthase, is the selenium donor protein for both selenocysteine and selenouridine biosynthesis systems, but it occurs also in a few prokaryotes that have neither of those pathways. The method of partial phylogenetic profiling, starting from such orphan-selD genomes, identifies this protein as one of those most strongly correlated to SelD occurrence. Its distribution is also well correlated with that of family TIGR03309, a putative accessory protein of labile selenium (non-selenocysteine) enzyme maturation. This family includes the uncharacterized YgeY of Escherichia coli, and belongs to a larger family of metalloenzymes in which some are known peptidases, others enzymes of different types.
Probab=98.92 E-value=1.9e-08 Score=111.61 Aligned_cols=122 Identities=19% Similarity=0.248 Sum_probs=92.2
Q ss_pred HHHHHHHHHHHcCCCCCCCCHHHHHHHHHHHHHHHhhccccCCcceEEEEeeeccCCCcccccccccCccccccccceEE
Q 005255 87 LEAMKHVKALTQLGPHAVGSDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYSDLNHIV 166 (706)
Q Consensus 87 erA~~~L~~L~~igpR~~gS~~~~~a~~yL~~~l~~ig~~~~~~~~vevd~f~~~~g~~~~~g~~~~~~~~~y~~~~NVi 166 (706)
+++.+.+++|.++. -+ |..+.++.+||.++++++|.+ .++.+ ...|++
T Consensus 13 ~~~~~~l~~Lv~ip-s~--s~~e~~~~~~l~~~l~~~g~~-----~~~~~------------------------~~~~v~ 60 (395)
T TIGR03526 13 GDMIRFLRDLVAIP-SE--SGDEGRVALRIKQEMEKLGFD-----KVEID------------------------PMGNVL 60 (395)
T ss_pred HHHHHHHHHHhcCC-CC--CCchHHHHHHHHHHHHHcCCc-----eEEEc------------------------CCCcEE
Confidence 57788899998863 23 334568899999999999831 11211 125888
Q ss_pred EEEcCCCCCCCCCCeEEEeecccccCC---------------------CCCCCCChhHHHHHHHHHHHHHhcCCCCCCcE
Q 005255 167 LRILPKYASEAGENAILVSSHIDTVSA---------------------GEGAGDCSSCVAVMLELARVMSQWAHEFKNAV 225 (706)
Q Consensus 167 ~~i~g~~~~~~~~~~Vll~aH~DSv~~---------------------~pGA~Dd~sgva~~LE~ar~L~~~~~~p~~~I 225 (706)
+++ |. ..+.|++.+|+|+||. ++|+.|++.|++++|.+++.|.+.+..++.++
T Consensus 61 ~~~-g~-----~~~~l~l~~H~DtVp~~~~~~W~~~Pf~~~~~~g~lyGrG~~D~Kg~~aa~l~a~~~l~~~~~~~~~~v 134 (395)
T TIGR03526 61 GYI-GH-----GPKLIAMDAHIDTVGIGDMDQWQFDPYEGYEDEEIIYGRGASDQEGGIASMVYAGKIIKDLGLLDDYTL 134 (395)
T ss_pred EEe-CC-----CCCEEEEEeeccccCCCCcccccCCCCceEEECCEEEecCccccchhHHHHHHHHHHHHHcCCCCCceE
Confidence 887 32 2357999999999984 38999999999999999999998776667899
Q ss_pred EEEEeCCCCC-CCcChHHHHhc
Q 005255 226 IFLFNTGEEE-GLNGAHSFVTQ 246 (706)
Q Consensus 226 ~flf~~~EE~-gl~GS~~f~~~ 246 (706)
.|++..+||. +..|++.++++
T Consensus 135 ~~~~~~dEE~~~g~~~~~~~~~ 156 (395)
T TIGR03526 135 LVTGTVQEEDCDGLCWQYIIEE 156 (395)
T ss_pred EEEEecccccCCcHhHHHHHhc
Confidence 9999999994 44566776643
No 75
>PRK09864 putative peptidase; Provisional
Probab=98.91 E-value=7.9e-08 Score=105.12 Aligned_cols=149 Identities=20% Similarity=0.178 Sum_probs=96.3
Q ss_pred CCCChhHHHHHHHHHHHHHhcCCCCCCcEEEEEeCCCCCCCcChHHHHhcCCccCCceEEEEeecCcC------------
Q 005255 197 AGDCSSCVAVMLELARVMSQWAHEFKNAVIFLFNTGEEEGLNGAHSFVTQHPWSTTIRVAVDLEAMGI------------ 264 (706)
Q Consensus 197 A~Dd~sgva~~LE~ar~L~~~~~~p~~~I~flf~~~EE~gl~GS~~f~~~~~~~~~v~a~iNLD~~G~------------ 264 (706)
|-||..||++++|++|.+.+ ++.+++|+|+.-||.|+.||+.-+.+.+ ...+|.+|..-+
T Consensus 173 alDnR~g~~~lle~l~~l~~----~~~~vy~v~TvQEEvGlrGA~~aa~~i~----PDiaIavDvt~~~d~p~~~~~~~~ 244 (356)
T PRK09864 173 ALDNRIGCAMMAELLQTVNN----PEITLYGVGSVEEEVGLRGAQTSAEHIK----PDVVIVLDTAVAGDVPGIDNIKYP 244 (356)
T ss_pred eCccHHHHHHHHHHHHHhhc----CCCeEEEEEEcchhcchHHHHHHHhcCC----CCEEEEEecccCCCCCCCcccccc
Confidence 68999999999999999954 6799999999999999999998774332 234677775421
Q ss_pred ----CCCcc-ccccCC--CHHHHHHHHHHccCCCCcccccccccCCCCCCCCchHHHhhc-CCCeEEEEEeecCCCCCCC
Q 005255 265 ----GGRSA-LFQAGP--NLWAVENFAAVAKYPSGQIIGQDLFASGVFETATDFQVYTEV-AGLSGLDFAYTDKSAVYHT 336 (706)
Q Consensus 265 ----gg~~~-lfq~g~--~~~li~~y~~~a~~p~~~~l~~e~f~~g~ips~TD~~~F~~~-~GiPgld~a~~~~~~~YHT 336 (706)
+|+.+ .+..|+ ++.+.+...+.|+. .+-..-.+.... .+||-..+... .|+|...+.- ..+ +-||
T Consensus 245 ~~lG~Gp~i~~~D~~~i~~~~l~~~l~~~A~~-~~Ip~Q~~~~~~----ggTDa~~i~~~~~Gvpt~~isi-P~R-Y~Hs 317 (356)
T PRK09864 245 LKLGQGPGLMLFDKRYFPNQKLVAALKSCAAH-NDLPLQFSTMKT----GATDGGRYNVMGGGRPVVALCL-PTR-YLHA 317 (356)
T ss_pred cccCCCCeEEEccCCccCCHHHHHHHHHHHHH-cCCCceEEEcCC----CCchHHHHHHhCCCCcEEEEee-ccC-cCCC
Confidence 22322 122233 67777766665432 111111112221 36776666442 6899987753 333 4688
Q ss_pred cCCCcCCCCHHHHHHHHHHHHHHHHHH
Q 005255 337 KNDRLDLLKPGSLQHLGENMLDFLLQT 363 (706)
Q Consensus 337 ~~Dt~d~id~~sLq~~g~~~l~ll~~l 363 (706)
+. +-++.+.++++.+.+.+++..+
T Consensus 318 ~~---e~~~~~D~e~~~~Ll~~~~~~l 341 (356)
T PRK09864 318 NS---GMISKADYDALLTLIRDFLTTL 341 (356)
T ss_pred cc---eEeEHHHHHHHHHHHHHHHHhc
Confidence 65 5567788888888777777664
No 76
>PLN02693 IAA-amino acid hydrolase
Probab=98.71 E-value=2.2e-07 Score=104.87 Aligned_cols=120 Identities=16% Similarity=0.241 Sum_probs=90.4
Q ss_pred HHHHHHHHHcCCCCCCCCHHHHHHHHHHHHHHHhhccccCCcceEEEEeeeccCCCcccccccccCccccccccceEEEE
Q 005255 89 AMKHVKALTQLGPHAVGSDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYSDLNHIVLR 168 (706)
Q Consensus 89 A~~~L~~L~~igpR~~gS~~~~~a~~yL~~~l~~ig~~~~~~~~vevd~f~~~~g~~~~~g~~~~~~~~~y~~~~NVi~~ 168 (706)
+.+..++|-+ +|.-|-++.++.+||.++|+++|. +++.. ....|++++
T Consensus 49 ~~~~r~~lh~---~PE~s~~E~~ta~~i~~~L~~~G~------~~~~~-----------------------~~~~~via~ 96 (437)
T PLN02693 49 MVRIRRKIHE---NPELGYEEFETSKLIRSELDLIGI------KYRYP-----------------------VAITGIIGY 96 (437)
T ss_pred HHHHHHHHHh---CCCCCCchHHHHHHHHHHHHHCCC------eeEec-----------------------CCCcEEEEE
Confidence 4444445544 455566778999999999999983 33221 024799999
Q ss_pred EcCCCCCCCCCCeEEEeecccccCCC-----------CC---CCCChhHHHHHHHHHHHHHhcCCCCCCcEEEEEeCCCC
Q 005255 169 ILPKYASEAGENAILVSSHIDTVSAG-----------EG---AGDCSSCVAVMLELARVMSQWAHEFKNAVIFLFNTGEE 234 (706)
Q Consensus 169 i~g~~~~~~~~~~Vll~aH~DSv~~~-----------pG---A~Dd~sgva~~LE~ar~L~~~~~~p~~~I~flf~~~EE 234 (706)
+.++ +.+.|++.+|+|+||.. +| +.|.++++|+++.+++.|.+.+.+.+.+|.|+|..+||
T Consensus 97 ~g~~-----~g~~i~l~~h~DaVp~~e~~~~~~~p~~~G~~hacGhkg~~A~~l~Aa~~L~~~~~~~~g~V~~if~pdEE 171 (437)
T PLN02693 97 IGTG-----EPPFVALRADMDALPIQEAVEWEHKSKIPGKMHACGHDGHVAMLLGAAKILQEHRHHLQGTVVLIFQPAEE 171 (437)
T ss_pred ECCC-----CCCEEEEEeecCCCcCCCCCCCCCCCCCCCCEECCcchHHHHHHHHHHHHHHhCcccCCceEEEEEEEccc
Confidence 8322 34789999999999852 12 77889999999999999988765667899999999999
Q ss_pred CCCcChHHHHhc
Q 005255 235 EGLNGAHSFVTQ 246 (706)
Q Consensus 235 ~gl~GS~~f~~~ 246 (706)
+..|++.++++
T Consensus 172 -~~~Ga~~~i~~ 182 (437)
T PLN02693 172 -GLSGAKKMREE 182 (437)
T ss_pred -chhhHHHHHHC
Confidence 55799999854
No 77
>PLN02280 IAA-amino acid hydrolase
Probab=98.68 E-value=3.7e-07 Score=104.09 Aligned_cols=124 Identities=20% Similarity=0.279 Sum_probs=89.5
Q ss_pred HHHHHHHHHHc-CCCCCCCCHHHHHHHHHHHHHHHhhccccCCcceEEEEeeeccCCCcccccccccCccccccccceEE
Q 005255 88 EAMKHVKALTQ-LGPHAVGSDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYSDLNHIV 166 (706)
Q Consensus 88 rA~~~L~~L~~-igpR~~gS~~~~~a~~yL~~~l~~ig~~~~~~~~vevd~f~~~~g~~~~~g~~~~~~~~~y~~~~NVi 166 (706)
+..+.|++|.+ +-.+|.-+.++.++.+||.++|++.|. +++.. ....|++
T Consensus 94 ~~~~~l~~l~r~lh~~PEls~~E~~t~~~i~~~L~~~G~------~~~~~-----------------------~~~~~vv 144 (478)
T PLN02280 94 DTVAWLKSVRRKIHENPELAFEEYKTSELVRSELDRMGI------MYRYP-----------------------LAKTGIR 144 (478)
T ss_pred HHHHHHHHHHHHHhcCCCCCCcHHHHHHHHHHHHHHCCC------eEEec-----------------------CCCCEEE
Confidence 33455555554 222444455667999999999999983 33321 0246999
Q ss_pred EEEcCCCCCCCCCCeEEEeecccccCCCC-----------C---CCCChhHHHHHHHHHHHHHhcCCCCCCcEEEEEeCC
Q 005255 167 LRILPKYASEAGENAILVSSHIDTVSAGE-----------G---AGDCSSCVAVMLELARVMSQWAHEFKNAVIFLFNTG 232 (706)
Q Consensus 167 ~~i~g~~~~~~~~~~Vll~aH~DSv~~~p-----------G---A~Dd~sgva~~LE~ar~L~~~~~~p~~~I~flf~~~ 232 (706)
+++ |++ +++.|++.+|+|+||... | +.|...++|+++.+++.|.+.+.+++.+|+|+|..+
T Consensus 145 a~~-g~~----~~~~I~l~gh~DaVP~~e~~~w~~~p~~~G~~h~cGhd~~~A~~l~a~~~L~~~~~~~~g~V~~if~pd 219 (478)
T PLN02280 145 AWI-GTG----GPPFVAVRADMDALPIQEAVEWEHKSKVAGKMHACGHDAHVAMLLGAAKILKSREHLLKGTVVLLFQPA 219 (478)
T ss_pred EEE-CCC----CCCEEEEEEecCCCcccCCCCCCCCCCCCCeEEeCCCcHHHHHHHHHHHHHHhccccCCceEEEEeccc
Confidence 998 431 237899999999998521 1 334556999999999999876666788999999999
Q ss_pred CCCCCcChHHHHhc
Q 005255 233 EEEGLNGAHSFVTQ 246 (706)
Q Consensus 233 EE~gl~GS~~f~~~ 246 (706)
||.| .|++.++++
T Consensus 220 EE~g-~Ga~~li~~ 232 (478)
T PLN02280 220 EEAG-NGAKRMIGD 232 (478)
T ss_pred cccc-chHHHHHHC
Confidence 9997 499999854
No 78
>COG4187 RocB Arginine degradation protein (predicted deacylase) [Amino acid transport and metabolism]
Probab=98.65 E-value=1.1e-07 Score=103.37 Aligned_cols=159 Identities=18% Similarity=0.215 Sum_probs=121.9
Q ss_pred CCCHHHHHHHHHHHHcCCCCCCCCHHHHHHHHHHHHHHHhhcc-ccCCcceEEEEeeeccCCCcccccccccCccccccc
Q 005255 83 GFSELEAMKHVKALTQLGPHAVGSDALDRALQYVLAASQKIKE-SKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYSD 161 (706)
Q Consensus 83 ~fs~erA~~~L~~L~~igpR~~gS~~~~~a~~yL~~~l~~ig~-~~~~~~~vevd~f~~~~g~~~~~g~~~~~~~~~y~~ 161 (706)
..+.||+.+..-.|++. |-..|++++..-.++|+..|.++-. +.|++ |.+.+. +. ...| .
T Consensus 4 ~is~e~v~~lt~~LV~~-~SvtgT~GE~a~ad~l~~vL~~~pYFqehpe-----d~~~~p-----i~-------nDpy-g 64 (553)
T COG4187 4 RISSERVRALTLSLVSW-PSVTGTPGEGAFADRLLGVLGELPYFQEHPE-----DLWLQP-----IH-------NDPY-G 64 (553)
T ss_pred hhhHHHHHHHHHHHeec-cccCCCcccccHHHHHHHHHhcCchhhhChH-----hhcccC-----CC-------CCcc-c
Confidence 35689999999999985 7788999999999999999998752 22221 111111 00 1123 4
Q ss_pred cceEEEEEcCCCCCCCCCCeEEEeecccccCC------------------------------------------CCCCCC
Q 005255 162 LNHIVLRILPKYASEAGENAILVSSHIDTVSA------------------------------------------GEGAGD 199 (706)
Q Consensus 162 ~~NVi~~i~g~~~~~~~~~~Vll~aH~DSv~~------------------------------------------~pGA~D 199 (706)
-.||.+-++|+ .+++.|++.+|+|+|.. ++|+.|
T Consensus 65 R~nv~AlVrg~----~~k~tvvl~gH~DtV~iedYg~lKd~Afdp~~ll~~~i~~~e~~~erv~~Dl~SGDwlfGRGa~D 140 (553)
T COG4187 65 RRNVFALVRGG----TSKRTVVLHGHFDTVSIEDYGELKDLAFDPLALLDALIESLELREERVLRDLESGDWLFGRGALD 140 (553)
T ss_pred cceeEEEEecC----CCCceEEEeeccceeecccccchhhhccCHHHHHHHHHHhhccCHHHHhhhhhccCcccCCCchh
Confidence 58999999984 46788999999999964 389999
Q ss_pred ChhHHHHHHHHHHHHHhcCCCCCCcEEEEEeCCCCCCCcChHHHHhcCCc-----cCCceEEEEeecCcCC
Q 005255 200 CSSCVAVMLELARVMSQWAHEFKNAVIFLFNTGEEEGLNGAHSFVTQHPW-----STTIRVAVDLEAMGIG 265 (706)
Q Consensus 200 d~sgva~~LE~ar~L~~~~~~p~~~I~flf~~~EE~gl~GS~~f~~~~~~-----~~~v~a~iNLD~~G~g 265 (706)
+++|.|+-|..++.+++. ...+.++.|+.+.+||....|.+.-+...+. .-...++||+|.++..
T Consensus 141 MKsGlav~la~L~~fa~~-~~~~GNlLf~a~pdEE~~s~G~r~a~~~L~~L~kk~~l~~~~~IN~D~~~~~ 210 (553)
T COG4187 141 MKSGLAVHLACLEEFAAR-TDRQGNLLFMAVPDEEVESRGMREARPALPGLKKKFDLEYTAAINLDVTSDQ 210 (553)
T ss_pred hhhhhHHHHHHHHHHhhC-CCCCCcEEEEeccchhhhcccHHHHHHHHHHHHHhhCceEEEEeccccccCC
Confidence 999999999999999986 4678899999999999988888876654432 2357899999998763
No 79
>COG4310 Uncharacterized protein conserved in bacteria with an aminopeptidase-like domain [General function prediction only]
Probab=98.55 E-value=4.6e-07 Score=94.70 Aligned_cols=175 Identities=18% Similarity=0.208 Sum_probs=127.8
Q ss_pred CCCeEEEeecccccCCCCCCCCChhHHHHHHHHHHHHHhcCCCCCCcEEEEEeCCCCCCCcChHHHHhcCCc-cCCceEE
Q 005255 178 GENAILVSSHIDTVSAGEGAGDCSSCVAVMLELARVMSQWAHEFKNAVIFLFNTGEEEGLNGAHSFVTQHPW-STTIRVA 256 (706)
Q Consensus 178 ~~~~Vll~aH~DSv~~~pGA~Dd~sgva~~LE~ar~L~~~~~~p~~~I~flf~~~EE~gl~GS~~f~~~~~~-~~~v~a~ 256 (706)
.++.|++++|..+.. =|+||-||+|.+.-+++.|+.. +.+.+-+|+|.. +-.||-.|..+|.+ .++++.-
T Consensus 177 ~~~eiLlst~lCHPS---maNdn~SG~all~~lak~l~~~--ktrysYRfvf~P----~TiGsi~wLsrnee~lkhvk~G 247 (435)
T COG4310 177 SKDEILLSTYLCHPS---MANDNLSGLALLTFLAKALKSL--KTRYSYRFVFAP----ETIGSIVWLSRNEECLKHVKHG 247 (435)
T ss_pred ccceeeeeecccChh---hccCccchHHHHHHHHHHHHhc--cceeeEEEEecc----cccchhhhHhcchhHHhhhhcc
Confidence 567799999999874 6899999999999999999875 568899999987 45899999988864 5799999
Q ss_pred EEeecCcCCCCccccccCCCHHHHHHHHHHc-cCCCCcccccccccCCCCCCCCchHHHhhc-CCCeEEEEE--eecCCC
Q 005255 257 VDLEAMGIGGRSALFQAGPNLWAVENFAAVA-KYPSGQIIGQDLFASGVFETATDFQVYTEV-AGLSGLDFA--YTDKSA 332 (706)
Q Consensus 257 iNLD~~G~gg~~~lfq~g~~~~li~~y~~~a-~~p~~~~l~~e~f~~g~ips~TD~~~F~~~-~GiPgld~a--~~~~~~ 332 (706)
+.+.+.|.+|....-++-....+++..+... .+-. +-. +++ ..+|.++|-+.|..- .++|...+. -++.-+
T Consensus 248 lVlsClGD~g~~nykrtrrgna~iDki~~~tl~~~~-s~~--~~~--dF~p~G~DERQf~sPg~NLpvg~~~Rs~yG~f~ 322 (435)
T COG4310 248 LVLSCLGDGGGPNYKRTRRGNALIDKIALHTLKHCG-SNF--KAA--DFLPYGSDERQFCSPGFNLPVGGLQRSRYGDFD 322 (435)
T ss_pred eEEEEecCCCCccceeccccchHHHHHHHHHHhcCC-cCc--eee--ecccCCCchhhccCCCcCCchhhhhHhhcCCCc
Confidence 9999999987666555433334555544322 2222 111 111 357889999999761 123322221 234456
Q ss_pred CCCCcCCCcCCCCHHHHHHHHHHHHHHHHHHhcC
Q 005255 333 VYHTKNDRLDLLKPGSLQHLGENMLDFLLQTASS 366 (706)
Q Consensus 333 ~YHT~~Dt~d~id~~sLq~~g~~~l~ll~~la~~ 366 (706)
-|||..|+.+.++++.|..--+.++.++..+-+.
T Consensus 323 ~YHtSaDnL~fi~~e~L~~s~~~~memI~~lE~N 356 (435)
T COG4310 323 GYHTSADNLDFISPEGLAGSFQMMMEMILNLEIN 356 (435)
T ss_pred cccCccccccccCHHHHHHHHHHHHHHHHHHHhc
Confidence 7999999999999999998888888888876554
No 80
>KOG2276 consensus Metalloexopeptidases [Amino acid transport and metabolism]
Probab=98.20 E-value=1.6e-05 Score=86.28 Aligned_cols=142 Identities=19% Similarity=0.279 Sum_probs=100.6
Q ss_pred CHHHHHHHHHHHHcCCCC---CCCCHHHHHHHHHHHHHHHhhccccCCcceEEEEeeeccCCCcccccccccCccccccc
Q 005255 85 SELEAMKHVKALTQLGPH---AVGSDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYSD 161 (706)
Q Consensus 85 s~erA~~~L~~L~~igpR---~~gS~~~~~a~~yL~~~l~~ig~~~~~~~~vevd~f~~~~g~~~~~g~~~~~~~~~y~~ 161 (706)
..++..+.|++..+|+.- +.....-.+..+|+.++++++|.. ++.- +-... +..+| .+..
T Consensus 14 ~~de~~~~L~e~v~iqsvs~dp~~r~~v~rm~~~~~~~l~~lG~~------~~l~--dlg~q-~~~~g--------~~v~ 76 (473)
T KOG2276|consen 14 NKDEFINTLREAVAIQSVSADPTKRLEVRRMADWLRDYLTKLGAP------LELV--DLGYQ-SLPDG--------QIVP 76 (473)
T ss_pred cHHHHHHHHHHHhcccccccCccccHHHHHHHHHHHHHHHHhCCc------eeee--ecccC-CCCCC--------cccc
Confidence 557889999999888651 222233458999999999999942 2221 11000 00011 1112
Q ss_pred cceEEEEEcCCCCCCCCCCeEEEeecccccCC---------------------CCCCCCChhHHHHHHHHHHHHHhcCCC
Q 005255 162 LNHIVLRILPKYASEAGENAILVSSHIDTVSA---------------------GEGAGDCSSCVAVMLELARVMSQWAHE 220 (706)
Q Consensus 162 ~~NVi~~i~g~~~~~~~~~~Vll~aH~DSv~~---------------------~pGA~Dd~sgva~~LE~ar~L~~~~~~ 220 (706)
..-++--..| ++++++.+++..|+|..|. ++|++||+.-|+.-.++++++.+.+..
T Consensus 77 lPpvvl~~~G---sdp~KktvlvYgHlDVqpA~~~DgW~TdPF~Lt~~~GkL~GRG~TDdkGPv~~wi~av~a~~~~g~~ 153 (473)
T KOG2276|consen 77 LPPVVLGVLG---SDPSKKTVLVYGHLDVQPANLEDGWNTDPFTLTEDDGKLFGRGATDDKGPVLSWIHAVKALQQLGID 153 (473)
T ss_pred cChhhhhccc---CCCCcceEEEEeeeeeeecCCCCCCcCCCeEEEEECCEEeccCcCCCCccchHHHHHHHHHHHhCcc
Confidence 2222222223 3567899999999999875 499999999999999999999999989
Q ss_pred CCCcEEEEEeCCCCCCCcChHHHHhc
Q 005255 221 FKNAVIFLFNTGEEEGLNGAHSFVTQ 246 (706)
Q Consensus 221 p~~~I~flf~~~EE~gl~GS~~f~~~ 246 (706)
++.+|+|+|-+-||.|..|-....++
T Consensus 154 lpvnv~f~~EgmEEsgS~~L~~l~~~ 179 (473)
T KOG2276|consen 154 LPVNVVFVFEGMEESGSEGLDELIEK 179 (473)
T ss_pred ccceEEEEEEechhccCccHHHHHHH
Confidence 99999999999999999888777654
No 81
>PF05343 Peptidase_M42: M42 glutamyl aminopeptidase; InterPro: IPR008007 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This group of metallopeptidases belong to MEROPS peptidase family M42 (glutamyl aminopeptidase family, clan MH). For members of this family and family M28 the predicted metal ligands occur in the same order in the sequence: H, D, E, D/E, H; and the active site residues occur in the motifs HXD and EE. ; PDB: 2WYR_C 2CF4_A 1VHO_A 3ISX_A 3KL9_G 1YLO_F 3CPX_C 1VHE_A 2GRE_F 1XFO_A ....
Probab=98.12 E-value=7.4e-06 Score=87.71 Aligned_cols=133 Identities=23% Similarity=0.302 Sum_probs=82.7
Q ss_pred CCCChhHHHHHHHHHHHHHhcCCCCCCcEEEEEeCCCCCCCcChHHHHhcCCccCCceEEEEeecC------cCC-----
Q 005255 197 AGDCSSCVAVMLELARVMSQWAHEFKNAVIFLFNTGEEEGLNGAHSFVTQHPWSTTIRVAVDLEAM------GIG----- 265 (706)
Q Consensus 197 A~Dd~sgva~~LE~ar~L~~~~~~p~~~I~flf~~~EE~gl~GS~~f~~~~~~~~~v~a~iNLD~~------G~g----- 265 (706)
+.||..||++++|++|.+.+. ..+.+++|+|+.-||.|+.|++..+.+. +...+|.+|.. |..
T Consensus 132 alDdR~g~~~lle~l~~l~~~--~~~~~v~~v~tvqEEvG~rGA~~aa~~i----~PD~ai~vD~~~a~d~~~~~~~~~~ 205 (292)
T PF05343_consen 132 ALDDRAGCAVLLELLRELKEK--ELDVDVYFVFTVQEEVGLRGAKTAAFRI----KPDIAIAVDVTPAGDTPGSDEKEQG 205 (292)
T ss_dssp THHHHHHHHHHHHHHHHHTTS--S-SSEEEEEEESSCTTTSHHHHHHHHHH-----CSEEEEEEEEEESSSTTSTTTTSC
T ss_pred eCCchhHHHHHHHHHHHHhhc--CCCceEEEEEEeeeeecCcceeeccccc----CCCEEEEEeeeccCCCCCCchhhcc
Confidence 669999999999999999875 4459999999999999999999877542 22345555543 221
Q ss_pred ---CCccccc-cCC--CHHHHHHHHHHccCCCCcccccccccCCCCCCCCchHHHhhc-CCCeEEEEEeecCCCCCCCcC
Q 005255 266 ---GRSALFQ-AGP--NLWAVENFAAVAKYPSGQIIGQDLFASGVFETATDFQVYTEV-AGLSGLDFAYTDKSAVYHTKN 338 (706)
Q Consensus 266 ---g~~~lfq-~g~--~~~li~~y~~~a~~p~~~~l~~e~f~~g~ips~TD~~~F~~~-~GiPgld~a~~~~~~~YHT~~ 338 (706)
|+.+... .++ ++.+.+...+.++. .+...-.+.+. ..+||-..+... .|+|...+..- -.+.||+.
T Consensus 206 lG~Gp~i~~~D~~~i~~~~l~~~l~~~A~~-~~Ip~Q~~~~~----~ggTDa~~~~~~~~Gi~t~~i~iP--~ry~Hs~~ 278 (292)
T PF05343_consen 206 LGKGPVIRVGDSSMIPNPKLVDKLREIAEE-NGIPYQREVFS----GGGTDAGAIQLSGGGIPTAVISIP--CRYMHSPV 278 (292)
T ss_dssp TTS-EEEEEEETTEESHHHHHHHHHHHHHH-TT--EEEEEES----SSSSTHHHHHTSTTSSEEEEEEEE--EBSTTSTT
T ss_pred CCCCcEEEEccCCCCCCHHHHHHHHHHHHH-cCCCeEEEecC----CcccHHHHHHHcCCCCCEEEEecc--cccCCCcc
Confidence 1222111 112 46666666655431 11111112222 347888888652 58999887642 23579876
Q ss_pred CCcC
Q 005255 339 DRLD 342 (706)
Q Consensus 339 Dt~d 342 (706)
-+.+
T Consensus 279 e~~~ 282 (292)
T PF05343_consen 279 EVID 282 (292)
T ss_dssp EEEE
T ss_pred eEEE
Confidence 5544
No 82
>KOG2657 consensus Transmembrane glycoprotein nicastrin [Signal transduction mechanisms; Posttranslational modification, protein turnover, chaperones]
Probab=97.58 E-value=0.00048 Score=76.87 Aligned_cols=189 Identities=14% Similarity=0.164 Sum_probs=124.6
Q ss_pred ccceEEEEEcCCCCC--C-CCCCeEEEeecccccC----CCCCCCCChhHHHHHHHHHHHHHhcC--CCCCCcEEEEEeC
Q 005255 161 DLNHIVLRILPKYAS--E-AGENAILVSSHIDTVS----AGEGAGDCSSCVAVMLELARVMSQWA--HEFKNAVIFLFNT 231 (706)
Q Consensus 161 ~~~NVi~~i~g~~~~--~-~~~~~Vll~aH~DSv~----~~pGA~Dd~sgva~~LE~ar~L~~~~--~~p~~~I~flf~~ 231 (706)
...||..-+++-..+ . .-.++++..+-+|+-. .++||.---++....|..+|.|.+.+ ...++++.|+|+.
T Consensus 156 ~~ynvws~l~pi~ts~tnk~~~~vvv~tarmdsrsfF~n~s~Ga~S~~~slv~~laaa~al~r~pai~nl~rnV~f~~f~ 235 (596)
T KOG2657|consen 156 HSYNVWSFLTPIPTSPTNKTISKVVVVTARMDSRSFFPNISVGAVSVLTSLVSVLAAARALKRQPAINNLNRNVFFAFFN 235 (596)
T ss_pred CCccceeccCccccccccCcCcceeeeeeecccccccccccCCccccchhHHHHHHHHHHhccCcccccccceeEEEEee
Confidence 557777776553211 1 2267899999999963 47888878899999999999998753 3678999999999
Q ss_pred CCCCCCcChHHHHhcC---C--c-cCC---ceEEEEeecCcCC--CCccccccCCC-----HHH---HHHHHHHc-cCCC
Q 005255 232 GEEEGLNGAHSFVTQH---P--W-STT---IRVAVDLEAMGIG--GRSALFQAGPN-----LWA---VENFAAVA-KYPS 291 (706)
Q Consensus 232 ~EE~gl~GS~~f~~~~---~--~-~~~---v~a~iNLD~~G~g--g~~~lfq~g~~-----~~l---i~~y~~~a-~~p~ 291 (706)
+|-.+.+||..++-+. + . .++ +..++.+-.+|-+ ++..++..+-. ... ++.+++.. .+++
T Consensus 236 get~~ylgS~r~~yeme~gk~pva~~s~~~iD~~LEiGqvg~~~s~kl~~~~d~~~~~sv~nqtld~L~~~ekSlrs~~f 315 (596)
T KOG2657|consen 236 GETLDYLGSGRAAYEMENGKFPVAIRSDNEIDYILEIGQVGVAKSRKLYVHVDGERYQSVKNQTLDVLDRIEKSLRSHAF 315 (596)
T ss_pred cceeeeccchhhhhHhhcCCCCeeeccCccchheeeecccccccCceEEEEeccchhhhHHHHHHHHHHHHHhcccccCe
Confidence 9999999999777443 1 1 133 7778888777753 22223332111 122 23333321 1222
Q ss_pred CcccccccccCCCCCCCCchHHHhhcCCCeEEEEEeecC---CCCCCCcCCCcCCCCHHHHHH
Q 005255 292 GQIIGQDLFASGVFETATDFQVYTEVAGLSGLDFAYTDK---SAVYHTKNDRLDLLKPGSLQH 351 (706)
Q Consensus 292 ~~~l~~e~f~~g~ips~TD~~~F~~~~GiPgld~a~~~~---~~~YHT~~Dt~d~id~~sLq~ 351 (706)
. .+.++- ++..+|..+=++..+...++.++-++-.+. ..+||+.+|+.|+++...-..
T Consensus 316 ~-ll~~s~-~s~~lPPsSlqsFlR~dpn~saVvLad~~~~f~NKyYhSilDdaeNin~sy~~a 376 (596)
T KOG2657|consen 316 D-LLKPSG-SSDRLPPSSLQSFLRADPNVSAVVLADYGKEFENKYYHSILDDAENINDSYEKA 376 (596)
T ss_pred e-eecCCC-CCCCCChHHHHHHHhhCCCcceEEeccCCchhhhhhhhhhhcchhhccchhhhh
Confidence 1 111211 223467777777777558899998887653 347999999999999876644
No 83
>COG2195 PepD Di- and tripeptidases [Amino acid transport and metabolism]
Probab=97.04 E-value=0.0012 Score=73.83 Aligned_cols=60 Identities=18% Similarity=0.104 Sum_probs=48.5
Q ss_pred CCChhHHHHHHHHHHHHHhcC-CCCCCcEEEEEeCCCCCCCcChHHHHhcCCccCCceEEEEee
Q 005255 198 GDCSSCVAVMLELARVMSQWA-HEFKNAVIFLFNTGEEEGLNGAHSFVTQHPWSTTIRVAVDLE 260 (706)
Q Consensus 198 ~Dd~sgva~~LE~ar~L~~~~-~~p~~~I~flf~~~EE~gl~GS~~f~~~~~~~~~v~a~iNLD 260 (706)
.||++|.+.++++++.+.+.. .-+..+|++.|+++||.|+.|++.+.-. .-.+....++|
T Consensus 143 aD~kAGia~i~~al~~~~~~~~~i~h~~i~~g~s~~Ee~g~rg~~~~~~a---~f~a~~ay~iD 203 (414)
T COG2195 143 ADDKAGIAEIMTALSVLREKHPEIPHGGIRGGFSPDEEIGGRGAANKDVA---RFLADFAYTLD 203 (414)
T ss_pred CcchhHHHHHHHHHHHHhhcCccccccCeEEEecchHHhhhhhhhhccHH---hhhcceeEecC
Confidence 488999999999999999653 4577899999999999999999988632 23455667777
No 84
>PF04114 Gaa1: Gaa1-like, GPI transamidase component ; InterPro: IPR007246 GPI (glycosyl phosphatidyl inositol) transamidase is a multiprotein complex required for a terminal step of adding the glycosylphosphatidylinositol (GPI) anchor attachment onto proteins. Gpi16, Gpi8 and Gaa1 form a sub-complex of the GPI transamidase.; GO: 0016021 integral to membrane, 0042765 GPI-anchor transamidase complex
Probab=96.65 E-value=0.037 Score=63.82 Aligned_cols=185 Identities=16% Similarity=0.200 Sum_probs=115.0
Q ss_pred ccceEEEEEcCCCCCCCCCCeEEEeecccccCCCCCCCCChhHHHHHHHHHHHHHhcCCCCCCcEEEEEeCCCCCCCcCh
Q 005255 161 DLNHIVLRILPKYASEAGENAILVSSHIDTVSAGEGAGDCSSCVAVMLELARVMSQWAHEFKNAVIFLFNTGEEEGLNGA 240 (706)
Q Consensus 161 ~~~NVi~~i~g~~~~~~~~~~Vll~aH~DSv~~~pGA~Dd~sgva~~LE~ar~L~~~~~~p~~~I~flf~~~EE~gl~GS 240 (706)
++.|+++.++... .+..+.+++.+-+++.. | .-|..|++.+|.++|.+++... ..++|+|++.++|. .|.
T Consensus 2 ~G~nvy~i~rapR--~d~tEaivl~~~~~~~~---~-~~n~~~v~l~lal~~~~~~~~~-wsKDii~l~~~~~~---~g~ 71 (504)
T PF04114_consen 2 SGTNVYGILRAPR--GDGTEAIVLVVPWRDSD---G-EYNAGGVALALALARYFRRQSY-WSKDIIFLFTDDEL---AGM 71 (504)
T ss_pred CceEEEEEEecCC--CCCceeEEEEEecCCCC---c-ccchhhHHHHHHHHHHhhhchh-hhccEEEEecCCcc---hHH
Confidence 4689999887543 34668899999988663 3 4458999999999999998653 47999999998654 678
Q ss_pred HHHHhcCCc--------------cCCceEEEEeecCcCCCCcccc--c--cC--CCHHHHHHHHHHccCC---CCccc--
Q 005255 241 HSFVTQHPW--------------STTIRVAVDLEAMGIGGRSALF--Q--AG--PNLWAVENFAAVAKYP---SGQII-- 295 (706)
Q Consensus 241 ~~f~~~~~~--------------~~~v~a~iNLD~~G~gg~~~lf--q--~g--~~~~li~~y~~~a~~p---~~~~l-- 295 (706)
++|.+++-. +..+++.+|+|-.+......-. + +| ||-.+++...+.+.+. .+...
T Consensus 72 ~awl~~Yh~~~~~~~~~~~l~~~~G~i~aAl~le~~~~~~~~v~i~~eG~NGqLPNLDL~N~~~~i~~~~gi~~~~~~~~ 151 (504)
T PF04114_consen 72 QAWLEAYHDSNTKGLSSSPLPLRAGSIQAALVLEYPSDSFSSVEIKYEGLNGQLPNLDLVNTVVRIAEKEGIPMGVSLHL 151 (504)
T ss_pred HHHHHHHhCCCCccccccCCCCCCcceeEEEEEEecCCCccEEEEEEecCCCCCCCchHHHHHHHHHHhcCCCccccccc
Confidence 899875311 1368899999988765443221 1 22 3445666544433211 10000
Q ss_pred ------ccc------------cccCCCCCCCCchHHHhhcCCCeEEEEEeecCCCCCCCcCCCcCCCCHHHHHHHHHHHH
Q 005255 296 ------GQD------------LFASGVFETATDFQVYTEVAGLSGLDFAYTDKSAVYHTKNDRLDLLKPGSLQHLGENML 357 (706)
Q Consensus 296 ------~~e------------~f~~g~ips~TD~~~F~~~~GiPgld~a~~~~~~~YHT~~Dt~d~id~~sLq~~g~~~l 357 (706)
..+ ..+.+.-....+|..|.+ .+|.++.+.-.+.. .+ . .....+.|+.+.
T Consensus 152 ~~~~~~~~~~~~~~l~~l~~~~~~~a~g~p~g~H~~f~~-y~I~aiTl~~~~~~------~~--~---~~~~~~~gr~~E 219 (504)
T PF04114_consen 152 QPSDWHSNSDYESRLKTLLRGMLNQALGGPTGPHGAFLR-YRIDAITLRGVKST------GP--G---PHDFTAFGRILE 219 (504)
T ss_pred cccccccccchHHHHHHHHHHHHHhccCCCCCCchhhhh-cCccEEEEecccCC------CC--C---CcCHHHHHHHHH
Confidence 000 001112223567889998 78999988321111 11 1 123566788888
Q ss_pred HHHHHHhcCC
Q 005255 358 DFLLQTASST 367 (706)
Q Consensus 358 ~ll~~la~~~ 367 (706)
..+|.+-|-.
T Consensus 220 ~~~RslNNLl 229 (504)
T PF04114_consen 220 GIFRSLNNLL 229 (504)
T ss_pred HHHHHHHHHH
Confidence 8888877643
No 85
>COG1473 AbgB Metal-dependent amidase/aminoacylase/carboxypeptidase [General function prediction only]
Probab=96.33 E-value=0.077 Score=59.34 Aligned_cols=129 Identities=17% Similarity=0.239 Sum_probs=91.1
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHhhccccCCcceEEEEeeeccCCCcccccccccCccccccccceEEEEEcCCCCCCCC
Q 005255 99 LGPHAVGSDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYSDLNHIVLRILPKYASEAG 178 (706)
Q Consensus 99 igpR~~gS~~~~~a~~yL~~~l~~ig~~~~~~~~vevd~f~~~~g~~~~~g~~~~~~~~~y~~~~NVi~~i~g~~~~~~~ 178 (706)
+--+|.-+-++.++.+||.+.|++.|. ++ ++. + ...+-++++++++ .+
T Consensus 21 lH~~PEL~f~E~~Ta~~i~~~L~~~g~------~~-~~~-----------~----------~~~TGvva~~~~g----~~ 68 (392)
T COG1473 21 LHEHPELGFEEYRTAAYIAEKLEELGF------EV-VEV-----------G----------GGKTGVVATLKGG----KP 68 (392)
T ss_pred HhhCCccchhHHHHHHHHHHHHHHcCC------ee-Eec-----------c----------CCceEEEEEEcCC----CC
Confidence 444666677788999999999999984 21 110 0 0135688999864 24
Q ss_pred CCeEEEeecccccCC-----------CCC---CCCChhHHHHHHHHHHHHHhcCCCCCCcEEEEEeCCCCCCCcChHHHH
Q 005255 179 ENAILVSSHIDTVSA-----------GEG---AGDCSSCVAVMLELARVMSQWAHEFKNAVIFLFNTGEEEGLNGAHSFV 244 (706)
Q Consensus 179 ~~~Vll~aH~DSv~~-----------~pG---A~Dd~sgva~~LE~ar~L~~~~~~p~~~I~flf~~~EE~gl~GS~~f~ 244 (706)
.+.|.+-|-||-.|. .+| |+-=-.=.+++|-+++.|++...+++.+|+|+|-.+||.+. |++.++
T Consensus 69 g~tIalRAD~DALPi~E~t~~~~~S~~~G~mHACGHD~Hta~lLgaA~~L~~~~~~~~Gtv~~ifQPAEE~~~-Ga~~mi 147 (392)
T COG1473 69 GPTIALRADMDALPIQEETGLPFASKNPGVMHACGHDGHTAILLGAALALAEHKDNLPGTVRLIFQPAEEGGG-GAKAMI 147 (392)
T ss_pred CCEEEEEeecccCccccccCCCcccCCCCCcccCCchHHHHHHHHHHHHHHhhhhhCCcEEEEEecccccccc-cHHHHH
Confidence 458999999999884 244 11112337888999999988656789999999999999887 999998
Q ss_pred hcCCccCC-ceEEEEeec
Q 005255 245 TQHPWSTT-IRVAVDLEA 261 (706)
Q Consensus 245 ~~~~~~~~-v~a~iNLD~ 261 (706)
++- ..++ +.+++-+..
T Consensus 148 ~~G-~~~~~vD~v~g~H~ 164 (392)
T COG1473 148 EDG-VFDDFVDAVFGLHP 164 (392)
T ss_pred hcC-CccccccEEEEecC
Confidence 543 2233 666665543
No 86
>PRK02813 putative aminopeptidase 2; Provisional
Probab=91.51 E-value=0.7 Score=52.42 Aligned_cols=146 Identities=14% Similarity=0.101 Sum_probs=83.8
Q ss_pred CCCCCChhHHHHHHHHHHHHHhcCCCCCCcEEEEEeCCCCCCCc---ChHH-----------HHhcCC-----ccCCceE
Q 005255 195 EGAGDCSSCVAVMLELARVMSQWAHEFKNAVIFLFNTGEEEGLN---GAHS-----------FVTQHP-----WSTTIRV 255 (706)
Q Consensus 195 pGA~Dd~sgva~~LE~ar~L~~~~~~p~~~I~flf~~~EE~gl~---GS~~-----------f~~~~~-----~~~~v~a 255 (706)
.++-||-.||.+++|+++.+.+ +.++++++++-||.|+. ||+. -..... ..-.-..
T Consensus 230 s~~lDnr~~~~~~l~al~~~~~-----~~~~~~~~~d~EEVGs~~~~GA~s~~l~~~l~ri~~~~~~~~~~~~~~i~~s~ 304 (428)
T PRK02813 230 SGRLDNLSSCHAGLEALLAAAS-----DATNVLAAFDHEEVGSATKQGADSPFLEDVLERIVLALGGDREDFLRALARSF 304 (428)
T ss_pred EecchhHHHHHHHHHHHHhcCC-----CCeEEEEEEecCccCCCCCcccCchhHHHHHHHHHHhhcCchHHHHHhhCCCe
Confidence 4688999999999999986532 67899999999999998 7774 110000 1123356
Q ss_pred EEEeecCcCC------------------CCccccc--cC--CCHHHHHHHHHHccCCCCcccccccccCCCCCCCCchHH
Q 005255 256 AVDLEAMGIG------------------GRSALFQ--AG--PNLWAVENFAAVAKYPSGQIIGQDLFASGVFETATDFQV 313 (706)
Q Consensus 256 ~iNLD~~G~g------------------g~~~lfq--~g--~~~~li~~y~~~a~~p~~~~l~~e~f~~g~ips~TD~~~ 313 (706)
+|.+|++-+. |+.+-+. .+ +++.....+.+.++. .+ .-.|.....+..|++||-.+
T Consensus 305 ~IS~DvahA~hPn~~~~~~~~~~~~lg~GpvIk~~~~~~y~t~~~~~a~~~~ia~~-~~-Ip~Q~~v~~~d~~gGstig~ 382 (428)
T PRK02813 305 LISADMAHAVHPNYPEKHDPTHRPLLNKGPVIKINANQRYATDAESAAVFKLLCEK-AG-VPYQEFVNRSDMPCGSTIGP 382 (428)
T ss_pred EEEEeccCCCCCCCCCccCcccCccCCcCCeEEECCCCCcccCHHHHHHHHHHHHH-cC-CCEEEEEecCCCCCccHHHH
Confidence 7777765332 1111111 01 234433333333211 11 11122112234567899888
Q ss_pred Hhh-cCCCeEEEEEeecCCCCCCCcCCCcCCCCHHHH
Q 005255 314 YTE-VAGLSGLDFAYTDKSAVYHTKNDRLDLLKPGSL 349 (706)
Q Consensus 314 F~~-~~GiPgld~a~~~~~~~YHT~~Dt~d~id~~sL 349 (706)
+.. ..|+|.+|+.- +--+-||+..+...-|.+.+
T Consensus 383 i~~s~~Gi~tvdiGi--P~l~MHS~~E~~~~~D~~~~ 417 (428)
T PRK02813 383 ITAARLGIRTVDVGA--PMLAMHSARELAGVKDHAYL 417 (428)
T ss_pred HHHhCCCCcEEEeCh--hhcccccHHHHccHHHHHHH
Confidence 865 47999999853 12245998777665554433
No 87
>PTZ00371 aspartyl aminopeptidase; Provisional
Probab=91.24 E-value=1.6 Score=50.01 Aligned_cols=153 Identities=12% Similarity=0.043 Sum_probs=87.0
Q ss_pred CCCCCChhHHHHHHHHHHHHHhcC-CCCCCcEEEEEeCCCCCCCcChHHHHhcC-Cc-------cCCce-----------
Q 005255 195 EGAGDCSSCVAVMLELARVMSQWA-HEFKNAVIFLFNTGEEEGLNGAHSFVTQH-PW-------STTIR----------- 254 (706)
Q Consensus 195 pGA~Dd~sgva~~LE~ar~L~~~~-~~p~~~I~flf~~~EE~gl~GS~~f~~~~-~~-------~~~v~----------- 254 (706)
.++-||..||.+++|+++...... ..+....++++++-||.|..|++.-.... +. ..+..
T Consensus 247 s~rlDnr~~~~~~l~al~~~~~~~~~~~~~~~v~~~~d~EEVGs~ga~GA~s~~l~d~l~ri~~~~~~~~~~~~~~~~~~ 326 (465)
T PTZ00371 247 SPRLDNLGSSFCAFKALTEAVESLGENSSNIRMVCLFDHEEVGSSSSQGAGSSLLPDTIERILSSLSASNNSSDDSFAKL 326 (465)
T ss_pred EecchhHHHHHHHHHHHHhccccccCCCCceEEEEEECCcCCCCCcchhccccccHHHHHHHHHhhccccccchhHHHHH
Confidence 467899999999999998764310 11334455555999999998877654322 11 01111
Q ss_pred ----EEEEeecCcC------------------CCCccccc----cCCCHHHHHHHHHHccCCCCcccccccccCCCCCCC
Q 005255 255 ----VAVDLEAMGI------------------GGRSALFQ----AGPNLWAVENFAAVAKYPSGQIIGQDLFASGVFETA 308 (706)
Q Consensus 255 ----a~iNLD~~G~------------------gg~~~lfq----~g~~~~li~~y~~~a~~p~~~~l~~e~f~~g~ips~ 308 (706)
.+|..|++-+ +|+.+-+. ..+++.....+.+.++. .+ .-.|.....+-.|++
T Consensus 327 ~~~S~~IS~DvahA~hPn~~~~~d~~~~~~lg~GpvIk~~a~~~y~td~~~~a~i~~la~~-~~-Ip~Q~~~~~~d~~~G 404 (465)
T PTZ00371 327 MARSFLLSVDMAHAVHPNYPEKHQANHRPKFHEGIVIKYNANQRYATNGVTASLLKAIAKK-AN-IPIQEFVVKNDSPCG 404 (465)
T ss_pred HhccEEEEEecccccCCCCccccCCcCceeCCCCcEEEEeCCCCcccCHHHHHHHHHHHHH-cC-CCEEEEEecCCCCCc
Confidence 7888887533 12221111 11245555544444321 11 112222222345678
Q ss_pred CchHHHhh-cCCCeEEEEEeecCCCCCCCcCCCcCCCCHHHHHH
Q 005255 309 TDFQVYTE-VAGLSGLDFAYTDKSAVYHTKNDRLDLLKPGSLQH 351 (706)
Q Consensus 309 TD~~~F~~-~~GiPgld~a~~~~~~~YHT~~Dt~d~id~~sLq~ 351 (706)
||-.++.. ..|+|.+|+.- +--.-||+..+...-|.+.+-+
T Consensus 405 sTig~i~~s~~Gi~tvDiGi--P~l~MHS~rE~~~~~D~~~~~~ 446 (465)
T PTZ00371 405 STIGPILSSNLGIRTVDIGI--PQLAMHSIREMCGVVDIYYLVK 446 (465)
T ss_pred chHHHHHHhCCCCcEEEech--hhcccccHHHHccHHHHHHHHH
Confidence 88888865 47999999853 1224599887776666554444
No 88
>PRK02256 putative aminopeptidase 1; Provisional
Probab=85.28 E-value=1.3 Score=50.77 Aligned_cols=57 Identities=19% Similarity=0.167 Sum_probs=43.6
Q ss_pred EEEeecccccCCCCCCCCChhHHHHHHHHHHHHHhcCCCCCCcEEEEEeCCCCCCCcChHHHH
Q 005255 182 ILVSSHIDTVSAGEGAGDCSSCVAVMLELARVMSQWAHEFKNAVIFLFNTGEEEGLNGAHSFV 244 (706)
Q Consensus 182 Vll~aH~DSv~~~pGA~Dd~sgva~~LE~ar~L~~~~~~p~~~I~flf~~~EE~gl~GS~~f~ 244 (706)
-+++.+-|=+ +.++-||..||.+++|+++... .++..+++++++-||.|+.|++.-.
T Consensus 245 ~~~G~~~efI--~s~rLDNr~~~~~~leal~~~~----~~~~~~~~~~~dqEEVGs~ga~gA~ 301 (462)
T PRK02256 245 RDVGLDRSLI--GAYGQDDRVCAYTSLEALLELE----NPEKTAVVLLVDKEEIGSEGNTGAQ 301 (462)
T ss_pred ceecccccee--eccccccHHHHHHHHHHHHhcc----cCCCeEEEEEEcccccCCcchhhhc
Confidence 3444444433 4678999999999999998653 3567899999999999998776544
No 89
>KOG3566 consensus Glycosylphosphatidylinositol anchor attachment protein GAA1 [Posttranslational modification, protein turnover, chaperones]
Probab=74.19 E-value=19 Score=42.00 Aligned_cols=93 Identities=22% Similarity=0.326 Sum_probs=67.2
Q ss_pred ccceEEEEEcCCCCCCCCCCeEEEeecccccCCCCCCCCChhHHHHHHHHHHHHHhcCCCCCCcEEEEEeCCCCCCCcCh
Q 005255 161 DLNHIVLRILPKYASEAGENAILVSSHIDTVSAGEGAGDCSSCVAVMLELARVMSQWAHEFKNAVIFLFNTGEEEGLNGA 240 (706)
Q Consensus 161 ~~~NVi~~i~g~~~~~~~~~~Vll~aH~DSv~~~pGA~Dd~sgva~~LE~ar~L~~~~~~p~~~I~flf~~~EE~gl~GS 240 (706)
.+.||.+.+++.. .+..+.+++..-||.-. |. |..|++.++..++.++++. --.++|+|++++++ ..|-
T Consensus 119 ~G~NvyGilRAPR--gdgtEsivl~vP~~~~~---~~--~~~~v~l~lsla~~f~r~~-yWsKDII~v~~d~~---~~g~ 187 (617)
T KOG3566|consen 119 SGENVYGILRAPR--GDGTESIVLVVPYGRSS---GS--NSASVALLLSLADYFSRWV-YWSKDIIFVFTDGP---ALGL 187 (617)
T ss_pred CCceEEEEEecCC--CCCcceEEEEEecccCC---Cc--chhHHHHHHHHHHHhcCCe-eecccEEEEEeCCc---cccH
Confidence 3789999998643 34567888888887653 33 4788999999999998764 34789999999984 5677
Q ss_pred HHHHhcCCc-----------------cCCceEEEEeecCcC
Q 005255 241 HSFVTQHPW-----------------STTIRVAVDLEAMGI 264 (706)
Q Consensus 241 ~~f~~~~~~-----------------~~~v~a~iNLD~~G~ 264 (706)
++|.+++-+ +....+.+++|....
T Consensus 188 ~AwLeaYhd~~s~~~~~~ep~~i~~ragal~aal~l~~se~ 228 (617)
T KOG3566|consen 188 DAWLEAYHDILSLTGISVEPDEIQARAGALAAALVLEVSEK 228 (617)
T ss_pred HHHHHHhhccccccccccccccccccccceeeEEEEEeccc
Confidence 788765322 123467888888744
No 90
>PF06781 UPF0233: Uncharacterised protein family (UPF0233); InterPro: IPR009619 This is a group of proteins of unknown function.
Probab=60.46 E-value=18 Score=32.00 Aligned_cols=30 Identities=13% Similarity=-0.013 Sum_probs=19.9
Q ss_pred chhhhHHHHHHHHHHHHHHHHHhhhhhccc
Q 005255 40 SAKRSGLVWTVVFATLICASYGVYYYQYEH 69 (706)
Q Consensus 40 ~~~r~~~~~l~~~ll~~~~~~~v~~~~~~~ 69 (706)
+.-+..+.-+.+.++++-..|+++.|....
T Consensus 27 ~~sp~W~~p~m~~lmllGL~WiVvyYi~~~ 56 (87)
T PF06781_consen 27 KPSPRWYAPLMLGLMLLGLLWIVVYYISGG 56 (87)
T ss_pred CCCCccHHHHHHHHHHHHHHHHhhhhcccC
Confidence 455666777777777776677777766543
No 91
>PF10190 Tmemb_170: Putative transmembrane protein 170; InterPro: IPR019334 This entry represents a group of putative transmembrane proteins conserved from nematodes to humans. The protein is only approximately 130 amino acids in length. The function is unknown.
Probab=50.60 E-value=1.8e+02 Score=26.80 Aligned_cols=49 Identities=10% Similarity=-0.019 Sum_probs=36.0
Q ss_pred HHHHhcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcccc
Q 005255 421 ASLVMGGYPAAVSLALTCLSAILMLVLSISFSVVIAFILPQISSSPVPYV 470 (706)
Q Consensus 421 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vA~~~~~~~~~~~sw~ 470 (706)
..+.+.+.....++.....+.+.....+...+.++|.+..+. +.+|+++
T Consensus 32 ~~lRkhk~~~f~pi~~l~mg~l~p~~~G~itSa~IA~vY~a~-~~~M~~~ 80 (105)
T PF10190_consen 32 FTLRKHKFGRFIPIVILLMGVLGPLTGGSITSAAIAGVYRAA-GFRMSTW 80 (105)
T ss_pred HHHhhccchhhhHHHHHHHHHHHHHHHhHHHHHHHHHHHHHc-CCcccHH
Confidence 344444445566777777777778888999999999998754 7888875
No 92
>PF12911 OppC_N: N-terminal TM domain of oligopeptide transport permease C
Probab=45.06 E-value=24 Score=27.81 Aligned_cols=38 Identities=13% Similarity=0.162 Sum_probs=25.5
Q ss_pred HHHHhCCchhHHHHHHHHHHHHHHHHHcCCCCCCCCCC
Q 005255 651 YVHLSGAKGPIAFASFILVGLSIIMVSSGIIPPFSEET 688 (706)
Q Consensus 651 ~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~fPy~~~~ 688 (706)
...+++|.|.-+.++.++.++.++.+..+.+.||+++.
T Consensus 8 ~~~~f~~nk~a~~gl~il~~~vl~ai~~p~~~p~~~~~ 45 (56)
T PF12911_consen 8 AWRRFRRNKLAVIGLIILLILVLLAIFAPFISPYDPNQ 45 (56)
T ss_pred HHHHHHhCchHHHHHHHHHHHHHHHHHHHHcCCCCcch
Confidence 34567777777777766666666666677778996443
No 93
>PRK08651 succinyl-diaminopimelate desuccinylase; Reviewed
Probab=40.51 E-value=60 Score=35.84 Aligned_cols=56 Identities=11% Similarity=0.199 Sum_probs=43.7
Q ss_pred CCCCchHHHhhcCCCeEEEEEeecCCCCCCCcCCCcCCCCHHHHHHHHHHHHHHHHHHhcC
Q 005255 306 ETATDFQVYTEVAGLSGLDFAYTDKSAVYHTKNDRLDLLKPGSLQHLGENMLDFLLQTASS 366 (706)
Q Consensus 306 ps~TD~~~F~~~~GiPgld~a~~~~~~~YHT~~Dt~d~id~~sLq~~g~~~l~ll~~la~~ 366 (706)
...||...|.+ .|+|.+.+... +...-|++. |+++.+.+....+....++.+|++.
T Consensus 338 ~g~tD~~~~~~-~gip~v~~Gpg-~~~~~H~~~---E~i~~~~l~~~~~i~~~~i~~l~~~ 393 (394)
T PRK08651 338 LGGTDARFFGA-KGIPTVVYGPG-ELELAHAPD---EYVEVKDVEKAAKVYEEVLKRLAKG 393 (394)
T ss_pred cCcccHHHHhh-CCCcEEEECCC-ChHhcCCCC---ceeEHHHHHHHHHHHHHHHHHhhcC
Confidence 46799999987 89999765322 222467755 8899999999999999999998764
No 94
>PRK08596 acetylornithine deacetylase; Validated
Probab=37.49 E-value=64 Score=36.24 Aligned_cols=57 Identities=16% Similarity=0.193 Sum_probs=45.6
Q ss_pred CCCCchHHHhhcCCCeEEEEEeecCCCCCCCcCCCcCCCCHHHHHHHHHHHHHHHHHHhcCC
Q 005255 306 ETATDFQVYTEVAGLSGLDFAYTDKSAVYHTKNDRLDLLKPGSLQHLGENMLDFLLQTASST 367 (706)
Q Consensus 306 ps~TD~~~F~~~~GiPgld~a~~~~~~~YHT~~Dt~d~id~~sLq~~g~~~l~ll~~la~~~ 367 (706)
+..||...|.+ .|+|++.+.... ....|++. |+++.+.+....+.+..++..+...+
T Consensus 363 ~g~tD~~~~~~-~gip~v~~Gpg~-~~~~H~~~---E~v~i~~~~~~~~~~~~~l~~~~~~~ 419 (421)
T PRK08596 363 TTVTDGGWFAE-FGIPAVIYGPGT-LEEAHSVN---EKVEIEQLIEYTKVITAFIYEWCHTK 419 (421)
T ss_pred eeecchhhhhh-cCCCEEEECCCc-ccccCCCC---ceEEHHHHHHHHHHHHHHHHHHhCCC
Confidence 45789999987 899998765432 34578855 89999999999999999999887654
No 95
>PRK08126 hypothetical protein; Provisional
Probab=33.90 E-value=7.7e+02 Score=28.24 Aligned_cols=53 Identities=8% Similarity=0.054 Sum_probs=34.0
Q ss_pred eEEEeecccccCCCCCC--CCChhHHHHHHHHHHHHHhcCCCCCCcEEEEEeCCCC
Q 005255 181 AILVSSHIDTVSAGEGA--GDCSSCVAVMLELARVMSQWAHEFKNAVIFLFNTGEE 234 (706)
Q Consensus 181 ~Vll~aH~DSv~~~pGA--~Dd~sgva~~LE~ar~L~~~~~~p~~~I~flf~~~EE 234 (706)
.|.+.+|.|..|...|. ....-+.+=.-.+.+.|.+.|.. +..|.....++.+
T Consensus 355 ~I~V~GHTD~~p~~s~~~~~N~~LS~~RA~aV~~~L~~~Gv~-~~ri~~~G~G~~~ 409 (432)
T PRK08126 355 KVTVTGHTDNQPIRSAQFASNLVLSEKRAAQVAQMLQSAGVP-ASRLEAVGKGDAQ 409 (432)
T ss_pred eEEEEEecCCCCccCCccchHHHHHHHHHHHHHHHHHHcCCC-HHHeEEEEecCcC
Confidence 69999999999864443 23345555666777777776644 4446655555444
No 96
>PRK07522 acetylornithine deacetylase; Provisional
Probab=32.96 E-value=1.2e+02 Score=33.35 Aligned_cols=74 Identities=12% Similarity=0.086 Sum_probs=50.7
Q ss_pred CHHHHHHHHHHccCCCCcccccccccCCCCCCCCchHHHhhcCCCeEEEEEeecCCCCCCCcCCCcCCCCHHHHHHHHHH
Q 005255 276 NLWAVENFAAVAKYPSGQIIGQDLFASGVFETATDFQVYTEVAGLSGLDFAYTDKSAVYHTKNDRLDLLKPGSLQHLGEN 355 (706)
Q Consensus 276 ~~~li~~y~~~a~~p~~~~l~~e~f~~g~ips~TD~~~F~~~~GiPgld~a~~~~~~~YHT~~Dt~d~id~~sLq~~g~~ 355 (706)
+..+++.+.++...+... ..+..||-..|.. .|+|.+.+... +....||+. |+++.+.+....+.
T Consensus 311 ~~~~v~~~~~~~~~~~~~----------~~~~~td~~~~~~-~gip~v~~Gpg-~~~~~H~~~---E~i~i~~l~~~~~~ 375 (385)
T PRK07522 311 DAAAARLVRALTGDNDLR----------KVAYGTEAGLFQR-AGIPTVVCGPG-SIEQAHKPD---EFVELAQLAACEAF 375 (385)
T ss_pred CcHHHHHHHHHhCCCCcc----------eEeeecchHHhcc-CCCCEEEECCC-ChhhCCCCC---ccccHHHHHHHHHH
Confidence 345677766653332110 1234689988986 89999865432 223678855 88999999999999
Q ss_pred HHHHHHHHh
Q 005255 356 MLDFLLQTA 364 (706)
Q Consensus 356 ~l~ll~~la 364 (706)
+..++..+|
T Consensus 376 ~~~~~~~~~ 384 (385)
T PRK07522 376 LRRLLASLA 384 (385)
T ss_pred HHHHHHHHh
Confidence 999988776
No 97
>PF07466 DUF1517: Protein of unknown function (DUF1517); InterPro: IPR010903 This family consists of several hypothetical glycine rich plant and bacterial proteins of around 300 residues in length. The function of this family is unknown.
Probab=31.73 E-value=6.9e+02 Score=27.02 Aligned_cols=48 Identities=15% Similarity=0.088 Sum_probs=34.2
Q ss_pred HHHHHHHHHHHHhcCCCCCCcEEEEEeCCCCCCCcChHHHHhcCCccC
Q 005255 204 VAVMLELARVMSQWAHEFKNAVIFLFNTGEEEGLNGAHSFVTQHPWST 251 (706)
Q Consensus 204 va~~LE~ar~L~~~~~~p~~~I~flf~~~EE~gl~GS~~f~~~~~~~~ 251 (706)
...+=|+++.|.......-..+.+++...||.-.+-...+..++|..+
T Consensus 240 ~~~l~~aL~~l~~~~~~~l~a~evlWtP~~~gd~Ls~~ell~~yP~L~ 287 (289)
T PF07466_consen 240 AEDLREALRKLGSISSDRLLAVEVLWTPQAEGDTLSEDELLADYPDLK 287 (289)
T ss_pred HHHHHHHHHHHhCCChhheeeEEEEECCCCCCCccCHHHHHHhCcccc
Confidence 345666666665432233457899999999999888888888887643
No 98
>PRK00159 putative septation inhibitor protein; Reviewed
Probab=30.62 E-value=85 Score=27.86 Aligned_cols=27 Identities=19% Similarity=0.022 Sum_probs=15.5
Q ss_pred hhhhHHHHHHHHHHHHHHHHHhhhhhc
Q 005255 41 AKRSGLVWTVVFATLICASYGVYYYQY 67 (706)
Q Consensus 41 ~~r~~~~~l~~~ll~~~~~~~v~~~~~ 67 (706)
.-+..+.-+.+.++++-..|+++.|..
T Consensus 28 ~sp~W~~~~m~glm~~GllWlvvyYl~ 54 (87)
T PRK00159 28 PSSVWYVVLMLGLMLIGLAWLVVNYLA 54 (87)
T ss_pred CCCccHHHHHHHHHHHHHHHHHHHhhc
Confidence 344555566666666655666665543
No 99
>PRK07338 hypothetical protein; Provisional
Probab=28.53 E-value=93 Score=34.49 Aligned_cols=55 Identities=18% Similarity=0.194 Sum_probs=43.3
Q ss_pred CCCCchHHHhhcCCCeEEE-EEeecCCCCCCCcCCCcCCCCHHHHHHHHHHHHHHHHHHhcC
Q 005255 306 ETATDFQVYTEVAGLSGLD-FAYTDKSAVYHTKNDRLDLLKPGSLQHLGENMLDFLLQTASS 366 (706)
Q Consensus 306 ps~TD~~~F~~~~GiPgld-~a~~~~~~~YHT~~Dt~d~id~~sLq~~g~~~l~ll~~la~~ 366 (706)
+..+|-..|.. .|+|.++ +... +...|++. |+++.+++....+.+..++..++..
T Consensus 345 ~g~tDa~~~~~-~giP~v~~~Gpg--~~~~H~~~---E~v~i~~l~~~~~~~~~~l~~~~~~ 400 (402)
T PRK07338 345 GGVCDGNNLAA-AGLPVVDTLGVR--GGNIHSED---EFVILDSLVERAQLSALILMRLAQG 400 (402)
T ss_pred CccchHHHHhh-cCCCeEeccCCC--CCCCCCcc---ceEehhhHHHHHHHHHHHHHHHhcC
Confidence 56799999987 7999996 3332 33468865 8899999999999999999988653
No 100
>PRK06133 glutamate carboxypeptidase; Reviewed
Probab=27.10 E-value=81 Score=35.33 Aligned_cols=57 Identities=9% Similarity=0.056 Sum_probs=45.3
Q ss_pred CCCCchHHHhhcCCCeEEEEEeecCCCCCCCcCCCcCCCCHHHHHHHHHHHHHHHHHHhcC
Q 005255 306 ETATDFQVYTEVAGLSGLDFAYTDKSAVYHTKNDRLDLLKPGSLQHLGENMLDFLLQTASS 366 (706)
Q Consensus 306 ps~TD~~~F~~~~GiPgld~a~~~~~~~YHT~~Dt~d~id~~sLq~~g~~~l~ll~~la~~ 366 (706)
+..+|...|.. .|+|.+-+.+...+..-|++. |+++.+.+....+.+..++.++++.
T Consensus 353 ~g~tDa~~~~~-~gip~v~~g~G~~~~~aH~~n---E~i~i~~~~~~~~~~~~~~~~~~~~ 409 (410)
T PRK06133 353 GGGTDAAFAAG-SGKAAVLEGFGLVGFGAHSND---EYIELNSIVPRLYLLTRMIMELSRD 409 (410)
T ss_pred CCCchHHHHHh-cCCCceEecccCCCCCCCCCC---cEEEcccHHHHHHHHHHHHHHhhcC
Confidence 56799999987 799988755443334578876 8899999999999999999988763
No 101
>TIGR01880 Ac-peptdase-euk N-acyl-L-amino-acid amidohydrolase. This model represents a family of eukaryotic N-acyl-L-amino-acid amidohydrolases active on fatty acid and acetyl amides of L-amino acids.
Probab=25.50 E-value=1.2e+02 Score=33.53 Aligned_cols=56 Identities=21% Similarity=0.268 Sum_probs=43.3
Q ss_pred CCCCchHHHhhcCCCeEEEEEeecC-CCCCCCcCCCcCCCCHHHHHHHHHHHHHHHHHHhc
Q 005255 306 ETATDFQVYTEVAGLSGLDFAYTDK-SAVYHTKNDRLDLLKPGSLQHLGENMLDFLLQTAS 365 (706)
Q Consensus 306 ps~TD~~~F~~~~GiPgld~a~~~~-~~~YHT~~Dt~d~id~~sLq~~g~~~l~ll~~la~ 365 (706)
+..||...|.+ .|+|.+.+.-... ....|++.. +++.+.+.+..+....++.++++
T Consensus 343 ~g~tDa~~~~~-~gip~v~fgp~~~~~~~aH~~dE---~i~i~~l~~~~~~~~~~l~~~~~ 399 (400)
T TIGR01880 343 PGSTDSRYIRA-AGVPALGFSPMNNTPVLLHDHNE---FLNEAVFLRGIEIYQTLISALAS 399 (400)
T ss_pred cCcchHHHHHh-CCCCeEEECCccCCcccccCCCC---ceEHHHHHHHHHHHHHHHHHhhc
Confidence 46799999987 8999976543322 225798654 79999999999999999998864
No 102
>PF05421 DUF751: Protein of unknown function (DUF751); InterPro: IPR008470 This family, Ycf33, contains several plant, cyanobacterial and algal chlorplast encoded proteins of unknown function. The family is exclusively found in phototrophic organisms and may therefore play a role in photosynthesis.
Probab=24.67 E-value=2.9e+02 Score=22.88 Aligned_cols=28 Identities=14% Similarity=-0.035 Sum_probs=19.8
Q ss_pred HHHHHHHHHHHHHHHHHhCCchhHHHHH
Q 005255 638 AVVSCLTLVYLLSYVHLSGAKGPIAFAS 665 (706)
Q Consensus 638 a~~~~l~~~~l~p~~~~~~~~~~i~~~l 665 (706)
+.+..+....+-|+..+.|+|..-+...
T Consensus 14 s~~lG~~~~~~~pl~~llk~p~tai~~i 41 (61)
T PF05421_consen 14 SVMLGLFLIIFEPLKPLLKNPVTAIALI 41 (61)
T ss_pred HHHHHHHHHHHHHHHHHhcCchHHHHHH
Confidence 3344455678899999999987655443
No 103
>PRK07033 hypothetical protein; Provisional
Probab=24.46 E-value=1.1e+03 Score=26.95 Aligned_cols=54 Identities=11% Similarity=0.051 Sum_probs=35.2
Q ss_pred CeEEEeecccccCCCCC--CCCChhHHHHHHHHHHHHHhcCCCCCCcEEEEEeCCCC
Q 005255 180 NAILVSSHIDTVSAGEG--AGDCSSCVAVMLELARVMSQWAHEFKNAVIFLFNTGEE 234 (706)
Q Consensus 180 ~~Vll~aH~DSv~~~pG--A~Dd~sgva~~LE~ar~L~~~~~~p~~~I~flf~~~EE 234 (706)
..|.+.+|-|+.+...+ ..+..-+.+=.-.+.+.|.+.+..++ .|.....++++
T Consensus 345 ~~I~V~GHTD~~~~~~~~~~~N~~LS~~RA~aV~~~L~~~Gi~~~-ri~~~G~G~~~ 400 (427)
T PRK07033 345 GNVLVTGYSDNVPIRTARFPSNWELSQARAQAVRALLAARLGQPE-RVTAEGRGDSD 400 (427)
T ss_pred CeEEEEEEeCCCCccccccchHHHHHHHHHHHHHHHHHHcCCCcc-eEEEEEECCCC
Confidence 46999999999975333 23445556666777888887765443 46655555544
No 104
>PRK09804 putative cryptic C4-dicarboxylate transporter DcuD; Provisional
Probab=22.33 E-value=4.2e+02 Score=30.57 Aligned_cols=56 Identities=23% Similarity=0.240 Sum_probs=38.1
Q ss_pred HHHHHHHhHHHHHHH--HHHHHHHHHHHhccccccCCCCCCCCccchhHHHHHHHHHHHHHHHHHHH
Q 005255 585 LATLLLGLAVPVLVS--AGNIIRLANVLVATLVRFDRNPGGTPEWLGNVIFAVVIAVVSCLTLVYLL 649 (706)
Q Consensus 585 ~~~~~~~~~~p~~~~--~~~~~~~~~~~~p~~gr~~~~~~~~P~~~~d~~ia~~~a~~~~l~~~~l~ 649 (706)
...++++|++-+... +.+...+...+.|++-|.|-+| ..-|++++..+++-.+.+-
T Consensus 118 ~~~~llg~llsl~IpSAaGLa~lLmatl~PvLi~~Gvs~---------~~AaaVia~t~~i~~gP~s 175 (455)
T PRK09804 118 SATYVIGQIMAQFITSASGLGMLLMVTLFPTLVSLGVSR---------LSAVAVIATTMSIEWGILE 175 (455)
T ss_pred HHHHHHHHHHHhccccHHhHHHHHHHHHHHHHHHcCCCH---------HHHHHHHHhhhcccCCCCC
Confidence 346677777776655 4788889999999999988654 3455566655555455433
No 105
>PRK13009 succinyl-diaminopimelate desuccinylase; Reviewed
Probab=22.20 E-value=1.6e+02 Score=32.16 Aligned_cols=53 Identities=17% Similarity=0.221 Sum_probs=41.9
Q ss_pred CCCCchHHHhhcCCCeEEEEEeecCCCCCCCcCCCcCCCCHHHHHHHHHHHHHHHHHHh
Q 005255 306 ETATDFQVYTEVAGLSGLDFAYTDKSAVYHTKNDRLDLLKPGSLQHLGENMLDFLLQTA 364 (706)
Q Consensus 306 ps~TD~~~F~~~~GiPgld~a~~~~~~~YHT~~Dt~d~id~~sLq~~g~~~l~ll~~la 364 (706)
+..||.+.|.+ .|+|.+.+.-.. ...|++. |+++.+.+....+....++.+|.
T Consensus 322 ~g~tda~~~~~-~g~p~v~~Gp~~--~~~H~~~---E~i~~~~l~~~~~~~~~~~~~~~ 374 (375)
T PRK13009 322 GGTSDARFIAD-YGAQVVEFGPVN--ATIHKVN---ECVSVADLEKLTRIYERILERLL 374 (375)
T ss_pred CCCccHHHHHH-cCCCeEEeccCc--ccCCCCC---CcEEHHHHHHHHHHHHHHHHHHh
Confidence 35689988887 899998765432 3478876 89999999999999988887764
No 106
>PF10337 DUF2422: Protein of unknown function (DUF2422); InterPro: IPR018823 This domain is found in proteins conserved in fungi. Their function is not known. This entry represents the N-terminal half of some member proteins which contain IPR018820 from INTERPRO at their C terminus.
Probab=20.88 E-value=1.3e+03 Score=26.38 Aligned_cols=33 Identities=15% Similarity=0.072 Sum_probs=23.5
Q ss_pred HHHHHHHHhHHHHHHHHHHHHHHHHHHhccccc
Q 005255 584 KLATLLLGLAVPVLVSAGNIIRLANVLVATLVR 616 (706)
Q Consensus 584 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~p~~gr 616 (706)
....+.-..+.|+++...+....-.++.|.+.|
T Consensus 186 ~~~~l~~~ll~P~~ig~ai~~~vslliFP~sss 218 (459)
T PF10337_consen 186 FAYTLGKTLLKPFLIGIAIALVVSLLIFPESSS 218 (459)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHheeecCCCch
Confidence 334445556788888888777777777787766
No 107
>PRK13983 diaminopimelate aminotransferase; Provisional
Probab=20.67 E-value=2.3e+02 Score=31.15 Aligned_cols=51 Identities=16% Similarity=0.136 Sum_probs=38.5
Q ss_pred CCCCchHHHhhcCCCeEEEEEeecCCCCCCCcCCCcCCCCHHHHHHHHHHHHHHHHH
Q 005255 306 ETATDFQVYTEVAGLSGLDFAYTDKSAVYHTKNDRLDLLKPGSLQHLGENMLDFLLQ 362 (706)
Q Consensus 306 ps~TD~~~F~~~~GiPgld~a~~~~~~~YHT~~Dt~d~id~~sLq~~g~~~l~ll~~ 362 (706)
+..||...|.. .|+|++.+.. .....|++. |+++.+++....+....++.+
T Consensus 349 ~g~td~~~~~~-~gip~v~~Gp--~~~~~H~~n---E~v~i~~l~~~~~~~~~~~~~ 399 (400)
T PRK13983 349 GGGTVAAFLRK-KGYPAVVWST--LDETAHQPN---EYAKISNLIEDAKVFALLLLE 399 (400)
T ss_pred cCcHHHHHHHH-cCCCEEEeCC--ccccCCCCC---ceeeHHHHHHHHHHHHHHHhc
Confidence 46789888876 7999987732 233578865 889999999988887777653
No 108
>PRK02251 putative septation inhibitor protein; Reviewed
Probab=20.02 E-value=1.7e+02 Score=26.03 Aligned_cols=26 Identities=23% Similarity=0.170 Sum_probs=15.5
Q ss_pred hhhhHHHHHHHHHHHHHHHHHhhhhh
Q 005255 41 AKRSGLVWTVVFATLICASYGVYYYQ 66 (706)
Q Consensus 41 ~~r~~~~~l~~~ll~~~~~~~v~~~~ 66 (706)
.-+..+..+.+.++++-..|+++.|.
T Consensus 29 ~sP~W~~~~m~~lm~~Gl~WlvvyYl 54 (87)
T PRK02251 29 SNPRWFVPLFVALMIIGLIWLVVYYL 54 (87)
T ss_pred CCCchHHHHHHHHHHHHHHHHHHHhh
Confidence 34455666666666666666666554
Done!