Query 005255
Match_columns 706
No_of_seqs 402 out of 2023
Neff 6.4
Searched_HMMs 29240
Date Mon Mar 25 20:03:57 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/005255.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/005255hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4fuu_A Leucine aminopeptidase; 100.0 2.3E-40 7.8E-45 353.0 23.6 253 82-362 20-307 (309)
2 4f9u_A CG32412; alpha/beta hyd 100.0 2E-36 6.9E-41 322.7 26.8 260 84-371 8-305 (312)
3 3tc8_A Leucine aminopeptidase; 100.0 3.1E-36 1.1E-40 321.2 26.0 250 81-362 19-308 (309)
4 3gux_A Putative Zn-dependent e 100.0 1.8E-35 6.3E-40 315.7 25.9 249 82-362 22-312 (314)
5 4fai_A CG5976, isoform B; alph 100.0 9.5E-36 3.3E-40 320.3 23.5 253 84-362 35-321 (330)
6 3pb6_X Glutaminyl-peptide cycl 100.0 1.5E-34 5.2E-39 310.3 23.4 262 73-363 23-327 (330)
7 2afw_A Glutaminyl-peptide cycl 100.0 9.6E-33 3.3E-37 296.7 24.8 269 67-364 9-327 (329)
8 1tkj_A Aminopeptidase, SGAP; d 100.0 2.5E-32 8.6E-37 287.4 26.1 255 82-370 2-282 (284)
9 1rtq_A Bacterial leucyl aminop 100.0 1.6E-30 5.5E-35 275.5 22.9 262 82-370 15-293 (299)
10 3kas_A Transferrin receptor pr 100.0 6.4E-30 2.2E-34 295.3 17.0 209 160-373 264-491 (640)
11 2ek8_A Aminopeptidase; metallo 100.0 9.7E-28 3.3E-32 265.9 25.4 198 162-372 203-408 (421)
12 3fed_A Glutamate carboxypeptid 100.0 8E-29 2.7E-33 288.7 12.6 209 159-372 309-553 (707)
13 3iib_A Peptidase M28; YP_92679 100.0 9.7E-28 3.3E-32 267.7 17.9 200 160-369 233-436 (444)
14 3k9t_A Putative peptidase; str 99.8 2.5E-20 8.6E-25 202.0 20.3 179 169-367 174-357 (435)
15 4h2k_A Succinyl-diaminopimelat 99.7 3.8E-17 1.3E-21 170.1 18.6 232 87-365 6-268 (269)
16 3t68_A Succinyl-diaminopimelat 99.7 2.1E-17 7.3E-22 171.9 14.9 232 87-365 6-268 (268)
17 1q7l_A Aminoacylase-1; catalys 99.7 1.1E-15 3.6E-20 152.2 15.8 146 83-258 6-174 (198)
18 1vhe_A Aminopeptidase/glucanas 99.6 2.6E-15 9.1E-20 163.4 18.2 226 87-366 7-355 (373)
19 1y0y_A FRV operon protein FRVX 99.6 3.9E-15 1.3E-19 160.8 18.0 220 89-365 8-350 (353)
20 2gre_A Deblocking aminopeptida 99.6 3.7E-15 1.3E-19 160.8 16.4 223 85-361 4-343 (349)
21 2wyr_A Cobalt-activated peptid 99.6 4.6E-15 1.6E-19 158.7 16.6 215 89-362 4-331 (332)
22 2fvg_A Endoglucanase; TM1049, 99.5 2.9E-14 1E-18 153.1 13.4 219 92-365 3-335 (340)
23 3n5f_A L-carbamoylase, N-carba 99.5 1.8E-13 6.1E-18 150.3 17.1 129 84-246 2-142 (408)
24 2zog_A Cytosolic non-specific 99.5 5.4E-13 1.9E-17 149.2 18.9 156 85-261 18-200 (479)
25 1cg2_A Carboxypeptidase G2; me 99.4 5.2E-13 1.8E-17 145.7 14.9 147 85-263 17-181 (393)
26 2pok_A Peptidase, M20/M25/M40 99.4 1.5E-12 5E-17 146.1 14.5 145 86-261 42-210 (481)
27 3ct9_A Acetylornithine deacety 99.4 2.8E-12 9.6E-17 138.4 16.1 135 86-262 10-164 (356)
28 3ife_A Peptidase T; metallopep 99.4 1.3E-12 4.3E-17 144.8 13.3 139 87-261 27-224 (434)
29 3dlj_A Beta-Ala-His dipeptidas 99.4 9.5E-12 3.2E-16 139.8 18.5 157 85-262 23-208 (485)
30 3pfo_A Putative acetylornithin 99.4 4.9E-12 1.7E-16 139.5 15.4 158 87-263 26-205 (433)
31 3gb0_A Peptidase T; NP_980509. 99.4 3.6E-12 1.2E-16 137.8 13.5 149 83-263 2-168 (373)
32 2v8h_A Beta-alanine synthase; 99.3 4.2E-12 1.4E-16 142.4 14.2 128 83-245 28-175 (474)
33 3tx8_A Succinyl-diaminopimelat 99.3 6E-12 2E-16 135.9 13.8 139 87-262 13-167 (369)
34 1z2l_A Allantoate amidohydrola 99.3 5.6E-12 1.9E-16 138.8 13.3 127 85-245 7-145 (423)
35 1vho_A Endoglucanase; structur 99.3 4.1E-11 1.4E-15 128.7 18.4 226 88-366 6-337 (346)
36 1ylo_A Hypothetical protein SF 99.3 3.9E-11 1.3E-15 128.7 16.8 220 91-364 7-337 (348)
37 2rb7_A Peptidase, M20/M25/M40 99.3 1E-11 3.5E-16 134.3 12.0 139 85-261 4-164 (364)
38 1lfw_A PEPV; hydrolase, dipept 99.3 4.8E-11 1.6E-15 133.1 17.6 127 85-248 12-168 (470)
39 1vgy_A Succinyl-diaminopimelat 99.3 1.8E-11 6.2E-16 133.5 12.9 142 85-262 4-168 (393)
40 3rza_A Tripeptidase; phosphory 99.3 1.9E-11 6.4E-16 133.6 12.3 153 81-263 18-189 (396)
41 1fno_A Peptidase T; metallo pe 99.2 1.3E-11 4.4E-16 135.7 10.6 139 87-262 2-198 (417)
42 3kl9_A PEPA, glutamyl aminopep 99.2 1.4E-10 4.8E-15 125.6 17.4 225 87-364 3-345 (355)
43 3mru_A Aminoacyl-histidine dip 99.2 3.1E-11 1.1E-15 136.0 12.3 140 82-262 9-175 (490)
44 3khx_A Putative dipeptidase sa 99.2 7.6E-11 2.6E-15 132.8 15.4 136 85-260 32-196 (492)
45 3isz_A Succinyl-diaminopimelat 99.2 1E-10 3.4E-15 126.0 14.4 139 87-261 3-164 (377)
46 3pfe_A Succinyl-diaminopimelat 99.2 5.1E-11 1.8E-15 133.4 12.4 145 87-261 18-192 (472)
47 3cpx_A Aminopeptidase, M42 fam 99.2 4.3E-11 1.5E-15 127.8 9.7 224 88-362 18-320 (321)
48 1xmb_A IAA-amino acid hydrolas 99.1 4.7E-10 1.6E-14 123.5 16.7 135 87-260 28-176 (418)
49 2f7v_A Aectylcitrulline deacet 99.1 1.3E-10 4.5E-15 125.7 11.8 130 86-262 8-160 (369)
50 2qyv_A XAA-His dipeptidase; YP 99.1 1.9E-10 6.6E-15 129.1 12.4 139 83-262 7-172 (487)
51 1ysj_A Protein YXEP; M20 famil 99.1 6.3E-10 2.2E-14 121.9 15.2 137 86-259 31-181 (404)
52 2vpu_A TET3, 354AA long hypoth 99.1 2.8E-09 9.4E-14 115.4 17.6 223 88-365 10-349 (354)
53 3ram_A HMRA protein; two-domai 99.0 2.1E-09 7.1E-14 117.6 12.2 142 86-262 15-158 (394)
54 3isx_A Endoglucanase; TM1050, 98.8 6.1E-08 2.1E-12 104.4 17.7 213 90-360 14-341 (343)
55 3io1_A Aminobenzoyl-glutamate 98.8 5E-08 1.7E-12 108.4 15.6 160 86-261 13-210 (445)
56 2wzn_A TET3, 354AA long hypoth 98.5 2E-06 6.7E-11 88.9 16.3 57 306-367 294-351 (354)
57 3iib_A Peptidase M28; YP_92679 93.6 0.079 2.7E-06 58.6 6.4 42 84-125 18-60 (444)
58 2ijz_A Probable M18-family ami 92.4 0.25 8.4E-06 54.5 8.1 151 194-359 230-421 (428)
59 2glf_A Probable M18-family ami 92.2 0.18 6.3E-06 55.8 6.9 150 196-361 246-448 (450)
60 3fed_A Glutamate carboxypeptid 87.7 0.72 2.4E-05 54.0 7.0 43 82-125 20-62 (707)
61 3vat_A Dnpep, aspartyl aminope 83.0 1.4 4.7E-05 49.3 6.1 158 196-364 282-487 (496)
62 3kas_A Transferrin receptor pr 82.3 0.45 1.6E-05 55.0 2.0 44 83-126 14-59 (640)
63 2glj_A Probable M18-family ami 78.7 0.67 2.3E-05 51.5 1.7 45 196-244 258-302 (461)
64 1y7e_A Probable M18-family ami 76.2 0.43 1.5E-05 53.0 -0.7 45 196-243 252-296 (458)
65 1q7l_B Aminoacylase-1; catalys 50.5 27 0.00093 28.8 5.8 59 305-367 23-82 (88)
66 2lx0_A Membrane fusion protein 40.8 25 0.00086 23.3 3.0 18 631-648 7-24 (32)
67 2ijz_A Probable M18-family ami 37.3 16 0.00055 40.0 2.9 75 103-192 12-86 (428)
68 2glf_A Probable M18-family ami 37.2 64 0.0022 35.5 7.6 68 106-192 30-97 (450)
69 2l8s_A Integrin alpha-1; trans 37.1 54 0.0019 25.4 4.9 36 621-658 4-39 (54)
70 2knc_A Integrin alpha-IIB; tra 23.2 1.4E+02 0.0046 23.1 5.0 34 623-658 9-42 (54)
71 3pfo_A Putative acetylornithin 20.4 54 0.0018 35.0 3.2 57 306-367 375-431 (433)
No 1
>4fuu_A Leucine aminopeptidase; phosphorylase/hydrolase like fold, peptidase family M28, STR genomics, joint center for structural genomics; 1.30A {Bacteroides thetaiotaomicron}
Probab=100.00 E-value=2.3e-40 Score=352.99 Aligned_cols=253 Identities=18% Similarity=0.197 Sum_probs=197.3
Q ss_pred CCCCHHHHHHHHHHHHcCCCCCCCCHHHHHHHHHHHHHHHhhccccCCcceEEEEeeeccCCCcccccccccCccccccc
Q 005255 82 RGFSELEAMKHVKALTQLGPHAVGSDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYSD 161 (706)
Q Consensus 82 ~~fs~erA~~~L~~L~~igpR~~gS~~~~~a~~yL~~~l~~ig~~~~~~~~vevd~f~~~~g~~~~~g~~~~~~~~~y~~ 161 (706)
++||++||++++++++++|||+.||++++++++||+++|+++|. +++.|.|..... ...+.+
T Consensus 20 p~f~~~~a~~~l~~l~~fgpR~~gS~~~~~a~~~i~~~l~~~g~------~v~~q~~~~~~~------------~~~~~~ 81 (309)
T 4fuu_A 20 PQFDADSAYLYVKNQVDFGPRVPNTKEHVACGNYLAGKLEAFGA------KVTNQYADLIAY------------DGTLLK 81 (309)
T ss_dssp CCCCHHHHHHHHHHHHTTCCCCTTSHHHHHHHHHHHHHHHHTTC------EEEEEEEEEECT------------TSCEEE
T ss_pred CccCHHHHHHHHHHHhCcCCcCCCCHHHHHHHHHHHHHHHHcCC------eeEEEeEEeccC------------CCCcce
Confidence 47999999999999999999999999999999999999999983 567666554211 112236
Q ss_pred cceEEEEEcCCCCCCCCCCeEEEeecccccCCC-------------CCCCCChhHHHHHHHHHHHHHhcCCCCCCcEEEE
Q 005255 162 LNHIVLRILPKYASEAGENAILVSSHIDTVSAG-------------EGAGDCSSCVAVMLELARVMSQWAHEFKNAVIFL 228 (706)
Q Consensus 162 ~~NVi~~i~g~~~~~~~~~~Vll~aH~DSv~~~-------------pGA~Dd~sgva~~LE~ar~L~~~~~~p~~~I~fl 228 (706)
..|||++++|+ .++.|+++|||||++.+ +||+||++|||+|||++|.|.+. +++++|+|+
T Consensus 82 ~~Nii~~~~g~-----~~~~i~l~aH~Ds~~~~~~~~~~~~~~~~~~GA~D~aSG~a~lLE~ar~l~~~--~~~~~i~~~ 154 (309)
T 4fuu_A 82 ARNIIGSYKPE-----SKKRIALFAHWDTRPWADNDADEKNHHTPILGANDGASGVGALLEIARLVNQQ--QPELGIDII 154 (309)
T ss_dssp EEEEEEEESTT-----CSSEEEEEEECCCCSCCTTCSSGGGTTSCCCCTTTTHHHHHHHHHHHHHHHHS--CCSSEEEEE
T ss_pred eEEEEEEECCC-----CCceEEEEeecCCCCCCCCccccccccCCcCCcccCchhHHHHHHHHHHHhhc--CCCCceEEE
Confidence 78999999985 45789999999999753 69999999999999999999875 689999999
Q ss_pred EeCCCCCCC--------------cChHHHHhcCC-ccCCceEEEEeecCcCCCCccccccCC---CHHHHHHHHHHccCC
Q 005255 229 FNTGEEEGL--------------NGAHSFVTQHP-WSTTIRVAVDLEAMGIGGRSALFQAGP---NLWAVENFAAVAKYP 290 (706)
Q Consensus 229 f~~~EE~gl--------------~GS~~f~~~~~-~~~~v~a~iNLD~~G~gg~~~lfq~g~---~~~li~~y~~~a~~p 290 (706)
|+++||.|+ .||+.|+++++ +..+++++||+||+|.+++....+.+. .+.+.+...+.++..
T Consensus 155 ~~~~EE~Gl~~~~~~~~~~~~~l~GS~~~~~~~~~~~~~i~~~inlDmvG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (309)
T 4fuu_A 155 FLDAEDYGTPQFYEGKHKEEAWCLGSQYWSRNPHVQGYNARFGILLDMVGGENSVFLKEGYSEEFAPDINKKVWKAAKKA 234 (309)
T ss_dssp EECSSSCCCCTTCCSCCCGGGSCHHHHHHHHSCSSTTCCCSEEEEECSCCBTTCCEEECHHHHHHCHHHHHHHHHHHHHT
T ss_pred eecccccCccccccchhhhhhhhcchhHHHhcccccCcceEEEEeeeccCCCCCceEeecCchhhhHHHHHHHHHHHHhc
Confidence 999999995 79999997654 457899999999999887765544222 233444444332211
Q ss_pred CCcccccccccCCCCCCCCchHHHhhcCCCeEEEEEeec----CCCCCCCcCCCcCCCCHHHHHHHHHHHHHHHHH
Q 005255 291 SGQIIGQDLFASGVFETATDFQVYTEVAGLSGLDFAYTD----KSAVYHTKNDRLDLLKPGSLQHLGENMLDFLLQ 362 (706)
Q Consensus 291 ~~~~l~~e~f~~g~ips~TD~~~F~~~~GiPgld~a~~~----~~~~YHT~~Dt~d~id~~sLq~~g~~~l~ll~~ 362 (706)
..... ...+.+. ..++||.+|.+.+|||+++++... ..++|||+.||+|++|+++||++|+++++++++
T Consensus 235 ~~~~~--~~~~~~~-~~~sDh~~F~~~~GIP~l~~~~~~~~~~~~~~yHT~~Dt~d~id~~~L~~vg~~vl~~ly~ 307 (309)
T 4fuu_A 235 GYGKT--FIDERGD-TITDDHLFINRLARIKTIDIIPNDPETGFPPTWHTIHDNMDHIDKNTLKAVGQTVLEVIYN 307 (309)
T ss_dssp TCTTT--EEEEECC-CCCCHHHHHHHHTCCCEEEECBC----CCCTTTTSTTCSGGGBCHHHHHHHHHHHHHHHHH
T ss_pred CCccc--ccccCCC-CCCCChHHHHhcCCCCEEEEeccCCCCCCCCCCCCcccchhhCCHHHHHHHHHHHHHHHhh
Confidence 11110 0112222 246899999876899999997643 245899999999999999999999999999874
No 2
>4f9u_A CG32412; alpha/beta hydrolase, PGlu formation, PE, alzheimer'S diseas pyroglutamate, PGlu-amyloid, glycosylation, transferase, HY; HET: PBD NAG BMA MAN; 1.80A {Drosophila melanogaster} PDB: 4f9v_A*
Probab=100.00 E-value=2e-36 Score=322.65 Aligned_cols=260 Identities=18% Similarity=0.249 Sum_probs=195.3
Q ss_pred CCHHHHHHHHHHHHcCCCCCCCCHHHHHHHHHHHHHHHhhccccCCcceEEEEeeeccCCCcccccccccCccccccccc
Q 005255 84 FSELEAMKHVKALTQLGPHAVGSDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYSDLN 163 (706)
Q Consensus 84 fs~erA~~~L~~L~~igpR~~gS~~~~~a~~yL~~~l~~ig~~~~~~~~vevd~f~~~~g~~~~~g~~~~~~~~~y~~~~ 163 (706)
-+.....+.|+.| ++||..||++++++++||.++|+++| .++++|.|+..... ..+.+..
T Consensus 8 d~~~~~~~~l~~i--l~PR~~gs~~~~~~~~~i~~~l~~~g------~~v~~~~f~~~~~~------------~~~~~~~ 67 (312)
T 4f9u_A 8 DDEVHFNRTLDSI--LVPRVVGSRGHQQVREYLVQSLNGLG------FQTEVDEFKQRVPV------------FGELTFA 67 (312)
T ss_dssp CCHHHHHHHHHHH--CSCCCTTSHHHHHHHHHHHHHHHHTT------CEEEEEEEEEEETT------------TEEEEEE
T ss_pred CHHHHHHHHHHHh--cCCCCCCCHHHHHHHHHHHHHHHHCC------CeEEEEeEEEecCC------------CCceeEE
Confidence 3556666677777 47999999999999999999999998 46777776653110 0123678
Q ss_pred eEEEEEcCCCCCCCCCCeEEEeecccccC-----CCCCCCCChhHHHHHHHHHHHHHhc-----CCCCCCcEEEEEeCCC
Q 005255 164 HIVLRILPKYASEAGENAILVSSHIDTVS-----AGEGAGDCSSCVAVMLELARVMSQW-----AHEFKNAVIFLFNTGE 233 (706)
Q Consensus 164 NVi~~i~g~~~~~~~~~~Vll~aH~DSv~-----~~pGA~Dd~sgva~~LE~ar~L~~~-----~~~p~~~I~flf~~~E 233 (706)
|||++++|+ +++.|+++|||||++ ..+||+||++|||+|||+||.|.+. +.+|+|+|+|+|+++|
T Consensus 68 Nii~~~~~~-----~~~~vvl~aHyDs~~~~~~~~~~GA~DnaSGvA~lLElAR~l~~~~~~~~~~~p~~tI~fv~fdaE 142 (312)
T 4f9u_A 68 NVVGTINPQ-----AQNFLALACHYDSKYFPNDPGFVGATDSAVPCAILLNTAKTLGAYLQKEFRNRSDVGLMLIFFDGE 142 (312)
T ss_dssp EEEEEESTT-----SSEEEEEEEECCCCCCTTCTTCCCTTTTHHHHHHHHHHHHHTHHHHTTGGGSCSSEEEEEEEESCC
T ss_pred EEEEEECCC-----CCceEEEEEEEecCCCCCCCCCCCccCCcccHHHHHHHHHHHHHHHHhhccCCCCceEEEEEecCc
Confidence 999999985 457899999999985 3589999999999999999999762 4579999999999999
Q ss_pred CCC--------CcChHHHHhcCCcc-------------CCceEEEEeecCcCCCCccccc-cCCC---HHHHH---HHHH
Q 005255 234 EEG--------LNGAHSFVTQHPWS-------------TTIRVAVDLEAMGIGGRSALFQ-AGPN---LWAVE---NFAA 285 (706)
Q Consensus 234 E~g--------l~GS~~f~~~~~~~-------------~~v~a~iNLD~~G~gg~~~lfq-~g~~---~~li~---~y~~ 285 (706)
|.| +.||++|++++++. +++.+++|+|++|..++..... .+.. +.+.+ ...+
T Consensus 143 E~G~~~~~~~~L~GS~~~a~~~~~~~~~~~~~~~~~~~~~i~~~inlDmvg~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 222 (312)
T 4f9u_A 143 EAFKEWTDADSVYGSKHLAAKLASKRSGSQAQLAPRNIDRIEVLVLLDLIGARNPKFSSFYENTDGLHSSLVQIEKSLRT 222 (312)
T ss_dssp SCSSSCSSSSSCHHHHHHHHHHHHCBC-------CBGGGGEEEEEEEESCCSSSCCEEECCGGGHHHHHHHHHHHHHHHH
T ss_pred cccccCCccccccChHHHHHHHHhhccccccccccccccceeeeeeeeccccCCCCceEEEeccchhhhHHHHHHHHHHH
Confidence 988 89999999876431 4688999999999877654311 1111 11111 1222
Q ss_pred HccCCCCcccccccccCCCCCCCCchHHHhhcCCCeEEEEEeecCCCCCCCcCCCcCCCCHHHHHHHHHHHHHHHHHHhc
Q 005255 286 VAKYPSGQIIGQDLFASGVFETATDFQVYTEVAGLSGLDFAYTDKSAVYHTKNDRLDLLKPGSLQHLGENMLDFLLQTAS 365 (706)
Q Consensus 286 ~a~~p~~~~l~~e~f~~g~ips~TD~~~F~~~~GiPgld~a~~~~~~~YHT~~Dt~d~id~~sLq~~g~~~l~ll~~la~ 365 (706)
....+............+ ..+|||.+|.+ .|||++++...+..++|||+.||+|++|+++|+++++.+..++.+...
T Consensus 223 ~~~~~~~~~~~~~~~~~~--~~~SDH~pF~~-~GIP~l~~~~~~~~~~yHt~~Dt~d~id~~~l~~~~~i~~~fv~e~l~ 299 (312)
T 4f9u_A 223 AGQLEGNNNMFLSRVSGG--LVDDDHRPFLD-ENVPVLHLVATPFPDVWHTPRDNAANLHWPSIRNFNRVFRNFVYQYLK 299 (312)
T ss_dssp TTCSSSSCCCEEEEECSS--CCCCTTHHHHT-TTCCEEEEECSSCCTTTTSTTCSGGGCCHHHHHHHHHHHHHHHHHHHH
T ss_pred hccccccccccccccCCC--CCCCchHHHHH-CCCCEEEEECCCCCCCCCCCccChhhCCHHHHHHHHHHHHHHHHHHHh
Confidence 111111111111111112 24689999998 899999999888888899999999999999999999999999998887
Q ss_pred CCCCCC
Q 005255 366 STSIPK 371 (706)
Q Consensus 366 ~~~l~~ 371 (706)
.+..|.
T Consensus 300 ~~~~P~ 305 (312)
T 4f9u_A 300 RHTSPV 305 (312)
T ss_dssp HCCSCC
T ss_pred CCCCCC
Confidence 766664
No 3
>3tc8_A Leucine aminopeptidase; phosphorylase/hydrolase-like, structural genomics, joint CEN structural genomics, JCSG; 1.06A {Parabacteroides distasonis}
Probab=100.00 E-value=3.1e-36 Score=321.24 Aligned_cols=250 Identities=18% Similarity=0.240 Sum_probs=198.1
Q ss_pred CCCCCHHHHHHHHHHHHcCCCCCCCCHHHHHHHHHHHHHHHhhccccCCcceEEEEeeeccCCCcccccccccCcccccc
Q 005255 81 RRGFSELEAMKHVKALTQLGPHAVGSDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYS 160 (706)
Q Consensus 81 ~~~fs~erA~~~L~~L~~igpR~~gS~~~~~a~~yL~~~l~~ig~~~~~~~~vevd~f~~~~g~~~~~g~~~~~~~~~y~ 160 (706)
..+|+++|++++|++|+++++|..||+++.++++||.++|+++|. ++++|.|.... ..+ .+.
T Consensus 19 ~~~~~~~~~~~~l~~l~~~~~R~~~s~~~~~~~~~l~~~l~~~G~------~v~~~~~~~~~---------~~g---~~~ 80 (309)
T 3tc8_A 19 VPDFNADSAYAYVANQVAFGPRVPNTAAHKACGDYLASELKRFGA------KVYQQEAILTA---------YDG---TKL 80 (309)
T ss_dssp SCCCCHHHHHHHHHHHHHTCCCCTTSHHHHHHHHHHHHHHHHTTC------EEEEEEEEEEC---------TTS---CEE
T ss_pred ccccCHHHHHHHHHHHHccCCCCCCCHHHHHHHHHHHHHHHHCCC------eEEEEEeeccc---------cCC---Ccc
Confidence 468999999999999999999999999999999999999999983 56666655321 001 134
Q ss_pred ccceEEEEEcCCCCCCCCCCeEEEeecccccCCC-------------CCCCCChhHHHHHHHHHHHHHhcCCCCCCcEEE
Q 005255 161 DLNHIVLRILPKYASEAGENAILVSSHIDTVSAG-------------EGAGDCSSCVAVMLELARVMSQWAHEFKNAVIF 227 (706)
Q Consensus 161 ~~~NVi~~i~g~~~~~~~~~~Vll~aH~DSv~~~-------------pGA~Dd~sgva~~LE~ar~L~~~~~~p~~~I~f 227 (706)
+..|||++++|+ +++.|+++||+|||+.+ +||.||++|||++||++|.|.+. +++++|.|
T Consensus 81 ~~~Nvia~~~g~-----~~~~ill~aH~Dsv~~~~~~p~~~~~~~~~~Ga~D~~sGva~~Le~ar~l~~~--~~~~~i~f 153 (309)
T 3tc8_A 81 EARNIIGSFDPE-----NSKRVLLFAHWDSRPYSDHDPDPSKHRTPLDGADDGGSGVGALLEIARQIGQK--APGIGIDI 153 (309)
T ss_dssp EEEEEEEEESTT-----CSSEEEEEEECCCCSCCTTCSSGGGTTSCCCCTTTTHHHHHHHHHHHHHHHHS--CCSSEEEE
T ss_pred cceEEEEEECCC-----CCceEEEEecccCCCCCCCCccccCCCccccCcccchHhHHHHHHHHHHHHhC--CCCCcEEE
Confidence 679999999875 35789999999999876 79999999999999999999986 48999999
Q ss_pred EEeCCCCCCC-------------cChHHHHhcCCc-cCCceEEEEeecCcCCCCccccccCC-C---HHHHHHHHHHccC
Q 005255 228 LFNTGEEEGL-------------NGAHSFVTQHPW-STTIRVAVDLEAMGIGGRSALFQAGP-N---LWAVENFAAVAKY 289 (706)
Q Consensus 228 lf~~~EE~gl-------------~GS~~f~~~~~~-~~~v~a~iNLD~~G~gg~~~lfq~g~-~---~~li~~y~~~a~~ 289 (706)
+|+++||.|+ .||++|+++++. .++++++||+|++|..++..... +. . +.+++.+.+.++.
T Consensus 154 ~~~~~EE~Gl~~~~~~~~~ds~~~GS~~~~~~~~~~~~~~~~~inlD~~G~~~~~~~~~-~~~~~~~~~l~~~~~~~a~~ 232 (309)
T 3tc8_A 154 IFFDAEDYGTPEFVTDYTPDSWCLGTQFWAKNPHVPNYTAEYGILLDMVGGKNATFFKE-QQSLRAAAPIVEMVWSAARD 232 (309)
T ss_dssp EEECSCSCSCCTTCCSCCTTCSCHHHHHHHHSCSSTTCCCSEEEEEESCCBTTCCEEEC-HHHHHHHHHHHHHHHHHHHH
T ss_pred EEECccccccccccccccccccchhHHHHHhCCCccccceEEEEEecccCCCCCceeec-ccccchHHHHHHHHHHHHHH
Confidence 9999999999 999999965443 36899999999999987653222 21 1 2345555443211
Q ss_pred CCCccccccccc---CCCCCCCCchHHHhhcCCCeEEEEEee------cCCCCCCCcCCCcCCCCHHHHHHHHHHHHHHH
Q 005255 290 PSGQIIGQDLFA---SGVFETATDFQVYTEVAGLSGLDFAYT------DKSAVYHTKNDRLDLLKPGSLQHLGENMLDFL 360 (706)
Q Consensus 290 p~~~~l~~e~f~---~g~ips~TD~~~F~~~~GiPgld~a~~------~~~~~YHT~~Dt~d~id~~sLq~~g~~~l~ll 360 (706)
.+. ...|+ .|. ..+||.+|.++.|||+++++.. ...++|||+.||+|++|+++|++.++++++++
T Consensus 233 -~g~---~~~f~~~~~g~--~~sDh~~f~~~~GiP~~~li~~~~~~~~~~~~~~Ht~~Dt~d~id~~~l~~~~~~~~~~v 306 (309)
T 3tc8_A 233 -LGY---GKYFINAAGGA--ITDDHQYVISGRNIPSIDIINYDPESKTGFASYWHTQKDNMENIDRETLKAAGQTVLEVI 306 (309)
T ss_dssp -HTC---TTTEEEEECCC--CCCHHHHHHHHHCCCEEEEEBCCTTSSSSSCTTTTSTTCSGGGBCHHHHHHHHHHHHHHH
T ss_pred -cCC---cceeccCCCCC--CCCccHHHHhcCCCCEEEEecccCcccCCCCCCCCCCcCChhhCCHHHHHHHHHHHHHHH
Confidence 111 11122 122 3699999998679999999865 34578999999999999999999999999998
Q ss_pred HH
Q 005255 361 LQ 362 (706)
Q Consensus 361 ~~ 362 (706)
++
T Consensus 307 y~ 308 (309)
T 3tc8_A 307 YN 308 (309)
T ss_dssp HH
T ss_pred hc
Confidence 75
No 4
>3gux_A Putative Zn-dependent exopeptidase; aminopeptidase, phosphorylase/hydrolase-like fold, structura genomics; 1.80A {Bacteroides vulgatus atcc 8482}
Probab=100.00 E-value=1.8e-35 Score=315.75 Aligned_cols=249 Identities=19% Similarity=0.300 Sum_probs=179.6
Q ss_pred CCCCHHHHHHHHHHHHcCCCCCCCCHHHHHHHHHHHHHHHhhccccCCcceEEEEeeeccCCCcccccccccCccccccc
Q 005255 82 RGFSELEAMKHVKALTQLGPHAVGSDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYSD 161 (706)
Q Consensus 82 ~~fs~erA~~~L~~L~~igpR~~gS~~~~~a~~yL~~~l~~ig~~~~~~~~vevd~f~~~~g~~~~~g~~~~~~~~~y~~ 161 (706)
++|+++|++++|++|+++++|..||+++.++++||.++|+++|. ++++|.+.... +.+ .+.+
T Consensus 22 ~~~~~~~~~~~l~~L~~~~~R~~gs~~~~~~~~~l~~~l~~~G~------~v~~~~~~~~~---------~~g---~~~~ 83 (314)
T 3gux_A 22 PEFDADSAYQYIQVQADFGPRVPNTQAHKECGEYLAGQLEKFGA------KVYNQYADLIA---------YDG---TILK 83 (314)
T ss_dssp CCCCHHHHHHHHHHHHTTCCCCTTSHHHHHHHHHHHHHHHHTTC------EEEEEEEEEEC---------TTS---CEEE
T ss_pred CCCCHHHHHHHHHHHHccCCcCCCCHHHHHHHHHHHHHHHHCCC------EEEEEEeeccc---------cCC---Cccc
Confidence 57999999999999999999999999999999999999999983 56666554321 001 1235
Q ss_pred cceEEEEEcCCCCCCCCCCeEEEeecccccCCC-------------CCCCCChhHHHHHHHHHHHHHhcCCCCCCcEEEE
Q 005255 162 LNHIVLRILPKYASEAGENAILVSSHIDTVSAG-------------EGAGDCSSCVAVMLELARVMSQWAHEFKNAVIFL 228 (706)
Q Consensus 162 ~~NVi~~i~g~~~~~~~~~~Vll~aH~DSv~~~-------------pGA~Dd~sgva~~LE~ar~L~~~~~~p~~~I~fl 228 (706)
..|||++++|+ +++.|+++||||||+.+ +||.||++|||++||++|.|.+. +++++|.|+
T Consensus 84 ~~Nvia~~~g~-----~~~~ill~aH~Dsv~~~~~~p~~~~~~~~~~GA~D~~sGva~~Le~ar~l~~~--~~~~~i~fv 156 (314)
T 3gux_A 84 SRNIIGAYKPE-----SKKRILLCAHWDSRPYADNDPDPKNHHTPILGVNDGASGVGVLLEIARQIQKE--QPALGIDIV 156 (314)
T ss_dssp EEEEEEEESTT-----CSSEEEEEEECCCCC--------------------CHHHHHHHHHHHHHHHHS--CCSSEEEEE
T ss_pred ceEEEEEECCC-----CCceEEEEccccCCCcCCCCcccccCCcccCCCcccHHHHHHHHHHHHHHHhC--CCCCcEEEE
Confidence 79999999875 35789999999999865 79999999999999999999986 489999999
Q ss_pred EeCCCCCCC--------------cChHHHHhcCCc-cCCceEEEEeecCcCCCCccccccCCC----HHHHHHHHHHccC
Q 005255 229 FNTGEEEGL--------------NGAHSFVTQHPW-STTIRVAVDLEAMGIGGRSALFQAGPN----LWAVENFAAVAKY 289 (706)
Q Consensus 229 f~~~EE~gl--------------~GS~~f~~~~~~-~~~v~a~iNLD~~G~gg~~~lfq~g~~----~~li~~y~~~a~~ 289 (706)
++++||.|+ .||++|+++++. ..+++++||+||+|..++.. +..+.. +++.+.+.+.++.
T Consensus 157 ~~~~EE~Gl~~~~~~~~~~ds~~~GS~~~~~~~~~~~~~~~~~inlDm~G~~~~~~-~~~g~~~~~~~~l~~~~~~~~~~ 235 (314)
T 3gux_A 157 FFDSEDYGIPEFYDGKYKQDTWCLGSQYWARTPHVQNYNARYGILLDMVGGKDATF-YYEGYSARTARSEMKKIWKKAHE 235 (314)
T ss_dssp EECSCCC-----------CTTSCHHHHHHHHSCSSTTCCCSEEEEEESCCBTTCCE-EECTTHHHHCHHHHHHHHHHHHH
T ss_pred EECCccccccccccccccccccchhHHHHHhCCcccccceeEEEEEeccCCCCCce-eeeccccccHHHHHHHHHHHHHH
Confidence 999999999 999999965443 36899999999999987653 444442 3556665543321
Q ss_pred CCCccccccccc---CCCCCCCCchHHHhhcCCCeEEEEEeecC-------CCCCCCcCCCcCCCCHHHHHHHHHHHHHH
Q 005255 290 PSGQIIGQDLFA---SGVFETATDFQVYTEVAGLSGLDFAYTDK-------SAVYHTKNDRLDLLKPGSLQHLGENMLDF 359 (706)
Q Consensus 290 p~~~~l~~e~f~---~g~ips~TD~~~F~~~~GiPgld~a~~~~-------~~~YHT~~Dt~d~id~~sLq~~g~~~l~l 359 (706)
.+. ...|+ .+. ..+||.+|.+..|||++++....+ .++|||+.||+|+||+++|++.+++++.+
T Consensus 236 -~g~---~~~f~~~~~~~--~~sDh~pF~~~~GiP~l~~i~~~~~~~~~~f~~~~Ht~~Dt~d~id~~~l~~~~~~~~~~ 309 (314)
T 3gux_A 236 -LGY---GKYFVKEDGGE--TVDDHIYVNKLARIPCVDIINYDAGNPQSSFGSFWHTVNDTMENIDRNTLKAVGQTVMDV 309 (314)
T ss_dssp -HTC---TTTEEEEECCC--CCCHHHHHHHHSCCCEEEEEBCC--------------------CBCHHHHHHHHHHHHHH
T ss_pred -cCC---ccccccccCCC--CCCccHHHHhcCCCceEEEecccccccccCCCCCCCCCcCcchhCCHHHHHHHHHHHHHH
Confidence 111 01121 122 369999999857999999986532 36899999999999999999999999999
Q ss_pred HHH
Q 005255 360 LLQ 362 (706)
Q Consensus 360 l~~ 362 (706)
+++
T Consensus 310 ~y~ 312 (314)
T 3gux_A 310 IYN 312 (314)
T ss_dssp HHT
T ss_pred Hhh
Confidence 875
No 5
>4fai_A CG5976, isoform B; alpha/beta hydrolase, PGlu formation, PE, alzheimer'S diseas pyroglutamate, PGlu-amyloid, transferase, hydrolase; HET: PBD; 1.65A {Drosophila melanogaster} PDB: 4fbe_A*
Probab=100.00 E-value=9.5e-36 Score=320.27 Aligned_cols=253 Identities=21% Similarity=0.232 Sum_probs=186.5
Q ss_pred CCHHHHHHHHHHHHcCCCCCCCCHHHHHHHHHHHHHHHhhccccCCcceEEEEeeeccCCCcccccccccCccccccccc
Q 005255 84 FSELEAMKHVKALTQLGPHAVGSDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYSDLN 163 (706)
Q Consensus 84 fs~erA~~~L~~L~~igpR~~gS~~~~~a~~yL~~~l~~ig~~~~~~~~vevd~f~~~~g~~~~~g~~~~~~~~~y~~~~ 163 (706)
-+.++..+.|+.| ++||+.||++++++++||.++|+++| .+++.|.|...... ..+.+..
T Consensus 35 ~~~~~~~~~l~~i--l~pR~~Gs~~~~~~~~~i~~~l~~~g------~~v~~q~f~~~~~~------------~~~~~~~ 94 (330)
T 4fai_A 35 SDKLHLREAIDKI--LIPRVVGTTNHSIVREYIVQSLRDLD------WDVEVNSFHDHAPI------------KGKLHFH 94 (330)
T ss_dssp CCHHHHHHHHHHH--CSCCCTTSHHHHHHHHHHHHHHHHTT------CEEEEEEEEEEETT------------TEEEEEE
T ss_pred cHHHHHHHHHHhh--cCCCCCCCHHHHHHHHHHHHHHHHCC------CEEEEeeeeeecCC------------CCceeEE
Confidence 3556666666666 57999999999999999999999998 46777776653110 0123678
Q ss_pred eEEEEEcCCCCCCCCCCeEEEeecccccCC----CCCCCCChhHHHHHHHHHHHHHh---cCCCCCCcEEEEEeCCCCCC
Q 005255 164 HIVLRILPKYASEAGENAILVSSHIDTVSA----GEGAGDCSSCVAVMLELARVMSQ---WAHEFKNAVIFLFNTGEEEG 236 (706)
Q Consensus 164 NVi~~i~g~~~~~~~~~~Vll~aH~DSv~~----~pGA~Dd~sgva~~LE~ar~L~~---~~~~p~~~I~flf~~~EE~g 236 (706)
|||++++|+ .++.|+++|||||++. .+||+||++|||+|||+||.|.+ .+.+|+++|+|+|+++||.|
T Consensus 95 Nii~~~~~~-----~~~~i~l~aHyDs~~~~~~~~~GA~DnasG~A~lLE~Ar~l~~~~~~~~~p~rtI~fv~fdgEE~G 169 (330)
T 4fai_A 95 NIIATLNPN-----AERYLVLSCHYDSKYMPGVEFLGATDSAVPCAMLLNLAQVLQEQLKPLKKSKLSLMLLFFDGEEAF 169 (330)
T ss_dssp EEEEESCTT-----CSEEEEEEEECCCCCCTTSCCCCTTTTHHHHHHHHHHHHHTHHHHGGGGTSSEEEEEEEESCCSCS
T ss_pred EEEEEECCC-----CCcEEEEEEeecccccccCCCCCCCCccHhHHHHHHHHHHHHHhhhccCCCCccEEEEEecccccc
Confidence 999999875 4578999999999864 48999999999999999999976 34579999999999999999
Q ss_pred C--------cChHHHHhcC---CccCCceEEEEeecCcCCCCccccccCCCHHHHHHHH----HHc------cCCC---C
Q 005255 237 L--------NGAHSFVTQH---PWSTTIRVAVDLEAMGIGGRSALFQAGPNLWAVENFA----AVA------KYPS---G 292 (706)
Q Consensus 237 l--------~GS~~f~~~~---~~~~~v~a~iNLD~~G~gg~~~lfq~g~~~~li~~y~----~~a------~~p~---~ 292 (706)
+ .||++|+++. .+.+++.++||+||+|.+++.......+..+...... +.. ..+. .
T Consensus 170 l~~~~~~~llGS~~~a~~~~~~~~~~~i~~~inlDmiG~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (330)
T 4fai_A 170 EEWGPKDSIYGARHLAKKWHHEGKLDRIDMLVLLDLLGAPDPAFYSFFENTESWYMRIQSVETRLAKLQLLERYASSGVA 249 (330)
T ss_dssp SSCBTTBSCHHHHHHHHHHHHTTCSTTEEEEEEECSCSSSSCCEEECCGGGHHHHHHHHHHHHHHHHTTC----------
T ss_pred ccccccchhhhhHHHHhcchhccchhceeEEEEeccCccCCCCceeeccCcchHHHHHHHHHHHhhhhhhhhhhhccccc
Confidence 5 7999999753 2457899999999999987765433222222211111 110 0000 0
Q ss_pred cccccccccC---CCCCCCCchHHHhhcCCCeEEEEEeecCCCCCCCcCCCcCCCCHHHHHHHHHHHHHHHHH
Q 005255 293 QIIGQDLFAS---GVFETATDFQVYTEVAGLSGLDFAYTDKSAVYHTKNDRLDLLKPGSLQHLGENMLDFLLQ 362 (706)
Q Consensus 293 ~~l~~e~f~~---g~ips~TD~~~F~~~~GiPgld~a~~~~~~~YHT~~Dt~d~id~~sLq~~g~~~l~ll~~ 362 (706)
.......|.. .....+|||.+|.+ .|||++++...+.+++|||+.||+|+||+++++++++.+..++.+
T Consensus 250 ~~~~~~~~~~~~~~~~~~~SDH~pF~~-~GIP~l~~i~~~~~~~yHT~~Dt~d~iD~~tl~~~~~ii~~Fv~E 321 (330)
T 4fai_A 250 QRDPTRYFQSQAMRSSFIEDDHIPFLR-RNVPILHLIPVPFPSVWHTPDDNASVIDYATTDNLALIIRLFALE 321 (330)
T ss_dssp -----CCEEEEEETTCCCCSTTHHHHT-TTCCEEEECCSSCCTTTTSTTSSGGGCCHHHHHHHHHHHHHHHHH
T ss_pred cccccccccccCCCCCCCCCchHHHHH-CCCCEEEEECCCCCCCCCCCcCChhhCCHHHHHHHHHHHHHHHHH
Confidence 0000111111 00123689999999 899999998777788999999999999999999999999888875
No 6
>3pb6_X Glutaminyl-peptide cyclotransferase-like protein; alpha/beta protein, alpha/beta-mixed fold, glutaminyl cyclas membrane; 1.05A {Homo sapiens} PDB: 3pb4_X 3pb7_X* 3pb8_X* 3pb9_X*
Probab=100.00 E-value=1.5e-34 Score=310.33 Aligned_cols=262 Identities=19% Similarity=0.207 Sum_probs=197.7
Q ss_pred CCcccccC--CCCCCHHHHHH-HHHHHHcCCCCCCCCHHHHHHHHHHHHHHHhhccccCCcceEEEEeeeccCCCccccc
Q 005255 73 PLTAEQAG--RRGFSELEAMK-HVKALTQLGPHAVGSDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGT 149 (706)
Q Consensus 73 ~~~~~~a~--~~~fs~erA~~-~L~~L~~igpR~~gS~~~~~a~~yL~~~l~~ig~~~~~~~~vevd~f~~~~g~~~~~g 149 (706)
+++.++.. +.+|+.+|+++ +|+.+ +++|..||+++.++++||.+++++++. ..++++|.|..+..
T Consensus 23 ~l~~~~~~~~~~~~~~~~~~~~~L~~~--~~~R~~gS~~~~~a~~~l~~~l~~~~~----g~~v~~d~f~~~~~------ 90 (330)
T 3pb6_X 23 SLPEARLRRVVGQLDPQRLWSTYLRPL--LVVRTPGSPGNLQVRKFLEATLRSLTA----GWHVELDPFTASTP------ 90 (330)
T ss_dssp CCCHHHHHHHHHTCCHHHHHHHTTGGG--CSCCCTTSHHHHHHHHHHHHHHHHSTT----CCEEEEEEEEEEET------
T ss_pred CCCHHHHHhhcccCCHHHHHHHHHHHH--hCCCCCCCHHHHHHHHHHHHHHHHhCC----CCeEEEEeeecccc------
Confidence 55443332 35799999998 68888 789999999999999999999999952 14677776654210
Q ss_pred ccccCccccccccceEEEEEcCCCCCCCCCCeEEEeecccccCC------CCCCCCChhHHHHHHHHHHHHHhc-----C
Q 005255 150 GVFKGKTLIYSDLNHIVLRILPKYASEAGENAILVSSHIDTVSA------GEGAGDCSSCVAVMLELARVMSQW-----A 218 (706)
Q Consensus 150 ~~~~~~~~~y~~~~NVi~~i~g~~~~~~~~~~Vll~aH~DSv~~------~pGA~Dd~sgva~~LE~ar~L~~~-----~ 218 (706)
+ .+.+..|||++++|+ .++.|+++|||||++. .+||+||++|||++||++|.|.+. +
T Consensus 91 --~-----g~~~~~Nvia~~~g~-----~~~~ivl~aH~Dsv~~~~g~~~~~GA~D~asGva~lLe~ar~l~~~~~~~~~ 158 (330)
T 3pb6_X 91 --L-----GPVDFGNVVATLDPR-----AARHLTLACHYDSKLFPPGSTPFVGATDSAVPCALLLELAQALDLELSRAKK 158 (330)
T ss_dssp --T-----EEEEEEEEEEESCTT-----SSEEEEEEEECCCCCCCTTSCCCCCTTTTHHHHHHHHHHHHHTHHHHHHHHH
T ss_pred --c-----CCccceEEEEEECCC-----CCceEEEEeccCCCCCCCCCcCcCCCcCChHHHHHHHHHHHHHHHHHhhccc
Confidence 0 124679999999875 3478999999999863 389999999999999999999873 3
Q ss_pred CCCCCcEEEEEeCCCCC--------CCcChHHHHhcCC---------ccCCceEEEEeecCcCCCCccccccCCCHHHHH
Q 005255 219 HEFKNAVIFLFNTGEEE--------GLNGAHSFVTQHP---------WSTTIRVAVDLEAMGIGGRSALFQAGPNLWAVE 281 (706)
Q Consensus 219 ~~p~~~I~flf~~~EE~--------gl~GS~~f~~~~~---------~~~~v~a~iNLD~~G~gg~~~lfq~g~~~~li~ 281 (706)
.+|+++|.|+|+++||. |+.||++|+++.. ..++++++||+||+|..++.....-+...++.+
T Consensus 159 ~~~~~~i~fv~~~~EE~f~~w~~~~gl~GS~~~a~~~~~~~~~~~~~~~~~i~~~inlDmiG~~~~~~~~~~~~t~~~~~ 238 (330)
T 3pb6_X 159 QAAPVTLQLLFLDGEEALKEWGPKDSLYGSRHLAQLMESIPHSPGPTRIQAIELFMLLDLLGAPNPTFYSHFPRTVRWFH 238 (330)
T ss_dssp TTCSEEEEEEEESCCSCSSCCSTTSSCHHHHHHHHHHHHSBCSSCSBTTTTEEEEEEEESCSSSSCCBCCCCGGGHHHHH
T ss_pred CCCCCcEEEEEEcCcccccccCCCCCCccHHHHHHHHHhcCCccccchhhCeEEEEeccCCCCCCCCceeecCcchHHHH
Confidence 57899999999999999 9999999996521 357899999999999987654211111223222
Q ss_pred HHHH---Hc---c----CCCCcccccccccC--CCCCCCCchHHHhhcCCCeEEEEEeecCCCCCCCcCCCcCCCCHHHH
Q 005255 282 NFAA---VA---K----YPSGQIIGQDLFAS--GVFETATDFQVYTEVAGLSGLDFAYTDKSAVYHTKNDRLDLLKPGSL 349 (706)
Q Consensus 282 ~y~~---~a---~----~p~~~~l~~e~f~~--g~ips~TD~~~F~~~~GiPgld~a~~~~~~~YHT~~Dt~d~id~~sL 349 (706)
.+.+ .. . +|.. ...|.. .....+|||.+|.+ .|||++++......++|||+.||+|+||.+++
T Consensus 239 ~l~~i~~~~~~~g~~~~~p~~----~~~f~~~~~~~~~~SDH~pF~~-~GIP~~~~~~~~f~~~yHt~~Dt~d~id~~~l 313 (330)
T 3pb6_X 239 RLRSIEKRLHRLNLLQSHPQE----VMYFQPGEPFGSVEDDHIPFLR-RGVPVLHLISTPFPAVWHTPADTEVNLHPPTV 313 (330)
T ss_dssp HHHHHHHHHHHTTCCSSCCSS----CSSBCSSCSSCCCSCTTHHHHT-TTCCEEEEECSSCCTTTTSTTCSGGGSCHHHH
T ss_pred HHHHHHHHHHHcCccccCCcc----cccccccccCCCCCCchHhHHH-CCCCEEEEEcCCCCCCCCCCcCchhhCCHHHH
Confidence 2221 11 1 1211 112210 01135799999999 99999999876666789999999999999999
Q ss_pred HHHHHHHHHHHHHH
Q 005255 350 QHLGENMLDFLLQT 363 (706)
Q Consensus 350 q~~g~~~l~ll~~l 363 (706)
++.++.+..++.+.
T Consensus 314 ~~~~~i~~~fv~Ey 327 (330)
T 3pb6_X 314 HNLCRILAVFLAEY 327 (330)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 99999999998874
No 7
>2afw_A Glutaminyl-peptide cyclotransferase; alpha-beta protein, metalloprotein; HET: AHN; 1.56A {Homo sapiens} SCOP: c.56.5.8 PDB: 2afo_A 2afm_A* 2afx_A* 2afz_A 3pbb_A* 2zed_A 2zeh_A 2afu_A 2zee_A 2zeo_A 2zef_A 2zem_A 2zel_A 2zen_A 3pbe_A 2zeg_A 2zep_A 2afs_A 3si0_A* 3si2_A* ...
Probab=100.00 E-value=9.6e-33 Score=296.67 Aligned_cols=269 Identities=20% Similarity=0.243 Sum_probs=199.0
Q ss_pred cccCCCCCcccccC--CCCCCHHHH-HHHHHHHHcCCCCCCCCHHHHHHHHHHHHHHHh--hccccCCcceEEEEeeecc
Q 005255 67 YEHMPPPLTAEQAG--RRGFSELEA-MKHVKALTQLGPHAVGSDALDRALQYVLAASQK--IKESKHWEADVEVDFFHAK 141 (706)
Q Consensus 67 ~~~lP~~~~~~~a~--~~~fs~erA-~~~L~~L~~igpR~~gS~~~~~a~~yL~~~l~~--ig~~~~~~~~vevd~f~~~ 141 (706)
.+++|.+++.++.+ +.+++.+|+ .++|++| +++|..+|++++++++||.++|++ .| .++++|.+...
T Consensus 9 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~L--~~~r~~~s~~~~~~~~~l~~~l~~~~~G------~~v~~~~~~~~ 80 (329)
T 2afw_A 9 NYHQPAILNSSALRQIAEGTSISEMWQNDLQPL--LIERYPGSPGSYAARQHIMQRIQRLQAD------WVLEIDTFLSQ 80 (329)
T ss_dssp HHCCCCCCCHHHHHHHHHHCCHHHHHHHTTGGG--CSCCCTTSHHHHHHHHHHHHHHHTSSSC------CEEEEEEEEEC
T ss_pred cccCCCCCChHHHHHhhhhcCHHHHHHHHHHHH--cCCCCCCCHHHHHHHHHHHHHHHhhCCC------CEEEEEEEEec
Confidence 45578777654433 356999999 8999999 679999999999999999999999 55 46777765542
Q ss_pred CCCcccccccccCccccccccceEEEEEcCCCCCCCCCCeEEEeecccccCCC-------CCCCCChhHHHHHHHHHHHH
Q 005255 142 SGANRVGTGVFKGKTLIYSDLNHIVLRILPKYASEAGENAILVSSHIDTVSAG-------EGAGDCSSCVAVMLELARVM 214 (706)
Q Consensus 142 ~g~~~~~g~~~~~~~~~y~~~~NVi~~i~g~~~~~~~~~~Vll~aH~DSv~~~-------pGA~Dd~sgva~~LE~ar~L 214 (706)
.. ..+.+..|||++++|+ +++.|+++||||||+.+ +||.||++|||++||++|.|
T Consensus 81 ~~-------------~g~~~~~Nvi~~~~g~-----~~~~i~l~aH~Dsv~~~~~~~~~~~Ga~D~~sGva~~le~ar~l 142 (329)
T 2afw_A 81 TP-------------YGYRSFSNIISTLNPT-----AKRHLVLACHYDSKYFSHWNNRVFVGATDSAVPCAMMLELARAL 142 (329)
T ss_dssp CT-------------TSSEEEEEEEEESSTT-----SSEEEEEEEECCCCCCCCBTTBCCCCTTTTHHHHHHHHHHHHHT
T ss_pred CC-------------CCCceEeEEEEEECCC-----CCcEEEEEEeccCCCcCcccCcCCCCcccchhhHHHHHHHHHHH
Confidence 10 0123579999999874 46789999999999865 89999999999999999999
Q ss_pred Hhc--------CCCCCCcEEEEEeCCCCC--------CCcChHHHHhcCC------------ccCCceEEEEeecCcCCC
Q 005255 215 SQW--------AHEFKNAVIFLFNTGEEE--------GLNGAHSFVTQHP------------WSTTIRVAVDLEAMGIGG 266 (706)
Q Consensus 215 ~~~--------~~~p~~~I~flf~~~EE~--------gl~GS~~f~~~~~------------~~~~v~a~iNLD~~G~gg 266 (706)
.+. +.+|+++|+|+|+++||. |+.||++|++++. ..+++.++||+|++|.++
T Consensus 143 ~~~~~~~~~~~g~~~~~~i~~~~~~~EE~~~~~~~~~gl~Gs~~~~~~~~~~~~p~~~~~~~~~~~i~~~inlD~iG~~~ 222 (329)
T 2afw_A 143 DKKLLSLKTVSDSKPDLSLQLIFFDGEEAFLHWSPQDSLYGSRHLAAKMASTPHPPGARGTSQLHGMDLLVLLDLIGAPN 222 (329)
T ss_dssp HHHHHTTC------CCEEEEEEEESCCSCSSSCCSSSSCHHHHHHHHHHHTSBSSTTCSSCBTTTTEEEEEEECSCCSSS
T ss_pred HHHHhhhcccccCCCCccEEEEEecCcccccccCCCccchhHHHHHHHHHhCCCcccccccccccceEEEEEeccCCCCC
Confidence 875 357899999999999998 8999999997642 246799999999999877
Q ss_pred Cccc--cccCCCHHHHH---HHHHHc---cCCCCcccccccccCCC--CCCCCchHHHhhcCCCeEEEEEeecCCCCCCC
Q 005255 267 RSAL--FQAGPNLWAVE---NFAAVA---KYPSGQIIGQDLFASGV--FETATDFQVYTEVAGLSGLDFAYTDKSAVYHT 336 (706)
Q Consensus 267 ~~~l--fq~g~~~~li~---~y~~~a---~~p~~~~l~~e~f~~g~--ips~TD~~~F~~~~GiPgld~a~~~~~~~YHT 336 (706)
+... +.. ..+ +.+ ...+.. ............|.... -..+|||.+|.+ .|||++++......++|||
T Consensus 223 ~~~~~~~~~-~~~-~~~~l~~~~~~~~~~g~~~~~~~~~~~f~~~~~~g~~~sDh~~F~~-~GiP~~~~~~~~~~~~yHt 299 (329)
T 2afw_A 223 PTFPNFFPN-SAR-WFERLQAIEHELHELGLLKDHSLEGRYFQNYSYGGVIQDDHIPFLR-RGVPVLHLIPSPFPEVWHT 299 (329)
T ss_dssp CCBCCCCGG-GHH-HHHHHHHHHHHHHHTTCSSSCCSTTCSBCSCCCCSCCCSTTHHHHT-TTCCEEEECCSSCCTTTTS
T ss_pred CceeeeccC-cch-HHHHHHHHHHHHHHcCCccCCCcccccccccccCCCCCCCCHhHHH-CCCCEEEEEcCCCCCCCCC
Confidence 6432 221 112 222 111111 10000011111222111 124699999999 7999999988777789999
Q ss_pred cCCCcCCCCHHHHHHHHHHHHHHHHHHh
Q 005255 337 KNDRLDLLKPGSLQHLGENMLDFLLQTA 364 (706)
Q Consensus 337 ~~Dt~d~id~~sLq~~g~~~l~ll~~la 364 (706)
++||++++|+++++++++.+..++.+..
T Consensus 300 ~~Dt~~~ld~~~l~~~~~~~~~~v~eyl 327 (329)
T 2afw_A 300 MDDNEENLDESTIDNLNKILQVFVLEYL 327 (329)
T ss_dssp TTCSSTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred CCCchhhCCHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999888887653
No 8
>1tkj_A Aminopeptidase, SGAP; double-zinc metalloproteinase, calcium activation, protein- inhibitor complex, hydrolase; HET: MED; 1.15A {Streptomyces griseus} SCOP: c.56.5.4 PDB: 1f2o_A 1f2p_A* 1cp7_A 1qq9_A* 1tf9_A* 1tf8_A* 1tkh_A* 1tkf_A* 1xbu_A* 1xjo_A
Probab=100.00 E-value=2.5e-32 Score=287.41 Aligned_cols=255 Identities=16% Similarity=0.203 Sum_probs=197.7
Q ss_pred CCCCHHHHHHHHHHHHcC-----CCCCCCCHHHHHHHHHHHHHHHhhccccCCcceEEEEeeeccCCCcccccccccCcc
Q 005255 82 RGFSELEAMKHVKALTQL-----GPHAVGSDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKT 156 (706)
Q Consensus 82 ~~fs~erA~~~L~~L~~i-----gpR~~gS~~~~~a~~yL~~~l~~ig~~~~~~~~vevd~f~~~~g~~~~~g~~~~~~~ 156 (706)
.+++.++++++|++|+++ ++|..+++++.++++||.++++++|. +++++.+...
T Consensus 2 ~~i~~~~~~~~l~~L~~i~s~s~~~r~~~~~~e~~~~~~i~~~l~~~g~------~v~~~~~~~~--------------- 60 (284)
T 1tkj_A 2 PDIPLANVKAHLTQLSTIAANNGGNRAHGRPGYKASVDYVKAKLDAAGY------TTTLQQFTSG--------------- 60 (284)
T ss_dssp CCCCHHHHHHHHHHHHHHHHTTTTCCCTTSHHHHHHHHHHHHHHHHHTC------EEEEEEEEET---------------
T ss_pred CcCCHHHHHHHHHHHHcccccCCCCCCCCCHHHHHHHHHHHHHHHHcCC------eEEEEEeccC---------------
Confidence 367899999999999875 36788898999999999999999983 4555543211
Q ss_pred ccccccceEEEEEcCCCCCCCCCCeEEEeecccccCCCCCCCCChhHHHHHHHHHHHHHhcCCCCCCcEEEEEeCCCCCC
Q 005255 157 LIYSDLNHIVLRILPKYASEAGENAILVSSHIDTVSAGEGAGDCSSCVAVMLELARVMSQWAHEFKNAVIFLFNTGEEEG 236 (706)
Q Consensus 157 ~~y~~~~NVi~~i~g~~~~~~~~~~Vll~aH~DSv~~~pGA~Dd~sgva~~LE~ar~L~~~~~~p~~~I~flf~~~EE~g 236 (706)
..+..||+++++|+ .+++.|+++||+|+|+.++||.||++|+|++||++|.|.+.+.+++++|+|+|+++||.|
T Consensus 61 --~~~~~nvi~~~~g~----~~~~~i~l~aH~D~v~~g~Ga~D~~~g~a~~l~~~~~l~~~~~~~~~~i~~~~~~~EE~g 134 (284)
T 1tkj_A 61 --GATGYNLIANWPGG----DPNKVLMAGAHLDSVSSGAGINDNGSGSAAVLETALAVSRAGYQPDKHLRFAWWGAEELG 134 (284)
T ss_dssp --TEEEEEEEEECSCS----EEEEEEEEEEECCCCTTSCCTTTTHHHHHHHHHHHHHHHHTTCCCSEEEEEEEESCGGGT
T ss_pred --CCCceeEEEEEeCC----CCCCEEEEEeecCCCCCCCCCccChHHHHHHHHHHHHHHhcCCCCCceEEEEEECCcccC
Confidence 01357999999874 134789999999999999999999999999999999999887789999999999999999
Q ss_pred CcChHHHHhcCCc--cCCceEEEEeecCcCCCCccccccCCCHHHHHHHHHHccCCCCcccccccccCCCCCCCCchHHH
Q 005255 237 LNGAHSFVTQHPW--STTIRVAVDLEAMGIGGRSALFQAGPNLWAVENFAAVAKYPSGQIIGQDLFASGVFETATDFQVY 314 (706)
Q Consensus 237 l~GS~~f~~~~~~--~~~v~a~iNLD~~G~gg~~~lfq~g~~~~li~~y~~~a~~p~~~~l~~e~f~~g~ips~TD~~~F 314 (706)
+.||+.++++++. .+++.++||+|+.|.++....+. +.++.+.+.+.+.++. .+.. .+... ....+|||.+|
T Consensus 135 ~~Gs~~~~~~~~~~~~~~~~~~i~~D~~g~~~~~~~~~-~~~~~l~~~~~~~~~~-~gi~--~~~~~--~~~~~sD~~~f 208 (284)
T 1tkj_A 135 LIGSKFYVNNLPSADRSKLAGYLNFDMIGSPNPGYFVY-DDDPVIEKTFKNYFAG-LNVP--TEIET--EGDGRSDHAPF 208 (284)
T ss_dssp SHHHHHHHHHSCHHHHTTEEEEEEECCCCCSSCCCEEC-CSSHHHHHHHHHHHHH-HTCC--CEECC--SSTTCSTHHHH
T ss_pred CcCHHHHHhhCccchhhcEEEEEEecCCCCCCCCeEEe-cCCHHHHHHHHHHHHH-cCCC--cccCC--CCCCCCchHHH
Confidence 9999999988764 36899999999999876444333 3456555544433211 1110 01111 11357999999
Q ss_pred hhcCCCeEEEEEeec-------------------CCCCCCCcCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCC
Q 005255 315 TEVAGLSGLDFAYTD-------------------KSAVYHTKNDRLDLLKPGSLQHLGENMLDFLLQTASSTSIP 370 (706)
Q Consensus 315 ~~~~GiPgld~a~~~-------------------~~~~YHT~~Dt~d~id~~sLq~~g~~~l~ll~~la~~~~l~ 370 (706)
.+ .|||++.+.... ..++|||+.||++++|.+.+++.++.+..+++.|++++.+|
T Consensus 209 ~~-~Gip~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~yHt~~D~~~~id~~~l~~~~~~~~~~~~~la~~~~~P 282 (284)
T 1tkj_A 209 KN-VGVPVGGLFTGAGYTKSAAQAQKWGGTAGQAFDRCYHSSCDSLSNINDTALDRNSDAAAHAIWTLSSGTGEP 282 (284)
T ss_dssp HH-TTCCEEEEECCCSSBCCHHHHHHHCSCTTSBSCTTTTSTTCSTTSCCHHHHHHHHHHHHHHHHHHHC-----
T ss_pred HH-CCCCEEEeecCcccccccchhhccccccccCCCCCCCCCcCChhhCCHHHHHHHHHHHHHHHHHHhcCCCCC
Confidence 98 999999987641 14679999999999999999999999999999999998776
No 9
>1rtq_A Bacterial leucyl aminopeptidase; bimetallic, zinc, high resolution, hydrolase; 0.95A {Vibrio proteolyticus} SCOP: c.56.5.4 PDB: 1txr_A* 1xry_A* 2dea_A 2nyq_A 3fh4_A 3vh9_A* 1lok_A 1cp6_A 1ft7_A* 1igb_A* 1amp_A 2iq6_A 2prq_A 3b3v_A 3b3w_A 3b7i_A* 3b3t_A 3b35_A 3b3c_A* 3b3s_A ...
Probab=99.97 E-value=1.6e-30 Score=275.45 Aligned_cols=262 Identities=18% Similarity=0.218 Sum_probs=196.7
Q ss_pred CCCCHHHHHHHHHHHHcCCCCCCCCHHHHHHHHHHHHHHHhhccccCCcceEEEEeeeccCCCcccccccccCccccccc
Q 005255 82 RGFSELEAMKHVKALTQLGPHAVGSDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYSD 161 (706)
Q Consensus 82 ~~fs~erA~~~L~~L~~igpR~~gS~~~~~a~~yL~~~l~~ig~~~~~~~~vevd~f~~~~g~~~~~g~~~~~~~~~y~~ 161 (706)
.+++.++++++|++|+++++|..+|+++.++++||.+++++++.... .++++.+... ..+
T Consensus 15 ~~~~~~~~~~~l~~L~~i~sr~~~s~~~~~~~~~l~~~l~~~g~~~~---~~~~~~~~~~-----------------~~~ 74 (299)
T 1rtq_A 15 PQVDASQITGTISSLESFTNRFYTTTSGAQASDWIASEWQALSASLP---NASVKQVSHS-----------------GYN 74 (299)
T ss_dssp GGCCHHHHHHHHHHHHTSSCCCTTSHHHHHHHHHHHHHHHHHHTTST---TEEEEEEEET-----------------TEE
T ss_pred HhcCHHHHHHHHHHHhCcCCCCCCCchHHHHHHHHHHHHHHhcCCcc---cceeeeeccC-----------------CCC
Confidence 57899999999999999998999999989999999999999874211 2444433211 014
Q ss_pred cceEEEEEcCCCCCCCCCCeEEEeecccccCC--------CCCCCCChhHHHHHHHHHHHHHhcCCCCCCcEEEEEeCCC
Q 005255 162 LNHIVLRILPKYASEAGENAILVSSHIDTVSA--------GEGAGDCSSCVAVMLELARVMSQWAHEFKNAVIFLFNTGE 233 (706)
Q Consensus 162 ~~NVi~~i~g~~~~~~~~~~Vll~aH~DSv~~--------~pGA~Dd~sgva~~LE~ar~L~~~~~~p~~~I~flf~~~E 233 (706)
..||+++++|+ +.+++.|+++||+|||+. ++||.||++|+|++||++|.|.+.+.+++++|+|+|+++|
T Consensus 75 ~~nvi~~~~g~---~~~~~~v~l~aH~D~v~~~~~~~~~~~~Ga~D~~~g~a~~l~~~~~l~~~~~~~~~~i~~~~~~~E 151 (299)
T 1rtq_A 75 QKSVVMTITGS---EAPDEWIVIGGHLDSTIGSHTNEQSVAPGADDDASGIAAVTEVIRVLSENNFQPKRSIAFMAYAAE 151 (299)
T ss_dssp EEEEEEEECCS---SEEEEEEEEEEECCCCSSTTCCTTCCCCCTTTTHHHHHHHHHHHHHHHHTTCCCSEEEEEEEESCG
T ss_pred CceEEEEEECC---CCCCCEEEEEeccccCCCcCcCCCcccCCCcccHHHHHHHHHHHHHHHHcCCCCCceEEEEEECCc
Confidence 58999999875 123578999999999973 7999999999999999999999887789999999999999
Q ss_pred CCCCcChHHHHhcCCc-cCCceEEEEeecCcCCCCc--cccccC-CCHHHHHHHHHHccCCCCcccccccccCCCCCCCC
Q 005255 234 EEGLNGAHSFVTQHPW-STTIRVAVDLEAMGIGGRS--ALFQAG-PNLWAVENFAAVAKYPSGQIIGQDLFASGVFETAT 309 (706)
Q Consensus 234 E~gl~GS~~f~~~~~~-~~~v~a~iNLD~~G~gg~~--~lfq~g-~~~~li~~y~~~a~~p~~~~l~~e~f~~g~ips~T 309 (706)
|.|+.||+.++++++. .+++.++||+|+.|..|.. ..+... .++.+.+...+.++. ....+... +.. ....+|
T Consensus 152 E~g~~Gs~~~~~~~~~~~~~~~~~i~~D~~g~~g~~~~i~~~~~~~~~~l~~~l~~~a~~-~~~~i~~~-~~~-~~~~~s 228 (299)
T 1rtq_A 152 EVGLRGSQDLANQYKSEGKNVVSALQLDMTNYKGSAQDVVFITDYTDSNFTQYLTQLMDE-YLPSLTYG-FDT-CGYACS 228 (299)
T ss_dssp GGTSHHHHHHHHHHHHTTCEEEEEEECSCCSCCCSSSSEEEECTTSCHHHHHHHHHHHHH-HCTTCCEE-EEC-CSSCCS
T ss_pred cCCchhHHHHHHhhhhccccEEEEEEecCCCCCCCCcceEEEeCCCCchHHHHHHHHHHH-hCccCCcc-cCC-CCCCCC
Confidence 9999999999977653 4678999999999875432 233322 245443333222110 00001111 111 112579
Q ss_pred chHHHhhcCCCeEEEEEe---ecCCCCCCCcCCCcCCCCH--HHHHHHHHHHHHHHHHHhcCCCCC
Q 005255 310 DFQVYTEVAGLSGLDFAY---TDKSAVYHTKNDRLDLLKP--GSLQHLGENMLDFLLQTASSTSIP 370 (706)
Q Consensus 310 D~~~F~~~~GiPgld~a~---~~~~~~YHT~~Dt~d~id~--~sLq~~g~~~l~ll~~la~~~~l~ 370 (706)
||.+|.+ .|||++.+.. .+..++|||+.||++++|+ ..++++++.+.+++++|++++.+.
T Consensus 229 D~~~f~~-~GiP~~~~~~~~~~~~~~~yHt~~Dt~~~~d~~~~~~~~~~~l~~~~~~~La~~~~~~ 293 (299)
T 1rtq_A 229 DHASWHN-AGYPAAMPFESKFNDYNPRIHTTQDTLANSDPTGSHAKKFTQLGLAYAIEMGSATGDT 293 (299)
T ss_dssp THHHHHH-TTCCEECEESSCGGGSCTTTTSTTCCGGGSCTTCHHHHHHHHHHHHHHHHHHHCCC--
T ss_pred cHHHHHH-CCCCEEEecccccccCCCCCCCccccccccCccHHHHHHHHHHHHHHHHHHhCCCcCC
Confidence 9999998 9999987643 2244689999999999998 688999999999999999988754
No 10
>3kas_A Transferrin receptor protein 1; transferrin receptor 1, arenavirus, cell MEMB disulfide bond, endocytosis, HOST-virus inter receptor, secreted, transmembrane; HET: NAG FUC BMA MAN; 2.40A {Homo sapiens} PDB: 1de4_C* 3s9l_A* 3s9m_A* 3s9n_A* 1cx8_A* 1suv_A 2nsu_A
Probab=99.96 E-value=6.4e-30 Score=295.27 Aligned_cols=209 Identities=17% Similarity=0.183 Sum_probs=175.0
Q ss_pred cccceEEEEEcCCCCCCCCCCeEEEeecccccCCCCCCCCChhHHHHHHHHHHHHHhc----CCCCCCcEEEEEeCCCCC
Q 005255 160 SDLNHIVLRILPKYASEAGENAILVSSHIDTVSAGEGAGDCSSCVAVMLELARVMSQW----AHEFKNAVIFLFNTGEEE 235 (706)
Q Consensus 160 ~~~~NVi~~i~g~~~~~~~~~~Vll~aH~DSv~~~pGA~Dd~sgva~~LE~ar~L~~~----~~~p~~~I~flf~~~EE~ 235 (706)
.+..|||++++|+ +.+++.|+++||+||| ++||.||++|+|++||++|.|.+. +++|+|+|+|++|++||.
T Consensus 264 ~~~~NVi~~i~G~---~~~~~~vvvgaH~Ds~--~~Ga~D~~sG~a~lLe~ar~l~~~~~~~g~~p~r~I~f~~~~~EE~ 338 (640)
T 3kas_A 264 IKILNIFGVIKGF---VEPDHYVVVGAQRDAW--GPGAAKSGVGTALLLKLAQMFSDMVLKDGFQPSRSIIFASWSAGDF 338 (640)
T ss_dssp EEEEEEEEEECCS---SEEEEEEEEEEECCCS--SCCTTTTHHHHHHHHHHHHHHHHHHHTSCCCCSEEEEEEEESSGGG
T ss_pred eeEEEEEEEEeCC---cCCCCceeeecccCCC--CCCCCcCcHHHHHHHHHHHHHHHhhhhcCCCCCCcEEEEEECCccc
Confidence 4678999999986 2356899999999999 599999999999999999999864 678999999999999999
Q ss_pred CCcChHHHHhcCC-c-cCCceEEEEeecCcCCCCccccccCC-CHHHHHHHHHHccCCCC-cccccc-ccc--CCCCCCC
Q 005255 236 GLNGAHSFVTQHP-W-STTIRVAVDLEAMGIGGRSALFQAGP-NLWAVENFAAVAKYPSG-QIIGQD-LFA--SGVFETA 308 (706)
Q Consensus 236 gl~GS~~f~~~~~-~-~~~v~a~iNLD~~G~gg~~~lfq~g~-~~~li~~y~~~a~~p~~-~~l~~e-~f~--~g~ips~ 308 (706)
|+.||++|+++|. + .+++.++||+|++|.|++...++++| ..++++.+.+.+++|.+ .++.++ .|. .+.++++
T Consensus 339 gl~GS~~~~~~~~~~l~~~~~a~iNlD~~~~G~~~l~~~~~p~l~~l~~~~~~~v~~P~~~~tl~~~~~w~~~~~~~~~~ 418 (640)
T 3kas_A 339 GSVGATEWLEGYLSSLHLKAFTYINLDKAVLGTSNFKVSASPLLYTLIEKTMQNVKHPVTGQFLYQDSNWASKVEKLTLD 418 (640)
T ss_dssp TSHHHHHHHHHTTTTGGGTEEEEEECTTCBSCSSEEEEEECGGGHHHHHHHHTTCBCTTTCSBSCCCTTGGGGCCCCCTT
T ss_pred CchhHHHHHHhhhhhhhhCEEEEEecccCccCCCceEEEeCHHHHHHHHHHHHhCCCCCCCCceecccccccccCCCCCC
Confidence 9999999998884 3 48999999999999877666677555 35677777777788875 334332 232 4678899
Q ss_pred CchHHHhhcCCCeEEEEEeecC-CC-CCCCcCCCcCCCCH------HHHHHHHHHHHHHHHHHhcCCCCCCCC
Q 005255 309 TDFQVYTEVAGLSGLDFAYTDK-SA-VYHTKNDRLDLLKP------GSLQHLGENMLDFLLQTASSTSIPKGN 373 (706)
Q Consensus 309 TD~~~F~~~~GiPgld~a~~~~-~~-~YHT~~Dt~d~id~------~sLq~~g~~~l~ll~~la~~~~l~~~~ 373 (706)
|||.+|.++.|||++++++..+ .+ +|||.+||+++++. ..++.+++.+..++.+|++++.+|.+.
T Consensus 419 sD~~~F~~~~GIP~~~~~~~~~~~y~~yHT~~Dt~~~i~~~~~~~~~~h~~~a~~~g~l~l~La~~~~lP~~~ 491 (640)
T 3kas_A 419 NAAFPFLAYSGIPAVSFCFCEDTDYPYLGTTMDTYKELIERIPELNKVARAAAEVAGQFVIKLTHDVELNLDY 491 (640)
T ss_dssp STHHHHHHHHCCCEEEEEEECSSCCTTTTSTTCCHHHHHHHCTTHHHHHHHHHHHHHHHHHHHHHSSSCCCCT
T ss_pred cchHHHHHhCCCCeeeccccCCCCCCCcCCccccHHHHHhhcCcHHHHHHHHHHHHHHHHHHHhcCCCCCCCH
Confidence 9999999889999999999865 34 59999999998764 567888999999999999999999754
No 11
>2ek8_A Aminopeptidase; metalloproteinase, hydrolase; 1.80A {Aneurinibacillus SP} PDB: 2ek9_A*
Probab=99.96 E-value=9.7e-28 Score=265.89 Aligned_cols=198 Identities=22% Similarity=0.265 Sum_probs=154.7
Q ss_pred cceEEEEEcCCCCCCCCCCeEEEeecccccCCCCCCCCChhHHHHHHHHHHHHHhcCCCCCCcEEEEEeCCCCCCCcChH
Q 005255 162 LNHIVLRILPKYASEAGENAILVSSHIDTVSAGEGAGDCSSCVAVMLELARVMSQWAHEFKNAVIFLFNTGEEEGLNGAH 241 (706)
Q Consensus 162 ~~NVi~~i~g~~~~~~~~~~Vll~aH~DSv~~~pGA~Dd~sgva~~LE~ar~L~~~~~~p~~~I~flf~~~EE~gl~GS~ 241 (706)
..||+++++|+.....+++.|+++||+|||+.+|||.||++|++++||++|.|.+. +++++|+|+++++||.|+.||+
T Consensus 203 ~~Nvi~~~~g~~~~~~~~~~v~~~aH~D~v~~g~Ga~D~~~G~a~~le~~~~l~~~--~~~~~i~~~~~~~EE~g~~Gs~ 280 (421)
T 2ek8_A 203 SHNVIATKKPDANKKNTNDIIIIGSHHDSVEKAPGANDDASGVAVTLELARVMSKL--KTDTELRFITFGAEENGLIGSK 280 (421)
T ss_dssp EEEEEEEECCCSSTTCCCCEEEEEEECCCCTTCCCTTTTHHHHHHHHHHHHHHTTS--CCSSEEEEEEESSSTTTSHHHH
T ss_pred ccceEEEecCcccCCCCCCEEEEecccccCCCCCCCCCCcHhHHHHHHHHHHHhcc--CCCceEEEEEECCccccchhHH
Confidence 57999999885210125689999999999999999999999999999999999874 6789999999999999999999
Q ss_pred HHHhcCC--ccCCceEEEEeecCcCCCCcc-ccccCC-CHHHHHHH----HHHccCCCCcccccccccCCCCCCCCchHH
Q 005255 242 SFVTQHP--WSTTIRVAVDLEAMGIGGRSA-LFQAGP-NLWAVENF----AAVAKYPSGQIIGQDLFASGVFETATDFQV 313 (706)
Q Consensus 242 ~f~~~~~--~~~~v~a~iNLD~~G~gg~~~-lfq~g~-~~~li~~y----~~~a~~p~~~~l~~e~f~~g~ips~TD~~~ 313 (706)
.|+++++ +.+++.++||+|++|.++... ....+. .+.+...+ .+....| . .. ....+|||.+
T Consensus 281 ~~~~~~~~~~~~~~~~~in~D~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~--~---~~-----~~~~~SD~~~ 350 (421)
T 2ek8_A 281 KYAASLSEDEIKRTIGMFQLDMVGSKDAGDLIMYTIDGKKNRVTDLGAAASSRLSGV--L---PY-----GQEGRSDHES 350 (421)
T ss_dssp HHHTTCCHHHHHHEEEEEEECSCCBTTSCEEEEEETTSCCCHHHHHHHHHHHHHTSC--C---CE-----EECCSSTHHH
T ss_pred HHHHhCccchhhcEEEEEEecccCCCCCcceEEecCCCccccchhhHHHHHHhcCCC--C---CC-----CCCCCCccHH
Confidence 9998765 356799999999999876522 222221 11122221 1111222 0 01 1135799999
Q ss_pred HhhcCCCeEEEEEeecCCCCCCCcCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCCCCC
Q 005255 314 YTEVAGLSGLDFAYTDKSAVYHTKNDRLDLLKPGSLQHLGENMLDFLLQTASSTSIPKG 372 (706)
Q Consensus 314 F~~~~GiPgld~a~~~~~~~YHT~~Dt~d~id~~sLq~~g~~~l~ll~~la~~~~l~~~ 372 (706)
|.+ .|||++.+......++|||++||+|+++.+.++++++.+..++++|++.+.+|.+
T Consensus 351 F~~-~GIP~~~~~~~~~~~~yHt~~Dt~~~i~~~~l~~~~~~~~~~~~~la~~~~~p~~ 408 (421)
T 2ek8_A 351 FHA-LGIPAALFIHAPVEPWYHTPNDTLDKISKEKLDNVADIVGSAVYQAARPGELVIE 408 (421)
T ss_dssp HHT-TTCCEEEEEEESCCTTTTSTTCCGGGBCHHHHHHHHHHHHHHHHHHHSSSCCCCC
T ss_pred HHH-CCCCEEEEECCcCCCCCCCcccchhhCCHHHHHHHHHHHHHHHHHHhCCCccCCC
Confidence 998 9999998765555568999999999999999999999999999999999988754
No 12
>3fed_A Glutamate carboxypeptidase III; metallopeptidase, bimetallic active site, N-glycosylation, C cation, chloride anion, zinc IONS, dipept glycoprotein; HET: NAG BIX; 1.29A {Homo sapiens} PDB: 3fec_A* 3fee_A* 3ff3_A* 2c6c_A* 2c6g_A* 2c6p_A* 2cij_A* 2jbj_A* 2jbk_A* 3rbu_A* 3bi1_A* 2oot_A* 2pvv_A* 2pvw_A* 2xei_A* 2or4_A* 3bi0_A* 3bhx_A* 3d7d_A* 3d7f_A* ...
Probab=99.95 E-value=8e-29 Score=288.74 Aligned_cols=209 Identities=19% Similarity=0.236 Sum_probs=172.7
Q ss_pred ccccceEEEEEcCCCCCCCCCCeEEEeecccccCCCCCCCCChhHHHHHHHHHHHHHh---cCCCCCCcEEEEEeCCCCC
Q 005255 159 YSDLNHIVLRILPKYASEAGENAILVSSHIDTVSAGEGAGDCSSCVAVMLELARVMSQ---WAHEFKNAVIFLFNTGEEE 235 (706)
Q Consensus 159 y~~~~NVi~~i~g~~~~~~~~~~Vll~aH~DSv~~~pGA~Dd~sgva~~LE~ar~L~~---~~~~p~~~I~flf~~~EE~ 235 (706)
..+..|||++++|+ +.+++.|+++||+|||+ +||.||++|+|++||++|.|.+ .+++|+|+|+|++|++||.
T Consensus 309 ~~~~~NVi~~i~G~---~~~~~~vllgaH~Ds~~--~Ga~D~~sG~a~lLe~ar~l~~~~~~g~~p~r~I~f~~~~~EE~ 383 (707)
T 3fed_A 309 ITRIYNVVGTIRGS---VEPDRYVILGGHRDSWV--FGAIDPTSGVAVLQEIARSFGKLMSKGWRPRRTIIFASWDAEEF 383 (707)
T ss_dssp EEEEEEEEEEECCS---SEEEEEEEEEEECCCSS--SCTTTTHHHHHHHHHHHHHHHHHHHTTCCCSEEEEEEEESCGGG
T ss_pred EEEEEEEEEEEeCC---CCCCceEEEeccccCCC--CCCccCcHHHHHHHHHHHHHHhhhhccCCCCCCEEEEEeCCccc
Confidence 35789999999986 23578999999999997 7999999999999999999987 4678999999999999999
Q ss_pred CCcChHHHHhcCC--ccCCceEEEEeecCcCCCCccccccCC-CHHHHHHHHHHccCCCC----ccccccccc-------
Q 005255 236 GLNGAHSFVTQHP--WSTTIRVAVDLEAMGIGGRSALFQAGP-NLWAVENFAAVAKYPSG----QIIGQDLFA------- 301 (706)
Q Consensus 236 gl~GS~~f~~~~~--~~~~v~a~iNLD~~G~gg~~~lfq~g~-~~~li~~y~~~a~~p~~----~~l~~e~f~------- 301 (706)
|+.||++|+++|+ +.+++.++||+|++|.++....++++| ..+++..+.+.+++|.+ .++.+..++
T Consensus 384 Gl~GS~~~~~~~~~~~~~~~~a~iNlD~~~~g~~~~~~~~sp~l~~~i~~~~~~v~~P~~~~~~~tly~~w~~~~~~~~~ 463 (707)
T 3fed_A 384 GLLGSTEWAEENVKILQERSIAYINSDSSIEGNYTLRVDCTPLLYQLVYKLTKEIPSPDDGFESKSLYESWLEKDPSPEN 463 (707)
T ss_dssp TSHHHHHHHHHHHHHHHHHEEEEEECSCSBSCSSEEEEEECGGGHHHHHHHHTTSBCCSTTCTTSBHHHHHHHHSEETTE
T ss_pred cchhHHHHHHhcchhhhhCEEEEEEecccccCCceEEEecCHHHHHHHHHHHhcCCCCccccccccHHHHHHhhcccccc
Confidence 9999999998875 467899999999999887666677555 35677777777788875 334332222
Q ss_pred -----CCCCCCCCchHHHhhcCCCeEEEEEeecC-------CC-CCCCcCCCcCCCCH------HHHHHHHHHHHHHHHH
Q 005255 302 -----SGVFETATDFQVYTEVAGLSGLDFAYTDK-------SA-VYHTKNDRLDLLKP------GSLQHLGENMLDFLLQ 362 (706)
Q Consensus 302 -----~g~ips~TD~~~F~~~~GiPgld~a~~~~-------~~-~YHT~~Dt~d~id~------~sLq~~g~~~l~ll~~ 362 (706)
.+.+.++|||.+|.++.|||+++++|..+ .| +|||.+||+++++. ...+.+++....++.+
T Consensus 464 ~~~p~i~~lgsgSD~~~F~~~~GIPs~~~~f~~~~~~~~~~~y~~YHT~~Dt~~~~~~~~Dp~f~~h~~~a~~~g~l~l~ 543 (707)
T 3fed_A 464 KNLPRINKLGSGSDFEAYFQRLGIASGRARYTKNKKTDKYSSYPVYHTIYETFELVEKFYDPTFKKQLSVAQLRGALVYE 543 (707)
T ss_dssp EEEECEECCCSSSTTHHHHHTTCCCEEEEEEECCTTTCCSSSCTTTTSTTCCHHHHHHHTCTTCHHHHHHHHHHHHHHHH
T ss_pred cCCcccccCCCCCChHHHHHhCCcceeccccccCccccccCCCCCcCCCcccHHHHHHhcCchHHHHHHHHHHHHHHHHH
Confidence 12345889999999989999999999854 33 79999999987644 5666789999999999
Q ss_pred HhcCCCCCCC
Q 005255 363 TASSTSIPKG 372 (706)
Q Consensus 363 la~~~~l~~~ 372 (706)
||+++.+|.+
T Consensus 544 La~~~vlP~~ 553 (707)
T 3fed_A 544 LVDSKIIPFN 553 (707)
T ss_dssp HHHCSSCCCC
T ss_pred HhCCccCCCC
Confidence 9999999864
No 13
>3iib_A Peptidase M28; YP_926796.1, structural genomics, J center for structural genomics, JCSG, protein structure INI PSI-2; HET: PGE; 1.70A {Shewanella amazonensis SB2B}
Probab=99.95 E-value=9.7e-28 Score=267.69 Aligned_cols=200 Identities=18% Similarity=0.202 Sum_probs=159.4
Q ss_pred cccceEEEEEcCCCCCCCCCCeEEEeecccccCCCCCCCCChhHHHHHHHHHHHHHhcCCCCCCcEEEEEeCCCCCCCcC
Q 005255 160 SDLNHIVLRILPKYASEAGENAILVSSHIDTVSAGEGAGDCSSCVAVMLELARVMSQWAHEFKNAVIFLFNTGEEEGLNG 239 (706)
Q Consensus 160 ~~~~NVi~~i~g~~~~~~~~~~Vll~aH~DSv~~~pGA~Dd~sgva~~LE~ar~L~~~~~~p~~~I~flf~~~EE~gl~G 239 (706)
.+..||+++++|+ +.+++.|+++||+|||+.++||.||++|++++||++|.|.+.+.+|+|+|+|+|+++||.|+.|
T Consensus 233 ~~~~Nvi~~~~g~---~~~~~~i~~~aH~Ds~~~g~Ga~D~~sG~a~~le~a~~l~~~~~~~~~~i~f~~~~~EE~gl~G 309 (444)
T 3iib_A 233 TTSYNVIAEVKGS---TKADEIVLIGAHLDSWDEGTGAIDDGAGVAIVTAAAKHILDLPQKPERTIRVVLYAAEELGLLG 309 (444)
T ss_dssp EEEEEEEEEECCS---TEEEEEEEEEEECCCCSSSCCTTTTHHHHHHHHHHHHHHHTSSSCCSEEEEEEEESCGGGTSHH
T ss_pred ceeEEEEEEEeCC---CCCCCEEEEEeecccCCCCCCCccchHHHHHHHHHHHHHHhcCCCCCCeEEEEEECCcccCCcC
Confidence 3679999999986 2356889999999999999999999999999999999999988889999999999999999999
Q ss_pred hHHHHhcCCc-cCCceEEEEeecCcCCCCccccccCC-CHHHHHHHHHHccCCCCcccccccccCCCCCCCCchHHHhhc
Q 005255 240 AHSFVTQHPW-STTIRVAVDLEAMGIGGRSALFQAGP-NLWAVENFAAVAKYPSGQIIGQDLFASGVFETATDFQVYTEV 317 (706)
Q Consensus 240 S~~f~~~~~~-~~~v~a~iNLD~~G~gg~~~lfq~g~-~~~li~~y~~~a~~p~~~~l~~e~f~~g~ips~TD~~~F~~~ 317 (706)
|++|+++++. .+++.+++|+|+.|.......++.++ ...+++.+.+.. .+.+... + ......+|||.+|.+
T Consensus 310 s~~~~~~~~~~~~~~~~~~n~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~--~---~~~~~~~SD~~~f~~- 382 (444)
T 3iib_A 310 GKTYAKEHEAELEKHYIAAESDFGAGPIYQIDWRVADTAHSPVINAMKVA-EPLGVAA--G---NNKASGGPDVSMLPA- 382 (444)
T ss_dssp HHHHHHHTGGGGGGEEEEEECCSTTCCEEEEEEECCHHHHHHHHHHGGGG-GGGTCEE--C---CSCCCCCGGGTTSGG-
T ss_pred HHHHHHhhHhhhhceeEEEECcCCCCcceEEEeecChhhHHHHHHHHHHH-hhcCCcc--c---cCCCCCCCccHHHHH-
Confidence 9999988753 36789999999876432222223222 235556555532 2333211 1 122356899999998
Q ss_pred CCCeEEEEEeecC--CCCCCCcCCCcCCCCHHHHHHHHHHHHHHHHHHhcCCCC
Q 005255 318 AGLSGLDFAYTDK--SAVYHTKNDRLDLLKPGSLQHLGENMLDFLLQTASSTSI 369 (706)
Q Consensus 318 ~GiPgld~a~~~~--~~~YHT~~Dt~d~id~~sLq~~g~~~l~ll~~la~~~~l 369 (706)
.|||++++..... .++|||++||+|++|++.|++.++.+..+++.+|++++.
T Consensus 383 ~GiP~~~l~~~~~~~~~~yHt~~Dt~d~id~~~l~~~~~~~~~~v~~lA~~~~~ 436 (444)
T 3iib_A 383 LGVPVASLRQDGSDYFDYHHTPNDTLDKINPEALAQNVAVYAQFAWVMANSKVE 436 (444)
T ss_dssp GTCCEEEEEECCTTGGGTTTSTTCCGGGSCHHHHHHHHHHHHHHHHHHHHCCCC
T ss_pred CCCCEEEeecCCCcCCCCCCCCccccccCCHHHHHHHHHHHHHHHHHHhcCCCC
Confidence 8999999976433 248999999999999999999999999999999998764
No 14
>3k9t_A Putative peptidase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2, aminop hydrolase; 2.37A {Clostridium acetobutylicum}
Probab=99.85 E-value=2.5e-20 Score=202.02 Aligned_cols=179 Identities=19% Similarity=0.197 Sum_probs=135.4
Q ss_pred EcCCCCCCCCCCeEEEeecccccCCCCCCCCChhHHHHHHHHHHHHHhcCCCCCCcEEEEEeCCCCCCCcChHHHHhcCC
Q 005255 169 ILPKYASEAGENAILVSSHIDTVSAGEGAGDCSSCVAVMLELARVMSQWAHEFKNAVIFLFNTGEEEGLNGAHSFVTQHP 248 (706)
Q Consensus 169 i~g~~~~~~~~~~Vll~aH~DSv~~~pGA~Dd~sgva~~LE~ar~L~~~~~~p~~~I~flf~~~EE~gl~GS~~f~~~~~ 248 (706)
++|+ +++.|+++||+|+.. +|+||+||+|+++|++|.|++. +++++++|+|++ |..||..|+++|+
T Consensus 174 ipG~-----t~~~IllsaH~cHP~---~ANDNaSG~a~lleLar~l~~~--~~~~t~rFvf~p----g~iGS~~yl~~~~ 239 (435)
T 3k9t_A 174 IRGE-----LEEEILLTTYTCHPS---MCNDNLSGVALITFIAKALSKL--KTKYSYRFLFAP----ETIGSITWLSRNE 239 (435)
T ss_dssp ECCS-----SSCEEEEEEECCCCS---CTTTTHHHHHHHHHHHHHHTTS--CCSSEEEEEEEC----TTHHHHHHHHHCG
T ss_pred ecCC-----CCCEEEEEEEcCCCC---CCCccchHHHHHHHHHHHHhcC--CCCceEEEEEcC----ccHHHHHHHHhCh
Confidence 4774 458899999999853 6999999999999999999863 589999999998 6899999998886
Q ss_pred c-cCCceEEEEeecCcCCCCccccccCCCHHHHHHHHH-HccCCCCcccccccccCCCCCCCCchHHHhhcCC--CeEEE
Q 005255 249 W-STTIRVAVDLEAMGIGGRSALFQAGPNLWAVENFAA-VAKYPSGQIIGQDLFASGVFETATDFQVYTEVAG--LSGLD 324 (706)
Q Consensus 249 ~-~~~v~a~iNLD~~G~gg~~~lfq~g~~~~li~~y~~-~a~~p~~~~l~~e~f~~g~ips~TD~~~F~~~~G--iPgld 324 (706)
. .+++++.+|+||+|.++......+...+++++...+ +.++.....-..+ | .+.++||++|.+ .| ||...
T Consensus 240 ~~l~~i~a~lnLDmVGd~~~~~y~~sr~g~~~~d~~~~~vl~~~~~~~~~~~-f----~~~GSDh~qF~s-pG~dIPv~~ 313 (435)
T 3k9t_A 240 DKLKNIKMGLVATCVGDAGIKNYKRTKFGDAEIDKIVEKVLMHCGSEYYVAD-F----FPWGSDERQFSS-PGINLSVGS 313 (435)
T ss_dssp GGGGGEEEEEECCSCCSSSCEEEECCTTSSSHHHHHHHHHHHHSSSCEEEEC-C----CSCSSTHHHHTS-TTTCCCEEE
T ss_pred HhhhceEEEEEEEEecCCCCceeecCCCCChHHHHHHHHHHhhcCCCCceec-C----CCCCCcchhHhh-CCCCCCEEE
Confidence 3 478999999999999875443322112333333322 2222100000111 2 346799999999 88 99999
Q ss_pred EEeecC-CCCCCCcCCCcCCCCHHHHHHHHHHHHHHHHHHhcCC
Q 005255 325 FAYTDK-SAVYHTKNDRLDLLKPGSLQHLGENMLDFLLQTASST 367 (706)
Q Consensus 325 ~a~~~~-~~~YHT~~Dt~d~id~~sLq~~g~~~l~ll~~la~~~ 367 (706)
+.-... .+.|||+.||+|+++++.|+...+.+...+..|-+..
T Consensus 314 ~~r~~~~~peYHTs~Dtld~ISpe~L~~s~~iv~~~i~~Le~n~ 357 (435)
T 3k9t_A 314 LMRSCYGFDGYHTSADNLCYMNKDGLADSYKTYLEVIYTIENNR 357 (435)
T ss_dssp EESSCTTCTTTTBTTSSGGGCCHHHHHHHHHHHHHHHHHHHHCC
T ss_pred EecCCCCCcccCCCcCChhhCCHHHHHHHHHHHHHHHHHhhccc
Confidence 876333 4579999999999999999999999999999887754
No 15
>4h2k_A Succinyl-diaminopimelate desuccinylase; DAPE, MCSG, PSI-biology, structural genomics, midwest center structural genomics, hydrolase; 1.84A {Haemophilus influenzae}
Probab=99.74 E-value=3.8e-17 Score=170.13 Aligned_cols=232 Identities=17% Similarity=0.146 Sum_probs=160.8
Q ss_pred HHHHHHHHHHHcCCCCCCCCHHHHHHHHHHHHHHHhhccccCCcceEEEEeeeccCCCcccccccccCccccccccceEE
Q 005255 87 LEAMKHVKALTQLGPHAVGSDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYSDLNHIV 166 (706)
Q Consensus 87 erA~~~L~~L~~igpR~~gS~~~~~a~~yL~~~l~~ig~~~~~~~~vevd~f~~~~g~~~~~g~~~~~~~~~y~~~~NVi 166 (706)
+++.+.+++|.++ | ..|..+..+.+||.++|+++|. +++.+. . .+..|++
T Consensus 6 ~~~~~~l~~lv~i-p--s~s~~e~~~~~~l~~~l~~~G~------~~~~~~--~-------------------~~~~nv~ 55 (269)
T 4h2k_A 6 EKVVSLAQDLIRR-P--SISPNDEGCQQIIAERLEKLGF------QIEWMP--F-------------------NDTLNLW 55 (269)
T ss_dssp HHHHHHHHHHHTS-C--CBTTCCTTHHHHHHHHHHTTTC------EEEECC--B-------------------TTBCEEE
T ss_pred HHHHHHHHHHhCC-C--CCCCCcHHHHHHHHHHHHHcCC------eEEEEE--c-------------------CCceEEE
Confidence 5778889999886 2 2344445689999999999983 344321 0 1357999
Q ss_pred EEEcCCCCCCCCCCeEEEeecccccCCC---------------------CCCCCChhHHHHHHHHHHHHHhcCCCCCCcE
Q 005255 167 LRILPKYASEAGENAILVSSHIDTVSAG---------------------EGAGDCSSCVAVMLELARVMSQWAHEFKNAV 225 (706)
Q Consensus 167 ~~i~g~~~~~~~~~~Vll~aH~DSv~~~---------------------pGA~Dd~sgva~~LE~ar~L~~~~~~p~~~I 225 (706)
+++ |+ +.+.|++.+|+|+||.+ +|+.||++|++++|++++.|.+.+.+++++|
T Consensus 56 a~~-g~-----~~~~i~l~~H~D~vp~~~~~~w~~~pf~~~~~~g~~~grG~~D~k~g~a~~l~a~~~l~~~~~~~~~~i 129 (269)
T 4h2k_A 56 AKH-GT-----SEPVIAFAGHTDVVPTGDENQWSSPPFSAEIIDGMLYGRGAADMKGSLAAMIVAAEEYVKANPNHKGTI 129 (269)
T ss_dssp EEE-CS-----SSCEEEEEEECCBCCCCCGGGCSSCTTSCCEETTEEESTTTTTTHHHHHHHHHHHHHHHHHCTTCSSEE
T ss_pred EEe-CC-----CCCEEEEEeeecccCCCCcccccCCCCCeEEECCEEEeCCcccChHHHHHHHHHHHHHHHhCCCCCccE
Confidence 988 43 34689999999999853 6999999999999999999998776788999
Q ss_pred EEEEeCCCCCCCc-ChHHHHhcCC-ccCCceEEEEeecCcCC--CCcc-ccccC----C-CHHHHHHHHHHccCCCCccc
Q 005255 226 IFLFNTGEEEGLN-GAHSFVTQHP-WSTTIRVAVDLEAMGIG--GRSA-LFQAG----P-NLWAVENFAAVAKYPSGQII 295 (706)
Q Consensus 226 ~flf~~~EE~gl~-GS~~f~~~~~-~~~~v~a~iNLD~~G~g--g~~~-lfq~g----~-~~~li~~y~~~a~~p~~~~l 295 (706)
+|+|+.+||.|.. ||+.+++... ...+..++|+.|..+.. +... .-+.| + +..+++...++++.-.+..
T Consensus 130 ~~~~~~~EE~g~~~Ga~~~~~~~~~~~~~~d~~i~~Ept~~~~~~~~i~~g~~G~G~~~~~~~l~~~l~~aa~~~~gi~- 208 (269)
T 4h2k_A 130 ALLITSDEEATAKDGTIHVVETLMARDEKITYCMVGEPSSAKNLGDVVKNGRRGGGFLTKPGKLLDSITSAIEETIGIT- 208 (269)
T ss_dssp EEEEESCSSSCCTTSHHHHHHHHHHTTCCCCEEEECCCCBSSSTTSEEECSCTTCC------HHHHHHHHHHHHHHSCC-
T ss_pred EEEEEeccccCcccCHHHHHHHHHhcCCCCCEEEEECCCCCCcCCceeEEecccccccCCCcHHHHHHHHHHHHHhCCC-
Confidence 9999999999984 9999986432 23467899999977532 1111 11111 1 2245555544332101110
Q ss_pred ccccccCCCCCCCCchHHHhhcCCCeEEEEEeecCCCCCCCcCCCcCCCCHHHHHHHHHHHHHHHHHHhc
Q 005255 296 GQDLFASGVFETATDFQVYTEVAGLSGLDFAYTDKSAVYHTKNDRLDLLKPGSLQHLGENMLDFLLQTAS 365 (706)
Q Consensus 296 ~~e~f~~g~ips~TD~~~F~~~~GiPgld~a~~~~~~~YHT~~Dt~d~id~~sLq~~g~~~l~ll~~la~ 365 (706)
...- ....+||.+.+.. .|+|.+.+.-.. .++||+. |.++.+.+++..+.+..+++.+.+
T Consensus 209 -~~~~---~~gggtDa~~~~~-~g~p~~~~~~~~--~~~Hs~~---E~v~~~d~~~~~~ll~~~l~~l~~ 268 (269)
T 4h2k_A 209 -PKAE---TGGGTSDGRFIAL-MGAEVVEFGPLN--STIHKVN---ECVSVEDLGKCGEIYHKMLVNLLD 268 (269)
T ss_dssp -CEEE---CC--CHHHHHHHT-TTCEEEECCSBC--TTTTSTT---CEEEHHHHHHHHHHHHHHHHHHC-
T ss_pred -CEEe---cCCCCchHHHHHh-hCCCEEEEEeCC--CCCcCCc---ccccHHHHHHHHHHHHHHHHHHhh
Confidence 0111 1235799999987 899998874433 4469988 478999999999999999988764
No 16
>3t68_A Succinyl-diaminopimelate desuccinylase; DAPE, csgid, metalloenzyme, structural genomics; 1.65A {Vibrio cholerae o1 biovar el tor} PDB: 3t6m_A
Probab=99.73 E-value=2.1e-17 Score=171.88 Aligned_cols=232 Identities=16% Similarity=0.149 Sum_probs=161.3
Q ss_pred HHHHHHHHHHHcCCCCCCCCHHHHHHHHHHHHHHHhhccccCCcceEEEEeeeccCCCcccccccccCccccccccceEE
Q 005255 87 LEAMKHVKALTQLGPHAVGSDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYSDLNHIV 166 (706)
Q Consensus 87 erA~~~L~~L~~igpR~~gS~~~~~a~~yL~~~l~~ig~~~~~~~~vevd~f~~~~g~~~~~g~~~~~~~~~y~~~~NVi 166 (706)
+++.+.+++|.++ |.+ |..+..+.+||.++|+++|. +++.+. . .+..|++
T Consensus 6 ~~~~~~l~~lv~i-ps~--s~~e~~~~~~l~~~l~~~G~------~~~~~~--~-------------------~~~~nv~ 55 (268)
T 3t68_A 6 SPVLALAKELISR-QSV--TPADAGCQDLMIERLKALGF------EIESMV--F-------------------EDTTNFW 55 (268)
T ss_dssp CHHHHHHHHHHTS-CCB--TTCCTTHHHHHHHHHHHTTC------EECCCE--E-------------------TTEEC-C
T ss_pred HHHHHHHHHHhCC-CCC--CCCchHHHHHHHHHHHHCCC------eEEEEe--c-------------------CCccEEE
Confidence 5788999999986 333 33345689999999999984 232210 0 1347899
Q ss_pred EEEcCCCCCCCCCCeEEEeecccccCCC---------------------CCCCCChhHHHHHHHHHHHHHhcCCCCCCcE
Q 005255 167 LRILPKYASEAGENAILVSSHIDTVSAG---------------------EGAGDCSSCVAVMLELARVMSQWAHEFKNAV 225 (706)
Q Consensus 167 ~~i~g~~~~~~~~~~Vll~aH~DSv~~~---------------------pGA~Dd~sgva~~LE~ar~L~~~~~~p~~~I 225 (706)
+++ |+ +.+.|++.+|+|+||.+ +|+.||++|++++|++++.|.+.+.+++++|
T Consensus 56 a~~-g~-----~~~~i~l~~H~D~vp~~~~~~w~~~pf~~~~~~g~~~g~G~~D~k~g~a~~l~a~~~l~~~~~~~~~~v 129 (268)
T 3t68_A 56 ARR-GT-----QSPLFVFAGHTDVVPAGPLSQWHTPPFEPTVIDGFLHGRGAADMKGSLACMIVAVERFIAEHPDHQGSI 129 (268)
T ss_dssp EEE-CS-----SSCEEEEEEECCBCCCCCGGGCSSCTTSCEEETTEEESTTTTTTHHHHHHHHHHHHHHHHHCTTCSSEE
T ss_pred EEe-CC-----CCCeEEEEccccccCCCCcccCCCCCCccEEECCEEEecCcccchHHHHHHHHHHHHHHHhCCCCCCcE
Confidence 988 43 34689999999999853 6999999999999999999988776788999
Q ss_pred EEEEeCCCCCCC-cChHHHHhcCC-ccCCceEEEEeecCcCC--CCcc-ccccC-----CCHHHHHHHHHHccCCCCccc
Q 005255 226 IFLFNTGEEEGL-NGAHSFVTQHP-WSTTIRVAVDLEAMGIG--GRSA-LFQAG-----PNLWAVENFAAVAKYPSGQII 295 (706)
Q Consensus 226 ~flf~~~EE~gl-~GS~~f~~~~~-~~~~v~a~iNLD~~G~g--g~~~-lfq~g-----~~~~li~~y~~~a~~p~~~~l 295 (706)
+|+|+.+||.|. .||+.++++.. ...+..++|+.|..+.. |... .-+.| .+..+.+...++++...+...
T Consensus 130 ~~~~~~~EE~g~~~Ga~~~~~~~~~~~~~~d~~i~~ept~~~~~~~~i~~g~~G~p~~~~~~~l~~~l~~a~~~~~gi~~ 209 (268)
T 3t68_A 130 GFLITSDEEGPFINGTVRVVETLMARNELIDMCIVGEPSSTLAVGDVVKNGRRGGGFLTDTGELLAAVVAAVEEVNHQAP 209 (268)
T ss_dssp EEEEESCTTSSSCCHHHHHHHHHHHTTCCCCEEEECSCCBSSSTTSEEEECCGGGGTSCCCCHHHHHHHHHHHHHHSSCC
T ss_pred EEEEEeCCccCcccCHHHHHHHHHhcCCCCCEEEEeCCCCCccCCceeEEecCCCcccCCchHHHHHHHHHHHHHhCCCc
Confidence 999999999998 59999986432 23567899999987542 1111 11111 122355555444321111110
Q ss_pred ccccccCCCCCCCCchHHHhhcCCCeEEEEEeecCCCCCCCcCCCcCCCCHHHHHHHHHHHHHHHHHHhc
Q 005255 296 GQDLFASGVFETATDFQVYTEVAGLSGLDFAYTDKSAVYHTKNDRLDLLKPGSLQHLGENMLDFLLQTAS 365 (706)
Q Consensus 296 ~~e~f~~g~ips~TD~~~F~~~~GiPgld~a~~~~~~~YHT~~Dt~d~id~~sLq~~g~~~l~ll~~la~ 365 (706)
+ .- ....+||+..|.+ .|+|++.+.. ...++||+.+ .++.+.+++..+.+.++++.|.+
T Consensus 210 -~-~~---~sgggtD~~~~~~-~g~p~~~~~~--~~~~~Hs~~E---~v~~~d~~~~~~vl~~~l~~l~~ 268 (268)
T 3t68_A 210 -A-LL---TTGGTSDGRFIAQ-MGAQVVELGP--VNATIHKVNE---CVRIADLEKLTDMYQKTLNHLLG 268 (268)
T ss_dssp -E-EE---SSCCCHHHHHHHH-HTCEEEECCS--BCTTTTSTTC---EEEHHHHHHHHHHHHHHHHHHHC
T ss_pred -E-Ee---cCccccHHHHHHh-cCCCEEEEee--CCCCCCCccc---cccHHHHHHHHHHHHHHHHHHhC
Confidence 1 10 1235799999997 8999887643 2235699884 77899999999999999988764
No 17
>1q7l_A Aminoacylase-1; catalysis, enzyme dimerization, site- directed mutagenesis, structure comparison, zinc, hydrolase; 1.40A {Homo sapiens} SCOP: c.56.5.4
Probab=99.66 E-value=1.1e-15 Score=152.20 Aligned_cols=146 Identities=18% Similarity=0.218 Sum_probs=111.8
Q ss_pred CCCHHHHHHHHHHHHcCCCCCCCCHHHHHHHHHHHHHHHhhccccCCcceEEEEeeeccCCCcccccccccCcccccccc
Q 005255 83 GFSELEAMKHVKALTQLGPHAVGSDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYSDL 162 (706)
Q Consensus 83 ~fs~erA~~~L~~L~~igpR~~gS~~~~~a~~yL~~~l~~ig~~~~~~~~vevd~f~~~~g~~~~~g~~~~~~~~~y~~~ 162 (706)
.++.+++.+.+++|.++ |.+.++++++++++|+.+++++++. +++.+... ...
T Consensus 6 ~~~~~~~~~~l~~lv~i-~s~s~~~~e~~~~~~l~~~l~~~g~------~~~~~~~~--------------------~g~ 58 (198)
T 1q7l_A 6 PEEEHPSVTLFRQYLRI-RTVQPKPDYGAAVAFFEETARQLGL------GCQKVEVA--------------------PGY 58 (198)
T ss_dssp -CCCCHHHHHHHHHHTS-CCBTTSCCHHHHHHHHHHHHHHHTC------EEEEEEEE--------------------TTE
T ss_pred chhHHHHHHHHHHHhcC-CCCCCCcCHHHHHHHHHHHHHHCCC------eEEEEEcC--------------------CCC
Confidence 46778899999999997 4444444567899999999999984 44443211 024
Q ss_pred ceEEEEEcCCCCCCCCCCeEEEeecccccCC---------------------CCCCCCChhHHHHHHHHHHHHHhcCCCC
Q 005255 163 NHIVLRILPKYASEAGENAILVSSHIDTVSA---------------------GEGAGDCSSCVAVMLELARVMSQWAHEF 221 (706)
Q Consensus 163 ~NVi~~i~g~~~~~~~~~~Vll~aH~DSv~~---------------------~pGA~Dd~sgva~~LE~ar~L~~~~~~p 221 (706)
.|++++++|+ .++.+.|++.+|+|+||. ++|+.||++|++++|++++.|.+.+.++
T Consensus 59 ~~~i~~~~g~---~~~~~~ill~aH~DtVp~~~~~w~~~pf~~~~~~~g~l~GrGa~D~K~g~a~~l~a~~~l~~~~~~~ 135 (198)
T 1q7l_A 59 VVTVLTWPGT---NPTLSSILLNSHTDVVPVFKEHWSHDPFEAFKDSEGYIYARGAQDMKCVSIQYLEAVRRLKVEGHRF 135 (198)
T ss_dssp EEEEEEECCS---STTSCEEEEEEECCBCCCCGGGCSSCTTTCCBCTTSEEECTTTTTTHHHHHHHHHHHHHHHHTTCCC
T ss_pred eEEEEEEccC---CCCCCeEEEEeeecccCCCcccCccCCCeeeEccCCEEEeCcchhchHHHHHHHHHHHHHHHcCCCC
Confidence 6999999874 223478999999999874 3789999999999999999999987778
Q ss_pred CCcEEEEEeCCCCCC-CcChHHHHhcCCc-cCCceEEEE
Q 005255 222 KNAVIFLFNTGEEEG-LNGAHSFVTQHPW-STTIRVAVD 258 (706)
Q Consensus 222 ~~~I~flf~~~EE~g-l~GS~~f~~~~~~-~~~v~a~iN 258 (706)
+++|+|+|+.+||.| +.|++.+++++.. ..+..++++
T Consensus 136 ~~~v~~~~~~~EE~g~~~Ga~~~~~~~~~~~~~~~~~id 174 (198)
T 1q7l_A 136 PRTIHMTFVPDEEVGGHQGMELFVQRPEFHALRAGFALD 174 (198)
T ss_dssp SSCEEEEEESCGGGTSTTTHHHHTTSHHHHTTCEEEEEE
T ss_pred CCCEEEEEEcccccCccccHHHHHHhHHhccCCcCEEEe
Confidence 999999999999997 7999999854322 123445553
No 18
>1vhe_A Aminopeptidase/glucanase homolog; structural genomics, unknown function; HET: MSE; 1.90A {Bacillus subtilis} SCOP: b.49.3.1 c.56.5.4
Probab=99.64 E-value=2.6e-15 Score=163.44 Aligned_cols=226 Identities=18% Similarity=0.186 Sum_probs=159.2
Q ss_pred HHHHHHHHHHHcCCCCCCCCHHHHHHHHHHHHHHHhhccccCCcceEEEEeeeccCCCcccccccccCccccccccceEE
Q 005255 87 LEAMKHVKALTQLGPHAVGSDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYSDLNHIV 166 (706)
Q Consensus 87 erA~~~L~~L~~igpR~~gS~~~~~a~~yL~~~l~~ig~~~~~~~~vevd~f~~~~g~~~~~g~~~~~~~~~y~~~~NVi 166 (706)
+++.+.|++|+++ |.+.|. ++++++||.+++++++. ++++| +..|++
T Consensus 7 ~~~~~~l~~L~~~-~s~sg~--e~~~~~~l~~~l~~~g~------~~~~d------------------------~~gnli 53 (373)
T 1vhe_A 7 DETLTMLKDLTDA-KGIPGN--EREVRQVMKSYIEPFAD------EVTTD------------------------RLGSLI 53 (373)
T ss_dssp CHHHHHHHHHHHS-CCCTTC--CHHHHHHHHHHHGGGCS------EEEEC------------------------TTCCEE
T ss_pred HHHHHHHHHHHcC-CCCCCc--hHHHHHHHHHHHHhhCC------EEEEc------------------------CCCcEE
Confidence 4678899999997 445444 35789999999999983 34432 246899
Q ss_pred EEEcCCCCCCCCCCeEEEeecccccC------------------------------------------------------
Q 005255 167 LRILPKYASEAGENAILVSSHIDTVS------------------------------------------------------ 192 (706)
Q Consensus 167 ~~i~g~~~~~~~~~~Vll~aH~DSv~------------------------------------------------------ 192 (706)
++++|+ ...+.|++.||+|+|+
T Consensus 54 a~~~g~----~~~~~vll~aH~D~v~~~v~~i~~~G~l~~~~~Gg~~~~~~~~~~v~v~~~~g~~~g~i~~~~~h~~~~~ 129 (373)
T 1vhe_A 54 AKKTGA----ENGPKIMIAGHLDEVGFMVTQITDKGFIRFQTVGGWWAQVMLAQRVTIVTKKGEITGVIGSKPPHILSPE 129 (373)
T ss_dssp EEEESS----TTSCEEEEEEECCCCEEEEEEECTTSCEEEEEESCCCGGGTTTCEEEEEETTEEEEEEEECCCGGGSCTT
T ss_pred EEecCC----CCCceEEEEecCCcCCEEEEEECCCCeEEEEEeCCcchhhccCCEEEEEeCCCcEEEEEcCCCcccCchh
Confidence 998764 1347899999999997
Q ss_pred ---------------------------CCCC---------------------CCCChhHHHHHHHHHHHHHhcCCCCCCc
Q 005255 193 ---------------------------AGEG---------------------AGDCSSCVAVMLELARVMSQWAHEFKNA 224 (706)
Q Consensus 193 ---------------------------~~pG---------------------A~Dd~sgva~~LE~ar~L~~~~~~p~~~ 224 (706)
..+| +.||++|+|++|++++.|.+.+ ++++
T Consensus 130 ~~~~~~~~~~l~id~g~~s~~~~~~~gi~~Gd~v~~~~~~~~~~~~~~i~gr~~D~k~g~a~~l~a~~~l~~~~--~~~~ 207 (373)
T 1vhe_A 130 ARKKSVEIKDMFIDIGASSREEALEWGVLPGDMIVPHFEFTVMNNEKFLLAKAWDNRIGCAIAIDVLRNLQNTD--HPNI 207 (373)
T ss_dssp TTTSCCCGGGCEEECSCSSHHHHHHTTCCTTCEEEECCCCEECSSTTEEEETTHHHHHHHHHHHHHHHHHHTSC--CSSE
T ss_pred hccCCCChhHeEEEecCCCHHHHHHcCCCCCCEEEEccccEEecCCCeEEeccCccHHHHHHHHHHHHHHhhcC--CCce
Confidence 1123 7999999999999999998753 6789
Q ss_pred EEEEEeCCCCCCCcChHHHHhcCCccCCceEEEEeecCcCCC----------------Ccccc---ccCCCHHHHHHHHH
Q 005255 225 VIFLFNTGEEEGLNGAHSFVTQHPWSTTIRVAVDLEAMGIGG----------------RSALF---QAGPNLWAVENFAA 285 (706)
Q Consensus 225 I~flf~~~EE~gl~GS~~f~~~~~~~~~v~a~iNLD~~G~gg----------------~~~lf---q~g~~~~li~~y~~ 285 (706)
|+|+|+++||.|+.|++.+... .+...+|++|+.+.++ +..-+ ....++.+.+...+
T Consensus 208 v~~~~~~~EE~G~~G~~~~~~~----~~~d~~i~~d~~~~~~~~g~~~~~~~~~lg~G~~i~~~~~~~~~~~~l~~~l~~ 283 (373)
T 1vhe_A 208 VYGVGTVQEEVGLRGAKTAAHT----IQPDIAFGVDVGIAGDTPGISEKEAQSKMGKGPQIIVYDASMVSHKGLRDAVVA 283 (373)
T ss_dssp EEEEEESCCTTTSHHHHHHHHH----HCCSEEEEEEEEECCCSTTCCTTTCCCCTTSCCEEEEEETTEECCHHHHHHHHH
T ss_pred EEEEEECCcccChhhHHHHhcc----cCCCEEEEEeccccCCCCCCcccccccccCCCceEEEeCCCCCCCHHHHHHHHH
Confidence 9999999999999999988632 1346789999876432 10000 00125566665555
Q ss_pred HccCCCCcccccccccCCCCCCCCchHHH--hhcCCCeEEEEEeecCCCCCCCcCCCcCCCCHHHHHHHHHHHHHHHHHH
Q 005255 286 VAKYPSGQIIGQDLFASGVFETATDFQVY--TEVAGLSGLDFAYTDKSAVYHTKNDRLDLLKPGSLQHLGENMLDFLLQT 363 (706)
Q Consensus 286 ~a~~p~~~~l~~e~f~~g~ips~TD~~~F--~~~~GiPgld~a~~~~~~~YHT~~Dt~d~id~~sLq~~g~~~l~ll~~l 363 (706)
+++. .+.....+.. .+.+||...| .. .|+|.+++... . ..+||+. |.++.+.+++..+.+..++..+
T Consensus 284 ~a~~-~gi~~~~~~~----~~ggtDa~~~~~~~-~GiPtv~lg~~-~-~~~Hs~~---E~v~~~dl~~~~~ll~~~l~~l 352 (373)
T 1vhe_A 284 TAEE-AGIPYQFDAI----AGGGTDSGAIHLTA-NGVPALSITIA-T-RYIHTHA---AMLHRDDYENAVKLITEVIKKL 352 (373)
T ss_dssp HHHH-HTCCCEEEEE----TTCCCTHHHHTTST-TCCCEEEEEEE-E-BSTTSSC---EEEEHHHHHHHHHHHHHHHHHC
T ss_pred HHHH-cCCCeEEecC----CCCCccHHHHHHhC-CCCcEEEEccc-c-ccCCChh---heecHHHHHHHHHHHHHHHHHh
Confidence 4321 1111111111 2357999999 44 79999987543 2 2479974 7788999999999999999987
Q ss_pred hcC
Q 005255 364 ASS 366 (706)
Q Consensus 364 a~~ 366 (706)
++.
T Consensus 353 ~~~ 355 (373)
T 1vhe_A 353 DRK 355 (373)
T ss_dssp CHH
T ss_pred cHH
Confidence 653
No 19
>1y0y_A FRV operon protein FRVX; aminopeptidase, PDZ, hydrolase; HET: ATI; 1.60A {Pyrococcus horikoshii} SCOP: b.49.3.1 c.56.5.4 PDB: 1y0r_A* 1xfo_A
Probab=99.63 E-value=3.9e-15 Score=160.82 Aligned_cols=220 Identities=17% Similarity=0.202 Sum_probs=156.4
Q ss_pred HHHHHHHHHcCCCCCCCCHHHHHHHHHHHHHHHhhccccCCcceEEEEeeeccCCCcccccccccCccccccccceEEEE
Q 005255 89 AMKHVKALTQLGPHAVGSDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYSDLNHIVLR 168 (706)
Q Consensus 89 A~~~L~~L~~igpR~~gS~~~~~a~~yL~~~l~~ig~~~~~~~~vevd~f~~~~g~~~~~g~~~~~~~~~y~~~~NVi~~ 168 (706)
..+.|++|+++ |.+.|.++ +++++||.+++++++. +++.| +..|++++
T Consensus 8 ~~~~l~~L~~~-~s~sg~e~-~~~~~~l~~~l~~~g~------~~~~d------------------------~~gnlia~ 55 (353)
T 1y0y_A 8 DYELLKKVVEA-PGVSGYEF-LGIRDVVIEEIKDYVD------EVKVD------------------------KLGNVIAH 55 (353)
T ss_dssp CHHHHHHHHHS-CCBTTCGG-GTHHHHHHHHHGGGSS------EEEEC------------------------TTCCEEEE
T ss_pred HHHHHHHHHhC-CCCCccch-HHHHHHHHHHHHhhCC------eEEEc------------------------CCCCEEEE
Confidence 46789999986 45555442 5789999999999983 34432 34689998
Q ss_pred EcCCCCCCCCCCeEEEeecccccC--------------------------------------------------------
Q 005255 169 ILPKYASEAGENAILVSSHIDTVS-------------------------------------------------------- 192 (706)
Q Consensus 169 i~g~~~~~~~~~~Vll~aH~DSv~-------------------------------------------------------- 192 (706)
++|+ ++.++++||+|+|+
T Consensus 56 ~~g~------~~~i~l~aH~D~v~~~v~~i~~~G~l~~~~~Gg~~~~~~~~~~v~v~~~~g~~~~g~i~~~~~h~~~~~~ 129 (353)
T 1y0y_A 56 KKGE------GPKVMIAAHMDQIGLMVTHIEKNGFLRVAPIGGVDPKTLIAQRFKVWIDKGKFIYGVGASVPPHIQKPED 129 (353)
T ss_dssp ECCS------SCEEEEEEECCBCEEEEEEECTTSCEEEEEESSCCGGGTTTCEEEEEEETTEEEEEEEEC----------
T ss_pred ecCC------CccEEEEeccCcccEEEEEECCCceEEEEEeCCcchhhccCCEEEEEeCCCcEEEEEEeCCCcccCchhh
Confidence 8642 36899999999995
Q ss_pred --------------------------CCCC--------------------CCCChhHHHHHHHHHHHHHhcCCCCCCcEE
Q 005255 193 --------------------------AGEG--------------------AGDCSSCVAVMLELARVMSQWAHEFKNAVI 226 (706)
Q Consensus 193 --------------------------~~pG--------------------A~Dd~sgva~~LE~ar~L~~~~~~p~~~I~ 226 (706)
..+| |.||++|++++|++++.|.+ ++++|+
T Consensus 130 ~~~~~~~~~l~~d~g~~~~~~~~~~gi~~Gd~v~~~~~~~~~~~~~i~gra~D~k~g~a~~l~a~~~l~~----~~~~i~ 205 (353)
T 1y0y_A 130 RKKAPDWDQIFIDIGAESKEEAEDMGVKIGTVITWDGRLERLGKHRFVSIAFDDRIAVYTILEVAKQLKD----AKADVY 205 (353)
T ss_dssp ---CCCGGGCEEECSCSSHHHHHHTTCCTTCEEEECCCCEEETTTEEEETTHHHHHHHHHHHHHHHHCCS----CSSEEE
T ss_pred ccCCCChHHeEEEeCCCCHHHHHHcCCCCCCEEEeccCcEEecCCeEEeccCccHHHHHHHHHHHHHhhc----CCCeEE
Confidence 2345 69999999999999999864 678999
Q ss_pred EEEeCCCCCCCcChHHHHhcCCccCCceEEEEeecCcCCCC-cc--------------c-c---ccCCCHHHHHHHHHHc
Q 005255 227 FLFNTGEEEGLNGAHSFVTQHPWSTTIRVAVDLEAMGIGGR-SA--------------L-F---QAGPNLWAVENFAAVA 287 (706)
Q Consensus 227 flf~~~EE~gl~GS~~f~~~~~~~~~v~a~iNLD~~G~gg~-~~--------------l-f---q~g~~~~li~~y~~~a 287 (706)
|+|+++||.|+.|++.+... .+...++++|+.+.++. .. + + ....++.+.+...+++
T Consensus 206 ~~~~~~EE~g~~G~~~~~~~----~~~~~~i~~d~~~~~~~p~~~~~~g~~~lg~G~~i~~~d~~~~~~~~l~~~l~~~a 281 (353)
T 1y0y_A 206 FVATVQEEVGLRGARTSAFG----IEPDYGFAIDVTIAADIPGTPEHKQVTHLGKGTAIKIMDRSVICHPTIVRWLEELA 281 (353)
T ss_dssp EEEESCCTTTSHHHHHHHHH----HCCSEEEEEEEEECCCSTTCCGGGCCCCTTSCEEEEEEETTEECCHHHHHHHHHHH
T ss_pred EEEECCcccchhHHHHHhhc----cCCCEEEEEecccccCCCCCccccCccccCCCcEEEEeCCCCCCCHHHHHHHHHHH
Confidence 99999999999999988732 23468999998765321 10 0 0 1112566666665544
Q ss_pred cCCCCcccccccccCCCCCCCCchHHH--hhcCCCeEEEEEeecCCCCCCCcCCCcCCCCHHHHHHHHHHHHHHHHHHhc
Q 005255 288 KYPSGQIIGQDLFASGVFETATDFQVY--TEVAGLSGLDFAYTDKSAVYHTKNDRLDLLKPGSLQHLGENMLDFLLQTAS 365 (706)
Q Consensus 288 ~~p~~~~l~~e~f~~g~ips~TD~~~F--~~~~GiPgld~a~~~~~~~YHT~~Dt~d~id~~sLq~~g~~~l~ll~~la~ 365 (706)
+. .+.....+. ..+.+||...| .. .|+|.+++.-. . ..+||+. |.++.+.+.+..+.+..++..+.+
T Consensus 282 ~~-~gi~~~~~~----~~~ggsDa~~~~~~~-~GiPtv~lg~~-~-~~~Hs~~---E~v~~~dl~~~~~ll~~~l~~l~~ 350 (353)
T 1y0y_A 282 KK-HEIPYQLEI----LLGGGTDAGAIHLTK-AGVPTGALSVP-A-RYIHSNT---EVVDERDVDATVELMTKALENIHE 350 (353)
T ss_dssp HH-TTCCEEEEE----CSSCCCTHHHHTTST-TCCCEEEEEEE-E-BSCSSSC---EEEEHHHHHHHHHHHHHHHHHGGG
T ss_pred HH-cCCCEEEee----cCCCCchHHHHHHhC-CCCcEEEEccc-c-cccCCHH---HhcCHHHHHHHHHHHHHHHHhhhh
Confidence 22 122111111 12467999999 44 79999997643 2 3589975 777899999999999999998765
No 20
>2gre_A Deblocking aminopeptidase; structural genomi protein structure initiative, midwest center for structural genomics, MCSG, hydrolase; 2.65A {Bacillus cereus} SCOP: b.49.3.1 c.56.5.4
Probab=99.62 E-value=3.7e-15 Score=160.79 Aligned_cols=223 Identities=15% Similarity=0.247 Sum_probs=146.0
Q ss_pred CHHHHHHHHHHHHcCCCCCCCCHHHHHHHHHHHHHHHhhccccCCcceEEEEeeeccCCCcccccccccCccccccccce
Q 005255 85 SELEAMKHVKALTQLGPHAVGSDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYSDLNH 164 (706)
Q Consensus 85 s~erA~~~L~~L~~igpR~~gS~~~~~a~~yL~~~l~~ig~~~~~~~~vevd~f~~~~g~~~~~g~~~~~~~~~y~~~~N 164 (706)
+.+++.+.|++|+++ |.+.|. ++++++|+.++++++|. ++++| +..|
T Consensus 4 ~~~~~~~~l~~lv~i-~s~s~~--e~~~~~~l~~~l~~~g~------~~~~d------------------------~~gn 50 (349)
T 2gre_A 4 HTKETMELIKELVSI-PSPSGN--TAKIINFIENYVSEWNV------ETKRN------------------------NKGA 50 (349)
T ss_dssp HHHHHHHHHHHHHTS-CCBTTC--CHHHHHHHHHHTTTSSS------EEEEC------------------------SSSC
T ss_pred cHHHHHHHHHHHHhC-CCCCcc--HHHHHHHHHHHHHHhCC------EEEEe------------------------cCCc
Confidence 467899999999997 444443 35689999999999883 34432 2358
Q ss_pred EEEEEcCCCCCCCCCCeEEEeecccccC----------------C-----------------------------------
Q 005255 165 IVLRILPKYASEAGENAILVSSHIDTVS----------------A----------------------------------- 193 (706)
Q Consensus 165 Vi~~i~g~~~~~~~~~~Vll~aH~DSv~----------------~----------------------------------- 193 (706)
++++++|+ .+.+.|++.+|+|+|+ .
T Consensus 51 l~a~~~g~----~~~~~ill~~H~Dtv~~~v~~i~~~G~l~~~~~Gg~~~~~~~~~~v~i~~~~g~~~~g~i~~~~~~~h 126 (349)
T 2gre_A 51 LILTVKGK----NDAQHRLLTAHVDTLGAMVKEIKPDGRLSLSMIGGFRWNSVEGEYCEIETSSGKTYTGTILMHQTSVH 126 (349)
T ss_dssp EEEEECCS----EEEEEEEEEEECCBCEEEEEEECTTSCEEEEEESSCCGGGTTTCEEEEECTTSCEEEEEEECC-----
T ss_pred EEEEecCC----CCCceEEEEecccccceeEEEECCCCeEEEEecCCCccccccCcEEEEEcCCCCEEEEEEeCCCCCcc
Confidence 99999764 1346799999999983 0
Q ss_pred ----------------------------------CC---------------C-----CCCChhHHHHHHHHHHHHHhcCC
Q 005255 194 ----------------------------------GE---------------G-----AGDCSSCVAVMLELARVMSQWAH 219 (706)
Q Consensus 194 ----------------------------------~p---------------G-----A~Dd~sgva~~LE~ar~L~~~~~ 219 (706)
.+ | +.||++|++++|++++.+.+.+.
T Consensus 127 ~~~~~~~~~~~~~~l~~~id~g~~~~~~~~~~gi~~gd~v~~~~~~~~~~~~~i~gr~~D~k~g~a~~l~a~~~l~~~~~ 206 (349)
T 2gre_A 127 VYKDAGEAKRDEKNIEVRIDERVFSADEVRELGIEVGDFVSFDPRVQITESGYIKSRHLDDKVSVAILLKLIKRLQDENV 206 (349)
T ss_dssp --------------CEEEESSCCCSHHHHHHTTCCTTCEEEECCCCEECTTSEEEESCCTTHHHHHHHHHHHHHHHHHTC
T ss_pred ccchhccCCCCHHHceEEeccCCCCHHHHHHcCCCCCCEEEEccccEEccCCeEEEeeccchHHHHHHHHHHHHHHhccC
Confidence 00 1 69999999999999999988776
Q ss_pred CCCCcEEEEEeCCCCCCCcChHHHHhcCCccCCceEEEEeecCcCCC-Cc-----c-c-c--ccCC-CHHHHHHHHHHcc
Q 005255 220 EFKNAVIFLFNTGEEEGLNGAHSFVTQHPWSTTIRVAVDLEAMGIGG-RS-----A-L-F--QAGP-NLWAVENFAAVAK 288 (706)
Q Consensus 220 ~p~~~I~flf~~~EE~gl~GS~~f~~~~~~~~~v~a~iNLD~~G~gg-~~-----~-l-f--q~g~-~~~li~~y~~~a~ 288 (706)
+++++|+|+|+++||.|+.|++.+ ..+...++++|+.+.++ +. . + + +.++ ++.+.+...+.++
T Consensus 207 ~~~~~i~~~~~~~EE~G~~g~~~~------~~~~~~~i~~D~~~~~~~p~~~~~g~~i~~~~~~~~~~~~l~~~l~~~a~ 280 (349)
T 2gre_A 207 TLPYTTHFLISNNEEIGYGGNSNI------PEETVEYLAVDMGALGDGQASDEYTVSICAKDSSGPYHYALRKHLVELAK 280 (349)
T ss_dssp CCSEEEEEEEESCC----CCCCCC------CTTEEEEEEECCCCCSCC--CCTTSEEEEEEETTEECCHHHHHHHHHHHH
T ss_pred CCCceEEEEEECcccCCchhhccc------ccCCCEEEEEecccccCCCCCCCCceEEEEccCCCCCCHHHHHHHHHHHH
Confidence 788999999999999999999876 23578999999987653 21 1 1 1 1122 5666666655432
Q ss_pred CCCCcccccccccCCCCCCCCchHHHhh-cCCCeEEEEEeecCCCCCCCcCCCcCCCCHHHHHHHHHHHHHHHH
Q 005255 289 YPSGQIIGQDLFASGVFETATDFQVYTE-VAGLSGLDFAYTDKSAVYHTKNDRLDLLKPGSLQHLGENMLDFLL 361 (706)
Q Consensus 289 ~p~~~~l~~e~f~~g~ips~TD~~~F~~-~~GiPgld~a~~~~~~~YHT~~Dt~d~id~~sLq~~g~~~l~ll~ 361 (706)
. .+.....+.. ...+||+.+|.. ..|+|.+++. ... .++|| .|.++.+.+.+..+.+..++.
T Consensus 281 ~-~gi~~q~~~~----~ggGsDa~~~~~~~~GiPt~~lg-~~~-~~~Hs----~E~~~~~dl~~~~~ll~~~l~ 343 (349)
T 2gre_A 281 T-NHIEYKVDIY----PYYGSDASAAIRAGFDVKHALIG-AGI-DSSHA----FERTHESSIAHTEALVYAYVM 343 (349)
T ss_dssp H-HTCCEEEEEC----SCC--------CCSSSCEEEEEE-ECC-BSTTS----SEEEEHHHHHHHHHHHHHHHH
T ss_pred H-cCCCcEEecc----CCCCccHHHHHHhCCCCcEEEec-cCc-ccccc----ceeccHHHHHHHHHHHHHHHh
Confidence 1 1211111121 235799988842 3699999774 333 34786 678889999998887777665
No 21
>2wyr_A Cobalt-activated peptidase TET1; hydrolase, large SELF-assembled dodecamer, hyperthermophilic; 2.24A {Pyrococcus horikoshii} PDB: 2cf4_A
Probab=99.62 E-value=4.6e-15 Score=158.73 Aligned_cols=215 Identities=19% Similarity=0.249 Sum_probs=152.3
Q ss_pred HHHHHHHHHcCCCCCCCCHHHHHHHHHHHHHHHhhccccCCcceEEEEeeeccCCCcccccccccCccccccccceEEEE
Q 005255 89 AMKHVKALTQLGPHAVGSDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYSDLNHIVLR 168 (706)
Q Consensus 89 A~~~L~~L~~igpR~~gS~~~~~a~~yL~~~l~~ig~~~~~~~~vevd~f~~~~g~~~~~g~~~~~~~~~y~~~~NVi~~ 168 (706)
..+.|++|+++ |.+.|. ++++++||.+++++++. ++.| +..|++++
T Consensus 4 ~~~~l~~l~~~-~s~sg~--e~~~~~~l~~~l~~~g~-------~~~d------------------------~~gnlia~ 49 (332)
T 2wyr_A 4 MIEKLKKFTQI-PGISGY--EERIREEIIREIKDFAD-------YKVD------------------------AIGNLIVE 49 (332)
T ss_dssp HHHHHHHHHTS-CCBTTC--CHHHHHHHHHHHTTTCC-------CEEC------------------------TTCCEEEE
T ss_pred HHHHHHHHHcC-CCCCCc--HHHHHHHHHHHHhhcCc-------EEEc------------------------CCCeEEEE
Confidence 56789999987 445454 35789999999999872 3332 34789998
Q ss_pred EcCCCCCCCCCCeEEEeecccccC----------------C---------------------------------------
Q 005255 169 ILPKYASEAGENAILVSSHIDTVS----------------A--------------------------------------- 193 (706)
Q Consensus 169 i~g~~~~~~~~~~Vll~aH~DSv~----------------~--------------------------------------- 193 (706)
++|+ .+.++++||+|+|+ .
T Consensus 50 ~~~~------~~~i~l~aH~D~v~~~v~~i~~~G~l~~~~~Gg~~~~~~~~~~v~v~~~~g~~~g~i~~~~~h~~~~~~~ 123 (332)
T 2wyr_A 50 LGEG------EERILFMAHMDEIGLLITGITDEGKLRFRKVGGIDDRLLYGRHVNVVTEKGILDGVIGATPPHLSLERDK 123 (332)
T ss_dssp EESS------SEEEEEEEECCBCEEEEEEECTTSCEEEEEESCCCGGGTTTEEEEEECSSCEEEEEECCCCTTC-----C
T ss_pred ecCC------CceEEEEeccCcccEEEEEECCCCeEEEEecCCcChhhccCCEEEEEcCCCCEEEEEcCCCcccChhhhc
Confidence 8652 36799999999994 1
Q ss_pred ------------------------CCC--------------------CCCChhHHHHHHHHHHHHHhcCCCCCCcEEEEE
Q 005255 194 ------------------------GEG--------------------AGDCSSCVAVMLELARVMSQWAHEFKNAVIFLF 229 (706)
Q Consensus 194 ------------------------~pG--------------------A~Dd~sgva~~LE~ar~L~~~~~~p~~~I~flf 229 (706)
.+| +.||++|++++|+++|.|.+.+ ++++|.|+|
T Consensus 124 ~~~~~~~~~id~g~~~~~~~~~~i~~Gd~~~~~~~~~~~~~~~i~gra~D~k~g~a~~l~a~~~l~~~~--~~~~i~~~~ 201 (332)
T 2wyr_A 124 SVIPWYDLVIDIGAESKEEALELVKPLDFAVFKKHFSVLNGKYVSTRGLDDRFGVVALIEAIKDLVDHE--LEGKVIFAF 201 (332)
T ss_dssp CCCCGGGCCBBCSCSSHHHHHHHCCTTCEEEECCCCEEETTTEEECTTHHHHHHHHHHHHHHHTTTTSC--CSSEEEEEE
T ss_pred cCCChHHEEEEeCCCCHHHHHhhCCCCCEEEEccccEEecCCeEEcccCCcHHHHHHHHHHHHHHhhcC--CCceEEEEE
Confidence 011 6999999999999999998753 679999999
Q ss_pred eCCCCCCCcChHHHHhcCCccCCceEEEEeecCcCCC-----------Ccccc---ccCCCHHHHHHHHHHccCCCCccc
Q 005255 230 NTGEEEGLNGAHSFVTQHPWSTTIRVAVDLEAMGIGG-----------RSALF---QAGPNLWAVENFAAVAKYPSGQII 295 (706)
Q Consensus 230 ~~~EE~gl~GS~~f~~~~~~~~~v~a~iNLD~~G~gg-----------~~~lf---q~g~~~~li~~y~~~a~~p~~~~l 295 (706)
+++||.|+.|++.+++. .+...++++|+.+..+ ...-+ ....++.+.+...++++. .+...
T Consensus 202 ~~~EE~G~~G~~~~~~~----~~~~~~i~~d~~~~~~~p~~~~~lg~G~~i~~~d~~~~~~~~l~~~l~~~~~~-~gi~~ 276 (332)
T 2wyr_A 202 TVQEEVGLKGAKFLANH----YYPQYAFAIDSFACCSPLTGDVKLGKGPVIRAVDNSAIYSRDLARKVWSIAEK-NGIEI 276 (332)
T ss_dssp ESCGGGTSHHHHHHTTT----CCCSEEEEECCEECCSGGGTTCCTTSCCEEEEECSSCBCCHHHHHHHHHHHHH-TTCCC
T ss_pred ECccccCcchHHHHhcc----cCCCEEEEEecccccCCCCCceeeCCCCEEEEcCCCCCCCHHHHHHHHHHHHH-cCCCe
Confidence 99999999999998732 2456899999877531 11100 111256666666554432 12111
Q ss_pred ccccccCCCCCCCCchHHHhhcCCCeEEEEEeecCCCCCCCcCCCcCCCCHHHHHHHHHHHHHHHHH
Q 005255 296 GQDLFASGVFETATDFQVYTEVAGLSGLDFAYTDKSAVYHTKNDRLDLLKPGSLQHLGENMLDFLLQ 362 (706)
Q Consensus 296 ~~e~f~~g~ips~TD~~~F~~~~GiPgld~a~~~~~~~YHT~~Dt~d~id~~sLq~~g~~~l~ll~~ 362 (706)
.. ...+.+||...|.. |+|.+++.-. ...+||+. |.++.+.+++..+.+..++..
T Consensus 277 ~~-----~~~~ggtDa~~~~~--GiPtv~lg~~--~~~~Hs~~---E~v~~~dl~~~~~ll~~~~~~ 331 (332)
T 2wyr_A 277 QI-----GVTGGGTDASAFQD--RSKTLALSVP--IKYLHSEV---ETLHLNDLEKLVKLIEALAFE 331 (332)
T ss_dssp EE-----EECSSCCGGGGGTT--TSEEEEEECE--EBSCSSTT---CEEEHHHHHHHHHHHHHHHHH
T ss_pred EE-----ecCCCCchHHHHHc--CCCEEEEcCC--cCCCCChh---hcccHHHHHHHHHHHHHHHHh
Confidence 11 11246899999986 9999987532 23589974 678899999999988887765
No 22
>2fvg_A Endoglucanase; TM1049, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; 2.01A {Thermotoga maritima} SCOP: b.49.3.1 c.56.5.4
Probab=99.54 E-value=2.9e-14 Score=153.12 Aligned_cols=219 Identities=17% Similarity=0.224 Sum_probs=137.1
Q ss_pred HHHHHHcCCCCCCCCHHHHHHHHHHHHHHHhhccccCCcceEEEEeeeccCCCcccccccccCccccccccceEEEEEcC
Q 005255 92 HVKALTQLGPHAVGSDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYSDLNHIVLRILP 171 (706)
Q Consensus 92 ~L~~L~~igpR~~gS~~~~~a~~yL~~~l~~ig~~~~~~~~vevd~f~~~~g~~~~~g~~~~~~~~~y~~~~NVi~~i~g 171 (706)
.|++|+++ |.+.|. ++++++||.+++++++. ++++| +..|++++++|
T Consensus 3 ~l~~L~~~-~s~sg~--e~~~~~~l~~~l~~~g~------~~~~d------------------------~~gnlia~~~g 49 (340)
T 2fvg_A 3 YLKELSMM-PGVSGD--EGKVRDFIKSKIEGLVD------NLYTD------------------------VLGNLIALKRG 49 (340)
T ss_dssp CHHHHHHS-CCBTTC--CHHHHHHHHHHHGGGSS------EEEEC------------------------TTSCEEEEECC
T ss_pred HHHHHHcC-CCCCCc--hHHHHHHHHHHHHhhCC------EEEEe------------------------CCCcEEEEecC
Confidence 46788886 445444 35689999999999983 34432 23589999876
Q ss_pred CCCCCCCCCeEEEeecccccC-----------------------------------------------------------
Q 005255 172 KYASEAGENAILVSSHIDTVS----------------------------------------------------------- 192 (706)
Q Consensus 172 ~~~~~~~~~~Vll~aH~DSv~----------------------------------------------------------- 192 (706)
+ .+.+.|++.+|+|+|+
T Consensus 50 ~----~~~~~v~l~aH~D~v~~~v~~i~~~G~l~~~~~Gg~~~~~~~~~~v~v~~~~g~i~~~~~h~~~~~~~~~~~~~~ 125 (340)
T 2fvg_A 50 R----DSSKKLLVSAHMDEVGFVVSKIEKDGKVSFLPVGGVDPRILPGKVVQVKNLKGVIGYRPIHLQRDEENTPPRFEN 125 (340)
T ss_dssp S----EEEEEEEEEEECCBCEEEEEEECTTSCEEEEEESCCCGGGCTTCEEEETTEEEEEEECC-----------CCSTT
T ss_pred C----CCCceEEEEeccCcCcEEEEEECCCCEEEEEeeCCcccccccCCEEEECcEEEEEcCCCccccchhhccCCCccc
Confidence 4 1346799999999998
Q ss_pred ----------------CCCC-------------------CCCChhHHHHHHHHHHHHHhcCCCCCCcEEEEEeCCCCCCC
Q 005255 193 ----------------AGEG-------------------AGDCSSCVAVMLELARVMSQWAHEFKNAVIFLFNTGEEEGL 237 (706)
Q Consensus 193 ----------------~~pG-------------------A~Dd~sgva~~LE~ar~L~~~~~~p~~~I~flf~~~EE~gl 237 (706)
..+| +.||++|++++|++++.+. +++++|+|+|+++||.|+
T Consensus 126 l~id~g~~s~~e~~~~i~~gd~v~~~~~~~~~~~~i~gra~D~k~g~a~~l~a~~~l~----~~~~~i~~~~~~~EE~G~ 201 (340)
T 2fvg_A 126 LRIDFGFSSADEAKKYVSIGDYVSFVSDYIEKNGRAVGKAFDDRAGCSVLIDVLESGV----SPAYDTYFVFTVQEETGL 201 (340)
T ss_dssp EEEECSCSSHHHHHTTCCTTCEEEECCCCEEETTEEEESCHHHHHHHHHHHHHHHTCC----CCSEEEEEEEECCCC---
T ss_pred EEEEeCCCCHHHHHhhCCCCCEEEEccCceeecCEEeeccCccHHHHHHHHHHHHHhh----ccCCcEEEEEEcccccch
Confidence 1114 6899999999999999886 467899999999999999
Q ss_pred cChHHHHhcCCccCCceEEEEeecCcCC---CCc-----------c-c--cccC--CCHHHHHHHHHHccCCCCcccccc
Q 005255 238 NGAHSFVTQHPWSTTIRVAVDLEAMGIG---GRS-----------A-L--FQAG--PNLWAVENFAAVAKYPSGQIIGQD 298 (706)
Q Consensus 238 ~GS~~f~~~~~~~~~v~a~iNLD~~G~g---g~~-----------~-l--fq~g--~~~~li~~y~~~a~~p~~~~l~~e 298 (706)
.|++.+.++ .+...+|++|+.+.. |+. . + ...+ .++.+.+...+.++. .+.....+
T Consensus 202 ~G~~~~~~~----~~~~~~i~~d~~~~~~~~G~~~h~~~~~~G~g~~i~~~~~~~~~~~~l~~~l~~~a~~-~gi~~~~~ 276 (340)
T 2fvg_A 202 RGSAVVVEQ----LKPTCAIVVETTTAGDNPELEERKWATHLGDGPAITFYHRGYVIPKEIFQTIVDTAKN-NDIPFQMK 276 (340)
T ss_dssp --CHHHHHH----HCCSEEEEEEEEEECSCSTTCCSSSSCCTTSCCEECSCCSSSCCCHHHHHHHHHHHHH-TTCCCEEC
T ss_pred hhhHHHhhc----cCCCEEEEEecccCCCCCCCccccCCcccCCCcEEEEeCCCCCCCHHHHHHHHHHHHH-cCCCeEEE
Confidence 999999853 234678999886532 211 0 0 0011 145555555444321 11111111
Q ss_pred cccCCCCCCCCchHHHhh-cCCCeEEEEEeecCCCCCCCcCCCcCCCCHHHHHHHHHHHHHHHHHHhc
Q 005255 299 LFASGVFETATDFQVYTE-VAGLSGLDFAYTDKSAVYHTKNDRLDLLKPGSLQHLGENMLDFLLQTAS 365 (706)
Q Consensus 299 ~f~~g~ips~TD~~~F~~-~~GiPgld~a~~~~~~~YHT~~Dt~d~id~~sLq~~g~~~l~ll~~la~ 365 (706)
. ..+.+||...|.. ..|+|.+.+.-. .. .+||+. |.++.+.+++..+.+..++..+++
T Consensus 277 ~----~~~ggtDa~~~~~~~~GiP~v~~g~~-~~-~~Hs~~---E~v~~~dl~~~~~ll~~~~~~l~~ 335 (340)
T 2fvg_A 277 R----RTAGGTDAGRYARTAYGVPAGVISTP-AR-YIHSPN---SIIDLNDYENTKKLIKVLVEEGKI 335 (340)
T ss_dssp C----CC-------------CCSCEEEEEEE-EE-ESSTTC---EEEEHHHHHHHHHHHHHHHHHCHH
T ss_pred e----cCCCCccHHHHHhhCCCCcEEEeccc-cc-ccCChh---hcccHHHHHHHHHHHHHHHHhccc
Confidence 1 1246799999875 269999977533 23 389986 568899999999999999988765
No 23
>3n5f_A L-carbamoylase, N-carbamoyl-L-amino acid hydrolase; hinge domain, M20 peptidase family, evolution, residue, dimerization domain; 2.75A {Bacillus stearothermophilus}
Probab=99.51 E-value=1.8e-13 Score=150.26 Aligned_cols=129 Identities=19% Similarity=0.179 Sum_probs=108.3
Q ss_pred CCHHHHHHHHHHHHcCCC-------CCCCCHHHHHHHHHHHHHHHhhccccCCcceEEEEeeeccCCCcccccccccCcc
Q 005255 84 FSELEAMKHVKALTQLGP-------HAVGSDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKT 156 (706)
Q Consensus 84 fs~erA~~~L~~L~~igp-------R~~gS~~~~~a~~yL~~~l~~ig~~~~~~~~vevd~f~~~~g~~~~~g~~~~~~~ 156 (706)
.+.+|+++.|++|++++. |+..|.++.++++||.++|+++|. +++.|
T Consensus 2 ~~~~~~~~~l~~l~~i~s~~~~g~~r~~~s~~e~~~~~~l~~~l~~~g~------~~~~d-------------------- 55 (408)
T 3n5f_A 2 IQGERLWQRLMELGEVGKQPSGGVTRLSFTAEERRAKDLVASYMREAGL------FVYED-------------------- 55 (408)
T ss_dssp -CHHHHHHHHHHHHTTTBCTTSSBCCCTTSHHHHHHHHHHHHHHHHHTC------EEEEC--------------------
T ss_pred CCHHHHHHHHHHHHccCCCCCCCcccCCCCHHHHHHHHHHHHHHHHCCC------EEEEc--------------------
Confidence 467899999999999854 445588888999999999999983 44432
Q ss_pred ccccccceEEEEEcCCCCCCCCCCeEEEeecccccCCCCCCCCChhHHHHHHHHHHHHHhcCCCCCCcEEEEEeCCCCC-
Q 005255 157 LIYSDLNHIVLRILPKYASEAGENAILVSSHIDTVSAGEGAGDCSSCVAVMLELARVMSQWAHEFKNAVIFLFNTGEEE- 235 (706)
Q Consensus 157 ~~y~~~~NVi~~i~g~~~~~~~~~~Vll~aH~DSv~~~pGA~Dd~sgva~~LE~ar~L~~~~~~p~~~I~flf~~~EE~- 235 (706)
...|++++++|+ +++.+.|++++|+|+||. .|+.|++.|++++|++++.|.+.+.+++++|.|+|+.+||.
T Consensus 56 ----~~gnv~a~~~g~---~~~~~~i~l~aH~D~v~~-~g~~d~~~g~a~~l~~~~~l~~~~~~~~~~i~~~~~~~EE~~ 127 (408)
T 3n5f_A 56 ----AAGNLIGRKEGT---NPDATVVLVGSHLDSVYN-GGCFDGPLGVLAGVEVVQTMNEHGVVTHHPIEVVAFTDEEGA 127 (408)
T ss_dssp ----TTCCEEEEECCS---STTSCEEEEEEESCCCTT-BCSSTTHHHHHHHHHHHHHHHHTTCCCSSCEEEEEESCSSCT
T ss_pred ----CCCCEEEEecCC---CCCCCEEEEEecCCCCCC-CCccCCHHHHHHHHHHHHHHHHcCCCCCCCEEEEEEcCcccc
Confidence 235999999875 223689999999999994 58899999999999999999998777899999999999996
Q ss_pred ----CCcChHHHHhc
Q 005255 236 ----GLNGAHSFVTQ 246 (706)
Q Consensus 236 ----gl~GS~~f~~~ 246 (706)
|+.||+.++.+
T Consensus 128 ~~~~g~~Gs~~~~~~ 142 (408)
T 3n5f_A 128 RFRFGMIGSRAMAGT 142 (408)
T ss_dssp TTTCCCHHHHHHHTC
T ss_pred ccCCCCcCHHHHHcC
Confidence 68899999843
No 24
>2zog_A Cytosolic non-specific dipeptidase; metallopeptidase, protein-inhibitor complex, CNDP2, CNDP DIP 2, bestatin, L-carnosine, carnosinase, Zn; HET: BES; 1.70A {Mus musculus} PDB: 2zof_A*
Probab=99.48 E-value=5.4e-13 Score=149.20 Aligned_cols=156 Identities=13% Similarity=0.155 Sum_probs=115.8
Q ss_pred CHHHHHHHHHHHHcCCCCCCCCH----HHHHHHHHHHHHHHhhccccCCcceEEEEeeeccCCCcccccccccCcccccc
Q 005255 85 SELEAMKHVKALTQLGPHAVGSD----ALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYS 160 (706)
Q Consensus 85 s~erA~~~L~~L~~igpR~~gS~----~~~~a~~yL~~~l~~ig~~~~~~~~vevd~f~~~~g~~~~~g~~~~~~~~~y~ 160 (706)
..+++.+.+++|.++ |.+.+.+ ++.++.+||.++|+++|. +++.+..... ...+ +. ...
T Consensus 18 ~~~~~~~~l~~l~~~-ps~s~~e~~~~~~~~~~~~l~~~l~~~G~------~~~~~~~~~~----~~~~----~~--~~~ 80 (479)
T 2zog_A 18 NQDRYVKKLAEWVAI-QSVSAWPEKRGEIRRMMEVAAADVQRLGG------SVELVDIGKQ----KLPD----GS--EIP 80 (479)
T ss_dssp THHHHHHHHHHHHHS-CCBTTCGGGHHHHHHHHHHHHHHHHHTTC------EEEEECCCEE----ECTT----SC--EEE
T ss_pred hHHHHHHHHHHHhcC-CCccCCcccchHHHHHHHHHHHHHHHcCC------eEEEeecccc----ccCC----Cc--ccC
Confidence 357889999999997 4444433 446899999999999983 4544321000 0000 00 000
Q ss_pred ccceEEEEEcCCCCCCCCCCeEEEeecccccCC---------------------CCCCCCChhHHHHHHHHHHHHHhcCC
Q 005255 161 DLNHIVLRILPKYASEAGENAILVSSHIDTVSA---------------------GEGAGDCSSCVAVMLELARVMSQWAH 219 (706)
Q Consensus 161 ~~~NVi~~i~g~~~~~~~~~~Vll~aH~DSv~~---------------------~pGA~Dd~sgva~~LE~ar~L~~~~~ 219 (706)
...||+++++++ .+.+.|++.+|+|+||. ++|+.||+.|++++|++++.|.+.+.
T Consensus 81 ~~~~v~a~~~~~----~~~~~i~l~aH~D~vp~~~~~~w~~~Pf~~~~~~g~l~grGa~D~K~g~a~~l~a~~~l~~~~~ 156 (479)
T 2zog_A 81 LPPILLGKLGSD----PQKKTVCIYGHLDVQPAALEDGWDSEPFTLVEREGKLYGRGSTDDKGPVAGWMNALEAYQKTGQ 156 (479)
T ss_dssp CCCEEEEEECCC----TTSCEEEEEEECCBCCCCGGGTCSSCTTSCEEETTEEESTTTTTTHHHHHHHHHHHHHHHHTTC
T ss_pred CCCEEEEEecCC----CCCCeEEEEEecCCCCCCccccCcCCCCcceeECCEEEeeccccChHHHHHHHHHHHHHHHhCC
Confidence 127999999653 24578999999999975 37889999999999999999999877
Q ss_pred CCCCcEEEEEeCCCCCCCcChHHHHhcCCc--cCCceEEEEeec
Q 005255 220 EFKNAVIFLFNTGEEEGLNGAHSFVTQHPW--STTIRVAVDLEA 261 (706)
Q Consensus 220 ~p~~~I~flf~~~EE~gl~GS~~f~~~~~~--~~~v~a~iNLD~ 261 (706)
+++++|+|+|+.+||.|..|++.+++++.. ..++.+++++|.
T Consensus 157 ~~~~~v~~~~~~~EE~g~~Ga~~~~~~~~~~~~~~~d~~i~~e~ 200 (479)
T 2zog_A 157 EIPVNLRFCLEGMEESGSEGLDELIFAQKDKFFKDVDYVCISDN 200 (479)
T ss_dssp CCSSEEEEEEESCGGGTCTTHHHHHHHTTTTTTTTCCEEEECCC
T ss_pred CCCCcEEEEEecccccCCccHHHHHHhhhhhhcccCCEEEEeCC
Confidence 788999999999999999999999977642 245778888885
No 25
>1cg2_A Carboxypeptidase G2; metallocarboxypeptidase, hydrolase; 2.50A {Pseudomonas SP} SCOP: c.56.5.4 d.58.19.1
Probab=99.45 E-value=5.2e-13 Score=145.72 Aligned_cols=147 Identities=21% Similarity=0.304 Sum_probs=113.5
Q ss_pred CHHHHHHHHHHHHcCCCCCCCCH-HHHHHHHHHHHHHHhhccccCCcceEEEEeeeccCCCcccccccccCccccccccc
Q 005255 85 SELEAMKHVKALTQLGPHAVGSD-ALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYSDLN 163 (706)
Q Consensus 85 s~erA~~~L~~L~~igpR~~gS~-~~~~a~~yL~~~l~~ig~~~~~~~~vevd~f~~~~g~~~~~g~~~~~~~~~y~~~~ 163 (706)
..+++.+.|++|.++. .+.+.+ +..++.+||.++++++|. +++.+..... ....
T Consensus 17 ~~~~~~~~l~~lv~i~-s~s~~~~~~~~~~~~l~~~l~~~G~------~~~~~~~~~~------------------~~~~ 71 (393)
T 1cg2_A 17 EQPAVIKTLEKLVNIE-TGTGDAEGIAAAGNFLEAELKNLGF------TVTRSKSAGL------------------VVGD 71 (393)
T ss_dssp HHHHHHHHHHHHHTSC-CBTTCHHHHHHHHHHHHHHHHHTTC------EEEEEECSTT------------------CCSE
T ss_pred hHHHHHHHHHHHhcCC-CCCCCHHHHHHHHHHHHHHHHHcCC------eEEEEecCcC------------------CCCC
Confidence 3578899999999984 444554 346899999999999983 4444321000 0135
Q ss_pred eEEEEEcCCCCCCCCCCeEEEeecccccCC-----------------CCCCCCChhHHHHHHHHHHHHHhcCCCCCCcEE
Q 005255 164 HIVLRILPKYASEAGENAILVSSHIDTVSA-----------------GEGAGDCSSCVAVMLELARVMSQWAHEFKNAVI 226 (706)
Q Consensus 164 NVi~~i~g~~~~~~~~~~Vll~aH~DSv~~-----------------~pGA~Dd~sgva~~LE~ar~L~~~~~~p~~~I~ 226 (706)
|++++++|+ ..+.|++.+|+|+||. ++|+.||+.|++++|++++.|.+.+.+++++|+
T Consensus 72 ~v~a~~~g~-----~~~~i~l~aH~D~vp~~~~~~~~Pf~~~~g~l~grG~~D~k~~~a~~l~a~~~l~~~~~~~~~~v~ 146 (393)
T 1cg2_A 72 NIVGKIKGR-----GGKNLLLMSHMDTVYLKGILAKAPFRVEGDKAYGPGIADDKGGNAVILHTLKLLKEYGVRDYGTIT 146 (393)
T ss_dssp EEEEEEECS-----SCCCEEEEEECCBSCCTTHHHHSCCEEETTEEECTTTTTTHHHHHHHHHHHHHHHHTTCCCSSEEE
T ss_pred eEEEEECCC-----CCceEEEEEecCcCCCCCccccCCeeeeCCEEEcCCcccchHHHHHHHHHHHHHHhcCCCCCCCEE
Confidence 999999764 1367999999999974 389999999999999999999987767777999
Q ss_pred EEEeCCCCCCCcChHHHHhcCCccCCceEEEEeecCc
Q 005255 227 FLFNTGEEEGLNGAHSFVTQHPWSTTIRVAVDLEAMG 263 (706)
Q Consensus 227 flf~~~EE~gl~GS~~f~~~~~~~~~v~a~iNLD~~G 263 (706)
|+|+.+||.|..|++.++++.. .++.+++++|..+
T Consensus 147 ~~~~~~EE~g~~G~~~~~~~~~--~~~d~~i~~e~~~ 181 (393)
T 1cg2_A 147 VLFNTDEEKGSFGSRDLIQEEA--KLADYVLSFEPTS 181 (393)
T ss_dssp EEEESCGGGTTTTTHHHHHHHH--HHCSEEEECCCEE
T ss_pred EEEEcccccCCccHHHHHHHHh--hcCCEEEEeCCCC
Confidence 9999999999999999986432 2466788888654
No 26
>2pok_A Peptidase, M20/M25/M40 family; M20 family peptidase, metallo protein, MCSG, structural GENO PSI-2, protein structure initiative; HET: BGC; 1.90A {Streptococcus pneumoniae}
Probab=99.40 E-value=1.5e-12 Score=146.08 Aligned_cols=145 Identities=15% Similarity=0.223 Sum_probs=110.9
Q ss_pred HH-HHHHHHHHHHcCCCCCCC-CHHHHHHHHHHHHHHHhhccccCCcceEEEEeeeccCCCcccccccccCccccccccc
Q 005255 86 EL-EAMKHVKALTQLGPHAVG-SDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYSDLN 163 (706)
Q Consensus 86 ~e-rA~~~L~~L~~igpR~~g-S~~~~~a~~yL~~~l~~ig~~~~~~~~vevd~f~~~~g~~~~~g~~~~~~~~~y~~~~ 163 (706)
.+ ++.+.+++|.++. .+.+ .++..++++||.++++++|. +++.+. . ....
T Consensus 42 ~~~~~~~~l~~l~~ip-s~s~~e~~~~~~~~~l~~~l~~~G~------~~~~~~--~-------------------~~~~ 93 (481)
T 2pok_A 42 VAQHYFEVLRTLISKK-SVFAQQVGLKEVANYLGEIFKRVGA------EVEIDE--S-------------------YTAP 93 (481)
T ss_dssp HHHHHHHHHHHHHHSC-CCGGGCTTHHHHHHHHHHHHHHTTC------EEEEEC--S-------------------SSSC
T ss_pred hhHHHHHHHHHHHcCC-CcCCCCHHHHHHHHHHHHHHHHcCC------EEEEec--C-------------------CCCc
Confidence 45 7889999999974 3333 23457899999999999983 444431 0 1357
Q ss_pred eEEEEEcCCCCCCCCCCeEEEeecccccCC---------------------CCCCCCChhHHHHHHHHHHHHHhcCCCCC
Q 005255 164 HIVLRILPKYASEAGENAILVSSHIDTVSA---------------------GEGAGDCSSCVAVMLELARVMSQWAHEFK 222 (706)
Q Consensus 164 NVi~~i~g~~~~~~~~~~Vll~aH~DSv~~---------------------~pGA~Dd~sgva~~LE~ar~L~~~~~~p~ 222 (706)
||+++++|+ +++.+.|++.+|+|+||. ++|+.||++|++++|++++.|.+.+.+++
T Consensus 94 ~v~a~~~g~---~~~~~~i~l~aH~D~vp~~~~~~w~~~pf~~~~~~g~l~grG~~D~k~g~a~~l~a~~~l~~~~~~~~ 170 (481)
T 2pok_A 94 FVMAHFKSS---RPDAKTLIFYNHYDTVPADGDQVWTEDPFTLSVRNGFMYGRGVDDDKGHITARLSALRKYMQHHDDLP 170 (481)
T ss_dssp EEEEEECCS---STTCCEEEEEEECCCCCSCSSCCCSSCTTSCEEETTEEESTTTTTTHHHHHHHHHHHHHHHHTCSSCS
T ss_pred EEEEEecCC---CCCCCeEEEEEeccCcCCCCccccccCCCCceeeCCeEEccccccCcHHHHHHHHHHHHHHHhcCCCC
Confidence 999999864 124578999999999874 37899999999999999999998755788
Q ss_pred CcEEEEEeCCCCCCCcChHHHHhcCCc-cCCceEEEEeec
Q 005255 223 NAVIFLFNTGEEEGLNGAHSFVTQHPW-STTIRVAVDLEA 261 (706)
Q Consensus 223 ~~I~flf~~~EE~gl~GS~~f~~~~~~-~~~v~a~iNLD~ 261 (706)
++|+|+|+.+||.|..|++.+++++.. .+++.++++.|.
T Consensus 171 ~~v~~~~~~~EE~g~~g~~~~~~~~~~~~~~~d~~i~~~~ 210 (481)
T 2pok_A 171 VNISFIMEGAEESASTDLDKYLEKHADKLRGADLLVWEQG 210 (481)
T ss_dssp SEEEEEEESCGGGTTTTHHHHHHHHHHHHTTCSEEECSCC
T ss_pred CCEEEEEecccccCchhHHHHHHHhHhhccCCCEEEECCC
Confidence 999999999999999999998865421 122556666665
No 27
>3ct9_A Acetylornithine deacetylase; NP_812461.1, A putative zinc peptidase, peptidase family M20 structural genomics; 2.31A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.40 E-value=2.8e-12 Score=138.35 Aligned_cols=135 Identities=22% Similarity=0.266 Sum_probs=106.7
Q ss_pred HHHHHHHHHHHHcCCCCCCCCHHHHHHHHHHHHHHHhhccccCCcceEEEEeeeccCCCcccccccccCccccccccceE
Q 005255 86 ELEAMKHVKALTQLGPHAVGSDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYSDLNHI 165 (706)
Q Consensus 86 ~erA~~~L~~L~~igpR~~gS~~~~~a~~yL~~~l~~ig~~~~~~~~vevd~f~~~~g~~~~~g~~~~~~~~~y~~~~NV 165 (706)
.++..+.+++|.++ |.+.+ .+.++++||.++++++|. +++.+ ..|+
T Consensus 10 ~~~~~~~~~~l~~~-ps~s~--~e~~~~~~l~~~l~~~g~------~~~~~-------------------------~~nv 55 (356)
T 3ct9_A 10 TAEAVSLLKSLISI-PSISR--EETQAADFLQNYIEAEGM------QTGRK-------------------------GNNV 55 (356)
T ss_dssp HHHHHHHHHHHHTS-CCBTT--CCHHHHHHHHHHHHHTTC------CEEEE-------------------------TTEE
T ss_pred HHHHHHHHHHHhcC-CCCCC--ChHHHHHHHHHHHHHCCC------eEEEE-------------------------eeeE
Confidence 35788899999987 33333 345788999999999983 34331 3689
Q ss_pred EEEEcCCCCCCCCCCeEEEeecccccCC-------------------CCCCCCChhHHHHHHHHHHHHHhcCCCCCCcEE
Q 005255 166 VLRILPKYASEAGENAILVSSHIDTVSA-------------------GEGAGDCSSCVAVMLELARVMSQWAHEFKNAVI 226 (706)
Q Consensus 166 i~~i~g~~~~~~~~~~Vll~aH~DSv~~-------------------~pGA~Dd~sgva~~LE~ar~L~~~~~~p~~~I~ 226 (706)
+++++|+ +.+.+.|++.+|+|+||. ++|+.||++|++++|++++.|.+.+ ++++|+
T Consensus 56 ~a~~~g~---~~~~~~i~l~aH~D~vp~~~~w~~~p~~~~~~~g~~~g~G~~D~k~g~a~~l~a~~~l~~~~--~~~~v~ 130 (356)
T 3ct9_A 56 WCLSPMF---DLKKPTILLNSHIDTVKPVNGWRKDPFTPREENGKLYGLGSNDAGASVVSLLQVFLQLCRTS--QNYNLI 130 (356)
T ss_dssp EEECSSC---CTTSCEEEEEEECCBCCCC-------CCCEECSSEEESTTTTTTHHHHHHHHHHHHHHTTSC--CSSEEE
T ss_pred EEEEecC---CCCCCeEEEEccccccCCCCCCCCCCCccEEECCEEEecCcccchHHHHHHHHHHHHHHhcC--CCCCEE
Confidence 9999762 124578999999999974 3788899999999999999999865 789999
Q ss_pred EEEeCCCCC-CCcChHHHHhcCCccCCceEEEEeecC
Q 005255 227 FLFNTGEEE-GLNGAHSFVTQHPWSTTIRVAVDLEAM 262 (706)
Q Consensus 227 flf~~~EE~-gl~GS~~f~~~~~~~~~v~a~iNLD~~ 262 (706)
|+|+.+||. |+.|++.++++.+ ++.++++.|..
T Consensus 131 ~~~~~~EE~~g~~G~~~~~~~~~---~~d~~i~~ep~ 164 (356)
T 3ct9_A 131 YLASCEEEVSGKEGIESVLPGLP---PVSFAIVGEPT 164 (356)
T ss_dssp EEEECCGGGTCTTTHHHHGGGSC---CCSEEEECCSB
T ss_pred EEEEeCcccCCccCHHHHHhhCC---CCCEEEEcCCC
Confidence 999999999 8999999997652 34567777754
No 28
>3ife_A Peptidase T; metallopeptidase, aminopeptidase, hydro metal-binding, metalloprotease, protease; HET: SUC; 1.55A {Bacillus anthracis}
Probab=99.39 E-value=1.3e-12 Score=144.79 Aligned_cols=139 Identities=12% Similarity=0.159 Sum_probs=107.3
Q ss_pred HHHHHHHHHHHcCCCCCCC--------CHHHHHHHHHHHHHHHhhccccCCcceEEEEeeeccCCCcccccccccCcccc
Q 005255 87 LEAMKHVKALTQLGPHAVG--------SDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLI 158 (706)
Q Consensus 87 erA~~~L~~L~~igpR~~g--------S~~~~~a~~yL~~~l~~ig~~~~~~~~vevd~f~~~~g~~~~~g~~~~~~~~~ 158 (706)
+++++.+++|++|.. +.+ ++++.++++||.++++++|.+ ++++|
T Consensus 27 ~~~~~~l~~lv~i~s-~s~~~~~~~~~~~~e~~~~~~l~~~l~~~G~~-----~~~~d---------------------- 78 (434)
T 3ife_A 27 EELIERFTRYVKIDT-QSNEDSHTVPTTPGQIEFGKLLVEELKEVGLT-----EVTMD---------------------- 78 (434)
T ss_dssp HHHHHHHHHHHTSCC-BCCTTCCSSSSSHHHHHHHHHHHHHHHHHTCE-----EEEEC----------------------
T ss_pred HHHHHHHHhhEEeec-cCCCccCCCCCCHHHHHHHHHHHHHHHHcCCc-----eEEEC----------------------
Confidence 678899999999843 223 456779999999999999831 14432
Q ss_pred ccccceEEEEEcCCCCCCCCCCeEEEeecccccCCC--------------------------------------------
Q 005255 159 YSDLNHIVLRILPKYASEAGENAILVSSHIDTVSAG-------------------------------------------- 194 (706)
Q Consensus 159 y~~~~NVi~~i~g~~~~~~~~~~Vll~aH~DSv~~~-------------------------------------------- 194 (706)
+..||+++++|+. +.+.+.|++++|+|+||..
T Consensus 79 --~~~nv~a~~~g~~--~~~~~~v~l~~H~DtVp~~~~~~~~p~~~~~~dg~~i~l~~~~~~~~~~~~~~~~~~~~g~~~ 154 (434)
T 3ife_A 79 --DNGYVMATLPANT--DKDVPVIGFLAHLDTATDFTGKNVKPQIHENFDGNAITLNEELNIVLTPEQFPELPSYKGHTI 154 (434)
T ss_dssp --TTSCEEEEECCBS--SSCCCCEEEEEECCBCTTSCCSSCCCEEETTCCSSCEEEETTTTEEECTTTCTTGGGGTTSCE
T ss_pred --CCcEEEEEeCCCC--CCCCCeEEEEEEcccCCCCCCCCCccEEeecCCCCceecccccccccChhhChhHHhhcCCcE
Confidence 2478999998752 1245789999999999751
Q ss_pred ---CC----CCCChhHHHHHHHHHHHHHhcCCCCCCcEEEEEeCCCCCCCcChHHHHhcCCccCCceEEEEeec
Q 005255 195 ---EG----AGDCSSCVAVMLELARVMSQWAHEFKNAVIFLFNTGEEEGLNGAHSFVTQHPWSTTIRVAVDLEA 261 (706)
Q Consensus 195 ---pG----A~Dd~sgva~~LE~ar~L~~~~~~p~~~I~flf~~~EE~gl~GS~~f~~~~~~~~~v~a~iNLD~ 261 (706)
+| +.||+.|++++|++++.|.+.+..++++|.|+|..+||.| .|++.+..+. -++.+++++|.
T Consensus 155 i~grG~t~~~~D~K~gva~~l~a~~~L~~~~~~~~~~i~~if~~~EE~g-~Ga~~~~~~~---~~~d~~~~~d~ 224 (434)
T 3ife_A 155 ITTDGTTLLGADDKAGLTEIMVAMNYLIHNPQIKHGKIRVAFTPDEEIG-RGPAHFDVEA---FGASFAYMMDG 224 (434)
T ss_dssp EECCSSSCCCHHHHHHHHHHHHHHHHHHTCTTSCBCCEEEEEESCGGGT-CTGGGCCHHH---HCCSEEEECCC
T ss_pred EECCCccchhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEECCcccC-hHHHHhhhhh---cCCCEEEEecC
Confidence 12 4899999999999999999887778999999999999999 8988764221 14677788774
No 29
>3dlj_A Beta-Ala-His dipeptidase; CNDP1, carnosine dipeptidase 1, structural genomics, structu genomics consortium, SGC, metallopeptidase M20 family; 2.26A {Homo sapiens}
Probab=99.37 E-value=9.5e-12 Score=139.78 Aligned_cols=157 Identities=14% Similarity=0.154 Sum_probs=115.6
Q ss_pred CHHHHHHHHHHHHcCCCCC--CCCH----HHHHHHHHHHHHHHhhccccCCcceEEEEeeeccCCCcccccccccCcccc
Q 005255 85 SELEAMKHVKALTQLGPHA--VGSD----ALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLI 158 (706)
Q Consensus 85 s~erA~~~L~~L~~igpR~--~gS~----~~~~a~~yL~~~l~~ig~~~~~~~~vevd~f~~~~g~~~~~g~~~~~~~~~ 158 (706)
..++..+.+++|.++ |-+ .+.+ ++.++.+||.++|+++|. +++.+..... ... .|. .
T Consensus 23 ~~~~~i~~l~~lv~i-ps~~~s~~~~~~~~~~~~~~~l~~~l~~~G~------~~~~~~~~~~----~~~----~g~--~ 85 (485)
T 3dlj_A 23 HQDEFVQTLKEWVAI-ESDSVQPVPRFRQELFRMMAVAADTLQRLGA------RVASVDMGPQ----QLP----DGQ--S 85 (485)
T ss_dssp THHHHHHHHHHHHTS-CCBSSSCCHHHHHHHHHHHHHHHHHHHHTTC------EEEEECCCEE----EC------CC--E
T ss_pred hHHHHHHHHHHHhcC-CCccCCCCccccHHHHHHHHHHHHHHHHcCC------eEEEEecCcc----ccc----CCC--c
Confidence 357888999999987 434 3442 246899999999999983 3443211000 000 000 0
Q ss_pred ccccceEEEEEcCCCCCCCCCCeEEEeecccccCC---------------------CCCCCCChhHHHHHHHHHHHHHhc
Q 005255 159 YSDLNHIVLRILPKYASEAGENAILVSSHIDTVSA---------------------GEGAGDCSSCVAVMLELARVMSQW 217 (706)
Q Consensus 159 y~~~~NVi~~i~g~~~~~~~~~~Vll~aH~DSv~~---------------------~pGA~Dd~sgva~~LE~ar~L~~~ 217 (706)
+....||++++.++ .+.+.|++.+|+|+||. ++|+.||++|++++|++++.|.+.
T Consensus 86 ~~~~~~v~a~~~~~----~~~~~i~l~aH~D~vp~~~~~~w~~~Pf~~~~~~g~l~grG~~D~k~~~a~~l~a~~~l~~~ 161 (485)
T 3dlj_A 86 LPIPPVILAELGSD----PTKGTVCFYGHLDVQPADRGDGWLTDPYVLTEVDGKLYGRGATDNKGPVLAWINAVSAFRAL 161 (485)
T ss_dssp EECCCEEEEEECCC----TTSCEEEEEEECCBCCCCGGGTCSSCTTSCEEETTEEESTTTTTTHHHHHHHHHHHHHHHHT
T ss_pred cCCCcEEEEEECCC----CCCCEEEEEeeecCCCCCCcccCCCCCCccEEECCEEEecccccCcHHHHHHHHHHHHHHHh
Confidence 01146899998643 34578999999999985 389999999999999999999998
Q ss_pred CCCCCCcEEEEEeCCCCCCCcChHHHHhcCCc--cCCceEEEEeecC
Q 005255 218 AHEFKNAVIFLFNTGEEEGLNGAHSFVTQHPW--STTIRVAVDLEAM 262 (706)
Q Consensus 218 ~~~p~~~I~flf~~~EE~gl~GS~~f~~~~~~--~~~v~a~iNLD~~ 262 (706)
+.+++.+|.|+|..+||.|..|++.+++++.. .+++.+++++|..
T Consensus 162 ~~~~~~~v~~~~~~~EE~g~~g~~~~~~~~~~~~~~~~d~~~~~~~~ 208 (485)
T 3dlj_A 162 EQDLPVNIKFIIEGMEEAGSVALEELVEKEKDRFFSGVDYIVISDNL 208 (485)
T ss_dssp TCCCSSEEEEEEESCGGGTTTTHHHHHHHHTTTTSTTCCEEEECCCB
T ss_pred CCCCCccEEEEEEcccccCCccHHHHHHhhhhhcccCCCEEEEcCCC
Confidence 77888999999999999999999999976543 3468888888853
No 30
>3pfo_A Putative acetylornithine deacetylase; metal binding, merops M20A family, amino-acid biosynthesis, metallopeptidase; 1.90A {Rhodopseudomonas palustris}
Probab=99.36 E-value=4.9e-12 Score=139.50 Aligned_cols=158 Identities=15% Similarity=0.080 Sum_probs=112.1
Q ss_pred HHHHHHHHHHHcCCCCCCCCHHHHHHHHHHHHHHHhhccccCCcceEEEEeeeccCCCcccccccccCccc-cccccceE
Q 005255 87 LEAMKHVKALTQLGPHAVGSDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTL-IYSDLNHI 165 (706)
Q Consensus 87 erA~~~L~~L~~igpR~~gS~~~~~a~~yL~~~l~~ig~~~~~~~~vevd~f~~~~g~~~~~g~~~~~~~~-~y~~~~NV 165 (706)
+++.+.+++|.++ |.+ |..+.++.+||.++|+++|. +++........ .....+ +..... ......|+
T Consensus 26 ~~~~~~l~~l~~~-ps~--s~~e~~~~~~l~~~l~~~G~------~~~~~~~~~~~-~~~~~~--~~~~~~~~~~~~~~v 93 (433)
T 3pfo_A 26 NDQVAFLQRMVQF-RSV--RGEEAPQQEWLAQQFADRGY------KVDTFSLADVD-IASHPK--AAPMDTIDPAGSMQV 93 (433)
T ss_dssp HHHHHHHHHHHTS-CCB--TTCCHHHHHHHHHHHHHTTC------EEEEEETGGGT-GGGSTT--CCCCTTCCGGGCEEE
T ss_pred HHHHHHHHHHhcC-CCC--CCCHHHHHHHHHHHHHHCCC------ceEEEecchhh-hhcccc--ccccccccCCCCcEE
Confidence 6788889999886 333 44456899999999999983 34332111000 000000 000000 12346899
Q ss_pred EEEEcCCCCCCCCCCeEEEeecccccCCC---------------------CCCCCChhHHHHHHHHHHHHHhcCCCCCCc
Q 005255 166 VLRILPKYASEAGENAILVSSHIDTVSAG---------------------EGAGDCSSCVAVMLELARVMSQWAHEFKNA 224 (706)
Q Consensus 166 i~~i~g~~~~~~~~~~Vll~aH~DSv~~~---------------------pGA~Dd~sgva~~LE~ar~L~~~~~~p~~~ 224 (706)
+++++|+ .+.+.|++.+|+|+||.. +|+.||++|++++|++++.|.+.+.+++++
T Consensus 94 ia~~~g~----~~~~~v~l~aH~D~vp~~~~~~w~~~pf~~~~~~g~~~g~G~~D~k~~~a~~l~a~~~l~~~~~~~~~~ 169 (433)
T 3pfo_A 94 VATADSD----GKGRSLILQGHIDVVPEGPVDLWSDPPYEAKVRDGWMIGRGAQDMKGGVSAMIFALDAIRTAGYAPDAR 169 (433)
T ss_dssp EEEECCC----CCSCCEEEEEECCBCCCCCGGGCSSCTTTCCEETTEEECTTTTTTHHHHHHHHHHHHHHHHTTEEESSC
T ss_pred EEEEecC----CCCCEEEEEcccCCcCCCCcccCCCCCCCcEEECCEEEecchhhhhHHHHHHHHHHHHHHHcCCCCCcc
Confidence 9999864 245789999999999853 599999999999999999999877678899
Q ss_pred EEEEEeCCCCCCCcChHHHHhcCCccCCceEEEEeecCc
Q 005255 225 VIFLFNTGEEEGLNGAHSFVTQHPWSTTIRVAVDLEAMG 263 (706)
Q Consensus 225 I~flf~~~EE~gl~GS~~f~~~~~~~~~v~a~iNLD~~G 263 (706)
|.|+|..+||.|..|++.++++. .++.++++.|..+
T Consensus 170 v~~~~~~~EE~g~~G~~~~~~~~---~~~d~~i~~ep~~ 205 (433)
T 3pfo_A 170 VHVQTVTEEESTGNGALSTLMRG---YRADACLIPEPTG 205 (433)
T ss_dssp EEEEEESCTTTTCHHHHHHHHTT---CCCSEEEECCCCS
T ss_pred EEEEEEecCccCChhHHHHHhcC---CCCCEEEEeCCCC
Confidence 99999999999989999998543 2466778887554
No 31
>3gb0_A Peptidase T; NP_980509.1, aminopeptidase PEPT, peptidase family M20/M25/M structural genomics, joint center for structural genomics; 2.04A {Bacillus cereus atcc 10987}
Probab=99.35 E-value=3.6e-12 Score=137.82 Aligned_cols=149 Identities=20% Similarity=0.272 Sum_probs=111.5
Q ss_pred CCCHHHHHHHHHHHHcCCCCCCCCHHHHHHHHHHHHHHHhhccccCCcceEEEEeeeccCCCcccccccccCcccccccc
Q 005255 83 GFSELEAMKHVKALTQLGPHAVGSDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYSDL 162 (706)
Q Consensus 83 ~fs~erA~~~L~~L~~igpR~~gS~~~~~a~~yL~~~l~~ig~~~~~~~~vevd~f~~~~g~~~~~g~~~~~~~~~y~~~ 162 (706)
.++.+++++.+++|.++. . .|.++.++++||.++|+++|. +++.+.... ......
T Consensus 2 ~~~~~~~~~~l~~l~~~p-s--~s~~e~~~~~~l~~~l~~~G~------~v~~~~~~~----------------~~~~~~ 56 (373)
T 3gb0_A 2 MINQERLVNEFMELVQVD-S--ETKFEAEICKVLTKKFTDLGV------EVFEDDTMA----------------VTGHGA 56 (373)
T ss_dssp CSCHHHHHHHHHHHHTSC-C--BTTCCHHHHHHHHHHHHHTTC------EEEECSCHH----------------HHCCSS
T ss_pred CCCHHHHHHHHHHHhccc-C--CCccHHHHHHHHHHHHHHCCC------EEEEecccc----------------ccCCCc
Confidence 367899999999999973 3 344557899999999999983 444431100 000135
Q ss_pred ceEEEEEcCCCCCCCCCCeEEEeecccccCC--------------CCCC----CCChhHHHHHHHHHHHHHhcCCCCCCc
Q 005255 163 NHIVLRILPKYASEAGENAILVSSHIDTVSA--------------GEGA----GDCSSCVAVMLELARVMSQWAHEFKNA 224 (706)
Q Consensus 163 ~NVi~~i~g~~~~~~~~~~Vll~aH~DSv~~--------------~pGA----~Dd~sgva~~LE~ar~L~~~~~~p~~~ 224 (706)
.|++++++|+ +++.+.|++.+|+|+||. ++|+ .||+.|++++|++++.|.+.+. ++++
T Consensus 57 ~nv~a~~~g~---~~~~~~v~l~aH~D~vp~~~~~~p~~~~g~~~g~G~~~~g~D~k~g~a~~l~a~~~l~~~~~-~~~~ 132 (373)
T 3gb0_A 57 GNLICTLPAT---KDGVDTIYFTSHMDTVVPGNGIKPSIKDGYIVSDGTTILGADDKAGLASMFEAIRVLKEKNI-PHGT 132 (373)
T ss_dssp CCEEEEECCS---STTCCCEEEEEECCBCSSCSSCCCEEETTEEECCSSSCCCHHHHHHHHHHHHHHHHHHHTTC-CCCC
T ss_pred eeEEEEecCC---CCCCCEEEEEEECcccCCCCCcCcEEECCEEECCCccccCcccHHHHHHHHHHHHHHHhcCC-CCCC
Confidence 7999999874 134578999999999974 3576 5999999999999999998754 6899
Q ss_pred EEEEEeCCCCCCCcChHHHHhcCCccCCceEEEEeecCc
Q 005255 225 VIFLFNTGEEEGLNGAHSFVTQHPWSTTIRVAVDLEAMG 263 (706)
Q Consensus 225 I~flf~~~EE~gl~GS~~f~~~~~~~~~v~a~iNLD~~G 263 (706)
|.|+|..+||.|..|++.+..+. .+....+++|..+
T Consensus 133 v~~~~~~~EE~g~~Ga~~~~~~~---~~~~~~~~~~~~~ 168 (373)
T 3gb0_A 133 IEFIITVGEESGLVGAKALDRER---ITAKYGYALDSDG 168 (373)
T ss_dssp EEEEEESCGGGTSHHHHHSCGGG---CCCSEEEEEEECS
T ss_pred EEEEEEeccccCchhhhhhCHHh---cCCCEEEEEcCCC
Confidence 99999999999999999885322 2345666666543
No 32
>2v8h_A Beta-alanine synthase; amidohydrolase, alpha and beta protein, DI-zinc center, COMP N-carbamyl-beta-alanine, hydrolase; HET: BCN; 2.0A {Saccharomyces kluyveri} PDB: 2v8d_A* 2vl1_A 2v8g_A 2v8v_A 1r43_A 1r3n_A
Probab=99.35 E-value=4.2e-12 Score=142.39 Aligned_cols=128 Identities=16% Similarity=0.154 Sum_probs=105.6
Q ss_pred CCCHHHHHHHHHHH-HcCCC--------------CCCCCHHHHHHHHHHHHHHHhhccccCCcceEEEEeeeccCCCccc
Q 005255 83 GFSELEAMKHVKAL-TQLGP--------------HAVGSDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRV 147 (706)
Q Consensus 83 ~fs~erA~~~L~~L-~~igp--------------R~~gS~~~~~a~~yL~~~l~~ig~~~~~~~~vevd~f~~~~g~~~~ 147 (706)
+.+.+++++.|++| ++|+. |+..|.++.++++||.++++++|. +++++
T Consensus 28 ~~~~~~~~~~l~~L~v~i~s~s~~~~~~~~~g~~r~~~s~~e~~~~~~l~~~l~~~G~------~v~~d----------- 90 (474)
T 2v8h_A 28 SIASGRLNQTILETGSQFGGVARWGQESHEFGMRRLAGTALDGAMRDWFTNECESLGC------KVKVD----------- 90 (474)
T ss_dssp CCCTTHHHHHHHHHHHHTTEECCCSSSTTCCEECCCTTSHHHHHHHHHHHHHHHHTTC------EEEEB-----------
T ss_pred cCCHHHHHHHHHHHhhhcCCccccccccccCCcccCCCCHHHHHHHHHHHHHHHHcCC------EEEEe-----------
Confidence 46778999999999 98843 233477788999999999999983 44432
Q ss_pred ccccccCccccccccceEEEEEcCCCCCCCCCCeEEEeecccccCCCCCCCCChhHHHHHHHHHHHHHhcCCCCCCcEEE
Q 005255 148 GTGVFKGKTLIYSDLNHIVLRILPKYASEAGENAILVSSHIDTVSAGEGAGDCSSCVAVMLELARVMSQWAHEFKNAVIF 227 (706)
Q Consensus 148 ~g~~~~~~~~~y~~~~NVi~~i~g~~~~~~~~~~Vll~aH~DSv~~~pGA~Dd~sgva~~LE~ar~L~~~~~~p~~~I~f 227 (706)
+..|++++++|++ +.+.|++.+|+|+||.. |..|++.|++++|++++.|.+.+.+++++|.|
T Consensus 91 -------------~~gnvia~~~g~~----~~~~i~l~~H~DtVp~~-g~~D~k~gvaa~L~a~~~L~~~~~~~~~~v~l 152 (474)
T 2v8h_A 91 -------------KIGNMFAVYPGKN----GGKPTATGSHLDTQPEA-GKYDGILGVLAGLEVLRTFKDNNYVPNYDVCV 152 (474)
T ss_dssp -------------TTCCEEEEECCSS----CCSCEEEEECCCCCSSB-CSSTTHHHHHHHHHHHHHHHHHTCCCSSCEEE
T ss_pred -------------cCceEEEEECCCC----CCCeEEEEEecccCCCC-CCcCCHHHHHHHHHHHHHHHHcCCCCCCCEEE
Confidence 2358999998641 33479999999999954 67899999999999999999987788999999
Q ss_pred EEeCCCCC-----CCcChHHHHh
Q 005255 228 LFNTGEEE-----GLNGAHSFVT 245 (706)
Q Consensus 228 lf~~~EE~-----gl~GS~~f~~ 245 (706)
+|+.+||. |+.||+.+.+
T Consensus 153 if~~dEE~~~~~~g~~Gs~~l~~ 175 (474)
T 2v8h_A 153 VVWFNAEGARFARSCTGSSVWSH 175 (474)
T ss_dssp EECTTCSCSSSSCTTHHHHHHTT
T ss_pred EEECCccCCCCCCCcccHHHHHh
Confidence 99999998 7789999974
No 33
>3tx8_A Succinyl-diaminopimelate desuccinylase; peptidase, structural genomics, joint center for structural JCSG; 2.97A {Corynebacterium glutamicum}
Probab=99.33 E-value=6e-12 Score=135.92 Aligned_cols=139 Identities=22% Similarity=0.213 Sum_probs=107.9
Q ss_pred HHHHHHHHHHHcCCCCCCCCHHHHHHHHHHHHHHHhhccccCCcceEEEEeeeccCCCcccccccccCccccccccceEE
Q 005255 87 LEAMKHVKALTQLGPHAVGSDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYSDLNHIV 166 (706)
Q Consensus 87 erA~~~L~~L~~igpR~~gS~~~~~a~~yL~~~l~~ig~~~~~~~~vevd~f~~~~g~~~~~g~~~~~~~~~y~~~~NVi 166 (706)
+++.+.+++|.++ |-+ |..+.++.+||.++|+++|.+ .++++. ...|++
T Consensus 13 ~~~~~~~~~l~~~-ps~--s~~e~~~~~~l~~~l~~~G~~-----~~~~~~-----------------------~~~~~~ 61 (369)
T 3tx8_A 13 GDPIVLTQRLVDI-PSP--SGQEKQIADEIEDALRNLNLP-----GVEVFR-----------------------FNNNVL 61 (369)
T ss_dssp SCHHHHHHHHHSS-CCB--TTCTHHHHHHHHHHHHTTTCT-----TCEEEE-----------------------ETTEEE
T ss_pred HHHHHHHHHHhcC-CCC--CccHHHHHHHHHHHHHhcCCC-----CcEEec-----------------------cCCcEE
Confidence 4678899999986 333 344568899999999999731 123321 125899
Q ss_pred EEEcCCCCCCCCCCeEEEeecccccCC--------------CCCCCCChhHHHHHHHHHHHHHhcCCCCCCcEEEEEeCC
Q 005255 167 LRILPKYASEAGENAILVSSHIDTVSA--------------GEGAGDCSSCVAVMLELARVMSQWAHEFKNAVIFLFNTG 232 (706)
Q Consensus 167 ~~i~g~~~~~~~~~~Vll~aH~DSv~~--------------~pGA~Dd~sgva~~LE~ar~L~~~~~~p~~~I~flf~~~ 232 (706)
++++++ +.+.|++.+|+|+||. ++|+.||++|++++|++++.|.+. .+++++|.|+|..+
T Consensus 62 a~~~~~-----~~~~v~l~~H~D~vp~~~~~~~~~~~g~~~g~G~~D~K~~~a~~l~a~~~l~~~-~~~~~~v~~~~~~~ 135 (369)
T 3tx8_A 62 ARTNRG-----LASRVMLAGHIDTVPIADNLPSRVEDGIMYGCGTVDMKSGLAVYLHTFATLATS-TELKHDLTLIAYEC 135 (369)
T ss_dssp EECCCC-----CSCEEEEEEECCBSCCCSCCSCEECSSEEESSSTTTTHHHHHHHHHHHHHHTSC-TTCCSEEEEEEECC
T ss_pred EEecCC-----CCCeEEEEcccCccCCCCCCCCeEECCEEEcCCcccchHHHHHHHHHHHHHHhh-cCCCccEEEEEEec
Confidence 998763 3578999999999986 389999999999999999999864 46789999999999
Q ss_pred CCCCC--cChHHHHhcCCccCCceEEEEeecC
Q 005255 233 EEEGL--NGAHSFVTQHPWSTTIRVAVDLEAM 262 (706)
Q Consensus 233 EE~gl--~GS~~f~~~~~~~~~v~a~iNLD~~ 262 (706)
||.|. .|++.++++++...+...+++.|..
T Consensus 136 EE~g~~~~G~~~~~~~~~~~~~~~~~i~~ep~ 167 (369)
T 3tx8_A 136 EEVADHLNGLGHIRDEHPEWLAADLALLGEPT 167 (369)
T ss_dssp CSSCTTSCHHHHHHHHCGGGGCCSEEEECCCC
T ss_pred cccCcccccHHHHHHhcccccCCCEEEEeCCC
Confidence 99997 7999999776433345677777754
No 34
>1z2l_A Allantoate amidohydrolase; ALLC, purine cataboli allantoin utilization, structural genomics, PSI, Pro structure initiative; HET: 1AL; 2.25A {Escherichia coli} SCOP: c.56.5.4 d.58.19.1 PDB: 2imo_A
Probab=99.33 E-value=5.6e-12 Score=138.76 Aligned_cols=127 Identities=16% Similarity=0.065 Sum_probs=102.7
Q ss_pred CHHHHHHHHHHHHcCCCC-------CCCCHHHHHHHHHHHHHHHhhccccCCcceEEEEeeeccCCCcccccccccCccc
Q 005255 85 SELEAMKHVKALTQLGPH-------AVGSDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTL 157 (706)
Q Consensus 85 s~erA~~~L~~L~~igpR-------~~gS~~~~~a~~yL~~~l~~ig~~~~~~~~vevd~f~~~~g~~~~~g~~~~~~~~ 157 (706)
+.+++++.|++|++|+.. +..+.++.++++||.++++++|. +++.|
T Consensus 7 ~~~~~~~~l~~lv~i~s~s~~g~~~~~~s~~e~~~~~~i~~~l~~~G~------~v~~~--------------------- 59 (423)
T 1z2l_A 7 FRQAIEETLPWLSSFGADPAGGMTRLLYSPEWLETQQQFKKRMAASGL------ETRFD--------------------- 59 (423)
T ss_dssp HHHHHHHHHHHHHHTTBCTTSSBCCCTTSHHHHHHHHHHHHHHHHTTC------EEEEC---------------------
T ss_pred cHHHHHHHHHHHHhcCCCCCCCcccCcCCHHHHHHHHHHHHHHHHcCC------EEEEe---------------------
Confidence 357899999999987542 22346777999999999999983 34432
Q ss_pred cccccceEEEEEcCCCCCCCCCCeEEEeecccccCCCCCCCCChhHHHHHHHHHHHHHhcCCCCCCcEEEEEeCCCCC--
Q 005255 158 IYSDLNHIVLRILPKYASEAGENAILVSSHIDTVSAGEGAGDCSSCVAVMLELARVMSQWAHEFKNAVIFLFNTGEEE-- 235 (706)
Q Consensus 158 ~y~~~~NVi~~i~g~~~~~~~~~~Vll~aH~DSv~~~pGA~Dd~sgva~~LE~ar~L~~~~~~p~~~I~flf~~~EE~-- 235 (706)
...|++++++|+ ++..+.|++.+|+|+||. .|..|++.|++++|++++.|.+.+.+++++|+|+|+.+||.
T Consensus 60 ---~~gnv~a~~~g~---~~~~~~i~l~~H~D~Vp~-~g~~D~k~g~a~~l~a~~~l~~~~~~~~~~v~~i~~~~EE~~~ 132 (423)
T 1z2l_A 60 ---EVGNLYGRLNGT---EYPQEVVLSGSHIDTVVN-GGNLDGQFGALAAWLAIDWLKTQYGAPLRTVEVVAMAEEEGSR 132 (423)
T ss_dssp ---TTSCEEEEECCS---SEEEEEEEEEEECCCCTT-BCSSTTHHHHHHHHHHHHHHHHHHCSCSEEEEEEEESCSSCCS
T ss_pred ---cCCcEEEEEcCC---CCCCCEEEEEEecCCCCC-CCccCCHHHHHHHHHHHHHHHHcCCCCCCCEEEEEEcCccccc
Confidence 234999999864 122378999999999995 48899999999999999999987777899999999999998
Q ss_pred ---CCcChHHHHh
Q 005255 236 ---GLNGAHSFVT 245 (706)
Q Consensus 236 ---gl~GS~~f~~ 245 (706)
|+.||+.+..
T Consensus 133 ~~~g~~Gs~~~~~ 145 (423)
T 1z2l_A 133 FPYVFWGSKNIFG 145 (423)
T ss_dssp SSCSCHHHHHHTT
T ss_pred cCCCcccHHHHHc
Confidence 5679999885
No 35
>1vho_A Endoglucanase; structural genomics, unknown function; HET: MSE; 1.86A {Thermotoga maritima} SCOP: b.49.3.1 c.56.5.4
Probab=99.31 E-value=4.1e-11 Score=128.66 Aligned_cols=226 Identities=14% Similarity=0.172 Sum_probs=148.1
Q ss_pred HHHHHHHHHHcCCCCCCCCHHHHHHHHHHHHHHHhhccccCCcceEEEEeeeccCCCcccccccccCccccccccceEEE
Q 005255 88 EAMKHVKALTQLGPHAVGSDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYSDLNHIVL 167 (706)
Q Consensus 88 rA~~~L~~L~~igpR~~gS~~~~~a~~yL~~~l~~ig~~~~~~~~vevd~f~~~~g~~~~~g~~~~~~~~~y~~~~NVi~ 167 (706)
+..+.|++|+++ |.+.|. ++.+++||.+++++++. ++++| +..|+++
T Consensus 6 ~~~~~l~~Lv~~-~s~sg~--e~~~~~~l~~~l~~~g~------~~~~d------------------------~~gnlia 52 (346)
T 1vho_A 6 ETGKLLMELSNL-DGPSGY--ETNVVSYIKSVIEPFVD------EAKTT------------------------RHGSLIG 52 (346)
T ss_dssp CHHHHHHHHHHS-CCBTTC--CHHHHHHHHHHHGGGCS------EEEEC------------------------TTSCEEE
T ss_pred HHHHHHHHHHcC-CCCCcc--hHHHHHHHHHHHHhhCC------EEEEe------------------------cCCcEEE
Confidence 456789999987 445443 35689999999999983 34442 3469999
Q ss_pred EEcCCCCCCCCCCeEEEeecccccCC---------------------------------C--------------------
Q 005255 168 RILPKYASEAGENAILVSSHIDTVSA---------------------------------G-------------------- 194 (706)
Q Consensus 168 ~i~g~~~~~~~~~~Vll~aH~DSv~~---------------------------------~-------------------- 194 (706)
+++|+ +.+.+++++|+|+|+. .
T Consensus 53 ~~~g~-----~~~~i~l~aH~DtV~~~v~~i~~G~l~~~~~Gg~~~~~~~g~~~~~~~~~g~~~G~i~~~~~h~~~~~~~ 127 (346)
T 1vho_A 53 YKKGK-----GIGKLAFFAHVDEIGFVVSKVEGQFARLEPVGGVDPKVVYASKVRIYTKNGIERGVIGMLAPHLQDSESR 127 (346)
T ss_dssp EECCS-----SSCEEEEEEECCBCCEEEEEEETTEEEEEEC--------CCCEEEEEETTEEEEEETTCCCSCCCCHHHH
T ss_pred EEcCC-----CCceEEEEecCcccceEeEEecCCeEEEEEeCCccCcccccCEEEEEcCCCcEEEEEcCCCcccCchhhc
Confidence 98764 2368999999999941 0
Q ss_pred ---------------------CC-------------------CCCChhHHHHHHHHHHHHHhcCCCCCCcEEEEEeCCCC
Q 005255 195 ---------------------EG-------------------AGDCSSCVAVMLELARVMSQWAHEFKNAVIFLFNTGEE 234 (706)
Q Consensus 195 ---------------------pG-------------------A~Dd~sgva~~LE~ar~L~~~~~~p~~~I~flf~~~EE 234 (706)
.| +.||+.|+++++|+++.+.+.+ ++.++.++|+.+||
T Consensus 128 ~~~~~~~~l~id~g~~~eei~~G~~~~~~~~~~~~g~~i~g~~~D~r~g~aa~l~al~~l~~~~--~~~~~~~~~t~~EE 205 (346)
T 1vho_A 128 KKVPTYDEIFVDLSLCERGVRVGDIAVIDQTAFETNGKVVGKALDNRASCGVLVKVLEFLKRYD--HPWDVYVVFSVQEE 205 (346)
T ss_dssp HTSCCTTCCEEEGGGSSSCCCTTCEEEECCCCEEETTEEEETTHHHHHHHHHHHHHHHHHTTCC--CSSEEEEEEECTTS
T ss_pred ccCCChhHeEEEeccchhcCCCCCEEEEccchhhhcCeEEeccCccHHHHHHHHHHHHHhhhcC--CCceEEEEEECCcc
Confidence 11 4799999999999999997643 56799999999999
Q ss_pred CCCcChHHHHhcCCccCCceEEEEeecCcCCCCcc----ccccC--------CCHHHHHHHHHHccCCCCcccccccccC
Q 005255 235 EGLNGAHSFVTQHPWSTTIRVAVDLEAMGIGGRSA----LFQAG--------PNLWAVENFAAVAKYPSGQIIGQDLFAS 302 (706)
Q Consensus 235 ~gl~GS~~f~~~~~~~~~v~a~iNLD~~G~gg~~~----lfq~g--------~~~~li~~y~~~a~~p~~~~l~~e~f~~ 302 (706)
.|+.|++.... .. +...++.+|....+.... -...| .++.+.+...++++. .+.........
T Consensus 206 vG~~Ga~~~~~--~i--~~~~~i~~D~~~~~~~~~~~~~~~~~g~~i~~~~~~~~~l~~~~~~~a~~-~gi~~~~~~~~- 279 (346)
T 1vho_A 206 TGCLGALTGAY--EI--NPDAAIVMDVTFASEPPFSDHIELGKGPVIGLGPVVDRNLVQKIIEIAKK-HNVSLQEEAVG- 279 (346)
T ss_dssp SSHHHHHHTTC--CC--CCSEEEEEEEECCCCTTSCCCCCTTSCCEEECSTTSCHHHHHHHHHHHHH-TTCCCEEESSC-
T ss_pred cchhhHHHHhc--cc--CCCEEEEeecccccCCCCCcccccCCCceEEeCCcCCHHHHHHHHHHHHH-CCCCEEEEeCC-
Confidence 99999886542 11 224567777765532100 01112 356666666555432 12111111110
Q ss_pred CCCCCCCchHHHhh-cCCCeEEEEEeecCCCCCCCcCCCcCCCCHHHHHHHHHHHHHHHHHHhcC
Q 005255 303 GVFETATDFQVYTE-VAGLSGLDFAYTDKSAVYHTKNDRLDLLKPGSLQHLGENMLDFLLQTASS 366 (706)
Q Consensus 303 g~ips~TD~~~F~~-~~GiPgld~a~~~~~~~YHT~~Dt~d~id~~sLq~~g~~~l~ll~~la~~ 366 (706)
-+.+||...+.. ..|+|.+++.-- .. ..|++ .|.++.+.++...+.+..++..++..
T Consensus 280 --g~ggsDa~~~~~~~~gipt~~lg~~-~~-~~Hs~---~E~~~~~dl~~~~~ll~~~~~~~~~~ 337 (346)
T 1vho_A 280 --GRSGTETDFVQLVRNGVRTSLISIP-LK-YMHTP---VEMVDPRDVEELARLLSLVAVELEVE 337 (346)
T ss_dssp --CC----CTTHHHHHTTCEEEEEEEE-CB-STTST---TEEECHHHHHHHHHHHHHHHHHCC--
T ss_pred --CCCCchHHHHHHhCCCCcEEEEehh-hc-ccccH---HHhcCHHHHHHHHHHHHHHHHHhhhh
Confidence 125789888842 379999986443 33 38987 56788999999999999999886653
No 36
>1ylo_A Hypothetical protein SF2450; structural genomics, MCSG, PSI, structure initiative; 2.15A {Shigella flexneri 2a str} SCOP: b.49.3.1 c.56.5.4
Probab=99.29 E-value=3.9e-11 Score=128.69 Aligned_cols=220 Identities=17% Similarity=0.218 Sum_probs=147.8
Q ss_pred HHHHHHHcCCCCCCCCHHHHHHHHHHHHHHHhhccccCCcceEEEEeeeccCCCcccccccccCccccccccceEEEEEc
Q 005255 91 KHVKALTQLGPHAVGSDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYSDLNHIVLRIL 170 (706)
Q Consensus 91 ~~L~~L~~igpR~~gS~~~~~a~~yL~~~l~~ig~~~~~~~~vevd~f~~~~g~~~~~g~~~~~~~~~y~~~~NVi~~i~ 170 (706)
+.|++|+++ |.+.|. ++++++||.+++++++. ++++| +..|++++++
T Consensus 7 ~~l~~Lv~~-~s~sg~--e~~~~~~l~~~l~~~g~------~v~~d------------------------~~gnlia~~~ 53 (348)
T 1ylo_A 7 SLLKALSEA-DAIASS--EQEVRQILLEEAARLQK------EVRFD------------------------GLGSVLIRLN 53 (348)
T ss_dssp HHHHHHHHS-CCBTTB--CHHHHHHHHHHHHHTTC------CEEEC------------------------TTCCEEEECC
T ss_pred HHHHHHHcC-CCCCCc--hHHHHHHHHHHHHhhCC------EEEEe------------------------cCCCEEEEec
Confidence 678999987 445443 34689999999999983 34433 2358999887
Q ss_pred CCCCCCCCCCeEEEeecccccC----------------------------------------------------------
Q 005255 171 PKYASEAGENAILVSSHIDTVS---------------------------------------------------------- 192 (706)
Q Consensus 171 g~~~~~~~~~~Vll~aH~DSv~---------------------------------------------------------- 192 (706)
|+ ..+.|++++|+|+|+
T Consensus 54 g~-----~~~~vll~aH~DtV~~~v~~i~~~G~~~~~~~Gg~~~~~~~g~~v~~~~~~G~~~~h~~~~~~~~~~~~~l~i 128 (348)
T 1ylo_A 54 ES-----TGPKVMICAHMDEVGFMVRSISREGAIDVLPVGNVRMAARQLQPVRITTREECKIPGLLDGDRQGNDVSAMRV 128 (348)
T ss_dssp CC-----SSCEEEEEEECCCCEEEEEEECTTCCEEEEEESCCCGGGSSSEEEEEECTTCCEEEEEEEEEEETTEEEEEEE
T ss_pred CC-----CCceEEEEEcCCccceEEEEECCCCeEEEEecCCcchhhccCCEEEEEeCCCCCCcchhhhhccCCChhHEEE
Confidence 53 246799999999995
Q ss_pred --------------CCCC--------------------CCCChhHHHHHHHHHHHHHhcCCCCCCcEEEEEeCCCCCCCc
Q 005255 193 --------------AGEG--------------------AGDCSSCVAVMLELARVMSQWAHEFKNAVIFLFNTGEEEGLN 238 (706)
Q Consensus 193 --------------~~pG--------------------A~Dd~sgva~~LE~ar~L~~~~~~p~~~I~flf~~~EE~gl~ 238 (706)
...| +.||+.|+++++++++.+.+. .++.++.++|+.+||.|+.
T Consensus 129 d~G~~s~~~~~~~gi~~g~~i~~~~~~~~~~~~~~~~~~~D~k~g~aa~l~al~~l~~~--~~~~~~~~~~t~~EEvG~~ 206 (348)
T 1ylo_A 129 DIGARTYDEVMQAGIRPGDRVTFDTTFQVLPHQRVMGKAFDDRLSCYLLVTLLRELHDA--ELPAEVWLVASSSEEVGLR 206 (348)
T ss_dssp ECSCCSHHHHHHTTCCTTCEEEECCCCEEETTTEEEETTHHHHHHHHHHHHHHHHHTTC--CCSSEEEEEEESCCTTSSH
T ss_pred EecCCCHHHHHHcCCCCCCEEEEccccEEecCCEEEecCcccHHHHHHHHHHHHHhhhc--CCCceEEEEEEcccccchh
Confidence 0112 479999999999999998764 3568999999999999999
Q ss_pred ChHHHHhcCCccCCceEEEEeecCcCCCCc---------------cccc-cC--CCHHHHHHHHHHccCCCCcccccccc
Q 005255 239 GAHSFVTQHPWSTTIRVAVDLEAMGIGGRS---------------ALFQ-AG--PNLWAVENFAAVAKYPSGQIIGQDLF 300 (706)
Q Consensus 239 GS~~f~~~~~~~~~v~a~iNLD~~G~gg~~---------------~lfq-~g--~~~~li~~y~~~a~~p~~~~l~~e~f 300 (706)
|++...... .....+++|+...+... .... .. .++.+.+...++++. .+.....+..
T Consensus 207 Ga~~~~~~i----~~~~~i~~D~~~~~~~~~~~~~~~~~~~~G~~i~~~~~~~~~~~~l~~~~~~~a~~-~gi~~~~~~~ 281 (348)
T 1ylo_A 207 GGQTATRAV----SPDVAIVLDTACWAKNFDYGAANHRQIGNGPMLVLSDKSLIAPPKLTAWIETVAAE-IGVPLQADMF 281 (348)
T ss_dssp HHHHHHHHH----CCSEEEEECCCCCSSTTCCSTTCCCCTTSCCEEEEECSSCBCCHHHHHHHHHHHHH-HTCCCEEEEC
T ss_pred HHHHhhccc----CCCEEEEEeccccCCCCCCCccccccCCCCcEEEEeCCCCCCCHHHHHHHHHHHHH-cCCCeEEeec
Confidence 987655321 22467888887653211 1110 11 255666655554321 1111111111
Q ss_pred cCCCCCCCCchHHHhh-cCCCeEEEEEeecCCCCCCCcCCCcCCCCHHHHHHHHHHHHHHHHHHh
Q 005255 301 ASGVFETATDFQVYTE-VAGLSGLDFAYTDKSAVYHTKNDRLDLLKPGSLQHLGENMLDFLLQTA 364 (706)
Q Consensus 301 ~~g~ips~TD~~~F~~-~~GiPgld~a~~~~~~~YHT~~Dt~d~id~~sLq~~g~~~l~ll~~la 364 (706)
.+.+||...+.. ..|+|.+++. .+.. ..||+ .|.++.+.+....+.+.+++..++
T Consensus 282 ----~~ggsDa~~~~~~~~gipt~~lg-~~~~-~~Hs~---~E~~~~~d~~~~~~ll~~~~~~l~ 337 (348)
T 1ylo_A 282 ----SNGGTDGGAVHLTGTGVPTLVMG-PATR-HGHCA---ASIADCRDILQMEQLLSALIQRLT 337 (348)
T ss_dssp ----SSCCCHHHHHHTSTTCCCEEEEE-CCCB-SCSSS---CEEEEHHHHHHHHHHHHHHHHTCC
T ss_pred ----CCCcchHHHHHHhcCCCCEEEEC-cccC-cCCCc---ceEeeHHHHHHHHHHHHHHHHHhh
Confidence 246899998853 2699999764 3333 48987 567789999999998888888654
No 37
>2rb7_A Peptidase, M20/M25/M40 family; YP_387682.1, CO-catalytic metallopeptidase, peptidase family M20/M25/M40, structural genomics; HET: MSE PGE PG4; 1.60A {Desulfovibrio desulfuricans subsp}
Probab=99.28 E-value=1e-11 Score=134.33 Aligned_cols=139 Identities=22% Similarity=0.251 Sum_probs=104.8
Q ss_pred CHHHHHHHHHHHHcCCCCCCCC-HHHHHHHHHHHHHHHhhccccCCcceEEEEeeeccCCCcccccccccCccccccccc
Q 005255 85 SELEAMKHVKALTQLGPHAVGS-DALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYSDLN 163 (706)
Q Consensus 85 s~erA~~~L~~L~~igpR~~gS-~~~~~a~~yL~~~l~~ig~~~~~~~~vevd~f~~~~g~~~~~g~~~~~~~~~y~~~~ 163 (706)
+.+++.+.+++|.++ |-+... .++.++.+||.++++++|. +++.+ ..
T Consensus 4 ~~~~~~~~l~~l~~i-ps~s~~~~~e~~~~~~l~~~l~~~G~------~~~~~-------------------------~~ 51 (364)
T 2rb7_A 4 SMQHIVELTSDLIRF-PSMHSRPEQISRCAGFIMDWCAQNGI------HAERM-------------------------DH 51 (364)
T ss_dssp HHHHHHHHHHHHHTS-CCCTTCHHHHHHHHHHHHHHHHHTTC------CCEEE-------------------------EE
T ss_pred cHHHHHHHHHHHHcC-CCCCCCcchHHHHHHHHHHHHHHcCC------eEEEe-------------------------cC
Confidence 357889999999997 333333 3455899999999999984 33332 14
Q ss_pred eEEEEEcCCCCCCCCCCeEEEeecccccCC---------------CCCCCCChhHHHHHHHHHHHHHhcCCCC---CCc-
Q 005255 164 HIVLRILPKYASEAGENAILVSSHIDTVSA---------------GEGAGDCSSCVAVMLELARVMSQWAHEF---KNA- 224 (706)
Q Consensus 164 NVi~~i~g~~~~~~~~~~Vll~aH~DSv~~---------------~pGA~Dd~sgva~~LE~ar~L~~~~~~p---~~~- 224 (706)
|++++++++. ..+.+.|++.+|+|+||. ++|+.|+++|++++|++++.|.+.+.++ +++
T Consensus 52 ~~~~~~~~~~--~~~~~~i~l~aH~D~vp~~~~p~~~~~~~g~~~grG~~D~k~~~a~~l~a~~~l~~~~~~~~~~~g~~ 129 (364)
T 2rb7_A 52 DGIPSVMVLP--EKGRAGLLLMAHIDVVDAEDDLFVPRVENDRLYGRGANDDKYAVALGLVMFRDRLNALKAAGRSQKDM 129 (364)
T ss_dssp TTEEEEEECS--BTTEEEEEEEEECCCCCCCGGGGSCEEETTEEESTTTTTTHHHHHHHHHHHHHHHHHHHHTTCCGGGC
T ss_pred CCceEEEEEc--CCCCCeEEEECccCcCCCCCCCCccEEECCEEEecccccccHHHHHHHHHHHHHHHhCCCCcccCCCc
Confidence 5667776421 124578999999999975 4789999999999999999999865555 457
Q ss_pred -EEEEEeCCCCC-CCcChHHHHhcCCccCCceEEEEeec
Q 005255 225 -VIFLFNTGEEE-GLNGAHSFVTQHPWSTTIRVAVDLEA 261 (706)
Q Consensus 225 -I~flf~~~EE~-gl~GS~~f~~~~~~~~~v~a~iNLD~ 261 (706)
|.|+|+.+||. |+.|++.++++. +..+++++|.
T Consensus 130 ~v~~~~~~~EE~~g~~G~~~~~~~~----~~d~~i~~d~ 164 (364)
T 2rb7_A 130 ALGLLITGDEEIGGMNGAAKALPLI----RADYVVALDG 164 (364)
T ss_dssp CEEEEEESCGGGTSTTTHHHHGGGC----EEEEEEECSS
T ss_pred cEEEEEEeccccCchhhHHHHHhcC----CCCEEEEccC
Confidence 99999999996 678999998654 4567777664
No 38
>1lfw_A PEPV; hydrolase, dipeptidase; HET: AEP; 1.80A {Bacteria} SCOP: c.56.5.4 d.58.19.1
Probab=99.28 E-value=4.8e-11 Score=133.11 Aligned_cols=127 Identities=17% Similarity=0.191 Sum_probs=100.7
Q ss_pred CHHHHHHHHHHHHcCCCCCCCCH----------HHHHHHHHHHHHHHhhccccCCcceEEEEeeeccCCCcccccccccC
Q 005255 85 SELEAMKHVKALTQLGPHAVGSD----------ALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKG 154 (706)
Q Consensus 85 s~erA~~~L~~L~~igpR~~gS~----------~~~~a~~yL~~~l~~ig~~~~~~~~vevd~f~~~~g~~~~~g~~~~~ 154 (706)
..+++++.+++|.++ |...+.+ +..++.+||.++++++|. +++..
T Consensus 12 ~~~~~~~~l~~l~~i-ps~s~~~~~~~~~p~~~~~~~~~~~l~~~l~~~G~------~~~~~------------------ 66 (470)
T 1lfw_A 12 KKDAILKDLEELIAI-DSSEDLENATEEYPVGKGPVDAMTKFLSFAKRDGF------DTENF------------------ 66 (470)
T ss_dssp THHHHHHHHHHHHTS-CCBCCGGGCCSSSTTCHHHHHHHHHHHHHHHHTTC------EEEEE------------------
T ss_pred hHHHHHHHHHHHcCC-CCcCCCccccccCCCcHHHHHHHHHHHHHHHHcCC------eEEEe------------------
Confidence 357899999999997 4443322 456899999999999983 33321
Q ss_pred ccccccccceEEEEEcCCCCCCCCCCeEEEeecccccCC--------------------CCCCCCChhHHHHHHHHHHHH
Q 005255 155 KTLIYSDLNHIVLRILPKYASEAGENAILVSSHIDTVSA--------------------GEGAGDCSSCVAVMLELARVM 214 (706)
Q Consensus 155 ~~~~y~~~~NVi~~i~g~~~~~~~~~~Vll~aH~DSv~~--------------------~pGA~Dd~sgva~~LE~ar~L 214 (706)
...++++++ |+ ..+.|++.+|+|+||. ++|+.||+.|++++|++++.|
T Consensus 67 ------~~~~~~~~~-g~-----~~~~i~l~~H~D~vp~~~~w~~~Pf~~~~~~~g~l~grG~~D~K~~~a~~l~a~~~l 134 (470)
T 1lfw_A 67 ------ANYAGRVNF-GA-----GDKRLGIIGHMDVVPAGEGWTRDPFKMEIDEEGRIYGRGSADDKGPSLTAYYGMLLL 134 (470)
T ss_dssp ------TTTEEEEEE-CC-----CSSEEEEEEECCBCCCCSCCSSCTTSCEECTTCEEESTTSSSSHHHHHHHHHHHHHH
T ss_pred ------cCeEEEEEe-CC-----CCCeEEEEEeecccCCCCCccCCCcceeEeeCCEEECCCcccChHHHHHHHHHHHHH
Confidence 113566666 43 2478999999999873 367899999999999999999
Q ss_pred HhcCCCCCCcEEEEEeCCCCCCCcChHHHHhcCC
Q 005255 215 SQWAHEFKNAVIFLFNTGEEEGLNGAHSFVTQHP 248 (706)
Q Consensus 215 ~~~~~~p~~~I~flf~~~EE~gl~GS~~f~~~~~ 248 (706)
.+.+.+++++|+|+|+.+||.|..|++.+++++.
T Consensus 135 ~~~~~~~~~~i~~i~~~~EE~g~~G~~~~~~~~~ 168 (470)
T 1lfw_A 135 KEAGFKPKKKIDFVLGTNEETNWVGIDYYLKHEP 168 (470)
T ss_dssp HHHTCCCSSEEEEEEESCTTTTCHHHHHHHHHSC
T ss_pred HHcCCCCCCCEEEEEecCcccCCccHHHHHHhCc
Confidence 9887788999999999999999999999997654
No 39
>1vgy_A Succinyl-diaminopimelate desuccinylase; structural genomics, unknown function; HET: MSE; 1.90A {Neisseria meningitidis} SCOP: c.56.5.4 d.58.19.1
Probab=99.26 E-value=1.8e-11 Score=133.47 Aligned_cols=142 Identities=18% Similarity=0.226 Sum_probs=105.8
Q ss_pred CHHHHHHHHHHHHcCCCCCCCCHHHHHHHHHHHHHHHhhccccCCcceEEEEeeeccCCCcccccccccCccccccccce
Q 005255 85 SELEAMKHVKALTQLGPHAVGSDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYSDLNH 164 (706)
Q Consensus 85 s~erA~~~L~~L~~igpR~~gS~~~~~a~~yL~~~l~~ig~~~~~~~~vevd~f~~~~g~~~~~g~~~~~~~~~y~~~~N 164 (706)
+.++..+.+++|.++ |-. |..+.++.+||.++|+++|. +++... . .+..|
T Consensus 4 ~~~~~~~~l~~lv~~-ps~--s~~e~~~~~~l~~~l~~~G~------~~~~~~--~-------------------~~~~n 53 (393)
T 1vgy_A 4 TETQSLELAKELISR-PSV--TPDDRDCQKLMAERLHKIGF------AAEEMH--F-------------------GNTKN 53 (393)
T ss_dssp CCSHHHHHHHHHHTS-CCB--TTCCTTHHHHHHHHHHTTTC------EEEECC--B-------------------TTBCE
T ss_pred chHHHHHHHHHHhcC-CCC--CCCcHHHHHHHHHHHHHcCC------cEEEEe--c-------------------CCCcE
Confidence 446789999999986 332 33345689999999999983 343310 0 13579
Q ss_pred EEEEEcCCCCCCCCCCeEEEeecccccCC---------------------CCCCCCChhHHHHHHHHHHHHHhcCCCCCC
Q 005255 165 IVLRILPKYASEAGENAILVSSHIDTVSA---------------------GEGAGDCSSCVAVMLELARVMSQWAHEFKN 223 (706)
Q Consensus 165 Vi~~i~g~~~~~~~~~~Vll~aH~DSv~~---------------------~pGA~Dd~sgva~~LE~ar~L~~~~~~p~~ 223 (706)
+++++ |+ +.+.|++.+|+|+||. ++|+.||++|++++|++++.|.+.+.++++
T Consensus 54 v~a~~-g~-----~~~~i~l~~H~D~Vp~~~~~~w~~~Pf~~~~~~g~l~grG~~D~k~~~aa~l~a~~~l~~~~~~~~~ 127 (393)
T 1vgy_A 54 IWLRR-GT-----KAPVVCFAGHTDVVPTGPVEKWDSPPFEPAERDGRLYGRGAADMKTSIACFVTACERFVAKHPNHQG 127 (393)
T ss_dssp EEEEE-CS-----SSSEEEEEEECCBCCCCCGGGSSSCTTSCEEETTEEESTTTTTTHHHHHHHHHHHHHHHHHCTTCSS
T ss_pred EEEEE-CC-----CCCEEEEEcccCCcCCCCcccCCCCCCceEEECCEEEecCcccchHHHHHHHHHHHHHHHhcCCCCC
Confidence 99998 53 2478999999999985 368889999999999999999887777899
Q ss_pred cEEEEEeCCCCCC-CcChHHHHhcCCc-cCCceEEEEeecC
Q 005255 224 AVIFLFNTGEEEG-LNGAHSFVTQHPW-STTIRVAVDLEAM 262 (706)
Q Consensus 224 ~I~flf~~~EE~g-l~GS~~f~~~~~~-~~~v~a~iNLD~~ 262 (706)
+|+|+|+.+||.+ +.|++.+.+.... ..++.+++..|..
T Consensus 128 ~v~~~~~~~EE~~~~~Ga~~~~~~~~~~~~~~d~~i~~e~~ 168 (393)
T 1vgy_A 128 SIALLITSDEEGDALDGTTKVVDVLKARDELIDYCIVGEPT 168 (393)
T ss_dssp EEEEEEESCSSSCCTTSHHHHHHHHHHTTCCEEEEEECCCC
T ss_pred cEEEEEEeccccCCcCCHHHHHHHHHhcCcCCCEEEEeCCC
Confidence 9999999999985 6899988753221 1235566665543
No 40
>3rza_A Tripeptidase; phosphorylase/hydrolase-like, structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; HET: CIT PG4 PGE; 2.10A {Staphylococcus aureus subsp}
Probab=99.25 E-value=1.9e-11 Score=133.62 Aligned_cols=153 Identities=20% Similarity=0.238 Sum_probs=110.8
Q ss_pred CCCCCHHHHHHHHHHHHcCCCCCCCCHHHHHHHHHHHHHHHhhccccCCcceEEEEeeeccCCCcccccccccCcccccc
Q 005255 81 RRGFSELEAMKHVKALTQLGPHAVGSDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYS 160 (706)
Q Consensus 81 ~~~fs~erA~~~L~~L~~igpR~~gS~~~~~a~~yL~~~l~~ig~~~~~~~~vevd~f~~~~g~~~~~g~~~~~~~~~y~ 160 (706)
..+.+.++..+.+++|.++. .+ |..+.++++||.++|+++|. +++.+..... ...
T Consensus 18 ~~~~~~~~~~~~l~~L~~ip-s~--s~~E~~~~~~l~~~l~~~G~------~v~~~~~~~~----------------~~~ 72 (396)
T 3rza_A 18 QGMINEQRLLNTFLELVQID-SE--TGNESTIQPILKEKFIALGL------DVKEDEAAKH----------------PKL 72 (396)
T ss_dssp -CCSCHHHHHHHHHHHHTSC-CB--TTCTTTHHHHHHHHHHHTTC------EEEECSGGGS----------------TTC
T ss_pred EEeecHHHHHHHHHHHeecC-CC--CcCHHHHHHHHHHHHHHCCC------EEEEeccccc----------------cCC
Confidence 34678999999999999973 33 44456899999999999983 4444311000 001
Q ss_pred ccceEEEEEcCCCCCCCCCCeEEEeecccccCC---------------CCCC----CCChhHHHHHHHHHHHHHhcCCCC
Q 005255 161 DLNHIVLRILPKYASEAGENAILVSSHIDTVSA---------------GEGA----GDCSSCVAVMLELARVMSQWAHEF 221 (706)
Q Consensus 161 ~~~NVi~~i~g~~~~~~~~~~Vll~aH~DSv~~---------------~pGA----~Dd~sgva~~LE~ar~L~~~~~~p 221 (706)
...|++++++|+. ++.+.+.|++.+|+|+||. ++|+ .||++|++++|++++.|.+.+ .+
T Consensus 73 ~~~nvia~~~g~~-~~~~~~~i~l~aH~D~vp~g~~~~p~~~~~g~~~g~G~~~~g~D~k~g~a~~l~a~~~l~~~~-~~ 150 (396)
T 3rza_A 73 GANNLVCTMNSTI-EEGEVPKLYLTSHMDTVVPAINVKPIVKDDGYIYSDGTTILGADDKAGLAAMLEVLQVIKEQQ-IP 150 (396)
T ss_dssp SSCCEEEEECCCC-C---CCCEEEEEECCBCSSCSSCCCEECTTSEEECCSSSCCCHHHHHHHHHHHHHHHHHHHHT-CC
T ss_pred CCceEEEEECCcC-CCCCCCeEEEEEECCccCCCCCcceEEecCCEEECCCccccCcccHHHHHHHHHHHHHHHhcC-CC
Confidence 3579999998631 0134578999999999963 3566 499999999999999998875 36
Q ss_pred CCcEEEEEeCCCCCCCcChHHHHhcCCccCCceEEEEeecCc
Q 005255 222 KNAVIFLFNTGEEEGLNGAHSFVTQHPWSTTIRVAVDLEAMG 263 (706)
Q Consensus 222 ~~~I~flf~~~EE~gl~GS~~f~~~~~~~~~v~a~iNLD~~G 263 (706)
+.+|.|+|..+||.|..|++.+..+.. +....+++|..+
T Consensus 151 ~~~v~~~~~~~EE~g~~Ga~~~~~~~~---~~~~~~~~~~~~ 189 (396)
T 3rza_A 151 HGQIQFVITVGEESGLIGAKELNSELL---DADFGYAIDASA 189 (396)
T ss_dssp CCCEEEEEESCGGGTSHHHHHCCGGGC---CCSEEEEEEESS
T ss_pred CCCEEEEEEcccccccHhHhhhchhhc---ccceEEEEecCC
Confidence 789999999999999999998864321 234556666543
No 41
>1fno_A Peptidase T; metallo peptidase, protease, hydrolase; 2.40A {Salmonella typhimurium} SCOP: c.56.5.4 d.58.19.1 PDB: 1vix_A
Probab=99.25 E-value=1.3e-11 Score=135.71 Aligned_cols=139 Identities=16% Similarity=0.187 Sum_probs=103.7
Q ss_pred HHHHHHHHHHHcCCCCC-------CCCHHHHHHHHHHHHHHHhhccccCCcce-EEEEeeeccCCCcccccccccCcccc
Q 005255 87 LEAMKHVKALTQLGPHA-------VGSDALDRALQYVLAASQKIKESKHWEAD-VEVDFFHAKSGANRVGTGVFKGKTLI 158 (706)
Q Consensus 87 erA~~~L~~L~~igpR~-------~gS~~~~~a~~yL~~~l~~ig~~~~~~~~-vevd~f~~~~g~~~~~g~~~~~~~~~ 158 (706)
+++++.|++|+++..-. ..++++.++++||.++|+++|. + ++++
T Consensus 2 ~~~~~~l~~Lv~i~s~s~~~~~~~p~~~~e~~~~~~l~~~l~~~G~------~~~~~~---------------------- 53 (417)
T 1fno_A 2 DKLLERFLHYVSLDTQSKSGVRQVPSTEGQWKLLRLLKQQLEEMGL------VNITLS---------------------- 53 (417)
T ss_dssp CSHHHHHHHHHTSCCBCCSSCSSSSSSHHHHHHHHHHHHHHHHHTC------EEEEEC----------------------
T ss_pred hHHHHHHHHhEEecCCCCcccCCCCCCccHHHHHHHHHHHHHHcCC------CeEEEC----------------------
Confidence 35788899999874321 2234667999999999999983 3 3332
Q ss_pred ccccceEEEEEcCCCCCCCCCCeEEEeecccccCCC--------------------------------------------
Q 005255 159 YSDLNHIVLRILPKYASEAGENAILVSSHIDTVSAG-------------------------------------------- 194 (706)
Q Consensus 159 y~~~~NVi~~i~g~~~~~~~~~~Vll~aH~DSv~~~-------------------------------------------- 194 (706)
...|++++++|+. ..+.+.|++.+|+|+||..
T Consensus 54 --~~~nvia~~~g~~--~~~~~~i~l~aH~D~Vp~~~~~~~~p~~~~~~~g~~i~~~~g~~~~~~~~~~~~~~~~gd~~l 129 (417)
T 1fno_A 54 --EKGTLMATLPANV--EGDIPAIGFISHVDTSPDFSGKNVNPQIVENYRGGDIALGIGDEVLSPVMFPVLHQLLGQTLI 129 (417)
T ss_dssp --TTCCEEEEECCSS--CSCCCCEEEEEECCBCTTSCCSSCCCEEETTCCSSCEECSSSSCEECTTTCGGGGGCTTSCEE
T ss_pred --CCceEEEEECCCC--CCCCCceEEEEeccccCCCCCCCCCceEEecCCCCeecccccccccchhhcchhhhhcCCcEE
Confidence 2469999998641 1135789999999999742
Q ss_pred --CCC----CCChhHHHHHHHHHHHHHhcCCCCCCcEEEEEeCCCCCCCcChHHHHhcCCccCCceEEEEeecC
Q 005255 195 --EGA----GDCSSCVAVMLELARVMSQWAHEFKNAVIFLFNTGEEEGLNGAHSFVTQHPWSTTIRVAVDLEAM 262 (706)
Q Consensus 195 --pGA----~Dd~sgva~~LE~ar~L~~~~~~p~~~I~flf~~~EE~gl~GS~~f~~~~~~~~~v~a~iNLD~~ 262 (706)
+|+ .||+.|++++|++++.|.+.+ .++++|+|+|+.+||.| .|++.+..+. . +....+++|..
T Consensus 130 ~grGat~l~~D~K~g~a~~l~a~~~l~~~~-~~~~~v~~~~~~~EE~g-~Ga~~~~~~~-~--~~d~~i~~d~~ 198 (417)
T 1fno_A 130 TTDGKTLLGADDKAGVAEIMTALAVLKGNP-IPHGDIKVAFTPDEEVG-KGAKHFDVEA-F--GAQWAYTVDGG 198 (417)
T ss_dssp ECCSSSCCCHHHHHHHHHHHHHHHHHHSSS-CCCCCEEEEEESCGGGT-CTTTTCCHHH-H--CCSEEEECCCC
T ss_pred EcCCccccccccHHhHHHHHHHHHHHHhCC-CCCCcEEEEEEeccccC-CChhhhchhh-c--CCCEEEEeCCC
Confidence 132 888999999999999999877 67899999999999998 8998776321 1 34567777754
No 42
>3kl9_A PEPA, glutamyl aminopeptidase; tetrahedral aminopeptidase, S specificity, metallopeptidase M42, hydrolas; 2.70A {Streptococcus pneumoniae}
Probab=99.23 E-value=1.4e-10 Score=125.58 Aligned_cols=225 Identities=20% Similarity=0.182 Sum_probs=157.2
Q ss_pred HHHHHHHHHHHcCCCCCCCCHHHHHHHHHHHHHHHhhccccCCcceEEEEeeeccCCCcccccccccCccccccccceEE
Q 005255 87 LEAMKHVKALTQLGPHAVGSDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYSDLNHIV 166 (706)
Q Consensus 87 erA~~~L~~L~~igpR~~gS~~~~~a~~yL~~~l~~ig~~~~~~~~vevd~f~~~~g~~~~~g~~~~~~~~~y~~~~NVi 166 (706)
.+.++.|++|+++ |.+.|.+ +++++|+.+++++++. ++++| +..|++
T Consensus 3 ~~~~~~l~~L~~i-ps~SG~E--~~v~~~l~~~l~~~g~------~~~~D------------------------~~GNli 49 (355)
T 3kl9_A 3 TTLFSKIKEVTEL-AAVSGHE--APVRAYLREKLTPHVD------EVVTD------------------------GLGGIF 49 (355)
T ss_dssp HHHHHHHHHHHTS-CCBTTCC--HHHHHHHHHHHGGGSS------EEEEC------------------------TTSCEE
T ss_pred HHHHHHHHHHHhC-CCCCCCH--HHHHHHHHHHHHHhCC------EEEEC------------------------CCCeEE
Confidence 4678899999996 6665544 6789999999999983 44443 357999
Q ss_pred EEEcCCCCCCCCCCeEEEeecccccCC--------C--------------------------------------------
Q 005255 167 LRILPKYASEAGENAILVSSHIDTVSA--------G-------------------------------------------- 194 (706)
Q Consensus 167 ~~i~g~~~~~~~~~~Vll~aH~DSv~~--------~-------------------------------------------- 194 (706)
++++|++ ++.+.|++.||+|+|+. +
T Consensus 50 ~~~~g~~---~~~~~v~l~aHmD~Vg~mV~~I~~~G~l~~~~iGG~~~~~~~~~~v~i~t~~g~~~~Gvig~~~~H~~~~ 126 (355)
T 3kl9_A 50 GIKHSEA---VDAPRVLVASHMDEVGFMVSEIKPDGTFRVVEIGGWNPMVVSSQRFKLLTRDGHEIPVISGSVPPHLTRG 126 (355)
T ss_dssp EEECCCS---TTCCEEEEEEECCBCEEEEEEECTTSCEEEEEESCCCTTTCSSCEEEEECTTSCEEEEEEC---------
T ss_pred EEECCcC---CCCCeEEEEeccccccceEEEECCCCEEEEEecCCccccccCCCEEEEEcCCCCEEEEEEeCccccccCh
Confidence 9998751 24578999999998862 0
Q ss_pred ---------------------------------------------------CCCCCChhHHHHHHHHHHHHHhcCCCCCC
Q 005255 195 ---------------------------------------------------EGAGDCSSCVAVMLELARVMSQWAHEFKN 223 (706)
Q Consensus 195 ---------------------------------------------------pGA~Dd~sgva~~LE~ar~L~~~~~~p~~ 223 (706)
..+-||..||++++|+++.+.+. ++++
T Consensus 127 ~~~~~~~~~~~~~iD~g~~s~ee~~~~GI~~Gd~v~~d~~~~~~~~~~~i~s~~lDnr~g~~~~l~~l~~l~~~--~~~~ 204 (355)
T 3kl9_A 127 KGGPTMPAIADIVFDGGFADKAEAESFGIRPGDTIVPDSSAILTANEKNIISKAWDNRYGVLMVSELAEALSGQ--KLGN 204 (355)
T ss_dssp ------CCGGGSCEECCCSSHHHHHHTTCCTTCEEEECCCCEECTTSSEEEESCHHHHHHHHHHHHHHHHHSSC--CCSS
T ss_pred hhccCCCChhhEEEEeccCCHHHHHHcCCCCCCEEEeccceEEecCCCEEEeeccccHHHHHHHHHHHHHhhhc--CCCc
Confidence 23679999999999999998754 5789
Q ss_pred cEEEEEeCCCCCCCcChHHHHhcCCccCCceEEEEeecCcCCC-----------Ccccccc-C--CCHHHHHHHHHHccC
Q 005255 224 AVIFLFNTGEEEGLNGAHSFVTQHPWSTTIRVAVDLEAMGIGG-----------RSALFQA-G--PNLWAVENFAAVAKY 289 (706)
Q Consensus 224 ~I~flf~~~EE~gl~GS~~f~~~~~~~~~v~a~iNLD~~G~gg-----------~~~lfq~-g--~~~~li~~y~~~a~~ 289 (706)
+++++|+.-||.|+.|++....... ...+|.+|+.-.+. +.+-... + .++.+.+...+.++.
T Consensus 205 ~v~~~ft~qEEvG~~Ga~~a~~~~~----pd~~i~~D~~~a~d~p~~~~~lg~G~~i~~~d~~~~~~~~l~~~l~~~a~~ 280 (355)
T 3kl9_A 205 ELYLGSNVQEEVGLRGAHTSTTKFD----PEVFLAVDCSPAGDVYGGQGKIGDGTLIRFYDPGHLLLPGMKDFLLTTAEE 280 (355)
T ss_dssp EEEEEEESCCTTTSHHHHHHHHHHC----CSEEEEEEEEECCGGGTSSCCTTSCEEEEEEETTEECCHHHHHHHHHHHHH
T ss_pred eEEEEEECccccCcchhHHHHhccC----CCEEEEecCccCCCCCCcccccCCCcEEEEecCCCCCCHHHHHHHHHHHHH
Confidence 9999999999999999987764321 23478888754332 1111111 1 267777776665432
Q ss_pred CCCcccccccccCCCCCCCCchHHHhh-cCCCeEEEEEeecCCCCCCCcCCCcCCCCHHHHHHHHHHHHHHHHHHh
Q 005255 290 PSGQIIGQDLFASGVFETATDFQVYTE-VAGLSGLDFAYTDKSAVYHTKNDRLDLLKPGSLQHLGENMLDFLLQTA 364 (706)
Q Consensus 290 p~~~~l~~e~f~~g~ips~TD~~~F~~-~~GiPgld~a~~~~~~~YHT~~Dt~d~id~~sLq~~g~~~l~ll~~la 364 (706)
.+.. .+..+. ..+||-..+.. ..|+|..++.. ... +.||+. |.++.+.+++..+.+.+++..+.
T Consensus 281 -~gIp-~q~~~~----ggGtDa~~i~~a~~Gipt~~igv-p~~-~~Hs~~---E~~~~~Di~~~~~ll~~~l~~l~ 345 (355)
T 3kl9_A 281 -AGIK-YQYYCG----KGGTDAGAAHLKNGGVPSTTIGV-CAR-YIHSHQ---TLYAMDDFLEAQAFLQALVKKLD 345 (355)
T ss_dssp -TTCC-EEEEEC----SSCCTHHHHTTSTTCCCEEEEEE-EEB-SCSSSC---EEEEHHHHHHHHHHHHHHHHTCC
T ss_pred -cCCC-EEEECC----CcchHHHHHHHhCCCCCEEEEcc-CcC-CCCCcc---eEeeHHHHHHHHHHHHHHHHHhC
Confidence 1111 111211 25899888764 26899998753 333 378865 77889999999998888887653
No 43
>3mru_A Aminoacyl-histidine dipeptidase; metalloprotease, homodimer, hydrolase; 3.00A {Vibrio alginolyticus}
Probab=99.22 E-value=3.1e-11 Score=136.03 Aligned_cols=140 Identities=16% Similarity=0.232 Sum_probs=108.2
Q ss_pred CCCCHHHHHHHHHHHHcCCCCCCCCHHHHHHHHHHHHHHHhhccccCCcceEEEEeeeccCCCcccccccccCccccccc
Q 005255 82 RGFSELEAMKHVKALTQLGPHAVGSDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYSD 161 (706)
Q Consensus 82 ~~fs~erA~~~L~~L~~igpR~~gS~~~~~a~~yL~~~l~~ig~~~~~~~~vevd~f~~~~g~~~~~g~~~~~~~~~y~~ 161 (706)
.+++.++.++.+++|.++ |++.+ .+.++.+||.++++++|. +++.| .
T Consensus 9 ~~~~~~~~~~~~~~L~~i-ps~s~--~e~~~~~~l~~~l~~~G~------~v~~~------------------------~ 55 (490)
T 3mru_A 9 STLSPAPLWQFFDKICSI-PHPSK--HEEALAQYIVTWATEQGF------DVRRD------------------------P 55 (490)
T ss_dssp GGSSSHHHHHHHHHHHHS-CCBTT--CCTTHHHHHHHHHHHTTC------EEEEC------------------------T
T ss_pred hccCHHHHHHHHHHHhCC-CCCCC--CHHHHHHHHHHHHHHcCC------EEEEc------------------------C
Confidence 357889999999999997 66544 347899999999999983 34432 2
Q ss_pred cceEEEEEcCCCCCCCCCCeEEEeecccccCCC------------------------CCCC---CChhHHHHHHHHHHHH
Q 005255 162 LNHIVLRILPKYASEAGENAILVSSHIDTVSAG------------------------EGAG---DCSSCVAVMLELARVM 214 (706)
Q Consensus 162 ~~NVi~~i~g~~~~~~~~~~Vll~aH~DSv~~~------------------------pGA~---Dd~sgva~~LE~ar~L 214 (706)
..|++++++|+.+ .++.+.|++.+|+|+||.. +|+. ||+.|+|++|++++
T Consensus 56 ~~nv~a~~~g~~g-~~~~~~v~l~aH~D~vp~~~~~~~~~w~~~p~~~~~~~g~l~g~G~~lgaD~k~g~a~~l~~l~-- 132 (490)
T 3mru_A 56 TGNVFIKKPATPG-MENKKGVVLQAHIDMVPQKNEDTDHDFTQDPIQPYIDGEWVTAKGTTLGADNGIGMASCLAVLA-- 132 (490)
T ss_dssp TCCEEEEECCCTT-CTTCCCEEEEEECCBCCCBCTTSCCCTTTCCCCEEEETTEEEETTBCCCHHHHTTHHHHHHHHH--
T ss_pred CCeEEEEEcCCCC-CCCCCeEEEEeccCCCCCCCCCcccccccCCceEEeeCCeEecCCCccCCCCHHHHHHHHHHHH--
Confidence 3599999986411 1356789999999999753 5776 99999999999763
Q ss_pred HhcCCCCCCcEEEEEeCCCCCCCcChHHHHhcCCccCCceEEEEeecC
Q 005255 215 SQWAHEFKNAVIFLFNTGEEEGLNGAHSFVTQHPWSTTIRVAVDLEAM 262 (706)
Q Consensus 215 ~~~~~~p~~~I~flf~~~EE~gl~GS~~f~~~~~~~~~v~a~iNLD~~ 262 (706)
....++.+|.|+|+.+||.|+.|++.+.++. -+.+.++|+|..
T Consensus 133 --~~~~~~~~v~~~~~~~EE~g~~Ga~~~~~~~---~~~~~~~~~d~~ 175 (490)
T 3mru_A 133 --SKEIKHGPIEVLLTIDEEAGMTGAFGLEAGW---LKGDILLNTDSE 175 (490)
T ss_dssp --CSSCCCCSEEEEEESCSSSTTGGGGTCCSSS---CCSSEEEECCCC
T ss_pred --hCCCCCCCEEEEEEcccccccHhHHHhhhcc---cCCCEEEEcCCC
Confidence 2345678999999999999999999988432 246778888854
No 44
>3khx_A Putative dipeptidase sacol1801; DAPE, metallopeptidase, hydrolase, metal-bindin metalloprotease, protease; 2.30A {Staphylococcus aureus} PDB: 3ki9_A 3khz_A
Probab=99.22 E-value=7.6e-11 Score=132.84 Aligned_cols=136 Identities=15% Similarity=0.228 Sum_probs=103.9
Q ss_pred CHHHHHHHHHHHHcCCCCCCCC----------HHHHHHHHHHHHHHHhhccccCCcceEEEEeeeccCCCcccccccccC
Q 005255 85 SELEAMKHVKALTQLGPHAVGS----------DALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKG 154 (706)
Q Consensus 85 s~erA~~~L~~L~~igpR~~gS----------~~~~~a~~yL~~~l~~ig~~~~~~~~vevd~f~~~~g~~~~~g~~~~~ 154 (706)
..++..+.+++|.++.. +.+. ++..++.+|+.++++++|. +++..
T Consensus 32 ~~~~~~~~l~~lv~ips-~s~~e~~~~~~p~g~~~~~~~~~l~~~l~~~G~------~~~~~------------------ 86 (492)
T 3khx_A 32 YEDQIINDLKGLLAIES-VRDDAKASEDAPVGPGPRKALDYMYEIAHRDGF------TTHDV------------------ 86 (492)
T ss_dssp THHHHHHHHHHHHTSCC-CCCSSSCCSSSTTCHHHHHHHHHHHHHHHHTTC------EEEEE------------------
T ss_pred hHHHHHHHHHHHhcCCC-CCCCcccccccccchHHHHHHHHHHHHHHHcCC------cceEe------------------
Confidence 35788999999998743 2222 3456899999999999983 33321
Q ss_pred ccccccccceEEEEEcCCCCCCCCCCeEEEeecccccCC-------------------CCCCCCChhHHHHHHHHHHHHH
Q 005255 155 KTLIYSDLNHIVLRILPKYASEAGENAILVSSHIDTVSA-------------------GEGAGDCSSCVAVMLELARVMS 215 (706)
Q Consensus 155 ~~~~y~~~~NVi~~i~g~~~~~~~~~~Vll~aH~DSv~~-------------------~pGA~Dd~sgva~~LE~ar~L~ 215 (706)
.|+++.++.. ...+.|++.+|+|+||. ++|+.||++|++++|++++.|.
T Consensus 87 --------~~~~~~~~~g----~~~~~i~l~~H~D~vp~~~~w~~~Pf~~~~~~g~l~GrG~~D~Kg~~a~~l~a~~~l~ 154 (492)
T 3khx_A 87 --------DHIAGRIEAG----KGNDVLGILCHVDVVPAGDGWDSNPFEPVVTEDAIIARGTLDDKGPTIAAYYAIKILE 154 (492)
T ss_dssp --------TTTEEEEEEE----CSSCEEEEEEECCCCCCCSCCSSCTTSCEECSSEEESTTTTTTHHHHHHHHHHHHHHH
T ss_pred --------CCEEEEEEeC----CCCCEEEEEEeccCCCCCCCcccCCCceEEECCEEEecCCccCcHHHHHHHHHHHHHH
Confidence 2344444421 13578999999999985 2699999999999999999999
Q ss_pred hcCCCCCCcEEEEEeCCCCCCCcChHHHHhcCCccCCceEEEEee
Q 005255 216 QWAHEFKNAVIFLFNTGEEEGLNGAHSFVTQHPWSTTIRVAVDLE 260 (706)
Q Consensus 216 ~~~~~p~~~I~flf~~~EE~gl~GS~~f~~~~~~~~~v~a~iNLD 260 (706)
+.+.+++++|.|+|..+||.|..|++.++++++. ....+..|
T Consensus 155 ~~~~~~~~~i~~~~~~~EE~g~~g~~~~~~~~~~---~~~~~~~d 196 (492)
T 3khx_A 155 DMNVDWKKRIHMIIGTDEESDWKCTDRYFKTEEM---PTLGFAPD 196 (492)
T ss_dssp HTTCCCSSEEEEEEECCTTCCCCTTSHHHHHSCC---CSEEECSS
T ss_pred HcCCCCCCCEEEEEECCccCCCcCHHHHHHhCcC---CCEEEecC
Confidence 8877889999999999999999999999987753 33444444
No 45
>3isz_A Succinyl-diaminopimelate desuccinylase; DAPE, Zn-binding, metallopeptidase, structural genomics, PSI-2, protein struc initiative; 2.00A {Haemophilus influenzae} PDB: 3ic1_A
Probab=99.20 E-value=1e-10 Score=126.02 Aligned_cols=139 Identities=19% Similarity=0.210 Sum_probs=103.7
Q ss_pred HHHHHHHHHHHcCCCCCCCCHHHHHHHHHHHHHHHhhccccCCcceEEEEeeeccCCCcccccccccCccccccccceEE
Q 005255 87 LEAMKHVKALTQLGPHAVGSDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYSDLNHIV 166 (706)
Q Consensus 87 erA~~~L~~L~~igpR~~gS~~~~~a~~yL~~~l~~ig~~~~~~~~vevd~f~~~~g~~~~~g~~~~~~~~~y~~~~NVi 166 (706)
++..+.+++|.++ |- -|..+.++++||.++|+++|. +++.. . ..+..|++
T Consensus 3 ~~~~~~~~~L~~~-ps--~s~~e~~~~~~l~~~l~~~g~------~~~~~--~-------------------~~~~~n~~ 52 (377)
T 3isz_A 3 EKVVSLAQDLIRR-PS--ISPNDEGCQQIIAERLEKLGF------QIEWM--P-------------------FNDTLNLW 52 (377)
T ss_dssp HHHHHHHHHHHTS-CC--BTTCCTTHHHHHHHHHHHTTC------EEEEC--C-------------------BTTBCEEE
T ss_pred hHHHHHHHHHhcC-CC--CCCChhhHHHHHHHHHHHCCC------ceEEe--e-------------------cCCCceEE
Confidence 5778899999986 32 233445789999999999983 33321 0 01357999
Q ss_pred EEEcCCCCCCCCCCeEEEeecccccCC---------------------CCCCCCChhHHHHHHHHHHHHHhcCCCCCCcE
Q 005255 167 LRILPKYASEAGENAILVSSHIDTVSA---------------------GEGAGDCSSCVAVMLELARVMSQWAHEFKNAV 225 (706)
Q Consensus 167 ~~i~g~~~~~~~~~~Vll~aH~DSv~~---------------------~pGA~Dd~sgva~~LE~ar~L~~~~~~p~~~I 225 (706)
+++ |+ +.+.|++.+|+|+||. ++|+.||+.|++++|++++.+.+.+.+++++|
T Consensus 53 a~~-g~-----~~~~i~l~aH~D~vp~~~~~~w~~~pf~~~~~~g~~~g~G~~D~k~g~~~~l~a~~~l~~~~~~~~~~v 126 (377)
T 3isz_A 53 AKH-GT-----SEPVIAFAGHTDVVPTGDENQWSSPPFSAEIIDGMLYGRGAADMKGSLAAMIVAAEEYVKANPNHKGTI 126 (377)
T ss_dssp EEE-ES-----SSCEEEEEEECCBCCCCCGGGCSSCTTSCCEETTEEESTTTTTTHHHHHHHHHHHHHHHHHCTTCSSEE
T ss_pred EEe-CC-----CCCEEEEeccccccCCCCcccCCCCCCCcEEECCEEEeCChhhhhHHHHHHHHHHHHHHHhCCCCCceE
Confidence 988 53 3478999999999985 26788999999999999999988777788999
Q ss_pred EEEEeCCCCCCC-cChHHHHhcCCc-cCCceEEEEeec
Q 005255 226 IFLFNTGEEEGL-NGAHSFVTQHPW-STTIRVAVDLEA 261 (706)
Q Consensus 226 ~flf~~~EE~gl-~GS~~f~~~~~~-~~~v~a~iNLD~ 261 (706)
.|+|..+||.|. .|++.+.+.... ..++.+++..|.
T Consensus 127 ~~~~~~~EE~~~~~G~~~~~~~~~~~~~~~d~~~~~e~ 164 (377)
T 3isz_A 127 ALLITSDEEATAKDGTIHVVETLMARDEKITYCMVGEP 164 (377)
T ss_dssp EEEEESCSSSCCSSSHHHHHHHHHHTTCCCCEEEECCC
T ss_pred EEEEEcccccCccccHHHHHHHHHhcCCCCCEEEEcCC
Confidence 999999999986 699988753211 123555665553
No 46
>3pfe_A Succinyl-diaminopimelate desuccinylase; metal binding, merops M20 familiy, phosphorylase/hydrolase-L structural genomics; HET: MSE; 1.50A {Legionella pneumophila subsp}
Probab=99.20 E-value=5.1e-11 Score=133.41 Aligned_cols=145 Identities=13% Similarity=0.177 Sum_probs=108.6
Q ss_pred HHHHHHHHHHHcCCCCCCCC--------HHHHHHHHHHHHHHHhhccccCCcceEEEEeeeccCCCcccccccccCcccc
Q 005255 87 LEAMKHVKALTQLGPHAVGS--------DALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLI 158 (706)
Q Consensus 87 erA~~~L~~L~~igpR~~gS--------~~~~~a~~yL~~~l~~ig~~~~~~~~vevd~f~~~~g~~~~~g~~~~~~~~~ 158 (706)
+++.+.+++|.++.. ..+. .++.++.+|+.++|+++|.+ ..++++. ...
T Consensus 18 ~~~~~~l~~lv~ips-~s~~~~~~~~~~~~e~~~~~~i~~~l~~~G~~---~~~~~~~--~~~----------------- 74 (472)
T 3pfe_A 18 EEILPSLCDYIKIPN-KSPHFDAKWEEHGYMEQAVNHIANWCKSHAPK---GMTLEIV--RLK----------------- 74 (472)
T ss_dssp HTHHHHHHHHHTCCC-BCGGGCTTHHHHCHHHHHHHHHHHHHHHTCCT---TCEEEEE--CCT-----------------
T ss_pred HHHHHHHHHHhCCCC-cCCCccccccccchHHHHHHHHHHHHHHcCCC---CcceEEE--ecC-----------------
Confidence 457888999998732 2211 12568999999999999842 1123321 110
Q ss_pred ccccceEEEEEcCCCCCCCCCCeEEEeecccccCC---------------------CCCCCCChhHHHHHHHHHHHHHhc
Q 005255 159 YSDLNHIVLRILPKYASEAGENAILVSSHIDTVSA---------------------GEGAGDCSSCVAVMLELARVMSQW 217 (706)
Q Consensus 159 y~~~~NVi~~i~g~~~~~~~~~~Vll~aH~DSv~~---------------------~pGA~Dd~sgva~~LE~ar~L~~~ 217 (706)
....||+++++|+ +.+.|++.+|+|+||. ++|+.||+.+++++|++++.|.+.
T Consensus 75 -~~~~~v~a~~~g~-----~~~~i~l~~H~D~vp~~~~w~~~~~Pf~~~~~~g~~~grG~~D~K~~~a~~l~a~~~l~~~ 148 (472)
T 3pfe_A 75 -NRTPLLFMEIPGQ-----IDDTVLLYGHLDKQPEMSGWSDDLHPWKPVLKNGLLYGRGGADDGYSAYASLTAIRALEQQ 148 (472)
T ss_dssp -TSCCEEEEEECCS-----EEEEEEEEEECCBCCCCSCCCTTCBTTBCEEETTEEESTTCCCCCHHHHHHHHHHHHHHHT
T ss_pred -CCCcEEEEEEcCC-----CCCeEEEEccccCCCCcCCCCcCCCCCceEEECCEEEEeCcccCcHHHHHHHHHHHHHHHc
Confidence 0247999999763 3478999999998873 278999999999999999999987
Q ss_pred CCCCCCcEEEEEeCCCCCCCcChHHHHhcCCc-cCCceEEEEeec
Q 005255 218 AHEFKNAVIFLFNTGEEEGLNGAHSFVTQHPW-STTIRVAVDLEA 261 (706)
Q Consensus 218 ~~~p~~~I~flf~~~EE~gl~GS~~f~~~~~~-~~~v~a~iNLD~ 261 (706)
+.+++ +|.|+|..+||.|..|++.++++++. .+++.+++.+|.
T Consensus 149 ~~~~~-~v~~~~~~~EE~g~~g~~~~~~~~~~~~~~~d~~~~~~~ 192 (472)
T 3pfe_A 149 GLPYP-RCILIIEACEESGSYDLPFYIELLKERIGKPSLVICLDS 192 (472)
T ss_dssp TCCCE-EEEEEEESCGGGTSTTHHHHHHHHHHHHCCCSEEEEECC
T ss_pred CCCCC-cEEEEEEeCCCCCChhHHHHHHHhHhhccCCCEEEEeCC
Confidence 76666 99999999999999999999976532 236778888874
No 47
>3cpx_A Aminopeptidase, M42 family; YP_676701.1, putative M42 glutamyl aminopeptidase, structura genomics; 2.39A {Cytophaga hutchinsonii atcc 33406}
Probab=99.17 E-value=4.3e-11 Score=127.75 Aligned_cols=224 Identities=13% Similarity=0.072 Sum_probs=144.9
Q ss_pred HHHHHHHHHHcCCCCCCCCHHHHHHHHHHHHHHHhhccccCCcceEEEEeeeccCCCcccccccccCccccccccceEEE
Q 005255 88 EAMKHVKALTQLGPHAVGSDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYSDLNHIVL 167 (706)
Q Consensus 88 rA~~~L~~L~~igpR~~gS~~~~~a~~yL~~~l~~ig~~~~~~~~vevd~f~~~~g~~~~~g~~~~~~~~~y~~~~NVi~ 167 (706)
+..+.|++|+++ |.+.| .++.+++||.+++++++.+. ++|..... + .+..|+++
T Consensus 18 ~~~~~l~~Lv~i-~s~sg--~e~~v~~~l~~~l~~~g~~v------~~d~~~~~-------~----------~~~gnlia 71 (321)
T 3cpx_A 18 QGMQLLKELCSI-HAPSG--NEEPLKDFILEYIRSNAGSW------SYQPVIYA-------D----------NDLQDCIV 71 (321)
T ss_dssp CHHHHHHHHHHS-CCBTT--CCHHHHHHHHHHHHHHGGGS------SSCCEEEC-------S----------GGGTTCEE
T ss_pred HHHHHHHHHHcC-CCCCC--CHHHHHHHHHHHHHhhCCeE------EEcccccc-------c----------cCCccEEE
Confidence 457889999997 55544 34567999999999998532 22210000 0 02578999
Q ss_pred EEcCCCCCCCCCCeEEEeecccccC-----------C---------------------------------------CCC-
Q 005255 168 RILPKYASEAGENAILVSSHIDTVS-----------A---------------------------------------GEG- 196 (706)
Q Consensus 168 ~i~g~~~~~~~~~~Vll~aH~DSv~-----------~---------------------------------------~pG- 196 (706)
+++| + +.+++.+|+|+|+ . .+|
T Consensus 72 ~~~g------~-~~ill~aH~DtV~~~v~~i~~~~~~Gg~~~~~~~~v~~~~~~g~~~gvi~~~ee~~~ida~~lv~~Gd 144 (321)
T 3cpx_A 72 LVFG------N-PRTAVFAHMDSIGFTVSYNNHLHPIGSPSAKEGYRLVGKDSNGDIEGVLKIVDEEWMLETDRLIDRGT 144 (321)
T ss_dssp EEES------S-CSEEEEEECCBCEEEECSTTBEEEESSCCCCTTCEEEEEETTEEEEEEEECGGGSCEEECSSCCCTTC
T ss_pred EecC------C-ceEEEEecCCcCCeEecccCCeEEcCChhhcccCEEEEEeCCCceeeeECCccHHHHHHHHhcCCCCC
Confidence 8753 2 5699999999983 0 122
Q ss_pred ------------------CCCChhHHHHHHHHHHHHHhcCCCCCCcEEEEEeCCCCCCCcChHHHHhcCCccCCceEEEE
Q 005255 197 ------------------AGDCSSCVAVMLELARVMSQWAHEFKNAVIFLFNTGEEEGLNGAHSFVTQHPWSTTIRVAVD 258 (706)
Q Consensus 197 ------------------A~Dd~sgva~~LE~ar~L~~~~~~p~~~I~flf~~~EE~gl~GS~~f~~~~~~~~~v~a~iN 258 (706)
+.||+.|+++++|+++.+. + ++++|++.||.|+.|++....-....-+..++++
T Consensus 145 ~v~~~~~~~~~~g~i~~~~~D~k~G~aa~l~al~~l~-------~-i~~~~t~~EEvG~~Ga~~a~~~~~~~~~~~~~i~ 216 (321)
T 3cpx_A 145 EVTFKPDFREEGDFILTPYLDDRLGVWTALELAKTLE-------H-GIIAFTCWEEHGGGSVAYLARWIYETFHVKQSLI 216 (321)
T ss_dssp EEEECCCCEEETTEEECTTHHHHHHHHHHHHHTTTCC-------S-EEEEEESSTTTTCCSHHHHHHHHHHHHCCCEEEE
T ss_pred EEEeccCcEEEcCEEEEcCCcCHHHHHHHHHHHHHhc-------C-cEEEEECCccCchhcchhhhhccccccCCCEEEE
Confidence 5899999999999998653 2 9999999999999999863310000123467899
Q ss_pred eecCcCCC-------Ccccc--ccCCCHHHHHHHHHHccCCCCcccccccccCCCCCCCCchHHHhh-cCCCeEEEEEee
Q 005255 259 LEAMGIGG-------RSALF--QAGPNLWAVENFAAVAKYPSGQIIGQDLFASGVFETATDFQVYTE-VAGLSGLDFAYT 328 (706)
Q Consensus 259 LD~~G~gg-------~~~lf--q~g~~~~li~~y~~~a~~p~~~~l~~e~f~~g~ips~TD~~~F~~-~~GiPgld~a~~ 328 (706)
+|....+. ...-. ..-+++.+.+...+.++. .+.....+. ..+.+||-..+.. ..|+|.+++.-.
T Consensus 217 ~D~~~~~~~~~~~~G~~i~~~~~~~~~~~l~~~~~~~a~~-~gi~~q~~~----~~~GGsD~~~~~~s~~Gipt~~lG~~ 291 (321)
T 3cpx_A 217 CDITWVTEGVEAGKGVAISMRDRMIPRKKYVNRIIELARQ-TDIPFQLEV----EGAGASDGRELQLSPYPWDWCFIGAP 291 (321)
T ss_dssp CCCEECCSSSCTTSCEEEEEESSSCCCHHHHHHHHHHHTT-SSCCEEEEE----CSSCCCHHHHHHHSSSCCBCCBEECE
T ss_pred EeCccccCCcccCCCcEEEECCCCCCCHHHHHHHHHHHHH-cCCCEEEEe----CCCCCccHHHHHHhCCCCCEEEEchh
Confidence 99876432 11111 111256777777665532 222111111 1456899888842 379999976543
Q ss_pred cCCCCCCCcCCCcCCCCHHHHHHHHHHHHHHHHH
Q 005255 329 DKSAVYHTKNDRLDLLKPGSLQHLGENMLDFLLQ 362 (706)
Q Consensus 329 ~~~~~YHT~~Dt~d~id~~sLq~~g~~~l~ll~~ 362 (706)
. ...||+ .|.++.++++...+.+.+++..
T Consensus 292 ~--~~~Hs~---~E~~~~~dl~~~~~ll~~~~~~ 320 (321)
T 3cpx_A 292 E--KDAHTP---NECVHKKDIESMVGLYKYLMEK 320 (321)
T ss_dssp E--BSTTST---TCEEEHHHHHHHHHHHHHHHHH
T ss_pred h--cccchh---hhheeHHHHHHHHHHHHHHHHh
Confidence 2 347984 4677888999988888887764
No 48
>1xmb_A IAA-amino acid hydrolase homolog 2; structural genomics, protein structure initiative, CESG AT5G56660, ILL2, indole-3-acetic acid, auxin; 2.00A {Arabidopsis thaliana} SCOP: c.56.5.4 d.58.19.1 PDB: 2q43_A
Probab=99.15 E-value=4.7e-10 Score=123.53 Aligned_cols=135 Identities=14% Similarity=0.217 Sum_probs=102.3
Q ss_pred HHHHHHHHHHHcCCCCCCCCHHHHHHHHHHHHHHHhhccccCCcceEEEEeeeccCCCcccccccccCccccccccceEE
Q 005255 87 LEAMKHVKALTQLGPHAVGSDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYSDLNHIV 166 (706)
Q Consensus 87 erA~~~L~~L~~igpR~~gS~~~~~a~~yL~~~l~~ig~~~~~~~~vevd~f~~~~g~~~~~g~~~~~~~~~y~~~~NVi 166 (706)
+++.+.+++|.++ |.+. .++.++.+||.++|+++|. +++.+. ...|++
T Consensus 28 ~~~i~~~~~l~~i-ps~s--~~e~~~~~~l~~~l~~~G~------~v~~~~-----------------------~~~~l~ 75 (418)
T 1xmb_A 28 DWMVKIRRKIHEN-PELG--YEELETSKLIRSELELIGI------KYRYPV-----------------------AITGVI 75 (418)
T ss_dssp HHHHHHHHHHHHS-CCCT--TCCHHHHHHHHHHHHHHTC------CEEEEE-----------------------TTTEEE
T ss_pred HHHHHHHHHHHhC-CCCC--CChHHHHHHHHHHHHHcCC------eeEecc-----------------------CCcEEE
Confidence 6788999999986 4443 3456889999999999984 344321 146899
Q ss_pred EEEcCCCCCCCCCCeEEEeecccccCCCC-----------CC---CCChhHHHHHHHHHHHHHhcCCCCCCcEEEEEeCC
Q 005255 167 LRILPKYASEAGENAILVSSHIDTVSAGE-----------GA---GDCSSCVAVMLELARVMSQWAHEFKNAVIFLFNTG 232 (706)
Q Consensus 167 ~~i~g~~~~~~~~~~Vll~aH~DSv~~~p-----------GA---~Dd~sgva~~LE~ar~L~~~~~~p~~~I~flf~~~ 232 (706)
++++|+ .+ +.|++.+|+|+||... |. .+.+.|++++|++++.|.+.+.+++++|+|+|+.+
T Consensus 76 a~~~~~----~~-~~i~l~aH~D~vp~~~~~~~pf~~~~~g~~~g~G~d~~~a~~l~a~~~l~~~~~~~~~~v~~~~~~~ 150 (418)
T 1xmb_A 76 GYIGTG----EP-PFVALRADMDALPIQEGVEWEHKSKIAGKMHACGHDGHVTMLLGAAKILHEHRHHLQGTVVLIFQPA 150 (418)
T ss_dssp EEEESS----SS-CEEEEEEECCCBSCCCCCCSTTCCSSTTCBCCSSHHHHHHHHHHHHHHHHHTGGGCSSEEEEEEECC
T ss_pred EEEcCC----CC-CEEEEEecccccCCCCCCCCCcccCCCCceEeCCchHHHHHHHHHHHHHHhccccCCceEEEEEecc
Confidence 999764 23 7899999999998531 21 11238999999999999987777899999999999
Q ss_pred CCCCCcChHHHHhcCCccCCceEEEEee
Q 005255 233 EEEGLNGAHSFVTQHPWSTTIRVAVDLE 260 (706)
Q Consensus 233 EE~gl~GS~~f~~~~~~~~~v~a~iNLD 260 (706)
|| |..|++.++++.. .+++.++++++
T Consensus 151 EE-g~~G~~~~~~~g~-~~~~d~~i~~~ 176 (418)
T 1xmb_A 151 EE-GLSGAKKMREEGA-LKNVEAIFGIH 176 (418)
T ss_dssp TT-TTCHHHHHHHTTT-TTTEEEEEEEE
T ss_pred cc-ccccHHHHHHcCC-cCCCCEEEEEe
Confidence 99 9999999996542 23466777654
No 49
>2f7v_A Aectylcitrulline deacetylase; alpha/beta, hydrolase; 1.75A {Xanthomonas campestris} PDB: 2f8h_A
Probab=99.14 E-value=1.3e-10 Score=125.68 Aligned_cols=130 Identities=19% Similarity=0.218 Sum_probs=99.7
Q ss_pred HHHHHHHHHHHHcCCCCCCCCH---HHHHHHHHHHHHHHhhccccCCcceEEEEeeeccCCCcccccccccCcccccccc
Q 005255 86 ELEAMKHVKALTQLGPHAVGSD---ALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYSDL 162 (706)
Q Consensus 86 ~erA~~~L~~L~~igpR~~gS~---~~~~a~~yL~~~l~~ig~~~~~~~~vevd~f~~~~g~~~~~g~~~~~~~~~y~~~ 162 (706)
.+++.+.+++|.++.. ..... ++.++++||.++|+ | ++++.+... ...
T Consensus 8 ~~~~~~~l~~l~~ips-~s~~~~~~~e~~~~~~l~~~l~--G------~~~~~~~~~--------------------~~~ 58 (369)
T 2f7v_A 8 LASTLEHLETLVSFDT-RNPPRAIAAEGGIFDYLRAQLP--G------FQVEVIDHG--------------------DGA 58 (369)
T ss_dssp HHHHHHHHHHHHHSCC-BTTTTCCCSSSHHHHHHHTTCT--T------CEEEEEECS--------------------TTC
T ss_pred hHHHHHHHHHHhCCCC-cCCCCCCccHHHHHHHHHHHhC--C------CceEEEEcC--------------------CCc
Confidence 4788999999999743 22112 45689999999998 5 344443210 034
Q ss_pred ceEEEEEcCCCCCCCCCCeEEEeecccccCC-------------------CCCCCCChhHHHHHHHHHHHHHhcCCCCCC
Q 005255 163 NHIVLRILPKYASEAGENAILVSSHIDTVSA-------------------GEGAGDCSSCVAVMLELARVMSQWAHEFKN 223 (706)
Q Consensus 163 ~NVi~~i~g~~~~~~~~~~Vll~aH~DSv~~-------------------~pGA~Dd~sgva~~LE~ar~L~~~~~~p~~ 223 (706)
.|+++ ++|+ +.|++.+|+|+||. ++|+.||+.|++++|++++. +++
T Consensus 59 ~~~~a-~~g~-------~~i~l~~H~D~vp~~~~w~~~pf~~~~~~g~l~grG~~D~k~g~a~~l~a~~~-------~~~ 123 (369)
T 2f7v_A 59 VSLYA-VRGT-------PKYLFNVHLDTVPDSPHWSADPHVMRRTEDRVIGLGVCDIKGAAAALVAAANA-------GDG 123 (369)
T ss_dssp EEEEE-EESC-------CSEEEEEECCBCCCCSSCSSCTTSCEECSSEEECTTTTTTHHHHHHHHHHHTT-------CCC
T ss_pred eEEEE-EcCC-------CeEEEEeeecccCCCCCCCCCCCCcEEECCEEEecccccccHHHHHHHHHHhc-------CCC
Confidence 79999 8652 56999999999974 37899999999999999985 678
Q ss_pred cEEEEEeCCCCC-CCcChHHHHhcCCccCCceEEEEeecC
Q 005255 224 AVIFLFNTGEEE-GLNGAHSFVTQHPWSTTIRVAVDLEAM 262 (706)
Q Consensus 224 ~I~flf~~~EE~-gl~GS~~f~~~~~~~~~v~a~iNLD~~ 262 (706)
+|+|+|+.+||. |+.|++.++++.. +..+++++|..
T Consensus 124 ~v~~~~~~~EE~~g~~G~~~~~~~~~---~~d~~i~~e~~ 160 (369)
T 2f7v_A 124 DAAFLFSSDEEANDPRCIAAFLARGL---PYDAVLVAEPT 160 (369)
T ss_dssp CEEEEEESCTTSSSCCHHHHHHTTCC---CCSEEEECCCS
T ss_pred CEEEEEEeCcccCCCcCHHHHHhcCC---CCCEEEECCCC
Confidence 999999999999 8899999996543 46677888764
No 50
>2qyv_A XAA-His dipeptidase; YP_718209.1, structural genomi center for structural genomics, JCSG, protein structure INI PSI-2, hydrolase; 2.11A {Haemophilus somnus 129PT}
Probab=99.12 E-value=1.9e-10 Score=129.09 Aligned_cols=139 Identities=14% Similarity=0.227 Sum_probs=105.2
Q ss_pred CCCHHHHHHHHHHHHcCCCCCCCCHHHHHHHHHHHHHHHhhccccCCcceEEEEeeeccCCCcccccccccCcccccccc
Q 005255 83 GFSELEAMKHVKALTQLGPHAVGSDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYSDL 162 (706)
Q Consensus 83 ~fs~erA~~~L~~L~~igpR~~gS~~~~~a~~yL~~~l~~ig~~~~~~~~vevd~f~~~~g~~~~~g~~~~~~~~~y~~~ 162 (706)
+++.+++.+.+++|.++ |.+. ..+.++.+||.++++++|. +++.+ ..
T Consensus 7 ~~~~~~~~~~~~~l~~i-ps~s--~~e~~~~~~l~~~l~~~G~------~~~~~------------------------~~ 53 (487)
T 2qyv_A 7 SLQPKLLWQWFDQICAI-PHPS--YKEEQLAQFIINWAKTKGF------FAERD------------------------EV 53 (487)
T ss_dssp CSSSHHHHHHHHHHHHS-CCBT--TCCHHHHHHHHHHHHHTTC------EEEEC------------------------TT
T ss_pred ccCHHHHHHHHHHHHcC-CCCC--CcHHHHHHHHHHHHHHcCC------EEEEc------------------------CC
Confidence 46778999999999997 4443 3446899999999999983 34432 23
Q ss_pred ceEEEEEcCCCCCCCCCCeEEEeecccccCCC------------------------CCCC---CChhHHHHHHHHHHHHH
Q 005255 163 NHIVLRILPKYASEAGENAILVSSHIDTVSAG------------------------EGAG---DCSSCVAVMLELARVMS 215 (706)
Q Consensus 163 ~NVi~~i~g~~~~~~~~~~Vll~aH~DSv~~~------------------------pGA~---Dd~sgva~~LE~ar~L~ 215 (706)
.|++++++|+.+ .++.+.|++.+|+|+||.. +|+. ||+.|++++|++++.
T Consensus 54 ~nv~a~~~g~~g-~~~~~~i~l~aH~D~vp~~~~~~~~~w~~~p~~~~~~dg~l~g~G~~lgaD~k~g~a~~l~a~~~-- 130 (487)
T 2qyv_A 54 GNVLIRKPATVG-MENRKPVVLQAHLDMVPQANEGTNHNFDQDPILPYIDGDWVKAKGTTLGADNGIGMASALAVLES-- 130 (487)
T ss_dssp CCEEEEECCCTT-CTTBCCEEEEEESCBCCC----------CCCCCEEECSSEEEETTBCCCHHHHHHHHHHHHHHHC--
T ss_pred CcEEEEeCCCCC-CCCCCeEEEEccCCccCCCCCCCccccccCCeeEEeeCCEEEeCCCCcCCcCHHHHHHHHHHHHh--
Confidence 699999976311 0234789999999999853 3776 999999999999973
Q ss_pred hcCCCCCCcEEEEEeCCCCCCCcChHHHHhcCCccCCceEEEEeecC
Q 005255 216 QWAHEFKNAVIFLFNTGEEEGLNGAHSFVTQHPWSTTIRVAVDLEAM 262 (706)
Q Consensus 216 ~~~~~p~~~I~flf~~~EE~gl~GS~~f~~~~~~~~~v~a~iNLD~~ 262 (706)
.+ .++++|.|+|+.+||.|+.|++.++++. . +..+++++|..
T Consensus 131 -~~-~~~~~v~~~~~~~EE~g~~Ga~~~~~~~-~--~~d~~~~~d~~ 172 (487)
T 2qyv_A 131 -ND-IAHPELEVLLTMTEERGMEGAIGLRPNW-L--RSEILINTDTE 172 (487)
T ss_dssp -SS-SCCSSEEEEEESCTTTTCHHHHTCCSSC-C--CCSEEEECCCC
T ss_pred -CC-CCCCCEEEEEEeccccCCHHHHHHHHhc-c--CCCEEEEEccC
Confidence 23 4678999999999999999999988532 1 25667777764
No 51
>1ysj_A Protein YXEP; M20 family peptidase, dinuclear metal binding, structural GE PSI, protein structure initiative; 2.40A {Bacillus subtilis} SCOP: c.56.5.4 d.58.19.1
Probab=99.10 E-value=6.3e-10 Score=121.94 Aligned_cols=137 Identities=15% Similarity=0.150 Sum_probs=102.2
Q ss_pred HHHHHHHHHHHHcCCCCCCCCHHHHHHHHHHHHHHHhhccccCCcceEEEEeeeccCCCcccccccccCccccccccceE
Q 005255 86 ELEAMKHVKALTQLGPHAVGSDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYSDLNHI 165 (706)
Q Consensus 86 ~erA~~~L~~L~~igpR~~gS~~~~~a~~yL~~~l~~ig~~~~~~~~vevd~f~~~~g~~~~~g~~~~~~~~~y~~~~NV 165 (706)
.+++.+.+++|.++ |.+. .++.++.+||.++|+++|. +++.+. ....|+
T Consensus 31 ~~~~i~~~~~l~~i-ps~s--~~e~~~~~~l~~~l~~~G~------~v~~~~----------------------~~~~nv 79 (404)
T 1ysj_A 31 HTRLINMRRDLHEH-PELS--FQEVETTKKIRRWLEEEQI------EILDVP----------------------QLKTGV 79 (404)
T ss_dssp HHHHHHHHHHHHHS-CCCT--TCCHHHHHHHHHHHHHTTC------EECCCT----------------------TCSSCE
T ss_pred HHHHHHHHHHHHhc-CCCC--CChHHHHHHHHHHHHHcCC------ceEEec----------------------cCCceE
Confidence 46788899999986 4443 3456889999999999983 332210 023699
Q ss_pred EEEEcCCCCCCCCCCeEEEeecccccCCCC-----------C---CCCChhHHHHHHHHHHHHHhcCCCCCCcEEEEEeC
Q 005255 166 VLRILPKYASEAGENAILVSSHIDTVSAGE-----------G---AGDCSSCVAVMLELARVMSQWAHEFKNAVIFLFNT 231 (706)
Q Consensus 166 i~~i~g~~~~~~~~~~Vll~aH~DSv~~~p-----------G---A~Dd~sgva~~LE~ar~L~~~~~~p~~~I~flf~~ 231 (706)
+++++|+ .+.+.|++.+|+|+||... | +.|.+.|++++|++++.|.+.+.+++++|+|+|+.
T Consensus 80 ~a~~~g~----~~~~~i~l~~H~D~vp~~~~~~~Pf~~~~~g~l~g~G~kg~~a~~l~a~~~l~~~~~~~~~~v~~~~~~ 155 (404)
T 1ysj_A 80 IAEIKGR----EDGPVIAIRADIDALPIQEQTNLPFASKVDGTMHACGHDFHTASIIGTAMLLNQRRAELKGTVRFIFQP 155 (404)
T ss_dssp EEEEECS----SCCCEEEEEEECCCBSCCCCCCCTTCCSSTTCBCTTSHHHHHHHHHHHHHHHHTCGGGCSSEEEEEEES
T ss_pred EEEEeCC----CCCCEEEEEEecccccCCCCCCCCcccCCCCceEcCcChHHHHHHHHHHHHHHhccccCCceEEEEEec
Confidence 9999864 2347899999999998531 2 12345899999999999998766789999999999
Q ss_pred CCCCCCcChHHHHhcCCccCCceEEEEe
Q 005255 232 GEEEGLNGAHSFVTQHPWSTTIRVAVDL 259 (706)
Q Consensus 232 ~EE~gl~GS~~f~~~~~~~~~v~a~iNL 259 (706)
+||. ..|++.++++. ..+++.+++.+
T Consensus 156 ~EE~-~~G~~~~~~~g-~~~~~d~~i~~ 181 (404)
T 1ysj_A 156 AEEI-AAGARKVLEAG-VLNGVSAIFGM 181 (404)
T ss_dssp CTTT-TCHHHHHHHTT-TTTTEEEEEEE
T ss_pred cccc-chhHHHHHhcC-CCcCCCEEEEE
Confidence 9999 78999999642 23345666665
No 52
>2vpu_A TET3, 354AA long hypothetical operon protein FRV; unknown function, protease, thermophilic, SELF-compartmentalising, hydrolase; 1.9A {Pyrococcus horikoshii} PDB: 2wzn_A 2pe3_A
Probab=99.06 E-value=2.8e-09 Score=115.40 Aligned_cols=223 Identities=17% Similarity=0.184 Sum_probs=150.8
Q ss_pred HHHHHHHHHHcCCCCCCCCHHHHHHHHHHHHHHHhhccccCCcceEEEEeeeccCCCcccccccccCccccccccceEEE
Q 005255 88 EAMKHVKALTQLGPHAVGSDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYSDLNHIVL 167 (706)
Q Consensus 88 rA~~~L~~L~~igpR~~gS~~~~~a~~yL~~~l~~ig~~~~~~~~vevd~f~~~~g~~~~~g~~~~~~~~~y~~~~NVi~ 167 (706)
+.++.|++|+++ |.+.|.++ .++++|+.+++++++. ++++| +..|+++
T Consensus 10 ~~~~~l~~L~~i-pspSG~E~-~~v~~~l~~~l~~~g~------~~~~D------------------------~~GNvi~ 57 (354)
T 2vpu_A 10 VDWKLMQEIIEA-PGVSGYEH-LGIRDIVVDVLKEVAD------EVKVD------------------------KLGNVIA 57 (354)
T ss_dssp CCHHHHHHHHHS-CCBTTCGG-GTHHHHHHHHHHTTCS------EEEEC------------------------TTCCEEE
T ss_pred HHHHHHHHHHhC-CCCCcccH-HHHHHHHHHHHHHhCC------EEEEc------------------------CCCeEEE
Confidence 357889999996 67766543 2789999999999973 45543 3579999
Q ss_pred EEcCCCCCCCCCCeEEEeecccccCC--------C---------------------------------------------
Q 005255 168 RILPKYASEAGENAILVSSHIDTVSA--------G--------------------------------------------- 194 (706)
Q Consensus 168 ~i~g~~~~~~~~~~Vll~aH~DSv~~--------~--------------------------------------------- 194 (706)
+++|+ + +.|++.||+|+|+. +
T Consensus 58 ~~~g~-----~-~~v~l~aHmDtVg~mV~~I~~~G~l~~~~iGG~~~~~~~~~~v~i~t~~g~~~Gvi~~~~~H~~~~~~ 131 (354)
T 2vpu_A 58 HFKGS-----S-PRIMVAAHMDKIGVMVNHIDKDGYLHIVPIGGVLPETLVAQRIRFFTEKGERYGVVGVLPPHLRRGQE 131 (354)
T ss_dssp EECCS-----S-SEEEEECCCCBCEEEEEEECTTSCEEEEEESSCCGGGGTTCEEEEEETTEEEEEEECCCCSTTC----
T ss_pred EEcCC-----C-CEEEEEecccccceeEEEECCCCEEEEEccCCcccccccCCEEEEEcCCCcEEEEEcCCCccccCccc
Confidence 98764 1 68999999998762 0
Q ss_pred -------------------------------------------------CCCCCChhHHHHHHHHHHHHHhcCCCCCCcE
Q 005255 195 -------------------------------------------------EGAGDCSSCVAVMLELARVMSQWAHEFKNAV 225 (706)
Q Consensus 195 -------------------------------------------------pGA~Dd~sgva~~LE~ar~L~~~~~~p~~~I 225 (706)
..+-||..||++++|+++.+.+ ++.++
T Consensus 132 ~~~~~~~~~~l~iD~g~~s~ee~~~~GI~~Gd~v~~d~~~~~~~~~~i~s~~lDnr~g~~~~l~~l~~l~~----~~~~v 207 (354)
T 2vpu_A 132 DKGSKIDWDQIVVDVGASSKEEAEEMGFRVGTVGEFAPNFTRLNEHRFATPYLDDRICLYAMIEAARQLGD----HEADI 207 (354)
T ss_dssp -----CCGGGCCEECSCSSHHHHHHTTCCTTCEEEECCCCEECSSSEEECTTHHHHHHHHHHHHHHHHCCC----CSSEE
T ss_pred ccccCCCcceEEEEecCCCHHHHHhcCCCCCCEEEEeeEEEEeCCceEEEecCccHHHHHHHHHHHHHhhc----CCCeE
Confidence 3578999999999999998753 67999
Q ss_pred EEEEeCCCCCCCcChHHHHhcCCccCCceEEEEeecCcCCCCc-------------cccccCC-CHHHHHHHHHHccCCC
Q 005255 226 IFLFNTGEEEGLNGAHSFVTQHPWSTTIRVAVDLEAMGIGGRS-------------ALFQAGP-NLWAVENFAAVAKYPS 291 (706)
Q Consensus 226 ~flf~~~EE~gl~GS~~f~~~~~~~~~v~a~iNLD~~G~gg~~-------------~lfq~g~-~~~li~~y~~~a~~p~ 291 (706)
+++|++-||.|+.|++......+ . ..+|.+|+.-+..+. .+-++.. ++.+.+...+.++. .
T Consensus 208 ~~~ft~qEEVG~~ga~~aa~~i~--p--d~~i~~Dv~~a~dp~~~~~~~~~lg~Gpv~d~~~~~~~~l~~~l~~~a~~-~ 282 (354)
T 2vpu_A 208 YIVGSVQEEVGLRGARVASYAIN--P--EVGIAMDVTFAKQPHDKGKIVPELGKGPVMDVGPNINPKLRAFADEVAKK-Y 282 (354)
T ss_dssp EEEECSCCTTTSHHHHHHHHHHC--C--SEEEEEEEEECCCTTSTTCCCCCTTSCCEEEESTTSCHHHHHHHHHHHHH-T
T ss_pred EEEEECCcccCccchhhhhcccC--C--CEEEEecccccCCCCcccccCceECCcceEcCCCCCCHHHHHHHHHHHHH-c
Confidence 99999999999999886553211 1 246777764222111 1111122 66777766665421 1
Q ss_pred CcccccccccCCCCCCCCchHHHhh-cCCCeEEEEEeecCCCCCCCcCCCcCCCCHHHHHHHHHHHHHHHHHHhc
Q 005255 292 GQIIGQDLFASGVFETATDFQVYTE-VAGLSGLDFAYTDKSAVYHTKNDRLDLLKPGSLQHLGENMLDFLLQTAS 365 (706)
Q Consensus 292 ~~~l~~e~f~~g~ips~TD~~~F~~-~~GiPgld~a~~~~~~~YHT~~Dt~d~id~~sLq~~g~~~l~ll~~la~ 365 (706)
+...-.+... .+.+||-..+.. ..|+|..++..- .. +.|++ .|.++.+.+++..+.+.+++..+..
T Consensus 283 gIp~q~~~~~---g~gGtDa~~i~~a~~Gipt~~Igvp-~~-~~Hs~---~E~~~~~D~~~~~~ll~~~l~~l~~ 349 (354)
T 2vpu_A 283 EIPLQVEPSP---RPTGTDANVMQINKEGVATAVLSIP-IR-YMHSQ---VELADARDVDNTIKLAKALLEELKP 349 (354)
T ss_dssp TCCCEEEECC---SCCSSTHHHHHTSTTCCEEEEEEEE-EB-STTST---TCEEEHHHHHHHHHHHHHHHHHCCC
T ss_pred CCCcEEEeCC---CCCccHHHHHHHhcCCCCEEEECcc-cc-cCcCc---ceEeeHHHHHHHHHHHHHHHHhccH
Confidence 1111111111 124799888753 368999997532 22 37886 4677889999999999998887643
No 53
>3ram_A HMRA protein; two-domain, catalytic (alpha-beta-alpha) motif, tetramerisat (alpha,beta,BETA,alpha), endoprotease, hydrolase; 2.70A {Staphylococcus aureus}
Probab=98.97 E-value=2.1e-09 Score=117.64 Aligned_cols=142 Identities=14% Similarity=0.066 Sum_probs=101.6
Q ss_pred HHHHHHHHHHHHcCCCCCCCCHHHHHHHHHHHHHHHhhccccCCcceEEEEeeeccCCCcccccccccCccccccccceE
Q 005255 86 ELEAMKHVKALTQLGPHAVGSDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYSDLNHI 165 (706)
Q Consensus 86 ~erA~~~L~~L~~igpR~~gS~~~~~a~~yL~~~l~~ig~~~~~~~~vevd~f~~~~g~~~~~g~~~~~~~~~y~~~~NV 165 (706)
.+++.+.+++|.++ |- -|.++.++.+||.++|+++|. +++.+. . ....|+
T Consensus 15 ~~~~~~~~~~l~~~-pe--~s~~E~~~~~~i~~~l~~~G~------~v~~~~--~-------------------g~~~~v 64 (394)
T 3ram_A 15 KYSYIEISHRIHER-PE--LGNEEIFASRTLIDRLKEHDF------EIETEI--A-------------------GHATGF 64 (394)
T ss_dssp HHHHHHHHHHHHHS-CC--CTTCCHHHHHHHHHHHHHTTC------EEEEEE--T-------------------TEEEEE
T ss_pred HHHHHHHHHHHHhC-CC--CCcchHHHHHHHHHHHHHcCC------eEEeCC--C-------------------CCceEE
Confidence 46778888888885 33 355567899999999999983 444431 0 024699
Q ss_pred EEEEcCCCCCCCCCCeEEEeecccccCCCCCCCCChhHHHHHHHHHHHHHhcCCCCCCcEEEEEeCCCCCC-CcChH-HH
Q 005255 166 VLRILPKYASEAGENAILVSSHIDTVSAGEGAGDCSSCVAVMLELARVMSQWAHEFKNAVIFLFNTGEEEG-LNGAH-SF 243 (706)
Q Consensus 166 i~~i~g~~~~~~~~~~Vll~aH~DSv~~~pGA~Dd~sgva~~LE~ar~L~~~~~~p~~~I~flf~~~EE~g-l~GS~-~f 243 (706)
+++++|+ .+.+.|++.+|+|+||....+.+...-.+++|.+++.|.+.+.+++++|.|+|+.+||.| ..|++ .+
T Consensus 65 ia~~~g~----~~g~~i~l~ah~D~vpg~~ha~G~d~~~a~~l~aa~~L~~~~~~~~g~v~~~f~~~EE~~~~~Ga~~~~ 140 (394)
T 3ram_A 65 IATYDSG----LDGPAIGFLAEYDALPGLGHACGHNIIGTASVLGAIGLKQVIDQIGGKVVVLGCPAEEGGENGSAKASY 140 (394)
T ss_dssp EEEEECS----SSSCEEEEEECCCCCTTTSSTTCHHHHHHHHHHHHHHHHTTHHHHCSEEEEEECCCTTCCTTCCHHHHH
T ss_pred EEEEeCC----CCCCEEEEEEecccCCCcceECCccHHHHHHHHHHHHHHHhHhhCCceEEEEEECCccCCCCCchHHHH
Confidence 9999874 245789999999999832112222233467889999998765568899999999999998 58999 77
Q ss_pred HhcCCccCCceEEEEeecC
Q 005255 244 VTQHPWSTTIRVAVDLEAM 262 (706)
Q Consensus 244 ~~~~~~~~~v~a~iNLD~~ 262 (706)
+++ ...+++.+++.+|..
T Consensus 141 ~~~-g~~~~~d~~~~~h~~ 158 (394)
T 3ram_A 141 VKA-GVIDQIDIALMIHPG 158 (394)
T ss_dssp HHH-TGGGGCSEEECCEEE
T ss_pred HHc-CCcccCCEEEEECCc
Confidence 754 223456777777653
No 54
>3isx_A Endoglucanase; TM1050, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2, hydrolase; HET: MSE; 1.40A {Thermotoga maritima}
Probab=98.84 E-value=6.1e-08 Score=104.38 Aligned_cols=213 Identities=16% Similarity=0.262 Sum_probs=139.3
Q ss_pred HHHHHHHHcCCCCCCCCHHHHHHHHHHHHHHHhhccccCCcceEEEEeeeccCCCcccccccccCccccccccceEEEEE
Q 005255 90 MKHVKALTQLGPHAVGSDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYSDLNHIVLRI 169 (706)
Q Consensus 90 ~~~L~~L~~igpR~~gS~~~~~a~~yL~~~l~~ig~~~~~~~~vevd~f~~~~g~~~~~g~~~~~~~~~y~~~~NVi~~i 169 (706)
.+.|++|+++ |.+.|.+ +++++|+++++++++. ++++| +..|+++++
T Consensus 14 ~~~l~~L~~~-pspSG~E--~~v~~~i~~~l~~~~~------e~~~D------------------------~~Gnvi~~~ 60 (343)
T 3isx_A 14 KELIRKLTEA-FGPSGRE--EEVRSIILEELEGHID------GHRID------------------------GLGNLIVWK 60 (343)
T ss_dssp HHHHHHHHHS-CCBTTCC--HHHHHHHHHHHTTTCS------EEEEC------------------------TTCCEEEEE
T ss_pred HHHHHHHHhC-CCCCCch--HHHHHHHHHHHHHhCC------EEEEC------------------------CCCCEEEEE
Confidence 5678889886 7776654 6779999999999983 45543 457999987
Q ss_pred cCCCCCCCCCCeEEEeecccccCC--------C-----------------------------------------------
Q 005255 170 LPKYASEAGENAILVSSHIDTVSA--------G----------------------------------------------- 194 (706)
Q Consensus 170 ~g~~~~~~~~~~Vll~aH~DSv~~--------~----------------------------------------------- 194 (706)
|+ +.+.|++.||+|+++. +
T Consensus 61 -g~-----~~~~v~l~aHmDevG~mV~~I~~~G~l~~~~vGG~~~~~~~~~~v~i~t~~~Gvig~~~~H~~~~~~~~~~~ 134 (343)
T 3isx_A 61 -GS-----GEKKVILDAHIDEIGVVVTNVDDKGFLTIEPVGGVSPYMLLGKRIRFENGTIGVVGMEGETTEERQENVRKL 134 (343)
T ss_dssp -CC-----CSSEEEEEEECCBCEEEEEEECTTSCEEEEEESSCCHHHHTTCEEEETTSCEEEEEECCCSHHHHHHHHHTC
T ss_pred -CC-----CCCEEEEEecccccceEEEEECCCCeEEEEecCCcCccccCCcEEEEeccEEEEEecccccccChhhcccCC
Confidence 32 3468999999998752 0
Q ss_pred -----------------------------------------CCCCCChhHHHHHHHHHHHHHhcCCCCCCcEEEEEeCCC
Q 005255 195 -----------------------------------------EGAGDCSSCVAVMLELARVMSQWAHEFKNAVIFLFNTGE 233 (706)
Q Consensus 195 -----------------------------------------pGA~Dd~sgva~~LE~ar~L~~~~~~p~~~I~flf~~~E 233 (706)
..+-||..||++++|+++.+.. +.+++++|+.-|
T Consensus 135 ~~~~l~iD~g~~s~ee~~~~I~vGd~v~~~~~~~~~~~~i~s~~lDdR~g~~~~l~~l~~l~~-----~~~~~~~ft~qE 209 (343)
T 3isx_A 135 SFDKLFIDIGANSREEAQKMCPIGSFGVYDSGFVEVSGKYVSKAMDDRIGCAVIVEVFKRIKP-----AVTLYGVFSVQE 209 (343)
T ss_dssp CGGGEEEECSCSSHHHHHHHSCTTCEEEESCCCEEETTEEEESCHHHHHHHHHHHHHHHHCCC-----SSEEEEEEECCC
T ss_pred CcceEEEEeCCCCHHHHHhcCCCCCEEEecCceEEeccEEEeccCccHHHHHHHHHHHHhccC-----CCeEEEEEECCc
Confidence 2477999999999999998742 689999999999
Q ss_pred CCCCcChHHHHhcCCccCCceEEEEeecCcCCC-C--------------cccccc-CC--CHHHHHHHHHHccCCCCccc
Q 005255 234 EEGLNGAHSFVTQHPWSTTIRVAVDLEAMGIGG-R--------------SALFQA-GP--NLWAVENFAAVAKYPSGQII 295 (706)
Q Consensus 234 E~gl~GS~~f~~~~~~~~~v~a~iNLD~~G~gg-~--------------~~lfq~-g~--~~~li~~y~~~a~~p~~~~l 295 (706)
|.|+.|++......+ . ..+|.+|+.-++. + .+-... +. ++.+.+...+.++. .+...
T Consensus 210 EVG~~Ga~~aa~~i~--p--d~~i~vDv~~a~d~p~~~~~~~~~lg~GpvI~~~d~~~~~d~~l~~~l~~~A~~-~gIp~ 284 (343)
T 3isx_A 210 EVGLVGASVAGYGVP--A--DEAIAIDVTDSADTPKAIKRHAMRLSGGPALKVKDRASISSKRILENLIEIAEK-FDIKY 284 (343)
T ss_dssp CTTSCCSTTTGGGCC--C--SEEEEEEEEECCCSTTCCCTTCCCTTSCCEEECBTTCCHHHHHHHHHHHHHHHH-TTCCC
T ss_pred ccCchhHHHHhhcCC--C--CEEEEEeCcCCCCCCCcccccccccCCCcEEEEcCCCCCCCHHHHHHHHHHHHH-CCCCe
Confidence 999999986553221 2 2467777643221 1 111111 11 34555555554321 11110
Q ss_pred ccccccCCCCCCCCchHHHhh-cCCCeEEEEEeecCCCCCCCcCCCcCCCCHHHHHHHHHHHHHHH
Q 005255 296 GQDLFASGVFETATDFQVYTE-VAGLSGLDFAYTDKSAVYHTKNDRLDLLKPGSLQHLGENMLDFL 360 (706)
Q Consensus 296 ~~e~f~~g~ips~TD~~~F~~-~~GiPgld~a~~~~~~~YHT~~Dt~d~id~~sLq~~g~~~l~ll 360 (706)
-.+... ..+||-..+.. ..|+|..++..- .. +.||+ .|.++.+.++++.+.+.+++
T Consensus 285 Q~~v~~----ggGTDa~~i~~a~~Gipt~~Igvp-~r-~~Hs~---~E~~~~~Di~~~~~ll~~~l 341 (343)
T 3isx_A 285 QMEVLT----FGGTNAMGYQRTREGIPSATVSIP-TR-YVHSP---SEMIAPDDVEATVDLLIRYL 341 (343)
T ss_dssp EECCCB----CCCSSHHHHHHHTSSCCEEEEEEE-EB-STTST---TEEECHHHHHHHHHHHHHHH
T ss_pred EEecCC----CCchHHHHHHHhcCCCCEEEEccc-cc-cccch---hhEecHHHHHHHHHHHHHHH
Confidence 111111 25899877643 369999988542 22 37886 45677888888777776654
No 55
>3io1_A Aminobenzoyl-glutamate utilization protein; peptidase_M20D superfamily, protein structure initiative II, NYSGXRC, structural genomics; 2.50A {Klebsiella pneumoniae subsp}
Probab=98.79 E-value=5e-08 Score=108.40 Aligned_cols=160 Identities=15% Similarity=0.154 Sum_probs=102.3
Q ss_pred HHHHHHHHHHHHcCCCCCCCCHHHHHHHHHHHHHHHhhccccCCcceEEEEe--eecc--CCCc----------c-cccc
Q 005255 86 ELEAMKHVKALTQLGPHAVGSDALDRALQYVLAASQKIKESKHWEADVEVDF--FHAK--SGAN----------R-VGTG 150 (706)
Q Consensus 86 ~erA~~~L~~L~~igpR~~gS~~~~~a~~yL~~~l~~ig~~~~~~~~vevd~--f~~~--~g~~----------~-~~g~ 150 (706)
.++..+..++|.++ | .-+..+.++.+||.++|+++|. +++.+. .... .|.. + ...|
T Consensus 13 ~~~~~~~~~~lh~~-P--e~~~~E~~t~~~i~~~L~~~G~------~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 83 (445)
T 3io1_A 13 APSMTQWRRDFHLH-A--ESGWLEFRTASKVADILDGLGY------QLALGRDVIDADSRMGLPDEETLARAFERAREQG 83 (445)
T ss_dssp HHHHHHHHHHHHHT-C--CCTTCCHHHHHHHHHHHHHTTC------EEEEGGGTSCSTTCCSCCCHHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHHhC-C--CCCCcHHHHHHHHHHHHHHCCC------eEEecccccccccccccccchhhhhhhhhhcccc
Confidence 45677777888774 3 3355567899999999999983 333210 0000 0000 0 0000
Q ss_pred cccCcccccc--ccceEEEEEcCCCCCCCCCCeEEEeecccccCCC------------------CCCC---CChhHHHHH
Q 005255 151 VFKGKTLIYS--DLNHIVLRILPKYASEAGENAILVSSHIDTVSAG------------------EGAG---DCSSCVAVM 207 (706)
Q Consensus 151 ~~~~~~~~y~--~~~NVi~~i~g~~~~~~~~~~Vll~aH~DSv~~~------------------pGA~---Dd~sgva~~ 207 (706)
..+...... ...|++++++|+ .+.+.|++.+|+|+||.. +|.. +...++|++
T Consensus 84 -~~~~~~~~~~~~~~~vva~~~~~----~~g~~i~l~ah~Davp~~e~~~~~~~Pf~~~~~s~~~G~~h~cGhd~~~a~~ 158 (445)
T 3io1_A 84 -APERWLPAFEGGFAGVVATLDTG----RPGPTLAFRVDMDALDLNEQHDDSHRPHRDHFASCNAGMMHACGHDGHTAIG 158 (445)
T ss_dssp -CCTTTGGGGTTTCCCEEEEEECS----SCCCEEEEEEECCCCCC-------------------------CTTCTHHHHH
T ss_pred -ccccccccccCCCCEEEEEEeCC----CCCCEEEEEEecCCcCCCCCCCCCcCccccccccCCCCceEecCchHHHHHH
Confidence 000000011 358999999874 245789999999999842 1211 112469999
Q ss_pred HHHHHHHHhcCCCCCCcEEEEEeCCCCCCCcChHHHHhcCCccCCceEEEEeec
Q 005255 208 LELARVMSQWAHEFKNAVIFLFNTGEEEGLNGAHSFVTQHPWSTTIRVAVDLEA 261 (706)
Q Consensus 208 LE~ar~L~~~~~~p~~~I~flf~~~EE~gl~GS~~f~~~~~~~~~v~a~iNLD~ 261 (706)
|++++.|.+.+.+++.+|.|+|..+|| +..|++.++++. ..+++.+++.+|.
T Consensus 159 l~aa~~L~~~~~~~~g~v~l~f~p~EE-~~~Ga~~~i~~g-~~~~~d~~~~~h~ 210 (445)
T 3io1_A 159 LGLAHVLKQYAAQLNGVIKLIFQPAEE-GTRGARAMVAAG-VVDDVDYFTAIHI 210 (445)
T ss_dssp HHHHHHHHHTGGGCCSEEEEEEESCTT-TTCHHHHHHHTT-TTTTCSEEEEEEE
T ss_pred HHHHHHHHhCcCcCCceEEEEEecccc-ccchHHHHHHcC-CccccceeEEEec
Confidence 999999998777889999999999999 668999999542 3346777777753
No 56
>2wzn_A TET3, 354AA long hypothetical operon protein FRV; protease, hydrolase, thermophilic, SELF-compartmentalising; 1.90A {Pyrococcus horikoshii} PDB: 2pe3_A
Probab=98.50 E-value=2e-06 Score=88.86 Aligned_cols=57 Identities=14% Similarity=0.108 Sum_probs=44.3
Q ss_pred CCCCchHHHhh-cCCCeEEEEEeecCCCCCCCcCCCcCCCCHHHHHHHHHHHHHHHHHHhcCC
Q 005255 306 ETATDFQVYTE-VAGLSGLDFAYTDKSAVYHTKNDRLDLLKPGSLQHLGENMLDFLLQTASST 367 (706)
Q Consensus 306 ps~TD~~~F~~-~~GiPgld~a~~~~~~~YHT~~Dt~d~id~~sLq~~g~~~l~ll~~la~~~ 367 (706)
+.+||-..|.. ..|+|.+.+.-- .. ..||+. |.++.+.+++..+.+.+++++|...+
T Consensus 294 ~ggTDa~~~~~~~~Giptv~~G~g-~~-~~Ht~~---E~v~i~dl~~~~~ll~~~i~~L~~~d 351 (354)
T 2wzn_A 294 PTGTDANVMQINKEGVATAVLSIP-IR-YMHSQV---ELADARDVDNTIKLAKALLEELKPMD 351 (354)
T ss_dssp CCSSHHHHHHTSTTCCEEEEEEEE-EB-STTSTT---CEEEHHHHHHHHHHHHHHHHHCCCCC
T ss_pred ccccHHHHHHHhcCCCCEEEECcc-cC-CCCccc---EEEEHHHHHHHHHHHHHHHHhCcccc
Confidence 46799887743 269999997654 33 369964 78899999999999999999986543
No 57
>3iib_A Peptidase M28; YP_926796.1, structural genomics, J center for structural genomics, JCSG, protein structure INI PSI-2; HET: PGE; 1.70A {Shewanella amazonensis SB2B}
Probab=93.55 E-value=0.079 Score=58.57 Aligned_cols=42 Identities=26% Similarity=0.329 Sum_probs=38.6
Q ss_pred CCHHHHHHHHHHHH-cCCCCCCCCHHHHHHHHHHHHHHHhhcc
Q 005255 84 FSELEAMKHVKALT-QLGPHAVGSDALDRALQYVLAASQKIKE 125 (706)
Q Consensus 84 fs~erA~~~L~~L~-~igpR~~gS~~~~~a~~yL~~~l~~ig~ 125 (706)
++.+++++++++|+ .+|+|..||++++++.+|+.++|++.|.
T Consensus 18 ~~~~~~~~~l~~l~~~~G~R~~GS~g~~~a~~~i~~~l~~~G~ 60 (444)
T 3iib_A 18 QSSSLGYDIVESLTVEVGPRLAGSEQDKVAVDWAIAKLQSLGF 60 (444)
T ss_dssp HHCCHHHHHHHHHHHHTCCCCTTSHHHHHHHHHHHHHHHHTTC
T ss_pred hcccHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHcCC
Confidence 45578999999999 5999999999999999999999999985
No 58
>2ijz_A Probable M18-family aminopeptidase 2; putative aminopeptidase 2, structura genomics, PSI, protein structure initiative; 3.00A {Pseudomonas aeruginosa}
Probab=92.43 E-value=0.25 Score=54.49 Aligned_cols=151 Identities=13% Similarity=0.025 Sum_probs=86.5
Q ss_pred CCCCCCChhHHHHHHHHHHHHHhcCCCCCCcEEEEEeCCCCCCCcChHHHHhcC-Cc-cCCc-------------eEEEE
Q 005255 194 GEGAGDCSSCVAVMLELARVMSQWAHEFKNAVIFLFNTGEEEGLNGAHSFVTQH-PW-STTI-------------RVAVD 258 (706)
Q Consensus 194 ~pGA~Dd~sgva~~LE~ar~L~~~~~~p~~~I~flf~~~EE~gl~GS~~f~~~~-~~-~~~v-------------~a~iN 258 (706)
...+-||..||+++||+++.+. +++.+++++| +-||.|..|++.-.... +. .+++ ..+|.
T Consensus 230 ~s~~lDdr~~~~~~l~al~~~~----~~~~~v~~~f-d~EEVGs~ga~gA~s~~~~~~l~ri~~~~~~~~~~~~~s~~is 304 (428)
T 2ijz_A 230 AGARLDNLLSCHAGLEALLNAE----GDENCILVCT-DHEEVGSCSHCGADGPFLEQVLRRLLPEGDAFSRAIQRSLLVS 304 (428)
T ss_dssp SCCCSSCSSTTTTTTTHHHHTT----SCSSSCEEEE-CBSCTTTTCHHHHSSCCTTTSCCSSSSSSSSSTTTTTSCCEEE
T ss_pred EeecCccHHHHHHHHHHHHhcc----cCCceEEEEE-eccccCccchhhhhccccHHHHHHhhhhhhHHHhhhhcCEEEE
Confidence 3568899999999999999764 3567888888 99999999988754322 21 0111 57888
Q ss_pred eecCcCCCCc------------------ccc---ccC-CCHHHHHHHHHH---ccCCCCcccccccccCCCCCCCCchHH
Q 005255 259 LEAMGIGGRS------------------ALF---QAG-PNLWAVENFAAV---AKYPSGQIIGQDLFASGVFETATDFQV 313 (706)
Q Consensus 259 LD~~G~gg~~------------------~lf---q~g-~~~~li~~y~~~---a~~p~~~~l~~e~f~~g~ips~TD~~~ 313 (706)
.|++-+..+. +-. |.+ +++.+...+.+. ..-|+-. +..+ ...+.+||-.+
T Consensus 305 ~Dv~ha~~Pn~~~~~~~~~~~~lg~G~vIk~~~~~~~~~~~~~~~~l~~~a~~~~Ip~Q~----~~~~-~d~~gGsd~g~ 379 (428)
T 2ijz_A 305 ADNAHGVHPNYADRHDANHGPALNGGPVIKINSNQRYATNSETAGFFRHLCQDSEVPVQS----FVTR-SDMGCGSTIGP 379 (428)
T ss_dssp ECCCCCCCSSCGGGCCSSCCCSSSCCCBCCCCSSSCCSCCHHHHTTTTHHHHHTCCCCCB----CCCC-SSCCCCCCCST
T ss_pred EecccccCCCCcccccccCCcccCCCcEEEEECCCCCCCCHHHHHHHHHHHHHcCCCeEE----EEEe-CCCCccchHHH
Confidence 8875542221 111 111 244444333222 2233211 1111 11356788777
Q ss_pred Hhh-cCCCeEEEEEeecCCCCCCCcCCCcCCCCHHHHHHHHHHHHHH
Q 005255 314 YTE-VAGLSGLDFAYTDKSAVYHTKNDRLDLLKPGSLQHLGENMLDF 359 (706)
Q Consensus 314 F~~-~~GiPgld~a~~~~~~~YHT~~Dt~d~id~~sLq~~g~~~l~l 359 (706)
+.. ..|+|.+|+.. +--+-||+.-+...-| +.++.+.+.++
T Consensus 380 i~~~~~Gi~tvdiGi--p~~~mHS~~E~~~~~D---~~~~~~ll~af 421 (428)
T 2ijz_A 380 ITASQVGVRTVDIGL--PTFAMHSIRELAGSHD---LAHLVKVLGAF 421 (428)
T ss_dssp TTGGGGSCCEEEECC--CCCSCSSSSCCCCSSH---HHHHHTTHHHH
T ss_pred HHHhCCCCCEEEEch--hhcccchHHHHhhHHH---HHHHHHHHHHH
Confidence 743 47999999753 2234698776655544 44444434333
No 59
>2glf_A Probable M18-family aminopeptidase 1; putative, NYSGXRC, structural genomics, PS protein structure initiative; 2.80A {Thermotoga maritima}
Probab=92.24 E-value=0.18 Score=55.82 Aligned_cols=150 Identities=11% Similarity=-0.009 Sum_probs=85.3
Q ss_pred CCCCChhHHHHHHHHHHHHHhcCCCCCCcEEEEEeCCCCCCCcChHHHHhcC-------------C--------ccCCce
Q 005255 196 GAGDCSSCVAVMLELARVMSQWAHEFKNAVIFLFNTGEEEGLNGAHSFVTQH-------------P--------WSTTIR 254 (706)
Q Consensus 196 GA~Dd~sgva~~LE~ar~L~~~~~~p~~~I~flf~~~EE~gl~GS~~f~~~~-------------~--------~~~~v~ 254 (706)
++-||..||.+++|+++.+ +++.++++++++-||.|+.|++.-.... + ..-.-.
T Consensus 246 ~~lDnr~~~~~~l~al~~~-----~~~~~~~~~~~d~EEVGs~ga~gA~s~~l~~~l~ri~~~~~~~~~~~~~~~~l~~s 320 (450)
T 2glf_A 246 YGQDDRICAYTALRALLSA-----NPEKSIGVIFFDKEEIGSDGNTGAKARFYLKALRQILKMQGAKDSEFVLDEVLENT 320 (450)
T ss_dssp TTHHHHHHHHHHHHHHHHC-----CCSSCEEEEEESCGGGTSCSSSSSSSSHHHHHHHHHHHHTTCSSSHHHHHHHHHSC
T ss_pred ecchhhHHHHHHHHHHHhc-----CCCceEEEEEEcccccCCcchhhhcchhHHHHHHHHHHhhccccchHHHHHhhcCC
Confidence 5779999999999999875 3578999999999999988776432110 0 000123
Q ss_pred EEEEeecCcCCCC------------------ccccccC---------CCHHHHHHHHHHc---cCCCCcccccccccCC-
Q 005255 255 VAVDLEAMGIGGR------------------SALFQAG---------PNLWAVENFAAVA---KYPSGQIIGQDLFASG- 303 (706)
Q Consensus 255 a~iNLD~~G~gg~------------------~~lfq~g---------~~~~li~~y~~~a---~~p~~~~l~~e~f~~g- 303 (706)
.+|..|++-+..+ .+-..++ +++.+...+.+.+ .-|+ |. |..|
T Consensus 321 ~~iS~DvahA~~Pn~~~~~~~~~~~~lg~Gpvik~~~~a~~~y~t~~~~~~~~~~~~~ia~~~~Ip~-----Q~-~~~gr 394 (450)
T 2glf_A 321 SVISGDVCAAVNPPYKDVHDLHNAPKLGYGVALVKYTGARGKYSTNDAHAEFVARVRKVLNEQGVIW-----QV-ATLGK 394 (450)
T ss_dssp EEEEECCEECCCGGGGGGSCGGGCCCTTSCEEEESBCCSTTSTTCCBCCHHHHHHHHHHHHHTTCCE-----EE-CCSSS
T ss_pred eEEEEecccCcCCCCcccccccCCccCCcCCEEEEECCCCcccccccCCHHHHHHHHHHHHHcCCCE-----EE-EEecc
Confidence 4566665433211 1111112 2455544444432 2222 21 1111
Q ss_pred -CCCCCCchHHHhhcCCCeEEEEEeecCCCCCCCcCCCcCCCCHHHHHHHHHHHHHHHH
Q 005255 304 -VFETATDFQVYTEVAGLSGLDFAYTDKSAVYHTKNDRLDLLKPGSLQHLGENMLDFLL 361 (706)
Q Consensus 304 -~ips~TD~~~F~~~~GiPgld~a~~~~~~~YHT~~Dt~d~id~~sLq~~g~~~l~ll~ 361 (706)
..+++||-.++....|+|.+|+.-- --+-||+.-+... ..+.++.+.+.+++.
T Consensus 395 ~d~~gGstig~i~a~~Gi~tvdiGiP--~l~MHS~~E~~~~---~D~~~~~~l~~af~~ 448 (450)
T 2glf_A 395 VDQGGGGTIAKFFAERGSDVIDMGPA--LLGMHSPFEISSK---ADLFETYVAYRSLME 448 (450)
T ss_dssp TTSCCCCCTHHHHHTTTSCEEEEECE--EBSTTSSSEEEEH---HHHHHHHHHHHHHHH
T ss_pred CCCCCCCcHHHHHhCCCCcEEEechh--hcccchHHHHhhH---HHHHHHHHHHHHHHH
Confidence 2456777777665589999998632 1235998766654 444455555555444
No 60
>3fed_A Glutamate carboxypeptidase III; metallopeptidase, bimetallic active site, N-glycosylation, C cation, chloride anion, zinc IONS, dipept glycoprotein; HET: NAG BIX; 1.29A {Homo sapiens} PDB: 3fec_A* 3fee_A* 3ff3_A* 2c6c_A* 2c6g_A* 2c6p_A* 2cij_A* 2jbj_A* 2jbk_A* 3rbu_A* 3bi1_A* 2oot_A* 2pvv_A* 2pvw_A* 2xei_A* 2or4_A* 3bi0_A* 3bhx_A* 3d7d_A* 3d7f_A* ...
Probab=87.67 E-value=0.72 Score=53.95 Aligned_cols=43 Identities=14% Similarity=0.180 Sum_probs=40.2
Q ss_pred CCCCHHHHHHHHHHHHcCCCCCCCCHHHHHHHHHHHHHHHhhcc
Q 005255 82 RGFSELEAMKHVKALTQLGPHAVGSDALDRALQYVLAASQKIKE 125 (706)
Q Consensus 82 ~~fs~erA~~~L~~L~~igpR~~gS~~~~~a~~yL~~~l~~ig~ 125 (706)
..++.++++++|+.++++ ||..||+++.++++|+.+++++.|.
T Consensus 20 ~~~~~~~i~~~l~~lt~~-ph~aGt~~~~~~a~yi~~~~~~~Gl 62 (707)
T 3fed_A 20 SEMKAENIKSFLRSFTKL-PHLAGTEQNFLLAKKIQTQWKKFGL 62 (707)
T ss_dssp HHCCHHHHHHHHHHHSSS-CCCTTSHHHHHHHHHHHHHHHHHTC
T ss_pred HhCCHHHHHHHHHHHhcC-CCcCCCHhHHHHHHHHHHHHHHcCC
Confidence 468999999999999985 9999999999999999999999985
No 61
>3vat_A Dnpep, aspartyl aminopeptidase; alpha-beta-alpha sandwich, binuclea center, M18 peptidase, MH CLAN, tetrahedral aminopeptidase, hydrolase; 2.10A {Bos taurus} PDB: 3var_A 3l6s_A* 4dyo_A*
Probab=83.04 E-value=1.4 Score=49.33 Aligned_cols=158 Identities=11% Similarity=-0.006 Sum_probs=83.4
Q ss_pred CCCCChhHHHHHHHHHHHHHhcC----CCCCCcEEEEEeCCCCCCCcChHHHHhcC-Cc-----------------cCCc
Q 005255 196 GAGDCSSCVAVMLELARVMSQWA----HEFKNAVIFLFNTGEEEGLNGAHSFVTQH-PW-----------------STTI 253 (706)
Q Consensus 196 GA~Dd~sgva~~LE~ar~L~~~~----~~p~~~I~flf~~~EE~gl~GS~~f~~~~-~~-----------------~~~v 253 (706)
++-||..||.+++|+++.+.+.. ..+. ..++++++-||.|+.|++.-.... |. .-.-
T Consensus 282 ~~lDnr~~~~~~leaL~~~~~~~~~~~~~~~-~~v~v~~dqEEVGs~ga~gA~s~~~pdvl~ri~~~~~~~~~~~~~l~~ 360 (496)
T 3vat_A 282 PRLDNLHSCFCALQALIDSCSAPASLAADPH-VRMIALYDNEEVGSESAQGAQSLLTELVLRRISASPQHLTAFEEAIPK 360 (496)
T ss_dssp TTHHHHHHHHHHHHHHHHHTTSHHHHHHCCS-EEEEEEESCGGGTSCSSSSTTSTHHHHHHHHHHCCSSCTTHHHHHGGG
T ss_pred eccccHHHHHHHHHHHHhhhccccccccCCC-cEEEEEEccCCcCCCcchhccccccHHHHHHHHhccCchHHHHHHhhc
Confidence 57799999999999998775310 0123 444999999999987766532110 10 0012
Q ss_pred eEEEEeecCcCC------------------CCccccc-c---CCCHHHHHHHHHHc---cCCCCcccccccccCCCCC-C
Q 005255 254 RVAVDLEAMGIG------------------GRSALFQ-A---GPNLWAVENFAAVA---KYPSGQIIGQDLFASGVFE-T 307 (706)
Q Consensus 254 ~a~iNLD~~G~g------------------g~~~lfq-~---g~~~~li~~y~~~a---~~p~~~~l~~e~f~~g~ip-s 307 (706)
..+|..|++-+. |+.+-+. . .+++.+...+.+.+ .-|+-..+ .....+ +
T Consensus 361 S~~IS~DvahA~dPn~~~~~~~~~~~~LG~GpvIK~~~~~~y~t~~~~~~~l~~ia~~~~Ip~Q~~v-----~r~D~~gG 435 (496)
T 3vat_A 361 SYMISADMAHAVHPNYLDKHEENHRPLFHKGPVIKVNSKQRYASNAVSEALIREVASSVGVPLQDLM-----VRNDSPCG 435 (496)
T ss_dssp CEEEEECCEECCBTTBGGGSCTTCCCCTTSCCEEECCTTTTSCCCHHHHHHHHHHHHHHTCCCEEEC-----CCTTSCCC
T ss_pred CeEEEEeCCCCCCCCCcccccccCCcccCcCCEEEEcCCCCcccCHHHHHHHHHHHHHcCCCEEEEE-----ecCCCCCc
Confidence 367777764221 1111111 1 12454444444332 33332111 111123 3
Q ss_pred CCchHHHhhcCCCeEEEEEeecCCCCCCCcCCCcCCCCHHHHHHHHHHHHHHHHHHh
Q 005255 308 ATDFQVYTEVAGLSGLDFAYTDKSAVYHTKNDRLDLLKPGSLQHLGENMLDFLLQTA 364 (706)
Q Consensus 308 ~TD~~~F~~~~GiPgld~a~~~~~~~YHT~~Dt~d~id~~sLq~~g~~~l~ll~~la 364 (706)
+|+-.+.....|+|.+++.-- --+-||+.-+.+.-|. +++.+.+.+++..+.
T Consensus 436 gTig~i~~s~~Gi~tvdIGiP--~ryMHS~~E~~~~~D~---~~~v~Ll~af~~~~~ 487 (496)
T 3vat_A 436 TTIGPILASRLGLRVLDLGSP--QLAMHSIRETACTTGV---LQTITLFKGFFELFP 487 (496)
T ss_dssp CCHHHHHHHHHTCEEEEEECE--EESTTSSSEEEESHHH---HHHHHHHHHHHHHHH
T ss_pred chHHHHHhcccCCcEEEecHh--hhccccHHHHhhHHHH---HHHHHHHHHHHHhHH
Confidence 444433332379999998531 1146998776665554 455555555555543
No 62
>3kas_A Transferrin receptor protein 1; transferrin receptor 1, arenavirus, cell MEMB disulfide bond, endocytosis, HOST-virus inter receptor, secreted, transmembrane; HET: NAG FUC BMA MAN; 2.40A {Homo sapiens} PDB: 1de4_C* 3s9l_A* 3s9m_A* 3s9n_A* 1cx8_A* 1suv_A 2nsu_A
Probab=82.32 E-value=0.45 Score=54.99 Aligned_cols=44 Identities=20% Similarity=0.243 Sum_probs=39.6
Q ss_pred CCCHHHHHHHHHHHHc--CCCCCCCCHHHHHHHHHHHHHHHhhccc
Q 005255 83 GFSELEAMKHVKALTQ--LGPHAVGSDALDRALQYVLAASQKIKES 126 (706)
Q Consensus 83 ~fs~erA~~~L~~L~~--igpR~~gS~~~~~a~~yL~~~l~~ig~~ 126 (706)
.++++++++||+.|++ +++|..||++++++++||.+++++.|.+
T Consensus 14 ~i~~~~i~~~L~~Lssd~~~~R~aGT~g~~~aa~yI~~~f~~~Gl~ 59 (640)
T 3kas_A 14 KLDSTDFTSTIKLLNENSYVPREAGSQKDENLALYVENQFREFKLS 59 (640)
T ss_dssp HHHTCCHHHHHHHTTSTTTSSCCTTSHHHHHHHHHHHHHHHHHTCS
T ss_pred hCCHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHHHHHHHcCCc
Confidence 3566789999999998 5899999999999999999999999863
No 63
>2glj_A Probable M18-family aminopeptidase 1; aminopeptidase I, NYSGXRC, structural genomics, PSI, protein structure initiative; 3.20A {Clostridium acetobutylicum}
Probab=78.72 E-value=0.67 Score=51.50 Aligned_cols=45 Identities=24% Similarity=0.222 Sum_probs=37.9
Q ss_pred CCCCChhHHHHHHHHHHHHHhcCCCCCCcEEEEEeCCCCCCCcChHHHH
Q 005255 196 GAGDCSSCVAVMLELARVMSQWAHEFKNAVIFLFNTGEEEGLNGAHSFV 244 (706)
Q Consensus 196 GA~Dd~sgva~~LE~ar~L~~~~~~p~~~I~flf~~~EE~gl~GS~~f~ 244 (706)
++-||..||.++||+++.+. .+++++++++++-||.|..|++.-.
T Consensus 258 ~~lDdr~~~~~~l~al~~~~----~~~~~~~~~~~d~EEVGs~ga~ga~ 302 (461)
T 2glj_A 258 YGQDDRICAYTSFEAMLEMK----NAKKTCITILVDKEEVGSIGATGMQ 302 (461)
T ss_dssp TTHHHHHHHHHHHHHHHTCC----SCSSCEEEEEECCGGGTCCTTTTSS
T ss_pred ecchhHHHHHHHHHHHHhhc----cCCCeEEEEEEccCCCCCccccccc
Confidence 56799999999999988653 4678999999999999998876543
No 64
>1y7e_A Probable M18-family aminopeptidase 1; aminopeptidase I, borrelia burgdorferi B31, YSCI, structural genomics, PSI; 3.20A {Borrelia burgdorferi} SCOP: b.49.3.1 c.56.5.4
Probab=76.21 E-value=0.43 Score=52.96 Aligned_cols=45 Identities=22% Similarity=0.234 Sum_probs=31.8
Q ss_pred CCCCChhHHHHHHHHHHHHHhcCCCCCCcEEEEEeCCCCCCCcChHHH
Q 005255 196 GAGDCSSCVAVMLELARVMSQWAHEFKNAVIFLFNTGEEEGLNGAHSF 243 (706)
Q Consensus 196 GA~Dd~sgva~~LE~ar~L~~~~~~p~~~I~flf~~~EE~gl~GS~~f 243 (706)
++-||..||+++||+++.+.+ .+++++++++++-||.|..|++.-
T Consensus 252 ~~lDdr~~~~~~l~al~~~~~---~~~~~~~~~~~d~EEVGs~ga~ga 296 (458)
T 1y7e_A 252 YGQDDKICVFTSLESIFDLEE---TPNKTAICFLVDKEEIGSTGSTGL 296 (458)
T ss_dssp SSHHHHHHHHHHHHHHSSSSC---CCSSCEECCCBCSTTC--------
T ss_pred ecCccHHHHHHHHHHHHhhhc---cCCceEEEEEEcccccCcccchhh
Confidence 467999999999999886532 467899999999999999888754
No 65
>1q7l_B Aminoacylase-1; catalysis, enzyme dimerization, site- directed mutagenesis, structure comparison, zinc, hydrolase; 1.40A {Homo sapiens} SCOP: c.56.5.4
Probab=50.54 E-value=27 Score=28.80 Aligned_cols=59 Identities=17% Similarity=0.196 Sum_probs=46.2
Q ss_pred CCCCCchHHHhhcCCCeEEEEEeecCC-CCCCCcCCCcCCCCHHHHHHHHHHHHHHHHHHhcCC
Q 005255 305 FETATDFQVYTEVAGLSGLDFAYTDKS-AVYHTKNDRLDLLKPGSLQHLGENMLDFLLQTASST 367 (706)
Q Consensus 305 ips~TD~~~F~~~~GiPgld~a~~~~~-~~YHT~~Dt~d~id~~sLq~~g~~~l~ll~~la~~~ 367 (706)
.+..||-+.|.+ .|+|.+.+.-.... ..-|+. =|+++.+.+.+..+....+++++++.+
T Consensus 23 ~~g~TDar~~~~-~gip~v~fGPg~~~~~~~H~~---dE~v~i~~l~~~~~iy~~~i~~~~~~~ 82 (88)
T 1q7l_B 23 MPAAGDNRYIRA-VGVPALGFSPMNRTPVLLHDH---DERLHEAVFLRGVDIYTRLLPALASVP 82 (88)
T ss_dssp CCSCSHHHHHHH-TTCCEEEECCCCSCCCCTTST---TCEEEHHHHHHHHHHHHHHHHHHHTCC
T ss_pred eceeCcHHHHHH-cCCCEEEECCCCCCcccccCC---CCeeEHHHHHHHHHHHHHHHHHHHcCC
Confidence 467899999998 79999887543321 245765 367889999999999999999998863
No 66
>2lx0_A Membrane fusion protein P14; membrane fusion protein transmembrane domain, P14 fast prote ARCH, micelle-peptide complex, membrane protein; NMR {Synthetic}
Probab=40.78 E-value=25 Score=23.32 Aligned_cols=18 Identities=17% Similarity=0.383 Sum_probs=16.1
Q ss_pred HHHHHHHHHHHHHHHHHH
Q 005255 631 VIFAVVIAVVSCLTLVYL 648 (706)
Q Consensus 631 ~~ia~~~a~~~~l~~~~l 648 (706)
-+||.++|+.+++.++|-
T Consensus 7 eviaglvalltflafgfw 24 (32)
T 2lx0_A 7 EVIAGLVALLTFLAFGFW 24 (32)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 589999999999999984
No 67
>2ijz_A Probable M18-family aminopeptidase 2; putative aminopeptidase 2, structura genomics, PSI, protein structure initiative; 3.00A {Pseudomonas aeruginosa}
Probab=37.30 E-value=16 Score=39.97 Aligned_cols=75 Identities=15% Similarity=0.115 Sum_probs=42.8
Q ss_pred CCCCHHHHHHHHHHHHHHHhhccccCCcceEEEEeeeccCCCcccccccccCccccccccceEEEEEcCCCCCCCCCCeE
Q 005255 103 AVGSDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYSDLNHIVLRILPKYASEAGENAI 182 (706)
Q Consensus 103 ~~gS~~~~~a~~yL~~~l~~ig~~~~~~~~vevd~f~~~~g~~~~~g~~~~~~~~~y~~~~NVi~~i~g~~~~~~~~~~V 182 (706)
...|+..-.+++++.++|++.|.+.-.+ .+.+.-.+|. .++ .-.+..|+++...|++- ...++.+
T Consensus 12 l~~~~t~~h~v~~~~~~l~~~Gf~~l~e----~~~w~l~~g~-----k~~-----~~~~~g~lia~~~G~~~-~~~~~~~ 76 (428)
T 2ijz_A 12 LKASPTPFHATASLARRLEAAGYRRLDE----RDAWHTETGG-----RYY-----VTRNDSSLIAIRLGRRS-PLESGFR 76 (428)
T ss_dssp STTTHHHHHHHCCSHHHHHHHHHHHSCC------------CC-----CCE-----ECTTTTCCEEEECC--C-CSTTCCE
T ss_pred HHcCCCHHHHHHHHHHHHHHcCCeEccc----ccccccCCCC-----EEE-----EECCCCEEEEEEECCcC-CCCCCcE
Confidence 3457777789999999999998643221 1211111110 111 11234799998877520 1134689
Q ss_pred EEeecccccC
Q 005255 183 LVSSHIDTVS 192 (706)
Q Consensus 183 ll~aH~DSv~ 192 (706)
+++||.|++.
T Consensus 77 ii~AH~Dspg 86 (428)
T 2ijz_A 77 LVGAHTDSPC 86 (428)
T ss_dssp EEECBCCCSE
T ss_pred EEEEcCCcCC
Confidence 9999999974
No 68
>2glf_A Probable M18-family aminopeptidase 1; putative, NYSGXRC, structural genomics, PS protein structure initiative; 2.80A {Thermotoga maritima}
Probab=37.15 E-value=64 Score=35.47 Aligned_cols=68 Identities=10% Similarity=-0.025 Sum_probs=39.7
Q ss_pred CHHHHHHHHHHHHHHHhhccccCCcceEEEEeeeccCCCcccccccccCccccccccceEEEEEcCCCCCCCCCCeEEEe
Q 005255 106 SDALDRALQYVLAASQKIKESKHWEADVEVDFFHAKSGANRVGTGVFKGKTLIYSDLNHIVLRILPKYASEAGENAILVS 185 (706)
Q Consensus 106 S~~~~~a~~yL~~~l~~ig~~~~~~~~vevd~f~~~~g~~~~~g~~~~~~~~~y~~~~NVi~~i~g~~~~~~~~~~Vll~ 185 (706)
|+..-.+++++.++|++.|.+.-.+. +. -..| +.+| .-.+..|+++...|+ ...++.+|++
T Consensus 30 s~t~~h~v~~~~~~l~~~Gf~~l~e~----~~--l~~g-----~k~~-----~~r~~~~lia~~~g~---~~~~g~~ii~ 90 (450)
T 2glf_A 30 AKTERMTVKEIKRILDESGFVPLEDF----AG--DPMN-----MTVY-----AVNRGKAIAAFRVVD---DLKRGLNLVV 90 (450)
T ss_dssp CSSHHHHHHHHHHHHHTTTCEETTSC----CS--CTTS-----BCEE-----EESSSSCEEEEEBCS---CGGGCCEEEE
T ss_pred CCCHHHHHHHHHHHHHHCcCEEcccc----cC--CCCC-----CEEE-----EEcCCCEEEEEEeCC---CCCCCeEEEE
Confidence 33445679999999999986322111 10 0111 1111 111347999987764 1124689999
Q ss_pred ecccccC
Q 005255 186 SHIDTVS 192 (706)
Q Consensus 186 aH~DSv~ 192 (706)
||.|++.
T Consensus 91 AH~Dsp~ 97 (450)
T 2glf_A 91 AHIDSPR 97 (450)
T ss_dssp EECCCCE
T ss_pred EecccCC
Confidence 9999873
No 69
>2l8s_A Integrin alpha-1; transmembrane region, detergent micelle, CE adhesion; NMR {Homo sapiens}
Probab=37.12 E-value=54 Score=25.36 Aligned_cols=36 Identities=17% Similarity=0.441 Sum_probs=16.5
Q ss_pred CCCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHhCCc
Q 005255 621 PGGTPEWLGNVIFAVVIAVVSCLTLVYLLSYVHLSGAK 658 (706)
Q Consensus 621 ~~~~P~~~~d~~ia~~~a~~~~l~~~~l~p~~~~~~~~ 658 (706)
|..+|-|+ .++|++.++..+..+.+++=-+-.|+|+
T Consensus 4 ~~~vp~Wi--Ii~svl~GLLLL~Lii~~LwK~GFFKR~ 39 (54)
T 2l8s_A 4 PGRVPLWV--ILLSAFAGLLLLMLLILALWKIGFFKRP 39 (54)
T ss_dssp CCCCCTHH--HHHHHHHHHHHHHHHHHHHHHHHHTTSC
T ss_pred CccCchHH--HHHHHHHHHHHHHHHHHHHHHcCcccCC
Confidence 33477774 4444444433333333333334445554
No 70
>2knc_A Integrin alpha-IIB; transmembrane signaling, protein structure, cell A cleavage on PAIR of basic residues, disease mutation, disul bond, glycoprotein; NMR {Homo sapiens}
Probab=23.18 E-value=1.4e+02 Score=23.13 Aligned_cols=34 Identities=21% Similarity=0.279 Sum_probs=15.2
Q ss_pred CCCccchhHHHHHHHHHHHHHHHHHHHHHHHHhCCc
Q 005255 623 GTPEWLGNVIFAVVIAVVSCLTLVYLLSYVHLSGAK 658 (706)
Q Consensus 623 ~~P~~~~d~~ia~~~a~~~~l~~~~l~p~~~~~~~~ 658 (706)
.+|-|+ +++|++.++..+..+.+++=-+-.|+|+
T Consensus 9 ~vp~wi--Ii~svl~GLllL~li~~~LwK~GFFkR~ 42 (54)
T 2knc_A 9 AIPIWW--VLVGVLGGLLLLTILVLAMWKVGFFKRN 42 (54)
T ss_dssp TCCHHH--HHHHHHHHHHHHHHHHHHHHHHHHTTTT
T ss_pred CcchHH--HHHHHHHHHHHHHHHHHHHHHcCcccCC
Confidence 467674 4444444433333333333333445543
No 71
>3pfo_A Putative acetylornithine deacetylase; metal binding, merops M20A family, amino-acid biosynthesis, metallopeptidase; 1.90A {Rhodopseudomonas palustris}
Probab=20.41 E-value=54 Score=34.98 Aligned_cols=57 Identities=14% Similarity=0.153 Sum_probs=43.3
Q ss_pred CCCCchHHHhhcCCCeEEEEEeecCCCCCCCcCCCcCCCCHHHHHHHHHHHHHHHHHHhcCC
Q 005255 306 ETATDFQVYTEVAGLSGLDFAYTDKSAVYHTKNDRLDLLKPGSLQHLGENMLDFLLQTASST 367 (706)
Q Consensus 306 ps~TD~~~F~~~~GiPgld~a~~~~~~~YHT~~Dt~d~id~~sLq~~g~~~l~ll~~la~~~ 367 (706)
...+|...|.+..|+|++.+. ......|++. ++++.+.+....+.+..++.++++.+
T Consensus 375 ~g~~D~~~~~~~~giP~v~~G--p~~~~~H~~~---E~i~~~~l~~~~~~~~~~i~~~~~~~ 431 (433)
T 3pfo_A 375 TAVNDTRYYSVDYGIPALCYG--PYGQGPHAFD---ERIDLESLRKTTLSIALFVAEWCGLR 431 (433)
T ss_dssp SSCCTHHHHHHTTCCCEEECC--CCEECTTSTT---CEEEHHHHHHHHHHHHHHHHHHHCEE
T ss_pred eeeccHHHHHhhCCCCEEEEC--CCCccCCCCC---ceEEHHHHHHHHHHHHHHHHHHhccC
Confidence 457999999875699998532 2234568764 57789999999999999999987643
Done!