Citrus Sinensis ID: 005257

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-----
Protein Sequence
MKNHPKPLLFSLLLSIFLSFESISAVDFVFNGFNSSNLSLYGTATVESRILTLTNSTTFTIGRALYPSKIPTKRPNSSYVYPFSTSFIFAMAPYKGVLAGHGLVFLFVPFHGIKGATEAQHLGLFNRTNDGNSSNHVFGVEFDVFKNQEFNDIDENHVGIDVNSLTSVSAHAAGYWPDNQTDSSGSNSNSGTGDDEKSFKELKLNNGKNYQVWIDYADSFINITMVEAGMKRPKRPLLSVPLNLSGVLEDEMYVGFTAATGQLVESHKILAWSFSNTKFSLSEELITSGLPSFVLPKDSIFKSKGFIAGVTVGGLFIIVAVVLCSLFLIKRKQRRAREREEMEDWELEYWPHRITYQEIEAATKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLEGKIEAGIENETEDMDAYLLQQVKSKDMWANYSRSFGYGYATHPTFHDIRQSNSYSMSLSWSNTIMEGR
Secondary Structure (PSIPRED)
cccccHHHHHHHHHHHHHHccccccEEEEEccccccccEEEEEEEEEcccEEEcccccccEEEEEcccccccccccccccccEEEEEEEEEEEcccccccccEEEEEccccccccccccccEEcccccccccccccEEEEEEEcccccccccccccEEEEEEcccccccccccccccccccccccccccccccccccccccEEccccccEEEEEEEcccEEEEEEEEcccccccccEEEEEccccccccccEEEcEEcccccccccEEEEEEEEcccccccccccccccccccccccccccccccEEEEEEHHHHHHHHHHHHHHHEEEEEHHHHHHHHHccccccccccccEEcHHHHHHHHccccccccccccccEEEEEEEEcccccEEEEEEcccccccHHHHHHHHHHHHcccccccccccccEEcccccEEEEEEEEccccccccccccccccccccHHHHHHHHHHHHHHHHHcccccEEEEEEccccccccEEccccccccccccccEEEccccccEEcEEEccccccccccccccccccccccHHHHHHHHHHHccccccccccccHHHHHHHHHccccccccccccccccccccHHHHHHHHHHHHccccccccccccHHHHHHHHcccccccccccccccHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccHHHHHHHHHHHHHHHHHHHccccccEEEcccccccEEEEEccEEEccEEEcccccccccccEccccccEEcccccccEEEEEEEEEEEEEcccccccccEEEEEEEcccccccccHHHHcEEEEccccccHHcccEEEEEEccccHHHccccccEEEEEEccccccEccccccEccccccccccccccccccccccEEEEEEEccccEEEEEEccccEEEEEEcccccccccccEEEEEEccHHHHcccEEEEEEcccccEccEEEEEEEEEcccccccccccccccccccccccccccccHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHccccccccEccccccEEEEcEccccccEEEEEEEccccHccHHHHHHHHHHHHHcccHcHHHHHHHHHccccEEEEEEEccccccHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHcEcEEcccccHHHEEEcccccEEEccHHHcEEccccccccccEEEEcHHcccHHHHHccccccccHHHHHHHHHHHHHccccccccccccHHHHHHHHHHcccHHHHccHHHHccccccHHHHHHHHHHccccccccccccccHHHHHHHHcccccccccccccccHHHHHHHHccccccccccccccccccccccccccccccccccccccccHHcccc
Coil and Loop (DISEMBL)
MKNHPKPLLFSLLLSIFlsfesisavdfvfngfnssnlslygtATVESRILtltnsttftigralypskiptkrpnssyvypfstsfifamapykgvlaghGLVFLfvpfhgikgateAQHLGlfnrtndgnssnhvfgvefdvfknqefndidenhvgidvnsltsvsahaagywpdnqtdssgsnsnsgtgddekSFKELklnngknyQVWIDYADSFINITMVEagmkrpkrpllsvplnlsgvledemyVGFTAATGQLVESHKILAWsfsntkfslseelitsglpsfvlpkdsifkskgfiagVTVGGLFIIVAVVLCSLFLIKRKQRRAREREEMEDWEleywphritYQEIEAatkgfseenvigvggngkVYKGVLEGGGAEIAVKRishendggtRAFLAEISSLgrlkhkslvglrgwckrekgSLMLVYDYMEngsldkwifqcdgsmmlSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLldkemngrlgdfglarmhghgqvasTTRVVGtvgylapevfssgrastqtdvFGFGILILEVlsgrrpieegkpNLVEMVWELMVQGKLLDALDARLRakggfdedEVERVLHLGLlcaypdprarptMRQVVKVLEGKIEAGIENETEDMDAYLLQQVKSkdmwanysrsfgygyathptfhdirqsnsysmslSWSNTIMEGR
Flexible Loop (DISEMBL)
MKNHPKPLLFSLLLSIFLSFESISAVDFVFNGFNSSNLSLYGTATVESRILTltnsttftigralypskiptkrpnSSYVYPFSTSFIFAMAPYKGVLAGHGLVFLFVPFHGIKGATEAQHLGLFNRTNDGNSSNHVFGVEFDVFKNQEFNDIDENHVGIDVNSLTSVSAHAAGywpdnqtdssgsnsnsgtgDDEKSFKELKLNNGKNYQVWIDYADSFINITMVEAgmkrpkrplLSVPLNLSGVLEDEMYVGFTAATGQLVESHKILAWSFSNTKFSLSEELITSGLPSFVLPKDSIFKSKGFIAGVTVGGLFIIVAVVLCSLFLIKRkqrrarereemedweleywphRITYQEIEAATKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRishendggTRAFLAEisslgrlkhkslvglrgwckreKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLhegwekkvlhrdIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVfssgrastqtdVFGFGILILEvlsgrrpieeGKPNLVEMVWELMVQGKLLDALDARLRAKGGFDEDEVERVLHLGLlcaypdprarptMRQVVKVLEGKIeagieneteDMDAYLLQQVKSKDMWANYSRSFGYGYATHPTfhdirqsnsysmslswsntimegr
Low Complexity Region (SEG)
MKNHPKPllfslllsiflsfesisAVDFVFNGFNSSNLSLYGTATVESRILTLTNSTTFTIGRALYPSKIPTKRPNSSYVYPFSTSFIFAMAPYKGVLAGHGLVFLFVPFHGIKGATEAQHLGLFNRTNDGNSSNHVFGVEFDVFKNQEFNDIDENHVGIDVNSLTSVSAHAAGYWPDNQtdssgsnsnsgtgddEKSFKELKLNNGKNYQVWIDYADSFINITMVEAGMKRPKRPLLSVPLNLSGVLEDEMYVGFTAATGQLVESHKILAWSFSNTKFSLSEELITSGLPSFVLPKDSIFKSKGFIAGVTVGGLFIIVAVVLCSLFLIKrkqrrarereemedweleYWPHRITYQEIEAATKGFSEEnvigvggngkvykgvLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKlldaldarlraKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLEGKIEAGIENETEDMDAYLLQQVKSKDMWANYSRSFGYGYATHPTFHDIRQsnsysmslswsNTIMEGR
Disordered region (IsUnstruct)
*******LLFSLLLSIFLSFESISAVDFVFNGFNSSNLSLYGTATVESRILTLTNSTTFTIGRALYPSKIPTKRPNSSYVYPFSTSFIFAMAPYKGVLAGHGLVFLFVPFHGIKGATEAQHLGLFNRTNDGNSSNHVFGVEFDVFKNQEFNDIDENHVGIDVNSLTSVSAHAAGYW***************************LNNGKNYQVWIDYADSFINITMVEAGMKRPKRPLLSVPLNLSGVLEDEMYVGFTAATGQLVESHKILAWSFSNTKFSLSEELITSGLPSFVLPKDSIFKSKGFIAGVTVGGLFIIVAVVLCSLFLIKRK*********MEDWELEYWPHRITYQEIEAATKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLEGKIEAGIENETEDMDAYLLQQVKSKDMWANYSRSFGYGYATHPTFHDIR*******************
Disordered Region (DISOPRED)
****PKP*LFSLLLSIFLSFESISAVDFVFNGFNSSNLSLYGTATVESRILTLTNSTTFTIGRALYPSKIPTKRPNSSYVYPFSTSFIFAMAPYKGVLAGHGLVFLFVPFHGIK*A*EAQHLGLFNRTNDGNSSNHVFGVEFDVFKNQEFNDIDENHVGIDVNSLTSVSAHAAGYWPDNQTDSSGSNSNSGTGDDEKSFKELKLNNGKNYQVWIDYADSFINITMVEAGMKRPKRPLLSVPLNLSGVLEDEMYVGFTAATGQLVESHKILAWSFSNTKFSLSEELITSGLPSFVLPKDSIFKSKGFIAGVTVGGLFIIVAVVLCSLFLIKRKQRR*********WELEYWPHRITYQEIEAATKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHE****TRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLEGKIEAGIENET*********************************************************
Disordered Region (DISEMBL)
MKNHPKPLLFSLLLSIFLSFESISAVDFVFNGFNSSNLSLYGTATVESRILTLTNSTTFTIGRALYPSKIPTKRPNSSYVYPFSTSFIFAMAPYKGVLAGHGLVFLFVPFHGIKGATEAQHLGLFNRTNDGNSSNHVFGVEFDVFKNQEFNDIDENHVGIDVNSLTSVSAHAAGYWPDN******************SFKELKLNNGKNYQVWIDYADSFINITMVEAGMKRPKRPLLSVPLNLSGVLEDEMYVGFTAATGQLVESHKILAWSFSNTKFSLSEELITSGLPSFVLPKDSIFKSKGFIAGVTVGGLFIIVAVVLCSLFLIKRK**********EDWELEYWPHRITYQEIEAATKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLEGKIEAGIENETEDMDAYLLQQVKSKDMWANYSRSFGYGYATHPTFHDIRQSNSYSMSLSWSNTIMEGR
Disordered Region (DISPRO)
*KNHPKPLLFSLLLSIFLSFESISAVDFVFNGFNSSNLSLYGTATVESRILTLTNSTTFTIGRALYPSKIPTKRPNSSYVYPFSTSFIFAMAPYKGVLAGHGLVFLFVPFHGIKGATEAQHLGLFNRTNDGNSSNHVFGVEFDVFKNQEFNDIDENHVGIDVNSLTSVSAHA***WP******************EKSFKELKLNNGKNYQVWIDYADSFINITMVEAGMKRPKRPLLSVPLNLSGVLEDEMYVGFTAATGQLVESHKILAWSFSNTKFSLSEELITSGLPSFVLPKDSIFKSKGFIAGVTVGGLFIIVAVVLCSLFLIKRKQRRAREREEMEDWELEYWPHRITYQEIEAATKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLEGKIEAGIENETEDMDAYLLQQVKSKDMWANYSRSFGYGY*****************************
Transmembrane Helix (TMHMM)
iiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSiiiHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
SSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MKNHPKPLLFSLLLSIFLSFESISAVDFVFNGFNSSNLSLYGTATVESRILTLTNSTTFTIGRALYPSKIPTKRPNSSYVYPFSTSFIFAMAPYKGVLAGHGLVFLFVPFHGIKGATEAQHLGLFNRTNDGNSSNHVFGVEFDVFKNQEFNDIDENHVGIDVNSLTSVSAHAAGYWPDNQTDSSGSNSNSGTGDDEKSFKELKLNNGKNYQVWIDYADSFINITMVEAGMKRPKRPLLSVPLNLSGVLEDEMYVGFTAATGQLVESHKILAWSFSNTKFSLSEELITSGLPSFVLPKDSIFKSKGFIAGVTVGGLFIIVAVVLCSLFxxxxxxxxxxxxxxxxxxxxxYWPHRITYQEIEAATKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLEGKIEAGIENETEDMDAYLLQQVKSKDMWANYSRSFGYGYATHPTFHDIRQSNSYSMSLSWSNTIMEGR
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	705	2.2.26 [Sep-21-2011]
Q9S9U1	686	L-type lectin-domain cont	yes	no	0.940	0.966	0.622	0.0
O49445	681	Probable L-type lectin-do	no	no	0.924	0.957	0.541	0.0
O81292	674	L-type lectin-domain cont	no	no	0.836	0.875	0.429	1e-140
Q9M345	677	L-type lectin-domain cont	no	no	0.829	0.864	0.424	1e-140
Q9M2S4	684	L-type lectin-domain cont	no	no	0.831	0.856	0.445	1e-139
O80939	675	L-type lectin-domain cont	no	no	0.834	0.871	0.445	1e-137
Q9SZD5	669	L-type lectin-domain cont	no	no	0.826	0.871	0.425	1e-136
O81291	669	L-type lectin-domain cont	no	no	0.853	0.899	0.418	1e-135
Q96285	661	L-type lectin-domain cont	no	no	0.836	0.892	0.398	1e-126
Q9M9E0	656	L-type lectin-domain cont	no	no	0.838	0.900	0.439	1e-126

>sp|Q9S9U1|LRK71_ARATH L-type lectin-domain containing receptor kinase VII.1 OS=Arabidopsis thaliana GN=LECRK71 PE=2 SV=1

 Score =  831 bits (2146), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 429/689 (62%), Positives = 522/689 (75%), Gaps = 26/689 (3%)

Query: 23  ISAVDFVFNGFN--SSNLSLYGTATVESRILTLTNSTTFTIGRALYPSKIPTKRPNSSYV 80
           ISA+DF+FNGFN  SSN+SL+G AT+ES+ILTLTN T+F  GRALY   I TK P +S V
Sbjct: 18  ISAIDFIFNGFNDSSSNVSLFGIATIESKILTLTNQTSFATGRALYNRTIRTKDPITSSV 77

Query: 81  YPFSTSFIFAMAPYKGVLAGHGLVFLFVPFHGIKGATEAQHLGLFNRTNDGNSSNHVFGV 140
            PFSTSFIF MAPYK  L GHG+VFLF P  GI G++ AQHLGLFN TN+GN SNH+FGV
Sbjct: 78  LPFSTSFIFTMAPYKNTLPGHGIVFLFAPSTGINGSSSAQHLGLFNLTNNGNPSNHIFGV 137

Query: 141 EFDVFKNQEFNDIDENHVGIDVNSLTSVSAHAAGYWPDNQTDSSGSNSNSGTGDDEKSFK 200
           EFDVF NQEF+DID NHVGIDVNSL SV ++ +GYW                 DD   FK
Sbjct: 138 EFDVFANQEFSDIDANHVGIDVNSLHSVYSNTSGYW----------------SDDGVVFK 181

Query: 201 ELKLNNGKNYQVWIDYADSFINITMVEAGMKRPKRPLLSVPLNLSGVLEDEMYVGFTAAT 260
            LKLN+G+NYQVWIDY D  +N+TM  AG  RPK PLLS  LNLS V+EDEM+VGFTAAT
Sbjct: 182 PLKLNDGRNYQVWIDYRDFVVNVTMQVAGKIRPKIPLLSTSLNLSDVVEDEMFVGFTAAT 241

Query: 261 GQLVESHKILAWSFSNTKFSLSEELITSGLPSFVLPKDSIFKSKGFIAGVTVGGLFIIVA 320
           G+LV+SHKILAWSFSN+ FSLS  LIT+GLPSFVLPKDSI K+K F+  + +    ++  
Sbjct: 242 GRLVQSHKILAWSFSNSNFSLSNSLITTGLPSFVLPKDSIVKAKWFVFVLVLICFLVVAL 301

Query: 321 VVLCSLFLIKRKQRRAREREEMEDWELEYWPHRITYQEIEAATKGFSEENVIGVGGNGKV 380
           V L    +++++  RAR+R  MEDWE+EYWPHRI Y+EIE+ TKGF E+NVIG+GGNGKV
Sbjct: 302 VGLVLFAVVRKRLERARKRALMEDWEMEYWPHRIPYEEIESGTKGFDEKNVIGIGGNGKV 361

Query: 381 YKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLV 440
           YKG+L+GG  E+AVKRIS E+  G R F+AEISSLGRLKH++LV LRGWCK+E GS MLV
Sbjct: 362 YKGLLQGGVVEVAVKRISQESSDGMREFVAEISSLGRLKHRNLVSLRGWCKKEVGSFMLV 421

Query: 441 YDYMENGSLDKWIFQCDGSM-MLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNV 499
           YDYMENGSLD+WIF+ D  +  LSCEERIR+LK VA+G+LYLHEGWE KVLHRDIK+SNV
Sbjct: 422 YDYMENGSLDRWIFENDEKITTLSCEERIRILKGVASGILYLHEGWESKVLHRDIKASNV 481

Query: 500 LLDKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILI 559
           LLD++M  RL DFGLAR+HGH Q   TTRVVGT GYLAPEV  +GRASTQTDVF +GIL+
Sbjct: 482 LLDRDMIPRLSDFGLARVHGHEQPVRTTRVVGTAGYLAPEVVKTGRASTQTDVFAYGILV 541

Query: 560 LEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRAKGGFDE--DEVERVLHLGLL 617
           LEV+ GRRPIEEGK  L++ VW LM +G++L+ LD ++    G  E  DE ERVL LGLL
Sbjct: 542 LEVMCGRRPIEEGKKPLMDWVWGLMERGEILNGLDPQMMMTQGVTEVIDEAERVLQLGLL 601

Query: 618 CAYPDPRARPTMRQVVKVLEGKIEAGIENE-TEDMDAYLLQQVKSKDMWANYSRSFGYGY 676
           CA+PDP  RP+MRQVV+V EG      E E +ED+++++L ++ S+      SR F YG 
Sbjct: 602 CAHPDPAKRPSMRQVVQVFEGDKAEIFEAESSEDVESWMLMKMGSR----GSSREFWYGS 657

Query: 677 ATHPTFHDIRQSNSYSMSLSWSNTIMEGR 705
           ++HPT   IR  +      SW+++I+EGR
Sbjct: 658 SSHPTIEQIRLQSLSVSLSSWNSSILEGR 686

Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 7EC: .EC: 1EC: 1EC: .EC: 1

>sp|O49445|LRK72_ARATH Probable L-type lectin-domain containing receptor kinase VII.2 OS=Arabidopsis thaliana GN=LECRK72 PE=1 SV=2

 Score =  717 bits (1850), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 376/694 (54%), Positives = 504/694 (72%), Gaps = 42/694 (6%)

Query: 22  SISAVDFVFNG-FNSSNLSLYGTATVES--RILTLTNSTTFTIGRALYPSKIPTKRPNSS 78
           S + ++F++N  F ++N  L G ATV+S   ILTLTN TTF+IGR LYPS+I     ++S
Sbjct: 20  STTGIEFIYNSNFTTTNTLLLGNATVKSPPSILTLTNQTTFSIGRGLYPSRINASSSSAS 79

Query: 79  YVYPFSTSFIFAMAPYKGVLAGHGLVFLFVPFHGIKGATEAQHLGLFNRTNDGNSSNHVF 138
            + PF+TSFIF+MAP+K +  GHG  F+F+PF     A+ +QHLGLFN TN+G+ ++ +F
Sbjct: 80  PL-PFATSFIFSMAPFKHLSPGHGFAFVFLPFSETSAASSSQHLGLFNFTNNGDPNSRIF 138

Query: 139 GVEFDVFKNQEFNDIDENHVGIDVNSLTSVSAHAAGYWPDNQTDSSGSNSNSGTGDDEKS 198
            VEFDVF NQEFNDI++NHVG+DVNSLTSV++  AG++                G D + 
Sbjct: 139 AVEFDVFANQEFNDINDNHVGVDVNSLTSVASETAGFY---------------GGRDGQR 183

Query: 199 FKELKLNNGKNYQVWIDYADSFINITMVEAGMKRPKRPLLSVPLNLSGVLEDEMYVGFTA 258
           F ELKLN+G+NYQ WI++  S IN+TM  A  ++P RPL+S+PLNL+GVL D+M+VGFTA
Sbjct: 184 FTELKLNSGENYQAWIEFNGSAINVTMARASSRKPIRPLISIPLNLTGVLLDDMFVGFTA 243

Query: 259 ATGQLVESHKILAWSFSNTKFSLSEELITSGLPSFVLPKDSIFKSKGFIAGVTVGGLFII 318
           +TGQLV+SH+IL+WSFSN+ FS+ + LIT  LPSF L  DS+ KSKGFIAGV+ G + ++
Sbjct: 244 STGQLVQSHRILSWSFSNSNFSIGDALITRNLPSFKLSGDSVLKSKGFIAGVSSGVVLLV 303

Query: 319 VAVVLCSLFLIKRKQRRAREREEMEDWELEYWPHRITYQEIEAATKGFSEENVIGVGGNG 378
             + L   ++++R  RR R   ++EDWE EYWPHR+ Y+++  ATKGFS+EN+IG GGN 
Sbjct: 304 SVIGLLCFYVVRR--RRQRLEGDVEDWETEYWPHRVQYKDVLEATKGFSDENMIGYGGNS 361

Query: 379 KVYKGVLEGGGAEIAVKRI---SHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKG 435
           KVY+GVLE  G E+AVKRI     E+ G T  FLAE+SSLGRL+HK++VGL+GW K+   
Sbjct: 362 KVYRGVLE--GKEVAVKRIMMSPRESVGATSEFLAEVSSLGRLRHKNIVGLKGWSKKGGE 419

Query: 436 SLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIK 495
           SL+L+Y+YMENGS+DK IF C+   ML+ EER+RV++D+A+G+LYLHEGWE KVLHRDIK
Sbjct: 420 SLILIYEYMENGSVDKRIFDCN--EMLNWEERMRVIRDLASGMLYLHEGWETKVLHRDIK 477

Query: 496 SSNVLLDKEMNGRLGDFGLARMHGHG-QVASTTRVVGTVGYLAPEVFSSGRASTQTDVFG 554
           SSNVLLDK+MN R+GDFGLA++     ++ STT VVGT GY+APE+  +GRAS QTDV+ 
Sbjct: 478 SSNVLLDKDMNARVGDFGLAKLQNTSKEMVSTTHVVGTAGYMAPELVKTGRASAQTDVYS 537

Query: 555 FGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRAKGGFDEDEVERVLHL 614
           FG+ +LEV+ GRRPIEEG+  +VE +W LM + K++D LD R++A G F  +EVE  L +
Sbjct: 538 FGVFVLEVVCGRRPIEEGREGIVEWIWGLMEKDKVVDGLDERIKANGVFVVEEVEMALRI 597

Query: 615 GLLCAYPDPRARPTMRQVVKVLE-GK-IEAGIENETEDMDAYLLQQVKSKDMWANYSRSF 672
           GLLC +PDPR RP MRQVV++LE G+ +E G E E       LL++VKS     +Y    
Sbjct: 598 GLLCVHPDPRVRPKMRQVVQILEQGRLVEDGGEREIS-----LLERVKS-----SYLLET 647

Query: 673 GYG-YATHPTFHDIRQSNSYSMSLSWSNTIMEGR 705
           G G    HPTF D+  S+SYS S    ++I+ GR
Sbjct: 648 GEGSRQQHPTFQDVWNSSSYSNSFQTYDSILHGR 681

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|O81292|LRK43_ARATH L-type lectin-domain containing receptor kinase IV.3 OS=Arabidopsis thaliana GN=LECRK43 PE=2 SV=1

 Score =  499 bits (1286), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 272/633 (42%), Positives = 399/633 (63%), Gaps = 43/633 (6%)

Query: 22  SISAVDFVFNGFN--SSNLSLYGTATVESR-ILTLTNSTTFTIGRALYPSKIPTKRPNSS 78
           S  +++F +N F+   +N+S+ G ATV S  IL LT+ T  + G A Y   I  K   + 
Sbjct: 23  SSQSLNFTYNSFHRPPTNISIQGIATVTSNGILKLTDKTVISTGHAFYTEPIRFKDSPND 82

Query: 79  YVYPFSTSFIFAMAPYKGV--LAGHGLVFLFVPFHGIKGATEAQHLGLFNRTNDGNSSNH 136
            V  FST+F+  +  Y G+  ++GHG+ F   P   +  A  +Q+LGLF+ TN+GN +NH
Sbjct: 83  TVSSFSTTFVIGI--YSGIPTISGHGMAFFIAPNPVLSSAMASQYLGLFSSTNNGNDTNH 140

Query: 137 VFGVEFDVFKNQEFNDIDENHVGIDVNSLTSVSAHAAGYWPDNQTDSSGSNSNSGTGDDE 196
           +  VEFD   N EF+D ++NHVGI++NSLTSV +   GYW                 D+ 
Sbjct: 141 ILAVEFDTIMNPEFDDTNDNHVGININSLTSVKSSLVGYW-----------------DEI 183

Query: 197 KSFKELKLNNGKNYQVWIDYAD--SFINITMVEAGMKRPKRPLLSVPLNLSGVLEDEMYV 254
             F  L L + K  QVW+DY D  + I++TM   G  +P++ L+SV  +LS V   +MY+
Sbjct: 184 NQFNNLTLISRKRMQVWVDYDDRTNQIDVTMAPFGEVKPRKALVSVVRDLSSVFLQDMYL 243

Query: 255 GFTAATGQLVESHKILAWSFSNTKFSLSEELITSGLPSF--VLPK--DSIFKSKGFIAGV 310
           GF+AATG ++  H +  WSF   K   +  L  S +P F  V P      +K++  +  +
Sbjct: 244 GFSAATGYVLSEHFVFGWSFM-VKGKTAPPLTLSKVPKFPRVGPTSLQRFYKNRMPLFSL 302

Query: 311 TVGGLFIIVAVVLCSLFLIKRKQRRAREREEMEDWELEYWPHRITYQEIEAATKGFSEEN 370
            +  +  +V+++    F+++R+++ A   EE EDWE E+  +R+ ++++  ATKGF +++
Sbjct: 303 LLIPVLFVVSLIFLVRFIVRRRRKFA---EEFEDWETEFGKNRLRFKDLYYATKGFKDKD 359

Query: 371 VIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWC 430
           ++G GG G+VY+GV+     EIAVKR+S+E+  G + F+AEI S+GR+ H++LV L G+C
Sbjct: 360 LLGSGGFGRVYRGVMPTTKKEIAVKRVSNESRQGLKEFVAEIVSIGRMSHRNLVPLLGYC 419

Query: 431 KREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVL 490
           +R +  L+LVYDYM NGSLDK+++ C   + L  ++R  V+  VA+G+ YLHE WE+ V+
Sbjct: 420 RR-RDELLLVYDYMPNGSLDKYLYDCP-EVTLDWKQRFNVIIGVASGLFYLHEEWEQVVI 477

Query: 491 HRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQT 550
           HRDIK+SNVLLD E NGRLGDFGLAR+  HG    TTRVVGT GYLAP+   +GRA+T T
Sbjct: 478 HRDIKASNVLLDAEYNGRLGDFGLARLCDHGSDPQTTRVVGTWGYLAPDHVRTGRATTAT 537

Query: 551 DVFGFGILILEVLSGRRPIE-----EGKPNLVEMVWELMVQGKLLDALDARLRAKGGFDE 605
           DVF FG+L+LEV  GRRPIE     +    LV+ V+   ++G +LDA D  L +   +D+
Sbjct: 538 DVFAFGVLLLEVACGRRPIEIEIESDESVLLVDSVFGFWIEGNILDATDPNLGSV--YDQ 595

Query: 606 DEVERVLHLGLLCAYPDPRARPTMRQVVKVLEG 638
            EVE VL LGLLC++ DP+ RPTMRQV++ L G
Sbjct: 596 REVETVLKLGLLCSHSDPQVRPTMRQVLQYLRG 628

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9M345|LRK42_ARATH L-type lectin-domain containing receptor kinase IV.2 OS=Arabidopsis thaliana GN=LECRK42 PE=2 SV=1

 Score =  498 bits (1282), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 267/629 (42%), Positives = 402/629 (63%), Gaps = 44/629 (6%)

Query: 26  VDFVFNGFNS--SNLSLYGTATVESR-ILTLTNSTTFTIGRALYPSKIPTKRPNSSYVYP 82
           ++F +NGF+   +++SL G ATV    +L LTN++    G A    +I  K   +  V  
Sbjct: 25  LNFTYNGFHPPLTDISLQGLATVTPNGLLKLTNTSVQKTGHAFCTERIRFKDSQNGNVSS 84

Query: 83  FSTSFIFAMAPYKGVLAGHGLVFLFVPFHGIKGATEAQHLGLFNRTNDGNSSNHVFGVEF 142
           FST+F+FA+      L+GHG+ F+  P  G+  A  +Q++GLFN +N+GN +NH+F VEF
Sbjct: 85  FSTTFVFAIHSQIPTLSGHGIAFVVAPTLGLPFALPSQYIGLFNISNNGNDTNHIFAVEF 144

Query: 143 DVFKNQEFNDIDENHVGIDVNSLTSVSAHAAGYWPDNQTDSSGSNSNSGTGDDEKSFKEL 202
           D  ++ EF D ++NHVGID+N L S +   AGY                  DD   F+ L
Sbjct: 145 DTIQSSEFGDPNDNHVGIDLNGLRSANYSTAGYR-----------------DDHDKFQNL 187

Query: 203 KLNNGKNYQVWIDYADSF--INITMVEAGMKRPKRPLLSVPLNLSGVLEDEMYVGFTAAT 260
            L + K  QVWIDY +    I++T+      +P++PL+S   +LS +L ++MYVGF++AT
Sbjct: 188 SLISRKRIQVWIDYDNRSHRIDVTVAPFDSDKPRKPLVSYVRDLSSILLEDMYVGFSSAT 247

Query: 261 GQLVESHKILAWSF----SNTKFSLSEELITSGLPSFVLPKDSIFKSKGFIAGVTVGGLF 316
           G ++  H ++ WSF         SLS+      LP F   + S F    +  G+ +  L 
Sbjct: 248 GSVLSEHFLVGWSFRLNGEAPMLSLSK---LPKLPRFEPRRISEF----YKIGMPLISLS 300

Query: 317 IIVAVVLCSLFLIKRKQRRAREREEMEDWELEYWPHRITYQEIEAATKGFSEENVIGVGG 376
           +I +++  + ++++RK++     EE++DWE E+  +R  ++E+  ATKGF E++++G GG
Sbjct: 301 LIFSIIFLAFYIVRRKKKY---EEELDDWETEFGKNRFRFKELYHATKGFKEKDLLGSGG 357

Query: 377 NGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGS 436
            G+VY+G+L     E+AVKR+SH++  G + F+AEI S+GR+ H++LV L G+C+R +G 
Sbjct: 358 FGRVYRGILPTTKLEVAVKRVSHDSKQGMKEFVAEIVSIGRMSHRNLVPLLGYCRR-RGE 416

Query: 437 LMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKS 496
           L+LVYDYM NGSLDK+++  +    L  ++R  ++K VA+G+ YLHE WE+ V+HRD+K+
Sbjct: 417 LLLVYDYMPNGSLDKYLYN-NPETTLDWKQRSTIIKGVASGLFYLHEEWEQVVIHRDVKA 475

Query: 497 SNVLLDKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFG 556
           SNVLLD + NGRLGDFGLAR++ HG    TT VVGT+GYLAPE   +GRA+T TDV+ FG
Sbjct: 476 SNVLLDADFNGRLGDFGLARLYDHGSDPQTTHVVGTLGYLAPEHSRTGRATTTTDVYAFG 535

Query: 557 ILILEVLSGRRPIEEGKPN-----LVEMVWELMVQGKLLDALDARLRAKGGFDEDEVERV 611
             +LEV+SGRRPIE    +     LVE V+ L ++G +++A D +L    G+D +EVE V
Sbjct: 536 AFLLEVVSGRRPIEFHSASDDTFLLVEWVFSLWLRGNIMEAKDPKL-GSSGYDLEEVEMV 594

Query: 612 LHLGLLCAYPDPRARPTMRQVVKVLEGKI 640
           L LGLLC++ DPRARP+MRQV++ L G +
Sbjct: 595 LKLGLLCSHSDPRARPSMRQVLQYLRGDM 623

Required during pollen development.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9M2S4|LRKS4_ARATH L-type lectin-domain containing receptor kinase S.4 OS=Arabidopsis thaliana GN=LECRKS4 PE=1 SV=1

 Score =  495 bits (1275), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 280/629 (44%), Positives = 388/629 (61%), Gaps = 43/629 (6%)

Query: 27  DFVFNGFN--SSNLSLYGTATV-ESRILTLTNSTTFTIGRALYPSKIPTKRPNSSYVYPF 83
           DF F GF   S NL+L G A +  +  + LT  T   IG A Y   I  K    +    F
Sbjct: 25  DFSFIGFKKASPNLTLNGVAEIAPTGAIRLTTETQRVIGHAFYSLPIRFKPIGVNRALSF 84

Query: 84  STSFIFAMAPYKGVLAGHGLVFLFVPFHGIKGATEAQHLGLFNRTNDGNSSNHVFGVEFD 143
           STSF  AM P    L GHGL F   P   ++G+  +Q+LGL N ++  N S+H F VEFD
Sbjct: 85  STSFAIAMVPEFVTLGGHGLAFAITPTPDLRGSLPSQYLGLLN-SSRVNFSSHFFAVEFD 143

Query: 144 VFKNQEFNDIDENHVGIDVNSLTSVSAHAAGYWPDNQTDSSGSNSNSGTGDDEKSFKELK 203
             ++ EF DI++NHVGID+NS+ S  +  AGY+  N T                  KEL 
Sbjct: 144 TVRDLEFEDINDNHVGIDINSMESSISTPAGYFLANSTK-----------------KELF 186

Query: 204 LNNGKNYQVWIDYADSFINITM-VEAGMKRPKRPLLSVPLNLSGVLEDEMYVGFTAATGQ 262
           L+ G+  Q WIDY  +   + + +    ++PK  LLS  ++LS VL DEMYVGF+A+TG 
Sbjct: 187 LDGGRVIQAWIDYDSNKKRLDVKLSPFSEKPKLSLLSYDVDLSSVLGDEMYVGFSASTGL 246

Query: 263 LVESHKILAWSFSNTKFSLSEELITSGLPSFVLPKDSIFKS----KGFIAGVTV-GGLFI 317
           L  SH IL W+F+     +S E  +  LPS      SI K     +  I GV++   L I
Sbjct: 247 LASSHYILGWNFN-----MSGEAFSLSLPSLPRIPSSIKKRKKKRQSLILGVSLLCSLLI 301

Query: 318 IVAVVLCSLFLIKRKQRRAREREEMEDWELEYWPHRITYQEIEAATKGFSEENVIGVGGN 377
              +V  SLF++    R+ ++ + +E+WEL++ PHR +Y+E++ AT GF ++ ++G GG 
Sbjct: 302 FAVLVAASLFVV----RKVKDEDRVEEWELDFGPHRFSYRELKKATNGFGDKELLGSGGF 357

Query: 378 GKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSL 437
           GKVYKG L G    +AVKRISHE+  G R F++E+SS+G L+H++LV L GWC+R +  L
Sbjct: 358 GKVYKGKLPGSDEFVAVKRISHESRQGVREFMSEVSSIGHLRHRNLVQLLGWCRR-RDDL 416

Query: 438 MLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSS 497
           +LVYD+M NGSLD ++F  +  ++L+ ++R +++K VA+G+LYLHEGWE+ V+HRDIK++
Sbjct: 417 LLVYDFMPNGSLDMYLFDENPEVILTWKQRFKIIKGVASGLLYLHEGWEQTVIHRDIKAA 476

Query: 498 NVLLDKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGI 557
           NVLLD EMNGR+GDFGLA+++ HG     TRVVGT GYLAPE+  SG+ +T TDV+ FG 
Sbjct: 477 NVLLDSEMNGRVGDFGLAKLYEHGSDPGATRVVGTFGYLAPELTKSGKLTTSTDVYAFGA 536

Query: 558 LILEVLSGRRPIEEGK-PN---LVEMVWELMVQGKLLDALDARLRAKGGFDEDEVERVLH 613
           ++LEV  GRRPIE    P    +V+ VW     G + D +D RL   G FDE+EV  V+ 
Sbjct: 537 VLLEVACGRRPIETSALPEELVMVDWVWSRWQSGDIRDVVDRRL--NGEFDEEEVVMVIK 594

Query: 614 LGLLCAYPDPRARPTMRQVVKVLEGKIEA 642
           LGLLC+   P  RPTMRQVV  LE +  +
Sbjct: 595 LGLLCSNNSPEVRPTMRQVVMYLEKQFPS 623

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|O80939|LRK41_ARATH L-type lectin-domain containing receptor kinase IV.1 OS=Arabidopsis thaliana GN=LECRK41 PE=1 SV=1

 Score =  488 bits (1255), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 280/629 (44%), Positives = 396/629 (62%), Gaps = 41/629 (6%)

Query: 22  SISAVDFVFN-GFNS-SNLSLYGTATVESR-ILTLTNSTTFTIGRALYPSKIPTKRPNSS 78
           S  +++F +N GFN  ++LS+ G  TV    +L LTN+T    G A Y   I  K   + 
Sbjct: 21  SSQSLNFAYNNGFNPPTDLSIQGITTVTPNGLLKLTNTTVQKTGHAFYTKPIRFKDSPNG 80

Query: 79  YVYPFSTSFIFAMAPYKGVLAGHGLVFLFVPFHGIKGATEAQHLGLFNRTNDGNSSNHVF 138
            V  FSTSF+FA+     +L+GHG+ F+  P   +     +Q++GLFN  N+GN +NHVF
Sbjct: 81  TVSSFSTSFVFAIHSQIAILSGHGIAFVVAPNASLPYGNPSQYIGLFNLANNGNETNHVF 140

Query: 139 GVEFDVFKNQEFNDIDENHVGIDVNSLTSVSAHAAGYWPDNQTDSSGSNSNSGTGDDEKS 198
            VE D   + EFND ++NHVGID+NSL SV +  AGYW                 D++  
Sbjct: 141 AVELDTILSTEFNDTNDNHVGIDINSLKSVQSSPAGYW-----------------DEKGQ 183

Query: 199 FKELKLNNGKNYQVWIDY--ADSFINITMVEAGMKRPKRPLLSVPLNLSGVLEDEMYVGF 256
           FK L L + K  QVW+DY    + I++TM      +P RPL++   +LS VL  +MYVGF
Sbjct: 184 FKNLTLISRKPMQVWVDYDGRTNKIDVTMAPFNEDKPTRPLVTAVRDLSSVLLQDMYVGF 243

Query: 257 TAATGQLVESHKILAWSFS-NTKFSLSEELITSGLPSFVLPK-DSIFKSKGFIAGVTVGG 314
           ++ATG ++  H IL WSF  N K   +  L  S LP   LP+ +    S+ +  G+ +  
Sbjct: 244 SSATGSVLSEHYILGWSFGLNEK---APPLALSRLPK--LPRFEPKRISEFYKIGMPLIS 298

Query: 315 LFIIVAVVLCSLFLIKRKQRRAREREEMEDWELEYWPHRITYQEIEAATKGFSEENVIGV 374
           LF+I + +    ++++R+++ A E EE E    E+  +R  ++++  ATKGF E+ ++G 
Sbjct: 299 LFLIFSFIFLVCYIVRRRRKFAEELEEWE---KEFGKNRFRFKDLYYATKGFKEKGLLGT 355

Query: 375 GGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREK 434
           GG G VYKGV+ G   EIAVKR+SHE+  G + F+AEI S+GR+ H++LV L G+C+R +
Sbjct: 356 GGFGSVYKGVMPGTKLEIAVKRVSHESRQGMKEFVAEIVSIGRMSHRNLVPLLGYCRR-R 414

Query: 435 GSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDI 494
           G L+LVYDYM NGSLDK+++     + L+ ++RI+V+  VA+G+ YLHE WE+ V+HRD+
Sbjct: 415 GELLLVYDYMPNGSLDKYLYNTP-EVTLNWKQRIKVILGVASGLFYLHEEWEQVVIHRDV 473

Query: 495 KSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFG 554
           K+SNVLLD E+NGRLGDFGLAR++ HG    TT VVGT+GYLAPE   +GRA+  TDVF 
Sbjct: 474 KASNVLLDGELNGRLGDFGLARLYDHGSDPQTTHVVGTLGYLAPEHTRTGRATMATDVFA 533

Query: 555 FGILILEVLSGRRPIEEGKPN-----LVEMVWELMVQGKLLDALDARLRAKGGFDEDEVE 609
           FG  +LEV  GRRPIE  +       LV+ V+ L  +G +L A D  + ++   DE EVE
Sbjct: 534 FGAFLLEVACGRRPIEFQQETDETFLLVDWVFGLWNKGDILAAKDPNMGSE--CDEKEVE 591

Query: 610 RVLHLGLLCAYPDPRARPTMRQVVKVLEG 638
            VL LGLLC++ DPRARP+MRQV+  L G
Sbjct: 592 MVLKLGLLCSHSDPRARPSMRQVLHYLRG 620

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9SZD5|LRK59_ARATH L-type lectin-domain containing receptor kinase V.9 OS=Arabidopsis thaliana GN=LECRK59 PE=2 SV=1

 Score =  484 bits (1247), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 264/621 (42%), Positives = 381/621 (61%), Gaps = 38/621 (6%)

Query: 27  DFVFNGFNSSNLSLYGTATVESR-ILTLTNSTTFTIGRALYPSKIPTKRPNSSYVYPFST 85
           +F FNG+   N    G A   S+ ++ LTNS+ F+ G   Y S +  K   +  V  FST
Sbjct: 27  EFGFNGYLYDN---SGIAITNSKGLMKLTNSSEFSYGHVFYNSPVRFKNSPNGTVSSFST 83

Query: 86  SFIFAMAPYKGVLAGHGLVFLFVPFHGIKGATEAQHLGLFNRTNDGNSSNHVFGVEFDVF 145
           +F+FA+      L GHGL F+  P  G+  ++ +Q+LGLFN TN+G+ SNH+  VEFD F
Sbjct: 84  TFVFAIVSNVNALDGHGLAFVISPTKGLPYSSSSQYLGLFNLTNNGDPSNHIVAVEFDTF 143

Query: 146 KNQEFNDIDENHVGIDVNSLTSVSAHAAGYWPDNQTDSSGSNSNSGTGDDEKSFKELKLN 205
           +NQEF+D+D NHVGID+NSL+S  A  AGY+                 DD+ +FK ++L 
Sbjct: 144 QNQEFDDMDNNHVGIDINSLSSEKASTAGYYE----------------DDDGTFKNIRLI 187

Query: 206 NGKNYQVWIDYADSF--INITMVEAGMKRPKRPLLSVPLNLSGVLEDEMYVGFTAATGQL 263
           N K  Q WI+Y  S   +N+T+    + +PK PLLS+  +LS  L D MYVGFT+ATG+L
Sbjct: 188 NQKPIQAWIEYDSSRRQLNVTIHPIHLPKPKIPLLSLTKDLSPYLFDSMYVGFTSATGRL 247

Query: 264 VESHKILAWSFSNTKFSLSEELITSGLPSFVLPKDSIFKSKGFIAGVTVG--GLFIIVAV 321
             SH IL W+F       +  +  S LP   LP+DS   S   I  +++    L I+V +
Sbjct: 248 RSSHYILGWTFKLN--GTASNIDISRLPK--LPRDSRSTSVKKILAISLSLTSLAILVFL 303

Query: 322 VLCSLFLIKRKQRRAREREEMEDWELEYWPHRITYQEIEAATKGFSEENVIGVGGNGKVY 381
            +  +  +KRK    +  E +EDWE+++ PHR  Y+++  ATKGF    ++G GG GKVY
Sbjct: 304 TISYMLFLKRK----KLMEVLEDWEVQFGPHRFAYKDLYIATKGFRNSELLGKGGFGKVY 359

Query: 382 KGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVY 441
           KG L     +IAVK++SH++  G R F+AEI+++GRL+H +LV L G+C+R KG L LVY
Sbjct: 360 KGTLSTSNMDIAVKKVSHDSRQGMREFVAEIATIGRLRHPNLVRLLGYCRR-KGELYLVY 418

Query: 442 DYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLL 501
           D M  GSLDK+++       L   +R +++KDVA+G+ YLH  W + ++HRDIK +NVLL
Sbjct: 419 DCMPKGSLDKFLYH-QPEQSLDWSQRFKIIKDVASGLCYLHHQWVQVIIHRDIKPANVLL 477

Query: 502 DKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILE 561
           D  MNG+LGDFGLA++  HG    T+ V GT GY++PE+  +G+AST +DVF FGIL+LE
Sbjct: 478 DDSMNGKLGDFGLAKLCEHGFDPQTSNVAGTFGYISPELSRTGKASTSSDVFAFGILMLE 537

Query: 562 VLSGRRPIEEGKPNLVEMV---WELMV-QGKLLDALDARLRAKGGFDEDEVERVLHLGLL 617
           +  GRRP+     +  EMV   W L   +  +L  +D R++    + E++V  VL LGL 
Sbjct: 538 ITCGRRPVLPRASSPSEMVLTDWVLDCWEDDILQVVDERVKQDDKYLEEQVALVLKLGLF 597

Query: 618 CAYPDPRARPTMRQVVKVLEG 638
           C++P    RP+M  V++ L+G
Sbjct: 598 CSHPVAAVRPSMSSVIQFLDG 618

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|O81291|LRK44_ARATH L-type lectin-domain containing receptor kinase IV.4 OS=Arabidopsis thaliana GN=LECRK44 PE=3 SV=1

 Score =  483 bits (1242), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 273/652 (41%), Positives = 397/652 (60%), Gaps = 50/652 (7%)

Query: 8   LLFSLLLSIF-LSF------ESISAVDFVFNGFNS--SNLSLYGTATVESR-ILTLTNST 57
           + F  L +IF LSF       S   +DF +NGF    +++S+ G AT+    +L LTN+T
Sbjct: 1   MFFIKLFTIFFLSFFWQSLKSSSQIIDFTYNGFRPPPTDISILGIATITPNGLLKLTNTT 60

Query: 58  TFTIGRALYPSKIPTKRPNSSYVYPFSTSFIFAMAPYKGVLAGHGLVFLFVPFHGIKGAT 117
             + G A Y   I  K   +  V  FST+F+FA+  +  +   HG+ F+  P   +   +
Sbjct: 61  MQSTGHAFYTKPIRFKDSPNGTVSSFSTTFVFAI--HSQIPIAHGMAFVIAPNPRLPFGS 118

Query: 118 EAQHLGLFNRTNDGNSSNHVFGVEFDVFKNQEFNDIDENHVGIDVNSLTSVSAHAAGYWP 177
             Q+LGLFN TN+GN  NHVF VE D   N EFND + NHVGID+NSL SV +  AGYW 
Sbjct: 119 PLQYLGLFNVTNNGNVRNHVFAVELDTIMNIEFNDTNNNHVGIDINSLNSVKSSPAGYW- 177

Query: 178 DNQTDSSGSNSNSGTGDDEKSFKELKLNNGKNYQVWIDY--ADSFINITMVEAGMKRPKR 235
                           D+   F  L L + K  QVW+D+      I++TM   G  +P++
Sbjct: 178 ----------------DENDQFHNLTLISSKRMQVWVDFDGPTHLIDVTMAPFGEVKPRK 221

Query: 236 PLLSVPLNLSGVLEDEMYVGFTAATGQLVESHKILAWSF----SNTKFSLSEELITSGLP 291
           PL+S+  +LS VL  +M+VGF++ATG +V    +L WSF         +LS+      LP
Sbjct: 222 PLVSIVRDLSSVLLQDMFVGFSSATGNIVSEIFVLGWSFGVNGEAQPLALSK---LPRLP 278

Query: 292 SFVLPKDSIFKSKGFIAGVTVGGLFIIVAVVLCSLFLIKRKQRRAREREEMEDWELEYWP 351
            + L    +++       +    L   + ++    F++KR+++ A   EE+EDWE E+  
Sbjct: 279 VWDLKPTRVYRFYKNWVPLISLLLIPFLLIIFLVRFIMKRRRKFA---EEVEDWETEFGK 335

Query: 352 HRITYQEIEAATKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAE 411
           +R+ ++++  ATKGF ++N++G GG G VYKG++     EIAVKR+S+E+  G + F+AE
Sbjct: 336 NRLRFKDLYYATKGFKDKNILGSGGFGSVYKGIMPKTKKEIAVKRVSNESRQGLKEFVAE 395

Query: 412 ISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVL 471
           I S+G++ H++LV L G+C+R +  L+LVYDYM NGSLDK+++     + L  ++R +V+
Sbjct: 396 IVSIGQMSHRNLVPLVGYCRR-RDELLLVYDYMPNGSLDKYLYNSP-EVTLDWKQRFKVI 453

Query: 472 KDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRVVG 531
             VA+ + YLHE WE+ V+HRD+K+SNVLLD E+NGRLGDFGLA++  HG    TTRVVG
Sbjct: 454 NGVASALFYLHEEWEQVVIHRDVKASNVLLDAELNGRLGDFGLAQLCDHGSDPQTTRVVG 513

Query: 532 TVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPN-----LVEMVWELMVQ 586
           T GYLAP+   +GRA+T TDVF FG+L+LEV  GRRPIE    +     LV+ V+   ++
Sbjct: 514 TWGYLAPDHIRTGRATTTTDVFAFGVLLLEVACGRRPIEINNQSGERVVLVDWVFRFWME 573

Query: 587 GKLLDALDARLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLEG 638
             +LDA D  L ++  +D+ EVE VL LGLLC++ DP ARPTMRQV++ L G
Sbjct: 574 ANILDAKDPNLGSE--YDQKEVEMVLKLGLLCSHSDPLARPTMRQVLQYLRG 623

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q96285|LRK55_ARATH L-type lectin-domain containing receptor kinase V.5 OS=Arabidopsis thaliana GN=LECRK55 PE=1 SV=1

 Score =  452 bits (1164), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 257/645 (39%), Positives = 389/645 (60%), Gaps = 55/645 (8%)

Query: 6   KPLLFSLLLSIFLS----FESISAVDFVFNGFNSSNLSLYGTATVESRILTLTNSTTFTI 61
           +P+L  L L++F +    F S  +V   FNG+                  TLTN+T  T 
Sbjct: 10  QPILV-LFLTLFYNSHGYFVSQGSVGIGFNGY-----------------FTLTNTTKHTF 51

Query: 62  GRALYPSKIPTKRPNSSYVYPFSTSFIFAMAPYKGVLAGHGLVFLFVPFHGIKGATEAQH 121
           G+A     +  K  ++  +  FS +F FA+ P       HG+ F+  P  G+ GA+  Q+
Sbjct: 52  GQAFENEHVEIKNSSTGVISSFSVNFFFAIVPEHNQQGSHGMTFVISPTRGLPGASSDQY 111

Query: 122 LGLFNRTNDGNSSNHVFGVEFDVFKNQEFNDIDENHVGIDVNSLTSVSAHAAGYWPDNQT 181
           LG+FN+TN+G +SN+V  +E D+ K++EF DID+NHVGI++N L SV++ +AGY+     
Sbjct: 112 LGIFNKTNNGKASNNVIAIELDIHKDEEFGDIDDNHVGININGLRSVASASAGYY----- 166

Query: 182 DSSGSNSNSGTGDDEKSFKELKLNNGKNYQVWIDYA--DSFINITMVEAGMKRPK-RPLL 238
                       D + SFK+L L + +  ++ I Y+  D  +N+T+  A +  P  +PLL
Sbjct: 167 -----------DDKDGSFKKLSLISREVMRLSIVYSQPDQQLNVTLFPAEIPVPPLKPLL 215

Query: 239 SVPLNLSGVLEDEMYVGFTAATGQLVESHKILAWSFSNTKFSLSEELITSGLPSFVLPKD 298
           S+  +LS  L ++MY+GFTA+TG +   H ++ W  +        EL    LP +  PK 
Sbjct: 216 SLNRDLSPYLLEKMYLGFTASTGSVGAIHYLMGWLVNGVIEYPRLELSIPVLPPY--PKK 273

Query: 299 SIFKSKGFIA-GVTVGGLFIIVAVVLCSLFLIKRKQRRAREREEMEDWELEYWPHRITYQ 357
           +  ++K  +A  +TV      VA  +  +F ++ K    + +E +E+WE++Y PHR  Y+
Sbjct: 274 TSNRTKTVLAVCLTVSVFAAFVASWIGFVFYLRHK----KVKEVLEEWEIQYGPHRFAYK 329

Query: 358 EIEAATKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGR 417
           E+  ATKGF E+ ++G GG G+VYKG L G  AEIAVKR SH++  G   FLAEIS++GR
Sbjct: 330 ELFNATKGFKEKQLLGKGGFGQVYKGTLPGSDAEIAVKRTSHDSRQGMSEFLAEISTIGR 389

Query: 418 LKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAG 477
           L+H +LV L G+C R K +L LVYDYM NGSLDK++ + +    L+ E+R R++KDVA  
Sbjct: 390 LRHPNLVRLLGYC-RHKENLYLVYDYMPNGSLDKYLNRSENQERLTWEQRFRIIKDVATA 448

Query: 478 VLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLA 537
           +L+LH+ W + ++HRDIK +NVL+D EMN RLGDFGLA+++  G    T++V GT GY+A
Sbjct: 449 LLHLHQEWVQVIIHRDIKPANVLIDNEMNARLGDFGLAKLYDQGFDPETSKVAGTFGYIA 508

Query: 538 PEVFSSGRASTQTDVFGFGILILEVLSGRRPIE----EGKPNLVEMVWELMVQGKLLDAL 593
           PE   +GRA+T TDV+ FG+++LEV+ GRR IE    E +  LV+ + EL   GK+ DA 
Sbjct: 509 PEFLRTGRATTSTDVYAFGLVMLEVVCGRRIIERRAAENEEYLVDWILELWENGKIFDAA 568

Query: 594 DARLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLEG 638
           +  +R +   +  +VE VL LG+LC++     RP M  V+++L G
Sbjct: 569 EESIRQEQ--NRGQVELVLKLGVLCSHQAASIRPAMSVVMRILNG 611

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9M9E0|LRKS1_ARATH L-type lectin-domain containing receptor kinase S.1 OS=Arabidopsis thaliana GN=LECRKS1 PE=1 SV=1

 Score =  452 bits (1163), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 278/633 (43%), Positives = 399/633 (63%), Gaps = 42/633 (6%)

Query: 22  SISAVDFVFNGF----NSSNLSLYGTATVESRILTLTN-STTFTIGRALYPSK---IPTK 73
           S SA+DF++N F    N +++ L   + VES +++L N S   + GR  YP K   IP  
Sbjct: 26  SSSAIDFLYNSFSSVTNRTDVILIEDSRVESTVISLINDSDPLSFGRVFYPQKLTIIPDP 85

Query: 74  RPNSSYVYPFSTSFIFAMAPYKGVLAGHGLVFLFVPFHGIKGATEAQHLGLF-NRTNDGN 132
             N + +  FSTSF+F++ P      G GL F+         A  +Q+ GLF N T   N
Sbjct: 86  TRNPTRLSSFSTSFVFSILPDISTSPGFGLCFVLSNSTSPPNAISSQYFGLFTNATVRFN 145

Query: 133 SSNHVFGVEFDVFKNQEFNDIDENHVGIDVNSLTSVSAHAAGYWPDNQTDSSGSNSNSGT 192
           +   +  VEFD  +N E NDID+NHVGID+N++ S ++  AGY+          +S +G 
Sbjct: 146 AP--LLAVEFDTGRNSEVNDIDDNHVGIDLNNIESTTSVTAGYY----------DSVNG- 192

Query: 193 GDDEKSFKELKLNNGKNYQVWIDY--ADSFINITMVEAGMKRPKRPLLSV--PLNLSGVL 248
                SF    + NG N + WID+   +  IN+++   G+ RP+RP L+   P+ ++  +
Sbjct: 193 -----SFVRFNMRNGNNVRAWIDFDGPNFQINVSVAPVGVLRPRRPTLTFRDPV-IANYV 246

Query: 249 EDEMYVGFTAATGQLVESHKILAWSFSNTKFSLSEELITSGLPSFVLPKDSIFKSKGFIA 308
             +MY GF+A+     E+ +ILAWS S+T      E+ T+ LP F L   S   S G IA
Sbjct: 247 SADMYAGFSASKTNWNEARRILAWSLSDT--GALREINTTNLPVFFLENSSSSLSTGAIA 304

Query: 309 GVTVGGLFIIVAVVLCSLFLIKRKQRRAREREEMEDWELEYWPHRITYQEIEAATKGFSE 368
           G+ +G + + VA++    +LI +K  R  E EE+E+WELE+WPHR +Y+E+ AAT+ FS 
Sbjct: 305 GIVIGCV-VFVALIGFGGYLIWKKLMREEEEEEIEEWELEFWPHRFSYEELAAATEVFSN 363

Query: 369 ENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRG 428
           + ++G GG GKVY+G+L    +EIAVK ++H++  G R F+AEISS+GRL+HK+LV +RG
Sbjct: 364 DRLLGSGGFGKVYRGILSNN-SEIAVKCVNHDSKQGLREFMAEISSMGRLQHKNLVQMRG 422

Query: 429 WCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKK 488
           WC+R K  LMLVYDYM NGSL++WIF      M     R +V+ DVA G+ YLH GW++ 
Sbjct: 423 WCRR-KNELMLVYDYMPNGSLNQWIFDNPKEPM-PWRRRRQVINDVAEGLNYLHHGWDQV 480

Query: 489 VLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRAST 548
           V+HRDIKSSN+LLD EM GRLGDFGLA+++ HG   +TTRVVGT+GYLAPE+ S+   + 
Sbjct: 481 VIHRDIKSSNILLDSEMRGRLGDFGLAKLYEHGGAPNTTRVVGTLGYLAPELASASAPTE 540

Query: 549 QTDVFGFGILILEVLSGRRPIEEGKPN---LVEMVWELMVQGKLLDALDARLRAKGGFDE 605
            +DV+ FG+++LEV+SGRRPIE  +     LV+ V +L   G+++DA D R+R++    E
Sbjct: 541 ASDVYSFGVVVLEVVSGRRPIEYAEEEDMVLVDWVRDLYGGGRVVDAADERVRSECETME 600

Query: 606 DEVERVLHLGLLCAYPDPRARPTMRQVVKVLEG 638
            EVE +L LGL C +PDP  RP MR++V +L G
Sbjct: 601 -EVELLLKLGLACCHPDPAKRPNMREIVSLLLG 632

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	705
255536803	728	kinase, putative [Ricinus communis] gi|2	0.977	0.946	0.742	0.0
356549325	684	PREDICTED: L-type lectin-domain containi	0.957	0.986	0.714	0.0
359496168	947	PREDICTED: L-type lectin-domain containi	0.965	0.719	0.734	0.0
147854730	761	hypothetical protein VITISV_003876 [Viti	0.965	0.894	0.733	0.0
356555321	679	PREDICTED: L-type lectin-domain containi	0.939	0.974	0.704	0.0
224125344	681	predicted protein [Populus trichocarpa]	0.939	0.972	0.710	0.0
147815100	1793	hypothetical protein VITISV_005356 [Viti	0.941	0.370	0.726	0.0
126143480	697	lectin-receptor like protein kinase 3 [N	0.964	0.975	0.679	0.0
224105545	675	predicted protein [Populus trichocarpa]	0.926	0.967	0.704	0.0
357446605	687	LRR receptor-like serine/threonine-prote	0.961	0.986	0.677	0.0

>gi|255536803|ref|XP_002509468.1| kinase, putative [Ricinus communis] gi|223549367|gb|EEF50855.1| kinase, putative [Ricinus communis]

 Score = 1070 bits (2768), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 527/710 (74%), Positives = 601/710 (84%), Gaps = 21/710 (2%)

Query: 1   MKNHPKP---LLFSLLLSIFL-SFESISAVDFVFNGFNSSNLSLYGTATVESRILTLTNS 56
           MK H KP   LL  +L+SI L   + I A DFV+NGFNSS+L LYG A +ESRIL+LTN 
Sbjct: 1   MKKHQKPPRFLLVLVLVSIILFCQQPILATDFVYNGFNSSSLLLYGYAVIESRILSLTNE 60

Query: 57  TTFTIGRALYPSKIPTKRPNSSYVYPFSTSFIFAMAPYKGVLAGHGLVFLFVPFHGIKGA 116
           TTFTIGRALYPSKI TK PNSSYVYPFSTSFIFAMAPYK VL GHGLVF+FVP  GI+G 
Sbjct: 61  TTFTIGRALYPSKIRTKDPNSSYVYPFSTSFIFAMAPYKNVLPGHGLVFIFVPIAGIEGT 120

Query: 117 TEAQHLGLFNRTNDGNSSNHVFGVEFDVFKNQEFNDIDENHVGIDVNSLTSVSAHAAGYW 176
           T AQ+LGLFNRTNDGN +NHV G+EFDVF NQEFNDI++NHVGIDVNSLTS  A  AGYW
Sbjct: 121 TTAQNLGLFNRTNDGNPNNHVLGIEFDVFSNQEFNDINDNHVGIDVNSLTSRFAEDAGYW 180

Query: 177 PDNQTDSSGSNSNSGTGDDEKSFKELKLNNGKNYQVWIDYADSFINITMVEAGMKRPKRP 236
            D++  SS         +D KSFK LKLNNG+NYQVWIDYADS INITM   G +RP RP
Sbjct: 181 LDDRRSSS---------EDMKSFKRLKLNNGENYQVWIDYADSLINITMAPVGTRRPSRP 231

Query: 237 LLSVPLNLSGVLEDEMYVGFTAATGQLVESHKILAWSFSNTKFSLSEELITSGLPSFVLP 296
           LL+V ++LSG+ E+EMYVGFTA+TG+LVESHKILAWSFSN+ FSLS+ LIT GLPSFVLP
Sbjct: 232 LLNVSIDLSGIFEEEMYVGFTASTGRLVESHKILAWSFSNSDFSLSDRLITVGLPSFVLP 291

Query: 297 KDSIFKSKGFIAGVTVGGLFIIVAVVLCSLFLIKRKQRRAREREEMEDWELEYWPHRITY 356
           K S F+SKGFIAG T G   +IV+  L +LF I+RKQR+ARER ++E+WELEYWPHRITY
Sbjct: 292 KGSFFRSKGFIAGATAGSFVVIVSAALITLFFIRRKQRKARERADIEEWELEYWPHRITY 351

Query: 357 QEIEAATKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLG 416
           QEIEAATKGFSEENVIG+GGNGKVYKGVL GG AE+AVKRISHENDG  R FLAEISSLG
Sbjct: 352 QEIEAATKGFSEENVIGIGGNGKVYKGVLPGG-AEVAVKRISHENDG-MREFLAEISSLG 409

Query: 417 RLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAA 476
           RLKH++LVGLRGWCK+EKGS MLVYDY+ENGSLDK +F CD S MLSCEERIR+LKDVA+
Sbjct: 410 RLKHRNLVGLRGWCKKEKGSFMLVYDYLENGSLDKRVFDCDESKMLSCEERIRILKDVAS 469

Query: 477 GVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYL 536
           GVLYLHEGWE +VLHRDIK+SNVLLDK+M G++GDFGLARMH HGQVASTTRVVGTVGYL
Sbjct: 470 GVLYLHEGWESRVLHRDIKASNVLLDKDMKGKIGDFGLARMHSHGQVASTTRVVGTVGYL 529

Query: 537 APEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDAR 596
           APEV  SGRAS+QTDVFGFG+LILEV+ GRRPIEEGK  LVE+VW+ M++G+LLDALD R
Sbjct: 530 APEVVRSGRASSQTDVFGFGVLILEVICGRRPIEEGKQPLVELVWQSMMRGQLLDALDPR 589

Query: 597 LRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLEGKIEAGIENETEDMDAYLL 656
           ++A+GGFDE+EVERVLHLGLLC YPD   RPTMRQVVK+LEGK EA  E ETEDMDAYLL
Sbjct: 590 IKARGGFDEEEVERVLHLGLLCGYPDASVRPTMRQVVKILEGKNEAN-ETETEDMDAYLL 648

Query: 657 QQVKSKDMWANYSRSFGYGYATHPTFHDIRQSNSYSMSLSWSNT-IMEGR 705
           Q V SK+MW +YS+    GY++HPTF DIRQS+  SMSLSW+N+ I++GR
Sbjct: 649 QYVNSKEMWLDYSQRL--GYSSHPTFEDIRQSS--SMSLSWTNSVIVDGR 694

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356549325|ref|XP_003543044.1| PREDICTED: L-type lectin-domain containing receptor kinase VII.1-like [Glycine max]

 Score = 1011 bits (2613), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 498/697 (71%), Positives = 581/697 (83%), Gaps = 22/697 (3%)

Query: 9   LFSLLLSIFLSFESISAVDFVFNGFNSSNLSLYGTATVESRILTLTNSTTFTIGRALYPS 68
           L S+LLSI   F S  A+DFVFNGFNSS + L+G ATV+SRILTLT+   F++GRALY  
Sbjct: 10  LPSILLSILFLFNSTCAIDFVFNGFNSSEVLLFGNATVDSRILTLTHQQRFSVGRALYNK 69

Query: 69  KIPTKRPNSSYVYPFSTSFIFAMAPYKGVLAGHGLVFLFVPFHGIKGATEAQHLGLFNRT 128
           KIPTK+PNSS VYPFSTSFIFAMAP++  L GHGLVF+F P  GI+G + AQHLGLFN T
Sbjct: 70  KIPTKKPNSSRVYPFSTSFIFAMAPFEDTLPGHGLVFIFTPVTGIQGTSSAQHLGLFNLT 129

Query: 129 NDGNSSNHVFGVEFDVFKNQEFNDIDENHVGIDVNSLTSVSAHAAGYWPDNQTDSSGSNS 188
           N+GNSSNHVFGVEFDVF+NQEF+DID NHVGID+NSL S  +H AGYWPD          
Sbjct: 130 NNGNSSNHVFGVEFDVFQNQEFDDIDANHVGIDINSLKSYVSHDAGYWPDGA-------- 181

Query: 189 NSGTGDDEKSFKELKLNNGKNYQVWIDYADSFINITMVEAGMKRPKRPLLSVPLNLSGVL 248
                  +KSFKEL LN+G+NYQVWIDY DS+IN+TM   GMKRP RPLL+V LNLS V 
Sbjct: 182 -------DKSFKELTLNSGENYQVWIDYEDSWINVTMAPVGMKRPSRPLLNVSLNLSQVF 234

Query: 249 EDEMYVGFTAATGQLVESHKILAWSFSNTKFSLSEELITSGLPSFVLPKDSIFKSKGFIA 308
           EDEM+VGFT+ATGQLVESHKIL WSFSN KFSLS+ELIT+GLPSFVLPKDSIFKSKGF+A
Sbjct: 235 EDEMFVGFTSATGQLVESHKILGWSFSNEKFSLSDELITTGLPSFVLPKDSIFKSKGFVA 294

Query: 309 GVTVGGLFIIVAVVLCSLFLIKRKQRRAREREEMEDWELEYWPHRITYQEIEAATKGFSE 368
           G TVG  F+I  +VL +LFLI+RK+ + R+R EMEDWELEYWPHR+TY+EIEAATKGFSE
Sbjct: 295 GFTVGVFFVICLLVLLALFLIQRKREKERKRMEMEDWELEYWPHRMTYEEIEAATKGFSE 354

Query: 369 ENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRG 428
           ENVIGVGGNGKVYKGVL GG  E+AVKRISHENDG  R FLAE+SSLGRLK ++LVGLRG
Sbjct: 355 ENVIGVGGNGKVYKGVLRGG-VEVAVKRISHENDG-LREFLAEVSSLGRLKQRNLVGLRG 412

Query: 429 WCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKK 488
           WCK++ G+ +L+YDYMENGSLDK +F CD S MLS E+RIR+LKDVA  VLYLHEGWE K
Sbjct: 413 WCKKDVGNFLLIYDYMENGSLDKRVFDCDESKMLSYEDRIRILKDVAFAVLYLHEGWEDK 472

Query: 489 VLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRAST 548
           V+HRDIK+SNVLLDK+MNGRLGDFGLARMH HGQVASTT++VGTVGY+APEVF +GRAST
Sbjct: 473 VVHRDIKASNVLLDKDMNGRLGDFGLARMHSHGQVASTTKLVGTVGYMAPEVFKTGRAST 532

Query: 549 QTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRAKGGFDEDEV 608
           QTDV+ FGILILEVL GRRP+EEGKP LVE +W+LMVQG++  ALD RLRAKG F+  E+
Sbjct: 533 QTDVYMFGILILEVLCGRRPLEEGKPPLVEWIWQLMVQGQVECALDERLRAKGEFNVQEM 592

Query: 609 ERVLHLGLLCAYPDPRARPTMRQVVKVLEGKIEAGIENETEDMDAYLLQQVKSKDMWANY 668
           ERV+HLGLLCAYP+P+ RPTMRQVV VLEGK E   ++E E+MD YLLQQ+KS+D+ + Y
Sbjct: 593 ERVMHLGLLCAYPEPKTRPTMRQVVNVLEGKNEVE-DSEIENMDTYLLQQLKSRDILSEY 651

Query: 669 SRSFGYGYATHPTFHDIRQSNSYSMSLSWSNTIMEGR 705
           S+ F   Y +HPTF DIR S+  SMSL+WS +++EGR
Sbjct: 652 SQYF--SYTSHPTFQDIRLSS--SMSLTWSESVVEGR 684

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359496168|ref|XP_002270216.2| PREDICTED: L-type lectin-domain containing receptor kinase VII.1 [Vitis vinifera]

 Score =  994 bits (2569), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 504/686 (73%), Positives = 580/686 (84%), Gaps = 5/686 (0%)

Query: 20  FESISAVDFVFNGFNSSNLSLYGTATVESRILTLTNSTTFTIGRALYPSKIPTKRPNSSY 79
           F S SA DFVFNGFNSS++ LYG A +ESR+LTLTN T+F IGRALYPSKIP K PNSS 
Sbjct: 267 FGSASAEDFVFNGFNSSDMLLYGVADIESRVLTLTNQTSFAIGRALYPSKIPAKSPNSSD 326

Query: 80  VYPFSTSFIFAMAPYKGVLAGHGLVFLFVPFHGIKGATEAQHLGLFNRTNDGNSSNHVFG 139
           V PFSTSFIF++APY+ +L GHG+VFLF P  GI+GAT +QHLG  NRTNDGNS+NHVFG
Sbjct: 327 VVPFSTSFIFSIAPYEDILPGHGIVFLFAPVTGIEGATSSQHLGFLNRTNDGNSTNHVFG 386

Query: 140 VEFDVFKNQEFNDIDENHVGIDVNSLTSVSAHAAGYWPDNQTDSSGSNSNSGTGDDEKSF 199
           V+FDVFKN+EF DI +NHVGI+VNSLTS+SAH AGYWPDN   SSG  ++S   +DEKSF
Sbjct: 387 VKFDVFKNEEFGDISDNHVGINVNSLTSMSAHEAGYWPDNGKISSGGGNSSSE-EDEKSF 445

Query: 200 KELKLNNGKNYQVWIDYADSFINITMVEAGMKRPKRPLLSVPLNLSGVLEDEMYVGFTAA 259
           K L+LNNGKNYQVWIDY D  IN+TM  AG  RP+RPLLSV LNLS V  D+MYVGFTAA
Sbjct: 446 KRLQLNNGKNYQVWIDYMDFHINVTMAVAGKTRPQRPLLSVALNLSDVFLDDMYVGFTAA 505

Query: 260 TGQLVESHKILAWSFSNTKFSLSEELITSGLPSFVLPKDSIFKSKGFIAGVTVGGLFIIV 319
           TG+LVESH+ILAWSFSN+ FSLS ELITSGLPSFV PK SIF+SKGFIAG+TVG  F +V
Sbjct: 506 TGRLVESHRILAWSFSNSNFSLSSELITSGLPSFVPPKKSIFQSKGFIAGITVGVFFCVV 565

Query: 320 AVVLCSLFLIKRKQRRAREREEMEDWELEYWPHRITYQEIEAATKGFSEENVIGVGGNGK 379
              + S FLI+ K+ RAR RE ME+WELEYWPHRIT+QEIEAAT GFSEENVIG GGNGK
Sbjct: 566 FCSVFSWFLIRWKRLRARRREGMEEWELEYWPHRITHQEIEAATNGFSEENVIGTGGNGK 625

Query: 380 VYKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLML 439
           VYKGVLEGG AEIAVKRISHEND G R F+AEISSLGRLKH+ LV LRGWCKRE GS ML
Sbjct: 626 VYKGVLEGG-AEIAVKRISHENDQGMREFVAEISSLGRLKHRCLVSLRGWCKRENGSFML 684

Query: 440 VYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNV 499
           VYDYMENGSLDK +F+C+ S +LS ++RIRVLKDVA+GVLYLHEGWE KVLHRDIK+SNV
Sbjct: 685 VYDYMENGSLDKRVFECEESKLLSFKDRIRVLKDVASGVLYLHEGWESKVLHRDIKASNV 744

Query: 500 LLDKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILI 559
           LLD++MNGRLGDFGLARMHGH +V STTRVVGTVGYLAPEV  +GRAS QTDVFGFG+LI
Sbjct: 745 LLDRDMNGRLGDFGLARMHGHDKVGSTTRVVGTVGYLAPEVIRTGRASAQTDVFGFGVLI 804

Query: 560 LEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRAKGGFDEDEVERVLHLGLLCA 619
           LEVL GRRP+EEGK +L++ VWELM++G+L+ ALD RLR++G  DE+EVE+VLHLGLLC 
Sbjct: 805 LEVLCGRRPMEEGKQHLIDWVWELMMKGELVLALDERLRSRGELDEEEVEKVLHLGLLCT 864

Query: 620 YPDPRARPTMRQVVKVLEGKIEAGIENETEDMDAYLLQQVKSKDMWANYSRSFGYGYATH 679
           YPDP ARPTMRQVVK+LEG  E   E+E E+MDAYLL+ V+SK MW+ YS +FG G  +H
Sbjct: 865 YPDPSARPTMRQVVKILEGGNEV-CESEGEEMDAYLLESVRSKSMWSKYSHTFGRG--SH 921

Query: 680 PTFHDIRQSNSYSMSLSWSNTIMEGR 705
           PTF D RQS + SMS+SWS+ I++GR
Sbjct: 922 PTFEDFRQSLASSMSMSWSDAILDGR 947

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147854730|emb|CAN78607.1| hypothetical protein VITISV_003876 [Vitis vinifera]

 Score =  989 bits (2557), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 503/686 (73%), Positives = 579/686 (84%), Gaps = 5/686 (0%)

Query: 20  FESISAVDFVFNGFNSSNLSLYGTATVESRILTLTNSTTFTIGRALYPSKIPTKRPNSSY 79
           F S SA DFVFNGFNSS++ LYG A +ESR+LTLTN T+F IGRALYPSKIP K PNSS 
Sbjct: 18  FGSASAEDFVFNGFNSSDMLLYGVADIESRVLTLTNQTSFAIGRALYPSKIPAKSPNSSD 77

Query: 80  VYPFSTSFIFAMAPYKGVLAGHGLVFLFVPFHGIKGATEAQHLGLFNRTNDGNSSNHVFG 139
           V PFSTSFIF++APY+ +L GHG+VFLF P  GI+GAT +QHLG  NRTNDGNS+NHVFG
Sbjct: 78  VVPFSTSFIFSIAPYEDILPGHGIVFLFAPVTGIEGATSSQHLGFLNRTNDGNSTNHVFG 137

Query: 140 VEFDVFKNQEFNDIDENHVGIDVNSLTSVSAHAAGYWPDNQTDSSGSNSNSGTGDDEKSF 199
           V+FDVFKN+EF DI +NHVGI+VNSLTS+SAH AGYWPDN   SSG  ++S   +DEKSF
Sbjct: 138 VKFDVFKNEEFGDISDNHVGINVNSLTSMSAHEAGYWPDNGKISSGGGNSSSE-EDEKSF 196

Query: 200 KELKLNNGKNYQVWIDYADSFINITMVEAGMKRPKRPLLSVPLNLSGVLEDEMYVGFTAA 259
           K L+LNNGKNYQVWIDY D  IN+TM  AG  RP+RPLLSV LNLS V  D+MYVGFTAA
Sbjct: 197 KRLQLNNGKNYQVWIDYMDFHINVTMAVAGKTRPQRPLLSVALNLSDVFLDDMYVGFTAA 256

Query: 260 TGQLVESHKILAWSFSNTKFSLSEELITSGLPSFVLPKDSIFKSKGFIAGVTVGGLFIIV 319
           TG+LVESH+ILAWSFSN+ FSLS ELITSGLPSFV PK SIF+SKGFI G+TVG  F +V
Sbjct: 257 TGRLVESHRILAWSFSNSNFSLSSELITSGLPSFVPPKKSIFQSKGFIXGITVGVFFCVV 316

Query: 320 AVVLCSLFLIKRKQRRAREREEMEDWELEYWPHRITYQEIEAATKGFSEENVIGVGGNGK 379
              + S FLI+ K+ RAR RE ME+WELEYWPHRIT+QEIEAAT GFSEENVIG GGNGK
Sbjct: 317 FCSVFSWFLIRWKRLRARRREGMEEWELEYWPHRITHQEIEAATNGFSEENVIGTGGNGK 376

Query: 380 VYKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLML 439
           VYKGVLEGG AEIAVKRISHEND G R F+AEISSLGRLKH+ LV LRGWCKRE GS ML
Sbjct: 377 VYKGVLEGG-AEIAVKRISHENDQGMREFVAEISSLGRLKHRCLVSLRGWCKRENGSFML 435

Query: 440 VYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNV 499
           VYDYMENGSLDK +F+C+ S +LS ++RIRVLKDVA+GVLYLHEGWE KVLHRDIK+SNV
Sbjct: 436 VYDYMENGSLDKRVFECEESKLLSFKDRIRVLKDVASGVLYLHEGWESKVLHRDIKASNV 495

Query: 500 LLDKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILI 559
           LLD++MNGRLGDFGLARMHGH +V STTRVVGTVGYLAPEV  +GRAS QTDVFGFG+LI
Sbjct: 496 LLDRDMNGRLGDFGLARMHGHDKVGSTTRVVGTVGYLAPEVIRTGRASAQTDVFGFGVLI 555

Query: 560 LEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRAKGGFDEDEVERVLHLGLLCA 619
           LEVL GRRP+EEGK +L++ VWELM++G+L+ ALD RLR++G  DE+EVE+VLHLGLLC 
Sbjct: 556 LEVLCGRRPMEEGKQHLIDWVWELMMKGELVLALDERLRSRGELDEEEVEKVLHLGLLCT 615

Query: 620 YPDPRARPTMRQVVKVLEGKIEAGIENETEDMDAYLLQQVKSKDMWANYSRSFGYGYATH 679
           YPDP ARPTMRQVVK+LEG  E   E+E E+MDAYLL+ V+SK MW+ YS +FG G  +H
Sbjct: 616 YPDPSARPTMRQVVKILEGGNEV-CESEGEEMDAYLLESVRSKSMWSKYSHTFGRG--SH 672

Query: 680 PTFHDIRQSNSYSMSLSWSNTIMEGR 705
           PTF D RQS + SMS+SWS+ I++GR
Sbjct: 673 PTFEDFRQSLASSMSMSWSDAILDGR 698

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356555321|ref|XP_003545982.1| PREDICTED: L-type lectin-domain containing receptor kinase VII.1-like [Glycine max]

 Score =  973 bits (2514), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 483/686 (70%), Positives = 565/686 (82%), Gaps = 24/686 (3%)

Query: 20  FESISAVDFVFNGFNSSNLSLYGTATVESRILTLTNSTTFTIGRALYPSKIPTKRPNSSY 79
           F S  A+DFVFNGFNSS + L+G AT++SRILTLT+  +F++GRALY  KIP K+PNSSY
Sbjct: 18  FNSACAIDFVFNGFNSSEVLLFGNATIDSRILTLTHQQSFSVGRALYKEKIPAKKPNSSY 77

Query: 80  VYPFSTSFIFAMAPYKGVLAGHGLVFLFVPFHGIKGATEAQHLGLFNRTNDGNSSNHVFG 139
           VYPFS SFIFAMAP++  L GHGLVF+F P  GI G + AQHLGLFN TN+GNSSNHVFG
Sbjct: 78  VYPFSISFIFAMAPFEDTLPGHGLVFIFTPITGIHGTSSAQHLGLFNLTNNGNSSNHVFG 137

Query: 140 VEFDVFKNQEFNDIDENHVGIDVNSLTSVSAHAAGYWPDNQTDSSGSNSNSGTGDDEKSF 199
           VEFDVF+NQEF+DI+ NHVGID+NSL S  +H AGYWPD              GD  KSF
Sbjct: 138 VEFDVFQNQEFDDINANHVGIDINSLKSYVSHDAGYWPDG-------------GD--KSF 182

Query: 200 KELKLNNGKNYQVWIDYADSFINITMVEAGMKRPKRPLLSVPLNLSGVLEDEMYVGFTAA 259
           KEL LN+G+NYQVWIDY DS++N+TM   GMKRP RPL +V LNLS V EDEM+VGFT+A
Sbjct: 183 KELALNSGENYQVWIDYEDSWVNVTMAPVGMKRPSRPLFNVSLNLSQVFEDEMFVGFTSA 242

Query: 260 TGQLVESHKILAWSFSNTKFSLSEELITSGLPSFVLPKDSIFKSKGFIAGVTVGGLFIIV 319
           TGQLVESHKIL WSFSN  FSLS+ELIT GLPSFVLPKDSIFKSKG +AG TVG  F++ 
Sbjct: 243 TGQLVESHKILGWSFSNENFSLSDELITIGLPSFVLPKDSIFKSKGLVAGFTVGVFFVVC 302

Query: 320 AVVLCSLFLIKRKQRRAREREEMEDWELEYWPHRITYQEIEAATKGFSEENVIGVGGNGK 379
            +VL +LFLI+RK+ + R+R EMEDWELEYWPHR+ Y+EIEAATKGFSEENVIGVGGNGK
Sbjct: 303 LLVLLALFLIQRKRVKERKRLEMEDWELEYWPHRMAYEEIEAATKGFSEENVIGVGGNGK 362

Query: 380 VYKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLML 439
           VYKGVL GG  E+AVKRISHENDG  R FLAE+SSLGRLK ++LVGLRGWCK++ G+ +L
Sbjct: 363 VYKGVLRGG-VEVAVKRISHENDG-LREFLAEVSSLGRLKQRNLVGLRGWCKKDVGNFLL 420

Query: 440 VYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNV 499
           +YDYMEN SLDKW+F CD S MLS E+RIR+LKDVA  VLYLHEGWE KV+HRDIK+SNV
Sbjct: 421 IYDYMENRSLDKWVFDCDESKMLSYEDRIRILKDVAFAVLYLHEGWEAKVVHRDIKASNV 480

Query: 500 LLDKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILI 559
           LLDK+MNGRLGDFGLARMH H QVASTT++VGTVGY+APEV  +GRASTQTDV+ FGILI
Sbjct: 481 LLDKDMNGRLGDFGLARMHSHDQVASTTKLVGTVGYMAPEVIKTGRASTQTDVYMFGILI 540

Query: 560 LEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRAKGGFDEDEVERVLHLGLLCA 619
           LEVL GRRP+EEGK  LVE +W+LMVQG++  ALD RLRAKG F+  E+ERV+HLGLLCA
Sbjct: 541 LEVLCGRRPLEEGKSPLVEWIWQLMVQGQVECALDERLRAKGDFNVQEMERVMHLGLLCA 600

Query: 620 YPDPRARPTMRQVVKVLEGKIEAGIENETEDMDAYLLQQVKSKDMWANYSRSFGYGYATH 679
           YP+P+ARPTMRQVV VLEGK E   ++E E+MD YLLQQ+KS+D+ + YS+ F   Y +H
Sbjct: 601 YPEPKARPTMRQVVNVLEGKNEVD-DSEIENMDTYLLQQLKSRDILSEYSQYF--SYTSH 657

Query: 680 PTFHDIRQSNSYSMSLSWSNTIMEGR 705
           PTF DIR S+  SMSL+WS   +EGR
Sbjct: 658 PTFQDIRHSS--SMSLTWSE--VEGR 679

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224125344|ref|XP_002329782.1| predicted protein [Populus trichocarpa] gi|222870844|gb|EEF07975.1| predicted protein [Populus trichocarpa]

 Score =  966 bits (2497), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 493/694 (71%), Positives = 571/694 (82%), Gaps = 32/694 (4%)

Query: 9   LFSLLLSIFLSFESISAVDFVFNGFNSSNLSLYGTATVESRILTLTNSTTFTIGRALYPS 68
           L SLLL I L  + ISA+DFVFNGFNSS++SLYG+A +ESRILTLTN T+F IGRAL+P+
Sbjct: 10  LVSLLLPIILFLQPISAIDFVFNGFNSSSVSLYGSAIIESRILTLTNQTSFQIGRALFPT 69

Query: 69  KIPTKRPNSSYVYPFSTSFIFAMAPYKGVLAGHGLVFLFVPFHGIKGATEAQHLGLFNRT 128
           KIPTK PNSS+V+PFSTSFIFAMAPYK VL GHGLVFLFVPF GI+G++ AQ+LG  N T
Sbjct: 70  KIPTKAPNSSFVHPFSTSFIFAMAPYKNVLPGHGLVFLFVPFTGIQGSSSAQNLGFLNFT 129

Query: 129 NDGNSSNHVFGVEFDVFKNQEFNDIDENHVGIDVNSLTSVSAHAAGYWPDNQTDSSGSNS 188
           N  +S NH+ G+EFDVF N+EF+D+++NHVGIDVNSLTS+ A  AGYWPDN   SS  N+
Sbjct: 130 NGNSSDNHMLGIEFDVFANEEFSDMNDNHVGIDVNSLTSIKAADAGYWPDNSRSSSNENT 189

Query: 189 NSGTGDDEKSFKELKLNNGKNYQVWIDYADSFINITMVEAGMKRPKRPLLSVPLNLSGVL 248
              + +D  SFKE  LNNGKNYQVWIDY DS IN+TM  AGMKRP RPLL+V LNLS V 
Sbjct: 190 ---SDEDSNSFKEQDLNNGKNYQVWIDYEDSIINVTMAPAGMKRPTRPLLNVSLNLSDVF 246

Query: 249 EDEMYVGFTAATGQLVESHKILAWSFSNTKFSLSEELITSGLPSFVLPKDSIFKSKGFIA 308
           EDEMYVGFT++TG LVE+HKILAWSFSN+ FSLSE LIT+GLPSFVLPKD  ++SK FIA
Sbjct: 247 EDEMYVGFTSSTGLLVENHKILAWSFSNSNFSLSERLITTGLPSFVLPKDPFYRSKVFIA 306

Query: 309 GVTVGGLFIIVAVVLCSLFLIKRKQRRAREREEMEDWELEYWPHRITYQEIEAATKGFSE 368
           G TVGG+ +                     REEMEDWELEYWPH++ YQEIEAATKGFSE
Sbjct: 307 GATVGGVLL---------------------REEMEDWELEYWPHQVRYQEIEAATKGFSE 345

Query: 369 ENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRG 428
           ENVIG+GGNGKVYKGVL GG  EIAVKRISHENDG  R FLAEISSLGRLKH+SLVGLRG
Sbjct: 346 ENVIGIGGNGKVYKGVLPGG-TEIAVKRISHENDG-MREFLAEISSLGRLKHRSLVGLRG 403

Query: 429 WCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKK 488
           WCKRE+G  MLVYDYMENGSL+K +F CD S MLSCEERIR+LKDVA+ +LYLHEGW+ +
Sbjct: 404 WCKRERGVFMLVYDYMENGSLEKRVFDCDESKMLSCEERIRILKDVASALLYLHEGWDSQ 463

Query: 489 VLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRAST 548
           VLHRDIK+SNVLLDK+MNGRLGDFGLAR+HGHGQV STTRVVGT+GY+APEV  SGRAS 
Sbjct: 464 VLHRDIKASNVLLDKDMNGRLGDFGLARVHGHGQVPSTTRVVGTIGYMAPEVVRSGRASA 523

Query: 549 QTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRAKG-GFDEDE 607
           +TDVFGFG+LILEV+ GRRPIEEG+P L+E VW+LM+QG+ L ALD RL+A+G  FDE E
Sbjct: 524 RTDVFGFGVLILEVMCGRRPIEEGQPPLLESVWQLMMQGQSLYALDERLKARGEQFDEGE 583

Query: 608 VERVLHLGLLCAYPDPRARPTMRQVVKVLEGKIEAGIENETEDMDAYLLQQVKSKDMWAN 667
           VER+LHLGLLCAYPD + RPTMRQVVKV+EG  E   E E+EDMDA LLQQ+KSKD W++
Sbjct: 584 VERMLHLGLLCAYPDSKGRPTMRQVVKVMEGNNELS-EIESEDMDACLLQQMKSKDFWSS 642

Query: 668 YSRSFGYGYATHPTFHDIRQSNSYSMSLSWSNTI 701
            + S G    +HPTF +IR+ +S SMSLSWSNT+
Sbjct: 643 LNSSHG----SHPTFDEIRRHHSSSMSLSWSNTM 672

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147815100|emb|CAN76892.1| hypothetical protein VITISV_005356 [Vitis vinifera]

 Score =  960 bits (2482), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 486/669 (72%), Positives = 558/669 (83%), Gaps = 5/669 (0%)

Query: 20  FESISAVDFVFNGFNSSNLSLYGTATVESRILTLTNSTTFTIGRALYPSKIPTKRPNSSY 79
           F   SAVDFVFNGFNSS++ LYG A +ESR LTLTN T F IGRALYPSK+P K PNSS+
Sbjct: 18  FRLASAVDFVFNGFNSSDMLLYGVADIESRFLTLTNHTRFAIGRALYPSKVPAKSPNSSH 77

Query: 80  VYPFSTSFIFAMAPYKGVLAGHGLVFLFVPFHGIKGATEAQHLGLFNRTNDGNSSNHVFG 139
           V PFSTSFIF+MAPYK ++ GHG+VFLF P  GI+G T AQ+LG  N TN+GNS NHVFG
Sbjct: 78  VVPFSTSFIFSMAPYKDMIPGHGIVFLFAPVTGIEGTTSAQNLGFLNHTNNGNSINHVFG 137

Query: 140 VEFDVFKNQEFNDIDENHVGIDVNSLTSVSAHAAGYWPDNQTDSSGSNSNSGTGDDEKSF 199
           V FDVF+N+EF+DI  NHVGI+VNSLTS+SAH AGYWPDN   SSG  ++S   +DEKSF
Sbjct: 138 VXFDVFQNEEFDDISNNHVGINVNSLTSMSAHEAGYWPDNXKISSGGGNSSSE-EDEKSF 196

Query: 200 KELKLNNGKNYQVWIDYADSFINITMVEAGMKRPKRPLLSVPLNLSGVLEDEMYVGFTAA 259
           K L+LNNGKNYQVWIDY D  +N+TM EAG  RP+RPLLSV LNLS V  D+MYVGFTAA
Sbjct: 197 KRLQLNNGKNYQVWIDYLDLHLNVTMAEAGKTRPQRPLLSVALNLSDVFLDDMYVGFTAA 256

Query: 260 TGQLVESHKILAWSFSNTKFSLSEELITSGLPSFVLPKDSIFKSKGFIAGVTVGGLFIIV 319
           TG+LVESH+ILAWSFSN+ FSLS ELITSGLPSFV PK SIF+SKGFI G+TVG  F +V
Sbjct: 257 TGRLVESHRILAWSFSNSNFSLSSELITSGLPSFVPPKKSIFQSKGFIXGITVGVFFCVV 316

Query: 320 AVVLCSLFLIKRKQRRAREREEMEDWELEYWPHRITYQEIEAATKGFSEENVIGVGGNGK 379
              + S FLI+ K+ RAR RE ME+WELEYWPHRIT+QEIEAAT GFSEENVIG GGNGK
Sbjct: 317 FCSVFSWFLIRWKRLRARRREGMEEWELEYWPHRITHQEIEAATNGFSEENVIGTGGNGK 376

Query: 380 VYKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLML 439
           VYKGVLEGG AEIAVKRISHEND G R F+AEISSLGRLKH+ LV LRGWCKRE GS ML
Sbjct: 377 VYKGVLEGG-AEIAVKRISHENDQGMREFVAEISSLGRLKHRCLVSLRGWCKRENGSFML 435

Query: 440 VYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNV 499
           VYDYMENGSLDK +F+C+ S +LS ++RIRVLKDVA+GVLYLHEGWE  VLHRDIK+SNV
Sbjct: 436 VYDYMENGSLDKRVFECEESXJLSFKDRIRVLKDVASGVLYLHEGWESXVLHRDIKASNV 495

Query: 500 LLDKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILI 559
           LLDK+MNGRLGDFGLARMHGH +V STTRVVGTVGYLAPEV  +GRAS QTDVFGFG+LI
Sbjct: 496 LLDKDMNGRLGDFGLARMHGHDKVGSTTRVVGTVGYLAPEVIRTGRASAQTDVFGFGVLI 555

Query: 560 LEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRAKGGFDEDEVERVLHLGLLCA 619
           LEVL GRRP+EEGKP+L++ +WELM +G+L+ ALD RLR++G  DE+EVE+VLHLGLLC 
Sbjct: 556 LEVLCGRRPMEEGKPHLIDWLWELMRKGELVLALDERLRSRGELDEEEVEKVLHLGLLCT 615

Query: 620 YPDPRARPTMRQVVKVLEGKIEAGIENETEDMDAYLLQQVKSKDMWANYSRSFGYGYATH 679
           YPDP ARPTMRQVVK+LEG+ E   E+E E+MD YLL+ ++SK MW+ Y  +FG G  +H
Sbjct: 616 YPDPSARPTMRQVVKILEGRNEV-CESEGEEMDVYLLESMRSKSMWSKYPHTFGRG--SH 672

Query: 680 PTFHDIRQS 688
           PT  D RQS
Sbjct: 673 PTXEDFRQS 681

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|126143480|dbj|BAF47279.1| lectin-receptor like protein kinase 3 [Nicotiana tabacum]

 Score =  951 bits (2458), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 469/690 (67%), Positives = 561/690 (81%), Gaps = 10/690 (1%)

Query: 17  FLSFESISAVDFVFNGFNSSNLSLYGTATVESRILTLTNSTTFTIGRALYPSKIPTKRPN 76
           F   +S+SA+DFVFNGF  S++SL+G AT+ES ILTLTN +TF+IGRAL+PSKI TK PN
Sbjct: 17  FSCIQSVSAIDFVFNGFKPSDISLFGIATIESGILTLTNDSTFSIGRALHPSKIVTKAPN 76

Query: 77  SSYVYPFSTSFIFAMAPYKGVLAGHGLVFLFVPFHGIKGATEAQHLGLFNRTNDGNSSNH 136
           SS V PFS SFIFAMAP+K  L GHG+VFLFVP  GI G T +Q+LG  N TN+GN  NH
Sbjct: 77  SSQVLPFSASFIFAMAPFKDRLPGHGIVFLFVPQTGIDGTTSSQNLGFLNFTNNGNPDNH 136

Query: 137 VFGVEFDVFKNQEFNDIDENHVGIDVNSLTSVSAHAAGYWPDNQTDSSGSNSNSGTGDDE 196
           VFGVEFDVFKNQEFNDI++NHVGIDVNSL SV AH AGYWPD     S   S      +E
Sbjct: 137 VFGVEFDVFKNQEFNDINDNHVGIDVNSLASVFAHEAGYWPDKYNKFSDDGSL-----NE 191

Query: 197 KSFKELKLNNGKNYQVWIDYADSFINITMVEAGMKRPKRPLLSVPLNLSGVLEDEMYVGF 256
           +SF+ LKLNNG+NYQVWIDYAD  IN+TM   GMKRPK+PLL  PLNLS V E+EMYVGF
Sbjct: 192 ESFETLKLNNGRNYQVWIDYADFQINVTMAPIGMKRPKQPLLDFPLNLSQVFEEEMYVGF 251

Query: 257 TAATGQLVESHKILAWSFSNTKFSLSEELITSGLPSFVLPKDSIFKSKGFIAGVTVGGLF 316
           TA+TG L + HKILAWSFSN+ FS+S+ LIT GLPSF LPKD + +SKGFIAG+TV  LF
Sbjct: 252 TASTGDLAQGHKILAWSFSNSNFSISDALITQGLPSFELPKDPVHRSKGFIAGMTVSLLF 311

Query: 317 IIVAVVLCSLFLIKRKQRRAREREEMEDWELEYWPHRITYQEIEAATKGFSEENVIGVGG 376
           ++V   + SLFLIKR +R  REREEMEDWELEYWPHRI+YQEI+AATKGF++ENVIG+GG
Sbjct: 312 LVVVTAVVSLFLIKRNRRMKREREEMEDWELEYWPHRISYQEIDAATKGFADENVIGIGG 371

Query: 377 NGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGS 436
           NGKVYKGVL  G +E+AVKRISHE+  G R FLAEISSLGRLKH++LV LRGWCK+++ S
Sbjct: 372 NGKVYKGVL-AGSSEVAVKRISHESSEGARQFLAEISSLGRLKHRNLVSLRGWCKKDRRS 430

Query: 437 LMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKS 496
           L+LVYDYMENGSLDK +F+CD + MLS E+RIR+LKDVA+GVLYLHEGWE KVLHRDIK+
Sbjct: 431 LILVYDYMENGSLDKTLFECDETNMLSFEDRIRILKDVASGVLYLHEGWEAKVLHRDIKA 490

Query: 497 SNVLLDKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFG 556
           SNVLLDK+MN RLGDFGLARMH HGQVA+TTRVVGTVGYLAPE   +GRASTQTDVFG+G
Sbjct: 491 SNVLLDKDMNARLGDFGLARMHDHGQVANTTRVVGTVGYLAPEFVKTGRASTQTDVFGYG 550

Query: 557 ILILEVLSGRRPI-EEGKPNLVEMVWELMVQGKLLDALDARLRAKGGFDEDEVERVLHLG 615
           +L+LEV+ GRRPI EEGKP L++ +WELM +G+L++A D RLR    F+E+E  RVL LG
Sbjct: 551 VLVLEVMCGRRPIEEEGKPPLLDWLWELMRRGELINAFDRRLRTSQDFNEEEALRVLQLG 610

Query: 616 LLCAYPDPRARPTMRQVVKVLEGKIEAGIENETEDMDAYLLQQVKSKDMWANYSRSFGYG 675
           ++CA  DP+ RPTMRQVVK  E   EA  E+E EDMD YLL+ ++S  M +N+S S  +G
Sbjct: 611 MICASLDPKGRPTMRQVVKFFERNSEAD-ESEAEDMDVYLLETLRSNTMLSNFSLSLSHG 669

Query: 676 YATHPTFHDIRQSNSYSMSLSWSNTIMEGR 705
             +HPTF +IR+  S SMS+SW+N++++GR
Sbjct: 670 --SHPTFEEIREGLSSSMSISWTNSLVDGR 697

Source: Nicotiana tabacum

Species: Nicotiana tabacum

Genus: Nicotiana

Family: Solanaceae

Order: Solanales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224105545|ref|XP_002333803.1| predicted protein [Populus trichocarpa] gi|222838541|gb|EEE76906.1| predicted protein [Populus trichocarpa]

 Score =  947 bits (2447), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 483/686 (70%), Positives = 561/686 (81%), Gaps = 33/686 (4%)

Query: 21  ESISAVDFVFNGFNSSNLSLYGTATVESRILTLTNSTTFTIGRALYPSKIPTKRPNSSYV 80
           + ISA+DFVFNGFNSS++SLYG+A +ESRILTLTN T+F IGRALYP+KIPTK PNSS+V
Sbjct: 22  QPISAIDFVFNGFNSSSVSLYGSAIIESRILTLTNQTSFQIGRALYPTKIPTKAPNSSFV 81

Query: 81  YPFSTSFIFAMAPYKGVLAGHGLVFLFVPFHGIKGATEAQHLGLFNRTNDGNSSNHVFGV 140
           YPFSTSFIFAM PYK VL GHGL FLFVPF  I+ +  AQ+LG  NRTN   S +H+ G+
Sbjct: 82  YPFSTSFIFAMVPYKNVLPGHGLAFLFVPFTSIQSSISAQYLGFLNRTNGNRSDDHLLGI 141

Query: 141 EFDVFKNQEFNDIDENHVGIDVNSLTSVSAHAAGYWPDNQTDSSGSNSNSGTGDDEKSFK 200
           EFDVF N+EF+D+++NHVGIDVN+LTS+ A  AGYWPDN   SS  N+   + +D  SFK
Sbjct: 142 EFDVFANEEFSDMNDNHVGIDVNTLTSIKAADAGYWPDNSRSSSNENT---SDEDSNSFK 198

Query: 201 ELKLNNGKNYQVWIDYADSFINITMVEAGMKRPKRPLLSVPLNLSGVLEDEMYVGFTAAT 260
           E  LNNGKNYQVWIDY DS IN+TM  AGMKRP RPLL+V LNLS V EDEMYVGFT++T
Sbjct: 199 EQDLNNGKNYQVWIDYEDSIINVTMAPAGMKRPTRPLLNVSLNLSDVFEDEMYVGFTSST 258

Query: 261 GQLVESHKILAWSFSNTKFSLSEELITSGLPSFVLPKDSIFKSKGFIAGVTVGGLFIIVA 320
           G LVE+HKILAWSFSN+ FSLSE LIT+GLPSFVLPKD  ++SK FIAG TVGG+ +   
Sbjct: 259 GLLVENHKILAWSFSNSNFSLSERLITTGLPSFVLPKDPFYRSKVFIAGATVGGVLL--- 315

Query: 321 VVLCSLFLIKRKQRRAREREEMEDWELEYWPHRITYQEIEAATKGFSEENVIGVGGNGKV 380
                             REEMEDWELEYWPH++ YQEIEAATKGFSEENVIG+GGNGKV
Sbjct: 316 ------------------REEMEDWELEYWPHQVRYQEIEAATKGFSEENVIGIGGNGKV 357

Query: 381 YKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLV 440
           YKGVL GG  EIAVKRISHENDG  R FLAEISSLGRLKH+SLVGLRGWCKRE+G  MLV
Sbjct: 358 YKGVLPGG-TEIAVKRISHENDG-MREFLAEISSLGRLKHRSLVGLRGWCKRERGVFMLV 415

Query: 441 YDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVL 500
           YDYMENGSL+K +F CD S MLSCEERIR+LKDVA+ +LYLHEGW+ +VLHRDIK+SNVL
Sbjct: 416 YDYMENGSLEKRVFDCDESKMLSCEERIRILKDVASALLYLHEGWDSQVLHRDIKASNVL 475

Query: 501 LDKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILIL 560
           LDK+MNGRLGDFGLAR+HGHGQV STTRVVGT+GY+APEV  SGRAS +TDVFGFG+LIL
Sbjct: 476 LDKDMNGRLGDFGLARVHGHGQVPSTTRVVGTIGYMAPEVVRSGRASARTDVFGFGVLIL 535

Query: 561 EVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRAKG-GFDEDEVERVLHLGLLCA 619
           EV+ GRRPIEEG+P L+E VW+LM+QG+ L ALD RL+A+G  FDE EVER+LHLGLLCA
Sbjct: 536 EVMCGRRPIEEGQPPLLESVWQLMMQGQSLYALDERLKARGEQFDEGEVERMLHLGLLCA 595

Query: 620 YPDPRARPTMRQVVKVLEGKIEAGIENETEDMDAYLLQQVKSKDMWANYSRSFGYGYATH 679
           YPD + RPTMRQVVKV+EG  E   E E+ED+DA LLQQ+KS D+W+++S        +H
Sbjct: 596 YPDSKGRPTMRQVVKVMEGNNELS-EIESEDLDACLLQQMKSTDLWSSHSSH-----GSH 649

Query: 680 PTFHDIRQSNSYSMSLSWSNTIMEGR 705
           PTF +IR+ +S SMSLSWSNT +EGR
Sbjct: 650 PTFDEIRRHHSSSMSLSWSNTTVEGR 675

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357446605|ref|XP_003593578.1| LRR receptor-like serine/threonine-protein kinase FEI [Medicago truncatula] gi|355482626|gb|AES63829.1| LRR receptor-like serine/threonine-protein kinase FEI [Medicago truncatula]

 Score =  934 bits (2413), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 474/700 (67%), Positives = 579/700 (82%), Gaps = 22/700 (3%)

Query: 9   LFSLLLS---IFLSFESISAVDFVFNGFNSSNLSLYGTATVESRILTLTNSTTFTIGRAL 65
           L+ LLLS    FL F SISA+DF+FNGFNSSN+ L+G AT++S+ILTLT+  +F++GRAL
Sbjct: 7   LYLLLLSTTIFFLLFNSISAIDFIFNGFNSSNVLLFGNATIDSQILTLTHQQSFSVGRAL 66

Query: 66  YPSKIPTKRPNSSYVYPFSTSFIFAMAPYKGVLAGHGLVFLFVPFHGIKGATEAQHLGLF 125
           YP KIPTK  NSSYVYPFSTSFIF+MAP++  L GHGLVF+F P  GI+G + AQHLGLF
Sbjct: 67  YPKKIPTK--NSSYVYPFSTSFIFSMAPFEDTLPGHGLVFIFTPVKGIEGTSSAQHLGLF 124

Query: 126 NRTNDGNSSNHVFGVEFDVFKNQEFNDIDENHVGIDVNSLTSVSAHAAGYWPDNQTDSSG 185
           N +N+GNS+NHVFGVEFDVF NQEFNDI+ NHVGID+NSL SV +H  G+W D++     
Sbjct: 125 NLSNNGNSNNHVFGVEFDVFMNQEFNDINANHVGIDINSLNSVVSHDVGFWVDDEK---- 180

Query: 186 SNSNSGTGDDEKSFKELKLNNGKNYQVWIDYADSFINITMVEAGMKRPKRPLLSVPLNLS 245
                   + ++ F++L LNNG+NYQVWIDY DS IN+T+ + GMKRP RPLL+V LNLS
Sbjct: 181 -------SEKDQIFEKLVLNNGENYQVWIDYKDSLINVTIAKLGMKRPIRPLLNVSLNLS 233

Query: 246 GVLEDEMYVGFTAATGQLVESHKILAWSFSNTKFSLSEELITSGLPSFVLPKDSIFKSKG 305
            V EDEM+VGFT++TGQLVESHKILAWSFSN  FSLS+EL+TSGLPSFVLP DSIFKSKG
Sbjct: 234 DVFEDEMFVGFTSSTGQLVESHKILAWSFSNANFSLSDELVTSGLPSFVLPNDSIFKSKG 293

Query: 306 FIAGVTVGGLFIIVAVVLCSLFLIKRKQRRAREREEMEDWELEYWPHRITYQEIEAATKG 365
           F+AG +VG  FII  +VL  LFLI++K++  ++R EMEDWELEYWPHR+TY+EIEA+TKG
Sbjct: 294 FVAGFSVGVFFIICVLVLLVLFLIQKKRKIDKKRSEMEDWELEYWPHRMTYEEIEASTKG 353

Query: 366 FSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVG 425
           FSE+NVIGVGGNGKVYKGVL GG   IAVK ISHEN+G  R FLAE+S+LGRLK ++LVG
Sbjct: 354 FSEKNVIGVGGNGKVYKGVLRGG-VVIAVKHISHENNG-MREFLAEVSTLGRLKQRNLVG 411

Query: 426 LRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGW 485
           LRGWCK+  G+ +LVY+YMENGSLDK +F CD S ML+ E+RIR++KDVA  VLYLHEGW
Sbjct: 412 LRGWCKKNAGNFLLVYEYMENGSLDKRVFDCDESKMLNFEDRIRIIKDVAHAVLYLHEGW 471

Query: 486 EKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGR 545
           E KV+HRDIK+SNVLLDK+MNG+LGDFGLARM  HGQVASTT++VGTVGY+APEV  +GR
Sbjct: 472 EVKVVHRDIKASNVLLDKDMNGKLGDFGLARMQDHGQVASTTKLVGTVGYMAPEVIKTGR 531

Query: 546 ASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRAKGGFDE 605
           AST TDV+ FGILILEV+ GRRP+EEGKP+LVE VW+LMVQG+L++ALD RLR KG F E
Sbjct: 532 ASTHTDVYMFGILILEVMCGRRPLEEGKPSLVEFVWKLMVQGELVNALDQRLRDKGEFSE 591

Query: 606 DEVERVLHLGLLCAYPDPRARPTMRQVVKVLEGKIEAGIENETEDMDAYLLQQVKSKDMW 665
            E+ER+LHLGLLCAYP+P++RPTMRQVV +LEGK E   E+E E+MD+YLLQQ+KS+D+ 
Sbjct: 592 QELERLLHLGLLCAYPEPKSRPTMRQVVNILEGKNEGVEESEIENMDSYLLQQLKSRDIL 651

Query: 666 ANYSRSFGYGYATHPTFHDIRQSNSYSMSLSWSNTIMEGR 705
           A YS+ F   YA+HPTF DI   +  S S +WS ++++GR
Sbjct: 652 AEYSQYF--SYASHPTFQDIGHFS--STSFTWSGSLVQGR 687

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	705
TAIR|locus:2138381	686	AT4G04960 [Arabidopsis thalian	0.936	0.962	0.587	4.4e-203
TAIR|locus:2040681	675	RLK "receptor lectin kinase" [	0.614	0.641	0.423	3.3e-117
TAIR|locus:2099941	684	AT3G55550 [Arabidopsis thalian	0.607	0.625	0.437	1.4e-116
TAIR|locus:2149795	688	LECRKA4.2 "lectin receptor kin	0.849	0.870	0.377	3.8e-101
TAIR|locus:2149810	691	LECRKA4.3 "lectin receptor kin	0.828	0.845	0.369	3.2e-97
TAIR|locus:2168509	674	AT5G59260 [Arabidopsis thalian	0.824	0.862	0.372	3.7e-96
TAIR|locus:2097613	693	AT3G08870 [Arabidopsis thalian	0.831	0.845	0.371	2.6e-95
TAIR|locus:2080407	626	AT3G59750 [Arabidopsis thalian	0.585	0.659	0.387	1.6e-94
TAIR|locus:2097533	659	AT3G59740 [Arabidopsis thalian	0.753	0.805	0.380	9e-93
TAIR|locus:2083986	715	AT3G53380 [Arabidopsis thalian	0.478	0.471	0.407	3.3e-91

TAIR|locus:2138381 AT4G04960 [Arabidopsis thaliana (taxid:3702)]

 Score = 1965 (696.8 bits), Expect = 4.4e-203, P = 4.4e-203
 Identities = 404/688 (58%), Positives = 485/688 (70%)

Query:    25 AVDFVFNGFN--SSNLSLYGTATVESRILTLTNSTTFTIGRALYPSKIPTKRPNSSYVYP 82
             A+DF+FNGFN  SSN+SL+G AT+ES+ILTLTN T+F  GRALY   I TK P +S V P
Sbjct:    20 AIDFIFNGFNDSSSNVSLFGIATIESKILTLTNQTSFATGRALYNRTIRTKDPITSSVLP 79

Query:    83 FSTSFIFAMAPYKGVLAGHGLVFLFVPFHGIKGATEAQHLGLFNRTNDGNSSNHVFGVEF 142
             FSTSFIF MAPYK  L GHG+VFLF P  GI G++ AQHLGLFN TN+GN SNH+FGVEF
Sbjct:    80 FSTSFIFTMAPYKNTLPGHGIVFLFAPSTGINGSSSAQHLGLFNLTNNGNPSNHIFGVEF 139

Query:   143 DVFKNQEFNDIDENHVGIDVNSLTSVSAHAAGYWPDNQXXXXXXXXXXXXXXXEKSFKEL 202
             DVF NQEF+DID NHVGIDVNSL SV ++ +GYW D+                   FK L
Sbjct:   140 DVFANQEFSDIDANHVGIDVNSLHSVYSNTSGYWSDDGVV----------------FKPL 183

Query:   203 KLNNGKNYQVWIDYADSFINITMVEAGMKRPKRPLLSVPLNLSGVLEDEMYVGFTAATGQ 262
             KLN+G+NYQVWIDY D  +N+TM  AG  RPK PLLS  LNLS V+EDEM+VGFTAATG+
Sbjct:   184 KLNDGRNYQVWIDYRDFVVNVTMQVAGKIRPKIPLLSTSLNLSDVVEDEMFVGFTAATGR 243

Query:   263 LVESHKILAWSFSNTKFSLSEELITSGLPSFVLPKDSIFKSKGFIAGVTVGGLFIIVAVV 322
             LV+SHKILAWSFSN+ FSLS  LIT+GLPSFVLPKDSI K+K F+  V V   F++VA+V
Sbjct:   244 LVQSHKILAWSFSNSNFSLSNSLITTGLPSFVLPKDSIVKAKWFVF-VLVLICFLVVALV 302

Query:   323 LCSLF-LIKXXXXXXXXXXXXXXXXXXYWPHRITYQEIEAATKGFSEEXXXXXXXXXXXX 381
                LF +++                  YWPHRI Y+EIE+ TKGF E+            
Sbjct:   303 GLVLFAVVRKRLERARKRALMEDWEMEYWPHRIPYEEIESGTKGFDEKNVIGIGGNGKVY 362

Query:   382 XXXLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVY 441
                L+GG  E+AVKRIS E+  G R F+AEISSLGRLKH++LV LRGWCK+E GS MLVY
Sbjct:   363 KGLLQGGVVEVAVKRISQESSDGMREFVAEISSLGRLKHRNLVSLRGWCKKEVGSFMLVY 422

Query:   442 DYMENGSLDKWIFQCDGSMM-LSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVL 500
             DYMENGSLD+WIF+ D  +  LSCEERIR+LK VA+G+LYLHEGWE KVLHRDIK+SNVL
Sbjct:   423 DYMENGSLDRWIFENDEKITTLSCEERIRILKGVASGILYLHEGWESKVLHRDIKASNVL 482

Query:   501 LDKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILIL 560
             LD++M  RL DFGLAR+HGH Q   TTRVVGT GYLAPEV  +GRASTQTDVF +GIL+L
Sbjct:   483 LDRDMIPRLSDFGLARVHGHEQPVRTTRVVGTAGYLAPEVVKTGRASTQTDVFAYGILVL 542

Query:   561 EVLSGRRPIEEGKPNLVEMVWELMVQGKXXXXXXXXXXXKGGFDE--DEVERVLHLGLLC 618
             EV+ GRRPIEEGK  L++ VW LM +G+             G  E  DE ERVL LGLLC
Sbjct:   543 EVMCGRRPIEEGKKPLMDWVWGLMERGEILNGLDPQMMMTQGVTEVIDEAERVLQLGLLC 602

Query:   619 AYPDPRARPTMRQVVKVLEG-KIEAGIENETEDMDAYLLQQVKSKDMWANYSRSFGYGYA 677
             A+PDP  RP+MRQVV+V EG K E      +ED+++++L ++ S+      SR F YG +
Sbjct:   603 AHPDPAKRPSMRQVVQVFEGDKAEIFEAESSEDVESWMLMKMGSRGS----SREFWYGSS 658

Query:   678 THPTFHDIRQXXXXXXXXXXXNTIMEGR 705
             +HPT   IR            ++I+EGR
Sbjct:   659 SHPTIEQIRLQSLSVSLSSWNSSILEGR 686

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

TAIR|locus:2040681 RLK "receptor lectin kinase" [Arabidopsis thaliana (taxid:3702)]

 Score = 842 (301.5 bits), Expect = 3.3e-117, Sum P(2) = 3.3e-117
 Identities = 191/451 (42%), Positives = 268/451 (59%)

Query:   196 EKS-FKELKLNNGKNYQVWIDY--ADSFINITMVEAGMKRPKRPLLSVPLNLSGVLEDEM 252
             EK  FK L L + K  QVW+DY    + I++TM      +P RPL++   +LS VL  +M
Sbjct:   180 EKGQFKNLTLISRKPMQVWVDYDGRTNKIDVTMAPFNEDKPTRPLVTAVRDLSSVLLQDM 239

Query:   253 YVGFTAATGQLVESHKILAWSFS-NTKFSLSEELITSGLPSFVLPKDSIFK-SKGFIAGV 310
             YVGF++ATG ++  H IL WSF  N K   +  L  S LP   LP+    + S+ +  G+
Sbjct:   240 YVGFSSATGSVLSEHYILGWSFGLNEK---APPLALSRLPK--LPRFEPKRISEFYKIGM 294

Query:   311 TVGGLFIIVAVVLCSLFLIKXXXXXXXXXXXXXXXXXXYWPHRITYQEIEAATKGFSEEX 370
              +  LF+I + +    ++++                  +  +R  ++++  ATKGF E+ 
Sbjct:   295 PLISLFLIFSFIFLVCYIVRRRRKFAEELEEWEKE---FGKNRFRFKDLYYATKGFKEKG 351

Query:   371 XXXXXXXXXXXXXXLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWC 430
                           + G   EIAVKR+SHE+  G + F+AEI S+GR+ H++LV L G+C
Sbjct:   352 LLGTGGFGSVYKGVMPGTKLEIAVKRVSHESRQGMKEFVAEIVSIGRMSHRNLVPLLGYC 411

Query:   431 KREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVL 490
             +R +G L+LVYDYM NGSLDK+++     + L+ ++RI+V+  VA+G+ YLHE WE+ V+
Sbjct:   412 RR-RGELLLVYDYMPNGSLDKYLYNTP-EVTLNWKQRIKVILGVASGLFYLHEEWEQVVI 469

Query:   491 HRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQT 550
             HRD+K+SNVLLD E+NGRLGDFGLAR++ HG    TT VVGT+GYLAPE   +GRA+  T
Sbjct:   470 HRDVKASNVLLDGELNGRLGDFGLARLYDHGSDPQTTHVVGTLGYLAPEHTRTGRATMAT 529

Query:   551 DVFGFGILILEVLSGRRPIE---EGKPNLVEMVWELMVQGKXXXXXXXXXXXKGGFDEDE 607
             DVF FG  +LEV  GRRPIE   E     + + W   +  K               DE E
Sbjct:   530 DVFAFGAFLLEVACGRRPIEFQQETDETFLLVDWVFGLWNKGDILAAKDPNMGSECDEKE 589

Query:   608 VERVLHLGLLCAYPDPRARPTMRQVVKVLEG 638
             VE VL LGLLC++ DPRARP+MRQV+  L G
Sbjct:   590 VEMVLKLGLLCSHSDPRARPSMRQVLHYLRG 620

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0009751 "response to salicylic acid stimulus" evidence=IEP

GO:0000165 "MAPK cascade" evidence=RCA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=RCA

GO:0006612 "protein targeting to membrane" evidence=RCA

GO:0006995 "cellular response to nitrogen starvation" evidence=RCA

GO:0009617 "response to bacterium" evidence=RCA

GO:0009627 "systemic acquired resistance" evidence=RCA

GO:0009697 "salicylic acid biosynthetic process" evidence=RCA

GO:0009862 "systemic acquired resistance, salicylic acid mediated signaling pathway" evidence=RCA

GO:0009867 "jasmonic acid mediated signaling pathway" evidence=RCA

GO:0010310 "regulation of hydrogen peroxide metabolic process" evidence=RCA

GO:0010363 "regulation of plant-type hypersensitive response" evidence=RCA

GO:0031347 "regulation of defense response" evidence=RCA

GO:0031348 "negative regulation of defense response" evidence=RCA

GO:0035304 "regulation of protein dephosphorylation" evidence=RCA

GO:0042742 "defense response to bacterium" evidence=RCA

GO:0043069 "negative regulation of programmed cell death" evidence=RCA

GO:0045088 "regulation of innate immune response" evidence=RCA

GO:0050832 "defense response to fungus" evidence=RCA

TAIR|locus:2099941 AT3G55550 [Arabidopsis thaliana (taxid:3702)]

 Score = 892 (319.1 bits), Expect = 1.4e-116, Sum P(2) = 1.4e-116
 Identities = 195/446 (43%), Positives = 271/446 (60%)

Query:   200 KELKLNNGKNYQVWIDYADSFINITM-VEAGMKRPKRPLLSVPLNLSGVLEDEMYVGFTA 258
             KEL L+ G+  Q WIDY  +   + + +    ++PK  LLS  ++LS VL DEMYVGF+A
Sbjct:   183 KELFLDGGRVIQAWIDYDSNKKRLDVKLSPFSEKPKLSLLSYDVDLSSVLGDEMYVGFSA 242

Query:   259 ATGQLVESHKILAWSF--SNTKFSLSEELITSGLPSFVLPKDSIFKSKGFIAGVTV-GGL 315
             +TG L  SH IL W+F  S   FSLS   +   +PS +  +    K +  I GV++   L
Sbjct:   243 STGLLASSHYILGWNFNMSGEAFSLSLPSLPR-IPSSIKKRKK--KRQSLILGVSLLCSL 299

Query:   316 FIIVAVVLCSLFLIKXXXXXXXXXXXXXXXXXXYWPHRITYQEIEAATKGFSEEXXXXXX 375
              I   +V  SLF+++                  + PHR +Y+E++ AT GF ++      
Sbjct:   300 LIFAVLVAASLFVVRKVKDEDRVEEWELD----FGPHRFSYRELKKATNGFGDKELLGSG 355

Query:   376 XXXXXXXXXLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKG 435
                      L G    +AVKRISHE+  G R F++E+SS+G L+H++LV L GWC+R + 
Sbjct:   356 GFGKVYKGKLPGSDEFVAVKRISHESRQGVREFMSEVSSIGHLRHRNLVQLLGWCRR-RD 414

Query:   436 SLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIK 495
              L+LVYD+M NGSLD ++F  +  ++L+ ++R +++K VA+G+LYLHEGWE+ V+HRDIK
Sbjct:   415 DLLLVYDFMPNGSLDMYLFDENPEVILTWKQRFKIIKGVASGLLYLHEGWEQTVIHRDIK 474

Query:   496 SSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGF 555
             ++NVLLD EMNGR+GDFGLA+++ HG     TRVVGT GYLAPE+  SG+ +T TDV+ F
Sbjct:   475 AANVLLDSEMNGRVGDFGLAKLYEHGSDPGATRVVGTFGYLAPELTKSGKLTTSTDVYAF 534

Query:   556 GILILEVLSGRRPIEEGK-PN---LVEMVWELMVQGKXXXXXXXXXXXKGGFDEDEVERV 611
             G ++LEV  GRRPIE    P    +V+ VW     G             G FDE+EV  V
Sbjct:   535 GAVLLEVACGRRPIETSALPEELVMVDWVWSRWQSGDIRDVVDRRL--NGEFDEEEVVMV 592

Query:   612 LHLGLLCAYPDPRARPTMRQVVKVLE 637
             + LGLLC+   P  RPTMRQVV  LE
Sbjct:   593 IKLGLLCSNNSPEVRPTMRQVVMYLE 618

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

TAIR|locus:2149795 LECRKA4.2 "lectin receptor kinase a4.1" [Arabidopsis thaliana (taxid:3702)]

 Score = 1003 (358.1 bits), Expect = 3.8e-101, P = 3.8e-101
 Identities = 242/641 (37%), Positives = 357/641 (55%)

Query:    27 DFVFNGF--NSSNLSLYGTATVE-SRILTLTNSTTFTIGRALYPSKIPTKRPNSSY---- 79
             +F+F GF  N SN+   G AT++   +L LT+  +   G + Y   +     N+S     
Sbjct:    25 EFIFRGFSGNQSNIVTTGAATIKLDGLLRLTDRNSNVTGTSFYHKPVRLLETNTSSTNST 84

Query:    80 VYPFSTSFIFAMAPYKGVLAGHGLVFLFVPFHGIKGATEAQHLGLFNRTNDGNSSNHVFG 139
             +  FSTSF+F + P      G G  F   P     GA  AQ+LGL N+ NDGNS+NHVF 
Sbjct:    85 IRSFSTSFVFVIIPTSSSNGGFGFTFTLSPTPDRTGAESAQYLGLLNKANDGNSTNHVFA 144

Query:   140 VEFDVFKN-QEFNDIDENHVGIDVNSLTSVSAHAAGYWPDNQXXXXXXXXXXXXXXXEKS 198
             VEFD  +  ++  D   NH+G++ NSLTS       Y+ DN+               + +
Sbjct:   145 VEFDTVQGFKDGADRTGNHIGLNFNSLTSDVQEPVVYY-DNE---------------DPN 188

Query:   199 FKE-LKLNNGKNYQVWIDY--ADSFINITMVEAGMK-RPKRPLLSVPL-NLSGVLEDEMY 253
              KE   L +G   +  +DY      +N+T+  A +K RP RPL+S P+  LS ++++EMY
Sbjct:   189 RKEDFPLQSGDPIRAILDYDGPTQTLNLTVYPANLKSRPVRPLISRPVPKLSQIVQEEMY 248

Query:   254 VGFTAATGQLVES-HKILAWSFSNTKFSLSEELITSGLPSFVLPKDSIFKSKGFIAGVT- 311
             VGFTAATG+   S H ++ WSFS+    L+E+  T  L     P  +  K +G+ + V  
Sbjct:   249 VGFTAATGRDQSSAHYVMGWSFSSGGDLLTED--TLDLLELPRPPPNTAKKRGYNSQVLA 306

Query:   312 -VGGLFIIVAVVLCSLFLIKXXXXXXXXXXXXXXXXXXYWPHRITYQEIEAATKGFSEEX 370
              +  L  +  ++L  LF                     + PHR+ Y+++ AAT GF E  
Sbjct:   307 LIVALSGVTVILLALLFFFVMYKKRLQQGEVLEDWEINH-PHRLRYKDLYAATDGFKENR 365

Query:   371 XXXXXXXXXXXXXXLEGGGAE-IAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGW 429
                           L    ++ IAVK+I+  +  G R F+AEI SLGRL+HK+LV L+GW
Sbjct:   366 IVGTGGFGTVFRGNLSSPSSDQIAVKKITPNSMQGVREFIAEIESLGRLRHKNLVNLQGW 425

Query:   430 CKREKGSLMLVYDYMENGSLDKWIFQC--DGSMMLSCEERIRVLKDVAAGVLYLHEGWEK 487
             CK +K  L+L+YDY+ NGSLD  ++       ++LS   R ++ K +A+G+LYLHE WEK
Sbjct:   426 CK-QKNDLLLIYDYIPNGSLDSLLYSRPRQSGVVLSWNARFKIAKGIASGLLYLHEEWEK 484

Query:   488 KVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRAS 547
              V+HRDIK SNVL++ +MN RLGDFGLAR++  G  ++TT VVGT+GY+APE+  +G++S
Sbjct:   485 VVIHRDIKPSNVLIEDDMNPRLGDFGLARLYERGSQSNTTVVVGTIGYMAPELARNGKSS 544

Query:   548 TQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKXXXXXXXXXXXKGGFDEDE 607
             + +DVF FG+L+LE++SGRRP + G   L + V EL  +G+             G+D  E
Sbjct:   545 SASDVFAFGVLLLEIVSGRRPTDSGTFFLADWVMELHARGEILHAVDPRLGF--GYDGVE 602

Query:   608 VERVLHLGLLCAYPDPRARPTMRQVVKVLEGKIEAG-IENE 647
                 L +GLLC +  P +RP+MR V++ L G  +   I+N+
Sbjct:   603 ARLALVVGLLCCHQRPTSRPSMRTVLRYLNGDDDVPEIDND 643

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0009738 "abscisic acid mediated signaling pathway" evidence=IMP

GO:0009845 "seed germination" evidence=IMP

GO:0010200 "response to chitin" evidence=RCA

TAIR|locus:2149810 LECRKA4.3 "lectin receptor kinase a4.3" [Arabidopsis thaliana (taxid:3702)]

 Score = 966 (345.1 bits), Expect = 3.2e-97, P = 3.2e-97
 Identities = 233/630 (36%), Positives = 345/630 (54%)

Query:    27 DFVFNGF--NSSNLSLYGTATVESR-ILTLTNSTTFTIGRALY--PSKIPTKRPNSSYVY 81
             +F+F+GF  N S + + G +T+ S  +L LT+  +  +G A Y  P ++      ++ V 
Sbjct:    29 EFIFHGFKGNQSEIHMQGDSTITSNGLLRLTDRNSDVVGTAFYHKPVRLLDSNSTNTTVR 88

Query:    82 PFSTSFIFAMAPYKGVLAGHGLVFLFVPFHGIKGATEAQHLGLFNRTNDGNSSNHVFGVE 141
              FSTSFIF +        G G  F   P      A   Q++GL N  NDGNSSNHVF VE
Sbjct:    89 SFSTSFIFIIPSSSTSNGGFGFTFTLSPTPNRTDADPEQYMGLLNERNDGNSSNHVFAVE 148

Query:   142 FDVFKNQEFNDIDE---NHVGIDVNSLTSVSAHAAGYWPDNQXXXXXXXXXXXXXXXEKS 198
             FD    Q F D      NH+G++ NSL+S       Y+ +N                +K 
Sbjct:   149 FDTV--QGFKDGTNRIGNHIGLNFNSLSSDVQEPVAYFNNNDS--------------QK- 191

Query:   199 FKELKLNNGKNYQVWIDY--ADSFINITMVEAGMK-RPKRPLLS--VPLNLSGVLEDEMY 253
              +E +L +G+  QV++DY      +N+T+    +  +P+ PL+S  VP  LS ++ DEM+
Sbjct:   192 -EEFQLVSGEPIQVFLDYHGPTKTLNLTVYPTRLGYKPRIPLISREVP-KLSDIVVDEMF 249

Query:   254 VGFTAATGQLVES--HKILAWSF-SNTKFSLSEELITSGLPSFVLPKDSIFKSKGFIAGV 310
             VGFTAATG+  +S  H ++ WSF S  +  L+  L  S LP    P  +  K +G+   V
Sbjct:   250 VGFTAATGRHGQSSAHYVMGWSFASGGEHPLAAMLDISQLPP---PPPNKAKKRGYNGKV 306

Query:   311 T--VGGLFIIVAVVLCSLFLIKXXXXXXXXXXXXXXXXXXYWPHRITYQEIEAATKGFSE 368
                +  L  +++++L  LFL                    + PHR  Y+++  AT+GF E
Sbjct:   307 IALIVALSTVISIMLVLLFLFMMYKKRMQQEEILEDWEIDH-PHRFRYRDLYKATEGFKE 365

Query:   369 EXXXXXXXXXXXXXXXLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRG 428
                             +     +IAVK+I+  +  G R F+AEI SLGRL+HK+LV L+G
Sbjct:   366 NRVVGTGGFGIVYRGNIRSSSDQIAVKKITPNSMQGVREFVAEIESLGRLRHKNLVNLQG 425

Query:   429 WCKREKGSLMLVYDYMENGSLDKWIFQCD--GSMMLSCEERIRVLKDVAAGVLYLHEGWE 486
             WCK  +  L+L+YDY+ NGSLD  ++        +LS   R ++ K +A+G+LYLHE WE
Sbjct:   426 WCKH-RNDLLLIYDYIPNGSLDSLLYSKPRRSGAVLSWNARFQIAKGIASGLLYLHEEWE 484

Query:   487 KKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRA 546
             + V+HRD+K SNVL+D +MN RLGDFGLAR++  G  + TT VVGT+GY+APE+  +G +
Sbjct:   485 QIVIHRDVKPSNVLIDSDMNPRLGDFGLARLYERGSQSCTTVVVGTIGYMAPELARNGNS 544

Query:   547 STQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKXXXXXXXXXXXKGGFDED 606
             S+ +DVF FG+L+LE++SGR+P + G   + + V EL   G+             G+DE 
Sbjct:   545 SSASDVFAFGVLLLEIVSGRKPTDSGTFFIADWVMELQASGEILSAIDPRLGS--GYDEG 602

Query:   607 EVERVLHLGLLCAYPDPRARPTMRQVVKVL 636
             E    L +GLLC +  P +RP MR V++ L
Sbjct:   603 EARLALAVGLLCCHHKPESRPLMRMVLRYL 632

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0009738 "abscisic acid mediated signaling pathway" evidence=IMP

GO:0009845 "seed germination" evidence=IMP

TAIR|locus:2168509 AT5G59260 [Arabidopsis thaliana (taxid:3702)]

 Score = 956 (341.6 bits), Expect = 3.7e-96, P = 3.7e-96
 Identities = 235/631 (37%), Positives = 341/631 (54%)

Query:    28 FVFNGFNSSNLSLYGTATVESRILTLTNSTTFTIGRALYPSKIPTKRPNSSYV-YPFSTS 86
             FV+  F +++L L G A      L LTN+T    G A Y   IP K   SS   + FST 
Sbjct:    30 FVYYDFRNADLELDGMANTNHGPLHLTNNTNTGTGHAFY--NIPIKFTASSLSSFSFSTE 87

Query:    87 FIFAMAPYKGVLAGHGLVFLFVPFHGIKGATEAQ-HLGLFNRTNDGNSSNHVFGVEFDVF 145
             F+FA+ P +    GHG+ F+  P   ++    A  +LG+FNR ND  ++ H+F VE D  
Sbjct:    88 FVFAIFPLQKSTYGHGMAFVVSPTKDLRSNGSANSNLGIFNRANDNKTATHIFAVELDTN 147

Query:   146 KNQEFNDIDENHVGIDVNSLTSVSAHAAGYWPDNQXXXXXXXXXXXXXXXEKSFKELKLN 205
             +N E  D   N VGID+NS+ SV +  A Y+   +                K+   L L 
Sbjct:   148 QNSESFDKGGNDVGIDINSIVSVESADASYFNARKG---------------KNIS-LPLA 191

Query:   206 NGKNYQVWIDY--ADSFINITMVE-----------AGMKRPKRPLLSVPLNLSGVLEDEM 252
             +GK+  VWIDY   +  +N+T+             +   +PK PLLS  +NLS +  + M
Sbjct:   192 SGKSILVWIDYDGIEKVLNVTLAPVQTPKPDSPYFSSFIKPKVPLLSRSINLSEIFTETM 251

Query:   253 YVGFTAATGQLVESHKILAWSFSNTKFSLSEELITSGLPSFVLPKDSIFKSKGFIAGVTV 312
             YVGF+ +TG +  +  IL WSF       +E L  S L S   P    F  K  + G T+
Sbjct:   252 YVGFSGSTGSIKSNQYILGWSFKQG--GKAESLDISRL-SNPPPSPKRFPLKE-VLGATI 307

Query:   313 GGL-FIIVAVVLCSLFLIKXXXXXXXXXXXXXXXXXXYWPHRITYQEIEAATKGFSEEXX 371
               + F+ +  ++   +L K                  Y P R +++ +  ATKGF E   
Sbjct:   308 STIAFLTLGGIV---YLYKKKKYAEVLEQWEKE----YSPQRYSFRILYKATKGFRENQL 360

Query:   372 XXXXXXXXXXXXXLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCK 431
                          L  G  +IAVKR+ H+ + G + ++AEI+S+GRL+HK+LV L G+C+
Sbjct:   361 LGAGGFGKVYKGILPSG-TQIAVKRVYHDAEQGMKQYVAEIASMGRLRHKNLVHLLGYCR 419

Query:   432 REKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLH 491
             R KG L+LVYDYM NGSLD ++F  +    L+  +R+ ++K VA+ +LYLHE WE+ VLH
Sbjct:   420 R-KGELLLVYDYMPNGSLDDYLFHKNKLKDLTWSQRVNIIKGVASALLYLHEEWEQVVLH 478

Query:   492 RDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTD 551
             RDIK+SN+LLD ++NG+LGDFGLAR H  G     TRVVGT+GY+APE+ + G  +T TD
Sbjct:   479 RDIKASNILLDADLNGKLGDFGLARFHDRGVNLEATRVVGTIGYMAPELTAMGVTTTCTD 538

Query:   552 VFGFGILILEVLSGRRPIEEGKPN--LVEMVWELMVQGKXXXXXXXXXXXKGGFDEDEVE 609
             V+ FG  ILEV+ GRRP++   P   ++ + W     GK              F  +E +
Sbjct:   539 VYAFGAFILEVVCGRRPVDPDAPREQVILVKWVASC-GKRDALTDTVDSKLIDFKVEEAK 597

Query:   610 RVLHLGLLCAYPDPRARPTMRQVVKVLEGKI 640
              +L LG+LC+  +P  RP+MRQ+++ LEG +
Sbjct:   598 LLLKLGMLCSQINPENRPSMRQILQYLEGNV 628

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

TAIR|locus:2097613 AT3G08870 [Arabidopsis thaliana (taxid:3702)]

 Score = 948 (338.8 bits), Expect = 2.6e-95, P = 2.6e-95
 Identities = 234/630 (37%), Positives = 344/630 (54%)

Query:    28 FVFNGF--NSSNLSLYGTATVE--SRILTLTNSTTFTIGRALYPSKIPTKR-PNSS--YV 80
             F F GF  N +++   G +T++  + +L LTN      G A Y   I  +   NSS   V
Sbjct:    36 FTFIGFKENQTDIQTEGASTIQHDNDLLRLTNRKQNVTGTAFYRKPIRLRELTNSSDIKV 95

Query:    81 YPFSTSFIFAMAPYKGVLAGHGLVFLFVPFHGIKGATEAQHLGLFNRTNDGNSSNHVFGV 140
               FSTSF+F + P      G G  F   P     GA  AQ+LGL NRTN+GN SNHVF V
Sbjct:    96 CSFSTSFVFVILPSSPGNGGFGFTFTLSPTPNRPGAESAQYLGLLNRTNNGNPSNHVFAV 155

Query:   141 EFDVFKN-QEFNDIDENHVGIDVNSLTSVSAHAAGYWPDNQXXXXXXXXXXXXXXXEKSF 199
             EFD  +  ++  D   NH+G++ N+L+S       Y+                   E   
Sbjct:   156 EFDTVQGFKDGADRRGNHIGLNFNNLSSNVQEPLIYYD-----------------TEDRK 198

Query:   200 KELKLNNGKNYQVWIDYADSF--INITMVEAGMK-RPKRPLLSVPLN-LSGVLEDEMYVG 255
             ++ +L +G+  +V IDY  S   +N+T+    ++ +PK+PL+S  ++ LS +++DEMYVG
Sbjct:   199 EDFQLESGEPIRVLIDYDGSSETLNVTIYPTRLEFKPKKPLISRRVSELSEIVKDEMYVG 258

Query:   256 FTAATGQLVES-HKILAWSFSNT-KFSLSEELITSGLPSFVLPKDSIFKSKGFIAGVTV- 312
             FTAATG+   S H ++ WSFS+  +  +++ L  S LP    P   +   KG+ + V V 
Sbjct:   259 FTAATGKDQSSAHYVMGWSFSSCGENPMADWLEISRLP----PPPRLSNKKGYNSQVIVL 314

Query:   313 -GGLFIIVAVVLCSLFLIKXXXXXXXXXXXXXXXXXXYWPHRITYQEIEAATKGFSEEXX 371
                L I+  V+L  LF+                    Y PHR  Y+++  ATK F E   
Sbjct:   315 IVALSIVTLVLLVLLFIFVMYKRRIQEEDTLEDWEIDY-PHRFRYRDLYLATKKFKESEI 373

Query:   372 XXXXXXXXXXXXXLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCK 431
                          L   G  IAVK+I+  +  G R F+AEI SLGRL HK+LV L+GWCK
Sbjct:   374 IGTGGFGIVYRGNLSSSGP-IAVKKITSNSLQGVREFMAEIESLGRLGHKNLVNLQGWCK 432

Query:   432 REKGSLMLVYDYMENGSLDKWIFQCD--GSMMLSCEERIRVLKDVAAGVLYLHEGWEKKV 489
               K  L+L+YDY+ NGSLD  ++Q      ++L  + R  ++K +A+G+LYLHE WE+ V
Sbjct:   433 H-KNELLLIYDYIPNGSLDSLLYQTPRRNGIVLPWDVRFEIIKGIASGLLYLHEEWEQIV 491

Query:   490 LHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQ 549
             +HRD+K SNVL+D++MN +LGDFGLAR++  G +  TT++VGT+GY+APE+  +G+ ST 
Sbjct:   492 VHRDVKPSNVLIDEDMNAKLGDFGLARLYERGTLTQTTKIVGTLGYMAPELTRNGKGSTA 551

Query:   550 TDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKXXXXXXXXXXXKGGFDEDEVE 609
             +DVF FG+L+LE++ G +P       L + V E    G               F+  E +
Sbjct:   552 SDVFAFGVLLLEIVCGNKPTNAENFFLADWVMEFHTNGGILCVVDQNLGSS--FNGREAK 609

Query:   610 RVLHLGLLCAYPDPRARPTMRQVVKVLEGK 639
               L +GLLC +  P+ RP+MR V++ L G+
Sbjct:   610 LALVVGLLCCHQKPKFRPSMRMVLRYLNGE 639

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

TAIR|locus:2080407 AT3G59750 [Arabidopsis thaliana (taxid:3702)]

 Score = 728 (261.3 bits), Expect = 1.6e-94, Sum P(2) = 1.6e-94
 Identities = 167/431 (38%), Positives = 250/431 (58%)

Query:   216 YADSFINITMVEAGMK-RPKRPLLSVPLNLSGVLEDEMYVGFTAATGQLVESHKILAWSF 274
             + D  +N+T+  A +   P++PLLS+  +LS    +EMY G+TA+TG +   H +L+ S+
Sbjct:   156 HPDQQLNVTLFPAEIPVPPRKPLLSLNRDLSPYFLEEMYYGYTASTGSIGAFHYMLS-SY 214

Query:   275 SNTKFSLS--EELITSGLPSFVLPKDSIFKSKGFIAG-VTVGGLFIIVAVVLCSLFLIKX 331
             +  K      E ++   LP +  PK S  ++K  +A  +T+    + VA  +C +F  + 
Sbjct:   215 ATPKVENPTWEFIVVPTLPPY--PKKSSDRTKKILAVCLTLAVFAVFVASGICFVFYTRH 272

Query:   332 XXXXXXXXXXXXXXXXXYWPHRITYQEIEAATKGFSEEXXXXXXXXXXXXXXXLEGGGAE 391
                              Y PHR  Y+E+  ATK F E+               L G  AE
Sbjct:   273 KKVKEVLEEWEIQ----YGPHRFAYKELLNATKDFKEKQLLGKGGFGQVFKGTLPGSNAE 328

Query:   392 IAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDK 451
             IAVKR SH++  G   FLAEIS++GRL+H +LV L G+C R K +L LVYD+  NGSLDK
Sbjct:   329 IAVKRTSHDSRQGMSEFLAEISTIGRLRHPNLVRLLGYC-RHKENLYLVYDFTPNGSLDK 387

Query:   452 WIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGD 511
             ++ + +    L+ E+R +++KDVA+ +L+LH+ W + ++HRDIK +NVL+D EMN R+GD
Sbjct:   388 YLDRNENQERLTWEQRFKIIKDVASALLHLHQEWVQIIIHRDIKPANVLIDHEMNARIGD 447

Query:   512 FGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEE 571
             FGLA+++  G    T+RV GT GY+APE+  +GRA+T TDV+ FG+++LEV+ GRR IE 
Sbjct:   448 FGLAKLYDQGLDPQTSRVAGTFGYIAPELLRTGRATTSTDVYAFGLVMLEVVCGRRMIER 507

Query:   572 GKPN----LVEMVWELMVQGKXXXXXXXXXXXKGGFDEDEVERVLHLGLLCAYPDPRARP 627
               P     LV+ + EL   GK           +   +  E+E +L LGLLCA+     RP
Sbjct:   508 RAPENEEVLVDWILELWESGKLFDAAEESIRQEQ--NRGEIELLLKLGLLCAHHTELIRP 565

Query:   628 TMRQVVKVLEG 638
              M  V+++L G
Sbjct:   566 NMSAVMQILNG 576

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

TAIR|locus:2097533 AT3G59740 [Arabidopsis thaliana (taxid:3702)]

 Score = 924 (330.3 bits), Expect = 9.0e-93, P = 9.0e-93
 Identities = 216/568 (38%), Positives = 331/568 (58%)

Query:    83 FSTSFIFAMAPYKGVLAGHGLVFLFVPFHGIKGATEAQHLGLFNRTNDGNSSNHVFGVEF 142
             FS + IF + P       HG+ F+F P  G+ GA+  Q+LG+FN TN+G +SN+V  +E 
Sbjct:    67 FSFNIIFGIVPEHKQQGSHGMAFVFSPTRGLPGASPDQYLGIFNETNNGKASNNVIAIEL 126

Query:   143 DVFKNQEFNDIDENHVGIDVNSLTSVSAHAAGYWPDNQXXXXXXXXXXXXXXXEKSFKEL 202
             D+ K++EF DID+NHVGI++N LTSV++ +AGY+ D                 + +FK+L
Sbjct:   127 DIRKDEEFGDIDDNHVGININGLTSVASASAGYYDDE----------------DGNFKKL 170

Query:   203 KLNNGKNYQVWIDYA--DSFINITMVEAGMK-RPKRPLLSVPLNLSGVLEDEMYVGFTAA 259
              L + K  ++ I Y+  D  +N+T++ A +   P++ LLS+  +LS    +E Y+GFTA+
Sbjct:   171 SLISTKVMRLSIVYSHTDKQLNVTLLPAEISVPPQKSLLSLNRDLSPYFLEETYLGFTAS 230

Query:   260 TGQLVESHKILAWSFSNTKFSLSEEL-ITSGLPSFVLPKDSIFKSKGFIAG-VTVGGLFI 317
             TG +   + ++ +S+       + +L +   LP +  PK S  +++  +A  +T+     
Sbjct:   231 TGSIGALYYVMQFSYEEGVIYPAWDLGVIPTLPPY--PKKSYDRTRRILAVCLTLAVFTA 288

Query:   318 IVAVVLCSLFLIKXXXXXXXXXXXXXXXXXXYWPHRITYQEIEAATKGFSEEXXXXXXXX 377
             +VA  +  +F ++                    PHR +Y+E+  ATKGF E+        
Sbjct:   289 LVASGIGFVFYVRHKKVKEVLEEWEIQNG----PHRFSYKELFNATKGFKEKQLLGKGGF 344

Query:   378 XXXXXXXLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSL 437
                    L G  AEIAVKR SH++  G   FLAEIS++GRL+H +LV L G+CK  K +L
Sbjct:   345 GQVYKGMLPGSDAEIAVKRTSHDSRQGMSEFLAEISTIGRLRHPNLVRLLGYCKH-KENL 403

Query:   438 MLVYDYMENGSLDKWIFQC---DGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDI 494
              LVYD+M NGSLD+ + +    +    L+ E+R +++KDVA  +L+LH+ W + ++HRDI
Sbjct:   404 YLVYDFMPNGSLDRCLTRSNTNENQERLTWEQRFKIIKDVATALLHLHQEWVQVIVHRDI 463

Query:   495 KSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFG 554
             K +NVLLD  MN RLGDFGLA+++  G    T+RV GT+GY+APE+  +GRA+T TDV+ 
Sbjct:   464 KPANVLLDHGMNARLGDFGLAKLYDQGFDPQTSRVAGTLGYIAPELLRTGRATTSTDVYA 523

Query:   555 FGILILEVLSGRRPIE----EGKPNLVEMVWELMVQGKXXXXXXXXXXXKGGFDEDEVER 610
             FG+++LEV+ GRR IE    E +  LV+ + EL   GK           +   +  E+E 
Sbjct:   524 FGLVMLEVVCGRRLIERRAAENEAVLVDWILELWESGKLFDAAEESIRQEQ--NRGEIEL 581

Query:   611 VLHLGLLCAYPDPRARPTMRQVVKVLEG 638
             VL LGLLCA+     RP M  V+++L G
Sbjct:   582 VLKLGLLCAHHTELIRPNMSAVLQILNG 609

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

TAIR|locus:2083986 AT3G53380 [Arabidopsis thaliana (taxid:3702)]

 Score = 653 (234.9 bits), Expect = 3.3e-91, Sum P(3) = 3.3e-91
 Identities = 144/353 (40%), Positives = 200/353 (56%)

Query:   302 KSKGFIAGVTVGGLFIIVAVVLCSLFLIKXXXXXXXXXXXXXXXXXXYWPHRITYQEIEA 361
             ++ G IAGV   G F + A+   +LF +                     P   +Y+E++A
Sbjct:   313 ENPGTIAGVVTAGAFFL-ALFAGALFWVYSKKFKRVERSDSFASEIIKAPKEFSYKELKA 371

Query:   362 ATKGFSEEXXXXXXXXXXXXXXXLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHK 421
              TK F+E                L   G  +AVKR SH +      FL+E+S +G L+H+
Sbjct:   372 GTKNFNESRIIGHGAFGVVYRGILPETGDIVAVKRCSHSSQDKKNEFLSELSIIGSLRHR 431

Query:   422 SLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYL 481
             +LV L+GWC  EKG ++LVYD M NGSLDK +F+      L  + R ++L  VA+ + YL
Sbjct:   432 NLVRLQGWC-HEKGEILLVYDLMPNGSLDKALFE--SRFTLPWDHRKKILLGVASALAYL 488

Query:   482 HEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVF 541
             H   E +V+HRD+KSSN++LD+  N +LGDFGLAR   H +    T   GT+GYLAPE  
Sbjct:   489 HRECENQVIHRDVKSSNIMLDESFNAKLGDFGLARQIEHDKSPEATVAAGTMGYLAPEYL 548

Query:   542 SSGRASTQTDVFGFGILILEVLSGRRPIEEG----------KPNLVEMVWELMVQGKXXX 591
              +GRAS +TDVF +G ++LEV+SGRRPIE+            PNLVE VW L  +GK   
Sbjct:   549 LTGRASEKTDVFSYGAVVLEVVSGRRPIEKDLNVQRHNVGVNPNLVEWVWGLYKEGKVSA 608

Query:   592 XXXXXXXXKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLEGKIEAGI 644
                     +G FDE E+ RVL +GL C++PDP  RPTMR VV++L G+ +  +
Sbjct:   609 AADSRL--EGKFDEGEMWRVLVVGLACSHPDPAFRPTMRSVVQMLIGEADVPV 659

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0030246 "carbohydrate binding" evidence=ISS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9S9U1	LRK71_ARATH	2, ., 7, ., 1, 1, ., 1	0.6226	0.9404	0.9664	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
4th Layer	2.7.11.1	0.991
3rd Layer	2.7.11	0.976

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	705
pfam00139	231	pfam00139, Lectin_legB, Legume lectin domain	2e-90
cd06899	236	cd06899, lectin_legume_LecRK_Arcelin_ConA, legume	6e-87
pfam00069	260	pfam00069, Pkinase, Protein kinase domain	4e-45
smart00220	254	smart00220, S_TKc, Serine/Threonine protein kinase	3e-44
cd00180	215	cd00180, PKc, Catalytic domain of Protein Kinases	3e-43
smart00219	257	smart00219, TyrKc, Tyrosine kinase, catalytic doma	8e-42
smart00221	258	smart00221, STYKc, Protein kinase; unclassified sp	1e-41
cd00192	262	cd00192, PTKc, Catalytic domain of Protein Tyrosin	9e-39
pfam07714	258	pfam07714, Pkinase_Tyr, Protein tyrosine kinase	2e-38
cd06606	260	cd06606, STKc_MAPKKK, Catalytic domain of the Prot	6e-34
cd06627	254	cd06627, STKc_Cdc7_like, Catalytic domain of Cell	1e-32
cd07840	287	cd07840, STKc_CDK9_like, Catalytic domain of Cycli	6e-32
cd05122	253	cd05122, PKc_STE, Catalytic domain of STE family P	2e-30
cd08215	258	cd08215, STKc_Nek, Catalytic domain of the Protein	3e-30
cd06614	286	cd06614, STKc_PAK, Catalytic domain of the Protein	7e-28
cd05039	256	cd05039, PTKc_Csk_like, Catalytic domain of C-term	8e-28
PLN00113	968	PLN00113, PLN00113, leucine-rich repeat receptor-l	2e-27
cd01951	223	cd01951, lectin_L-type, legume lectins	3e-27
cd05033	266	cd05033, PTKc_EphR, Catalytic domain of Ephrin Rec	4e-27
cd07829	282	cd07829, STKc_CDK_like, Catalytic domain of Cyclin	6e-27
cd06623	264	cd06623, PKc_MAPKK_plant_like, Catalytic domain of	6e-26
cd05063	268	cd05063, PTKc_EphR_A2, Catalytic domain of the Pro	8e-26
cd05038	284	cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domai	3e-25
COG0515	384	COG0515, SPS1, Serine/threonine protein kinase [Ge	9e-25
cd06612	256	cd06612, STKc_MST1_2, Catalytic domain of the Prot	9e-25
cd05082	256	cd05082, PTKc_Csk, Catalytic domain of the Protein	9e-25
cd05065	269	cd05065, PTKc_EphR_B, Catalytic domain of the Prot	2e-24
cd05578	258	cd05578, STKc_Yank1, Catalytic domain of the Prote	3e-24
cd08217	265	cd08217, STKc_Nek2, Catalytic domain of the Protei	1e-23
cd05066	267	cd05066, PTKc_EphR_A, Catalytic domain of the Prot	3e-23
cd08529	256	cd08529, STKc_FA2-like, Catalytic domain of the Pr	4e-23
cd05083	254	cd05083, PTKc_Chk, Catalytic domain of the Protein	5e-23
cd05060	257	cd05060, PTKc_Syk_like, Catalytic domain of Spleen	5e-23
cd07866	311	cd07866, STKc_BUR1, Catalytic domain of the Serine	1e-22
cd06621	287	cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of	1e-22
cd05112	256	cd05112, PTKc_Itk, Catalytic domain of the Protein	3e-22
cd05148	261	cd05148, PTKc_Srm_Brk, Catalytic domain of the Pro	5e-22
cd06605	265	cd06605, PKc_MAPKK, Catalytic domain of the dual-s	6e-22
cd05118	283	cd05118, STKc_CMGC, Catalytic domain of CMGC famil	2e-21
cd05123	250	cd05123, STKc_AGC, Catalytic domain of AGC family	7e-21
cd05048	283	cd05048, PTKc_Ror, Catalytic Domain of the Protein	1e-20
cd05068	261	cd05068, PTKc_Frk_like, Catalytic domain of Fyn-re	3e-20
cd05032	277	cd05032, PTKc_InsR_like, Catalytic domain of Insul	4e-20
cd06626	264	cd06626, STKc_MEKK4, Catalytic domain of the Prote	4e-20
cd05080	283	cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) doma	6e-20
cd07841	298	cd07841, STKc_CDK7, Catalytic domain of the Serine	9e-20
cd06610	267	cd06610, STKc_OSR1_SPAK, Catalytic domain of the P	1e-19
cd05059	256	cd05059, PTKc_Tec_like, Catalytic domain of Tec-li	1e-19
cd05084	252	cd05084, PTKc_Fes, Catalytic domain of the Protein	1e-19
cd07861	285	cd07861, STKc_CDK1_euk, Catalytic domain of the Se	2e-19
cd05041	251	cd05041, PTKc_Fes_like, Catalytic domain of Fes-li	2e-19
cd05067	260	cd05067, PTKc_Lck_Blk, Catalytic domain of the Pro	2e-19
cd05036	277	cd05036, PTKc_ALK_LTK, Catalytic domain of the Pro	4e-19
cd07855	334	cd07855, STKc_ERK5, Catalytic domain of the Serine	6e-19
cd05049	280	cd05049, PTKc_Trk, Catalytic domain of the Protein	6e-19
PLN00034	353	PLN00034, PLN00034, mitogen-activated protein kina	7e-19
cd06632	258	cd06632, STKc_MEKK1_plant, Catalytic domain of the	9e-19
cd05034	261	cd05034, PTKc_Src_like, Catalytic domain of Src ki	1e-18
cd07864	302	cd07864, STKc_CDK12, Catalytic domain of the Serin	1e-18
cd05607	277	cd05607, STKc_GRK7, Catalytic domain of the Protei	2e-18
cd05114	256	cd05114, PTKc_Tec_Rlk, Catalytic domain of the Pro	2e-18
cd07833	288	cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dep	3e-18
cd07836	284	cd07836, STKc_Pho85, Catalytic domain of the Serin	3e-18
cd07835	283	cd07835, STKc_CDK1_like, Catalytic domain of Cycli	3e-18
cd06609	274	cd06609, STKc_MST3_like, Catalytic domain of Mamma	3e-18
cd07845	309	cd07845, STKc_CDK10, Catalytic domain of the Serin	4e-18
cd05064	266	cd05064, PTKc_EphR_A10, Catalytic domain of the Pr	4e-18
cd06629	272	cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain o	6e-18
cd06625	263	cd06625, STKc_MEKK3_like, Catalytic domain of MAP/	6e-18
cd07839	284	cd07839, STKc_CDK5, Catalytic domain of the Serine	6e-18
cd05071	262	cd05071, PTKc_Src, Catalytic domain of the Protein	7e-18
cd05058	262	cd05058, PTKc_Met_Ron, Catalytic domain of the Pro	9e-18
cd06608	275	cd06608, STKc_myosinIII_like, Catalytic domain of	9e-18
cd05052	263	cd05052, PTKc_Abl, Catalytic domain of the Protein	9e-18
cd08221	256	cd08221, STKc_Nek9, Catalytic domain of the Protei	9e-18
cd07865	310	cd07865, STKc_CDK9, Catalytic domain of the Serine	1e-17
cd08225	257	cd08225, STKc_Nek5, Catalytic domain of the Protei	1e-17
cd06647	293	cd06647, STKc_PAK_I, Catalytic domain of the Prote	1e-17
cd05057	279	cd05057, PTKc_EGFR_like, Catalytic domain of Epide	2e-17
cd08220	256	cd08220, STKc_Nek8, Catalytic domain of the Protei	2e-17
cd05070	260	cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Pro	2e-17
cd07872	309	cd07872, STKc_PCTAIRE2, Catalytic domain of the Se	3e-17
cd05113	256	cd05113, PTKc_Btk_Bmx, Catalytic domain of the Pro	3e-17
cd08223	257	cd08223, STKc_Nek4, Catalytic domain of the Protei	3e-17
cd06611	280	cd06611, STKc_SLK_like, Catalytic domain of Ste20-	4e-17
cd05069	260	cd05069, PTKc_Yes, Catalytic domain of the Protein	5e-17
cd07842	316	cd07842, STKc_CDK8_like, Catalytic domain of Cycli	7e-17
cd07838	287	cd07838, STKc_CDK4_6_like, Catalytic domain of Cyc	7e-17
cd05577	277	cd05577, STKc_GRK, Catalytic domain of the Protein	8e-17
PLN00009	294	PLN00009, PLN00009, cyclin-dependent kinase A; Pro	9e-17
cd06624	268	cd06624, STKc_ASK, Catalytic domain of the Protein	1e-16
cd08218	256	cd08218, STKc_Nek1, Catalytic domain of the Protei	1e-16
cd05094	291	cd05094, PTKc_TrkC, Catalytic domain of the Protei	1e-16
cd06630	268	cd06630, STKc_MEKK1, Catalytic domain of the Prote	1e-16
cd05081	284	cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2)	1e-16
cd07860	284	cd07860, STKc_CDK2_3, Catalytic domain of the Seri	2e-16
cd07871	288	cd07871, STKc_PCTAIRE3, Catalytic domain of the Se	2e-16
cd05093	288	cd05093, PTKc_TrkB, Catalytic domain of the Protei	4e-16
cd07873	301	cd07873, STKc_PCTAIRE1, Catalytic domain of the Se	5e-16
cd07844	291	cd07844, STKc_PCTAIRE_like, Catalytic domain of PC	5e-16
cd05044	269	cd05044, PTKc_c-ros, Catalytic domain of the Prote	6e-16
cd05089	297	cd05089, PTKc_Tie1, Catalytic domain of the Protei	7e-16
cd07832	286	cd07832, STKc_CCRK, Catalytic domain of the Serine	7e-16
cd06653	264	cd06653, STKc_MEKK3_like_1, Catalytic domain of MA	8e-16
cd06651	266	cd06651, STKc_MEKK3, Catalytic domain of the Prote	8e-16
cd05073	260	cd05073, PTKc_Hck, Catalytic domain of the Protein	8e-16
cd06613	262	cd06613, STKc_MAP4K3_like, Catalytic domain of Mit	9e-16
cd06655	296	cd06655, STKc_PAK2, Catalytic domain of the Protei	1e-15
cd06652	265	cd06652, STKc_MEKK2, Catalytic domain of the Prote	1e-15
cd07834	330	cd07834, STKc_MAPK, Catalytic domain of the Serine	2e-15
cd05632	285	cd05632, STKc_GRK5, Catalytic domain of the Protei	2e-15
cd05053	293	cd05053, PTKc_FGFR, Catalytic domain of the Protei	2e-15
cd05072	261	cd05072, PTKc_Lyn, Catalytic domain of the Protein	2e-15
cd08219	255	cd08219, STKc_Nek3, Catalytic domain of the Protei	2e-15
cd05630	285	cd05630, STKc_GRK6, Catalytic domain of the Protei	2e-15
cd05035	273	cd05035, PTKc_Axl_like, Catalytic Domain of Axl-li	3e-15
cd05088	303	cd05088, PTKc_Tie2, Catalytic domain of the Protei	3e-15
cd05581	280	cd05581, STKc_PDK1, Catalytic domain of the Protei	6e-15
cd05572	262	cd05572, STKc_cGK_PKG, Catalytic domain of the Pro	6e-15
cd05047	270	cd05047, PTKc_Tie, Catalytic domain of Tie Protein	6e-15
cd06628	267	cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain o	7e-15
cd05085	250	cd05085, PTKc_Fer, Catalytic domain of the Protein	7e-15
cd05570	318	cd05570, STKc_PKC, Catalytic domain of the Protein	8e-15
cd07870	291	cd07870, STKc_PFTAIRE2, Catalytic domain of the Se	1e-14
cd05099	314	cd05099, PTKc_FGFR4, Catalytic domain of the Prote	1e-14
cd05100	334	cd05100, PTKc_FGFR3, Catalytic domain of the Prote	1e-14
cd06656	297	cd06656, STKc_PAK3, Catalytic domain of the Protei	2e-14
cd06917	277	cd06917, STKc_NAK1_like, Catalytic domain of Funga	2e-14
cd06619	279	cd06619, PKc_MKK5, Catalytic domain of the dual-sp	2e-14
cd06654	296	cd06654, STKc_PAK1, Catalytic domain of the Protei	2e-14
cd05115	257	cd05115, PTKc_Zap-70, Catalytic domain of the Prot	3e-14
cd05631	285	cd05631, STKc_GRK4, Catalytic domain of the Protei	3e-14
cd05098	307	cd05098, PTKc_FGFR1, Catalytic domain of the Prote	3e-14
cd07847	286	cd07847, STKc_CDKL1_4, Catalytic domain of the Ser	3e-14
cd05045	290	cd05045, PTKc_RET, Catalytic domain of the Protein	4e-14
cd06642	277	cd06642, STKc_STK25-YSK1, Catalytic domain of the	4e-14
cd05050	288	cd05050, PTKc_Musk, Catalytic domain of the Protei	4e-14
cd06650	333	cd06650, PKc_MEK1, Catalytic domain of the dual-sp	4e-14
cd06631	265	cd06631, STKc_YSK4, Catalytic domain of the Protei	5e-14
cd05605	285	cd05605, STKc_GRK4_like, Catalytic domain of G pro	5e-14
cd07846	286	cd07846, STKc_CDKL2_3, Catalytic domain of the Ser	5e-14
cd07843	293	cd07843, STKc_CDC2L1, Catalytic domain of the Seri	6e-14
cd06648	285	cd06648, STKc_PAK_II, Catalytic domain of the Prot	1e-13
cd06640	277	cd06640, STKc_MST4, Catalytic domain of the Protei	1e-13
cd06644	292	cd06644, STKc_STK10_LOK, Catalytic domain of the P	2e-13
cd06641	277	cd06641, STKc_MST3, Catalytic domain of the Protei	2e-13
cd05116	257	cd05116, PTKc_Syk, Catalytic domain of the Protein	2e-13
cd05074	273	cd05074, PTKc_Tyro3, Catalytic domain of the Prote	2e-13
cd06622	286	cd06622, PKc_MAPKK_PBS2_like, Catalytic domain of	2e-13
cd07849	336	cd07849, STKc_ERK1_2_like, Catalytic domain of Ext	3e-13
TIGR03903	1266	TIGR03903, TOMM_kin_cyc, TOMM system kinase/cyclas	3e-13
cd07862	290	cd07862, STKc_CDK6, Catalytic domain of the Serine	4e-13
cd05608	280	cd05608, STKc_GRK1, Catalytic domain of the Protei	4e-13
cd05591	321	cd05591, STKc_nPKC_epsilon, Catalytic domain of th	4e-13
cd05056	270	cd05056, PTKc_FAK, Catalytic domain of the Protein	5e-13
cd08530	256	cd08530, STKc_CNK2-like, Catalytic domain of the P	6e-13
cd05092	280	cd05092, PTKc_TrkA, Catalytic domain of the Protei	6e-13
cd05593	328	cd05593, STKc_PKB_gamma, Catalytic domain of the P	6e-13
cd05589	324	cd05589, STKc_PKN, Catalytic domain of the Protein	7e-13
PHA03210	501	PHA03210, PHA03210, serine/threonine kinase US3; P	7e-13
cd06615	308	cd06615, PKc_MEK, Catalytic domain of the dual-spe	8e-13
cd05061	288	cd05061, PTKc_InsR, Catalytic domain of the Protei	8e-13
cd05097	295	cd05097, PTKc_DDR_like, Catalytic domain of Discoi	9e-13
cd05590	320	cd05590, STKc_nPKC_eta, Catalytic domain of the Pr	1e-12
cd08229	267	cd08229, STKc_Nek7, Catalytic domain of the Protei	1e-12
cd05611	260	cd05611, STKc_Rim15_like, Catalytic domain of fung	1e-12
cd06620	284	cd06620, PKc_MAPKK_Byr1_like, Catalytic domain of	1e-12
cd06649	331	cd06649, PKc_MEK2, Catalytic domain of the dual-sp	1e-12
cd05619	316	cd05619, STKc_nPKC_theta, Catalytic domain of the	1e-12
cd05101	304	cd05101, PTKc_FGFR2, Catalytic domain of the Prote	2e-12
cd07858	337	cd07858, STKc_TEY_MAPK_plant, Catalytic domain of	2e-12
cd05051	296	cd05051, PTKc_DDR, Catalytic domain of the Protein	2e-12
cd05617	327	cd05617, STKc_aPKC_zeta, Catalytic domain of the P	2e-12
cd05618	329	cd05618, STKc_aPKC_iota, Catalytic domain of the P	2e-12
cd06658	292	cd06658, STKc_PAK5, Catalytic domain of the Protei	2e-12
cd07830	283	cd07830, STKc_MAK_like, Catalytic domain of Male g	2e-12
cd05110	303	cd05110, PTKc_HER4, Catalytic domain of the Protei	2e-12
cd06616	288	cd06616, PKc_MKK4, Catalytic domain of the dual-sp	2e-12
cd06659	297	cd06659, STKc_PAK6, Catalytic domain of the Protei	2e-12
cd05575	323	cd05575, STKc_SGK, Catalytic domain of the Protein	2e-12
cd05594	325	cd05594, STKc_PKB_alpha, Catalytic domain of the P	2e-12
cd08224	267	cd08224, STKc_Nek6_Nek7, Catalytic domain of the P	3e-12
cd05055	302	cd05055, PTKc_PDGFR, Catalytic domain of the Prote	3e-12
cd07852	337	cd07852, STKc_MAPK15, Catalytic domain of the Seri	4e-12
cd07863	288	cd07863, STKc_CDK4, Catalytic domain of the Serine	4e-12
cd05090	283	cd05090, PTKc_Ror1, Catalytic domain of the Protei	6e-12
cd05612	291	cd05612, STKc_PRKX_like, Catalytic domain of PRKX-	6e-12
cd08228	267	cd08228, STKc_Nek6, Catalytic domain of the Protei	6e-12
PRK13184	932	PRK13184, pknD, serine/threonine-protein kinase; R	7e-12
PTZ00283	496	PTZ00283, PTZ00283, serine/threonine protein kinas	7e-12
cd05111	279	cd05111, PTK_HER3, Pseudokinase domain of the Prot	1e-11
cd05579	265	cd05579, STKc_MAST_like, Catalytic domain of Micro	1e-11
cd05592	316	cd05592, STKc_nPKC_theta_delta, Catalytic domain o	1e-11
cd05096	304	cd05096, PTKc_DDR1, Catalytic domain of the Protei	1e-11
cd05079	284	cd05079, PTKc_Jak1_rpt2, Catalytic (repeat 2) doma	1e-11
cd05062	277	cd05062, PTKc_IGF-1R, Catalytic domain of the Prot	1e-11
cd05620	316	cd05620, STKc_nPKC_delta, Catalytic domain of the	1e-11
cd05040	257	cd05040, PTKc_Ack_like, Catalytic domain of the Pr	2e-11
cd07837	295	cd07837, STKc_CdkB_plant, Catalytic domain of the	2e-11
cd06643	282	cd06643, STKc_SLK, Catalytic domain of the Protein	2e-11
cd05091	283	cd05091, PTKc_Ror2, Catalytic domain of the Protei	2e-11
PTZ00267	478	PTZ00267, PTZ00267, NIMA-related protein kinase; P	2e-11
cd05046	275	cd05046, PTK_CCK4, Pseudokinase domain of the Prot	2e-11
cd05042	269	cd05042, PTKc_Aatyk, Catalytic domain of the Prote	3e-11
cd05587	324	cd05587, STKc_cPKC, Catalytic domain of the Protei	4e-11
cd06635	317	cd06635, STKc_TAO1, Catalytic domain of the Protei	4e-11
cd05043	280	cd05043, PTK_Ryk, Pseudokinase domain of Ryk (Rece	4e-11
cd08528	269	cd08528, STKc_Nek10, Catalytic domain of the Prote	4e-11
cd06607	307	cd06607, STKc_TAO, Catalytic domain of the Protein	4e-11
PTZ00024	335	PTZ00024, PTZ00024, cyclin-dependent protein kinas	4e-11
cd07869	303	cd07869, STKc_PFTAIRE1, Catalytic domain of the Se	4e-11
cd05604	325	cd05604, STKc_SGK3, Catalytic domain of the Protei	5e-11
cd05615	323	cd05615, STKc_cPKC_alpha, Catalytic domain of the	5e-11
cd05571	323	cd05571, STKc_PKB, Catalytic domain of the Protein	5e-11
cd07859	338	cd07859, STKc_TDY_MAPK_plant, Catalytic domain of	7e-11
cd05075	272	cd05075, PTKc_Axl, Catalytic domain of the Protein	7e-11
cd06645	267	cd06645, STKc_MAP4K3, Catalytic domain of the Prot	7e-11
cd05616	323	cd05616, STKc_cPKC_beta, Catalytic domain of the P	7e-11
cd05580	290	cd05580, STKc_PKA, Catalytic domain of the Protein	8e-11
cd07867	317	cd07867, STKc_CDC2L6, Catalytic domain of Serine/T	8e-11
cd06646	267	cd06646, STKc_MAP4K5, Catalytic domain of the Prot	8e-11
cd05595	323	cd05595, STKc_PKB_beta, Catalytic domain of the Pr	9e-11
cd05603	321	cd05603, STKc_SGK2, Catalytic domain of the Protei	9e-11
cd06634	308	cd06634, STKc_TAO2, Catalytic domain of the Protei	1e-10
PHA03209	357	PHA03209, PHA03209, serine/threonine kinase US3; P	1e-10
cd05037	259	cd05037, PTK_Jak_rpt1, Pseudokinase (repeat 1) dom	1e-10
cd05588	329	cd05588, STKc_aPKC, Catalytic domain of the Protei	1e-10
cd05583	288	cd05583, STKc_MSK_N, N-terminal catalytic domain o	1e-10
cd05582	318	cd05582, STKc_RSK_N, N-terminal catalytic domain o	1e-10
cd07848	287	cd07848, STKc_CDKL5, Catalytic domain of the Serin	2e-10
cd05601	330	cd05601, STKc_CRIK, Catalytic domain of the Protei	2e-10
cd05586	330	cd05586, STKc_Sck1_like, Catalytic domain of Suppr	2e-10
cd06657	292	cd06657, STKc_PAK4, Catalytic domain of the Protei	3e-10
cd06633	313	cd06633, STKc_TAO3, Catalytic domain of the Protei	5e-10
cd05095	296	cd05095, PTKc_DDR2, Catalytic domain of the Protei	6e-10
cd06639	291	cd06639, STKc_myosinIIIB, Catalytic domain of the	6e-10
cd05614	332	cd05614, STKc_MSK2_N, N-terminal catalytic domain	9e-10
PTZ00263	329	PTZ00263, PTZ00263, protein kinase A catalytic sub	9e-10
cd07857	332	cd07857, STKc_MPK1, Catalytic domain of the Serine	1e-09
cd07868	317	cd07868, STKc_CDK8, Catalytic domain of the Serine	1e-09
cd06618	296	cd06618, PKc_MKK7, Catalytic domain of the dual-sp	1e-09
cd05597	331	cd05597, STKc_DMPK_like, Catalytic domain of Myoto	2e-09
cd05087	269	cd05087, PTKc_Aatyk1_Aatyk3, Catalytic domain of t	2e-09
cd06636	282	cd06636, STKc_MAP4K4_6, Catalytic domain of the Pr	2e-09
cd06637	272	cd06637, STKc_TNIK, Catalytic domain of the Protei	2e-09
cd05077	262	cd05077, PTK_Jak1_rpt1, Pseudokinase (repeat 1) do	2e-09
cd07854	342	cd07854, STKc_MAPK4_6, Catalytic domain of the Ser	2e-09
cd08222	260	cd08222, STKc_Nek11, Catalytic domain of the Prote	3e-09
cd07879	342	cd07879, STKc_p38delta_MAPK13, Catalytic domain of	3e-09
cd05633	279	cd05633, STKc_GRK3, Catalytic domain of the Protei	3e-09
cd05624	331	cd05624, STKc_MRCK_beta, Catalytic domain of the P	3e-09
cd05606	278	cd05606, STKc_beta_ARK, Catalytic domain of the Pr	3e-09
PHA03207	392	PHA03207, PHA03207, serine/threonine kinase US3; P	3e-09
cd05596	370	cd05596, STKc_ROCK, Catalytic domain of the Protei	3e-09
cd07853	372	cd07853, STKc_NLK, Catalytic domain of the Serine/	5e-09
cd06638	286	cd06638, STKc_myosinIIIA, Catalytic domain of the	7e-09
cd05078	258	cd05078, PTK_Jak2_Jak3_rpt1, Pseudokinase (repeat	1e-08
cd05102	338	cd05102, PTKc_VEGFR3, Catalytic domain of the Prot	2e-08
cd06617	283	cd06617, PKc_MKK3_6, Catalytic domain of the dual-	3e-08
cd07880	343	cd07880, STKc_p38gamma_MAPK12, Catalytic domain of	3e-08
cd05585	312	cd05585, STKc_YPK1_like, Catalytic domain of Yeast	5e-08
cd07851	343	cd07851, STKc_p38, Catalytic domain of the Serine/	5e-08
cd05602	325	cd05602, STKc_SGK1, Catalytic domain of the Protei	5e-08
cd05584	323	cd05584, STKc_p70S6K, Catalytic domain of the Prot	5e-08
cd05076	274	cd05076, PTK_Tyk2_rpt1, Pseudokinase (repeat 1) do	7e-08
cd07856	328	cd07856, STKc_Sty1_Hog1, Catalytic domain of the S	9e-08
cd05105	400	cd05105, PTKc_PDGFR_alpha, Catalytic domain of the	2e-07
cd05613	290	cd05613, STKc_MSK1_N, N-terminal catalytic domain	2e-07
cd07876	359	cd07876, STKc_JNK2, Catalytic domain of the Serine	2e-07
cd07875	364	cd07875, STKc_JNK1, Catalytic domain of the Serine	2e-07
cd05622	371	cd05622, STKc_ROCK1, Catalytic domain of the Prote	3e-07
PTZ00266	1021	PTZ00266, PTZ00266, NIMA-related protein kinase; P	3e-07
cd05106	374	cd05106, PTKc_CSF-1R, Catalytic domain of the Prot	4e-07
cd05621	370	cd05621, STKc_ROCK2, Catalytic domain of the Prote	4e-07
cd05623	332	cd05623, STKc_MRCK_alpha, Catalytic domain of the	5e-07
cd07877	345	cd07877, STKc_p38alpha_MAPK14, Catalytic domain of	5e-07
cd05109	279	cd05109, PTKc_HER2, Catalytic domain of the Protei	6e-07
cd05573	350	cd05573, STKc_ROCK_NDR_like, Catalytic domain of R	7e-07
cd05104	375	cd05104, PTKc_Kit, Catalytic domain of the Protein	8e-07
cd05108	316	cd05108, PTKc_EGFR, Catalytic domain of the Protei	9e-07
cd05574	316	cd05574, STKc_phototropin_like, Catalytic domain o	1e-06
cd05600	333	cd05600, STKc_Sid2p_Dbf2p, Catalytic domain of Fun	1e-06
PTZ00426	340	PTZ00426, PTZ00426, cAMP-dependent protein kinase	3e-06
cd07874	355	cd07874, STKc_JNK3, Catalytic domain of the Serine	3e-06
cd05103	343	cd05103, PTKc_VEGFR2, Catalytic domain of the Prot	3e-06
cd07878	343	cd07878, STKc_p38beta_MAPK11, Catalytic domain of	4e-06
cd07831	282	cd07831, STKc_MOK, Catalytic domain of the Serine/	1e-05
cd05054	337	cd05054, PTKc_VEGFR, Catalytic domain of the Prote	2e-05
PHA03211	461	PHA03211, PHA03211, serine/threonine kinase US3; P	2e-05
PHA03212	391	PHA03212, PHA03212, serine/threonine kinase US3; P	4e-05
PTZ00036	440	PTZ00036, PTZ00036, glycogen synthase kinase; Prov	5e-05
cd05086	268	cd05086, PTKc_Aatyk2, Catalytic domain of the Prot	5e-05
cd05107	401	cd05107, PTKc_PDGFR_beta, Catalytic domain of the	1e-04
cd05609	305	cd05609, STKc_MAST, Catalytic domain of the Protei	1e-04
cd05627	360	cd05627, STKc_NDR2, Catalytic domain of the Protei	2e-04
cd07850	353	cd07850, STKc_JNK, Catalytic domain of the Serine/	3e-04
cd05628	363	cd05628, STKc_NDR1, Catalytic domain of the Protei	4e-04
PHA03390	267	PHA03390, pk1, serine/threonine-protein kinase 1;	4e-04
cd08216	314	cd08216, PK_STRAD, Pseudokinase domain of STE20-re	4e-04
cd05599	364	cd05599, STKc_NDR_like, Catalytic domain of Nuclea	0.001
cd05598	376	cd05598, STKc_LATS, Catalytic domain of the Protei	0.002

>gnl|CDD|215744 pfam00139, Lectin_legB, Legume lectin domain

 Score =  281 bits (721), Expect = 2e-90
 Identities = 119/255 (46%), Positives = 151/255 (59%), Gaps = 27/255 (10%)

Query: 24  SAVDFVFNGF-NSSNLSLYGTATV-ESRILTLTNSTTFTIGRALYPSKIPTKRPNSSYVY 81
           S V F +NGF N SNL+L G ATV  + +L LTN T  + GRALY   I     ++  V 
Sbjct: 1   STVSFNYNGFSNVSNLTLQGDATVLPNGLLQLTNVTNNSAGRALYSKPIRLWDSSTGKVA 60

Query: 82  PFSTSFIFAMAPY-KGVLAGHGLVFLFVPFHGIKGATEAQHLGLFNRTNDGNSSNHVFGV 140
            FSTSF+FA+    K    G GL F   P     GA+   +LGLFN +N+GNSSNH+  V
Sbjct: 61  SFSTSFVFAIKNIPKSTNGGDGLAFFLAPSGTQPGASSGGYLGLFNSSNNGNSSNHIVAV 120

Query: 141 EFDVFKNQEFNDIDENHVGIDVNSLTSVSAHAAGYWPDNQTDSSGSNSNSGTGDDEKSFK 200
           EFD F N EFNDID+NHVGIDVNS+ SV++ +A                        SF 
Sbjct: 121 EFDTFLNPEFNDIDDNHVGIDVNSIISVASESA------------------------SFV 156

Query: 201 ELKLNNGKNYQVWIDYADSFINITMVEAGMKRPKRPLLSVPLNLSGVLEDEMYVGFTAAT 260
            L LN+GK  QVWIDY  S   +++  A   +PKRPLLS  ++LS VL + +YVGF+A+T
Sbjct: 157 PLDLNSGKPIQVWIDYDGSSKRLSVTLAYPNKPKRPLLSASVDLSTVLPEWVYVGFSAST 216

Query: 261 GQLVESHKILAWSFS 275
           G   ESH +L+WSFS
Sbjct: 217 GGATESHYVLSWSFS 231

Length = 231

>gnl|CDD|173887 cd06899, lectin_legume_LecRK_Arcelin_ConA, legume lectins, lectin-like receptor kinases, arcelin, concanavalinA, and alpha-amylase inhibitor

 Score =  272 bits (698), Expect = 6e-87
 Identities = 117/259 (45%), Positives = 154/259 (59%), Gaps = 31/259 (11%)

Query: 26  VDFVFNGFNS--SNLSLYGTATVESR-ILTLTNST--TFTIGRALYPSKIPTKRPNSSYV 80
           + F FNGF+S  SNL+L G AT+ S   L LTN T    ++GRALY   +      +  V
Sbjct: 1   LSFNFNGFSSDQSNLTLQGDATISSNGALQLTNDTSPASSVGRALYSKPVRLWDSTTGKV 60

Query: 81  YPFSTSFIFAMAPYKGVLAGHGLVFLFVPFHGIKGATEAQHLGLFNRTNDGNSSNHVFGV 140
             FSTSF F++ P    L G GL F   P   +  A+   +LGLFN +N+GNSSNH+  V
Sbjct: 61  ASFSTSFSFSITPPNPSLGGDGLAFFLAPTDSLPPASSGGYLGLFNSSNNGNSSNHIVAV 120

Query: 141 EFDVFKNQEFNDIDENHVGIDVNSLTSVSAHAAGYWPDNQTDSSGSNSNSGTGDDEKSFK 200
           EFD F+N EF D D+NHVGIDVNSL SV    AGYW D+                     
Sbjct: 121 EFDTFQNPEFGDPDDNHVGIDVNSLVSV---KAGYWDDD--------------------- 156

Query: 201 ELKLNNGKNYQVWIDY--ADSFINITMVEAGMKRPKRPLLSVPLNLSGVLEDEMYVGFTA 258
             KL +GK  Q WIDY  +   +++T+  +G+ +PK+PLLS P++LS VL +E+YVGF+A
Sbjct: 157 GGKLKSGKPMQAWIDYDSSSKRLSVTLAYSGVAKPKKPLLSYPVDLSKVLPEEVYVGFSA 216

Query: 259 ATGQLVESHKILAWSFSNT 277
           +TG L E H IL+WSFS+ 
Sbjct: 217 STGLLTELHYILSWSFSSN 235

This alignment model includes the legume lectins (also known as agglutinins), the arcelin (also known as phytohemagglutinin-L) family of lectin-like defense proteins, the LecRK family of lectin-like receptor kinases, concanavalinA (ConA), and an alpha-amylase inhibitor. Arcelin is a major seed glycoprotein discovered in kidney beans (Phaseolus vulgaris) that has insecticidal properties and protects the seeds from predation by larvae of various bruchids. Arcelin is devoid of monosaccharide binding properties and lacks a key metal-binding loop that is present in other members of this family. Phytohaemagglutinin (PHA) is a lectin found in plants, especially beans, that affects cell metabolism by inducing mitosis and by altering the permeability of the cell membrane to various proteins. PHA agglutinates most mammalian red blood cell types by binding glycans on the cell surface. Medically, PHA is used as a mitogen to trigger cell division in T-lymphocytes and to activate latent HIV-1 from human peripheral lymphocytes. Plant L-type lectins are primarily found in the seeds of leguminous plants where they constitute about 10% of the total soluble protein of the seed extracts. They are synthesized during seed development several weeks after flowering and transported to the vacuole where they become condensed into specialized vesicles called protein bodies. L-type lectins have a dome-shaped beta-barrel carbohydrate recognition domain with a curved seven-stranded beta-sheet referred to as the "front face" and a flat six-stranded beta-sheet referred to as the "back face". This domain homodimerizes so that adjacent back sheets form a contiguous 12-stranded sheet and homotetramers occur by a back-to-back association of these homodimers. Though L-type lectins exhibit both sequence and structural similarity to one another, their carbohydrate binding specificities differ widely. Length = 236

>gnl|CDD|215690 pfam00069, Pkinase, Protein kinase domain

 Score =  161 bits (410), Expect = 4e-45
 Identities = 80/269 (29%), Positives = 125/269 (46%), Gaps = 23/269 (8%)

Query: 371 VIGVGGNGKVYKGVLEGGGAEIAVKRI--SHENDGGTRAFLAEISSLGRLKHKSLVGLRG 428
            +G G  G VYK   +G G  +AVK +    E     +    EI  L RL H ++V L  
Sbjct: 6   KLGSGSFGTVYKAKHKGTGKIVAVKILKKRSEKSKKDQTARREIRILRRLSHPNIVRLID 65

Query: 429 WCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKK 488
               +K  L LV +Y E G L  ++ +  G   LS +E  ++   +  G+ YLH      
Sbjct: 66  AF-EDKDHLYLVMEYCEGGDLFDYLSR-GGP--LSEDEAKKIALQILRGLEYLHS---NG 118

Query: 489 VLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGR-AS 547
           ++HRD+K  N+LLD+    ++ DFGLA+       + TT  VGT  Y+APEV   G    
Sbjct: 119 IIHRDLKPENILLDENGVVKIADFGLAKKLLKSSSSLTT-FVGTPWYMAPEVLLGGNGYG 177

Query: 548 TQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRAKGGFDEDE 607
            + DV+  G+++ E+L+G +P   G+  L ++  +L+ +      L   L          
Sbjct: 178 PKVDVWSLGVILYELLTG-KPPFSGENILDQL--QLIRRI-----LGPPLEFDEPKWSSG 229

Query: 608 VERVLHL--GLLCAYPDPRARPTMRQVVK 634
            E    L    L    DP  RPT  ++++
Sbjct: 230 SEEAKDLIKKCLN--KDPSKRPTAEEILQ 256

Length = 260

>gnl|CDD|214567 smart00220, S_TKc, Serine/Threonine protein kinases, catalytic domain

 Score =  158 bits (403), Expect = 3e-44
 Identities = 77/273 (28%), Positives = 127/273 (46%), Gaps = 27/273 (9%)

Query: 366 FSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRA-FLAEISSLGRLKHKSLV 424
           +     +G G  GKVY    +  G  +A+K I  +     R   L EI  L +LKH ++V
Sbjct: 1   YEILEKLGEGSFGKVYLARDKKTGKLVAIKVIKKKKIKKDRERILREIKILKKLKHPNIV 60

Query: 425 GLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIR-VLKDVAAGVLYLHE 483
            L      ++  L LV +Y E G L   + +  G +    E+  R  L+ + + + YLH 
Sbjct: 61  RLYDVF-EDEDKLYLVMEYCEGGDLFDLLKKR-GRL---SEDEARFYLRQILSALEYLHS 115

Query: 484 GWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSS 543
              K ++HRD+K  N+LLD++ + +L DFGLAR    G+  +T   VGT  Y+APEV   
Sbjct: 116 ---KGIVHRDLKPENILLDEDGHVKLADFGLARQLDPGEKLTT--FVGTPEYMAPEVLLG 170

Query: 544 GRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRAKGGF 603
                  D++  G+++ E+L+G+ P   G   L+E+ ++ + + K           +   
Sbjct: 171 KGYGKAVDIWSLGVILYELLTGKPPF-PGDDQLLEL-FKKIGKPKPPF-----PPPEWDI 223

Query: 604 DEDEVERVLHL--GLLCAYPDPRARPTMRQVVK 634
             +       L   LL    DP  R T  + ++
Sbjct: 224 SPE----AKDLIRKLLV--KDPEKRLTAEEALQ 250

Phosphotransferases. Serine or threonine-specific kinase subfamily. Length = 254

>gnl|CDD|173623 cd00180, PKc, Catalytic domain of Protein Kinases

 Score =  155 bits (393), Expect = 3e-43
 Identities = 67/194 (34%), Positives = 106/194 (54%), Gaps = 12/194 (6%)

Query: 372 IGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTR-AFLAEISSLGRLKHKSLVGLRGWC 430
           +G GG G VY    +  G ++A+K I  E+        L EI  L +L H ++V L G  
Sbjct: 1   LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVF 60

Query: 431 KREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVL 490
           + ++  L LV +Y E GSL   + + +G   LS +E +R+L  +  G+ YLH      ++
Sbjct: 61  E-DENHLYLVMEYCEGGSLKDLLKENEGK--LSEDEILRILLQILEGLEYLHS---NGII 114

Query: 491 HRDIKSSNVLLDKEMNGR--LGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSS-GRAS 547
           HRD+K  N+LLD + NG+  L DFGL+++    +    T  VGT  Y+APEV    G  S
Sbjct: 115 HRDLKPENILLDSD-NGKVKLADFGLSKLLTSDKSLLKTI-VGTPAYMAPEVLLGKGYYS 172

Query: 548 TQTDVFGFGILILE 561
            ++D++  G+++ E
Sbjct: 173 EKSDIWSLGVILYE 186

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which one kinase activates a second kinase, which in turn, may act on other kinases; this sequential action transmits a signal from the cell surface to target proteins, which results in cellular responses. The PK family is one of the largest known protein families with more than 100 homologous yeast enzymes and 550 human proteins. A fraction of PK family members are pseudokinases that lack crucial residues for catalytic activity. The mutiplicity of kinases allows for specific regulation according to substrate, tissue distribution, and cellular localization. PKs regulate many cellular processes including proliferation, division, differentiation, motility, survival, metabolism, cell-cycle progression, cytoskeletal rearrangement, immunity, and neuronal functions. Many kinases are implicated in the development of various human diseases including different types of cancer. Length = 215

>gnl|CDD|197581 smart00219, TyrKc, Tyrosine kinase, catalytic domain

 Score =  152 bits (386), Expect = 8e-42
 Identities = 76/274 (27%), Positives = 127/274 (46%), Gaps = 26/274 (9%)

Query: 369 ENVIGVGGNGKVYKGVLEGGG----AEIAVKRISHENDGGTRA-FLAEISSLGRLKHKSL 423
              +G G  G+VYKG L+G G     E+AVK +  +        FL E   + +L H ++
Sbjct: 4   GKKLGEGAFGEVYKGKLKGKGGKKKVEVAVKTLKEDASEQQIEEFLREARIMRKLDHPNV 63

Query: 424 VGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHE 483
           V L G C  E+  L +V +YME G L  ++ +      LS  + +     +A G+ YL  
Sbjct: 64  VKLLGVC-TEEEPLYIVMEYMEGGDLLSYLRKNRPK--LSLSDLLSFALQIARGMEYLES 120

Query: 484 GWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSS 543
              K  +HRD+ + N L+ + +  ++ DFGL+R                + ++APE    
Sbjct: 121 ---KNFIHRDLAARNCLVGENLVVKISDFGLSRDLYDDDYYRKRGGKLPIRWMAPESLKE 177

Query: 544 GRASTQTDVFGFGILILEVLS-GRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRAKGG 602
           G+ ++++DV+ FG+L+ E+ + G +P   G  N    V E +  G  L            
Sbjct: 178 GKFTSKSDVWSFGVLLWEIFTLGEQP-YPGMSNEE--VLEYLKNGYRLPQPPN------- 227

Query: 603 FDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVL 636
               E+  ++   L C   DP  RPT  ++V++L
Sbjct: 228 -CPPELYDLM---LQCWAEDPEDRPTFSELVEIL 257

Phosphotransferases. Tyrosine-specific kinase subfamily. Length = 257

>gnl|CDD|214568 smart00221, STYKc, Protein kinase; unclassified specificity

 Score =  151 bits (385), Expect = 1e-41
 Identities = 77/276 (27%), Positives = 131/276 (47%), Gaps = 29/276 (10%)

Query: 369 ENVIGVGGNGKVYKGVLEGGGA----EIAVKRISHENDGGTRA-FLAEISSLGRLKHKSL 423
              +G G  G+VYKG L+G G     E+AVK +  +        FL E   + +L H ++
Sbjct: 4   GKKLGEGAFGEVYKGTLKGKGDGKEVEVAVKTLKEDASEQQIEEFLREARIMRKLDHPNI 63

Query: 424 VGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHE 483
           V L G C  E+  LM+V +YM  G L  ++ +      LS  + +     +A G+ YL  
Sbjct: 64  VKLLGVC-TEEEPLMIVMEYMPGGDLLDYLRKNRPKE-LSLSDLLSFALQIARGMEYLES 121

Query: 484 GWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQV--ASTTRVVGTVGYLAPEVF 541
              K  +HRD+ + N L+ + +  ++ DFGL+R             ++   + ++APE  
Sbjct: 122 ---KNFIHRDLAARNCLVGENLVVKISDFGLSRDLYDDDYYKVKGGKL--PIRWMAPESL 176

Query: 542 SSGRASTQTDVFGFGILILEVLS-GRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRAK 600
             G+ ++++DV+ FG+L+ E+ + G  P   G  N    V E + +G  L         K
Sbjct: 177 KEGKFTSKSDVWSFGVLLWEIFTLGEEP-YPGMSN--AEVLEYLKKGYRLP--------K 225

Query: 601 GGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVL 636
                 E+ +++   L C   DP  RPT  ++V++L
Sbjct: 226 PPNCPPELYKLM---LQCWAEDPEDRPTFSELVEIL 258

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. Length = 258

>gnl|CDD|173624 cd00192, PTKc, Catalytic domain of Protein Tyrosine Kinases

 Score =  143 bits (364), Expect = 9e-39
 Identities = 81/283 (28%), Positives = 133/283 (46%), Gaps = 36/283 (12%)

Query: 370 NVIGVGGNGKVYKGVLEGGGA---EIAVKRISHENDGGTR-AFLAEISSLGRLKHKSLVG 425
             +G G  G+VYKG L+G      E+AVK +  +     R  FL E   + +L H ++V 
Sbjct: 1   KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVR 60

Query: 426 LRGWCKREKGSLMLVYDYMENGSLDKWI------FQCDGSMMLSCEERIRVLKDVAAGVL 479
           L G C  E+  L LV +YME G L  ++      F       LS ++ +     +A G+ 
Sbjct: 61  LLGVC-TEEEPLYLVLEYMEGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGME 119

Query: 480 YLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRVVGT---VGYL 536
           YL     KK +HRD+ + N L+ +++  ++ DFGL+R              G    + ++
Sbjct: 120 YLAS---KKFVHRDLAARNCLVGEDLVVKISDFGLSRDVYDDDYYRKKT--GGKLPIRWM 174

Query: 537 APEVFSSGRASTQTDVFGFGILILEVLS-GRRPIEEGKPNLVEMVWELMVQGKLLDALDA 595
           APE    G  ++++DV+ FG+L+ E+ + G  P          +  E     ++L+ L  
Sbjct: 175 APESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPG-------LSNE-----EVLEYLRK 222

Query: 596 RLR-AKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLE 637
             R  K  +  DE+  ++   L C   DP  RPT  ++V+ LE
Sbjct: 223 GYRLPKPEYCPDELYELM---LSCWQLDPEDRPTFSELVERLE 262

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain, leading to intracellular signaling. Some RTKs are orphan receptors with no known ligands. Non-receptor (or cytoplasmic) tyr kinases are distributed in different intracellular compartments and are usually multi-domain proteins containing a catalytic tyr kinase domain as well as various regulatory domains such as SH3 and SH2. PTKs are usually autoinhibited and require a mechanism for activation. In many PTKs, the phosphorylation of tyr residues in the activation loop is essential for optimal activity. Aberrant expression of PTKs is associated with many development abnormalities and cancers. Length = 262

>gnl|CDD|219530 pfam07714, Pkinase_Tyr, Protein tyrosine kinase

 Score =  142 bits (361), Expect = 2e-38
 Identities = 77/275 (28%), Positives = 134/275 (48%), Gaps = 31/275 (11%)

Query: 371 VIGVGGNGKVYKGVL----EGGGAEIAVKRISHENDGGTR-AFLAEISSLGRLKHKSLVG 425
            +G G  G+VYKG L    EG   ++AVK +        R  FL E S + +L H ++V 
Sbjct: 6   KLGEGAFGEVYKGTLKGDGEGTETKVAVKTLKEGASEEEREEFLEEASIMKKLSHPNIVR 65

Query: 426 LRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGW 485
           L G C +    L +V +YM  G L  ++ +      L+ ++ +++   +A G+ YL    
Sbjct: 66  LLGVCTQG-EPLYIVTEYMPGGDLLDFLRKHGEK--LTLKDLLQMALQIAKGMEYLES-- 120

Query: 486 EKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHG---QVASTTRVVGTVGYLAPEVFS 542
            K  +HRD+ + N L+ + +  ++ DFGL+R        +     ++   + ++APE   
Sbjct: 121 -KNFVHRDLAARNCLVTENLVVKISDFGLSRDIYEDDYYRKRGGGKL--PIKWMAPESLK 177

Query: 543 SGRASTQTDVFGFGILILEVLS-GRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRAKG 601
            G+ ++++DV+ FG+L+ E+ + G +P   G  N  E V EL+  G  L   +       
Sbjct: 178 DGKFTSKSDVWSFGVLLWEIFTLGEQPY-PGMSN--EEVLELLEDGYRLPRPE------- 227

Query: 602 GFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVL 636
               DE+  ++   L C   DP  RPT  ++V+ L
Sbjct: 228 -NCPDELYELM---LQCWAYDPEDRPTFSELVEDL 258

Length = 258

>gnl|CDD|173724 cd06606, STKc_MAPKKK, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

 Score =  130 bits (329), Expect = 6e-34
 Identities = 61/209 (29%), Positives = 101/209 (48%), Gaps = 22/209 (10%)

Query: 370 NVIGVGGNGKVYKGVLEGGGAEIAVK--RISHENDGGTRAFLAEISSLGRLKHKSLVGLR 427
            ++G G  G VY  + +  G  +AVK   +S +++    A   EI  L  L+H ++V   
Sbjct: 6   ELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYY 65

Query: 428 GWCKR--EKGSLMLVYDYMENGSLDKWIFQCDGSMMLSC----EERIRVL-KDVAAGVLY 480
           G  +R  EK +L +  +Y+  GSL         S++       E  IR   + +  G+ Y
Sbjct: 66  G-SERDEEKNTLNIFLEYVSGGSL--------SSLLKKFGKLPEPVIRKYTRQILEGLAY 116

Query: 481 LHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTR-VVGTVGYLAPE 539
           LH      ++HRDIK +N+L+D +   +L DFG A+  G  +    T  V GT  ++APE
Sbjct: 117 LHS---NGIVHRDIKGANILVDSDGVVKLADFGCAKRLGDIETGEGTGSVRGTPYWMAPE 173

Query: 540 VFSSGRASTQTDVFGFGILILEVLSGRRP 568
           V          D++  G  ++E+ +G+ P
Sbjct: 174 VIRGEEYGRAADIWSLGCTVIEMATGKPP 202

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKKK5) and ASK2 (or MAPKKK6), MEKK1, MEKK2, MEKK3, MEKK4, as well as plant and fungal MAPKKKs. Also included in this subfamily are the cell division control proteins Schizosaccharomyces pombe Cdc7 and Saccharomyces cerevisiae Cdc15. Length = 260

>gnl|CDD|173731 cd06627, STKc_Cdc7_like, Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

 Score =  126 bits (318), Expect = 1e-32
 Identities = 69/207 (33%), Positives = 106/207 (51%), Gaps = 10/207 (4%)

Query: 370 NVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGT--RAFLAEISSLGRLKHKSLVGLR 427
           ++IG G  G VYKG+    G  +A+K+IS E       ++ + EI  L  LKH ++V   
Sbjct: 6   DLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYI 65

Query: 428 GWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEK 487
           G       SL ++ +Y ENGSL + I +               +  V  G+ YLHE   +
Sbjct: 66  G-SIETSDSLYIILEYAENGSLRQIIKKFGP---FPESLVAVYVYQVLQGLAYLHE---Q 118

Query: 488 KVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRAS 547
            V+HRDIK++N+L  K+   +L DFG+A    +        VVGT  ++APEV     AS
Sbjct: 119 GVIHRDIKAANILTTKDGVVKLADFGVA-TKLNDVSKDDASVVGTPYWMAPEVIEMSGAS 177

Query: 548 TQTDVFGFGILILEVLSGRRPIEEGKP 574
           T +D++  G  ++E+L+G  P  +  P
Sbjct: 178 TASDIWSLGCTVIELLTGNPPYYDLNP 204

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Cdc7 is essential for cell division by playing a key role in the initiation of septum formation and cytokinesis. Budding yeast Cdc15 functions to coordinate mitotic exit with cytokinesis. Arabidopsis MAPKKK epsilon is required for pollen development in the plasma membrane. Length = 254

>gnl|CDD|143345 cd07840, STKc_CDK9_like, Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

 Score =  125 bits (316), Expect = 6e-32
 Identities = 68/223 (30%), Positives = 114/223 (51%), Gaps = 21/223 (9%)

Query: 372 IGVGGNGKVYKGVLEGGGAEIAVKRI--SHENDGGTRAFLAEISSLGRLKHKSLVGLRG- 428
           IG G  G+VYK   +  G  +A+K+I   +E +G     + EI  L +L+H ++V L+  
Sbjct: 7   IGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNIVRLKEI 66

Query: 429 WCKREKGSLMLVYDYME---NGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGW 485
              + KGS+ +V++YM+    G LD         +  +  +    +K +  G+ YLH   
Sbjct: 67  VTSKGKGSIYMVFEYMDHDLTGLLDS------PEVKFTESQIKCYMKQLLEGLQYLHS-- 118

Query: 486 EKKVLHRDIKSSNVLLDKEMNGRLGDFGLAR-MHGHGQVASTTRVVGTVGYLAPEV-FSS 543
              +LHRDIK SN+L++ +   +L DFGLAR          T RV+ T+ Y  PE+   +
Sbjct: 119 -NGILHRDIKGSNILINNDGVLKLADFGLARPYTKRNSADYTNRVI-TLWYRPPELLLGA 176

Query: 544 GRASTQTDVFGFGILILEVLSGRRPIEEGK--PNLVEMVWELM 584
            R   + D++  G ++ E+  G +PI +G      +E ++EL 
Sbjct: 177 TRYGPEVDMWSVGCILAELFLG-KPIFQGSTELEQLEKIFELC 218

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA polymerase II and participate in regulating mutliple steps of gene expression including transcription elongation and RNA processing. CDK9 and CdkC associate with T-type cyclins while BUR1 associates with the cyclin BUR2. CDK12 is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 interacts with cyclins L1 and L2, and participates in regulating transcription and alternative splicing. Length = 287

>gnl|CDD|173659 cd05122, PKc_STE, Catalytic domain of STE family Protein Kinases

 Score =  120 bits (302), Expect = 2e-30
 Identities = 65/210 (30%), Positives = 106/210 (50%), Gaps = 16/210 (7%)

Query: 366 FSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVG 425
           F     IG GG G+VYK   +  G E+A+K I  E+       + EI  L + KH ++V 
Sbjct: 2   FEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKCKHPNIVK 61

Query: 426 LRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIR-VLKDVAAGVLYLHEG 484
             G    +K  L +V ++   GSL   +   + ++    E +I  V K++  G+ YLH  
Sbjct: 62  YYG-SYLKKDELWIVMEFCSGGSLKDLLKSTNQTL---TESQIAYVCKELLKGLEYLHS- 116

Query: 485 WEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVAST---TRVVGTVGYLAPEVF 541
               ++HRDIK++N+LL  +   +L DFGL+      Q++ T     +VGT  ++APEV 
Sbjct: 117 --NGIIHRDIKAANILLTSDGEVKLIDFGLS-----AQLSDTKARNTMVGTPYWMAPEVI 169

Query: 542 SSGRASTQTDVFGFGILILEVLSGRRPIEE 571
           +      + D++  GI  +E+  G+ P  E
Sbjct: 170 NGKPYDYKADIWSLGITAIELAEGKPPYSE 199

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPKK, which itself is phosphorylated and activated by a MAPKKK. Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAPKKK to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. Other STE family members include p21-activated kinases (PAKs) and class III myosins, among others. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain, which can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, as well as autophosphorylate the C-terminal motor domain. They play an important role in maintaining the structural integrity of photoreceptor cell microvilli. Length = 253

>gnl|CDD|173755 cd08215, STKc_Nek, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

 Score =  119 bits (302), Expect = 3e-30
 Identities = 62/220 (28%), Positives = 104/220 (47%), Gaps = 11/220 (5%)

Query: 366 FSEENVIGVGGNGKVYKGVLEGGGAEIAVKRI--SHENDGGTRAFLAEISSLGRLKHKSL 423
           +     IG G  GKVY    +  G    +K I  S+ ++      L E+  L +L H ++
Sbjct: 2   YEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNI 61

Query: 424 VGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERI-RVLKDVAAGVLYLH 482
           +        EKG L +V +Y + G L + I +         EE+I      +   + YLH
Sbjct: 62  IKYYE-SFEEKGKLCIVMEYADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLH 120

Query: 483 EGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLAR-MHGHGQVASTTRVVGTVGYLAPEVF 541
               +K+LHRDIK  N+ L      +LGDFG+++ +     +A T  VVGT  YL+PE+ 
Sbjct: 121 S---RKILHRDIKPQNIFLTSNGLVKLGDFGISKVLSSTVDLAKT--VVGTPYYLSPELC 175

Query: 542 SSGRASTQTDVFGFGILILEVLSGRRPIE-EGKPNLVEMV 580
            +   + ++D++  G ++ E+ + + P E E    L   +
Sbjct: 176 QNKPYNYKSDIWSLGCVLYELCTLKHPFEGENLLELALKI 215

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Length = 258

>gnl|CDD|173728 cd06614, STKc_PAK, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

 Score =  113 bits (285), Expect = 7e-28
 Identities = 64/204 (31%), Positives = 98/204 (48%), Gaps = 10/204 (4%)

Query: 366 FSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVG 425
           +     IG G +G+VYK      G E+A+K++           + EI  +   KH ++V 
Sbjct: 21  YKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQN-KELIINEILIMKDCKHPNIVD 79

Query: 426 LRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERI-RVLKDVAAGVLYLHEG 484
                      L +V +YM+ GSL   I Q    M    E +I  V ++V  G+ YLH  
Sbjct: 80  YYD-SYLVGDELWVVMEYMDGGSLTDIITQNFVRMN---EPQIAYVCREVLQGLEYLHS- 134

Query: 485 WEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSG 544
             + V+HRDIKS N+LL K+ + +L DFG A      +    + VVGT  ++APEV    
Sbjct: 135 --QNVIHRDIKSDNILLSKDGSVKLADFGFAAQLTKEKSKRNS-VVGTPYWMAPEVIKRK 191

Query: 545 RASTQTDVFGFGILILEVLSGRRP 568
               + D++  GI+ +E+  G  P
Sbjct: 192 DYGPKVDIWSLGIMCIEMAEGEPP 215

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). Group II PAKs contain a PBD and a catalytic domain, but lack other motifs found in group I PAKs. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. Group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX; no such binding has been demonstrated for group II PAKs. Length = 286

>gnl|CDD|133171 cd05039, PTKc_Csk_like, Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

 Score =  112 bits (282), Expect = 8e-28
 Identities = 69/199 (34%), Positives = 108/199 (54%), Gaps = 15/199 (7%)

Query: 372 IGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGT-RAFLAEISSLGRLKHKSLVGLRGWC 430
           IG G  G V  G   G   ++AVK +  ++D    +AFLAE S +  L+H +LV L G  
Sbjct: 14  IGKGEFGDVMLGDYRG--QKVAVKCL--KDDSTAAQAFLAEASVMTTLRHPNLVQLLGVV 69

Query: 431 KREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVL 490
             +   L +V +YM  GSL  ++ +  G  +++  +++    DV  G+ YL E   K  +
Sbjct: 70  -LQGNPLYIVTEYMAKGSLVDYL-RSRGRAVITLAQQLGFALDVCEGMEYLEE---KNFV 124

Query: 491 HRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQT 550
           HRD+ + NVL+ +++  ++ DFGLA+    GQ +    V  T    APE     + ST++
Sbjct: 125 HRDLAARNVLVSEDLVAKVSDFGLAKEASQGQDSGKLPVKWT----APEALREKKFSTKS 180

Query: 551 DVFGFGILILEVLS-GRRP 568
           DV+ FGIL+ E+ S GR P
Sbjct: 181 DVWSFGILLWEIYSFGRVP 199

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As negative regulators of Src kinases, Csk and Chk play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Length = 256

>gnl|CDD|215061 PLN00113, PLN00113, leucine-rich repeat receptor-like protein kinase; Provisional

 Score =  118 bits (298), Expect = 2e-27
 Identities = 100/362 (27%), Positives = 178/362 (49%), Gaps = 36/362 (9%)

Query: 287 TSGLPSFVLPKDSIFKSKG--FIAGVTVGGLFIIVAVVLCSLFLIKRKQRRAREREEMED 344
           TSGLP    P   + K+    F    T+G  F+++A+V      I+ +     +R E ED
Sbjct: 613 TSGLP----PCKRVRKTPSWWFYITCTLGA-FLVLALVAFGFVFIRGRNNLELKRVENED 667

Query: 345 --WELEYWPHR----ITYQEIEAATKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRIS 398
             WEL+++  +    IT  +I ++ K   EENVI  G  G  YKG     G +  VK I+
Sbjct: 668 GTWELQFFDSKVSKSITINDILSSLK---EENVISRGKKGASYKGKSIKNGMQFVVKEIN 724

Query: 399 HENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDG 458
             N        +EI+ +G+L+H ++V L G C+ EKG+  L+++Y+E  +L + +     
Sbjct: 725 DVNS----IPSSEIADMGKLQHPNIVKLIGLCRSEKGA-YLIHEYIEGKNLSEVLRN--- 776

Query: 459 SMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMH 518
              LS E R ++   +A  + +LH      V+  ++    +++D +    L      R+ 
Sbjct: 777 ---LSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIIIDGKDEPHL------RLS 827

Query: 519 GHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIE---EGKPN 575
             G + + T+   +  Y+APE   +   + ++D++GFG++++E+L+G+ P +       +
Sbjct: 828 LPGLLCTDTKCFISSAYVAPETRETKDITEKSDIYGFGLILIELLTGKSPADAEFGVHGS 887

Query: 576 LVEMVWELMVQGKLLDALDARLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKV 635
           +VE          L   +D  +R     +++E+  V++L L C   DP ARP    V+K 
Sbjct: 888 IVEWARYCYSDCHLDMWIDPSIRGDVSVNQNEIVEVMNLALHCTATDPTARPCANDVLKT 947

Query: 636 LE 637
           LE
Sbjct: 948 LE 949

Length = 968

>gnl|CDD|173886 cd01951, lectin_L-type, legume lectins

 Score =  109 bits (275), Expect = 3e-27
 Identities = 72/257 (28%), Positives = 102/257 (39%), Gaps = 39/257 (15%)

Query: 22  SISAVDFVFNGFNSSNLSLYGTATV--ESRILTLTNSTTFTIGRALYPSKIPTKRPNSSY 79
           S++  +F  N  N SN  L G+AT+  +S +L LT  T    G A Y + I         
Sbjct: 2   SLNFSNFSNN--NQSNWQLNGSATLTTDSGVLRLTPDTGNQAGSAWYKTPIDLS------ 53

Query: 80  VYPFSTSFIFAMAPYKGVLAGHGLVFLFVPFHGIKGATEAQHLGLFNRTNDGNSSNHVFG 139
              F+T+F F +   KG     G+ F+            A   G            +   
Sbjct: 54  -KDFTTTFKFYL-GTKGTNGADGIAFVLQN-----DPAGALGGGGGGGGLGYGGIGNSVA 106

Query: 140 VEFDVFKNQEFNDIDENHVGIDVNSLTSVSAHAAGYWPDNQTDSSGSNSNSGTGDDEKSF 199
           VEFD +KN + ND + NH+ IDVN   + +A A          S GS S           
Sbjct: 107 VEFDTYKNDDNNDPNGNHISIDVNGNGNNTALAT---------SLGSASLPNGT------ 151

Query: 200 KELKLNNGKNYQVWIDYADSFINITMVE-AGMKRPKRPLLSVPLNLSGVLEDEMYVGFTA 258
                  G  + V I Y D   N   V            +++P++L  +   + Y GFTA
Sbjct: 152 -----GLGNEHTVRITY-DPTTNTLTVYLDNGSTLTSLDITIPVDLIQLGPTKAYFGFTA 205

Query: 259 ATGQLVESHKILAWSFS 275
           +TG L   H IL WSF+
Sbjct: 206 STGGLTNLHDILNWSFT 222

The L-type (legume-type) lectins are a highly diverse family of carbohydrate binding proteins that generally display no enzymatic activity toward the sugars they bind. This family includes arcelin, concanavalinA, the lectin-like receptor kinases, the ERGIC-53/VIP36/EMP46 type1 transmembrane proteins, and an alpha-amylase inhibitor. L-type lectins have a dome-shaped beta-barrel carbohydrate recognition domain with a curved seven-stranded beta-sheet referred to as the "front face" and a flat six-stranded beta-sheet referred to as the "back face". This domain homodimerizes so that adjacent back sheets form a contiguous 12-stranded sheet and homotetramers occur by a back-to-back association of these homodimers. Though L-type lectins exhibit both sequence and structural similarity to one another, their carbohydrate binding specificities differ widely. Length = 223

>gnl|CDD|133165 cd05033, PTKc_EphR, Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

 Score =  110 bits (278), Expect = 4e-27
 Identities = 82/278 (29%), Positives = 145/278 (52%), Gaps = 32/278 (11%)

Query: 369 ENVIGVGGNGKVYKGVLEGGGAE---IAVKRI-SHENDGGTRAFLAEISSLGRLKHKSLV 424
           E VIG G  G+V +G L+  G +   +A+K + +  +D     FL E S +G+  H +++
Sbjct: 9   EKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFDHPNII 68

Query: 425 GLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEG 484
            L G   + +  +M++ +YMENGSLDK++ + DG    +  + + +L+ +A+G+ YL E 
Sbjct: 69  RLEGVVTKSR-PVMIITEYMENGSLDKFLRENDGK--FTVGQLVGMLRGIASGMKYLSE- 124

Query: 485 WEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRVVG---TVGYLAPEVF 541
                +HRD+ + N+L++  +  ++ DFGL+R     +   TT+  G    + + APE  
Sbjct: 125 --MNYVHRDLAARNILVNSNLVCKVSDFGLSRRLEDSEATYTTK--GGKIPIRWTAPEAI 180

Query: 542 SSGRASTQTDVFGFGILILEVLS-GRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRAK 600
           +  + ++ +DV+ FGI++ EV+S G RP            W++  Q  ++ A++   R  
Sbjct: 181 AYRKFTSASDVWSFGIVMWEVMSYGERP-----------YWDMSNQ-DVIKAVEDGYRLP 228

Query: 601 GGFDEDEVERVLH-LGLLCAYPDPRARPTMRQVVKVLE 637
              D       L+ L L C   D   RPT  Q+V  L+
Sbjct: 229 PPMDCPS---ALYQLMLDCWQKDRNERPTFSQIVSTLD 263

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. This allows ephrin/EphR dimers to form, leading to the activation of the intracellular tyr kinase domain. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). The main effect of ephrin/EphR interaction is cell-cell repulsion or adhesion. Ephrin/EphR signaling is important in neural development and plasticity, cell morphogenesis and proliferation, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. Length = 266

>gnl|CDD|173733 cd07829, STKc_CDK_like, Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

 Score =  110 bits (278), Expect = 6e-27
 Identities = 63/208 (30%), Positives = 103/208 (49%), Gaps = 19/208 (9%)

Query: 366 FSEENVIGVGGNGKVYKGVLEGGGAEIAVK--RISHENDGGTRAFLAEISSLGRLKHKSL 423
           + +   +G G  G VYK   +  G  +A+K  R+ +E +G     L EIS L  LKH ++
Sbjct: 1   YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKELKHPNI 60

Query: 424 VGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVA----AGVL 479
           V L       +  L LV++Y +   L K++ +  G +         ++K +      G+ 
Sbjct: 61  VKLLDVI-HTERKLYLVFEYCDM-DLKKYLDKRPGPL------SPNLIKSIMYQLLRGLA 112

Query: 480 YLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPE 539
           Y H      +LHRD+K  N+L++++   +L DFGLAR  G      T  VV T+ Y APE
Sbjct: 113 YCHSHR---ILHRDLKPQNILINRDGVLKLADFGLARAFGIPLRTYTHEVV-TLWYRAPE 168

Query: 540 V-FSSGRASTQTDVFGFGILILEVLSGR 566
           +   S   ST  D++  G +  E+++G+
Sbjct: 169 ILLGSKHYSTAVDIWSVGCIFAEMITGK 196

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the early G1 phase by CDK4 or CDK6, the G1/S phase transition by CDK2, or the entry of mitosis by CDK1. They also exhibit overlapping cyclin specificity and functions in certain conditions. Knockout mice with a single CDK deleted remain viable with specific phenotypes, showing that some CDKs can compensate for each other. For example, CDK4 can compensate for the loss of CDK6, however, double knockout mice with both CDK4 and CDK6 deleted die in utero. CDK8 and CDK9 are mainly involved in transcription while CDK5 is implicated in neuronal function. CDK7 plays essential roles in both the cell cycle as a CDK-Activating Kinase (CAK) and in transcription as a component of the general transcription factor TFIIH. Length = 282

>gnl|CDD|132954 cd06623, PKc_MAPKK_plant_like, Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

 Score =  107 bits (269), Expect = 6e-26
 Identities = 73/272 (26%), Positives = 124/272 (45%), Gaps = 38/272 (13%)

Query: 371 VIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTR-AFLAEISSLGRLKHKSLVGLRGW 429
           V+G G +G VYK   +  G   A+K+I  + D   R   L E+ +L   +   +V   G 
Sbjct: 8   VLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFRKQLLRELKTLRSCESPYVVKCYGA 67

Query: 430 CKREKGSLMLVYDYMENGSLDKWIFQCDGSM---MLSCEERIRVLKDVAAGVLYLHEGWE 486
             +E G + +V +YM+ GSL   + +  G +   +L+      + + +  G+ YLH   +
Sbjct: 68  FYKE-GEISIVLEYMDGGSLAD-LLKKVGKIPEPVLAY-----IARQILKGLDYLHT--K 118

Query: 487 KKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRV-----VGTVGYLAPEVF 541
           + ++HRDIK SN+L++ +   ++ DFG+++      V   T       VGTV Y++PE  
Sbjct: 119 RHIIHRDIKPSNLLINSKGEVKIADFGISK------VLENTLDQCNTFVGTVTYMSPERI 172

Query: 542 SSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRAKG 601
                S   D++  G+ +LE   G+ P     P      +ELM    + D     L A+ 
Sbjct: 173 QGESYSYAADIWSLGLTLLECALGKFPF---LPPGQPSFFELMQA--ICDGPPPSLPAEE 227

Query: 602 GFDE--DEVERVLHLGLLCAYPDPRARPTMRQ 631
              E  D +   L         DP+ RP+  +
Sbjct: 228 FSPEFRDFISACLQ-------KDPKKRPSAAE 252

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include MAPKKs from plants, kinetoplastids, alveolates, and mycetozoa. The MAPKK, LmxPK4, from Leishmania mexicana, is important in differentiation and virulence. Dictyostelium discoideum MEK1 is required for proper chemotaxis. MEK1 null mutants display severe defects in cell polarization and directional movement. Plants contain multiple MAPKKs like other eukaryotes. The Arabidopsis genome encodes for 10 MAPKKs while poplar and rice contain 13 MAPKKs each. The functions of these proteins have not been fully elucidated. There is evidence to suggest that MAPK cascades are involved in plant stress responses. In Arabidopsis, MKK3 plays a role in pathogen signaling, MKK2 is involved in cold and salt stress signaling, MKK4/MKK5 participates in innate immunity, and MKK7 regulates basal and systemic acquired resistance. Length = 264

>gnl|CDD|133194 cd05063, PTKc_EphR_A2, Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

 Score =  107 bits (268), Expect = 8e-26
 Identities = 78/278 (28%), Positives = 140/278 (50%), Gaps = 27/278 (9%)

Query: 367 SEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRA----FLAEISSLGRLKHKS 422
           +++ VIG G  G+V++G+L+  G +     I     G T      FL+E S +G+  H +
Sbjct: 8   TKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSHHN 67

Query: 423 LVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLH 482
           ++ L G   + K   M++ +YMENG+LDK++   DG    S  + + +L+ +AAG+ YL 
Sbjct: 68  IIRLEGVVTKFK-PAMIITEYMENGALDKYLRDHDGE--FSSYQLVGMLRGIAAGMKYLS 124

Query: 483 EGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRVVGTVG--YLAPEV 540
           +      +HRD+ + N+L++  +  ++ DFGL+R+       + T   G +   + APE 
Sbjct: 125 D---MNYVHRDLAARNILVNSNLECKVSDFGLSRVLEDDPEGTYTTSGGKIPIRWTAPEA 181

Query: 541 FSSGRASTQTDVFGFGILILEVLS-GRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRA 599
            +  + ++ +DV+ FGI++ EV+S G RP            W++    +++ A++   R 
Sbjct: 182 IAYRKFTSASDVWSFGIVMWEVMSFGERP-----------YWDMSNH-EVMKAINDGFRL 229

Query: 600 KGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLE 637
               D      V  L L C   D   RP    +V +L+
Sbjct: 230 PAPMDCPSA--VYQLMLQCWQQDRARRPRFVDIVNLLD 265

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. The EphA2 receptor is overexpressed in tumor cells and tumor blood vessels in a variety of cancers including breast, prostate, lung, and colon. As a result, it is an attractive target for drug design since its inhibition could affect several aspects of tumor progression. Length = 268

>gnl|CDD|173628 cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

 Score =  105 bits (265), Expect = 3e-25
 Identities = 73/286 (25%), Positives = 136/286 (47%), Gaps = 32/286 (11%)

Query: 370 NVIGVGGNGKVYKGVLE----GGGAEIAVKRISHENDGGTRA-FLAEISSLGRLKHKSLV 424
             +G G  GKV     +      G ++AVK ++H  +   R+ F  EI  L  L H+++V
Sbjct: 10  KQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLDHENIV 69

Query: 425 GLRGWCKREKG-SLMLVYDYMENGSLDKWI----FQCDGSMMLSCEERIRVLKDVAAGVL 479
             +G C++  G SL L+ +Y+ +GSL  ++     Q +   +L    +I        G+ 
Sbjct: 70  KYKGVCEKPGGRSLRLIMEYLPSGSLRDYLQRHRDQINLKRLLLFSSQI------CKGMD 123

Query: 480 YLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRVVGT--VGYLA 537
           YL     ++ +HRD+ + N+L++ E   ++ DFGLA++    +     +  G   + + A
Sbjct: 124 YLGS---QRYIHRDLAARNILVESEDLVKISDFGLAKVLPEDKDYYYVKEPGESPIFWYA 180

Query: 538 PEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMV---WELMVQGKLLDALD 594
           PE   + + S+ +DV+ FG+ + E+ +   P +      + M+      M+  +LL+ L 
Sbjct: 181 PECLRTSKFSSASDVWSFGVTLYELFTYGDPSQSPPAEFLRMIGIAQGQMIVTRLLELLK 240

Query: 595 --ARL-RAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLE 637
              RL R     DE     V  L  LC   +P+ RP+   ++ +++
Sbjct: 241 EGERLPRPPSCPDE-----VYDLMKLCWEAEPQDRPSFADLILIVD 281

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jaks are also involved in regulating the surface expression of some cytokine receptors. The Jak-STAT pathway is involved in many biological processes including hematopoiesis, immunoregulation, host defense, fertility, lactation, growth, and embryogenesis. Length = 284

>gnl|CDD|223589 COG0515, SPS1, Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

 Score =  106 bits (265), Expect = 9e-25
 Identities = 74/284 (26%), Positives = 125/284 (44%), Gaps = 24/284 (8%)

Query: 365 GFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHE---NDGGTRAFLAEISSLGRLKH- 420
            +     +G G  G+VY          +A+K ++ +          FL EI  L  L H 
Sbjct: 1   SYRILRKLGEGSFGEVYLARDR---KLVALKVLAKKLESKSKEVERFLREIQILASLNHP 57

Query: 421 KSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLY 480
            ++V L     +++GSL LV +Y++ GSL+  + +      LS  E + +L  + + + Y
Sbjct: 58  PNIVKLYD-FFQDEGSLYLVMEYVDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEY 116

Query: 481 LHEGWEKKVLHRDIKSSNVLLDKEMN-GRLGDFGLAR-----MHGHGQVASTTRVVGTVG 534
           LH    K ++HRDIK  N+LLD++    +L DFGLA+            A  +  VGT G
Sbjct: 117 LH---SKGIIHRDIKPENILLDRDGRVVKLIDFGLAKLLPDPGSTSSIPALPSTSVGTPG 173

Query: 535 YLAPEVFSS---GRASTQTDVFGFGILILEVLSGRRPIE-EGKPNLVEMVWELMVQGKLL 590
           Y+APEV        AS+ +D++  GI + E+L+G  P E E   +      +++++    
Sbjct: 174 YMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQTLKIILELPTP 233

Query: 591 DALDARLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVK 634
                   +           +L   L     DP+ R +    + 
Sbjct: 234 SLASPLSPSNPELISKAASDLLKKLLA---KDPKNRLSSSSDLS 274

Length = 384

>gnl|CDD|132943 cd06612, STKc_MST1_2, Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

 Score =  103 bits (260), Expect = 9e-25
 Identities = 62/219 (28%), Positives = 100/219 (45%), Gaps = 29/219 (13%)

Query: 366 FSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVG 425
           F     +G G  G VYK + +  G  +A+K +    +   +  + EIS L +     +V 
Sbjct: 5   FDILEKLGEGSYGSVYKAIHKETGQVVAIKVV--PVEEDLQEIIKEISILKQCDSPYIVK 62

Query: 426 LRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSC-----EERIR-VLKDVAAGVL 479
             G    +   L +V +Y   GS+       D  +M        EE I  +L     G+ 
Sbjct: 63  YYG-SYFKNTDLWIVMEYCGAGSV------SD--IMKITNKTLTEEEIAAILYQTLKGLE 113

Query: 480 YLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTR----VVGTVGY 535
           YLH     K +HRDIK+ N+LL++E   +L DFG++     GQ+  T      V+GT  +
Sbjct: 114 YLHS---NKKIHRDIKAGNILLNEEGQAKLADFGVS-----GQLTDTMAKRNTVIGTPFW 165

Query: 536 LAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKP 574
           +APEV      + + D++  GI  +E+  G+ P  +  P
Sbjct: 166 MAPEVIQEIGYNNKADIWSLGITAIEMAEGKPPYSDIHP 204

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a MAPK kinase) and MEKK1 (a MAPK kinase kinase) by acting as a MAPK kinase kinase kinase (MAPKKKK). Activation of JNK by MST1 leads to caspase activation and apoptosis. MST1 has also been implicated in cell proliferation and differentiation. Krs1 may regulate cell growth arrest and apoptosis in response to cellular stress. Length = 256

>gnl|CDD|133213 cd05082, PTKc_Csk, Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

 Score =  103 bits (259), Expect = 9e-25
 Identities = 86/272 (31%), Positives = 134/272 (49%), Gaps = 31/272 (11%)

Query: 369 ENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRG 428
              IG G  G V  G  +  G ++AVK I  +ND   +AFLAE S + +L+H +LV L G
Sbjct: 11  LQTIGKGEFGDVMLG--DYRGNKVAVKCI--KNDATAQAFLAEASVMTQLRHSNLVQLLG 66

Query: 429 WCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKK 488
               EKG L +V +YM  GSL  ++ +  G  +L  +  ++   DV   + YL       
Sbjct: 67  VIVEEKGGLYIVTEYMAKGSLVDYL-RSRGRSVLGGDCLLKFSLDVCEAMEYLEA---NN 122

Query: 489 VLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRVVGT--VGYLAPEVFSSGRA 546
            +HRD+ + NVL+ ++   ++ DFGL +       AS+T+  G   V + APE     + 
Sbjct: 123 FVHRDLAARNVLVSEDNVAKVSDFGLTKE------ASSTQDTGKLPVKWTAPEALREKKF 176

Query: 547 STQTDVFGFGILILEVLS-GRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRAKGGFDE 605
           ST++DV+ FGIL+ E+ S GR P    +  L ++V  +  +G  +DA D           
Sbjct: 177 STKSDVWSFGILLWEIYSFGRVPYP--RIPLKDVVPRVE-KGYKMDAPDGC--------- 224

Query: 606 DEVERVLHLGLLCAYPDPRARPTMRQVVKVLE 637
                V  +   C + D   RP+  Q+ + LE
Sbjct: 225 --PPVVYDVMKQCWHLDAATRPSFLQLREQLE 254

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Csk is expressed in a wide variety of tissues. As a negative regulator of Src, Csk plays a role in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. In addition, Csk also shows Src-independent functions. It is a critical component in G-protein signaling, and plays a role in cytoskeletal reorganization and cell migration. Length = 256

>gnl|CDD|173638 cd05065, PTKc_EphR_B, Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors

 Score =  103 bits (257), Expect = 2e-24
 Identities = 83/282 (29%), Positives = 145/282 (51%), Gaps = 31/282 (10%)

Query: 369 ENVIGVGGNGKVYKGVLEGGGAE---IAVKRI-SHENDGGTRAFLAEISSLGRLKHKSLV 424
           E VIG G  G+V +G L+  G     +A+K + S   +   R FL+E S +G+  H +++
Sbjct: 9   EEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNII 68

Query: 425 GLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEG 484
            L G   + +  +M++ ++MENG+LD ++ Q DG    +  + + +L+ +AAG+ YL E 
Sbjct: 69  HLEGVVTKSR-PVMIITEFMENGALDSFLRQNDGQ--FTVIQLVGMLRGIAAGMKYLSE- 124

Query: 485 WEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVAST-TRVVG---TVGYLAPEV 540
                +HRD+ + N+L++  +  ++ DFGL+R         T T  +G    + + APE 
Sbjct: 125 --MNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSSLGGKIPIRWTAPEA 182

Query: 541 FSSGRASTQTDVFGFGILILEVLS-GRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRA 599
            +  + ++ +DV+ +GI++ EV+S G RP            W++  Q  +++A++   R 
Sbjct: 183 IAYRKFTSASDVWSYGIVMWEVMSYGERP-----------YWDMSNQ-DVINAIEQDYRL 230

Query: 600 KGGFDEDEVERVLH-LGLLCAYPDPRARPTMRQVVKVLEGKI 640
               D       LH L L C   D  ARP   Q+V  L+  I
Sbjct: 231 PPPMD---CPTALHQLMLDCWQKDRNARPKFGQIVSTLDKMI 269

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion. EphBRs play important roles in synapse formation and plasticity, spine morphogenesis, axon guidance, and angiogenesis. In the intestinal epithelium, EphBRs are Wnt signaling target genes that control cell compartmentalization. They function as suppressors of color cancer progression. Length = 269

>gnl|CDD|173669 cd05578, STKc_Yank1, Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

 Score =  102 bits (256), Expect = 3e-24
 Identities = 63/211 (29%), Positives = 91/211 (43%), Gaps = 16/211 (7%)

Query: 365 GFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRIS---HENDGGTRAFLAEISSLGRLKHK 421
            F    VIG G  GKV            A+K ++       G  R  L E   L  L H 
Sbjct: 1   HFELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHP 60

Query: 422 SLVGLR-GWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRV-LKDVAAGVL 479
            LV L   +   E   + LV D +  G L   + Q     +   EE+++  + ++   + 
Sbjct: 61  FLVNLWYSFQDEEN--MYLVVDLLLGGDLRYHLSQ----KVKFSEEQVKFWICEIVLALE 114

Query: 480 YLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPE 539
           YLH    K ++HRDIK  N+LLD++ +  + DF +A       +  TT   GT GY+APE
Sbjct: 115 YLHS---KGIIHRDIKPDNILLDEQGHVHITDFNIATKVTPDTL--TTSTSGTPGYMAPE 169

Query: 540 VFSSGRASTQTDVFGFGILILEVLSGRRPIE 570
           V      S   D +  G+   E L G+RP  
Sbjct: 170 VLCRQGYSVAVDWWSLGVTAYECLRGKRPYR 200

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A. Length = 258

>gnl|CDD|173757 cd08217, STKc_Nek2, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

 Score =  100 bits (252), Expect = 1e-23
 Identities = 63/210 (30%), Positives = 99/210 (47%), Gaps = 13/210 (6%)

Query: 370 NVIGVGGNGKVYKGVLEGGGAEIAVKRISHEN-DGGTRAFL-AEISSLGRLKHKSLVGLR 427
             IG G  G V K   +  G  +  K I + N     +  L +E++ L  LKH ++V   
Sbjct: 6   ETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIVRYY 65

Query: 428 GWCK-REKGSLMLVYDYMENGSLDKWIFQC--DGSMMLSCEER--IRVLKDVAAGVLYLH 482
                R   +L +V +Y E G L + I +C  +   +   EE    R+L  +   +   H
Sbjct: 66  DRIIDRSNQTLYIVMEYCEGGDLAQLIQKCKKERKYI---EEEFIWRILTQLLLALYECH 122

Query: 483 EGWEKK--VLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEV 540
              +    VLHRD+K +N+ LD   N +LGDFGLA++ GH    + T  VGT  Y++PE 
Sbjct: 123 NRSDPGNTVLHRDLKPANIFLDANNNVKLGDFGLAKILGHDSSFAKT-YVGTPYYMSPEQ 181

Query: 541 FSSGRASTQTDVFGFGILILEVLSGRRPIE 570
            +      ++D++  G LI E+ +   P  
Sbjct: 182 LNHMSYDEKSDIWSLGCLIYELCALSPPFT 211

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exit. NIMA is involved in nuclear membrane fission. Vertebrate Nek2 is a cell cycle-regulated STK, localized in centrosomes and kinetochores, that regulates centrosome splitting at the G2/M phase. It also interacts with other mitotic kinases such as Polo-like kinase 1 and may play a role in spindle checkpoint. An increase in the expression of the human NEK2 gene is strongly associated with the progression of non-Hodgkin lymphoma. Length = 265

>gnl|CDD|173639 cd05066, PTKc_EphR_A, Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors

 Score = 99.6 bits (248), Expect = 3e-23
 Identities = 83/280 (29%), Positives = 144/280 (51%), Gaps = 29/280 (10%)

Query: 369 ENVIGVGGNGKVYKGVLEGGGAE---IAVKRI-SHENDGGTRAFLAEISSLGRLKHKSLV 424
           E VIG G  G+V  G L+  G     +A+K + +   +   R FL+E S +G+  H +++
Sbjct: 9   EKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNII 68

Query: 425 GLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEG 484
            L G   + K  +M+V +YMENGSLD ++ + DG   +   + + +L+ +A+G+ YL   
Sbjct: 69  HLEGVVTKSK-PVMIVTEYMENGSLDAFLRKHDGQFTVI--QLVGMLRGIASGMKYLS-- 123

Query: 485 WEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRVVGT--VGYLAPEVFS 542
            +   +HRD+ + N+L++  +  ++ DFGL+R+      A+ T   G   + + APE  +
Sbjct: 124 -DMGYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAIA 182

Query: 543 SGRASTQTDVFGFGILILEVLS-GRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRAKG 601
             + ++ +DV+ +GI++ EV+S G RP            WE+  Q  ++ A++   R   
Sbjct: 183 YRKFTSASDVWSYGIVMWEVMSYGERP-----------YWEMSNQ-DVIKAIEEGYRLPA 230

Query: 602 GFDEDEVERVLH-LGLLCAYPDPRARPTMRQVVKVLEGKI 640
             D       LH L L C   D   RP   Q+V +L+  I
Sbjct: 231 PMD---CPAALHQLMLDCWQKDRNERPKFEQIVSILDKLI 267

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. EphARs and ephrin-A ligands are expressed in multiple areas of the developing brain, especially in the retina and tectum. They are part of a system controlling retinotectal mapping. Length = 267

>gnl|CDD|173771 cd08529, STKc_FA2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

 Score = 98.7 bits (246), Expect = 4e-23
 Identities = 65/209 (31%), Positives = 106/209 (50%), Gaps = 12/209 (5%)

Query: 366 FSEENVIGVGGNGKVYKGVLEGGGAEIAVKRI--SHENDGGTRAFLAEISSLGRLKHKSL 423
           F   N IG G  G V+K V +      A+K+I  S  N       + E   L +L    +
Sbjct: 2   FEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYI 61

Query: 424 VGLRGW-CKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERI-RVLKDVAAGVLYL 481
           +  R +    +KG L +V +Y ENG L K +    G  +   E+++ R    +  G+ +L
Sbjct: 62  I--RYYESFLDKGKLNIVMEYAENGDLHKLLKMQRGRPL--PEDQVWRFFIQILLGLAHL 117

Query: 482 HEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVF 541
           H    KK+LHRDIKS N+ LD   N ++GD G+A++       + T +VGT  YL+PE+ 
Sbjct: 118 HS---KKILHRDIKSLNLFLDAYDNVKIGDLGVAKLLSDNTNFANT-IVGTPYYLSPELC 173

Query: 542 SSGRASTQTDVFGFGILILEVLSGRRPIE 570
                + ++DV+  G+++ E  +G+ P +
Sbjct: 174 EDKPYNEKSDVWALGVVLYECCTGKHPFD 202

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cycle progression. No cellular function has yet been ascribed to CNK4. Length = 256

>gnl|CDD|133214 cd05083, PTKc_Chk, Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

 Score = 98.5 bits (245), Expect = 5e-23
 Identities = 66/199 (33%), Positives = 111/199 (55%), Gaps = 15/199 (7%)

Query: 371 VIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWC 430
           +IG G  G V +G  E  G ++AVK I  + D   +AFL E + + +L HK+LV L G  
Sbjct: 13  IIGEGEFGAVLQG--EYTGQKVAVKNI--KCDVTAQAFLEETAVMTKLHHKNLVRLLGVI 68

Query: 431 KREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVL 490
                 L +V + M  G+L  ++ +  G  ++S  + ++   DVA G+ YL     KK++
Sbjct: 69  LHN--GLYIVMELMSKGNLVNFL-RTRGRALVSVIQLLQFSLDVAEGMEYLES---KKLV 122

Query: 491 HRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQT 550
           HRD+ + N+L+ ++   ++ DFGLAR+   G     +++   V + APE     + S+++
Sbjct: 123 HRDLAARNILVSEDGVAKVSDFGLARVGSMG--VDNSKL--PVKWTAPEALKHKKFSSKS 178

Query: 551 DVFGFGILILEVLS-GRRP 568
           DV+ +G+L+ EV S GR P
Sbjct: 179 DVWSYGVLLWEVFSYGRAP 197

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As a negative regulator of Src kinases, Chk may play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Chk is expressed in brain and hematopoietic cells. Studies in mice reveal that Chk is not functionally redundant with Csk and that it plays an important role as a regulator of immune responses. Chk also plays a role in neural differentiation in a manner independent of Src by enhancing Mapk activation via Ras-mediated signaling. Length = 254

>gnl|CDD|133191 cd05060, PTKc_Syk_like, Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

 Score = 98.6 bits (246), Expect = 5e-23
 Identities = 70/217 (32%), Positives = 108/217 (49%), Gaps = 16/217 (7%)

Query: 372 IGVGGNGKVYKGV-LEGGGAEI--AVKRISHE-NDGGTRAFLAEISSLGRLKHKSLVGLR 427
           +G G  G V KGV L   G E+  AVK +  E    G + FL E S + +L H  +V L 
Sbjct: 3   LGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCIVRLI 62

Query: 428 GWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEK 487
           G CK E   LMLV +    G L K++ +    + +S  +   +   VA G+ YL     K
Sbjct: 63  GVCKGE--PLMLVMELAPLGPLLKYLKK-RREIPVS--DLKELAHQVAMGMAYLES---K 114

Query: 488 KVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRVVGT--VGYLAPEVFSSGR 545
             +HRD+ + NVLL      ++ DFG++R  G G         G   + + APE  + G+
Sbjct: 115 HFVHRDLAARNVLLVNRHQAKISDFGMSRALGAGSDYYRATTAGRWPLKWYAPECINYGK 174

Query: 546 ASTQTDVFGFGILILEVLS-GRRPIEEGK-PNLVEMV 580
            S+++DV+ +G+ + E  S G +P  E K   ++ M+
Sbjct: 175 FSSKSDVWSYGVTLWEAFSYGAKPYGEMKGAEVIAML 211

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, migration, and phagocytosis. Syk is important in B-cell receptor (BCR) signaling, while Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Syk also plays a central role in Fc receptor-mediated phagocytosis in the adaptive immune system. Shark is exclusively expressed in ectodermally derived epithelia, and is localized preferentially to the apical surface of the epithelial cells, it may play a role in a signaling pathway for epithelial cell polarity. Length = 257

>gnl|CDD|143371 cd07866, STKc_BUR1, Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

 Score = 98.5 bits (246), Expect = 1e-22
 Identities = 73/243 (30%), Positives = 119/243 (48%), Gaps = 45/243 (18%)

Query: 372 IGVGGNGKVYKGVLEGGGAEIAVKRI--SHENDGGTRAFLAEISSLGRLKHKSLVGL--- 426
           +G G  G+VYK      G  +A+K+I   +E DG     L EI  L +LKH ++V L   
Sbjct: 16  LGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKLKHPNVVPLIDM 75

Query: 427 ----RGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRV--------LKDV 474
                   KR++GS+ +V  YM++          D S +L     +++        +  +
Sbjct: 76  AVERPDKSKRKRGSVYMVTPYMDH----------DLSGLLE-NPSVKLTESQIKCYMLQL 124

Query: 475 AAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLAR-------MHGHGQVAST- 526
             G+ YLHE     +LHRDIK++N+L+D +   ++ DFGLAR           G    T 
Sbjct: 125 LEGINYLHE---NHILHRDIKAANILIDNQGILKIADFGLARPYDGPPPNPKGGGGGGTR 181

Query: 527 --TRVVGTVGYLAPE-VFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNL--VEMVW 581
             T +V T  Y  PE +    R +T  D++G G +  E+ + RRPI +GK ++  + +++
Sbjct: 182 KYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFT-RRPILQGKSDIDQLHLIF 240

Query: 582 ELM 584
           +L 
Sbjct: 241 KLC 243

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic screen as factors involved in general transcription. The BUR1/BUR2 complex phosphorylates the C-terminal domain of RNA polymerase II. In addition, this complex regulates histone modification by phosporylating Rad6 and mediating the association of the Paf1 complex with chromatin. Length = 311

>gnl|CDD|132952 cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

 Score = 98.3 bits (245), Expect = 1e-22
 Identities = 69/223 (30%), Positives = 101/223 (45%), Gaps = 20/223 (8%)

Query: 364 KGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRIS-HENDGGTRAFLAEISSLGRLKHKS 422
           +   E + +G G  G V K  L+  G   A+K I+   N    +  L E+      K   
Sbjct: 1   EKIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPNPDLQKQILRELEINKSCKSPY 60

Query: 423 LVGLRGWCKREK-GSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERI--RVLKDVAAGVL 479
           +V   G    E   S+ +  +Y E GSLD          +     RI  +VL  +A  VL
Sbjct: 61  IVKYYGAFLDESSSSIGIAMEYCEGGSLDSI-----YKKVKKRGGRIGEKVLGKIAESVL 115

Query: 480 ----YLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGY 535
               YLH    +K++HRDIK SN+LL ++   +L DFG++    +    + T   GT  Y
Sbjct: 116 KGLSYLHS---RKIIHRDIKPSNILLTRKGQVKLCDFGVSGELVNSLAGTFT---GTSFY 169

Query: 536 LAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIE-EGKPNLV 577
           +APE       S  +DV+  G+ +LEV   R P   EG+P L 
Sbjct: 170 MAPERIQGKPYSITSDVWSLGLTLLEVAQNRFPFPPEGEPPLG 212

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Pek1/Skh1 from Schizosaccharomyces pombe and MKK2 from Saccharomyces cerevisiae, and related proteins. Both fission yeast Pek1 and baker's yeast MKK2 are components of the cell integrity MAPK pathway. In fission yeast, Pek1 phosphorylates and activates the MAPK Pmk1/Spm1 and is regulated by the MAPKKK Mkh1. In baker's yeast, the pathway involves the MAPK Slt2, the MAPKKs MKK1 and MKK2, and the MAPKKK Bck1. The cell integrity MAPK cascade is activated by multiple stress conditions, and is essential in cell wall construction, morphogenesis, cytokinesis, and ion homeostasis. Length = 287

>gnl|CDD|133243 cd05112, PTKc_Itk, Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

 Score = 96.6 bits (240), Expect = 3e-22
 Identities = 65/200 (32%), Positives = 102/200 (51%), Gaps = 9/200 (4%)

Query: 372 IGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCK 431
           IG G  G V+ G       ++A+K I  E       F+ E   + +L H  LV L G C 
Sbjct: 12  IGSGQFGLVWLGYWLEK-RKVAIKTI-REGAMSEEDFIEEAQVMMKLSHPKLVQLYGVCT 69

Query: 432 REKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLH 491
            E+  + LV+++ME+G L  ++    G    S E  + +  DV  G+ YL       V+H
Sbjct: 70  -ERSPICLVFEFMEHGCLSDYLRAQRGK--FSQETLLGMCLDVCEGMAYLESS---NVIH 123

Query: 492 RDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTD 551
           RD+ + N L+ +    ++ DFG+ R     Q  S+T     V + +PEVFS  + S+++D
Sbjct: 124 RDLAARNCLVGENQVVKVSDFGMTRFVLDDQYTSSTGTKFPVKWSSPEVFSFSKYSSKSD 183

Query: 552 VFGFGILILEVLS-GRRPIE 570
           V+ FG+L+ EV S G+ P E
Sbjct: 184 VWSFGVLMWEVFSEGKTPYE 203

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Itk contains the Tec homology (TH) domain containing one proline-rich region and a zinc-binding region. Tec kinases are expressed mainly by haematopoietic cells. Itk is expressed in T-cells and mast cells, and is important in their development and differentiation. Of the three Tec kinases expressed in T-cells, Itk plays the predominant role in T-cell receptor (TCR) signaling. It is activated by phosphorylation upon TCR crosslinking and is involved in the pathway resulting in phospholipase C-gamma1 activation and actin polymerization. It also plays a role in the downstream signaling of the T-cell costimulatory receptor CD28, the T-cell surface receptor CD2, and the chemokine receptor CXCR4. In addition, Itk is crucial for the development of T-helper(Th)2 effector responses. Length = 256

>gnl|CDD|133248 cd05148, PTKc_Srm_Brk, Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

 Score = 96.0 bits (239), Expect = 5e-22
 Identities = 62/207 (29%), Positives = 112/207 (54%), Gaps = 10/207 (4%)

Query: 366 FSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVG 425
           F+ E  +G G  G+V++G L      +A+K +  ++    + F  E+ +L RL+HK L+ 
Sbjct: 8   FTLERKLGSGYFGEVWEG-LWKNRVRVAIKILKSDDLLKQQDFQKEVQALKRLRHKHLIS 66

Query: 426 LRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGW 485
           L   C   +  + ++ + ME GSL  ++   +G + L     I +   VA G+ YL E  
Sbjct: 67  LFAVCSVGE-PVYIITELMEKGSLLAFLRSPEGQV-LPVASLIDMACQVAEGMAYLEE-- 122

Query: 486 EKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHG-QVASTTRVVGTVGYLAPEVFSSG 544
            +  +HRD+ + N+L+ +++  ++ DFGLAR+      ++S  ++     + APE  S G
Sbjct: 123 -QNSIHRDLAARNILVGEDLVCKVADFGLARLIKEDVYLSSDKKI--PYKWTAPEAASHG 179

Query: 545 RASTQTDVFGFGILILEVLS-GRRPIE 570
             ST++DV+ FGIL+ E+ + G+ P  
Sbjct: 180 TFSTKSDVWSFGILLYEMFTYGQVPYP 206

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Srm and Brk however, lack the N-terminal myristylation sites. Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Brk has been found to be overexpressed in a majority of breast tumors. Length = 261

>gnl|CDD|173723 cd06605, PKc_MAPKK, Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

 Score = 95.8 bits (239), Expect = 6e-22
 Identities = 82/275 (29%), Positives = 128/275 (46%), Gaps = 41/275 (14%)

Query: 370 NVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTR-AFLAEISSLGRLKHKSLVGLRG 428
             +G G +G V K +    G  +AVK I  E +   +   L E+  L +     +VG  G
Sbjct: 7   GELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINEAIQKQILRELDILHKCNSPYIVGFYG 66

Query: 429 WCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVL----YLHEG 484
                 G + +  +YM+ GSLDK + +  G +     ERI  L  +A  VL    YLHE 
Sbjct: 67  AFYNN-GDISICMEYMDGGSLDKILKEVQGRI----PERI--LGKIAVAVLKGLTYLHE- 118

Query: 485 WEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQ----VASTTRVVGTVGYLAPEV 540
            + K++HRD+K SN+L++     +L DFG++     GQ    +A T   VGT  Y+APE 
Sbjct: 119 -KHKIIHRDVKPSNILVNSRGQIKLCDFGVS-----GQLVNSLAKTF--VGTSSYMAPER 170

Query: 541 FSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLV-EMVWELM---VQGKLLDALDAR 596
                 S ++D++  G+ ++E+ +GR P      N   + ++EL+   V           
Sbjct: 171 IQGNDYSVKSDIWSLGLSLIELATGRFPY--PPENDPPDGIFELLQYIVNE------PPP 222

Query: 597 LRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQ 631
               G F  D  + V     LC   DPR RP+ ++
Sbjct: 223 RLPSGKFSPDFQDFV----NLCLIKDPRERPSYKE 253

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity PKs that phosphorylate their downstream targets, MAPKs, at specific threonine and tyrosine residues. There are three MAPK subfamilies: extracellular signal-regulated kinase (ERK), c-Jun N-terminal kinase (JNK), and p38. In mammalian cells, there are seven MAPKKs (named MKK1-7) and 20 MAPKKKs. Each MAPK subfamily can be activated by at least two cognate MAPKKs and by multiple MAPKKKs. Length = 265

>gnl|CDD|143333 cd05118, STKc_CMGC, Catalytic domain of CMGC family Serine/Threonine Kinases

 Score = 94.7 bits (236), Expect = 2e-21
 Identities = 71/206 (34%), Positives = 101/206 (49%), Gaps = 14/206 (6%)

Query: 372 IGVGGNGKVYKGVLEGGGAEIAVKRIS--HENDGGTRAFLAEISSLGRLKHKSLVGLRGW 429
           IG G  G VYK   +  G  +A+K+I    E++G  +  L EI  L  L H +++ L   
Sbjct: 7   IGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLLD- 65

Query: 430 CKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIR-VLKDVAAGVLYLHEGWEKK 488
             R KG L LV+++M+   L K I           E  I+  L  +  G+ + H      
Sbjct: 66  VFRHKGDLYLVFEFMDT-DLYKLI---KDRQRGLPESLIKSYLYQLLQGLAFCHSHG--- 118

Query: 489 VLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEV-FSSGRAS 547
           +LHRD+K  N+L++ E   +L DFGLAR  G   V   T  V T  Y APE+       S
Sbjct: 119 ILHRDLKPENLLINTEGVLKLADFGLARSFG-SPVRPYTHYVVTRWYRAPELLLGDKGYS 177

Query: 548 TQTDVFGFGILILEVLSGRRPIEEGK 573
           T  D++  G +  E+LS RRP+  GK
Sbjct: 178 TPVDIWSVGCIFAELLS-RRPLFPGK 202

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Length = 283

>gnl|CDD|173660 cd05123, STKc_AGC, Catalytic domain of AGC family Protein Serine/Threonine Kinases

 Score = 92.2 bits (230), Expect = 7e-21
 Identities = 58/201 (28%), Positives = 91/201 (45%), Gaps = 13/201 (6%)

Query: 372 IGVGGNGKVYKGVLEGGGAEIAVKRISHEN---DGGTRAFLAEISSLGRLKHKSLVGLRG 428
           +G G  GKV     +  G   A+K +  +           L E + L R+ H  +V L  
Sbjct: 1   LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLH- 59

Query: 429 WCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRV-LKDVAAGVLYLHEGWEK 487
           +  + +  L LV +Y   G L   + +       S EER R    ++   + YLH     
Sbjct: 60  YAFQTEEKLYLVLEYAPGGELFSHLSKE---GRFS-EERARFYAAEIVLALEYLHS---L 112

Query: 488 KVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRAS 547
            +++RD+K  N+LLD + + +L DFGLA+        + T   GT  YLAPEV       
Sbjct: 113 GIIYRDLKPENILLDADGHIKLTDFGLAKELSSEGSRTNT-FCGTPEYLAPEVLLGKGYG 171

Query: 548 TQTDVFGFGILILEVLSGRRP 568
              D +  G+L+ E+L+G+ P
Sbjct: 172 KAVDWWSLGVLLYEMLTGKPP 192

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the turn motif. Phosphorylation at the A-loop is required of most AGC kinases, which results in a disorder-to-order transition of the A-loop. The ordered conformation results in the access of substrates and ATP to the active site. A subset of AGC kinases with C-terminal extensions containing the HM also requires phosphorylation at this site. Phosphorylation at the HM allows the C-terminal extension to form an ordered structure that packs into the hydrophobic pocket of the catalytic domain, which then reconfigures the kinase into an active bi-lobed state. In addition, growth factor-activated AGC kinases such as PKB, p70S6K, RSK, MSK, PKC, and SGK, require phosphorylation at the turn motif (also called tail or zipper site), located N-terminal to the HM at the C-terminal extension. AGC kinases regulate many cellular processes including division, growth, survival, metabolism, motility, and differentiation. Many are implicated in the development of various human diseases. Length = 250

>gnl|CDD|133179 cd05048, PTKc_Ror, Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

 Score = 92.1 bits (229), Expect = 1e-20
 Identities = 60/232 (25%), Positives = 114/232 (49%), Gaps = 27/232 (11%)

Query: 358 EIEAATKGFSEENVIGVGGNGKVYKGVLEGGGAE-----IAVKRISHENDGGTRA-FLAE 411
           EI  +   F EE  +G G  GKVYKG L G         +A+K +    +   +  F  E
Sbjct: 1   EIPLSAVRFLEE--LGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQE 58

Query: 412 ISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQ-------------CDG 458
              +  L+H ++V L G C +E+ + ML ++Y+ +G L +++ +                
Sbjct: 59  AELMSDLQHPNIVCLLGVCTKEQPTCML-FEYLAHGDLHEFLVRNSPHSDVGAESGDETV 117

Query: 459 SMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLAR-M 517
              L C + + +   +AAG+ YL        +HRD+ + N L+ + +  ++ DFGL+R +
Sbjct: 118 KSSLDCSDFLHIAIQIAAGMEYLSS---HHFVHRDLAARNCLVGEGLTVKISDFGLSRDI 174

Query: 518 HGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLS-GRRP 568
           +        ++ +  V ++ PE    G+ +T++D++ FG+++ E+ S G +P
Sbjct: 175 YSADYYRVQSKSLLPVRWMPPEAILYGKFTTESDIWSFGVVLWEIFSYGLQP 226

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror kinases are expressed in many tissues during development. They play important roles in bone and heart formation. Mutations in human Ror2 result in two different bone development genetic disorders, recessive Robinow syndrome and brachydactyly type B. Drosophila Ror is expressed only in the developing nervous system during neurite outgrowth and neuronal differentiation, suggesting a role for Drosophila Ror in neural development. More recently, mouse Ror1 and Ror2 have also been found to play an important role in regulating neurite growth in central neurons. Ror1 and Ror2 are believed to have some overlapping and redundant functions. Length = 283

>gnl|CDD|133199 cd05068, PTKc_Frk_like, Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

 Score = 90.6 bits (225), Expect = 3e-20
 Identities = 73/264 (27%), Positives = 124/264 (46%), Gaps = 34/264 (12%)

Query: 372 IGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGT---RAFLAEISSLGRLKHKSLVGLRG 428
           +G G  G+V++G+       +AVK +      GT   + FLAE   + +L+H  L+ L  
Sbjct: 14  LGAGQFGEVWEGLWNNT-TPVAVKTLK----PGTMDPKDFLAEAQIMKKLRHPKLIQLYA 68

Query: 429 WCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKK 488
            C  E+  + +V + M+ GSL +++ Q      L   + I +   VA+G+ YL     + 
Sbjct: 69  VCTLEE-PIYIVTELMKYGSLLEYL-QGGAGRALKLPQLIDMAAQVASGMAYLEA---QN 123

Query: 489 VLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRAST 548
            +HRD+ + NVL+ +    ++ DFGLAR+       +       + + APE     R S 
Sbjct: 124 YIHRDLAARNVLVGENNICKVADFGLARVIKEDIYEAREGAKFPIKWTAPEAALYNRFSI 183

Query: 549 QTDVFGFGILILEVLS-GRRPIEEGKPNLVEMVWELMVQGKLLDALDA--RLRAKGGFDE 605
           ++DV+ FGIL+ E+++ GR P            +  M   ++L  +D   R+    G   
Sbjct: 184 KSDVWSFGILLTEIVTYGRMP------------YPGMTNAEVLQQVDQGYRMPCPPG--- 228

Query: 606 DEVERVLH-LGLLCAYPDPRARPT 628
               + L+ + L C   DP  RPT
Sbjct: 229 --CPKELYDIMLDCWKEDPDDRPT 250

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Frk, also known as Rak, is specifically expressed in liver, lung, kidney, intestine, mammary glands, and the islets of Langerhans. Rodent homologs were previously referred to as GTK (gastrointestinal tyr kinase), BSK (beta-cell Src-like kinase), or IYK (intestinal tyr kinase). Studies in mice reveal that Frk is not essential for viability. It plays a role in the signaling that leads to cytokine-induced beta-cell death in Type I diabetes. It also regulates beta-cell number during embryogenesis and early in life. Length = 261

>gnl|CDD|173625 cd05032, PTKc_InsR_like, Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

 Score = 90.9 bits (226), Expect = 4e-20
 Identities = 66/281 (23%), Positives = 134/281 (47%), Gaps = 33/281 (11%)

Query: 372 IGVGGNGKVYKGVLEG-----GGAEIAVKRIS-HENDGGTRAFLAEISSLGRLKHKSLVG 425
           +G G  G VY+G+ +G         +A+K ++ + +      FL E S +       +V 
Sbjct: 14  LGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEFNCHHVVR 73

Query: 426 LRGWCKREKGSLMLVYDYMENGSLDKWI-------FQCDGSMMLSCEERIRVLKDVAAGV 478
           L G     + + ++V + M  G L  ++           G    + ++ I++  ++A G+
Sbjct: 74  LLGVVSTGQPT-LVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGM 132

Query: 479 LYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLAR-MHGHGQVASTTRVVGTVGYLA 537
            YL     KK +HRD+ + N ++ +++  ++GDFG+ R ++         + +  V ++A
Sbjct: 133 AYLAA---KKFVHRDLAARNCMVAEDLTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMA 189

Query: 538 PEVFSSGRASTQTDVFGFGILILEVLS-GRRPIEEGKPNLVEMVWELMVQGKLLDALDAR 596
           PE    G  +T++DV+ FG+++ E+ +   +P  +G  N  E V + ++ G  LD     
Sbjct: 190 PESLKDGVFTTKSDVWSFGVVLWEMATLAEQPY-QGLSN--EEVLKFVIDGGHLD----- 241

Query: 597 LRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLE 637
                   E+  +++L L  +C   +P+ RPT  ++V  L+
Sbjct: 242 ------LPENCPDKLLELMRMCWQYNPKMRPTFLEIVSSLK 276

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR and IGF-1R, which share 84% sequence identity in their kinase domains, display physiologically distinct yet overlapping functions in cell growth, differentiation, and metabolism. InsR activation leads primarily to metabolic effects while IGF-1R activation stimulates mitogenic pathways. In cells expressing both receptors, InsR/IGF-1R hybrids are found together with classical receptors. Both receptors can interact with common adaptor molecules such as IRS-1 and IRS-2. Length = 277

>gnl|CDD|132957 cd06626, STKc_MEKK4, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

 Score = 90.5 bits (225), Expect = 4e-20
 Identities = 74/231 (32%), Positives = 108/231 (46%), Gaps = 36/231 (15%)

Query: 370 NVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLA---EISSLGRLKHKSLVGL 426
           N IG G  GKVY  V    G  +AVK I  + D   +       E+  L  LKH +LV  
Sbjct: 6   NKIGGGTFGKVYTAVNLDTGELMAVKEIRIQ-DNDPKTIKEIADEMKVLELLKHPNLVKY 64

Query: 427 RGW-CKREKGSLMLVYDYME---NGSLDKWIFQCDGSMMLSCEERIRVL-KDVAAGVLYL 481
            G    REK     VY +ME    G+L++     +   +L  E  IRV    +  G+ YL
Sbjct: 65  YGVEVHREK-----VYIFMEYCSGGTLEEL---LEHGRILD-EHVIRVYTLQLLEGLAYL 115

Query: 482 HEGWEKKVLHRDIKSSNVLLDKEMNG--RLGDFGLARMHGHGQVASTTRVVGTVG---YL 536
           H      ++HRDIK +N+ LD   NG  +LGDFG A    +        V    G   Y+
Sbjct: 116 HS---HGIVHRDIKPANIFLDH--NGVIKLGDFGCAVKLKNNTTTMGEEVQSLAGTPAYM 170

Query: 537 APEVFSSGRASTQ---TDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELM 584
           APEV + G+        D++  G ++LE+ +G+RP  E     ++  +++M
Sbjct: 171 APEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSE-----LDNEFQIM 216

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. MEKK4 also plays roles in the re-polarization of the actin cytoskeleton in response to osmotic stress, in the proper closure of the neural tube, in cardiovascular development, and in immune responses. Length = 264

>gnl|CDD|133211 cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

 Score = 90.3 bits (224), Expect = 6e-20
 Identities = 74/278 (26%), Positives = 130/278 (46%), Gaps = 20/278 (7%)

Query: 371 VIGVGGNGKV----YKGVLEGGGAEIAVKRISHENDGGTRA-FLAEISSLGRLKHKSLVG 425
           V+G G  GKV    Y    +G G  +AVK +  E      + +  EI+ L  L H+++V 
Sbjct: 11  VLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTLYHENIVK 70

Query: 426 LRGWCKREKG-SLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEG 484
            +G C  + G  L L+ +Y+  GSL  ++ +      L+  + +   + +  G+ YLH  
Sbjct: 71  YKGCCSEQGGKGLQLIMEYVPLGSLRDYLPKHK----LNLAQLLLFAQQICEGMAYLHS- 125

Query: 485 WEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRVVGT--VGYLAPEVFS 542
             +  +HRD+ + NVLLD +   ++GDFGLA+    G      R  G   V + A E   
Sbjct: 126 --QHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAVECLK 183

Query: 543 SGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMV---WELMVQGKLLDALDARLRA 599
             + S  +DV+ FG+ + E+L+     +       EM+      M   +L++ L+  +R 
Sbjct: 184 ENKFSYASDVWSFGVTLYELLTHCDSKQSPPKKFEEMIGPKQGQMTVVRLIELLERGMRL 243

Query: 600 KGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLE 637
                ++  + V  L   C   + + RPT R ++ +L+
Sbjct: 244 PC--PKNCPQEVYILMKNCWETEAKFRPTFRSLIPILK 279

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Tyk2 is widely expressed in many tissues. It is involved in signaling via the cytokine receptors IFN-alphabeta, IL-6, IL-10, IL-12, IL-13, and IL-23. It mediates cell surface urokinase receptor (uPAR) signaling and plays a role in modulating vascular smooth muscle cell (VSMC) functional behavior in response to injury. Tyk2 is also important in dendritic cell function and T helper (Th)1 cell differentiation. A homozygous mutation of Tyk2 was found in a patient with hyper-IgE syndrome (HIES), a primary immunodeficiency characterized by recurrent skin abscesses, pneumonia, and elevated serum IgE. This suggests that Tyk2 may play important roles in multiple cytokine signaling involved in innate and adaptive immunity. Length = 283

>gnl|CDD|143346 cd07841, STKc_CDK7, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

 Score = 89.9 bits (224), Expect = 9e-20
 Identities = 66/213 (30%), Positives = 99/213 (46%), Gaps = 33/213 (15%)

Query: 372 IGVGGNGKVYKGVLEGGGAEIAVKRI-----SHENDGGTRAFLAEISSLGRLKHKSLVGL 426
           +G G    VYK   +  G  +A+K+I         DG     L EI  L  LKH +++GL
Sbjct: 8   LGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGL 67

Query: 427 RGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLK--DVAA-------G 477
                  K ++ LV+++ME   L+K I           +++  VL   D+ +       G
Sbjct: 68  LD-VFGHKSNINLVFEFME-TDLEKVI-----------KDKSIVLTPADIKSYMLMTLRG 114

Query: 478 VLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLA 537
           + YLH  W   +LHRD+K +N+L+  +   +L DFGLAR  G      T +VV T  Y A
Sbjct: 115 LEYLHSNW---ILHRDLKPNNLLIASDGVLKLADFGLARSFGSPNRKMTHQVV-TRWYRA 170

Query: 538 PEVFSSGRA-STQTDVFGFGILILEVLSGRRPI 569
           PE+    R      D++  G +  E+L  R P 
Sbjct: 171 PELLFGARHYGVGVDMWSVGCIFAELLL-RVPF 202

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is also a component of the general transcription factor TFIIH, which phosphorylates the C-terminal domain (CTD) of RNA polymerase II when it is bound with unphosphorylated DNA, as present in the pre-initiation complex. Following phosphorylation, the CTD dissociates from the DNA which allows transcription initiation. Length = 298

>gnl|CDD|173726 cd06610, STKc_OSR1_SPAK, Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

 Score = 89.3 bits (222), Expect = 1e-19
 Identities = 67/221 (30%), Positives = 102/221 (46%), Gaps = 21/221 (9%)

Query: 370 NVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLA-EISSLGRLKHKSLVGLRG 428
            VIGVG    VY  +      ++A+KRI  E    +   L  E+ ++ +  H ++V    
Sbjct: 7   EVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQTSVDELRKEVQAMSQCNHPNVVKY-- 64

Query: 429 WCK-REKGSLMLVYDYMENGS-LD--KWIFQCDGSMMLSCEERI--RVLKDVAAGVLYLH 482
           +        L LV  Y+  GS LD  K  +   G      +E I   VLK+V  G+ YLH
Sbjct: 65  YTSFVVGDELWLVMPYLSGGSLLDIMKSSYPRGGL-----DEAIIATVLKEVLKGLEYLH 119

Query: 483 EGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGL-ARMHGHGQVASTTR--VVGTVGYLAPE 539
                  +HRDIK+ N+LL ++ + ++ DFG+ A +   G      R   VGT  ++APE
Sbjct: 120 S---NGQIHRDIKAGNILLGEDGSVKIADFGVSASLADGGDRTRKVRKTFVGTPCWMAPE 176

Query: 540 VFSSGRASTQ-TDVFGFGILILEVLSGRRPIEEGKPNLVEM 579
           V           D++ FGI  +E+ +G  P  +  P  V M
Sbjct: 177 VMEQVHGYDFKADIWSFGITAIELATGAAPYSKYPPMKVLM 217

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1 and SPAK contain a conserved C-terminal (CCT) domain, which recognizes a unique motif ([RK]FX[VI]) present in their activating kinases (WNK1/WNK4) and their substrates. Length = 267

>gnl|CDD|173637 cd05059, PTKc_Tec_like, Catalytic domain of Tec-like Protein Tyrosine Kinases

 Score = 89.0 bits (221), Expect = 1e-19
 Identities = 74/265 (27%), Positives = 122/265 (46%), Gaps = 21/265 (7%)

Query: 372 IGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCK 431
           +G G  G V+ G   G   ++A+K I  E       F+ E   + +L H +LV L G C 
Sbjct: 12  LGSGQFGVVHLGKWRGK-IDVAIKMI-REGAMSEDDFIEEAKVMMKLSHPNLVQLYGVCT 69

Query: 432 REKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLH 491
           +++  + +V +YM NG L  ++ +  G   L  E  + +  DV   + YL        +H
Sbjct: 70  KQR-PIFIVTEYMANGCLLNYLRERKG--KLGTEWLLDMCSDVCEAMEYLES---NGFIH 123

Query: 492 RDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTD 551
           RD+ + N L+ ++   ++ DFGLAR     Q  S+      V +  PEVF   R S+++D
Sbjct: 124 RDLAARNCLVGEDNVVKVSDFGLARYVLDDQYTSSQGTKFPVKWAPPEVFDYSRFSSKSD 183

Query: 552 VFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRAKGGFDEDEVERV 611
           V+ FG+L+ EV S  +   E   N    V E +  G  L     +L         EV  +
Sbjct: 184 VWSFGVLMWEVFSEGKMPYERFSNS--EVVESVSAGYRLY--RPKLAPT------EVYTI 233

Query: 612 LHLGLLCAYPDPRARPTMRQVVKVL 636
           ++    C +  P  RP  ++++  L
Sbjct: 234 MY---SCWHEKPEDRPAFKKLLSQL 255

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, some members contain the Tec homology (TH) domain, which contains proline-rich and zinc-binding regions. Tec kinases form the second largest subfamily of nRTKs and are expressed mainly by haematopoietic cells, although Tec and Bmx are also found in endothelial cells. B-cells express Btk and Tec, while T-cells express Itk, Txk, and Tec. Collectively, Tec kinases are expressed in a variety of myeloid cells such as mast cells, platelets, macrophages, and dendritic cells. Each Tec kinase shows a distinct cell-type pattern of expression. The function of Tec kinases in lymphoid cells have been studied extensively. They play important roles in the development, differentiation, maturation, regulation, survival, and function of B-cells and T-cells. Mutations in Btk cause the severe B-cell immunodeficiency, X-linked agammaglobulinaemia (XLA). Length = 256

>gnl|CDD|173645 cd05084, PTKc_Fes, Catalytic domain of the Protein Tyrosine Kinase, Fes

 Score = 88.5 bits (219), Expect = 1e-19
 Identities = 79/269 (29%), Positives = 126/269 (46%), Gaps = 25/269 (9%)

Query: 372 IGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRA-FLAEISSLGRLKHKSLVGLRGWC 430
           IG G  G+V+ G L      +AVK          +A FL E   L +  H ++V L G C
Sbjct: 3   IGRGNFGEVFSGRLRADNTPVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVC 62

Query: 431 KREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVL 490
             +K  + +V + ++ G    ++ + +G   L  +E I+++++ AAG+ YL     K  +
Sbjct: 63  T-QKQPIYIVMELVQGGDFLTFL-RTEGPR-LKVKELIQMVENAAAGMEYLES---KHCI 116

Query: 491 HRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRVVGT-VGYLAPEVFSSGRASTQ 549
           HRD+ + N L+ ++   ++ DFG++R    G  AST  +    V + APE  + GR S++
Sbjct: 117 HRDLAARNCLVTEKNVLKISDFGMSREEEDGVYASTGGMKQIPVKWTAPEALNYGRYSSE 176

Query: 550 TDVFGFGILILEVLS-GRRPIEEGKPNLV-EMVWELMVQGKLLDALDARLRAKGGFDEDE 607
           +DV+ FGIL+ E  S G  P      NL  +   E + QG  L              E  
Sbjct: 177 SDVWSFGILLWEAFSLGAVPY----ANLSNQQTREAIEQGVRLPC-----------PELC 221

Query: 608 VERVLHLGLLCAYPDPRARPTMRQVVKVL 636
            + V  L   C   DP  RP+   V + L
Sbjct: 222 PDAVYRLMERCWEYDPGQRPSFSTVHQEL 250

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular endothelial, epithelial, and neuronal cells. It plays important roles in cell growth and differentiation, angiogenesis, inflammation and immunity, and cytoskeletal regulation. A recent study implicates Fes kinase as a tumor suppressor in colorectal cancer. Length = 252

>gnl|CDD|173752 cd07861, STKc_CDK1_euk, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

 Score = 89.0 bits (221), Expect = 2e-19
 Identities = 67/204 (32%), Positives = 106/204 (51%), Gaps = 10/204 (4%)

Query: 372 IGVGGNGKVYKGVLEGGGAEIAVKRISHEN--DGGTRAFLAEISSLGRLKHKSLVGLRGW 429
           IG G  G VYKG  +  G  +A+K+I  E+  +G     + EIS L  L+H ++V L+  
Sbjct: 8   IGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNIVCLQDV 67

Query: 430 CKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKV 489
             +E   L L+++++    L K++        +  E     L  +  G+L+ H    ++V
Sbjct: 68  LMQES-RLYLIFEFLSM-DLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHS---RRV 122

Query: 490 LHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVF-SSGRAST 548
           LHRD+K  N+L+D +   +L DFGLAR  G      T  VV T+ Y APEV   S R ST
Sbjct: 123 LHRDLKPQNLLIDNKGVIKLADFGLARAFGIPVRVYTHEVV-TLWYRAPEVLLGSPRYST 181

Query: 549 QTDVFGFGILILEVLSGRRPIEEG 572
             D++  G +  E+ + ++P+  G
Sbjct: 182 PVDIWSIGTIFAEMAT-KKPLFHG 204

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 phase entry and progression. CDK1/cyclin A2 has also been implicated as an important regulator of S phase events. The CDK1/cyclin B complex is critical for G2 to M phase transition. It induces mitosis by activating nuclear enzymes that regulate chromatin condensation, nuclear membrane degradation, mitosis-specific microtubule and cytoskeletal reorganization. CDK1 also associates with cyclin E and plays a role in the entry into S phase. CDK1 transcription is stable throughout the cell cycle but is modulated in some pathological conditions. It may play a role in regulating apoptosis under these conditions. In breast cancer cells, HER2 can mediate apoptosis by inactivating CDK1. Activation of CDK1 may contribute to HIV-1 induced apoptosis and neuronal apoptosis in neurodegenerative diseases. Length = 285

>gnl|CDD|173629 cd05041, PTKc_Fes_like, Catalytic domain of Fes-like Protein Tyrosine Kinases

 Score = 87.9 bits (218), Expect = 2e-19
 Identities = 60/197 (30%), Positives = 103/197 (52%), Gaps = 11/197 (5%)

Query: 372 IGVGGNGKVYKGVLEGGGAEIAVKRISHEN-DGGTRAFLAEISSLGRLKHKSLVGLRGWC 430
           IG G  G VYKGVL+G   E+AVK           R FL E   L +  H ++V L G C
Sbjct: 3   IGKGNFGDVYKGVLKGNT-EVAVKTCRSTLPPDLKRKFLQEAEILKQYDHPNIVKLIGVC 61

Query: 431 KREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVL 490
             +K  + +V + +  GSL  ++ +    + +  ++ +++  D AAG+ YL     K  +
Sbjct: 62  V-QKQPIYIVMELVPGGSLLTFLRKKKNRLTV--KKLLQMSLDAAAGMEYLES---KNCI 115

Query: 491 HRDIKSSNVLLDKEMNGRLGDFGLARMHGHG--QVASTTRVVGTVGYLAPEVFSSGRAST 548
           HRD+ + N L+ +    ++ DFG++R    G   V+   + +  + + APE  + GR ++
Sbjct: 116 HRDLAARNCLVGENNVLKISDFGMSREEEGGIYTVSDGLKQI-PIKWTAPEALNYGRYTS 174

Query: 549 QTDVFGFGILILEVLSG 565
           ++DV+ +GIL+ E  S 
Sbjct: 175 ESDVWSYGILLWETFSL 191

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes and Fer kinases play roles in haematopoiesis, inflammation and immunity, growth factor signaling, cytoskeletal regulation, cell migration and adhesion, and the regulation of cell-cell interactions. Fes and Fer show redundancy in their biological functions. Length = 251

>gnl|CDD|173640 cd05067, PTKc_Lck_Blk, Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

 Score = 88.0 bits (218), Expect = 2e-19
 Identities = 57/198 (28%), Positives = 109/198 (55%), Gaps = 9/198 (4%)

Query: 372 IGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCK 431
           +G G  G+V+ G   G   ++A+K +  +      AFLAE + + +L+H  LV L     
Sbjct: 14  LGAGQFGEVWMGYYNGH-TKVAIKSLK-QGSMSPEAFLAEANLMKQLQHPRLVRLYAVVT 71

Query: 432 REKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLH 491
           +E   + ++ +YMENGSL  ++   +G   L+  + I +   +A G+ ++     K  +H
Sbjct: 72  QE--PIYIITEYMENGSLVDFLKTPEGIK-LTINKLIDMAAQIAEGMAFIER---KNYIH 125

Query: 492 RDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTD 551
           RD++++N+L+ + +  ++ DFGLAR+    +  +       + + APE  + G  + ++D
Sbjct: 126 RDLRAANILVSETLCCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSD 185

Query: 552 VFGFGILILEVLS-GRRP 568
           V+ FGIL+ E+++ GR P
Sbjct: 186 VWSFGILLTEIVTYGRIP 203

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lck is expressed in T-cells and natural killer (NK) cells. It plays a critical role in T-cell maturation, activation, and T-cell receptor (TCR) signaling. Lck phosphorylates ITAM (immunoreceptor tyr activation motif) sequences on several subunits of TCRs, leading to the activation of different second messenger cascades. Phosphorylated ITAMs serve as binding sites for other signaling factor such as Syk and ZAP-70, leading to their activation and propagation of downstream events. In addition, Lck regulates drug-induced apoptosis by interfering with the mitochondrial death pathway. The apototic role of Lck is independent of its primary function in T-cell signaling. Blk is expressed specifically in B-cells. It is involved in pre-BCR (B-cell receptor) signaling. Length = 260

>gnl|CDD|133168 cd05036, PTKc_ALK_LTK, Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

 Score = 87.5 bits (217), Expect = 4e-19
 Identities = 71/283 (25%), Positives = 124/283 (43%), Gaps = 33/283 (11%)

Query: 370 NVIGVGGNGKVYKGVLEGGGAE-----IAVKRISHENDGGTRA-FLAEISSLGRLKHKSL 423
             +G G  G+VY+G+  G   +     +AVK +         + FL E   + +  H+++
Sbjct: 12  RALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKFNHQNI 71

Query: 424 VGLRGWCKREKGSLMLVYDYMENGSLDKWIFQC----DGSMMLSCEERIRVLKDVAAGVL 479
           V L G    E+    ++ + M  G L  ++ +     +    L+ ++ +   +DVA G  
Sbjct: 72  VRLIGVS-FERLPRFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCK 130

Query: 480 YLHEGWEKKVLHRDIKSSNVLLDKEMNGR---LGDFGLAR-MHGHGQVASTTRVVGTVGY 535
           YL E      +HRDI + N LL  +  GR   + DFG+AR ++         R +  + +
Sbjct: 131 YLEE---NHFIHRDIAARNCLLTCKGPGRVAKIADFGMARDIYRASYYRKGGRAMLPIKW 187

Query: 536 LAPEVFSSGRASTQTDVFGFGILILEVLS-GRRPIEEGKPNLVEMVWELMVQGKLLDALD 594
           + PE F  G  +++TDV+ FG+L+ E+ S G  P   G+ N  + V E +  G       
Sbjct: 188 MPPEAFLDGIFTSKTDVWSFGVLLWEIFSLGYMPY-PGRTN--QEVMEFVTGG------- 237

Query: 595 ARLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLE 637
            RL    G        V  +   C    P  RP    +++ ++
Sbjct: 238 GRLDPPKGCP----GPVYRIMTDCWQHTPEDRPNFATILERIQ 276

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well as visceral muscle differentiation in Drosophila. ALK is aberrantly expressed as fusion proteins, due to chromosomal translocations, in about 60% of anaplastic large cell lymphomas (ALCLs). ALK fusion proteins are also found in rare cases of diffuse large B cell lymphomas (DLBCLs). LTK is mainly expressed in B lymphocytes and neuronal tissues. It is important in cell proliferation and survival. Transgenic mice expressing TLK display retarded growth and high mortality rate. In addition, a polymorphism in mouse and human LTK is implicated in the pathogenesis of systemic lupus erythematosus. Length = 277

>gnl|CDD|173749 cd07855, STKc_ERK5, Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

 Score = 88.2 bits (219), Expect = 6e-19
 Identities = 69/219 (31%), Positives = 103/219 (47%), Gaps = 21/219 (9%)

Query: 366 FSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRA--FLAEISSLGRLKHKSL 423
           +     IG G  G V   +    G ++A+K+I H  D  T A   L E+  L   KH ++
Sbjct: 7   YKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKHDNI 66

Query: 424 VGLRGWCKREKGSLM----LVYDYMENGSLDKWIFQCDGSMMLSCEERIR-VLKDVAAGV 478
           + +R    R  G+      +V D ME+  L   I   D  +    EE IR  L  +  G+
Sbjct: 67  IAIRD-ILRPPGADFKDVYVVMDLMES-DLHH-IIHSDQPLT---EEHIRYFLYQLLRGL 120

Query: 479 LYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVAST---TRVVGTVGY 535
            Y+H      V+HRD+K SN+L++++   R+GDFG+AR             T  V T  Y
Sbjct: 121 KYIHSA---NVIHRDLKPSNLLVNEDCELRIGDFGMARGLSSSPTEHKYFMTEYVATRWY 177

Query: 536 LAPEV-FSSGRASTQTDVFGFGILILEVLSGRRPIEEGK 573
            APE+  S    +T  D++  G +  E+L GRR +  GK
Sbjct: 178 RAPELLLSLPEYTTAIDMWSVGCIFAEML-GRRQLFPGK 215

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the MAP2K MEK5, which in turn is regulated by the MAP3Ks MEKK2 and MEKK3. Activated ERK5 phosphorylates its targets including myocyte enhancer factor 2 (MEF2), Sap1a, c-Myc, and RSK. It plays a role in EGF-induced cell proliferation during the G1/S phase transition. Studies on knockout mice revealed that ERK5 is essential for cardiovascular development and plays an important role in angiogenesis. It is also critical for neural differentiation and survival. The ERK5 pathway has been implicated in the pathogenesis of many diseases including cancer, cardiac hypertrophy, and atherosclerosis. Length = 334

>gnl|CDD|133180 cd05049, PTKc_Trk, Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

 Score = 87.1 bits (216), Expect = 6e-19
 Identities = 75/291 (25%), Positives = 137/291 (47%), Gaps = 47/291 (16%)

Query: 371 VIGVGGNGKVYKGVLEGGGAE-----IAVKRISHENDGGTRA-FLAEISSLGRLKHKSLV 424
            +G G  GKV+ G       E     +AVK +        R  F  E   L   +H+++V
Sbjct: 12  ELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQHENIV 71

Query: 425 GLRGWCKREKGSLMLVYDYMENGSLDKW---------IFQCDGSMM--LSCEERIRVLKD 473
              G C       ++V++YME+G L+K+           +   S M  L+  + +++   
Sbjct: 72  KFYGVCTEG-DPPIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQ 130

Query: 474 VAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTT--RVVG 531
           +A+G++YL     +  +HRD+ + N L+  ++  ++GDFG++R      V +T   RV G
Sbjct: 131 IASGMVYLA---SQHFVHRDLATRNCLVGYDLVVKIGDFGMSR-----DVYTTDYYRVGG 182

Query: 532 T----VGYLAPEVFSSGRASTQTDVFGFGILILEVLS-GRRPIEEGKPNLVEMVWELMVQ 586
                + ++ PE     + +T++DV+ FG+++ E+ + G++P   G  N  E V E + Q
Sbjct: 183 HTMLPIRWMPPESIMYRKFTTESDVWSFGVVLWEIFTYGKQPW-YGLSN--EEVIECITQ 239

Query: 587 GKLLDALDARLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLE 637
           G+LL       R +    E     V  + L C   DP+ R  ++ + + L+
Sbjct: 240 GRLLQ------RPRTCPSE-----VYDIMLGCWKRDPQQRINIKDIHERLQ 279

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalytic domain. Trk receptors are mainly expressed in the peripheral and central nervous systems. They play important roles in cell fate determination, neuronal survival and differentiation, as well as in the regulation of synaptic plasticity. Altered expression of Trk receptors is associated with many human diseases. Length = 280

>gnl|CDD|215036 PLN00034, PLN00034, mitogen-activated protein kinase kinase; Provisional

 Score = 88.3 bits (219), Expect = 7e-19
 Identities = 68/230 (29%), Positives = 110/230 (47%), Gaps = 37/230 (16%)

Query: 361 AATKGFSE---ENVIGVGGNGKVYKGVLEGGGAEIAVKRI--SHENDGGTRAFLAEISSL 415
           +A K  SE    N IG G  G VYK +    G   A+K I  +HE D   R    EI  L
Sbjct: 68  SAAKSLSELERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNHE-DTVRRQICREIEIL 126

Query: 416 GRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVA 475
             + H ++V          G + ++ ++M+ GSL+       G+ +   +    V + + 
Sbjct: 127 RDVNHPNVVKCHDMFDH-NGEIQVLLEFMDGGSLE-------GTHIADEQFLADVARQIL 178

Query: 476 AGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVAST----TRVVG 531
           +G+ YLH    + ++HRDIK SN+L++   N ++ DFG++R+     +A T       VG
Sbjct: 179 SGIAYLHR---RHIVHRDIKPSNLLINSAKNVKIADFGVSRI-----LAQTMDPCNSSVG 230

Query: 532 TVGYLAPEVFSS--------GRASTQTDVFGFGILILEVLSGRRPIEEGK 573
           T+ Y++PE  ++        G A    D++  G+ ILE   GR P   G+
Sbjct: 231 TIAYMSPERINTDLNHGAYDGYAG---DIWSLGVSILEFYLGRFPFGVGR 277

Length = 353

>gnl|CDD|132963 cd06632, STKc_MEKK1_plant, Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

 Score = 86.3 bits (214), Expect = 9e-19
 Identities = 77/273 (28%), Positives = 133/273 (48%), Gaps = 36/273 (13%)

Query: 372 IGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGT-----RAFLAEISSLGRLKHKSLVGL 426
           +G G  G VY+G+    G   AVK +S  +DG T     +    EI+ L +L+H ++V  
Sbjct: 8   LGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQY 67

Query: 427 RGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVL-KDVAAGVLYLHEGW 485
            G  +RE+ +L +  + +  GSL K + +  GS     E  IR+  + +  G+ YLH+  
Sbjct: 68  LG-TEREEDNLYIFLELVPGGSLAK-LLKKYGSFP---EPVIRLYTRQILLGLEYLHD-- 120

Query: 486 EKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQV---ASTTRVVGTVGYLAPEVF- 541
            +  +HRDIK +N+L+D     +L DFG+A+     QV   +      G+  ++APEV  
Sbjct: 121 -RNTVHRDIKGANILVDTNGVVKLADFGMAK-----QVVEFSFAKSFKGSPYWMAPEVIA 174

Query: 542 SSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRAKG 601
             G      D++  G  +LE+ +G+ P  + +   V  V+++  + K L  +   L  + 
Sbjct: 175 QQGGYGLAADIWSLGCTVLEMATGKPPWSQLEG--VAAVFKI-GRSKELPPIPDHLSDEA 231

Query: 602 GFDEDEVERVLHLGLLCAYPDPRARPTMRQVVK 634
              +D +       L C   DP  RPT  ++++
Sbjct: 232 ---KDFI-------LKCLQRDPSLRPTAAELLE 254

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidopsis thaliana MEKK1 activates MPK4, a MAPK that regulates systemic acquired resistance. MEKK1 also participates in the regulation of temperature-sensitive and tissue-specific cell death. Length = 258

>gnl|CDD|173626 cd05034, PTKc_Src_like, Catalytic domain of Src kinase-like Protein Tyrosine Kinases

 Score = 85.8 bits (213), Expect = 1e-18
 Identities = 71/268 (26%), Positives = 128/268 (47%), Gaps = 24/268 (8%)

Query: 372 IGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCK 431
           +G G  G+V+ G   G   ++AVK +         AFL E   + +L+H  LV L   C 
Sbjct: 14  LGAGQFGEVWMGTWNGT-TKVAVKTLK-PGTMSPEAFLQEAQIMKKLRHDKLVQLYAVCS 71

Query: 432 REKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLH 491
            E+  + +V +YM  GSL  ++   +G   L   + + +   +A G+ YL     +  +H
Sbjct: 72  EEE-PIYIVTEYMSKGSLLDFLKSGEGKK-LRLPQLVDMAAQIAEGMAYLES---RNYIH 126

Query: 492 RDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTD 551
           RD+ + N+L+ + +  ++ DFGLAR+    +  +       + + APE  + GR + ++D
Sbjct: 127 RDLAARNILVGENLVCKIADFGLARLIEDDEYTAREGAKFPIKWTAPEAANYGRFTIKSD 186

Query: 552 VFGFGILILEVLS-GRRPIEEGKPNLVEMVWELMVQGKLLDALDARLR-AKGGFDEDEVE 609
           V+ FGIL+ E+++ GR P            +  M   ++L+ ++   R  +     +E+ 
Sbjct: 187 VWSFGILLTEIVTYGRVP------------YPGMTNREVLEQVERGYRMPRPPNCPEELY 234

Query: 610 RVLHLGLLCAYPDPRARPTMRQVVKVLE 637
            ++   L C   DP  RPT   +   LE
Sbjct: 235 DLM---LQCWDKDPEERPTFEYLQSFLE 259

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. They were identified as the first proto-oncogene products, and they regulate cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Src kinases are overexpressed in a variety of human cancers, making them attractive targets for therapy. They are also implicated in acute inflammatory responses and osteoclast function. Src, Fyn, Yes, and Yrk are widely expressed, while Blk, Lck, Hck, Fgr, and Lyn show a limited expression pattern. Length = 261

>gnl|CDD|173753 cd07864, STKc_CDK12, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

 Score = 86.8 bits (215), Expect = 1e-18
 Identities = 67/226 (29%), Positives = 115/226 (50%), Gaps = 27/226 (11%)

Query: 370 NVIGVGGNGKVYKGVLEGGGAEIAVK--RISHENDGGTRAFLAEISSLGRLKHKSLVGLR 427
             IG G  G+VYK   +  G  +A+K  R+ +E +G     + EI  L +L H+++V L+
Sbjct: 13  GQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLNHRNIVNLK 72

Query: 428 GWC---------KREKGSLMLVYDYMEN---GSLDKWIFQCDGSMMLSCEERIR-VLKDV 474
                       K++KG+  LV++YM++   G L+         ++   E+ I+  +K +
Sbjct: 73  EIVTDKQDALDFKKDKGAFYLVFEYMDHDLMGLLES-------GLVHFSEDHIKSFMKQL 125

Query: 475 AAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRVVGTVG 534
             G+ Y H+   K  LHRDIK SN+LL+ +   +L DFGLAR++   +    T  V T+ 
Sbjct: 126 LEGLNYCHK---KNFLHRDIKCSNILLNNKGQIKLADFGLARLYNSEESRPYTNKVITLW 182

Query: 535 YLAPE-VFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEM 579
           Y  PE +    R     DV+  G ++ E+ + ++PI +    L ++
Sbjct: 183 YRPPELLLGEERYGPAIDVWSCGCILGELFT-KKPIFQANQELAQL 227

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely expressed in tissues. It interacts with cyclins L1 and L2, and plays roles in regulating transcription and alternative splicing. Length = 302

>gnl|CDD|173698 cd05607, STKc_GRK7, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

 Score = 85.8 bits (212), Expect = 2e-18
 Identities = 64/205 (31%), Positives = 95/205 (46%), Gaps = 10/205 (4%)

Query: 372 IGVGGNGKVYKGVLEGGGAEIAVKRISHE---NDGGTRAFLAEISSLGRLKHKSLVGLRG 428
           +G GG G+V    ++  G   A K++  +      G +  L E   L ++    +V L  
Sbjct: 1   LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNL-A 59

Query: 429 WCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKK 488
           +    K  L LV   M  G L   I+   G   L  E  I     +  G+L+LH      
Sbjct: 60  YAFESKTHLCLVMSLMNGGDLKYHIYNV-GERGLEMERVIHYSAQITCGILHLHS---MD 115

Query: 489 VLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRAST 548
           +++RD+K  NVLLD + N RL D GLA     G+  + T+  GT GY+APE+      S 
Sbjct: 116 IVYRDMKPENVLLDDQGNCRLSDLGLAVELKDGK--TITQRAGTNGYMAPEILKEEPYSY 173

Query: 549 QTDVFGFGILILEVLSGRRPIEEGK 573
             D F  G  I E+++GR P ++ K
Sbjct: 174 PVDWFAMGCSIYEMVAGRTPFKDHK 198

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual group of GRKs. It is primarily found in the retina and plays a role in the regulation of opsin light receptors. GRK7 is located in retinal cone outer segments and plays an important role in regulating photoresponse of the cones. Length = 277

>gnl|CDD|173658 cd05114, PTKc_Tec_Rlk, Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

 Score = 84.9 bits (210), Expect = 2e-18
 Identities = 61/193 (31%), Positives = 103/193 (53%), Gaps = 11/193 (5%)

Query: 391 EIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLD 450
           ++A+K I +E       F+ E   + +L H  LV L G C ++K  L +V ++MENG L 
Sbjct: 30  KVAIKAI-NEGAMSEEDFIEEAKVMMKLSHPKLVQLYGVCTQQK-PLYIVTEFMENGCLL 87

Query: 451 KWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLG 510
            ++ Q  G   LS +  + + +DV  G+ YL        +HRD+ + N L+      ++ 
Sbjct: 88  NYLRQRQGK--LSKDMLLSMCQDVCEGMEYLER---NSFIHRDLAARNCLVSSTGVVKVS 142

Query: 511 DFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLS-GRRPI 569
           DFG+ R     +  S++     V +  PEVF+  + S+++DV+ FG+L+ EV + G+ P 
Sbjct: 143 DFGMTRYVLDDEYTSSSGAKFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPF 202

Query: 570 EEGKPNL--VEMV 580
           E+ K N   VEM+
Sbjct: 203 EK-KSNYEVVEMI 214

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. Instead of PH, Rlk contains an N-terminal cysteine-rich region. In addition to PH, Tec also contains the Tec homology (TH) domain with proline-rich and zinc-binding regions. Tec kinases are expressed mainly by haematopoietic cells. Tec is more widely-expressed than other Tec subfamily kinases. It is found in endothelial cells, both B- and T-cells, and a variety of myeloid cells including mast cells, erythroid cells, platelets, macrophages and neutrophils. Rlk is expressed in T-cells and mast cell lines. Tec and Rlk are both key components of T-cell receptor (TCR) signaling. They are important in TCR-stimulated proliferation, IL-2 production and phopholipase C-gamma1 activation. Length = 256

>gnl|CDD|143338 cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

 Score = 85.4 bits (212), Expect = 3e-18
 Identities = 68/285 (23%), Positives = 120/285 (42%), Gaps = 35/285 (12%)

Query: 371 VIGVGGNGKVYKGVLEGGGAEIAVK--RISHENDGGTRAFLAEISSLGRLKHKSLVGLRG 428
           V+G G  G V K   +  G  +A+K  + S +++   +  L E+  L +L+H+++V L+ 
Sbjct: 8   VVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENIVNLKE 67

Query: 429 WCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKK 488
             +R KG L LV++Y+E   L+       G   L  +     +  +   + Y H      
Sbjct: 68  AFRR-KGRLYLVFEYVERTLLELLEASPGG---LPPDAVRSYIWQLLQAIAYCHS---HN 120

Query: 489 VLHRDIKSSNVLLDKEMNGRLGDFGLAR-MHGHGQVASTTRVVGTVGYLAPEVF-SSGRA 546
           ++HRDIK  N+L+ +    +L DFG AR +        T  V  T  Y APE+       
Sbjct: 121 IIHRDIKPENILVSESGVLKLCDFGFARALRARPASPLTDYVA-TRWYRAPELLVGDTNY 179

Query: 547 STQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELM--------VQGKLLDALDARLR 598
               DV+  G ++ E+L G  P+  G  + ++ ++ +            +L  + + R  
Sbjct: 180 GKPVDVWAIGCIMAELLDG-EPLFPGD-SDIDQLYLIQKCLGPLPPSHQELFSS-NPRFA 236

Query: 599 AKGGFDEDEVERVLH----------LGLL--CAYPDPRARPTMRQ 631
                +  + E +            L  L  C   DP+ R T  +
Sbjct: 237 GVAFPEPSQPESLERRYPGKVSSPALDFLKACLRMDPKERLTCDE 281

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning and memory. Length = 288

>gnl|CDD|143341 cd07836, STKc_Pho85, Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

 Score = 85.6 bits (212), Expect = 3e-18
 Identities = 69/210 (32%), Positives = 106/210 (50%), Gaps = 17/210 (8%)

Query: 372 IGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGT-RAFLAEISSLGRLKHKSLVGLRGWC 430
           +G G    VYKG     G  +A+K I  + + GT    + EIS +  LKH+++V L    
Sbjct: 8   LGEGTYATVYKGRNRTTGEIVALKEIHLDAEEGTPSTAIREISLMKELKHENIVRLHDVI 67

Query: 431 KREKGSLMLVYDYMENGSLDKWI----FQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWE 486
             E   LMLV++YM+   L K++     +             ++LK    G+ + HE   
Sbjct: 68  HTEN-KLMLVFEYMDK-DLKKYMDTHGVRGALDPNTVKSFTYQLLK----GIAFCHE--- 118

Query: 487 KKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRA 546
            +VLHRD+K  N+L++K    +L DFGLAR  G      +  VV T+ Y AP+V    R 
Sbjct: 119 NRVLHRDLKPQNLLINKRGELKLADFGLARAFGIPVNTFSNEVV-TLWYRAPDVLLGSRT 177

Query: 547 -STQTDVFGFGILILEVLSGRRPIEEGKPN 575
            ST  D++  G ++ E+++G RP+  G  N
Sbjct: 178 YSTSIDIWSVGCIMAEMITG-RPLFPGTNN 206

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment. It is not essential for yeast viability and is the functional homolog of mammalian CDK5, which plays a role in central nervous system development. Length = 284

>gnl|CDD|173738 cd07835, STKc_CDK1_like, Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

 Score = 85.4 bits (212), Expect = 3e-18
 Identities = 70/218 (32%), Positives = 108/218 (49%), Gaps = 23/218 (10%)

Query: 356 YQEIEAATKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRI--SHENDGGTRAFLAEIS 413
           YQ++E           IG G  G VYK   +  G  +A+K+I    E++G     + EIS
Sbjct: 1   YQKVEK----------IGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREIS 50

Query: 414 SLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIR-VLK 472
            L  L H ++V L      E   L LV++++ +  L K++     + +      I+  L 
Sbjct: 51  LLKELNHPNIVRLLDVVHSEN-KLYLVFEFL-DLDLKKYMDSSPLTGL--DPPLIKSYLY 106

Query: 473 DVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRVVGT 532
            +  G+ Y H     +VLHRD+K  N+L+D+E   +L DFGLAR  G      T  VV T
Sbjct: 107 QLLQGIAYCHS---HRVLHRDLKPQNLLIDREGALKLADFGLARAFGVPVRTYTHEVV-T 162

Query: 533 VGYLAPEVFSSGRA-STQTDVFGFGILILEVLSGRRPI 569
           + Y APE+    R  ST  D++  G +  E+++ RRP+
Sbjct: 163 LWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVN-RRPL 199

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 phase entry and progression while the CDK1/cyclin B complex is critical for G2 to M phase transition. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex plays a role in regulating DNA replication. Studies in knockout mice revealed that CDK1 can compensate for the loss of the cdk2 gene as it can also bind cyclin E and drive G1 to S phase transition. CDK3 is regulated by cyclin C and it phosphorylates pRB specifically during the G0/G1 transition. This phosphorylation is required for cells to exit G0 efficiently and enter the G1 phase. Length = 283

>gnl|CDD|132940 cd06609, STKc_MST3_like, Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

 Score = 85.0 bits (211), Expect = 3e-18
 Identities = 64/220 (29%), Positives = 101/220 (45%), Gaps = 42/220 (19%)

Query: 366 FSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLA-EISSLGRLK----- 419
           F+    IG G  G+VYK + +     +A+K I  E        +  EI  L + +     
Sbjct: 3   FTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQCRSPYIT 62

Query: 420 --HKSLVGLRGWCKREKGS-LMLVYDYMENGSLDKWIFQCDGSMMLSC---EERIR-VLK 472
             + S +         KGS L ++ +Y   GS           ++      E  I  +L+
Sbjct: 63  KYYGSFL---------KGSKLWIIMEYCGGGSC--------LDLLKPGKLDETYIAFILR 105

Query: 473 DVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTR---- 528
           +V  G+ YLHE  E K+ HRDIK++N+LL +E + +L DFG++     GQ+ ST      
Sbjct: 106 EVLLGLEYLHE--EGKI-HRDIKAANILLSEEGDVKLADFGVS-----GQLTSTMSKRNT 157

Query: 529 VVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRP 568
            VGT  ++APEV        + D++  GI  +E+  G  P
Sbjct: 158 FVGTPFWMAPEVIKQSGYDEKADIWSLGITAIELAKGEPP 197

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN) signaling pathway, and plays a role in cytokinesis. SPS1 plays a role in regulating proteins required for spore wall formation. MST4 plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. STK25 may play a role in the regulation of cell migration and polarization. Length = 274

>gnl|CDD|173742 cd07845, STKc_CDK10, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

 Score = 85.5 bits (212), Expect = 4e-18
 Identities = 70/231 (30%), Positives = 118/231 (51%), Gaps = 26/231 (11%)

Query: 366 FSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHEN--DGGTRAFLAEISSLGRLKHKSL 423
           F + N IG G  G VY+      G  +A+K++  +N  DG   + L EI+ L  L+H ++
Sbjct: 9   FEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLRHPNI 68

Query: 424 VGLR----GWCKREKGSLMLVYDYMEN--GSLDKWIFQCDGSMMLSCEERIRVL-KDVAA 476
           V L+    G   +   S+ LV +Y E    SL       D       E +++ L   +  
Sbjct: 69  VELKEVVVG---KHLDSIFLVMEYCEQDLASL------LDNMPTPFSESQVKCLMLQLLR 119

Query: 477 GVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYL 536
           G+ YLHE +   ++HRD+K SN+LL  +   ++ DFGLAR +G      T +VV T+ Y 
Sbjct: 120 GLQYLHENF---IIHRDLKVSNLLLTDKGCLKIADFGLARTYGLPAKPMTPKVV-TLWYR 175

Query: 537 APEV-FSSGRASTQTDVFGFGILILEVLSGRRPIEEGKP--NLVEMVWELM 584
           APE+       +T  D++  G ++ E+L+  +P+  GK     ++++ +L+
Sbjct: 176 APELLLGCTTYTTAIDMWAVGCILAELLAH-KPLLPGKSEIEQLDLIIQLL 225

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing increases the transcription of c-RAF and the activation of the p42/p44 MAPK pathway, which leads to antiestrogen resistance. Patients who express low levels of CDK10 relapse early on tamoxifen. Length = 309

>gnl|CDD|133195 cd05064, PTKc_EphR_A10, Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10

 Score = 84.6 bits (209), Expect = 4e-18
 Identities = 58/206 (28%), Positives = 109/206 (52%), Gaps = 13/206 (6%)

Query: 369 ENVIGVGGNGKVYKGVLEGGGAE---IAVKRI-SHENDGGTRAFLAEISSLGRLKHKSLV 424
           E ++G G  G++ +G L+        +A+  + +  +D   R FLAE  +LG+  H ++V
Sbjct: 10  ERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQRRGFLAEALTLGQFDHSNIV 69

Query: 425 GLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHE- 483
            L G   R   ++M+V +YM NG+LD ++ + +G   L   + + +L  +A+G+ YL E 
Sbjct: 70  RLEGVITR-GNTMMIVTEYMSNGALDSFLRKHEGQ--LVAGQLMGMLPGLASGMKYLSEM 126

Query: 484 GWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSS 543
           G+    +H+ + +  VL++ ++  ++  F   +      + +T      V + APE    
Sbjct: 127 GY----VHKGLAAHKVLVNSDLVCKISGFRRLQEDKSEAIYTTMSGKSPVLWAAPEAIQY 182

Query: 544 GRASTQTDVFGFGILILEVLS-GRRP 568
              S+ +DV+ FGI++ EV+S G RP
Sbjct: 183 HHFSSASDVWSFGIVMWEVMSYGERP 208

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). EphA10, which contains an inactive tyr kinase domain, may function to attenuate signals of co-clustered active receptors. EphA10 is mainly expressed in the testis. Ephrin/EphR interaction results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. Length = 266

>gnl|CDD|132960 cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

 Score = 84.5 bits (209), Expect = 6e-18
 Identities = 59/217 (27%), Positives = 107/217 (49%), Gaps = 32/217 (14%)

Query: 371 VIGVGGNGKVYKGVLEGGGAEIAVKRI-----SHENDGGTR-----AFLAEISSLGRLKH 420
           +IG G  G+VY  +    G  +AVK++             +     A  +EI +L  L H
Sbjct: 8   LIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDH 67

Query: 421 KSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSC----EERIR-VLKDVA 475
            ++V   G  +  +  L +  +Y+  GS+        GS + +     E+ +R   + V 
Sbjct: 68  LNIVQYLG-FETTEEYLSIFLEYVPGGSI--------GSCLRTYGRFEEQLVRFFTEQVL 118

Query: 476 AGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHG--HGQVASTTRVVGTV 533
            G+ YLH    K +LHRD+K+ N+L+D +   ++ DFG+++     +    + + + G+V
Sbjct: 119 EGLAYLHS---KGILHRDLKADNLLVDADGICKISDFGISKKSDDIYDNDQNMS-MQGSV 174

Query: 534 GYLAPEVFSSGRA--STQTDVFGFGILILEVLSGRRP 568
            ++APEV  S     S + D++  G ++LE+ +GRRP
Sbjct: 175 FWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRP 211

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell integrity MAPK pathway, which is activated by stresses and aggressions to the cell wall. The MAPKKK Bck1, MAPKKs Mkk1 and Mkk2, and the MAPK Slt2 make up the cascade that is important in the maintenance of cell wall homeostasis. Fission yeast Mkh1 is involved in MAPK cascades regulating cell morphology, cell wall integrity, salt resistance, and filamentous growth in response to stress. Length = 272

>gnl|CDD|132956 cd06625, STKc_MEKK3_like, Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

 Score = 84.1 bits (208), Expect = 6e-18
 Identities = 62/212 (29%), Positives = 101/212 (47%), Gaps = 18/212 (8%)

Query: 372 IGVGGNGKVYKGVLEGGGAEIAVKRISHENDGG-----TRAFLAEISSLGRLKHKSLVGL 426
           +G G  G+VY       G E+AVK++  + D         A   EI  L  L+H+ +V  
Sbjct: 10  LGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQY 69

Query: 427 RGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWE 486
            G C R+  +L +  +YM  GS+   +    G++  +   +    + +  GV YLH    
Sbjct: 70  YG-CLRDDETLSIFMEYMPGGSVKDQLKAY-GALTETVTRKYT--RQILEGVEYLHS--- 122

Query: 487 KKVLHRDIKSSNVLLDKEMNGRLGDFG----LARMHGHGQVASTTRVVGTVGYLAPEVFS 542
             ++HRDIK +N+L D   N +LGDFG    L  +   G    +  V GT  +++PEV S
Sbjct: 123 NMIVHRDIKGANILRDSAGNVKLGDFGASKRLQTICSSGTGMKS--VTGTPYWMSPEVIS 180

Query: 543 SGRASTQTDVFGFGILILEVLSGRRPIEEGKP 574
                 + DV+  G  ++E+L+ + P  E + 
Sbjct: 181 GEGYGRKADVWSVGCTVVEMLTEKPPWAEFEA 212

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK2 and MEKK3 activate MEK5 (also called MKK5), which activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. MEKK2 and MEKK3 can also activate the MAPKs, c-Jun N-terminal kinase (JNK) and p38, through their respective MAPKKs. Length = 263

>gnl|CDD|143344 cd07839, STKc_CDK5, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

 Score = 84.4 bits (209), Expect = 6e-18
 Identities = 66/207 (31%), Positives = 102/207 (49%), Gaps = 15/207 (7%)

Query: 372 IGVGGNGKVYKGVLEGGGAEIAVKRISHEND--GGTRAFLAEISSLGRLKHKSLVGLRGW 429
           IG G  G V+K         +A+KR+  ++D  G   + L EI  L  LKHK++V L   
Sbjct: 8   IGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLYDV 67

Query: 430 CKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERI--RVLKDVAAGVLYLHEGWEK 487
              +K  L LV++Y +   L K+   C+G +     +    ++LK    G+ + H     
Sbjct: 68  LHSDK-KLTLVFEYCDQ-DLKKYFDSCNGDIDPEIVKSFMFQLLK----GLAFCHS---H 118

Query: 488 KVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEV-FSSGRA 546
            VLHRD+K  N+L++K    +L DFGLAR  G   V   +  V T+ Y  P+V F +   
Sbjct: 119 NVLHRDLKPQNLLINKNGELKLADFGLARAFGI-PVRCYSAEVVTLWYRPPDVLFGAKLY 177

Query: 547 STQTDVFGFGILILEVLSGRRPIEEGK 573
           ST  D++  G +  E+ +  RP+  G 
Sbjct: 178 STSIDMWSAGCIFAELANAGRPLFPGN 204

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also important in synaptic plasticity and learning. CDK5 also participates in protecting against cell death and promoting angiogenesis. Impaired CDK5 activity is implicated in Alzheimer's disease, amyotrophic lateral sclerosis, Parkinson's disease, Huntington's disease and acute neuronal injury. Length = 284

>gnl|CDD|133202 cd05071, PTKc_Src, Catalytic domain of the Protein Tyrosine Kinase, Src

 Score = 83.6 bits (206), Expect = 7e-18
 Identities = 70/268 (26%), Positives = 124/268 (46%), Gaps = 25/268 (9%)

Query: 372 IGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCK 431
           +G G  G+V+ G   G    +A+K +         AFL E   + +L+H+ LV L     
Sbjct: 14  LGQGCFGEVWMGTWNGT-TRVAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 71

Query: 432 REKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLH 491
            E   + +V +YM  GSL  ++ + +    L   + + +   +A+G+ Y+        +H
Sbjct: 72  EE--PIYIVTEYMSKGSLLDFL-KGEMGKYLRLPQLVDMAAQIASGMAYVER---MNYVH 125

Query: 492 RDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTD 551
           RD++++N+L+ + +  ++ DFGLAR+    +  +       + + APE    GR + ++D
Sbjct: 126 RDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSD 185

Query: 552 VFGFGILILEVLS-GRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRAKGGFDEDEVER 610
           V+ FGIL+ E+ + GR P            +  MV  ++LD ++   R        E   
Sbjct: 186 VWSFGILLTELTTKGRVP------------YPGMVNREVLDQVERGYRMPC---PPECPE 230

Query: 611 VLH-LGLLCAYPDPRARPTMRQVVKVLE 637
            LH L   C   +P  RPT   +   LE
Sbjct: 231 SLHDLMCQCWRKEPEERPTFEYLQAFLE 258

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Src also play a role in regulating cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Elevated levels of Src kinase activity have been reported in a variety of human cancers. Several inhibitors of Src have been developed as anti-cancer drugs. Src is also implicated in acute inflammatory responses and osteoclast function. Length = 262

>gnl|CDD|133189 cd05058, PTKc_Met_Ron, Catalytic domain of the Protein Tyrosine Kinases, Met and Ron

 Score = 83.3 bits (206), Expect = 9e-18
 Identities = 81/299 (27%), Positives = 125/299 (41%), Gaps = 73/299 (24%)

Query: 370 NVIGVGGNGKVYKGVL---EGGGAEIAVKRISHEND-GGTRAFLAEISSLGRLKHKSLVG 425
            VIG G  G VY G L   +G     AVK ++   D      FL E   +    H +++ 
Sbjct: 1   RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDFSHPNVLS 60

Query: 426 LRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKD-------VAAGV 478
           L G C   +GS ++V  YM++G L  +I           E     +KD       VA G+
Sbjct: 61  LLGICLPSEGSPLVVLPYMKHGDLRNFIRS---------ETHNPTVKDLIGFGLQVAKGM 111

Query: 479 LYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLAR---------MHGHGQVASTTRV 529
            YL     KK +HRD+ + N +LD+    ++ DFGLAR         +H H         
Sbjct: 112 EYLAS---KKFVHRDLAARNCMLDESFTVKVADFGLARDIYDKEYYSVHNHTGAKLP--- 165

Query: 530 VGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKL 589
              V ++A E   + + +T++DV+ FG+L+                     WELM +G  
Sbjct: 166 ---VKWMALESLQTQKFTTKSDVWSFGVLL---------------------WELMTRGAP 201

Query: 590 ----LDA-------LDARLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLE 637
               +D+       L  R   +  +  D +  V+   L C +P P  RPT  ++V  +E
Sbjct: 202 PYPDVDSFDITVYLLQGRRLLQPEYCPDPLYEVM---LSCWHPKPEMRPTFSELVSRIE 257

Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also called the HGF receptor. HGF/Met signaling plays a role in growth, transformation, cell motility, invasion, metastasis, angiogenesis, wound healing, and tissue regeneration. Aberrant expression of Met through mutations or gene amplification is associated with many human cancers including hereditary papillary renal and gastric carcinomas. The ligand for Ron is macrophage stimulating protein (MSP). Ron signaling is important in regulating cell motility, adhesion, proliferation, and apoptosis. Aberrant Ron expression is implicated in tumorigenesis and metastasis. Length = 262

>gnl|CDD|173725 cd06608, STKc_myosinIII_like, Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

 Score = 83.9 bits (208), Expect = 9e-18
 Identities = 66/224 (29%), Positives = 99/224 (44%), Gaps = 30/224 (13%)

Query: 371 VIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRL-KHKSLVGLRG- 428
           VIG G  GKVYK   +  G  +A+K +    D        E + L +   H ++    G 
Sbjct: 13  VIGEGTYGKVYKARHKKTGQLVAIKIMDIIEDEEEEI-KEEYNILRKYSNHPNIATFYGA 71

Query: 429 WCKR----EKGSLMLVYDYMENGS---LDKWIFQCDGSMMLSCEERIR-VLKDVAAGVLY 480
           + K+        L LV +    GS   L K + +    +    EE I  +L++   G+ Y
Sbjct: 72  FIKKNPPGNDDQLWLVMELCGGGSVTDLVKGLRKKGKRLK---EEWIAYILRETLRGLAY 128

Query: 481 LHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEV 540
           LHE    KV+HRDIK  N+LL K    +L DFG++           T  +GT  ++APEV
Sbjct: 129 LHE---NKVIHRDIKGQNILLTKNAEVKLVDFGVSAQLDSTLGRRNT-FIGTPYWMAPEV 184

Query: 541 FSSGRASTQT-----DVFGFGILILEVLSGRRPIEEGKPNLVEM 579
            +       +     DV+  GI  +E       + +GKP L +M
Sbjct: 185 IACDEQPDASYDARSDVWSLGITAIE-------LADGKPPLCDM 221

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin III may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. It may also function as a cargo carrier during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. The Drosophila class III myosin, called NinaC (Neither inactivation nor afterpotential protein C), is critical in normal adaptation and termination of photoresponse. Vertebrates contain two isoforms of class III myosin, IIIA and IIIB. This subfamily also includes mammalian NIK-like embryo-specific kinase (NESK), Traf2- and Nck-interacting kinase (TNIK), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6). MAP4Ks are involved in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Length = 275

>gnl|CDD|173633 cd05052, PTKc_Abl, Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

 Score = 83.4 bits (206), Expect = 9e-18
 Identities = 66/271 (24%), Positives = 132/271 (48%), Gaps = 23/271 (8%)

Query: 369 ENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRG 428
           ++ +G G  G+VY+GV +     +AVK +  E+      FL E + +  +KH +LV L G
Sbjct: 11  KHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLG 69

Query: 429 WCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKK 488
            C RE     ++ ++M  G+L  ++ +C+    ++    + +   +++ + YL +   K 
Sbjct: 70  VCTREP-PFYIITEFMTYGNLLDYLRECNRQE-VNAVVLLYMATQISSAMEYLEK---KN 124

Query: 489 VLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRAST 548
            +HRD+ + N L+ +    ++ DFGL+R+       +       + + APE  +  + S 
Sbjct: 125 FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSI 184

Query: 549 QTDVFGFGILILEVLS-GRRPIEEGKPNL-VEMVWELMVQGKLLDALDARLRAKGGFDED 606
           ++DV+ FG+L+ E+ + G  P     P + +  V+EL+ +G  ++      R +G     
Sbjct: 185 KSDVWAFGVLLWEIATYGMSPY----PGIDLSQVYELLEKGYRME------RPEGC---- 230

Query: 607 EVERVLHLGLLCAYPDPRARPTMRQVVKVLE 637
              +V  L   C   +P  RP+  ++ +  E
Sbjct: 231 -PPKVYELMRACWQWNPSDRPSFAEIHQAFE 260

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays a role in cell proliferation and survival. In response to DNA damage or oxidative stress, Abl is transported to the nucleus where it induces apoptosis. In chronic myelogenous leukemia (CML) patients, an aberrant translocation results in the replacement of the first exon of Abl with the BCR (breakpoint cluster region) gene. The resulting BCR-Abl fusion protein is constitutively active and associates into tetramers, resulting in a hyperactive kinase sending a continuous signal. This leads to uncontrolled proliferation, morphological transformation and anti-apoptotic effects. BCR-Abl is the target of selective inhibitors, such as imatinib (Gleevec), used in the treatment of CML. Abl2, also known as ARG (Abelson-related gene), is thought to play a cooperative role with Abl in the proper development of the nervous system. The Tel-ARG fusion protein, resulting from reciprocal translocation between chromosomes 1 and 12, is associated with acute myeloid leukemia (AML). The TEL gene is a frequent fusion partner of other tyr kinase oncogenes, including Tel/Abl, Tel/PDGFRbeta, and Tel/Jak2, found in patients with leukemia and myeloproliferative disorders. Length = 263

>gnl|CDD|173761 cd08221, STKc_Nek9, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

 Score = 83.3 bits (206), Expect = 9e-18
 Identities = 61/244 (25%), Positives = 117/244 (47%), Gaps = 23/244 (9%)

Query: 391 EIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLD 450
           E+ + R+S +     R  L EI  L  L+H +++        +  +L++  +Y   G+L 
Sbjct: 32  EVNLTRLSEK---ERRDALNEIVILSLLQHPNIIAYYNHFM-DDNTLLIEMEYANGGTLY 87

Query: 451 KWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLG 510
             I +  G +    E  +  L  + + V Y+H+     +LHRDIK+ N+ L K    +LG
Sbjct: 88  DKIVRQKGQL-FEEEMVLWYLFQIVSAVSYIHK---AGILHRDIKTLNIFLTKAGLIKLG 143

Query: 511 DFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIE 570
           DFG++++ G     + T VVGT  Y++PE+    + + ++D++  G ++ E+L+ +R  +
Sbjct: 144 DFGISKILGSEYSMAET-VVGTPYYMSPELCQGVKYNFKSDIWALGCVLYELLTLKRTFD 202

Query: 571 EGKPNLVEMVWELMVQGKLLDALDARLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMR 630
               N + +V +++ QG               +   E+  ++H        DP  RPT  
Sbjct: 203 --ATNPLNLVVKIV-QG-------NYTPVVSVYSS-ELISLVH---SLLQQDPEKRPTAD 248

Query: 631 QVVK 634
           +V+ 
Sbjct: 249 EVLD 252

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associates with FACT (FAcilitates Chromatin Transcription) and modulates interphase progression. It also interacts with Nek6, and Nek7, during mitosis, resulting in their activation. Length = 256

>gnl|CDD|173754 cd07865, STKc_CDK9, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

 Score = 84.4 bits (209), Expect = 1e-17
 Identities = 68/217 (31%), Positives = 112/217 (51%), Gaps = 26/217 (11%)

Query: 372 IGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAF----LAEISSLGRLKHKSLVGLR 427
           IG G  G+V+K   +     +A+K++  EN+     F    L EI  L  LKH+++V L 
Sbjct: 20  IGQGTFGEVFKARHKKTKQIVALKKVLMENE--KEGFPITALREIKILQLLKHENVVNLI 77

Query: 428 GWCK-------REKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLY 480
             C+       R KGS  LV+++ E+   D      + ++  +  E  +V+K +  G+ Y
Sbjct: 78  EICRTKATPYNRYKGSFYLVFEFCEH---DLAGLLSNKNVKFTLSEIKKVMKMLLNGLYY 134

Query: 481 LHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVAS----TTRVVGTVGYL 536
           +H     K+LHRD+K++N+L+ K+   +L DFGLAR     + +     T RVV T+ Y 
Sbjct: 135 IHR---NKILHRDMKAANILITKDGILKLADFGLARAFSLSKNSKPNRYTNRVV-TLWYR 190

Query: 537 APEVFSSGRA-STQTDVFGFGILILEVLSGRRPIEEG 572
            PE+    R      D++G G ++ E+ + R PI +G
Sbjct: 191 PPELLLGERDYGPPIDMWGAGCIMAEMWT-RSPIMQG 226

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multiple steps of gene expression including transcription elongation, mRNA synthesis, processing, export, and translation. It also plays a role in mediating cytokine induced transcription networks such as IL6-induced STAT3 signaling. In addition, the CDK9/cyclin T2a complex promotes muscle differentiation and enhances the function of some myogenic regulatory factors. Length = 310

>gnl|CDD|173765 cd08225, STKc_Nek5, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

 Score = 83.1 bits (205), Expect = 1e-17
 Identities = 61/204 (29%), Positives = 106/204 (51%), Gaps = 11/204 (5%)

Query: 371 VIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGG--TRAFLAEISSLGRLKHKSLVGLRG 428
            IG G  GK+Y    +       +K I           A   E+  L ++KH ++V    
Sbjct: 7   KIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPNIVTFFA 66

Query: 429 WCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKK 488
              +E G L +V +Y + G L K I +  G ++ S ++ +     ++ G+ ++H+   +K
Sbjct: 67  -SFQENGRLFIVMEYCDGGDLMKRINRQRG-VLFSEDQILSWFVQISLGLKHIHD---RK 121

Query: 489 VLHRDIKSSNVLLDKE-MNGRLGDFGLAR-MHGHGQVASTTRVVGTVGYLAPEVFSSGRA 546
           +LHRDIKS N+ L K  M  +LGDFG+AR ++   ++A T   VGT  YL+PE+  +   
Sbjct: 122 ILHRDIKSQNIFLSKNGMVAKLGDFGIARQLNDSMELAYT--CVGTPYYLSPEICQNRPY 179

Query: 547 STQTDVFGFGILILEVLSGRRPIE 570
           + +TD++  G ++ E+ + + P E
Sbjct: 180 NNKTDIWSLGCVLYELCTLKHPFE 203

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown. Length = 257

>gnl|CDD|132978 cd06647, STKc_PAK_I, Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

 Score = 83.8 bits (207), Expect = 1e-17
 Identities = 58/209 (27%), Positives = 104/209 (49%), Gaps = 17/209 (8%)

Query: 364 KGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSL 423
           K ++    IG G +G VY  +    G E+A+K+++ +        + EI  +   KH ++
Sbjct: 19  KKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQPKKELIINEILVMRENKHPNI 78

Query: 424 VG-LRGWCKREKGSLMLVYDYMENGSLDKWIFQC---DGSMMLSCEERIRVLKDVAAGVL 479
           V  L  +   ++  L +V +Y+  GSL   + +    +G +   C E ++ L+       
Sbjct: 79  VNYLDSYLVGDE--LWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALE------- 129

Query: 480 YLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPE 539
           +LH     +V+HRDIKS N+LL  + + +L DFG        Q   +T +VGT  ++APE
Sbjct: 130 FLHS---NQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRST-MVGTPYWMAPE 185

Query: 540 VFSSGRASTQTDVFGFGILILEVLSGRRP 568
           V +      + D++  GI+ +E++ G  P
Sbjct: 186 VVTRKAYGPKVDIWSLGIMAIEMVEGEPP 214

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs, also called conventional PAKs, include PAK1, PAK2, and PAK3. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). They interact with the SH3 domain containing proteins Nck, Grb2 and PIX. Binding of group I PAKs to activated GTPases leads to conformational changes that destabilize the AID, allowing autophosphorylation and full activation of the kinase domain. Known group I PAK substrates include MLCK, Bad, Raf, MEK1, LIMK, Merlin, Vimentin, Myc, Stat5a, and Aurora A, among others. Length = 293

>gnl|CDD|173636 cd05057, PTKc_EGFR_like, Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

 Score = 82.8 bits (205), Expect = 2e-17
 Identities = 56/217 (25%), Positives = 101/217 (46%), Gaps = 27/217 (12%)

Query: 371 VIGVGGNGKVYKGV----LEGGGAEIAVKRISHEND-GGTRAFLAEISSLGRLKHKSLVG 425
           V+G G  G VYKGV     E     +A+K +  E      +  L E   +  + H  +V 
Sbjct: 14  VLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVDHPHVVR 73

Query: 426 LRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSM----MLSCEERIRVLKDVAAGVLYL 481
           L G C      + L+   M  G L  ++     ++    +L+   +I      A G+ YL
Sbjct: 74  LLGICLSS--QVQLITQLMPLGCLLDYVRNHKDNIGSQYLLNWCVQI------AKGMSYL 125

Query: 482 HEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQ---VASTTRVVGTVGYLAP 538
            E   K+++HRD+ + NVL+    + ++ DFGLA++    +    A   +V   + ++A 
Sbjct: 126 EE---KRLVHRDLAARNVLVKTPQHVKITDFGLAKLLDVDEKEYHAEGGKV--PIKWMAL 180

Query: 539 EVFSSGRASTQTDVFGFGILILEVLS-GRRPIEEGKP 574
           E       + ++DV+ +G+ + E+++ G +P  EG P
Sbjct: 181 ESILHRIYTHKSDVWSYGVTVWELMTFGAKPY-EGIP 216

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, resulting in the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Collectively, they can recognize a variety of ligands including EGF, TGFalpha, and neuregulins, among others. All four subfamily members can form homo- or heterodimers. HER3 contains an impaired kinase domain and depends on its heterodimerization partner for activation. EGFR subfamily members are involved in signaling pathways leading to a broad range of cellular responses including cell proliferation, differentiation, migration, growth inhibition, and apoptosis. Gain of function alterations, through their overexpression, deletions, or point mutations in their kinase domains, have been implicated in various cancers. These receptors are targets of many small molecule inhibitors and monoclonal antibodies used in cancer therapy. Length = 279

>gnl|CDD|173760 cd08220, STKc_Nek8, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

 Score = 82.2 bits (203), Expect = 2e-17
 Identities = 73/270 (27%), Positives = 128/270 (47%), Gaps = 32/270 (11%)

Query: 371 VIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTR----AFLAEISSLGRLKHKSLVGL 426
           V+G G  G V+    +     + +K+I  E    T+    A   E   L  L H +++  
Sbjct: 7   VVGRGAFGIVHLCRRKADQKLVIIKQIPVE--QMTKDERLAAQNECQVLKLLSHPNIIEY 64

Query: 427 RGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWE 486
                 +K +LM+V +Y   G+L ++I Q   + +L  +    +L      +L LH    
Sbjct: 65  YENFLEDK-ALMIVMEYAPGGTLAEYI-QKRCNSLLDEDT---ILHFFVQILLALHHVHT 119

Query: 487 KKVLHRDIKSSNVLLDK-EMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGR 545
           K +LHRD+K+ N+LLDK +M  ++GDFG++++      A T  VVGT  Y++PE+     
Sbjct: 120 KLILHRDLKTQNILLDKHKMVVKIGDFGISKILSSKSKAYT--VVGTPCYISPELCEGKP 177

Query: 546 ASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELM--VQGKLLDALDARLRAKGGF 603
            + ++D++  G ++ E+ S +R  E    NL  +V ++M      + D     LR     
Sbjct: 178 YNQKSDIWALGCVLYELASLKRAFEAA--NLPALVLKIMSGTFAPISDRYSPDLRQL--- 232

Query: 604 DEDEVERVLHLGLLCAYPDPRARPTMRQVV 633
               +  +L+L       DP  RP + Q++
Sbjct: 233 ----ILSMLNL-------DPSKRPQLSQIM 251

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with a rare form of juvenile renal cystic disease, nephronophthisis type 9. It has been suggested that a defect in the ciliary localization of Nek8 contributes to the development of cysts manifested by these diseases. Length = 256

>gnl|CDD|133201 cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

 Score = 82.4 bits (203), Expect = 2e-17
 Identities = 72/266 (27%), Positives = 119/266 (44%), Gaps = 21/266 (7%)

Query: 372 IGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCK 431
           +G G  G+V+ G   G   ++AVK +         +FL E   + +L+H  LV L     
Sbjct: 14  LGNGQFGEVWMGTWNGN-TKVAVKTLK-PGTMSPESFLEEAQIMKKLRHDKLVQLYAVVS 71

Query: 432 REKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLH 491
            E   + +V +YM  GSL  ++   +G   L     + +   VAAG+ Y+        +H
Sbjct: 72  EE--PIYIVTEYMSKGSLLDFLKDGEGRA-LKLPNLVDMAAQVAAGMAYIER---MNYIH 125

Query: 492 RDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTD 551
           RD++S+N+L+   +  ++ DFGLAR+    +  +       + + APE    GR + ++D
Sbjct: 126 RDLRSANILVGDGLVCKIADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSD 185

Query: 552 VFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRAKGGFDEDEVERV 611
           V+ FGIL+ E+++  R    G  N    V E + +G        R+           E +
Sbjct: 186 VWSFGILLTELVTKGRVPYPGMNN--REVLEQVERG-------YRMPCPQDCPISLHELM 236

Query: 612 LHLGLLCAYPDPRARPTMRQVVKVLE 637
           L     C   DP  RPT   +   LE
Sbjct: 237 LQ----CWKKDPEERPTFEYLQSFLE 258

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Fyn, together with Lck, plays a critical role in T-cell signal transduction by phosphorylating ITAM (immunoreceptor tyr activation motif) sequences on T-cell receptors, ultimately leading to the proliferation and differentiation of T-cells. In addition, Fyn is involved in the myelination of neurons, and is implicated in Alzheimer's and Parkinson's diseases. Yrk has been detected only in chickens. It is primarily found in neuronal and epithelial cells and in macrophages. It may play a role in inflammation and in response to injury. Length = 260

>gnl|CDD|143377 cd07872, STKc_PCTAIRE2, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

 Score = 83.1 bits (205), Expect = 3e-17
 Identities = 67/198 (33%), Positives = 105/198 (53%), Gaps = 12/198 (6%)

Query: 372 IGVGGNGKVYKGVLEGGGAEIAVK--RISHENDGGTRAFLAEISSLGRLKHKSLVGLRGW 429
           +G G    V+KG  +     +A+K  R+ HE +G     + E+S L  LKH ++V L   
Sbjct: 14  LGEGTYATVFKGRSKLTENLVALKEIRLEHE-EGAPCTAIREVSLLKDLKHANIVTLHDI 72

Query: 430 CKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKV 489
              +K SL LV++Y++   L +++  C G++M     +I  L  +  G+ Y H    +KV
Sbjct: 73  VHTDK-SLTLVFEYLDK-DLKQYMDDC-GNIMSMHNVKI-FLYQILRGLAYCHR---RKV 125

Query: 490 LHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEV-FSSGRAST 548
           LHRD+K  N+L+++    +L DFGLAR         +  VV T+ Y  P+V   S   ST
Sbjct: 126 LHRDLKPQNLLINERGELKLADFGLARAKSVPTKTYSNEVV-TLWYRPPDVLLGSSEYST 184

Query: 549 QTDVFGFGILILEVLSGR 566
           Q D++G G +  E+ SGR
Sbjct: 185 QIDMWGVGCIFFEMASGR 202

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play a role in regulating mitochondrial function in neurons. Length = 309

>gnl|CDD|173657 cd05113, PTKc_Btk_Bmx, Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

 Score = 81.8 bits (202), Expect = 3e-17
 Identities = 60/200 (30%), Positives = 101/200 (50%), Gaps = 9/200 (4%)

Query: 372 IGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCK 431
           +G G  G V  G   G   ++A+K I  E       F+ E   + +L H+ LV L G C 
Sbjct: 12  LGTGQFGVVKYGKWRGQ-YDVAIKMIK-EGSMSEDEFIEEAKVMMKLSHEKLVQLYGVCT 69

Query: 432 REKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLH 491
           +++  + +V +YM NG L  ++ +          + + + KDV  G+ YL     K+ +H
Sbjct: 70  KQR-PIYIVTEYMSNGCLLNYLRE--HGKRFQPSQLLEMCKDVCEGMAYLES---KQFIH 123

Query: 492 RDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTD 551
           RD+ + N L+D +   ++ DFGL+R     +  S+      V +  PEV    + S+++D
Sbjct: 124 RDLAARNCLVDDQGCVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLLYSKFSSKSD 183

Query: 552 VFGFGILILEVLS-GRRPIE 570
           V+ FG+L+ EV S G+ P E
Sbjct: 184 VWAFGVLMWEVYSLGKMPYE 203

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Btk contains the Tec homology (TH) domain with proline-rich and zinc-binding regions. Tec kinases are expressed mainly by haematopoietic cells. Btk is expressed in B-cells, and a variety of myeloid cells including mast cells, platelets, neutrophils, and dendrictic cells. It interacts with a variety of partners, from cytosolic proteins to nuclear transcription factors, suggesting a diversity of functions. Stimulation of a diverse array of cell surface receptors, including antigen engagement of the B-cell receptor (BCR), leads to PH-mediated membrane translocation of Btk and subsequent phosphorylation by Src kinase and activation. Btk plays an important role in the life cycle of B-cells including their development, differentiation, proliferation, survival, and apoptosis. Mutations in Btk cause the primary immunodeficiency disease, X-linked agammaglobulinaemia (XLA) in humans. Bmx is primarily expressed in bone marrow and the arterial endothelium, and plays an important role in ischemia-induced angiogenesis. It facilitates arterial growth, capillary formation, vessel maturation, and bone marrow-derived endothelial progenitor cell mobilization. Length = 256

>gnl|CDD|173763 cd08223, STKc_Nek4, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

 Score = 81.6 bits (201), Expect = 3e-17
 Identities = 62/222 (27%), Positives = 112/222 (50%), Gaps = 12/222 (5%)

Query: 371 VIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGT--RAFLAEISSLGRLKHKSLVGLRG 428
           V+G G  G+V        G +  +K+++  N      +A   E   L +LKH ++V  R 
Sbjct: 7   VVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIVAYRE 66

Query: 429 WCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKK 488
             + E G L +V  + E G L   + +  G ++    + +     +A  + YLHE   K 
Sbjct: 67  SWEGEDGLLYIVMGFCEGGDLYHKLKEQKGKLLPE-NQVVEWFVQIAMALQYLHE---KH 122

Query: 489 VLHRDIKSSNVLLDKEMNGRLGDFGLAR-MHGHGQVASTTRVVGTVGYLAPEVFSSGRAS 547
           +LHRD+K+ NV L +    ++GD G+AR +     +AST  ++GT  Y++PE+FS+   +
Sbjct: 123 ILHRDLKTQNVFLTRTNIIKVGDLGIARVLENQCDMAST--LIGTPYYMSPELFSNKPYN 180

Query: 548 TQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKL 589
            ++DV+  G  + E+ + +        N   +V+ + ++GKL
Sbjct: 181 YKSDVWALGCCVYEMATLKHAFNAKDMN--SLVYRI-IEGKL 219

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown. Length = 257

>gnl|CDD|132942 cd06611, STKc_SLK_like, Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

 Score = 81.7 bits (202), Expect = 4e-17
 Identities = 61/210 (29%), Positives = 102/210 (48%), Gaps = 16/210 (7%)

Query: 372 IGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCK 431
           +G G  GKVYK   +  G   A K I  E++     F+ EI  L   KH ++VGL     
Sbjct: 13  LGDGAFGKVYKAQHKETGLFAAAKIIQIESEEELEDFMVEIDILSECKHPNIVGLYE-AY 71

Query: 432 REKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIR-VLKDVAAGVLYLHEGWEKKVL 490
             +  L ++ ++ + G+LD  + + +  +    E +IR V + +   + +LH     KV+
Sbjct: 72  FYENKLWILIEFCDGGALDSIMLELERGLT---EPQIRYVCRQMLEALNFLHS---HKVI 125

Query: 491 HRDIKSSNVLLDKEMNGRLGDFGL-ARMHGHGQVASTTRVVGTVGYLAPEV-----FSSG 544
           HRD+K+ N+LL  + + +L DFG+ A+     Q   T   +GT  ++APEV     F   
Sbjct: 126 HRDLKAGNILLTLDGDVKLADFGVSAKNKSTLQKRDT--FIGTPYWMAPEVVACETFKDN 183

Query: 545 RASTQTDVFGFGILILEVLSGRRPIEEGKP 574
               + D++  GI ++E+     P  E  P
Sbjct: 184 PYDYKADIWSLGITLIELAQMEPPHHELNP 213

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. SmSLK is capable of activating the MAPK Jun N-terminal kinase (JNK) pathway in human embryonic kidney (HEK) cells as well as in Xenopus oocytes. It may participate in regulating MAPK cascades during host-parasite interactions. Length = 280

>gnl|CDD|133200 cd05069, PTKc_Yes, Catalytic domain of the Protein Tyrosine Kinase, Yes

 Score = 81.3 bits (200), Expect = 5e-17
 Identities = 75/273 (27%), Positives = 129/273 (47%), Gaps = 35/273 (12%)

Query: 372 IGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGT---RAFLAEISSLGRLKHKSLVGLRG 428
           +G G  G+V+ G   G   ++A+K +      GT    AFL E   + +L+H  LV L  
Sbjct: 14  LGQGCFGEVWMGTWNGT-TKVAIKTLK----PGTMMPEAFLQEAQIMKKLRHDKLVPLYA 68

Query: 429 WCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKK 488
               E   + +V ++M  GSL  ++ + DG   L   + + +   +A G+ Y+       
Sbjct: 69  VVSEE--PIYIVTEFMGKGSLLDFLKEGDGKY-LKLPQLVDMAAQIADGMAYIER---MN 122

Query: 489 VLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRAST 548
            +HRD++++N+L+   +  ++ DFGLAR+    +  +       + + APE    GR + 
Sbjct: 123 YIHRDLRAANILVGDNLVCKIADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTI 182

Query: 549 QTDVFGFGILILEVLS-GRRPIEEGKPNLVEMVWELMVQGKLLDALDA--RLRAKGGFDE 605
           ++DV+ FGIL+ E+++ GR P            +  MV  ++L+ ++   R+    G  E
Sbjct: 183 KSDVWSFGILLTELVTKGRVP------------YPGMVNREVLEQVERGYRMPCPQGCPE 230

Query: 606 DEVERVLH-LGLLCAYPDPRARPTMRQVVKVLE 637
                 LH L  LC   DP  RPT   +   LE
Sbjct: 231 S-----LHELMKLCWKKDPDERPTFEYIQSFLE 258

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. c-Yes kinase is the cellular homolog of the oncogenic protein (v-Yes) encoded by the Yamaguchi 73 and Esh sarcoma viruses. It displays functional overlap with other Src subfamily members, particularly Src. It also shows some unique functions such as binding to occludins, transmembrane proteins that regulate extracellular interactions in tight junctions. Yes also associates with a number of proteins in different cell types that Src does not interact with, like JAK2 and gp130 in pre-adipocytes, and Pyk2 in treated pulmonary vein endothelial cells. Although the biological function of Yes remains unclear, it appears to have a role in regulating cell-cell interactions and vesicle trafficking in polarized cells. Length = 260

>gnl|CDD|173740 cd07842, STKc_CDK8_like, Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

 Score = 81.9 bits (203), Expect = 7e-17
 Identities = 71/233 (30%), Positives = 110/233 (47%), Gaps = 36/233 (15%)

Query: 365 GFSEENVIGVGGNGKVYKGVLEGG--GAEIAVKRI---SHENDGGTRAFLAEISSLGRLK 419
            +  E  IG G  G+VYK   + G  G E A+K+      +  G +++   EI+ L  LK
Sbjct: 1   KYEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELK 60

Query: 420 HKSLVGLRGWC-KREKGSLMLVYDYMENGSLDKW----------IFQCDGSMMLSCEERI 468
           H+++V L     +    S+ L++DY E+   D W                SM+ S     
Sbjct: 61  HENVVSLVEVFLEHADKSVYLLFDYAEH---DLWQIIKFHRQAKRVSIPPSMVKS----- 112

Query: 469 RVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLL--DKEMNGR--LGDFGLARMHGH--GQ 522
            +L  +  GV YLH  W   VLHRD+K +N+L+  +    G   +GD GLAR+       
Sbjct: 113 -LLWQILNGVHYLHSNW---VLHRDLKPANILVMGEGPERGVVKIGDLGLARLFNAPLKP 168

Query: 523 VASTTRVVGTVGYLAPEVFSSGRASTQT-DVFGFGILILEVLSGRRPIEEGKP 574
           +A    VV T+ Y APE+    R  T+  D++  G +  E+L+   PI +G+ 
Sbjct: 169 LADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLT-LEPIFKGRE 220

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA polymerase II (RNAP II)-dependent transcription. CDC2L6 also associates with Mediator in complexes lacking CDK8. In VP16-dependent transcriptional activation, CDK8 and CDC2L6 exerts opposing effects by positive and negative regulation, respectively, in similar conditions. Length = 316

>gnl|CDD|173739 cd07838, STKc_CDK4_6_like, Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

 Score = 81.1 bits (201), Expect = 7e-17
 Identities = 66/219 (30%), Positives = 112/219 (51%), Gaps = 21/219 (9%)

Query: 366 FSEENVIGVGGNGKVYKGVLEGGGAEIAVK--RISHENDGGTRAFLAEISSLGRLK---H 420
           + E   IG G  G VYK      G  +A+K  R+    +G   + L EI+ L +L+   H
Sbjct: 1   YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEH 60

Query: 421 KSLVGLRGWC-----KREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIR-VLKDV 474
            ++V L   C      RE   L LV+++++   L  ++ +C    +    E I+ +++ +
Sbjct: 61  PNIVRLLDVCHGPRTDREL-KLTLVFEHVDQ-DLATYLSKCPKPGL--PPETIKDLMRQL 116

Query: 475 AAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRVVGTVG 534
             GV +LH     +++HRD+K  N+L+  +   ++ DFGLAR++   ++A T+ VV T+ 
Sbjct: 117 LRGVDFLHS---HRIVHRDLKPQNILVTSDGQVKIADFGLARIYSF-EMALTSVVV-TLW 171

Query: 535 YLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGK 573
           Y APEV      +T  D++  G +  E L  RRP+  G 
Sbjct: 172 YRAPEVLLQSSYATPVDMWSVGCIFAE-LFRRRPLFRGT 209

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both expressed ubiquitously, associate with all three D cyclins (D1, D2 and D3), and phosphorylate the retinoblastoma (pRb) protein. They are also regulated by the INK4 family of inhibitors which associate with either the CDK alone or the CDK/cyclin complex. CDK4 and CDK6 show differences in subcellular localization, sensitivity to some inhibitors, timing in activation, tumor selectivity, and possibly substrate profiles. Although CDK4 and CDK6 seem to show some redundancy, they also have discrete, nonoverlapping functions. CDK6 plays an important role in cell differentiation. Length = 287

>gnl|CDD|173668 cd05577, STKc_GRK, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

 Score = 81.0 bits (200), Expect = 8e-17
 Identities = 58/205 (28%), Positives = 90/205 (43%), Gaps = 10/205 (4%)

Query: 372 IGVGGNGKVYKGVLEGGGAEIAVKRISHEN---DGGTRAFLAEISSLGRLKHKSLVGLRG 428
           +G GG G+V    ++  G   A K++  +      G +  L E   L ++  + +V L  
Sbjct: 1   LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSL-A 59

Query: 429 WCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKK 488
           +    K  L LV   M  G L   I+   G         I     +  G+ +LH+   ++
Sbjct: 60  YAFETKDDLCLVMTLMNGGDLKYHIYNV-GEPGFPEARAIFYAAQIICGLEHLHQ---RR 115

Query: 489 VLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRAST 548
           +++RD+K  NVLLD   N R+ D GLA     G+        GT GY+APEV        
Sbjct: 116 IVYRDLKPENVLLDDHGNVRISDLGLAVELKGGK--KIKGRAGTPGYMAPEVLQGEVYDF 173

Query: 549 QTDVFGFGILILEVLSGRRPIEEGK 573
             D F  G  + E+++GR P  + K
Sbjct: 174 SVDWFALGCTLYEMIAGRSPFRQRK 198

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of G protein signaling) homology (RH) domain and several motifs. The C-terminus diverges among different groups of GRKs. There are seven types of GRKs, named GRK1 to GRK7. They are subdivided into three main groups: visual (GRK1/7); beta-adrenergic receptor kinases (GRK2/3); and GRK4-like (GRK4/5/6). Expression of GRK2/3/5/6 is widespread while GRK1/4/7 show a limited tissue distribution. The substrate spectrum of the widely expressed GRKs partially overlaps. GRKs play important roles in the cardiovascular, immune, respiratory, skeletal, and nervous systems. Length = 277

>gnl|CDD|177649 PLN00009, PLN00009, cyclin-dependent kinase A; Provisional

 Score = 81.0 bits (200), Expect = 9e-17
 Identities = 70/214 (32%), Positives = 107/214 (50%), Gaps = 16/214 (7%)

Query: 372 IGVGGNGKVYKGVLEGGGAEIAVK--RISHENDGGTRAFLAEISSLGRLKHKSLVGLRGW 429
           IG G  G VYK         IA+K  R+  E++G     + EIS L  ++H ++V L+  
Sbjct: 10  IGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDV 69

Query: 430 CKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERI--RVLKDVAAGVLYLHEGWEK 487
              EK  L LV++Y++   L K     D S   +   R+    L  +  G+ Y H     
Sbjct: 70  VHSEK-RLYLVFEYLDL-DLKK---HMDSSPDFAKNPRLIKTYLYQILRGIAYCHS---H 121

Query: 488 KVLHRDIKSSNVLLDKEMNG-RLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRA 546
           +VLHRD+K  N+L+D+  N  +L DFGLAR  G      T  VV T+ Y APE+    R 
Sbjct: 122 RVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVV-TLWYRAPEILLGSRH 180

Query: 547 -STQTDVFGFGILILEVLSGRRPIEEGKPNLVEM 579
            ST  D++  G +  E+++ ++P+  G   + E+
Sbjct: 181 YSTPVDIWSVGCIFAEMVN-QKPLFPGDSEIDEL 213

Length = 294

>gnl|CDD|173730 cd06624, STKc_ASK, Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

 Score = 80.6 bits (199), Expect = 1e-16
 Identities = 67/228 (29%), Positives = 103/228 (45%), Gaps = 23/228 (10%)

Query: 358 EIEAATKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGR 417
           E E       E  V+G G  G VY          IA+K I   +    +    EI+    
Sbjct: 2   EYEYEYDENGERVVLGKGTYGIVYAARDLSTQVRIAIKEIPERDSRYVQPLHEEIALHSY 61

Query: 418 LKHKSLVGLRGWCKREKGSLMLVYDYMENGSLD-----KWIFQCDGSMMLSCEERIRVLK 472
           LKH+++V   G    E G   +  + +  GSL      KW     G +  + +  I   K
Sbjct: 62  LKHRNIVQYLG-SDSENGFFKIFMEQVPGGSLSALLRSKW-----GPLKDNEQTIIFYTK 115

Query: 473 DVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNG--RLGDFGLA-RMHGHGQVASTTRV 529
            +  G+ YLH+    +++HRDIK  NVL++   +G  ++ DFG + R+ G      T   
Sbjct: 116 QILEGLKYLHD---NQIVHRDIKGDNVLVNT-YSGVVKISDFGTSKRLAGINPCTET--F 169

Query: 530 VGTVGYLAPEVFSSGRA--STQTDVFGFGILILEVLSGRRP-IEEGKP 574
            GT+ Y+APEV   G        D++  G  I+E+ +G+ P IE G+P
Sbjct: 170 TGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELGEP 217

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. It plays important roles in cytokine and stress responses, as well as in reactive oxygen species (ROS)-mediated cellular responses. ASK1 is implicated in various diseases mediated by oxidative stress including inschemic heart disease, hypertension, vessel injury, brain ischemia, Fanconi anemia, asthma, and pulmonary edema, among others. ASK2 (also called MAPKKK6) functions only in a heteromeric complex with ASK1, and can activate ASK1 by direct phosphorylation. The function of MAPKKK15 is still unknown. Length = 268

>gnl|CDD|173758 cd08218, STKc_Nek1, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

 Score = 79.9 bits (197), Expect = 1e-16
 Identities = 56/189 (29%), Positives = 103/189 (54%), Gaps = 12/189 (6%)

Query: 391 EIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLD 450
           EI + ++S +    +R    E++ L  +KH ++V  +     E G+L +V DY E G L 
Sbjct: 32  EINISKMSPKEREESRK---EVAVLSNMKHPNIVQYQE-SFEENGNLYIVMDYCEGGDLY 87

Query: 451 KWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLG 510
           K I    G ++   ++ +     +   + ++H+   +K+LHRDIKS N+ L K+   +LG
Sbjct: 88  KKINAQRG-VLFPEDQILDWFVQICLALKHVHD---RKILHRDIKSQNIFLTKDGTIKLG 143

Query: 511 DFGLAR-MHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPI 569
           DFG+AR ++   ++A T   +GT  YL+PE+  +   + ++D++  G ++ E+ + +   
Sbjct: 144 DFGIARVLNSTVELART--CIGTPYYLSPEICENRPYNNKSDIWALGCVLYEMCTLKHAF 201

Query: 570 EEGK-PNLV 577
           E G   NLV
Sbjct: 202 EAGNMKNLV 210

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycystic kidney disease, which is characterized by benign polycystic tumors formed by abnormal overgrowth of renal epithelial cells. It appears also to be involved in DNA damage response, and may be important for both correct DNA damage checkpoint activation and DNA repair. Length = 256

>gnl|CDD|173650 cd05094, PTKc_TrkC, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

 Score = 80.8 bits (199), Expect = 1e-16
 Identities = 67/267 (25%), Positives = 131/267 (49%), Gaps = 47/267 (17%)

Query: 392 IAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDK 451
           +AVK +        + F  E   L  L+H+ +V   G C  +   L++V++YM++G L+K
Sbjct: 38  VAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCG-DGDPLIMVFEYMKHGDLNK 96

Query: 452 WI---------------FQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKS 496
           ++                Q  G + LS  + + +   +A+G++YL     +  +HRD+ +
Sbjct: 97  FLRAHGPDAMILVDGQPRQAKGELGLS--QMLHIASQIASGMVYLAS---QHFVHRDLAT 151

Query: 497 SNVLLDKEMNGRLGDFGLARMHGHGQVASTT--RVVG----TVGYLAPEVFSSGRASTQT 550
            N L+   +  ++GDFG++R      V ST   RV G     + ++ PE     + +T++
Sbjct: 152 RNCLVGANLLVKIGDFGMSR-----DVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTES 206

Query: 551 DVFGFGILILEVLS-GRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRAKGGFDEDEVE 609
           DV+ FG+++ E+ + G++P  +        V E + QG++L+    R+  K  +D     
Sbjct: 207 DVWSFGVILWEIFTYGKQPWFQLSNTE---VIECITQGRVLER--PRVCPKEVYD----- 256

Query: 610 RVLHLGLLCAYPDPRARPTMRQVVKVL 636
             + LG  C   +P+ R  ++++ K+L
Sbjct: 257 --IMLG--CWQREPQQRLNIKEIYKIL 279

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some non-neural tissues including the developing heart. NT3/TrkC signaling plays an important role in the innervation of the cardiac conducting system and the development of smooth muscle cells. Mice deficient with NT3 and TrkC have multiple heart defects. NT3/TrkC signaling is also critical for the development and maintenance of enteric neurons that are important for the control of gut peristalsis. Length = 291

>gnl|CDD|132961 cd06630, STKc_MEKK1, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

 Score = 80.3 bits (198), Expect = 1e-16
 Identities = 56/222 (25%), Positives = 101/222 (45%), Gaps = 45/222 (20%)

Query: 371 VIGVGGNGKVYKGVLEGGGAEIAVKRISH------ENDGGTRAFLAEISSLGRLKHKSLV 424
            +G G     Y+      G  +AVK++++      E +    A   EI  + RL H  ++
Sbjct: 7   QLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHII 66

Query: 425 GLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLS----CEERI--RVLKDVAAGV 478
            + G    E     L  ++M  GS+         S +LS     +E +     + +  G+
Sbjct: 67  RMLG-ATCEDSHFNLFVEWMAGGSV---------SHLLSKYGAFKEAVIINYTEQLLRGL 116

Query: 479 LYLHEGWEKKVLHRDIKSSNVLLDKE-MNGRLGDFGLARMHGHGQVASTT--------RV 529
            YLHE    +++HRD+K +N+L+D      R+ DFG A      ++A+          ++
Sbjct: 117 SYLHE---NQIIHRDVKGANLLIDSTGQRLRIADFGAA-----ARLAAKGTGAGEFQGQL 168

Query: 530 VGTVGYLAPEVF---SSGRASTQTDVFGFGILILEVLSGRRP 568
           +GT+ ++APEV      GR+    DV+  G +I+E+ + + P
Sbjct: 169 LGTIAFMAPEVLRGEQYGRSC---DVWSVGCVIIEMATAKPP 207

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their respective MAPKKs, MEK1/2 and MKK4/MKK7, respectively. MEKK1 is important in regulating cell survival and apoptosis. MEKK1 also plays a role in cell migration, tissue maintenance and homeostasis, and wound healing. Length = 268

>gnl|CDD|133212 cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

 Score = 80.6 bits (199), Expect = 1e-16
 Identities = 67/262 (25%), Positives = 119/262 (45%), Gaps = 26/262 (9%)

Query: 389 GAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWC-KREKGSLMLVYDYMENG 447
           G  +AVK++ H      R F  EI  L  L+H ++V  +G C    + +L LV +Y+  G
Sbjct: 33  GEVVAVKKLQHSTAEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLRLVMEYLPYG 92

Query: 448 SLDKWIFQ----CDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDK 503
           SL  ++ +     D   +L    +I        G+ YL     K+ +HRD+ + N+L++ 
Sbjct: 93  SLRDYLQKHRERLDHRKLLLYASQI------CKGMEYLGS---KRYVHRDLATRNILVES 143

Query: 504 EMNGRLGDFGLARMHGHGQVASTTRVVGT--VGYLAPEVFSSGRASTQTDVFGFGILILE 561
           E   ++GDFGL ++    +     R  G   + + APE  +  + S  +DV+ FG+++ E
Sbjct: 144 ENRVKIGDFGLTKVLPQDKEYYKVREPGESPIFWYAPESLTESKFSVASDVWSFGVVLYE 203

Query: 562 VLS----GRRPIEEGKPNLVEMVWELMVQGKLLDAL--DARLRAKGGFDEDEVERVLHLG 615
           + +       P  E    +       M+   L++ L  + RL A  G    E+  ++   
Sbjct: 204 LFTYSDKSCSPPAEFMRMMGNDKQGQMIVYHLIELLKNNGRLPAPPGC-PAEIYAIM--- 259

Query: 616 LLCAYPDPRARPTMRQVVKVLE 637
             C   DP  RP+  ++   +E
Sbjct: 260 KECWNNDPSQRPSFSELALQVE 281

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak2 is widely expressed in many tissues while Jak3 is expressed only in hematopoietic cells. Jak2 is essential for the signaling of hormone-like cytokines such as growth hormone, erythropoietin, thrombopoietin, and prolactin, as well as some IFNs and cytokines that signal through the IL-3 and gp130 receptors. Jak3 binds the shared receptor subunit common gamma chain and thus, is essential in the signaling of cytokines that use it such as IL-2, IL-4, IL-7, IL-9, IL-15, and IL-21. Disruption of Jak2 in mice results in an embryonic lethal phenotype with multiple defects including erythropoietic and cardiac abnormalities. It is the only Jak gene that results in a lethal phenotype when disrupted in mice. A mutation in the pseudokinase domain of Jak2, V617F, is present in many myeloproliferative diseases, including almost all patients with polycythemia vera, and 50% of patients with essential thrombocytosis and myelofibrosis. Jak3 is important in lymphoid development and myeloid cell differentiation. Inactivating mutations in Jak3 have been reported in humans with severe combined immunodeficiency (SCID). Length = 284

>gnl|CDD|173751 cd07860, STKc_CDK2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

 Score = 80.2 bits (198), Expect = 2e-16
 Identities = 62/198 (31%), Positives = 97/198 (48%), Gaps = 10/198 (5%)

Query: 372 IGVGGNGKVYKGVLEGGGAEIAVK--RISHENDGGTRAFLAEISSLGRLKHKSLVGLRGW 429
           IG G  G VYK   +  G  +A+K  R+  E +G     + EIS L  L H ++V L   
Sbjct: 8   IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 67

Query: 430 CKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKV 489
              E   L LV++++ +  L K++     S  +        L  +  G+ + H     +V
Sbjct: 68  IHTEN-KLYLVFEFL-HQDLKKFMDASPLSG-IPLPLIKSYLFQLLQGLAFCHS---HRV 121

Query: 490 LHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGR-AST 548
           LHRD+K  N+L++ E   +L DFGLAR  G   V + T  V T+ Y APE+    +  ST
Sbjct: 122 LHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYTHEVVTLWYRAPEILLGCKYYST 180

Query: 549 QTDVFGFGILILEVLSGR 566
             D++  G +  E+++ R
Sbjct: 181 AVDIWSLGCIFAEMVTRR 198

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex plays a role in regulating DNA replication. CDK2, together with CDK4, also regulates embryonic cell proliferation. Despite these important roles, mice deleted for the cdk2 gene are viable and normal except for being sterile. This may be due to compensation provided by CDK1 (also called Cdc2), which can also bind cyclin E and drive the G1 to S phase transition. CDK3 is regulated by cyclin C and it phosphorylates pRB specifically during the G0/G1 transition. This phosphorylation is required for cells to exit G0 efficiently and enter the G1 phase. Length = 284

>gnl|CDD|143376 cd07871, STKc_PCTAIRE3, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase

 Score = 80.1 bits (197), Expect = 2e-16
 Identities = 61/197 (30%), Positives = 107/197 (54%), Gaps = 10/197 (5%)

Query: 372 IGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTR-AFLAEISSLGRLKHKSLVGLRGWC 430
           +G G    V+KG  +     +A+K I  E++ G     + E+S L  LKH ++V L    
Sbjct: 13  LGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKNLKHANIVTLHDII 72

Query: 431 KREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVL 490
             E+  L LV++Y+++  L +++  C G++M     +I + + +  G+ Y H+   +K+L
Sbjct: 73  HTER-CLTLVFEYLDS-DLKQYLDNC-GNLMSMHNVKIFMFQ-LLRGLSYCHK---RKIL 125

Query: 491 HRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEV-FSSGRASTQ 549
           HRD+K  N+L++++   +L DFGLAR         +  VV T+ Y  P+V   S   ST 
Sbjct: 126 HRDLKPQNLLINEKGELKLADFGLARAKSVPTKTYSNEVV-TLWYRPPDVLLGSTEYSTP 184

Query: 550 TDVFGFGILILEVLSGR 566
            D++G G ++ E+ +GR
Sbjct: 185 IDMWGVGCILYEMATGR 201

Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filaments (PHFs) and stimulate Tau phosphorylation. As AD progresses, phosphorylated Tau aggregates and forms PHFs, which leads to the formation of neurofibrillary tangles (NFTs). In human glioma cells, PCTAIRE-3 induces cell cycle arrest and cell death. Length = 288

>gnl|CDD|173649 cd05093, PTKc_TrkB, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

 Score = 79.3 bits (195), Expect = 4e-16
 Identities = 66/241 (27%), Positives = 122/241 (50%), Gaps = 34/241 (14%)

Query: 372 IGVGGNGKV-----YKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGL 426
           +G G  GKV     Y    E     +AVK +   +D   + F  E   L  L+H+ +V  
Sbjct: 13  LGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKF 72

Query: 427 RGWCKREKGSLMLVYDYMENGSLDKWI--FQCDGSMM--------LSCEERIRVLKDVAA 476
            G C  E   L++V++YM++G L+K++     D  +M        L+  + + + + +AA
Sbjct: 73  YGVCV-EGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAA 131

Query: 477 GVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTT--RVVG--- 531
           G++YL     +  +HRD+ + N L+ + +  ++GDFG++R      V ST   RV G   
Sbjct: 132 GMVYLAS---QHFVHRDLATRNCLVGENLLVKIGDFGMSR-----DVYSTDYYRVGGHTM 183

Query: 532 -TVGYLAPEVFSSGRASTQTDVFGFGILILEVLS-GRRPIEEGKPNLVEMVWELMVQGKL 589
             + ++ PE     + +T++DV+  G+++ E+ + G++P  +   N    V E + QG++
Sbjct: 184 LPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNN---EVIECITQGRV 240

Query: 590 L 590
           L
Sbjct: 241 L 241

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly expressed in the nervous system and in some non-neural tissues. It plays important roles in cell proliferation, differentiation, and survival. BDNF/Trk signaling plays a key role in regulating activity-dependent synaptic plasticity. TrkB also contributes to protection against gp120-induced neuronal cell death. TrkB overexpression is associated with poor prognosis in neuroblastoma (NB) and other human cancers. It acts as a suppressor of anoikis (detachment-induced apoptosis) and contributes to tumor metastasis. Length = 288

>gnl|CDD|143378 cd07873, STKc_PCTAIRE1, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase

 Score = 78.9 bits (194), Expect = 5e-16
 Identities = 65/199 (32%), Positives = 105/199 (52%), Gaps = 14/199 (7%)

Query: 372 IGVGGNGKVYKGVLEGGGAEIAVK--RISHENDGGTRAFLAEISSLGRLKHKSLVGLRGW 429
           +G G    VYKG  +     +A+K  R+ HE +G     + E+S L  LKH ++V L   
Sbjct: 14  LGEGTYATVYKGRSKLTDNLVALKEIRLEHE-EGAPCTAIREVSLLKDLKHANIVTLHDI 72

Query: 430 CKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRV-LKDVAAGVLYLHEGWEKK 488
              EK SL LV++Y++   L +++  C  S+ +     +++ L  +  G+ Y H    +K
Sbjct: 73  IHTEK-SLTLVFEYLDK-DLKQYLDDCGNSINM---HNVKLFLFQLLRGLNYCHR---RK 124

Query: 489 VLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEV-FSSGRAS 547
           VLHRD+K  N+L+++    +L DFGLAR         +  VV T+ Y  P++   S   S
Sbjct: 125 VLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYSNEVV-TLWYRPPDILLGSTDYS 183

Query: 548 TQTDVFGFGILILEVLSGR 566
           TQ D++G G +  E+ +GR
Sbjct: 184 TQIDMWGVGCIFYEMSTGR 202

Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may play a role in regulating neurite outgrowth. It can also associate with Trap (Tudor repeat associator with PCTAIRE-2), a physiological partner of PCTAIRE-2; with p11, a small dimeric protein with similarity to S100; and with 14-3-3 proteins, mediators of phosphorylation-dependent interactions in many different proteins. Length = 301

>gnl|CDD|143349 cd07844, STKc_PCTAIRE_like, Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

 Score = 79.0 bits (195), Expect = 5e-16
 Identities = 68/203 (33%), Positives = 106/203 (52%), Gaps = 20/203 (9%)

Query: 371 VIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLA--EISSLGRLKHKSLVGLRG 428
            +G G    VYKG  +  G  +A+K I  E++ G   F A  E S L  LKH ++V L  
Sbjct: 12  KLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEGA-PFTAIREASLLKDLKHANIVTLHD 70

Query: 429 WCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRV-LKDVAAGVLYLHEGWEK 487
               +K +L LV++Y++   L +++  C G + +     +R+ L  +  G+ Y H+   +
Sbjct: 71  IIHTKK-TLTLVFEYLDT-DLKQYMDDCGGGLSMH---NVRLFLFQLLRGLAYCHQ---R 122

Query: 488 KVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTT---RVVGTVGYLAPEVF-SS 543
           +VLHRD+K  N+L+ +    +L DFGLAR      V S T    VV T+ Y  P+V   S
Sbjct: 123 RVLHRDLKPQNLLISERGELKLADFGLARAK---SVPSKTYSNEVV-TLWYRPPDVLLGS 178

Query: 544 GRASTQTDVFGFGILILEVLSGR 566
              ST  D++G G +  E+ +GR
Sbjct: 179 TEYSTSLDMWGVGCIFYEMATGR 201

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the membrane-associated cyclin Y. PCTAIRE-like proteins show unusual expression patterns with high levels in post-mitotic tissues, suggesting that they may be involved in regulating post-mitotic cellular events. Length = 291

>gnl|CDD|173630 cd05044, PTKc_c-ros, Catalytic domain of the Protein Tyrosine Kinase, C-ros

 Score = 78.0 bits (192), Expect = 6e-16
 Identities = 69/260 (26%), Positives = 116/260 (44%), Gaps = 55/260 (21%)

Query: 370 NVIGVGGNGKVYKG----VLEGGGAEI--AVKRISH-ENDGGTRAFLAEISSLGRLKHKS 422
           N +G G  G+VY+G    +L  G   I  AVK +     D   + FL E   +    H +
Sbjct: 1   NFLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNHPN 60

Query: 423 LVGLRGWCKREKGSLMLVYDYMENGSLDKWI----FQCDGSMMLSCEERIRVLKDVAAGV 478
           +V L G C        ++ + ME G L  ++     +  G  +L+ +E + +  DVA G 
Sbjct: 61  IVKLLGVC-LLNEPQYIIMELMEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGC 119

Query: 479 LYLHEGWEKKVLHRDIKSSNVLLDKEMNGR-----LGDFGLAR---------MHGHGQVA 524
           +YL +      +HRD+ + N L+ ++         +GDFGLAR           G G + 
Sbjct: 120 VYLEQ---MHFIHRDLAARNCLVSEKGYDADRVVKIGDFGLARDIYKSDYYRKEGEGLL- 175

Query: 525 STTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLS-GRRPI-------------E 570
                   V ++APE    G+ +TQ+DV+ FG+L+ E+L+ G++P               
Sbjct: 176 -------PVRWMAPESLLDGKFTTQSDVWSFGVLMWEILTLGQQPYPALNNQEVLQHVTA 228

Query: 571 EGK----PNLVEMVWELMVQ 586
            G+     N  + +++LM  
Sbjct: 229 GGRLQKPENCPDKIYQLMTN 248

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male mice bearing inactive mutations of c-ros lack the initial segment of the epididymis and are infertile. The Drosophila protein, Sevenless, is required for the specification of the R7 photoreceptor cell during eye development. Length = 269

>gnl|CDD|133220 cd05089, PTKc_Tie1, Catalytic domain of the Protein Tyrosine Kinase, Tie1

 Score = 78.5 bits (193), Expect = 7e-16
 Identities = 60/217 (27%), Positives = 114/217 (52%), Gaps = 31/217 (14%)

Query: 369 ENVIGVGGNGKVYKGVLEGGGAEIA-----VKRISHENDGGTRAFLAEISSLGRL-KHKS 422
           E+VIG G  G+V + +++  G ++      +K  + END   R F  E+  L +L  H +
Sbjct: 7   EDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASEND--HRDFAGELEVLCKLGHHPN 64

Query: 423 LVGLRGWCKREKGSLMLVYDYMENGSLDKW-----IFQCDGSM--------MLSCEERIR 469
           ++ L G C+  +G L +  +Y   G+L  +     + + D +          L+ ++ ++
Sbjct: 65  IINLLGACE-NRGYLYIAIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQ 123

Query: 470 VLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRV 529
              DVA G+ YL E   K+ +HRD+ + NVL+ + +  ++ DFGL+R    G+     + 
Sbjct: 124 FASDVATGMQYLSE---KQFIHRDLAARNVLVGENLASKIADFGLSR----GEEVYVKKT 176

Query: 530 VG--TVGYLAPEVFSSGRASTQTDVFGFGILILEVLS 564
           +G   V ++A E  +    +T++DV+ FG+L+ E++S
Sbjct: 177 MGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWEIVS 213

Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations. In vivo studies of Tie1 show that it is critical in vascular development. Length = 297

>gnl|CDD|173736 cd07832, STKc_CCRK, Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

 Score = 78.5 bits (194), Expect = 7e-16
 Identities = 51/198 (25%), Positives = 91/198 (45%), Gaps = 10/198 (5%)

Query: 372 IGVGGNGKVYKGVLEGGGAEIAVKRIS--HENDGGTRAFLAEISSLGRLKHKSLVGLRGW 429
           IG G +G V+K      G  +A+K+++      G     L EI +L   +H  +V L   
Sbjct: 8   IGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQHPYVVKLLD- 66

Query: 430 CKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKV 489
                   +LV +YM    L + +   D    L   +    ++ +  GV Y+H      +
Sbjct: 67  VFPHGSGFVLVMEYMP-SDLSEVL--RDEERPLPEAQVKSYMRMLLKGVAYMHA---NGI 120

Query: 490 LHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEV-FSSGRAST 548
           +HRD+K +N+L+  +   ++ DFGLAR+    +    +  V T  Y APE+ + + +   
Sbjct: 121 MHRDLKPANLLISADGVLKIADFGLARLFSEEEPRLYSHQVATRWYRAPELLYGARKYDP 180

Query: 549 QTDVFGFGILILEVLSGR 566
             D++  G +  E+L+G 
Sbjct: 181 GVDLWAVGCIFAELLNGS 198

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of heart failure. Length = 286

>gnl|CDD|132984 cd06653, STKc_MEKK3_like_1, Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

 Score = 77.8 bits (191), Expect = 8e-16
 Identities = 66/214 (30%), Positives = 98/214 (45%), Gaps = 24/214 (11%)

Query: 371 VIGVGGNGKVYKGVLEGGGAEIAVKRI-----SHENDGGTRAFLAEISSLGRLKHKSLVG 425
           ++G G  G+VY       G E+AVK++     S E      A   EI  L  L+H  +V 
Sbjct: 9   LLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQ 68

Query: 426 LRGWCKR--EKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHE 483
             G C R  E+  L +  +YM  GS+     Q      L+     R  + +  GV YLH 
Sbjct: 69  YYG-CLRDPEEKKLSIFVEYMPGGSIKD---QLKAYGALTENVTRRYTRQILQGVSYLHS 124

Query: 484 GWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLAR------MHGHGQVASTTRVVGTVGYLA 537
                ++HRDIK +N+L D   N +LGDFG ++      M G G       V GT  +++
Sbjct: 125 ---NMIVHRDIKGANILRDSAGNVKLGDFGASKRIQTICMSGTG----IKSVTGTPYWMS 177

Query: 538 PEVFSSGRASTQTDVFGFGILILEVLSGRRPIEE 571
           PEV S      + DV+     ++E+L+ + P  E
Sbjct: 178 PEVISGEGYGRKADVWSVACTVVEMLTEKPPWAE 211

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK2 and MEKK3 activate MEK5 (also called MKK5), which activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. MEKK2 and MEKK3 can also activate the MAPKs, c-Jun N-terminal kinase (JNK) and p38, through their respective MAPKKs. Length = 264

>gnl|CDD|132982 cd06651, STKc_MEKK3, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

 Score = 77.8 bits (191), Expect = 8e-16
 Identities = 63/214 (29%), Positives = 103/214 (48%), Gaps = 24/214 (11%)

Query: 371 VIGVGGNGKVYKGVLEGGGAEIAVKRI-----SHENDGGTRAFLAEISSLGRLKHKSLVG 425
           ++G G  G+VY       G E+A K++     S E      A   EI  L  L+H+ +V 
Sbjct: 9   LLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQ 68

Query: 426 LRGWCKREKG--SLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHE 483
             G C R++   +L +  +YM  GS+   + +  G++  S   +    + +  G+ YLH 
Sbjct: 69  YYG-CLRDRAEKTLTIFMEYMPGGSVKDQL-KAYGALTESVTRK--YTRQILEGMSYLHS 124

Query: 484 GWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLAR------MHGHGQVASTTRVVGTVGYLA 537
                ++HRDIK +N+L D   N +LGDFG ++      M G G       V GT  +++
Sbjct: 125 ---NMIVHRDIKGANILRDSAGNVKLGDFGASKRLQTICMSGTG----IRSVTGTPYWMS 177

Query: 538 PEVFSSGRASTQTDVFGFGILILEVLSGRRPIEE 571
           PEV S      + DV+  G  ++E+L+ + P  E
Sbjct: 178 PEVISGEGYGRKADVWSLGCTVVEMLTEKPPWAE 211

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. In addition, MEKK3 is involved in interleukin-1 receptor and Toll-like receptor 4 signaling. It is also a specific regulator of the proinflammatory cytokines IL-6 and GM-CSF in some immune cells. MEKK3 also regulates calcineurin, which plays a critical role in T cell activation, apoptosis, skeletal myocyte differentiation, and cardiac hypertrophy. Length = 266

>gnl|CDD|133204 cd05073, PTKc_Hck, Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

 Score = 77.8 bits (191), Expect = 8e-16
 Identities = 66/270 (24%), Positives = 128/270 (47%), Gaps = 23/270 (8%)

Query: 369 ENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRG 428
           E  +G G  G+V+         ++AVK +         AFLAE + +  L+H  LV L  
Sbjct: 11  EKKLGAGQFGEVWMATYNKH-TKVAVKTMK-PGSMSVEAFLAEANVMKTLQHDKLVKLHA 68

Query: 429 WCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKK 488
              +E   + ++ ++M  GSL  ++   +GS      + I     +A G+ ++ +   + 
Sbjct: 69  VVTKE--PIYIITEFMAKGSLLDFLKSDEGSKQ-PLPKLIDFSAQIAEGMAFIEQ---RN 122

Query: 489 VLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRAST 548
            +HRD++++N+L+   +  ++ DFGLAR+    +  +       + + APE  + G  + 
Sbjct: 123 YIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTI 182

Query: 549 QTDVFGFGILILEVLS-GRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRAKGGFDEDE 607
           ++DV+ FGIL++E+++ GR P            +  M   +++ AL+   R      E+ 
Sbjct: 183 KSDVWSFGILLMEIVTYGRIP------------YPGMSNPEVIRALERGYRMPR--PENC 228

Query: 608 VERVLHLGLLCAYPDPRARPTMRQVVKVLE 637
            E + ++ + C    P  RPT   +  VL+
Sbjct: 229 PEELYNIMMRCWKNRPEERPTFEYIQSVLD 258

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Hck is present in myeloid and lymphoid cells that play a role in the development of cancer. It may be important in the oncogenic signaling of the protein Tel-Abl, which induces a chronic myelogenous leukemia (CML)-like disease. Hck also acts as a negative regulator of granulocyte colony-stimulating factor (G-CSF)-induced proliferation of granulocytic precursors, suggesting a possible role in the development of acute myeloid leukemia (AML). In addition, Hck is essential in regulating the degranulation of polymorphonuclear leukocytes (PMNs). Genetic polymorphisms affect the expression level of Hck, which affects PMN mediator release and influences the development of chronic obstructive pulmonary disease (COPD). Length = 260

>gnl|CDD|173727 cd06613, STKc_MAP4K3_like, Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

 Score = 77.3 bits (191), Expect = 9e-16
 Identities = 64/212 (30%), Positives = 99/212 (46%), Gaps = 22/212 (10%)

Query: 366 FSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVG 425
           +     IG G  G VYK      G  +A+K I  E          EIS L   +H ++V 
Sbjct: 5   YELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPGDDFEIIQQEISMLKECRHPNIVA 64

Query: 426 LRG-WCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIR-VLKDVAAGVLYLHE 483
             G + +R+K  L +V +Y   GSL        G   LS E +I  V ++   G+ YLHE
Sbjct: 65  YFGSYLRRDK--LWIVMEYCGGGSLQDIYQVTRGP--LS-ELQIAYVCRETLKGLAYLHE 119

Query: 484 GWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVAST----TRVVGTVGYLAPE 539
                 +HRDIK +N+LL ++ + +L DFG++      Q+ +T       +GT  ++APE
Sbjct: 120 ---TGKIHRDIKGANILLTEDGDVKLADFGVS-----AQLTATIAKRKSFIGTPYWMAPE 171

Query: 540 VF---SSGRASTQTDVFGFGILILEVLSGRRP 568
           V      G    + D++  GI  +E+   + P
Sbjct: 172 VAAVERKGGYDGKCDIWALGITAIELAELQPP 203

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K1, also called haematopoietic progenitor kinase 1 (HPK1), is a hematopoietic-specific STK involved in many cellular signaling cascades including MAPK, antigen receptor, apoptosis, growth factor, and cytokine signaling. It participates in the regulation of T cell receptor signaling and T cell-mediated immune responses. MAP4K2 was referred to as germinal center (GC) kinase because of its preferred location in GC B cells. MAP4K3 plays a role in the nutrient-responsive pathway of mTOR (mammalian target of rapamycin) signaling. It is required in the activation of S6 kinase by amino acids and for the phosphorylation of the mTOR-regulated inhibitor of eukaryotic initiation factor 4E. MAP4K5, also called germinal center kinase-related enzyme (GCKR), has been shown to activate the MAPK c-Jun N-terminal kinase (JNK). Length = 262

>gnl|CDD|132986 cd06655, STKc_PAK2, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

 Score = 77.8 bits (191), Expect = 1e-15
 Identities = 59/215 (27%), Positives = 105/215 (48%), Gaps = 17/215 (7%)

Query: 364 KGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSL 423
           K ++    IG G +G V+  +    G E+A+K+I+ +        + EI  +  LK+ ++
Sbjct: 19  KKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQPKKELIINEILVMKELKNPNI 78

Query: 424 VG-LRGWCKREKGSLMLVYDYMENGSLDKWIFQC---DGSMMLSCEERIRVLKDVAAGVL 479
           V  L  +   ++  L +V +Y+  GSL   + +    +  +   C E ++ L+       
Sbjct: 79  VNFLDSFLVGDE--LFVVMEYLAGGSLTDVVTETCMDEAQIAAVCRECLQALE------- 129

Query: 480 YLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPE 539
           +LH     +V+HRDIKS NVLL  + + +L DFG        Q   +T +VGT  ++APE
Sbjct: 130 FLHA---NQVIHRDIKSDNVLLGMDGSVKLTDFGFCAQITPEQSKRST-MVGTPYWMAPE 185

Query: 540 VFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKP 574
           V +      + D++  GI+ +E++ G  P     P
Sbjct: 186 VVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENP 220

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK2 plays a role in pro-apoptotic signaling. It is cleaved and activated by caspases leading to morphological changes during apoptosis. PAK2 is also activated in response to a variety of stresses including DNA damage, hyperosmolarity, serum starvation, and contact inhibition, and may play a role in coordinating the stress response. PAK2 also contributes to cancer cell invasion through a mechanism distinct from that of PAK1. Length = 296

>gnl|CDD|132983 cd06652, STKc_MEKK2, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

 Score = 77.0 bits (189), Expect = 1e-15
 Identities = 62/214 (28%), Positives = 101/214 (47%), Gaps = 24/214 (11%)

Query: 371 VIGVGGNGKVYKGVLEGGGAEIAVKRI-----SHENDGGTRAFLAEISSLGRLKHKSLVG 425
           ++G G  G+VY       G E+AVK++     S E      A   EI  L  L H+ +V 
Sbjct: 9   LLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQ 68

Query: 426 LRGWCKRE--KGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHE 483
             G C R+  + +L +  ++M  GS+     Q      L+     +  + +  GV YLH 
Sbjct: 69  YYG-CLRDPMERTLSIFMEHMPGGSIKD---QLKSYGALTENVTRKYTRQILEGVSYLHS 124

Query: 484 GWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLAR------MHGHGQVASTTRVVGTVGYLA 537
                ++HRDIK +N+L D   N +LGDFG ++      + G G  +    V GT  +++
Sbjct: 125 ---NMIVHRDIKGANILRDSVGNVKLGDFGASKRLQTICLSGTGMKS----VTGTPYWMS 177

Query: 538 PEVFSSGRASTQTDVFGFGILILEVLSGRRPIEE 571
           PEV S      + D++  G  ++E+L+ + P  E
Sbjct: 178 PEVISGEGYGRKADIWSVGCTVVEMLTEKPPWAE 211

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their respective MAPKKs MEK1/2, JNK-activating kinase 2 (JNKK2), and MKK3/6. MEKK2 plays roles in T cell receptor signaling, immune synapse formation, cytokine gene expression, as well as in EGF and FGF receptor signaling. Length = 265

>gnl|CDD|173737 cd07834, STKc_MAPK, Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

 Score = 78.0 bits (193), Expect = 2e-15
 Identities = 65/215 (30%), Positives = 103/215 (47%), Gaps = 29/215 (13%)

Query: 370 NVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDG---GTRAFLAEISSLGRLKHKSLVGL 426
             IG G  G V   V +  G ++A+K+IS+  D      R  L EI  L  L+H++++GL
Sbjct: 6   KPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRI-LREIKLLRHLRHENIIGL 64

Query: 427 R---GWCKREK-GSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIR-----VLKDVAAG 477
                    E    + +V + ME   L K I        L+ ++ I+     +L+    G
Sbjct: 65  LDILRPPSPEDFNDVYIVTELMET-DLHKVIKS---PQPLT-DDHIQYFLYQILR----G 115

Query: 478 VLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLAR--MHGHGQVASTTRVVGTVGY 535
           + YLH      V+HRD+K SN+L++   + ++ DFGLAR       +    T  V T  Y
Sbjct: 116 LKYLHSA---NVIHRDLKPSNILVNSNCDLKICDFGLARGVDPDEDEKGFLTEYVVTRWY 172

Query: 536 LAPEV-FSSGRASTQTDVFGFGILILEVLSGRRPI 569
            APE+  SS R +   D++  G +  E+L  R+P+
Sbjct: 173 RAPELLLSSSRYTKAIDIWSVGCIFAELL-TRKPL 206

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPK kinase (MAP2K or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAP3K or MKKK). Each cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. There are three main typical MAPK subfamilies: Extracellular signal-Regulated Kinase (ERK), c-Jun N-terminal Kinase (JNK), and p38. Some MAPKs are atypical in that they are not regulated by MAP2Ks. These include MAPK4, MAPK6, NLK, and ERK7. Length = 330

>gnl|CDD|173721 cd05632, STKc_GRK5, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

 Score = 77.3 bits (190), Expect = 2e-15
 Identities = 64/211 (30%), Positives = 98/211 (46%), Gaps = 10/211 (4%)

Query: 366 FSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHE---NDGGTRAFLAEISSLGRLKHKS 422
           F +  V+G GG G+V    +   G   A KR+  +      G    L E   L ++  + 
Sbjct: 2   FRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQF 61

Query: 423 LVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLH 482
           +V L  +    K +L LV   M  G L   I+   G+     E  +    ++  G+  LH
Sbjct: 62  VVNL-AYAYETKDALCLVLTIMNGGDLKFHIYNM-GNPGFEEERALFYAAEILCGLEDLH 119

Query: 483 EGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFS 542
               +  ++RD+K  N+LLD   + R+ D GLA     G+  S    VGTVGY+APEV +
Sbjct: 120 R---ENTVYRDLKPENILLDDYGHIRISDLGLAVKIPEGE--SIRGRVGTVGYMAPEVLN 174

Query: 543 SGRASTQTDVFGFGILILEVLSGRRPIEEGK 573
           + R +   D +G G LI E++ G+ P    K
Sbjct: 175 NQRYTLSPDYWGLGCLIYEMIEGQSPFRGRK 205

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with the membrane though an N-terminal PIP2 binding domain and also binds phospholipids via its C-terminus. GRK5 deficiency is associated with early Alzheimer's disease in humans and mouse models. GRK5 also plays a crucial role in the pathogenesis of sporadic Parkinson's disease. It participates in the regulation and desensitization of PDGFRbeta, a receptor tyrosine kinase involved in a variety of downstream cellular effects including cell growth, chemotaxis, apoptosis, and angiogenesis. GRK5 also regulates Toll-like receptor 4, which is involved in innate and adaptive immunity. Length = 285

>gnl|CDD|173634 cd05053, PTKc_FGFR, Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

 Score = 77.5 bits (191), Expect = 2e-15
 Identities = 81/294 (27%), Positives = 137/294 (46%), Gaps = 46/294 (15%)

Query: 372 IGVGGNGKVYKGVLEG-----GGAEIAVKRI---SHENDGGTRAFLAEISSLGRL-KHKS 422
           +G G  G+V K    G       + +AVK +   + E D      ++E+  +  + KHK+
Sbjct: 20  LGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKD--LSDLVSEMEMMKMIGKHKN 77

Query: 423 LVGLRGWCKREKGSLMLVYDYMENGSLDKWI-------FQCDGSMMLSCEERIRVLKD-- 473
           ++ L G C +E G L +V +Y  +G+L  ++                  EE +   KD  
Sbjct: 78  IINLLGVCTQE-GPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLT-QKDLV 135

Query: 474 -----VAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLAR-MHGHGQVASTT 527
                VA G+ +L     KK +HRD+ + NVL+ ++   ++ DFGLAR +H       TT
Sbjct: 136 SFAYQVARGMEFLAS---KKCIHRDLAARNVLVTEDHVMKIADFGLARDIHHIDYYRKTT 192

Query: 528 RVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLS-GRRPIEEGKPNLVEMVWELMVQ 586
                V ++APE       + Q+DV+ FG+L+ E+ + G  P   G P  VE +++L+ +
Sbjct: 193 NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPY-PGIP--VEELFKLLKE 249

Query: 587 GKLLDALDARLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLEGKI 640
           G  ++        K      E   + HL   C +  P  RPT +Q+V+ L+  +
Sbjct: 250 GYRME--------KPQNCTQE---LYHLMRDCWHEVPSQRPTFKQLVEDLDRML 292

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation, and intracellular signaling. There are at least 23 FGFs and four types of FGFRs. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. FGF/FGFR signaling is important in the regulation of embryonic development, homeostasis, and regenerative processes. Depending on the cell type and stage, FGFR signaling produces diverse cellular responses including proliferation, growth arrest, differentiation, and apoptosis. Aberrant signaling leads to many human diseases such as skeletal, olfactory, and metabolic disorders, as well as cancer. Length = 293

>gnl|CDD|173641 cd05072, PTKc_Lyn, Catalytic domain of the Protein Tyrosine Kinase, Lyn

 Score = 77.0 bits (189), Expect = 2e-15
 Identities = 55/198 (27%), Positives = 104/198 (52%), Gaps = 8/198 (4%)

Query: 372 IGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCK 431
           +G G  G+V+ G       ++AVK +        +AFL E + +  L+H  LV L     
Sbjct: 14  LGAGQFGEVWMGYYNNS-TKVAVKTLK-PGTMSVQAFLEEANLMKTLQHDKLVRLYAVVT 71

Query: 432 REKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLH 491
           +E+  + ++ +YM  GSL  ++   +G  +L   + I     +A G+ Y+     K  +H
Sbjct: 72  KEE-PIYIITEYMAKGSLLDFLKSDEGGKVL-LPKLIDFSAQIAEGMAYIER---KNYIH 126

Query: 492 RDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTD 551
           RD++++NVL+ + +  ++ DFGLAR+    +  +       + + APE  + G  + ++D
Sbjct: 127 RDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSD 186

Query: 552 VFGFGILILEVLS-GRRP 568
           V+ FGIL+ E+++ G+ P
Sbjct: 187 VWSFGILLYEIVTYGKIP 204

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lyn is expressed in B lymphocytes and myeloid cells. It exhibits both positive and negative regulatory roles in B cell receptor (BCR) signaling. Lyn, as well as Fyn and Blk, promotes B cell activation by phosphorylating ITAMs (immunoreceptor tyr activation motifs) in CD19 and in Ig components of BCR. It negatively regulates signaling by its unique ability to phosphorylate ITIMs (immunoreceptor tyr inhibition motifs) in cell surface receptors like CD22 and CD5. Lyn also plays an important role in G-CSF receptor signaling by phosphorylating a variety of adaptor molecules. Length = 261

>gnl|CDD|173759 cd08219, STKc_Nek3, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3

 Score = 76.2 bits (187), Expect = 2e-15
 Identities = 48/159 (30%), Positives = 84/159 (52%), Gaps = 8/159 (5%)

Query: 415 LGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERI-RVLKD 473
           L ++KH ++V  +   + + G L +V +Y + G L + I    G   L  E+ I +    
Sbjct: 52  LAKMKHPNIVAFKESFEAD-GHLYIVMEYCDGGDLMQKIKLQRGK--LFPEDTILQWFVQ 108

Query: 474 VAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRVVGTV 533
           +  GV ++HE   K+VLHRDIKS N+ L +    +LGDFG AR+      A     VGT 
Sbjct: 109 MCLGVQHIHE---KRVLHRDIKSKNIFLTQNGKVKLGDFGSARLLTS-PGAYACTYVGTP 164

Query: 534 GYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEG 572
            Y+ PE++ +   + ++D++  G ++ E+ + + P +  
Sbjct: 165 YYVPPEIWENMPYNNKSDIWSLGCILYELCTLKHPFQAN 203

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activation of Vav2 and contributes to prolactin-mediated motility of breast cancer cells. Length = 255

>gnl|CDD|173719 cd05630, STKc_GRK6, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

 Score = 77.0 bits (189), Expect = 2e-15
 Identities = 60/211 (28%), Positives = 99/211 (46%), Gaps = 10/211 (4%)

Query: 366 FSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHE---NDGGTRAFLAEISSLGRLKHKS 422
           F +  V+G GG G+V    +   G   A K++  +      G    L E   L ++  + 
Sbjct: 2   FRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRF 61

Query: 423 LVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLH 482
           +V L  +    K +L LV   M  G L   I+   G         +    ++  G+  LH
Sbjct: 62  VVSL-AYAYETKDALCLVLTLMNGGDLKFHIYHM-GEAGFEEGRAVFYAAEICCGLEDLH 119

Query: 483 EGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFS 542
           +   +++++RD+K  N+LLD   + R+ D GLA     GQ       VGTVGY+APEV  
Sbjct: 120 Q---ERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGR--VGTVGYMAPEVVK 174

Query: 543 SGRASTQTDVFGFGILILEVLSGRRPIEEGK 573
           + R +   D +  G L+ E+++G+ P ++ K
Sbjct: 175 NERYTFSPDWWALGCLLYEMIAGQSPFQQRK 205

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as multiple splice variants with different domain architectures. It is post-translationally palmitoylated and localized in the membrane. GRK6 plays important roles in the regulation of dopamine, M3 muscarinic, opioid, and chemokine receptor signaling. It also plays maladaptive roles in addiction and Parkinson's disease. GRK6-deficient mice exhibit altered dopamine receptor regulation, decreased lymphocyte chemotaxis, and increased acute inflammation and neutrophil chemotaxis. Length = 285

>gnl|CDD|133167 cd05035, PTKc_Axl_like, Catalytic Domain of Axl-like Protein Tyrosine Kinases

 Score = 76.4 bits (188), Expect = 3e-15
 Identities = 66/282 (23%), Positives = 131/282 (46%), Gaps = 32/282 (11%)

Query: 371 VIGVGGNGKVYKGVL---EGGGAEIAVKRISHENDGGT--RAFLAEISSLGRLKHKSLVG 425
           ++G G  G V +G L   +G   ++AVK +  +    +    FL+E + +    H +++ 
Sbjct: 6   ILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMK 65

Query: 426 LRGWC--KREKGSL---MLVYDYMENGSLDKWIFQC---DGSMMLSCEERIRVLKDVAAG 477
           L G C        +   M++  +M++G L  ++           L  +  ++ + D+A G
Sbjct: 66  LIGVCFEASSLQKIPKPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALG 125

Query: 478 VLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRVVGT-VGYL 536
           + YL     +  +HRD+ + N +L ++M   + DFGL++    G      R+    V ++
Sbjct: 126 MEYLSN---RNFIHRDLAARNCMLREDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWI 182

Query: 537 APEVFSSGRASTQTDVFGFGILILEVLS-GRRPIEEGKPNLVEMVWELMVQGKLLDALDA 595
           A E  +    ++++DV+ FG+ + E+ + G+ P   G  N    +++ +  G        
Sbjct: 183 AIESLADRVYTSKSDVWAFGVTMWEIATRGQTPY-PGVEN--HEIYDYLRHGN------- 232

Query: 596 RLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLE 637
           RL+      ED ++ +  L   C   DP+ RPT  ++ +VLE
Sbjct: 233 RLKQP----EDCLDELYDLMYSCWRADPKDRPTFTKLREVLE 270

Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellular effects including survival, proliferation, migration, and phagocytosis. They are also associated with several types of cancer as well as inflammatory, autoimmune, vascular, and kidney diseases. Mer is named after its original reported expression pattern (monocytes, epithelial, and reproductive tissues). It is required for the ingestion of apoptotic cells by phagocytes such as macrophages, retinal pigment epithelial cells, and dendritic cells. Mer is also important in maintaining immune homeostasis. Length = 273

>gnl|CDD|133219 cd05088, PTKc_Tie2, Catalytic domain of the Protein Tyrosine Kinase, Tie2

 Score = 77.0 bits (189), Expect = 3e-15
 Identities = 75/293 (25%), Positives = 137/293 (46%), Gaps = 42/293 (14%)

Query: 369 ENVIGVGGNGKVYKGVLEGGGAEI--AVKRIS-HENDGGTRAFLAEISSLGRL-KHKSLV 424
           ++VIG G  G+V K  ++  G  +  A+KR+  + +    R F  E+  L +L  H +++
Sbjct: 12  QDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNII 71

Query: 425 GLRGWCKREKGSLMLVYDYMENGSLDKW-----IFQCDGSM--------MLSCEERIRVL 471
            L G C+  +G L L  +Y  +G+L  +     + + D +          LS ++ +   
Sbjct: 72  NLLGACE-HRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFA 130

Query: 472 KDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRVVG 531
            DVA G+ YL +   K+ +HRD+ + N+L+ +    ++ DFGL+R    GQ     + +G
Sbjct: 131 ADVARGMDYLSQ---KQFIHRDLAARNILVGENYVAKIADFGLSR----GQEVYVKKTMG 183

Query: 532 --TVGYLAPEVFSSGRASTQTDVFGFGILILEVLS-GRRPIEEGKPNLVEMVWELMVQGK 588
              V ++A E  +    +T +DV+ +G+L+ E++S G  P            +  M   +
Sbjct: 184 RLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTP------------YCGMTCAE 231

Query: 589 LLDALDARLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLEGKIE 641
           L + L    R +   + D  + V  L   C    P  RP+  Q++  L   +E
Sbjct: 232 LYEKLPQGYRLEKPLNCD--DEVYDLMRQCWREKPYERPSFAQILVSLNRMLE 282

Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of Ang-1 to Tie2 leads to receptor autophosphorylation and activation, promoting cell migration and survival. In contrast, Ang-2 binding to Tie2 does not result in the same response, suggesting that Ang-2 may function as an antagonist. Tie2 signaling plays key regulatory roles in vascular integrity and quiescence, and in inflammation. Length = 303

>gnl|CDD|173672 cd05581, STKc_PDK1, Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

 Score = 75.7 bits (187), Expect = 6e-15
 Identities = 57/234 (24%), Positives = 101/234 (43%), Gaps = 46/234 (19%)

Query: 366 FSEENVIGVGGNGKVYKGVLEGGGAEIAVK-----RISHENDGGTRAFLAEISSLGRLK- 419
           F    +IG G    V     +    E A+K     ++  E     +    E   L RL  
Sbjct: 3   FKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKK--VKYVKIEKEVLTRLNG 60

Query: 420 HKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWI--FQCDGSMMLSCEERIRVLKDVAAG 477
           H  ++ L  +  +++ +L  V +Y  NG L ++I  +       L      +  +  AA 
Sbjct: 61  HPGIIKLY-YTFQDEENLYFVLEYAPNGELLQYIRKYGS-----LD----EKCTRFYAAE 110

Query: 478 VL----YLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRV---- 529
           +L    YLH    K ++HRD+K  N+LLDK+M+ ++ DFG A++        + +     
Sbjct: 111 ILLALEYLHS---KGIIHRDLKPENILLDKDMHIKITDFGTAKVLDPNSSPESNKGDATN 167

Query: 530 ---------------VGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRP 568
                          VGT  Y++PE+ +   A   +D++  G +I ++L+G+ P
Sbjct: 168 IDSQIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPP 221

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to autophosphorylate and is constitutively active in mammalian cells. PDK1 is essential for normal embryo development and is important in regulating cell volume. Length = 280

>gnl|CDD|173663 cd05572, STKc_cGK_PKG, Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

 Score = 75.0 bits (185), Expect = 6e-15
 Identities = 56/210 (26%), Positives = 93/210 (44%), Gaps = 32/210 (15%)

Query: 372 IGVGGNGKVYKGVLEGGGAEIAVKRIS--HENDGGTRAFL-AEISSLGRLKHKSLVGLRG 428
           +GVGG G+V    ++      A+K +   H  + G +  + +E   L    H  +V L  
Sbjct: 1   LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYR 60

Query: 429 WCKREKGSLML--------VYDYM-ENGSLDKWIFQ-CDGSMMLSCEERIRVLKDVAAGV 478
             K +K   ML        ++  + + G  D++  +     ++L+ E             
Sbjct: 61  TFKDKKYIYMLMEYCLGGELWTILRDRGLFDEYTARFYIACVVLAFE------------- 107

Query: 479 LYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAP 538
            YLH    + +++RD+K  N+LLD     +L DFG A+    GQ   T    GT  Y+AP
Sbjct: 108 -YLHN---RGIIYRDLKPENLLLDSNGYVKLVDFGFAKKLKSGQKTWT--FCGTPEYVAP 161

Query: 539 EVFSSGRASTQTDVFGFGILILEVLSGRRP 568
           E+  +       D +  GIL+ E+L+GR P
Sbjct: 162 EIILNKGYDFSVDYWSLGILLYELLTGRPP 191

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowing autophosphorylation and activation of the kinase. cGKI is a soluble protein expressed in all smooth muscles, platelets, cerebellum, and kidney. It is also expressed at lower concentrations in other tissues. cGKII is a membrane-bound protein that is most abundantly expressed in the intestine. It is also present in the brain nuclei, adrenal cortex, kidney, lung, and prostate. cGKI is involved in the regulation of smooth muscle tone, smooth cell proliferation, and platelet activation. cGKII plays a role in the regulation of secretion, such as renin secretion by the kidney and aldosterone secretion by the adrenal. It also regulates bone growth and the circadian rhythm. Length = 262

>gnl|CDD|88330 cd05047, PTKc_Tie, Catalytic domain of Tie Protein Tyrosine Kinases

 Score = 75.1 bits (184), Expect = 6e-15
 Identities = 58/216 (26%), Positives = 109/216 (50%), Gaps = 31/216 (14%)

Query: 370 NVIGVGGNGKVYKGVLEGGGAEI-----AVKRISHENDGGTRAFLAEISSLGRL-KHKSL 423
           +VIG G  G+V K  ++  G  +      +K  + ++D   R F  E+  L +L  H ++
Sbjct: 1   DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDD--HRDFAGELEVLCKLGHHPNI 58

Query: 424 VGLRGWCKREKGSLMLVYDYMENGSLDKW-----IFQCDGSM--------MLSCEERIRV 470
           + L G C+  +G L L  +Y  +G+L  +     + + D +          LS ++ +  
Sbjct: 59  INLLGACE-HRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHF 117

Query: 471 LKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRVV 530
             DVA G+ YL +   K+ +HRD+ + N+L+ +    ++ DFGL+R    GQ     + +
Sbjct: 118 AADVARGMDYLSQ---KQFIHRDLAARNILVGENYVAKIADFGLSR----GQEVYVKKTM 170

Query: 531 G--TVGYLAPEVFSSGRASTQTDVFGFGILILEVLS 564
           G   V ++A E  +    +T +DV+ +G+L+ E++S
Sbjct: 171 GRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 206

Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific ligand has been identified for Tie1. The binding of Ang-1 to Tie2 leads to receptor autophosphorylation and activation, promoting cell migration and survival. In contrast, Ang-2 binding to Tie2 does not result in the same response, suggesting that Ang-2 may function as an antagonist. In vivo studies of Tie1 show that it is critical in vascular development. Length = 270

>gnl|CDD|173732 cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

 Score = 74.9 bits (184), Expect = 7e-15
 Identities = 57/225 (25%), Positives = 113/225 (50%), Gaps = 29/225 (12%)

Query: 371 VIGVGGNGKVYKGVLEGGGAEIAVKR-----ISHENDGGTRAFLA----EISSLGRLKHK 421
           +IG G  G VY G+    G  +AVK+     +S  +    R+ L     EI+ L  L+H+
Sbjct: 7   LIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHE 66

Query: 422 SLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERI--RVLKDVAAGVL 479
           ++V   G    +   L +  +Y+  GS+   +     +   + EE +    ++ +  G+ 
Sbjct: 67  NIVQYLG-SSLDADHLNIFLEYVPGGSVAALL-----NNYGAFEETLVRNFVRQILKGLN 120

Query: 480 YLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTR-----VVGTVG 534
           YLH    + ++HRDIK +N+L+D +   ++ DFG+++      +++ T      + G+V 
Sbjct: 121 YLHN---RGIIHRDIKGANILVDNKGGIKISDFGISKKLEANSLSTKTNGARPSLQGSVF 177

Query: 535 YLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEM 579
           ++APEV      + + D++  G L++E+L+G+ P     P+  ++
Sbjct: 178 WMAPEVVKQTSYTRKADIWSLGCLVVEMLTGKHPF----PDCTQL 218

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Byr2 is regulated by Ras1. It responds to pheromone signaling and controls mating through the MAPK pathway. Budding yeast Ste11 functions in MAPK cascades that regulate mating, high osmolarity glycerol, and filamentous growth responses. Length = 267

>gnl|CDD|133216 cd05085, PTKc_Fer, Catalytic domain of the Protein Tyrosine Kinase, Fer

 Score = 74.6 bits (183), Expect = 7e-15
 Identities = 55/195 (28%), Positives = 98/195 (50%), Gaps = 8/195 (4%)

Query: 371 VIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTR-AFLAEISSLGRLKHKSLVGLRGW 429
           ++G G  G+V+KG L+     +AVK    +     +  FL+E   L +  H ++V L G 
Sbjct: 2   LLGKGNFGEVFKGTLKDK-TPVAVKTCKEDLPQELKIKFLSEARILKQYDHPNIVKLIGV 60

Query: 430 CKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKV 489
           C  ++  + +V + +  G  D   F       L  ++ ++   D AAG+ YL     K  
Sbjct: 61  CT-QRQPIYIVMELVPGG--DFLSFLRKKKDELKTKQLVKFALDAAAGMAYLES---KNC 114

Query: 490 LHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQ 549
           +HRD+ + N L+ +    ++ DFG++R    G  +S+      + + APE  + GR S++
Sbjct: 115 IHRDLAARNCLVGENNVLKISDFGMSRQEDDGIYSSSGLKQIPIKWTAPEALNYGRYSSE 174

Query: 550 TDVFGFGILILEVLS 564
           +DV+ +GIL+ E  S
Sbjct: 175 SDVWSYGILLWETFS 189

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-cell interactions mediated by adherens junctions and focal adhesions. Fer kinase also regulates cell cycle progression in malignant cells. Length = 250

>gnl|CDD|173661 cd05570, STKc_PKC, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

 Score = 75.5 bits (186), Expect = 8e-15
 Identities = 63/206 (30%), Positives = 98/206 (47%), Gaps = 16/206 (7%)

Query: 371 VIGVGGNGKVYKGVLEGGGAEIAVKRISHE---NDGGTRAFLAE--ISSLGRLKHKSLVG 425
           V+G G  GKV    L+G     AVK +  +    D      + E  + +L   KH  L  
Sbjct: 2   VLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAG-KHPFLTQ 60

Query: 426 LRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLK-DVAAGVLYLHEG 484
           L   C + K  L  V +Y+  G L   +F    S     E R R    ++  G+ +LHE 
Sbjct: 61  LHS-CFQTKDRLFFVMEYVNGGDL---MFHIQRSGRFD-EPRARFYAAEIVLGLQFLHE- 114

Query: 485 WEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSG 544
             + +++RD+K  NVLLD E + ++ DFG+ +  G     +T+   GT  Y+APE+ S  
Sbjct: 115 --RGIIYRDLKLDNVLLDSEGHIKIADFGMCK-EGILGGVTTSTFCGTPDYIAPEILSYQ 171

Query: 545 RASTQTDVFGFGILILEVLSGRRPIE 570
                 D +  G+L+ E+L+G+ P E
Sbjct: 172 PYGPAVDWWALGVLLYEMLAGQSPFE 197

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only require PS. PKCs phosphorylate and modify the activities of a wide variety of cellular proteins including receptors, enzymes, cytoskeletal proteins, transcription factors, and other kinases. They play a central role in signal transduction pathways that regulate cell migration and polarity, proliferation, differentiation, and apoptosis. Also included in this subfamily are the PKC-like proteins, called PKNs. Length = 318

>gnl|CDD|143375 cd07870, STKc_PFTAIRE2, Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase

 Score = 75.0 bits (184), Expect = 1e-14
 Identities = 65/219 (29%), Positives = 109/219 (49%), Gaps = 16/219 (7%)

Query: 372 IGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLA--EISSLGRLKHKSLVGLRGW 429
           +G G    VYKG+    G  +A+K IS + + G   F A  E S L  LKH ++V L   
Sbjct: 13  LGEGSYATVYKGISRINGQLVALKVISMKTEEGV-PFTAIREASLLKGLKHANIVLLHDI 71

Query: 430 CKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKV 489
               K +L  V++YM    L +++ Q  G +      R+ + + +  G+ Y+H    + +
Sbjct: 72  I-HTKETLTFVFEYMHT-DLAQYMIQHPGGLH-PYNVRLFMFQ-LLRGLAYIHG---QHI 124

Query: 490 LHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVF-SSGRAST 548
           LHRD+K  N+L+      +L DFGLAR         ++ VV T+ Y  P+V   +   S+
Sbjct: 125 LHRDLKPQNLLISYLGELKLADFGLARAKSIPSQTYSSEVV-TLWYRPPDVLLGATDYSS 183

Query: 549 QTDVFGFGILILEVLSGRRPIEEGKPNLVEM---VWELM 584
             D++G G + +E+L G +P   G  ++ E    +W ++
Sbjct: 184 ALDIWGAGCIFIEMLQG-QPAFPGVSDVFEQLEKIWTVL 221

Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recessive form of juvenile ALS. The function of PFTAIRE-2 is not yet known. Length = 291

>gnl|CDD|133230 cd05099, PTKc_FGFR4, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4

 Score = 75.4 bits (185), Expect = 1e-14
 Identities = 77/282 (27%), Positives = 135/282 (47%), Gaps = 42/282 (14%)

Query: 390 AEIAVKRISHENDGGTRAFLAEISSLGRL-----KHKSLVGLRGWCKREKGSLMLVYDYM 444
             +AVK +    D  T   LA++ S   L     KHK+++ L G C +E G L ++ +Y 
Sbjct: 45  VTVAVKML---KDNATDKDLADLISEMELMKLIGKHKNIINLLGVCTQE-GPLYVIVEYA 100

Query: 445 ENGSLDKWI---------FQCDGSMM----LSCEERIRVLKDVAAGVLYLHEGWEKKVLH 491
             G+L +++         +  D + +    LS ++ +     VA G+ YL     ++ +H
Sbjct: 101 AKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLES---RRCIH 157

Query: 492 RDIKSSNVLLDKEMNGRLGDFGLAR-MHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQT 550
           RD+ + NVL+ ++   ++ DFGLAR +H       T+     V ++APE       + Q+
Sbjct: 158 RDLAARNVLVTEDNVMKIADFGLARGVHDIDYYKKTSNGRLPVKWMAPEALFDRVYTHQS 217

Query: 551 DVFGFGILILEVLS-GRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRAKGGFDEDEVE 609
           DV+ FGIL+ E+ + G  P   G P  VE +++L+ +G  +D              +   
Sbjct: 218 DVWSFGILMWEIFTLGGSPY-PGIP--VEELFKLLREGHRMDK-----------PSNCTH 263

Query: 610 RVLHLGLLCAYPDPRARPTMRQVVKVLEGKIEAGIENETEDM 651
            +  L   C +  P  RPT +Q+V+ L+ K+ A +  E  D+
Sbjct: 264 ELYMLMRECWHAVPTQRPTFKQLVEALD-KVLAAVSEEYLDL 304

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Unlike other FGFRs, there is only one splice form of FGFR4. It binds FGF1, FGF2, FGF6, FGF19, and FGF23. FGF19 is a selective ligand for FGFR4. Although disruption of FGFR4 in mice causes no obvious phenotype, in vivo inhibition of FGFR4 in cultured skeletal muscle cells resulted in an arrest of muscle progenitor differentiation. FGF6 and FGFR4 are uniquely expressed in myofibers and satellite cells. FGF6/FGFR4 signaling appears to play a key role in the regulation of muscle regeneration. A polymorphism in FGFR4 is found in head and neck squamous cell carcinoma. Length = 314

>gnl|CDD|173652 cd05100, PTKc_FGFR3, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3

 Score = 75.4 bits (185), Expect = 1e-14
 Identities = 71/266 (26%), Positives = 129/266 (48%), Gaps = 41/266 (15%)

Query: 392 IAVKRISHENDGGTRAFLAEISSLGRL-----KHKSLVGLRGWCKREKGSLMLVYDYMEN 446
           +AVK +    D  T   L+++ S   +     KHK+++ L G C ++ G L ++ +Y   
Sbjct: 47  VAVKML---KDDATDKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD-GPLYVLVEYASK 102

Query: 447 GSLDKWI---------FQCDGSMM----LSCEERIRVLKDVAAGVLYLHEGWEKKVLHRD 493
           G+L +++         +  D   +    L+ ++ +     VA G+ YL     +K +HRD
Sbjct: 103 GNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLAS---QKCIHRD 159

Query: 494 IKSSNVLLDKEMNGRLGDFGLAR-MHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDV 552
           + + NVL+ ++   ++ DFGLAR +H       TT     V ++APE       + Q+DV
Sbjct: 160 LAARNVLVTEDNVMKIADFGLARDVHNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDV 219

Query: 553 FGFGILILEVLS-GRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRAKGGFDEDEVERV 611
           + FG+L+ E+ + G  P   G P  VE +++L+ +G  +D        K      E+  +
Sbjct: 220 WSFGVLLWEIFTLGGSPY-PGIP--VEELFKLLKEGHRMD--------KPANCTHELYMI 268

Query: 612 LHLGLLCAYPDPRARPTMRQVVKVLE 637
           +     C +  P  RPT +Q+V+ L+
Sbjct: 269 MR---ECWHAVPSQRPTFKQLVEDLD 291

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Many FGFR3 splice variants have been reported with the IIIb and IIIc isoforms being the predominant forms. FGFR3 IIIc is the isoform expressed in chondrocytes, the cells affected in dwarfism, while IIIb is expressed in epithelial cells. FGFR3 ligands include FGF1, FGF2, FGF4, FGF8, FGF9, and FGF23. It is a negative regulator of long bone growth. In the cochlear duct and in the lens, FGFR3 is involved in differentiation while it appears to have a role in cell proliferation in epithelial cells. Germline mutations in FGFR3 are associated with skeletal disorders including several forms of dwarfism. Some missense mutations are associated with multiple myeloma and carcinomas of the bladder and cervix. Overexpression of FGFR3 is found in thyroid carcinoma. Length = 334

>gnl|CDD|132987 cd06656, STKc_PAK3, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

 Score = 74.8 bits (183), Expect = 2e-14
 Identities = 58/215 (26%), Positives = 104/215 (48%), Gaps = 17/215 (7%)

Query: 364 KGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSL 423
           K ++    IG G +G VY  +    G E+A+K+++ +        + EI  +   K+ ++
Sbjct: 19  KKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQPKKELIINEILVMRENKNPNI 78

Query: 424 VG-LRGWCKREKGSLMLVYDYMENGSLDKWIFQC---DGSMMLSCEERIRVLKDVAAGVL 479
           V  L  +   ++  L +V +Y+  GSL   + +    +G +   C E ++ L        
Sbjct: 79  VNYLDSYLVGDE--LWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALD------- 129

Query: 480 YLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPE 539
           +LH     +V+HRDIKS N+LL  + + +L DFG        Q   +T +VGT  ++APE
Sbjct: 130 FLHS---NQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRST-MVGTPYWMAPE 185

Query: 540 VFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKP 574
           V +      + D++  GI+ +E++ G  P     P
Sbjct: 186 VVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENP 220

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK3 is highly expressed in the brain. It is implicated in neuronal plasticity, synapse formation, dendritic spine morphogenesis, cell cycle progression, neuronal migration, and apoptosis. Inactivating mutations in the PAK3 gene cause X-linked non-syndromic mental retardation, the severity of which depends on the site of the mutation. Length = 297

>gnl|CDD|132991 cd06917, STKc_NAK1_like, Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

 Score = 74.0 bits (182), Expect = 2e-14
 Identities = 55/210 (26%), Positives = 100/210 (47%), Gaps = 28/210 (13%)

Query: 371 VIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLA-EISSLGRLKH---KSLVGL 426
           +IG G  G VY+G     G  +A+K I+ +      + +  E++ L +L+     ++   
Sbjct: 8   LIGRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDVSDIQREVALLSQLRQSQPPNITKY 67

Query: 427 RGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSC-EERIR--VLKDVAAGVLYLHE 483
            G    +   L ++ +Y E GS+          M      E+    ++++V   + Y+H+
Sbjct: 68  YG-SYLKGPRLWIIMEYAEGGSVRTL-------MKAGPIAEKYISVIIREVLVALKYIHK 119

Query: 484 GWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTR----VVGTVGYLAPE 539
                V+HRDIK++N+L+    N +L DFG+A       +   +      VGT  ++APE
Sbjct: 120 ---VGVIHRDIKAANILVTNTGNVKLCDFGVA-----ALLNQNSSKRSTFVGTPYWMAPE 171

Query: 540 VFSSGRA-STQTDVFGFGILILEVLSGRRP 568
           V + G+   T+ D++  GI I E+ +G  P
Sbjct: 172 VITEGKYYDTKADIWSLGITIYEMATGNPP 201

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of centrin, and phosphorylates substrates in a Cdc31p-dependent manner. Length = 277

>gnl|CDD|132950 cd06619, PKc_MKK5, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

 Score = 73.8 bits (181), Expect = 2e-14
 Identities = 64/218 (29%), Positives = 98/218 (44%), Gaps = 27/218 (12%)

Query: 352 HRITYQEIEAATKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHE-NDGGTRAFLA 410
             I YQEI            +G G  G VYK         +AVK I  +      +  ++
Sbjct: 1   QDIQYQEI------------LGHGNGGTVYKAYHLLTRRILAVKVIPLDITVELQKQIMS 48

Query: 411 EISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRV 470
           E+  L +     ++G  G    E   + +  ++M+ GSLD +       +      RI V
Sbjct: 49  ELEILYKCDSPYIIGFYGAFFVEN-RISICTEFMDGGSLDVY-----RKIPEHVLGRIAV 102

Query: 471 LKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRVV 530
              V  G+ YL   W  K+LHRD+K SN+L++     +L DFG++    +  +A T   V
Sbjct: 103 A--VVKGLTYL---WSLKILHRDVKPSNMLVNTRGQVKLCDFGVSTQLVN-SIAKT--YV 154

Query: 531 GTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRP 568
           GT  Y+APE  S  +    +DV+  GI  +E+  GR P
Sbjct: 155 GTNAYMAPERISGEQYGIHSDVWSLGISFMELALGRFP 192

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that phosphorylates its downstream target, extracellular signal-regulated kinase 5 (ERK5), on specific threonine and tyrosine residues. MKK5 is activated by MEKK2 and MEKK3 in response to mitogenic and stress stimuli. The ERK5 cascade promotes cell proliferation, differentiation, neuronal survival, and neuroprotection. This cascade plays an essential role in heart development. Mice deficient in either ERK5 or MKK5 die around embryonic day 10 due to cardiovascular defects including underdevelopment of the myocardium. In addition, MKK5 is associated with metastasis and unfavorable prognosis in prostate cancer. Length = 279

>gnl|CDD|132985 cd06654, STKc_PAK1, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

 Score = 74.0 bits (181), Expect = 2e-14
 Identities = 56/215 (26%), Positives = 105/215 (48%), Gaps = 17/215 (7%)

Query: 364 KGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSL 423
           K ++    IG G +G VY  +    G E+A+++++ +        + EI  +   K+ ++
Sbjct: 20  KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNI 79

Query: 424 VG-LRGWCKREKGSLMLVYDYMENGSLDKWIFQC---DGSMMLSCEERIRVLKDVAAGVL 479
           V  L  +   ++  L +V +Y+  GSL   + +    +G +   C E ++ L+       
Sbjct: 80  VNYLDSYLVGDE--LWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALE------- 130

Query: 480 YLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPE 539
           +LH     +V+HRDIKS N+LL  + + +L DFG        Q +  + +VGT  ++APE
Sbjct: 131 FLHS---NQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ-SKRSTMVGTPYWMAPE 186

Query: 540 VFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKP 574
           V +      + D++  GI+ +E++ G  P     P
Sbjct: 187 VVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENP 221

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK1 is important in the regulation of many cellular processes including cytoskeletal dynamics, cell motility, growth, and proliferation. Although PAK1 has been regarded mainly as a cytosolic protein, recent reports indicate that PAK1 also exists in significant amounts in the nucleus, where it is involved in transcription modulation and in cell cycle regulatory events. PAK1 is also involved in transformation and tumorigenesis. Its overexpression, hyperactivation and increased nuclear accumulation is correlated to breast cancer invasiveness and progression. Nuclear accumulation is also linked to tamoxifen resistance in breast cancer cells. Length = 296

>gnl|CDD|133246 cd05115, PTKc_Zap-70, Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa

 Score = 73.1 bits (179), Expect = 3e-14
 Identities = 63/238 (26%), Positives = 111/238 (46%), Gaps = 30/238 (12%)

Query: 372 IGVGGNGKVYKGV--LEGGGAEIAVKRISHENDGGTR-AFLAEISSLGRLKHKSLVGLRG 428
           +G G  G V KGV  +     ++A+K + +EN+   R   + E   + +L +  +V + G
Sbjct: 3   LGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENEKSVRDEMMREAEIMHQLDNPYIVRMIG 62

Query: 429 WCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKK 488
            C+ E  +LMLV +    G L+K  F       ++    + ++  V+ G+ YL     K 
Sbjct: 63  VCEAE--ALMLVMEMASGGPLNK--FLSGKKDEITVSNVVELMHQVSMGMKYLEG---KN 115

Query: 489 VLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRVVGT--VGYLAPEVFSSGRA 546
            +HRD+ + NVLL  +   ++ DFGL++  G        R  G   + + APE  +  + 
Sbjct: 116 FVHRDLAARNVLLVNQHYAKISDFGLSKALGADDSYYKARSAGKWPLKWYAPECINFRKF 175

Query: 547 STQTDVFGFGILILEVLS-GRRP------------IEEGK-----PNLVEMVWELMVQ 586
           S+++DV+ +GI + E  S G++P            IE+GK           ++ LM  
Sbjct: 176 SSRSDVWSYGITMWEAFSYGQKPYKKMKGPEVMSFIEQGKRLDCPAECPPEMYALMKD 233

Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its phosphorylation and activation. It then phosphorylates target proteins, which propagate the signals to downstream pathways. Zap-70 is hardly detected in normal peripheral B-cells, but is present in some B-cell malignancies. It is used as a diagnostic marker for chronic lymphocytic leukemia (CLL) as it is associated with the more aggressive subtype of the disease. Length = 257

>gnl|CDD|173720 cd05631, STKc_GRK4, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4

 Score = 73.5 bits (180), Expect = 3e-14
 Identities = 62/212 (29%), Positives = 100/212 (47%), Gaps = 12/212 (5%)

Query: 366 FSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHE---NDGGTRAFLAEISSLGRLKHKS 422
           F    V+G GG G+V    +   G   A K++  +      G    L E   L ++  + 
Sbjct: 2   FRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRF 61

Query: 423 LVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLH 482
           +V L  +    K +L LV   M  G L   I+   G+     +  I    ++  G+  L 
Sbjct: 62  VVSL-AYAYETKDALCLVLTIMNGGDLKFHIYNM-GNPGFDEQRAIFYAAELCCGLEDLQ 119

Query: 483 EGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTR-VVGTVGYLAPEVF 541
               +++++RD+K  N+LLD   + R+ D GLA     G+   T R  VGTVGY+APEV 
Sbjct: 120 R---ERIVYRDLKPENILLDDRGHIRISDLGLAVQIPEGE---TVRGRVGTVGYMAPEVI 173

Query: 542 SSGRASTQTDVFGFGILILEVLSGRRPIEEGK 573
           ++ + +   D +G G LI E++ G+ P  + K
Sbjct: 174 NNEKYTFSPDWWGLGCLIYEMIQGQSPFRKRK 205

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found in the testis, but is also present in the cerebellum and kidney. It is expressed as multiple splice variants with different domain architectures. It is post-translationally palmitoylated and localized in the membrane. GRK4 polymorphisms are associated with hypertension and salt sensitivity, as they cause hyperphosphorylation, desensitization, and internalization of the dopamine 1 (D1) receptor while increasing the expression of the angiotensin II type 1 receptor. GRK4 plays a crucial role in the D1 receptor regulation of sodium excretion and blood pressure. Length = 285

>gnl|CDD|133229 cd05098, PTKc_FGFR1, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1

 Score = 73.9 bits (181), Expect = 3e-14
 Identities = 65/234 (27%), Positives = 114/234 (48%), Gaps = 33/234 (14%)

Query: 419 KHKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIF-------------QCDGSMMLSCE 465
           KHK+++ L G C ++ G L ++ +Y   G+L +++                     LS +
Sbjct: 82  KHKNIINLLGACTQD-GPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFK 140

Query: 466 ERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLAR-MHGHGQVA 524
           + +     VA G+ YL     KK +HRD+ + NVL+ ++   ++ DFGLAR +H      
Sbjct: 141 DLVSCAYQVARGMEYLAS---KKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYK 197

Query: 525 STTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLS-GRRPIEEGKPNLVEMVWEL 583
            TT     V ++APE       + Q+DV+ FG+L+ E+ + G  P   G P  VE +++L
Sbjct: 198 KTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPY-PGVP--VEELFKL 254

Query: 584 MVQGKLLDALDARLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLE 637
           + +G  +D        K     +E+  ++     C +  P  RPT +Q+V+ L+
Sbjct: 255 LKEGHRMD--------KPSNCTNELYMMMR---DCWHAVPSQRPTFKQLVEDLD 297

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Alternative splicing of FGFR1 transcripts produces a variety of isoforms, which are differentially expressed in cells. FGFR1 binds the ligands, FGF1 and FGF2, with high affinity and has also been reported to bind FGF4, FGF6, and FGF9. FGFR1 signaling is critical in the control of cell migration during embryo development. It promotes cell proliferation in fibroblasts. Nuclear FGFR1 plays a role in the regulation of transcription. Mutations, insertions or deletions of FGFR1 have been identified in patients with Kallman's syndrome (KS), an inherited disorder characterized by hypogonadotropic hypogonadism and loss of olfaction. Aberrant FGFR1 expression has been found in some human cancers including 8P11 myeloproliferative syndrome (EMS), breast cancer, and pancreatic adenocarcinoma. Length = 307

>gnl|CDD|173744 cd07847, STKc_CDKL1_4, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

 Score = 73.6 bits (181), Expect = 3e-14
 Identities = 65/215 (30%), Positives = 101/215 (46%), Gaps = 26/215 (12%)

Query: 372 IGVGGNGKVYKGVLEGGGAEIAVKR-ISHENDGGTRAF-LAEISSLGRLKHKSLVGLRGW 429
           IG G  G V+K      G  +A+K+ +  E+D   +   L EI  L +LKH +LV L   
Sbjct: 9   IGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNLVNLIEV 68

Query: 430 CKREKGSLMLVYDYMEN---GSLDKWIFQCDGSMMLSCEERIR-VLKDVAAGVLYLHEGW 485
            +R K  L LV++Y ++     L+K             E  I+ ++      V + H+  
Sbjct: 69  FRR-KRKLHLVFEYCDHTVLNELEKNPRGVP-------EHLIKKIIWQTLQAVNFCHK-- 118

Query: 486 EKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGR 545
               +HRD+K  N+L+ K+   +L DFG AR+   G     T  V T  Y APE+     
Sbjct: 119 -HNCIHRDVKPENILITKQGQIKLCDFGFARIL-TGPGDDYTDYVATRWYRAPELLV--- 173

Query: 546 ASTQ----TDVFGFGILILEVLSGRRPIEEGKPNL 576
             TQ     DV+  G +  E+L+G +P+  GK ++
Sbjct: 174 GDTQYGPPVDVWAIGCVFAELLTG-QPLWPGKSDV 207

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The function of CDKL4 is unknown. Length = 286

>gnl|CDD|173631 cd05045, PTKc_RET, Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

 Score = 73.5 bits (180), Expect = 4e-14
 Identities = 78/296 (26%), Positives = 137/296 (46%), Gaps = 47/296 (15%)

Query: 371 VIGVGGNGKVYKGV---LEG--GGAEIAVKRI-SHENDGGTRAFLAEISSLGRLKHKSLV 424
            +G G  GKV K     L+G  G   +AVK +  + +    R  L+E + L ++ H  ++
Sbjct: 7   TLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQVNHPHVI 66

Query: 425 GLRGWCKREKGSLMLVYDYMENGSLDKWI----------FQCDGSMMLSC----EERIRV 470
            L G C ++ G L+L+ +Y + GSL  ++             DG+   S     +ER   
Sbjct: 67  KLYGACSQD-GPLLLIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALT 125

Query: 471 LKDV-------AAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLAR-MHGHGQ 522
           + D+       + G+ YL E    K++HRD+ + NVL+ +    ++ DFGL+R ++    
Sbjct: 126 MGDLISFAWQISRGMQYLAE---MKLVHRDLAARNVLVAEGRKMKISDFGLSRDVYEEDS 182

Query: 523 VASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLS-GRRPIEEGKPNLVEMVW 581
               ++    V ++A E       +TQ+DV+ FG+L+ E+++ G  P     P   E ++
Sbjct: 183 YVKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIAP---ERLF 239

Query: 582 ELMVQGKLLDALDARLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLE 637
            L+  G  ++             E+  E + +L L C   +P  RPT   + K LE
Sbjct: 240 NLLKTGYRMER-----------PENCSEEMYNLMLTCWKQEPDKRPTFADISKELE 284

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leading to autophosphorylation, activation, and intracellular signaling. RET is essential for the development of the sympathetic, parasympathetic and enteric nervous systems, and the kidney. RET disruption by germline mutations causes diseases in humans including congenital aganglionosis of the gastrointestinal tract (Hirschsprung's disease) and three related inherited cancers: multiple endocrine neoplasia type 2A (MEN2A), MEN2B, and familial medullary thyroid carcinoma (FMTC). Length = 290

>gnl|CDD|132973 cd06642, STKc_STK25-YSK1, Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

 Score = 72.8 bits (178), Expect = 4e-14
 Identities = 77/274 (28%), Positives = 127/274 (46%), Gaps = 32/274 (11%)

Query: 366 FSEENVIGVGGNGKVYKGVLEGGGAEIAVKRIS-HENDGGTRAFLAEISSLGRLKHKSLV 424
           F++   IG G  G+VYKG+       +A+K I   E +        EI+ L +     + 
Sbjct: 6   FTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYIT 65

Query: 425 GLRGWCKREKGS-LMLVYDYMENGS-LDKWIFQCDGSMMLSCEER--IRVLKDVAAGVLY 480
             R +    KG+ L ++ +Y+  GS LD       G +    EE     +L+++  G+ Y
Sbjct: 66  --RYYGSYLKGTKLWIIMEYLGGGSALD---LLKPGPL----EETYIATILREILKGLDY 116

Query: 481 LHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEV 540
           LH   E+K+ HRDIK++NVLL ++ + +L DFG+A      Q+   T  VGT  ++APEV
Sbjct: 117 LHS--ERKI-HRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNT-FVGTPFWMAPEV 172

Query: 541 FSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRAK 600
                   + D++  GI  +E+  G  P  +  P    M    ++       L+ +    
Sbjct: 173 IKQSAYDFKADIWSLGITAIELAKGEPPNSDLHP----MRVLFLIPKNSPPTLEGQYSKP 228

Query: 601 GGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVK 634
               ++ VE        C   DPR RPT ++++K
Sbjct: 229 F---KEFVEA-------CLNKDPRFRPTAKELLK 252

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25 is a candidate gene responsible for pseudopseudohypoparathyroidism (PPHP), a disease that shares features with the Albright hereditary osteodystrophy (AHO) phenotype. Length = 277

>gnl|CDD|133181 cd05050, PTKc_Musk, Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

 Score = 72.9 bits (179), Expect = 4e-14
 Identities = 60/224 (26%), Positives = 110/224 (49%), Gaps = 31/224 (13%)

Query: 372 IGVGGNGKVYK----GVLEGGGAEI-AVKRISHENDGGTRA-FLAEISSLGRLKHKSLVG 425
           IG G  G+V++    G+L      + AVK +  E     +A F  E + +    H ++V 
Sbjct: 13  IGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDHPNIVK 72

Query: 426 LRGWCKREKGSLMLVYDYMENGSLDKWIFQCD-------------------GSMMLSCEE 466
           L G C   K  + L+++YM  G L++++                         + LSC E
Sbjct: 73  LLGVCAVGK-PMCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTE 131

Query: 467 RIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLAR-MHGHGQVAS 525
           ++ + K VAAG+ YL E   +K +HRD+ + N L+ + M  ++ DFGL+R ++      +
Sbjct: 132 QLCIAKQVAAGMAYLSE---RKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKA 188

Query: 526 TTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLS-GRRP 568
           +      + ++ PE     R +T++DV+ +G+++ E+ S G +P
Sbjct: 189 SENDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGMQP 232

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates Musk autophosphorylation and activation, leading to the clustering of acetylcholine receptors (AChRs). To date, there is no evidence to suggest that agrin binds directly to Musk. Mutations in AChR, Musk and other partners are responsible for diseases of the NMJ, such as the autoimmune syndrome myasthenia gravis. Length = 288

>gnl|CDD|132981 cd06650, PKc_MEK1, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1

 Score = 73.5 bits (180), Expect = 4e-14
 Identities = 64/227 (28%), Positives = 112/227 (49%), Gaps = 18/227 (7%)

Query: 366 FSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTR-AFLAEISSLGRLKHKSLV 424
           F + + +G G  G V+K   +  G  +A K I  E     R   + E+  L       +V
Sbjct: 7   FEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIV 66

Query: 425 GLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERI--RVLKDVAAGVLYLH 482
           G  G    + G + +  ++M+ GSLD+ + +  G +     E+I  +V   V  G+ YL 
Sbjct: 67  GFYGAFYSD-GEISICMEHMDGGSLDQ-VLKKAGRI----PEQILGKVSIAVIKGLTYLR 120

Query: 483 EGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVAST--TRVVGTVGYLAPEV 540
           E  + K++HRD+K SN+L++     +L DFG++     GQ+  +     VGT  Y++PE 
Sbjct: 121 E--KHKIMHRDVKPSNILVNSRGEIKLCDFGVS-----GQLIDSMANSFVGTRSYMSPER 173

Query: 541 FSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQG 587
                 S Q+D++  G+ ++E+  GR PI       +E+++   V+G
Sbjct: 174 LQGTHYSVQSDIWSMGLSLVEMAIGRYPIPPPDAKELELMFGCPVEG 220

Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downstream targets, extracellular signal-regulated kinase (ERK) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK1, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK1, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. MEK1 also plays a role in cell cycle control. Length = 333

>gnl|CDD|132962 cd06631, STKc_YSK4, Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

 Score = 72.6 bits (178), Expect = 5e-14
 Identities = 64/222 (28%), Positives = 103/222 (46%), Gaps = 31/222 (13%)

Query: 363 TKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRIS-HENDGGT-----RAFLAEISSLG 416
           TKG     V+G G  G VY G L   G  IAVK++    ++             E+  L 
Sbjct: 3   TKG----EVLGKGAYGTVYCG-LTNQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLK 57

Query: 417 RLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSM--MLSCEERIRVLKDV 474
            LKH ++V   G C  +  ++ +  +++  GS+   I    G +   + C    +  K +
Sbjct: 58  SLKHVNIVQYLGTC-LDDNTISIFMEFVPGGSISS-ILNRFGPLPEPVFC----KYTKQI 111

Query: 475 AAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLAR------MHG-HGQVASTT 527
             GV YLH      V+HRDIK +NV+L      +L DFG AR      +HG H  +  + 
Sbjct: 112 LDGVAYLHN---NCVVHRDIKGNNVMLMPNGIIKLIDFGCARRLAWVGLHGTHSNMLKSM 168

Query: 528 RVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPI 569
              GT  ++APEV +      ++D++  G  + E+ +G+ P+
Sbjct: 169 H--GTPYWMAPEVINESGYGRKSDIWSIGCTVFEMATGKPPL 208

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Length = 265

>gnl|CDD|173696 cd05605, STKc_GRK4_like, Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

 Score = 72.9 bits (179), Expect = 5e-14
 Identities = 62/214 (28%), Positives = 99/214 (46%), Gaps = 16/214 (7%)

Query: 366 FSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHE---NDGGTRAFLAEISSLGRLKHKS 422
           F    V+G GG G+V    +   G   A K++  +      G    L E   L ++  + 
Sbjct: 2   FRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRF 61

Query: 423 LVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVL---KDVAAGVL 479
           +V L  +    K +L LV   M  G L   I+    +M     +  R +    ++  G+ 
Sbjct: 62  VVSL-AYAYETKDALCLVLTLMNGGDLKFHIY----NMGNPGFDEERAVFYAAEITCGLE 116

Query: 480 YLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPE 539
            LH    +++++RD+K  N+LLD   + R+ D GLA     G+       VGTVGY+APE
Sbjct: 117 DLHR---ERIVYRDLKPENILLDDYGHIRISDLGLAVEIPEGETIRGR--VGTVGYMAPE 171

Query: 540 VFSSGRASTQTDVFGFGILILEVLSGRRPIEEGK 573
           V  + R +   D +G G LI E++ G+ P  + K
Sbjct: 172 VVKNERYTFSPDWWGLGCLIYEMIEGKSPFRQRK 205

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5, GRK6, and similar GRKs. GRKs in this group contain an N-terminal RGS homology (RH) domain and a catalytic domain, but lack a G protein betagamma-subunit binding domain. They are localized to the plasma membrane through post-translational lipid modification or direct binding to PIP2. Length = 285

>gnl|CDD|173743 cd07846, STKc_CDKL2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

 Score = 72.8 bits (179), Expect = 5e-14
 Identities = 60/202 (29%), Positives = 101/202 (50%), Gaps = 19/202 (9%)

Query: 371 VIGVGGNGKVYKGVLEGGGAEIAVKRI--SHENDGGTRAFLAEISSLGRLKHKSLVGLRG 428
           ++G G  G V K   +  G  +A+K+   S ++    +  + EI  L +L+H++LV L  
Sbjct: 8   LVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLVNLIE 67

Query: 429 WCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKK 488
             +R+K  L LV++++++  LD      +G   L      + L  +  G+ + H      
Sbjct: 68  VFRRKK-RLYLVFEFVDHTVLDDLEKYPNG---LDESRVRKYLFQILRGIEFCHS---HN 120

Query: 489 VLHRDIKSSNVLLDKEMNGRLGDFGLAR-MHGHGQVASTTRVVGTVGYLAPEVF----SS 543
           ++HRDIK  N+L+ +    +L DFG AR +   G+V   T  V T  Y APE+       
Sbjct: 121 IIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEV--YTDYVATRWYRAPELLVGDTKY 178

Query: 544 GRASTQTDVFGFGILILEVLSG 565
           GRA    D++  G L+ E+L+G
Sbjct: 179 GRA---VDIWAVGCLVTEMLTG 197

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKIAMRE (NKIATRE in rat), by translocation is associated with mild mental retardation. It has been reported that CDKL3 is lost in leukemic cells having a chromosome arm 5q deletion, and may contribute to the transformed phenotype. Length = 286

>gnl|CDD|173741 cd07843, STKc_CDC2L1, Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

 Score = 72.6 bits (179), Expect = 6e-14
 Identities = 62/214 (28%), Positives = 109/214 (50%), Gaps = 24/214 (11%)

Query: 370 NVIGVGGNGKVYKGVLEGGGAEIAVKRISHEN--DGGTRAFLAEISSLGRLKHKSLVGLR 427
           N I  G  G VY+   +  G  +A+K++  E   +G     L EI+ L +L+H ++V ++
Sbjct: 11  NRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKLQHPNIVTVK 70

Query: 428 GWCKREKGSLM----LVYDYMEN---GSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLY 480
              +   GS +    +V +Y+E+     ++               E   ++  + +GV +
Sbjct: 71  ---EVVVGSNLDKIYMVMEYVEHDLKSLME------TMKQPFLQSEVKCLMLQLLSGVAH 121

Query: 481 LHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEV 540
           LH+ W   +LHRD+K+SN+LL+     ++ DFGLAR +G      T  VV T+ Y APE+
Sbjct: 122 LHDNW---ILHRDLKTSNLLLNNRGILKICDFGLAREYGSPLKPYTQLVV-TLWYRAPEL 177

Query: 541 -FSSGRASTQTDVFGFGILILEVLSGRRPIEEGK 573
              +   ST  D++  G +  E+L+ ++P+  GK
Sbjct: 178 LLGAKEYSTAIDMWSVGCIFAELLT-KKPLFPGK 210

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the major isoform, associates with cyclin L and is expressed throughout the cell cycle. It is involved in RNA processing and the regulation of transcription. CDK11(p58) associates with cyclin D3 and is expressed during the G2/M phase of the cell cycle. It plays roles in spindle morphogenesis, centrosome maturation, sister chromatid cohesion, and the completion of mitosis. CDK11(p46) is formed from the larger isoforms by caspases during TNFalpha- and Fas-induced apoptosis. It functions as a downstream effector kinase in apoptotic signaling pathways and interacts with eukaryotic initiation factor 3f (eIF3f), p21-activated kinase (PAK1), and Ran-binding protein (RanBPM). Length = 293

>gnl|CDD|132979 cd06648, STKc_PAK_II, Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

 Score = 71.3 bits (175), Expect = 1e-13
 Identities = 40/136 (29%), Positives = 69/136 (50%), Gaps = 16/136 (11%)

Query: 437 LMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKS 496
           L +V +++E G+L   +        ++ E+   V   V   + +LH    + V+HRDIKS
Sbjct: 91  LWVVMEFLEGGALTDIVTH----TRMNEEQIATVCLAVLKALSFLHA---QGVIHRDIKS 143

Query: 497 SNVLLDKEMNGRLGDFGLARMHGHGQVASTT----RVVGTVGYLAPEVFSSGRASTQTDV 552
            ++LL  +   +L DFG        QV+        +VGT  ++APEV S     T+ D+
Sbjct: 144 DSILLTSDGRVKLSDFGFC-----AQVSKEVPRRKSLVGTPYWMAPEVISRLPYGTEVDI 198

Query: 553 FGFGILILEVLSGRRP 568
           +  GI+++E++ G  P
Sbjct: 199 WSLGIMVIEMVDGEPP 214

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs found in group I PAKs, such as an AID (autoinhibitory domain) and SH3 binding sites. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. While group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX, no such binding has been demonstrated for group II PAKs. Some known substrates of group II PAKs are also substrates of group I PAKs such as Raf, BAD, LIMK and GEFH1. Unique group II substrates include MARK/Par-1 and PDZ-RhoGEF. Group II PAKs play important roles in filopodia formation, neuron extension, cytoskeletal organization, and cell survival. Length = 285

>gnl|CDD|132971 cd06640, STKc_MST4, Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

 Score = 71.2 bits (174), Expect = 1e-13
 Identities = 63/218 (28%), Positives = 102/218 (46%), Gaps = 26/218 (11%)

Query: 366 FSEENVIGVGGNGKVYKGVLEGGGAEIAVKRIS-HENDGGTRAFLAEISSLGRLKHKSLV 424
           F++   IG G  G+V+KG+       +A+K I   E +        EI+ L +     + 
Sbjct: 6   FTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 65

Query: 425 GLRG-WCKREKGSLMLVY-------DYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAA 476
              G + K  K  +++ Y       D +  G  D+  FQ              +LK++  
Sbjct: 66  KYYGSYLKGTKLWIIMEYLGGGSALDLLRAGPFDE--FQI-----------ATMLKEILK 112

Query: 477 GVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYL 536
           G+ YLH   EKK+ HRDIK++NVLL ++ + +L DFG+A      Q+   T  VGT  ++
Sbjct: 113 GLDYLHS--EKKI-HRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNT-FVGTPFWM 168

Query: 537 APEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKP 574
           APEV       ++ D++  GI  +E+  G  P  +  P
Sbjct: 169 APEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHP 206

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by interacting with the Golgi matrix protein GM130 and may play a role in cell migration. Length = 277

>gnl|CDD|132975 cd06644, STKc_STK10_LOK, Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

 Score = 71.2 bits (174), Expect = 2e-13
 Identities = 56/209 (26%), Positives = 100/209 (47%), Gaps = 14/209 (6%)

Query: 372 IGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCK 431
           +G G  GKVYK   +  GA  A K I  +++     ++ EI  L    H  +V L G   
Sbjct: 20  LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYMVEIEILATCNHPYIVKLLGAFY 79

Query: 432 REKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVL-KDVAAGVLYLHEGWEKKVL 490
            + G L ++ ++   G++D  + + D  +    E +I+V+ + +   + YLH     K++
Sbjct: 80  WD-GKLWIMIEFCPGGAVDAIMLELDRGLT---EPQIQVICRQMLEALQYLHS---MKII 132

Query: 491 HRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEV-----FSSGR 545
           HRD+K+ NVLL  + + +L DFG++  +    +      +GT  ++APEV          
Sbjct: 133 HRDLKAGNVLLTLDGDIKLADFGVSAKNVK-TLQRRDSFIGTPYWMAPEVVMCETMKDTP 191

Query: 546 ASTQTDVFGFGILILEVLSGRRPIEEGKP 574
              + D++  GI ++E+     P  E  P
Sbjct: 192 YDYKADIWSLGITLIEMAQIEPPHHELNP 220

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types. Length = 292

>gnl|CDD|132972 cd06641, STKc_MST3, Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

 Score = 70.9 bits (173), Expect = 2e-13
 Identities = 64/222 (28%), Positives = 102/222 (45%), Gaps = 34/222 (15%)

Query: 366 FSEENVIGVGGNGKVYKGVLEGGGAEIAVKRIS-HENDGGTRAFLAEISSLGRLKHKSLV 424
           F++   IG G  G+V+KG+       +A+K I   E +        EI+ L +     + 
Sbjct: 6   FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 65

Query: 425 GLRG-WCKREKGSLMLVY-------DYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAA 476
              G + K  K  +++ Y       D +E G LD+              +   +L+++  
Sbjct: 66  KYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDE-------------TQIATILREILK 112

Query: 477 GVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVAST----TRVVGT 532
           G+ YLH   EKK+ HRDIK++NVLL +    +L DFG+A     GQ+  T       VGT
Sbjct: 113 GLDYLHS--EKKI-HRDIKAANVLLSEHGEVKLADFGVA-----GQLTDTQIKRNTFVGT 164

Query: 533 VGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKP 574
             ++APEV       ++ D++  GI  +E+  G  P  E  P
Sbjct: 165 PFWMAPEVIKQSAYDSKADIWSLGITAIELAKGEPPHSELHP 206

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and intrauterine growth retardation. Length = 277

>gnl|CDD|133247 cd05116, PTKc_Syk, Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase

 Score = 70.4 bits (172), Expect = 2e-13
 Identities = 61/218 (27%), Positives = 112/218 (51%), Gaps = 15/218 (6%)

Query: 372 IGVGGNGKVYKGVLE--GGGAEIAVKRISHENDGGT--RAFLAEISSLGRLKHKSLVGLR 427
           +G G  G V KG+ +       +AVK + ++N+        L E + + +L +  +V + 
Sbjct: 3   LGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYIVRMI 62

Query: 428 GWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEK 487
           G C+ E  S MLV +  E G L+K++ +   +  ++ +    ++  V+ G+ YL E    
Sbjct: 63  GICEAE--SWMLVMELAELGPLNKFLQK---NKHVTEKNITELVHQVSMGMKYLEE---T 114

Query: 488 KVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRVVGT--VGYLAPEVFSSGR 545
             +HRD+ + NVLL  +   ++ DFGL++  G  +     +  G   V + APE  +  +
Sbjct: 115 NFVHRDLAARNVLLVTQHYAKISDFGLSKALGADENYYKAKTHGKWPVKWYAPECMNYYK 174

Query: 546 ASTQTDVFGFGILILEVLS-GRRPIEEGKPNLVEMVWE 582
            S+++DV+ FG+L+ E  S G++P +  K N V  + E
Sbjct: 175 FSSKSDVWSFGVLMWEAFSYGQKPYKGMKGNEVTQMIE 212

Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, migration, and phagocytosis. More recently, Syk expression has been detected in other cell types (including epithelial cells, vascular endothelial cells, neurons, hepatocytes, and melanocytes), suggesting a variety of biological functions in non-immune cells. Syk plays a critical role in maintaining vascular integrity and in wound healing during embryogenesis. It also regulates Vav3, which is important in osteoclast function including bone development. In breast epithelial cells, where Syk acts as a negative regulator for epidermal growth factor receptor (EGFR) signaling, loss of Syk expression is associated with abnormal proliferation during cancer development suggesting a potential role as a tumor suppressor. In mice, Syk has been shown to inhibit malignant transformation of mammary epithelial cells induced with murine mammary tumor virus (MMTV). Length = 257

>gnl|CDD|133205 cd05074, PTKc_Tyro3, Catalytic domain of the Protein Tyrosine Kinase, Tyro3

 Score = 70.7 bits (173), Expect = 2e-13
 Identities = 70/292 (23%), Positives = 137/292 (46%), Gaps = 42/292 (14%)

Query: 366 FSEENVIGVGGNGKVYKGVL---EGGGAEIAVKRISHENDGGT--RAFLAEISSLGRLKH 420
           F+   ++G G  G V +  L   +G   ++AVK +  +    +    FL E + +    H
Sbjct: 1   FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDH 60

Query: 421 KSLVGLRGWC--KREKGSL---MLVYDYMENGSLDKWIFQC---DGSMMLSCEERIRVLK 472
            +++ L G     R KG L   M++  +M++G L  ++      +    L  +  +R + 
Sbjct: 61  PNVIKLIGVSLRSRAKGRLPIPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMI 120

Query: 473 DVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHG---QVASTTRV 529
           D+A+G+ YL     K  +HRD+ + N +L++ M   + DFGL++    G   +    +++
Sbjct: 121 DIASGMEYLSS---KNFIHRDLAARNCMLNENMTVCVADFGLSKKIYSGDYYRQGCASKL 177

Query: 530 VGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLS-GRRP---IEEGKPNLVEMVWELMV 585
              V +LA E  +    +T +DV+ FG+ + E+++ G+ P   +E  +      ++  ++
Sbjct: 178 --PVKWLALESLADNVYTTHSDVWAFGVTMWEIMTRGQTPYAGVENSE------IYNYLI 229

Query: 586 QGKLLDALDARLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLE 637
           +G        RL+       D +E V  L   C  P+P+ RP+ + +   LE
Sbjct: 230 KGN-------RLKQP----PDCLEDVYELMCQCWSPEPKCRPSFQHLRDQLE 270

Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic factor. It is also expressed in osteoclasts and has a role in bone resorption. Length = 273

>gnl|CDD|132953 cd06622, PKc_MAPKK_PBS2_like, Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

 Score = 71.0 bits (174), Expect = 2e-13
 Identities = 65/208 (31%), Positives = 99/208 (47%), Gaps = 21/208 (10%)

Query: 372 IGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGT-RAFLAEISSLGRLKHKSLVGLRGWC 430
           +G G  G VYK +    G  +A+K I  E D       + E+  L +     +V   G  
Sbjct: 9   LGKGNYGSVYKVLHRPTGVTMAMKEIRLELDESKFNQIIMELDILHKAVSPYIVDFYGAF 68

Query: 431 KREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERI--RVLKDVAAGVLYLHEGWEKK 488
             E G++ +  +YM+ GSLDK      G       E +  R+   V  G+ +L E  E  
Sbjct: 69  FIE-GAVYMCMEYMDAGSLDK--LYAGGVATEGIPEDVLRRITYAVVKGLKFLKE--EHN 123

Query: 489 VLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQ-VASTTRV-VGTVGYLAPEVFSSGRA 546
           ++HRD+K +NVL++     +L DFG++     G  VAS  +  +G   Y+APE   SG  
Sbjct: 124 IIHRDVKPTNVLVNGNGQVKLCDFGVS-----GNLVASLAKTNIGCQSYMAPERIKSGGP 178

Query: 547 ------STQTDVFGFGILILEVLSGRRP 568
                 + Q+DV+  G+ ILE+  GR P
Sbjct: 179 NQNPTYTVQSDVWSLGLSILEMALGRYP 206

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Polymyxin B resistance protein 2 (PBS2) from Saccharomyces cerevisiae, Wis1 from Schizosaccharomyces pombe, and related proteins. PBS2 and Wis1 are components of stress-activated MAPK cascades in budding and fission yeast, respectively. PBS2 is the specific activator of the MAPK Hog1, which plays a central role in the response of budding yeast to stress including exposure to arsenite and hyperosmotic environments. Wis1 phosphorylates and activates the MAPK Sty1 (also called Spc1 or Phh1), which stimulates a transcriptional response to a wide range of cellular insults through the bZip transcription factors Atf1, Pcr1, and Pap1. Length = 286

>gnl|CDD|143354 cd07849, STKc_ERK1_2_like, Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

 Score = 71.2 bits (175), Expect = 3e-13
 Identities = 65/216 (30%), Positives = 103/216 (47%), Gaps = 17/216 (7%)

Query: 366 FSEENVIGVGGNGKVYKGVLEGGGAEIAVKRIS-HENDGGTRAFLAEISSLGRLKHKSLV 424
           +   + IG G  G V     +  G ++A+K+IS  E+    +  L EI  L R KH++++
Sbjct: 7   YQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEHQTFCQRTLREIKILRRFKHENII 66

Query: 425 GLRGWCKREKGSLM----LVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLY 480
           G+    +           +V + ME   L K I     +  LS +     L  +  G+ Y
Sbjct: 67  GILDIIRPPSFESFNDVYIVQELMET-DLYKLIK----TQHLSNDHIQYFLYQILRGLKY 121

Query: 481 LHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMH--GHGQVASTTRVVGTVGYLAP 538
           +H      VLHRD+K SN+LL+   + ++ DFGLAR+    H      T  V T  Y AP
Sbjct: 122 IHSA---NVLHRDLKPSNLLLNTNCDLKICDFGLARIADPEHDHTGFLTEYVATRWYRAP 178

Query: 539 EV-FSSGRASTQTDVFGFGILILEVLSGRRPIEEGK 573
           E+  +S   +   D++  G ++ E+LS  RP+  GK
Sbjct: 179 EIMLNSKGYTKAIDIWSVGCILAEMLSN-RPLFPGK 213

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase kinase from the Raf family. ERK1/2 have numerous substrates, many of which are nuclear and participate in transcriptional regulation of many cellular processes. They regulate cell growth, cell proliferation, and cell cycle progression from G1 to S phase. Although the distinct roles of ERK1 and ERK2 have not been fully determined, it is known that ERK2 can maintain most functions in the absence of ERK1, and that the deletion of ERK2 is embryonically lethal. The MAPK, Fus3, regulates yeast mating processes including mating-specific gene expression, G1 arrest, mating projection, and cell fusion. Length = 336

>gnl|CDD|234389 TIGR03903, TOMM_kin_cyc, TOMM system kinase/cyclase fusion protein

 Score = 73.3 bits (180), Expect = 3e-13
 Identities = 51/194 (26%), Positives = 92/194 (47%), Gaps = 18/194 (9%)

Query: 389 GAEIAVK--RISHENDGGTRA-FLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYME 445
           G E+A+K  R     +   RA F  E +   RL H ++V L    +   G L  V++Y+ 
Sbjct: 3   GHEVAIKLLRTDAPEEEHQRARFRRETALCARLYHPNIVALLDSGEAPPGLLFAVFEYVP 62

Query: 446 NGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLL---D 502
             +L + +   DG+  L   E  R++  V   +   H    + ++HRD+K  N+++    
Sbjct: 63  GRTL-REVLAADGA--LPAGETGRLMLQVLDALACAHN---QGIVHRDLKPQNIMVSQTG 116

Query: 503 KEMNGRLGDFGL------ARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFG 556
              + ++ DFG+       R      +  TT V+GT  Y APE       +  +D++ +G
Sbjct: 117 VRPHAKVLDFGIGTLLPGVRDADVATLTRTTEVLGTPTYCAPEQLRGEPVTPNSDLYAWG 176

Query: 557 ILILEVLSGRRPIE 570
           ++ LE L+G+R ++
Sbjct: 177 LIFLECLTGQRVVQ 190

This model represents proteins of 1350 in length, in multiple species of Burkholderia, in Acidovorax avenae subsp. citrulli AAC00-1 and Delftia acidovorans SPH-1, and in multiple copies in Sorangium cellulosum, in genomic neighborhoods that include a cyclodehydratase/docking scaffold fusion protein (TIGR03882) and a member of the thiazole/oxazole modified metabolite (TOMM) precursor family TIGR03795. It has a kinase domain in the N-terminal 300 amino acids, followed by a cyclase homology domain, followed by regions without named domain definitions. It is a probable bacteriocin-like metabolite biosynthesis protein [Cellular processes, Toxin production and resistance]. Length = 1266

>gnl|CDD|143367 cd07862, STKc_CDK6, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

 Score = 70.4 bits (172), Expect = 4e-13
 Identities = 66/234 (28%), Positives = 118/234 (50%), Gaps = 29/234 (12%)

Query: 372 IGVGGNGKVYKGV-LEGGGAEIAVKRI--SHENDGGTRAFLAEISSLGRLK---HKSLVG 425
           IG G  GKV+K   L+ GG  +A+KR+      +G   + + E++ L  L+   H ++V 
Sbjct: 9   IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVR 68

Query: 426 LRGWCK-----REKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIR-VLKDVAAGVL 479
           L   C      RE   L LV+++++   L  ++ +     + +  E I+ ++  +  G+ 
Sbjct: 69  LFDVCTVSRTDRET-KLTLVFEHVDQ-DLTTYLDKVPEPGVPT--ETIKDMMFQLLRGLD 124

Query: 480 YLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPE 539
           +LH     +V+HRD+K  N+L+      +L DFGLAR++      + T VV T+ Y APE
Sbjct: 125 FLHS---HRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQ--MALTSVVVTLWYRAPE 179

Query: 540 VFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDAL 593
           V      +T  D++  G +  E+   R+P+  G  ++ ++       GK+LD +
Sbjct: 180 VLLQSSYATPVDLWSVGCIFAEMFR-RKPLFRGSSDVDQL-------GKILDVI 225

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytoplasm. It is also present in the ruffling edge of spreading fibroblasts and may play a role in cell spreading. It binds to the p21 inhibitor without any effect on its own activity and it is overexpressed in squamous cell carcinomas and neuroblastomas. CDK6 has also been shown to inhibit cell differentiation in many cell types. Length = 290

>gnl|CDD|173699 cd05608, STKc_GRK1, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

 Score = 70.3 bits (172), Expect = 4e-13
 Identities = 56/201 (27%), Positives = 93/201 (46%), Gaps = 9/201 (4%)

Query: 372 IGVGGNGKVYKGVLEGGGAEIAVKRISHE---NDGGTRAFLAEISSLGRLKHKSLVGLRG 428
           +G GG G+V    +   G   A K+++ +      G    + E   L ++  + +V L  
Sbjct: 1   LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSL-A 59

Query: 429 WCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEER-IRVLKDVAAGVLYLHEGWEK 487
           +  + K  L LV   M  G L   I+  D       E R       + +G+ +LH+   +
Sbjct: 60  YAFQTKTDLCLVMTIMNGGDLRYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQ---R 116

Query: 488 KVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRAS 547
           ++++RD+K  NVLLD + N R+ D GLA     GQ + T    GT G++APE+       
Sbjct: 117 RIIYRDLKPENVLLDNDGNVRISDLGLAVELKDGQ-SKTKGYAGTPGFMAPELLQGEEYD 175

Query: 548 TQTDVFGFGILILEVLSGRRP 568
              D F  G+ + E+++ R P
Sbjct: 176 FSVDYFALGVTLYEMIAARGP 196

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual group of GRKs and is expressed in retinal cells. It phosphorylates rhodopsin in rod cells, which leads to termination of the phototransduction cascade. Mutations in GRK1 are associated to a recessively inherited form of stationary nightblindness called Oguchi disease. Length = 280

>gnl|CDD|173682 cd05591, STKc_nPKC_epsilon, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

 Score = 70.6 bits (173), Expect = 4e-13
 Identities = 63/206 (30%), Positives = 96/206 (46%), Gaps = 16/206 (7%)

Query: 371 VIGVGGNGKVYKGVLEGGGAEIAVKRISHE---NDGGTRAFLAE--ISSLGRLKHKSLVG 425
           V+G G  GKV    L+G     A+K +  +    D      + E  I +L   KH  L  
Sbjct: 2   VLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAA-KHPFLTA 60

Query: 426 LRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLK-DVAAGVLYLHEG 484
           L   C + K  L  V +Y+  G L   +FQ   S     E R R    +V   +++LH  
Sbjct: 61  LHC-CFQTKDRLFFVMEYVNGGDL---MFQIQRSRKFD-EPRSRFYAAEVTLALMFLHR- 114

Query: 485 WEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSG 544
               V++RD+K  N+LLD E + +L DFG+ +  G     +TT   GT  Y+APE+    
Sbjct: 115 --HGVIYRDLKLDNILLDAEGHCKLADFGMCK-EGILNGVTTTTFCGTPDYIAPEILQEL 171

Query: 545 RASTQTDVFGFGILILEVLSGRRPIE 570
                 D +  G+L+ E+++G+ P E
Sbjct: 172 EYGPSVDWWALGVLMYEMMAGQPPFE 197

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to neoplastic transformation depending on the cell type. It contributes to oncogenesis by inducing disordered cell growth and inhibiting cell death. It also plays a role in tumor invasion and metastasis. PKC-epsilon has also been found to confer cardioprotection against ischemia and reperfusion-mediated damage. Other cellular functions include the regulation of gene expression, cell adhesion, and cell motility. Length = 321

>gnl|CDD|133187 cd05056, PTKc_FAK, Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

 Score = 69.4 bits (170), Expect = 5e-13
 Identities = 70/274 (25%), Positives = 112/274 (40%), Gaps = 30/274 (10%)

Query: 371 VIGVGGNGKVYKGV---LEGGGAEIAVKRISHENDGGTRA-FLAEISSLGRLKHKSLVGL 426
            IG G  G VY+GV    E     +AVK   +      R  FL E   + +  H  +V L
Sbjct: 13  CIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFDHPHIVKL 72

Query: 427 RGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWE 486
            G     +  + +V +    G L  ++     S  L     I     ++  + YL     
Sbjct: 73  IGVI--TENPVWIVMELAPLGELRSYLQVNKYS--LDLASLILYSYQLSTALAYLES--- 125

Query: 487 KKVLHRDIKSSNVLLDKEMNGRLGDFGLAR-MHGHGQV-ASTTRVVGTVGYLAPEVFSSG 544
           K+ +HRDI + NVL+      +LGDFGL+R +       AS  ++   + ++APE  +  
Sbjct: 126 KRFVHRDIAARNVLVSSPDCVKLGDFGLSRYLEDESYYKASKGKL--PIKWMAPESINFR 183

Query: 545 RASTQTDVFGFGILILEVLS-GRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRAKGGF 603
           R ++ +DV+ FG+ + E+L  G +P +  K N V    E    G+ L             
Sbjct: 184 RFTSASDVWMFGVCMWEILMLGVKPFQGVKNNDVIGRIE---NGERLP-----------M 229

Query: 604 DEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLE 637
             +    +  L   C   DP  RP   ++   L 
Sbjct: 230 PPNCPPTLYSLMTKCWAYDPSKRPRFTELKAQLS 263

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions and at growth factor receptors. Through diverse molecular interactions, FAK functions as a biosensor or integrator to control cell motility. It is a key regulator of cell survival, proliferation, migration and invasion, and thus plays an important role in the development and progression of cancer. Src binds to autophosphorylated FAK forming the FAK-Src dual kinase complex, which is activated in a wide variety of tumor cells and generates signals promoting growth and metastasis. FAK is being developed as a target for cancer therapy. Length = 270

>gnl|CDD|173772 cd08530, STKc_CNK2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

 Score = 69.0 bits (169), Expect = 6e-13
 Identities = 59/214 (27%), Positives = 97/214 (45%), Gaps = 20/214 (9%)

Query: 365 GFSEENVIGVGGNGKVYKGVLEGGGAEIAVKR--ISHENDGGTRAFLAEISSLGRLKHKS 422
            F     +G G  G VYK          A+K   +   +       + EI  L  + H +
Sbjct: 1   DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPN 60

Query: 423 LVG-----LRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERI-RVLKDVAA 476
           ++      L G        L +V +Y   G L K I +      L  E+ I R+   +  
Sbjct: 61  IISYKEAFLDG------NKLCIVMEYAPFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLR 114

Query: 477 GVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYL 536
           G+  LHE   +K+LHRD+KS+N+LL      ++GD G++++     +A T   +GT  Y+
Sbjct: 115 GLQALHE---QKILHRDLKSANILLVANDLVKIGDLGISKV-LKKNMAKT--QIGTPHYM 168

Query: 537 APEVFSSGRASTQTDVFGFGILILEVLSGRRPIE 570
           APEV+     S ++D++  G L+ E+ +   P E
Sbjct: 169 APEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFE 202

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, and it regulates cell size, through influencing the size threshold at which cells commit to mitosis. Length = 256

>gnl|CDD|173648 cd05092, PTKc_TrkA, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

 Score = 69.6 bits (170), Expect = 6e-13
 Identities = 53/221 (23%), Positives = 109/221 (49%), Gaps = 33/221 (14%)

Query: 372 IGVGGNGKVYKG-----VLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGL 426
           +G G  GKV+       + E     +AVK +   ++   + F  E   L  L+H+ +V  
Sbjct: 13  LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTVLQHQHIVRF 72

Query: 427 RGWCKREKGSLMLVYDYMENGSLDKWIFQ-------CDGSMMLSC-----EERIRVLKDV 474
            G C  E   L++V++YM +G L++++           G   ++       + + +   +
Sbjct: 73  YGVCT-EGRPLLMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQI 131

Query: 475 AAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTT--RVVG- 531
           A+G++YL        +HRD+ + N L+ + +  ++GDFG++R      + ST   RV G 
Sbjct: 132 ASGMVYLAS---LHFVHRDLATRNCLVGQGLVVKIGDFGMSR-----DIYSTDYYRVGGR 183

Query: 532 ---TVGYLAPEVFSSGRASTQTDVFGFGILILEVLS-GRRP 568
               + ++ PE     + +T++D++ FG+++ E+ + G++P
Sbjct: 184 TMLPIRWMPPESILYRKFTTESDIWSFGVVLWEIFTYGKQP 224

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory and sympathetic neurons of the peripheral nervous system, and in basal forebrain cholinergic neurons of the central nervous system. It is critical for neuronal growth, differentiation and survival. Alternative TrkA splicing has been implicated as a pivotal regulator of neuroblastoma (NB) behavior. Normal TrkA expression is associated with better NB prognosis, while the hypoxia-regulated TrkAIII splice variant promotes NB pathogenesis and progression. Aberrant TrkA expression has also been demonstrated in non-neural tumors including prostate, breast, lung, and pancreatic cancers. Length = 280

>gnl|CDD|173684 cd05593, STKc_PKB_gamma, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

 Score = 70.1 bits (171), Expect = 6e-13
 Identities = 50/161 (31%), Positives = 80/161 (49%), Gaps = 10/161 (6%)

Query: 409 LAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERI 468
           L E   L   +H  L  L+ +  + K  L  V +Y+  G L    F      + S E+R 
Sbjct: 43  LTESRVLKNTRHPFLTSLK-YSFQTKDRLCFVMEYVNGGEL---FFHLSRERVFS-EDRT 97

Query: 469 RVL-KDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTT 527
           R    ++ + + YLH G   K+++RD+K  N++LDK+ + ++ DFGL +  G    A+  
Sbjct: 98  RFYGAEIVSALDYLHSG---KIVYRDLKLENLMLDKDGHIKITDFGLCK-EGITDAATMK 153

Query: 528 RVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRP 568
              GT  YLAPEV          D +G G+++ E++ GR P
Sbjct: 154 TFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 194

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulated in estrogen-deficient breast cancer cells, androgen-independent prostate cancer cells, and primary ovarian tumors. It acts as a key mediator in the genesis of ovarian cancer. Length = 328

>gnl|CDD|173680 cd05589, STKc_PKN, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

 Score = 69.7 bits (171), Expect = 7e-13
 Identities = 53/169 (31%), Positives = 76/169 (44%), Gaps = 25/169 (14%)

Query: 406 RAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWI----FQCDGSMM 461
           R F          +H  LV L   C + +  +  V +Y   G L   I    F    ++ 
Sbjct: 51  RIFET----ANSERHPFLVNLFA-CFQTEDHVCFVMEYAAGGDLMMHIHTDVFSEPRAVF 105

Query: 462 LSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLAR--MHG 519
            +          V  G+ YLHE    K+++RD+K  N+LLD E   ++ DFGL +  M G
Sbjct: 106 YAAC--------VVLGLQYLHE---NKIVYRDLKLDNLLLDTEGFVKIADFGLCKEGM-G 153

Query: 520 HGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRP 568
            G   ST    GT  +LAPEV +    +   D +G G+LI E+L G  P
Sbjct: 154 FGDRTST--FCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGESP 200

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved in many biological processes including cytokeletal regulation, cell adhesion, vesicle transport, glucose transport, regulation of meiotic maturation and embryonic cell cycles, signaling to the nucleus, and tumorigenesis. Length = 324

>gnl|CDD|165476 PHA03210, PHA03210, serine/threonine kinase US3; Provisional

 Score = 71.3 bits (174), Expect = 7e-13
 Identities = 69/269 (25%), Positives = 122/269 (45%), Gaps = 40/269 (14%)

Query: 395 KRISHENDGGTRAFLA---EISSLGRLKHKSLVGLRGWCKREKGSLML-------VYDYM 444
           + I+     G+RA +    EI +LGRL H++++ +    + E  + M+       +Y +M
Sbjct: 194 RLIAKRVKAGSRAAIQLENEILALGRLNHENILKIEEILRSEANTYMITQKYDFDLYSFM 253

Query: 445 ENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKE 504
            + + D W    D  ++   ++   ++K +   V Y+H+   KK++HRDIK  N+ L+ +
Sbjct: 254 YDEAFD-WK---DRPLL---KQTRAIMKQLLCAVEYIHD---KKLIHRDIKLENIFLNCD 303

Query: 505 MNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLS 564
               LGDFG A      + A     VGTV   +PE+ +       TD++  G+++L++LS
Sbjct: 304 GKIVLGDFGTAMPFEKEREAFDYGWVGTVATNSPEILAGDGYCEITDIWSCGLILLDMLS 363

Query: 565 GRR-PIEEGKPN----LVEMVWELMV--------QGKLLDALDARLRAKGGFDEDEVERV 611
               PI +G       L++++  L V          KL D +D+      G     + R 
Sbjct: 364 HDFCPIGDGGGKPGKQLLKIIDSLSVCDEEFPDPPCKLFDYIDSAEIDHAGHSVPPLIRN 423

Query: 612 LHLGLLCAYP-------DPRARPTMRQVV 633
           L L     YP       D   RP   +++
Sbjct: 424 LGLPADFEYPLVKMLTFDWHLRPGAAELL 452

Length = 501

>gnl|CDD|132946 cd06615, PKc_MEK, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

 Score = 69.8 bits (171), Expect = 8e-13
 Identities = 59/213 (27%), Positives = 98/213 (46%), Gaps = 26/213 (12%)

Query: 366 FSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTR-AFLAEISSLGRLKHKSLV 424
           F +   +G G  G V K +    G  +A K I  E     R   + E+  L       +V
Sbjct: 3   FEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEIKPAIRNQIIRELKVLHECNSPYIV 62

Query: 425 GLRG--WCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERI------RVLKDVAA 476
           G  G  +   E    M   ++M+ GSLD+         +L    RI      ++   V  
Sbjct: 63  GFYGAFYSDGEISICM---EHMDGGSLDQ---------VLKKAGRIPENILGKISIAVLR 110

Query: 477 GVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYL 536
           G+ YL E  + K++HRD+K SN+L++     +L DFG++       +A++   VGT  Y+
Sbjct: 111 GLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQL-IDSMANS--FVGTRSYM 165

Query: 537 APEVFSSGRASTQTDVFGFGILILEVLSGRRPI 569
           +PE       + Q+D++  G+ ++E+  GR PI
Sbjct: 166 SPERLQGTHYTVQSDIWSLGLSLVEMAIGRYPI 198

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the downstream targets, ERK(extracellular signal-regulated kinase) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK1/2, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. This cascade has also been implicated in synaptic plasticity, migration, morphological determination, and stress response immunological reactions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK1/2, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. Length = 308

>gnl|CDD|133192 cd05061, PTKc_InsR, Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor

 Score = 69.2 bits (169), Expect = 8e-13
 Identities = 72/280 (25%), Positives = 133/280 (47%), Gaps = 31/280 (11%)

Query: 372 IGVGGNGKVYKGVLEG---GGAE--IAVKRISHENDGGTR-AFLAEISSLGRLKHKSLVG 425
           +G G  G VY+G       G AE  +AVK ++       R  FL E S +       +V 
Sbjct: 14  LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 73

Query: 426 LRGWCKREKGSLMLVYDYMENGSLDKWI--FQCD-----GSMMLSCEERIRVLKDVAAGV 478
           L G   + + +L +V + M +G L  ++   + +     G    + +E I++  ++A G+
Sbjct: 74  LLGVVSKGQPTL-VVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 132

Query: 479 LYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLAR-MHGHGQVASTTRVVGTVGYLA 537
            YL+    KK +HRD+ + N ++  +   ++GDFG+ R ++         + +  V ++A
Sbjct: 133 AYLNA---KKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMA 189

Query: 538 PEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDARL 597
           PE    G  +T +D++ FG+++ E+ S      +G  N  E V + ++ G  LD      
Sbjct: 190 PESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSN--EQVLKFVMDGGYLDQ----- 242

Query: 598 RAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLE 637
                  ++  ERV  L  +C   +P+ RPT  ++V +L+
Sbjct: 243 ------PDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLK 276

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein metabolism, ion and amino acid transport, cell cycle and proliferation, cell differentiation, gene transcription, and nitric oxide synthesis. Insulin resistance, caused by abnormalities in InsR signaling, has been described in diabetes, hypertension, cardiovascular disease, metabolic syndrome, heart failure, and female infertility. Length = 288

>gnl|CDD|133228 cd05097, PTKc_DDR_like, Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases

 Score = 69.2 bits (169), Expect = 9e-13
 Identities = 47/184 (25%), Positives = 91/184 (49%), Gaps = 15/184 (8%)

Query: 392 IAVKRISHENDGGTRA-FLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLD 450
           +AVK +  +     R  FL EI  + RLK+ +++ L G C  +   L ++ +YMENG L+
Sbjct: 47  VAVKMLRADVTKTARNDFLKEIKIMSRLKNPNIIRLLGVCVSDD-PLCMITEYMENGDLN 105

Query: 451 KWIFQ---------CDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLL 501
           +++ Q          +    +S    + +   +A+G+ YL        +HRD+ + N L+
Sbjct: 106 QFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLAS---LNFVHRDLATRNCLV 162

Query: 502 DKEMNGRLGDFGLAR-MHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILIL 560
                 ++ DFG++R ++         R V  + ++A E    G+ +T +DV+ FG+ + 
Sbjct: 163 GNHYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLW 222

Query: 561 EVLS 564
           E+ +
Sbjct: 223 EMFT 226

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including breast, colon, ovarian, brain, and lung. There is no evidence showing that DDRs act as transforming oncogenes. They are more likely to play a role in the regulation of tumor growth and metastasis. Length = 295

>gnl|CDD|173681 cd05590, STKc_nPKC_eta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

 Score = 69.5 bits (170), Expect = 1e-12
 Identities = 64/217 (29%), Positives = 100/217 (46%), Gaps = 17/217 (7%)

Query: 371 VIGVGGNGKVYKGVLEGGGAEIAVKRISHE---NDGGTRAFLAE--ISSLGRLKHKSLVG 425
           V+G G  GKV    L+  G   AVK +  +    D      + E  I SL R  H  L  
Sbjct: 2   VLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLAR-NHPFLTQ 60

Query: 426 LRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLK-DVAAGVLYLHEG 484
           L   C +    L  V +++  G L   +F    S     E R R    ++ + +++LH+ 
Sbjct: 61  LY-CCFQTPDRLFFVMEFVNGGDL---MFHIQKSRRFD-EARARFYAAEITSALMFLHD- 114

Query: 485 WEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSG 544
             K +++RD+K  NVLLD E + +L DFG+ +        ++T   GT  Y+APE+    
Sbjct: 115 --KGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGIFNGKTTST-FCGTPDYIAPEILQEM 171

Query: 545 RASTQTDVFGFGILILEVLSGRRPIE-EGKPNLVEMV 580
                 D +  G+L+ E+L G  P E E + +L E +
Sbjct: 172 LYGPSVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAI 208

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signaling of cell-type specific differentiation. It is also expressed in pro-B cells and early-stage thymocytes, and acts as a key regulator in early B-cell development. PKC-eta increases glioblastoma multiforme (GBM) proliferation and resistance to radiation, and is being developed as a therapeutic target for the management of GBM. Length = 320

>gnl|CDD|173769 cd08229, STKc_Nek7, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

 Score = 68.5 bits (167), Expect = 1e-12
 Identities = 68/274 (24%), Positives = 123/274 (44%), Gaps = 20/274 (7%)

Query: 366 FSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHEN--DGGTRA-FLAEISSLGRLKHKS 422
           F  E  IG G   +VY+      G  +A+K++   +  D   RA  + EI  L +L H +
Sbjct: 4   FRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPN 63

Query: 423 LVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERI-RVLKDVAAGVLYL 481
           ++        E   L +V +  + G L + I        L  E+ + +    + + + ++
Sbjct: 64  VIKYYA-SFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHM 122

Query: 482 HEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVF 541
           H    ++V+HRDIK +NV +      +LGD GL R       A+ + +VGT  Y++PE  
Sbjct: 123 HS---RRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHS-LVGTPYYMSPERI 178

Query: 542 SSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRAKG 601
                + ++D++  G L+ E+ + + P    K NL  +        K ++  D       
Sbjct: 179 HENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLC-------KKIEQCDYPPLPSD 231

Query: 602 GFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKV 635
            + E E+ ++++   +C  PDP  RP +  V  V
Sbjct: 232 HYSE-ELRQLVN---MCINPDPEKRPDITYVYDV 261

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase. Length = 267

>gnl|CDD|173702 cd05611, STKc_Rim15_like, Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

 Score = 68.3 bits (167), Expect = 1e-12
 Identities = 45/149 (30%), Positives = 68/149 (45%), Gaps = 11/149 (7%)

Query: 429 WCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKK 488
           +  + K  L LV +Y+  G     I    G   L  +   + + +V  GV  LH+   + 
Sbjct: 64  YSFQSKDYLYLVMEYLNGGDCASLIKTLGG---LPEDWAKQYIAEVVLGVEDLHQ---RG 117

Query: 489 VLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRAST 548
           ++HRDIK  N+L+D+  + +L DFGL+R           + VGT  YLAPE         
Sbjct: 118 IIHRDIKPENLLIDQTGHLKLTDFGLSRN-----GLENKKFVGTPDYLAPETILGVGDDK 172

Query: 549 QTDVFGFGILILEVLSGRRPIEEGKPNLV 577
            +D +  G +I E L G  P     P+ V
Sbjct: 173 MSDWWSLGCVIFEFLFGYPPFHAETPDAV 201

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a downstream effector of PKA and regulates entry into stationary phase (G0). Thus, it plays a crucial role in regulating yeast proliferation, differentiation, and aging. Cek1 may facilitate progression of mitotic anaphase. Length = 260

>gnl|CDD|132951 cd06620, PKc_MAPKK_Byr1_like, Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

 Score = 68.3 bits (167), Expect = 1e-12
 Identities = 59/212 (27%), Positives = 99/212 (46%), Gaps = 32/212 (15%)

Query: 434 KGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRD 493
           + ++ +  ++M+ GSLD+ I++  G + +    +I V   V  G+ YL+     +++HRD
Sbjct: 75  ENNICMCMEFMDCGSLDR-IYKKGGPIPVEILGKIAV--AVVEGLTYLYN--VHRIMHRD 129

Query: 494 IKSSNVLLDKEMNGRLGDFGLARMHGHGQ----VASTTRVVGTVGYLAPEVFSSGRASTQ 549
           IK SN+L++     +L DFG++     G+    +A T   VGT  Y++PE    G+ + +
Sbjct: 130 IKPSNILVNSRGQIKLCDFGVS-----GELINSIADT--FVGTSTYMSPERIQGGKYTVK 182

Query: 550 TDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALD-------ARLRAKGG 602
           +DV+  GI I+E+  G+ P                    +LD L         RL     
Sbjct: 183 SDVWSLGISIIELALGKFPFAFSN----IDDDGQDDPMGILDLLQQIVQEPPPRL-PSSD 237

Query: 603 FDEDEVERVLHLGLLCAYPDPRARPTMRQVVK 634
           F ED  + V      C   DP  RPT +Q+  
Sbjct: 238 FPEDLRDFV----DACLLKDPTERPTPQQLCA 265

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Byr1 from Schizosaccharomyces pombe, FUZ7 from Ustilago maydis, and related proteins. Byr1 phosphorylates its downstream target, the MAPK Spk1, and is regulated by the MAPKKK Byr2. The Spk1 cascade is pheromone-responsive and is essential for sporulation and sexual differentiation in fission yeast. FUZ7 phosphorylates and activates its target, the MAPK Crk1, which is required in mating and virulence in U. maydis. Length = 284

>gnl|CDD|132980 cd06649, PKc_MEK2, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

 Score = 68.9 bits (168), Expect = 1e-12
 Identities = 60/207 (28%), Positives = 99/207 (47%), Gaps = 26/207 (12%)

Query: 372 IGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTR-AFLAEISSLGRLKHKSLVGLRGWC 430
           +G G  G V K   +  G  +A K I  E     R   + E+  L       +VG  G  
Sbjct: 13  LGAGNGGVVTKVQHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF 72

Query: 431 KREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERI--RVLKDVAAGVL----YLHEG 484
             + G + +  ++M+ GSLD+         +L   +RI   +L  V+  VL    YL E 
Sbjct: 73  YSD-GEISICMEHMDGGSLDQ---------VLKEAKRIPEEILGKVSIAVLRGLAYLRE- 121

Query: 485 WEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVAST--TRVVGTVGYLAPEVFS 542
            + +++HRD+K SN+L++     +L DFG++     GQ+  +     VGT  Y++PE   
Sbjct: 122 -KHQIMHRDVKPSNILVNSRGEIKLCDFGVS-----GQLIDSMANSFVGTRSYMSPERLQ 175

Query: 543 SGRASTQTDVFGFGILILEVLSGRRPI 569
               S Q+D++  G+ ++E+  GR PI
Sbjct: 176 GTHYSVQSDIWSMGLSLVELAIGRYPI 202

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downstream targets, extracellular signal-regulated kinase (ERK) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK2, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK2, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. Length = 331

>gnl|CDD|173709 cd05619, STKc_nPKC_theta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

 Score = 68.8 bits (168), Expect = 1e-12
 Identities = 55/203 (27%), Positives = 95/203 (46%), Gaps = 14/203 (6%)

Query: 371 VIGVGGNGKVYKGVLEGGGAEIAVKRISHE---NDGGTRAFLAEISSLG-RLKHKSLVGL 426
           ++G G  GKV+   L+G     A+K +  +    D      + E   L    +H  L  L
Sbjct: 2   MLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHL 61

Query: 427 RGWCK-REKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGW 485
             +C  + K +L  V +Y+  G L   +F                  ++  G+ +LH   
Sbjct: 62  --YCTFQTKENLFFVMEYLNGGDL---MFHIQSCHKFDLPRATFYAAEIICGLQFLHS-- 114

Query: 486 EKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGR 545
            K +++RD+K  N+LLD + + ++ DFG+ + +  G  A T    GT  Y+APE+    +
Sbjct: 115 -KGIVYRDLKLDNILLDTDGHIKIADFGMCKENMLGD-AKTCTFCGTPDYIAPEILLGQK 172

Query: 546 ASTQTDVFGFGILILEVLSGRRP 568
            +T  D + FG+L+ E+L G+ P
Sbjct: 173 YNTSVDWWSFGVLLYEMLIGQSP 195

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in several aspects of T-cell biology. Although T-cells also express other PKC isoforms, PKC-theta is unique in that upon antigen stimulation, it is translocated to the plasma membrane at the immunological synapse, where it mediates signals essential for T-cell activation. It is essential for TCR-induced proliferation, cytokine production, T-cell survival, and the differentiation and effector function of T-helper (Th) cells, particularly Th2 and Th17. PKC-theta is being developed as a therapeutic target for Th2-mediated allergic inflammation and Th17-mediated autoimmune diseases. Length = 316

>gnl|CDD|133232 cd05101, PTKc_FGFR2, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2

 Score = 68.5 bits (167), Expect = 2e-12
 Identities = 70/263 (26%), Positives = 126/263 (47%), Gaps = 35/263 (13%)

Query: 392 IAVKRISHENDGGTRAFLAEISSLGRL-----KHKSLVGLRGWCKREKGSLMLVYDYMEN 446
           +AVK +    D  T   L+++ S   +     KHK+++ L G C ++ G L ++ +Y   
Sbjct: 50  VAVKML---KDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD-GPLYVIVEYASK 105

Query: 447 GSLDKWIFQCDGSMMLSCEERIRV------LKDVAAGVLYLHEGWE----KKVLHRDIKS 496
           G+L +++       M    +  RV       KD+ +    +  G E    +K +HRD+ +
Sbjct: 106 GNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQKCIHRDLAA 165

Query: 497 SNVLLDKEMNGRLGDFGLAR-MHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGF 555
            NVL+ +    ++ DFGLAR ++       TT     V ++APE       + Q+DV+ F
Sbjct: 166 RNVLVTENNVMKIADFGLARDVNNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSF 225

Query: 556 GILILEVLS-GRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRAKGGFDEDEVERVLHL 614
           G+L+ E+ + G  P   G P  VE +++L+ +G  +D        K     +E+  ++  
Sbjct: 226 GVLMWEIFTLGGSPY-PGIP--VEELFKLLKEGHRMD--------KPANCTNELYMMMR- 273

Query: 615 GLLCAYPDPRARPTMRQVVKVLE 637
              C +  P  RPT +Q+V+ L+
Sbjct: 274 --DCWHAIPSHRPTFKQLVEDLD 294

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. There are many splice variants of FGFR2 which show differential expression and binding to FGF ligands. Disruption of either FGFR2 or FGFR2b is lethal in mice, due to defects in the placenta or severe impairment of tissue development including lung, limb, and thyroid, respectively. Disruption of FGFR2c in mice results in defective bone and skull development. Genetic alterations of FGFR2 are associated with many human skeletal disorders including Apert syndrome, Crouzon syndrome, Jackson-Weiss syndrome, and Pfeiffer syndrome. Length = 304

>gnl|CDD|143363 cd07858, STKc_TEY_MAPK_plant, Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

 Score = 68.9 bits (169), Expect = 2e-12
 Identities = 62/209 (29%), Positives = 100/209 (47%), Gaps = 16/209 (7%)

Query: 372 IGVGGNGKVYKGVLEGGGAEIAVKRISH--ENDGGTRAFLAEISSLGRLKHKSLVGLRGW 429
           IG G  G V          ++A+K+I++  +N    +  L EI  L  L H++++ ++  
Sbjct: 13  IGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDHENVIAIKDI 72

Query: 430 ----CKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGW 485
                +     + +VY+ M+   L + I     S  LS +     L  +  G+ Y+H   
Sbjct: 73  MPPPHREAFNDVYIVYELMDT-DLHQII---RSSQTLSDDHCQYFLYQLLRGLKYIHSA- 127

Query: 486 EKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEV-FSSG 544
              VLHRD+K SN+LL+   + ++ DFGLAR         T  VV T  Y APE+  +  
Sbjct: 128 --NVLHRDLKPSNLLLNANCDLKICDFGLARTTSEKGDFMTEYVV-TRWYRAPELLLNCS 184

Query: 545 RASTQTDVFGFGILILEVLSGRRPIEEGK 573
             +T  DV+  G +  E+L GR+P+  GK
Sbjct: 185 EYTTAIDVWSVGCIFAELL-GRKPLFPGK 212

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activation loop, TEY and TDY. This subfamily represents the TEY subtype and is further subdivided into three groups (A, B, and C). Group A is represented by AtMPK3, AtMPK6, Nicotiana tabacum BTF4 (NtNTF4), among others. They are mostly involved in environmental and hormonal responses. AtMPK3 and AtMPK6 are also key regulators for stomatal development and patterning. Group B is represented by AtMPK4, AtMPK13, and NtNTF6, among others. They may be involved in both cell division and environmental stress response. AtMPK4 also participates in regulating innate immunity. Group C is represented by AtMPK1, AtMPK2, NtNTF3, Oryza sativa MAPK4 (OsMAPK4), among others. They may also be involved in stress responses. AtMPK1 and AtMPK2 are activated following mechanical injury and in the presence of stress chemicals such as jasmonic acid, hydrogen peroxide and abscisic acid. OsMAPK4 is also called OsMSRMK3 for Multiple Stress-Responsive MAPK3. Length = 337

>gnl|CDD|173632 cd05051, PTKc_DDR, Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors

 Score = 68.5 bits (168), Expect = 2e-12
 Identities = 51/200 (25%), Positives = 92/200 (46%), Gaps = 32/200 (16%)

Query: 392 IAVKRI-SHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLD 450
           +AVK +    +D     FL E+  L RL   ++  L G C  +   L ++ +YMENG L+
Sbjct: 49  VAVKVLRPDASDNAREDFLKEVKILSRLSDPNIARLLGVCTVDP-PLCMIMEYMENGDLN 107

Query: 451 KWI--------FQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLD 502
           +++             S  LS    + +   +A+G+ YL        +HRD+ + N L+ 
Sbjct: 108 QFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLES---LNFVHRDLATRNCLVG 164

Query: 503 KEMNGRLGDFGLAR---------MHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVF 553
           K    ++ DFG++R         + G        R    + ++A E    G+ +T++DV+
Sbjct: 165 KNYTIKIADFGMSRNLYSSDYYRVQG--------RAPLPIRWMAWESVLLGKFTTKSDVW 216

Query: 554 GFGILILEVLS--GRRPIEE 571
            FG+ + E+L+    +P E 
Sbjct: 217 AFGVTLWEILTLCREQPYEH 236

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including breast, colon, ovarian, brain, and lung. There is no evidence showing that DDRs act as transforming oncogenes. They are more likely to play a role in the regulation of tumor growth and metastasis. Length = 296

>gnl|CDD|173708 cd05617, STKc_aPKC_zeta, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta

 Score = 68.5 bits (167), Expect = 2e-12
 Identities = 44/148 (29%), Positives = 74/148 (50%), Gaps = 8/148 (5%)

Query: 423 LVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLH 482
           LVGL   C +    L LV +Y+  G L   +F       L  E       ++   + +LH
Sbjct: 58  LVGLHS-CFQTTSRLFLVIEYVNGGDL---MFHMQRQRKLPEEHARFYAAEICIALNFLH 113

Query: 483 EGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFS 542
           E   + +++RD+K  NVLLD + + +L D+G+ +  G G   +T+   GT  Y+APE+  
Sbjct: 114 E---RGIIYRDLKLDNVLLDADGHIKLTDYGMCK-EGLGPGDTTSTFCGTPNYIAPEILR 169

Query: 543 SGRASTQTDVFGFGILILEVLSGRRPIE 570
                   D +  G+L+ E+++GR P +
Sbjct: 170 GEEYGFSVDWWALGVLMFEMMAGRSPFD 197

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways. PKC-zeta also plays a central role in maintaining cell polarity in yeast and mammalian cells. In addition, it affects actin remodeling in muscle cells. Length = 327

>gnl|CDD|88519 cd05618, STKc_aPKC_iota, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

 Score = 68.5 bits (167), Expect = 2e-12
 Identities = 45/151 (29%), Positives = 75/151 (49%), Gaps = 8/151 (5%)

Query: 420 HKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVL 479
           H  LVGL   C + +  L  V +Y+  G L   +F       L  E       +++  + 
Sbjct: 55  HPFLVGLHS-CFQTESRLFFVIEYVNGGDL---MFHMQRQRKLPEEHARFYSAEISLALN 110

Query: 480 YLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPE 539
           YLHE   + +++RD+K  NVLLD E + +L D+G+ +  G     +T+   GT  Y+APE
Sbjct: 111 YLHE---RGIIYRDLKLDNVLLDSEGHIKLTDYGMCK-EGLRPGDTTSTFCGTPNYIAPE 166

Query: 540 VFSSGRASTQTDVFGFGILILEVLSGRRPIE 570
           +          D +  G+L+ E+++GR P +
Sbjct: 167 ILRGEDYGFSVDWWALGVLMFEMMAGRSPFD 197

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target of tumor-specific gene amplification in many human cancers, and has been identified as a human oncogene. In addition to its role in transformed growth, PKC-iota also promotes invasion, chemoresistance, and tumor cell survival. Expression profiling of PKC-iota is a prognostic marker of poor clinical outcome in several human cancers. PKC-iota also plays a role in establishing cell polarity, and has critical embryonic functions. Length = 329

>gnl|CDD|132989 cd06658, STKc_PAK5, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

 Score = 68.1 bits (166), Expect = 2e-12
 Identities = 66/264 (25%), Positives = 116/264 (43%), Gaps = 23/264 (8%)

Query: 372 IGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCK 431
           IG G  G V     +  G ++AVK++             E+  +    H+++V +     
Sbjct: 30  IGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHENVVDMYN-SY 88

Query: 432 REKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLH 491
                L +V +++E G+L   +        ++ E+   V   V   + YLH    + V+H
Sbjct: 89  LVGDELWVVMEFLEGGALTDIVTH----TRMNEEQIATVCLSVLRALSYLHN---QGVIH 141

Query: 492 RDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTD 551
           RDIKS ++LL  +   +L DFG        +V     +VGT  ++APEV S     T+ D
Sbjct: 142 RDIKSDSILLTSDGRIKLSDFGFCAQVSK-EVPKRKSLVGTPYWMAPEVISRLPYGTEVD 200

Query: 552 VFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRAKGGFDEDEVERV 611
           ++  GI+++E++ G  P     P        L    ++ D L  R++     D  +V  V
Sbjct: 201 IWSLGIMVIEMIDGEPPYFNEPP--------LQAMRRIRDNLPPRVK-----DSHKVSSV 247

Query: 612 LHLGL-LCAYPDPRARPTMRQVVK 634
           L   L L    +P  R T +++++
Sbjct: 248 LRGFLDLMLVREPSQRATAQELLQ 271

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly expressed in the brain. It is not required for viability, but together with PAK6, it is required for normal levels of locomotion and activity, and for learning and memory. PAK5 cooperates with Inca (induced in neural crest by AP2) in the regulation of cell adhesion and cytoskeletal organization in the embryo and in neural crest cells during craniofacial development. PAK5 may also play a role in controlling the signaling of Raf-1, an effector of Ras, at the mitochondria. Length = 292

>gnl|CDD|173734 cd07830, STKc_MAK_like, Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

 Score = 67.9 bits (167), Expect = 2e-12
 Identities = 59/210 (28%), Positives = 99/210 (47%), Gaps = 35/210 (16%)

Query: 372 IGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAF--------LAEISSLGRLK-HKS 422
           +G G  G VY    +  G  +A+K++        + F        L E+ SL +L  H +
Sbjct: 7   LGDGTFGSVYLARNKETGELVAIKKM-------KKKFYSWEECMNLREVKSLRKLNEHPN 59

Query: 423 LVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIR-VLKDVAAGVLYL 481
           +V L+    RE   L  V++YME G+L + +    G      E  IR ++  +  G+ ++
Sbjct: 60  IVKLKE-VFRENDELYFVFEYME-GNLYQLMKDRKGKPF--SESVIRSIIYQILQGLAHI 115

Query: 482 HE-GWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVAST---TRVVGTVGYLA 537
           H+ G+     HRD+K  N+L+      ++ DFGLAR     ++ S    T  V T  Y A
Sbjct: 116 HKHGF----FHRDLKPENLLVSGPEVVKIADFGLAR-----EIRSRPPYTDYVSTRWYRA 166

Query: 538 PEVF-SSGRASTQTDVFGFGILILEVLSGR 566
           PE+   S   S+  D++  G ++ E+ + R
Sbjct: 167 PEILLRSTSYSSPVDIWALGCIMAELYTLR 196

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertility. It functions as a coactivator of the androgen receptor in prostate cells. MRK, also called Intestinal Cell Kinase (ICK), is expressed ubiquitously, with highest expression in the ovary and uterus. A missense mutation in MRK causes endocrine-cerebro-osteodysplasia (ECO), suggesting that this protein plays an important role in the development of many organs. MAK and MRK may be involved in regulating cell cycle and cell fate. Ime2p is a meiosis-specific kinase that is important during meiotic initiation and during the later stages of meiosis. Mde3 functions downstream of the transcription factor Mei-4 which is essential for meiotic prophase I. Length = 283

>gnl|CDD|173655 cd05110, PTKc_HER4, Catalytic domain of the Protein Tyrosine Kinase, HER4

 Score = 68.2 bits (166), Expect = 2e-12
 Identities = 70/257 (27%), Positives = 125/257 (48%), Gaps = 38/257 (14%)

Query: 371 VIGVGGNGKVYKGVL--EGGGAEIAVK-RISHENDG--GTRAFLAEISSLGRLKHKSLVG 425
           V+G G  G VYKG+   EG   +I V  +I +E  G      F+ E   +  + H  LV 
Sbjct: 14  VLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVR 73

Query: 426 LRGWCKREKGSLMLVYDYMENGSLDKWIFQCD---GSMMLSCEERIRVLKDVAAGVLYLH 482
           L G C     ++ LV   M +G L  ++ +     GS +L     +     +A G++YL 
Sbjct: 74  LLGVCLSP--TIQLVTQLMPHGCLLDYVHEHKDNIGSQLL-----LNWCVQIAKGMMYLE 126

Query: 483 EGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLAR-MHGHGQVASTTRVVGTVGYLAPEVF 541
           E   ++++HRD+ + NVL+    + ++ DFGLAR + G  +  +       + ++A E  
Sbjct: 127 E---RRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECI 183

Query: 542 SSGRASTQTDVFGFGILILEVLS-GRRPIE----EGKPNLVEM-------------VWEL 583
              + + Q+DV+ +G+ I E+++ G +P +       P+L+E              V+ +
Sbjct: 184 HYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTREIPDLLEKGERLPQPPICTIDVYMV 243

Query: 584 MVQGKLLDALDARLRAK 600
           MV+  ++DA D+R + K
Sbjct: 244 MVKCWMIDA-DSRPKFK 259

Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Ligands that bind HER4 fall into two groups, the neuregulins (or heregulins) and some EGFR (HER1) ligands including betacellulin, HBEGF, and epiregulin. All four neuregulins (NRG1-4) interact with HER4. Upon ligand binding, HER4 forms homo- or heterodimers with other HER proteins. HER4 is essential in embryonic development. It is implicated in mammary gland, cardiac, and neural development. As a postsynaptic receptor of NRG1, HER4 plays an important role in synaptic plasticity and maturation. The impairment of NRG1/HER4 signaling may contribute to schizophrenia. Length = 303

>gnl|CDD|132947 cd06616, PKc_MKK4, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

 Score = 67.8 bits (166), Expect = 2e-12
 Identities = 65/216 (30%), Positives = 100/216 (46%), Gaps = 29/216 (13%)

Query: 368 EENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGT-RAFLAEISSLGRLKH-KSLVG 425
           +   IG G  G V K + +  G  +AVKRI    D    +  L ++  + R      +V 
Sbjct: 8   DLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDEKEQKRLLMDLDVVMRSSDCPYIVK 67

Query: 426 LRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIR----VLKDVAAGVL-- 479
             G   RE G   +  + M+  SLDK+         +    +      +L  +A   +  
Sbjct: 68  FYGALFRE-GDCWICMELMDI-SLDKF------YKYVYEVLKSVIPEEILGKIAVATVKA 119

Query: 480 --YLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQ--VASTTRVVGTVGY 535
             YL E  E K++HRD+K SN+LLD+  N +L DFG++   G     +A  TR  G   Y
Sbjct: 120 LNYLKE--ELKIIHRDVKPSNILLDRNGNIKLCDFGIS---GQLVDSIAK-TRDAGCRPY 173

Query: 536 LAPE-VFSSGRAS--TQTDVFGFGILILEVLSGRRP 568
           +APE +  S R     ++DV+  GI + EV +G+ P
Sbjct: 174 MAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFP 209

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates the downstream targets, c-Jun N-terminal kinase (JNK) and p38 MAPK, on specific threonine and tyrosine residues. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. Their activation is associated with the induction of cell death. Mice deficient in MKK4 die during embryogenesis and display anemia, severe liver hemorrhage, and abnormal hepatogenesis. MKK4 may also play roles in the immune system and in cardiac hypertrophy. It plays a major role in cancer as a tumor and metastasis suppressor. Under certain conditions, MKK4 is pro-oncogenic. Length = 288

>gnl|CDD|132990 cd06659, STKc_PAK6, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

 Score = 67.7 bits (165), Expect = 2e-12
 Identities = 54/204 (26%), Positives = 97/204 (47%), Gaps = 11/204 (5%)

Query: 372 IGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGL-RGWC 430
           IG G  G V     +  G ++AVK +             E+  +   +H+++V + + + 
Sbjct: 29  IGEGSTGIVCIAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHQNVVEMYKSYL 88

Query: 431 KREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVL 490
             E+  L ++ ++++ G+L   + Q      L+ E+   V + V   + YLH    + V+
Sbjct: 89  VGEE--LWVLMEFLQGGALTDIVSQ----TRLNEEQIATVCESVLQALCYLHS---QGVI 139

Query: 491 HRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQT 550
           HRDIKS ++LL  +   +L DFG         V     +VGT  ++APEV S     T+ 
Sbjct: 140 HRDIKSDSILLTLDGRVKLSDFGFCAQISK-DVPKRKSLVGTPYWMAPEVISRTPYGTEV 198

Query: 551 DVFGFGILILEVLSGRRPIEEGKP 574
           D++  GI+++E++ G  P     P
Sbjct: 199 DIWSLGIMVIEMVDGEPPYFSDSP 222

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role in stress responses through its activation by the mitogen-activated protein kinase (MAPK) p38 and MAPK kinase 6 (MKK6) pathway. PAK6 is highly expressed in the brain. It is not required for viability, but together with PAK5, it is required for normal levels of locomotion and activity, and for learning and memory. Increased expression of PAK6 is found in primary and metastatic prostate cancer. PAK6 may play a role in the regulation of motility. Length = 297

>gnl|CDD|173666 cd05575, STKc_SGK, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

 Score = 68.3 bits (167), Expect = 2e-12
 Identities = 74/256 (28%), Positives = 105/256 (41%), Gaps = 31/256 (12%)

Query: 371 VIGVGGNGKVYKGVLEGGGAEIAVKRISHE---NDGGTRAFLAEISSL-GRLKHKSLVGL 426
           VIG G  GKV     +  G   AVK +  +        +  +AE + L   +KH  LVGL
Sbjct: 2   VIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGL 61

Query: 427 RGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLK-DVAAGVLYLHEGW 485
             +  +    L  V DY+  G L    F          E R R    ++A+ + YLH   
Sbjct: 62  H-YSFQTADKLYFVLDYVNGGEL---FFHLQRERSFP-EPRARFYAAEIASALGYLHS-- 114

Query: 486 EKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGR 545
              +++RD+K  N+LLD + +  L DFGL +  G     +T+   GT  YLAPEV     
Sbjct: 115 -LNIIYRDLKPENILLDSQGHVVLTDFGLCK-EGIEHSKTTSTFCGTPEYLAPEVLRKQP 172

Query: 546 ASTQTDVFGFGILILEVLSGRRPIEEG----------------KPNLVEMVWELMVQGKL 589
                D +  G ++ E+L G  P                    KPN+      L+ +G L
Sbjct: 173 YDRTVDWWCLGAVLYEMLYGLPPFYSRDTAEMYDNILNKPLRLKPNISVSARHLL-EGLL 231

Query: 590 LDALDARLRAKGGFDE 605
                 RL AK  F E
Sbjct: 232 QKDRTKRLGAKDDFLE 247

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell proliferation, and apoptosis. Length = 323

>gnl|CDD|173685 cd05594, STKc_PKB_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha

 Score = 68.1 bits (166), Expect = 2e-12
 Identities = 50/161 (31%), Positives = 78/161 (48%), Gaps = 9/161 (5%)

Query: 409 LAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERI 468
           L E   L   +H  L  L+ +  +    L  V +Y   G L    F      + S E+R 
Sbjct: 43  LTENRVLQNSRHPFLTALK-YSFQTHDRLCFVMEYANGGEL---FFHLSRERVFS-EDRA 97

Query: 469 RVL-KDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTT 527
           R    ++ + + YLH   EK V++RD+K  N++LDK+ + ++ DFGL +  G    A+  
Sbjct: 98  RFYGAEIVSALDYLHS--EKNVVYRDLKLENLMLDKDGHIKITDFGLCK-EGIKDGATMK 154

Query: 528 RVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRP 568
              GT  YLAPEV          D +G G+++ E++ GR P
Sbjct: 155 TFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 195

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficient in PKB-alpha exhibit perinatal morbidity, growth retardation, reduction in body weight accompanied by reduced sizes of multiple organs, and enhanced apoptosis in some cell types. PKB-alpha activity has been reported to be frequently elevated in breast and prostate cancers. In some cancer cells, PKB-alpha may act as a suppressor of metastasis. Length = 325

>gnl|CDD|173764 cd08224, STKc_Nek6_Nek7, Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

 Score = 67.5 bits (165), Expect = 3e-12
 Identities = 71/285 (24%), Positives = 121/285 (42%), Gaps = 36/285 (12%)

Query: 363 TKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRIS--HENDGGTRA-FLAEISSLGRLK 419
              F  E  IG G    VYK +    G  +A+K++      D   R   L EI  L +L 
Sbjct: 1   LGNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLD 60

Query: 420 HKSLVG-LRGWCKREKGSLMLVYDYMENGSLDKWI--FQCDGSMMLSCEERI--RVLKDV 474
           H +++  L  +   E   L +V +  + G L + I  F+    ++    ER   +    +
Sbjct: 61  HPNVIKYLASFI--ENNELNIVLELADAGDLSRMIKHFKKQKRLI---PERTIWKYFVQL 115

Query: 475 AAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRVVGTVG 534
            + + ++H    K+++HRDIK +NV +      +LGD GL R       A+ + +VGT  
Sbjct: 116 CSALEHMHS---KRIMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHS-LVGTPY 171

Query: 535 YLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKL----L 590
           Y++PE       + ++D++  G L+ E+ + + P    K NL   + + + +        
Sbjct: 172 YMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYS-LCKKIEKCDYPPLPA 230

Query: 591 DALDARLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKV 635
           D     LR               L   C  PDP  RP +  V++V
Sbjct: 231 DHYSEELR--------------DLVSRCINPDPEKRPDISYVLQV 261

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may also be regulators of the p70 ribosomal S6 kinase. Length = 267

>gnl|CDD|133186 cd05055, PTKc_PDGFR, Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

 Score = 67.9 bits (166), Expect = 3e-12
 Identities = 72/279 (25%), Positives = 124/279 (44%), Gaps = 33/279 (11%)

Query: 371 VIGVGGNGKVYKGVLEGGGAE-----IAVKRISHENDGGTR-AFLAEISSLGRL-KHKSL 423
            +G G  GKV +    G         +AVK +        R A ++E+  +  L  H+++
Sbjct: 42  TLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHLGNHENI 101

Query: 424 VGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHE 483
           V L G C    G ++++ +Y   G L  ++ +      L+ E+ +     VA G+ +L  
Sbjct: 102 VNLLGACTI-GGPILVITEYCCYGDLLNFLRR-KRESFLTLEDLLSFSYQVAKGMAFLAS 159

Query: 484 GWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLAR--MHGHGQVA-STTRVVGTVGYLAPEV 540
              K  +HRD+ + NVLL      ++ DFGLAR  M+    V     R+   V ++APE 
Sbjct: 160 ---KNCIHRDLAARNVLLTHGKIVKICDFGLARDIMNDSNYVVKGNARL--PVKWMAPES 214

Query: 541 FSSGRASTQTDVFGFGILILEVLS-GRRPIEEGKPNLVEMVWELMVQGKLLDALDARLR- 598
             +   + ++DV+ +GIL+ E+ S G  P     P        + V  K    +    R 
Sbjct: 215 IFNCVYTFESDVWSYGILLWEIFSLGSNPY----PG-------MPVDSKFYKLIKEGYRM 263

Query: 599 AKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLE 637
           A+      E+  ++     C   DP  RPT +Q+V+++ 
Sbjct: 264 AQPEHAPAEIYDIMK---TCWDADPLKRPTFKQIVQLIG 299

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR subfamily receptors are important in the development of a variety of cells. PDGFRs are expressed in a many cells including fibroblasts, neurons, endometrial cells, mammary epithelial cells, and vascular smooth muscle cells. PDGFR signaling is critical in normal embryonic development, angiogenesis, and wound healing. PDGFRs transduce mitogenic signals for connective tissue cells and are important for cell shape and motility. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem cells, the interstitial cells of Cajal, and the pacemaker cells of the GI tract. CSF-1R signaling is critical in the regulation of macrophages and osteoclasts. Mammalian FLT3 plays an important role in the survival, proliferation, and differentiation of stem cells. Length = 302

>gnl|CDD|173747 cd07852, STKc_MAPK15, Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

 Score = 68.0 bits (167), Expect = 4e-12
 Identities = 64/215 (29%), Positives = 95/215 (44%), Gaps = 39/215 (18%)

Query: 372 IGVGGNGKVYKGVLEGGGAEIAVKRI----SHENDGGTRAFLAEISSLGRLK-HKSLVGL 426
           +G G  G V+K +       +A+K+I     +  D   R F  EI  L  L  H ++V L
Sbjct: 15  LGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDA-QRTF-REIMFLQELGDHPNIVKL 72

Query: 427 RGWCKREKGS-LMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDV---------AA 476
               K E    + LV++YME   L   I             R  +L+DV           
Sbjct: 73  LNVIKAENDKDIYLVFEYMET-DLHAVI-------------RANILEDVHKRYIMYQLLK 118

Query: 477 GVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVAST----TRVVGT 532
            + Y+H G    V+HRD+K SN+LL+ +   +L DFGLAR     +        T  V T
Sbjct: 119 ALKYIHSG---NVIHRDLKPSNILLNSDCRVKLADFGLARSLSELEENPENPVLTDYVAT 175

Query: 533 VGYLAPEV-FSSGRASTQTDVFGFGILILEVLSGR 566
             Y APE+   S R +   D++  G ++ E+L G+
Sbjct: 176 RWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGK 210

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimuli whereas ERK8 shows low basal activity and is activated by DNA-damaging agents. ERK7 and ERK8 also have different substrate profiles. Genome analysis shows that they are orthologs with similar gene structures. ERK7 and ERK 8 may be involved in the signaling of some nuclear receptor transcription factors. ERK7 regulates hormone-dependent degradation of estrogen receptor alpha while ERK8 down-regulates the transcriptional co-activation androgen and glucocorticoid receptors. Length = 337

>gnl|CDD|143368 cd07863, STKc_CDK4, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

 Score = 67.3 bits (164), Expect = 4e-12
 Identities = 60/208 (28%), Positives = 105/208 (50%), Gaps = 19/208 (9%)

Query: 372 IGVGGNGKVYKGVLEGGGAEIAVK--RISHENDGGTRAFLAEISSLGRLK---HKSLVGL 426
           IGVG  G VYK      G  +A+K  R+    DG   + + E++ L RL+   H ++V L
Sbjct: 8   IGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRL 67

Query: 427 RGWCKREKG----SLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIR-VLKDVAAGVLYL 481
              C   +      + LV+++++   L  ++ +     + +  E I+ +++    G+ +L
Sbjct: 68  MDVCATSRTDRETKVTLVFEHVDQ-DLRTYLDKVPPPGLPA--ETIKDLMRQFLRGLDFL 124

Query: 482 HEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVF 541
           H      ++HRD+K  N+L+      +L DFGLAR++   Q+A T  VV T+ Y APEV 
Sbjct: 125 HA---NCIVHRDLKPENILVTSGGQVKLADFGLARIYSC-QMALTPVVV-TLWYRAPEVL 179

Query: 542 SSGRASTQTDVFGFGILILEVLSGRRPI 569
                +T  D++  G +  E+   R+P+
Sbjct: 180 LQSTYATPVDMWSVGCIFAEMFR-RKPL 206

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the nucleus. CDK4 also shows kinase activity towards Smad3, a signal transducer of transforming growth factor (TGF)-beta signaling which modulates transcription and plays a role in cell proliferation and apoptosis. CDK4 is inhibited by the p21 inhibitor and is specifically mutated in human melanoma. Length = 288

>gnl|CDD|133221 cd05090, PTKc_Ror1, Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

 Score = 66.6 bits (162), Expect = 6e-12
 Identities = 56/224 (25%), Positives = 113/224 (50%), Gaps = 27/224 (12%)

Query: 366 FSEENVIGVGGNGKVYKGVLEGGGAE----IAVKRISHENDGGTRA-FLAEISSLGRLKH 420
           F EE  +G    GK+YKG L   G +    +A+K +   N+      F  E S +  L H
Sbjct: 9   FMEE--LGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAELHH 66

Query: 421 KSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQ--------C----DGSMMLSCE--E 466
            ++V L G   +E+   ML ++Y+  G L +++          C    DG++  S +  +
Sbjct: 67  PNIVCLLGVVTQEQPVCML-FEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGD 125

Query: 467 RIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLAR-MHGHGQVAS 525
            + +   +AAG+ YL   +    +H+D+ + N+L+ ++++ ++ D GL+R ++       
Sbjct: 126 FLHIAIQIAAGMEYLSSHF---FVHKDLAARNILIGEQLHVKISDLGLSREIYSADYYRV 182

Query: 526 TTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLS-GRRP 568
             + +  + ++ PE    G+ S+ +D++ FG+++ E+ S G +P
Sbjct: 183 QPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQP 226

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror kinases are expressed in many tissues during development. Avian Ror1 was found to be involved in late limb development. Studies in mice reveal that Ror1 is important in the regulation of neurite growth in central neurons, as well as in respiratory development. Loss of Ror1 also enhances the heart and skeletal abnormalities found in Ror2-deficient mice. Length = 283

>gnl|CDD|173703 cd05612, STKc_PRKX_like, Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

 Score = 66.7 bits (163), Expect = 6e-12
 Identities = 53/184 (28%), Positives = 87/184 (47%), Gaps = 24/184 (13%)

Query: 411 EISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWI-----FQCDGSMMLSCE 465
           E   L  + H  ++ L  W + ++  L ++ +Y+  G L  ++     F     +  + E
Sbjct: 51  EKRVLKEVSHPFIIRLF-WTEHDQRFLYMLMEYVPGGELFSYLRNSGRFSNSTGLFYASE 109

Query: 466 ERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVAS 525
                   +   + YLH    K++++RD+K  N+LLDKE + +L DFG A+         
Sbjct: 110 --------IVCALEYLHS---KEIVYRDLKPENILLDKEGHIKLTDFGFAKK----LRDR 154

Query: 526 TTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMV 585
           T  + GT  YLAPEV  S   +   D +  GILI E+L G  P  +  P     ++E ++
Sbjct: 155 TWTLCGTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVGYPPFFDDNPF---GIYEKIL 211

Query: 586 QGKL 589
            GKL
Sbjct: 212 AGKL 215

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyte/macrophage lineage differentiation, renal cell epithelial migration, and tubular morphogenesis in the developing kidney. Length = 291

>gnl|CDD|173768 cd08228, STKc_Nek6, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

 Score = 66.2 bits (161), Expect = 6e-12
 Identities = 68/275 (24%), Positives = 120/275 (43%), Gaps = 22/275 (8%)

Query: 366 FSEENVIGVGGNGKVYKGVLEGGGAEIAVKRIS--HENDGGTRA-FLAEISSLGRLKHKS 422
           F  E  IG G   +VY+         +A+K++      D   R   + EI  L +L H +
Sbjct: 4   FQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPN 63

Query: 423 LVG-LRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERI-RVLKDVAAGVLY 480
           ++  L  +   E   L +V +  + G L + I        L  E  + +    + + V +
Sbjct: 64  VIKYLDSFI--EDNELNIVLELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEH 121

Query: 481 LHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEV 540
           +H    ++V+HRDIK +NV +      +LGD GL R       A+ + +VGT  Y++PE 
Sbjct: 122 MHS---RRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHS-LVGTPYYMSPER 177

Query: 541 FSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRAK 600
                 + ++D++  G L+ E+ + + P    K NL  +  +       ++  D      
Sbjct: 178 IHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLFSLCQK-------IEQCDYPPLPT 230

Query: 601 GGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKV 635
               E   E++  L  +C YPDP  RP +  V ++
Sbjct: 231 ----EHYSEKLRELVSMCIYPDPDQRPDIGYVHQI 261

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase and anaphase, and to the midbody during cytokinesis. Length = 267

>gnl|CDD|183880 PRK13184, pknD, serine/threonine-protein kinase; Reviewed

 Score = 68.6 bits (168), Expect = 7e-12
 Identities = 56/226 (24%), Positives = 94/226 (41%), Gaps = 34/226 (15%)

Query: 372 IGVGGNGKVYKGVLEGGGAEIAVKRISH---ENDGGTRAFLAEISSLGRLKHKSLVGLRG 428
           IG GG G+VY          +A+K+I     EN    + FL E      L H  +V +  
Sbjct: 10  IGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYS 69

Query: 429 WCKREKGSLMLVYDYMENGSLD---KWIFQCDGSMMLSCEER------IRVLKDVAAGVL 479
            C  +   +     Y+E  +L    K ++Q + S+     E+      + +   + A + 
Sbjct: 70  ICS-DGDPVYYTMPYIEGYTLKSLLKSVWQKE-SLSKELAEKTSVGAFLSIFHKICATIE 127

Query: 480 YLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHG-----------------HGQ 522
           Y+H    K VLHRD+K  N+LL       + D+G A                     +  
Sbjct: 128 YVHS---KGVLHRDLKPDNILLGLFGEVVILDWGAAIFKKLEEEDLLDIDVDERNICYSS 184

Query: 523 VASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRP 568
           +    ++VGT  Y+APE      AS  TD++  G+++ ++L+   P
Sbjct: 185 MTIPGKIVGTPDYMAPERLLGVPASESTDIYALGVILYQMLTLSFP 230

Length = 932

>gnl|CDD|240344 PTZ00283, PTZ00283, serine/threonine protein kinase; Provisional

 Score = 68.0 bits (166), Expect = 7e-12
 Identities = 46/141 (32%), Positives = 72/141 (51%), Gaps = 19/141 (13%)

Query: 439 LVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYL------HEGWEKKVLHR 492
           LV DY   G L + I         S  +  R  ++  AG+L++      H    K ++HR
Sbjct: 116 LVLDYANAGDLRQEI--------KSRAKTNRTFREHEAGLLFIQVLLAVHHVHSKHMIHR 167

Query: 493 DIKSSNVLLDKEMNGRLGDFGLARMHGH---GQVASTTRVVGTVGYLAPEVFSSGRASTQ 549
           DIKS+N+LL      +LGDFG ++M+       V  T    GT  Y+APE++     S +
Sbjct: 168 DIKSANILLCSNGLVKLGDFGFSKMYAATVSDDVGRT--FCGTPYYVAPEIWRRKPYSKK 225

Query: 550 TDVFGFGILILEVLSGRRPIE 570
            D+F  G+L+ E+L+ +RP +
Sbjct: 226 ADMFSLGVLLYELLTLKRPFD 246

Length = 496

>gnl|CDD|173656 cd05111, PTK_HER3, Pseudokinase domain of the Protein Tyrosine Kinase, HER3

 Score = 65.7 bits (160), Expect = 1e-11
 Identities = 60/221 (27%), Positives = 106/221 (47%), Gaps = 22/221 (9%)

Query: 371 VIGVGGNGKVYKGVL--EGGGAEIAVKRISHENDGGTRAFLA---EISSLGRLKHKSLVG 425
           ++G G  G V+KG+   EG   +I V   + ++  G + F      + ++G L H  +V 
Sbjct: 14  LLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSGRQTFQEITDHMLAMGSLDHAYIVR 73

Query: 426 LRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGW 485
           L G C     SL LV      GSL   + Q   S  L  +  +     +A G+ YL E  
Sbjct: 74  LLGICP--GASLQLVTQLSPLGSLLDHVRQHRDS--LDPQRLLNWCVQIAKGMYYLEE-- 127

Query: 486 EKKVLHRDIKSSNVLLDKEMNGRLGDFGLAR-MHGHGQVASTTRVVGTVGYLAPEVFSSG 544
             +++HR++ + N+LL  +   ++ DFG+A  ++   +    +     + ++A E    G
Sbjct: 128 -HRMVHRNLAARNILLKSDSIVQIADFGVADLLYPDDKKYFYSEHKTPIKWMALESILFG 186

Query: 545 RASTQTDVFGFGILILEVLS-------GRRPIEEGKPNLVE 578
           R + Q+DV+ +G+ + E++S       G RP E   P+L+E
Sbjct: 187 RYTHQSDVWSYGVTVWEMMSYGAEPYAGMRPHE--VPDLLE 225

Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. HER3 binds the neuregulin ligands, NRG1 and NRG2. HER3 contains an impaired tyr kinase domain and relies on its heterodimerization partners for activity following ligand binding. The HER2-HER3 heterodimer constitutes a high affinity co-receptor capable of potent mitogenic signaling. HER3 participates in a signaling pathway involved in the proliferation, survival, adhesion, and motility of tumor cells. Length = 279

>gnl|CDD|173670 cd05579, STKc_MAST_like, Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

 Score = 65.7 bits (161), Expect = 1e-11
 Identities = 55/208 (26%), Positives = 94/208 (45%), Gaps = 19/208 (9%)

Query: 372 IGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAF---LAEISSLGRLKHKSLVGLRG 428
           I  G  G+V+    +  G   A+K I   +          L E   L + +   +V L  
Sbjct: 1   ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLY- 59

Query: 429 WCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRV-LKDVAAGVLYLHEGWEK 487
           +  + K +L LV +Y+  G L   + +  GS+    E+  R+ + ++   + YLH     
Sbjct: 60  YSFQGKKNLYLVMEYLPGGDL-ASLLENVGSLD---EDVARIYIAEIVLALEYLHS---N 112

Query: 488 KVLHRDIKSSNVLLDKEMNGRLGDFGLARM-------HGHGQVASTTRVVGTVGYLAPEV 540
            ++HRD+K  N+L+D   + +L DFGL+++       + +       R+VGT  Y+APEV
Sbjct: 113 GIIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVRRQINLNDDEKEDKRIVGTPDYIAPEV 172

Query: 541 FSSGRASTQTDVFGFGILILEVLSGRRP 568
                 S   D +  G ++ E L G  P
Sbjct: 173 ILGQGHSKTVDWWSLGCILYEFLVGIPP 200

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert relative to other kinases. The fungal kinases in this subfamily harbor other domains in addition to a central catalytic domain, which also contains an insert relative to MAST kinases like MASTL. Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. MAST kinases are cytoskeletal associated kinases of unknown function that are also expressed at neuromuscular junctions and postsynaptic densities. The fungal proteins Rim15 and cek1 are involved in the regulation of meiosis and mitosis, respectively. Length = 265

>gnl|CDD|173683 cd05592, STKc_nPKC_theta_delta, Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

 Score = 66.4 bits (162), Expect = 1e-11
 Identities = 59/204 (28%), Positives = 100/204 (49%), Gaps = 16/204 (7%)

Query: 371 VIGVGGNGKVYKGVLEGGGAEIAVKRISHE---NDGGTRAFLAEISSLG-RLKHKSLVGL 426
           V+G G  GKV    L+G     A+K +  +    D      + E   L    +H  L  L
Sbjct: 2   VLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHL 61

Query: 427 RGWCK-REKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLK-DVAAGVLYLHEG 484
             +C  + K  L  V +Y+  G L   +F    S     E R R    ++  G+ +LH+ 
Sbjct: 62  --FCTFQTKEHLFFVMEYLNGGDL---MFHIQSSGRFD-EARARFYAAEIICGLQFLHKK 115

Query: 485 WEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSG 544
               +++RD+K  NVLLDK+ + ++ DFG+ + + +G+  ++T   GT  Y+APE+    
Sbjct: 116 G---IIYRDLKLDNVLLDKDGHIKIADFGMCKENMNGEGKAST-FCGTPDYIAPEILKGQ 171

Query: 545 RASTQTDVFGFGILILEVLSGRRP 568
           + +   D + FG+L+ E+L G+ P
Sbjct: 172 KYNESVDWWSFGVLLYEMLIGQSP 195

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in several aspects of T-cell biology. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. Length = 316

>gnl|CDD|133227 cd05096, PTKc_DDR1, Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1

 Score = 66.1 bits (161), Expect = 1e-11
 Identities = 49/191 (25%), Positives = 91/191 (47%), Gaps = 22/191 (11%)

Query: 392 IAVKRISHENDGGTRA-FLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLD 450
           +AVK +  + +   R  FL E+  L RLK  +++ L G C  E   L ++ +YMENG L+
Sbjct: 49  VAVKILRPDANKNARNDFLKEVKILSRLKDPNIIRLLGVCVDED-PLCMITEYMENGDLN 107

Query: 451 KWI----------------FQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDI 494
           +++                        +S    + V   +A+G+ YL        +HRD+
Sbjct: 108 QFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSS---LNFVHRDL 164

Query: 495 KSSNVLLDKEMNGRLGDFGLAR-MHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVF 553
            + N L+ + +  ++ DFG++R ++         R V  + ++A E    G+ +T +DV+
Sbjct: 165 ATRNCLVGENLTIKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWECILMGKFTTASDVW 224

Query: 554 GFGILILEVLS 564
            FG+ + E+L 
Sbjct: 225 AFGVTLWEILM 235

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in keratinocytes, colonic mucosa epithelium, lung epithelium, thyroid follicles, and the islets of Langerhans. During embryonic development, it is found in the developing neuroectoderm. DDR1 is a key regulator of cell morphogenesis, differentiation and proliferation. It is important in the development of the mammary gland, the vasculator and the kidney. DDR1 is also found in human leukocytes, where it facilitates cell adhesion, migration, maturation, and cytokine production. Length = 304

>gnl|CDD|173644 cd05079, PTKc_Jak1_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1

 Score = 65.7 bits (160), Expect = 1e-11
 Identities = 54/201 (26%), Positives = 104/201 (51%), Gaps = 13/201 (6%)

Query: 372 IGVGGNGKV----YKGVLEGGGAEIAVKRISHENDGGTRAFL-AEISSLGRLKHKSLVGL 426
           +G G  GKV    Y    +  G ++AVK +  E+ G   A L  EI  L  L H+++V  
Sbjct: 12  LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 71

Query: 427 RGWCKREKG-SLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGW 485
           +G C  + G  + L+ +++ +GSL +++ +    + L  +++++    +  G+ YL    
Sbjct: 72  KGICTEDGGNGIKLIMEFLPSGSLKEYLPRNKNKINL--KQQLKYAVQICKGMDYLGS-- 127

Query: 486 EKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTR--VVGTVGYLAPEVFSS 543
            ++ +HRD+ + NVL++ E   ++GDFGL +     +   T +  +   V + APE    
Sbjct: 128 -RQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEYYTVKDDLDSPVFWYAPECLIQ 186

Query: 544 GRASTQTDVFGFGILILEVLS 564
            +    +DV+ FG+ + E+L+
Sbjct: 187 SKFYIASDVWSFGVTLYELLT 207

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak1 is widely expressed in many tissues. Many cytokines are dependent on Jak1 for signaling, including those that use the shared receptor subunits common gamma chain (IL-2, IL-4, IL-7, IL-9, IL-15, IL-21) and gp130 (IL-6, IL-11, oncostatin M, G-CSF, and IFNs, among others). The many varied interactions of Jak1 and its ubiquitous expression suggest many biological roles. Jak1 is important in neurological development, as well as in lymphoid development and function. It also plays a role in the pathophysiology of cardiac hypertrophy and heart failure. A mutation in the ATP-binding site of Jak1 was identified in a human uterine leiomyosarcoma cell line, resulting in defective cytokine induction and antigen presentation, thus allowing the tumor to evade the immune system. Length = 284

>gnl|CDD|133193 cd05062, PTKc_IGF-1R, Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor

 Score = 65.4 bits (159), Expect = 1e-11
 Identities = 61/280 (21%), Positives = 129/280 (46%), Gaps = 31/280 (11%)

Query: 372 IGVGGNGKVYKGVLEG-----GGAEIAVKRISHENDGGTR-AFLAEISSLGRLKHKSLVG 425
           +G G  G VY+G+ +G         +A+K ++       R  FL E S +       +V 
Sbjct: 14  LGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 73

Query: 426 LRGWCKREKGSLMLVYDYMENGSLDKWIFQC-------DGSMMLSCEERIRVLKDVAAGV 478
           L G   + + +L+++ + M  G L  ++                S ++ I++  ++A G+
Sbjct: 74  LLGVVSQGQPTLVIM-ELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGM 132

Query: 479 LYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLAR-MHGHGQVASTTRVVGTVGYLA 537
            YL+     K +HRD+ + N ++ ++   ++GDFG+ R ++         + +  V +++
Sbjct: 133 AYLNA---NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMS 189

Query: 538 PEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDARL 597
           PE    G  +T +DV+ FG+++ E+ +      +G  N  E V   +++G LLD  D   
Sbjct: 190 PESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGMSN--EQVLRFVMEGGLLDKPD--- 244

Query: 598 RAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLE 637
                   +  + +  L  +C   +P+ RP+  +++  ++
Sbjct: 245 --------NCPDMLFELMRMCWQYNPKMRPSFLEIISSIK 276

Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, where it is frequently overexpressed, IGF-1R is implicated in proliferation, the suppression of apoptosis, invasion, and metastasis. IGF-1R is being developed as a therapeutic target in cancer treatment. Length = 277

>gnl|CDD|173710 cd05620, STKc_nPKC_delta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

 Score = 65.7 bits (160), Expect = 1e-11
 Identities = 53/206 (25%), Positives = 92/206 (44%), Gaps = 20/206 (9%)

Query: 371 VIGVGGNGKVYKGVLEGGGAEIAVKRISHEN---DGGTRAFLAEISSLGRLKHKSLVGLR 427
           V+G G  GKV    L+G G   AVK +  +    D      + E   L        +   
Sbjct: 2   VLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHL 61

Query: 428 GWCKREKGSLMLVYDYMENGSL-----DKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLH 482
               + K  L  V +++  G L     DK  F    +   + E        +  G+ +LH
Sbjct: 62  YCTFQTKEHLFFVMEFLNGGDLMFHIQDKGRFDLYRATFYAAE--------IVCGLQFLH 113

Query: 483 EGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFS 542
                 +++RD+K  NV+LD++ + ++ DFG+ + +  G   ++T   GT  Y+APE+  
Sbjct: 114 SKG---IIYRDLKLDNVMLDRDGHIKIADFGMCKENVFGDNRAST-FCGTPDYIAPEILQ 169

Query: 543 SGRASTQTDVFGFGILILEVLSGRRP 568
             + +   D + FG+L+ E+L G+ P
Sbjct: 170 GLKYTFSVDWWSFGVLLYEMLIGQSP 195

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. It slows down cell proliferation, inducing cell cycle arrest and enhancing cell differentiation. PKC-delta is also involved in the regulation of transcription as well as immune and inflammatory responses. It plays a central role in the genotoxic stress response that leads to DNA damaged-induced apoptosis. Length = 316

>gnl|CDD|133172 cd05040, PTKc_Ack_like, Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

 Score = 64.7 bits (158), Expect = 2e-11
 Identities = 57/208 (27%), Positives = 95/208 (45%), Gaps = 21/208 (10%)

Query: 372 IGVGGNGKVYKGVLEGGGAE---IAVKRISHENDGGTRA-FLAEISSLGRLKHKSLVGLR 427
           +G G  G V +G     G +   +AVK +  +        FL E + +  L H++L+ L 
Sbjct: 3   LGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDHENLIRLY 62

Query: 428 GWCKREKGSLMLVYDYMENGSL-DKWIFQCDGSMMLS--CEERIRVLKDVAAGVLYLHEG 484
           G        LM+V +    GSL D+      G  ++S  C+  +++    A G+ YL   
Sbjct: 63  GVVLTH--PLMMVTELAPLGSLLDRLRKDALGHFLISTLCDYAVQI----ANGMRYLES- 115

Query: 485 WEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQ---VASTTRVVGTVGYLAPEVF 541
             K+ +HRD+ + N+LL  +   ++GDFGL R     +   V      V    + APE  
Sbjct: 116 --KRFIHRDLAARNILLASDDKVKIGDFGLMRALPQNEDHYVMEEHLKV-PFAWCAPESL 172

Query: 542 SSGRASTQTDVFGFGILILEVLS-GRRP 568
            +   S  +DV+ FG+ + E+ + G  P
Sbjct: 173 RTRTFSHASDVWMFGVTLWEMFTYGEEP 200

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with androgen-independent prostate cancer progression. Tnk1 regulates TNFalpha signaling and may play an important role in cell death. Length = 257

>gnl|CDD|143342 cd07837, STKc_CdkB_plant, Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

 Score = 65.2 bits (159), Expect = 2e-11
 Identities = 59/206 (28%), Positives = 92/206 (44%), Gaps = 18/206 (8%)

Query: 372 IGVGGNGKVYKGVLEGGGAEIAVK--RISHENDGGTRAFLAEISSLGRLKHKSLVGLRGW 429
           IG G  GKVYK   +  G  +A+K  R+  + +G     L EIS L  L     + +R  
Sbjct: 9   IGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYI-VRLL 67

Query: 430 C------KREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERI--RVLKDVAAGVLYL 481
                  K  K SL LV++Y+++  L K++             +     +  +  GV + 
Sbjct: 68  DVEHVEEKNGKPSLYLVFEYLDS-DLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHC 126

Query: 482 HEGWEKKVLHRDIKSSNVLLDKEMNG-RLGDFGLARMHGHGQVASTTRVVGTVGYLAPEV 540
           H+     V+HRD+K  N+L+DK+    ++ D GL R      V S T  + T+ Y APEV
Sbjct: 127 HK---HGVMHRDLKPQNLLVDKQKGLLKIADLGLGRAFSI-PVKSYTHEIVTLWYRAPEV 182

Query: 541 FSSGRA-STQTDVFGFGILILEVLSG 565
                  ST  D++  G +  E+   
Sbjct: 183 LLGSTHYSTPVDIWSVGCIFAEMSRK 208

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developmental pathways, such as stomata and leaf development. CdkB has been shown to associate with both cyclin B, which controls G2/M transition, and cyclin D, which acts as a mediator in linking extracellular signals to the cell cycle. Length = 295

>gnl|CDD|132974 cd06643, STKc_SLK, Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

 Score = 65.0 bits (158), Expect = 2e-11
 Identities = 60/216 (27%), Positives = 101/216 (46%), Gaps = 28/216 (12%)

Query: 372 IGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCK 431
           +G G  GKVYK   +  G   A K I  +++     ++ EI  L    H ++V L     
Sbjct: 13  LGDGAFGKVYKAQNKETGVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 72

Query: 432 REKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVL-KDVAAGVLYLHEGWEKKVL 490
            E  +L ++ ++   G++D  + + +  +    E +IRV+ K     + YLHE    K++
Sbjct: 73  YEN-NLWILIEFCAGGAVDAVMLELERPLT---EPQIRVVCKQTLEALNYLHE---NKII 125

Query: 491 HRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRV-------VGTVGYLAPEVF-- 541
           HRD+K+ N+L   + + +L DFG++        A  TR        +GT  ++APEV   
Sbjct: 126 HRDLKAGNILFTLDGDIKLADFGVS--------AKNTRTIQRRDSFIGTPYWMAPEVVMC 177

Query: 542 --SSGRA-STQTDVFGFGILILEVLSGRRPIEEGKP 574
             S  R    + DV+  GI ++E+     P  E  P
Sbjct: 178 ETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELNP 213

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration. Length = 282

>gnl|CDD|173647 cd05091, PTKc_Ror2, Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2

 Score = 65.1 bits (158), Expect = 2e-11
 Identities = 62/235 (26%), Positives = 113/235 (48%), Gaps = 33/235 (14%)

Query: 358 EIEAATKGFSEENVIGVGGNGKVYKGVLEGGG-----AEIAVKRISHENDGGTRA-FLAE 411
           EI  +T  F EE  +G    GKVYKG L G         +A+K +  + +G  R  F  E
Sbjct: 1   EINLSTVRFMEE--LGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHE 58

Query: 412 ISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCD-----GSM------ 460
                RL+H ++V L G   +E+  L +++ Y  +  L +++         GS       
Sbjct: 59  AMMRSRLQHPNIVCLLGVVTKEQ-PLSMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTV 117

Query: 461 --MLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMH 518
              L   + + ++  +AAG+ +L       V+H+D+ + NVL+  ++N ++ D GL R  
Sbjct: 118 KSTLEPADFVHIVTQIAAGMEFLSS---HHVVHKDLATRNVLVFDKLNVKISDLGLFR-- 172

Query: 519 GHGQVASTTRVVGT----VGYLAPEVFSSGRASTQTDVFGFGILILEVLS-GRRP 568
                A   +++G     + +++PE    G+ S  +D++ +G+++ EV S G +P
Sbjct: 173 -EVYAADYYKLMGNSLLPIRWMSPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQP 226

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror2 plays important roles in skeletal and heart formation. Ror2-deficient mice show widespread bone abnormalities, ventricular defects in the heart, and respiratory dysfunction. Mutations in human Ror2 result in two different bone development genetic disorders, recessive Robinow syndrome and brachydactyly type B. Ror2 is also implicated in neural development. Length = 283

>gnl|CDD|140293 PTZ00267, PTZ00267, NIMA-related protein kinase; Provisional

 Score = 66.2 bits (161), Expect = 2e-11
 Identities = 44/143 (30%), Positives = 76/143 (53%), Gaps = 19/143 (13%)

Query: 437 LMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLY------LHEGWEKKVL 490
           L+L+ +Y   G L+K I Q         +E +   ++   G+L+      L E   +K++
Sbjct: 140 LLLIMEYGSGGDLNKQIKQ-------RLKEHLP-FQEYEVGLLFYQIVLALDEVHSRKMM 191

Query: 491 HRDIKSSNVLLDKEMNGRLGDFGLARMHGHG---QVASTTRVVGTVGYLAPEVFSSGRAS 547
           HRD+KS+N+ L      +LGDFG ++ +       VAS+    GT  YLAPE++   R S
Sbjct: 192 HRDLKSANIFLMPTGIIKLGDFGFSKQYSDSVSLDVASS--FCGTPYYLAPELWERKRYS 249

Query: 548 TQTDVFGFGILILEVLSGRRPIE 570
            + D++  G+++ E+L+  RP +
Sbjct: 250 KKADMWSLGVILYELLTLHRPFK 272

Length = 478

>gnl|CDD|133178 cd05046, PTK_CCK4, Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

 Score = 64.8 bits (158), Expect = 2e-11
 Identities = 65/292 (22%), Positives = 118/292 (40%), Gaps = 42/292 (14%)

Query: 365 GFSEENVIGVGGNGKVYKG-----VLEGGGAEIAVKRISHENDGGTR-AFLAEISSLGRL 418
              E   +G G  G+V+         EGG   + VK +    D   +  F  E+    +L
Sbjct: 6   NLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKL 65

Query: 419 KHKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWI------FQCDGSMMLSCEERIRVLK 472
            HK++V L G C RE     ++ +Y + G L +++       +      LS ++++ +  
Sbjct: 66  SHKNVVRLLGLC-REAEPHYMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCT 124

Query: 473 DVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLAR------MHGHGQVAST 526
            +A G+ +L      + +HRD+ + N L+  +   ++    L++       +        
Sbjct: 125 QIALGMDHLSNA---RFVHRDLAARNCLVSSQREVKVSLLSLSKDVYNSEYYKLRNALIP 181

Query: 527 TRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLS-GRRPIEEGKPNLVEMVWELMV 585
            R      +LAPE       ST++DV+ FG+L+ EV + G  P          +  E ++
Sbjct: 182 LR------WLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQGELPFY-------GLSDEEVL 228

Query: 586 QGKLLDALDARLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLE 637
               L A    L       E    R+  L   C   +P+ RP+  ++V  L 
Sbjct: 229 NR--LQAGKLELPVP----EGCPSRLYKLMTRCWAVNPKDRPSFSELVSALG 274

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is still unknown. Other pseudokinases such as HER3 rely on the activity of partner RTKs. Length = 275

>gnl|CDD|133174 cd05042, PTKc_Aatyk, Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases

 Score = 64.1 bits (156), Expect = 3e-11
 Identities = 63/279 (22%), Positives = 121/279 (43%), Gaps = 28/279 (10%)

Query: 372 IGVGGNGKVYKGVLEGG--GAEIAVKRI-SHENDGGTRAFLAEISSLGRLKHKSLVGLRG 428
           IG G  GKV  G    G   A + VK + +         FL E+     L H +++   G
Sbjct: 3   IGNGWFGKVLLGEAHRGMSKARVVVKELRASATPDEQLLFLQEVQPYRELNHPNVLQCLG 62

Query: 429 WCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERI--RVLKDVAAGVLYLHEGWE 486
            C  E    +LV ++   G L  ++    G +    ++ +  R+  +VA+G+L+LH+   
Sbjct: 63  QCI-ESIPYLLVLEFCPLGDLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQA-- 119

Query: 487 KKVLHRDIKSSNVLLDKEMNGRLGDFGLA-RMHGHGQVASTTRVVGTVGYLAPEVFSS-- 543
              +H D+   N  L  +++ ++GD+GLA   +      +       + +LAPE+     
Sbjct: 120 -DFIHSDLALRNCQLTADLSVKIGDYGLALEQYPEDYYITKDCHAVPLRWLAPELVEIRG 178

Query: 544 -----GRASTQTDVFGFGILILEVLS-GRRPIEEGKPNLVEMVWELMVQGKLLDALDARL 597
                   + +++++  G+ + E+ +   +P     P+L     +  V  +++   D +L
Sbjct: 179 QDLLPKDQTKKSNIWSLGVTMWELFTAADQPY----PDLS----DEQVLKQVVREQDIKL 230

Query: 598 RAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVL 636
             K   D    +R   +   C + DP  RPT  +V ++L
Sbjct: 231 -PKPQLDLKYSDRWYEVMQFC-WLDPETRPTAEEVHELL 267

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kinases based on overall sequence similarity and the phylogenetic tree. However, analysis of catalytic residues suggests that Aatyk proteins may be multispecific kinases, functioning also as serine/threonine kinases. They are involved in neural differentiation, nerve growth factor (NGF) signaling, apoptosis, and spermatogenesis. Length = 269

>gnl|CDD|173678 cd05587, STKc_cPKC, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

 Score = 64.8 bits (158), Expect = 4e-11
 Identities = 34/99 (34%), Positives = 59/99 (59%), Gaps = 6/99 (6%)

Query: 473 DVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRV-VG 531
           ++A G+ +LH    K +++RD+K  NV+LD E + ++ DFG+ + +  G    TTR   G
Sbjct: 109 EIAIGLFFLHS---KGIIYRDLKLDNVMLDAEGHIKIADFGMCKENIFGGK--TTRTFCG 163

Query: 532 TVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIE 570
           T  Y+APE+ +        D + FG+L+ E+L+G+ P +
Sbjct: 164 TPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFD 202

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory domain. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. cPKCs are potent kinases for histones, myelin basic protein, and protamine. PKC-gamma is mainly expressed in neuronal tissues. It plays a role in protection from ischemia. Length = 324

>gnl|CDD|132966 cd06635, STKc_TAO1, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

 Score = 64.7 bits (157), Expect = 4e-11
 Identities = 61/224 (27%), Positives = 98/224 (43%), Gaps = 37/224 (16%)

Query: 360 EAATKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAF---LAEISSLG 416
           E   K F++   IG G  G VY          +A+K++S+        +   + E+  L 
Sbjct: 21  EDPEKLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQ 80

Query: 417 RLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVA- 475
           R+KH + +  +G C   + +  LV +Y            C GS     E   + L++V  
Sbjct: 81  RIKHPNSIEYKG-CYLREHTAWLVMEY------------CLGSASDLLEVHKKPLQEVEI 127

Query: 476 --------AGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTT 527
                    G+ YLH      ++HRDIK+ N+LL +    +L DFG A +      +   
Sbjct: 128 AAITHGALQGLAYLHS---HNMIHRDIKAGNILLTEPGQVKLADFGSASI-----ASPAN 179

Query: 528 RVVGTVGYLAPEV---FSSGRASTQTDVFGFGILILEVLSGRRP 568
             VGT  ++APEV      G+   + DV+  GI  +E L+ R+P
Sbjct: 180 SFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIE-LAERKP 222

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuronal apoptosis. TAO1 interacts with the checkpoint proteins BubR1 and Mad2, and plays an important role in regulating mitotic progression, which is required for both chromosome congression and checkpoint-induced anaphase delay. TAO1 may play a role in protecting genomic stability. Length = 317

>gnl|CDD|133175 cd05043, PTK_Ryk, Pseudokinase domain of Ryk (Receptor related to tyrosine kinase)

 Score = 64.0 bits (156), Expect = 4e-11
 Identities = 56/220 (25%), Positives = 108/220 (49%), Gaps = 21/220 (9%)

Query: 370 NVIGVGGNGKVYKGVL--EGGGAEIAV---KRISHENDGGTRAFLAEISSLGRLKHKSLV 424
           +++  G  G+++ G+L  E  G E  V       H ++      L E   L  L H++++
Sbjct: 12  DLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQVTLLLQESCLLYGLSHQNIL 71

Query: 425 GLRGWCKREKGSLMLVYDYMENGSLDKWIFQC-----DGSMMLSCEERIRVLKDVAAGVL 479
            +   C  +     ++Y YM  G+L  ++ QC     +    LS ++ + +   +A G+ 
Sbjct: 72  PILHVCIEDGEPPFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMS 131

Query: 480 YLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLAR----MHGHGQVASTTRVVGTVGY 535
           YLH+   + V+H+DI + N ++D+E+  ++ D  L+R    M  H    +  R    V +
Sbjct: 132 YLHK---RGVIHKDIAARNCVIDEELQVKITDNALSRDLFPMDYHCLGDNENR---PVKW 185

Query: 536 LAPEVFSSGRASTQTDVFGFGILILEVLS-GRRPIEEGKP 574
           +A E   +   S+ +DV+ FG+L+ E+++ G+ P  E  P
Sbjct: 186 MALESLVNKEYSSASDVWSFGVLLWELMTLGQTPYVEIDP 225

Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It acts as a chemorepulsive axon guidance receptor of Wnt glycoproteins and is responsible for the establishment of axon tracts during the development of the central nervous system. In addition, studies in mice reveal that Ryk is essential in skeletal, craniofacial, and cardiac development. Thus, it appears Ryk is involved in signal transduction despite its lack of kinase activity. Ryk may function as an accessory protein that modulates the signals coming from catalytically active partner RTKs such as the Eph receptors. Length = 280

>gnl|CDD|173770 cd08528, STKc_Nek10, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

 Score = 63.7 bits (155), Expect = 4e-11
 Identities = 68/274 (24%), Positives = 122/274 (44%), Gaps = 31/274 (11%)

Query: 372 IGVGGNGKVYKGVLEGGGAEI-AVKRIS----------HENDGGTRAFLAEISSLG-RLK 419
           +G G  G VYK   +  G  + A+K I+           E D      ++E++ +  +L+
Sbjct: 8   LGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLR 67

Query: 420 HKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERI-RVLKDVAAGV 478
           H ++V        E   L +V D +E   L +             EERI  +   +   +
Sbjct: 68  HPNIVRYYK-TFLENDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLAL 126

Query: 479 LYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAP 538
            YLH+  EK+++HRD+  +N++L ++    + DFGLA+       +  T VVGT+ Y  P
Sbjct: 127 RYLHK--EKRIVHRDLTPNNIMLGEDDKVTITDFGLAKQ--KQPESKLTSVVGTILYSCP 182

Query: 539 EVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDARLR 598
           E+  +     + DV+ FG ++ ++ + + P      N++ +        K+++A+   L 
Sbjct: 183 EIVKNEPYGEKADVWAFGCILYQMCTLQPPFYST--NMLSLA------TKIVEAVYEPLP 234

Query: 599 AKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQV 632
                +    E V  +   C  PD  ARP + QV
Sbjct: 235 -----EGMYSEDVTDVITSCLTPDAEARPDIIQV 263

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24. Length = 269

>gnl|CDD|132938 cd06607, STKc_TAO, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

 Score = 64.4 bits (157), Expect = 4e-11
 Identities = 61/224 (27%), Positives = 100/224 (44%), Gaps = 45/224 (20%)

Query: 364 KGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAF---LAEISSLGRLKH 420
           K F++   IG G  G VY          +A+K++S+        +   + E+  L +L+H
Sbjct: 15  KLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRH 74

Query: 421 KSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLK------DV 474
            + +  +G C   + +  LV +Y            C GS      + + V K      ++
Sbjct: 75  PNTIEYKG-CYLREHTAWLVMEY------------CLGS----ASDILEVHKKPLQEVEI 117

Query: 475 AA-------GVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTT 527
           AA       G+ YLH     + +HRDIK+ N+LL +    +L DFG A +     V+   
Sbjct: 118 AAICHGALQGLAYLHS---HERIHRDIKAGNILLTEPGTVKLADFGSASL-----VSPAN 169

Query: 528 RVVGTVGYLAPEV---FSSGRASTQTDVFGFGILILEVLSGRRP 568
             VGT  ++APEV      G+   + DV+  GI  +E L+ R+P
Sbjct: 170 SFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIE-LAERKP 212

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily members, named TAO1, TAO2, and TAO3. Length = 307

>gnl|CDD|240233 PTZ00024, PTZ00024, cyclin-dependent protein kinase; Provisional

 Score = 64.4 bits (157), Expect = 4e-11
 Identities = 54/227 (23%), Positives = 103/227 (45%), Gaps = 40/227 (17%)

Query: 370 NVIGVGGNGKVYKGVLEGGGAEIAVKR-----ISHENDGGTR---------AFLAEISSL 415
             +G G  GKV K      G  +A+K+     IS++     +           L E+  +
Sbjct: 15  AHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIM 74

Query: 416 GRLKHKSLVGLRG-WCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDV 474
             +KH++++GL   +   E   + LV D M    L K +   D  + L+  +   +L  +
Sbjct: 75  NEIKHENIMGLVDVYV--EGDFINLVMDIMA-SDLKKVV---DRKIRLTESQVKCILLQI 128

Query: 475 AAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVAS--------- 525
             G+  LH+ +    +HRD+  +N+ ++ +   ++ DFGLAR +G+   +          
Sbjct: 129 LNGLNVLHKWY---FMHRDLSPANIFINSKGICKIADFGLARRYGYPPYSDTLSKDETMQ 185

Query: 526 -----TTRVVGTVGYLAPE-VFSSGRASTQTDVFGFGILILEVLSGR 566
                T++VV T+ Y APE +  + +     D++  G +  E+L+G+
Sbjct: 186 RREEMTSKVV-TLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTGK 231

Length = 335

>gnl|CDD|143374 cd07869, STKc_PFTAIRE1, Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

 Score = 64.3 bits (156), Expect = 4e-11
 Identities = 60/197 (30%), Positives = 99/197 (50%), Gaps = 12/197 (6%)

Query: 372 IGVGGNGKVYKGVLEGGGAEIAVKRIS-HENDGGTRAFLAEISSLGRLKHKSLVGLRGWC 430
           +G G    VYKG  +  G  +A+K I   E +G     + E S L  LKH ++V L    
Sbjct: 13  LGEGSYATVYKGKSKVNGKLVALKVIRLQEEEGTPFTAIREASLLKGLKHANIVLLHDII 72

Query: 431 KREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRV-LKDVAAGVLYLHEGWEKKV 489
              K +L LV++Y+    L +++ +  G +     E +++ L  +  G+ Y+H+   + +
Sbjct: 73  -HTKETLTLVFEYVHT-DLCQYMDKHPGGLH---PENVKLFLFQLLRGLSYIHQ---RYI 124

Query: 490 LHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEV-FSSGRAST 548
           LHRD+K  N+L+      +L DFGLAR         +  VV T+ Y  P+V   S   ST
Sbjct: 125 LHRDLKPQNLLISDTGELKLADFGLARAKSVPSHTYSNEVV-TLWYRPPDVLLGSTEYST 183

Query: 549 QTDVFGFGILILEVLSG 565
             D++G G + +E++ G
Sbjct: 184 CLDMWGVGCIFVEMIQG 200

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 and is inhibited by the p21 cell cycle inhibitor. It has also been shown to interact with the membrane-associated cyclin Y, which recruits the protein to the plasma membrane. Length = 303

>gnl|CDD|173695 cd05604, STKc_SGK3, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3

 Score = 64.3 bits (156), Expect = 5e-11
 Identities = 64/203 (31%), Positives = 93/203 (45%), Gaps = 14/203 (6%)

Query: 371 VIGVGGNGKVYKGVLEGGGAEIAVKRISHE---NDGGTRAFLAEISSLGR-LKHKSLVGL 426
           VIG G  GKV     +  G   AVK +  +   N    +  +AE + L + +KH  LVGL
Sbjct: 2   VIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGL 61

Query: 427 RGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRV-LKDVAAGVLYLHEGW 485
             +  +    L  V D++  G L    F          E R R    ++A+ + YLH   
Sbjct: 62  H-YSFQTTEKLYFVLDFVNGGEL---FFHLQRERSFP-EPRARFYAAEIASALGYLHS-- 114

Query: 486 EKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGR 545
              +++RD+K  N+LLD + +  L DFGL +  G  Q  +TT   GT  YLAPEV     
Sbjct: 115 -INIVYRDLKPENILLDSQGHVVLTDFGLCK-EGIAQSDTTTTFCGTPEYLAPEVIRKQP 172

Query: 546 ASTQTDVFGFGILILEVLSGRRP 568
                D +  G ++ E+L G  P
Sbjct: 173 YDNTVDWWCLGAVLYEMLYGLPP 195

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels, and receptors. It plays a critical role in hair follicle morphogenesis and hair cycling. Length = 325

>gnl|CDD|173706 cd05615, STKc_cPKC_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha

 Score = 64.2 bits (156), Expect = 5e-11
 Identities = 33/111 (29%), Positives = 64/111 (57%), Gaps = 5/111 (4%)

Query: 473 DVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRVVGT 532
           +++ G+ +LH    + +++RD+K  NV+LD E + ++ DFG+ + H    V + T   GT
Sbjct: 109 EISVGLFFLHR---RGIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMVDGVTTRT-FCGT 164

Query: 533 VGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIE-EGKPNLVEMVWE 582
             Y+APE+ +        D + +G+L+ E+L+G+ P + E +  L + + E
Sbjct: 165 PDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDELFQSIME 215

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. PKC-alpha is expressed in many tissues and is associated with cell proliferation, apoptosis, and cell motility. It plays a role in the signaling of the growth factors PDGF, VEGF, EGF, and FGF. Abnormal levels of PKC-alpha have been detected in many transformed cell lines and several human tumors. In addition, PKC-alpha is required for HER2 dependent breast cancer invasion. Length = 323

>gnl|CDD|173662 cd05571, STKc_PKB, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

 Score = 64.1 bits (156), Expect = 5e-11
 Identities = 48/161 (29%), Positives = 76/161 (47%), Gaps = 10/161 (6%)

Query: 409 LAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERI 468
           L E   L   +H  L  L+ +  +    L  V +Y   G L    F      + S E+R 
Sbjct: 43  LTESRVLQNTRHPFLTALK-YSFQTHDRLCFVMEYANGGEL---FFHLSRERVFS-EDRA 97

Query: 469 RVL-KDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTT 527
           R    ++ + + YLH      V++RD+K  N++LDK+ + ++ DFGL +  G    A+  
Sbjct: 98  RFYGAEIVSALGYLHS---CDVVYRDLKLENLMLDKDGHIKITDFGLCK-EGISDGATMK 153

Query: 528 RVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRP 568
              GT  YLAPEV          D +G G+++ E++ GR P
Sbjct: 154 TFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 194

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having been implicated in tumor initiation, progression, and metastasis. Length = 323

>gnl|CDD|143364 cd07859, STKc_TDY_MAPK_plant, Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

 Score = 64.0 bits (156), Expect = 7e-11
 Identities = 64/217 (29%), Positives = 105/217 (48%), Gaps = 22/217 (10%)

Query: 369 ENVIGVGGNGKVYKGVLEGGGAEIAVKRIS----HENDGGTRAFLAEISSLGRLKHKSLV 424
           + VIG G  G V   +    G ++A+K+I+    H +D  TR  L EI  L  L+H  +V
Sbjct: 5   QEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDA-TR-ILREIKLLRLLRHPDIV 62

Query: 425 GLRGW----CKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLY 480
            ++       +RE   + +V++ ME+  L + I   D    L+ E     L  +   + Y
Sbjct: 63  EIKHIMLPPSRREFKDIYVVFELMES-DLHQVIKANDD---LTPEHHQFFLYQLLRALKY 118

Query: 481 LHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVAST--TRVVGTVGYLAP 538
           +H      V HRD+K  N+L + +   ++ DFGLAR+  +    +   T  V T  Y AP
Sbjct: 119 IHTA---NVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAP 175

Query: 539 EVFSS--GRASTQTDVFGFGILILEVLSGRRPIEEGK 573
           E+  S   + +   D++  G +  EVL+G +P+  GK
Sbjct: 176 ELCGSFFSKYTPAIDIWSIGCIFAEVLTG-KPLFPGK 211

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activation loop, TEY and TDY. Arabidopsis thaliana contains more TEY-type MAPKs than TDY-type, whereas the reverse is true for Oryza sativa. This subfamily represents the TDY subtype and is composed of Group D plant MAPKs including Arabidopsis thaliana MPK18 (AtMPK18), Oryza sativa Blast- and Wound-induced MAPK1 (OsBWMK1), OsWJUMK1 (Wound- and JA-Uninducible MAPK1), Zea mays MPK6, and the Medicago sativa TDY1 gene product. OsBWMK1 enhances resistance to pathogenic infections. It mediates stress-activated defense responses by activating a transcription factor that affects the expression of stress-related genes. AtMPK18 is involved in microtubule-related functions. Length = 338

>gnl|CDD|173642 cd05075, PTKc_Axl, Catalytic domain of the Protein Tyrosine Kinase, Axl

 Score = 63.1 bits (153), Expect = 7e-11
 Identities = 54/211 (25%), Positives = 105/211 (49%), Gaps = 17/211 (8%)

Query: 372 IGVGGNGKVYKGVL--EGGGAEIAVK--RISHENDGGTRAFLAEISSLGRLKHKSLVGLR 427
           +G G  G V +G L  +    ++AVK  +I+         FL+E   +    H +++ L 
Sbjct: 7   LGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMRLI 66

Query: 428 GWC----KREK-GSLMLVYDYMENGSLDKWIFQC---DGSMMLSCEERIRVLKDVAAGVL 479
           G C    + E   S +++  +M++G L  ++      D    L  +  ++ + D+A+G+ 
Sbjct: 67  GVCLQTVESEGYPSPVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGME 126

Query: 480 YLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRVVGT-VGYLAP 538
           YL     K  +HRD+ + N +L++ MN  + DFGL++   +G      R+    V ++A 
Sbjct: 127 YLSS---KSFIHRDLAARNCMLNENMNVCVADFGLSKKIYNGDYYRQGRIAKMPVKWIAI 183

Query: 539 EVFSSGRASTQTDVFGFGILILEVLS-GRRP 568
           E  +    +T++DV+ FG+ + E+ + G+ P
Sbjct: 184 ESLADRVYTTKSDVWSFGVTMWEIATRGQTP 214

Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transformed cells. Axl signaling is important in many cellular functions such as survival, anti-apoptosis, proliferation, migration, and adhesion. Axl was originally isolated from patients with chronic myelogenous leukemia and a chronic myeloproliferative disorder. Axl is overexpressed in many human cancers including colon, squamous cell, thyroid, breast, and lung carcinomas. Length = 272

>gnl|CDD|132976 cd06645, STKc_MAP4K3, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

 Score = 63.1 bits (153), Expect = 7e-11
 Identities = 60/207 (28%), Positives = 95/207 (45%), Gaps = 13/207 (6%)

Query: 372 IGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRG-WC 430
           IG G  G VYK      G   A+K I  E          EI  +   KH ++V   G + 
Sbjct: 17  IGSGTYGDVYKARNVNTGELAAIKVIKLEPGEDFAVVQQEIIMMKDCKHSNIVAYFGSYL 76

Query: 431 KREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVL 490
           +R+K  L +  ++   GSL   I+   G   LS  +   V ++   G+ YLH    K  +
Sbjct: 77  RRDK--LWICMEFCGGGSLQD-IYHVTGP--LSESQIAYVSRETLQGLYYLHS---KGKM 128

Query: 491 HRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFS---SGRAS 547
           HRDIK +N+LL    + +L DFG++       +A     +GT  ++APEV +    G  +
Sbjct: 129 HRDIKGANILLTDNGHVKLADFGVS-AQITATIAKRKSFIGTPYWMAPEVAAVERKGGYN 187

Query: 548 TQTDVFGFGILILEVLSGRRPIEEGKP 574
              D++  GI  +E+   + P+ +  P
Sbjct: 188 QLCDIWAVGITAIELAELQPPMFDLHP 214

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K3 plays a role in the nutrient-responsive pathway of mTOR (mammalian target of rapamycin) signaling. MAP4K3 is required in the activation of S6 kinase by amino acids and for the phosphorylation of the mTOR-regulated inhibitor of eukaryotic initiation factor 4E. mTOR regulates ribosome biogenesis and protein translation, and is frequently deregulated in cancer. Length = 267

>gnl|CDD|173707 cd05616, STKc_cPKC_beta, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

 Score = 63.9 bits (155), Expect = 7e-11
 Identities = 36/111 (32%), Positives = 64/111 (57%), Gaps = 5/111 (4%)

Query: 473 DVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRVVGT 532
           ++A G+ +LH    K +++RD+K  NV+LD E + ++ DFG+ + +    V + T   GT
Sbjct: 109 EIAIGLFFLHS---KGIIYRDLKLDNVMLDSEGHIKIADFGMCKENMWDGVTTKT-FCGT 164

Query: 533 VGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIE-EGKPNLVEMVWE 582
             Y+APE+ +        D + FG+L+ E+L+G+ P E E +  L + + E
Sbjct: 165 PDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIME 215

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. The PKC beta isoforms (I and II), generated by alternative splicing of a single gene, are preferentially activated by hyperglycemia-induced DAG in retinal tissues. This is implicated in diabetic microangiopathy such as ischemia, neovascularization, and abnormal vasodilator function. PKC-beta also plays an important role in VEGF signaling. In addition, glucose regulates proliferation in retinal endothelial cells via PKC-betaI. PKC-beta is also being explored as a therapeutic target in cancer. It contributes to tumor formation and is involved in the tumor host mechanisms of inflammation and angiogenesis. Length = 323

>gnl|CDD|173671 cd05580, STKc_PKA, Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

 Score = 63.3 bits (155), Expect = 8e-11
 Identities = 55/172 (31%), Positives = 81/172 (47%), Gaps = 35/172 (20%)

Query: 409 LAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERI 468
           L E   L  ++H  LV L G  + +  +L LV +Y+  G L   + +             
Sbjct: 49  LNEKRILQSIRHPFLVNLYGSFQDDS-NLYLVMEYVPGGELFSHLRKSG----------- 96

Query: 469 RVLKDV----AAGVL----YLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLA-RMHG 519
           R  + V    AA V+    YLH      +++RD+K  N+LLD +   ++ DFG A R+ G
Sbjct: 97  RFPEPVARFYAAQVVLALEYLHS---LDIVYRDLKPENLLLDSDGYIKITDFGFAKRVKG 153

Query: 520 HGQVASTTRVVGTVGYLAPEVFSS---GRASTQTDVFGFGILILEVLSGRRP 568
                 T  + GT  YLAPE+  S   G+A    D +  GILI E+L+G  P
Sbjct: 154 R-----TYTLCGTPEYLAPEIILSKGYGKAV---DWWALGILIYEMLAGYPP 197

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubiquitously in cells and interacts with many different downstream targets. It plays a role in the regulation of diverse processes such as growth, development, memory, metabolism, gene expression, immunity, and lipolysis. Length = 290

>gnl|CDD|143372 cd07867, STKc_CDC2L6, Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6

 Score = 63.5 bits (154), Expect = 8e-11
 Identities = 63/214 (29%), Positives = 98/214 (45%), Gaps = 32/214 (14%)

Query: 372 IGVGGNGKVYKGVLEGGG--AEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRG- 428
           +G G  G VYK   + G    E A+K+I  E  G + +   EI+ L  LKH +++ L+  
Sbjct: 9   VGRGTYGHVYKAKRKDGKDEKEYALKQI--EGTGISMSACREIALLRELKHPNVIALQKV 66

Query: 429 WCKREKGSLMLVYDYMEN-----------GSLDKWIFQCDGSMMLSCEERIRVLKDVAAG 477
           +       + L++DY E+              +K   Q   SM+ S      +L  +  G
Sbjct: 67  FLSHSDRKVWLLFDYAEHDLWHIIKFHRASKANKKPMQLPRSMVKS------LLYQILDG 120

Query: 478 VLYLHEGWEKKVLHRDIKSSNVLLDKEMNGR----LGDFGLARMHGH--GQVASTTRVVG 531
           + YLH  W   VLHRD+K +N+L+  E   R    + D G AR+       +A    VV 
Sbjct: 121 IHYLHANW---VLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVV 177

Query: 532 TVGYLAPEVFSSGRASTQT-DVFGFGILILEVLS 564
           T  Y APE+    R  T+  D++  G +  E+L+
Sbjct: 178 TFWYRAPELLLGARHYTKAIDIWAIGCIFAELLT 211

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as the caspase-processed CDK11(p46). CDK11(p110), CDK11(p58), and CDK11(p46)do not belong to this subfamily. CDC2L6 is an associated protein of Mediator, a multiprotein complex that provides a platform to connect transcriptional and chromatin regulators and cofactors, in order to activate and mediate RNA polymerase II transcription. CDC2L6 is localized mainly in the nucleus amd exerts an opposing effect to CDK8 in VP16-dependent transcriptional activation by being a negative regulator. Length = 317

>gnl|CDD|132977 cd06646, STKc_MAP4K5, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

 Score = 62.7 bits (152), Expect = 8e-11
 Identities = 63/207 (30%), Positives = 95/207 (45%), Gaps = 13/207 (6%)

Query: 372 IGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRG-WC 430
           +G G  G VYK      G   AVK I  E          EI  +   KH ++V   G + 
Sbjct: 17  VGSGTYGDVYKARNLHTGELAAVKIIKLEPGDDFSLIQQEIFMVKECKHCNIVAYFGSYL 76

Query: 431 KREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVL 490
            REK  L +  +Y   GSL   I+   G   LS  +   V ++   G+ YLH    K  +
Sbjct: 77  SREK--LWICMEYCGGGSLQD-IYHVTGP--LSELQIAYVCRETLQGLAYLHS---KGKM 128

Query: 491 HRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFS---SGRAS 547
           HRDIK +N+LL    + +L DFG+A       +A     +GT  ++APEV +   +G  +
Sbjct: 129 HRDIKGANILLTDNGDVKLADFGVA-AKITATIAKRKSFIGTPYWMAPEVAAVEKNGGYN 187

Query: 548 TQTDVFGFGILILEVLSGRRPIEEGKP 574
              D++  GI  +E+   + P+ +  P
Sbjct: 188 QLCDIWAVGITAIELAELQPPMFDLHP 214

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K5, also called germinal center kinase-related enzyme (GCKR), has been shown to activate the MAPK c-Jun N-terminal kinase (JNK). MAP4K5 also facilitates Wnt signaling in B cells, and may therefore be implicated in the control of cell fate, proliferation, and polarity. Length = 267

>gnl|CDD|173686 cd05595, STKc_PKB_beta, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

 Score = 63.5 bits (154), Expect = 9e-11
 Identities = 48/161 (29%), Positives = 77/161 (47%), Gaps = 10/161 (6%)

Query: 409 LAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERI 468
           + E   L   +H  L  L+ +  +    L  V +Y   G L    F      + + EER 
Sbjct: 43  VTESRVLQNTRHPFLTALK-YAFQTHDRLCFVMEYANGGEL---FFHLSRERVFT-EERA 97

Query: 469 RVL-KDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTT 527
           R    ++ + + YLH    + V++RDIK  N++LDK+ + ++ DFGL +  G    A+  
Sbjct: 98  RFYGAEIVSALEYLHS---RDVVYRDIKLENLMLDKDGHIKITDFGLCK-EGISDGATMK 153

Query: 528 RVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRP 568
              GT  YLAPEV          D +G G+++ E++ GR P
Sbjct: 154 TFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 194

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in PKB-beta display normal growth weights but exhibit severe insulin resistance and diabetes, accompanied by lipoatrophy and B-cell failure. Length = 323

>gnl|CDD|173694 cd05603, STKc_SGK2, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

 Score = 63.5 bits (154), Expect = 9e-11
 Identities = 64/203 (31%), Positives = 91/203 (44%), Gaps = 14/203 (6%)

Query: 371 VIGVGGNGKVYKGVLEGGGAEIAVKRISHE---NDGGTRAFLAEISSLGR-LKHKSLVGL 426
           VIG G  GKV     +  G+  AVK +  +           +AE + L + LKH  LVGL
Sbjct: 2   VIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGL 61

Query: 427 RGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLK-DVAAGVLYLHEGW 485
             +  +    L  V DY+  G L    F          E R R    +VA+ + YLH   
Sbjct: 62  H-YSFQTAEKLYFVLDYVNGGEL---FFHLQRERCFL-EPRARFYAAEVASAIGYLHS-- 114

Query: 486 EKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGR 545
              +++RD+K  N+LLD + +  L DFGL +  G     +T+   GT  YLAPEV     
Sbjct: 115 -LNIIYRDLKPENILLDSQGHVVLTDFGLCK-EGVEPEETTSTFCGTPEYLAPEVLRKEP 172

Query: 546 ASTQTDVFGFGILILEVLSGRRP 568
                D +  G ++ E+L G  P
Sbjct: 173 YDRTVDWWCLGAVLYEMLYGLPP 195

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1. Length = 321

>gnl|CDD|132965 cd06634, STKc_TAO2, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

 Score = 63.1 bits (153), Expect = 1e-10
 Identities = 62/220 (28%), Positives = 104/220 (47%), Gaps = 37/220 (16%)

Query: 364 KGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISH---ENDGGTRAFLAEISSLGRLKH 420
           K FS+   IG G  G VY          +A+K++S+   +++   +  + E+  L +L+H
Sbjct: 15  KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRH 74

Query: 421 KSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSM--MLSCEERIRVLKDVAA-- 476
            + +  RG C   + +  LV +Y            C GS   +L   ++     ++AA  
Sbjct: 75  PNTIQYRG-CYLREHTAWLVMEY------------CLGSASDLLEVHKKPLQEVEIAAVT 121

Query: 477 -----GVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRVVG 531
                G+ YLH      ++HRD+K+ N+LL +    +LGDFG A +     +A     VG
Sbjct: 122 HGALQGLAYLHS---HNMIHRDVKAGNILLSEPGLVKLGDFGSASI-----MAPANXFVG 173

Query: 532 TVGYLAPEV---FSSGRASTQTDVFGFGILILEVLSGRRP 568
           T  ++APEV      G+   + DV+  GI  +E L+ R+P
Sbjct: 174 TPYWMAPEVILAMDEGQYDGKVDVWSLGITCIE-LAERKP 212

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. TAO2 contains a long C-terminal extension with autoinhibitory segments. It is activated by the release of this inhibition and the phosphorylation of its activation loop serine. TAO2 functions as a regulator of actin cytoskeletal and microtubule organization. In addition, it regulates the transforming growth factor-activated kinase 1 (TAK1), which is a MAPKKK that plays an essential role in the signaling pathways of tumor necrosis factor (TNF), interleukin 1 (IL-1), and Toll-like receptor (TLR). Length = 308

>gnl|CDD|177557 PHA03209, PHA03209, serine/threonine kinase US3; Provisional

 Score = 63.4 bits (154), Expect = 1e-10
 Identities = 55/241 (22%), Positives = 109/241 (45%), Gaps = 22/241 (9%)

Query: 336 AREREEMEDWELEYWPHRITYQEIEAATKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVK 395
           A E ++ +D  L   P +   +E+  A+ G++    +  G  G+V+     G    + +K
Sbjct: 41  ASESDDDDDDGLI--PTKQKAREV-VASLGYTVIKTLTPGSEGRVFVATKPGQPDPVVLK 97

Query: 396 RISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQ 455
                  G     L E   L  + H S++ ++        + M++  Y    S D + + 
Sbjct: 98  I------GQKGTTLIEAMLLQNVNHPSVIRMKDTLVSGAITCMVLPHY----SSDLYTYL 147

Query: 456 CDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLA 515
              S  L  ++ + + K +  G+ YLH    ++++HRD+K+ N+ ++      +GD G A
Sbjct: 148 TKRSRPLPIDQALIIEKQILEGLRYLHA---QRIIHRDVKTENIFINDVDQVCIGDLGAA 204

Query: 516 RMHGHGQVASTTR--VVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGK 573
           +      V +     + GTV   APEV +  + +++ D++  GI++ E+L+    I E  
Sbjct: 205 QF----PVVAPAFLGLAGTVETNAPEVLARDKYNSKADIWSAGIVLFEMLAYPSTIFEDP 260

Query: 574 P 574
           P
Sbjct: 261 P 261

Length = 357

>gnl|CDD|173627 cd05037, PTK_Jak_rpt1, Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases

 Score = 62.1 bits (151), Expect = 1e-10
 Identities = 69/284 (24%), Positives = 124/284 (43%), Gaps = 47/284 (16%)

Query: 372 IGVGGNGKVYKGVLE--------GGGAEIAVKR-ISHENDGGTRAFLAEISSLGRLKHKS 422
           +G G    +YKGVL         G G E++V   +   +   + AF    S + +L HK 
Sbjct: 3   LGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRDSLAFFETASLMSQLSHKH 62

Query: 423 LVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLH 482
           LV L G C R++   ++V +Y++ G LD ++ +   ++ L    ++ V K +A+ + YL 
Sbjct: 63  LVKLYGVCVRDEN--IMVEEYVKFGPLDVFLHREKNNVSLHW--KLDVAKQLASALHYLE 118

Query: 483 EGWEKKVLHRDIKSSNVLLDK-EMNG------RLGDFGLARMHGHGQVASTTRVVGTVGY 535
              +KK++H ++   N+L+ +  +N       +L D G+        V S    V  + +
Sbjct: 119 ---DKKLVHGNVCGKNILVARYGLNEGYVPFIKLSDPGIPI-----TVLSREERVERIPW 170

Query: 536 LAPEVFSSGRASTQT--DVFGFGILILEVLS-GRRPIEEGKPNLVEMVWELMVQGKLLDA 592
           +APE   +G+AS     D + FG  +LE+ S G  P+                  K    
Sbjct: 171 IAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTLSS-----------SEKER-- 217

Query: 593 LDARLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVL 636
                + +      +   + +L   C   DP  RP+ R +++ L
Sbjct: 218 ---FYQDQHRLPMPDCAELANLINQCWTYDPTKRPSFRAILRDL 258

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jaks are also involved in regulating the surface expression of some cytokine receptors. The Jak-STAT pathway is involved in many biological processes including hematopoiesis, immunoregulation, host defense, fertility, lactation, growth, and embryogenesis. Length = 259

>gnl|CDD|173679 cd05588, STKc_aPKC, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C

 Score = 62.9 bits (153), Expect = 1e-10
 Identities = 45/152 (29%), Positives = 77/152 (50%), Gaps = 10/152 (6%)

Query: 420 HKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLK-DVAAGV 478
           H  LVGL   C + +  L  V +++  G L   +F       L  EE  R    +++  +
Sbjct: 55  HPFLVGLHS-CFQTESRLFFVIEFVSGGDL---MFHMQRQRKLP-EEHARFYSAEISLAL 109

Query: 479 LYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAP 538
            +LHE   + +++RD+K  NVLLD E + +L D+G+ +  G     +T+   GT  Y+AP
Sbjct: 110 NFLHE---RGIIYRDLKLDNVLLDAEGHIKLTDYGMCK-EGIRPGDTTSTFCGTPNYIAP 165

Query: 539 EVFSSGRASTQTDVFGFGILILEVLSGRRPIE 570
           E+          D +  G+L+ E+++GR P +
Sbjct: 166 EILRGEDYGFSVDWWALGVLMFEMMAGRSPFD 197

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions including proliferation, migration, apoptosis, polarity maintenance and cytoskeletal regulation. They also play a critical role in the regulation of glucose metabolism and in the pathogenesis of type 2 diabetes. Length = 329

>gnl|CDD|173674 cd05583, STKc_MSK_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

 Score = 62.5 bits (152), Expect = 1e-10
 Identities = 43/134 (32%), Positives = 65/134 (48%), Gaps = 8/134 (5%)

Query: 437 LMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKS 496
           L L+ DY+  G L   ++Q +       E  +RV   +A  VL L    +  +++RDIK 
Sbjct: 80  LHLILDYVNGGELFTHLYQREHFT----ESEVRVY--IAEIVLALDHLHQLGIIYRDIKL 133

Query: 497 SNVLLDKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRA--STQTDVFG 554
            N+LLD E +  L DFGL++     +        GT+ Y+APEV   G        D + 
Sbjct: 134 ENILLDSEGHVVLTDFGLSKEFLAEEEERAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWS 193

Query: 555 FGILILEVLSGRRP 568
            G+L  E+L+G  P
Sbjct: 194 LGVLTFELLTGASP 207

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines. This triggers phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) in the C-terminal extension of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSKs are predominantly nuclear proteins. They are widely expressed in many tissues including heart, brain, lung, liver, kidney, and pancreas. There are two isoforms of MSK, called MSK1 and MSK2. Length = 288

>gnl|CDD|173673 cd05582, STKc_RSK_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

 Score = 62.9 bits (153), Expect = 1e-10
 Identities = 41/137 (29%), Positives = 73/137 (53%), Gaps = 7/137 (5%)

Query: 434 KGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRD 493
           +G L L+ D++  G L     +    +M + E+    L ++A  + +LH      +++RD
Sbjct: 70  EGKLYLILDFLRGGDL---FTRLSKEVMFTEEDVKFYLAELALALDHLHS---LGIIYRD 123

Query: 494 IKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVF 553
           +K  N+LLD+E + +L DFGL++     +        GTV Y+APEV +    +   D +
Sbjct: 124 LKPENILLDEEGHIKLTDFGLSKESIDHE-KKAYSFCGTVEYMAPEVVNRRGHTQSADWW 182

Query: 554 GFGILILEVLSGRRPIE 570
            FG+L+ E+L+G  P +
Sbjct: 183 SFGVLMFEMLTGSLPFQ 199

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylates all known RSK substrates. RSKs act as downstream effectors of mitogen-activated protein kinase (MAPK) and play key roles in mitogen-activated cell growth, differentiation, and survival. Mammals possess four RSK isoforms (RSK1-4) from distinct genes. RSK proteins are also referred to as MAP kinase-activated protein kinases (MAPKAPKs), p90-RSKs, or p90S6Ks. Length = 318

>gnl|CDD|173745 cd07848, STKc_CDKL5, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5

 Score = 62.3 bits (151), Expect = 2e-10
 Identities = 58/211 (27%), Positives = 97/211 (45%), Gaps = 10/211 (4%)

Query: 371 VIGVGGNGKVYKGVLEGGGAEIAVKRI--SHENDGGTRAFLAEISSLGRLKHKSLVGLRG 428
           V+G G  G V K   +     +A+K+   S EN+      L E+  L  LK +++V L+ 
Sbjct: 8   VVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENIVELKE 67

Query: 429 WCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKK 488
             +R +G L LV++Y+E   L+      +G         I  L      +  +H   +  
Sbjct: 68  AFRR-RGKLYLVFEYVEKNMLELLEEMPNGVPPEKVRSYIYQL------IKAIHWCHKND 120

Query: 489 VLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRAST 548
           ++HRDIK  N+L+      +L DFG AR    G  A+ T  V T  Y +PE+        
Sbjct: 121 IVHRDIKPENLLISHNDVLKLCDFGFARNLSEGSNANYTEYVATRWYRSPELLLGAPYGK 180

Query: 549 QTDVFGFGILILEVLSGRRPIEEGKPNLVEM 579
             D++  G ++ E LS  +P+  G+  + ++
Sbjct: 181 AVDMWSVGCILGE-LSDGQPLFPGESEIDQL 210

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes cause a phenotype similar to Rett syndrome (RTT), a progressive neurodevelopmental disorder. These pathogenic mutations are located in the N-terminal portion of the protein within the kinase domain. Length = 287

>gnl|CDD|173692 cd05601, STKc_CRIK, Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

 Score = 62.1 bits (151), Expect = 2e-10
 Identities = 48/152 (31%), Positives = 75/152 (49%), Gaps = 21/152 (13%)

Query: 432 REKGSLMLVYDYMENGSL----DKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEK 487
           ++K +L LV +Y   G L    +++  Q D  M        +    +A  VL +H   + 
Sbjct: 71  QDKDNLYLVMEYQPGGDLLSLLNRYEDQFDEDM-------AQFY--LAELVLAIHSVHQM 121

Query: 488 KVLHRDIKSSNVLLDKEMNGRLGDFG-LARMHGHGQVASTTRVVGTVGYLAPEVFSS--- 543
             +HRDIK  NVL+D+  + +L DFG  AR+  +  V S    VGT  Y+APEV ++   
Sbjct: 122 GYVHRDIKPENVLIDRTGHIKLADFGSAARLTANKMVNSKLP-VGTPDYIAPEVLTTMNG 180

Query: 544 ---GRASTQTDVFGFGILILEVLSGRRPIEEG 572
              G    + D +  G++  E++ GR P  EG
Sbjct: 181 DGKGTYGVECDWWSLGVIAYEMIYGRSPFHEG 212

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnormal cytokinesis and massive apoptosis in neuronal precursors. A Down syndrome critical region protein TTC3 interacts with CRIK and inhibits CRIK-dependent neuronal differentiation and neurite extension. Length = 330

>gnl|CDD|173677 cd05586, STKc_Sck1_like, Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

 Score = 62.3 bits (151), Expect = 2e-10
 Identities = 48/147 (32%), Positives = 72/147 (48%), Gaps = 9/147 (6%)

Query: 423 LVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLH 482
           +VGL+ +  +    L LV DYM  G L  W  Q +G      E+R +    +A  VL L 
Sbjct: 58  IVGLK-FSFQTDSDLYLVTDYMSGGEL-FWHLQKEGRFS---EDRAKFY--IAELVLALE 110

Query: 483 EGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFS 542
              +  +++RD+K  N+LLD   +  L DFGL++ +      +T    GT  YLAPEV  
Sbjct: 111 HLHKYDIVYRDLKPENILLDATGHIALCDFGLSKANLTDN-KTTNTFCGTTEYLAPEVLL 169

Query: 543 SGRAST-QTDVFGFGILILEVLSGRRP 568
             +  T   D +  G+L+ E+  G  P
Sbjct: 170 DEKGYTKHVDFWSLGVLVFEMCCGWSP 196

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of yeast to environmental changes. Length = 330

>gnl|CDD|132988 cd06657, STKc_PAK4, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

 Score = 61.6 bits (149), Expect = 3e-10
 Identities = 49/197 (24%), Positives = 90/197 (45%), Gaps = 9/197 (4%)

Query: 372 IGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCK 431
           IG G  G V    ++  G  +AVK++             E+  +   +H+++V +     
Sbjct: 28  IGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYN-SY 86

Query: 432 REKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLH 491
                L +V +++E G+L   +        ++ E+   V   V   +  LH    + V+H
Sbjct: 87  LVGDELWVVMEFLEGGALTDIVTH----TRMNEEQIAAVCLAVLKALSVLHA---QGVIH 139

Query: 492 RDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTD 551
           RDIKS ++LL  +   +L DFG        +V     +VGT  ++APE+ S      + D
Sbjct: 140 RDIKSDSILLTHDGRVKLSDFGFC-AQVSKEVPRRKSLVGTPYWMAPELISRLPYGPEVD 198

Query: 552 VFGFGILILEVLSGRRP 568
           ++  GI+++E++ G  P
Sbjct: 199 IWSLGIMVIEMVDGEPP 215

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell morphology and cytoskeletal organization. It is essential for embryonic viability and proper neural development. Mice lacking PAK4 die due to defects in the fetal heart. In addition, their spinal cord motor neurons showed failure to differentiate and migrate. PAK4 also plays a role in cell survival and tumorigenesis. It is overexpressed in many primary tumors including colon, esophageal, and mammary tumors. PAK4 has also been implicated in viral and bacterial infection pathways. Length = 292

>gnl|CDD|132964 cd06633, STKc_TAO3, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

 Score = 61.2 bits (148), Expect = 5e-10
 Identities = 61/212 (28%), Positives = 97/212 (45%), Gaps = 37/212 (17%)

Query: 372 IGVGGNGKVYKGVLEGGGAEIAVKRISH---ENDGGTRAFLAEISSLGRLKHKSLVGLRG 428
           IG G  G VY          +AVK++S+   + +   +  + E+  L +LKH + +  +G
Sbjct: 29  IGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKG 88

Query: 429 WCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDV--AA-------GVL 479
            C  ++ +  LV +Y            C GS     E   + L++V  AA       G+ 
Sbjct: 89  -CYLKEHTAWLVMEY------------CLGSASDLLEVHKKPLQEVEIAAITHGALQGLA 135

Query: 480 YLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPE 539
           YLH      ++HRDIK+ N+LL +    +L DFG A        +     VGT  ++APE
Sbjct: 136 YLHS---HNMIHRDIKAGNILLTEPGQVKLADFGSASK-----SSPANSFVGTPYWMAPE 187

Query: 540 V---FSSGRASTQTDVFGFGILILEVLSGRRP 568
           V      G+   + DV+  GI  +E L+ R+P
Sbjct: 188 VILAMDEGQYDGKVDVWSLGITCIE-LAERKP 218

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a component of the RAM (regulation of Ace2p activity and cellular morphogenesis) signaling pathway. TAO3 is upregulated in retinal ganglion cells after axotomy, and may play a role in apoptosis. Length = 313

>gnl|CDD|173651 cd05095, PTKc_DDR2, Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2

 Score = 60.7 bits (147), Expect = 6e-10
 Identities = 49/183 (26%), Positives = 90/183 (49%), Gaps = 14/183 (7%)

Query: 392 IAVKRISHENDGGTRA-FLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLD 450
           +AVK +  + +   R  FL EI  + RLK  +++ L   C      L ++ +YMENG L+
Sbjct: 49  VAVKMLREDANKNARNDFLKEIKIMSRLKDPNIIRLLAVCI-TSDPLCMITEYMENGDLN 107

Query: 451 KWI----FQCDG----SMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLD 502
           +++     Q        + +S    I +   +A+G+ YL        +HRD+ + N L+ 
Sbjct: 108 QFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSS---LNFVHRDLATRNCLVG 164

Query: 503 KEMNGRLGDFGLARMHGHGQVASTT-RVVGTVGYLAPEVFSSGRASTQTDVFGFGILILE 561
           K    ++ DFG++R    G       R V  + +++ E    G+ +T +DV+ FG+ + E
Sbjct: 165 KNYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWESILLGKFTTASDVWAFGVTLWE 224

Query: 562 VLS 564
           +L+
Sbjct: 225 ILT 227

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues with the highest levels found in skeletal muscle, skin, kidney and lung. It is important in cell proliferation and development. Mice, with a deletion of DDR2, suffer from dwarfism and delayed healing of epidermal wounds. DDR2 also contributes to collagen (type I) regulation by inhibiting fibrillogenesis and altering the morphology of collagen fibers. It is also expressed in immature dendritic cells (DCs), where it plays a role in DC activation and function. Length = 296

>gnl|CDD|132970 cd06639, STKc_myosinIIIB, Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

 Score = 60.4 bits (146), Expect = 6e-10
 Identities = 63/219 (28%), Positives = 103/219 (47%), Gaps = 26/219 (11%)

Query: 372 IGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRL-KHKSLVGLRG-W 429
           IG G  GKVYK   +  G+  AVK +   +D       AE + L  L  H ++V   G +
Sbjct: 30  IGKGTYGKVYKVTNKKDGSLAAVKILDPISDV-DEEIEAEYNILQSLPNHPNVVKFYGMF 88

Query: 430 CKREK---GSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIR------VLKDVAAGVLY 480
            K +K   G L LV +    GS+ + +       +L C +R+       +L     G+ +
Sbjct: 89  YKADKLVGGQLWLVLELCNGGSVTELV-----KGLLICGQRLDEAMISYILYGALLGLQH 143

Query: 481 LHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEV 540
           LH     +++HRD+K +N+LL  E   +L DFG++      ++   T  VGT  ++APEV
Sbjct: 144 LHN---NRIIHRDVKGNNILLTTEGGVKLVDFGVSAQLTSTRLRRNTS-VGTPFWMAPEV 199

Query: 541 FSSGRA-----STQTDVFGFGILILEVLSGRRPIEEGKP 574
            +  +        + DV+  GI  +E+  G  P+ +  P
Sbjct: 200 IACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDMHP 238

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also present in the brain and testis. The human class IIIB myosin gene maps to a region that overlaps the locus for Bardet-Biedl syndrome, which is characterized by dysmorphic extremities, retinal dystrophy, obesity, male hypogenitalism, and renal abnormalities. Length = 291

>gnl|CDD|173705 cd05614, STKc_MSK2_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

 Score = 60.4 bits (146), Expect = 9e-10
 Identities = 45/141 (31%), Positives = 69/141 (48%), Gaps = 8/141 (5%)

Query: 437 LMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKS 496
           L L+ DY+  G +   ++Q D       E+ +R        +L L    +  +++RDIK 
Sbjct: 80  LHLILDYVSGGEMFTHLYQRDNF----SEDEVRFY--SGEIILALEHLHKLGIVYRDIKL 133

Query: 497 SNVLLDKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVF-SSGRASTQTDVFGF 555
            N+LLD E +  L DFGL++     +   T    GT+ Y+APE+    G      D +  
Sbjct: 134 ENILLDSEGHVVLTDFGLSKEFLSEEKERTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSL 193

Query: 556 GILILEVLSGRRPIE-EGKPN 575
           GILI E+L+G  P   EG+ N
Sbjct: 194 GILIFELLTGASPFTLEGERN 214

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSK2 and MSK1 play nonredundant roles in activating histone H3 kinases, which play pivotal roles in compaction of the chromatin fiber. MSK2 is the required H3 kinase in response to stress stimuli and activation of the p38 MAPK pathway. MSK2 also plays a role in the pathogenesis of psoriasis. Length = 332

>gnl|CDD|140289 PTZ00263, PTZ00263, protein kinase A catalytic subunit; Provisional

 Score = 60.2 bits (146), Expect = 9e-10
 Identities = 43/137 (31%), Positives = 69/137 (50%), Gaps = 16/137 (11%)

Query: 480 YLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTT-RVVGTVGYLAP 538
           YLH    K +++RD+K  N+LLD + + ++ DFG A+     +V   T  + GT  YLAP
Sbjct: 133 YLHS---KDIIYRDLKPENLLLDNKGHVKVTDFGFAK-----KVPDRTFTLCGTPEYLAP 184

Query: 539 EVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLL--DALDAR 596
           EV  S       D +  G+L+ E ++G  P  +  P     ++E ++ G+L   +  D R
Sbjct: 185 EVIQSKGHGKAVDWWTMGVLLYEFIAGYPPFFDDTPF---RIYEKILAGRLKFPNWFDGR 241

Query: 597 LR--AKGGFDEDEVERV 611
            R   KG    D  +R+
Sbjct: 242 ARDLVKGLLQTDHTKRL 258

Length = 329

>gnl|CDD|173750 cd07857, STKc_MPK1, Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

 Score = 60.5 bits (147), Expect = 1e-09
 Identities = 56/219 (25%), Positives = 96/219 (43%), Gaps = 30/219 (13%)

Query: 372 IGVGGNGKV----YKGVLEGGGAEIAVKRISH--ENDGGTRAFLAEISSLGRLK-HKSLV 424
           +G G  G V         E     +A+K+I++        +  L E+  L   + HK++ 
Sbjct: 8   LGQGAYGIVCSARNAETSEE--ETVAIKKITNVFSKKILAKRALRELKLLRHFRGHKNIT 65

Query: 425 GLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIR------VLKDVAAGV 478
            L        G+   +Y Y E       + + D   ++   + +        +  +  G+
Sbjct: 66  CLYDMDIVFPGNFNELYLYEE-------LMEADLHQIIRSGQPLTDAHFQSFIYQILCGL 118

Query: 479 LYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLAR--MHGHGQVAS-TTRVVGTVGY 535
            Y+H      VLHRD+K  N+L++ +   ++ DFGLAR      G+ A   T  V T  Y
Sbjct: 119 KYIHSA---NVLHRDLKPGNLLVNADCELKICDFGLARGFSENPGENAGFMTEYVATRWY 175

Query: 536 LAPEV-FSSGRASTQTDVFGFGILILEVLSGRRPIEEGK 573
            APE+  S    +   DV+  G ++ E+L GR+P+ +GK
Sbjct: 176 RAPEIMLSFQSYTKAIDVWSVGCILAELL-GRKPVFKGK 213

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall construction, morphogenesis, and ion homeostasis. MPK1 is activated in response to cell wall stress including heat stimulation, osmotic shock, UV irradiation, and any agents that interfere with cell wall biogenesis such as chitin antagonists, caffeine, or zymolase. MPK1 is regulated by the MAP2Ks Mkk1/2, which are regulated by the MAP3K Bck1. Pmk1 is also activated by multiple stresses including elevated temperatures, hyper- or hypotonic stress, glucose deprivation, exposure to cell-wall damaging compounds, and oxidative stress. It is regulated by the MAP2K Pek1, which is regulated by the MAP3K Mkh1. Length = 332

>gnl|CDD|143373 cd07868, STKc_CDK8, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8

 Score = 60.1 bits (145), Expect = 1e-09
 Identities = 61/214 (28%), Positives = 97/214 (45%), Gaps = 32/214 (14%)

Query: 372 IGVGGNGKVYKGVLEGG--GAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRG- 428
           +G G  G VYK   + G    + A+K+I  E  G + +   EI+ L  LKH +++ L+  
Sbjct: 9   VGRGTYGHVYKAKRKDGKDDRDYALKQI--EGTGISMSACREIALLRELKHPNVISLQKV 66

Query: 429 WCKREKGSLMLVYDYMEN-----------GSLDKWIFQCDGSMMLSCEERIRVLKDVAAG 477
           +       + L++DY E+              +K   Q    M+ S      +L  +  G
Sbjct: 67  FLSHADRKVWLLFDYAEHDLWHIIKFHRASKANKKPVQLPRGMVKS------LLYQILDG 120

Query: 478 VLYLHEGWEKKVLHRDIKSSNVLLDKEMNGR----LGDFGLARMHGH--GQVASTTRVVG 531
           + YLH  W   VLHRD+K +N+L+  E   R    + D G AR+       +A    VV 
Sbjct: 121 IHYLHANW---VLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVV 177

Query: 532 TVGYLAPEVFSSGRASTQT-DVFGFGILILEVLS 564
           T  Y APE+    R  T+  D++  G +  E+L+
Sbjct: 178 TFWYRAPELLLGARHYTKAIDIWAIGCIFAELLT 211

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA polymerase II (RNAP II)-dependent transcription. CDK8 phosphorylates cyclin H, a subunit of the general transcription factor TFIIH, which results in the inhibition of TFIIH-dependent phosphorylation of the C-terminal domain (CTD) of RNAP II, facilitating the inhibition of transcription. It has also been shown to promote transcription by a mechanism that is likely to involve RNAP II phosphorylation. CDK8 also functions as a stimulus-specific positive coregulator of p53 transcriptional responses. Length = 317

>gnl|CDD|132949 cd06618, PKc_MKK7, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

 Score = 59.7 bits (145), Expect = 1e-09
 Identities = 52/162 (32%), Positives = 76/162 (46%), Gaps = 25/162 (15%)

Query: 480 YLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLA-RMHGHGQVAST--TRVVGTVGYL 536
           YL E  +  V+HRD+K SN+LLD   N +L DFG++ R+     V S   TR  G   Y+
Sbjct: 129 YLKE--KHGVIHRDVKPSNILLDASGNVKLCDFGISGRL-----VDSKAKTRSAGCAAYM 181

Query: 537 APEVF----SSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDA 592
           APE       + +   + DV+  GI ++E+ +G+ P +  K        E  V  K+L  
Sbjct: 182 APERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNCKT-------EFEVLTKILQE 234

Query: 593 LDARLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVK 634
               L    GF  D    V     LC   D R RP  R++++
Sbjct: 235 EPPSLPPNEGFSPDFCSFV----DLCLTKDHRKRPKYRELLQ 272

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates its downstream target, c-Jun N-terminal kinase (JNK), on specific threonine and tyrosine residues. Although MKK7 is capable of dual phosphorylation, it prefers to phosphorylate the threonine residue of JNK. Thus, optimal activation of JNK requires both MKK4 (not included in this subfamily) and MKK7. MKK7 is primarily activated by cytokines. MKK7 is essential for liver formation during embryogenesis. It plays roles in G2/M cell cycle arrest and cell growth. In addition, it is involved in the control of programmed cell death, which is crucial in oncogenesis, cancer chemoresistance, and antagonism to TNFalpha-induced killing, through its inhibition by Gadd45beta and the subsequent suppression of the JNK cascade. Length = 296

>gnl|CDD|173688 cd05597, STKc_DMPK_like, Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases

 Score = 59.8 bits (145), Expect = 2e-09
 Identities = 34/85 (40%), Positives = 46/85 (54%), Gaps = 7/85 (8%)

Query: 490 LHRDIKSSNVLLDKEMNGRLGDFG-LARMHGHGQVASTTRVVGTVGYLAPEVFSS----- 543
           +HRDIK  NVLLDK  + RL DFG   R+   G V S    VGT  Y++PE+  +     
Sbjct: 124 VHRDIKPDNVLLDKNGHIRLADFGSCLRLLADGTVQSNV-AVGTPDYISPEILQAMEDGK 182

Query: 544 GRASTQTDVFGFGILILEVLSGRRP 568
           GR   + D +  G+ + E+L G  P
Sbjct: 183 GRYGPECDWWSLGVCMYEMLYGETP 207

Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy, and cardiac conduction defects. The genetic basis for DM1 is the mutational expansion of a CTG repeat in the 3'-UTR of DMPK. DMPK is expressed in skeletal and cardiac muscles, and in central nervous tissues. The functional role of DMPK is not fully understood. It may play a role in the signal transduction and homeostasis of calcium. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKgamma is expressed in heart and skeletal muscles, unlike MRCKalpha and MRCKbeta, which are expressed ubiquitously. Length = 331

>gnl|CDD|173646 cd05087, PTKc_Aatyk1_Aatyk3, Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3

 Score = 58.8 bits (142), Expect = 2e-09
 Identities = 49/211 (23%), Positives = 97/211 (45%), Gaps = 18/211 (8%)

Query: 372 IGVGGNGKVYKGVLEGG--GAEIAVKRI-SHENDGGTRAFLAEISSLGRLKHKSLVGLRG 428
           IG G  GKV  G +  G   A++ VK +    +      FL E      L+H +L+   G
Sbjct: 3   IGNGWFGKVILGEVNSGYTPAQVVVKELRVSASVQEQMKFLEEAQPYRSLQHSNLLQCLG 62

Query: 429 WCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERI--RVLKDVAAGVLYLHEGWE 486
            C  E    +LV ++   G L  ++  C  + +++ +     R+  ++A G+L+LH+   
Sbjct: 63  QCT-EVTPYLLVMEFCPLGDLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHK--- 118

Query: 487 KKVLHRDIKSSNVLLDKEMNGRLGDFGLARM-HGHGQVASTTRVVGTVGYLAPEVFSSGR 545
              +H D+   N LL  ++  ++GD+GL+   +      +  ++   + ++APE+     
Sbjct: 119 NNFIHSDLALRNCLLTADLTVKIGDYGLSHNKYKEDYYVTPDQLWVPLRWIAPELVDEVH 178

Query: 546 A-------STQTDVFGFGILILEVLS-GRRP 568
                   + +++V+  G+ I E+   G +P
Sbjct: 179 GNLLVVDQTKESNVWSLGVTIWELFELGSQP 209

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells. Aatyk1 has been implicated in neural differentiation, and is a regulator of the Na-K-2Cl cotransporter, a membrane protein involved in cell proliferation and survival, epithelial transport, and blood pressure control. The function of Aatyk3 is still unknown. Length = 269

>gnl|CDD|132967 cd06636, STKc_MAP4K4_6, Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

 Score = 58.9 bits (142), Expect = 2e-09
 Identities = 61/223 (27%), Positives = 103/223 (46%), Gaps = 23/223 (10%)

Query: 366 FSEENVIGVGGNGKVYKG--VLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLKH-KS 422
           F    V+G G  G+VYKG  V  G  A I V  ++ + +   +    EI+ L +  H ++
Sbjct: 18  FELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTEDEEEEIKL---EINMLKKYSHHRN 74

Query: 423 LVGLRG-WCKR----EKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIR-VLKDVAA 476
           +    G + K+        L LV ++   GS+   +    G+ +   E+ I  + +++  
Sbjct: 75  IATYYGAFIKKSPPGHDDQLWLVMEFCGAGSVTDLVKNTKGNALK--EDWIAYICREILR 132

Query: 477 GVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYL 536
           G+ +LH     KV+HRDIK  NVLL +    +L DFG++       V      +GT  ++
Sbjct: 133 GLAHLHA---HKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDR-TVGRRNTFIGTPYWM 188

Query: 537 APEVFSSGRASTQT-----DVFGFGILILEVLSGRRPIEEGKP 574
           APEV +       T     D++  GI  +E+  G  P+ +  P
Sbjct: 189 APEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDMHP 231

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K4 is also called Nck Interacting kinase (NIK). It facilitates the activation of the MAPKs, extracellular signal-regulated kinase (ERK) 1, ERK2, and c-Jun N-terminal kinase (JNK), by phosphorylating and activating MEKK1. MAP4K4 plays a role in tumor necrosis factor (TNF) alpha-induced insulin resistance. MAP4K4 silencing in skeletal muscle cells from type II diabetic patients restores insulin-mediated glucose uptake. MAP4K4, through JNK, also plays a broad role in cell motility, which impacts inflammation, homeostasis, as well as the invasion and spread of cancer. MAP4K4 is found to be highly expressed in most tumor cell lines relative to normal tissue. MAP4K6 (also called MINK for Misshapen/NIKs-related kinase) is activated after Ras induction and mediates activation of p38 MAPK. MAP4K6 plays a role in cell cycle arrest, cytoskeleton organization, cell adhesion, and cell motility. Length = 282

>gnl|CDD|132968 cd06637, STKc_TNIK, Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

 Score = 58.6 bits (141), Expect = 2e-09
 Identities = 62/223 (27%), Positives = 104/223 (46%), Gaps = 23/223 (10%)

Query: 366 FSEENVIGVGGNGKVYKG--VLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLKH-KS 422
           F    ++G G  G+VYKG  V  G  A I V  ++ + +   +    EI+ L +  H ++
Sbjct: 8   FELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQ---EINMLKKYSHHRN 64

Query: 423 LVGLRG-WCKRE----KGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIR-VLKDVAA 476
           +    G + K+        L LV ++   GS+   I    G+ +   EE I  + +++  
Sbjct: 65  IATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLK--EEWIAYICREILR 122

Query: 477 GVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYL 536
           G+ +LH+    KV+HRDIK  NVLL +    +L DFG++       V      +GT  ++
Sbjct: 123 GLSHLHQ---HKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDR-TVGRRNTFIGTPYWM 178

Query: 537 APEVFSSGRASTQT-----DVFGFGILILEVLSGRRPIEEGKP 574
           APEV +       T     D++  GI  +E+  G  P+ +  P
Sbjct: 179 APEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHP 221

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activates the c-Jun N-terminal kinase (JNK) pathway and plays a role in regulating the actin cytoskeleton. Length = 272

>gnl|CDD|173643 cd05077, PTK_Jak1_rpt1, Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1

 Score = 58.4 bits (141), Expect = 2e-09
 Identities = 60/220 (27%), Positives = 106/220 (48%), Gaps = 26/220 (11%)

Query: 372 IGVGGNGKVYKGVL--------EGGGAEIAVKRISHENDGGTR----AFLAEISSLGRLK 419
           +G G   ++Y G+L        +G   E  +K I    D   R    AF    S + ++ 
Sbjct: 3   LGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSHRDISLAFFETASMMRQVS 62

Query: 420 HKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVL 479
           HK +V L G C R+  ++M V +++E G LD  +F    S +L+   + +V K +A+ + 
Sbjct: 63  HKHIVLLYGVCVRDVENIM-VEEFVEFGPLD--LFMHRKSDVLTTPWKFKVAKQLASALS 119

Query: 480 YLHEGWEKKVLHRDIKSSNVLLDKE-MNGRLGDFGLARMHGHG---QVASTTRVVGTVGY 535
           YL    +K ++H ++ + N+LL +E ++G  G F   ++   G    V S    V  + +
Sbjct: 120 YLE---DKDLVHGNVCTKNILLAREGIDGECGPF--IKLSDPGIPITVLSRQECVERIPW 174

Query: 536 LAPE-VFSSGRASTQTDVFGFGILILEV-LSGRRPIEEGK 573
           +APE V  S   S   D + FG  + E+  +G  P+++  
Sbjct: 175 IAPECVEDSKNLSIAADKWSFGTTLWEICYNGEIPLKDKT 214

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak1 is widely expressed in many tissues. Many cytokines are dependent on Jak1 for signaling, including those that use the shared receptor subunits common gamma chain (IL-2, IL-4, IL-7, IL-9, IL-15, IL-21) and gp130 (IL-6, IL-11, oncostatin M, G-CSF, and IFNs, among others). The many varied interactions of Jak1 and its ubiquitous expression suggest many biological roles. Jak1 is important in neurological development, as well as in lymphoid development and function. It also plays a role in the pathophysiology of cardiac hypertrophy and heart failure. A mutation in the ATP-binding site of Jak1 was identified in a human uterine leiomyosarcoma cell line, resulting in defective cytokine induction and antigen presentation, thus allowing the tumor to evade the immune system. Length = 262

>gnl|CDD|143359 cd07854, STKc_MAPK4_6, Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

 Score = 59.4 bits (144), Expect = 2e-09
 Identities = 63/215 (29%), Positives = 98/215 (45%), Gaps = 31/215 (14%)

Query: 372 IGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLV------G 425
           +G G NG V+  V       +AVK+I   +    +  L EI  + RL H ++V      G
Sbjct: 13  LGCGSNGLVFSAVDSDCDKRVAVKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVYEVLG 72

Query: 426 LRGWCKREK-------GSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLK-DVAAG 477
             G    E         S+ +V +YME   L   + Q   S     EE  R+    +  G
Sbjct: 73  PSGSDLTEDVGSLTELNSVYIVQEYMET-DLANVLEQGPLS-----EEHARLFMYQLLRG 126

Query: 478 VLYLHEGWEKKVLHRDIKSSNVLLDKE-MNGRLGDFGLARM----HGHGQVASTTRVVGT 532
           + Y+H      VLHRD+K +NV ++ E +  ++GDFGLAR+    + H    S   V  T
Sbjct: 127 LKYIHSA---NVLHRDLKPANVFINTEDLVLKIGDFGLARIVDPHYSHKGYLSEGLV--T 181

Query: 533 VGYLAPEVFSSGRASTQT-DVFGFGILILEVLSGR 566
             Y +P +  S    T+  D++  G +  E+L+G+
Sbjct: 182 KWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGK 216

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progression in certain conditions. It may also play a role in glucose-induced insulin secretion. MAPK6 and MAPK4 cooperate to regulate the activity of MAPK-activated protein kinase 5 (MK5), leading to its relocation to the cytoplasm and exclusion from the nucleus. The MAPK6/MK5 and MAPK4/MK5 pathways may play critical roles in embryonic and post-natal development. Length = 342

>gnl|CDD|173762 cd08222, STKc_Nek11, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

 Score = 58.0 bits (140), Expect = 3e-09
 Identities = 39/154 (25%), Positives = 78/154 (50%), Gaps = 9/154 (5%)

Query: 411 EISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGS-MMLSCEERIR 469
           E   L +L H ++V        E+ +  ++ +Y E   LD  + +   +   LS  +   
Sbjct: 52  EAQLLSKLDHPAIVKFHA-SFLERDAFCIITEYCEGRDLDCKLEELKHTGKTLSENQVCE 110

Query: 470 VLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLAR-MHGHGQVASTTR 528
               +  GV Y+H+   +++LHRD+K+ N+ L   +  ++GDFG++R + G   +A+T  
Sbjct: 111 WFIQLLLGVHYMHQ---RRILHRDLKAKNIFLKNNLL-KIGDFGVSRLLMGSCDLATT-- 164

Query: 529 VVGTVGYLAPEVFSSGRASTQTDVFGFGILILEV 562
             GT  Y++PE        +++D++  G ++ E+
Sbjct: 165 FTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEM 198

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M checkpoint. Nek11 may also play a role in the S-phase checkpoint as well as in DNA replication and genotoxic stress responses. Length = 260

>gnl|CDD|143384 cd07879, STKc_p38delta_MAPK13, Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

 Score = 59.1 bits (143), Expect = 3e-09
 Identities = 58/224 (25%), Positives = 111/224 (49%), Gaps = 22/224 (9%)

Query: 372 IGVGGNGKVYKGVLEGGGAEIAVKRISHENDG---GTRAFLAEISSLGRLKHKSLVGLRG 428
           +G G  G V   + +  G ++A+K++S          RA+  E++ L  ++H++++GL  
Sbjct: 23  VGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAY-RELTLLKHMQHENVIGLL- 80

Query: 429 WCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLS---CEERIRVL-KDVAAGVLYLHEG 484
               +  +  +  D  ++  L     Q D   ++     E++++ L   +  G+ Y+H  
Sbjct: 81  ----DVFTSAVSGDEFQDFYLVMPYMQTDLQKIMGHPLSEDKVQYLVYQMLCGLKYIHSA 136

Query: 485 WEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSG 544
               ++HRD+K  N+ ++++   ++ DFGLAR   H     T  VV T  Y APEV  + 
Sbjct: 137 ---GIIHRDLKPGNLAVNEDCELKILDFGLAR---HADAEMTGYVV-TRWYRAPEVILNW 189

Query: 545 RASTQT-DVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQG 587
               QT D++  G ++ E+L+G + + +GK  L ++   L V G
Sbjct: 190 MHYNQTVDIWSVGCIMAEMLTG-KTLFKGKDYLDQLTQILKVTG 232

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13, is found in skeletal muscle, heart, lung, testis, pancreas, and small intestine. It regulates microtubule function by phosphorylating Tau. It activates the c-jun promoter and plays a role in G2 cell cycle arrest. It also controls the degration of c-Myb, which is associated with myeloid leukemia and poor prognosis in colorectal cancer. p38delta is the main isoform involved in regulating the differentiation and apoptosis of keratinocytes. Length = 342

>gnl|CDD|173722 cd05633, STKc_GRK3, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3

 Score = 58.5 bits (141), Expect = 3e-09
 Identities = 41/138 (29%), Positives = 69/138 (50%), Gaps = 10/138 (7%)

Query: 437 LMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKS 496
           L  + D M  G L   + Q     + S +E      ++  G+ ++H    + V++RD+K 
Sbjct: 72  LCFILDLMNGGDLHYHLSQ---HGVFSEKEMRFYATEIILGLEHMHN---RFVVYRDLKP 125

Query: 497 SNVLLDKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRA-STQTDVFGF 555
           +N+LLD+  + R+ D GLA      +  ++   VGT GY+APEV   G A  +  D F  
Sbjct: 126 ANILLDEHGHVRISDLGLACDFSKKKPHAS---VGTHGYMAPEVLQKGTAYDSSADWFSL 182

Query: 556 GILILEVLSGRRPIEEGK 573
           G ++ ++L G  P  + K
Sbjct: 183 GCMLFKLLRGHSPFRQHK 200

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is widely expressed in many tissues. GRK3-deficient mice show a lack of olfactory receptor desensitization and altered regulation of the M2 muscarinic airway. GRK3 is involved in modulating the cholinergic response of airway smooth muscles. It also plays a role in dopamine receptor regulation. GRK3 promoter polymorphisms may be associated with bipolar disorder. Length = 279

>gnl|CDD|173713 cd05624, STKc_MRCK_beta, Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta

 Score = 58.9 bits (142), Expect = 3e-09
 Identities = 43/119 (36%), Positives = 63/119 (52%), Gaps = 13/119 (10%)

Query: 474 VAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNG--RLGDFG-LARMHGHGQVASTTRVV 530
           +A  VL +H   +   +HRDIK  NVLLD  MNG  RL DFG   +M+  G V S+   V
Sbjct: 108 IAEMVLAIHSIHQLHYVHRDIKPDNVLLD--MNGHIRLADFGSCLKMNQDGTVQSSV-AV 164

Query: 531 GTVGYLAPEVFSS-----GRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELM 584
           GT  Y++PE+  +     G+   + D +  G+ + E+L G  P      +LVE   ++M
Sbjct: 165 GTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFY--AESLVETYGKIM 221

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues. Length = 331

>gnl|CDD|173697 cd05606, STKc_beta_ARK, Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase

 Score = 58.0 bits (140), Expect = 3e-09
 Identities = 41/138 (29%), Positives = 68/138 (49%), Gaps = 10/138 (7%)

Query: 437 LMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKS 496
           L  + D M  G L   + Q     + S  E      ++  G+ ++H    + V++RD+K 
Sbjct: 72  LSFILDLMNGGDLHYHLSQ---HGVFSEAEMRFYAAEIILGLEHMHN---RFVVYRDLKP 125

Query: 497 SNVLLDKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRA-STQTDVFGF 555
           +N+LLD+  + R+ D GLA      +  ++   VGT GY+APEV   G A  +  D F  
Sbjct: 126 ANILLDEHGHVRISDLGLACDFSKKKPHAS---VGTHGYMAPEVLQKGVAYDSSADWFSL 182

Query: 556 GILILEVLSGRRPIEEGK 573
           G ++ ++L G  P  + K
Sbjct: 183 GCMLFKLLRGHSPFRQHK 200

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is composed of GRK2, GRK3, and similar proteins. GRK2 and GRK3 are both widely expressed in many tissues, although GRK2 is present at higher levels. They contain an N-terminal RGS homology (RH) domain, a central catalytic domain, and C-terminal pleckstrin homology (PH) domain that mediates PIP2 and G protein betagamma-subunit translocation to the membrane. GRK2 (also called beta-ARK or beta-ARK1) is important in regulating several cardiac receptor responses. It plays a role in cardiac development and in hypertension. Deletion of GRK2 in mice results in embryonic lethality, caused by hypoplasia of the ventricular myocardium. GRK2 also plays important roles in the liver (as a regulator of portal blood pressure), in immune cells, and in the nervous system. Altered GRK2 expression has been reported in several disorders including major depression, schizophrenia, bipolar disorder, and Parkinsonism. Length = 278

>gnl|CDD|165473 PHA03207, PHA03207, serine/threonine kinase US3; Provisional

 Score = 59.1 bits (143), Expect = 3e-09
 Identities = 31/114 (27%), Positives = 57/114 (50%), Gaps = 4/114 (3%)

Query: 457 DGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLA- 515
           D S  L  E+ I + + +   + YLH    + ++HRD+K+ N+ LD+  N  LGDFG A 
Sbjct: 177 DRSGPLPLEQAITIQRRLLEALAYLHG---RGIIHRDVKTENIFLDEPENAVLGDFGAAC 233

Query: 516 RMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPI 569
           ++  H          GT+   +PE+ +      +TD++  G+++ E+      +
Sbjct: 234 KLDAHPDTPQCYGWSGTLETNSPELLALDPYCAKTDIWSAGLVLFEMSVKNVTL 287

Length = 392

>gnl|CDD|173687 cd05596, STKc_ROCK, Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase

 Score = 59.0 bits (143), Expect = 3e-09
 Identities = 32/84 (38%), Positives = 46/84 (54%), Gaps = 6/84 (7%)

Query: 490 LHRDIKSSNVLLDKEMNGRLGDFGLA-RMHGHGQVASTTRVVGTVGYLAPEVFSS----G 544
           +HRD+K  N+LLDK  + +L DFG   +M  +G V   T  VGT  Y++PEV  S    G
Sbjct: 164 IHRDVKPDNMLLDKSGHLKLADFGTCMKMDANGMVRCDT-AVGTPDYISPEVLKSQGGDG 222

Query: 545 RASTQTDVFGFGILILEVLSGRRP 568
               + D +  G+ + E+L G  P
Sbjct: 223 YYGRECDWWSVGVFLYEMLVGDTP 246

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via interaction with Rho GTPases and is involved in many cellular functions including contraction, adhesion, migration, motility, proliferation, and apoptosis. The ROCK subfamily consists of two isoforms, ROCK1 and ROCK2, which may be functionally redundant in some systems, but exhibit different tissue distributions. Both isoforms are ubiquitously expressed in most tissues, but ROCK2 is more prominent in brain and skeletal muscle while ROCK1 is more pronounced in the liver, testes, and kidney. Studies in knockout mice result in different phenotypes, suggesting that the two isoforms do not compensate for each other during embryonic development. Length = 370

>gnl|CDD|173748 cd07853, STKc_NLK, Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase

 Score = 58.2 bits (141), Expect = 5e-09
 Identities = 38/118 (32%), Positives = 56/118 (47%), Gaps = 18/118 (15%)

Query: 477 GVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYL 536
           G+ YLH      +LHRDIK  N+L++     ++ DFGLAR+    +    T+ V T  Y 
Sbjct: 115 GLKYLHSA---GILHRDIKPGNLLVNSNCVLKICDFGLARVEEPDESKHMTQEVVTQYYR 171

Query: 537 APEVFSSGRASTQT-DVFGFGILILEVLSGR------RPIEE--------GKPNLVEM 579
           APE+    R  T   D++  G +  E+L  R       PI++        G P+L  M
Sbjct: 172 APEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLGTPSLEAM 229

Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription factors from the TCF/LEF family, inhibiting their ability to activate the transcription of target genes. In prostate cancer cells, NLK is involved in regulating androgen receptor-mediated transcription and its expression is altered during cancer progression. Length = 372

>gnl|CDD|132969 cd06638, STKc_myosinIIIA, Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

 Score = 57.3 bits (138), Expect = 7e-09
 Identities = 65/225 (28%), Positives = 104/225 (46%), Gaps = 38/225 (16%)

Query: 372 IGVGGNGKVYKGVLEGGGAEIAVKRIS--HENDGGTRAFLAEISSLGRLK-HKSLVGLRG 428
           IG G  GKV+K + +  G++ AVK +   H+ D       AE + L  L  H ++V   G
Sbjct: 26  IGKGTYGKVFKVLNKKNGSKAAVKILDPIHDID---EEIEAEYNILKALSDHPNVVKFYG 82

Query: 429 -WCKREKGS---LMLVYDYMENGSLDKWIFQCDGSMMLSCEERIR------VLKDVAAGV 478
            + K++  +   L LV +    GS+   +        L   ER+       +L +   G+
Sbjct: 83  MYYKKDVKNGDQLWLVLELCNGGSVTDLV-----KGFLKRGERMEEPIIAYILHEALMGL 137

Query: 479 LYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVAST----TRVVGTVG 534
            +LH     K +HRD+K +N+LL  E   +L DFG++      Q+ ST       VGT  
Sbjct: 138 QHLHV---NKTIHRDVKGNNILLTTEGGVKLVDFGVS-----AQLTSTRLRRNTSVGTPF 189

Query: 535 YLAPEVFSSGRASTQT-----DVFGFGILILEVLSGRRPIEEGKP 574
           ++APEV +  +    T     DV+  GI  +E+  G  P+ +  P
Sbjct: 190 WMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPLADLHP 234

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear hair cells. It is localized to the distal ends of actin-bundled structures. Mutations in human myosin IIIA are responsible for progressive nonsyndromic hearing loss. Human myosin IIIA possesses ATPase and kinase activities, and the ability to move actin filaments in a motility assay. It may function as a cellular transporter capable of moving along actin bundles in sensory cells. Length = 286

>gnl|CDD|133209 cd05078, PTK_Jak2_Jak3_rpt1, Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

 Score = 56.4 bits (136), Expect = 1e-08
 Identities = 69/285 (24%), Positives = 122/285 (42%), Gaps = 50/285 (17%)

Query: 372 IGVGGNGKVYKGVLE--GGGAEIAVKRI-------SHENDGGTRAFLAEISSLGRLKHKS 422
           +G G   K++KG+    G   E+    +       SH N   + +F    S + +L HK 
Sbjct: 3   LGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSHRN--YSESFFEAASMMSQLSHKH 60

Query: 423 LVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLH 482
           LV   G C     S+M V +Y++ GSLD ++ +    + +S   ++ V K +A  + +L 
Sbjct: 61  LVLNYGVCVCGDESIM-VQEYVKFGSLDTYLKKNKNLINISW--KLEVAKQLAWALHFLE 117

Query: 483 EGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHG---QVASTTRVVGTVGYLAPE 539
              +K + H ++ + NVLL +E + + G+    ++   G    V     ++  + ++ PE
Sbjct: 118 ---DKGLTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPGISITVLPKEILLERIPWVPPE 174

Query: 540 VFSSGRA-STQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDARLR 598
              + +  S   D + FG  + E+ SG       KP               L ALD+  +
Sbjct: 175 CIENPQNLSLAADKWSFGTTLWEIFSGGD-----KP---------------LSALDS--Q 212

Query: 599 AKGGFDEDE----VERVLHLGLL---CAYPDPRARPTMRQVVKVL 636
            K  F ED       +   L  L   C   +P  RP+ R +++ L
Sbjct: 213 KKLQFYEDRHQLPAPKWTELANLINQCMDYEPDFRPSFRAIIRDL 257

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak2 is widely expressed in many tissues while Jak3 is expressed only in hematopoietic cells. Jak2 is essential for the signaling of hormone-like cytokines such as growth hormone, erythropoietin, thrombopoietin, and prolactin, as well as some IFNs and cytokines that signal through the IL-3 and gp130 receptors. Jak3 binds the shared receptor subunit common gamma chain and thus, is essential in the signaling of cytokines that use it such as IL-2, IL-4, IL-7, IL-9, IL-15, and IL-21. Disruption of Jak2 in mice results in an embryonic lethal phenotype with multiple defects including erythropoietic and cardiac abnormalities. It is the only Jak gene that results in a lethal phenotype when disrupted in mice. A mutation in the pseudokinase domain of Jak2, V617F, is present in many myeloproliferative diseases, including almost all patients with polycythemia vera, and 50% of patients with essential thrombocytosis and myelofibrosis. Jak3 is important in lymphoid development and myeloid cell differentiation. Inactivating mutations in Jak3 have been reported in humans with severe combined immunodeficiency (SCID). Length = 258

>gnl|CDD|133233 cd05102, PTKc_VEGFR3, Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3

 Score = 56.5 bits (136), Expect = 2e-08
 Identities = 53/177 (29%), Positives = 86/177 (48%), Gaps = 18/177 (10%)

Query: 462 LSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLAR-MHGH 520
           L+ E+ I     VA G+ +L     +K +HRD+ + N+LL +    ++ DFGLAR ++  
Sbjct: 171 LTMEDLICYSFQVARGMEFLAS---RKCIHRDLAARNILLSENNVVKICDFGLARDIYKD 227

Query: 521 GQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLS-GRRPIEEGKPNLVEM 579
                       + ++APE       +TQ+DV+ FG+L+ E+ S G  P    + N    
Sbjct: 228 PDYVRKGSARLPLKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIN---- 283

Query: 580 VWELMVQGKLLDALDARLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVL 636
             E   Q +L D    R+RA       E+ R++   L C   DP+ RPT   +V++L
Sbjct: 284 --EEFCQ-RLKDG--TRMRAP-ENATPEIYRIM---LACWQGDPKERPTFSALVEIL 331

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. VEGFR3 preferentially binds the ligands VEGFC and VEGFD. VEGFR3 is essential for lymphatic endothelial cell (EC) development and function. It has been shown to regulate adaptive immunity during corneal transplantation. VEGFR3 is upregulated on blood vascular ECs in pathological conditions such as vascular tumors and the periphery of solid tumors. It plays a role in cancer progression and lymph node metastasis. Missense mutations in the VEGFR3 gene are associated with primary human lymphedema. Length = 338

>gnl|CDD|173729 cd06617, PKc_MKK3_6, Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

 Score = 55.1 bits (133), Expect = 3e-08
 Identities = 58/212 (27%), Positives = 96/212 (45%), Gaps = 25/212 (11%)

Query: 372 IGVGGNGKVYKGVLEGGGAEIAVKRI-SHENDGGTRAFLAEISSLGRLKH-KSLVGLRGW 429
           +G G  G V K      G  +AVKRI +  N    +  L ++    R       V   G 
Sbjct: 9   LGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQEQKRLLMDLDISMRSVDCPYTVTFYGA 68

Query: 430 CKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVL----YLHEGW 485
             RE G + +  + M+  SLDK+  +     +   E+   +L  +A  ++    YLH   
Sbjct: 69  LFRE-GDVWICMEVMDT-SLDKFYKKVYDKGLTIPED---ILGKIAVSIVKALEYLHS-- 121

Query: 486 EKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVA---STTRVVGTVGYLAPEVFS 542
           +  V+HRD+K SNVL+++    +L DFG++     G +    + T   G   Y+APE  +
Sbjct: 122 KLSVIHRDVKPSNVLINRNGQVKLCDFGIS-----GYLVDSVAKTIDAGCKPYMAPERIN 176

Query: 543 SGRASTQ----TDVFGFGILILEVLSGRRPIE 570
                      +DV+  GI ++E+ +GR P +
Sbjct: 177 PELNQKGYDVKSDVWSLGITMIELATGRFPYD 208

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs that phosphorylate and activate their downstream target, p38 MAPK, on specific threonine and tyrosine residues. MKK3/6 plays roles in the regulation of cell cycle progression, cytokine- and stress-induced apoptosis, oncogenic transformation, and adult tissue regeneration. In addition, MKK6 plays a critical role in osteoclast survival in inflammatory disease while MKK3 is associated with tumor invasion, progression, and poor patient survival in glioma. Length = 283

>gnl|CDD|143385 cd07880, STKc_p38gamma_MAPK12, Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

 Score = 55.7 bits (134), Expect = 3e-08
 Identities = 65/267 (24%), Positives = 125/267 (46%), Gaps = 49/267 (18%)

Query: 350 WPHRITYQEIEAATKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISH--ENDGGTRA 407
           W     Y++++           +G G  G V   +    GA++A+K++    +++   + 
Sbjct: 11  WEVPDRYRDLKQ----------VGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKR 60

Query: 408 FLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDKW--------IFQCD-G 458
              E+  L  +KH++++GL             +  +  + SLD++            D G
Sbjct: 61  AYRELRLLKHMKHENVIGL-------------LDVFTPDLSLDRFHDFYLVMPFMGTDLG 107

Query: 459 SMM----LSCEERIRVL-KDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFG 513
            +M    LS E+RI+ L   +  G+ Y+H      ++HRD+K  N+ ++++   ++ DFG
Sbjct: 108 KLMKHEKLS-EDRIQFLVYQMLKGLKYIHAA---GIIHRDLKPGNLAVNEDCELKILDFG 163

Query: 514 LARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQT-DVFGFGILILEVLSGRRPIEEG 572
           LAR         T  VV T  Y APEV  +    TQT D++  G ++ E+L+G +P+ +G
Sbjct: 164 LAR---QTDSEMTGYVV-TRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTG-KPLFKG 218

Query: 573 KPNLVEMVWELMVQGKLLDALDARLRA 599
             +L +++  + V G        +L++
Sbjct: 219 HDHLDQLMEIMKVTGTPSKEFVQKLQS 245

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12, is predominantly expressed in skeletal muscle. Unlike p38alpha and p38beta, p38gamma is insensitive to pyridinylimidazoles. It displays an antagonizing function compared to p38alpha. p38gamma inhibits, while p38alpha stimulates, c-Jun phosphorylation and AP-1 mediated transcription. p38gamma also plays a role in the signaling between Ras and the estrogen receptor and has been implicated to increase cell invasion and breast cancer progression. In Xenopus, p38gamma is critical in the meiotic maturation of oocytes. Length = 343

>gnl|CDD|173676 cd05585, STKc_YPK1_like, Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

 Score = 54.9 bits (132), Expect = 5e-08
 Identities = 63/216 (29%), Positives = 98/216 (45%), Gaps = 21/216 (9%)

Query: 409 LAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERI 468
           LAE + L ++    +V L+ +  +    L LV  ++  G L   + Q +G   LS   R 
Sbjct: 41  LAERTVLAQVNCPFIVPLK-FSFQSPEKLYLVLAFINGGELFHHL-QREGRFDLS---RA 95

Query: 469 RVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTR 528
           R     A  +  L    +  V++RD+K  N+LLD + +  L DFGL +++       T  
Sbjct: 96  RFY--TAELLCALENLHKFNVIYRDLKPENILLDYQGHIALCDFGLCKLN-MKDDDKTNT 152

Query: 529 VVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGK 588
             GT  YLAPE+      +   D +  G+L+ E+L+G  P  +   N+ EM  ++     
Sbjct: 153 FCGTPEYLAPELLLGHGYTKAVDWWTLGVLLYEMLTGLPPFYD--ENVNEMYRKI----- 205

Query: 589 LLDALDARLRAKGGFDEDEVERVLHLGLLCAYPDPR 624
               L   LR   GFD D   + L +GLL   P  R
Sbjct: 206 ----LQEPLRFPDGFDRD--AKDLLIGLLSRDPTRR 235

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It plays a role in cell growth and sexual development. Length = 312

>gnl|CDD|143356 cd07851, STKc_p38, Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

 Score = 55.0 bits (133), Expect = 5e-08
 Identities = 51/207 (24%), Positives = 95/207 (45%), Gaps = 16/207 (7%)

Query: 366 FSEENVIGVGGNGKVYKGVLEGGGAEIAVKRIS---HENDGGTRAFLAEISSLGRLKHKS 422
           +   + +G G  G+V        G ++A+K++S          R +  E+  L  + H++
Sbjct: 17  YQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTY-RELRLLKHMDHEN 75

Query: 423 LVGLRGWCKREKGSLMLVYD-YMENGSLDKWIFQCDGSMMLSCEERIRVL-KDVAAGVLY 480
           ++GL         SL    D Y+    +   +        LS ++ I+ L   +  G+ Y
Sbjct: 76  VIGLLD-VFTPASSLEDFQDVYLVTHLMGADLNNIVKCQKLS-DDHIQFLVYQILRGLKY 133

Query: 481 LHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEV 540
           +H      ++HRD+K SN+ ++++   ++ DFGLAR          T  V T  Y APE+
Sbjct: 134 IHSA---GIIHRDLKPSNIAVNEDCELKILDFGLARHTDD----EMTGYVATRWYRAPEI 186

Query: 541 FSSGRASTQT-DVFGFGILILEVLSGR 566
             +     QT D++  G ++ E+L+G+
Sbjct: 187 MLNWMHYNQTVDIWSVGCIMAELLTGK 213

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. p38 substrates include other protein kinases and factors that regulate transcription, nuclear export, mRNA stability and translation. p38 kinases are drug targets for the inflammatory diseases psoriasis, rheumatoid arthritis, and chronic pulmonary disease. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta, which show varying substrate specificity and expression patterns. p38alpha and p38beta are ubiquitously expressed, p38gamma is predominantly found in skeletal muscle, and p38delta is found in the heart, lung, testis, pancreas, and small intestine. Length = 343

>gnl|CDD|173693 cd05602, STKc_SGK1, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

 Score = 55.0 bits (132), Expect = 5e-08
 Identities = 48/155 (30%), Positives = 74/155 (47%), Gaps = 10/155 (6%)

Query: 415 LGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLK-D 473
           L  +KH  LVGL  +  +    L  V DY+  G L  +  Q +   +   E R R    +
Sbjct: 50  LKNVKHPFLVGLH-FSFQTADKLYFVLDYINGGEL-FYHLQRERCFL---EPRARFYAAE 104

Query: 474 VAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRVVGTV 533
           +A+ + YLH      +++RD+K  N+LLD + +  L DFGL + +      +T+   GT 
Sbjct: 105 IASALGYLHS---LNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHN-GTTSTFCGTP 160

Query: 534 GYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRP 568
            YLAPEV          D +  G ++ E+L G  P
Sbjct: 161 EYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPP 195

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt sensitivity, memory consolidation, and cardiac repolarization. A common SGK1 variant is associated with increased blood pressure and body weight. SGK1 may also contribute to tumor growth, neurodegeneration, fibrosing disease, and ischemia. Length = 325

>gnl|CDD|173675 cd05584, STKc_p70S6K, Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

 Score = 54.8 bits (132), Expect = 5e-08
 Identities = 60/211 (28%), Positives = 99/211 (46%), Gaps = 27/211 (12%)

Query: 371 VIGVGGNGKVYKGVLEGG---GAEIAVKRISH----ENDGGTRAFLAEISSLGRLKHKSL 423
           V+G GG GKV++     G   G   A+K +       N   T    AE + L  +KH  +
Sbjct: 3   VLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFI 62

Query: 424 VGLRGWCKREKGSLMLVYDYMENGSL-----DKWIFQCDGSMMLSCEERIRVLKDVAAGV 478
           V L  +  +  G L L+ +Y+  G L      + IF  D +           L +++  +
Sbjct: 63  VDLI-YAFQTGGKLYLILEYLSGGELFMHLEREGIFMEDTACFY--------LSEISLAL 113

Query: 479 LYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGH-GQVASTTRVVGTVGYLA 537
            +LH+   + +++RD+K  N+LLD + + +L DFGL +   H G V  T    GT+ Y+A
Sbjct: 114 EHLHQ---QGIIYRDLKPENILLDAQGHVKLTDFGLCKESIHEGTVTHT--FCGTIEYMA 168

Query: 538 PEVFSSGRASTQTDVFGFGILILEVLSGRRP 568
           PE+          D +  G L+ ++L+G  P
Sbjct: 169 PEILMRSGHGKAVDWWSLGALMYDMLTGAPP 199

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the insulin receptor substrate IRS-1, among others. Mammals contain two isoforms of p70S6K, named S6K1 and S6K2 (or S6K-beta). Length = 323

>gnl|CDD|133207 cd05076, PTK_Tyk2_rpt1, Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

 Score = 54.1 bits (130), Expect = 7e-08
 Identities = 56/239 (23%), Positives = 105/239 (43%), Gaps = 36/239 (15%)

Query: 407 AFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEE 466
           AF    S + ++ H  L  + G C R   ++M V +++E+G LD  + +  G + +    
Sbjct: 62  AFFETASLMSQVSHIHLAFVHGVCVRGSENIM-VEEFVEHGPLDVCLRKEKGRVPV--AW 118

Query: 467 RIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNG-------RLGDFGLARMHG 519
           +I V + +A+ + YL    +K ++H ++ + N+LL +           +L D G+     
Sbjct: 119 KITVAQQLASALSYLE---DKNLVHGNVCAKNILLARLGLAEGTSPFIKLSDPGV----S 171

Query: 520 HGQVASTTRVVGTVGYLAPEVFSSGRA-STQTDVFGFGILILEV-LSGRRPIEEGKPNLV 577
              ++   R V  + ++APE    G + ST  D + FG  +LE+   G  P++E  P+  
Sbjct: 172 FTALSREER-VERIPWIAPECVPGGNSLSTAADKWSFGTTLLEICFDGEVPLKERTPSEK 230

Query: 578 EMVWELMVQGKLLDALDARLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVL 636
           E  +E                 K    E   + +  L   C   +P  RP+ R +++ L
Sbjct: 231 ERFYE----------------KKHRLPEPSCKELATLISQCLTYEPTQRPSFRTILRDL 273

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Tyk2 is widely expressed in many tissues. It is involved in signaling via the cytokine receptors IFN-alphabeta, IL-6, IL-10, IL-12, IL-13, and IL-23. It mediates cell surface urokinase receptor (uPAR) signaling and plays a role in modulating vascular smooth muscle cell (VSMC) functional behavior in response to injury. Tyk2 is also important in dendritic cell function and T helper (Th)1 cell differentiation. A homozygous mutation of Tyk2 was found in a patient with hyper-IgE syndrome (HIES), a primary immunodeficiency characterized by recurrent skin abscesses, pneumonia, and elevated serum IgE. This suggests that Tyk2 may play important roles in multiple cytokine signaling involved in innate and adaptive immunity. Length = 274

>gnl|CDD|143361 cd07856, STKc_Sty1_Hog1, Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

 Score = 54.4 bits (131), Expect = 9e-08
 Identities = 32/98 (32%), Positives = 54/98 (55%), Gaps = 9/98 (9%)

Query: 477 GVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYL 536
           G+ Y+H      V+HRD+K SN+L+++  + ++ DFGLAR+         T  V T  Y 
Sbjct: 120 GLKYVHSA---GVVHRDLKPSNILINENCDLKICDFGLARIQDP----QMTGYVSTRYYR 172

Query: 537 APEV-FSSGRASTQTDVFGFGILILEVLSGRRPIEEGK 573
           APE+  +  +   + D++  G +  E+L G +P+  GK
Sbjct: 173 APEIMLTWQKYDVEVDIWSAGCIFAEMLEG-KPLFPGK 209

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and UV radiation. Sty1 is regulated by the MAP2K Wis1, which is activated by the MAP3Ks Wis4 and Win1, which receive signals of the stress condition from membrane-spanning histidine kinases Mak1-3. Activated Sty1 stabilizes the Atf1 transcription factor and induces transcription of Atf1-dependent genes of the core environmetal stress response (CESR). Hog1 is the key element in the high osmolarity glycerol (HOG) pathway and is activated upon hyperosmotic stress. Activated Hog1 accumulates in the nucleus and regulates stress-induced transcription. The HOG pathway is mediated by two transmembrane osmosensors, Sln1 and Sho1. Length = 328

>gnl|CDD|173653 cd05105, PTKc_PDGFR_alpha, Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha

 Score = 53.9 bits (129), Expect = 2e-07
 Identities = 37/110 (33%), Positives = 59/110 (53%), Gaps = 6/110 (5%)

Query: 457 DGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLAR 516
           DGS  L+  + +     VA G+ +L     K  +HRD+ + NVLL +    ++ DFGLAR
Sbjct: 229 DGSEGLTTLDLLSFTYQVARGMEFLAS---KNCVHRDLAARNVLLAQGKIVKICDFGLAR 285

Query: 517 --MHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLS 564
             MH    V+  +  +  V ++APE       +T +DV+ +GIL+ E+ S
Sbjct: 286 DIMHDSNYVSKGSTFL-PVKWMAPESIFDNLYTTLSDVWSYGILLWEIFS 334

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-AB, and PDGF-CC induce PDGFR alpha homodimerization. PDGFR signaling plays many roles in normal embryonic development and adult physiology. PDGFR alpha signaling is important in the formation of lung alveoli, intestinal villi, mesenchymal dermis, and hair follicles, as well as in the development of oligodendrocytes, retinal astrocytes, neural crest cells, and testicular cells. Aberrant PDGFR alpha expression is associated with some human cancers. Mutations in PDGFR alpha have been found within a subset of gastrointestinal stromal tumors (GISTs). An active fusion protein FIP1L1-PDGFR alpha, derived from interstitial deletion, is associated with idiopathic hypereosinophilic syndrome (HES) and chronic eosinophilic leukemia (CEL). Length = 400

>gnl|CDD|173704 cd05613, STKc_MSK1_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1

 Score = 53.1 bits (127), Expect = 2e-07
 Identities = 37/134 (27%), Positives = 63/134 (47%), Gaps = 8/134 (5%)

Query: 437 LMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKS 496
           L L+ DY+  G L   + Q         +E      ++   + +LH+     +++RDIK 
Sbjct: 80  LHLILDYINGGELFTHLSQ---RERFKEQEVQIYSGEIVLALEHLHK---LGIIYRDIKL 133

Query: 497 SNVLLDKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRA--STQTDVFG 554
            N+LLD   +  L DFGL++     +V       GT+ Y+AP++   G        D + 
Sbjct: 134 ENILLDSNGHVVLTDFGLSKEFHEDEVERAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWS 193

Query: 555 FGILILEVLSGRRP 568
            G+L+ E+L+G  P
Sbjct: 194 MGVLMYELLTGASP 207

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSK1 plays a role in the regulation of translational control and transcriptional activation. It phosphorylates the transcription factors, CREB and NFkappaB. It also phosphorylates the nucleosomal proteins H3 and HMG-14. Increased phosphorylation of MEK1 is associated with the development of cerebral ischemic/hypoxic preconditioning. Length = 290

>gnl|CDD|143381 cd07876, STKc_JNK2, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2

 Score = 53.5 bits (128), Expect = 2e-07
 Identities = 58/213 (27%), Positives = 93/213 (43%), Gaps = 26/213 (12%)

Query: 364 KGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLA--EISSLGRLKHK 421
           K + +   IG G  G V        G  +AVK++S      T A  A  E+  L  + HK
Sbjct: 21  KRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHK 80

Query: 422 SLVGLRGWCKREKG-----SLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAA 476
           +++ L      +K       + LV + M+  +L + I      M L  E    +L  +  
Sbjct: 81  NIISLLNVFTPQKSLEEFQDVYLVMELMD-ANLCQVI-----HMELDHERMSYLLYQMLC 134

Query: 477 GVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVAST----TRVVGT 532
           G+ +LH      ++HRD+K SN+++  +   ++ DFGLAR       A T    T  V T
Sbjct: 135 GIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLAR------TACTNFMMTPYVVT 185

Query: 533 VGYLAPEVFSSGRASTQTDVFGFGILILEVLSG 565
             Y APEV          D++  G ++ E++ G
Sbjct: 186 RYYRAPEVILGMGYKENVDIWSVGCIMGELVKG 218

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jnk1 or Jnk2) could survive but disruption of both genes resulted in lethality. However, recent studies have shown that JNK1 and JNK2 perform distinct functions through specific binding partners and substrates. JNK2 is specifically translocated to the mitochondria during dopaminergic cell death. Specific substrates include the microtubule-associated proteins DCX and Tau, as well as TIF-IA which is involved in ribosomal RNA synthesis regulation. Mice deficient in Jnk2 show protection against arthritis, type 1 diabetes, atherosclerosis, abdominal aortic aneurysm, cardiac cell death, TNF-induced liver damage, and tumor growth, indicating that JNK2 may play roles in the pathogenesis of these diseases. Length = 359

>gnl|CDD|143380 cd07875, STKc_JNK1, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1

 Score = 53.1 bits (127), Expect = 2e-07
 Identities = 58/202 (28%), Positives = 92/202 (45%), Gaps = 18/202 (8%)

Query: 372 IGVGGNGKV---YKGVLEGGGAEIAVKRISHENDGGTRAFLA--EISSLGRLKHKSLVGL 426
           IG G  G V   Y  +LE     +A+K++S      T A  A  E+  +  + HK+++GL
Sbjct: 32  IGSGAQGIVCAAYDAILE---RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGL 88

Query: 427 RGWCKREKG--SLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEG 484
                 +K       VY  ME   +D  + Q    M L  E    +L  +  G+ +LH  
Sbjct: 89  LNVFTPQKSLEEFQDVYIVME--LMDANLCQVI-QMELDHERMSYLLYQMLCGIKHLHSA 145

Query: 485 WEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSG 544
               ++HRD+K SN+++  +   ++ DFGLAR  G   +   T  V T  Y APEV    
Sbjct: 146 ---GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFM--MTPYVVTRYYRAPEVILGM 200

Query: 545 RASTQTDVFGFGILILEVLSGR 566
                 D++  G ++ E++ G 
Sbjct: 201 GYKENVDIWSVGCIMGEMIKGG 222

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jnk1 or Jnk2) could survive but disruption of both genes resulted in lethality. However, recent studies have shown that JNK1 and JNK2 perform distinct functions through specific binding partners and substrates. JNK1 specifically binds with JAMP (JNK1-associated membrane protein), which regulates the duration of JNK1 activity in response to stimuli. Specific JNK1 substrates include Itch and SG10, which are implicated in Th2 responses and airway inflammation, and microtubule dynamics and axodendritic length, respectively. Mice deficient in Jnk1 are protected against arthritis, obesity, type 2 diabetes, cardiac cell death, and non-alcoholic liver disease, suggesting that JNK1 may play roles in the pathogenesis of these diseases. Length = 364

>gnl|CDD|173712 cd05622, STKc_ROCK1, Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1

 Score = 52.7 bits (126), Expect = 3e-07
 Identities = 32/84 (38%), Positives = 46/84 (54%), Gaps = 6/84 (7%)

Query: 490 LHRDIKSSNVLLDKEMNGRLGDFGLA-RMHGHGQVASTTRVVGTVGYLAPEVFSS----G 544
           +HRD+K  N+LLDK  + +L DFG   +M+  G V   T  VGT  Y++PEV  S    G
Sbjct: 164 IHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDT-AVGTPDYISPEVLKSQGGDG 222

Query: 545 RASTQTDVFGFGILILEVLSGRRP 568
               + D +  G+ + E+L G  P
Sbjct: 223 YYGRECDWWSVGVFLYEMLVGDTP 246

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, and kidney. It mediates signaling from Rho to the actin cytoskeleton. It is implicated in the development of cardiac fibrosis, cardiomyocyte apoptosis, and hyperglycemia. Mice deficient with ROCK1 display eyelids open at birth (EOB) and omphalocele phenotypes due to the disorganization of actin filaments in the eyelids and the umbilical ring. Length = 371

>gnl|CDD|173502 PTZ00266, PTZ00266, NIMA-related protein kinase; Provisional

 Score = 53.6 bits (128), Expect = 3e-07
 Identities = 51/199 (25%), Positives = 95/199 (47%), Gaps = 30/199 (15%)

Query: 411 EISSLGRLKHKSLVG-LRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEER-- 467
           E++ +  LKHK++V  +  +  +    L ++ ++ + G L + I +C   M    EE   
Sbjct: 62  EVNVMRELKHKNIVRYIDRFLNKANQKLYILMEFCDAGDLSRNIQKC-YKMFGKIEEHAI 120

Query: 468 IRVLKDVAAGVLYLHEGWE----KKVLHRDIKSSNVLLD-------------KEMNGR-- 508
           + + + +   + Y H   +    ++VLHRD+K  N+ L                +NGR  
Sbjct: 121 VDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHIGKITAQANNLNGRPI 180

Query: 509 --LGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRAS--TQTDVFGFGILILEVLS 564
             +GDFGL++  G   +A +   VGT  Y +PE+      S   ++D++  G +I E+ S
Sbjct: 181 AKIGDFGLSKNIGIESMAHS--CVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCS 238

Query: 565 GRRPIEEGKPNLVEMVWEL 583
           G+ P  +   N  +++ EL
Sbjct: 239 GKTPFHKAN-NFSQLISEL 256

Length = 1021

>gnl|CDD|133237 cd05106, PTKc_CSF-1R, Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor

 Score = 52.5 bits (126), Expect = 4e-07
 Identities = 51/186 (27%), Positives = 87/186 (46%), Gaps = 24/186 (12%)

Query: 457 DGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLAR 516
           + S  L  ++ +R    VA G+ +L     K  +HRD+ + NVLL      ++ DFGLAR
Sbjct: 204 EDSWPLDLDDLLRFSSQVAQGMDFLAS---KNCIHRDVAARNVLLTDGRVAKICDFGLAR 260

Query: 517 --MHGHGQVAS-TTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLS-GRRPIEEG 572
             M+    V     R+   V ++APE       + Q+DV+ +GIL+ E+ S G+ P    
Sbjct: 261 DIMNDSNYVVKGNARL--PVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGKSPY--- 315

Query: 573 KPN-LVEMVWELMVQGKLLDALDARLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQ 631
            P  LV   +  MV+            ++  F   E+  ++    +C   +P  RPT  Q
Sbjct: 316 -PGILVNSKFYKMVK-------RGYQMSRPDFAPPEIYSIMK---MCWNLEPTERPTFSQ 364

Query: 632 VVKVLE 637
           + ++++
Sbjct: 365 ISQLIQ 370

Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is critical in the regulation of macrophages and osteoclasts. It leads to increases in gene transcription and protein translation, and induces cytoskeletal remodeling. CSF-1R signaling leads to a variety of cellular responses including survival, proliferation, and differentiation of target cells. It plays an important role in innate immunity, tissue development and function, and the pathogenesis of some diseases including atherosclerosis and cancer. CSF-1R signaling is also implicated in mammary gland development during pregnancy and lactation. Aberrant CSF-1/CSF-1R expression correlates with tumor cell invasiveness, poor clinical prognosis, and bone metastasis in breast cancer. Although the structure of the human CSF-1R catalytic domain is known, it is excluded from this specific alignment model because it contains a deletion in its sequence. Length = 374

>gnl|CDD|173711 cd05621, STKc_ROCK2, Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2

 Score = 52.3 bits (125), Expect = 4e-07
 Identities = 32/85 (37%), Positives = 46/85 (54%), Gaps = 6/85 (7%)

Query: 489 VLHRDIKSSNVLLDKEMNGRLGDFGLA-RMHGHGQVASTTRVVGTVGYLAPEVFSS---- 543
           ++HRD+K  N+LLDK  + +L DFG   +M   G V   T  VGT  Y++PEV  S    
Sbjct: 163 LIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETGMVRCDT-AVGTPDYISPEVLKSQGGD 221

Query: 544 GRASTQTDVFGFGILILEVLSGRRP 568
           G    + D +  G+ + E+L G  P
Sbjct: 222 GYYGRECDWWSVGVFLFEMLVGDTP 246

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found to play a role in stress fiber and focal adhesion formation. It is prominently expressed in the brain, heart, and skeletal muscles. It is implicated in vascular and neurological disorders, such as hypertension and vasospasm of the coronary and cerebral arteries. ROCK2 is also activated by caspase-2 cleavage, resulting in thrombin-induced microparticle generation in response to cell activation. Mice deficient in ROCK2 show intrauterine growth retardation and embryonic lethality because of placental dysfunction. Length = 370

>gnl|CDD|88524 cd05623, STKc_MRCK_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha

 Score = 52.0 bits (124), Expect = 5e-07
 Identities = 36/103 (34%), Positives = 55/103 (53%), Gaps = 13/103 (12%)

Query: 490 LHRDIKSSNVLLDKEMNG--RLGDFG-LARMHGHGQVASTTRVVGTVGYLAPEVFSS--- 543
           +HRDIK  N+L+D  MNG  RL DFG   ++   G V S+   VGT  Y++PE+  +   
Sbjct: 124 VHRDIKPDNILMD--MNGHIRLADFGSCLKLMEDGTVQSSV-AVGTPDYISPEILQAMED 180

Query: 544 --GRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELM 584
             G+   + D +  G+ + E+L G  P      +LVE   ++M
Sbjct: 181 GKGKYGPECDWWSLGVCMYEMLYGETPFY--AESLVETYGKIM 221

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathway. Length = 332

>gnl|CDD|143382 cd07877, STKc_p38alpha_MAPK14, Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

 Score = 52.0 bits (124), Expect = 5e-07
 Identities = 55/203 (27%), Positives = 95/203 (46%), Gaps = 20/203 (9%)

Query: 372 IGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRA--FLAEISSLGRLKHKSLVGL--- 426
           +G G  G V        G  +AVK++S        A     E+  L  +KH++++GL   
Sbjct: 25  VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 84

Query: 427 --RGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEG 484
                   E   + LV   M  G+    I +C     L+ +    ++  +  G+ Y+H  
Sbjct: 85  FTPARSLEEFNDVYLVTHLM--GADLNNIVKCQ---KLTDDHVQFLIYQILRGLKYIHSA 139

Query: 485 WEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSG 544
               ++HRD+K SN+ ++++   ++ DFGLAR H   ++   T  V T  Y APE+  + 
Sbjct: 140 ---DIIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEM---TGYVATRWYRAPEIMLNW 192

Query: 545 RASTQT-DVFGFGILILEVLSGR 566
               QT D++  G ++ E+L+GR
Sbjct: 193 MHYNQTVDIWSVGCIMAELLTGR 215

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14, is expressed in most tissues and is the major isoform involved in the immune and inflammatory response. It is the central p38 MAPK involved in myogenesis. It plays a role in regulating cell cycle check-point transition and promoting cell differentiation. p38alpha also regulates cell proliferation and death through crosstalk with the JNK pathway. Its substrates include MAPK activated protein kinase 2 (MK2), MK5, and the transcription factors ATF2 and Mitf. Length = 345

>gnl|CDD|133240 cd05109, PTKc_HER2, Catalytic domain of the Protein Tyrosine Kinase, HER2

 Score = 51.2 bits (122), Expect = 6e-07
 Identities = 61/266 (22%), Positives = 116/266 (43%), Gaps = 46/266 (17%)

Query: 371 VIGVGGNGKVYKGVLEGGGAEIAVK---RISHENDG--GTRAFLAEISSLGRLKHKSLVG 425
           V+G G  G VYKG+    G  + +    ++  EN      +  L E   +  +    +  
Sbjct: 14  VLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVCR 73

Query: 426 LRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGW 485
           L G C     ++ LV   M  G L  ++ +      +  ++ +     +A G+ YL E  
Sbjct: 74  LLGICL--TSTVQLVTQLMPYGCLLDYVRENKDR--IGSQDLLNWCVQIAKGMSYLEE-- 127

Query: 486 EKKVLHRDIKSSNVLLDKEMNGRLGDFGLARM--------HGHGQVASTTRVVGTVGYLA 537
             +++HRD+ + NVL+    + ++ DFGLAR+        H  G           + ++A
Sbjct: 128 -VRLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGKVP-------IKWMA 179

Query: 538 PEVFSSGRASTQTDVFGFGILILEVLS-GRRP------------IEEGK-----PNLVEM 579
            E     R + Q+DV+ +G+ + E+++ G +P            +E+G+     P     
Sbjct: 180 LESILHRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPAREIPDLLEKGERLPQPPICTID 239

Query: 580 VWELMVQGKLLDALDARLRAKGGFDE 605
           V+ +MV+  ++D+ + R R +   DE
Sbjct: 240 VYMIMVKCWMIDS-ECRPRFRELVDE 264

Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. HER2 does not bind to any known EGFR subfamily ligands, but contributes to the kinase activity of all possible heterodimers. It acts as the preferred partner with other ligand-bound EGFR proteins and functions as a signal amplifier, with the HER2-HER3 heterodimer being the most potent pair in mitogenic signaling. HER2 plays an important role in cell development, proliferation, survival and motility. Overexpression of HER2 results in its activation and downstream signaling, even in the absence of ligand. HER2 overexpression, mainly due to gene amplification, has been shown in a variety of human cancers. Its role in breast cancer is especially well-documented. HER2 is up-regulated in about 25% of breast tumors and is associated with increases in tumor aggressiveness, recurrence and mortality. HER2 is a target for monoclonal antibodies and small molecule inhibitors, which are being developed as treatments for cancer. The first humanized antibody approved for clinical use is Trastuzumab (Herceptin), which is being used in combination with other therapies to improve the survival rates of patients with HER2-overexpressing breast cancer. Length = 279

>gnl|CDD|173664 cd05573, STKc_ROCK_NDR_like, Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

 Score = 51.5 bits (124), Expect = 7e-07
 Identities = 28/107 (26%), Positives = 43/107 (40%), Gaps = 28/107 (26%)

Query: 490 LHRDIKSSNVLLDKEMNGRLGDFGLA-RMHGHGQVASTTR-------------------- 528
           +HRDIK  N+L+D + + +L DFGL  +M+                              
Sbjct: 123 IHRDIKPDNILIDADGHIKLADFGLCKKMNKAKDREYYLNDSHNLLFRDNVLVRRRDHKQ 182

Query: 529 -------VVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRP 568
                   VGT  Y+APEV        + D +  G+++ E+L G  P
Sbjct: 183 RRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYEMLYGFPP 229

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Proteins in this subfamily are involved in regulating many cellular functions including contraction, motility, division, proliferation, apoptosis, morphogenesis, and cytokinesis. Length = 350

>gnl|CDD|133235 cd05104, PTKc_Kit, Catalytic domain of the Protein Tyrosine Kinase, Kit

 Score = 51.4 bits (123), Expect = 8e-07
 Identities = 47/188 (25%), Positives = 90/188 (47%), Gaps = 22/188 (11%)

Query: 457 DGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLAR 516
           +  + L  E+ +     VA G+ +L     K  +HRD+ + N+LL      ++ DFGLAR
Sbjct: 206 EDELALDTEDLLSFSYQVAKGMSFLAS---KNCIHRDLAARNILLTHGRITKICDFGLAR 262

Query: 517 ---MHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLS-GRRPIEEG 572
                 +  V    R+   V ++APE   +   + ++DV+ +GIL+ E+ S G  P   G
Sbjct: 263 DIRNDSNYVVKGNARL--PVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSSPY-PG 319

Query: 573 KPNLVEMVWELMVQGKLLDALDARLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQV 632
            P +    ++++ +G  + + +            E+  ++     C   DP  RPT +Q+
Sbjct: 320 MP-VDSKFYKMIKEGYRMLSPE--------CAPSEMYDIMK---SCWDADPLKRPTFKQI 367

Query: 633 VKVLEGKI 640
           V+++E ++
Sbjct: 368 VQLIEQQL 375

Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem cells, the interstitial cells of Cajal, and the pacemaker cells of the GI tract. Kit signaling is involved in major cellular functions including cell survival, proliferation, differentiation, adhesion, and chemotaxis. Mutations in Kit, which result in constitutive ligand-independent activation, are found in human cancers such as gastrointestinal stromal tumor (GIST) and testicular germ cell tumor (TGCT). The aberrant expression of Kit and/or SCF is associated with other tumor types such as systemic mastocytosis and cancers of the breast, neurons, lung, prostate, colon, and rectum. Although the structure of the human Kit catalytic domain is known, it is excluded from this specific alignment model because it contains a deletion in its sequence. Length = 375

>gnl|CDD|173654 cd05108, PTKc_EGFR, Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor

 Score = 51.1 bits (122), Expect = 9e-07
 Identities = 71/323 (21%), Positives = 140/323 (43%), Gaps = 48/323 (14%)

Query: 366 FSEENVIGVGGNGKVYKG--VLEGGGAEI--AVKRISHEND-GGTRAFLAEISSLGRLKH 420
           F +  V+G G  G VYKG  + EG   +I  A+K +         +  L E   +  + +
Sbjct: 9   FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 68

Query: 421 KSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQ-----CDGSMMLSCEERIRVLKDVA 475
             +  L G C     ++ L+   M  G L  ++ +         ++  C +       +A
Sbjct: 69  PHVCRLLGICL--TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ-------IA 119

Query: 476 AGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQV---ASTTRVVGT 532
            G+ YL E   ++++HRD+ + NVL+    + ++ DFGLA++ G  +    A   +V   
Sbjct: 120 KGMNYLEE---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGADEKEYHAEGGKV--P 174

Query: 533 VGYLAPEVFSSGRASTQTDVFGFGILILEVLS-GRRP------------IEEGK-----P 574
           + ++A E       + Q+DV+ +G+ + E+++ G +P            +E+G+     P
Sbjct: 175 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPP 234

Query: 575 NLVEMVWELMVQGKLLDALDARLRAKGGFDE-DEVERVLHLGLLCAYPDPRARPTMRQVV 633
                V+ +MV+  ++DA D+R + +    E  ++ R     L+    +    P+     
Sbjct: 235 ICTIDVYMIMVKCWMIDA-DSRPKFRELIIEFSKMARDPQRYLVIQGDERMHLPSPTDSN 293

Query: 634 KVLEGKIEAGIENETEDMDAYLL 656
                  E  ++ +  D D YL+
Sbjct: 294 FYRALMDEEDMD-DVVDADEYLI 315

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Ligands for EGFR include EGF, heparin binding EGF-like growth factor (HBEGF), epiregulin, amphiregulin, TGFalpha, and betacellulin. Upon ligand binding, EGFR can form homo- or heterodimers with other EGFR subfamily members. The EGFR signaling pathway is one of the most important pathways regulating cell proliferation, differentiation, survival, and growth. Overexpression and mutation in the kinase domain of EGFR have been implicated in the development and progression of a variety of cancers. A number of monoclonal antibodies and small molecule inhibitors have been developed that target EGFR, including the antibodies Cetuximab and Panitumumab, which are used in combination with other therapies for the treatment of colorectal cancer and non-small cell lung carcinoma (NSCLC). The small molecule inhibitors Gefitinib (Iressa) and Erlotinib (Tarceva), already used for NSCLC, are undergoing clinical trials for other types of cancer including gastrointestinal, breast, head and neck, and bladder. Length = 316

>gnl|CDD|173665 cd05574, STKc_phototropin_like, Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases

 Score = 50.7 bits (122), Expect = 1e-06
 Identities = 61/231 (26%), Positives = 92/231 (39%), Gaps = 40/231 (17%)

Query: 371 VIGVGGNGKVYKGVLEGGGAEIAVKRISHE---NDGGTRAFLAEISSLGRLKHKSLVGLR 427
           ++G G  G+V+   L+G G   A+K +  +        +  L E   L  L H  L  L 
Sbjct: 8   LLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLY 67

Query: 428 GWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRV-LKDVAAGVLYLH-EGW 485
              + E   L LV DY   G L + + +  G  +   EE  R    +V   + YLH  G 
Sbjct: 68  ASFQTET-YLCLVMDYCPGGELFRLLQRQPGKCL--SEEVARFYAAEVLLALEYLHLLG- 123

Query: 486 EKKVLHRDIKSSNVLLDKEMNGRLGDFGL---------ARMHGHGQVASTTRV------- 529
              +++RD+K  N+LL +  +  L DF L                + +  + V       
Sbjct: 124 ---IVYRDLKPENILLHESGHIMLSDFDLSKQSDVEPPPVSKALRKGSRRSSVNSIPSET 180

Query: 530 ------------VGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRP 568
                       VGT  Y+APEV S     +  D +  GIL+ E+L G  P
Sbjct: 181 FSEEPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWTLGILLYEMLYGTTP 231

Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-terminal photosensory domain and a C-terminal catalytic domain. The N-terminal domain contains two LOV (Light, Oxygen or Voltage) domains that binds FMN. Photoexcitation of the LOV domains results in autophosphorylation at multiple sites and activation of the catalytic domain. Neurospora crassa nrc-2 plays a role in growth and development by controlling entry into the conidiation program. Length = 316

>gnl|CDD|173691 cd05600, STKc_Sid2p_Dbf2p, Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

 Score = 50.5 bits (121), Expect = 1e-06
 Identities = 30/85 (35%), Positives = 41/85 (48%), Gaps = 4/85 (4%)

Query: 491 HRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQT 550
           HRD+K  N L+D   + +L DFGL++    G V     VVG+  Y+APEV          
Sbjct: 124 HRDLKPENFLIDASGHIKLTDFGLSK----GIVTYANSVVGSPDYMAPEVLRGKGYDFTV 179

Query: 551 DVFGFGILILEVLSGRRPIEEGKPN 575
           D +  G ++ E L G  P     PN
Sbjct: 180 DYWSLGCMLYEFLCGFPPFSGSTPN 204

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis. Dbf2p is important in regulating the mitotic exit network (MEN) and in cytokinesis. Length = 333

>gnl|CDD|173616 PTZ00426, PTZ00426, cAMP-dependent protein kinase catalytic subunit; Provisional

 Score = 49.6 bits (118), Expect = 3e-06
 Identities = 29/89 (32%), Positives = 47/89 (52%), Gaps = 4/89 (4%)

Query: 489 VLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRAST 548
           +++RD+K  N+LLDK+   ++ DFG A++        T  + GT  Y+APE+  +     
Sbjct: 152 IVYRDLKPENLLLDKDGFIKMTDFGFAKVVD----TRTYTLCGTPEYIAPEILLNVGHGK 207

Query: 549 QTDVFGFGILILEVLSGRRPIEEGKPNLV 577
             D +  GI I E+L G  P    +P L+
Sbjct: 208 AADWWTLGIFIYEILVGCPPFYANEPLLI 236

Length = 340

>gnl|CDD|143379 cd07874, STKc_JNK3, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3

 Score = 49.7 bits (118), Expect = 3e-06
 Identities = 56/199 (28%), Positives = 90/199 (45%), Gaps = 18/199 (9%)

Query: 372 IGVGGNGKV---YKGVLEGGGAEIAVKRISHENDGGTRAFLA--EISSLGRLKHKSLVGL 426
           IG G  G V   Y  VL+     +A+K++S      T A  A  E+  +  + HK+++ L
Sbjct: 25  IGSGAQGIVCAAYDAVLD---RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISL 81

Query: 427 RGWCKREKG--SLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEG 484
                 +K       VY  ME   +D  + Q    M L  E    +L  +  G+ +LH  
Sbjct: 82  LNVFTPQKSLEEFQDVYLVME--LMDANLCQVI-QMELDHERMSYLLYQMLCGIKHLHSA 138

Query: 485 WEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSG 544
               ++HRD+K SN+++  +   ++ DFGLAR  G   +   T  V T  Y APEV    
Sbjct: 139 ---GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFM--MTPYVVTRYYRAPEVILGM 193

Query: 545 RASTQTDVFGFGILILEVL 563
                 D++  G ++ E++
Sbjct: 194 GYKENVDIWSVGCIMGEMV 212

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, stroke, sciatic axotomy neural death, and neuronal death due to NGF deprivation, oxidative stress, or exposure to beta-amyloid peptide. This suggests that JNK3 may play roles in the pathogenesis of these diseases. Length = 355

>gnl|CDD|133234 cd05103, PTKc_VEGFR2, Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2

 Score = 49.6 bits (118), Expect = 3e-06
 Identities = 48/183 (26%), Positives = 86/183 (46%), Gaps = 18/183 (9%)

Query: 462 LSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLAR-MHGH 520
           L+ E+ I     VA G+ +L     +K +HRD+ + N+LL +    ++ DFGLAR ++  
Sbjct: 176 LTLEDLICYSFQVAKGMEFLAS---RKCIHRDLAARNILLSENNVVKICDFGLARDIYKD 232

Query: 521 GQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLS-GRRPIEEGKPNLVEM 579
                       + ++APE       + Q+DV+ FG+L+ E+ S G  P    K +  E 
Sbjct: 233 PDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID--EE 290

Query: 580 VWELMVQGKLLDALDARLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLEGK 639
               + +G  + A D        +   E+ + +   L C + +P  RPT  ++V+ L   
Sbjct: 291 FCRRLKEGTRMRAPD--------YTTPEMYQTM---LDCWHGEPSQRPTFSELVEHLGNL 339

Query: 640 IEA 642
           ++A
Sbjct: 340 LQA 342

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosphorylation and activation. VEGFR2 binds the ligands VEGFA, VEGFC, VEGFD and VEGFE. VEGFR2 signaling is implicated in all aspects of normal and pathological vascular endothelial cell biology. It induces a variety of cellular effects including migration, survival, and proliferation. It is critical in regulating embryonic vascular development and angiogenesis. VEGFR2 is the major signal transducer in pathological angiogenesis including cancer and diabetic retinopathy, and is a target for inhibition in cancer therapy. Length = 343

>gnl|CDD|143383 cd07878, STKc_p38beta_MAPK11, Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

 Score = 49.3 bits (117), Expect = 4e-06
 Identities = 55/203 (27%), Positives = 91/203 (44%), Gaps = 20/203 (9%)

Query: 372 IGVGGNGKVYKGVLEGGGAEIAVKRISHENDG--GTRAFLAEISSLGRLKHKSLVGL--- 426
           +G G  G V          ++AVK++S         R    E+  L  +KH++++GL   
Sbjct: 23  VGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMKHENVIGLLDV 82

Query: 427 --RGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEG 484
                       + LV + M  G+    I +C     LS E    ++  +  G+ Y+H  
Sbjct: 83  FTPATSIENFNEVYLVTNLM--GADLNNIVKCQK---LSDEHVQFLIYQLLRGLKYIHSA 137

Query: 485 WEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSG 544
               ++HRD+K SNV ++++   R+ DFGLAR          T  V T  Y APE+  + 
Sbjct: 138 ---GIIHRDLKPSNVAVNEDCELRILDFGLARQADD----EMTGYVATRWYRAPEIMLNW 190

Query: 545 RASTQT-DVFGFGILILEVLSGR 566
               QT D++  G ++ E+L G+
Sbjct: 191 MHYNQTVDIWSVGCIMAELLKGK 213

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is widely expressed in tissues and shows more similarity with p38alpha than with the other isoforms. Both are sensitive to pyridinylimidazoles and share some common substrates such as MAPK activated protein kinase 2 (MK2) and the transcription factors ATF2, c-Fos and, ELK-1. p38beta is involved in regulating the activation of the cyclooxygenase-2 promoter and the expression of TGFbeta-induced alpha-smooth muscle cell actin. Length = 343

>gnl|CDD|173735 cd07831, STKc_MOK, Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

 Score = 47.7 bits (114), Expect = 1e-05
 Identities = 59/267 (22%), Positives = 106/267 (39%), Gaps = 74/267 (27%)

Query: 409 LAEISSLGRLK-HKSLVGLRGWCK----REKGSLMLV--------YDYMEN-------GS 448
           L EI +L RL  H +++ L    +    R+ G L LV        Y+ ++          
Sbjct: 45  LREIQALRRLSPHPNILRL---IEVLFDRKTGRLALVFELMDMNLYELIKGRKRPLPEKR 101

Query: 449 LDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGR 508
           +  +++Q              +LK     + ++H      + HRDIK  N+L+  +   +
Sbjct: 102 VKSYMYQ--------------LLK----SLDHMHR---NGIFHRDIKPENILIKDD-ILK 139

Query: 509 LGDFGLARMHGHGQVAST---TRVVGTVGYLAPE-VFSSGRASTQTDVFGFGILILEVLS 564
           L DFG  R      + S    T  + T  Y APE + + G    + D++  G +  E+LS
Sbjct: 140 LADFGSCR-----GIYSKPPYTEYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILS 194

Query: 565 GRRPIEEGKPNLVEMVWELM-VQGKLLDALDARLRAKGGFDED-------EVERVLH--- 613
              P+  G  N ++ + ++  V G     +  + R     + +        + ++L    
Sbjct: 195 -LFPLFPGT-NELDQIAKIHDVLGTPDAEVLKKFRKSRHMNYNFPSKKGTGLRKLLPNAS 252

Query: 614 ------LGLLCAYPDPRARPTMRQVVK 634
                 L  L AY DP  R T +Q ++
Sbjct: 253 AEGLDLLKKLLAY-DPDERITAKQALR 278

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation. Length = 282

>gnl|CDD|173635 cd05054, PTKc_VEGFR, Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors

 Score = 47.2 bits (112), Expect = 2e-05
 Identities = 50/177 (28%), Positives = 86/177 (48%), Gaps = 18/177 (10%)

Query: 462 LSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLAR-MHGH 520
           L+ E+ I     VA G+ +L     +K +HRD+ + N+LL +    ++ DFGLAR ++  
Sbjct: 170 LTLEDLISYSFQVARGMEFLAS---RKCIHRDLAARNILLSENNVVKICDFGLARDIYKD 226

Query: 521 GQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLS-GRRPIEEGKPNLVEM 579
                       + ++APE       +TQ+DV+ FG+L+ E+ S G  P     P  V++
Sbjct: 227 PDYVRKGDARLPLKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPY----PG-VQI 281

Query: 580 VWELMVQGKLLDALDARLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVL 636
             E     +L +    R+RA     E     +  + L C + +P  RPT  ++V++L
Sbjct: 282 DEEFC--RRLKEG--TRMRAP----EYATPEIYSIMLDCWHNNPEDRPTFSELVEIL 330

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. There are five VEGF ligands in mammals, which bind, in an overlapping pattern to the three VEGFRs, which can form homo or heterodimers. VEGFRs regulate the cardiovascular system. They are critical for vascular development during embryogenesis and blood vessel formation in adults. They induce cellular functions common to other growth factor receptors such as cell migration, survival, and proliferation. VEGFR1 binds VEGFA, VEGFB, and placenta growth factor (PLGF). It regulates monocyte and macrophage migration, vascular permeability, haematopoiesis, and the recruitment of haematopietic progenitor cells from the bone marrow. Length = 337

>gnl|CDD|223009 PHA03211, PHA03211, serine/threonine kinase US3; Provisional

 Score = 47.2 bits (112), Expect = 2e-05
 Identities = 31/94 (32%), Positives = 49/94 (52%), Gaps = 6/94 (6%)

Query: 470 VLKDVAAGVLYLH-EGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLA-RMHGHGQVASTT 527
           V + + + + Y+H EG    ++HRDIK+ NVL++   +  LGDFG A    G        
Sbjct: 265 VARQLLSAIDYIHGEG----IIHRDIKTENVLVNGPEDICLGDFGAACFARGSWSTPFHY 320

Query: 528 RVVGTVGYLAPEVFSSGRASTQTDVFGFGILILE 561
            + GTV   APEV +    +   D++  G++I E
Sbjct: 321 GIAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIFE 354

Length = 461

>gnl|CDD|165478 PHA03212, PHA03212, serine/threonine kinase US3; Provisional

 Score = 46.1 bits (109), Expect = 4e-05
 Identities = 41/178 (23%), Positives = 77/178 (43%), Gaps = 29/178 (16%)

Query: 403 GGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMML 462
           GGT     E   L  + H S++ L+G     K + +++  Y      D + +      + 
Sbjct: 128 GGT---ATEAHILRAINHPSIIQLKGTFTYNKFTCLILPRY----KTDLYCYLAAKRNIA 180

Query: 463 SCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLA------- 515
            C+  + + + V   + YLHE    +++HRDIK+ N+ ++   +  LGDFG A       
Sbjct: 181 ICD-ILAIERSVLRAIQYLHE---NRIIHRDIKAENIFINHPGDVCLGDFGAACFPVDIN 236

Query: 516 --RMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEE 571
             + +G           GT+   APE+ +        D++  GI++ E+ +    + E
Sbjct: 237 ANKYYGWA---------GTIATNAPELLARDPYGPAVDIWSAGIVLFEMATCHDSLFE 285

Length = 391

>gnl|CDD|173333 PTZ00036, PTZ00036, glycogen synthase kinase; Provisional

 Score = 45.8 bits (108), Expect = 5e-05
 Identities = 59/249 (23%), Positives = 110/249 (44%), Gaps = 45/249 (18%)

Query: 361 AATKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLKH 420
           +  K +   N+IG G  G VY+ +      ++A+K++  +     R    E+  +  L H
Sbjct: 63  SPNKSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDPQYKNR----ELLIMKNLNH 118

Query: 421 KSLVGLRGWC------KREKGSLM---------LVYDYME-----NGSLDKWIFQCDGSM 460
            +++ L+ +       K EK   +          V+ YM+     N +L  ++ +     
Sbjct: 119 INIIFLKDYYYTECFKKNEKNIFLNVVMEFIPQTVHKYMKHYARNNHALPLFLVK----- 173

Query: 461 MLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNG-RLGDFGLARMHG 519
            L   +  R L        Y+H    K + HRD+K  N+L+D   +  +L DFG A+   
Sbjct: 174 -LYSYQLCRALA-------YIHS---KFICHRDLKPQNLLIDPNTHTLKLCDFGSAKNLL 222

Query: 520 HGQVASTTRVVGTVGYLAPEV-FSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVE 578
            GQ   +   + +  Y APE+   +   +T  D++  G +I E++ G  PI  G+ ++ +
Sbjct: 223 AGQ--RSVSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILG-YPIFSGQSSVDQ 279

Query: 579 MVWELMVQG 587
           +V  + V G
Sbjct: 280 LVRIIQVLG 288

Length = 440

>gnl|CDD|133217 cd05086, PTKc_Aatyk2, Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2

 Score = 45.2 bits (107), Expect = 5e-05
 Identities = 49/209 (23%), Positives = 94/209 (44%), Gaps = 26/209 (12%)

Query: 372 IGVGGNGKVYKGVL--EGGGAEIAVKRI-SHENDGGTRAFLAEISSLGRLKHKSLVGLRG 428
           IG G  GKV    +  + G A + VK + ++ +      FL +      L+H +++   G
Sbjct: 3   IGNGWFGKVLLSEIYTDTGVARVVVKELKANASSKEQNEFLQQGDPYRILQHPNILQCLG 62

Query: 429 WCKREKGSLMLVYDYMENGSL------DKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLH 482
            C  E    +LV++Y E G L      ++W  +    ++L      R+  ++AAGV ++H
Sbjct: 63  QCV-EAIPYLLVFEYCELGDLKSYLSQEQWHRRNSQLLLLQ-----RMACEIAAGVTHMH 116

Query: 483 EGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLA-RMHGHGQVASTTRVVGTVGYLAPEVF 541
           +      LH D+   N  L  ++  ++GD+G+    +    + +       + +LAPE+ 
Sbjct: 117 K---HNFLHSDLALRNCFLTSDLTVKVGDYGIGPSRYKEDYIETEDDKCVPLRWLAPELV 173

Query: 542 SS--GR--ASTQT---DVFGFGILILEVL 563
               G    + QT   +V+  G+ + E+ 
Sbjct: 174 GEFHGGLITAEQTKPSNVWALGVTLWELF 202

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage spermatogenesis. Although it is classified as a tyr kinase based on sequence similarity and the phylogenetic tree, Aatyk2 has been characterized as a serine/threonine kinase. Length = 268

>gnl|CDD|133238 cd05107, PTKc_PDGFR_beta, Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta

 Score = 45.0 bits (106), Expect = 1e-04
 Identities = 29/93 (31%), Positives = 52/93 (55%), Gaps = 6/93 (6%)

Query: 474 VAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLAR--MHGHGQVASTTRVVG 531
           VA G+ +L     K  +HRD+ + NVL+ +    ++ DFGLAR  M     ++  +  + 
Sbjct: 248 VANGMEFLAS---KNCVHRDLAARNVLICEGKLVKICDFGLARDIMRDSNYISKGSTFL- 303

Query: 532 TVGYLAPEVFSSGRASTQTDVFGFGILILEVLS 564
            + ++APE   +   +T +DV+ FGIL+ E+ +
Sbjct: 304 PLKWMAPESIFNNLYTTLSDVWSFGILLWEIFT 336

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-DD induce PDGFR beta homodimerization. PDGFR signaling plays many roles in normal embryonic development and adult physiology. PDGFR beta signaling leads to a variety of cellular effects including the stimulation of cell growth and chemotaxis, as well as the inhibition of apoptosis and GAP junctional communication. It is critical in normal angiogenesis as it is involved in the recruitment of pericytes and smooth muscle cells essential for vessel stability. Aberrant PDGFR beta expression is associated with some human cancers. The continuously-active fusion proteins of PDGFR beta with COL1A1 and TEL are associated with dermatofibrosarcoma protuberans (DFSP) and a subset of chronic myelomonocytic leukemia (CMML), respectively. Length = 401

>gnl|CDD|173700 cd05609, STKc_MAST, Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

 Score = 44.4 bits (105), Expect = 1e-04
 Identities = 47/158 (29%), Positives = 70/158 (44%), Gaps = 27/158 (17%)

Query: 429 WCKRE-KGSLMLVYDYMENG---SLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEG 484
           +C  E K  L +V +Y+E G   +L K I      M      R+   + V A + YLH  
Sbjct: 67  FCSFETKRHLCMVMEYVEGGDCATLLKNIGALPVDMA-----RMYFAETVLA-LEYLHN- 119

Query: 485 WEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMH--------GHGQVASTTR------VV 530
               ++HRD+K  N+L+    + +L DFGL+++           G +   TR      V 
Sbjct: 120 --YGIVHRDLKPDNLLITSMGHIKLTDFGLSKIGLMSLTTNLYEGHIEKDTREFLDKQVC 177

Query: 531 GTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRP 568
           GT  Y+APEV          D +  GI++ E L G  P
Sbjct: 178 GTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVP 215

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that are also expressed at neuromuscular junctions and postsynaptic densities. MAST1, MAST2, and MAST3 bind and phosphorylate the tumor suppressor PTEN, and may contribute to the regulation and stabilization of PTEN. MAST2 is involved in the regulation of the Fc-gamma receptor of the innate immune response in macrophages, and may also be involved in the regulation of the Na+/H+ exchanger NHE3. Length = 305

>gnl|CDD|173716 cd05627, STKc_NDR2, Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2

 Score = 43.9 bits (103), Expect = 2e-04
 Identities = 44/179 (24%), Positives = 73/179 (40%), Gaps = 44/179 (24%)

Query: 432 REKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLH 491
           ++K +L L+ +++  G +   + + D    LS E     + +    +  +H+      +H
Sbjct: 71  QDKRNLYLIMEFLPGGDMMTLLMKKD---TLSEEATQFYIAETVLAIDAIHQ---LGFIH 124

Query: 492 RDIKSSNVLLDKEMNGRLGDFGLA------------RMHGHG------------------ 521
           RDIK  N+LLD + + +L DFGL             R   H                   
Sbjct: 125 RDIKPDNLLLDAKGHVKLSDFGLCTGLKKAHRTEFYRNLTHNPPSDFSFQNMNSKRKAET 184

Query: 522 ------QVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKP 574
                 Q+A +T  VGT  Y+APEVF     +   D +  G+++ E+L G  P     P
Sbjct: 185 WKKNRRQLAYST--VGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFCSETP 241

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regulating neuronal growth and differentiation, as well as in facilitating neurite outgrowth. It is also implicated in fear conditioning as it contributes to the coupling of neuronal morphological changes with fear-memory consolidation. NDR2 is also referred to as STK38-like. Length = 360

>gnl|CDD|173746 cd07850, STKc_JNK, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase

 Score = 43.2 bits (102), Expect = 3e-04
 Identities = 58/205 (28%), Positives = 91/205 (44%), Gaps = 22/205 (10%)

Query: 371 VIGVGGNGKV---YKGVLEGGGAEIAVKRISHENDGGTRAFLA--EISSLGRLKHKSLVG 425
            IG G  G V   Y  V    G  +A+K++S      T A  A  E+  +  + HK+++G
Sbjct: 23  PIGSGAQGIVCAAYDTVT---GQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNHKNIIG 79

Query: 426 LRGWCKREKG--SLMLVYDYME--NGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYL 481
           L      +K       VY  ME  + +L + I      M L  E    +L  +  G+ +L
Sbjct: 80  LLNVFTPQKSLEEFQDVYLVMELMDANLCQVI-----QMDLDHERMSYLLYQMLCGIKHL 134

Query: 482 HEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVF 541
           H      ++HRD+K SN+++  +   ++ DFGLAR  G       T  V T  Y APEV 
Sbjct: 135 HSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS--FMMTPYVVTRYYRAPEVI 189

Query: 542 SSGRASTQTDVFGFGILILEVLSGR 566
                    D++  G ++ E++ G 
Sbjct: 190 LGMGYKENVDIWSVGCIMGEMIRGT 214

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3) that are alternatively spliced to produce at least 10 isoforms. JNKs are specifically activated by the MAPK kinases MKK4 and MKK7, which are in turn activated by upstream MAPK kinase kinases as a result of different stimuli including stresses such as ultraviolet (UV) irradiation, hyperosmolarity, heat shock, or cytokines. JNKs activate a large number of different substrates based on specific stimulus, cell type, and cellular condition, and may be implicated in seemingly contradictory functions. Length = 353

>gnl|CDD|173717 cd05628, STKc_NDR1, Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1

 Score = 43.1 bits (101), Expect = 4e-04
 Identities = 44/179 (24%), Positives = 74/179 (41%), Gaps = 44/179 (24%)

Query: 432 REKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLH 491
           ++K +L L+ +++  G +   + + D    L+ EE    + +    +  +H+      +H
Sbjct: 71  QDKLNLYLIMEFLPGGDMMTLLMKKD---TLTEEETQFYIAETVLAIDSIHQ---LGFIH 124

Query: 492 RDIKSSNVLLDKEMNGRLGDFGLA------------RMHGHG------------------ 521
           RDIK  N+LLD + + +L DFGL             R   H                   
Sbjct: 125 RDIKPDNLLLDSKGHVKLSDFGLCTGLKKAHRTEFYRNLNHSLPSDFTFQNMNSKRKAET 184

Query: 522 ------QVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKP 574
                 Q+A +T  VGT  Y+APEVF     +   D +  G+++ E+L G  P     P
Sbjct: 185 WKRNRRQLAFST--VGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFCSETP 241

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, muscle, lung and spleen. It is not an essential protein because mice deficient of NDR1 remain viable and fertile. However, these mice develop T-cell lymphomas and appear to be hypersenstive to carcinogenic treatment. NDR1 appears to act as a tumor suppressor. NDR1 is also called STK38. Length = 363

>gnl|CDD|223069 PHA03390, pk1, serine/threonine-protein kinase 1; Provisional

 Score = 42.5 bits (101), Expect = 4e-04
 Identities = 28/95 (29%), Positives = 45/95 (47%), Gaps = 9/95 (9%)

Query: 480 YLHEGWEKKVLHRDIKSSNVLLDKEMNG-RLGDFGLARMHGHGQVASTTRVVGTVGYLAP 538
            LH+     ++H DIK  NVL D+  +   L D+GL ++ G           GT+ Y +P
Sbjct: 124 DLHK---HNIIHNDIKLENVLYDRAKDRIYLCDYGLCKIIGTPSCYD-----GTLDYFSP 175

Query: 539 EVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGK 573
           E           D +  G+L  E+L+G+ P +E +
Sbjct: 176 EKIKGHNYDVSFDWWAVGVLTYELLTGKHPFKEDE 210

Length = 267

>gnl|CDD|173756 cd08216, PK_STRAD, Pseudokinase domain of STE20-related kinase adapter protein

 Score = 42.7 bits (101), Expect = 4e-04
 Identities = 53/218 (24%), Positives = 92/218 (42%), Gaps = 27/218 (12%)

Query: 371 VIGVG--GNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFL--AEISSLGRLKHKSLVGL 426
           +IG        V+    +     +AVK+I+ ++       L   EI +  +L+H +++  
Sbjct: 5   LIGKCFEDLMIVHLAKHKPTNTLVAVKKINLDSCSKEDLKLLQQEIITSRQLQHPNILPY 64

Query: 427 RGWCKREKGSLMLVYDYMENGS---LDKWIFQCDGSMMLSCEERIR-VLKDVAAGVLYLH 482
                     L +V   M  GS   L K  F  +G   L  E  I  +LKDV   + Y+H
Sbjct: 65  VT-SFIVDSELYVVSPLMAYGSCEDLLKTHF-PEG---LP-ELAIAFILKDVLNALDYIH 118

Query: 483 EGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLAR-MHGHGQ-----VASTTRVVGTVGYL 536
               K  +HR +K+S++LL  +    L     +  M  HG+            V  + +L
Sbjct: 119 ---SKGFIHRSVKASHILLSGDGKVVLSGLRYSVSMIKHGKRQRVVHDFPKSSVKNLPWL 175

Query: 537 APEVFS---SGRASTQTDVFGFGILILEVLSGRRPIEE 571
           +PEV      G  + ++D++  GI   E+ +G  P ++
Sbjct: 176 SPEVLQQNLQGY-NEKSDIYSVGITACELANGHVPFKD 212

Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buccal mucosa. There are two forms of STRAD, alpha and beta, that complex with LKB1 and MO25. The structure of STRAD-alpha is available and shows that this protein binds ATP, has an ordered activation loop, and adopts a closed conformation typical of fully active protein kinases. It does not possess activity due to nonconservative substitutions of essential catalytic residues. ATP binding enhances the affinity of STRAD for MO25. The conformation of STRAD-alpha stabilized through ATP and MO25 may be needed to activate LKB1. Length = 314

>gnl|CDD|173690 cd05599, STKc_NDR_like, Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

 Score = 41.6 bits (98), Expect = 0.001
 Identities = 32/116 (27%), Positives = 48/116 (41%), Gaps = 37/116 (31%)

Query: 490 LHRDIKSSNVLLDKEMNGRLGDFGL------------ARMHGH----------------- 520
           +HRDIK  N+LLD + + +L DFGL             R+  H                 
Sbjct: 123 IHRDIKPDNLLLDAKGHIKLSDFGLCTGLKKSHRTEFYRILSHALPSNFLDFISKPMSSK 182

Query: 521 GQVASTTR--------VVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRP 568
            +  +  R         VGT  Y+APEVF     + + D +  G+++ E+L G  P
Sbjct: 183 RKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDWWSLGVIMYEMLVGYPP 238

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplication. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. This subfamily also contains fungal NDR-like kinases. Length = 364

>gnl|CDD|173689 cd05598, STKc_LATS, Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

 Score = 40.6 bits (95), Expect = 0.002
 Identities = 30/127 (23%), Positives = 48/127 (37%), Gaps = 42/127 (33%)

Query: 490 LHRDIKSSNVLLDKEMNGRLGDFGL---------ARMHGHGQ------------------ 522
           +HRDIK  N+L+D++ + +L DFGL         ++ +  G                   
Sbjct: 123 IHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKYYQKGDHHRQDSMEPSEEWSEIDR 182

Query: 523 ----------VASTTRV-----VGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRR 567
                          R      VGT  Y+APEV      +   D +  G+++ E+L G+ 
Sbjct: 183 CRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGQP 242

Query: 568 PIEEGKP 574
           P     P
Sbjct: 243 PFLADTP 249

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Length = 376

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	705
KOG1187	361	consensus Serine/threonine protein kinase [Signal	100.0
cd06899	236	lectin_legume_LecRK_Arcelin_ConA legume lectins, l	100.0
PF00139	236	Lectin_legB: Legume lectin domain; InterPro: IPR00	100.0
KOG0581	364	consensus Mitogen-activated protein kinase kinase	100.0
KOG0192	362	consensus Tyrosine kinase specific for activated (	100.0
KOG0197	468	consensus Tyrosine kinases [Signal transduction me	100.0
KOG0591	375	consensus NIMA (never in mitosis)-related G2-speci	100.0
KOG0575	592	consensus Polo-like serine/threonine protein kinas	100.0
KOG0196	996	consensus Tyrosine kinase, EPH (ephrin) receptor f	100.0
KOG0595	429	consensus Serine/threonine-protein kinase involved	100.0
KOG0615	475	consensus Serine/threonine protein kinase Chk2 and	100.0
KOG1026	774	consensus Nerve growth factor receptor TRKA and re	100.0
KOG0600	560	consensus Cdc2-related protein kinase [Cell cycle	100.0
KOG0593	396	consensus Predicted protein kinase KKIAMRE [Genera	100.0
KOG0659	318	consensus Cdk activating kinase (CAK)/RNA polymera	100.0
KOG0661	538	consensus MAPK related serine/threonine protein ki	100.0
KOG0598	357	consensus Ribosomal protein S6 kinase and related	100.0
KOG0198	313	consensus MEKK and related serine/threonine protei	100.0
KOG4721	904	consensus Serine/threonine protein kinase, contain	100.0
cd05102	338	PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi	100.0
KOG1094	807	consensus Discoidin domain receptor DDR1 [Signal t	100.0
KOG0193	678	consensus Serine/threonine protein kinase RAF [Sig	100.0
KOG0578	550	consensus p21-activated serine/threonine protein k	100.0
KOG0663	419	consensus Protein kinase PITSLRE and related kinas	100.0
KOG1095	1025	consensus Protein tyrosine kinase [Signal transduc	100.0
PLN00113	968	leucine-rich repeat receptor-like protein kinase;	100.0
KOG0582	516	consensus Ste20-like serine/threonine protein kina	100.0
KOG0660	359	consensus Mitogen-activated protein kinase [Signal	100.0
KOG0583	370	consensus Serine/threonine protein kinase [Signal	100.0
KOG0658	364	consensus Glycogen synthase kinase-3 [Carbohydrate	100.0
KOG0592	604	consensus 3-phosphoinositide-dependent protein kin	100.0
KOG0597	808	consensus Serine-threonine protein kinase FUSED [G	100.0
cd05631	285	STKc_GRK4 Catalytic domain of the Protein Serine/T	100.0
KOG0194	474	consensus Protein tyrosine kinase [Signal transduc	100.0
KOG4278	1157	consensus Protein tyrosine kinase [Signal transduc	100.0
cd05571	323	STKc_PKB Catalytic domain of the Protein Serine/Th	100.0
PHA02988	283	hypothetical protein; Provisional	100.0
cd05064	266	PTKc_EphR_A10 Catalytic domain of the Protein Tyro	100.0
PTZ00263	329	protein kinase A catalytic subunit; Provisional	100.0
cd05096	304	PTKc_DDR1 Catalytic domain of the Protein Tyrosine	100.0
KOG3653	534	consensus Transforming growth factor beta/activin	100.0
KOG0201	467	consensus Serine/threonine protein kinase [Signal	100.0
cd07848	287	STKc_CDKL5 Catalytic domain of the Serine/Threonin	100.0
cd05612	291	STKc_PRKX_like Catalytic domain of PRKX-like Prote	100.0
KOG0616	355	consensus cAMP-dependent protein kinase catalytic	100.0
KOG0588	786	consensus Serine/threonine protein kinase [Cell cy	100.0
cd05585	312	STKc_YPK1_like Catalytic domain of Yeast Protein K	100.0
KOG0594	323	consensus Protein kinase PCTAIRE and related kinas	100.0
cd05593	328	STKc_PKB_gamma Catalytic domain of the Protein Ser	100.0
cd05052	263	PTKc_Abl Catalytic domain of the Protein Tyrosine	100.0
cd05595	323	STKc_PKB_beta Catalytic domain of the Protein Seri	100.0
cd05600	333	STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p-	100.0
cd01951	223	lectin_L-type legume lectins. The L-type (legume-t	100.0
cd05104	375	PTKc_Kit Catalytic domain of the Protein Tyrosine	100.0
PTZ00426	340	cAMP-dependent protein kinase catalytic subunit; P	100.0
cd06649	331	PKc_MEK2 Catalytic domain of the dual-specificity	100.0
PF07714	259	Pkinase_Tyr: Protein tyrosine kinase Protein kinas	100.0
cd05106	374	PTKc_CSF-1R Catalytic domain of the Protein Tyrosi	100.0
cd05048	283	PTKc_Ror Catalytic Domain of the Protein Tyrosine	100.0
KOG0667	586	consensus Dual-specificity tyrosine-phosphorylatio	100.0
cd05573	350	STKc_ROCK_NDR_like Catalytic domain of ROCK- and N	100.0
KOG0605	550	consensus NDR and related serine/threonine kinases	100.0
cd05594	325	STKc_PKB_alpha Catalytic domain of the Protein Ser	100.0
KOG0589	426	consensus Serine/threonine protein kinase [General	100.0
cd07871	288	STKc_PCTAIRE3 Catalytic domain of the Serine/Threo	100.0
cd05054	337	PTKc_VEGFR Catalytic domain of the Protein Tyrosin	100.0
cd07869	303	STKc_PFTAIRE1 Catalytic domain of the Serine/Threo	100.0
cd05601	330	STKc_CRIK Catalytic domain of the Protein Serine/T	100.0
cd05033	266	PTKc_EphR Catalytic domain of Ephrin Receptor Prot	100.0
cd05072	261	PTKc_Lyn Catalytic domain of the Protein Tyrosine	100.0
cd05584	323	STKc_p70S6K Catalytic domain of the Protein Serine	100.0
cd08228	267	STKc_Nek6 Catalytic domain of the Protein Serine/T	100.0
PLN00034	353	mitogen-activated protein kinase kinase; Provision	100.0
cd05614	332	STKc_MSK2_N N-terminal catalytic domain of the Pro	100.0
cd05108	316	PTKc_EGFR Catalytic domain of the Protein Tyrosine	100.0
cd05591	321	STKc_nPKC_epsilon Catalytic domain of the Protein	100.0
cd07859	338	STKc_TDY_MAPK_plant Catalytic domain of the Serine	100.0
KOG0611	668	consensus Predicted serine/threonine protein kinas	100.0
cd05068	261	PTKc_Frk_like Catalytic domain of Fyn-related kina	100.0
cd05605	285	STKc_GRK4_like Catalytic domain of G protein-coupl	100.0
cd07862	290	STKc_CDK6 Catalytic domain of the Serine/Threonine	100.0
cd05148	261	PTKc_Srm_Brk Catalytic domain of the Protein Tyros	100.0
PTZ00267	478	NIMA-related protein kinase; Provisional	100.0
cd05592	316	STKc_nPKC_theta_delta Catalytic domain of the Prot	100.0
cd05626	381	STKc_LATS2 Catalytic domain of the Protein Serine/	100.0
cd05618	329	STKc_aPKC_iota Catalytic domain of the Protein Ser	100.0
KOG0580	281	consensus Serine/threonine protein kinase [Cell cy	100.0
cd05589	324	STKc_PKN Catalytic domain of the Protein Serine/Th	100.0
cd05114	256	PTKc_Tec_Rlk Catalytic domain of the Protein Tyros	100.0
PHA03212	391	serine/threonine kinase US3; Provisional	100.0
cd05590	320	STKc_nPKC_eta Catalytic domain of the Protein Seri	100.0
cd05587	324	STKc_cPKC Catalytic domain of the Protein Serine/T	100.0
cd05596	370	STKc_ROCK Catalytic domain of the Protein Serine/T	100.0
cd05599	364	STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel	100.0
cd05582	318	STKc_RSK_N N-terminal catalytic domain of the Prot	100.0
cd05621	370	STKc_ROCK2 Catalytic domain of the Protein Serine/	100.0
cd08529	256	STKc_FA2-like Catalytic domain of the Protein Seri	100.0
cd05603	321	STKc_SGK2 Catalytic domain of the Protein Serine/T	100.0
cd05105	400	PTKc_PDGFR_alpha Catalytic domain of the Protein T	100.0
cd05616	323	STKc_cPKC_beta Catalytic domain of the Protein Ser	100.0
cd05575	323	STKc_SGK Catalytic domain of the Protein Serine/Th	100.0
cd05053	293	PTKc_FGFR Catalytic domain of the Protein Tyrosine	100.0
cd05049	280	PTKc_Trk Catalytic domain of the Protein Tyrosine	100.0
cd05628	363	STKc_NDR1 Catalytic domain of the Protein Serine/T	100.0
cd05588	329	STKc_aPKC Catalytic domain of the Protein Serine/T	100.0
cd05062	277	PTKc_IGF-1R Catalytic domain of the Protein Tyrosi	100.0
cd05111	279	PTK_HER3 Pseudokinase domain of the Protein Tyrosi	100.0
cd05598	376	STKc_LATS Catalytic domain of the Protein Serine/T	100.0
PTZ00283	496	serine/threonine protein kinase; Provisional	100.0
cd06650	333	PKc_MEK1 Catalytic domain of the dual-specificity	100.0
KOG2052	513	consensus Activin A type IB receptor, serine/threo	100.0
cd05619	316	STKc_nPKC_theta Catalytic domain of the Protein Se	100.0
cd05620	316	STKc_nPKC_delta Catalytic domain of the Protein Se	100.0
cd05094	291	PTKc_TrkC Catalytic domain of the Protein Tyrosine	100.0
cd05608	280	STKc_GRK1 Catalytic domain of the Protein Serine/T	100.0
cd05093	288	PTKc_TrkB Catalytic domain of the Protein Tyrosine	100.0
KOG2345	302	consensus Serine/threonine protein kinase/TGF-beta	100.0
cd05035	273	PTKc_Axl_like Catalytic Domain of Axl-like Protein	100.0
cd05075	272	PTKc_Axl Catalytic domain of the Protein Tyrosine	100.0
cd05570	318	STKc_PKC Catalytic domain of the Protein Serine/Th	100.0
cd05070	260	PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros	100.0
cd07853	372	STKc_NLK Catalytic domain of the Serine/Threonine	100.0
cd05084	252	PTKc_Fes Catalytic domain of the Protein Tyrosine	100.0
KOG0585	576	consensus Ca2+/calmodulin-dependent protein kinase	100.0
cd05604	325	STKc_SGK3 Catalytic domain of the Protein Serine/T	100.0
cd05622	371	STKc_ROCK1 Catalytic domain of the Protein Serine/	100.0
cd05625	382	STKc_LATS1 Catalytic domain of the Protein Serine/	100.0
KOG0694	694	consensus Serine/threonine protein kinase [Signal	100.0
cd05071	262	PTKc_Src Catalytic domain of the Protein Tyrosine	100.0
cd05081	284	PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of	100.0
cd05629	377	STKc_NDR_like_fungal Catalytic domain of Fungal Nu	100.0
cd08224	267	STKc_Nek6_Nek7 Catalytic domain of the Protein Ser	100.0
cd08229	267	STKc_Nek7 Catalytic domain of the Protein Serine/T	100.0
cd05090	283	PTKc_Ror1 Catalytic domain of the Protein Tyrosine	100.0
KOG4257	974	consensus Focal adhesion tyrosine kinase FAK, cont	100.0
KOG1989	738	consensus ARK protein kinase family [Signal transd	100.0
cd05113	256	PTKc_Btk_Bmx Catalytic domain of the Protein Tyros	100.0
cd06624	268	STKc_ASK Catalytic domain of the Protein Serine/Th	100.0
cd05043	280	PTK_Ryk Pseudokinase domain of Ryk (Receptor relat	100.0
cd05089	297	PTKc_Tie1 Catalytic domain of the Protein Tyrosine	100.0
cd05063	268	PTKc_EphR_A2 Catalytic domain of the Protein Tyros	100.0
cd05036	277	PTKc_ALK_LTK Catalytic domain of the Protein Tyros	100.0
cd05602	325	STKc_SGK1 Catalytic domain of the Protein Serine/T	100.0
cd06625	263	STKc_MEKK3_like Catalytic domain of MAP/ERK kinase	100.0
cd05630	285	STKc_GRK6 Catalytic domain of the Protein Serine/T	100.0
cd08219	255	STKc_Nek3 Catalytic domain of the Protein Serine/T	100.0
cd06637	272	STKc_TNIK Catalytic domain of the Protein Serine/T	100.0
cd05080	283	PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the	100.0
cd05059	256	PTKc_Tec_like Catalytic domain of Tec-like Protein	100.0
cd08223	257	STKc_Nek4 Catalytic domain of the Protein Serine/T	100.0
cd05032	277	PTKc_InsR_like Catalytic domain of Insulin Recepto	100.0
cd05045	290	PTKc_RET Catalytic domain of the Protein Tyrosine	100.0
cd05116	257	PTKc_Syk Catalytic domain of the Protein Tyrosine	100.0
cd05615	323	STKc_cPKC_alpha Catalytic domain of the Protein Se	100.0
cd05617	327	STKc_aPKC_zeta Catalytic domain of the Protein Ser	100.0
cd05597	331	STKc_DMPK_like Catalytic domain of Myotonic Dystro	100.0
cd05082	256	PTKc_Csk Catalytic domain of the Protein Tyrosine	100.0
cd06646	267	STKc_MAP4K5 Catalytic domain of the Protein Serine	100.0
cd05103	343	PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi	100.0
cd05067	260	PTKc_Lck_Blk Catalytic domain of the Protein Tyros	100.0
cd05607	277	STKc_GRK7 Catalytic domain of the Protein Serine/T	100.0
cd05051	296	PTKc_DDR Catalytic domain of the Protein Tyrosine	100.0
cd05091	283	PTKc_Ror2 Catalytic domain of the Protein Tyrosine	100.0
cd05115	257	PTKc_Zap-70 Catalytic domain of the Protein Tyrosi	100.0
cd05069	260	PTKc_Yes Catalytic domain of the Protein Tyrosine	100.0
cd05088	303	PTKc_Tie2 Catalytic domain of the Protein Tyrosine	100.0
cd05632	285	STKc_GRK5 Catalytic domain of the Protein Serine/T	100.0
cd05109	279	PTKc_HER2 Catalytic domain of the Protein Tyrosine	100.0
cd05092	280	PTKc_TrkA Catalytic domain of the Protein Tyrosine	100.0
cd05110	303	PTKc_HER4 Catalytic domain of the Protein Tyrosine	100.0
cd05065	269	PTKc_EphR_B Catalytic domain of the Protein Tyrosi	100.0
cd05624	331	STKc_MRCK_beta Catalytic domain of the Protein Ser	100.0
cd05107	401	PTKc_PDGFR_beta Catalytic domain of the Protein Ty	100.0
KOG0032	382	consensus Ca2+/calmodulin-dependent protein kinase	100.0
cd05079	284	PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the	100.0
cd05060	257	PTKc_Syk_like Catalytic domain of Spleen Tyrosine	100.0
cd05623	332	STKc_MRCK_alpha Catalytic domain of the Protein Se	100.0
cd06622	286	PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS	100.0
cd07872	309	STKc_PCTAIRE2 Catalytic domain of the Serine/Threo	100.0
cd05066	267	PTKc_EphR_A Catalytic domain of the Protein Tyrosi	100.0
cd05061	288	PTKc_InsR Catalytic domain of the Protein Tyrosine	100.0
cd05055	302	PTKc_PDGFR Catalytic domain of the Protein Tyrosin	100.0
cd07863	288	STKc_CDK4 Catalytic domain of the Serine/Threonine	100.0
cd05077	262	PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th	100.0
cd05047	270	PTKc_Tie Catalytic domain of Tie Protein Tyrosine	100.0
cd05058	262	PTKc_Met_Ron Catalytic domain of the Protein Tyros	100.0
cd06643	282	STKc_SLK Catalytic domain of the Protein Serine/Th	100.0
PTZ00284	467	protein kinase; Provisional	100.0
PF00069	260	Pkinase: Protein kinase domain Protein kinase; unc	100.0
cd05085	250	PTKc_Fer Catalytic domain of the Protein Tyrosine	100.0
cd05627	360	STKc_NDR2 Catalytic domain of the Protein Serine/T	100.0
cd00192	262	PTKc Catalytic domain of Protein Tyrosine Kinases.	100.0
cd05034	261	PTKc_Src_like Catalytic domain of Src kinase-like	100.0
cd06654	296	STKc_PAK1 Catalytic domain of the Protein Serine/T	100.0
PTZ00036	440	glycogen synthase kinase; Provisional	100.0
cd06638	286	STKc_myosinIIIA Catalytic domain of the Protein Se	100.0
cd05097	295	PTKc_DDR_like Catalytic domain of Discoidin Domain	100.0
cd05039	256	PTKc_Csk_like Catalytic domain of C-terminal Src k	100.0
cd06644	292	STKc_STK10_LOK Catalytic domain of the Protein Ser	100.0
cd05050	288	PTKc_Musk Catalytic domain of the Protein Tyrosine	100.0
cd05095	296	PTKc_DDR2 Catalytic domain of the Protein Tyrosine	100.0
cd06615	308	PKc_MEK Catalytic domain of the dual-specificity P	100.0
cd05101	304	PTKc_FGFR2 Catalytic domain of the Protein Tyrosin	100.0
cd07874	355	STKc_JNK3 Catalytic domain of the Serine/Threonine	100.0
cd06628	267	STKc_MAPKKK_Byr2_like Catalytic domain of fungal B	100.0
cd05056	270	PTKc_FAK Catalytic domain of the Protein Tyrosine	100.0
cd06619	279	PKc_MKK5 Catalytic domain of the dual-specificity	100.0
cd05076	274	PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th	100.0
cd07876	359	STKc_JNK2 Catalytic domain of the Serine/Threonine	100.0
cd06613	262	STKc_MAP4K3_like Catalytic domain of Mitogen-activ	100.0
PRK13184	932	pknD serine/threonine-protein kinase; Reviewed	100.0
cd06612	256	STKc_MST1_2 Catalytic domain of the Protein Serine	100.0
cd05100	334	PTKc_FGFR3 Catalytic domain of the Protein Tyrosin	100.0
cd07875	364	STKc_JNK1 Catalytic domain of the Serine/Threonine	100.0
cd08221	256	STKc_Nek9 Catalytic domain of the Protein Serine/T	100.0
cd05586	330	STKc_Sck1_like Catalytic domain of Suppressor of l	100.0
KOG0033	355	consensus Ca2+/calmodulin-dependent protein kinase	100.0
KOG4279	1226	consensus Serine/threonine protein kinase [Signal	100.0
cd05073	260	PTKc_Hck Catalytic domain of the Protein Tyrosine	100.0
cd05099	314	PTKc_FGFR4 Catalytic domain of the Protein Tyrosin	100.0
cd05038	284	PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P	100.0
cd05078	258	PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain	100.0
cd05098	307	PTKc_FGFR1 Catalytic domain of the Protein Tyrosin	100.0
KOG1025	1177	consensus Epidermal growth factor receptor EGFR an	100.0
cd07861	285	STKc_CDK1_euk Catalytic domain of the Serine/Threo	100.0
cd06611	280	STKc_SLK_like Catalytic domain of Ste20-like kinas	100.0
cd05040	257	PTKc_Ack_like Catalytic domain of the Protein Tyro	100.0
cd06655	296	STKc_PAK2 Catalytic domain of the Protein Serine/T	100.0
cd05087	269	PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein	100.0
cd07868	317	STKc_CDK8 Catalytic domain of the Serine/Threonine	100.0
cd06645	267	STKc_MAP4K3 Catalytic domain of the Protein Serine	100.0
cd05057	279	PTKc_EGFR_like Catalytic domain of Epidermal Growt	100.0
KOG0574	502	consensus STE20-like serine/threonine kinase MST [	100.0
cd06609	274	STKc_MST3_like Catalytic domain of Mammalian Ste20	100.0
cd08218	256	STKc_Nek1 Catalytic domain of the Protein Serine/T	100.0
cd06651	266	STKc_MEKK3 Catalytic domain of the Protein Serine/	100.0
cd06639	291	STKc_myosinIIIB Catalytic domain of the Protein Se	100.0
cd06632	258	STKc_MEKK1_plant Catalytic domain of the Protein S	100.0
KOG0577	948	consensus Serine/threonine protein kinase [Signal	100.0
cd05112	256	PTKc_Itk Catalytic domain of the Protein Tyrosine	100.0
cd07878	343	STKc_p38beta_MAPK11 Catalytic domain of the Serine	100.0
cd05046	275	PTK_CCK4 Pseudokinase domain of the Protein Tyrosi	100.0
cd06636	282	STKc_MAP4K4_6 Catalytic domain of the Protein Seri	100.0
cd08217	265	STKc_Nek2 Catalytic domain of the Protein Serine/T	100.0
PTZ00266	1021	NIMA-related protein kinase; Provisional	100.0
cd07847	286	STKc_CDKL1_4 Catalytic domain of the Serine/Threon	100.0
cd06620	284	PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr	100.0
cd05041	251	PTKc_Fes_like Catalytic domain of Fes-like Protein	100.0
cd05037	259	PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the	100.0
cd06610	267	STKc_OSR1_SPAK Catalytic domain of the Protein Ser	100.0
cd08220	256	STKc_Nek8 Catalytic domain of the Protein Serine/T	100.0
cd06656	297	STKc_PAK3 Catalytic domain of the Protein Serine/T	100.0
smart00219	258	TyrKc Tyrosine kinase, catalytic domain. Phosphotr	100.0
cd06642	277	STKc_STK25-YSK1 Catalytic domain of the Protein Se	100.0
cd05042	269	PTKc_Aatyk Catalytic domain of the Protein Tyrosin	100.0
cd05044	269	PTKc_c-ros Catalytic domain of the Protein Tyrosin	100.0
cd07833	288	STKc_CDKL Catalytic domain of Cyclin-Dependent pro	100.0
cd06626	264	STKc_MEKK4 Catalytic domain of the Protein Serine/	100.0
KOG0199	1039	consensus ACK and related non-receptor tyrosine ki	100.0
cd06630	268	STKc_MEKK1 Catalytic domain of the Protein Serine/	100.0
PHA03209	357	serine/threonine kinase US3; Provisional	100.0
cd07873	301	STKc_PCTAIRE1 Catalytic domain of the Serine/Threo	100.0
cd06640	277	STKc_MST4 Catalytic domain of the Protein Serine/T	100.0
cd08227	327	PK_STRAD_alpha Pseudokinase domain of STE20-relate	100.0
cd05580	290	STKc_PKA Catalytic domain of the Protein Serine/Th	100.0
cd05083	254	PTKc_Chk Catalytic domain of the Protein Tyrosine	100.0
KOG0662	292	consensus Cyclin-dependent kinase CDK5 [Intracellu	100.0
PHA03211	461	serine/threonine kinase US3; Provisional	100.0
cd07870	291	STKc_PFTAIRE2 Catalytic domain of the Serine/Threo	100.0
cd07832	286	STKc_CCRK Catalytic domain of the Serine/Threonine	100.0
cd07846	286	STKc_CDKL2_3 Catalytic domain of the Serine/Threon	100.0
cd06652	265	STKc_MEKK2 Catalytic domain of the Protein Serine/	100.0
cd05609	305	STKc_MAST Catalytic domain of the Protein Serine/T	100.0
cd06658	292	STKc_PAK5 Catalytic domain of the Protein Serine/T	100.0
cd07839	284	STKc_CDK5 Catalytic domain of the Serine/Threonine	100.0
cd06608	275	STKc_myosinIII_like Catalytic domain of Class III	100.0
cd07867	317	STKc_CDC2L6 Catalytic domain of Serine/Threonine K	100.0
cd05574	316	STKc_phototropin_like Catalytic domain of Phototro	100.0
cd07844	291	STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like	100.0
KOG0584	632	consensus Serine/threonine protein kinase [General	100.0
cd06621	287	PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek	100.0
cd08528	269	STKc_Nek10 Catalytic domain of the Protein Serine/	100.0
cd06617	283	PKc_MKK3_6 Catalytic domain of the dual-specificit	100.0
cd06629	272	STKc_MAPKKK_Bck1_like Catalytic domain of fungal B	100.0
cd05578	258	STKc_Yank1 Catalytic domain of the Protein Serine/	100.0
cd06623	264	PKc_MAPKK_plant_like Catalytic domain of Plant dua	100.0
cd06659	297	STKc_PAK6 Catalytic domain of the Protein Serine/T	100.0
cd05074	273	PTKc_Tyro3 Catalytic domain of the Protein Tyrosin	100.0
cd07860	284	STKc_CDK2_3 Catalytic domain of the Serine/Threoni	100.0
cd06605	265	PKc_MAPKK Catalytic domain of the dual-specificity	100.0
cd06631	265	STKc_YSK4 Catalytic domain of the Protein Serine/T	100.0
cd05086	268	PTKc_Aatyk2 Catalytic domain of the Protein Tyrosi	100.0
cd07841	298	STKc_CDK7 Catalytic domain of the Serine/Threonine	100.0
KOG0579	1187	consensus Ste20-like serine/threonine protein kina	100.0
KOG0599	411	consensus Phosphorylase kinase gamma subunit [Carb	100.0
cd06648	285	STKc_PAK_II Catalytic domain of the Protein Serine	100.0
cd06647	293	STKc_PAK_I Catalytic domain of the Protein Serine/	100.0
KOG0610	459	consensus Putative serine/threonine protein kinase	100.0
cd06641	277	STKc_MST3 Catalytic domain of the Protein Serine/T	100.0
cd05572	262	STKc_cGK_PKG Catalytic domain of the Protein Serin	100.0
cd08225	257	STKc_Nek5 Catalytic domain of the Protein Serine/T	100.0
cd06607	307	STKc_TAO Catalytic domain of the Protein Serine/Th	100.0
cd05122	253	PKc_STE Catalytic domain of STE family Protein Kin	100.0
PHA03207	392	serine/threonine kinase US3; Provisional	100.0
KOG4717	864	consensus Serine/threonine protein kinase [Signal	100.0
cd07849	336	STKc_ERK1_2_like Catalytic domain of Extracellular	100.0
KOG0666	438	consensus Cyclin C-dependent kinase CDK8 [Transcri	100.0
KOG0983	391	consensus Mitogen-activated protein kinase (MAPK)	100.0
cd06917	277	STKc_NAK1_like Catalytic domain of Fungal Nak1-lik	100.0
cd07840	287	STKc_CDK9_like Catalytic domain of Cyclin-Dependen	100.0
cd06606	260	STKc_MAPKKK Catalytic domain of the Protein Serine	100.0
cd06614	286	STKc_PAK Catalytic domain of the Protein Serine/Th	100.0
KOG0200	609	consensus Fibroblast/platelet-derived growth facto	100.0
cd07835	283	STKc_CDK1_like Catalytic domain of Cyclin-Dependen	100.0
cd05579	265	STKc_MAST_like Catalytic domain of Microtubule-ass	100.0
cd07843	293	STKc_CDC2L1 Catalytic domain of the Serine/Threoni	100.0
cd06616	288	PKc_MKK4 Catalytic domain of the dual-specificity	100.0
cd07836	284	STKc_Pho85 Catalytic domain of the Serine/Threonin	100.0
cd07842	316	STKc_CDK8_like Catalytic domain of Cyclin-Dependen	100.0
cd07864	302	STKc_CDK12 Catalytic domain of the Serine/Threonin	100.0
cd06635	317	STKc_TAO1 Catalytic domain of the Protein Serine/T	100.0
cd08215	258	STKc_Nek Catalytic domain of the Protein Serine/Th	100.0
cd07850	353	STKc_JNK Catalytic domain of the Serine/Threonine	100.0
cd06627	254	STKc_Cdc7_like Catalytic domain of Cell division c	100.0
cd07831	282	STKc_MOK Catalytic domain of the Serine/Threonine	100.0
PHA02882	294	putative serine/threonine kinase; Provisional	100.0
cd05577	277	STKc_GRK Catalytic domain of the Protein Serine/Th	100.0
cd07837	295	STKc_CdkB_plant Catalytic domain of the Serine/Thr	100.0
cd05633	279	STKc_GRK3 Catalytic domain of the Protein Serine/T	100.0
cd08530	256	STKc_CNK2-like Catalytic domain of the Protein Ser	100.0
cd06653	264	STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina	100.0
cd07845	309	STKc_CDK10 Catalytic domain of the Serine/Threonin	100.0
cd07865	310	STKc_CDK9 Catalytic domain of the Serine/Threonine	100.0
cd07858	337	STKc_TEY_MAPK_plant Catalytic domain of the Serine	100.0
cd07855	334	STKc_ERK5 Catalytic domain of the Serine/Threonine	100.0
KOG4645	1509	consensus MAPKKK (MAP kinase kinase kinase) SSK2 a	100.0
KOG0986	591	consensus G protein-coupled receptor kinase [Signa	100.0
cd06657	292	STKc_PAK4 Catalytic domain of the Protein Serine/T	100.0
cd05611	260	STKc_Rim15_like Catalytic domain of fungal Rim15-l	100.0
PLN00009	294	cyclin-dependent kinase A; Provisional	100.0
cd07830	283	STKc_MAK_like Catalytic domain of Male germ cell-A	100.0
cd05581	280	STKc_PDK1 Catalytic domain of the Protein Serine/T	100.0
cd06618	296	PKc_MKK7 Catalytic domain of the dual-specificity	100.0
cd05583	288	STKc_MSK_N N-terminal catalytic domain of the Prot	100.0
cd05118	283	STKc_CMGC Catalytic domain of CMGC family Serine/T	100.0
cd07852	337	STKc_MAPK15 Catalytic domain of the Serine/Threoni	100.0
PHA03390	267	pk1 serine/threonine-protein kinase 1; Provisional	100.0
cd07838	287	STKc_CDK4_6_like Catalytic domain of Cyclin-Depend	100.0
cd07879	342	STKc_p38delta_MAPK13 Catalytic domain of the Serin	100.0
cd05613	290	STKc_MSK1_N N-terminal catalytic domain of the Pro	100.0
cd07866	311	STKc_BUR1 Catalytic domain of the Serine/Threonine	100.0
cd07834	330	STKc_MAPK Catalytic domain of the Serine/Threonine	100.0
KOG1024	563	consensus Receptor-like protein tyrosine kinase RY	100.0
KOG0586	596	consensus Serine/threonine protein kinase [General	100.0
KOG1035	1351	consensus eIF-2alpha kinase GCN2 [Translation, rib	100.0
cd08226	328	PK_STRAD_beta Pseudokinase domain of STE20-related	100.0
cd07856	328	STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre	100.0
cd05606	278	STKc_beta_ARK Catalytic domain of the Protein Seri	100.0
cd07877	345	STKc_p38alpha_MAPK14 Catalytic domain of the Serin	100.0
cd06634	308	STKc_TAO2 Catalytic domain of the Protein Serine/T	100.0
KOG4250	732	consensus TANK binding protein kinase TBK1 [Signal	100.0
PHA03210	501	serine/threonine kinase US3; Provisional	100.0
KOG1006	361	consensus Mitogen-activated protein kinase (MAPK)	100.0
cd08216	314	PK_STRAD Pseudokinase domain of STE20-related kina	100.0
KOG0607	463	consensus MAP kinase-interacting kinase and relate	100.0
cd06633	313	STKc_TAO3 Catalytic domain of the Protein Serine/T	100.0
cd07854	342	STKc_MAPK4_6 Catalytic domain of the Serine/Threon	100.0
cd07880	343	STKc_p38gamma_MAPK12 Catalytic domain of the Serin	100.0
cd08222	260	STKc_Nek11 Catalytic domain of the Protein Serine/	100.0
KOG0671	415	consensus LAMMER dual specificity kinases [Signal	100.0
cd05123	250	STKc_AGC Catalytic domain of AGC family Protein Se	100.0
KOG0690	516	consensus Serine/threonine protein kinase [Signal	100.0
PTZ00024	335	cyclin-dependent protein kinase; Provisional	100.0
cd07829	282	STKc_CDK_like Catalytic domain of Cyclin-Dependent	100.0
KOG4236	888	consensus Serine/threonine protein kinase PKC mu/P	100.0
KOG0596	677	consensus Dual specificity; serine/threonine and t	100.0
cd07851	343	STKc_p38 Catalytic domain of the Serine/Threonine	100.0
cd07857	332	STKc_MPK1 Catalytic domain of the Serine/Threonine	100.0
KOG0612	1317	consensus Rho-associated, coiled-coil containing p	99.98
KOG0668	338	consensus Casein kinase II, alpha subunit [Signal	99.98
cd05610	669	STKc_MASTL Catalytic domain of the Protein Serine/	99.98
KOG0587	953	consensus Traf2- and Nck-interacting kinase and re	99.97
KOG1151	775	consensus Tousled-like protein kinase [Signal tran	99.97
KOG0669	376	consensus Cyclin T-dependent kinase CDK9 [Cell cyc	99.97
PLN03225	566	Serine/threonine-protein kinase SNT7; Provisional	99.97
KOG0664	449	consensus Nemo-like MAPK-related serine/threonine	99.97
cd05576	237	STKc_RPK118_like Catalytic domain of the Protein S	99.97
KOG0696	683	consensus Serine/threonine protein kinase [Signal	99.97
KOG0604	400	consensus MAP kinase-activated protein kinase 2 [S	99.97
smart00220	244	S_TKc Serine/Threonine protein kinases, catalytic	99.97
KOG0603	612	consensus Ribosomal protein S6 kinase [Signal tran	99.97
PLN03224	507	probable serine/threonine protein kinase; Provisio	99.97
KOG0984	282	consensus Mitogen-activated protein kinase (MAPK)	99.97
KOG1290	590	consensus Serine/threonine protein kinase [Signal	99.96
KOG0608	1034	consensus Warts/lats-like serine threonine kinases	99.96
KOG0665	369	consensus Jun-N-terminal kinase (JNK) [Signal tran	99.96
KOG1027	903	consensus Serine/threonine protein kinase and endo	99.96
KOG0670	752	consensus U4/U6-associated splicing factor PRP4 [R	99.96
KOG0695	593	consensus Serine/threonine protein kinase [Signal	99.96
KOG0614	732	consensus cGMP-dependent protein kinase [Signal tr	99.96
KOG1167	418	consensus Serine/threonine protein kinase of the C	99.96
cd00180	215	PKc Catalytic domain of Protein Kinases. Protein K	99.95
smart00221	225	STYKc Protein kinase; unclassified specificity. Ph	99.95
KOG1152	772	consensus Signal transduction serine/threonine kin	99.95
KOG0576	829	consensus Mitogen-activated protein kinase kinase	99.95
KOG1345	378	consensus Serine/threonine kinase [Signal transduc	99.93
PLN00181	793	protein SPA1-RELATED; Provisional	99.92
smart00750	176	KIND kinase non-catalytic C-lobe domain. It is an	99.91
PRK09188	365	serine/threonine protein kinase; Provisional	99.9
KOG0195	448	consensus Integrin-linked kinase [Signal transduct	99.88
KOG1164	322	consensus Casein kinase (serine/threonine/tyrosine	99.87
cd07308	218	lectin_leg-like legume-like lectins: ERGIC-53, ERG	99.87
KOG1163	341	consensus Casein kinase (serine/threonine/tyrosine	99.87
KOG1165	449	consensus Casein kinase (serine/threonine/tyrosine	99.87
COG0515	384	SPS1 Serine/threonine protein kinase [General func	99.85
KOG0590	601	consensus Checkpoint kinase and related serine/thr	99.83
cd05147	190	RIO1_euk RIO kinase family; eukaryotic RIO1, catal	99.81
PRK10359	232	lipopolysaccharide core biosynthesis protein; Prov	99.81
cd05145	190	RIO1_like RIO kinase family; RIO1, RIO3 and simila	99.79
KOG1023	484	consensus Natriuretic peptide receptor, guanylate	99.78
KOG0603	612	consensus Ribosomal protein S6 kinase [Signal tran	99.78
cd06901	248	lectin_VIP36_VIPL VIP36 and VIPL type 1 transmembr	99.77
PRK10345	210	hypothetical protein; Provisional	99.76
PF14531	288	Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_	99.76
KOG1240	1431	consensus Protein kinase containing WD40 repeats [	99.74
PRK12274	218	serine/threonine protein kinase; Provisional	99.74
cd06902	225	lectin_ERGIC-53_ERGL ERGIC-53 and ERGL type 1 tran	99.71
smart00090	237	RIO RIO-like kinase.	99.7
KOG4158	598	consensus BRPK/PTEN-induced protein kinase [Signal	99.7
KOG1033	516	consensus eIF-2alpha kinase PEK/EIF2AK3 [Translati	99.69
KOG1166	974	consensus Mitotic checkpoint serine/threonine prot	99.68
PRK14879	211	serine/threonine protein kinase; Provisional	99.68
PRK09605	535	bifunctional UGMP family protein/serine/threonine	99.66
cd05144	198	RIO2_C RIO kinase family; RIO2, C-terminal catalyt	99.66
KOG0606	1205	consensus Microtubule-associated serine/threonine	99.66
TIGR03724	199	arch_bud32 Kae1-associated kinase Bud32. Members o	99.65
cd05120	155	APH_ChoK_like Aminoglycoside 3'-phosphotransferase	99.56
cd05119	187	RIO RIO kinase family, catalytic domain. The RIO k	99.54
PRK01723	239	3-deoxy-D-manno-octulosonic-acid kinase; Reviewed	99.53
PF03388	229	Lectin_leg-like: Legume-like lectin family; InterP	99.51
cd06903	215	lectin_EMP46_EMP47 EMP46 and EMP47 type 1 transmem	99.49
KOG0590	601	consensus Checkpoint kinase and related serine/thr	99.47
TIGR01982	437	UbiB 2-polyprenylphenol 6-hydroxylase. This model	99.37
KOG1266	458	consensus Protein kinase [Signal transduction mech	99.33
KOG0601	524	consensus Cyclin-dependent kinase WEE1 [Cell cycle	99.27
PRK04750	537	ubiB putative ubiquinone biosynthesis protein UbiB	99.25
KOG1243	690	consensus Protein kinase [General function predict	99.2
cd05151	170	ChoK Choline Kinase (ChoK). The ChoK subfamily is	99.2
KOG3839	351	consensus Lectin VIP36, involved in the transport	99.16
cd05146	197	RIO3_euk RIO kinase family; eukaryotic RIO3, catal	99.1
KOG0601	524	consensus Cyclin-dependent kinase WEE1 [Cell cycle	99.08
cd05154	223	ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 an	98.98
KOG3838	497	consensus Mannose lectin ERGIC-53, involved in gly	98.96
KOG3087	229	consensus Serine/threonine protein kinase [General	98.9
COG3642	204	Mn2+-dependent serine/threonine protein kinase [Si	98.88
KOG0606	1205	consensus Microtubule-associated serine/threonine	98.85
KOG3741	655	consensus Poly(A) ribonuclease subunit [RNA proces	98.8
PRK15123	268	lipopolysaccharide core heptose(I) kinase RfaP; Pr	98.73
PF01163	188	RIO1: RIO1 family; InterPro: IPR018934 Protein pho	98.63
COG4248	637	Uncharacterized protein with protein kinase and he	98.51
KOG2137	700	consensus Protein kinase [Signal transduction mech	98.47
cd06900	255	lectin_VcfQ VcfQ bacterial pilus biogenesis protei	98.45
COG0478	304	RIO-like serine/threonine protein kinase fused to	98.43
PRK09902	216	hypothetical protein; Provisional	98.39
PF06293	206	Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family;	98.38
TIGR02172	226	Fb_sc_TIGR02172 Fibrobacter succinogenes paralogou	98.1
COG0661	517	AarF Predicted unusual protein kinase [General fun	98.05
PF01636	239	APH: Phosphotransferase enzyme family This family	97.92
KOG0576	829	consensus Mitogen-activated protein kinase kinase	97.9
PF06176	229	WaaY: Lipopolysaccharide core biosynthesis protein	97.89
COG1718	268	RIO1 Serine/threonine protein kinase involved in c	97.87
PF12260	188	PIP49_C: Protein-kinase domain of FAM69; InterPro:	97.8
KOG1235	538	consensus Predicted unusual protein kinase [Genera	97.77
PLN02876	822	acyl-CoA dehydrogenase	97.71
cd05150	244	APH Aminoglycoside 3'-phosphotransferase (APH). Th	97.63
PRK10593	297	hypothetical protein; Provisional	97.32
PF10707	199	YrbL-PhoP_reg: PhoP regulatory network protein Yrb	97.31
cd05155	235	APH_ChoK_like_1 Uncharacterized bacterial proteins	97.28
PF13095	207	FTA2: Kinetochore Sim4 complex subunit FTA2	97.27
COG2112	201	Predicted Ser/Thr protein kinase [Signal transduct	97.24
TIGR02721	256	ycfN_thiK thiamine kinase. Members of this family	97.18
cd05157	235	ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes.	97.16
PRK09550	401	mtnK methylthioribose kinase; Reviewed	96.91
cd05156	302	ChoK_euk Choline Kinase (ChoK) in eukaryotes. The	96.72
KOG1035	1351	consensus eIF-2alpha kinase GCN2 [Translation, rib	96.69
PRK05231	319	homoserine kinase; Provisional	96.65
cd05153	296	HomoserineK_II Homoserine Kinase, type II. Homoser	96.57
TIGR00938	307	thrB_alt homoserine kinase, Neisseria type. Homose	96.32
PLN02236	344	choline kinase	96.07
cd05152	276	MPH2' Macrolide 2'-Phosphotransferase (MPH2'). MPH	95.95
KOG1826	2724	consensus Ras GTPase activating protein RasGAP/neu	95.79
KOG1093	725	consensus Predicted protein kinase (contains TBC a	95.58
KOG2268	465	consensus Serine/threonine protein kinase [Signal	95.56
COG3173	321	Predicted aminoglycoside phosphotransferase [Gener	95.55
TIGR01767	370	MTRK 5-methylthioribose kinase. This enzyme is inv	95.3
PF03881	288	Fructosamin_kin: Fructosamine kinase; InterPro: IP	94.95
PLN02421	330	phosphotransferase, alcohol group as acceptor/kina	94.61
COG5072	488	ALK1 Serine/threonine kinase of the haspin family	94.47
KOG2270	520	consensus Serine/threonine protein kinase involved	94.45
PF01633	211	Choline_kinase: Choline/ethanolamine kinase; Inter	94.44

>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=2.6e-54  Score=464.58  Aligned_cols=288  Identities=44%  Similarity=0.782  Sum_probs=252.3

Q ss_pred             CCcccCHHHHHHHhCCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCCchhHHHHHHHHHHhccCCCCCcceeeee
Q 005257          350 WPHRITYQEIEAATKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGW  429 (705)
Q Consensus       350 ~~~~~~~~el~~at~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~~~~~~~~~Ei~~l~~l~Hpniv~l~g~  429 (705)
                      ..+.|+|+|+..||++|+..+.||+|+||.||+|.+.++ ..||||++.....+..++|.+|+.++.+++|||+|+|+||
T Consensus        61 ~~~~fs~~el~~AT~~Fs~~~~ig~Ggfg~VYkG~l~~~-~~vAVK~~~~~~~~~~~eF~~Ei~~ls~l~H~Nlv~LlGy  139 (361)
T KOG1187|consen   61 PLRSFSYDELRKATNNFSESNLIGEGGFGTVYKGVLSDG-TVVAVKRLSSNSGQGEREFLNEVEILSRLRHPNLVKLLGY  139 (361)
T ss_pred             CcceeeHHHHHHHHhCCchhcceecCCCeEEEEEEECCC-CEEEEEEecCCCCcchhHHHHHHHHHhcCCCcCcccEEEE
Confidence            356799999999999999999999999999999999864 8899998876544315669999999999999999999999


Q ss_pred             eeeccCceEEEEeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeee
Q 005257          430 CKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRL  509 (705)
Q Consensus       430 ~~~~~~~~~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL  509 (705)
                      |.+.+...+||||||++|+|.++|+..... .++|.+|++|+.++|+||+|||+.+.++||||||||+|||||+++++||
T Consensus       140 C~e~~~~~~LVYEym~nGsL~d~L~~~~~~-~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~~~~aKl  218 (361)
T KOG1187|consen  140 CLEGGEHRLLVYEYMPNGSLEDHLHGKKGE-PLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDEDFNAKL  218 (361)
T ss_pred             EecCCceEEEEEEccCCCCHHHHhCCCCCC-CCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECCCCCEEc
Confidence            997433589999999999999999876554 7999999999999999999999999889999999999999999999999


Q ss_pred             eeeccceecCC-CCcceeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhhCCCCCCCC----CccHHHHHHHHH
Q 005257          510 GDFGLARMHGH-GQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEG----KPNLVEMVWELM  584 (705)
Q Consensus       510 ~DFGla~~~~~-~~~~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~----~~~~~~~v~~~~  584 (705)
                      +|||+|+.... ........ .||.+|+|||++..+..+.|+|||||||+|+||+||++|.+..    ...+++|++..+
T Consensus       219 sDFGLa~~~~~~~~~~~~~~-~gt~gY~~PEy~~~g~lt~KsDVySFGVvllElitgr~~~d~~~~~~~~~l~~w~~~~~  297 (361)
T KOG1187|consen  219 SDFGLAKLGPEGDTSVSTTV-MGTFGYLAPEYASTGKLTEKSDVYSFGVVLLELITGRKAVDQSRPRGELSLVEWAKPLL  297 (361)
T ss_pred             cCccCcccCCccccceeeec-CCCCccCChhhhccCCcCcccccccchHHHHHHHhCCcccCCCCCcccccHHHHHHHHH
Confidence            99999976554 22211111 7999999999999999999999999999999999999988743    335899999999


Q ss_pred             HhCchhHHHHHhhhcCCCCCH-HHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHhccc
Q 005257          585 VQGKLLDALDARLRAKGGFDE-DEVERVLHLGLLCAYPDPRARPTMRQVVKVLEGKIE  641 (705)
Q Consensus       585 ~~~~~~~~id~~l~~~~~~~~-~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~  641 (705)
                      .++++.+.+|+++.. ..++. +++.++..++..|++.+|.+||+|.||++.|+....
T Consensus       298 ~~~~~~eiiD~~l~~-~~~~~~~~~~~~~~~a~~C~~~~~~~RP~m~~Vv~~L~~~~~  354 (361)
T KOG1187|consen  298 EEGKLREIVDPRLKE-GEYPDEKEVKKLAELALRCLRPDPKERPTMSQVVKELEGILS  354 (361)
T ss_pred             HCcchhheeCCCccC-CCCChHHHHHHHHHHHHHHcCcCCCcCcCHHHHHHHHHhhcc
Confidence            999999999999864 34443 788999999999999999999999999999964433

>cd06899 lectin_legume_LecRK_Arcelin_ConA legume lectins, lectin-like receptor kinases, arcelin, concanavalinA, and alpha-amylase inhibitor

Probab=100.00  E-value=2.9e-53  Score=430.65  Aligned_cols=228  Identities=50%  Similarity=0.846  Sum_probs=206.7

Q ss_pred             eeEEeCCCCC--CCeEEEcceEee-cCcEEecCCC--CCeEEEEEcCCCccccCCCCCcccceEEEEEEEEecCCCCCCC
Q 005257           26 VDFVFNGFNS--SNLSLYGTATVE-SRILTLTNST--TFTIGRALYPSKIPTKRPNSSYVYPFSTSFIFAMAPYKGVLAG  100 (705)
Q Consensus        26 ~~f~f~~f~~--~~~~~~g~a~~~-~~~l~lt~~~--~~~~Gr~~y~~pv~l~~~~~~~~~sF~t~F~f~i~~~~~~~~g  100 (705)
                      ++|+|++|..  .+|+|+|+|.+. ++.|+||++.  ..++|||+|++||+||++.+++++||+|+|+|.|.+.+...+|
T Consensus         1 ~~f~f~~f~~~~~~l~l~G~A~~~~~~~i~LT~~~~~~~~~G~v~y~~pi~l~~~~~~~~~sFst~F~F~i~~~~~~~~g   80 (236)
T cd06899           1 LSFNFNGFSSDQSNLTLQGDATISSNGALQLTNDTSPASSVGRALYSKPVRLWDSTTGKVASFSTSFSFSITPPNPSLGG   80 (236)
T ss_pred             CceecCCCCCCCCCEEEecceEcCCCCeEEecCCCCCCcceEEEEeCCCEEeecCCCCCceeEEEEEEEEEEcCCCCCCC
Confidence            4799999976  799999999998 8999999998  8999999999999999999999999999999999987767789


Q ss_pred             CceEEEEeeCCCCCCCCCCCcccccccCCCCCCCCcEEEEEeecccCCCCCCCCCCeeEEecCCCcccccccccccCCCC
Q 005257          101 HGLVFLFVPFHGIKGATEAQHLGLFNRTNDGNSSNHVFGVEFDVFKNQEFNDIDENHVGIDVNSLTSVSAHAAGYWPDNQ  180 (705)
Q Consensus       101 ~G~aF~~~~~~~~~~~~~g~~lGl~~~~~~~~~~~~~vaVEFDt~~n~~~~d~~~~Hvgidvns~~S~~~~~~~~~~~~~  180 (705)
                      |||||||+|+...+.+..|++|||++.++.+++.+++|||||||++|.+++||++||||||+|++.|..+.   +|+.  
T Consensus        81 dGlAF~i~~~~~~~~~~~G~~lG~~~~~~~~~~~~~~vAVEFDT~~n~~~~D~~~nHigIdvn~~~S~~~~---~~~~--  155 (236)
T cd06899          81 DGLAFFLAPTDSLPPASSGGYLGLFNSSNNGNSSNHIVAVEFDTFQNPEFGDPDDNHVGIDVNSLVSVKAG---YWDD--  155 (236)
T ss_pred             CeEEEEEecCCCCCCCCCcceeeeecCCCCCCcccceEEEEeecccCcccCCCCCCeEEEEcCCcccceee---cccc--
Confidence            99999999987666678999999999887777889999999999999999999999999999999887653   3422  


Q ss_pred             CCCCCCCCCCCCCCCccccceeecCCCcceEEEEEe--cCceEEEEEEEccCCCCCCCceeeeecCccccccceeccccc
Q 005257          181 TDSSGSNSNSGTGDDEKSFKELKLNNGKNYQVWIDY--ADSFINITMVEAGMKRPKRPLLSVPLNLSGVLEDEMYVGFTA  258 (705)
Q Consensus       181 ~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~I~Y--~~~~~~v~~~~~~~~~~~~~~ls~~vdl~~~l~~~~~vGfsa  258 (705)
                                         ..+.|.+|+.++|||+|  ..++|+|++...+..+|..|+++..+||+.+||++|||||||
T Consensus       156 -------------------~~~~l~~g~~~~v~I~Y~~~~~~L~V~l~~~~~~~~~~~~ls~~vdL~~~l~~~~~vGFSa  216 (236)
T cd06899         156 -------------------DGGKLKSGKPMQAWIDYDSSSKRLSVTLAYSGVAKPKKPLLSYPVDLSKVLPEEVYVGFSA  216 (236)
T ss_pred             -------------------ccccccCCCeEEEEEEEcCCCCEEEEEEEeCCCCCCcCCEEEEeccHHHhCCCceEEEEEe
Confidence                               23347899999999999  478999999988777899999999999999999999999999


Q ss_pred             ccccccccceeeeeeeccc
Q 005257          259 ATGQLVESHKILAWSFSNT  277 (705)
Q Consensus       259 stg~~~~~h~i~~wsf~~~  277 (705)
                      |||...|.|+|++|+|+++
T Consensus       217 sTG~~~~~h~i~sWsF~s~  235 (236)
T cd06899         217 STGLLTELHYILSWSFSSN  235 (236)
T ss_pred             EcCCCcceEEEEEEEEEcC
Confidence            9999999999999999975

This alignment model includes the legume lectins (also known as agglutinins), the arcelin (also known as phytohemagglutinin-L) family of lectin-like defense proteins, the LecRK family of lectin-like receptor kinases, concanavalinA (ConA), and an alpha-amylase inhibitor. Arcelin is a major seed glycoprotein discovered in kidney beans (Phaseolus vulgaris) that has insecticidal properties and protects the seeds from predation by larvae of various bruchids. Arcelin is devoid of monosaccharide binding properties and lacks a key metal-binding loop that is present in other members of this family. Phytohaemagglutinin (PHA) is a lectin found in plants, especially beans, that affects cell metabolism by inducing mitosis and by altering the permeability of the cell membrane to various proteins. PHA agglutinates most mammalian red blood cell types by bindin

>PF00139 Lectin_legB: Legume lectin domain; InterPro: IPR001220 Legume lectins are one of the largest lectin families with more than 70 lectins reported

Probab=100.00  E-value=1.6e-51  Score=419.13  Aligned_cols=229  Identities=42%  Similarity=0.712  Sum_probs=202.7

Q ss_pred             eeeEEeCCC-CCCCeEEEcceEe-ecCcEEecCCCC-CeEEEEEcCCCccccCCCCCcccceEEEEEEEEecC--CCCCC
Q 005257           25 AVDFVFNGF-NSSNLSLYGTATV-ESRILTLTNSTT-FTIGRALYPSKIPTKRPNSSYVYPFSTSFIFAMAPY--KGVLA   99 (705)
Q Consensus        25 ~~~f~f~~f-~~~~~~~~g~a~~-~~~~l~lt~~~~-~~~Gr~~y~~pv~l~~~~~~~~~sF~t~F~f~i~~~--~~~~~   99 (705)
                      +++|+|++| +..++++.|+|.+ .++.|+||++.. +++|||+|++||+|||+.+++++||+|+|+|.|...  ....+
T Consensus         1 ~~~F~~~~F~~~~~~~l~G~A~~~~~~~l~LT~~~~~~~~G~~~y~~pi~l~d~~~~~~~sF~t~F~f~i~~~~~~~~~~   80 (236)
T PF00139_consen    1 SVSFSFPSFSNSSNLTLNGDASISSNGSLQLTPDSTNNQAGRAWYNNPIQLWDSTTGNVASFSTSFSFSITNGPGSSNNG   80 (236)
T ss_dssp             EEEEEESSBTTGTTEEEEETEEEETTSEEESSTBETSSEEEEEEESSEEESBETTTTEBEEEEEEEEEEEEESSSSSSS-
T ss_pred             CceEEcCCCCCCCceEEEeeEEeccCCeEEcCCCCCCCcEEEEEECCcEEEeCCCCcceeeeeeEEEEEEeccCCCCccC
Confidence            479999999 5689999999999 589999999988 999999999999999999999999999999999643  55678


Q ss_pred             CCceEEEEeeCCCCCCCCCCCcccccccCCCCCCCCcEEEEEeecccCCCCCCCCCCeeEEecCCCcccccccccccCCC
Q 005257          100 GHGLVFLFVPFHGIKGATEAQHLGLFNRTNDGNSSNHVFGVEFDVFKNQEFNDIDENHVGIDVNSLTSVSAHAAGYWPDN  179 (705)
Q Consensus       100 g~G~aF~~~~~~~~~~~~~g~~lGl~~~~~~~~~~~~~vaVEFDt~~n~~~~d~~~~Hvgidvns~~S~~~~~~~~~~~~  179 (705)
                      ||||||||+|....+.++.|++||+++.++.+...++.|||||||++|++++||++||||||+|++.|..+++++++   
T Consensus        81 ~dGlAFvi~~~~~~~~~~~g~~lG~~~~~~~~~~~~~~vAVEFDT~~N~~~~d~~~nHIgI~~n~~~s~~~~~~~~~---  157 (236)
T PF00139_consen   81 GDGLAFVIQPDPNLPGGSSGGYLGLFNSSTDGNGINNSVAVEFDTYKNPEYNDPDDNHIGIDVNSVVSNKTASAGYY---  157 (236)
T ss_dssp             BEEEEEEEEETTSSTTTSSGGGTTTSSSSSTTGGGGCEEEEEEETSTCGGGTTTSSSEEEEEESSSSESEEEE-------
T ss_pred             CCceEEEEecCcccccCCCCCccCccccccCCCccCcEEEEEEeeeecccccccCCCEEEEECCCCccccccccccc---
Confidence            99999999999877777899999999988777778999999999999999999999999999999999888776654   


Q ss_pred             CCCCCCCCCCCCCCCCccccceeecCCCcceEEEEEe--cCceEEEEEEEccCCCCCCCceeeeecCccccccceecccc
Q 005257          180 QTDSSGSNSNSGTGDDEKSFKELKLNNGKNYQVWIDY--ADSFINITMVEAGMKRPKRPLLSVPLNLSGVLEDEMYVGFT  257 (705)
Q Consensus       180 ~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~I~Y--~~~~~~v~~~~~~~~~~~~~~ls~~vdl~~~l~~~~~vGfs  257 (705)
                                        ......+.+|+.++|||+|  ..++|.|++.... .+|..|+++..+||+.+|+++||||||
T Consensus       158 ------------------~~~~~~l~~g~~~~v~I~Yd~~~~~L~V~l~~~~-~~~~~~~l~~~vdL~~~l~~~v~vGFs  218 (236)
T PF00139_consen  158 ------------------SSPSFSLSDGKWHTVWIDYDASTKRLSVYLDDNS-SKPSSPVLSVNVDLSAVLPEQVYVGFS  218 (236)
T ss_dssp             ------------------EEEEHHHGTTSEEEEEEEEETTTTEEEEEEEETT-TTSEEEEEEEE--HHHHSCSEEEEEEE
T ss_pred             ------------------ccccccccCCcEEEEEEEEcCCccEEEEEEeccc-CCCcceeEEEEEchHHhcCCCcEEEEE
Confidence                              1256789999999999999  5579999998874 688889999999999999999999999


Q ss_pred             cccccccccceeeeeeec
Q 005257          258 AATGQLVESHKILAWSFS  275 (705)
Q Consensus       258 astg~~~~~h~i~~wsf~  275 (705)
                      ||||...|.|.|++|+|+
T Consensus       219 asTG~~~~~h~I~sW~F~  236 (236)
T PF00139_consen  219 ASTGGSYQTHDILSWSFS  236 (236)
T ss_dssp             EEESSSSEEEEEEEEEEE
T ss_pred             eecCCCcceEEEEEEEeC
Confidence            999999999999999995

Leguminous plant lectins resemble each other in their physicochemical properties although they differ in their carbohydrate specificities. They consist of two or four subunits with relative molecular mass of 30 kDa and each subunit has one carbohydrate-binding site. The interaction with sugars requires tightly bound calcium and manganese ions. The structural similarities of these lectins are reported by the primary structural analyses and X-ray crystallographic studies. X-ray studies have shown that the folding of the polypeptide chains in the region of the carbohydrate-binding sites is also similar, despite differences in the primary sequences. The carbohydrate-binding sites of these lectins consist of two conserved amino acids on beta pleated sheets. One of these loops contains transition metals, calcium and manganese, which keep the amino acid residues of the sugar-binding site at the required positions. Amino acid sequences of this loop play an important role in the carbohydrate-binding specificities of these lectins. These lectins bind either glucose/mannose or galactose. The exact function of legume lectins is not known but they may be involved in the attachment of nitrogen-fixing bacteria to legumes and in the protection against pathogens. Some legume lectins are proteolytically processed to produce two chains, beta (which corresponds to the N-terminal) and alpha (C-terminal) (IPR000985 from INTERPRO). The lectin concanavalin A (conA) from jack bean is exceptional in that the two chains are transposed and ligated (by formation of a new peptide bond). The N terminus of mature conA thus corresponds to that of the alpha chain and the C terminus to the beta chain.; GO: 0005488 binding; PDB: 1VLN_B 2GDF_C 2JE9_C 2JEC_C 1DGL_B 2P37_B 2CWM_A 2P34_D 2OW4_A 3IPV_B ....

>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]

Probab=100.00  E-value=5.6e-47  Score=386.90  Aligned_cols=258  Identities=27%  Similarity=0.437  Sum_probs=215.0

Q ss_pred             ccCHHHHHHHhCCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCC-chhHHHHHHHHHHhccCCCCCcceeeeeee
Q 005257          353 RITYQEIEAATKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHEN-DGGTRAFLAEISSLGRLKHKSLVGLRGWCK  431 (705)
Q Consensus       353 ~~~~~el~~at~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~-~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~  431 (705)
                      .++..|++.       .+.||+|..|+|||+.++.+++.+|+|.+.... ....+++.+|++++++.+||+||+++|.|.
T Consensus        75 ~i~~~dle~-------~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~  147 (364)
T KOG0581|consen   75 GISLSDLER-------LGVLGSGNGGTVYKVRHKPTGKIYALKVILLNIDPALQKQILRELEILRSCQSPYIVGFYGAFY  147 (364)
T ss_pred             ccCHHHhhh-------hhhcccCCCcEEEEEEEcCCCeEEEEEeecccCCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEE
Confidence            355556554       678999999999999999999999999996553 445678999999999999999999999998


Q ss_pred             eccCceEEEEeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeee
Q 005257          432 REKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGD  511 (705)
Q Consensus       432 ~~~~~~~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~D  511 (705)
                      .+...+.|+||||++|||++++...+   ++++..+-+|+.+|++||.|||+  +++||||||||+|||++..|.+||||
T Consensus       148 ~~~~~isI~mEYMDgGSLd~~~k~~g---~i~E~~L~~ia~~VL~GL~YLh~--~~~IIHRDIKPsNlLvNskGeVKicD  222 (364)
T KOG0581|consen  148 SNGEEISICMEYMDGGSLDDILKRVG---RIPEPVLGKIARAVLRGLSYLHE--ERKIIHRDIKPSNLLVNSKGEVKICD  222 (364)
T ss_pred             eCCceEEeehhhcCCCCHHHHHhhcC---CCCHHHHHHHHHHHHHHHHHHhh--ccCeeeccCCHHHeeeccCCCEEecc
Confidence            73335999999999999999997643   69999999999999999999996  39999999999999999999999999


Q ss_pred             eccceecCCCCcceeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhH
Q 005257          512 FGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLD  591 (705)
Q Consensus       512 FGla~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~  591 (705)
                      ||.+......   .....+||..|||||.+.+..|+.++||||||+.++|+++|+.|+....+....+          .+
T Consensus       223 FGVS~~lvnS---~a~tfvGT~~YMsPERi~g~~Ys~~sDIWSLGLsllE~a~GrfP~~~~~~~~~~~----------~~  289 (364)
T KOG0581|consen  223 FGVSGILVNS---IANTFVGTSAYMSPERISGESYSVKSDIWSLGLSLLELAIGRFPYPPPNPPYLDI----------FE  289 (364)
T ss_pred             ccccHHhhhh---hcccccccccccChhhhcCCcCCcccceecccHHHHHHhhCCCCCCCcCCCCCCH----------HH
Confidence            9999877554   3345799999999999999999999999999999999999999998742211111          12


Q ss_pred             HHHHhhh-cCCCCCHH-HHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 005257          592 ALDARLR-AKGGFDED-EVERVLHLGLLCAYPDPRARPTMRQVVKV  635 (705)
Q Consensus       592 ~id~~l~-~~~~~~~~-~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  635 (705)
                      .++.... ..+..+.+ +.+++..++..|+++||.+||+++|++++
T Consensus       290 Ll~~Iv~~ppP~lP~~~fS~ef~~FV~~CL~Kdp~~R~s~~qLl~H  335 (364)
T KOG0581|consen  290 LLCAIVDEPPPRLPEGEFSPEFRSFVSCCLRKDPSERPSAKQLLQH  335 (364)
T ss_pred             HHHHHhcCCCCCCCcccCCHHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence            2222221 11233333 66789999999999999999999999885

>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]

Probab=100.00  E-value=9.7e-47  Score=403.25  Aligned_cols=253  Identities=36%  Similarity=0.584  Sum_probs=210.8

Q ss_pred             ceEEeecCceEEEEEEEcCCCeE-EEEEEeccCCc--hhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEEEEeeCC
Q 005257          369 ENVIGVGGNGKVYKGVLEGGGAE-IAVKRISHEND--GGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYME  445 (705)
Q Consensus       369 ~~~LG~G~fg~Vy~~~~~~~~~~-vavK~i~~~~~--~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~lV~E~~~  445 (705)
                      .+.||+|+||+||+|.+++  .. ||||++.....  ...++|.+|+.+|.+++|||||+++|+|.+....++||||||+
T Consensus        46 ~~~iG~G~~g~V~~~~~~g--~~~vavK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~f~G~~~~~~~~~~iVtEy~~  123 (362)
T KOG0192|consen   46 EEVLGSGSFGTVYKGKWRG--TDVVAVKIISDPDFDDESRKAFRREASLLSRLRHPNIVQFYGACTSPPGSLCIVTEYMP  123 (362)
T ss_pred             hhhcccCCceeEEEEEeCC--ceeEEEEEecchhcChHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCceEEEEEeCC
Confidence            4459999999999999984  44 99999976532  2256899999999999999999999999874447899999999


Q ss_pred             CCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCC-eeecCCCCCCeEEccCC-CeeeeeeccceecCCCCc
Q 005257          446 NGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKK-VLHRDIKSSNVLLDKEM-NGRLGDFGLARMHGHGQV  523 (705)
Q Consensus       446 ~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~-iiHrDLkp~NILld~~~-~~kL~DFGla~~~~~~~~  523 (705)
                      +|+|.++|+.. ....+++..+++++.|||+||.|||+   .+ ||||||||+|||++.++ ++||+|||+++...... 
T Consensus       124 ~GsL~~~l~~~-~~~~l~~~~~l~~aldiArGm~YLH~---~~~iIHrDLK~~NiLv~~~~~~~KI~DFGlsr~~~~~~-  198 (362)
T KOG0192|consen  124 GGSLSVLLHKK-RKRKLPLKVRLRIALDIARGMEYLHS---EGPIIHRDLKSDNILVDLKGKTLKIADFGLSREKVISK-  198 (362)
T ss_pred             CCcHHHHHhhc-ccCCCCHHHHHHHHHHHHHHHHHHhc---CCCeeecccChhhEEEcCCCCEEEECCCccceeecccc-
Confidence            99999999875 23379999999999999999999998   67 99999999999999997 99999999998765432 


Q ss_pred             ceeeeeeccccCCCccccc--cCCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhHHHHHhhhcCC
Q 005257          524 ASTTRVVGTVGYLAPEVFS--SGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRAKG  601 (705)
Q Consensus       524 ~~~~~~~gt~~y~APE~~~--~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~l~~~~  601 (705)
                      ...+...||+.|||||++.  ...++.|+|||||||++|||+||+.||.....  .+........+.         +  .
T Consensus       199 ~~~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~--~~~~~~v~~~~~---------R--p  265 (362)
T KOG0192|consen  199 TSMTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIPFEDLAP--VQVASAVVVGGL---------R--P  265 (362)
T ss_pred             ccccCCCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCCCCCCCH--HHHHHHHHhcCC---------C--C
Confidence            2233368999999999999  56899999999999999999999999987654  222222222221         1  3


Q ss_pred             CCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHhccc
Q 005257          602 GFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLEGKIE  641 (705)
Q Consensus       602 ~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~  641 (705)
                      ..+..+...+..++..||+.||..||++.+++..|+....
T Consensus       266 ~~p~~~~~~l~~l~~~CW~~dp~~RP~f~ei~~~l~~~~~  305 (362)
T KOG0192|consen  266 PIPKECPPHLSSLMERCWLVDPSRRPSFLEIVSRLESIMS  305 (362)
T ss_pred             CCCccCCHHHHHHHHHhCCCCCCcCCCHHHHHHHHHHHHH
Confidence            3444577888999999999999999999999999986654

>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]

Probab=100.00  E-value=7.5e-46  Score=395.26  Aligned_cols=253  Identities=30%  Similarity=0.517  Sum_probs=213.5

Q ss_pred             cceEEeecCceEEEEEEEcCCCeEEEEEEeccCCchhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEEEEeeCCCC
Q 005257          368 EENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENG  447 (705)
Q Consensus       368 ~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~lV~E~~~~g  447 (705)
                      ..+.||+|.||.||.|.++. ...||+|.++.. ....++|++|+++|++|+|+|||+++|+|.. ++.++||||||+.|
T Consensus       210 l~~~LG~G~FG~V~~g~~~~-~~~vavk~ik~~-~m~~~~f~~Ea~iMk~L~H~~lV~l~gV~~~-~~piyIVtE~m~~G  286 (468)
T KOG0197|consen  210 LIRELGSGQFGEVWLGKWNG-STKVAVKTIKEG-SMSPEAFLREAQIMKKLRHEKLVKLYGVCTK-QEPIYIVTEYMPKG  286 (468)
T ss_pred             HHHHhcCCccceEEEEEEcC-CCcccceEEecc-ccChhHHHHHHHHHHhCcccCeEEEEEEEec-CCceEEEEEecccC
Confidence            36779999999999999985 357999998654 3455789999999999999999999999987 44799999999999


Q ss_pred             ChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecCCCCcceee
Q 005257          448 SLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTT  527 (705)
Q Consensus       448 sL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~~~~~~~~~  527 (705)
                      +|.++|.... +..+...+.+.++.|||+||+||++   +++|||||.++|||++++..+||+||||||...++......
T Consensus       287 sLl~yLr~~~-~~~l~~~~Ll~~a~qIaeGM~YLes---~~~IHRDLAARNiLV~~~~~vKIsDFGLAr~~~d~~Y~~~~  362 (468)
T KOG0197|consen  287 SLLDYLRTRE-GGLLNLPQLLDFAAQIAEGMAYLES---KNYIHRDLAARNILVDEDLVVKISDFGLARLIGDDEYTASE  362 (468)
T ss_pred             cHHHHhhhcC-CCccchHHHHHHHHHHHHHHHHHHh---CCccchhhhhhheeeccCceEEEcccccccccCCCceeecC
Confidence            9999998733 3479999999999999999999999   99999999999999999999999999999966655544433


Q ss_pred             eeeccccCCCccccccCCCCccccEEEEehhHHHHhh-CCCCCCCCCccHHHHHHHHHHhCchhHHHHHhhhcCCCCCHH
Q 005257          528 RVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLS-GRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRAKGGFDED  606 (705)
Q Consensus       528 ~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~Ellt-G~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~l~~~~~~~~~  606 (705)
                      ...-+..|.|||.+..++++.|||||||||+||||+| |+.|+.....   ..+         .+.++...+  -..+..
T Consensus       363 ~~kfPIkWtAPEa~~~~~FS~kSDVWSFGVlL~E~fT~G~~py~~msn---~ev---------~~~le~GyR--lp~P~~  428 (468)
T KOG0197|consen  363 GGKFPIKWTAPEALNYGKFSSKSDVWSFGVLLWELFTYGRVPYPGMSN---EEV---------LELLERGYR--LPRPEG  428 (468)
T ss_pred             CCCCCceecCHHHHhhCCcccccceeehhhhHHHHhccCCCCCCCCCH---HHH---------HHHHhccCc--CCCCCC
Confidence            3344678999999999999999999999999999999 9999876542   222         334444333  234566


Q ss_pred             HHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHhccc
Q 005257          607 EVERVLHLGLLCAYPDPRARPTMRQVVKVLEGKIE  641 (705)
Q Consensus       607 ~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~  641 (705)
                      ++..+.++|..||+.+|++|||++.+...|+....
T Consensus       429 CP~~vY~lM~~CW~~~P~~RPtF~~L~~~l~~~~~  463 (468)
T KOG0197|consen  429 CPDEVYELMKSCWHEDPEDRPTFETLREVLEDFFT  463 (468)
T ss_pred             CCHHHHHHHHHHhhCCcccCCCHHHHHHHHHHhhh
Confidence            88889999999999999999999999888876543

>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=3e-46  Score=366.02  Aligned_cols=260  Identities=24%  Similarity=0.351  Sum_probs=215.7

Q ss_pred             CCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccC--CchhHHHHHHHHHHhccCCCCCcceeeeeeeeccCc-eEEEE
Q 005257          365 GFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHE--NDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGS-LMLVY  441 (705)
Q Consensus       365 ~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~--~~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~-~~lV~  441 (705)
                      +|.+.++||+|.||+|||+....+|..+|.|.++-.  +....++...|+.+|++|+|||||+++++-..+++. ++|||
T Consensus        20 ~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~~~evlnivm   99 (375)
T KOG0591|consen   20 DYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQLNHPNIVQYYAHSFIEDNEVLNIVM   99 (375)
T ss_pred             HHHHHHHHcCCcchheEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHHHHHhcCCchHHHHHHHhhhccchhhHHHH
Confidence            366688899999999999999999999999999754  345567899999999999999999999965544555 89999


Q ss_pred             eeCCCCChhHHHHhcC-CCCcccHHHHHHHHHHHHHHHHHHhcCCCC-CeeecCCCCCCeEEccCCCeeeeeeccceecC
Q 005257          442 DYMENGSLDKWIFQCD-GSMMLSCEERIRVLKDVAAGVLYLHEGWEK-KVLHRDIKSSNVLLDKEMNGRLGDFGLARMHG  519 (705)
Q Consensus       442 E~~~~gsL~~~L~~~~-~~~~l~~~~~~~i~~qia~gL~yLH~~~~~-~iiHrDLkp~NILld~~~~~kL~DFGla~~~~  519 (705)
                      ||+..|+|...++..+ ....+++..+++++.|++.||.++|+.+.+ -|+||||||.||+|+.+|.+||+||||++.+.
T Consensus       100 E~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~~~gvvKLGDfGL~r~l~  179 (375)
T KOG0591|consen  100 ELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFLTANGVVKLGDFGLGRFLS  179 (375)
T ss_pred             HhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEEcCCCceeeccchhHhHhc
Confidence            9999999999997643 344799999999999999999999986644 49999999999999999999999999999887


Q ss_pred             CCCcceeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhHHHHHhhhc
Q 005257          520 HGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRA  599 (705)
Q Consensus       520 ~~~~~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~l~~  599 (705)
                      .... .....+|||.||+||.+...+|+.||||||+||++|||+.-+.||.+..  + ..+.+.+.+|+...        
T Consensus       180 s~~t-fA~S~VGTPyYMSPE~i~~~~Y~~kSDiWslGCllyEMcaL~~PF~g~n--~-~~L~~KI~qgd~~~--------  247 (375)
T KOG0591|consen  180 SKTT-FAHSLVGTPYYMSPERIHESGYNFKSDIWSLGCLLYEMCALQSPFYGDN--L-LSLCKKIEQGDYPP--------  247 (375)
T ss_pred             chhH-HHHhhcCCCcccCHHHHhcCCCCcchhHHHHHHHHHHHHhcCCCccccc--H-HHHHHHHHcCCCCC--------
Confidence            5543 3345799999999999999999999999999999999999999998762  2 23345555554321        


Q ss_pred             CCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHh
Q 005257          600 KGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLEG  638 (705)
Q Consensus       600 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  638 (705)
                        -++......+..|+..|+.+||+.||+.-.+++.+..
T Consensus       248 --~p~~~YS~~l~~li~~ci~vd~~~RP~t~~~v~di~~  284 (375)
T KOG0591|consen  248 --LPDEHYSTDLRELINMCIAVDPEQRPDTVPYVQDIQS  284 (375)
T ss_pred             --CcHHHhhhHHHHHHHHHccCCcccCCCcchHHHHHHH
Confidence              1124566789999999999999999995555554443

>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=2.7e-44  Score=386.68  Aligned_cols=249  Identities=25%  Similarity=0.418  Sum_probs=214.0

Q ss_pred             CCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccC---CchhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEEE
Q 005257          364 KGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHE---NDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLV  440 (705)
Q Consensus       364 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~---~~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~lV  440 (705)
                      .+|...+.||+|||+.||+++...+|+.||+|++.+.   .....+...+||++.+.|+|||||++++++.+ .+..|||
T Consensus        18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~FED-s~nVYiv   96 (592)
T KOG0575|consen   18 KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHFFED-SNNVYIV   96 (592)
T ss_pred             ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeEeec-CCceEEE
Confidence            5688899999999999999999889999999999764   44566789999999999999999999998876 7899999


Q ss_pred             EeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecCC
Q 005257          441 YDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGH  520 (705)
Q Consensus       441 ~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~~  520 (705)
                      .|+|++++|..++++.   ..+++.+++.+++||+.||.|||+   ++|||||||-.|+||+++.++||+|||||.....
T Consensus        97 LELC~~~sL~el~Krr---k~ltEpEary~l~QIv~GlkYLH~---~~IiHRDLKLGNlfL~~~~~VKIgDFGLAt~le~  170 (592)
T KOG0575|consen   97 LELCHRGSLMELLKRR---KPLTEPEARYFLRQIVEGLKYLHS---LGIIHRDLKLGNLFLNENMNVKIGDFGLATQLEY  170 (592)
T ss_pred             EEecCCccHHHHHHhc---CCCCcHHHHHHHHHHHHHHHHHHh---cCceecccchhheeecCcCcEEecccceeeeecC
Confidence            9999999999999743   379999999999999999999999   9999999999999999999999999999998876


Q ss_pred             CCcceeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhHHHHHhhhcC
Q 005257          521 GQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRAK  600 (705)
Q Consensus       521 ~~~~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~l~~~  600 (705)
                      +..... ..+|||.|+|||++....++..+||||+||++|-|+.|++||+....   ......+...            .
T Consensus       171 ~~Erk~-TlCGTPNYIAPEVl~k~gHsfEvDiWSlGcvmYtLL~G~PPFetk~v---kety~~Ik~~------------~  234 (592)
T KOG0575|consen  171 DGERKK-TLCGTPNYIAPEVLNKSGHSFEVDIWSLGCVMYTLLVGRPPFETKTV---KETYNKIKLN------------E  234 (592)
T ss_pred             cccccc-eecCCCcccChhHhccCCCCCchhhhhhhhHHHhhhhCCCCcccchH---HHHHHHHHhc------------C
Confidence            544443 47999999999999999999999999999999999999999986431   1111111111            1


Q ss_pred             CCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 005257          601 GGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKV  635 (705)
Q Consensus       601 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  635 (705)
                      ...+........+|+...|++||.+|||+.+|+.+
T Consensus       235 Y~~P~~ls~~A~dLI~~lL~~~P~~Rpsl~~vL~h  269 (592)
T KOG0575|consen  235 YSMPSHLSAEAKDLIRKLLRPNPSERPSLDEVLDH  269 (592)
T ss_pred             cccccccCHHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence            22333445667889999999999999999999874

>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]

Probab=100.00  E-value=3.6e-45  Score=399.09  Aligned_cols=269  Identities=30%  Similarity=0.520  Sum_probs=227.7

Q ss_pred             ccCHHHHHHHhCC---------CCcceEEeecCceEEEEEEEcCCC---eEEEEEEeccCC-chhHHHHHHHHHHhccCC
Q 005257          353 RITYQEIEAATKG---------FSEENVIGVGGNGKVYKGVLEGGG---AEIAVKRISHEN-DGGTRAFLAEISSLGRLK  419 (705)
Q Consensus       353 ~~~~~el~~at~~---------f~~~~~LG~G~fg~Vy~~~~~~~~---~~vavK~i~~~~-~~~~~~~~~Ei~~l~~l~  419 (705)
                      .++|+|-..|-..         ..++++||.|.||.||+|.++..+   ..||||.++... ....++|+.|..||.+++
T Consensus       609 P~TYEDPnqAvreFakEId~s~i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~GytekqrrdFL~EAsIMGQFd  688 (996)
T KOG0196|consen  609 PHTYEDPNQAVREFAKEIDPSCVKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGYTEKQRRDFLSEASIMGQFD  688 (996)
T ss_pred             CccccCccHHHHHhhhhcChhheEEEEEEecccccceecccccCCCCcceeEEEeeeccCccHHHHhhhhhhhhhcccCC
Confidence            3566655444333         456789999999999999998655   579999998764 456789999999999999


Q ss_pred             CCCcceeeeeeeeccCceEEEEeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCe
Q 005257          420 HKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNV  499 (705)
Q Consensus       420 Hpniv~l~g~~~~~~~~~~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NI  499 (705)
                      ||||++|.|+... ....+||.|||+||+|+.+|+++++  .+++.++.-++++||.||.||-+   .++|||||.++||
T Consensus       689 HPNIIrLEGVVTk-s~PvMIiTEyMENGsLDsFLR~~DG--qftviQLVgMLrGIAsGMkYLsd---m~YVHRDLAARNI  762 (996)
T KOG0196|consen  689 HPNIIRLEGVVTK-SKPVMIITEYMENGSLDSFLRQNDG--QFTVIQLVGMLRGIASGMKYLSD---MNYVHRDLAARNI  762 (996)
T ss_pred             CCcEEEEEEEEec-CceeEEEhhhhhCCcHHHHHhhcCC--ceEeehHHHHHHHHHHHhHHHhh---cCchhhhhhhhhe
Confidence            9999999999876 6678999999999999999998875  49999999999999999999998   9999999999999


Q ss_pred             EEccCCCeeeeeeccceecCCCCcceeeeeec--cccCCCccccccCCCCccccEEEEehhHHHHhh-CCCCCCCCCccH
Q 005257          500 LLDKEMNGRLGDFGLARMHGHGQVASTTRVVG--TVGYLAPEVFSSGRASTQTDVFGFGILILEVLS-GRRPIEEGKPNL  576 (705)
Q Consensus       500 Lld~~~~~kL~DFGla~~~~~~~~~~~~~~~g--t~~y~APE~~~~~~~s~ksDVwS~Gvvl~Ellt-G~~Pf~~~~~~~  576 (705)
                      |++.+..+|++||||+|...++.....+..-|  +.+|.|||.+...+++.++||||||||+||+++ |.+||-+-.+  
T Consensus       763 LVNsnLvCKVsDFGLSRvledd~~~~ytt~GGKIPiRWTAPEAIa~RKFTsASDVWSyGIVmWEVmSyGERPYWdmSN--  840 (996)
T KOG0196|consen  763 LVNSNLVCKVSDFGLSRVLEDDPEAAYTTLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSN--  840 (996)
T ss_pred             eeccceEEEeccccceeecccCCCccccccCCccceeecChhHhhhcccCchhhccccceEEEEecccCCCcccccch--
Confidence            99999999999999999886655333333333  578999999999999999999999999999887 9999865432  


Q ss_pred             HHHHHHHHHhCchhHHHHHhhhcCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHhccc
Q 005257          577 VEMVWELMVQGKLLDALDARLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLEGKIE  641 (705)
Q Consensus       577 ~~~v~~~~~~~~~~~~id~~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~  641 (705)
                                .++...++...+  ...+.+++..|.+|++.||++|-.+||.+.||+..|++++.
T Consensus       841 ----------QdVIkaIe~gyR--LPpPmDCP~aL~qLMldCWqkdR~~RP~F~qiV~~lDklIr  893 (996)
T KOG0196|consen  841 ----------QDVIKAIEQGYR--LPPPMDCPAALYQLMLDCWQKDRNRRPKFAQIVSTLDKLIR  893 (996)
T ss_pred             ----------HHHHHHHHhccC--CCCCCCCcHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhc
Confidence                      123344444444  34567899999999999999999999999999999998876

>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]

Probab=100.00  E-value=4.9e-44  Score=368.03  Aligned_cols=202  Identities=29%  Similarity=0.520  Sum_probs=182.1

Q ss_pred             hCCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccC--CchhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEEE
Q 005257          363 TKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHE--NDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLV  440 (705)
Q Consensus       363 t~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~--~~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~lV  440 (705)
                      ..+|...+.||+|+|++||+|+++.++..||||.+.+.  .....+-...|+++|+.++|||||++++++.. ++.+|||
T Consensus         9 ~~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~-~~~i~lV   87 (429)
T KOG0595|consen    9 VGDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKELKHPNIVRLLDCIED-DDFIYLV   87 (429)
T ss_pred             cccceehhhccCcceEEEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhcCCcceeeEEEEEec-CCeEEEE
Confidence            35678888899999999999999999999999999876  45556678899999999999999999998776 7799999


Q ss_pred             EeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccC------CCeeeeeecc
Q 005257          441 YDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKE------MNGRLGDFGL  514 (705)
Q Consensus       441 ~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~------~~~kL~DFGl  514 (705)
                      ||||.+|+|.+||+..+   .+++.....++.|+|.||++||+   ++||||||||.||||+..      -.+||+|||+
T Consensus        88 MEyC~gGDLs~yi~~~~---~l~e~t~r~Fm~QLA~alq~L~~---~~IiHRDLKPQNiLLs~~~~~~~~~~LKIADFGf  161 (429)
T KOG0595|consen   88 MEYCNGGDLSDYIRRRG---RLPEATARHFMQQLASALQFLHE---NNIIHRDLKPQNILLSTTARNDTSPVLKIADFGF  161 (429)
T ss_pred             EEeCCCCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHH---CCeeeccCCcceEEeccCCCCCCCceEEecccch
Confidence            99999999999998754   69999999999999999999999   999999999999999864      4589999999


Q ss_pred             ceecCCCCcceeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhhCCCCCCCCC
Q 005257          515 ARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGK  573 (705)
Q Consensus       515 a~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~  573 (705)
                      ||.+..+...  ...+|++.|||||++..++|+.|+|+||.|++|||+++|+.||....
T Consensus       162 AR~L~~~~~a--~tlcGSplYMAPEV~~~~~YdAKADLWSiG~Ilyq~l~g~~Pf~a~t  218 (429)
T KOG0595|consen  162 ARFLQPGSMA--ETLCGSPLYMAPEVIMSQQYDAKADLWSIGTILYQCLTGKPPFDAET  218 (429)
T ss_pred             hhhCCchhHH--HHhhCCccccCHHHHHhccccchhhHHHHHHHHHHHHhCCCCccccC
Confidence            9988755433  34799999999999999999999999999999999999999998644

>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=6.2e-44  Score=366.49  Aligned_cols=256  Identities=26%  Similarity=0.400  Sum_probs=209.3

Q ss_pred             hCCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCCch-------hHHHHHHHHHHhccCCCCCcceeeeeeeeccC
Q 005257          363 TKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDG-------GTRAFLAEISSLGRLKHKSLVGLRGWCKREKG  435 (705)
Q Consensus       363 t~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~~-------~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~  435 (705)
                      .+.|...+.||+|+||.|-+|+.+.+|+.||||++++....       ......+|+++|++|+|||||++++++.. ..
T Consensus       171 ~d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f~~-~d  249 (475)
T KOG0615|consen  171 NDYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFFEV-PD  249 (475)
T ss_pred             cceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeeeec-CC
Confidence            34577789999999999999999999999999999765211       12335799999999999999999999886 66


Q ss_pred             ceEEEEeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccC---CCeeeeee
Q 005257          436 SLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKE---MNGRLGDF  512 (705)
Q Consensus       436 ~~~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~---~~~kL~DF  512 (705)
                      ..|+|||||+||+|.+.+-.++   .+.+....-+++|++.|+.|||+   +||+||||||+|||+..+   ..+||+||
T Consensus       250 s~YmVlE~v~GGeLfd~vv~nk---~l~ed~~K~~f~Qll~avkYLH~---~GI~HRDiKPeNILl~~~~e~~llKItDF  323 (475)
T KOG0615|consen  250 SSYMVLEYVEGGELFDKVVANK---YLREDLGKLLFKQLLTAVKYLHS---QGIIHRDIKPENILLSNDAEDCLLKITDF  323 (475)
T ss_pred             ceEEEEEEecCccHHHHHHhcc---ccccchhHHHHHHHHHHHHHHHH---cCcccccCCcceEEeccCCcceEEEeccc
Confidence            7899999999999999997654   57888889999999999999999   999999999999999765   77999999


Q ss_pred             ccceecCCCCcceeeeeeccccCCCccccccCC---CCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCch
Q 005257          513 GLARMHGHGQVASTTRVVGTVGYLAPEVFSSGR---ASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKL  589 (705)
Q Consensus       513 Gla~~~~~~~~~~~~~~~gt~~y~APE~~~~~~---~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~  589 (705)
                      |+|+..+..  ..+...+||+.|.|||++.+..   +..++|+||+|||||-+++|.+||.+.....  -..+.+.+|++
T Consensus       324 GlAK~~g~~--sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~~--sl~eQI~~G~y  399 (475)
T KOG0615|consen  324 GLAKVSGEG--SFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEYTDP--SLKEQILKGRY  399 (475)
T ss_pred             chhhccccc--eehhhhcCCccccChhheecCCeecccchheeeeccceEEEEeccCCCcccccCCc--cHHHHHhcCcc
Confidence            999987644  3455689999999999997654   3458899999999999999999998643321  12334444443


Q ss_pred             hHHHHHhhhcCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHH
Q 005257          590 LDALDARLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLE  637 (705)
Q Consensus       590 ~~~id~~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  637 (705)
                      ...        ........++.++++.++|..||++|||+.|++++=.
T Consensus       400 ~f~--------p~~w~~Iseea~dlI~~mL~VdP~~R~s~~eaL~hpW  439 (475)
T KOG0615|consen  400 AFG--------PLQWDRISEEALDLINWMLVVDPENRPSADEALNHPW  439 (475)
T ss_pred             ccc--------ChhhhhhhHHHHHHHHHhhEeCcccCcCHHHHhcChh
Confidence            211        1223345678899999999999999999999998644

>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]

Probab=100.00  E-value=4.1e-44  Score=399.07  Aligned_cols=262  Identities=26%  Similarity=0.467  Sum_probs=224.0

Q ss_pred             HhCCCCcceEEeecCceEEEEEEEcC-----CCeEEEEEEeccCCch-hHHHHHHHHHHhccCCCCCcceeeeeeeeccC
Q 005257          362 ATKGFSEENVIGVGGNGKVYKGVLEG-----GGAEIAVKRISHENDG-GTRAFLAEISSLGRLKHKSLVGLRGWCKREKG  435 (705)
Q Consensus       362 at~~f~~~~~LG~G~fg~Vy~~~~~~-----~~~~vavK~i~~~~~~-~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~  435 (705)
                      .+.+....+.||+|.||+||+|...+     ....||||.++..... ..++|.+|++++..|+|||||+++|+|.+ ++
T Consensus       484 ~r~~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~~~~~dF~REaeLla~l~H~nIVrLlGVC~~-~~  562 (774)
T KOG1026|consen  484 PRSDIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAENQARQDFRREAELLAELQHPNIVRLLGVCRE-GD  562 (774)
T ss_pred             chhheeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEcc-CC
Confidence            34455667889999999999998753     3467999999888666 78899999999999999999999999997 77


Q ss_pred             ceEEEEeeCCCCChhHHHHhcCC-------C----CcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccC
Q 005257          436 SLMLVYDYMENGSLDKWIFQCDG-------S----MMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKE  504 (705)
Q Consensus       436 ~~~lV~E~~~~gsL~~~L~~~~~-------~----~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~  504 (705)
                      .+++|+|||..|+|.++|.....       .    .+|+..+.+.|+.|||.||.||-+   +.+|||||..+|+|+.++
T Consensus       563 P~~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~---~~FVHRDLATRNCLVge~  639 (774)
T KOG1026|consen  563 PLCMVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSS---HHFVHRDLATRNCLVGEN  639 (774)
T ss_pred             eeEEEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHh---Ccccccchhhhhceeccc
Confidence            89999999999999999975321       1    238999999999999999999998   999999999999999999


Q ss_pred             CCeeeeeeccceecCCCCcceee-eeeccccCCCccccccCCCCccccEEEEehhHHHHhh-CCCCCCCCCccHHHHHHH
Q 005257          505 MNGRLGDFGLARMHGHGQVASTT-RVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLS-GRRPIEEGKPNLVEMVWE  582 (705)
Q Consensus       505 ~~~kL~DFGla~~~~~~~~~~~~-~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~Ellt-G~~Pf~~~~~~~~~~v~~  582 (705)
                      ..+||+||||+|..-..+..... .-.-..+||+||.+..+++|++||||||||||||+++ |+.||.+...   +.|.+
T Consensus       640 l~VKIsDfGLsRdiYssDYYk~~~~t~lPIRWMppEsIly~kFTteSDVWs~GVvLWEIFsyG~QPy~glSn---~EVIe  716 (774)
T KOG1026|consen  640 LVVKISDFGLSRDIYSSDYYKVRGNTLLPIRWMPPESILYGKFTTESDVWSFGVVLWEIFSYGKQPYYGLSN---QEVIE  716 (774)
T ss_pred             eEEEecccccchhhhhhhhhcccCCceeeeecCCHHHhhcCcccchhhhhhhhhhhhhhhccccCcccccch---HHHHH
Confidence            99999999999855433332211 2233689999999999999999999999999999999 9999987654   56677


Q ss_pred             HHHhCchhHHHHHhhhcCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHhccc
Q 005257          583 LMVQGKLLDALDARLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLEGKIE  641 (705)
Q Consensus       583 ~~~~~~~~~~id~~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~  641 (705)
                      .+++|.++           ..++.++..+..||..||+.+|.+||+++||-..|+...+
T Consensus       717 ~i~~g~lL-----------~~Pe~CP~~vY~LM~~CW~~~P~~RPsF~eI~~~L~~~~~  764 (774)
T KOG1026|consen  717 CIRAGQLL-----------SCPENCPTEVYSLMLECWNENPKRRPSFKEIHSRLQAWAQ  764 (774)
T ss_pred             HHHcCCcc-----------cCCCCCCHHHHHHHHHHhhcCcccCCCHHHHHHHHHHHHh
Confidence            77777764           3466788899999999999999999999999999987655

>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=1.5e-43  Score=372.03  Aligned_cols=279  Identities=25%  Similarity=0.363  Sum_probs=217.3

Q ss_pred             CCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCC--chhHHHHHHHHHHhccCCCCCcceeeeeeeec-cCceEEEEe
Q 005257          366 FSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHEN--DGGTRAFLAEISSLGRLKHKSLVGLRGWCKRE-KGSLMLVYD  442 (705)
Q Consensus       366 f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~--~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~-~~~~~lV~E  442 (705)
                      |+..++||+|.||.||||++..+|+.||+|++....  .+......+||.+|++|+||||++|.+...+. .+.+|||+|
T Consensus       119 feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~~~~siYlVFe  198 (560)
T KOG0600|consen  119 FEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRRLDHPNIIKLEEIVTSKLSGSIYLVFE  198 (560)
T ss_pred             HHHHHHhcCcchhheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhcCCCcccceeeEEEecCCceEEEEEe
Confidence            445667999999999999999999999999998764  44556678999999999999999999998875 468999999


Q ss_pred             eCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecCCCC
Q 005257          443 YMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQ  522 (705)
Q Consensus       443 ~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~~~~  522 (705)
                      ||+. +|.-++...  ...+++.++..+++|++.||+|||+   ++|+|||||.+|||||.+|.+||+|||||+++....
T Consensus       199 YMdh-DL~GLl~~p--~vkft~~qIKc~mkQLl~Gl~~cH~---~gvlHRDIK~SNiLidn~G~LKiaDFGLAr~y~~~~  272 (560)
T KOG0600|consen  199 YMDH-DLSGLLSSP--GVKFTEPQIKCYMKQLLEGLEYCHS---RGVLHRDIKGSNILIDNNGVLKIADFGLARFYTPSG  272 (560)
T ss_pred             cccc-hhhhhhcCC--CcccChHHHHHHHHHHHHHHHHHhh---cCeeeccccccceEEcCCCCEEeccccceeeccCCC
Confidence            9987 888887542  3369999999999999999999998   999999999999999999999999999999988777


Q ss_pred             cceeeeeeccccCCCccccccC-CCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhHHHHHhhhcCC
Q 005257          523 VASTTRVVGTVGYLAPEVFSSG-RASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRAKG  601 (705)
Q Consensus       523 ~~~~~~~~gt~~y~APE~~~~~-~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~l~~~~  601 (705)
                      ....+..+-|++|+|||++.+. .|+.++|+||.||||.||+.|+..|++..+                           
T Consensus       273 ~~~~T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~G~tE---------------------------  325 (560)
T KOG0600|consen  273 SAPYTSRVVTLWYRPPELLLGATSYGTAVDLWSVGCILAELFLGKPILQGRTE---------------------------  325 (560)
T ss_pred             CcccccceEEeeccChHHhcCCcccccceeehhhhHHHHHHHcCCCCcCCccH---------------------------
Confidence            6666667789999999999874 699999999999999999999999876432                           


Q ss_pred             CCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHhccc-----cCCCCCcchhhHHHHHHhhccccccccccccccCC
Q 005257          602 GFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLEGKIE-----AGIENETEDMDAYLLQQVKSKDMWANYSRSFGYGY  676 (705)
Q Consensus       602 ~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~  676 (705)
                            ++++-.|...|-.+.++--| ...+- ......+     .........+....++++..+.-.+|+.|.++..+
T Consensus       326 ------veQl~kIfklcGSP~e~~W~-~~kLP-~~~~~kp~~~y~r~l~E~~~~~~~~~l~Ll~~lL~ldP~kR~tA~~a  397 (560)
T KOG0600|consen  326 ------VEQLHKIFKLCGSPTEDYWP-VSKLP-HATIFKPQQPYKRRLRETFKDFPASALDLLEKLLSLDPDKRGTASSA  397 (560)
T ss_pred             ------HHHHHHHHHHhCCCChhccc-cccCC-cccccCCCCcccchHHHHhccCCHHHHHHHHHHhccCccccccHHHH
Confidence                  22222333334333333222 00000 0000000     00000122344556777777888999999999999


Q ss_pred             CCCCCcccc
Q 005257          677 ATHPTFHDI  685 (705)
Q Consensus       677 ~~hp~f~~~  685 (705)
                      +.|+||..-
T Consensus       398 L~seyF~t~  406 (560)
T KOG0600|consen  398 LQSEYFTTE  406 (560)
T ss_pred             hcCcccccC
Confidence            999999433

>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]

Probab=100.00  E-value=6.6e-43  Score=345.73  Aligned_cols=262  Identities=24%  Similarity=0.323  Sum_probs=206.7

Q ss_pred             CCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCCc-hh-HHHHHHHHHHhccCCCCCcceeeeeeeeccCceEEEE
Q 005257          364 KGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHEND-GG-TRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVY  441 (705)
Q Consensus       364 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~-~~-~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~lV~  441 (705)
                      +.|+...++|+|+||.|||++++++|+.||||++....+ .. .+--++||++|++|+|+|+|.++.+|.. +..++||+
T Consensus         2 ekYE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH~NLVnLiEVFrr-krklhLVF   80 (396)
T KOG0593|consen    2 EKYEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLKHENLVNLIEVFRR-KRKLHLVF   80 (396)
T ss_pred             cHHhhhhccccCcceEEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhcccchHHHHHHHHHh-cceeEEEe
Confidence            357778899999999999999999999999999865432 33 3446899999999999999999999987 78999999


Q ss_pred             eeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecCCC
Q 005257          442 DYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHG  521 (705)
Q Consensus       442 E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~~~  521 (705)
                      |||+. ++.+-|.....  .++...+.+++.|++.|+.|+|+   +++|||||||+|||++.++.+||||||.||.....
T Consensus        81 E~~dh-TvL~eLe~~p~--G~~~~~vk~~l~Q~l~ai~~cHk---~n~IHRDIKPENILit~~gvvKLCDFGFAR~L~~p  154 (396)
T KOG0593|consen   81 EYCDH-TVLHELERYPN--GVPSELVKKYLYQLLKAIHFCHK---NNCIHRDIKPENILITQNGVVKLCDFGFARTLSAP  154 (396)
T ss_pred             eecch-HHHHHHHhccC--CCCHHHHHHHHHHHHHHhhhhhh---cCeecccCChhheEEecCCcEEeccchhhHhhcCC
Confidence            99987 44444554433  48899999999999999999998   99999999999999999999999999999988743


Q ss_pred             CcceeeeeeccccCCCcccccc-CCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhHHHHHhhhcC
Q 005257          522 QVASTTRVVGTVGYLAPEVFSS-GRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRAK  600 (705)
Q Consensus       522 ~~~~~~~~~gt~~y~APE~~~~-~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~l~~~  600 (705)
                      . ...+..+.|.+|+|||.+.+ ..|...+||||.||++.||++|.+.|++... +.+.......-|++...-...+...
T Consensus       155 g-d~YTDYVATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG~SD-iDQLy~I~ktLG~L~prhq~iF~~N  232 (396)
T KOG0593|consen  155 G-DNYTDYVATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGEPLWPGRSD-IDQLYLIRKTLGNLIPRHQSIFSSN  232 (396)
T ss_pred             c-chhhhhhhhhhccChhhhcccCcCCCcccchhhhHHHHHHhcCCcCCCCcch-HHHHHHHHHHHcccCHHHHHHhccC
Confidence            2 23455788999999999988 6799999999999999999999998876542 2222222233344332211111110


Q ss_pred             CC-----------C------CHHHHHHHHHHHHHcCCCCCCCCCCHHHHHH
Q 005257          601 GG-----------F------DEDEVERVLHLGLLCAYPDPRARPTMRQVVK  634 (705)
Q Consensus       601 ~~-----------~------~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~  634 (705)
                      +.           .      -+....-+++++..|++.||.+|++.+|++.
T Consensus       233 ~~F~Gv~lP~~~~~epLe~k~p~~s~~~ld~~k~cL~~dP~~R~sc~qll~  283 (396)
T KOG0593|consen  233 PFFHGVRLPEPEHPEPLERKYPKISNVLLDLLKKCLKMDPDDRLSCEQLLH  283 (396)
T ss_pred             CceeeeecCCCCCccchhhhcccchHHHHHHHHHHhcCCccccccHHHHhc
Confidence            00           0      0122346889999999999999999999986

>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]

Probab=100.00  E-value=1e-42  Score=339.25  Aligned_cols=281  Identities=26%  Similarity=0.353  Sum_probs=224.7

Q ss_pred             CCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCC--chhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEEEE
Q 005257          364 KGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHEN--DGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVY  441 (705)
Q Consensus       364 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~--~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~lV~  441 (705)
                      .+|...++||+|.||.||+|++..+|+.||||+++...  +.-....++||+.|++++|+||+.+++++.. ...+.||+
T Consensus         2 ~rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~h~nIi~LiD~F~~-~~~l~lVf   80 (318)
T KOG0659|consen    2 DRYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDGINRTALREIKLLQELKHPNIIELIDVFPH-KSNLSLVF   80 (318)
T ss_pred             chhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeeccccccCccHHHHHHHHHHHHccCcchhhhhhhccC-CCceEEEE
Confidence            45777889999999999999999999999999997653  2334567999999999999999999998876 77899999


Q ss_pred             eeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecCCC
Q 005257          442 DYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHG  521 (705)
Q Consensus       442 E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~~~  521 (705)
                      |||+. +|...++...  ..++..++..++.++++||+|||+   +.|+||||||.|+|++++|.+||+|||+|+.+...
T Consensus        81 Efm~t-dLe~vIkd~~--i~l~pa~iK~y~~m~LkGl~y~H~---~~IlHRDlKPnNLLis~~g~lKiADFGLAr~f~~p  154 (318)
T KOG0659|consen   81 EFMPT-DLEVVIKDKN--IILSPADIKSYMLMTLKGLAYCHS---KWILHRDLKPNNLLISSDGQLKIADFGLARFFGSP  154 (318)
T ss_pred             Eeccc-cHHHHhcccc--cccCHHHHHHHHHHHHHHHHHHHh---hhhhcccCCccceEEcCCCcEEeecccchhccCCC
Confidence            99976 9999997644  379999999999999999999998   99999999999999999999999999999998876


Q ss_pred             CcceeeeeeccccCCCcccccc-CCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhHHHHHhhhcC
Q 005257          522 QVASTTRVVGTVGYLAPEVFSS-GRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRAK  600 (705)
Q Consensus       522 ~~~~~~~~~gt~~y~APE~~~~-~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~l~~~  600 (705)
                      ....+.. +-|.+|+|||.+.+ ..|+..+||||.||++.||+-|.+-|.+.. +              .++        
T Consensus       155 ~~~~~~~-V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELllr~P~fpG~s-D--------------idQ--------  210 (318)
T KOG0659|consen  155 NRIQTHQ-VVTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLLRVPFFPGDS-D--------------IDQ--------  210 (318)
T ss_pred             Ccccccc-eeeeeccChHHhccchhcCCcchhhhHHHHHHHHHccCCCCCCCc-h--------------HHH--------
Confidence            6554443 67999999999877 569999999999999999999876665432 1              122        


Q ss_pred             CCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHhc-cccCCCC-CcchhhHHHHHHhhccccccccccccccCCCC
Q 005257          601 GGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLEGK-IEAGIEN-ETEDMDAYLLQQVKSKDMWANYSRSFGYGYAT  678 (705)
Q Consensus       601 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~  678 (705)
                                +..+....-.+.|++-|.|.++-+..+-. .+..+.. -........++++.++..++|..|.++.++++
T Consensus       211 ----------L~~If~~LGTP~~~~WP~~~~lpdY~~~~~~P~~~~~~lf~aas~d~ldLl~~m~~ynP~~Rita~qaL~  280 (318)
T KOG0659|consen  211 ----------LSKIFRALGTPTPDQWPEMTSLPDYVKIQQFPKPPLNNLFPAASSDALDLLSKMLTYNPKKRITASQALK  280 (318)
T ss_pred             ----------HHHHHHHcCCCCcccCccccccccHHHHhcCCCCccccccccccHHHHHHHHhhhccCchhcccHHHHhc
Confidence                      22333333445666666666655444322 1211111 23334455688999999999999999999999


Q ss_pred             CCCcccc
Q 005257          679 HPTFHDI  685 (705)
Q Consensus       679 hp~f~~~  685 (705)
                      ||||...
T Consensus       281 ~~yf~~~  287 (318)
T KOG0659|consen  281 HPYFKSL  287 (318)
T ss_pred             chhhhcC
Confidence            9999853

>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=1.4e-43  Score=369.77  Aligned_cols=292  Identities=23%  Similarity=0.345  Sum_probs=221.7

Q ss_pred             hCCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCCchhHH-HHHHHHHHhccCC-CCCcceeeeeeeeccCceEEE
Q 005257          363 TKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTR-AFLAEISSLGRLK-HKSLVGLRGWCKREKGSLMLV  440 (705)
Q Consensus       363 t~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~~~~~-~~~~Ei~~l~~l~-Hpniv~l~g~~~~~~~~~~lV  440 (705)
                      .++|...++||.|.||.||+|+...+++.||||+++..-....+ .-++|++.|++|. ||||+++.+++.+.+..+++|
T Consensus         9 m~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s~ee~~nLREvksL~kln~hpniikL~Evi~d~~~~L~fV   88 (538)
T KOG0661|consen    9 MDRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNPHPNIIKLKEVIRDNDRILYFV   88 (538)
T ss_pred             HHHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhccHHHHHHHHHHHHHHhcCCCCcchhhHHHhhccCceEeee
Confidence            45677788999999999999999999999999999776444333 2388999999998 999999999998866699999


Q ss_pred             EeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecCC
Q 005257          441 YDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGH  520 (705)
Q Consensus       441 ~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~~  520 (705)
                      ||||+. +|.++++.+  +..+++.++..|+.||++||+|+|.   +|+.|||+||+|||+..+..+||+||||||....
T Consensus        89 fE~Md~-NLYqLmK~R--~r~fse~~irnim~QilqGL~hiHk---~GfFHRDlKPENiLi~~~~~iKiaDFGLARev~S  162 (538)
T KOG0661|consen   89 FEFMDC-NLYQLMKDR--NRLFSESDIRNIMYQILQGLAHIHK---HGFFHRDLKPENILISGNDVIKIADFGLAREVRS  162 (538)
T ss_pred             HHhhhh-hHHHHHhhc--CCcCCHHHHHHHHHHHHHHHHHHHh---cCcccccCChhheEecccceeEeccccccccccc
Confidence            999965 999999876  3489999999999999999999998   9999999999999999999999999999997754


Q ss_pred             CCcceeeeeeccccCCCccccc-cCCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhHHHHHhhhc
Q 005257          521 GQVASTTRVVGTVGYLAPEVFS-SGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRA  599 (705)
Q Consensus       521 ~~~~~~~~~~gt~~y~APE~~~-~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~l~~  599 (705)
                      .  ...+..+.|++|+|||++. .+-|+.+.||||+|||++|+.+-++.|.+..+  .|.++...      +.       
T Consensus       163 k--pPYTeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~sE--~Dqi~KIc------~V-------  225 (538)
T KOG0661|consen  163 K--PPYTEYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFPGASE--IDQIYKIC------EV-------  225 (538)
T ss_pred             C--CCcchhhhcccccchHHhhhccccCCchHHHHHHHHHHHHHHhcccCCCCcH--HHHHHHHH------HH-------
Confidence            3  3345678999999999975 46799999999999999999999988876542  22222211      11       


Q ss_pred             CCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHhccccCCCCCcchhhHHHHHHhhccccccccccccccCCCCC
Q 005257          600 KGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLEGKIEAGIENETEDMDAYLLQQVKSKDMWANYSRSFGYGYATH  679 (705)
Q Consensus       600 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~h  679 (705)
                      .+....+......+++..+--.-|..-|+-      |..++.    +    ........+..+..|+|..|.++.+|+.|
T Consensus       226 LGtP~~~~~~eg~~La~~mnf~~P~~~~~~------l~~L~p----~----~s~~~~~li~~ll~WDP~kRpTA~~al~~  291 (538)
T KOG0661|consen  226 LGTPDKDSWPEGYNLASAMNFRFPQVKPSP------LKDLLP----N----ASSEAASLIERLLAWDPDKRPTASQALQH  291 (538)
T ss_pred             hCCCccccchhHHHHHHHhccCCCcCCCCC------hHHhCc----c----cCHHHHHHHHHHhcCCCccCccHHHHhcC
Confidence            122222222223344444333334443331      111111    1    22233455566667999999999999999


Q ss_pred             CCcccccccccc
Q 005257          680 PTFHDIRQSNSY  691 (705)
Q Consensus       680 p~f~~~~~~~~~  691 (705)
                      |||...+.....
T Consensus       292 pffq~~~~~~~~  303 (538)
T KOG0661|consen  292 PFFQVGRASGSS  303 (538)
T ss_pred             cccccccccccc
Confidence            999888766544

>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]

Probab=100.00  E-value=1.9e-42  Score=353.69  Aligned_cols=243  Identities=28%  Similarity=0.375  Sum_probs=205.1

Q ss_pred             hCCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccC---CchhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEE
Q 005257          363 TKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHE---NDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLML  439 (705)
Q Consensus       363 t~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~---~~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~l  439 (705)
                      .+.|+..++||+|+||+||+++.+++++.+|+|++++.   .....+...+|..+|.+++||.||++.-.+.+ ...+||
T Consensus        24 ~~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ysFQt-~~kLyl  102 (357)
T KOG0598|consen   24 PDDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYSFQT-EEKLYL  102 (357)
T ss_pred             hhheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEeccc-CCeEEE
Confidence            46789999999999999999999999999999999765   33456778999999999999999999987776 789999


Q ss_pred             EEeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecC
Q 005257          440 VYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHG  519 (705)
Q Consensus       440 V~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~  519 (705)
                      |+||+.||.|..+|.+..   .+++..+.-++.+|+.||.|||+   .+||||||||+|||||++|+++|+||||++...
T Consensus       103 Vld~~~GGeLf~hL~~eg---~F~E~~arfYlaEi~lAL~~LH~---~gIiyRDlKPENILLd~~GHi~LtDFgL~k~~~  176 (357)
T KOG0598|consen  103 VLDYLNGGELFYHLQREG---RFSEDRARFYLAEIVLALGYLHS---KGIIYRDLKPENILLDEQGHIKLTDFGLCKEDL  176 (357)
T ss_pred             EEeccCCccHHHHHHhcC---CcchhHHHHHHHHHHHHHHHHHh---CCeeeccCCHHHeeecCCCcEEEeccccchhcc
Confidence            999999999999997543   69999999999999999999998   999999999999999999999999999998654


Q ss_pred             CCCcceeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhHHHHHhhhc
Q 005257          520 HGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRA  599 (705)
Q Consensus       520 ~~~~~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~l~~  599 (705)
                      .... .+...+||+.|||||++.+..|+..+|.||+|+++|||++|.+||...+.   ....+.+..+++          
T Consensus       177 ~~~~-~t~tfcGT~eYmAPEil~~~gy~~~vDWWsLGillYeML~G~pPF~~~~~---~~~~~~I~~~k~----------  242 (357)
T KOG0598|consen  177 KDGD-ATRTFCGTPEYMAPEILLGKGYDKAVDWWSLGILLYEMLTGKPPFYAEDV---KKMYDKILKGKL----------  242 (357)
T ss_pred             cCCC-ccccccCCccccChHHHhcCCCCcccchHhHHHHHHHHhhCCCCCcCccH---HHHHHHHhcCcC----------
Confidence            4332 33448999999999999999999999999999999999999999987542   222233333331          


Q ss_pred             CCCCCHHHHHHHHHHHHHcCCCCCCCCC
Q 005257          600 KGGFDEDEVERVLHLGLLCAYPDPRARP  627 (705)
Q Consensus       600 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RP  627 (705)
                       ..++.-......+++...++.||++|-
T Consensus       243 -~~~p~~ls~~ardll~~LL~rdp~~RL  269 (357)
T KOG0598|consen  243 -PLPPGYLSEEARDLLKKLLKRDPRQRL  269 (357)
T ss_pred             -CCCCccCCHHHHHHHHHHhccCHHHhc
Confidence             112222345567888888999999995

>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=100.00  E-value=5.8e-42  Score=356.08  Aligned_cols=257  Identities=28%  Similarity=0.433  Sum_probs=209.2

Q ss_pred             CCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCCchhHHHHHHHHHHhccCCCCCcceeeeeeeeccC-ceEEEEe
Q 005257          364 KGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKG-SLMLVYD  442 (705)
Q Consensus       364 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~-~~~lV~E  442 (705)
                      .++...+.||+|+||+||++....+|...|||.+...+....+.+.+|+.+|.+++|||||+++|......+ .+++.||
T Consensus        17 ~~~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~~~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~~~~~~i~mE   96 (313)
T KOG0198|consen   17 SNWSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELEDSPTSESLEREIRILSRLNHPNIVQYYGSSSSRENDEYNIFME   96 (313)
T ss_pred             chhhhhccccCccceEEEEEEecCCCcceeeeeeecccchhHHHHHHHHHHHHhCCCCCEEeeCCccccccCeeeEeeee
Confidence            345667899999999999999998899999999877654446778999999999999999999997444333 6899999


Q ss_pred             eCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEcc-CCCeeeeeeccceecCC-
Q 005257          443 YMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDK-EMNGRLGDFGLARMHGH-  520 (705)
Q Consensus       443 ~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~-~~~~kL~DFGla~~~~~-  520 (705)
                      |+++|+|.+++.+.+.  .|++..+..+.+||++||.|||+   ++||||||||+|||++. ++.+||+|||++..... 
T Consensus        97 y~~~GsL~~~~~~~g~--~l~E~~v~~ytr~iL~GL~ylHs---~g~vH~DiK~~NiLl~~~~~~~KlaDFG~a~~~~~~  171 (313)
T KOG0198|consen   97 YAPGGSLSDLIKRYGG--KLPEPLVRRYTRQILEGLAYLHS---KGIVHCDIKPANILLDPSNGDVKLADFGLAKKLESK  171 (313)
T ss_pred             ccCCCcHHHHHHHcCC--CCCHHHHHHHHHHHHHHHHHHHh---CCEeccCcccceEEEeCCCCeEEeccCccccccccc
Confidence            9999999999987654  69999999999999999999998   99999999999999999 79999999999987653 


Q ss_pred             -CCcceeeeeeccccCCCccccccC-CCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhHHHHHhhh
Q 005257          521 -GQVASTTRVVGTVGYLAPEVFSSG-RASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDARLR  598 (705)
Q Consensus       521 -~~~~~~~~~~gt~~y~APE~~~~~-~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~l~  598 (705)
                       ..........||+.|||||++..+ ....++||||+||++.||+||+.||... ....+++.........         
T Consensus       172 ~~~~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~-~~~~~~~~~ig~~~~~---------  241 (313)
T KOG0198|consen  172 GTKSDSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSEF-FEEAEALLLIGREDSL---------  241 (313)
T ss_pred             cccccccccccCCccccCchhhcCCCcCCccchhhhcCCEEEeccCCCCcchhh-cchHHHHHHHhccCCC---------
Confidence             222234457899999999999854 3446999999999999999999999763 1111222121111111         


Q ss_pred             cCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHH
Q 005257          599 AKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLE  637 (705)
Q Consensus       599 ~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  637 (705)
                        +.++........+++..|++.||++|||+.+++++.-
T Consensus       242 --P~ip~~ls~~a~~Fl~~C~~~~p~~Rpta~eLL~hpf  278 (313)
T KOG0198|consen  242 --PEIPDSLSDEAKDFLRKCFKRDPEKRPTAEELLEHPF  278 (313)
T ss_pred             --CCCCcccCHHHHHHHHHHhhcCcccCcCHHHHhhChh
Confidence              2344455667889999999999999999999998653

>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]

Probab=100.00  E-value=3.1e-42  Score=363.70  Aligned_cols=243  Identities=26%  Similarity=0.489  Sum_probs=204.6

Q ss_pred             cceEEeecCceEEEEEEEcCCCeEEEEEEeccCCchhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEEEEeeCCCC
Q 005257          368 EENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENG  447 (705)
Q Consensus       368 ~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~lV~E~~~~g  447 (705)
                      +.+-||.|+.|.||+|++.  ++.||||+++...       ..+|+.|++|+||||+.+.|+|.. ...+|||||||+.|
T Consensus       128 ELeWlGSGaQGAVF~Grl~--netVAVKKV~elk-------ETdIKHLRkLkH~NII~FkGVCtq-sPcyCIiMEfCa~G  197 (904)
T KOG4721|consen  128 ELEWLGSGAQGAVFLGRLH--NETVAVKKVRELK-------ETDIKHLRKLKHPNIITFKGVCTQ-SPCYCIIMEFCAQG  197 (904)
T ss_pred             hhhhhccCcccceeeeecc--CceehhHHHhhhh-------hhhHHHHHhccCcceeeEeeeecC-CceeEEeeeccccc
Confidence            4678999999999999997  6889999885332       357899999999999999999987 67899999999999


Q ss_pred             ChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecCCCCcceee
Q 005257          448 SLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTT  527 (705)
Q Consensus       448 sL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~~~~~~~~~  527 (705)
                      -|..+|+...   .++......+.++||.||.|||.   +.|||||||.-||||..+..+||+|||-++....-  ....
T Consensus       198 qL~~VLka~~---~itp~llv~Wsk~IA~GM~YLH~---hKIIHRDLKSPNiLIs~~d~VKIsDFGTS~e~~~~--STkM  269 (904)
T KOG4721|consen  198 QLYEVLKAGR---PITPSLLVDWSKGIAGGMNYLHL---HKIIHRDLKSPNILISYDDVVKISDFGTSKELSDK--STKM  269 (904)
T ss_pred             cHHHHHhccC---ccCHHHHHHHHHHhhhhhHHHHH---hhHhhhccCCCceEeeccceEEeccccchHhhhhh--hhhh
Confidence            9999997533   78999999999999999999998   99999999999999999999999999999876543  2334


Q ss_pred             eeeccccCCCccccccCCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhHHHHHhhhcCCCCCHHH
Q 005257          528 RVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRAKGGFDEDE  607 (705)
Q Consensus       528 ~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~l~~~~~~~~~~  607 (705)
                      .++||..|||||++.+.+.++|+||||||||||||+||..||.+-+..  ..+|.   -|.      ..+.  ...+..+
T Consensus       270 SFaGTVaWMAPEvIrnePcsEKVDIwSfGVVLWEmLT~EiPYkdVdss--AIIwG---VGs------NsL~--LpvPstc  336 (904)
T KOG4721|consen  270 SFAGTVAWMAPEVIRNEPCSEKVDIWSFGVVLWEMLTGEIPYKDVDSS--AIIWG---VGS------NSLH--LPVPSTC  336 (904)
T ss_pred             hhhhhHhhhCHHHhhcCCcccccceehhHHHHHHHHhcCCCccccchh--eeEEe---ccC------Cccc--ccCcccC
Confidence            589999999999999999999999999999999999999999763321  11111   010      0111  2345677


Q ss_pred             HHHHHHHHHHcCCCCCCCCCCHHHHHHHHHhccc
Q 005257          608 VERVLHLGLLCAYPDPRARPTMRQVVKVLEGKIE  641 (705)
Q Consensus       608 ~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~  641 (705)
                      ++.+.-|+++||+..|..||++++++.+|+-..+
T Consensus       337 P~GfklL~Kqcw~sKpRNRPSFrqil~HldIa~p  370 (904)
T KOG4721|consen  337 PDGFKLLLKQCWNSKPRNRPSFRQILLHLDIASP  370 (904)
T ss_pred             chHHHHHHHHHHhcCCCCCccHHHHHHHHhhcCH
Confidence            8889999999999999999999999999984433

>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3

Probab=100.00  E-value=5.7e-41  Score=361.48  Aligned_cols=264  Identities=26%  Similarity=0.414  Sum_probs=209.2

Q ss_pred             HhCCCCcceEEeecCceEEEEEEEc-----CCCeEEEEEEeccCC-chhHHHHHHHHHHhccC-CCCCcceeeeeeeecc
Q 005257          362 ATKGFSEENVIGVGGNGKVYKGVLE-----GGGAEIAVKRISHEN-DGGTRAFLAEISSLGRL-KHKSLVGLRGWCKREK  434 (705)
Q Consensus       362 at~~f~~~~~LG~G~fg~Vy~~~~~-----~~~~~vavK~i~~~~-~~~~~~~~~Ei~~l~~l-~Hpniv~l~g~~~~~~  434 (705)
                      ..++|...++||+|+||.||+|.+.     .++..||||+++... ....+.+.+|+.++..+ +||||++++++|...+
T Consensus         5 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~   84 (338)
T cd05102           5 PRDRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGATASEHKALMSELKILIHIGNHLNVVNLLGACTKPN   84 (338)
T ss_pred             chhHceeeeEeccCCcceEEEEEEeccCCcccchhhheeccccccchHHHHHHHHHHHHHHHhccCcceeeEEeEecCCC
Confidence            3467888999999999999999852     334679999987543 23456789999999999 8999999999988766


Q ss_pred             CceEEEEeeCCCCChhHHHHhcCC--------------------------------------------------------
Q 005257          435 GSLMLVYDYMENGSLDKWIFQCDG--------------------------------------------------------  458 (705)
Q Consensus       435 ~~~~lV~E~~~~gsL~~~L~~~~~--------------------------------------------------------  458 (705)
                      +.+++||||+++|+|.+++.....                                                        
T Consensus        85 ~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  164 (338)
T cd05102          85 GPLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPPQETD  164 (338)
T ss_pred             CceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCcccccchhcc
Confidence            678999999999999999975321                                                        


Q ss_pred             ---CCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecCCCCcc-eeeeeecccc
Q 005257          459 ---SMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVA-STTRVVGTVG  534 (705)
Q Consensus       459 ---~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~~~~~~-~~~~~~gt~~  534 (705)
                         ...+++.++..++.|++.||.|||+   ++|+||||||+|||++.++.+||+|||+++........ ......++..
T Consensus       165 ~~~~~~l~~~~~~~~~~qi~~aL~~LH~---~~ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~  241 (338)
T cd05102         165 DLWKSPLTMEDLICYSFQVARGMEFLAS---RKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGSARLPLK  241 (338)
T ss_pred             ccccCCCCHHHHHHHHHHHHHHHHHHHH---CCEECCCCccceEEEcCCCcEEEeecccccccccCcchhcccCCCCCcc
Confidence               1247888999999999999999998   99999999999999999999999999999865332211 1122345678


Q ss_pred             CCCccccccCCCCccccEEEEehhHHHHhh-CCCCCCCCCccHHHHHHHHHHhCchhHHHHHhhhcCCCCCHHHHHHHHH
Q 005257          535 YLAPEVFSSGRASTQTDVFGFGILILEVLS-GRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRAKGGFDEDEVERVLH  613 (705)
Q Consensus       535 y~APE~~~~~~~s~ksDVwS~Gvvl~Ellt-G~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~l~~~~~~~~~~~~~l~~  613 (705)
                      |+|||++.+..++.++|||||||++|||++ |..||......  +.....+..+..           ...+......+.+
T Consensus       242 y~aPE~~~~~~~~~~sDiwslG~il~el~~~g~~pf~~~~~~--~~~~~~~~~~~~-----------~~~~~~~~~~l~~  308 (338)
T cd05102         242 WMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIN--EEFCQRLKDGTR-----------MRAPENATPEIYR  308 (338)
T ss_pred             ccCcHHhhcCCCCcccCHHHHHHHHHHHHhCCCCCCCCCCcc--HHHHHHHhcCCC-----------CCCCCCCCHHHHH
Confidence            999999998899999999999999999997 99999764321  112222222211           1112233456889


Q ss_pred             HHHHcCCCCCCCCCCHHHHHHHHHhccc
Q 005257          614 LGLLCAYPDPRARPTMRQVVKVLEGKIE  641 (705)
Q Consensus       614 l~~~Cl~~dP~~RPs~~evl~~L~~~~~  641 (705)
                      ++..||+.||++|||+.++++.|+..++
T Consensus       309 li~~cl~~dp~~RPs~~el~~~l~~~~~  336 (338)
T cd05102         309 IMLACWQGDPKERPTFSALVEILGDLLQ  336 (338)
T ss_pred             HHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence            9999999999999999999999987654

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V

>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]

Probab=100.00  E-value=2.1e-40  Score=351.57  Aligned_cols=264  Identities=26%  Similarity=0.414  Sum_probs=212.8

Q ss_pred             HhCCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCC-chhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEEE
Q 005257          362 ATKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHEN-DGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLV  440 (705)
Q Consensus       362 at~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~-~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~lV  440 (705)
                      +.+.....++||+|-||.|.++.... +..||||.++... ....++|.+|+++|.+|+||||+.++|+|.. ++.+++|
T Consensus       536 PRs~L~~~ekiGeGqFGEVhLCeveg-~lkVAVK~Lr~~a~~~~r~~F~kEIkiLsqLkhPNIveLvGVC~~-DePicmI  613 (807)
T KOG1094|consen  536 PRSRLRFKEKIGEGQFGEVHLCEVEG-PLKVAVKILRPDATKNARNDFLKEIKILSRLKHPNIVELLGVCVQ-DDPLCMI  613 (807)
T ss_pred             chhheehhhhhcCcccceeEEEEecC-ceEEEEeecCcccchhHHHHHHHHHHHHhccCCCCeeEEEeeeec-CCchHHH
Confidence            33456677899999999999999874 6899999998763 4556899999999999999999999999997 6789999


Q ss_pred             EeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecCC
Q 005257          441 YDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGH  520 (705)
Q Consensus       441 ~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~~  520 (705)
                      +|||++|+|.++|...... .+......+|+.|||.||+||.+   .++|||||.++|||+|.++++||+|||++|..-.
T Consensus       614 ~EYmEnGDLnqFl~aheap-t~~t~~~vsi~tqiasgmaYLes---~nfVHrd~a~rNcLv~~e~~iKiadfgmsR~lys  689 (807)
T KOG1094|consen  614 TEYMENGDLNQFLSAHELP-TAETAPGVSICTQIASGMAYLES---LNFVHRDLATRNCLVDGEFTIKIADFGMSRNLYS  689 (807)
T ss_pred             HHHHhcCcHHHHHHhccCc-ccccchhHHHHHHHHHHHHHHHh---hchhhccccccceeecCcccEEecCccccccccc
Confidence            9999999999999876433 24566778899999999999999   9999999999999999999999999999995544


Q ss_pred             CCc-ceeeeeeccccCCCccccccCCCCccccEEEEehhHHHHh--hCCCCCCCCCcc-HHHHHHHHHHhCchhHHHHHh
Q 005257          521 GQV-ASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVL--SGRRPIEEGKPN-LVEMVWELMVQGKLLDALDAR  596 (705)
Q Consensus       521 ~~~-~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~Ell--tG~~Pf~~~~~~-~~~~v~~~~~~~~~~~~id~~  596 (705)
                      +.. ....+.+-+.+|||||.+..+++++++|||+||+.+||++  |...||...... .++........+. ...    
T Consensus       690 g~yy~vqgr~vlpiRwmawEsillgkFttaSDvWafgvTlwE~~~~C~e~Py~~lt~e~vven~~~~~~~~~-~~~----  764 (807)
T KOG1094|consen  690 GDYYRVQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEVFMLCREQPYSQLTDEQVVENAGEFFRDQG-RQV----  764 (807)
T ss_pred             CCceeeecceeeeeeehhHHHHHhccccchhhhhhhHHHHHHHHHHHhhCchhhhhHHHHHHhhhhhcCCCC-cce----
Confidence            433 3333456688999999999999999999999999999974  588999764321 1111111111111 111    


Q ss_pred             hhcCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHhc
Q 005257          597 LRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLEGK  639 (705)
Q Consensus       597 l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~  639 (705)
                         ....+.-++..++++++.||..|-++||+++++...|++.
T Consensus       765 ---~l~~P~~cp~~lyelml~Cw~~es~~RPsFe~lh~~lq~~  804 (807)
T KOG1094|consen  765 ---VLSRPPACPQGLYELMLRCWRRESEQRPSFEQLHLFLQED  804 (807)
T ss_pred             ---eccCCCcCcHHHHHHHHHHhchhhhcCCCHHHHHHHHHHh
Confidence               1223445667889999999999999999999999999854

>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]

Probab=100.00  E-value=7.4e-42  Score=365.87  Aligned_cols=265  Identities=27%  Similarity=0.447  Sum_probs=211.9

Q ss_pred             HHHHHHhCCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccC--CchhHHHHHHHHHHhccCCCCCcceeeeeeeecc
Q 005257          357 QEIEAATKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHE--NDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREK  434 (705)
Q Consensus       357 ~el~~at~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~--~~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~  434 (705)
                      ++.++..+.+...+.||+|.||+||+|.+.+   .||||++...  ..+..+.|++|+.++++-||.||+-+.|||..  
T Consensus       385 ~~WeIp~~ev~l~~rIGsGsFGtV~Rg~whG---dVAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH~NIlLFMG~~~~--  459 (678)
T KOG0193|consen  385 EEWEIPPEEVLLGERIGSGSFGTVYRGRWHG---DVAVKLLNVDDPTPEQLQAFKNEVAVLKKTRHENILLFMGACMN--  459 (678)
T ss_pred             cccccCHHHhhccceeccccccceeeccccc---ceEEEEEecCCCCHHHHHHHHHHHHHHhhcchhhheeeehhhcC--
Confidence            4455555556678899999999999999975   3999999876  45678899999999999999999999999985  


Q ss_pred             CceEEEEeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeecc
Q 005257          435 GSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGL  514 (705)
Q Consensus       435 ~~~~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGl  514 (705)
                      ..+.||+.+|+|.+|+.+|+..+.  .|...+.+.|+.|||+|+.|||.   ++|||||||..||+|.+++.+||+||||
T Consensus       460 p~~AIiTqwCeGsSLY~hlHv~et--kfdm~~~idIAqQiaqGM~YLHA---K~IIHrDLKSnNIFl~~~~kVkIgDFGL  534 (678)
T KOG0193|consen  460 PPLAIITQWCEGSSLYTHLHVQET--KFDMNTTIDIAQQIAQGMDYLHA---KNIIHRDLKSNNIFLHEDLKVKIGDFGL  534 (678)
T ss_pred             CceeeeehhccCchhhhhccchhh--hhhHHHHHHHHHHHHHhhhhhhh---hhhhhhhccccceEEccCCcEEEecccc
Confidence            345999999999999999987553  69999999999999999999998   9999999999999999999999999999


Q ss_pred             ceecCCC-CcceeeeeeccccCCCcccccc---CCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchh
Q 005257          515 ARMHGHG-QVASTTRVVGTVGYLAPEVFSS---GRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLL  590 (705)
Q Consensus       515 a~~~~~~-~~~~~~~~~gt~~y~APE~~~~---~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~  590 (705)
                      +..-..- ........-|...|||||+++.   .+|+..+||||||||+|||+||..||.....   +.+.-.+.+|.+.
T Consensus       535 atvk~~w~g~~q~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPysi~~~---dqIifmVGrG~l~  611 (678)
T KOG0193|consen  535 ATVKTRWSGEQQLEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYSIQNR---DQIIFMVGRGYLM  611 (678)
T ss_pred             eeeeeeeccccccCCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcCCCCh---hheEEEecccccC
Confidence            8543211 1111122346788999999965   4689999999999999999999999984322   2221222333211


Q ss_pred             HHHHHhhhcCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHhccc
Q 005257          591 DALDARLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLEGKIE  641 (705)
Q Consensus       591 ~~id~~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~  641 (705)
                      .    ++   ......+.+.+.+|+..||..++++||.+.+|+..|+.+..
T Consensus       612 p----d~---s~~~s~~pk~mk~Ll~~C~~~~~~eRP~F~~il~~l~~l~~  655 (678)
T KOG0193|consen  612 P----DL---SKIRSNCPKAMKRLLSDCWKFDREERPLFPQLLSKLEELLP  655 (678)
T ss_pred             c----cc---hhhhccCHHHHHHHHHHHHhcCcccCccHHHHHHHHHHhhh
Confidence            1    11   11234566788999999999999999999999998886665

>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=5e-41  Score=358.79  Aligned_cols=251  Identities=24%  Similarity=0.411  Sum_probs=215.2

Q ss_pred             CCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCCchhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEEEEee
Q 005257          364 KGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDY  443 (705)
Q Consensus       364 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~lV~E~  443 (705)
                      ..|....+||+|+.|.||.+....+++.||||++........+-+++|+.+|+..+|+|||.++.-+.. ++.+|.||||
T Consensus       273 ~~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~~keLilnEi~Vm~~~~H~NiVnfl~Sylv-~deLWVVMEy  351 (550)
T KOG0578|consen  273 SKYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRKQPKKELLLNEILVMRDLHHPNIVNFLDSYLV-GDELWVVMEY  351 (550)
T ss_pred             hhhcchhhhccccccceeeeeeccCCceEEEEEEEeccCCchhhhHHHHHHHHhccchHHHHHHHHhcc-cceeEEEEee
Confidence            357778889999999999999999999999999987766666778999999999999999999998876 5789999999


Q ss_pred             CCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecCCCCc
Q 005257          444 MENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQV  523 (705)
Q Consensus       444 ~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~~~~~  523 (705)
                      |++|+|.+.+...    .+++.++..|++++++||+|||.   ++|+|||||.+|||++.+|++||+|||+|..+.....
T Consensus       352 m~ggsLTDvVt~~----~~~E~qIA~Icre~l~aL~fLH~---~gIiHrDIKSDnILL~~~g~vKltDFGFcaqi~~~~~  424 (550)
T KOG0578|consen  352 MEGGSLTDVVTKT----RMTEGQIAAICREILQGLKFLHA---RGIIHRDIKSDNILLTMDGSVKLTDFGFCAQISEEQS  424 (550)
T ss_pred             cCCCchhhhhhcc----cccHHHHHHHHHHHHHHHHHHHh---cceeeeccccceeEeccCCcEEEeeeeeeeccccccC
Confidence            9999999998643    58999999999999999999998   9999999999999999999999999999988876654


Q ss_pred             ceeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhHHHHHhhhcCCCC
Q 005257          524 ASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRAKGGF  603 (705)
Q Consensus       524 ~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~l~~~~~~  603 (705)
                      . ....+||+.|||||++....|.+|.||||||++++||+-|.+||-...+  ...++-....|..      .    ...
T Consensus       425 K-R~TmVGTPYWMAPEVvtrk~YG~KVDIWSLGIMaIEMveGEPPYlnE~P--lrAlyLIa~ng~P------~----lk~  491 (550)
T KOG0578|consen  425 K-RSTMVGTPYWMAPEVVTRKPYGPKVDIWSLGIMAIEMVEGEPPYLNENP--LRALYLIATNGTP------K----LKN  491 (550)
T ss_pred             c-cccccCCCCccchhhhhhcccCccccchhhhhHHHHHhcCCCCccCCCh--HHHHHHHhhcCCC------C----cCC
Confidence            3 3447999999999999999999999999999999999999999987543  2222222223321      1    122


Q ss_pred             CHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 005257          604 DEDEVERVLHLGLLCAYPDPRARPTMRQVVKV  635 (705)
Q Consensus       604 ~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  635 (705)
                      +......+.++..+||+.|+++||++.|++++
T Consensus       492 ~~klS~~~kdFL~~cL~~dv~~RasA~eLL~H  523 (550)
T KOG0578|consen  492 PEKLSPELKDFLDRCLVVDVEQRASAKELLEH  523 (550)
T ss_pred             ccccCHHHHHHHHHHhhcchhcCCCHHHHhcC
Confidence            33445678899999999999999999999984

>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]

Probab=100.00  E-value=3e-41  Score=338.07  Aligned_cols=299  Identities=23%  Similarity=0.258  Sum_probs=223.5

Q ss_pred             CCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCCc--hhHHHHHHHHHHhccCCCCCcceeeeeeee-ccCceEEE
Q 005257          364 KGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHEND--GGTRAFLAEISSLGRLKHKSLVGLRGWCKR-EKGSLMLV  440 (705)
Q Consensus       364 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~--~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~-~~~~~~lV  440 (705)
                      ++|+..+.|++|.||.||+|+++.+++.||+|+++.+..  .-.-.-++||.+|.+.+|||||.+..+..- .-+.+|+|
T Consensus        76 ~efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~GFPItsLREIniLl~~~H~NIV~vkEVVvG~~~d~iy~V  155 (419)
T KOG0663|consen   76 EEFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINILLKARHPNIVEVKEVVVGSNMDKIYIV  155 (419)
T ss_pred             HHHHHHhhcccCcceeEEEeccCCcceeEEeeecccccccCCCcchhHHHHHHHHhcCCCCeeeeEEEEeccccceeeee
Confidence            346778899999999999999999999999999987642  223346899999999999999999887652 23568999


Q ss_pred             EeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecCC
Q 005257          441 YDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGH  520 (705)
Q Consensus       441 ~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~~  520 (705)
                      ||||+. +|..++...+  +++...+...++.|+++|++|||.   .-|+|||||++|+|+...|.+||+||||||.++.
T Consensus       156 Me~~Eh-DLksl~d~m~--q~F~~~evK~L~~QlL~glk~lH~---~wilHRDLK~SNLLm~~~G~lKiaDFGLAR~ygs  229 (419)
T KOG0663|consen  156 MEYVEH-DLKSLMETMK--QPFLPGEVKTLMLQLLRGLKHLHD---NWILHRDLKTSNLLLSHKGILKIADFGLAREYGS  229 (419)
T ss_pred             HHHHHh-hHHHHHHhcc--CCCchHHHHHHHHHHHHHHHHHhh---ceeEecccchhheeeccCCcEEecccchhhhhcC
Confidence            999987 9999998765  379999999999999999999998   9999999999999999999999999999999987


Q ss_pred             CCcceeeeeeccccCCCccccccC-CCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhHHHHHhhhc
Q 005257          521 GQVASTTRVVGTVGYLAPEVFSSG-RASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRA  599 (705)
Q Consensus       521 ~~~~~~~~~~gt~~y~APE~~~~~-~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~l~~  599 (705)
                      .... .+..+-|.+|+|||.+.+. .|++..|+||+|||+.||+++++.|.+..+               .++++..++.
T Consensus       230 p~k~-~T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~G~sE---------------~dQl~~If~l  293 (419)
T KOG0663|consen  230 PLKP-YTPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFPGKSE---------------IDQLDKIFKL  293 (419)
T ss_pred             Cccc-CcceEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHhcCCCCCCCch---------------HHHHHHHHHH
Confidence            6443 4556779999999999874 699999999999999999999998887553               2333333333


Q ss_pred             CCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHhccccCCCCCcchhhHHHHHHhhccccccccccccccCCCCC
Q 005257          600 KGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLEGKIEAGIENETEDMDAYLLQQVKSKDMWANYSRSFGYGYATH  679 (705)
Q Consensus       600 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~h  679 (705)
                      .+......+..+..+-.+    +-..+|.-  -...|++.++...      ..+.-.+++.....++|..|.++.++|.|
T Consensus       294 lGtPte~iwpg~~~lp~~----k~~~f~~~--pyn~lr~kF~~~~------lse~g~~Lln~llt~dP~kR~tA~~~L~h  361 (419)
T KOG0663|consen  294 LGTPSEAIWPGYSELPAV----KKMTFSEH--PYNNLRKKFGALS------LSEQGFDLLNKLLTYDPGKRITAEDGLKH  361 (419)
T ss_pred             hCCCccccCCCccccchh----hccccCCC--Cchhhhhhccccc------cchhHHHHHHHHhccCccccccHHHhhcc
Confidence            233333322222221110    00011110  0122333332111      12333455666777999999999999999


Q ss_pred             CCcccccccccccccce
Q 005257          680 PTFHDIRQSNSYSMSLS  696 (705)
Q Consensus       680 p~f~~~~~~~~~~~~~~  696 (705)
                      +||.+.......++=-+
T Consensus       362 ~~F~e~P~p~~P~~~Pt  378 (419)
T KOG0663|consen  362 EYFRETPLPIDPSMFPT  378 (419)
T ss_pred             cccccCCCCCChhhcCC
Confidence            99999777666554433

>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=100.00  E-value=7.2e-41  Score=385.78  Aligned_cols=261  Identities=28%  Similarity=0.446  Sum_probs=214.7

Q ss_pred             hCCCCcceEEeecCceEEEEEEEcCCC-----eEEEEEEeccC-CchhHHHHHHHHHHhccCCCCCcceeeeeeeeccCc
Q 005257          363 TKGFSEENVIGVGGNGKVYKGVLEGGG-----AEIAVKRISHE-NDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGS  436 (705)
Q Consensus       363 t~~f~~~~~LG~G~fg~Vy~~~~~~~~-----~~vavK~i~~~-~~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~  436 (705)
                      .++....+.||+|.||.||.|...+..     ..||||.+++. +.+...+|++|..+|++++|||||+++|+|.+ ...
T Consensus       691 ~~~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~-~~~  769 (1025)
T KOG1095|consen  691 RKNVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSSEQEVSDFLKEALLMSKFDHPNIVSLIGVCLD-SGP  769 (1025)
T ss_pred             hhheEeeeeeccccccceEEEEEecCCCCccceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCcceeeEEEeecC-CCC
Confidence            345566788999999999999986432     45999999876 45567899999999999999999999999998 778


Q ss_pred             eEEEEeeCCCCChhHHHHhcCC----CCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeee
Q 005257          437 LMLVYDYMENGSLDKWIFQCDG----SMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDF  512 (705)
Q Consensus       437 ~~lV~E~~~~gsL~~~L~~~~~----~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DF  512 (705)
                      .+|++|||++|+|..+|++...    ...|+..+++.++.|||+|+.||++   +++|||||.++|+||+....+||+||
T Consensus       770 ~~i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~---~~fvHRDLAaRNCLL~~~r~VKIaDF  846 (1025)
T KOG1095|consen  770 PLILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLES---KHFVHRDLAARNCLLDERRVVKIADF  846 (1025)
T ss_pred             cEEEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHh---CCCcCcchhhhheeecccCcEEEccc
Confidence            8999999999999999987521    2369999999999999999999998   99999999999999999999999999


Q ss_pred             ccceecCC-CCcceeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhh-CCCCCCCCCccHHHHHHHHHHhCchh
Q 005257          513 GLARMHGH-GQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLS-GRRPIEEGKPNLVEMVWELMVQGKLL  590 (705)
Q Consensus       513 Gla~~~~~-~~~~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~Ellt-G~~Pf~~~~~~~~~~v~~~~~~~~~~  590 (705)
                      ||||.+.. +.........-...|||||.+..+.++.|+|||||||+|||++| |..||...+..   .+...+.+|.  
T Consensus       847 GlArDiy~~~yyr~~~~a~lPvkWm~PEsl~d~iFtskSDvWsFGVllWEifslG~~PY~~~~n~---~v~~~~~~gg--  921 (1025)
T KOG1095|consen  847 GLARDIYDKDYYRKHGEAMLPVKWMPPESLKDGIFTSKSDVWSFGVLLWEIFSLGATPYPSRSNF---EVLLDVLEGG--  921 (1025)
T ss_pred             chhHhhhhchheeccCccccceecCCHHHHhhcccccccchhhhHHHHHHHHhCCCCCCCCcchH---HHHHHHHhCC--
Confidence            99994333 22222222233568999999999999999999999999999999 99999875541   2223222222  


Q ss_pred             HHHHHhhhcCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHhccc
Q 005257          591 DALDARLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLEGKIE  641 (705)
Q Consensus       591 ~~id~~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~  641 (705)
                           |    -+.+..+++.+.+++..||+.+|++||++..+++.+.....
T Consensus       922 -----R----L~~P~~CP~~ly~lM~~CW~~~pe~RP~F~~i~~q~~~i~~  963 (1025)
T KOG1095|consen  922 -----R----LDPPSYCPEKLYQLMLQCWKHDPEDRPSFRTIVEQDPAISN  963 (1025)
T ss_pred             -----c----cCCCCCCChHHHHHHHHHccCChhhCccHHHHHhhhhhhhh
Confidence                 1    23455677889999999999999999999999998776554

>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional

Probab=100.00  E-value=2.1e-39  Score=396.14  Aligned_cols=261  Identities=27%  Similarity=0.480  Sum_probs=214.4

Q ss_pred             CCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCCchhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEEEEee
Q 005257          364 KGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDY  443 (705)
Q Consensus       364 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~lV~E~  443 (705)
                      ..|...+.||+|+||.||+|....++..||||++......    ..+|++++++++||||++++++|.. ....++||||
T Consensus       690 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~----~~~~~~~l~~l~HpnIv~~~~~~~~-~~~~~lv~Ey  764 (968)
T PLN00113        690 SSLKEENVISRGKKGASYKGKSIKNGMQFVVKEINDVNSI----PSSEIADMGKLQHPNIVKLIGLCRS-EKGAYLIHEY  764 (968)
T ss_pred             hhCCcccEEccCCCeeEEEEEECCCCcEEEEEEccCCccc----cHHHHHHHhhCCCCCcceEEEEEEc-CCCCEEEEeC
Confidence            4577889999999999999999888999999998644321    2346889999999999999999986 5678999999


Q ss_pred             CCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecCCCCc
Q 005257          444 MENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQV  523 (705)
Q Consensus       444 ~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~~~~~  523 (705)
                      +++|+|.++++      .++|.++.+++.|+|+||+|||..+.++|+||||||+||+++.++.+++. ||.+......  
T Consensus       765 ~~~g~L~~~l~------~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlkp~Nil~~~~~~~~~~-~~~~~~~~~~--  835 (968)
T PLN00113        765 IEGKNLSEVLR------NLSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIIIDGKDEPHLR-LSLPGLLCTD--  835 (968)
T ss_pred             CCCCcHHHHHh------cCCHHHHHHHHHHHHHHHHHhccCCCCCeecCCCCHHhEEECCCCceEEE-eccccccccC--
Confidence            99999999995      38999999999999999999997666899999999999999999888875 6665433221  


Q ss_pred             ceeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhhCCCCCCCC---CccHHHHHHHHHHhCchhHHHHHhhhcC
Q 005257          524 ASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEG---KPNLVEMVWELMVQGKLLDALDARLRAK  600 (705)
Q Consensus       524 ~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~---~~~~~~~v~~~~~~~~~~~~id~~l~~~  600 (705)
                         ....||+.|||||++.+..++.++|||||||++|||++|+.||...   .....+|+............+|+.+...
T Consensus       836 ---~~~~~t~~y~aPE~~~~~~~~~~sDv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  912 (968)
T PLN00113        836 ---TKCFISSAYVAPETRETKDITEKSDIYGFGLILIELLTGKSPADAEFGVHGSIVEWARYCYSDCHLDMWIDPSIRGD  912 (968)
T ss_pred             ---CCccccccccCcccccCCCCCcccchhhHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHhcCccchhheeCccccCC
Confidence               1236789999999999999999999999999999999999998642   2345566554444444444455555433


Q ss_pred             CCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHhccc
Q 005257          601 GGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLEGKIE  641 (705)
Q Consensus       601 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~  641 (705)
                      ...+.++...+.+++.+||+.||++||+|.|+++.|+...+
T Consensus       913 ~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~evl~~L~~~~~  953 (968)
T PLN00113        913 VSVNQNEIVEVMNLALHCTATDPTARPCANDVLKTLESASR  953 (968)
T ss_pred             CCccHHHHHHHHHHHHhhCcCCchhCcCHHHHHHHHHHhhc
Confidence            44566778889999999999999999999999999997765

>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=5.4e-40  Score=340.46  Aligned_cols=263  Identities=25%  Similarity=0.370  Sum_probs=209.3

Q ss_pred             hCCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCCc-hhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEEEE
Q 005257          363 TKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHEND-GGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVY  441 (705)
Q Consensus       363 t~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~-~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~lV~  441 (705)
                      .+.|...+.||.|..++||+|+....++.||||++..+.- ...+.+.+|+..|+.++||||++.+..|.. +..+|+||
T Consensus        25 ~~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~~ld~l~kE~~~msl~~HPNIv~~~~sFvv-~~~LWvVm  103 (516)
T KOG0582|consen   25 AKDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNNDLDALRKEVQTMSLIDHPNIVTYHCSFVV-DSELWVVM  103 (516)
T ss_pred             ccceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhhhhHHHHHHHHHHhhhcCCCCcceEEEEEEe-cceeEEee
Confidence            4578889999999999999999999999999999987643 336889999999999999999999998776 77999999


Q ss_pred             eeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecCCC
Q 005257          442 DYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHG  521 (705)
Q Consensus       442 E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~~~  521 (705)
                      .||.+||+.+.++..-.. .+.+..+..|++++++||.|||.   +|.||||||+.||||+++|.+||+|||.+..+...
T Consensus       104 pfMa~GS~ldIik~~~~~-Gl~E~~Ia~iLre~LkaL~YLH~---~G~IHRdvKAgnILi~~dG~VkLadFgvsa~l~~~  179 (516)
T KOG0582|consen  104 PFMAGGSLLDIIKTYYPD-GLEEASIATILREVLKALDYLHQ---NGHIHRDVKAGNILIDSDGTVKLADFGVSASLFDS  179 (516)
T ss_pred             hhhcCCcHHHHHHHHccc-cccHHHHHHHHHHHHHHHHHHHh---cCceecccccccEEEcCCCcEEEcCceeeeeeccc
Confidence            999999999999764333 59999999999999999999998   99999999999999999999999999987544332


Q ss_pred             Cccee---eeeeccccCCCcccccc--CCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhHHHHHh
Q 005257          522 QVAST---TRVVGTVGYLAPEVFSS--GRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDAR  596 (705)
Q Consensus       522 ~~~~~---~~~~gt~~y~APE~~~~--~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~  596 (705)
                      .....   ...+||+.|||||++..  ..|+.|+||||||+..+||++|..||....+  .+.....+ ++......-..
T Consensus       180 G~R~~~rf~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~pP--mkvLl~tL-qn~pp~~~t~~  256 (516)
T KOG0582|consen  180 GDRQVTRFNTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPFSKYPP--MKVLLLTL-QNDPPTLLTSG  256 (516)
T ss_pred             CceeeEeeccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCcccCCh--HHHHHHHh-cCCCCCccccc
Confidence            22221   44689999999999643  4699999999999999999999999986543  12222222 22211110000


Q ss_pred             hhcCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 005257          597 LRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKV  635 (705)
Q Consensus       597 l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  635 (705)
                      +.  .+-.......+.+++..|++.||++|||+.++++.
T Consensus       257 ~~--~d~~k~~~ksf~e~i~~CL~kDP~kRptAskLlkh  293 (516)
T KOG0582|consen  257 LD--KDEDKKFSKSFREMIALCLVKDPSKRPTASKLLKH  293 (516)
T ss_pred             CC--hHHhhhhcHHHHHHHHHHhhcCcccCCCHHHHhcc
Confidence            00  00011223478899999999999999999999873

>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=1.1e-40  Score=339.48  Aligned_cols=287  Identities=22%  Similarity=0.341  Sum_probs=221.0

Q ss_pred             HHhCCCCcceEEeecCceEEEEEEEcCCCeEEEEEEecc--CCchhHHHHHHHHHHhccCCCCCcceeeeeeee----cc
Q 005257          361 AATKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISH--ENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKR----EK  434 (705)
Q Consensus       361 ~at~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~--~~~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~----~~  434 (705)
                      .....|...+.||+|+||.|..+.+..+|+.||||++..  ......++-++|+++|+.++|+||+.++.++..    .-
T Consensus        19 ~i~~~y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~~~f   98 (359)
T KOG0660|consen   19 EIPRYYVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSRDKF   98 (359)
T ss_pred             eccceecccccccCcceeeEEEEEEcCCCCEeehhhhhhhhhchHHHHHHHHHHHHHHHhcCCCcceEEeeccccccccc
Confidence            344566667899999999999999999999999999973  345567788999999999999999999998764    23


Q ss_pred             CceEEEEeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeecc
Q 005257          435 GSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGL  514 (705)
Q Consensus       435 ~~~~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGl  514 (705)
                      +.+|+|+|+|+ .+|...++...   .|+...+.-++.|+++||.|+|+   .+|+||||||+|+|++.+..+||+||||
T Consensus        99 ~DvYiV~elMe-tDL~~iik~~~---~L~d~H~q~f~YQiLrgLKyiHS---AnViHRDLKPsNll~n~~c~lKI~DFGL  171 (359)
T KOG0660|consen   99 NDVYLVFELME-TDLHQIIKSQQ---DLTDDHAQYFLYQILRGLKYIHS---ANVIHRDLKPSNLLLNADCDLKICDFGL  171 (359)
T ss_pred             ceeEEehhHHh-hHHHHHHHcCc---cccHHHHHHHHHHHHHhcchhhc---ccccccccchhheeeccCCCEEeccccc
Confidence            56899999994 59999997543   59999999999999999999999   9999999999999999999999999999


Q ss_pred             ceecCCC-CcceeeeeeccccCCCcccccc-CCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhHH
Q 005257          515 ARMHGHG-QVASTTRVVGTVGYLAPEVFSS-GRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDA  592 (705)
Q Consensus       515 a~~~~~~-~~~~~~~~~gt~~y~APE~~~~-~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~~  592 (705)
                      ||..... .....+..+.|.+|+|||++.. ..|+...||||.||++.||++|+..|.+.+.               .++
T Consensus       172 AR~~~~~~~~~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d~---------------v~Q  236 (359)
T KOG0660|consen  172 ARYLDKFFEDGFMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAEMLTGKPLFPGKDY---------------VHQ  236 (359)
T ss_pred             eeeccccCcccchhcceeeeeecCHHHHhccccccchhhhhhhhHHHHHHHcCCCCCCCCch---------------HHH
Confidence            9987543 2233466788999999999754 6799999999999999999999999987542               122


Q ss_pred             HHHhhhcCCCCCHHHHHHHH-----HHHHHcCCCCCCCC-CCHHHHHHHHHhccccCCCCCcchhhHHHHHHhhcccccc
Q 005257          593 LDARLRAKGGFDEDEVERVL-----HLGLLCAYPDPRAR-PTMRQVVKVLEGKIEAGIENETEDMDAYLLQQVKSKDMWA  666 (705)
Q Consensus       593 id~~l~~~~~~~~~~~~~l~-----~l~~~Cl~~dP~~R-Ps~~evl~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  666 (705)
                      +...+...+..+++....+.     ..+..+    |... -++.++               .........++++++..++
T Consensus       237 l~lI~~~lGtP~~e~l~~i~s~~ar~yi~sl----p~~p~~~f~~~---------------fp~a~p~AidLlekmL~fd  297 (359)
T KOG0660|consen  237 LQLILELLGTPSEEDLQKIRSEKARPYIKSL----PQIPKQPFSSI---------------FPNANPLAIDLLEKMLVFD  297 (359)
T ss_pred             HHHHHHhcCCCCHHHHHHhccHHHHHHHHhC----CCCCCCCHHHH---------------cCCCCHHHHHHHHHHhccC
Confidence            22222222333443332222     222222    2111 111111               1233455678888899999


Q ss_pred             ccccccccCCCCCCCccccccc
Q 005257          667 NYSRSFGYGYATHPTFHDIRQS  688 (705)
Q Consensus       667 ~~~r~~~~~~~~hp~f~~~~~~  688 (705)
                      |..|.++.+|+.||||......
T Consensus       298 P~kRita~eAL~hPYl~~~hdp  319 (359)
T KOG0660|consen  298 PKKRITAEEALAHPYLAPYHDP  319 (359)
T ss_pred             ccccCCHHHHhcChhhhhhcCC
Confidence            9999999999999999766543

>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=8.4e-40  Score=352.85  Aligned_cols=251  Identities=25%  Similarity=0.409  Sum_probs=208.1

Q ss_pred             HHhCCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccC----Cc-hhHHHHHHHHHHhccCC-CCCcceeeeeeeecc
Q 005257          361 AATKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHE----ND-GGTRAFLAEISSLGRLK-HKSLVGLRGWCKREK  434 (705)
Q Consensus       361 ~at~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~----~~-~~~~~~~~Ei~~l~~l~-Hpniv~l~g~~~~~~  434 (705)
                      ....+|...+.||+|+||+|+.|.+..+++.||+|.+...    .. ...+.+.+|+.++++++ ||||++++.++.. .
T Consensus        14 ~~~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t-~   92 (370)
T KOG0583|consen   14 LSIGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFAT-P   92 (370)
T ss_pred             cccCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEec-C
Confidence            3456889999999999999999999999999999977654    11 23455678999999999 9999999999887 5


Q ss_pred             CceEEEEeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccC-CCeeeeeec
Q 005257          435 GSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKE-MNGRLGDFG  513 (705)
Q Consensus       435 ~~~~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~-~~~kL~DFG  513 (705)
                      ..+++||||+.+|+|.+++.+.+   ++.+.+...++.|++.|++|||+   ++|+||||||+|||++.+ +++||+|||
T Consensus        93 ~~~~ivmEy~~gGdL~~~i~~~g---~l~E~~ar~~F~Qlisav~y~H~---~gi~HRDLK~ENilld~~~~~~Kl~DFG  166 (370)
T KOG0583|consen   93 TKIYIVMEYCSGGDLFDYIVNKG---RLKEDEARKYFRQLISAVAYCHS---RGIVHRDLKPENILLDGNEGNLKLSDFG  166 (370)
T ss_pred             CeEEEEEEecCCccHHHHHHHcC---CCChHHHHHHHHHHHHHHHHHHh---CCEeeCCCCHHHEEecCCCCCEEEeccc
Confidence            56999999999999999998722   68999999999999999999998   999999999999999999 999999999


Q ss_pred             cceecCCCCcceeeeeeccccCCCccccccCC-CC-ccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhH
Q 005257          514 LARMHGHGQVASTTRVVGTVGYLAPEVFSSGR-AS-TQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLD  591 (705)
Q Consensus       514 la~~~~~~~~~~~~~~~gt~~y~APE~~~~~~-~s-~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~  591 (705)
                      ++.... .........+||+.|+|||++.+.. |+ .++||||+||+||-|++|+.||++....  . ....+..+.   
T Consensus       167 ~s~~~~-~~~~~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d~~~~--~-l~~ki~~~~---  239 (370)
T KOG0583|consen  167 LSAISP-GEDGLLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFDDSNVP--N-LYRKIRKGE---  239 (370)
T ss_pred             cccccC-CCCCcccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCCccHH--H-HHHHHhcCC---
Confidence            999874 2222334469999999999999876 75 8899999999999999999999874321  1 111122221   


Q ss_pred             HHHHhhhcCCCCCHHH-HHHHHHHHHHcCCCCCCCCCCHHHHHH
Q 005257          592 ALDARLRAKGGFDEDE-VERVLHLGLLCAYPDPRARPTMRQVVK  634 (705)
Q Consensus       592 ~id~~l~~~~~~~~~~-~~~l~~l~~~Cl~~dP~~RPs~~evl~  634 (705)
                               ..++... ...+..++..|+.+||.+|+++.+++.
T Consensus       240 ---------~~~p~~~~S~~~~~Li~~mL~~~P~~R~t~~~i~~  274 (370)
T KOG0583|consen  240 ---------FKIPSYLLSPEARSLIEKMLVPDPSTRITLLEILE  274 (370)
T ss_pred             ---------ccCCCCcCCHHHHHHHHHHcCCCcccCCCHHHHhh
Confidence                     1222222 567889999999999999999999995

>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]

Probab=100.00  E-value=2.5e-40  Score=337.46  Aligned_cols=282  Identities=22%  Similarity=0.313  Sum_probs=210.5

Q ss_pred             CCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCCchhHHHHHHHHHHhccCCCCCcceeeeeeeeccC----ceEEE
Q 005257          365 GFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKG----SLMLV  440 (705)
Q Consensus       365 ~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~----~~~lV  440 (705)
                      .|...+++|.|+||.||+|+...+++.||||++-...+.    --+|+++|++++|||||+++-++....+    .+.+|
T Consensus        25 ~~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r~----knrEl~im~~l~HpNIV~L~~~f~~~~~~d~~~lnlV  100 (364)
T KOG0658|consen   25 SYEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDKRY----KNRELQIMRKLDHPNIVRLLYFFSSSTESDEVYLNLV  100 (364)
T ss_pred             EEEeeEEEeecccceEEEEEEcCCCceeEEEEecCCCCc----CcHHHHHHHhcCCcCeeeEEEEEEecCCCchhHHHHH
Confidence            466788999999999999999999999999998654332    2369999999999999999988763222    46789


Q ss_pred             EeeCCCCChhHHHHhc-CCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccC-CCeeeeeeccceec
Q 005257          441 YDYMENGSLDKWIFQC-DGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKE-MNGRLGDFGLARMH  518 (705)
Q Consensus       441 ~E~~~~gsL~~~L~~~-~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~-~~~kL~DFGla~~~  518 (705)
                      |||||. +|..+++.. ..+..++...+.-+..||++||.|||+   .+|+||||||.|+|+|.+ |.+||||||.|+..
T Consensus       101 leymP~-tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~---~~IcHRDIKPqNlLvD~~tg~LKicDFGSAK~L  176 (364)
T KOG0658|consen  101 LEYMPE-TLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHS---HGICHRDIKPQNLLVDPDTGVLKICDFGSAKVL  176 (364)
T ss_pred             HHhchH-HHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHh---cCcccCCCChheEEEcCCCCeEEeccCCcceee
Confidence            999987 999998752 223368888899999999999999998   999999999999999966 89999999999998


Q ss_pred             CCCCcceeeeeeccccCCCcccccc-CCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhHHHHHhh
Q 005257          519 GHGQVASTTRVVGTVGYLAPEVFSS-GRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDARL  597 (705)
Q Consensus       519 ~~~~~~~~~~~~gt~~y~APE~~~~-~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~l  597 (705)
                      ..+...  .....|+.|+|||.+.+ ..|+.+.||||.|||+.||+-|+..|.+.+..               +++...+
T Consensus       177 ~~~epn--iSYicSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~plFpG~s~~---------------dQL~eIi  239 (364)
T KOG0658|consen  177 VKGEPN--ISYICSRYYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQPLFPGDSSV---------------DQLVEII  239 (364)
T ss_pred             ccCCCc--eeEEEeccccCHHHHcCccccCceeEEhhhhHHHHHHhcCCcccCCCCHH---------------HHHHHHH
Confidence            776654  34567999999999977 56999999999999999999999999875421               1111111


Q ss_pred             hcCCCCCHHHHHHHHHHHHHcCCCC--CCCCCCHHHHHHHHHhccccCCCCCcchhhHHHHHHhhccccccccccccccC
Q 005257          598 RAKGGFDEDEVERVLHLGLLCAYPD--PRARPTMRQVVKVLEGKIEAGIENETEDMDAYLLQQVKSKDMWANYSRSFGYG  675 (705)
Q Consensus       598 ~~~~~~~~~~~~~l~~l~~~Cl~~d--P~~RPs~~evl~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~  675 (705)
                      +.-+....++..        |++++  -.+=|.....   -      ..+......+...++++.+...++|..|.++.+
T Consensus       240 k~lG~Pt~e~I~--------~mn~~y~~~~~p~ik~~---~------~~~~~~~~~~~d~~dll~~~L~Y~P~~R~~~~~  302 (364)
T KOG0658|consen  240 KVLGTPTREDIK--------SMNPNYTEFKFPQIKAH---P------WHKVFFKRLPPDALDLLSKLLQYSPSKRLSALE  302 (364)
T ss_pred             HHhCCCCHHHHh--------hcCcccccccCcccccc---c------ceeecccCCCHHHHHHHHHHhccChhhcCCHHH
Confidence            111333333221        22211  1111111100   0      000112233455667777778899999999999


Q ss_pred             CCCCCCccccccc
Q 005257          676 YATHPTFHDIRQS  688 (705)
Q Consensus       676 ~~~hp~f~~~~~~  688 (705)
                      +++||||+++|..
T Consensus       303 ~l~h~fFdelr~~  315 (364)
T KOG0658|consen  303 ALAHPFFDELRDP  315 (364)
T ss_pred             HhcchhhHHhhCc
Confidence            9999999999955

>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]

Probab=100.00  E-value=2.3e-40  Score=350.58  Aligned_cols=251  Identities=25%  Similarity=0.369  Sum_probs=213.0

Q ss_pred             hCCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccC---CchhHHHHHHHHHHhccC-CCCCcceeeeeeeeccCceE
Q 005257          363 TKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHE---NDGGTRAFLAEISSLGRL-KHKSLVGLRGWCKREKGSLM  438 (705)
Q Consensus       363 t~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~---~~~~~~~~~~Ei~~l~~l-~Hpniv~l~g~~~~~~~~~~  438 (705)
                      .++|...+.||+|+|++|++|+.+.+++.+|||++.+.   .....+-...|-.+|.+| .||.|++|+--+.+ +..+|
T Consensus        72 ~~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD-~~sLY  150 (604)
T KOG0592|consen   72 PNDFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQD-EESLY  150 (604)
T ss_pred             hhhcchhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEeec-ccceE
Confidence            45678899999999999999999999999999998654   223344567899999999 89999999988876 67899


Q ss_pred             EEEeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceec
Q 005257          439 LVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMH  518 (705)
Q Consensus       439 lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~  518 (705)
                      +|+||+++|+|.++|.+.+   .|++...+.++.+|+.||+|||+   +|||||||||+|||||+|+++||.|||.|+.+
T Consensus       151 FvLe~A~nGdll~~i~K~G---sfde~caR~YAAeIldAleylH~---~GIIHRDlKPENILLd~dmhikITDFGsAK~l  224 (604)
T KOG0592|consen  151 FVLEYAPNGDLLDLIKKYG---SFDETCARFYAAEILDALEYLHS---NGIIHRDLKPENILLDKDGHIKITDFGSAKIL  224 (604)
T ss_pred             EEEEecCCCcHHHHHHHhC---cchHHHHHHHHHHHHHHHHHHHh---cCceeccCChhheeEcCCCcEEEeeccccccC
Confidence            9999999999999998764   69999999999999999999999   99999999999999999999999999999877


Q ss_pred             CCCCcc----------e--eeeeeccccCCCccccccCCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHh
Q 005257          519 GHGQVA----------S--TTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQ  586 (705)
Q Consensus       519 ~~~~~~----------~--~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~  586 (705)
                      ......          .  ...++||..|.+||++..+..+..+|+|+|||+||+|+.|++||....+.+.         
T Consensus       225 ~~~~~~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGCilyQmlaG~PPFra~Neyli---------  295 (604)
T KOG0592|consen  225 SPSQKSQENPVDPNQASSRRSSFVGTAEYVSPELLNDSPAGPSSDLWALGCILYQMLAGQPPFRAANEYLI---------  295 (604)
T ss_pred             ChhhccccCccCcccccCcccceeeeecccCHHHhcCCCCCcccchHHHHHHHHHHhcCCCCCccccHHHH---------
Confidence            543221          1  1458999999999999999999999999999999999999999988765321         


Q ss_pred             CchhHHHHHhhhcCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 005257          587 GKLLDALDARLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKV  635 (705)
Q Consensus       587 ~~~~~~id~~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  635 (705)
                            +.+.+.....+++..++.+.+|+.+.+..||.+|++.+||.++
T Consensus       296 ------FqkI~~l~y~fp~~fp~~a~dLv~KLLv~dp~~Rlt~~qIk~H  338 (604)
T KOG0592|consen  296 ------FQKIQALDYEFPEGFPEDARDLIKKLLVRDPSDRLTSQQIKAH  338 (604)
T ss_pred             ------HHHHHHhcccCCCCCCHHHHHHHHHHHccCccccccHHHHhhC
Confidence                  1111122244555666788899999999999999999988875

>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]

Probab=100.00  E-value=1.6e-40  Score=351.21  Aligned_cols=248  Identities=25%  Similarity=0.355  Sum_probs=213.7

Q ss_pred             CCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCC--chhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEEEE
Q 005257          364 KGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHEN--DGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVY  441 (705)
Q Consensus       364 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~--~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~lV~  441 (705)
                      ++|...+.||+|.||+||||+.+.+.+.||+|.+.+..  +.+.+.+.+|++++++|+||||+.+++|+.. ..++++|.
T Consensus         2 e~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lkHpniv~m~esfEt-~~~~~vVt   80 (808)
T KOG0597|consen    2 EQYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLKHPNIVEMLESFET-SAHLWVVT   80 (808)
T ss_pred             cchhHHHHhcCCccceeeecccccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcCCcchhhHHHhhcc-cceEEEEe
Confidence            46778889999999999999999999999999997653  3456778999999999999999999999986 78999999


Q ss_pred             eeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecCCC
Q 005257          442 DYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHG  521 (705)
Q Consensus       442 E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~~~  521 (705)
                      ||+.| +|..+|.+..   .++++.+..++.++..||.|||+   .+|+|||+||.|||++.++.+|+||||+|+.+...
T Consensus        81 e~a~g-~L~~il~~d~---~lpEe~v~~~a~~LVsaL~yLhs---~rilhrd~kPqniLl~~~~~~KlcdFg~Ar~m~~~  153 (808)
T KOG0597|consen   81 EYAVG-DLFTILEQDG---KLPEEQVRAIAYDLVSALYYLHS---NRILHRDMKPQNILLEKGGTLKLCDFGLARAMSTN  153 (808)
T ss_pred             hhhhh-hHHHHHHhcc---CCCHHHHHHHHHHHHHHHHHHHh---cCcccccCCcceeeecCCCceeechhhhhhhcccC
Confidence            99976 9999997654   69999999999999999999999   99999999999999999999999999999987664


Q ss_pred             CcceeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhHHHHHhhhcCC
Q 005257          522 QVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRAKG  601 (705)
Q Consensus       522 ~~~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~l~~~~  601 (705)
                      . ...+...|||.|||||++.+++|+..+|+||+||++||+.+|++||....  +             .+.+...+....
T Consensus       154 t-~vltsikGtPlYmAPElv~e~pyd~~sDlWslGcilYE~~~G~PPF~a~s--i-------------~~Lv~~I~~d~v  217 (808)
T KOG0597|consen  154 T-SVLTSIKGTPLYMAPELVEEQPYDHTSDLWSLGCILYELYVGQPPFYARS--I-------------TQLVKSILKDPV  217 (808)
T ss_pred             c-eeeeeccCcccccCHHHHcCCCccchhhHHHHHHHHHHHhcCCCCchHHH--H-------------HHHHHHHhcCCC
Confidence            3 34566889999999999999999999999999999999999999996532  1             222233333334


Q ss_pred             CCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 005257          602 GFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKV  635 (705)
Q Consensus       602 ~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  635 (705)
                      .++......+..++.-.+.+||.+|-+..+++.+
T Consensus       218 ~~p~~~S~~f~nfl~gLL~kdP~~RltW~~Ll~H  251 (808)
T KOG0597|consen  218 KPPSTASSSFVNFLQGLLIKDPAQRLTWTDLLGH  251 (808)
T ss_pred             CCcccccHHHHHHHHHHhhcChhhcccHHHHhcC
Confidence            4455666778888888999999999999998763

>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4

Probab=100.00  E-value=2.7e-39  Score=340.00  Aligned_cols=252  Identities=26%  Similarity=0.414  Sum_probs=203.7

Q ss_pred             CCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCC---chhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEEEE
Q 005257          365 GFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHEN---DGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVY  441 (705)
Q Consensus       365 ~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~---~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~lV~  441 (705)
                      .|+..+.||+|+||.||+|.+..+++.||+|.+....   ......+.+|++++.+++|+||+++.+.+.. ++..++||
T Consensus         1 ~f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~~-~~~~~lv~   79 (285)
T cd05631           1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAYET-KDALCLVL   79 (285)
T ss_pred             CceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEEcc-CCeEEEEE
Confidence            3677899999999999999999899999999986542   2234467899999999999999999998876 66899999


Q ss_pred             eeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecCCC
Q 005257          442 DYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHG  521 (705)
Q Consensus       442 E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~~~  521 (705)
                      ||+++|+|..++..... ..+++..+..++.|++.||.|||+   .+|+||||||+|||+++++.+||+|||++......
T Consensus        80 e~~~~g~L~~~~~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~---~~iiH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~  155 (285)
T cd05631          80 TIMNGGDLKFHIYNMGN-PGFDEQRAIFYAAELCCGLEDLQR---ERIVYRDLKPENILLDDRGHIRISDLGLAVQIPEG  155 (285)
T ss_pred             EecCCCcHHHHHHhhCC-CCCCHHHHHHHHHHHHHHHHHHHh---CCEEeCCCCHHHEEECCCCCEEEeeCCCcEEcCCC
Confidence            99999999988865432 268999999999999999999998   99999999999999999999999999999875433


Q ss_pred             CcceeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhHHHHHhhh-cC
Q 005257          522 QVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDARLR-AK  600 (705)
Q Consensus       522 ~~~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~l~-~~  600 (705)
                      ..  .....||..|+|||++.+..++.++|||||||++|||++|+.||.........            +.++..+. ..
T Consensus       156 ~~--~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~------------~~~~~~~~~~~  221 (285)
T cd05631         156 ET--VRGRVGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQGQSPFRKRKERVKR------------EEVDRRVKEDQ  221 (285)
T ss_pred             Ce--ecCCCCCCCccCHhhhcCCCCCcccCchhHHHHHHHHHhCCCCCCCCCcchhH------------HHHHHHhhccc
Confidence            21  23357899999999999999999999999999999999999999865432110            11111111 01


Q ss_pred             CCCCHHHHHHHHHHHHHcCCCCCCCCCC-----HHHHHHH
Q 005257          601 GGFDEDEVERVLHLGLLCAYPDPRARPT-----MRQVVKV  635 (705)
Q Consensus       601 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPs-----~~evl~~  635 (705)
                      ..++......+.+++..||+.||++||+     +.+++++
T Consensus       222 ~~~~~~~s~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~h  261 (285)
T cd05631         222 EEYSEKFSEDAKSICRMLLTKNPKERLGCRGNGAAGVKQH  261 (285)
T ss_pred             ccCCccCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHhcC
Confidence            1223334467889999999999999997     7777763

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i

>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=100.00  E-value=7.8e-40  Score=354.63  Aligned_cols=260  Identities=29%  Similarity=0.424  Sum_probs=210.5

Q ss_pred             HhCCCCcceEEeecCceEEEEEEEcCCC----eEEEEEEecc---CCchhHHHHHHHHHHhccCCCCCcceeeeeeeecc
Q 005257          362 ATKGFSEENVIGVGGNGKVYKGVLEGGG----AEIAVKRISH---ENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREK  434 (705)
Q Consensus       362 at~~f~~~~~LG~G~fg~Vy~~~~~~~~----~~vavK~i~~---~~~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~  434 (705)
                      ..++....++||+|+||.||+|.+...+    ..||||..+.   .......+|++|.++|+.++|||||+++|++.. +
T Consensus       155 ~H~~v~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVVr~yGVa~~-~  233 (474)
T KOG0194|consen  155 SHSDIELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVVRFYGVAVL-E  233 (474)
T ss_pred             eccCccccceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcC-C
Confidence            3344555689999999999999987542    2389999875   246678899999999999999999999999987 6


Q ss_pred             CceEEEEeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeecc
Q 005257          435 GSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGL  514 (705)
Q Consensus       435 ~~~~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGl  514 (705)
                      ..++||||+|+||+|+++|.+.+.  .++..++..++.+.|.||+|||+   +++|||||.++|+|++.++.+||+||||
T Consensus       234 ~Pl~ivmEl~~gGsL~~~L~k~~~--~v~~~ek~~~~~~AA~Gl~YLh~---k~~IHRDIAARNcL~~~~~~vKISDFGL  308 (474)
T KOG0194|consen  234 EPLMLVMELCNGGSLDDYLKKNKK--SLPTLEKLRFCYDAARGLEYLHS---KNCIHRDIAARNCLYSKKGVVKISDFGL  308 (474)
T ss_pred             CccEEEEEecCCCcHHHHHHhCCC--CCCHHHHHHHHHHHHhHHHHHHH---CCCcchhHhHHHheecCCCeEEeCcccc
Confidence            789999999999999999988664  59999999999999999999998   9999999999999999999999999999


Q ss_pred             ceecCCCCcceeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhh-CCCCCCCCCccHHHHHHHHHHhCchhHHH
Q 005257          515 ARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLS-GRRPIEEGKPNLVEMVWELMVQGKLLDAL  593 (705)
Q Consensus       515 a~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~Ellt-G~~Pf~~~~~~~~~~v~~~~~~~~~~~~i  593 (705)
                      ++....-.. ......-+..|+|||.+..+.++.++|||||||++||+.+ |..||.+....   .+...+..       
T Consensus       309 s~~~~~~~~-~~~~~klPirWLAPEtl~~~~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~~~---~v~~kI~~-------  377 (474)
T KOG0194|consen  309 SRAGSQYVM-KKFLKKLPIRWLAPETLNTGIFSFKTDVWSFGVLLWEIFENGAEPYPGMKNY---EVKAKIVK-------  377 (474)
T ss_pred             ccCCcceee-ccccccCcceecChhhhccCccccccchhheeeeEEeeeccCCCCCCCCCHH---HHHHHHHh-------
Confidence            886531111 1101123678999999999999999999999999999998 88899875431   12222211       


Q ss_pred             HHhhhcCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHhccc
Q 005257          594 DARLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLEGKIE  641 (705)
Q Consensus       594 d~~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~  641 (705)
                       ...+  ...+...+..+..++..||..+|++||+|.++.+.|+....
T Consensus       378 -~~~r--~~~~~~~p~~~~~~~~~c~~~~p~~R~tm~~i~~~l~~~~~  422 (474)
T KOG0194|consen  378 -NGYR--MPIPSKTPKELAKVMKQCWKKDPEDRPTMSTIKKKLEALEK  422 (474)
T ss_pred             -cCcc--CCCCCCCHHHHHHHHHHhccCChhhccCHHHHHHHHHHHHh
Confidence             1111  22333556677888889999999999999999999987665

>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=100.00  E-value=1.6e-40  Score=353.01  Aligned_cols=257  Identities=24%  Similarity=0.423  Sum_probs=220.7

Q ss_pred             CCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCCchhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEEEEeeC
Q 005257          365 GFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYM  444 (705)
Q Consensus       365 ~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~lV~E~~  444 (705)
                      +....++||-|.||.||.|+++.....||||.++. +....++|+.|..+|+.++|||+|+|+|+|.. +...|||+|||
T Consensus       268 dItMkhKLGGGQYGeVYeGvWKkyslTvAVKtLKE-DtMeveEFLkEAAvMKeikHpNLVqLLGVCT~-EpPFYIiTEfM  345 (1157)
T KOG4278|consen  268 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTH-EPPFYIITEFM  345 (1157)
T ss_pred             heeeeeccCCCcccceeeeeeeccceeeehhhhhh-cchhHHHHHHHHHHHHhhcCccHHHHhhhhcc-CCCeEEEEecc
Confidence            34557899999999999999999889999999854 45567899999999999999999999999987 66899999999


Q ss_pred             CCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecCCCCcc
Q 005257          445 ENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVA  524 (705)
Q Consensus       445 ~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~~~~~~  524 (705)
                      .+|+|.+||++++.. .++...++.++.||+.||.||..   +++|||||.++|+|+.++..+|++||||+|++..+...
T Consensus       346 ~yGNLLdYLRecnr~-ev~avvLlyMAtQIsSaMeYLEk---knFIHRDLAARNCLVgEnhiVKvADFGLsRlMtgDTYT  421 (1157)
T KOG4278|consen  346 CYGNLLDYLRECNRS-EVPAVVLLYMATQISSAMEYLEK---KNFIHRDLAARNCLVGENHIVKVADFGLSRLMTGDTYT  421 (1157)
T ss_pred             cCccHHHHHHHhchh-hcchhHHHHHHHHHHHHHHHHHH---hhhhhhhhhhhhccccccceEEeeccchhhhhcCCcee
Confidence            999999999998765 67888889999999999999998   99999999999999999999999999999998766544


Q ss_pred             eeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhh-CCCCCCCCCccHHHHHHHHHHhCchhHHHHHhhhcCCCC
Q 005257          525 STTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLS-GRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRAKGGF  603 (705)
Q Consensus       525 ~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~Ellt-G~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~l~~~~~~  603 (705)
                      ......-...|.|||.+....++.|+|||+|||+||||.| |..||.+.+-   ..|..++.+         ..+.  +-
T Consensus       422 AHAGAKFPIKWTAPEsLAyNtFSiKSDVWAFGVLLWEIATYGMsPYPGidl---SqVY~LLEk---------gyRM--~~  487 (1157)
T KOG4278|consen  422 AHAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGIDL---SQVYGLLEK---------GYRM--DG  487 (1157)
T ss_pred             cccCccCcccccCcccccccccccchhhHHHHHHHHHHHhcCCCCCCCccH---HHHHHHHhc---------cccc--cC
Confidence            3332333678999999999999999999999999999998 9999987542   233333333         3332  23


Q ss_pred             CHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHhccc
Q 005257          604 DEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLEGKIE  641 (705)
Q Consensus       604 ~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~  641 (705)
                      +..|++.+.+|++.||+.+|.+||++.|+-+.++.++.
T Consensus       488 PeGCPpkVYeLMraCW~WsPsDRPsFaeiHqafEtmf~  525 (1157)
T KOG4278|consen  488 PEGCPPKVYELMRACWNWSPSDRPSFAEIHQAFETMFS  525 (1157)
T ss_pred             CCCCCHHHHHHHHHHhcCCcccCccHHHHHHHHHHHhc
Confidence            55677889999999999999999999999999987765

>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

Probab=100.00  E-value=3e-39  Score=346.08  Aligned_cols=243  Identities=24%  Similarity=0.339  Sum_probs=199.9

Q ss_pred             eEEeecCceEEEEEEEcCCCeEEEEEEeccC---CchhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEEEEeeCCC
Q 005257          370 NVIGVGGNGKVYKGVLEGGGAEIAVKRISHE---NDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMEN  446 (705)
Q Consensus       370 ~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~---~~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~lV~E~~~~  446 (705)
                      +.||+|+||.||++....+++.||||+++..   .......+.+|+.++++++||||+++++++.. .+.+++||||+++
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~-~~~~~lv~e~~~~   79 (323)
T cd05571           1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSFQT-HDRLCFVMEYANG   79 (323)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEEc-CCEEEEEEeCCCC
Confidence            4699999999999999999999999998754   23344568899999999999999999998876 6789999999999


Q ss_pred             CChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecCCCCccee
Q 005257          447 GSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVAST  526 (705)
Q Consensus       447 gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~~~~~~~~  526 (705)
                      |+|.+++....   .+++.++..++.||+.||+|||+   .+|+||||||+|||++.++.+||+|||+++...... ...
T Consensus        80 ~~L~~~l~~~~---~~~~~~~~~~~~qi~~~L~~lH~---~~ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~~~~-~~~  152 (323)
T cd05571          80 GELFFHLSRER---VFSEDRARFYGAEIVSALGYLHS---CDVVYRDLKLENLMLDKDGHIKITDFGLCKEGISDG-ATM  152 (323)
T ss_pred             CcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHh---CCeEeCCCCHHHEEECCCCCEEEeeCCCCcccccCC-Ccc
Confidence            99999987543   68999999999999999999998   999999999999999999999999999987532221 122


Q ss_pred             eeeeccccCCCccccccCCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhHHHHHhhhcCCCCCHH
Q 005257          527 TRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRAKGGFDED  606 (705)
Q Consensus       527 ~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~l~~~~~~~~~  606 (705)
                      ....||+.|+|||++.+..++.++|||||||++|||++|+.||......   .....+..+.            ..++..
T Consensus       153 ~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~---~~~~~~~~~~------------~~~p~~  217 (323)
T cd05571         153 KTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE---KLFELILMEE------------IRFPRT  217 (323)
T ss_pred             cceecCccccChhhhcCCCCCccccCcccchhhhhhhcCCCCCCCCCHH---HHHHHHHcCC------------CCCCCC
Confidence            3467999999999999889999999999999999999999999764321   1111111111            122333


Q ss_pred             HHHHHHHHHHHcCCCCCCCCC-----CHHHHHHH
Q 005257          607 EVERVLHLGLLCAYPDPRARP-----TMRQVVKV  635 (705)
Q Consensus       607 ~~~~l~~l~~~Cl~~dP~~RP-----s~~evl~~  635 (705)
                      ....+.+++..||+.||++||     ++.+++++
T Consensus       218 ~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~h  251 (323)
T cd05571         218 LSPEAKSLLAGLLKKDPKQRLGGGPEDAKEIMEH  251 (323)
T ss_pred             CCHHHHHHHHHHccCCHHHcCCCCCCCHHHHHcC
Confidence            446688999999999999999     78888763

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be

>PHA02988 hypothetical protein; Provisional

Probab=100.00  E-value=6.4e-39  Score=337.07  Aligned_cols=259  Identities=17%  Similarity=0.311  Sum_probs=205.8

Q ss_pred             cccCHHHHHHHhCCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCCchh---HHHHHHHHHHhccCCCCCcceeee
Q 005257          352 HRITYQEIEAATKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGG---TRAFLAEISSLGRLKHKSLVGLRG  428 (705)
Q Consensus       352 ~~~~~~el~~at~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~~~---~~~~~~Ei~~l~~l~Hpniv~l~g  428 (705)
                      +.++++++.     ......||+|++|.||+|.+  +|+.||||+++......   .+.|.+|+.+|.+++||||+++++
T Consensus        13 ~~i~~~~i~-----~~~~~~i~~g~~~~v~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g   85 (283)
T PHA02988         13 KCIESDDID-----KYTSVLIKENDQNSIYKGIF--NNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIYG   85 (283)
T ss_pred             eecCHHHcC-----CCCCeEEeeCCceEEEEEEE--CCEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEEee
Confidence            344555552     23346799999999999998  47899999997653322   467889999999999999999999


Q ss_pred             eeee--c-cCceEEEEeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCC
Q 005257          429 WCKR--E-KGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEM  505 (705)
Q Consensus       429 ~~~~--~-~~~~~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~  505 (705)
                      ++.+  + ...+++||||+++|+|.+++.+..   .+++....+++.|++.||.|||+  ..+++||||||+|||+++++
T Consensus        86 ~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~~~~---~~~~~~~~~i~~~i~~~l~~lH~--~~~~~Hrdlkp~nill~~~~  160 (283)
T PHA02988         86 FIIDIVDDLPRLSLILEYCTRGYLREVLDKEK---DLSFKTKLDMAIDCCKGLYNLYK--YTNKPYKNLTSVSFLVTENY  160 (283)
T ss_pred             eEEecccCCCceEEEEEeCCCCcHHHHHhhCC---CCChhHHHHHHHHHHHHHHHHHh--cCCCCCCcCChhhEEECCCC
Confidence            8865  2 346899999999999999997543   68999999999999999999997  24788999999999999999


Q ss_pred             CeeeeeeccceecCCCCcceeeeeeccccCCCcccccc--CCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHH
Q 005257          506 NGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSS--GRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWEL  583 (705)
Q Consensus       506 ~~kL~DFGla~~~~~~~~~~~~~~~gt~~y~APE~~~~--~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~  583 (705)
                      .+||+|||+++......    ....|+..|+|||++.+  ..++.++|||||||++|||++|+.||......  + +...
T Consensus       161 ~~kl~dfg~~~~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~~~~--~-~~~~  233 (283)
T PHA02988        161 KLKIICHGLEKILSSPP----FKNVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENLTTK--E-IYDL  233 (283)
T ss_pred             cEEEcccchHhhhcccc----ccccCcccccCHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCCCCCHH--H-HHHH
Confidence            99999999998654322    12467899999999976  67999999999999999999999999864321  1 1111


Q ss_pred             HHhCchhHHHHHhhhcCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHhc
Q 005257          584 MVQGKLLDALDARLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLEGK  639 (705)
Q Consensus       584 ~~~~~~~~~id~~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~  639 (705)
                      +..+..        +  ...+......+.+++.+||+.||++|||+.++++.|+..
T Consensus       234 i~~~~~--------~--~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~l~~~  279 (283)
T PHA02988        234 IINKNN--------S--LKLPLDCPLEIKCIVEACTSHDSIKRPNIKEILYNLSLY  279 (283)
T ss_pred             HHhcCC--------C--CCCCCcCcHHHHHHHHHHhcCCcccCcCHHHHHHHHHHH
Confidence            111110        0  112224556789999999999999999999999999854

>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10

Probab=100.00  E-value=1.9e-39  Score=337.50  Aligned_cols=257  Identities=26%  Similarity=0.421  Sum_probs=206.1

Q ss_pred             hCCCCcceEEeecCceEEEEEEEc---CCCeEEEEEEeccCCc-hhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceE
Q 005257          363 TKGFSEENVIGVGGNGKVYKGVLE---GGGAEIAVKRISHEND-GGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLM  438 (705)
Q Consensus       363 t~~f~~~~~LG~G~fg~Vy~~~~~---~~~~~vavK~i~~~~~-~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~  438 (705)
                      .++|+..+.||+|+||.||+|.+.   ..+..||+|.++.... ...+.+.+|+.++.+++||||+++++++.. ++..+
T Consensus         4 ~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~   82 (266)
T cd05064           4 NKSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQRRGFLAEALTLGQFDHSNIVRLEGVITR-GNTMM   82 (266)
T ss_pred             hHHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEec-CCCcE
Confidence            346788999999999999999875   3467899999876533 345678999999999999999999998876 67899


Q ss_pred             EEEeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceec
Q 005257          439 LVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMH  518 (705)
Q Consensus       439 lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~  518 (705)
                      +||||+++|+|.+++.....  .+++.+++.++.|++.||+|||+   ++++||||||+|||++.++.+|++|||.+...
T Consensus        83 lv~e~~~~~~L~~~l~~~~~--~l~~~~~~~~~~~i~~al~~lH~---~~iiH~dikp~nili~~~~~~~l~dfg~~~~~  157 (266)
T cd05064          83 IVTEYMSNGALDSFLRKHEG--QLVAGQLMGMLPGLASGMKYLSE---MGYVHKGLAAHKVLVNSDLVCKISGFRRLQED  157 (266)
T ss_pred             EEEEeCCCCcHHHHHHhCCC--CCCHHHHHHHHHHHHHHHHHHHH---CCEeeccccHhhEEEcCCCcEEECCCcccccc
Confidence            99999999999999976432  68999999999999999999998   99999999999999999999999999987654


Q ss_pred             CCCCcceeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhh-CCCCCCCCCccHHHHHHHHHHhCchhHHHHHhh
Q 005257          519 GHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLS-GRRPIEEGKPNLVEMVWELMVQGKLLDALDARL  597 (705)
Q Consensus       519 ~~~~~~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~Ellt-G~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~l  597 (705)
                      ............++..|+|||.+.+..++.++|||||||++||+++ |+.||......   .....+..+..        
T Consensus       158 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~p~~~~~~~---~~~~~~~~~~~--------  226 (266)
T cd05064         158 KSEAIYTTMSGKSPVLWAAPEAIQYHHFSSASDVWSFGIVMWEVMSYGERPYWDMSGQ---DVIKAVEDGFR--------  226 (266)
T ss_pred             cccchhcccCCCCceeecCHHHHhhCCccchhHHHHHHHHHHHHhcCCCCCcCcCCHH---HHHHHHHCCCC--------
Confidence            3222111112334678999999998999999999999999999775 99999764421   11112222111        


Q ss_pred             hcCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHhc
Q 005257          598 RAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLEGK  639 (705)
Q Consensus       598 ~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~  639 (705)
                         ...+...+..+.+++..||+.+|++||++.++.+.|+..
T Consensus       227 ---~~~~~~~~~~~~~li~~c~~~~p~~RP~~~~i~~~l~~~  265 (266)
T cd05064         227 ---LPAPRNCPNLLHQLMLDCWQKERGERPRFSQIHSILSKM  265 (266)
T ss_pred             ---CCCCCCCCHHHHHHHHHHcCCCchhCCCHHHHHHHHHhh
Confidence               112334456788999999999999999999999998754

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor

>PTZ00263 protein kinase A catalytic subunit; Provisional

Probab=100.00  E-value=3.7e-39  Score=346.29  Aligned_cols=246  Identities=23%  Similarity=0.331  Sum_probs=203.9

Q ss_pred             CCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccC---CchhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEEE
Q 005257          364 KGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHE---NDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLV  440 (705)
Q Consensus       364 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~---~~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~lV  440 (705)
                      ++|...+.||+|+||.||+|.+..+++.||||++...   .....+.+.+|+.++++++||||+++++++.. ++..++|
T Consensus        18 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~~lv   96 (329)
T PTZ00263         18 SDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQD-ENRVYFL   96 (329)
T ss_pred             hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEEc-CCEEEEE
Confidence            4688899999999999999999999999999998653   22345678999999999999999999998876 6789999


Q ss_pred             EeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecCC
Q 005257          441 YDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGH  520 (705)
Q Consensus       441 ~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~~  520 (705)
                      |||+++|+|.+++.+..   .+++..+..++.|++.||+|||+   ++|+||||||+|||++.++.+||+|||+++....
T Consensus        97 ~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH~---~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~  170 (329)
T PTZ00263         97 LEFVVGGELFTHLRKAG---RFPNDVAKFYHAELVLAFEYLHS---KDIIYRDLKPENLLLDNKGHVKVTDFGFAKKVPD  170 (329)
T ss_pred             EcCCCCChHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHH---CCeeecCCCHHHEEECCCCCEEEeeccCceEcCC
Confidence            99999999999997543   68899999999999999999998   9999999999999999999999999999987643


Q ss_pred             CCcceeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhHHHHHhhhcC
Q 005257          521 GQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRAK  600 (705)
Q Consensus       521 ~~~~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~l~~~  600 (705)
                      ..    ....||+.|+|||++.+..++.++|||||||++|||++|+.||.....   ....+.+..+..           
T Consensus       171 ~~----~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~---~~~~~~i~~~~~-----------  232 (329)
T PTZ00263        171 RT----FTLCGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYPPFFDDTP---FRIYEKILAGRL-----------  232 (329)
T ss_pred             Cc----ceecCChhhcCHHHHcCCCCCCcceeechHHHHHHHHcCCCCCCCCCH---HHHHHHHhcCCc-----------
Confidence            22    235799999999999998899999999999999999999999976442   112222222211           


Q ss_pred             CCCCHHHHHHHHHHHHHcCCCCCCCCCC-----HHHHHHH
Q 005257          601 GGFDEDEVERVLHLGLLCAYPDPRARPT-----MRQVVKV  635 (705)
Q Consensus       601 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPs-----~~evl~~  635 (705)
                       .++......+.+++..||+.||.+||+     +++++.+
T Consensus       233 -~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~h  271 (329)
T PTZ00263        233 -KFPNWFDGRARDLVKGLLQTDHTKRLGTLKGGVADVKNH  271 (329)
T ss_pred             -CCCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcC
Confidence             112223346788999999999999997     5766654

>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1

Probab=100.00  E-value=5.9e-39  Score=340.48  Aligned_cols=262  Identities=24%  Similarity=0.367  Sum_probs=202.7

Q ss_pred             CCCCcceEEeecCceEEEEEEEcC----------------CCeEEEEEEeccCC-chhHHHHHHHHHHhccCCCCCccee
Q 005257          364 KGFSEENVIGVGGNGKVYKGVLEG----------------GGAEIAVKRISHEN-DGGTRAFLAEISSLGRLKHKSLVGL  426 (705)
Q Consensus       364 ~~f~~~~~LG~G~fg~Vy~~~~~~----------------~~~~vavK~i~~~~-~~~~~~~~~Ei~~l~~l~Hpniv~l  426 (705)
                      ++|...++||+|+||.||+|.+..                ++..||+|.+.... .....+|.+|++++.+++||||+++
T Consensus         5 ~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~   84 (304)
T cd05096           5 GHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDFLKEVKILSRLKDPNIIRL   84 (304)
T ss_pred             hhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCeeEE
Confidence            467889999999999999998642                34579999987653 3345679999999999999999999


Q ss_pred             eeeeeeccCceEEEEeeCCCCChhHHHHhcCC----------------CCcccHHHHHHHHHHHHHHHHHHhcCCCCCee
Q 005257          427 RGWCKREKGSLMLVYDYMENGSLDKWIFQCDG----------------SMMLSCEERIRVLKDVAAGVLYLHEGWEKKVL  490 (705)
Q Consensus       427 ~g~~~~~~~~~~lV~E~~~~gsL~~~L~~~~~----------------~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ii  490 (705)
                      ++++.. .+..++||||+++|+|.+++.....                ...+++.++.+++.|++.||.|||+   .+|+
T Consensus        85 ~~~~~~-~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~---~~iv  160 (304)
T cd05096          85 LGVCVD-EDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSS---LNFV  160 (304)
T ss_pred             EEEEec-CCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHH---CCcc
Confidence            999876 5678999999999999999865321                1247889999999999999999998   9999


Q ss_pred             ecCCCCCCeEEccCCCeeeeeeccceecCCCCcc-eeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhh--CCC
Q 005257          491 HRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVA-STTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLS--GRR  567 (705)
Q Consensus       491 HrDLkp~NILld~~~~~kL~DFGla~~~~~~~~~-~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~Ellt--G~~  567 (705)
                      ||||||+|||++.++.+||+|||+++........ ......++..|||||++..+.++.++|||||||++|||++  +..
T Consensus       161 H~dlkp~Nill~~~~~~kl~DfG~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~  240 (304)
T cd05096         161 HRDLATRNCLVGENLTIKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWECILMGKFTTASDVWAFGVTLWEILMLCKEQ  240 (304)
T ss_pred             ccCcchhheEEcCCccEEECCCccceecccCceeEecCcCCCCccccCHHHHhcCCCCchhhhHHHHHHHHHHHHccCCC
Confidence            9999999999999999999999999865433221 1222345788999999988899999999999999999986  566


Q ss_pred             CCCCCCcc-HHHHHHHHHHhCchhHHHHHhhhcCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHH
Q 005257          568 PIEEGKPN-LVEMVWELMVQGKLLDALDARLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLE  637 (705)
Q Consensus       568 Pf~~~~~~-~~~~v~~~~~~~~~~~~id~~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  637 (705)
                      ||...... ....+.........      ...  ...+..++..+.+++.+||+.||++|||+.+|.+.|+
T Consensus       241 p~~~~~~~~~~~~~~~~~~~~~~------~~~--~~~~~~~~~~~~~li~~cl~~~p~~RPs~~~i~~~l~  303 (304)
T cd05096         241 PYGELTDEQVIENAGEFFRDQGR------QVY--LFRPPPCPQGLYELMLQCWSRDCRERPSFSDIHAFLT  303 (304)
T ss_pred             CCCcCCHHHHHHHHHHHhhhccc------ccc--ccCCCCCCHHHHHHHHHHccCCchhCcCHHHHHHHHh
Confidence            77653321 11111111111000      000  1112234567899999999999999999999999886

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k

>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]

Probab=100.00  E-value=1.6e-39  Score=339.13  Aligned_cols=264  Identities=27%  Similarity=0.364  Sum_probs=201.6

Q ss_pred             CCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCCchhHHHHHHHHHHhcc--CCCCCcceeeeeeeec---cCceE
Q 005257          364 KGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGR--LKHKSLVGLRGWCKRE---KGSLM  438 (705)
Q Consensus       364 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~~~~~~~~~Ei~~l~~--l~Hpniv~l~g~~~~~---~~~~~  438 (705)
                      ...+..++||+|+||.||||.+.  ++.||||++.   .+..+.|.+|-++.+.  ++|+||+++++.-...   ...++
T Consensus       210 ~pl~l~eli~~Grfg~V~KaqL~--~~~VAVKifp---~~~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~~~eyw  284 (534)
T KOG3653|consen  210 DPLQLLELIGRGRFGCVWKAQLD--NRLVAVKIFP---EQEKQSFQNEKNIYSLPGMKHENILQFIGAEKRGTADRMEYW  284 (534)
T ss_pred             CchhhHHHhhcCccceeehhhcc--CceeEEEecC---HHHHHHHHhHHHHHhccCccchhHHHhhchhccCCcccccee
Confidence            34556778999999999999996  5899999985   3455677777776554  5899999999965431   23789


Q ss_pred             EEEeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCC------CCCeeecCCCCCCeEEccCCCeeeeee
Q 005257          439 LVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGW------EKKVLHRDIKSSNVLLDKEMNGRLGDF  512 (705)
Q Consensus       439 lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~------~~~iiHrDLkp~NILld~~~~~kL~DF  512 (705)
                      ||+||.+.|+|.+||..+    .++|.+..+|+..+++||+|||++.      +++|+|||||++|||+..|+++.|+||
T Consensus       285 LVt~fh~kGsL~dyL~~n----tisw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~DlTccIaDF  360 (534)
T KOG3653|consen  285 LVTEFHPKGSLCDYLKAN----TISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDLTCCIADF  360 (534)
T ss_pred             EEeeeccCCcHHHHHHhc----cccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCCcEEeecc
Confidence            999999999999999753    6999999999999999999999764      678999999999999999999999999


Q ss_pred             ccceecCCCCcce-eeeeeccccCCCccccccCC------CCccccEEEEehhHHHHhhCCCCCCC--------------
Q 005257          513 GLARMHGHGQVAS-TTRVVGTVGYLAPEVFSSGR------ASTQTDVFGFGILILEVLSGRRPIEE--------------  571 (705)
Q Consensus       513 Gla~~~~~~~~~~-~~~~~gt~~y~APE~~~~~~------~s~ksDVwS~Gvvl~ElltG~~Pf~~--------------  571 (705)
                      |||..+..+.... ....+||.+|||||++.+.-      .-.+.||||+|.|||||+++-.-+..              
T Consensus       361 GLAl~~~p~~~~~d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC~~~~~~~vp~Yqlpfe~ev  440 (534)
T KOG3653|consen  361 GLALRLEPGKPQGDTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRCTDADPGPVPEYQLPFEAEV  440 (534)
T ss_pred             ceeEEecCCCCCcchhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCcccCchhHHh
Confidence            9999887655433 23368999999999997632      23578999999999999985332211              


Q ss_pred             CCccHHHHHHHHHHhCchhHHHHHhhhcCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHhccc
Q 005257          572 GKPNLVEMVWELMVQGKLLDALDARLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLEGKIE  641 (705)
Q Consensus       572 ~~~~~~~~v~~~~~~~~~~~~id~~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~  641 (705)
                      +.....+.++..+...+....+.....     ....+..+.+.+..||..||+.|-|+.=+.+.+..+..
T Consensus       441 G~hPt~e~mq~~VV~kK~RP~~p~~W~-----~h~~~~~l~et~EeCWDhDaeARLTA~Cv~eR~~~l~~  505 (534)
T KOG3653|consen  441 GNHPTLEEMQELVVRKKQRPKIPDAWR-----KHAGMAVLCETIEECWDHDAEARLTAGCVEERMAELMM  505 (534)
T ss_pred             cCCCCHHHHHHHHHhhccCCCChhhhh-----cCccHHHHHHHHHHHcCCchhhhhhhHHHHHHHHHHhc
Confidence            111223444444333222211111111     12346778999999999999999999999888876654

>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=1.3e-40  Score=345.21  Aligned_cols=250  Identities=26%  Similarity=0.397  Sum_probs=212.4

Q ss_pred             CCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCC-chhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEEEEe
Q 005257          364 KGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHEN-DGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYD  442 (705)
Q Consensus       364 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~-~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~lV~E  442 (705)
                      ..|...++||+|.||.||||.+..+++.||+|++..+. ....+++.+|+.+|..++++||.+++|.+.. +..++++||
T Consensus        13 ~~~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~~deIediqqei~~Ls~~~~~~it~yygsyl~-g~~LwiiMe   91 (467)
T KOG0201|consen   13 LLYTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEAEDEIEDIQQEISVLSQCDSPNITEYYGSYLK-GTKLWIIME   91 (467)
T ss_pred             cccccchhccccccceeeeeeeccccceEEEEEechhhcchhhHHHHHHHHHHHhcCcchHHhhhhheee-cccHHHHHH
Confidence            35667789999999999999999999999999998763 4456788999999999999999999998776 778999999


Q ss_pred             eCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecCCCC
Q 005257          443 YMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQ  522 (705)
Q Consensus       443 ~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~~~~  522 (705)
                      ||.+|++.+.|....   .+.+..+.-|++++..||.|||.   .+.+|||||+.|||+..+|.+||+|||++-......
T Consensus        92 y~~gGsv~~lL~~~~---~~~E~~i~~ilre~l~~l~ylH~---~~kiHrDIKaanil~s~~g~vkl~DfgVa~ql~~~~  165 (467)
T KOG0201|consen   92 YCGGGSVLDLLKSGN---ILDEFEIAVILREVLKGLDYLHS---EKKIHRDIKAANILLSESGDVKLADFGVAGQLTNTV  165 (467)
T ss_pred             HhcCcchhhhhccCC---CCccceeeeehHHHHHHhhhhhh---cceecccccccceeEeccCcEEEEecceeeeeechh
Confidence            999999999996433   45888888899999999999998   999999999999999999999999999998776655


Q ss_pred             cceeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhHHHHHhhhcCCC
Q 005257          523 VASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRAKGG  602 (705)
Q Consensus       523 ~~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~l~~~~~  602 (705)
                      ... ..++||+.|||||++....|+.|+||||||++.+||++|.+|+..-.+.            +++-.+.+...  +.
T Consensus       166 ~rr-~tfvGTPfwMAPEVI~~~~Y~~KADIWSLGITaiEla~GePP~s~~hPm------------rvlflIpk~~P--P~  230 (467)
T KOG0201|consen  166 KRR-KTFVGTPFWMAPEVIKQSGYDTKADIWSLGITAIELAKGEPPHSKLHPM------------RVLFLIPKSAP--PR  230 (467)
T ss_pred             hcc-ccccccccccchhhhccccccchhhhhhhhHHHHHHhcCCCCCcccCcc------------eEEEeccCCCC--Cc
Confidence            444 5589999999999999889999999999999999999999999865541            11122222211  22


Q ss_pred             CCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 005257          603 FDEDEVERVLHLGLLCAYPDPRARPTMRQVVKV  635 (705)
Q Consensus       603 ~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  635 (705)
                      ........+.+++..|++.||+.||++.+++++
T Consensus       231 L~~~~S~~~kEFV~~CL~k~P~~RpsA~~LLKh  263 (467)
T KOG0201|consen  231 LDGDFSPPFKEFVEACLDKNPEFRPSAKELLKH  263 (467)
T ss_pred             cccccCHHHHHHHHHHhhcCcccCcCHHHHhhh
Confidence            333556678999999999999999999999884

>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5

Probab=100.00  E-value=9.1e-39  Score=335.74  Aligned_cols=264  Identities=23%  Similarity=0.274  Sum_probs=203.8

Q ss_pred             CCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCC--chhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEEEE
Q 005257          364 KGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHEN--DGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVY  441 (705)
Q Consensus       364 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~--~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~lV~  441 (705)
                      ++|...+.||+|+||.||+|+++.+++.||+|++....  ....+.+.+|+++++.++||||+++++++.. ++..++||
T Consensus         1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-~~~~~lv~   79 (287)
T cd07848           1 NKFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENIVELKEAFRR-RGKLYLVF   79 (287)
T ss_pred             CCceEEEEecccCCEEEEEEEECCCCcEEEEEEEecccccccchhhHHHHHHHHHhCCCccccchhhhEec-CCEEEEEE
Confidence            46888999999999999999999999999999987542  3345678899999999999999999998876 67899999


Q ss_pred             eeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecCCC
Q 005257          442 DYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHG  521 (705)
Q Consensus       442 E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~~~  521 (705)
                      ||++++.+..+... .  ..+++..+..++.|++.||.|||+   .+++||||||+||+++.++.+||+|||+++.....
T Consensus        80 e~~~~~~l~~~~~~-~--~~~~~~~~~~~~~qi~~~L~~lH~---~~i~H~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~  153 (287)
T cd07848          80 EYVEKNMLELLEEM-P--NGVPPEKVRSYIYQLIKAIHWCHK---NDIVHRDIKPENLLISHNDVLKLCDFGFARNLSEG  153 (287)
T ss_pred             ecCCCCHHHHHHhc-C--CCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEEcCCCcEEEeeccCccccccc
Confidence            99998777655432 2  258999999999999999999998   99999999999999999999999999999876543


Q ss_pred             CcceeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhHHHHHhh----
Q 005257          522 QVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDARL----  597 (705)
Q Consensus       522 ~~~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~l----  597 (705)
                      .........|++.|+|||++.+..++.++|||||||++|||++|+.||...... ..........+.+........    
T Consensus       154 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~pf~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~  232 (287)
T cd07848         154 SNANYTEYVATRWYRSPELLLGAPYGKAVDMWSVGCILGELSDGQPLFPGESEI-DQLFTIQKVLGPLPAEQMKLFYSNP  232 (287)
T ss_pred             ccccccccccccccCCcHHHcCCCCCCchhHHhHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHhhCCCCHHHHHhhhccc
Confidence            333333457899999999998888999999999999999999999999764321 111000001111111000000    


Q ss_pred             -------hcC-------CCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 005257          598 -------RAK-------GGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKV  635 (705)
Q Consensus       598 -------~~~-------~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  635 (705)
                             ...       ..+.......+.+++..|++.||++|||++|++++
T Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~~~~l~h  284 (287)
T cd07848         233 RFHGLRFPAVNHPQSLERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQCLNH  284 (287)
T ss_pred             hhcccccCcccCcccHHHhhhcccCHHHHHHHHHHccCCcccCCCHHHHhcC
Confidence                   000       00001123568999999999999999999998863

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes

>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=2.5e-39  Score=341.47  Aligned_cols=246  Identities=25%  Similarity=0.297  Sum_probs=203.9

Q ss_pred             CCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCC---chhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEEE
Q 005257          364 KGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHEN---DGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLV  440 (705)
Q Consensus       364 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~---~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~lV  440 (705)
                      ++|+..+.||+|+||.||+|....+++.||+|++....   ....+.+.+|++++++++||||+++++++.+ +..+++|
T Consensus         1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~~lv   79 (291)
T cd05612           1 DDLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEHD-QRFLYML   79 (291)
T ss_pred             CCceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhhcc-CCeEEEE
Confidence            36888999999999999999999889999999986432   2345668899999999999999999998775 6789999


Q ss_pred             EeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecCC
Q 005257          441 YDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGH  520 (705)
Q Consensus       441 ~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~~  520 (705)
                      |||+++|+|.+++....   .+++..+..++.|++.||+|||+   ++|+||||||+|||++.++.+||+|||+++....
T Consensus        80 ~e~~~~~~L~~~~~~~~---~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~NIli~~~~~~kl~Dfg~~~~~~~  153 (291)
T cd05612          80 MEYVPGGELFSYLRNSG---RFSNSTGLFYASEIVCALEYLHS---KEIVYRDLKPENILLDKEGHIKLTDFGFAKKLRD  153 (291)
T ss_pred             EeCCCCCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHH---CCeeecCCCHHHeEECCCCCEEEEecCcchhccC
Confidence            99999999999997543   68999999999999999999998   9999999999999999999999999999986543


Q ss_pred             CCcceeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhHHHHHhhhcC
Q 005257          521 GQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRAK  600 (705)
Q Consensus       521 ~~~~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~l~~~  600 (705)
                      .    .....||+.|+|||++.+..++.++|||||||++|||++|+.||......   ...+.+..+.            
T Consensus       154 ~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~---~~~~~i~~~~------------  214 (291)
T cd05612         154 R----TWTLCGTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVGYPPFFDDNPF---GIYEKILAGK------------  214 (291)
T ss_pred             C----cccccCChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH---HHHHHHHhCC------------
Confidence            2    22357899999999999888999999999999999999999999765421   1122222221            


Q ss_pred             CCCCHHHHHHHHHHHHHcCCCCCCCCCC-----HHHHHHH
Q 005257          601 GGFDEDEVERVLHLGLLCAYPDPRARPT-----MRQVVKV  635 (705)
Q Consensus       601 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPs-----~~evl~~  635 (705)
                      ..++......+.+++..||+.||.+||+     +.+++++
T Consensus       215 ~~~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h  254 (291)
T cd05612         215 LEFPRHLDLYAKDLIKKLLVVDRTRRLGNMKNGADDVKNH  254 (291)
T ss_pred             cCCCccCCHHHHHHHHHHcCCCHHHccCCccCCHHHHhcC
Confidence            1222233456789999999999999995     7777754

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt

>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]

Probab=100.00  E-value=2.6e-39  Score=319.87  Aligned_cols=237  Identities=26%  Similarity=0.363  Sum_probs=203.3

Q ss_pred             CCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCC---chhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEEE
Q 005257          364 KGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHEN---DGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLV  440 (705)
Q Consensus       364 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~---~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~lV  440 (705)
                      ++|+..+.||.|+||+|.+++.+.++..+|+|++++..   ..+.+...+|..+|+.+.||.++++.+-|.+ ...+++|
T Consensus        44 ~dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~~d-~~~lymv  122 (355)
T KOG0616|consen   44 QDFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFKD-NSNLYMV  122 (355)
T ss_pred             hhhhheeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEeecc-CCeEEEE
Confidence            35677889999999999999999999999999997653   3455678899999999999999999998876 7789999


Q ss_pred             EeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecCC
Q 005257          441 YDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGH  520 (705)
Q Consensus       441 ~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~~  520 (705)
                      |||.+||.|..+|++.+   ++++...+-++.||+.||+|||+   ..|++|||||+|||||.+|.+||.|||.|+....
T Consensus       123 meyv~GGElFS~Lrk~~---rF~e~~arFYAAeivlAleylH~---~~iiYRDLKPENiLlD~~G~iKitDFGFAK~v~~  196 (355)
T KOG0616|consen  123 MEYVPGGELFSYLRKSG---RFSEPHARFYAAEIVLALEYLHS---LDIIYRDLKPENLLLDQNGHIKITDFGFAKRVSG  196 (355)
T ss_pred             EeccCCccHHHHHHhcC---CCCchhHHHHHHHHHHHHHHHHh---cCeeeccCChHHeeeccCCcEEEEeccceEEecC
Confidence            99999999999998755   79999999999999999999999   9999999999999999999999999999987654


Q ss_pred             CCcceeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhHHHHHhhhcC
Q 005257          521 GQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRAK  600 (705)
Q Consensus       521 ~~~~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~l~~~  600 (705)
                      .    +-..+|||.|+|||++....+..++|.|||||++|||+.|..||....+   ....+.+.++++           
T Consensus       197 r----T~TlCGTPeYLAPEii~sk~ynkavDWWalGVLIYEMlaG~pPF~~~~~---~~iY~KI~~~~v-----------  258 (355)
T KOG0616|consen  197 R----TWTLCGTPEYLAPEIIQSKGYNKAVDWWALGVLIYEMLAGYPPFYDDNP---IQIYEKILEGKV-----------  258 (355)
T ss_pred             c----EEEecCCccccChHHhhcCCCCcchhHHHHHHHHHHHHcCCCCCcCCCh---HHHHHHHHhCcc-----------
Confidence            2    5568999999999999999999999999999999999999999987654   233444444432           


Q ss_pred             CCCCHHHHHHHHHHHHHcCCCCCCCC
Q 005257          601 GGFDEDEVERVLHLGLLCAYPDPRAR  626 (705)
Q Consensus       601 ~~~~~~~~~~l~~l~~~Cl~~dP~~R  626 (705)
                       .++......+.+|+...++.|-.+|
T Consensus       259 -~fP~~fs~~~kdLl~~LL~vD~t~R  283 (355)
T KOG0616|consen  259 -KFPSYFSSDAKDLLKKLLQVDLTKR  283 (355)
T ss_pred             -cCCcccCHHHHHHHHHHHhhhhHhh
Confidence             3444444556777777777777777

>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=2.3e-39  Score=349.32  Aligned_cols=246  Identities=24%  Similarity=0.389  Sum_probs=212.0

Q ss_pred             CCcceEEeecCceEEEEEEEcCCCeEEEEEEeccC---CchhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEEEEe
Q 005257          366 FSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHE---NDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYD  442 (705)
Q Consensus       366 f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~---~~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~lV~E  442 (705)
                      |...+.||.|+-|.|..|++..+|+.+|||++.+.   .......+.+||-+|+-|.|||++++++++.. +.++|+|.|
T Consensus        14 wkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydVwe~-~~~lylvlE   92 (786)
T KOG0588|consen   14 WKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDVWEN-KQHLYLVLE   92 (786)
T ss_pred             eeccccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeeeecc-CceEEEEEE
Confidence            55678899999999999999999999999999766   23345668899999999999999999998775 779999999


Q ss_pred             eCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecCCCC
Q 005257          443 YMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQ  522 (705)
Q Consensus       443 ~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~~~~  522 (705)
                      |+++|.|.++|...+   ++++.+..+++.||+.|+.|||.   .+|+||||||+|+|||..+++||+|||+|.+..++.
T Consensus        93 yv~gGELFdylv~kG---~l~e~eaa~ff~QIi~gv~yCH~---~~icHRDLKpENlLLd~~~nIKIADFGMAsLe~~gk  166 (786)
T KOG0588|consen   93 YVPGGELFDYLVRKG---PLPEREAAHFFRQILDGVSYCHA---FNICHRDLKPENLLLDVKNNIKIADFGMASLEVPGK  166 (786)
T ss_pred             ecCCchhHHHHHhhC---CCCCHHHHHHHHHHHHHHHHHhh---hcceeccCCchhhhhhcccCEeeeccceeecccCCc
Confidence            999999999997654   69999999999999999999998   999999999999999999999999999998876655


Q ss_pred             cceeeeeeccccCCCccccccCCC-CccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhHHHHHhhhcCC
Q 005257          523 VASTTRVVGTVGYLAPEVFSSGRA-STQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRAKG  601 (705)
Q Consensus       523 ~~~~~~~~gt~~y~APE~~~~~~~-s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~l~~~~  601 (705)
                      ...  ..||++.|.|||++.+.+| ..++||||+|||||.|++|+.||+++.-   ..+..+++.|.+            
T Consensus       167 lLe--TSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFdDdNi---r~LLlKV~~G~f------------  229 (786)
T KOG0588|consen  167 LLE--TSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFDDDNI---RVLLLKVQRGVF------------  229 (786)
T ss_pred             ccc--ccCCCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCCCCccH---HHHHHHHHcCcc------------
Confidence            443  3599999999999999887 6899999999999999999999986542   333444444432            


Q ss_pred             CCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 005257          602 GFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKV  635 (705)
Q Consensus       602 ~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  635 (705)
                      +.+.....+..+|+..++..||+.|-|++||+++
T Consensus       230 ~MPs~Is~eaQdLLr~ml~VDp~~RiT~~eI~kH  263 (786)
T KOG0588|consen  230 EMPSNISSEAQDLLRRMLDVDPSTRITTEEILKH  263 (786)
T ss_pred             cCCCcCCHHHHHHHHHHhccCccccccHHHHhhC
Confidence            2334445667889999999999999999999985

>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=6.4e-39  Score=341.81  Aligned_cols=243  Identities=23%  Similarity=0.296  Sum_probs=197.5

Q ss_pred             EeecCceEEEEEEEcCCCeEEEEEEeccC---CchhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEEEEeeCCCCC
Q 005257          372 IGVGGNGKVYKGVLEGGGAEIAVKRISHE---NDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGS  448 (705)
Q Consensus       372 LG~G~fg~Vy~~~~~~~~~~vavK~i~~~---~~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~lV~E~~~~gs  448 (705)
                      ||+|+||.||+|.+..+++.||+|++...   .......+.+|+.++.+++||||+++++++.. .+..++||||+++|+
T Consensus         1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-~~~~~lv~e~~~~g~   79 (312)
T cd05585           1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQS-PEKLYLVLAFINGGE   79 (312)
T ss_pred             CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEEec-CCeEEEEEcCCCCCc
Confidence            69999999999999989999999998643   23445678899999999999999999998875 678999999999999


Q ss_pred             hhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecCCCCcceeee
Q 005257          449 LDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTR  528 (705)
Q Consensus       449 L~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~~~~~~~~~~  528 (705)
                      |.+++....   .+++..+..++.|++.||.|||+   ++|+||||||+|||++.++.+||+|||+++...... .....
T Consensus        80 L~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lH~---~~i~HrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~-~~~~~  152 (312)
T cd05585          80 LFHHLQREG---RFDLSRARFYTAELLCALENLHK---FNVIYRDLKPENILLDYQGHIALCDFGLCKLNMKDD-DKTNT  152 (312)
T ss_pred             HHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHh---CCeEeCCCCHHHeEECCCCcEEEEECcccccCccCC-Ccccc
Confidence            999997533   58999999999999999999998   999999999999999999999999999998543222 12234


Q ss_pred             eeccccCCCccccccCCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhHHHHHhhhcCCCCCHHHH
Q 005257          529 VVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRAKGGFDEDEV  608 (705)
Q Consensus       529 ~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~l~~~~~~~~~~~  608 (705)
                      ..||+.|+|||++.+..++.++|||||||++|||++|+.||......   ........+            ...++....
T Consensus       153 ~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~~---~~~~~~~~~------------~~~~~~~~~  217 (312)
T cd05585         153 FCGTPEYLAPELLLGHGYTKAVDWWTLGVLLYEMLTGLPPFYDENVN---EMYRKILQE------------PLRFPDGFD  217 (312)
T ss_pred             ccCCcccCCHHHHcCCCCCCccceechhHHHHHHHhCCCCcCCCCHH---HHHHHHHcC------------CCCCCCcCC
Confidence            57999999999999989999999999999999999999999764321   111111111            122233344


Q ss_pred             HHHHHHHHHcCCCCCCCCCCHHHHHHHHH
Q 005257          609 ERVLHLGLLCAYPDPRARPTMRQVVKVLE  637 (705)
Q Consensus       609 ~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  637 (705)
                      ..+.+++..||+.||++||++..+.+.|+
T Consensus       218 ~~~~~li~~~L~~dp~~R~~~~~~~e~l~  246 (312)
T cd05585         218 RDAKDLLIGLLSRDPTRRLGYNGAQEIKN  246 (312)
T ss_pred             HHHHHHHHHHcCCCHHHcCCCCCHHHHHc
Confidence            56789999999999999986544444443

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl

>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]

Probab=100.00  E-value=1.6e-39  Score=332.32  Aligned_cols=288  Identities=26%  Similarity=0.351  Sum_probs=216.3

Q ss_pred             CCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCCc--hhHHHHHHHHHHhccCCCCC-cceeeeeeeeccC-----c
Q 005257          365 GFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHEND--GGTRAFLAEISSLGRLKHKS-LVGLRGWCKREKG-----S  436 (705)
Q Consensus       365 ~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~--~~~~~~~~Ei~~l~~l~Hpn-iv~l~g~~~~~~~-----~  436 (705)
                      .|...++||+|+||+||+|+.+.+|+.||+|++....+  .....-.+|+.++++|+|+| |+.+++++..+..     .
T Consensus        12 ~~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~~~~~   91 (323)
T KOG0594|consen   12 DYEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHRGIGK   91 (323)
T ss_pred             HHHHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccccCCCchhhHHHHHHHHhCCCcceEEEEeeeeecccccccce
Confidence            35556679999999999999999999999999987644  23455689999999999999 9999999987543     8


Q ss_pred             eEEEEeeCCCCChhHHHHhcCCC-CcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccc
Q 005257          437 LMLVYDYMENGSLDKWIFQCDGS-MMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLA  515 (705)
Q Consensus       437 ~~lV~E~~~~gsL~~~L~~~~~~-~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla  515 (705)
                      +++|+||++. +|.+++...... ..++...+..++.|++.||+|||+   ++|+||||||.|||++++|.+||+|||+|
T Consensus        92 l~lvfe~~d~-DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H~---~~IlHRDLKPQNlLi~~~G~lKlaDFGlA  167 (323)
T KOG0594|consen   92 LYLVFEFLDR-DLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLHS---HGILHRDLKPQNLLISSSGVLKLADFGLA  167 (323)
T ss_pred             EEEEEEeecc-cHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHh---CCeecccCCcceEEECCCCcEeeeccchH
Confidence            8999999965 999999876532 357778999999999999999999   99999999999999999999999999999


Q ss_pred             eecCCCCcceeeeeeccccCCCccccccC-CCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhHHHH
Q 005257          516 RMHGHGQVASTTRVVGTVGYLAPEVFSSG-RASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALD  594 (705)
Q Consensus       516 ~~~~~~~~~~~~~~~gt~~y~APE~~~~~-~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~~id  594 (705)
                      +...-.... .+..++|.+|+|||++.+. .|+...||||+||++.||++++..|.+..+               .+++.
T Consensus       168 ra~~ip~~~-yt~evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~se---------------~~ql~  231 (323)
T KOG0594|consen  168 RAFSIPMRT-YTPEVVTLWYRAPEVLLGSTSYSTSVDIWSLGCIFAEMFTRRPLFPGDSE---------------IDQLF  231 (323)
T ss_pred             HHhcCCccc-ccccEEEeeccCHHHhcCCCcCCCCcchHhHHHHHHHHHhCCCCCCCCcH---------------HHHHH
Confidence            977644433 3345789999999999886 699999999999999999999888887653               11122


Q ss_pred             HhhhcCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHhccccCCCCCcchhhHHHHHHhhcccccccccccccc
Q 005257          595 ARLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLEGKIEAGIENETEDMDAYLLQQVKSKDMWANYSRSFGY  674 (705)
Q Consensus       595 ~~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~  674 (705)
                      ...+..+..+.+.++.+..+...=.  ...+++..+.+...+...            .....+.+..+..+++..|.+++
T Consensus       232 ~If~~lGtP~e~~Wp~v~~~~~~k~--~f~~~~~~~~l~~~~~~~------------~~~~~dll~~~L~y~p~~R~Sa~  297 (323)
T KOG0594|consen  232 RIFRLLGTPNEKDWPGVSSLPDYKA--PFPKWPGPKDLSSILPKL------------DPDGIELLSKLLQYDPAKRISAK  297 (323)
T ss_pred             HHHHHcCCCCccCCCCccccccccc--cCcCCCCccchHHhcccc------------CccHHHHHHHHhccCcccCcCHH
Confidence            2222112223222222222221111  111222233333333211            12344566667779999999999


Q ss_pred             CCCCCCCccccc
Q 005257          675 GYATHPTFHDIR  686 (705)
Q Consensus       675 ~~~~hp~f~~~~  686 (705)
                      .++.||||.+..
T Consensus       298 ~al~h~yf~~~~  309 (323)
T KOG0594|consen  298 GALTHPYFSELP  309 (323)
T ss_pred             HHhcChhhcccc
Confidence            999999998875

>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

Probab=100.00  E-value=1.6e-38  Score=341.13  Aligned_cols=243  Identities=25%  Similarity=0.353  Sum_probs=199.2

Q ss_pred             eEEeecCceEEEEEEEcCCCeEEEEEEeccC---CchhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEEEEeeCCC
Q 005257          370 NVIGVGGNGKVYKGVLEGGGAEIAVKRISHE---NDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMEN  446 (705)
Q Consensus       370 ~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~---~~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~lV~E~~~~  446 (705)
                      +.||+|+||.||++....+++.||+|++...   .......+.+|+++++.++||||+++++++.. ++.+++||||+++
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~~lv~Ey~~~   79 (328)
T cd05593           1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQT-KDRLCFVMEYVNG   79 (328)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEc-CCEEEEEEeCCCC
Confidence            4699999999999999999999999999754   23345678899999999999999999998875 6789999999999


Q ss_pred             CChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecCCCCccee
Q 005257          447 GSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVAST  526 (705)
Q Consensus       447 gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~~~~~~~~  526 (705)
                      |+|..++....   .+++.++..++.||+.||.|||+   ++|+||||||+|||++.++.+||+|||+++...... ...
T Consensus        80 g~L~~~l~~~~---~l~~~~~~~~~~qi~~aL~~LH~---~~ivHrDikp~NIll~~~~~~kL~DfG~~~~~~~~~-~~~  152 (328)
T cd05593          80 GELFFHLSRER---VFSEDRTRFYGAEIVSALDYLHS---GKIVYRDLKLENLMLDKDGHIKITDFGLCKEGITDA-ATM  152 (328)
T ss_pred             CCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHh---CCeEecccCHHHeEECCCCcEEEecCcCCccCCCcc-ccc
Confidence            99998886533   68999999999999999999998   999999999999999999999999999987543221 122


Q ss_pred             eeeeccccCCCccccccCCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhHHHHHhhhcCCCCCHH
Q 005257          527 TRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRAKGGFDED  606 (705)
Q Consensus       527 ~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~l~~~~~~~~~  606 (705)
                      ....||+.|+|||++.+..++.++|||||||++|||++|+.||......   .....+..+.            ..++..
T Consensus       153 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~Pf~~~~~~---~~~~~~~~~~------------~~~p~~  217 (328)
T cd05593         153 KTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE---KLFELILMED------------IKFPRT  217 (328)
T ss_pred             ccccCCcCccChhhhcCCCCCccCCccccchHHHHHhhCCCCCCCCCHH---HHHHHhccCC------------ccCCCC
Confidence            3357999999999999889999999999999999999999999764321   1111111111            112223


Q ss_pred             HHHHHHHHHHHcCCCCCCCCC-----CHHHHHHH
Q 005257          607 EVERVLHLGLLCAYPDPRARP-----TMRQVVKV  635 (705)
Q Consensus       607 ~~~~l~~l~~~Cl~~dP~~RP-----s~~evl~~  635 (705)
                      ....+.+++..||+.||++||     ++.+++++
T Consensus       218 ~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h  251 (328)
T cd05593         218 LSADAKSLLSGLLIKDPNKRLGGGPDDAKEIMRH  251 (328)
T ss_pred             CCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHhcC
Confidence            345678899999999999997     88988864

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate

>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

Probab=100.00  E-value=1.1e-38  Score=330.92  Aligned_cols=256  Identities=25%  Similarity=0.449  Sum_probs=209.1

Q ss_pred             CCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCCchhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEEEEee
Q 005257          364 KGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDY  443 (705)
Q Consensus       364 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~lV~E~  443 (705)
                      .+|...+.||+|++|.||+|.....++.||+|++... ....+++.+|++++++++||||++++++|.. ++..++||||
T Consensus         6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~lv~e~   83 (263)
T cd05052           6 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR-EPPFYIITEF   83 (263)
T ss_pred             HHeEEeeecCCcccceEEEEEEecCCceEEEEEecCC-chHHHHHHHHHHHHHhCCCCChhheEEEEcC-CCCcEEEEEe
Confidence            3477788999999999999999988999999998643 3345778999999999999999999998876 6688999999


Q ss_pred             CCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecCCCCc
Q 005257          444 MENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQV  523 (705)
Q Consensus       444 ~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~~~~~  523 (705)
                      +++++|.+++..... ..+++..++.++.|++.||+|||+   .+++||||||+||++++++.+||+|||+++.......
T Consensus        84 ~~~~~L~~~~~~~~~-~~l~~~~~~~~~~ql~~~l~~lH~---~~i~H~dlkp~nil~~~~~~~kl~df~~~~~~~~~~~  159 (263)
T cd05052          84 MTYGNLLDYLRECNR-QEVNAVVLLYMATQISSAMEYLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTY  159 (263)
T ss_pred             CCCCcHHHHHHhCCC-CCCCHHHHHHHHHHHHHHHHHHHh---CCEeecccCcceEEEcCCCcEEeCCCcccccccccee
Confidence            999999999976443 368999999999999999999998   9999999999999999999999999999987654332


Q ss_pred             ceeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhh-CCCCCCCCCccHHHHHHHHHHhCchhHHHHHhhhcCCC
Q 005257          524 ASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLS-GRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRAKGG  602 (705)
Q Consensus       524 ~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~Ellt-G~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~l~~~~~  602 (705)
                      .......++..|+|||.+.+..++.++|||||||++|||++ |..||.....   +..+.....+         ..  ..
T Consensus       160 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~---~~~~~~~~~~---------~~--~~  225 (263)
T cd05052         160 TAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDL---SQVYELLEKG---------YR--ME  225 (263)
T ss_pred             eccCCCCCccccCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCH---HHHHHHHHCC---------CC--CC
Confidence            22222234568999999988899999999999999999998 9999875432   1222222211         11  12


Q ss_pred             CCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHhc
Q 005257          603 FDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLEGK  639 (705)
Q Consensus       603 ~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~  639 (705)
                      .+......+.+++.+||+.+|++||++.++++.|+..
T Consensus       226 ~~~~~~~~~~~li~~cl~~~p~~Rp~~~~l~~~l~~~  262 (263)
T cd05052         226 RPEGCPPKVYELMRACWQWNPSDRPSFAEIHQAFETM  262 (263)
T ss_pred             CCCCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHhh
Confidence            2233456788999999999999999999999999854

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays

>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

Probab=100.00  E-value=1.1e-38  Score=341.80  Aligned_cols=243  Identities=24%  Similarity=0.343  Sum_probs=198.7

Q ss_pred             eEEeecCceEEEEEEEcCCCeEEEEEEeccC---CchhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEEEEeeCCC
Q 005257          370 NVIGVGGNGKVYKGVLEGGGAEIAVKRISHE---NDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMEN  446 (705)
Q Consensus       370 ~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~---~~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~lV~E~~~~  446 (705)
                      +.||+|+||.||++....++..||+|+++..   .......+.+|+++++.++||||+++++.+.. .+.+++||||+++
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~-~~~~~lv~E~~~~   79 (323)
T cd05595           1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQT-HDRLCFVMEYANG   79 (323)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEEec-CCEEEEEEeCCCC
Confidence            4699999999999999989999999998754   23345667889999999999999999998876 6789999999999


Q ss_pred             CChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecCCCCccee
Q 005257          447 GSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVAST  526 (705)
Q Consensus       447 gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~~~~~~~~  526 (705)
                      |+|..++....   .+++..+..++.||+.||.|||+   ++|+||||||+|||++.++.+||+|||+++....... ..
T Consensus        80 ~~L~~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~-~~  152 (323)
T cd05595          80 GELFFHLSRER---VFTEERARFYGAEIVSALEYLHS---RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGA-TM  152 (323)
T ss_pred             CcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHH---CCeEecCCCHHHEEEcCCCCEEecccHHhccccCCCC-cc
Confidence            99998886543   68999999999999999999998   9999999999999999999999999999875322221 22


Q ss_pred             eeeeccccCCCccccccCCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhHHHHHhhhcCCCCCHH
Q 005257          527 TRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRAKGGFDED  606 (705)
Q Consensus       527 ~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~l~~~~~~~~~  606 (705)
                      ....||+.|+|||++.+..++.++|||||||++|||++|+.||......   .....+..+.            ..++..
T Consensus       153 ~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~---~~~~~~~~~~------------~~~p~~  217 (323)
T cd05595         153 KTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE---RLFELILMEE------------IRFPRT  217 (323)
T ss_pred             ccccCCcCcCCcccccCCCCCchhchhhhHHHHHHHHhCCCCCCCCCHH---HHHHHHhcCC------------CCCCCC
Confidence            2357899999999999889999999999999999999999999764421   1111111111            112233


Q ss_pred             HHHHHHHHHHHcCCCCCCCCC-----CHHHHHHH
Q 005257          607 EVERVLHLGLLCAYPDPRARP-----TMRQVVKV  635 (705)
Q Consensus       607 ~~~~l~~l~~~Cl~~dP~~RP-----s~~evl~~  635 (705)
                      ....+.+++..||+.||++||     ++.+++++
T Consensus       218 ~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~l~h  251 (323)
T cd05595         218 LSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEH  251 (323)
T ss_pred             CCHHHHHHHHHHccCCHHHhCCCCCCCHHHHHcC
Confidence            345678999999999999998     88888764

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in

>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=1.5e-38  Score=341.95  Aligned_cols=254  Identities=25%  Similarity=0.322  Sum_probs=205.3

Q ss_pred             CCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCC---chhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEEE
Q 005257          364 KGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHEN---DGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLV  440 (705)
Q Consensus       364 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~---~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~lV  440 (705)
                      ++|...+.||+|+||.||+|.+..+++.||||+++...   ....+.+.+|++++..++||||+++++++.. .+..++|
T Consensus         1 ~~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~-~~~~~lv   79 (333)
T cd05600           1 KDFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAFQD-DEYLYLA   79 (333)
T ss_pred             CCcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEEEc-CCEEEEE
Confidence            46888999999999999999999889999999987542   2345678899999999999999999998876 6789999


Q ss_pred             EeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecCC
Q 005257          441 YDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGH  520 (705)
Q Consensus       441 ~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~~  520 (705)
                      |||+++|+|.+++....   .+++.++..++.|++.||.|||+   .+|+||||||+|||++.++.+||+|||+++....
T Consensus        80 ~e~~~g~~L~~~l~~~~---~l~~~~~~~~~~qi~~~l~~lH~---~~ivH~dlkp~Nil~~~~~~~kL~Dfg~a~~~~~  153 (333)
T cd05600          80 MEYVPGGDFRTLLNNLG---VLSEDHARFYMAEMFEAVDALHE---LGYIHRDLKPENFLIDASGHIKLTDFGLSKGIVT  153 (333)
T ss_pred             EeCCCCCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHH---CCccccCCCHHHEEECCCCCEEEEeCcCCccccc
Confidence            99999999999996543   68999999999999999999998   9999999999999999999999999999976543


Q ss_pred             CCcceeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhHHHHHhhhcC
Q 005257          521 GQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRAK  600 (705)
Q Consensus       521 ~~~~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~l~~~  600 (705)
                          ......||+.|+|||++.+..++.++|||||||++|||++|+.||......   ..+..+.....  .+.....  
T Consensus       154 ----~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~---~~~~~i~~~~~--~~~~~~~--  222 (333)
T cd05600         154 ----YANSVVGSPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPFSGSTPN---ETWENLKYWKE--TLQRPVY--  222 (333)
T ss_pred             ----ccCCcccCccccChhHhcCCCCCCccceecchHHHhhhhhCCCCCCCCCHH---HHHHHHHhccc--cccCCCC--
Confidence                223357899999999999889999999999999999999999999764421   11111111100  0000000  


Q ss_pred             CCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 005257          601 GGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKV  635 (705)
Q Consensus       601 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  635 (705)
                      ..........+.+++..|+..+|++||++.+++++
T Consensus       223 ~~~~~~~s~~~~~li~~~l~~~~~rr~s~~~ll~h  257 (333)
T cd05600         223 DDPRFNLSDEAWDLITKLINDPSRRFGSLEDIKNH  257 (333)
T ss_pred             CccccccCHHHHHHHHHHhhChhhhcCCHHHHHhC
Confidence            00001234567889999999999999999999875

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.

>cd01951 lectin_L-type legume lectins

Probab=100.00  E-value=5.5e-38  Score=317.69  Aligned_cols=203  Identities=29%  Similarity=0.412  Sum_probs=168.6

Q ss_pred             CCCeEEEcceEee--cCcEEecCCCCCeEEEEEcCCCccccCCCCCcccceEEEEEEEEecCCCCCCCCceEEEEeeCCC
Q 005257           35 SSNLSLYGTATVE--SRILTLTNSTTFTIGRALYPSKIPTKRPNSSYVYPFSTSFIFAMAPYKGVLAGHGLVFLFVPFHG  112 (705)
Q Consensus        35 ~~~~~~~g~a~~~--~~~l~lt~~~~~~~Gr~~y~~pv~l~~~~~~~~~sF~t~F~f~i~~~~~~~~g~G~aF~~~~~~~  112 (705)
                      ..++.++|+|.+.  ++.|+||++..+++|+++|++||++|       ++|+|+|+|.|.+.. ..+||||||+|+|...
T Consensus        13 ~~~~~~~G~A~~~~~~~~l~Lt~~~~~~~G~~~~~~~i~~~-------~~F~~~F~f~i~~~~-~~~gdG~aF~l~~~~~   84 (223)
T cd01951          13 QSNWQLNGSATLTTDSGVLRLTPDTGNQAGSAWYKTPIDLS-------KDFTTTFKFYLGTKG-TNGADGIAFVLQNDPA   84 (223)
T ss_pred             hhhcEEcccEEecCCCCEEEECCCCCCcEEEEEECCcEecc-------CCEEEEEEEEEeCCC-CCCCCcEEEEEecCCC
Confidence            3689999999998  78999999999999999999999998       679999999998865 5689999999999866


Q ss_pred             CCCCCCC--CcccccccCCCCCCCCcEEEEEeecccCCCCCCCCCCeeEEecCCCcccc--cccccccCCCCCCCCCCCC
Q 005257          113 IKGATEA--QHLGLFNRTNDGNSSNHVFGVEFDVFKNQEFNDIDENHVGIDVNSLTSVS--AHAAGYWPDNQTDSSGSNS  188 (705)
Q Consensus       113 ~~~~~~g--~~lGl~~~~~~~~~~~~~vaVEFDt~~n~~~~d~~~~Hvgidvns~~S~~--~~~~~~~~~~~~~~~~~~~  188 (705)
                      .+.+..|  ++||+       ...++.+||||||++|.+++||+.||||||+|+..|..  ..++++..           
T Consensus        85 ~~~~~~g~~~~lG~-------~~~~~~~aVefDT~~N~~~~dp~~~higi~~n~~~~~~~~~~~~~~~~-----------  146 (223)
T cd01951          85 GALGGGGGGGGLGY-------GGIGNSVAVEFDTYKNDDNNDPNGNHISIDVNGNGNNTALATSLGSAS-----------  146 (223)
T ss_pred             CccccCCCCCccCc-------cccCCeEEEEEeccccCCCCCCCCCEEEEEcCCCCCCcccccccceee-----------
Confidence            5555555  78887       35578999999999999888999999999999997641  11111110           


Q ss_pred             CCCCCCCccccceeecCCCcceEEEEEec--CceEEEEEEEccCCCCCCCceeeeecCccccccceeccccccccccccc
Q 005257          189 NSGTGDDEKSFKELKLNNGKNYQVWIDYA--DSFINITMVEAGMKRPKRPLLSVPLNLSGVLEDEMYVGFTAATGQLVES  266 (705)
Q Consensus       189 ~~~~~~~~~~~~~~~l~~g~~~~~~I~Y~--~~~~~v~~~~~~~~~~~~~~ls~~vdl~~~l~~~~~vGfsastg~~~~~  266 (705)
                                 .+....+|+.++|||+|+  .++|.|++.....  |..+.++.++||+..++++||||||||||...+.
T Consensus       147 -----------~~~~~~~g~~~~v~I~Y~~~~~~L~v~l~~~~~--~~~~~l~~~~~l~~~~~~~~yvGFTAsTG~~~~~  213 (223)
T cd01951         147 -----------LPNGTGLGNEHTVRITYDPTTNTLTVYLDNGST--LTSLDITIPVDLIQLGPTKAYFGFTASTGGLTNL  213 (223)
T ss_pred             -----------CCCccCCCCEEEEEEEEeCCCCEEEEEECCCCc--cccccEEEeeeecccCCCcEEEEEEcccCCCcce
Confidence                       011122388999999994  6888888875543  6778999999999999999999999999999999


Q ss_pred             ceeeeeeecc
Q 005257          267 HKILAWSFSN  276 (705)
Q Consensus       267 h~i~~wsf~~  276 (705)
                      |.|++|+|++
T Consensus       214 h~V~~wsf~~  223 (223)
T cd01951         214 HDILNWSFTS  223 (223)
T ss_pred             eEEEEEEecC
Confidence            9999999974

The L-type (legume-type) lectins are a highly diverse family of carbohydrate binding proteins that generally display no enzymatic activity toward the sugars they bind. This family includes arcelin, concanavalinA, the lectin-like receptor kinases, the ERGIC-53/VIP36/EMP46 type1 transmembrane proteins, and an alpha-amylase inhibitor. L-type lectins have a dome-shaped beta-barrel carbohydrate recognition domain with a curved seven-stranded beta-sheet referred to as the "front face" and a flat six-stranded beta-sheet referred to as the "back face". This domain homodimerizes so that adjacent back sheets form a contiguous 12-stranded sheet and homotetramers occur by a back-to-back association of these homodimers. Though L-type lectins exhibit both sequence and structural similarity to one another, their carbohydrate binding specificities differ widely.

>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit

Probab=100.00  E-value=9.8e-39  Score=349.16  Aligned_cols=261  Identities=25%  Similarity=0.401  Sum_probs=205.0

Q ss_pred             HhCCCCcceEEeecCceEEEEEEE-----cCCCeEEEEEEeccCC-chhHHHHHHHHHHhccC-CCCCcceeeeeeeecc
Q 005257          362 ATKGFSEENVIGVGGNGKVYKGVL-----EGGGAEIAVKRISHEN-DGGTRAFLAEISSLGRL-KHKSLVGLRGWCKREK  434 (705)
Q Consensus       362 at~~f~~~~~LG~G~fg~Vy~~~~-----~~~~~~vavK~i~~~~-~~~~~~~~~Ei~~l~~l-~Hpniv~l~g~~~~~~  434 (705)
                      ..++|+..+.||+|+||.||+|+.     .+++..||||+++... ....+.+.+|+.++..+ +||||++++++|.. .
T Consensus        33 ~~~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~~-~  111 (375)
T cd05104          33 PRNRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHINIVNLLGACTV-G  111 (375)
T ss_pred             chHHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcCcHHHHHHHHHHHHHHHhcCCcceeeeeeeecc-C
Confidence            345788899999999999999974     3456789999986543 33456789999999999 89999999999876 6


Q ss_pred             CceEEEEeeCCCCChhHHHHhcCC--------------------------------------------------------
Q 005257          435 GSLMLVYDYMENGSLDKWIFQCDG--------------------------------------------------------  458 (705)
Q Consensus       435 ~~~~lV~E~~~~gsL~~~L~~~~~--------------------------------------------------------  458 (705)
                      +..++||||+++|+|.+++.....                                                        
T Consensus       112 ~~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~  191 (375)
T cd05104         112 GPTLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRRSVRS  191 (375)
T ss_pred             CcceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCccccccccccccccccc
Confidence            688999999999999999865321                                                        


Q ss_pred             ----------------CCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecCCCC
Q 005257          459 ----------------SMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQ  522 (705)
Q Consensus       459 ----------------~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~~~~  522 (705)
                                      ...+++..+++++.||+.||.|||+   ++|+||||||+|||++.++.+||+|||+++......
T Consensus       192 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~---~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~  268 (375)
T cd05104         192 GSYIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLAS---KNCIHRDLAARNILLTHGRITKICDFGLARDIRNDS  268 (375)
T ss_pred             ceecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHH---CCeeccCCchhhEEEECCCcEEEecCccceeccCcc
Confidence                            1247889999999999999999998   999999999999999999999999999998664332


Q ss_pred             cce-eeeeeccccCCCccccccCCCCccccEEEEehhHHHHhh-CCCCCCCCCccHHHHHHHHHHhCchhHHHHHhhhcC
Q 005257          523 VAS-TTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLS-GRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRAK  600 (705)
Q Consensus       523 ~~~-~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~Ellt-G~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~l~~~  600 (705)
                      ... .....++..|+|||++.+..++.++|||||||++|||++ |..||......  ......+..+.         +  
T Consensus       269 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDi~slG~~l~ellt~g~~p~~~~~~~--~~~~~~~~~~~---------~--  335 (375)
T cd05104         269 NYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSSPYPGMPVD--SKFYKMIKEGY---------R--  335 (375)
T ss_pred             cccccCCCCCCcceeChhHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCch--HHHHHHHHhCc---------c--
Confidence            211 111234667999999999899999999999999999998 88888654321  11112222211         1  


Q ss_pred             CCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHhc
Q 005257          601 GGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLEGK  639 (705)
Q Consensus       601 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~  639 (705)
                      ...+......+.+++..||+.||++||++.|+++.|+..
T Consensus       336 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~l~~~  374 (375)
T cd05104         336 MLSPECAPSEMYDIMKSCWDADPLKRPTFKQIVQLIEQQ  374 (375)
T ss_pred             CCCCCCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHhh
Confidence            011112235688999999999999999999999999853

Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce

>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional

Probab=100.00  E-value=2.4e-38  Score=341.44  Aligned_cols=246  Identities=23%  Similarity=0.328  Sum_probs=202.7

Q ss_pred             CCCCcceEEeecCceEEEEEEEcCCC-eEEEEEEeccC---CchhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEE
Q 005257          364 KGFSEENVIGVGGNGKVYKGVLEGGG-AEIAVKRISHE---NDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLML  439 (705)
Q Consensus       364 ~~f~~~~~LG~G~fg~Vy~~~~~~~~-~~vavK~i~~~---~~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~l  439 (705)
                      ++|...+.||+|+||.||+|.+..++ ..||+|++...   .....+.+.+|+.++..++||||+++++++.. .+.+++
T Consensus        30 ~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~-~~~~~l  108 (340)
T PTZ00426         30 EDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSFKD-ESYLYL  108 (340)
T ss_pred             hhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEEEe-CCEEEE
Confidence            46888999999999999999876554 68999998643   23345678899999999999999999998876 678999


Q ss_pred             EEeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecC
Q 005257          440 VYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHG  519 (705)
Q Consensus       440 V~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~  519 (705)
                      ||||+++|+|.+++....   .+++..+..++.|++.||.|||+   .+|+||||||+|||++.++.+||+|||+++...
T Consensus       109 v~Ey~~~g~L~~~i~~~~---~~~~~~~~~~~~qi~~aL~~LH~---~~ivHrDLkp~NILl~~~~~ikL~DFG~a~~~~  182 (340)
T PTZ00426        109 VLEFVIGGEFFTFLRRNK---RFPNDVGCFYAAQIVLIFEYLQS---LNIVYRDLKPENLLLDKDGFIKMTDFGFAKVVD  182 (340)
T ss_pred             EEeCCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHH---CCeEccCCCHHHEEECCCCCEEEecCCCCeecC
Confidence            999999999999997543   68999999999999999999998   999999999999999999999999999998754


Q ss_pred             CCCcceeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhHHHHHhhhc
Q 005257          520 HGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRA  599 (705)
Q Consensus       520 ~~~~~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~l~~  599 (705)
                      ..    .....||+.|||||++.+..++.++|||||||++|||++|+.||....+.   .....+..+.           
T Consensus       183 ~~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~---~~~~~i~~~~-----------  244 (340)
T PTZ00426        183 TR----TYTLCGTPEYIAPEILLNVGHGKAADWWTLGIFIYEILVGCPPFYANEPL---LIYQKILEGI-----------  244 (340)
T ss_pred             CC----cceecCChhhcCHHHHhCCCCCccccccchhhHHHHHhcCCCCCCCCCHH---HHHHHHhcCC-----------
Confidence            32    23357999999999999888999999999999999999999999865431   1122222221           


Q ss_pred             CCCCCHHHHHHHHHHHHHcCCCCCCCCC-----CHHHHHHH
Q 005257          600 KGGFDEDEVERVLHLGLLCAYPDPRARP-----TMRQVVKV  635 (705)
Q Consensus       600 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RP-----s~~evl~~  635 (705)
                       ..++......+.+++..|++.||++|+     ++++++++
T Consensus       245 -~~~p~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~h  284 (340)
T PTZ00426        245 -IYFPKFLDNNCKHLMKKLLSHDLTKRYGNLKKGAQNVKEH  284 (340)
T ss_pred             -CCCCCCCCHHHHHHHHHHcccCHHHcCCCCCCCHHHHHcC
Confidence             112222334578899999999999995     88888764

>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

Probab=100.00  E-value=3.4e-38  Score=339.13  Aligned_cols=265  Identities=24%  Similarity=0.365  Sum_probs=207.4

Q ss_pred             hCCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCCc-hhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEEEE
Q 005257          363 TKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHEND-GGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVY  441 (705)
Q Consensus       363 t~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~-~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~lV~  441 (705)
                      .++|+..+.||+|+||.||++.+..++..+|+|.+..... ...+.+.+|++++++++||||+++++++.. ++..++||
T Consensus         4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-~~~~~lv~   82 (331)
T cd06649           4 DDDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYS-DGEISICM   82 (331)
T ss_pred             cccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEE-CCEEEEEe
Confidence            4678899999999999999999999999999999876533 345679999999999999999999998876 67899999


Q ss_pred             eeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecCCC
Q 005257          442 DYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHG  521 (705)
Q Consensus       442 E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~~~  521 (705)
                      ||+++|+|.+++....   .+++..+..++.|++.||.|||+  ..+|+||||||+|||++.++.+||+|||++......
T Consensus        83 e~~~~~~L~~~l~~~~---~~~~~~~~~~~~~i~~~l~~lH~--~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~  157 (331)
T cd06649          83 EHMDGGSLDQVLKEAK---RIPEEILGKVSIAVLRGLAYLRE--KHQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS  157 (331)
T ss_pred             ecCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHhh--cCCEEcCCCChhhEEEcCCCcEEEccCccccccccc
Confidence            9999999999997543   58999999999999999999997  246999999999999999999999999999765432


Q ss_pred             CcceeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHH-HHHhC-------------
Q 005257          522 QVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWE-LMVQG-------------  587 (705)
Q Consensus       522 ~~~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~-~~~~~-------------  587 (705)
                      .   .....||+.|+|||++.+..++.++|||||||++|||++|+.||............. ....+             
T Consensus       158 ~---~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (331)
T cd06649         158 M---ANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAIGRYPIPPPDAKELEAIFGRPVVDGEEGEPHSISPRPR  234 (331)
T ss_pred             c---cccCCCCcCcCCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccccCCccccCcccc
Confidence            2   223468999999999998889999999999999999999999997543211111000 00000             


Q ss_pred             -----------------chhHHHHHhhhcC--CCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Q 005257          588 -----------------KLLDALDARLRAK--GGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVL  636 (705)
Q Consensus       588 -----------------~~~~~id~~l~~~--~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L  636 (705)
                                       ...+..+......  ..........+.+++.+||+.||++|||+.+++++.
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~~P~~Rpt~~ell~h~  302 (331)
T cd06649         235 PPGRPVSGHGMDSRPAMAIFELLDYIVNEPPPKLPNGVFTPDFQEFVNKCLIKNPAERADLKMLMNHT  302 (331)
T ss_pred             cccccccccccccccchhHHHHHHHHHhCCCcCCCCccccHHHHHHHHHHccCCcccCCCHHHHhcCh
Confidence                             0001111110000  000112345789999999999999999999998864

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst

>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity

Probab=100.00  E-value=9.8e-39  Score=331.09  Aligned_cols=250  Identities=30%  Similarity=0.525  Sum_probs=197.0

Q ss_pred             cceEEeecCceEEEEEEEc----CCCeEEEEEEeccCCc-hhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEEEEe
Q 005257          368 EENVIGVGGNGKVYKGVLE----GGGAEIAVKRISHEND-GGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYD  442 (705)
Q Consensus       368 ~~~~LG~G~fg~Vy~~~~~----~~~~~vavK~i~~~~~-~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~lV~E  442 (705)
                      ..+.||.|.||.||+|.+.    ..+..|+||.++.... ...+.|.+|++.+++++||||++++|+|.. .+..++|+|
T Consensus         3 ~~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~-~~~~~lv~e   81 (259)
T PF07714_consen    3 LIKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSSSEEEEEEFLNEIQILRKLRHPNIVKLYGFCIE-NEPLFLVME   81 (259)
T ss_dssp             EEEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEES-SSSEEEEEE
T ss_pred             EeeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccccccccceeeeecccccccccccccccccccccc-ccccccccc
Confidence            3578999999999999998    3457899999965433 347889999999999999999999999985 667999999


Q ss_pred             eCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecCCCC
Q 005257          443 YMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQ  522 (705)
Q Consensus       443 ~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~~~~  522 (705)
                      |+++|+|.++|..... ..+++.++.+|+.|++.||.|||+   .+++|+||+++||++++++.+||+|||+++......
T Consensus        82 ~~~~g~L~~~L~~~~~-~~~~~~~~~~i~~~i~~~l~~Lh~---~~iiH~~l~~~nill~~~~~~Kl~~f~~~~~~~~~~  157 (259)
T PF07714_consen   82 YCPGGSLDDYLKSKNK-EPLSEQQRLSIAIQIAEALSYLHS---NNIIHGNLSPSNILLDSNGQVKLSDFGLSRPISEKS  157 (259)
T ss_dssp             --TTEBHHHHHHHTCT-TTSBHHHHHHHHHHHHHHHHHHHH---TTEEEST-SGGGEEEETTTEEEEESTTTGEETTTSS
T ss_pred             cccccccccccccccc-cccccccccccccccccccccccc---cccccccccccccccccccccccccccccccccccc
Confidence            9999999999988622 269999999999999999999998   899999999999999999999999999998773322


Q ss_pred             c-ceeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhh-CCCCCCCCCccHHHHHHHHHHhCchhHHHHHhhhcC
Q 005257          523 V-ASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLS-GRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRAK  600 (705)
Q Consensus       523 ~-~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~Ellt-G~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~l~~~  600 (705)
                      . .......+...|+|||.+....++.++||||||+++|||++ |+.||.....   ..+...+.++..           
T Consensus       158 ~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVysfG~~l~ei~~~~~~p~~~~~~---~~~~~~~~~~~~-----------  223 (259)
T PF07714_consen  158 KYKNDSSQQLPLRYLAPEVLKDGEYTKKSDVYSFGMLLYEILTLGKFPFSDYDN---EEIIEKLKQGQR-----------  223 (259)
T ss_dssp             SEEESTTSESGGGGS-HHHHHHSEESHHHHHHHHHHHHHHHHTTSSGTTTTSCH---HHHHHHHHTTEE-----------
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccccccccccccc---cccccccccccc-----------
Confidence            2 11222356789999999988889999999999999999999 7889876532   112222233222           


Q ss_pred             CCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Q 005257          601 GGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVL  636 (705)
Q Consensus       601 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L  636 (705)
                      ...+..+...+..++..||+.+|++||++.++++.|
T Consensus       224 ~~~~~~~~~~~~~li~~C~~~~p~~RPs~~~i~~~L  259 (259)
T PF07714_consen  224 LPIPDNCPKDIYSLIQQCWSHDPEKRPSFQEILQEL  259 (259)
T ss_dssp             TTSBTTSBHHHHHHHHHHT-SSGGGS--HHHHHHHH
T ss_pred             ceeccchhHHHHHHHHHHcCCChhhCcCHHHHHhcC
Confidence            112233456688999999999999999999999876

Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....

>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor

Probab=100.00  E-value=1.2e-38  Score=348.24  Aligned_cols=262  Identities=25%  Similarity=0.423  Sum_probs=205.2

Q ss_pred             HhCCCCcceEEeecCceEEEEEEEcC-----CCeEEEEEEeccCC-chhHHHHHHHHHHhccC-CCCCcceeeeeeeecc
Q 005257          362 ATKGFSEENVIGVGGNGKVYKGVLEG-----GGAEIAVKRISHEN-DGGTRAFLAEISSLGRL-KHKSLVGLRGWCKREK  434 (705)
Q Consensus       362 at~~f~~~~~LG~G~fg~Vy~~~~~~-----~~~~vavK~i~~~~-~~~~~~~~~Ei~~l~~l-~Hpniv~l~g~~~~~~  434 (705)
                      ..++|+..+.||+|+||.||+|+...     ++..||||+++... ....+.+.+|+.+++.+ +||||++++++|.. .
T Consensus        36 ~~~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~~h~nIv~~~~~~~~-~  114 (374)
T cd05106          36 PRDNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHTDEREALMSELKILSHLGQHKNIVNLLGACTH-G  114 (374)
T ss_pred             cHHHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCCHHHHHHHHHHHHHHHhhccCCceeeEeeEecC-C
Confidence            34578889999999999999998643     33579999997543 33356688999999999 89999999998876 6


Q ss_pred             CceEEEEeeCCCCChhHHHHhcCC--------------------------------------------------------
Q 005257          435 GSLMLVYDYMENGSLDKWIFQCDG--------------------------------------------------------  458 (705)
Q Consensus       435 ~~~~lV~E~~~~gsL~~~L~~~~~--------------------------------------------------------  458 (705)
                      +..++||||+++|+|.+++.....                                                        
T Consensus       115 ~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  194 (374)
T cd05106         115 GPVLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSSSSQS  194 (374)
T ss_pred             CCeEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCcccccccc
Confidence            688999999999999999864311                                                        


Q ss_pred             -----------CCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecCCCCcce-e
Q 005257          459 -----------SMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVAS-T  526 (705)
Q Consensus       459 -----------~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~~~~~~~-~  526 (705)
                                 ...+++.++++++.||+.||.|||+   ++|+||||||+|||+++++.+||+|||+++......... .
T Consensus       195 ~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~---~giiHrDLkp~Nil~~~~~~~kL~DfGla~~~~~~~~~~~~  271 (374)
T cd05106         195 SDSKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLAS---KNCIHRDVAARNVLLTDGRVAKICDFGLARDIMNDSNYVVK  271 (374)
T ss_pred             ccccchhccCCCCCcCHHHHHHHHHHHHHHHHHHHH---CCEEeccCchheEEEeCCCeEEEeeceeeeeccCCcceeec
Confidence                       1247889999999999999999998   999999999999999999999999999998654432211 1


Q ss_pred             eeeeccccCCCccccccCCCCccccEEEEehhHHHHhh-CCCCCCCCCccHHHHHHHHHHhCchhHHHHHhhhcCCCCCH
Q 005257          527 TRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLS-GRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRAKGGFDE  605 (705)
Q Consensus       527 ~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~Ellt-G~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~l~~~~~~~~  605 (705)
                      ....++..|||||++.+..++.++|||||||++|||++ |+.||......  .........+         ..  ...+.
T Consensus       272 ~~~~~~~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~--~~~~~~~~~~---------~~--~~~~~  338 (374)
T cd05106         272 GNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGKSPYPGILVN--SKFYKMVKRG---------YQ--MSRPD  338 (374)
T ss_pred             cCCCCccceeCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCcccccc--HHHHHHHHcc---------cC--ccCCC
Confidence            12234668999999988899999999999999999997 99999754321  1111111111         11  11111


Q ss_pred             HHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHhcc
Q 005257          606 DEVERVLHLGLLCAYPDPRARPTMRQVVKVLEGKI  640 (705)
Q Consensus       606 ~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~  640 (705)
                      .....+.+++..||+.||++||++.++++.|++.+
T Consensus       339 ~~~~~l~~li~~cl~~dp~~RPs~~~l~~~l~~~~  373 (374)
T cd05106         339 FAPPEIYSIMKMCWNLEPTERPTFSQISQLIQRQL  373 (374)
T ss_pred             CCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHh
Confidence            22356889999999999999999999999998653

Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti

>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

Probab=100.00  E-value=4.2e-38  Score=329.86  Aligned_cols=256  Identities=25%  Similarity=0.477  Sum_probs=207.7

Q ss_pred             CCCcceEEeecCceEEEEEEEcCCC-----eEEEEEEeccCCc-hhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceE
Q 005257          365 GFSEENVIGVGGNGKVYKGVLEGGG-----AEIAVKRISHEND-GGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLM  438 (705)
Q Consensus       365 ~f~~~~~LG~G~fg~Vy~~~~~~~~-----~~vavK~i~~~~~-~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~  438 (705)
                      +|+..+.||+|+||.||+|.....+     ..||+|.+..... .....|.+|+.++.+++||||+++++++.. ....+
T Consensus         6 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~-~~~~~   84 (283)
T cd05048           6 AVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQHPNIVCLLGVCTK-EQPTC   84 (283)
T ss_pred             HcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCCHHHHHHHHHHHHHHHhcCCcccceEEEEEcC-CCceE
Confidence            5777889999999999999986554     6799999865433 345678999999999999999999998875 56789


Q ss_pred             EEEeeCCCCChhHHHHhcCC-------------CCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCC
Q 005257          439 LVYDYMENGSLDKWIFQCDG-------------SMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEM  505 (705)
Q Consensus       439 lV~E~~~~gsL~~~L~~~~~-------------~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~  505 (705)
                      ++|||+++|+|.+++.....             ...+++.+++.++.|++.||.|||+   .+++|+||||+||++++++
T Consensus        85 ~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~---~~i~H~dlkp~Nil~~~~~  161 (283)
T cd05048          85 MLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSS---HHFVHRDLAARNCLVGEGL  161 (283)
T ss_pred             EEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHh---CCeeccccccceEEEcCCC
Confidence            99999999999999976421             1358899999999999999999998   9999999999999999999


Q ss_pred             CeeeeeeccceecCCCCc-ceeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhh-CCCCCCCCCccHHHHHHHH
Q 005257          506 NGRLGDFGLARMHGHGQV-ASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLS-GRRPIEEGKPNLVEMVWEL  583 (705)
Q Consensus       506 ~~kL~DFGla~~~~~~~~-~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~Ellt-G~~Pf~~~~~~~~~~v~~~  583 (705)
                      .+||+|||+++....... .......+++.|+|||.+.+..++.++|||||||++|||++ |..||......   .+...
T Consensus       162 ~~~L~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~il~el~~~g~~p~~~~~~~---~~~~~  238 (283)
T cd05048         162 TVKISDFGLSRDIYSADYYRVQSKSLLPVRWMPPEAILYGKFTTESDIWSFGVVLWEIFSYGLQPYYGFSNQ---EVIEM  238 (283)
T ss_pred             cEEECCCcceeeccccccccccCCCcccccccCHHHhccCcCchhhhHHHHHHHHHHHHcCCCCCCCCCCHH---HHHHH
Confidence            999999999986543221 12223456788999999988889999999999999999998 99999764421   12222


Q ss_pred             HHhCchhHHHHHhhhcCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHh
Q 005257          584 MVQGKLLDALDARLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLEG  638 (705)
Q Consensus       584 ~~~~~~~~~id~~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  638 (705)
                      +..+..           ...+...+..+.+++..||+.||.+||++.++++.|+.
T Consensus       239 i~~~~~-----------~~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~i~~~l~~  282 (283)
T cd05048         239 IRSRQL-----------LPCPEDCPARVYALMIECWNEIPARRPRFKDIHTRLRS  282 (283)
T ss_pred             HHcCCc-----------CCCcccCCHHHHHHHHHHccCChhhCcCHHHHHHHHhc
Confidence            222211           12234456788999999999999999999999999974

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer

>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]

Probab=100.00  E-value=2.2e-38  Score=344.81  Aligned_cols=302  Identities=21%  Similarity=0.261  Sum_probs=219.1

Q ss_pred             CCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCCchhHHHHHHHHHHhccCC-C-----CCcceeeeeeeeccCceE
Q 005257          365 GFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLK-H-----KSLVGLRGWCKREKGSLM  438 (705)
Q Consensus       365 ~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~~~~~~~~~Ei~~l~~l~-H-----pniv~l~g~~~~~~~~~~  438 (705)
                      +|.+.+.||+|.||.|.||.+..+++.||||+++.. ..-.++-..|+.+|..|+ |     -|+|++++++.. ++++|
T Consensus       187 rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~-k~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~f-r~Hlc  264 (586)
T KOG0667|consen  187 RYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNK-KRFLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYF-RNHLC  264 (586)
T ss_pred             EEEEEEEecccccceeEEEEecCCCcEEEEEeeccC-hHHHHHHHHHHHHHHHHhccCCCCCeeEEEeeecccc-cccee
Confidence            788999999999999999999999999999999654 334455677999999997 4     389999998886 88999


Q ss_pred             EEEeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccC--CCeeeeeeccce
Q 005257          439 LVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKE--MNGRLGDFGLAR  516 (705)
Q Consensus       439 lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~--~~~kL~DFGla~  516 (705)
                      ||+|.+.. +|.++|+.++-+ .++...++.++.||+.||..||+   .+|||+||||+||||.+-  ..+||+|||.++
T Consensus       265 iVfELL~~-NLYellK~n~f~-Glsl~~ir~~~~Qil~~L~~L~~---l~IIHcDLKPENILL~~~~r~~vKVIDFGSSc  339 (586)
T KOG0667|consen  265 IVFELLST-NLYELLKNNKFR-GLSLPLVRKFAQQILTALLFLHE---LGIIHCDLKPENILLKDPKRSRIKVIDFGSSC  339 (586)
T ss_pred             eeehhhhh-hHHHHHHhcCCC-CCCHHHHHHHHHHHHHHHHHHHh---CCeeeccCChhheeeccCCcCceeEEeccccc
Confidence            99999965 999999887655 69999999999999999999998   999999999999999754  369999999998


Q ss_pred             ecCCCCcceeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHH-HhCchhH-HHH
Q 005257          517 MHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELM-VQGKLLD-ALD  594 (705)
Q Consensus       517 ~~~~~~~~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~-~~~~~~~-~id  594 (705)
                      .....-.    ..+.++.|+|||++.+.+|+.+.||||||||+.||++|.+.|.+..+  .+.+...+ ..|.... .++
T Consensus       340 ~~~q~vy----tYiQSRfYRAPEVILGlpY~~~IDmWSLGCIlAEL~tG~PLfpG~ne--~DQl~~I~e~lG~Pp~~mL~  413 (586)
T KOG0667|consen  340 FESQRVY----TYIQSRFYRAPEVILGLPYDTAIDMWSLGCILAELFTGEPLFPGDNE--YDQLARIIEVLGLPPPKMLD  413 (586)
T ss_pred             ccCCcce----eeeeccccccchhhccCCCCCccceeehhhhHHhHhcCccccCCCCH--HHHHHHHHHHhCCCCHHHHH
Confidence            7654332    45778999999999999999999999999999999999877776553  22222221 1222111 222


Q ss_pred             HhhhcCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHhcccc--CC------CCCcc-hhhHHHHHHhhccccc
Q 005257          595 ARLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLEGKIEA--GI------ENETE-DMDAYLLQQVKSKDMW  665 (705)
Q Consensus       595 ~~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~~--~~------~~~~~-~~~~~~~~~~~~~~~~  665 (705)
                      ..-+....++     .+......|-..+-.+-+...++.+.+......  .|      +.... ..+..+.++++.+..|
T Consensus       414 ~~~~~~kff~-----~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~P~~~~~l~~~~~~~~~~~F~dflk~~L~~  488 (586)
T KOG0667|consen  414 TAKKAHKFFT-----SLKGFPRLCVETSAPRGTKSPEVRKYYRKARLERRGPPGSRSLESGLPKADDKLFIDFLKRCLEW  488 (586)
T ss_pred             hccccceehh-----ccCCceeeeeeecccccccchhhhhhhhhhcccccCCCCCcccchhcccccHHHHHHHHHHHhcc
Confidence            2111111111     101111113322211111222333322211110  11      11112 3456678999999999


Q ss_pred             cccccccccCCCCCCCccc
Q 005257          666 ANYSRSFGYGYATHPTFHD  684 (705)
Q Consensus       666 ~~~~r~~~~~~~~hp~f~~  684 (705)
                      +|..|.++.+++.||||+.
T Consensus       489 dP~~R~tp~qal~Hpfl~~  507 (586)
T KOG0667|consen  489 DPAERITPAQALNHPFLTG  507 (586)
T ss_pred             CchhcCCHHHHhcCccccc
Confidence            9999999999999999983

>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=3.6e-38  Score=341.12  Aligned_cols=253  Identities=24%  Similarity=0.322  Sum_probs=205.5

Q ss_pred             CCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccC---CchhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEEE
Q 005257          364 KGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHE---NDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLV  440 (705)
Q Consensus       364 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~---~~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~lV  440 (705)
                      ++|...+.||+|+||+||+|....+++.||||+++..   .....+.+.+|++++..++||||+++++++.. ++.+++|
T Consensus         1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~-~~~~~lv   79 (350)
T cd05573           1 DDFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSFQD-EEHLYLV   79 (350)
T ss_pred             CCceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhheec-CCeEEEE
Confidence            4688899999999999999999988999999998754   22445678899999999999999999998876 6789999


Q ss_pred             EeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecCC
Q 005257          441 YDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGH  520 (705)
Q Consensus       441 ~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~~  520 (705)
                      |||+++++|.+++.+.   ..+++..+..++.|++.||.|||+   .+|+||||||+|||++.++.+||+|||+++....
T Consensus        80 ~e~~~~~~L~~~l~~~---~~l~~~~~~~i~~qi~~aL~~LH~---~giiH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~  153 (350)
T cd05573          80 MEYMPGGDLMNLLIRK---DVFPEETARFYIAELVLALDSVHK---LGFIHRDIKPDNILIDADGHIKLADFGLCKKMNK  153 (350)
T ss_pred             EcCCCCCCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHH---CCeeccCCCHHHeEECCCCCEEeecCCCCccCcc
Confidence            9999999999999765   268999999999999999999998   9999999999999999999999999999986654


Q ss_pred             CC----------------------------cceeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhhCCCCCCCC
Q 005257          521 GQ----------------------------VASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEG  572 (705)
Q Consensus       521 ~~----------------------------~~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~  572 (705)
                      ..                            ........||+.|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~  233 (350)
T cd05573         154 AKDREYYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYEMLYGFPPFYSD  233 (350)
T ss_pred             cCcccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCceeeEecchhhhhhccCCCCCCCC
Confidence            33                            11223357899999999999999999999999999999999999999865


Q ss_pred             CccHHHHHHHHHHhCchhHHHHHhhhcCCCCCHHHHHHHHHHHHHcCCCCCCCCCC-HHHHHHH
Q 005257          573 KPNLVEMVWELMVQGKLLDALDARLRAKGGFDEDEVERVLHLGLLCAYPDPRARPT-MRQVVKV  635 (705)
Q Consensus       573 ~~~~~~~v~~~~~~~~~~~~id~~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs-~~evl~~  635 (705)
                      ...  . .+..+....      ..+.  ..........+.+++..|+. ||.+||+ +.+++++
T Consensus       234 ~~~--~-~~~~i~~~~------~~~~--~p~~~~~~~~~~~li~~ll~-dp~~R~~s~~~ll~h  285 (350)
T cd05573         234 TLQ--E-TYNKIINWK------ESLR--FPPDPPVSPEAIDLICRLLC-DPEDRLGSFEEIKSH  285 (350)
T ss_pred             CHH--H-HHHHHhccC------Cccc--CCCCCCCCHHHHHHHHHHcc-ChhhcCCCHHHHhcC
Confidence            421  1 111111100      0000  00011134567888899997 9999999 9999875

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the

>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]

Probab=100.00  E-value=1.4e-38  Score=337.57  Aligned_cols=255  Identities=23%  Similarity=0.309  Sum_probs=207.1

Q ss_pred             HHhCCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccC---CchhHHHHHHHHHHhccCCCCCcceeeeeeeeccCce
Q 005257          361 AATKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHE---NDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSL  437 (705)
Q Consensus       361 ~at~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~---~~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~  437 (705)
                      ...++|+....||+|+||.||+|+-+++|..+|+|++++.   ...+.+..++|-.+|...+.|.||+|+-.+.+ ...+
T Consensus       138 ~~~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsFQD-~~~L  216 (550)
T KOG0605|consen  138 LSLDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYSFQD-KEYL  216 (550)
T ss_pred             CCcccchhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEEecC-CCee
Confidence            3557899999999999999999999999999999999876   34567788999999999999999999988776 7899


Q ss_pred             EEEEeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeecccee
Q 005257          438 MLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARM  517 (705)
Q Consensus       438 ~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~  517 (705)
                      ||||||++||++..+|...+   .|++.....++.+++.|+.-||.   .|+|||||||+|+|||..|++||+||||+.-
T Consensus       217 YLiMEylPGGD~mTLL~~~~---~L~e~~arfYiaE~vlAI~~iH~---~gyIHRDIKPdNlLiD~~GHiKLSDFGLs~g  290 (550)
T KOG0605|consen  217 YLIMEYLPGGDMMTLLMRKD---TLTEDWARFYIAETVLAIESIHQ---LGYIHRDIKPDNLLIDAKGHIKLSDFGLSTG  290 (550)
T ss_pred             EEEEEecCCccHHHHHHhcC---cCchHHHHHHHHHHHHHHHHHHH---cCcccccCChhheeecCCCCEeeccccccch
Confidence            99999999999999997654   79999999999999999999998   9999999999999999999999999999842


Q ss_pred             cCC----------------------CCcc-----e-------------------eeeeeccccCCCccccccCCCCcccc
Q 005257          518 HGH----------------------GQVA-----S-------------------TTRVVGTVGYLAPEVFSSGRASTQTD  551 (705)
Q Consensus       518 ~~~----------------------~~~~-----~-------------------~~~~~gt~~y~APE~~~~~~~s~ksD  551 (705)
                      +..                      ....     .                   ....+|||.|||||++.+..|+..+|
T Consensus       291 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~kgY~~~cD  370 (550)
T KOG0605|consen  291 LDKKHRIESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLGKGYGKECD  370 (550)
T ss_pred             hhhhhhhhhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhcCCCCcccc
Confidence            210                      0000     0                   01258999999999999999999999


Q ss_pred             EEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhHHHHHhhhcCCCCCHHHHHHHHHHHHHcCCCCCCCCC---C
Q 005257          552 VFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRAKGGFDEDEVERVLHLGLLCAYPDPRARP---T  628 (705)
Q Consensus       552 VwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP---s  628 (705)
                      .||||||+|||+.|.+||....+.   ..|..+...+.      .+.  .........+..+|+..|+. ||++|-   .
T Consensus       371 wWSLG~ImyEmLvGyPPF~s~tp~---~T~rkI~nwr~------~l~--fP~~~~~s~eA~DLI~rll~-d~~~RLG~~G  438 (550)
T KOG0605|consen  371 WWSLGCIMYEMLVGYPPFCSETPQ---ETYRKIVNWRE------TLK--FPEEVDLSDEAKDLITRLLC-DPENRLGSKG  438 (550)
T ss_pred             HHHHHHHHHHHHhCCCCCCCCCHH---HHHHHHHHHhh------hcc--CCCcCcccHHHHHHHHHHhc-CHHHhcCccc
Confidence            999999999999999999886652   33333322211      111  11112233667788888877 999995   5


Q ss_pred             HHHHHH
Q 005257          629 MRQVVK  634 (705)
Q Consensus       629 ~~evl~  634 (705)
                      +.||.+
T Consensus       439 ~~EIK~  444 (550)
T KOG0605|consen  439 AEEIKK  444 (550)
T ss_pred             HHHHhc
Confidence            666665

>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha

Probab=100.00  E-value=4.1e-38  Score=337.59  Aligned_cols=244  Identities=25%  Similarity=0.346  Sum_probs=198.2

Q ss_pred             eEEeecCceEEEEEEEcCCCeEEEEEEeccC---CchhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEEEEeeCCC
Q 005257          370 NVIGVGGNGKVYKGVLEGGGAEIAVKRISHE---NDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMEN  446 (705)
Q Consensus       370 ~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~---~~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~lV~E~~~~  446 (705)
                      +.||+|+||.||++....+++.||+|++...   .......+.+|++++..++||||+++.+++.. .+.+++||||+++
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~-~~~~~lv~E~~~~   79 (325)
T cd05594           1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQT-HDRLCFVMEYANG   79 (325)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEEEc-CCEEEEEEeCCCC
Confidence            4699999999999999989999999998754   22345667889999999999999999998776 6789999999999


Q ss_pred             CChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecCCCCccee
Q 005257          447 GSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVAST  526 (705)
Q Consensus       447 gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~~~~~~~~  526 (705)
                      |+|..++....   .+++.++..++.||+.||.|||+  ..+|+||||||+|||++.++.+||+|||+++....... ..
T Consensus        80 ~~L~~~l~~~~---~l~~~~~~~~~~qi~~aL~~lH~--~~~ivHrDikp~NIll~~~~~~kL~Dfg~~~~~~~~~~-~~  153 (325)
T cd05594          80 GELFFHLSRER---VFSEDRARFYGAEIVSALDYLHS--EKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGA-TM  153 (325)
T ss_pred             CcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHh--cCCEEecCCCCCeEEECCCCCEEEecCCCCeecCCCCc-cc
Confidence            99998886533   68999999999999999999995  26999999999999999999999999999875432221 22


Q ss_pred             eeeeccccCCCccccccCCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhHHHHHhhhcCCCCCHH
Q 005257          527 TRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRAKGGFDED  606 (705)
Q Consensus       527 ~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~l~~~~~~~~~  606 (705)
                      ....||+.|+|||++.+..++.++|||||||++|||++|+.||......   .....+..+.            ..++..
T Consensus       154 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tG~~Pf~~~~~~---~~~~~i~~~~------------~~~p~~  218 (325)
T cd05594         154 KTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE---KLFELILMEE------------IRFPRT  218 (325)
T ss_pred             ccccCCcccCCHHHHccCCCCCccccccccceeeeeccCCCCCCCCCHH---HHHHHHhcCC------------CCCCCC
Confidence            3357999999999999889999999999999999999999999764321   1111111111            112223


Q ss_pred             HHHHHHHHHHHcCCCCCCCCC-----CHHHHHHH
Q 005257          607 EVERVLHLGLLCAYPDPRARP-----TMRQVVKV  635 (705)
Q Consensus       607 ~~~~l~~l~~~Cl~~dP~~RP-----s~~evl~~  635 (705)
                      ....+.+++..||+.||++|+     ++.+++++
T Consensus       219 ~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h  252 (325)
T cd05594         219 LSPEAKSLLSGLLKKDPKQRLGGGPDDAKEIMQH  252 (325)
T ss_pred             CCHHHHHHHHHHhhcCHHHhCCCCCCCHHHHhcC
Confidence            345678899999999999996     89998864

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien

>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]

Probab=100.00  E-value=1.5e-38  Score=338.53  Aligned_cols=253  Identities=23%  Similarity=0.394  Sum_probs=215.2

Q ss_pred             CCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCC--chhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEEEE
Q 005257          364 KGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHEN--DGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVY  441 (705)
Q Consensus       364 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~--~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~lV~  441 (705)
                      ++|...+++|+|+||.++..+++.++..+++|++....  ....+...+|+.++++++|||||.+.+.+..++..++|||
T Consensus         4 ~~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~hP~iv~y~ds~~~~~~~l~Ivm   83 (426)
T KOG0589|consen    4 DNYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSKLLHPNIVEYKDSFEEDGQLLCIVM   83 (426)
T ss_pred             chhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCchhhHHHHHHHHHHHhccCCCeeeeccchhcCCceEEEEE
Confidence            46778899999999999999999999999999997653  3445577899999999999999999998887444499999


Q ss_pred             eeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecCCC
Q 005257          442 DYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHG  521 (705)
Q Consensus       442 E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~~~  521 (705)
                      +|++||+|.+.+.+.+ +..++++.+..++.|++.|+.|||+   ..|+|||||+.|||++.+..+||+|||+|+.....
T Consensus        84 ~Y~eGg~l~~~i~~~k-~~~f~E~~i~~~~~Q~~~av~ylH~---~~iLHRDlK~~Nifltk~~~VkLgDfGlaK~l~~~  159 (426)
T KOG0589|consen   84 EYCEGGDLAQLIKEQK-GVLFPEERILKWFVQILLAVNYLHE---NRVLHRDLKCANIFLTKDKKVKLGDFGLAKILNPE  159 (426)
T ss_pred             eecCCCCHHHHHHHHh-hccccHHHHHHHHHHHHHHHHHHHh---hhhhcccchhhhhhccccCceeecchhhhhhcCCc
Confidence            9999999999998766 3479999999999999999999998   99999999999999999999999999999998776


Q ss_pred             CcceeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhHHHHHhhhcCC
Q 005257          522 QVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRAKG  601 (705)
Q Consensus       522 ~~~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~l~~~~  601 (705)
                      ... ...++||+.||.||++.+.+|..|+|||||||++|||++-+++|...+..  ..+ ..+.++         ..  .
T Consensus       160 ~~~-a~tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~yEm~~lk~aF~a~~m~--~Li-~ki~~~---------~~--~  224 (426)
T KOG0589|consen  160 DSL-ASTVVGTPYYMCPEILSDIPYNEKSDIWSLGCCLYEMCTLKPAFKASNMS--ELI-LKINRG---------LY--S  224 (426)
T ss_pred             hhh-hheecCCCcccCHHHhCCCCCCccCcchhhcchHHHHHhcccccCccchH--HHH-HHHhhc---------cC--C
Confidence            532 33479999999999999999999999999999999999999999875421  111 111111         10  3


Q ss_pred             CCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 005257          602 GFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKV  635 (705)
Q Consensus       602 ~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  635 (705)
                      ..+......+..++..|++.+|+.||++.+++..
T Consensus       225 Plp~~ys~el~~lv~~~l~~~P~~RPsa~~LL~~  258 (426)
T KOG0589|consen  225 PLPSMYSSELRSLVKSMLRKNPEHRPSALELLRR  258 (426)
T ss_pred             CCCccccHHHHHHHHHHhhcCCccCCCHHHHhhC
Confidence            3455667788999999999999999999999885

>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase

Probab=100.00  E-value=3.5e-38  Score=332.05  Aligned_cols=202  Identities=28%  Similarity=0.484  Sum_probs=173.1

Q ss_pred             CCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCCc-hhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEEEEe
Q 005257          364 KGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHEND-GGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYD  442 (705)
Q Consensus       364 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~-~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~lV~E  442 (705)
                      ++|...++||+|+||.||+|....++..||+|+++.... .....+.+|+.++++++||||+++++++.. ++..++|||
T Consensus         5 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~-~~~~~lv~e   83 (288)
T cd07871           5 ETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKNLKHANIVTLHDIIHT-ERCLTLVFE   83 (288)
T ss_pred             ccceEeeEEecCCCEEEEEEEECCCCCEEEEEEecccccCCcchhHHHHHHHHHhCCCCCEeeEEEEEcC-CCeEEEEEe
Confidence            468889999999999999999998999999999875432 334567899999999999999999998876 568899999


Q ss_pred             eCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecCCCC
Q 005257          443 YMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQ  522 (705)
Q Consensus       443 ~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~~~~  522 (705)
                      |+++ +|.+++.....  .+++..+..++.|++.||+|||+   ++|+||||||+|||++.++.+||+|||+++......
T Consensus        84 ~~~~-~l~~~l~~~~~--~~~~~~~~~~~~qi~~aL~~LH~---~~ivH~dlkp~Nil~~~~~~~kl~DfG~~~~~~~~~  157 (288)
T cd07871          84 YLDS-DLKQYLDNCGN--LMSMHNVKIFMFQLLRGLSYCHK---RKILHRDLKPQNLLINEKGELKLADFGLARAKSVPT  157 (288)
T ss_pred             CCCc-CHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCHHHEEECCCCCEEECcCcceeeccCCC
Confidence            9975 99998865432  57899999999999999999998   999999999999999999999999999997654322


Q ss_pred             cceeeeeeccccCCCcccccc-CCCCccccEEEEehhHHHHhhCCCCCCCCC
Q 005257          523 VASTTRVVGTVGYLAPEVFSS-GRASTQTDVFGFGILILEVLSGRRPIEEGK  573 (705)
Q Consensus       523 ~~~~~~~~gt~~y~APE~~~~-~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~  573 (705)
                      .. .....|++.|+|||++.+ ..++.++||||+||++|||++|+.||....
T Consensus       158 ~~-~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~~~~  208 (288)
T cd07871         158 KT-YSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGST  208 (288)
T ss_pred             cc-ccCceecccccChHHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence            21 223467999999999865 568999999999999999999999997643

Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament

>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors

Probab=100.00  E-value=3.9e-38  Score=339.48  Aligned_cols=262  Identities=26%  Similarity=0.400  Sum_probs=208.4

Q ss_pred             CCCCcceEEeecCceEEEEEEEcC-----CCeEEEEEEeccCC-chhHHHHHHHHHHhccC-CCCCcceeeeeeeeccCc
Q 005257          364 KGFSEENVIGVGGNGKVYKGVLEG-----GGAEIAVKRISHEN-DGGTRAFLAEISSLGRL-KHKSLVGLRGWCKREKGS  436 (705)
Q Consensus       364 ~~f~~~~~LG~G~fg~Vy~~~~~~-----~~~~vavK~i~~~~-~~~~~~~~~Ei~~l~~l-~Hpniv~l~g~~~~~~~~  436 (705)
                      ++|+..+.||+|+||.||+|...+     +++.||+|+++... ....+.+.+|+.++.++ +||||++++++|...+..
T Consensus         7 ~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~~~~~~   86 (337)
T cd05054           7 DRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGATASEYKALMTELKILIHIGHHLNVVNLLGACTKPGGP   86 (337)
T ss_pred             HHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCCCHHHHHHHHHHHHHHHhhccCcchhheeeeEecCCCC
Confidence            468889999999999999997543     34789999987543 23346788999999999 899999999998876778


Q ss_pred             eEEEEeeCCCCChhHHHHhcCC----------------------------------------------------------
Q 005257          437 LMLVYDYMENGSLDKWIFQCDG----------------------------------------------------------  458 (705)
Q Consensus       437 ~~lV~E~~~~gsL~~~L~~~~~----------------------------------------------------------  458 (705)
                      +++++||+++++|.+++.....                                                          
T Consensus        87 ~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  166 (337)
T cd05054          87 LMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDEEGDELY  166 (337)
T ss_pred             EEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccchhhhHHh
Confidence            9999999999999999864321                                                          


Q ss_pred             CCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecCCCCcc-eeeeeeccccCCC
Q 005257          459 SMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVA-STTRVVGTVGYLA  537 (705)
Q Consensus       459 ~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~~~~~~-~~~~~~gt~~y~A  537 (705)
                      ...+++..+.+++.||+.||.|||+   .+|+||||||+|||+++++.+||+|||+++........ ......++..|+|
T Consensus       167 ~~~l~~~~~~~~~~qi~~aL~~lH~---~~ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~~~~~~~~~~~~~~~~y~a  243 (337)
T cd05054         167 KEPLTLEDLISYSFQVARGMEFLAS---RKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMA  243 (337)
T ss_pred             hcCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCcceEEEeCCCcEEEeccccchhcccCcchhhccCCCCCccccC
Confidence            1268999999999999999999998   99999999999999999999999999999865433221 1222355778999


Q ss_pred             ccccccCCCCccccEEEEehhHHHHhh-CCCCCCCCCccHHHHHHHHHHhCchhHHHHHhhhcCCCCCHHHHHHHHHHHH
Q 005257          538 PEVFSSGRASTQTDVFGFGILILEVLS-GRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRAKGGFDEDEVERVLHLGL  616 (705)
Q Consensus       538 PE~~~~~~~s~ksDVwS~Gvvl~Ellt-G~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~l~~~~~~~~~~~~~l~~l~~  616 (705)
                      ||++.+..++.++|||||||++|||++ |+.||......  +.....+..+..           ...+......+.+++.
T Consensus       244 PE~~~~~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~--~~~~~~~~~~~~-----------~~~~~~~~~~~~~l~~  310 (337)
T cd05054         244 PESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQID--EEFCRRLKEGTR-----------MRAPEYATPEIYSIML  310 (337)
T ss_pred             cHHhcCCCCCccccHHHHHHHHHHHHHcCCCCCCCCCcc--HHHHHHHhccCC-----------CCCCccCCHHHHHHHH
Confidence            999999999999999999999999998 99998753221  111122222111           1112233456889999


Q ss_pred             HcCCCCCCCCCCHHHHHHHHHhccc
Q 005257          617 LCAYPDPRARPTMRQVVKVLEGKIE  641 (705)
Q Consensus       617 ~Cl~~dP~~RPs~~evl~~L~~~~~  641 (705)
                      +||+.+|++||++.|++++|+..++
T Consensus       311 ~cl~~~p~~RPs~~ell~~l~~~~~  335 (337)
T cd05054         311 DCWHNNPEDRPTFSELVEILGDLLQ  335 (337)
T ss_pred             HHccCChhhCcCHHHHHHHHHHHHh
Confidence            9999999999999999999997665

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto

>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

Probab=100.00  E-value=7.1e-38  Score=332.13  Aligned_cols=264  Identities=25%  Similarity=0.347  Sum_probs=199.7

Q ss_pred             hCCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCCc-hhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEEEE
Q 005257          363 TKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHEND-GGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVY  441 (705)
Q Consensus       363 t~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~-~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~lV~  441 (705)
                      .++|...+.||+|+||.||+|....+++.||||++..... .....+.+|+.+++.++||||+++++++.. +...++||
T Consensus         4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~-~~~~~lv~   82 (303)
T cd07869           4 ADSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEGTPFTAIREASLLKGLKHANIVLLHDIIHT-KETLTLVF   82 (303)
T ss_pred             cccceEeeeEEecCCEEEEEEEECCCCCEEEEEEeccccccccchhHHHHHHHHhhCCCCCcCeEEEEEec-CCeEEEEE
Confidence            4678999999999999999999998899999999875432 234567889999999999999999998876 66899999


Q ss_pred             eeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecCCC
Q 005257          442 DYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHG  521 (705)
Q Consensus       442 E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~~~  521 (705)
                      ||++ ++|.+++.....  .+++..+..++.|++.||.|||+   .+|+||||||+|||+++++.+||+|||+++.....
T Consensus        83 e~~~-~~l~~~~~~~~~--~~~~~~~~~~~~qi~~al~~lH~---~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~  156 (303)
T cd07869          83 EYVH-TDLCQYMDKHPG--GLHPENVKLFLFQLLRGLSYIHQ---RYILHRDLKPQNLLISDTGELKLADFGLARAKSVP  156 (303)
T ss_pred             ECCC-cCHHHHHHhCCC--CCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEECCCCCEEECCCCcceeccCC
Confidence            9996 688888765432  58899999999999999999998   99999999999999999999999999999754322


Q ss_pred             CcceeeeeeccccCCCcccccc-CCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHH-hCchhHH-------
Q 005257          522 QVASTTRVVGTVGYLAPEVFSS-GRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMV-QGKLLDA-------  592 (705)
Q Consensus       522 ~~~~~~~~~gt~~y~APE~~~~-~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~-~~~~~~~-------  592 (705)
                      .. ......||+.|+|||++.+ ..++.++||||+||++|||++|+.||...... .+....... .+.....       
T Consensus       157 ~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~  234 (303)
T cd07869         157 SH-TYSNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDI-QDQLERIFLVLGTPNEDTWPGVHS  234 (303)
T ss_pred             Cc-cCCCCcccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCccH-HHHHHHHHHHhCCCChhhccchhh
Confidence            21 1223468999999999865 45788999999999999999999999764321 111111110 0000000       


Q ss_pred             ---HH-HhhhcCCCCCH-------HHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 005257          593 ---LD-ARLRAKGGFDE-------DEVERVLHLGLLCAYPDPRARPTMRQVVKV  635 (705)
Q Consensus       593 ---id-~~l~~~~~~~~-------~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  635 (705)
                         .+ .+.........       .....+.+++..|++.||++|||+.|++++
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dp~~R~s~~~~l~h  288 (303)
T cd07869         235 LPHFKPERFTLYSPKNLRQAWNKLSYVNHAEDLASKLLQCFPKNRLSAQAALSH  288 (303)
T ss_pred             ccccccccccccCCccHHHHhhccCCChHHHHHHHHHhccCchhccCHHHHhcC
Confidence               00 00000000000       012457789999999999999999999873

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an

>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

Probab=100.00  E-value=3.9e-38  Score=338.32  Aligned_cols=254  Identities=23%  Similarity=0.298  Sum_probs=204.0

Q ss_pred             CCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCC---chhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEEE
Q 005257          364 KGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHEN---DGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLV  440 (705)
Q Consensus       364 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~---~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~lV  440 (705)
                      ++|...+.||+|+||+||++....+++.||+|+++...   ....+.+.+|+.+++.++||||+++++++.. .+..++|
T Consensus         1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~~-~~~~~lv   79 (330)
T cd05601           1 KDFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAFQD-KDNLYLV   79 (330)
T ss_pred             CCceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEEec-CCeEEEE
Confidence            46888999999999999999999999999999987542   2345668899999999999999999998775 6789999


Q ss_pred             EeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecCC
Q 005257          441 YDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGH  520 (705)
Q Consensus       441 ~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~~  520 (705)
                      |||+++|+|.+++.+...  .+++..+..++.|++.||.|||+   .+|+||||||+|||++.++.+||+|||++.....
T Consensus        80 ~e~~~~~~L~~~l~~~~~--~l~~~~~~~~~~qi~~aL~~lH~---~~i~H~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~  154 (330)
T cd05601          80 MEYQPGGDLLSLLNRYED--QFDEDMAQFYLAELVLAIHSVHQ---MGYVHRDIKPENVLIDRTGHIKLADFGSAARLTA  154 (330)
T ss_pred             ECCCCCCCHHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHH---CCeEcccCchHheEECCCCCEEeccCCCCeECCC
Confidence            999999999999976532  68999999999999999999998   9999999999999999999999999999987655


Q ss_pred             CCcceeeeeeccccCCCccccc------cCCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhHHHH
Q 005257          521 GQVASTTRVVGTVGYLAPEVFS------SGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALD  594 (705)
Q Consensus       521 ~~~~~~~~~~gt~~y~APE~~~------~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~~id  594 (705)
                      ..........||+.|+|||++.      ...++.++|||||||++|||++|+.||......  .. ...+.....     
T Consensus       155 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~--~~-~~~i~~~~~-----  226 (330)
T cd05601         155 NKMVNSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGTSA--KT-YNNIMNFQR-----  226 (330)
T ss_pred             CCceeeecccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCCCCCCCCCHH--HH-HHHHHcCCC-----
Confidence            4433334457899999999986      456789999999999999999999999765421  11 111111100     


Q ss_pred             HhhhcCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 005257          595 ARLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKV  635 (705)
Q Consensus       595 ~~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  635 (705)
                       .+.  ..........+.+++..|++ +|.+||++.+++++
T Consensus       227 -~~~--~~~~~~~~~~~~~li~~ll~-~p~~R~t~~~l~~h  263 (330)
T cd05601         227 -FLK--FPEDPKVSSDFLDLIQSLLC-GQKERLGYEGLCCH  263 (330)
T ss_pred             -ccC--CCCCCCCCHHHHHHHHHHcc-ChhhCCCHHHHhCC
Confidence             000  00011234567788888997 99999999998763

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor

>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

Probab=100.00  E-value=1.3e-37  Score=323.36  Aligned_cols=256  Identities=30%  Similarity=0.488  Sum_probs=207.2

Q ss_pred             CCCCcceEEeecCceEEEEEEEcCC---CeEEEEEEeccCC-chhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEE
Q 005257          364 KGFSEENVIGVGGNGKVYKGVLEGG---GAEIAVKRISHEN-DGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLML  439 (705)
Q Consensus       364 ~~f~~~~~LG~G~fg~Vy~~~~~~~---~~~vavK~i~~~~-~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~l  439 (705)
                      ++|+..+.||+|+||.||+|.+...   ...||||.++... .....+|.+|+.++++++||||+++++++.. .+..++
T Consensus         4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~i   82 (266)
T cd05033           4 SYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFDHPNIIRLEGVVTK-SRPVMI   82 (266)
T ss_pred             HHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCcceEeEEEec-CCceEE
Confidence            5688899999999999999998643   4579999987553 3345678999999999999999999998876 678899


Q ss_pred             EEeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecC
Q 005257          440 VYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHG  519 (705)
Q Consensus       440 V~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~  519 (705)
                      ||||+++++|.+++.....  .+++.++++++.|++.||.|||+   ++|+|+||||+||++++++.+||+|||+++...
T Consensus        83 v~e~~~~~~L~~~~~~~~~--~~~~~~~~~~~~~l~~~l~~Lh~---~~i~H~di~p~nili~~~~~~~l~dfg~~~~~~  157 (266)
T cd05033          83 ITEYMENGSLDKFLRENDG--KFTVGQLVGMLRGIASGMKYLSE---MNYVHRDLAARNILVNSNLVCKVSDFGLSRRLE  157 (266)
T ss_pred             EEEcCCCCCHHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCcceEEEcCCCCEEECccchhhccc
Confidence            9999999999999976443  68999999999999999999998   999999999999999999999999999998775


Q ss_pred             CCCcc-eeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhh-CCCCCCCCCccHHHHHHHHHHhCchhHHHHHhh
Q 005257          520 HGQVA-STTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLS-GRRPIEEGKPNLVEMVWELMVQGKLLDALDARL  597 (705)
Q Consensus       520 ~~~~~-~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~Ellt-G~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~l  597 (705)
                      ..... ......++..|+|||.+.+..++.++||||||+++|||++ |..||.....   ......+..+..        
T Consensus       158 ~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~~---~~~~~~~~~~~~--------  226 (266)
T cd05033         158 DSEATYTTKGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSYGERPYWDMSN---QDVIKAVEDGYR--------  226 (266)
T ss_pred             ccccceeccCCCCCccccChhhhccCCCccccchHHHHHHHHHHHccCCCCCCCCCH---HHHHHHHHcCCC--------
Confidence            22221 1112234678999999998889999999999999999998 9999865432   111222221110        


Q ss_pred             hcCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHhc
Q 005257          598 RAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLEGK  639 (705)
Q Consensus       598 ~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~  639 (705)
                         ...+......+.+++..||+.+|++||++.++++.|+..
T Consensus       227 ---~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~ei~~~l~~~  265 (266)
T cd05033         227 ---LPPPMDCPSALYQLMLDCWQKDRNERPTFSQIVSTLDKM  265 (266)
T ss_pred             ---CCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence               111233456789999999999999999999999999854

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment

>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn

Probab=100.00  E-value=5.3e-38  Score=325.08  Aligned_cols=254  Identities=25%  Similarity=0.435  Sum_probs=205.4

Q ss_pred             CCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCCchhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEEEEee
Q 005257          364 KGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDY  443 (705)
Q Consensus       364 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~lV~E~  443 (705)
                      ++|+..++||+|+||.||+|.... +..||+|.+.... ...+.+.+|+.++++++|+||+++++.+.. .+..+++|||
T Consensus         6 ~~~~~~~~lg~g~~g~v~~~~~~~-~~~v~iK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~lv~e~   82 (261)
T cd05072           6 ESIKLVKKLGAGQFGEVWMGYYNN-STKVAVKTLKPGT-MSVQAFLEEANLMKTLQHDKLVRLYAVVTK-EEPIYIITEY   82 (261)
T ss_pred             HHeEEeeecCCcCCceEEEEEecC-CceEEEEEccCCc-hhHHHHHHHHHHHHhCCCCCeeeEEEEEcC-CCCcEEEEec
Confidence            467888999999999999999764 5679999876433 345789999999999999999999998765 6678999999


Q ss_pred             CCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecCCCCc
Q 005257          444 MENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQV  523 (705)
Q Consensus       444 ~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~~~~~  523 (705)
                      +++++|.+++...... .+++.++..++.|++.||+|||+   .+++||||||+||+++.++.+||+|||+++.......
T Consensus        83 ~~~~~L~~~l~~~~~~-~~~~~~~~~~~~~l~~~l~~LH~---~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~  158 (261)
T cd05072          83 MAKGSLLDFLKSDEGG-KVLLPKLIDFSAQIAEGMAYIER---KNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEY  158 (261)
T ss_pred             CCCCcHHHHHHHhcCC-CCCHHHHHHHHHHHHHHHHHHHH---CCeeccccchhhEEecCCCcEEECCCccceecCCCce
Confidence            9999999999764332 68999999999999999999998   9999999999999999999999999999987654332


Q ss_pred             ceeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhh-CCCCCCCCCccHHHHHHHHHHhCchhHHHHHhhhcCCC
Q 005257          524 ASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLS-GRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRAKGG  602 (705)
Q Consensus       524 ~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~Ellt-G~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~l~~~~~  602 (705)
                      .......++..|+|||++....++.++|||||||++|||++ |+.||......   .....+..+.         .  ..
T Consensus       159 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~---~~~~~~~~~~---------~--~~  224 (261)
T cd05072         159 TAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLYEIVTYGKIPYPGMSNS---DVMSALQRGY---------R--MP  224 (261)
T ss_pred             eccCCCccceecCCHHHhccCCCChhhhhhhhHHHHHHHHccCCCCCCCCCHH---HHHHHHHcCC---------C--CC
Confidence            22222345678999999988889999999999999999998 99999754321   1111111111         0  11


Q ss_pred             CCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHh
Q 005257          603 FDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLEG  638 (705)
Q Consensus       603 ~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  638 (705)
                      ........+.+++.+||+.+|++||+++++.+.|+.
T Consensus       225 ~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~  260 (261)
T cd05072         225 RMENCPDELYDIMKTCWKEKAEERPTFDYLQSVLDD  260 (261)
T ss_pred             CCCCCCHHHHHHHHHHccCCcccCcCHHHHHHHHhc
Confidence            112234568899999999999999999999999974

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa

>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

Probab=100.00  E-value=9.5e-38  Score=334.45  Aligned_cols=243  Identities=25%  Similarity=0.359  Sum_probs=196.6

Q ss_pred             eEEeecCceEEEEEEEc---CCCeEEEEEEeccC----CchhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEEEEe
Q 005257          370 NVIGVGGNGKVYKGVLE---GGGAEIAVKRISHE----NDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYD  442 (705)
Q Consensus       370 ~~LG~G~fg~Vy~~~~~---~~~~~vavK~i~~~----~~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~lV~E  442 (705)
                      +.||+|+||.||++...   .+++.||||.++..    .......+.+|+.+++.++||||+++++++.. ++..++|||
T Consensus         2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~-~~~~~lv~e   80 (323)
T cd05584           2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQT-GGKLYLILE   80 (323)
T ss_pred             ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEec-CCeEEEEEe
Confidence            57999999999999864   46789999998653    22334567889999999999999999998876 678999999


Q ss_pred             eCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecCCCC
Q 005257          443 YMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQ  522 (705)
Q Consensus       443 ~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~~~~  522 (705)
                      |+++|+|.+++.+..   .+.+..+..++.|++.||.|||+   .+|+||||||+|||++.++.+||+|||+++......
T Consensus        81 ~~~~~~L~~~~~~~~---~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~  154 (323)
T cd05584          81 YLSGGELFMHLEREG---IFMEDTACFYLSEISLALEHLHQ---QGIIYRDLKPENILLDAQGHVKLTDFGLCKESIHEG  154 (323)
T ss_pred             CCCCchHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHeEECCCCCEEEeeCcCCeecccCC
Confidence            999999999986543   57888999999999999999998   999999999999999999999999999987543322


Q ss_pred             cceeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhHHHHHhhhcCCC
Q 005257          523 VASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRAKGG  602 (705)
Q Consensus       523 ~~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~l~~~~~  602 (705)
                      . ......||+.|+|||++.+..++.++|||||||++|||++|+.||......   .....+..+.            ..
T Consensus       155 ~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~pf~~~~~~---~~~~~~~~~~------------~~  218 (323)
T cd05584         155 T-VTHTFCGTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLTGAPPFTAENRK---KTIDKILKGK------------LN  218 (323)
T ss_pred             C-cccccCCCccccChhhccCCCCCCcceecccHHHHHHHhcCCCCCCCCCHH---HHHHHHHcCC------------CC
Confidence            2 223357899999999999888999999999999999999999999764421   1111121111            12


Q ss_pred             CCHHHHHHHHHHHHHcCCCCCCCCC-----CHHHHHHH
Q 005257          603 FDEDEVERVLHLGLLCAYPDPRARP-----TMRQVVKV  635 (705)
Q Consensus       603 ~~~~~~~~l~~l~~~Cl~~dP~~RP-----s~~evl~~  635 (705)
                      .+......+.+++..||+.||++||     ++.+++++
T Consensus       219 ~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~l~~h  256 (323)
T cd05584         219 LPPYLTPEARDLLKKLLKRNPSSRLGAGPGDAAEVQSH  256 (323)
T ss_pred             CCCCCCHHHHHHHHHHcccCHhHcCCCCCCCHHHHhcC
Confidence            2223345678999999999999999     78887764

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in

>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

Probab=100.00  E-value=1.3e-37  Score=323.11  Aligned_cols=260  Identities=24%  Similarity=0.376  Sum_probs=210.5

Q ss_pred             CCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccC---CchhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEEE
Q 005257          364 KGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHE---NDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLV  440 (705)
Q Consensus       364 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~---~~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~lV  440 (705)
                      ++|...+.||+|+||.||+|+...+++.||||.++..   .......+.+|++++++++||||+++++++.. .+..++|
T Consensus         2 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~~v   80 (267)
T cd08228           2 ANFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFIE-DNELNIV   80 (267)
T ss_pred             cceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEEE-CCeEEEE
Confidence            4688899999999999999999988999999987643   23344578999999999999999999998876 6688999


Q ss_pred             EeeCCCCChhHHHHhcC-CCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecC
Q 005257          441 YDYMENGSLDKWIFQCD-GSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHG  519 (705)
Q Consensus       441 ~E~~~~gsL~~~L~~~~-~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~  519 (705)
                      +||+++|+|.+++.... ....+++..+..++.|++.||.|||+   .+++|+||||+||+++.++.++|+|||++....
T Consensus        81 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~---~~i~H~dl~~~nil~~~~~~~~l~d~g~~~~~~  157 (267)
T cd08228          81 LELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHS---RRVMHRDIKPANVFITATGVVKLGDLGLGRFFS  157 (267)
T ss_pred             EEecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhh---CCeeCCCCCHHHEEEcCCCCEEECccccceecc
Confidence            99999999999886432 22358899999999999999999998   999999999999999999999999999998764


Q ss_pred             CCCcceeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhHHHHHhhhc
Q 005257          520 HGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRA  599 (705)
Q Consensus       520 ~~~~~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~l~~  599 (705)
                      ..... .....|++.|+|||.+.+..++.++||||||+++|||++|+.||........+.. ..+......         
T Consensus       158 ~~~~~-~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~p~~~~~~~~~~~~-~~~~~~~~~---------  226 (267)
T cd08228         158 SKTTA-AHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLFSLC-QKIEQCDYP---------  226 (267)
T ss_pred             chhHH-HhcCCCCccccChhhhccCCCCchhhHHHHHHHHHHHhcCCCCCccccccHHHHH-HHHhcCCCC---------
Confidence            33221 1234678899999999888899999999999999999999999976543322221 111111100         


Q ss_pred             CCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHhc
Q 005257          600 KGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLEGK  639 (705)
Q Consensus       600 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~  639 (705)
                       ..........+.+++.+||+.+|++||++.++++.|+++
T Consensus       227 -~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~vl~~~~~~  265 (267)
T cd08228         227 -PLPTEHYSEKLRELVSMCIYPDPDQRPDIGYVHQIAKQM  265 (267)
T ss_pred             -CCChhhcCHHHHHHHHHHCCCCcccCcCHHHHHHHHHHh
Confidence             111223446789999999999999999999999999864

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase

>PLN00034 mitogen-activated protein kinase kinase; Provisional

Probab=100.00  E-value=3e-38  Score=342.56  Aligned_cols=247  Identities=25%  Similarity=0.411  Sum_probs=194.9

Q ss_pred             CCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCCc-hhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEEEEeeC
Q 005257          366 FSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHEND-GGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYM  444 (705)
Q Consensus       366 f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~-~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~lV~E~~  444 (705)
                      |...+.||+|+||.||+|.+..+++.||||++..... ...+.+.+|+++++.++|+||+++++++.. .+.+++||||+
T Consensus        76 ~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-~~~~~lv~e~~  154 (353)
T PLN00034         76 LERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNHEDTVRRQICREIEILRDVNHPNVVKCHDMFDH-NGEIQVLLEFM  154 (353)
T ss_pred             HhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCCcHHHHHHHHHHHHHHHhCCCCCcceeeeEecc-CCeEEEEEecC
Confidence            3446789999999999999998899999999865433 345678999999999999999999998876 67899999999


Q ss_pred             CCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecCCCCcc
Q 005257          445 ENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVA  524 (705)
Q Consensus       445 ~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~~~~~~  524 (705)
                      ++|+|....       ...+..+..++.||+.||.|||+   .+|+||||||+|||+++++.+||+|||+++....... 
T Consensus       155 ~~~~L~~~~-------~~~~~~~~~i~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~~~~kL~DfG~~~~~~~~~~-  223 (353)
T PLN00034        155 DGGSLEGTH-------IADEQFLADVARQILSGIAYLHR---RHIVHRDIKPSNLLINSAKNVKIADFGVSRILAQTMD-  223 (353)
T ss_pred             CCCcccccc-------cCCHHHHHHHHHHHHHHHHHHHH---CCEeecCCCHHHEEEcCCCCEEEcccccceecccccc-
Confidence            999986532       45677888999999999999998   9999999999999999999999999999987643321 


Q ss_pred             eeeeeeccccCCCcccccc-----CCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhHHHHHhhhc
Q 005257          525 STTRVVGTVGYLAPEVFSS-----GRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRA  599 (705)
Q Consensus       525 ~~~~~~gt~~y~APE~~~~-----~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~l~~  599 (705)
                      ......||..|+|||++..     ...+.++|||||||++|||++|+.||.................           ..
T Consensus       224 ~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~-----------~~  292 (353)
T PLN00034        224 PCNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVGRQGDWASLMCAICM-----------SQ  292 (353)
T ss_pred             cccccccCccccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHHhc-----------cC
Confidence            1233578999999998743     2345689999999999999999999974332111111111100           00


Q ss_pred             CCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 005257          600 KGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKV  635 (705)
Q Consensus       600 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  635 (705)
                      ...........+.+++..||+.||++||++.|++++
T Consensus       293 ~~~~~~~~~~~l~~li~~~l~~~P~~Rpt~~ell~h  328 (353)
T PLN00034        293 PPEAPATASREFRHFISCCLQREPAKRWSAMQLLQH  328 (353)
T ss_pred             CCCCCCccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence            012223345678899999999999999999999885

>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

Probab=100.00  E-value=1e-37  Score=335.36  Aligned_cols=252  Identities=25%  Similarity=0.308  Sum_probs=200.1

Q ss_pred             CCCcceEEeecCceEEEEEEEc---CCCeEEEEEEeccC----CchhHHHHHHHHHHhccC-CCCCcceeeeeeeeccCc
Q 005257          365 GFSEENVIGVGGNGKVYKGVLE---GGGAEIAVKRISHE----NDGGTRAFLAEISSLGRL-KHKSLVGLRGWCKREKGS  436 (705)
Q Consensus       365 ~f~~~~~LG~G~fg~Vy~~~~~---~~~~~vavK~i~~~----~~~~~~~~~~Ei~~l~~l-~Hpniv~l~g~~~~~~~~  436 (705)
                      +|+..+.||+|+||.||++...   .+++.||+|++...    .....+.+..|++++..+ +||||+++++++.. .+.
T Consensus         1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~-~~~   79 (332)
T cd05614           1 NFELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQT-EAK   79 (332)
T ss_pred             CceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEec-CCE
Confidence            4778899999999999999874   46789999998643    223345678899999999 59999999987765 678


Q ss_pred             eEEEEeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccce
Q 005257          437 LMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLAR  516 (705)
Q Consensus       437 ~~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~  516 (705)
                      +++||||+++|+|.+++....   .+++.++..++.||+.||.|||+   .+|+||||||+|||++.++.+||+|||+++
T Consensus        80 ~~lv~e~~~~g~L~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lH~---~~ivHrDlkp~Nili~~~~~~kl~DfG~~~  153 (332)
T cd05614          80 LHLILDYVSGGEMFTHLYQRD---NFSEDEVRFYSGEIILALEHLHK---LGIVYRDIKLENILLDSEGHVVLTDFGLSK  153 (332)
T ss_pred             EEEEEeCCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHH---CCcEecCCCHHHeEECCCCCEEEeeCcCCc
Confidence            899999999999999997543   58999999999999999999998   999999999999999999999999999998


Q ss_pred             ecCCCCcceeeeeeccccCCCccccccC-CCCccccEEEEehhHHHHhhCCCCCCCCCc-cHHHHHHHHHHhCchhHHHH
Q 005257          517 MHGHGQVASTTRVVGTVGYLAPEVFSSG-RASTQTDVFGFGILILEVLSGRRPIEEGKP-NLVEMVWELMVQGKLLDALD  594 (705)
Q Consensus       517 ~~~~~~~~~~~~~~gt~~y~APE~~~~~-~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~-~~~~~v~~~~~~~~~~~~id  594 (705)
                      ..............||+.|||||++.+. .++.++|||||||++|||++|+.||..... .....+...+..        
T Consensus       154 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~--------  225 (332)
T cd05614         154 EFLSEEKERTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTLEGERNTQSEVSRRILK--------  225 (332)
T ss_pred             cccccCCCccccccCCccccCHHHhcCCCCCCCccccccchhhhhhhhcCCCCCCCCCCCCCHHHHHHHHhc--------
Confidence            6544433334456799999999999765 478899999999999999999999964322 111111111111        


Q ss_pred             HhhhcCCCCCHHHHHHHHHHHHHcCCCCCCCCC-----CHHHHHHH
Q 005257          595 ARLRAKGGFDEDEVERVLHLGLLCAYPDPRARP-----TMRQVVKV  635 (705)
Q Consensus       595 ~~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP-----s~~evl~~  635 (705)
                          ....++......+.+++..||+.||++||     ++++++++
T Consensus       226 ----~~~~~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h  267 (332)
T cd05614         226 ----CDPPFPSFIGPEAQDLLHKLLRKDPKKRLGAGPQGASEIKEH  267 (332)
T ss_pred             ----CCCCCCCCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHHcC
Confidence                11222233445678899999999999999     67777764

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor

Probab=100.00  E-value=6.1e-38  Score=334.74  Aligned_cols=257  Identities=21%  Similarity=0.375  Sum_probs=205.5

Q ss_pred             CCCCcceEEeecCceEEEEEEEcCCCe----EEEEEEeccCC-chhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceE
Q 005257          364 KGFSEENVIGVGGNGKVYKGVLEGGGA----EIAVKRISHEN-DGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLM  438 (705)
Q Consensus       364 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~----~vavK~i~~~~-~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~  438 (705)
                      .+|+..+.||+|+||.||+|++..+++    .||+|.++... ....+++.+|+.+++.++||||++++++|..  ...+
T Consensus         7 ~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~--~~~~   84 (316)
T cd05108           7 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLT--STVQ   84 (316)
T ss_pred             hhceeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEcC--CCce
Confidence            468889999999999999999865554    48999986543 3456788999999999999999999999875  3568


Q ss_pred             EEEeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceec
Q 005257          439 LVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMH  518 (705)
Q Consensus       439 lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~  518 (705)
                      +++||+++|+|.+++.+...  .+++..++.++.||+.||+|||+   .+|+||||||+|||+++++.+||+|||+++..
T Consensus        85 ~v~e~~~~g~l~~~l~~~~~--~~~~~~~~~~~~qi~~~L~~LH~---~~iiH~dlkp~Nill~~~~~~kl~DfG~a~~~  159 (316)
T cd05108          85 LITQLMPFGCLLDYVREHKD--NIGSQYLLNWCVQIAKGMNYLEE---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLL  159 (316)
T ss_pred             eeeecCCCCCHHHHHHhccc--cCCHHHHHHHHHHHHHHHHHHHh---cCeeccccchhheEecCCCcEEEccccccccc
Confidence            99999999999999976443  58899999999999999999998   99999999999999999999999999999876


Q ss_pred             CCCCccee-eeeeccccCCCccccccCCCCccccEEEEehhHHHHhh-CCCCCCCCCccHHHHHHHHHHhCchhHHHHHh
Q 005257          519 GHGQVAST-TRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLS-GRRPIEEGKPNLVEMVWELMVQGKLLDALDAR  596 (705)
Q Consensus       519 ~~~~~~~~-~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~Ellt-G~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~  596 (705)
                      ........ ....++..|+|||++.+..++.++|||||||++|||++ |+.||......   ........+..       
T Consensus       160 ~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slGv~l~el~t~g~~p~~~~~~~---~~~~~~~~~~~-------  229 (316)
T cd05108         160 GADEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS---EISSILEKGER-------  229 (316)
T ss_pred             cCCCcceeccCCccceeecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHH---HHHHHHhCCCC-------
Confidence            54332211 11234678999999998899999999999999999997 99999764321   11111111111       


Q ss_pred             hhcCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHhccc
Q 005257          597 LRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLEGKIE  641 (705)
Q Consensus       597 l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~  641 (705)
                          ...+..+...+..++..||+.+|++||++.+++..|.....
T Consensus       230 ----~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~l~~~l~~~~~  270 (316)
T cd05108         230 ----LPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMAR  270 (316)
T ss_pred             ----CCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHc
Confidence                11112234567889999999999999999999999886644

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor

>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

Probab=100.00  E-value=8e-38  Score=334.71  Aligned_cols=243  Identities=24%  Similarity=0.368  Sum_probs=197.0

Q ss_pred             eEEeecCceEEEEEEEcCCCeEEEEEEeccC---CchhHHHHHHHHHHhccC-CCCCcceeeeeeeeccCceEEEEeeCC
Q 005257          370 NVIGVGGNGKVYKGVLEGGGAEIAVKRISHE---NDGGTRAFLAEISSLGRL-KHKSLVGLRGWCKREKGSLMLVYDYME  445 (705)
Q Consensus       370 ~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~---~~~~~~~~~~Ei~~l~~l-~Hpniv~l~g~~~~~~~~~~lV~E~~~  445 (705)
                      +.||+|+||.||+|....+++.||||+++..   .....+.+..|.+++..+ +||||+++++++.. .+.+++||||++
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~-~~~~~lv~E~~~   79 (321)
T cd05591           1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQT-KDRLFFVMEYVN   79 (321)
T ss_pred             CccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEc-CCeEEEEEeCCC
Confidence            3699999999999999988999999998754   233455678899988866 79999999998876 678999999999


Q ss_pred             CCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecCCCCcce
Q 005257          446 NGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVAS  525 (705)
Q Consensus       446 ~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~~~~~~~  525 (705)
                      +|+|..++.+..   .+++..+..++.|++.||.|||+   .+|+||||||+|||++.++.+||+|||+++....... .
T Consensus        80 ~~~L~~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH~---~~ivHrDikp~Nill~~~~~~kL~Dfg~~~~~~~~~~-~  152 (321)
T cd05591          80 GGDLMFQIQRSR---KFDEPRSRFYAAEVTLALMFLHR---HGVIYRDLKLDNILLDAEGHCKLADFGMCKEGILNGV-T  152 (321)
T ss_pred             CCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHH---CCeeccCCCHHHeEECCCCCEEEeecccceecccCCc-c
Confidence            999999886543   58999999999999999999998   9999999999999999999999999999976432222 2


Q ss_pred             eeeeeccccCCCccccccCCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhHHHHHhhhcCCCCCH
Q 005257          526 TTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRAKGGFDE  605 (705)
Q Consensus       526 ~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~l~~~~~~~~  605 (705)
                      .....||+.|+|||++.+..++.++|||||||++|||++|+.||......   ...+.+..+.            ..++.
T Consensus       153 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~Pf~~~~~~---~~~~~i~~~~------------~~~p~  217 (321)
T cd05591         153 TTTFCGTPDYIAPEILQELEYGPSVDWWALGVLMYEMMAGQPPFEADNED---DLFESILHDD------------VLYPV  217 (321)
T ss_pred             ccccccCccccCHHHHcCCCCCCccceechhHHHHHHhcCCCCCCCCCHH---HHHHHHHcCC------------CCCCC
Confidence            23457899999999999889999999999999999999999999865421   1122222211            11122


Q ss_pred             HHHHHHHHHHHHcCCCCCCCCC-------CHHHHHHH
Q 005257          606 DEVERVLHLGLLCAYPDPRARP-------TMRQVVKV  635 (705)
Q Consensus       606 ~~~~~l~~l~~~Cl~~dP~~RP-------s~~evl~~  635 (705)
                      .....+.+++..|++.||++||       ++.+++++
T Consensus       218 ~~~~~~~~ll~~~L~~dp~~R~~~~~~~~~~~~~~~h  254 (321)
T cd05591         218 WLSKEAVSILKAFMTKNPNKRLGCVASQGGEDAIKQH  254 (321)
T ss_pred             CCCHHHHHHHHHHhccCHHHcCCCCCCCCCHHHHhcC
Confidence            2335678899999999999999       77777654

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to

>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

Probab=100.00  E-value=6.9e-38  Score=336.96  Aligned_cols=263  Identities=25%  Similarity=0.359  Sum_probs=199.4

Q ss_pred             CCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccC--CchhHHHHHHHHHHhccCCCCCcceeeeeeeecc----CceE
Q 005257          365 GFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHE--NDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREK----GSLM  438 (705)
Q Consensus       365 ~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~--~~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~----~~~~  438 (705)
                      +|+..+.||+|+||.||+|....++..||||++...  .......+.+|++++++++||||+++++++....    ..++
T Consensus         1 ry~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~   80 (338)
T cd07859           1 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDIY   80 (338)
T ss_pred             CeEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhhccchhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCceEE
Confidence            477889999999999999999989999999998643  2234457889999999999999999999875422    3479


Q ss_pred             EEEeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceec
Q 005257          439 LVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMH  518 (705)
Q Consensus       439 lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~  518 (705)
                      +||||++ ++|.+++....   .+++..+..++.|++.||.|||+   ++|+||||||+|||++.++.+||+|||+++..
T Consensus        81 lv~e~~~-~~L~~~l~~~~---~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~dlkp~NIll~~~~~~kL~Dfg~~~~~  153 (338)
T cd07859          81 VVFELME-SDLHQVIKAND---DLTPEHHQFFLYQLLRALKYIHT---ANVFHRDLKPKNILANADCKLKICDFGLARVA  153 (338)
T ss_pred             EEEecCC-CCHHHHHHhcc---cCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHeEECCCCcEEEccCcccccc
Confidence            9999995 68998886533   58999999999999999999998   99999999999999999999999999999865


Q ss_pred             CCCCc--ceeeeeeccccCCCcccccc--CCCCccccEEEEehhHHHHhhCCCCCCCCCcc-HHHHHHHH----------
Q 005257          519 GHGQV--ASTTRVVGTVGYLAPEVFSS--GRASTQTDVFGFGILILEVLSGRRPIEEGKPN-LVEMVWEL----------  583 (705)
Q Consensus       519 ~~~~~--~~~~~~~gt~~y~APE~~~~--~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~-~~~~v~~~----------  583 (705)
                      .....  .......||+.|+|||++.+  ..++.++|||||||++|||++|+.||...... ....+...          
T Consensus       154 ~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~  233 (338)
T cd07859         154 FNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLITDLLGTPSPETIS  233 (338)
T ss_pred             ccccCccccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCCHHHHH
Confidence            32221  11233578999999999865  57899999999999999999999999764321 11111110          


Q ss_pred             -HHhCchhHHHHHhhhcCCCCC-----HHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 005257          584 -MVQGKLLDALDARLRAKGGFD-----EDEVERVLHLGLLCAYPDPRARPTMRQVVKV  635 (705)
Q Consensus       584 -~~~~~~~~~id~~l~~~~~~~-----~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  635 (705)
                       +........+. .+.......     +.....+.+++..||+.||++||++.|++++
T Consensus       234 ~i~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~e~l~h  290 (338)
T cd07859         234 RVRNEKARRYLS-SMRKKQPVPFSQKFPNADPLALRLLERLLAFDPKDRPTAEEALAD  290 (338)
T ss_pred             HhhhhhHHHHHH-hhcccCCCchHHhcCCCChHHHHHHHHHcCcCcccCCCHHHHhcC
Confidence             11111000110 000000000     0123457889999999999999999999874

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos

>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]

Probab=100.00  E-value=8.5e-39  Score=326.14  Aligned_cols=247  Identities=22%  Similarity=0.397  Sum_probs=210.7

Q ss_pred             CCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccC---CchhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEEEE
Q 005257          365 GFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHE---NDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVY  441 (705)
Q Consensus       365 ~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~---~~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~lV~  441 (705)
                      +|++.+.||+|.||.|-+++....|+.||||.+++.   +.++.-.+.+||++|+.|+||||++++.++.. ++.+.|||
T Consensus        54 RyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEVFEN-kdKIvivM  132 (668)
T KOG0611|consen   54 RYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVFEN-KDKIVIVM  132 (668)
T ss_pred             HHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhhhcC-CceEEEEE
Confidence            566678899999999999999889999999998765   34555678999999999999999999998876 78999999


Q ss_pred             eeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecCCC
Q 005257          442 DYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHG  521 (705)
Q Consensus       442 E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~~~  521 (705)
                      ||..+|.|++|+..++   .|++.+...+++||..|+.|+|.   ++++|||||.+|||||+|+++||+||||+.++...
T Consensus       133 EYaS~GeLYDYiSer~---~LsErEaRhfFRQIvSAVhYCHk---nrVvHRDLKLENILLD~N~NiKIADFGLSNly~~~  206 (668)
T KOG0611|consen  133 EYASGGELYDYISERG---SLSEREARHFFRQIVSAVHYCHK---NRVVHRDLKLENILLDQNNNIKIADFGLSNLYADK  206 (668)
T ss_pred             EecCCccHHHHHHHhc---cccHHHHHHHHHHHHHHHHHHhh---ccceecccchhheeecCCCCeeeeccchhhhhccc
Confidence            9999999999997655   69999999999999999999998   99999999999999999999999999999988665


Q ss_pred             CcceeeeeeccccCCCccccccCCC-CccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhHHHHHhhhcC
Q 005257          522 QVASTTRVVGTVGYLAPEVFSSGRA-STQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRAK  600 (705)
Q Consensus       522 ~~~~~~~~~gt~~y~APE~~~~~~~-s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~l~~~  600 (705)
                      ..  .+.++|++.|.+||++.+.+| .+.+|-|||||+||-|+.|..||++.+..   .+...+..|..           
T Consensus       207 kf--LqTFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~Dhk---~lvrQIs~GaY-----------  270 (668)
T KOG0611|consen  207 KF--LQTFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDGRDHK---RLVRQISRGAY-----------  270 (668)
T ss_pred             cH--HHHhcCCcccCCccccCCCCCCCCccchhhHHHHHHHHhhcccccCCchHH---HHHHHhhcccc-----------
Confidence            44  345799999999999999887 58899999999999999999999875421   11122222322           


Q ss_pred             CCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Q 005257          601 GGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVL  636 (705)
Q Consensus       601 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L  636 (705)
                        ..++.+....-|++|++..+|++|.|+.+|..+-
T Consensus       271 --rEP~~PSdA~gLIRwmLmVNP~RRATieDiAsHW  304 (668)
T KOG0611|consen  271 --REPETPSDASGLIRWMLMVNPERRATIEDIASHW  304 (668)
T ss_pred             --cCCCCCchHHHHHHHHHhcCcccchhHHHHhhhh
Confidence              2233445567789999999999999999998864

>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

Probab=100.00  E-value=7.6e-38  Score=324.10  Aligned_cols=255  Identities=27%  Similarity=0.414  Sum_probs=206.5

Q ss_pred             hCCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCCchhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEEEEe
Q 005257          363 TKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYD  442 (705)
Q Consensus       363 t~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~lV~E  442 (705)
                      .++|+..+.||+|++|.||+|.+.. ++.||+|.++... ...+++.+|+.++++++||||+++++++.. .+..++|||
T Consensus         5 ~~~~~~~~~lg~g~~~~v~~~~~~~-~~~v~iK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~lv~e   81 (261)
T cd05068           5 RTSIQLLRKLGAGQFGEVWEGLWNN-TTPVAVKTLKPGT-MDPKDFLAEAQIMKKLRHPKLIQLYAVCTL-EEPIYIVTE   81 (261)
T ss_pred             hhheeeEEEecccCCccEEEEEecC-CeEEEEEeeCCCc-ccHHHHHHHHHHHHHCCCCCccceeEEEec-CCCeeeeee
Confidence            4568889999999999999999764 5779999986543 345678999999999999999999998876 668899999


Q ss_pred             eCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecCCCC
Q 005257          443 YMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQ  522 (705)
Q Consensus       443 ~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~~~~  522 (705)
                      |+++++|.+++..... ..+++.++..++.|++.||.|||+   .+++||||||+||++++++.+||+|||+++......
T Consensus        82 ~~~~~~L~~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~  157 (261)
T cd05068          82 LMKYGSLLEYLQGGAG-RALKLPQLIDMAAQVASGMAYLEA---QNYIHRDLAARNVLVGENNICKVADFGLARVIKEDI  157 (261)
T ss_pred             cccCCcHHHHHhccCC-CCCCHHHHHHHHHHHHHHHHHHHh---CCeeeccCCcceEEEcCCCCEEECCcceEEEccCCc
Confidence            9999999999976542 368999999999999999999998   999999999999999999999999999998765332


Q ss_pred             cceeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhh-CCCCCCCCCccHHHHHHHHHHhCchhHHHHHhhhcCC
Q 005257          523 VASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLS-GRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRAKG  601 (705)
Q Consensus       523 ~~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~Ellt-G~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~l~~~~  601 (705)
                      .........+..|+|||++.+..++.++||||||+++|||++ |+.||......   .....+..         ...  .
T Consensus       158 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~---~~~~~~~~---------~~~--~  223 (261)
T cd05068         158 YEAREGAKFPIKWTAPEAALYNRFSIKSDVWSFGILLTEIVTYGRMPYPGMTNA---EVLQQVDQ---------GYR--M  223 (261)
T ss_pred             ccccCCCcCceeccCccccccCCCCchhhHHHHHHHHHHHHhcCCCCCCCCCHH---HHHHHHHc---------CCC--C
Confidence            222221223457999999988899999999999999999999 99998754321   11111111         111  1


Q ss_pred             CCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHh
Q 005257          602 GFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLEG  638 (705)
Q Consensus       602 ~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  638 (705)
                      ..+......+.+++.+|++.+|++||++.++++.|+.
T Consensus       224 ~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~l~~~l~~  260 (261)
T cd05068         224 PCPPGCPKELYDIMLDCWKEDPDDRPTFETLQWKLED  260 (261)
T ss_pred             CCCCcCCHHHHHHHHHHhhcCcccCCCHHHHHHHHhc
Confidence            1223345678999999999999999999999999974

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a

>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=1.3e-37  Score=327.27  Aligned_cols=252  Identities=27%  Similarity=0.394  Sum_probs=203.6

Q ss_pred             CCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCC---chhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEEEE
Q 005257          365 GFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHEN---DGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVY  441 (705)
Q Consensus       365 ~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~---~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~lV~  441 (705)
                      +|+..++||+|+||.||++....+++.||||++....   ......+.+|+.++++++||||+++++.+.. ++.+++||
T Consensus         1 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-~~~~~lv~   79 (285)
T cd05605           1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYET-KDALCLVL   79 (285)
T ss_pred             CceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeeecC-CCeEEEEE
Confidence            4778899999999999999998889999999986532   2233557889999999999999999998876 56899999


Q ss_pred             eeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecCCC
Q 005257          442 DYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHG  521 (705)
Q Consensus       442 E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~~~  521 (705)
                      ||+++|+|.+++..... ..+++..+..++.|++.||.|||+   .+++||||||+||++++++.++|+|||+++.....
T Consensus        80 e~~~~~~L~~~~~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~  155 (285)
T cd05605          80 TLMNGGDLKFHIYNMGN-PGFDEERAVFYAAEITCGLEDLHR---ERIVYRDLKPENILLDDYGHIRISDLGLAVEIPEG  155 (285)
T ss_pred             eccCCCcHHHHHHhcCc-CCCCHHHHHHHHHHHHHHHHHHHH---CCcEecCCCHHHEEECCCCCEEEeeCCCceecCCC
Confidence            99999999998875432 268999999999999999999998   99999999999999999999999999999876433


Q ss_pred             CcceeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhhCCCCCCCCCccHH-HHHHHHHHhCchhHHHHHhhhcC
Q 005257          522 QVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLV-EMVWELMVQGKLLDALDARLRAK  600 (705)
Q Consensus       522 ~~~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~-~~v~~~~~~~~~~~~id~~l~~~  600 (705)
                      ..  .....|++.|+|||++.+..++.++||||+||++|||++|+.||........ +.+..         .+...   .
T Consensus       156 ~~--~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~el~~g~~pf~~~~~~~~~~~~~~---------~~~~~---~  221 (285)
T cd05605         156 ET--IRGRVGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIEGKSPFRQRKEKVKREEVER---------RVKED---Q  221 (285)
T ss_pred             Cc--cccccCCCCccCcHHhcCCCCCccccchhHHHHHHHHHHCCCCCCCCchhhHHHHHHH---------Hhhhc---c
Confidence            22  1234789999999999888899999999999999999999999986432111 11111         11110   1


Q ss_pred             CCCCHHHHHHHHHHHHHcCCCCCCCCC-----CHHHHHHH
Q 005257          601 GGFDEDEVERVLHLGLLCAYPDPRARP-----TMRQVVKV  635 (705)
Q Consensus       601 ~~~~~~~~~~l~~l~~~Cl~~dP~~RP-----s~~evl~~  635 (705)
                      ..++......+.+++..||+.||++||     ++.+++++
T Consensus       222 ~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~  261 (285)
T cd05605         222 EEYSEKFSEAARSICRQLLTKDPGFRLGCRGEGAEEVKAH  261 (285)
T ss_pred             cccCcccCHHHHHHHHHHccCCHHHhcCCCCCCHHHHhcC
Confidence            223334456788999999999999999     77777664

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,

>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

Probab=100.00  E-value=1.3e-37  Score=327.37  Aligned_cols=264  Identities=24%  Similarity=0.361  Sum_probs=196.8

Q ss_pred             CCCCcceEEeecCceEEEEEEEcC-CCeEEEEEEeccCC--chhHHHHHHHHHHhccC---CCCCcceeeeeeee----c
Q 005257          364 KGFSEENVIGVGGNGKVYKGVLEG-GGAEIAVKRISHEN--DGGTRAFLAEISSLGRL---KHKSLVGLRGWCKR----E  433 (705)
Q Consensus       364 ~~f~~~~~LG~G~fg~Vy~~~~~~-~~~~vavK~i~~~~--~~~~~~~~~Ei~~l~~l---~Hpniv~l~g~~~~----~  433 (705)
                      ++|...+.||+|+||.||+|.+.. ++..||+|+++...  ......+.+|+.+++.+   +||||++++++|..    .
T Consensus         1 ~~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~~   80 (290)
T cd07862           1 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDR   80 (290)
T ss_pred             CCcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCCC
Confidence            368889999999999999999853 46889999886542  22334566777776665   69999999998852    2


Q ss_pred             cCceEEEEeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeec
Q 005257          434 KGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFG  513 (705)
Q Consensus       434 ~~~~~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFG  513 (705)
                      ...+++||||++ ++|.+++...... .+++.++..++.|++.||.|||+   .+|+||||||+|||++.++.+||+|||
T Consensus        81 ~~~~~lv~e~~~-~~l~~~~~~~~~~-~~~~~~~~~i~~qi~~aL~~lH~---~~iiH~dlkp~Nil~~~~~~~kl~Dfg  155 (290)
T cd07862          81 ETKLTLVFEHVD-QDLTTYLDKVPEP-GVPTETIKDMMFQLLRGLDFLHS---HRVVHRDLKPQNILVTSSGQIKLADFG  155 (290)
T ss_pred             CCcEEEEEccCC-CCHHHHHHhCCCC-CCCHHHHHHHHHHHHHHHHHHHH---CCeeeCCCCHHHEEEcCCCCEEEcccc
Confidence            456899999996 6999998764433 58999999999999999999998   999999999999999999999999999


Q ss_pred             cceecCCCCcceeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhhCCCCCCCCCcc-HHHHHHHHHHhC---ch
Q 005257          514 LARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPN-LVEMVWELMVQG---KL  589 (705)
Q Consensus       514 la~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~-~~~~v~~~~~~~---~~  589 (705)
                      +++......  ......||+.|+|||++.+..++.++|||||||++|||++|+.||...... ....+.+.....   ..
T Consensus       156 ~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~i~~~~~~~~~~~~  233 (290)
T cd07862         156 LARIYSFQM--ALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDW  233 (290)
T ss_pred             ceEeccCCc--ccccccccccccChHHHhCCCCCCccchHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhc
Confidence            998765432  223457899999999998888999999999999999999999999764321 111111110000   00


Q ss_pred             hHHH---HHhhhcCCC-----CCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHH
Q 005257          590 LDAL---DARLRAKGG-----FDEDEVERVLHLGLLCAYPDPRARPTMRQVVK  634 (705)
Q Consensus       590 ~~~i---d~~l~~~~~-----~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~  634 (705)
                      ...+   ...+.....     ........+.+++.+|++.||++|||+.|+++
T Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~  286 (290)
T cd07862         234 PRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS  286 (290)
T ss_pred             hhhhcccchhccCCCCCCHHHHccCCCHHHHHHHHHHhccCchhcCCHHHHhc
Confidence            0000   000000000     00112355789999999999999999999986

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla

>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

Probab=100.00  E-value=2.6e-38  Score=327.28  Aligned_cols=255  Identities=27%  Similarity=0.478  Sum_probs=209.9

Q ss_pred             hCCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCCchhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEEEEe
Q 005257          363 TKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYD  442 (705)
Q Consensus       363 t~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~lV~E  442 (705)
                      ..+|...++||.|+||.||+|.... +..+|+|.+..........+.+|+.+++.++||||+++++++.. ....++|||
T Consensus         5 ~~~y~~~~~ig~g~~~~vy~~~~~~-~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~~lv~e   82 (261)
T cd05148           5 REEFTLERKLGSGYFGEVWEGLWKN-RVRVAIKILKSDDLLKQQDFQKEVQALKRLRHKHLISLFAVCSV-GEPVYIITE   82 (261)
T ss_pred             HHHHHHhhhhccCCCccEEEeEecC-CCcEEEEeccccchhhHHHHHHHHHHHhcCCCcchhheeeeEec-CCCeEEEEe
Confidence            4567788999999999999999987 78899999977666567789999999999999999999998876 668899999


Q ss_pred             eCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecCCCC
Q 005257          443 YMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQ  522 (705)
Q Consensus       443 ~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~~~~  522 (705)
                      |+++++|.+++.+... ..+++.++..++.|++.||.|||+   ++++|+||||+||++++++.+||+|||++.......
T Consensus        83 ~~~~~~L~~~~~~~~~-~~~~~~~~~~~~~~i~~al~~lH~---~~i~h~dl~~~nilv~~~~~~kl~d~g~~~~~~~~~  158 (261)
T cd05148          83 LMEKGSLLAFLRSPEG-QVLPVASLIDMACQVAEGMAYLEE---QNSIHRDLAARNILVGEDLVCKVADFGLARLIKEDV  158 (261)
T ss_pred             ecccCCHHHHHhcCCC-CCCCHHHHHHHHHHHHHHHHHHHH---CCeeccccCcceEEEcCCceEEEccccchhhcCCcc
Confidence            9999999999976543 368999999999999999999998   999999999999999999999999999997664332


Q ss_pred             cceeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhh-CCCCCCCCCccHHHHHHHHHHhCchhHHHHHhhhcCC
Q 005257          523 VASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLS-GRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRAKG  601 (705)
Q Consensus       523 ~~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~Ellt-G~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~l~~~~  601 (705)
                      ... ....++..|+|||.+.+..++.++||||||+++|||++ |+.||......   .....+.         ....  .
T Consensus       159 ~~~-~~~~~~~~~~~PE~~~~~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~~~---~~~~~~~---------~~~~--~  223 (261)
T cd05148         159 YLS-SDKKIPYKWTAPEAASHGTFSTKSDVWSFGILLYEMFTYGQVPYPGMNNH---EVYDQIT---------AGYR--M  223 (261)
T ss_pred             ccc-cCCCCceEecCHHHHccCCCCchhhHHHHHHHHHHHHcCCCCCCCcCCHH---HHHHHHH---------hCCc--C
Confidence            211 12345678999999988889999999999999999998 89999754321   1111111         1111  1


Q ss_pred             CCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHh
Q 005257          602 GFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLEG  638 (705)
Q Consensus       602 ~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  638 (705)
                      ..+....+.+.+++.+||+.||++|||++++++.|+.
T Consensus       224 ~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~l~~~L~~  260 (261)
T cd05148         224 PCPAKCPQEIYKIMLECWAAEPEDRPSFKALREELDN  260 (261)
T ss_pred             CCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHhc
Confidence            1223445678899999999999999999999999974

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom

>PTZ00267 NIMA-related protein kinase; Provisional

Probab=100.00  E-value=8.8e-38  Score=352.09  Aligned_cols=252  Identities=22%  Similarity=0.316  Sum_probs=206.1

Q ss_pred             CCCcceEEeecCceEEEEEEEcCC-CeEEEEEEeccCCchhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEEEEee
Q 005257          365 GFSEENVIGVGGNGKVYKGVLEGG-GAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDY  443 (705)
Q Consensus       365 ~f~~~~~LG~G~fg~Vy~~~~~~~-~~~vavK~i~~~~~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~lV~E~  443 (705)
                      .|...+.||+|+||.||+|....+ +..||+|.+..........+.+|+.+++.++||||+++++++.. ++.++|||||
T Consensus        68 ~y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~-~~~~~lv~E~  146 (478)
T PTZ00267         68 MYVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLNDERQAAYARSELHCLAACDHFGIVKHFDDFKS-DDKLLLIMEY  146 (478)
T ss_pred             eEEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEE-CCEEEEEEEC
Confidence            488899999999999999998776 78899998765555555678889999999999999999999876 6789999999


Q ss_pred             CCCCChhHHHHhc-CCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecCCCC
Q 005257          444 MENGSLDKWIFQC-DGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQ  522 (705)
Q Consensus       444 ~~~gsL~~~L~~~-~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~~~~  522 (705)
                      +++|+|.++|.+. .....+++.++..++.|++.||.|||+   ++|+||||||+|||++.++.+||+|||+++......
T Consensus       147 ~~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~---~~ivHrDlkp~NIll~~~~~~kL~DFgla~~~~~~~  223 (478)
T PTZ00267        147 GSGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHS---RKMMHRDLKSANIFLMPTGIIKLGDFGFSKQYSDSV  223 (478)
T ss_pred             CCCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHh---CCEEECCcCHHhEEECCCCcEEEEeCcCceecCCcc
Confidence            9999999988653 223368999999999999999999998   999999999999999999999999999998765432


Q ss_pred             c-ceeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhHHHHHhhhcCC
Q 005257          523 V-ASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRAKG  601 (705)
Q Consensus       523 ~-~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~l~~~~  601 (705)
                      . ......+||+.|+|||++.+..++.++|||||||++|||++|+.||.....  .+ +......+..           .
T Consensus       224 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~Pf~~~~~--~~-~~~~~~~~~~-----------~  289 (478)
T PTZ00267        224 SLDVASSFCGTPYYLAPELWERKRYSKKADMWSLGVILYELLTLHRPFKGPSQ--RE-IMQQVLYGKY-----------D  289 (478)
T ss_pred             ccccccccCCCccccCHhHhCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCH--HH-HHHHHHhCCC-----------C
Confidence            2 123345799999999999988999999999999999999999999975432  11 1111111111           1


Q ss_pred             CCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHH
Q 005257          602 GFDEDEVERVLHLGLLCAYPDPRARPTMRQVVK  634 (705)
Q Consensus       602 ~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~  634 (705)
                      ..+......+.+++..||+.||++||++.+++.
T Consensus       290 ~~~~~~s~~~~~li~~~L~~dP~~Rps~~~~l~  322 (478)
T PTZ00267        290 PFPCPVSSGMKALLDPLLSKNPALRPTTQQLLH  322 (478)
T ss_pred             CCCccCCHHHHHHHHHHhccChhhCcCHHHHHh
Confidence            112233456889999999999999999999875

>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

Probab=100.00  E-value=1e-37  Score=333.13  Aligned_cols=242  Identities=24%  Similarity=0.390  Sum_probs=193.7

Q ss_pred             eEEeecCceEEEEEEEcCCCeEEEEEEeccCC---chhHHHHHHHHHHhccC-CCCCcceeeeeeeeccCceEEEEeeCC
Q 005257          370 NVIGVGGNGKVYKGVLEGGGAEIAVKRISHEN---DGGTRAFLAEISSLGRL-KHKSLVGLRGWCKREKGSLMLVYDYME  445 (705)
Q Consensus       370 ~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~---~~~~~~~~~Ei~~l~~l-~Hpniv~l~g~~~~~~~~~~lV~E~~~  445 (705)
                      +.||+|+||.||+|.+..+++.||||+++...   ....+.+..|..++..+ +||||+++++++.. +..+++||||++
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~-~~~~~lv~e~~~   79 (316)
T cd05592           1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQT-KEHLFFVMEYLN   79 (316)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEc-CCEEEEEEcCCC
Confidence            46999999999999999999999999987542   23344566677777654 89999999998876 678999999999


Q ss_pred             CCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecCCCCcce
Q 005257          446 NGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVAS  525 (705)
Q Consensus       446 ~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~~~~~~~  525 (705)
                      +|+|..++....   .+++.++..++.|++.||.|||+   .+|+||||||+|||++.++.+||+|||+++...... ..
T Consensus        80 gg~L~~~~~~~~---~~~~~~~~~~~~qi~~al~~LH~---~~ivH~dlkp~Nill~~~~~~kL~Dfg~a~~~~~~~-~~  152 (316)
T cd05592          80 GGDLMFHIQSSG---RFDEARARFYAAEIICGLQFLHK---KGIIYRDLKLDNVLLDKDGHIKIADFGMCKENMNGE-GK  152 (316)
T ss_pred             CCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHH---CCEEeCCCCHHHeEECCCCCEEEccCcCCeECCCCC-Cc
Confidence            999999886543   58999999999999999999998   999999999999999999999999999998653322 22


Q ss_pred             eeeeeccccCCCccccccCCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhHHHHHhhhcCCCCCH
Q 005257          526 TTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRAKGGFDE  605 (705)
Q Consensus       526 ~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~l~~~~~~~~  605 (705)
                      .....||+.|+|||++.+..++.++|||||||++|||++|+.||......   .+...+...            ...++.
T Consensus       153 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~G~~Pf~~~~~~---~~~~~i~~~------------~~~~~~  217 (316)
T cd05592         153 ASTFCGTPDYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPFHGEDED---ELFDSILND------------RPHFPR  217 (316)
T ss_pred             cccccCCccccCHHHHcCCCCCCcccchhHHHHHHHHHhCCCCCCCCCHH---HHHHHHHcC------------CCCCCC
Confidence            33457999999999999888999999999999999999999999764421   111111111            122223


Q ss_pred             HHHHHHHHHHHHcCCCCCCCCCCHH-HHHH
Q 005257          606 DEVERVLHLGLLCAYPDPRARPTMR-QVVK  634 (705)
Q Consensus       606 ~~~~~l~~l~~~Cl~~dP~~RPs~~-evl~  634 (705)
                      .....+.+++..||+.||++||++. ++++
T Consensus       218 ~~~~~~~~ll~~~l~~~P~~R~~~~~~l~~  247 (316)
T cd05592         218 WISKEAKDCLSKLFERDPTKRLGVDGDIRQ  247 (316)
T ss_pred             CCCHHHHHHHHHHccCCHHHcCCChHHHHc
Confidence            3345678899999999999999975 4433

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp

>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2

Probab=100.00  E-value=1.4e-37  Score=340.89  Aligned_cols=253  Identities=21%  Similarity=0.301  Sum_probs=197.6

Q ss_pred             CCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccC---CchhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEEEE
Q 005257          365 GFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHE---NDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVY  441 (705)
Q Consensus       365 ~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~---~~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~lV~  441 (705)
                      .|...+.||+|+||+||+|.+..+++.||||++...   .....+.+.+|++++.+++||||+++++.+.+ .+.+++||
T Consensus         2 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~-~~~~~lv~   80 (381)
T cd05626           2 MFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQD-KDNLYFVM   80 (381)
T ss_pred             CceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEec-CCEEEEEE
Confidence            578889999999999999999999999999999654   23345678999999999999999999998876 67899999


Q ss_pred             eeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecCCC
Q 005257          442 DYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHG  521 (705)
Q Consensus       442 E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~~~  521 (705)
                      ||+++|+|.+++.+..   .+++..+..++.|++.||.|||+   .+|+||||||+|||++.++.+||+|||+++.....
T Consensus        81 E~~~gg~L~~~l~~~~---~~~e~~~~~~~~qi~~aL~~LH~---~givHrDlKp~Nili~~~~~~kL~DFGl~~~~~~~  154 (381)
T cd05626          81 DYIPGGDMMSLLIRME---VFPEVLARFYIAELTLAIESVHK---MGFIHRDIKPDNILIDLDGHIKLTDFGLCTGFRWT  154 (381)
T ss_pred             ecCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHh---CCeeecCCcHHHEEECCCCCEEEeeCcCCcccccc
Confidence            9999999999997543   58899999999999999999998   99999999999999999999999999997543110


Q ss_pred             Cc----------------------------------------------ceeeeeeccccCCCccccccCCCCccccEEEE
Q 005257          522 QV----------------------------------------------ASTTRVVGTVGYLAPEVFSSGRASTQTDVFGF  555 (705)
Q Consensus       522 ~~----------------------------------------------~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~  555 (705)
                      ..                                              ......+||+.|+|||++.+..++.++|||||
T Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSl  234 (381)
T cd05626         155 HNSKYYQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRKGYTQLCDWWSV  234 (381)
T ss_pred             cccccccccccccccccCcccccccccccccccccchhhccccccccccccccccCCccccCHHHHcCCCCCCccceeeh
Confidence            00                                              00123579999999999988889999999999


Q ss_pred             ehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhHHHHHhhhcCCCCCHHHHHHHHHHHHH--cCCCCCCCCCCHHHHH
Q 005257          556 GILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRAKGGFDEDEVERVLHLGLL--CAYPDPRARPTMRQVV  633 (705)
Q Consensus       556 Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~l~~~~~~~~~~~~~l~~l~~~--Cl~~dP~~RPs~~evl  633 (705)
                      ||++|||++|+.||.......  ...........     ........++    ..+.+++.+  |+.++|..||++.+++
T Consensus       235 G~il~elltG~~Pf~~~~~~~--~~~~i~~~~~~-----~~~~~~~~~s----~~~~dli~~ll~~~~~~~~R~~~~~~l  303 (381)
T cd05626         235 GVILFEMLVGQPPFLAPTPTE--TQLKVINWENT-----LHIPPQVKLS----PEAVDLITKLCCSAEERLGRNGADDIK  303 (381)
T ss_pred             hhHHHHHHhCCCCCcCCCHHH--HHHHHHccccc-----cCCCCCCCCC----HHHHHHHHHHccCcccccCCCCHHHHh
Confidence            999999999999997654321  11111100000     0011001122    334455544  6677888899999998


Q ss_pred             HH
Q 005257          634 KV  635 (705)
Q Consensus       634 ~~  635 (705)
                      ++
T Consensus       304 ~h  305 (381)
T cd05626         304 AH  305 (381)
T ss_pred             cC
Confidence            75

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po

>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

Probab=100.00  E-value=1.8e-37  Score=333.30  Aligned_cols=240  Identities=24%  Similarity=0.356  Sum_probs=193.6

Q ss_pred             eEEeecCceEEEEEEEcCCCeEEEEEEeccC---CchhHHHHHHHHHHhccC-CCCCcceeeeeeeeccCceEEEEeeCC
Q 005257          370 NVIGVGGNGKVYKGVLEGGGAEIAVKRISHE---NDGGTRAFLAEISSLGRL-KHKSLVGLRGWCKREKGSLMLVYDYME  445 (705)
Q Consensus       370 ~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~---~~~~~~~~~~Ei~~l~~l-~Hpniv~l~g~~~~~~~~~~lV~E~~~  445 (705)
                      +.||+|+||.||++....+++.||+|+++..   .....+.+.+|+.++.++ +||||+++++++.. .+..++||||++
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~-~~~~~lv~E~~~   79 (329)
T cd05618           1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQT-ESRLFFVIEYVN   79 (329)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEe-CCEEEEEEeCCC
Confidence            4699999999999999999999999999754   233455678899888777 89999999998776 678999999999


Q ss_pred             CCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecCCCCcce
Q 005257          446 NGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVAS  525 (705)
Q Consensus       446 ~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~~~~~~~  525 (705)
                      +|+|..++....   .+++..+..++.|++.||.|||+   ++|+||||||+|||++.++.+||+|||+++....... .
T Consensus        80 ~~~L~~~~~~~~---~l~~~~~~~i~~qi~~~l~~lH~---~~ivH~Dikp~Nili~~~~~~kL~DfG~~~~~~~~~~-~  152 (329)
T cd05618          80 GGDLMFHMQRQR---KLPEEHARFYSAEISLALNYLHE---RGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGD-T  152 (329)
T ss_pred             CCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHH---CCeeeCCCCHHHEEECCCCCEEEeeCCccccccCCCC-c
Confidence            999998886543   68999999999999999999998   9999999999999999999999999999975432221 2


Q ss_pred             eeeeeccccCCCccccccCCCCccccEEEEehhHHHHhhCCCCCCCCC------ccHHHHHHHHHHhCchhHHHHHhhhc
Q 005257          526 TTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGK------PNLVEMVWELMVQGKLLDALDARLRA  599 (705)
Q Consensus       526 ~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~------~~~~~~v~~~~~~~~~~~~id~~l~~  599 (705)
                      .....||+.|+|||++.+..++.++|||||||++|||++|+.||....      ....+++.+.+..+.           
T Consensus       153 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~-----------  221 (329)
T cd05618         153 TSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQ-----------  221 (329)
T ss_pred             cccccCCccccCHHHHcCCCCCCccceecccHHHHHHhhCCCCCccCCCcCCcccccHHHHHHHHhcCC-----------
Confidence            234578999999999999899999999999999999999999995311      111222222222211           


Q ss_pred             CCCCCHHHHHHHHHHHHHcCCCCCCCCCCH
Q 005257          600 KGGFDEDEVERVLHLGLLCAYPDPRARPTM  629 (705)
Q Consensus       600 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~  629 (705)
                       ..++......+.+++..||+.||++||++
T Consensus       222 -~~~p~~~~~~~~~ll~~~L~~dP~~R~~~  250 (329)
T cd05618         222 -IRIPRSLSVKAASVLKSFLNKDPKERLGC  250 (329)
T ss_pred             -CCCCCCCCHHHHHHHHHHhcCCHHHcCCC
Confidence             12233344567899999999999999984

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o

>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=1.3e-38  Score=306.66  Aligned_cols=250  Identities=22%  Similarity=0.332  Sum_probs=210.6

Q ss_pred             hCCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccC---CchhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEE
Q 005257          363 TKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHE---NDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLML  439 (705)
Q Consensus       363 t~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~---~~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~l  439 (705)
                      -++|+..+.||+|-||.||.|+.+.++-.||+|++.+.   ..+..+++.+|+++-+.|+||||+++++++.+ ....||
T Consensus        21 l~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~fhd-~~riyL   99 (281)
T KOG0580|consen   21 LDDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGYFHD-SKRIYL   99 (281)
T ss_pred             hhhccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhheec-cceeEE
Confidence            35688899999999999999999999999999998654   23345678999999999999999999999987 668999


Q ss_pred             EEeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecC
Q 005257          440 VYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHG  519 (705)
Q Consensus       440 V~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~  519 (705)
                      ++||.++|+|...|...... .+++.....++.|+|.||.|+|.   ++||||||||+|+|++..+.+||+|||-+....
T Consensus       100 ilEya~~gel~k~L~~~~~~-~f~e~~~a~Yi~q~A~Al~y~h~---k~VIhRdiKpenlLlg~~~~lkiAdfGwsV~~p  175 (281)
T KOG0580|consen  100 ILEYAPRGELYKDLQEGRMK-RFDEQRAATYIKQLANALLYCHL---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAP  175 (281)
T ss_pred             EEEecCCchHHHHHHhcccc-cccccchhHHHHHHHHHHHHhcc---CCcccCCCCHHHhccCCCCCeeccCCCceeecC
Confidence            99999999999999854433 68899999999999999999998   999999999999999999999999999987644


Q ss_pred             CCCcceeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhHHHHHhhhc
Q 005257          520 HGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRA  599 (705)
Q Consensus       520 ~~~~~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~l~~  599 (705)
                      .   ......+||..|.+||...+..++..+|+|++|++.||++.|.+||......   .....+.            +.
T Consensus       176 ~---~kR~tlcgt~dyl~pEmv~~~~hd~~Vd~w~lgvl~yeflvg~ppFes~~~~---etYkrI~------------k~  237 (281)
T KOG0580|consen  176 S---NKRKTLCGTLDYLPPEMVEGRGHDKFVDLWSLGVLCYEFLVGLPPFESQSHS---ETYKRIR------------KV  237 (281)
T ss_pred             C---CCceeeecccccCCHhhcCCCCccchhhHHHHHHHHHHHHhcCCchhhhhhH---HHHHHHH------------Hc
Confidence            2   2334579999999999999999999999999999999999999999764321   1111111            11


Q ss_pred             CCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 005257          600 KGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKV  635 (705)
Q Consensus       600 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  635 (705)
                      +-.++........+++..|+..+|.+|.+..|++.+
T Consensus       238 ~~~~p~~is~~a~dlI~~ll~~~p~~r~~l~~v~~h  273 (281)
T KOG0580|consen  238 DLKFPSTISGGAADLISRLLVKNPIERLALTEVMDH  273 (281)
T ss_pred             cccCCcccChhHHHHHHHHhccCccccccHHHHhhh
Confidence            122334455678899999999999999999999875

>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

Probab=100.00  E-value=1e-37  Score=334.41  Aligned_cols=245  Identities=26%  Similarity=0.359  Sum_probs=195.6

Q ss_pred             CCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCC---chhHHHHHHHHHH---hccCCCCCcceeeeeeeeccCceEE
Q 005257          366 FSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHEN---DGGTRAFLAEISS---LGRLKHKSLVGLRGWCKREKGSLML  439 (705)
Q Consensus       366 f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~---~~~~~~~~~Ei~~---l~~l~Hpniv~l~g~~~~~~~~~~l  439 (705)
                      |...+.||+|+||.||+|.+..+++.||||+++...   ....+.+.+|+++   ++.++||||+++++++.. ++..++
T Consensus         1 y~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~-~~~~~l   79 (324)
T cd05589           1 FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQT-EDHVCF   79 (324)
T ss_pred             CeEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEc-CCEEEE
Confidence            567889999999999999999899999999997542   2234556666655   467789999999998875 678999


Q ss_pred             EEeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecC
Q 005257          440 VYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHG  519 (705)
Q Consensus       440 V~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~  519 (705)
                      ||||+++|+|..++..    ..+++.++..++.|++.||.|||+   .+|+||||||+|||++.++.+||+|||+++...
T Consensus        80 v~E~~~~~~L~~~~~~----~~l~~~~~~~~~~qi~~al~~lH~---~~ivHrdlkp~Nill~~~~~~kL~Dfg~~~~~~  152 (324)
T cd05589          80 VMEYAAGGDLMMHIHT----DVFSEPRAVFYAACVVLGLQYLHE---NKIVYRDLKLDNLLLDTEGFVKIADFGLCKEGM  152 (324)
T ss_pred             EEcCCCCCcHHHHhhc----CCCCHHHHHHHHHHHHHHHHHHHh---CCeEecCCCHHHeEECCCCcEEeCcccCCccCC
Confidence            9999999999988753    268999999999999999999998   999999999999999999999999999987543


Q ss_pred             CCCcceeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhHHHHHhhhc
Q 005257          520 HGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRA  599 (705)
Q Consensus       520 ~~~~~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~l~~  599 (705)
                      ... .......|++.|||||.+.+..++.++|||||||++|||++|+.||......   .+...+..+.           
T Consensus       153 ~~~-~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~G~~pf~~~~~~---~~~~~i~~~~-----------  217 (324)
T cd05589         153 GFG-DRTSTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGESPFPGDDEE---EVFDSIVNDE-----------  217 (324)
T ss_pred             CCC-CcccccccCccccCHhHhcCCCCCcccchhhHHHHHHHHHhCCCCCCCCCHH---HHHHHHHhCC-----------
Confidence            222 1223467999999999999889999999999999999999999999764421   1111111111           


Q ss_pred             CCCCCHHHHHHHHHHHHHcCCCCCCCCC-----CHHHHHH
Q 005257          600 KGGFDEDEVERVLHLGLLCAYPDPRARP-----TMRQVVK  634 (705)
Q Consensus       600 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RP-----s~~evl~  634 (705)
                       ..++......+.+++.+||+.||.+||     ++.++++
T Consensus       218 -~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~l~~  256 (324)
T cd05589         218 -VRYPRFLSREAISIMRRLLRRNPERRLGSGEKDAEDVKK  256 (324)
T ss_pred             -CCCCCCCCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhh
Confidence             112223345678899999999999999     4666655

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved

>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

Probab=100.00  E-value=7.5e-38  Score=323.19  Aligned_cols=251  Identities=27%  Similarity=0.444  Sum_probs=201.6

Q ss_pred             CCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCCchhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEEEEee
Q 005257          364 KGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDY  443 (705)
Q Consensus       364 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~lV~E~  443 (705)
                      ++|...+.||+|+||.||++.++. +..+|+|.+... ....+++.+|+.++++++||||+++++++.. +...++||||
T Consensus         4 ~~~~~~~~lg~G~~~~vy~~~~~~-~~~~a~K~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~iv~e~   80 (256)
T cd05114           4 SELTFMKELGSGQFGVVHLGKWRA-QIKVAIKAINEG-AMSEEDFIEEAKVMMKLSHPKLVQLYGVCTQ-QKPLYIVTEF   80 (256)
T ss_pred             HHcEEeeEecCCcCceEEEEEecc-CceEEEEecccC-CccHHHHHHHHHHHHHCCCCCceeEEEEEcc-CCCEEEEEEc
Confidence            347778899999999999998864 567999987643 2335678999999999999999999998876 6788999999


Q ss_pred             CCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecCCCCc
Q 005257          444 MENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQV  523 (705)
Q Consensus       444 ~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~~~~~  523 (705)
                      +++|+|.+++.....  .+++..+..++.|++.||.|||+   .+++||||||+||++++++.+||+|||+++.......
T Consensus        81 ~~~~~L~~~~~~~~~--~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dl~p~ni~i~~~~~~kl~d~g~~~~~~~~~~  155 (256)
T cd05114          81 MENGCLLNYLRQRQG--KLSKDMLLSMCQDVCEGMEYLER---NSFIHRDLAARNCLVSSTGVVKVSDFGMTRYVLDDEY  155 (256)
T ss_pred             CCCCcHHHHHHhCcc--CCCHHHHHHHHHHHHHHHHHHHH---CCccccccCcceEEEcCCCeEEECCCCCccccCCCce
Confidence            999999999875432  58999999999999999999998   9999999999999999999999999999986543332


Q ss_pred             ceeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhh-CCCCCCCCCccHHHHHHHHHHhCchhHHHHHhhhcCCC
Q 005257          524 ASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLS-GRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRAKGG  602 (705)
Q Consensus       524 ~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~Ellt-G~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~l~~~~~  602 (705)
                      .......++..|+|||++.+..++.++||||||+++|||++ |+.||......  +. .....++..           ..
T Consensus       156 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~~~--~~-~~~i~~~~~-----------~~  221 (256)
T cd05114         156 TSSSGAKFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKSNY--EV-VEMISRGFR-----------LY  221 (256)
T ss_pred             eccCCCCCchhhCChhhcccCccchhhhhHHHHHHHHHHHcCCCCCCCCCCHH--HH-HHHHHCCCC-----------CC
Confidence            22222345678999999988889999999999999999999 89999764421  11 111221111           01


Q ss_pred             CCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Q 005257          603 FDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVL  636 (705)
Q Consensus       603 ~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L  636 (705)
                      .+......+.+++.+||+.+|++||++.++++.|
T Consensus       222 ~~~~~~~~~~~li~~c~~~~p~~Rps~~~l~~~l  255 (256)
T cd05114         222 RPKLASMTVYEVMYSCWHEKPEGRPTFAELLRAI  255 (256)
T ss_pred             CCCCCCHHHHHHHHHHccCCcccCcCHHHHHHhh
Confidence            1122345689999999999999999999999876

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h

>PHA03212 serine/threonine kinase US3; Provisional

Probab=100.00  E-value=2.1e-37  Score=340.00  Aligned_cols=286  Identities=18%  Similarity=0.241  Sum_probs=214.2

Q ss_pred             hCCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCCchhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEEEEe
Q 005257          363 TKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYD  442 (705)
Q Consensus       363 t~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~lV~E  442 (705)
                      .++|+..+.||+|+||.||++.+..+++.||+|...      .+.+.+|++++++|+||||+++++++.. +...++|+|
T Consensus        91 ~~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~------~~~~~~E~~il~~l~HpnIv~~~~~~~~-~~~~~lv~e  163 (391)
T PHA03212         91 KAGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQ------RGGTATEAHILRAINHPSIIQLKGTFTY-NKFTCLILP  163 (391)
T ss_pred             cCCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechh------hhhhHHHHHHHHhCCCCCCCCEeEEEEE-CCeeEEEEe
Confidence            357999999999999999999999999999999753      2456889999999999999999998876 668899999


Q ss_pred             eCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecCCCC
Q 005257          443 YMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQ  522 (705)
Q Consensus       443 ~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~~~~  522 (705)
                      ++. ++|..++....   .+++.+++.++.|++.||.|||+   ++|+||||||+|||++.++.+||+|||+++......
T Consensus       164 ~~~-~~L~~~l~~~~---~l~~~~~~~i~~qi~~aL~ylH~---~~IvHrDiKP~NIll~~~~~vkL~DFG~a~~~~~~~  236 (391)
T PHA03212        164 RYK-TDLYCYLAAKR---NIAICDILAIERSVLRAIQYLHE---NRIIHRDIKAENIFINHPGDVCLGDFGAACFPVDIN  236 (391)
T ss_pred             cCC-CCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCChHhEEEcCCCCEEEEeCCccccccccc
Confidence            995 68888886532   58999999999999999999998   899999999999999999999999999997543322


Q ss_pred             cceeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhhCCCCCCCCCcc-----HHHHHHHHHHhCchhHHHHHhh
Q 005257          523 VASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPN-----LVEMVWELMVQGKLLDALDARL  597 (705)
Q Consensus       523 ~~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~-----~~~~v~~~~~~~~~~~~id~~l  597 (705)
                      ........||+.|+|||++.+..++.++|||||||++|||++|+.|+......     ....+          ..+...+
T Consensus       237 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~p~~~~~~~~~~~~~~~~l----------~~i~~~~  306 (391)
T PHA03212        237 ANKYYGWAGTIATNAPELLARDPYGPAVDIWSAGIVLFEMATCHDSLFEKDGLDGDCDSDRQI----------KLIIRRS  306 (391)
T ss_pred             ccccccccCccCCCChhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCcCCcccccccCchhHHH----------HHHHHHh
Confidence            22333467999999999999889999999999999999999999887543210     00000          0000000


Q ss_pred             hc-CCCCC---HHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHhccccCCCCCcchhhHHHHHHhhccccccccccccc
Q 005257          598 RA-KGGFD---EDEVERVLHLGLLCAYPDPRARPTMRQVVKVLEGKIEAGIENETEDMDAYLLQQVKSKDMWANYSRSFG  673 (705)
Q Consensus       598 ~~-~~~~~---~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~  673 (705)
                      .. ...++   ......+..-...+....|..||....+..                .+..+.+++.++..++|..|.++
T Consensus       307 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------~~~~l~~Li~~mL~~dP~~Rpta  370 (391)
T PHA03212        307 GTHPNEFPIDAQANLDEIYIGLAKKSSRKPGSRPLWTNLYE----------------LPIDLEYLICKMLAFDAHHRPSA  370 (391)
T ss_pred             cCChhhcCcchhHHHHHHHHHHHhccCCCCCCCCCHHHHhh----------------hhhhHHHHHHHHhcCChhhCCCH
Confidence            00 00011   111122222223344556777776554332                12234556777888999999999


Q ss_pred             cCCCCCCCccccccc
Q 005257          674 YGYATHPTFHDIRQS  688 (705)
Q Consensus       674 ~~~~~hp~f~~~~~~  688 (705)
                      .+++.||||.++...
T Consensus       371 ~elL~hp~f~~~~~~  385 (391)
T PHA03212        371 EALLDFAAFQDIPDP  385 (391)
T ss_pred             HHHhcChhhccCCCC
Confidence            999999999876543

>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

Probab=100.00  E-value=8.4e-38  Score=334.47  Aligned_cols=237  Identities=24%  Similarity=0.367  Sum_probs=193.9

Q ss_pred             eEEeecCceEEEEEEEcCCCeEEEEEEeccC---CchhHHHHHHHHHHhccC-CCCCcceeeeeeeeccCceEEEEeeCC
Q 005257          370 NVIGVGGNGKVYKGVLEGGGAEIAVKRISHE---NDGGTRAFLAEISSLGRL-KHKSLVGLRGWCKREKGSLMLVYDYME  445 (705)
Q Consensus       370 ~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~---~~~~~~~~~~Ei~~l~~l-~Hpniv~l~g~~~~~~~~~~lV~E~~~  445 (705)
                      +.||+|+||.||+|.++.+++.||||++...   .....+.+..|..++..+ +||||+++++++.. .+.+++||||++
T Consensus         1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~-~~~~~iv~Ey~~   79 (320)
T cd05590           1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQT-PDRLFFVMEFVN   79 (320)
T ss_pred             CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEc-CCEEEEEEcCCC
Confidence            4699999999999999989999999998653   233456678888888876 69999999998765 678999999999


Q ss_pred             CCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecCCCCcce
Q 005257          446 NGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVAS  525 (705)
Q Consensus       446 ~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~~~~~~~  525 (705)
                      +|+|.+++.+..   .+++..+..++.|++.||.|||+   ++|+||||||+|||++.++.+||+|||+++....... .
T Consensus        80 ~g~L~~~i~~~~---~l~~~~~~~~~~ql~~~L~~lH~---~~ivH~dlkp~NIli~~~~~~kL~DfG~~~~~~~~~~-~  152 (320)
T cd05590          80 GGDLMFHIQKSR---RFDEARARFYAAEITSALMFLHD---KGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGIFNGK-T  152 (320)
T ss_pred             CchHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHH---CCeEeCCCCHHHeEECCCCcEEEeeCCCCeecCcCCC-c
Confidence            999999887543   68999999999999999999998   9999999999999999999999999999875432221 2


Q ss_pred             eeeeeccccCCCccccccCCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhHHHHHhhhcCCCCCH
Q 005257          526 TTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRAKGGFDE  605 (705)
Q Consensus       526 ~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~l~~~~~~~~  605 (705)
                      .....||+.|+|||++.+..++.++|||||||++|||++|+.||......   ...+.+..+.            ..++.
T Consensus       153 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~---~~~~~i~~~~------------~~~~~  217 (320)
T cd05590         153 TSTFCGTPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEAENED---DLFEAILNDE------------VVYPT  217 (320)
T ss_pred             ccccccCccccCHHHHcCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHH---HHHHHHhcCC------------CCCCC
Confidence            23357999999999999888999999999999999999999999765421   1222222221            11222


Q ss_pred             HHHHHHHHHHHHcCCCCCCCCCCH
Q 005257          606 DEVERVLHLGLLCAYPDPRARPTM  629 (705)
Q Consensus       606 ~~~~~l~~l~~~Cl~~dP~~RPs~  629 (705)
                      .....+.+++..|++.||++||++
T Consensus       218 ~~~~~~~~li~~~L~~dP~~R~~~  241 (320)
T cd05590         218 WLSQDAVDILKAFMTKNPTMRLGS  241 (320)
T ss_pred             CCCHHHHHHHHHHcccCHHHCCCC
Confidence            234567889999999999999998

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal

>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

Probab=100.00  E-value=1.4e-37  Score=333.35  Aligned_cols=242  Identities=23%  Similarity=0.381  Sum_probs=195.8

Q ss_pred             CCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccC---CchhHHHHHHHHHHhccCCCCC-cceeeeeeeeccCceEEE
Q 005257          365 GFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHE---NDGGTRAFLAEISSLGRLKHKS-LVGLRGWCKREKGSLMLV  440 (705)
Q Consensus       365 ~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~---~~~~~~~~~~Ei~~l~~l~Hpn-iv~l~g~~~~~~~~~~lV  440 (705)
                      +|+..+.||+|+||.||+|....+++.||||++...   .....+.+..|.+++..++|++ |+++++++.. .+.+++|
T Consensus         1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~-~~~~~lv   79 (324)
T cd05587           1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQT-MDRLYFV   79 (324)
T ss_pred             CceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEc-CCEEEEE
Confidence            477889999999999999999988999999998753   2344567888999999997654 6777776654 6789999


Q ss_pred             EeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecCC
Q 005257          441 YDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGH  520 (705)
Q Consensus       441 ~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~~  520 (705)
                      |||+++|+|.+++....   .+++..+..++.|++.||.|||+   ++|+||||||+|||++.++.+||+|||+++....
T Consensus        80 ~E~~~~g~L~~~~~~~~---~~~~~~~~~~~~qi~~al~~lH~---~~ivH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~  153 (324)
T cd05587          80 MEYVNGGDLMYHIQQVG---KFKEPHAVFYAAEIAIGLFFLHS---KGIIYRDLKLDNVMLDAEGHIKIADFGMCKENIF  153 (324)
T ss_pred             EcCCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHH---CCeEecCCCHHHeEEcCCCCEEEeecCcceecCC
Confidence            99999999999986543   58999999999999999999998   9999999999999999999999999999875322


Q ss_pred             CCcceeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhHHHHHhhhcC
Q 005257          521 GQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRAK  600 (705)
Q Consensus       521 ~~~~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~l~~~  600 (705)
                      .. .......||+.|+|||++.+..++.++|||||||++|||++|+.||......   .....+....            
T Consensus       154 ~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~---~~~~~i~~~~------------  217 (324)
T cd05587         154 GG-KTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDED---ELFQSIMEHN------------  217 (324)
T ss_pred             CC-CceeeecCCccccChhhhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHH---HHHHHHHcCC------------
Confidence            22 1233457999999999999989999999999999999999999999765421   1111111111            


Q ss_pred             CCCCHHHHHHHHHHHHHcCCCCCCCCCCH
Q 005257          601 GGFDEDEVERVLHLGLLCAYPDPRARPTM  629 (705)
Q Consensus       601 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~  629 (705)
                      ..++......+.+++..||+.||.+||+.
T Consensus       218 ~~~~~~~~~~~~~li~~~l~~~P~~R~~~  246 (324)
T cd05587         218 VSYPKSLSKEAVSICKGLLTKHPAKRLGC  246 (324)
T ss_pred             CCCCCCCCHHHHHHHHHHhhcCHHHcCCC
Confidence            12222334567889999999999999986

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory

>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase

Probab=100.00  E-value=6e-38  Score=342.33  Aligned_cols=255  Identities=21%  Similarity=0.246  Sum_probs=203.4

Q ss_pred             HhCCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccC---CchhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceE
Q 005257          362 ATKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHE---NDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLM  438 (705)
Q Consensus       362 at~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~---~~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~  438 (705)
                      ..++|...+.||+|+||.||++....+++.||+|++...   .....+.+.+|+.+++.++||||+++++++.. ...++
T Consensus        41 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~~-~~~~~  119 (370)
T cd05596          41 KAEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAFQD-DKYLY  119 (370)
T ss_pred             CHHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEEec-CCEEE
Confidence            456788999999999999999999999999999998643   22334557889999999999999999997765 67899


Q ss_pred             EEEeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceec
Q 005257          439 LVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMH  518 (705)
Q Consensus       439 lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~  518 (705)
                      +||||+++|+|.+++...    .+++..+..++.|++.||.|||+   ++|+||||||+|||++.++.+||+|||+++..
T Consensus       120 lv~Ey~~gg~L~~~l~~~----~l~~~~~~~~~~qi~~aL~~LH~---~~ivHrDLkp~NILl~~~~~~kL~DfG~~~~~  192 (370)
T cd05596         120 MVMEYMPGGDLVNLMSNY----DIPEKWARFYTAEVVLALDAIHS---MGFIHRDVKPDNMLLDKSGHLKLADFGTCMKM  192 (370)
T ss_pred             EEEcCCCCCcHHHHHHhc----CCCHHHHHHHHHHHHHHHHHHHH---CCeeccCCCHHHEEEcCCCCEEEEeccceeec
Confidence            999999999999998642    47888899999999999999998   99999999999999999999999999999876


Q ss_pred             CCCCcceeeeeeccccCCCccccccC----CCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhHHHH
Q 005257          519 GHGQVASTTRVVGTVGYLAPEVFSSG----RASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALD  594 (705)
Q Consensus       519 ~~~~~~~~~~~~gt~~y~APE~~~~~----~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~~id  594 (705)
                      ............||+.|+|||++.+.    .++.++|||||||++|||++|+.||......  . ....+..+..     
T Consensus       193 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~--~-~~~~i~~~~~-----  264 (370)
T cd05596         193 DANGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLV--G-TYSKIMDHKN-----  264 (370)
T ss_pred             cCCCcccCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCCCCHH--H-HHHHHHcCCC-----
Confidence            54333223345799999999998653    4789999999999999999999999865421  1 1111111100     


Q ss_pred             HhhhcCCCCCHHHHHHHHHHHHHcCCCCCCC--CCCHHHHHHH
Q 005257          595 ARLRAKGGFDEDEVERVLHLGLLCAYPDPRA--RPTMRQVVKV  635 (705)
Q Consensus       595 ~~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~--RPs~~evl~~  635 (705)
                       .+.  ..........+.+++..|++.+|.+  ||++.+++++
T Consensus       265 -~~~--~~~~~~~s~~~~~li~~~L~~~p~r~~R~s~~ell~h  304 (370)
T cd05596         265 -SLT--FPDDIEISKQAKDLICAFLTDREVRLGRNGVDEIKSH  304 (370)
T ss_pred             -cCC--CCCcCCCCHHHHHHHHHHccChhhccCCCCHHHHhcC
Confidence             000  0001123456788999999999987  9999999875

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in

>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=8.1e-38  Score=340.49  Aligned_cols=253  Identities=23%  Similarity=0.302  Sum_probs=200.1

Q ss_pred             CCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccC---CchhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEEE
Q 005257          364 KGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHE---NDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLV  440 (705)
Q Consensus       364 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~---~~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~lV  440 (705)
                      ++|+..+.||+|+||+||+|....+++.||||++...   .......+.+|+.++..++||||+++++++.. ++.+++|
T Consensus         1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~-~~~~~lv   79 (364)
T cd05599           1 DDFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSFQD-ENYLYLI   79 (364)
T ss_pred             CCceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEc-CCeEEEE
Confidence            4688899999999999999999999999999999653   22344567889999999999999999998876 6789999


Q ss_pred             EeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecCC
Q 005257          441 YDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGH  520 (705)
Q Consensus       441 ~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~~  520 (705)
                      |||+++|+|.+++....   .+++.++..++.|++.||.|||+   .+|+||||||+|||++.++.+||+|||++.....
T Consensus        80 ~E~~~~g~L~~~l~~~~---~l~~~~~~~~~~qi~~aL~~lH~---~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~  153 (364)
T cd05599          80 MEYLPGGDMMTLLMKKD---TFTEEETRFYIAETILAIDSIHK---LGYIHRDIKPDNLLLDAKGHIKLSDFGLCTGLKK  153 (364)
T ss_pred             ECCCCCcHHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHH---CCeEeccCCHHHeEECCCCCEEEeecccceeccc
Confidence            99999999999997543   68999999999999999999998   9999999999999999999999999999875432


Q ss_pred             CCcc-------------------------------------eeeeeeccccCCCccccccCCCCccccEEEEehhHHHHh
Q 005257          521 GQVA-------------------------------------STTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVL  563 (705)
Q Consensus       521 ~~~~-------------------------------------~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~Ell  563 (705)
                      ....                                     .....+||+.|+|||++....++.++|||||||++|||+
T Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~  233 (364)
T cd05599         154 SHRTEFYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDWWSLGVIMYEML  233 (364)
T ss_pred             cccccccccccccccccccccccccccccccccchhhcccccccccccCccccCHHHHcCCCCCCeeeeecchhHHHHhh
Confidence            1100                                     011246999999999999889999999999999999999


Q ss_pred             hCCCCCCCCCccHHHHHHHHHHhCchhHHHHHhhhcCCCCCHHHHHHHHHHHHHcCCCCCCCCCC---HHHHHHH
Q 005257          564 SGRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRAKGGFDEDEVERVLHLGLLCAYPDPRARPT---MRQVVKV  635 (705)
Q Consensus       564 tG~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs---~~evl~~  635 (705)
                      +|+.||......  +.. ..+....      ..+.  ........+.+.+++..|+. +|.+|++   +.+++++
T Consensus       234 ~G~~Pf~~~~~~--~~~-~~i~~~~------~~~~--~~~~~~~s~~~~~li~~ll~-~p~~R~~~~~~~~ll~h  296 (364)
T cd05599         234 VGYPPFCSDNPQ--ETY-RKIINWK------ETLQ--FPDEVPLSPEAKDLIKRLCC-EAERRLGNNGVNEIKSH  296 (364)
T ss_pred             cCCCCCCCCCHH--HHH-HHHHcCC------CccC--CCCCCCCCHHHHHHHHHHcc-CHhhcCCCCCHHHHhcC
Confidence            999999765431  111 1111110      0000  00011123456777788886 9999998   8888764

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica

>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

Probab=100.00  E-value=7.3e-38  Score=334.51  Aligned_cols=239  Identities=25%  Similarity=0.339  Sum_probs=194.1

Q ss_pred             eEEeecCceEEEEEEE---cCCCeEEEEEEeccCC--chhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEEEEeeC
Q 005257          370 NVIGVGGNGKVYKGVL---EGGGAEIAVKRISHEN--DGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYM  444 (705)
Q Consensus       370 ~~LG~G~fg~Vy~~~~---~~~~~~vavK~i~~~~--~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~lV~E~~  444 (705)
                      +.||+|+||.||++..   ..+++.+|+|++....  ......+..|++++++++||||+++++++.. .+.+++||||+
T Consensus         2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~-~~~~~lv~e~~   80 (318)
T cd05582           2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFIVKLHYAFQT-EGKLYLILDFL   80 (318)
T ss_pred             ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCCCCCcccEEEEEEc-CCEEEEEEcCC
Confidence            5799999999999876   3568899999987542  2234567789999999999999999998876 67899999999


Q ss_pred             CCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecCCCCcc
Q 005257          445 ENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVA  524 (705)
Q Consensus       445 ~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~~~~~~  524 (705)
                      ++|+|.+++.+..   .+++.++..++.|++.||.|||+   .+|+||||||+|||++.++.+||+|||+++....... 
T Consensus        81 ~~~~L~~~l~~~~---~l~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~-  153 (318)
T cd05582          81 RGGDLFTRLSKEV---MFTEEDVKFYLAELALALDHLHS---LGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEK-  153 (318)
T ss_pred             CCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHH---CCEecCCCCHHHeEECCCCcEEEeeccCCcccCCCCC-
Confidence            9999999986532   68999999999999999999998   9999999999999999999999999999986543322 


Q ss_pred             eeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhHHHHHhhhcCCCCC
Q 005257          525 STTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRAKGGFD  604 (705)
Q Consensus       525 ~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~l~~~~~~~  604 (705)
                      ......||+.|+|||++.+..++.++|||||||++|||++|+.||......   .....+...            ....+
T Consensus       154 ~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~---~~~~~i~~~------------~~~~p  218 (318)
T cd05582         154 KAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQGKDRK---ETMTMILKA------------KLGMP  218 (318)
T ss_pred             ceecccCChhhcCHHHHcCCCCCCccceeccceEeeeeccCCCCCCCCCHH---HHHHHHHcC------------CCCCC
Confidence            233467899999999998888999999999999999999999999764321   111111111            11222


Q ss_pred             HHHHHHHHHHHHHcCCCCCCCCCCHHH
Q 005257          605 EDEVERVLHLGLLCAYPDPRARPTMRQ  631 (705)
Q Consensus       605 ~~~~~~l~~l~~~Cl~~dP~~RPs~~e  631 (705)
                      ......+.+++..||+.||++||++.+
T Consensus       219 ~~~~~~~~~li~~~l~~~P~~R~~a~~  245 (318)
T cd05582         219 QFLSPEAQSLLRALFKRNPANRLGAGP  245 (318)
T ss_pred             CCCCHHHHHHHHHHhhcCHhHcCCCCC
Confidence            233456788999999999999999665

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate

>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2

Probab=100.00  E-value=1.3e-37  Score=339.52  Aligned_cols=258  Identities=21%  Similarity=0.244  Sum_probs=201.6

Q ss_pred             HHHHhCCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccC---CchhHHHHHHHHHHhccCCCCCcceeeeeeeeccC
Q 005257          359 IEAATKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHE---NDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKG  435 (705)
Q Consensus       359 l~~at~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~---~~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~  435 (705)
                      +....++|+..+.||+|+||.||++.+..+++.+|+|.+...   .....+.+.+|+.+++.++||||+++++++.. +.
T Consensus        38 ~~~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~-~~  116 (370)
T cd05621          38 LQMKAEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQD-DK  116 (370)
T ss_pred             cCCCHHHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEc-CC
Confidence            334557899999999999999999999999999999998642   22334567899999999999999999998875 67


Q ss_pred             ceEEEEeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccc
Q 005257          436 SLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLA  515 (705)
Q Consensus       436 ~~~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla  515 (705)
                      .+++||||+++|+|.+++...    .+++..+..++.||+.||.|||+   ++|+||||||+|||+++++.+||+|||++
T Consensus       117 ~~~lv~Ey~~gg~L~~~l~~~----~~~~~~~~~~~~qil~aL~~LH~---~~IvHrDLKp~NILl~~~~~~kL~DFG~a  189 (370)
T cd05621         117 YLYMVMEYMPGGDLVNLMSNY----DVPEKWAKFYTAEVVLALDAIHS---MGLIHRDVKPDNMLLDKHGHLKLADFGTC  189 (370)
T ss_pred             EEEEEEcCCCCCcHHHHHHhc----CCCHHHHHHHHHHHHHHHHHHHH---CCeEecCCCHHHEEECCCCCEEEEecccc
Confidence            899999999999999998542    47889999999999999999998   99999999999999999999999999999


Q ss_pred             eecCCCCcceeeeeeccccCCCccccccC----CCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhH
Q 005257          516 RMHGHGQVASTTRVVGTVGYLAPEVFSSG----RASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLD  591 (705)
Q Consensus       516 ~~~~~~~~~~~~~~~gt~~y~APE~~~~~----~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~  591 (705)
                      ...............||+.|||||++.+.    .++.++||||+||++|||++|+.||.....  .... ..+.....  
T Consensus       190 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~~~--~~~~-~~i~~~~~--  264 (370)
T cd05621         190 MKMDETGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSL--VGTY-SKIMDHKN--  264 (370)
T ss_pred             eecccCCceecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCCCCH--HHHH-HHHHhCCc--
Confidence            87654333233346799999999998653    378899999999999999999999976542  1111 11111100  


Q ss_pred             HHHHhhhcCCCCCHHHHHHHHHHHHHcCCCCCCC--CCCHHHHHHH
Q 005257          592 ALDARLRAKGGFDEDEVERVLHLGLLCAYPDPRA--RPTMRQVVKV  635 (705)
Q Consensus       592 ~id~~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~--RPs~~evl~~  635 (705)
                          .+.  ..........+.+++..|+..++.+  ||++.|++++
T Consensus       265 ----~~~--~p~~~~~s~~~~~li~~~L~~~~~r~~R~~~~e~l~h  304 (370)
T cd05621         265 ----SLN--FPEDVEISKHAKNLICAFLTDREVRLGRNGVEEIKQH  304 (370)
T ss_pred             ----ccC--CCCcccCCHHHHHHHHHHccCchhccCCCCHHHHhcC
Confidence                000  0011122455677788888755543  8899998885

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found

>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

Probab=100.00  E-value=3.9e-37  Score=317.04  Aligned_cols=251  Identities=28%  Similarity=0.420  Sum_probs=207.6

Q ss_pred             CCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccC--CchhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEEEEe
Q 005257          365 GFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHE--NDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYD  442 (705)
Q Consensus       365 ~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~--~~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~lV~E  442 (705)
                      +|...+.||+|++|.||+|....+++.|++|.+...  .....+++.+|++++++++|||++++++.+.. ++..++|||
T Consensus         1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~lv~e   79 (256)
T cd08529           1 DFEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYIIRYYESFLD-KGKLNIVME   79 (256)
T ss_pred             CceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhcCCCCeehheeeecc-CCEEEEEEE
Confidence            467788999999999999999989999999998643  34456788999999999999999999998876 678999999


Q ss_pred             eCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecCCCC
Q 005257          443 YMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQ  522 (705)
Q Consensus       443 ~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~~~~  522 (705)
                      |+++++|.+++..... ..+++.+++.++.|++.||.|||+   .+++|+||||+||+++.++.+||+|||+++......
T Consensus        80 ~~~~~~L~~~l~~~~~-~~~~~~~~~~i~~~l~~al~~lH~---~~i~h~dl~~~nili~~~~~~~l~df~~~~~~~~~~  155 (256)
T cd08529          80 YAENGDLHKLLKMQRG-RPLPEDQVWRFFIQILLGLAHLHS---KKILHRDIKSLNLFLDAYDNVKIGDLGVAKLLSDNT  155 (256)
T ss_pred             eCCCCcHHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCcceEEEeCCCCEEEcccccceeccCcc
Confidence            9999999999976532 368999999999999999999998   999999999999999999999999999998765433


Q ss_pred             cceeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhHHHHHhhhcCCC
Q 005257          523 VASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRAKGG  602 (705)
Q Consensus       523 ~~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~l~~~~~  602 (705)
                      .. .....|++.|+|||++.+..++.++|||||||++|||++|+.||.....   .........+..           ..
T Consensus       156 ~~-~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~---~~~~~~~~~~~~-----------~~  220 (256)
T cd08529         156 NF-ANTIVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCTGKHPFDANNQ---GALILKIIRGVF-----------PP  220 (256)
T ss_pred             ch-hhccccCccccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCH---HHHHHHHHcCCC-----------CC
Confidence            22 2234688999999999988899999999999999999999999976542   111111111111           11


Q ss_pred             CCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 005257          603 FDEDEVERVLHLGLLCAYPDPRARPTMRQVVKV  635 (705)
Q Consensus       603 ~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  635 (705)
                      ........+.+++.+||+.+|++||++.++++.
T Consensus       221 ~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~  253 (256)
T cd08529         221 VSQMYSQQLAQLIDQCLTKDYRQRPDTFQLLRN  253 (256)
T ss_pred             CccccCHHHHHHHHHHccCCcccCcCHHHHhhC
Confidence            222345678999999999999999999999864

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc

>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

Probab=100.00  E-value=1.3e-37  Score=333.11  Aligned_cols=238  Identities=26%  Similarity=0.335  Sum_probs=190.8

Q ss_pred             eEEeecCceEEEEEEEcCCCeEEEEEEeccCC---chhHHHHHHHHH-HhccCCCCCcceeeeeeeeccCceEEEEeeCC
Q 005257          370 NVIGVGGNGKVYKGVLEGGGAEIAVKRISHEN---DGGTRAFLAEIS-SLGRLKHKSLVGLRGWCKREKGSLMLVYDYME  445 (705)
Q Consensus       370 ~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~---~~~~~~~~~Ei~-~l~~l~Hpniv~l~g~~~~~~~~~~lV~E~~~  445 (705)
                      ++||+|+||.||+|.+..+++.||+|++....   ......+.+|.. +++.++||||+++++++.. .+..++||||++
T Consensus         1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~-~~~~~lv~e~~~   79 (321)
T cd05603           1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQT-AEKLYFVLDYVN   79 (321)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEEEc-CCEEEEEEcCCC
Confidence            46999999999999999899999999986532   223345556654 5788999999999998765 678999999999


Q ss_pred             CCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecCCCCcce
Q 005257          446 NGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVAS  525 (705)
Q Consensus       446 ~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~~~~~~~  525 (705)
                      +|+|..++....   .+++.++..++.||+.||.|||+   .+|+||||||+|||++.++.+||+|||+++...... ..
T Consensus        80 ~~~L~~~l~~~~---~~~~~~~~~~~~qi~~~L~~lH~---~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~-~~  152 (321)
T cd05603          80 GGELFFHLQRER---CFLEPRARFYAAEVASAIGYLHS---LNIIYRDLKPENILLDSQGHVVLTDFGLCKEGVEPE-ET  152 (321)
T ss_pred             CCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHH---CCeEeccCCHHHeEECCCCCEEEccCCCCccCCCCC-Cc
Confidence            999998886532   58899999999999999999998   999999999999999999999999999987532222 12


Q ss_pred             eeeeeccccCCCccccccCCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhHHHHHhhhcCCCCCH
Q 005257          526 TTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRAKGGFDE  605 (705)
Q Consensus       526 ~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~l~~~~~~~~  605 (705)
                      .....||+.|+|||++.+..++.++|||||||++|||++|+.||......   ...+.+..+            ....+.
T Consensus       153 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~---~~~~~i~~~------------~~~~~~  217 (321)
T cd05603         153 TSTFCGTPEYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLPPFYSRDVS---QMYDNILHK------------PLQLPG  217 (321)
T ss_pred             cccccCCcccCCHHHhcCCCCCCcCcccccchhhhhhhcCCCCCCCCCHH---HHHHHHhcC------------CCCCCC
Confidence            23457899999999999888999999999999999999999999765321   111111111            112233


Q ss_pred             HHHHHHHHHHHHcCCCCCCCCCCHH
Q 005257          606 DEVERVLHLGLLCAYPDPRARPTMR  630 (705)
Q Consensus       606 ~~~~~l~~l~~~Cl~~dP~~RPs~~  630 (705)
                      .....+.+++.+|++.||.+||+..
T Consensus       218 ~~~~~~~~li~~~l~~~p~~R~~~~  242 (321)
T cd05603         218 GKTVAACDLLVGLLHKDQRRRLGAK  242 (321)
T ss_pred             CCCHHHHHHHHHHccCCHhhcCCCC
Confidence            3445688999999999999999864

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.

>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha

Probab=100.00  E-value=9.1e-38  Score=343.44  Aligned_cols=262  Identities=26%  Similarity=0.422  Sum_probs=207.7

Q ss_pred             hCCCCcceEEeecCceEEEEEEEcCC-----CeEEEEEEeccCCc-hhHHHHHHHHHHhccCC-CCCcceeeeeeeeccC
Q 005257          363 TKGFSEENVIGVGGNGKVYKGVLEGG-----GAEIAVKRISHEND-GGTRAFLAEISSLGRLK-HKSLVGLRGWCKREKG  435 (705)
Q Consensus       363 t~~f~~~~~LG~G~fg~Vy~~~~~~~-----~~~vavK~i~~~~~-~~~~~~~~Ei~~l~~l~-Hpniv~l~g~~~~~~~  435 (705)
                      .++|...++||+|+||.||+|.+...     +..||||++..... ...+.+.+|++++++++ ||||++++++|.. .+
T Consensus        36 ~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~~~-~~  114 (400)
T cd05105          36 RDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLGPHLNIVNLLGACTK-SG  114 (400)
T ss_pred             ccceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhcCCCCCeeeEEEEEcc-CC
Confidence            56788899999999999999987432     35799999975433 34567999999999996 9999999999876 67


Q ss_pred             ceEEEEeeCCCCChhHHHHhcCC---------------------------------------------------------
Q 005257          436 SLMLVYDYMENGSLDKWIFQCDG---------------------------------------------------------  458 (705)
Q Consensus       436 ~~~lV~E~~~~gsL~~~L~~~~~---------------------------------------------------------  458 (705)
                      ..+|||||+++|+|.++|.+...                                                         
T Consensus       115 ~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  194 (400)
T cd05105         115 PIYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQYVPMLEI  194 (400)
T ss_pred             ceEEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhcccccccccccccccccchhhhh
Confidence            89999999999999999875321                                                         


Q ss_pred             ------------------------------------CCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEc
Q 005257          459 ------------------------------------SMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLD  502 (705)
Q Consensus       459 ------------------------------------~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld  502 (705)
                                                          ...+++.++++++.|++.||.|||+   .+|+||||||+|||++
T Consensus       195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~---~~ivH~dikp~Nill~  271 (400)
T cd05105         195 KEASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLAS---KNCVHRDLAARNVLLA  271 (400)
T ss_pred             hhhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHh---CCeeCCCCChHhEEEe
Confidence                                                1247888999999999999999998   9999999999999999


Q ss_pred             cCCCeeeeeeccceecCCCCcc-eeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhh-CCCCCCCCCccHHHHH
Q 005257          503 KEMNGRLGDFGLARMHGHGQVA-STTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLS-GRRPIEEGKPNLVEMV  580 (705)
Q Consensus       503 ~~~~~kL~DFGla~~~~~~~~~-~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~Ellt-G~~Pf~~~~~~~~~~v  580 (705)
                      .++.+||+|||+++........ ......++..|+|||.+.+..++.++|||||||++|||++ |..||......  ...
T Consensus       272 ~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt~g~~P~~~~~~~--~~~  349 (400)
T cd05105         272 QGKIVKICDFGLARDIMHDSNYVSKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGILLWEIFSLGGTPYPGMIVD--STF  349 (400)
T ss_pred             CCCEEEEEeCCcceeccccccccccCCcCCCcceEChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCcccchh--HHH
Confidence            9999999999999865432221 1222356788999999988889999999999999999997 99998753221  111


Q ss_pred             HHHHHhCchhHHHHHhhhcCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHhccc
Q 005257          581 WELMVQGKLLDALDARLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLEGKIE  641 (705)
Q Consensus       581 ~~~~~~~~~~~~id~~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~  641 (705)
                      ...+..+.         .  ...+......+.+++.+||+.||++||++.++.+.|+...+
T Consensus       350 ~~~~~~~~---------~--~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~l~~l~~  399 (400)
T cd05105         350 YNKIKSGY---------R--MAKPDHATQEVYDIMVKCWNSEPEKRPSFLHLSDIVESLLP  399 (400)
T ss_pred             HHHHhcCC---------C--CCCCccCCHHHHHHHHHHCccCHhHCcCHHHHHHHHHHHcC
Confidence            12222111         1  11223345678899999999999999999999999986654

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-

>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

Probab=100.00  E-value=1.8e-37  Score=332.38  Aligned_cols=242  Identities=24%  Similarity=0.373  Sum_probs=196.4

Q ss_pred             CCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCC---chhHHHHHHHHHHhccC-CCCCcceeeeeeeeccCceEEE
Q 005257          365 GFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHEN---DGGTRAFLAEISSLGRL-KHKSLVGLRGWCKREKGSLMLV  440 (705)
Q Consensus       365 ~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~---~~~~~~~~~Ei~~l~~l-~Hpniv~l~g~~~~~~~~~~lV  440 (705)
                      +|...+.||+|+||.||+|....+++.||||++....   ....+.+..|..++..+ +|++|+++++++.. .+.+++|
T Consensus         1 df~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~-~~~~~lv   79 (323)
T cd05616           1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQT-MDRLYFV   79 (323)
T ss_pred             CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEec-CCEEEEE
Confidence            4778899999999999999999889999999987542   23345567788888877 57888889887765 6789999


Q ss_pred             EeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecCC
Q 005257          441 YDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGH  520 (705)
Q Consensus       441 ~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~~  520 (705)
                      |||+++|+|.+++....   .+++.++..++.|++.||.|||+   ++|+||||||+|||++.++.+||+|||+++....
T Consensus        80 ~E~~~~g~L~~~~~~~~---~~~~~~~~~~~~qi~~aL~~LH~---~~ivHrDlkp~Nill~~~~~~kL~DfG~~~~~~~  153 (323)
T cd05616          80 MEYVNGGDLMYQIQQVG---RFKEPHAVFYAAEIAIGLFFLHS---KGIIYRDLKLDNVMLDSEGHIKIADFGMCKENMW  153 (323)
T ss_pred             EcCCCCCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHH---CCEEecCCCHHHeEECCCCcEEEccCCCceecCC
Confidence            99999999999886543   58999999999999999999998   9999999999999999999999999999975432


Q ss_pred             CCcceeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhHHHHHhhhcC
Q 005257          521 GQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRAK  600 (705)
Q Consensus       521 ~~~~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~l~~~  600 (705)
                      ... ......||+.|+|||++.+..++.++|||||||++|||++|+.||......   .....+..+.            
T Consensus       154 ~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~Pf~~~~~~---~~~~~i~~~~------------  217 (323)
T cd05616         154 DGV-TTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDED---ELFQSIMEHN------------  217 (323)
T ss_pred             CCC-ccccCCCChhhcCHHHhcCCCCCCccchhchhHHHHHHHhCCCCCCCCCHH---HHHHHHHhCC------------
Confidence            221 223457899999999999999999999999999999999999999765421   1111111111            


Q ss_pred             CCCCHHHHHHHHHHHHHcCCCCCCCCCCH
Q 005257          601 GGFDEDEVERVLHLGLLCAYPDPRARPTM  629 (705)
Q Consensus       601 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~  629 (705)
                      ..++......+.+++..|++.||++|++.
T Consensus       218 ~~~p~~~s~~~~~li~~~l~~~p~~R~~~  246 (323)
T cd05616         218 VAYPKSMSKEAVAICKGLMTKHPGKRLGC  246 (323)
T ss_pred             CCCCCcCCHHHHHHHHHHcccCHHhcCCC
Confidence            12233344667899999999999999985

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and

>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

Probab=100.00  E-value=1.5e-37  Score=332.97  Aligned_cols=238  Identities=26%  Similarity=0.322  Sum_probs=191.3

Q ss_pred             eEEeecCceEEEEEEEcCCCeEEEEEEeccCC---chhHHHHHHHHH-HhccCCCCCcceeeeeeeeccCceEEEEeeCC
Q 005257          370 NVIGVGGNGKVYKGVLEGGGAEIAVKRISHEN---DGGTRAFLAEIS-SLGRLKHKSLVGLRGWCKREKGSLMLVYDYME  445 (705)
Q Consensus       370 ~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~---~~~~~~~~~Ei~-~l~~l~Hpniv~l~g~~~~~~~~~~lV~E~~~  445 (705)
                      +.||+|+||+||+|.+..+++.||||++....   ....+++.+|.. +++.++||||+++++++.. ++..++||||++
T Consensus         1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~-~~~~~lv~e~~~   79 (323)
T cd05575           1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQT-ADKLYFVLDYVN   79 (323)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEe-CCEEEEEEcCCC
Confidence            46999999999999999999999999986532   223345556655 5678999999999998876 678999999999


Q ss_pred             CCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecCCCCcce
Q 005257          446 NGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVAS  525 (705)
Q Consensus       446 ~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~~~~~~~  525 (705)
                      +|+|..++....   .+++..+..++.||+.||.|||+   .+|+||||||+|||++.++.+||+|||+++...... ..
T Consensus        80 ~g~L~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lH~---~givH~dikp~NIll~~~~~~kl~Dfg~~~~~~~~~-~~  152 (323)
T cd05575          80 GGELFFHLQRER---SFPEPRARFYAAEIASALGYLHS---LNIIYRDLKPENILLDSQGHVVLTDFGLCKEGIEHS-KT  152 (323)
T ss_pred             CCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHH---CCeEeCCCCHHHeEECCCCcEEEeccCCCcccccCC-Cc
Confidence            999999986533   68999999999999999999998   999999999999999999999999999987543222 22


Q ss_pred             eeeeeccccCCCccccccCCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhHHHHHhhhcCCCCCH
Q 005257          526 TTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRAKGGFDE  605 (705)
Q Consensus       526 ~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~l~~~~~~~~  605 (705)
                      .....||+.|+|||++.+..++.++|||||||++|||++|+.||.....   ....+.+..+.            .....
T Consensus       153 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~---~~~~~~i~~~~------------~~~~~  217 (323)
T cd05575         153 TSTFCGTPEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRDT---AEMYDNILNKP------------LRLKP  217 (323)
T ss_pred             cccccCChhhcChhhhcCCCCCccccccccchhhhhhhcCCCCCCCCCH---HHHHHHHHcCC------------CCCCC
Confidence            3345799999999999998999999999999999999999999976432   11111111111            11222


Q ss_pred             HHHHHHHHHHHHcCCCCCCCCCCHH
Q 005257          606 DEVERVLHLGLLCAYPDPRARPTMR  630 (705)
Q Consensus       606 ~~~~~l~~l~~~Cl~~dP~~RPs~~  630 (705)
                      .....+.+++..|++.||.+||+++
T Consensus       218 ~~~~~~~~li~~~l~~~p~~R~~~~  242 (323)
T cd05575         218 NISVSARHLLEGLLQKDRTKRLGAK  242 (323)
T ss_pred             CCCHHHHHHHHHHhhcCHHhCCCCC
Confidence            2345678899999999999999985

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr

>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

Probab=100.00  E-value=1.7e-37  Score=327.01  Aligned_cols=263  Identities=27%  Similarity=0.440  Sum_probs=209.2

Q ss_pred             HHHhCCCCcceEEeecCceEEEEEEEcCC-----CeEEEEEEeccCC-chhHHHHHHHHHHhccC-CCCCcceeeeeeee
Q 005257          360 EAATKGFSEENVIGVGGNGKVYKGVLEGG-----GAEIAVKRISHEN-DGGTRAFLAEISSLGRL-KHKSLVGLRGWCKR  432 (705)
Q Consensus       360 ~~at~~f~~~~~LG~G~fg~Vy~~~~~~~-----~~~vavK~i~~~~-~~~~~~~~~Ei~~l~~l-~Hpniv~l~g~~~~  432 (705)
                      +...++|+..+.||+|+||.||++.....     ...+|+|.+.... .....++.+|+.++.++ +|+||+++++++..
T Consensus         8 ~~~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~   87 (293)
T cd05053           8 ELPRDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGVCTQ   87 (293)
T ss_pred             ccCHhHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEcC
Confidence            34456788899999999999999998643     3789999987542 33456789999999999 89999999998876


Q ss_pred             ccCceEEEEeeCCCCChhHHHHhcC-------------CCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCe
Q 005257          433 EKGSLMLVYDYMENGSLDKWIFQCD-------------GSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNV  499 (705)
Q Consensus       433 ~~~~~~lV~E~~~~gsL~~~L~~~~-------------~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NI  499 (705)
                       ++..+++|||+++|+|..++....             ....+++..+++++.|++.||.|||+   .+|+||||||+||
T Consensus        88 -~~~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~---~~ivH~dlkp~Ni  163 (293)
T cd05053          88 -EGPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLAS---KKCIHRDLAARNV  163 (293)
T ss_pred             -CCCeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHH---CCccccccceeeE
Confidence             668999999999999999996531             22368999999999999999999998   9999999999999


Q ss_pred             EEccCCCeeeeeeccceecCCCCcce-eeeeeccccCCCccccccCCCCccccEEEEehhHHHHhh-CCCCCCCCCccHH
Q 005257          500 LLDKEMNGRLGDFGLARMHGHGQVAS-TTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLS-GRRPIEEGKPNLV  577 (705)
Q Consensus       500 Lld~~~~~kL~DFGla~~~~~~~~~~-~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~Ellt-G~~Pf~~~~~~~~  577 (705)
                      ++++++.+||+|||+++......... .....++..|+|||.+.+..++.++|||||||++|||++ |..||.....   
T Consensus       164 l~~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~---  240 (293)
T cd05053         164 LVTEDHVMKIADFGLARDIHHIDYYRKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPV---  240 (293)
T ss_pred             EEcCCCeEEeCccccccccccccceeccCCCCCCccccCHHHhccCCcCcccceeehhhHHHHHhcCCCCCCCCCCH---
Confidence            99999999999999998765432211 122234678999999988889999999999999999998 9999875432   


Q ss_pred             HHHHHHHHhCchhHHHHHhhhcCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHhcc
Q 005257          578 EMVWELMVQGKLLDALDARLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLEGKI  640 (705)
Q Consensus       578 ~~v~~~~~~~~~~~~id~~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~  640 (705)
                      ..+......+.         .  ...+......+.+++..||+.||++|||+.++++.|+..+
T Consensus       241 ~~~~~~~~~~~---------~--~~~~~~~~~~~~~li~~~l~~~p~~Rps~~eil~~l~~~~  292 (293)
T cd05053         241 EELFKLLKEGY---------R--MEKPQNCTQELYHLMRDCWHEVPSQRPTFKQLVEDLDRML  292 (293)
T ss_pred             HHHHHHHHcCC---------c--CCCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHHHHhh
Confidence            11122222111         1  1122334567889999999999999999999999998653

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,

>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

Probab=100.00  E-value=1.8e-37  Score=324.44  Aligned_cols=256  Identities=23%  Similarity=0.428  Sum_probs=206.8

Q ss_pred             CCCCcceEEeecCceEEEEEEEcC-----CCeEEEEEEeccCCch-hHHHHHHHHHHhccCCCCCcceeeeeeeeccCce
Q 005257          364 KGFSEENVIGVGGNGKVYKGVLEG-----GGAEIAVKRISHENDG-GTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSL  437 (705)
Q Consensus       364 ~~f~~~~~LG~G~fg~Vy~~~~~~-----~~~~vavK~i~~~~~~-~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~  437 (705)
                      ++|...+.||+|+||.||+|....     ++..||||.++..... ..+.+.+|++++++++||||+++++++.. ....
T Consensus         5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~   83 (280)
T cd05049           5 DTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQHENIVKFYGVCTE-GDPP   83 (280)
T ss_pred             HHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccCCHHHHHHHHHHHHHHHhcCCCCchheeeEEec-CCCe
Confidence            457778899999999999998753     3578999998765444 46789999999999999999999999876 5789


Q ss_pred             EEEEeeCCCCChhHHHHhcCC-----------CCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCC
Q 005257          438 MLVYDYMENGSLDKWIFQCDG-----------SMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMN  506 (705)
Q Consensus       438 ~lV~E~~~~gsL~~~L~~~~~-----------~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~  506 (705)
                      ++||||+++++|.+++.....           ...+++.++..++.|++.||.|||+   .+++||||||+||+++.++.
T Consensus        84 ~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~---~~i~h~dlkp~nili~~~~~  160 (280)
T cd05049          84 IMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLAS---QHFVHRDLATRNCLVGYDLV  160 (280)
T ss_pred             EEEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhh---CCeeccccccceEEEcCCCe
Confidence            999999999999999975421           2358899999999999999999998   89999999999999999999


Q ss_pred             eeeeeeccceecCCCCc-ceeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhh-CCCCCCCCCccHHHHHHHHH
Q 005257          507 GRLGDFGLARMHGHGQV-ASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLS-GRRPIEEGKPNLVEMVWELM  584 (705)
Q Consensus       507 ~kL~DFGla~~~~~~~~-~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~Ellt-G~~Pf~~~~~~~~~~v~~~~  584 (705)
                      +||+|||+++....... .......+++.|+|||++.+..++.++|||||||++|||++ |+.||......   .....+
T Consensus       161 ~kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e~~~~g~~p~~~~~~~---~~~~~~  237 (280)
T cd05049         161 VKIGDFGMSRDVYTTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVVLWEIFTYGKQPWYGLSNE---EVIECI  237 (280)
T ss_pred             EEECCcccceecccCcceecCCCCcccceecChhhhccCCcchhhhHHHHHHHHHHHHhcCCCCCCCCCHH---HHHHHH
Confidence            99999999976533221 11222345788999999999999999999999999999998 99998754321   111222


Q ss_pred             HhCchhHHHHHhhhcCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHH
Q 005257          585 VQGKLLDALDARLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLE  637 (705)
Q Consensus       585 ~~~~~~~~id~~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  637 (705)
                      ..+..           ...+......+.+++..||+.||++||++.|+++.|+
T Consensus       238 ~~~~~-----------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~l~  279 (280)
T cd05049         238 TQGRL-----------LQRPRTCPSEVYDIMLGCWKRDPQQRINIKDIHERLQ  279 (280)
T ss_pred             HcCCc-----------CCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhh
Confidence            22211           1112234467889999999999999999999999886

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt

>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1

Probab=100.00  E-value=2e-37  Score=337.42  Aligned_cols=203  Identities=26%  Similarity=0.348  Sum_probs=176.5

Q ss_pred             CCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCC---chhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEEE
Q 005257          364 KGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHEN---DGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLV  440 (705)
Q Consensus       364 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~---~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~lV  440 (705)
                      ++|+..+.||+|+||+||++....+++.||||+++...   ......+.+|+.++.+++||||+++++.+.+ ...+++|
T Consensus         1 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~~-~~~~~lv   79 (363)
T cd05628           1 EDFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQD-KLNLYLI   79 (363)
T ss_pred             CCceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEEec-CCeEEEE
Confidence            46888999999999999999999899999999986532   2334567889999999999999999998876 6789999


Q ss_pred             EeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecCC
Q 005257          441 YDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGH  520 (705)
Q Consensus       441 ~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~~  520 (705)
                      |||+++|+|.+++.+..   .+++.++..++.|++.||.|||+   ++|+||||||+|||++.++.+||+|||+++....
T Consensus        80 ~E~~~gg~L~~~l~~~~---~l~~~~~~~~~~qi~~aL~~lH~---~givHrDlKp~NILi~~~~~vkL~DFGla~~~~~  153 (363)
T cd05628          80 MEFLPGGDMMTLLMKKD---TLTEEETQFYIAETVLAIDSIHQ---LGFIHRDIKPDNLLLDSKGHVKLSDFGLCTGLKK  153 (363)
T ss_pred             EcCCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHh---CCeEecCCCHHHeEECCCCCEEEeeccCcccccc
Confidence            99999999999997543   68999999999999999999998   9999999999999999999999999999875432


Q ss_pred             CCc----------------------------------ceeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhhCC
Q 005257          521 GQV----------------------------------ASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGR  566 (705)
Q Consensus       521 ~~~----------------------------------~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~  566 (705)
                      ...                                  ......+||+.|+|||++.+..++.++|||||||++|||++|+
T Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DvwSlGvil~ell~G~  233 (363)
T cd05628         154 AHRTEFYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGY  233 (363)
T ss_pred             cccccccccccccccccccccccccccccchhhhccccccccccCCccccCHHHHcCCCCCCchhhhhhHHHHHHHHhCC
Confidence            110                                  0012357999999999999989999999999999999999999


Q ss_pred             CCCCCCC
Q 005257          567 RPIEEGK  573 (705)
Q Consensus       567 ~Pf~~~~  573 (705)
                      .||....
T Consensus       234 ~Pf~~~~  240 (363)
T cd05628         234 PPFCSET  240 (363)
T ss_pred             CCCCCCC
Confidence            9997654

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus

>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C

Probab=100.00  E-value=2.5e-37  Score=332.12  Aligned_cols=245  Identities=24%  Similarity=0.350  Sum_probs=196.4

Q ss_pred             eEEeecCceEEEEEEEcCCCeEEEEEEeccC---CchhHHHHHHHHHHhccC-CCCCcceeeeeeeeccCceEEEEeeCC
Q 005257          370 NVIGVGGNGKVYKGVLEGGGAEIAVKRISHE---NDGGTRAFLAEISSLGRL-KHKSLVGLRGWCKREKGSLMLVYDYME  445 (705)
Q Consensus       370 ~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~---~~~~~~~~~~Ei~~l~~l-~Hpniv~l~g~~~~~~~~~~lV~E~~~  445 (705)
                      +.||+|+||.||++.+..+++.||||+++..   .....+.+.+|..++..+ +||||+++++++.. .+.+++||||++
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~-~~~~~lv~e~~~   79 (329)
T cd05588           1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQT-ESRLFFVIEFVS   79 (329)
T ss_pred             CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEc-CCEEEEEEeCCC
Confidence            4699999999999999999999999999754   223455688899999998 79999999998876 678999999999


Q ss_pred             CCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecCCCCcce
Q 005257          446 NGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVAS  525 (705)
Q Consensus       446 ~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~~~~~~~  525 (705)
                      +|+|.+++.+..   .+++..+..++.|++.||.|||+   ++++||||||+|||++.++.+||+|||+++...... ..
T Consensus        80 ~g~L~~~~~~~~---~l~~~~~~~~~~qi~~~l~~lH~---~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~~-~~  152 (329)
T cd05588          80 GGDLMFHMQRQR---KLPEEHARFYSAEISLALNFLHE---RGIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGIRPG-DT  152 (329)
T ss_pred             CCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHH---CCeEecCCCHHHeEECCCCCEEECcCccccccccCC-Cc
Confidence            999998886532   69999999999999999999998   999999999999999999999999999987432211 12


Q ss_pred             eeeeeccccCCCccccccCCCCccccEEEEehhHHHHhhCCCCCCCCC------ccHHHHHHHHHHhCchhHHHHHhhhc
Q 005257          526 TTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGK------PNLVEMVWELMVQGKLLDALDARLRA  599 (705)
Q Consensus       526 ~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~------~~~~~~v~~~~~~~~~~~~id~~l~~  599 (705)
                      .....||+.|+|||++.+..++.++|||||||++|||++|+.||....      ....++..+.+..+.           
T Consensus       153 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~-----------  221 (329)
T cd05588         153 TSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQNTEDYLFQVILEKQ-----------  221 (329)
T ss_pred             cccccCCccccCHHHHcCCCCCCccceechHHHHHHHHHCCCCcccccccccccccchHHHHHHHHcCC-----------
Confidence            234579999999999999899999999999999999999999996321      111222222222211           


Q ss_pred             CCCCCHHHHHHHHHHHHHcCCCCCCCCCC------HHHHHH
Q 005257          600 KGGFDEDEVERVLHLGLLCAYPDPRARPT------MRQVVK  634 (705)
Q Consensus       600 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs------~~evl~  634 (705)
                       ...+......+.+++..|++.||.+||+      +.++++
T Consensus       222 -~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~  261 (329)
T cd05588         222 -IRIPRSLSVKASSVLKGFLNKDPKERLGCHPQTGFRDIKS  261 (329)
T ss_pred             -CCCCCCCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHhc
Confidence             1122223456788999999999999998      566654

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl

>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor

Probab=100.00  E-value=1.8e-37  Score=324.41  Aligned_cols=258  Identities=21%  Similarity=0.421  Sum_probs=204.8

Q ss_pred             HhCCCCcceEEeecCceEEEEEEEcC-----CCeEEEEEEeccCC-chhHHHHHHHHHHhccCCCCCcceeeeeeeeccC
Q 005257          362 ATKGFSEENVIGVGGNGKVYKGVLEG-----GGAEIAVKRISHEN-DGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKG  435 (705)
Q Consensus       362 at~~f~~~~~LG~G~fg~Vy~~~~~~-----~~~~vavK~i~~~~-~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~  435 (705)
                      ++++|+..+.||+|+||.||+|.+..     .+..||+|++.... .....++.+|+.+++.++||||+++++++.. +.
T Consensus         4 ~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~-~~   82 (277)
T cd05062           4 AREKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQ-GQ   82 (277)
T ss_pred             cHHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcC-CC
Confidence            46778999999999999999998752     35679999886443 2345678999999999999999999998875 66


Q ss_pred             ceEEEEeeCCCCChhHHHHhcCC-------CCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCee
Q 005257          436 SLMLVYDYMENGSLDKWIFQCDG-------SMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGR  508 (705)
Q Consensus       436 ~~~lV~E~~~~gsL~~~L~~~~~-------~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~k  508 (705)
                      ..++||||+++|+|.+++.+...       ...+++..++.++.|++.||.|||+   .+++||||||+||++++++.+|
T Consensus        83 ~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~---~~~vH~dlkp~Nil~~~~~~~~  159 (277)
T cd05062          83 PTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNA---NKFVHRDLAARNCMVAEDFTVK  159 (277)
T ss_pred             CeEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCcchheEEEcCCCCEE
Confidence            88999999999999999975321       1246788999999999999999998   9999999999999999999999


Q ss_pred             eeeeccceecCCCCcce-eeeeeccccCCCccccccCCCCccccEEEEehhHHHHhh-CCCCCCCCCccHHHHHHHHHHh
Q 005257          509 LGDFGLARMHGHGQVAS-TTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLS-GRRPIEEGKPNLVEMVWELMVQ  586 (705)
Q Consensus       509 L~DFGla~~~~~~~~~~-~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~Ellt-G~~Pf~~~~~~~~~~v~~~~~~  586 (705)
                      |+|||+++......... .....+++.|||||.+.+..++.++|||||||++|||++ |..||......   ........
T Consensus       160 l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~p~~~~~~~---~~~~~~~~  236 (277)
T cd05062         160 IGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGMSNE---QVLRFVME  236 (277)
T ss_pred             ECCCCCccccCCcceeecCCCCccCHhhcChhHhhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHH---HHHHHHHc
Confidence            99999987654322211 112345778999999988889999999999999999999 78888754321   11121212


Q ss_pred             CchhHHHHHhhhcCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHH
Q 005257          587 GKLLDALDARLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLE  637 (705)
Q Consensus       587 ~~~~~~id~~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  637 (705)
                      +..           ...+......+.+++.+||+.+|++||++.|+++.|+
T Consensus       237 ~~~-----------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~  276 (277)
T cd05062         237 GGL-----------LDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIK  276 (277)
T ss_pred             CCc-----------CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHhh
Confidence            111           1122234467899999999999999999999999886

Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh

>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3

Probab=100.00  E-value=3.3e-37  Score=323.04  Aligned_cols=257  Identities=25%  Similarity=0.382  Sum_probs=203.8

Q ss_pred             CCCCcceEEeecCceEEEEEEEcCCCe----EEEEEEeccCCc-hhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceE
Q 005257          364 KGFSEENVIGVGGNGKVYKGVLEGGGA----EIAVKRISHEND-GGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLM  438 (705)
Q Consensus       364 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~----~vavK~i~~~~~-~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~  438 (705)
                      ++|+..+.||+|+||.||+|.+..+++    .+++|.+..... ...+++..|+..+.+++||||+++++++.  ....+
T Consensus         7 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~--~~~~~   84 (279)
T cd05111           7 TELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSGRQTFQEITDHMLAMGSLDHAYIVRLLGICP--GASLQ   84 (279)
T ss_pred             hhceeccccCccCCcceEEEEEcCCCCceeeEEEEeecccccchHHHHHHHHHHHHHhcCCCCCcceEEEEEC--CCccE
Confidence            356778899999999999999876665    478888754332 33467888999999999999999999875  34678


Q ss_pred             EEEeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceec
Q 005257          439 LVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMH  518 (705)
Q Consensus       439 lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~  518 (705)
                      +++||+++|+|.+++.....  .+++..+..++.|++.||.|||+   .+++||||||+|||+++++.+||+|||+++..
T Consensus        85 ~i~e~~~~gsL~~~l~~~~~--~~~~~~~~~i~~qi~~~l~~lH~---~~iiH~dlkp~nili~~~~~~kl~Dfg~~~~~  159 (279)
T cd05111          85 LVTQLSPLGSLLDHVRQHRD--SLDPQRLLNWCVQIAKGMYYLEE---HRMVHRNLAARNILLKSDSIVQIADFGVADLL  159 (279)
T ss_pred             EEEEeCCCCcHHHHHHhccc--CCCHHHHHHHHHHHHHHHHHHHH---CCEeccccCcceEEEcCCCcEEEcCCccceec
Confidence            99999999999999976433  58999999999999999999998   99999999999999999999999999999876


Q ss_pred             CCCCcc-eeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhh-CCCCCCCCCccHHHHHHHHHHhCchhHHHHHh
Q 005257          519 GHGQVA-STTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLS-GRRPIEEGKPNLVEMVWELMVQGKLLDALDAR  596 (705)
Q Consensus       519 ~~~~~~-~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~Ellt-G~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~  596 (705)
                      ...... ......++..|+|||.+.++.++.++|||||||++|||++ |+.||.......   ..+.+..+...      
T Consensus       160 ~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~---~~~~~~~~~~~------  230 (279)
T cd05111         160 YPDDKKYFYSEHKTPIKWMALESILFGRYTHQSDVWSYGVTVWEMMSYGAEPYAGMRPHE---VPDLLEKGERL------  230 (279)
T ss_pred             cCCCcccccCCCCCcccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCCCCCHHH---HHHHHHCCCcC------
Confidence            433221 1223456788999999988899999999999999999998 999997654321   11122222111      


Q ss_pred             hhcCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHhccc
Q 005257          597 LRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLEGKIE  641 (705)
Q Consensus       597 l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~  641 (705)
                           ..+..+...+..++..||..+|++|||+.|+++.|.....
T Consensus       231 -----~~~~~~~~~~~~li~~c~~~~p~~Rps~~el~~~l~~~~~  270 (279)
T cd05111         231 -----AQPQICTIDVYMVMVKCWMIDENVRPTFKELANEFTRMAR  270 (279)
T ss_pred             -----CCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHh
Confidence                 0111223456788999999999999999999999886554

Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r

>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

Probab=100.00  E-value=3.8e-37  Score=336.85  Aligned_cols=252  Identities=21%  Similarity=0.298  Sum_probs=195.8

Q ss_pred             CCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCC---chhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEEEE
Q 005257          365 GFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHEN---DGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVY  441 (705)
Q Consensus       365 ~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~---~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~lV~  441 (705)
                      +|...+.||+|+||.||++....+++.||||++....   ....+.+.+|++++.+++||||+++++.+.. ++.+++||
T Consensus         2 ~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~-~~~~~lv~   80 (376)
T cd05598           2 MFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSFQD-KDNLYFVM   80 (376)
T ss_pred             CceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEEEc-CCEEEEEE
Confidence            6888999999999999999999999999999986432   2334668899999999999999999998876 67899999


Q ss_pred             eeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecCCC
Q 005257          442 DYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHG  521 (705)
Q Consensus       442 E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~~~  521 (705)
                      ||+++|+|.+++.+..   .+++..+..++.||+.||.|||+   .+|+||||||+|||++.++.+||+|||+|..+...
T Consensus        81 E~~~~g~L~~~i~~~~---~~~~~~~~~~~~qi~~al~~lH~---~~ivHrDlkp~Nill~~~~~ikL~DFG~a~~~~~~  154 (376)
T cd05598          81 DYIPGGDMMSLLIRLG---IFEEDLARFYIAELTCAIESVHK---MGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWT  154 (376)
T ss_pred             eCCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHH---CCeEeCCCCHHHEEECCCCCEEEEeCCCCcccccc
Confidence            9999999999997543   58899999999999999999998   99999999999999999999999999997532100


Q ss_pred             C------------------------------------------cceeeeeeccccCCCccccccCCCCccccEEEEehhH
Q 005257          522 Q------------------------------------------VASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILI  559 (705)
Q Consensus       522 ~------------------------------------------~~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl  559 (705)
                      .                                          .......+||+.|||||++.+..++.++|||||||++
T Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil  234 (376)
T cd05598         155 HDSKYYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVIL  234 (376)
T ss_pred             ccccccccccccccccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHcCCCCCcceeeeecccee
Confidence            0                                          0001235799999999999998999999999999999


Q ss_pred             HHHhhCCCCCCCCCccHHHHHHHHHHhCchhHHHHHhhhcCCCCCHHHHHHHHHHHHHcCCCCCCCCC---CHHHHHHH
Q 005257          560 LEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRAKGGFDEDEVERVLHLGLLCAYPDPRARP---TMRQVVKV  635 (705)
Q Consensus       560 ~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP---s~~evl~~  635 (705)
                      |||++|+.||......  +.. ..+......    .........    ...+.+++..|+ .+|.+|+   ++.+++++
T Consensus       235 yell~G~~Pf~~~~~~--~~~-~~i~~~~~~----~~~~~~~~~----s~~~~~li~~l~-~~p~~R~~~~t~~ell~h  301 (376)
T cd05598         235 YEMLVGQPPFLADTPA--ETQ-LKVINWETT----LHIPSQAKL----SREASDLILRLC-CGAEDRLGKNGADEIKAH  301 (376)
T ss_pred             eehhhCCCCCCCCCHH--HHH-HHHhccCcc----ccCCCCCCC----CHHHHHHHHHHh-cCHhhcCCCCCHHHHhCC
Confidence            9999999999865431  111 111111000    000000112    234455555554 4999999   88888765

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.

>PTZ00283 serine/threonine protein kinase; Provisional

Probab=100.00  E-value=1.2e-37  Score=351.61  Aligned_cols=261  Identities=25%  Similarity=0.353  Sum_probs=209.8

Q ss_pred             HHHHHhCCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccC--CchhHHHHHHHHHHhccCCCCCcceeeeeeeeccC
Q 005257          358 EIEAATKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHE--NDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKG  435 (705)
Q Consensus       358 el~~at~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~--~~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~  435 (705)
                      +.....++|...+.||+|+||+||+|....+++.||||++...  .......+.+|+.++..++|+|++++...+.....
T Consensus        26 ~~~~~~~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~  105 (496)
T PTZ00283         26 TAKEQAKKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKDP  105 (496)
T ss_pred             cccccCCCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccCCHHHHHHHHHHHHHHhcCCCCcEEEeecceecccc
Confidence            3444567999999999999999999999989999999998654  33445678899999999999999998876643211


Q ss_pred             -------ceEEEEeeCCCCChhHHHHhcC-CCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCe
Q 005257          436 -------SLMLVYDYMENGSLDKWIFQCD-GSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNG  507 (705)
Q Consensus       436 -------~~~lV~E~~~~gsL~~~L~~~~-~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~  507 (705)
                             .+++||||+++|+|.+++.... ....+++..+..++.|++.||.|||+   ++|+||||||+|||++.++.+
T Consensus       106 ~~~~~~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~---~~IiHrDLKP~NILl~~~~~v  182 (496)
T PTZ00283        106 RNPENVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHS---KHMIHRDIKSANILLCSNGLV  182 (496)
T ss_pred             cCcccceEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHh---CCEecCCCCHHHEEEeCCCCE
Confidence                   3689999999999999997532 23368999999999999999999998   999999999999999999999


Q ss_pred             eeeeeccceecCCCCc-ceeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHh
Q 005257          508 RLGDFGLARMHGHGQV-ASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQ  586 (705)
Q Consensus       508 kL~DFGla~~~~~~~~-~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~  586 (705)
                      ||+|||+++.+..... .......||+.|+|||++.+..++.++|||||||++|||++|+.||.....   ..+......
T Consensus       183 kL~DFGls~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~s~k~DVwSlGvilyeLltG~~Pf~~~~~---~~~~~~~~~  259 (496)
T PTZ00283        183 KLGDFGFSKMYAATVSDDVGRTFCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELLTLKRPFDGENM---EEVMHKTLA  259 (496)
T ss_pred             EEEecccCeeccccccccccccccCCcceeCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCH---HHHHHHHhc
Confidence            9999999987653322 122345799999999999998999999999999999999999999976432   111111111


Q ss_pred             CchhHHHHHhhhcCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 005257          587 GKLLDALDARLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKV  635 (705)
Q Consensus       587 ~~~~~~id~~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  635 (705)
                      +..           ...+......+.+++..||+.||.+||++.+++++
T Consensus       260 ~~~-----------~~~~~~~~~~l~~li~~~L~~dP~~RPs~~ell~~  297 (496)
T PTZ00283        260 GRY-----------DPLPPSISPEMQEIVTALLSSDPKRRPSSSKLLNM  297 (496)
T ss_pred             CCC-----------CCCCCCCCHHHHHHHHHHcccChhhCcCHHHHHhC
Confidence            111           11223345678899999999999999999999864

>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1

Probab=100.00  E-value=8e-38  Score=336.52  Aligned_cols=301  Identities=23%  Similarity=0.320  Sum_probs=226.8

Q ss_pred             hCCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCCc-hhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEEEE
Q 005257          363 TKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHEND-GGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVY  441 (705)
Q Consensus       363 t~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~-~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~lV~  441 (705)
                      .++|+..++||+|+||.||++.+..++..+|+|.+..... .....+.+|+++++.++||||++++++|.. ++.+++||
T Consensus         4 ~~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-~~~~~lv~   82 (333)
T cd06650           4 DDDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYS-DGEISICM   82 (333)
T ss_pred             hhhhheeccccCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCcccceeEEEEE-CCEEEEEE
Confidence            4678999999999999999999998899999998876533 345678999999999999999999999887 67899999


Q ss_pred             eeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecCCC
Q 005257          442 DYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHG  521 (705)
Q Consensus       442 E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~~~  521 (705)
                      ||+++|+|.+++....   .+++..+..++.|++.||.|||+  ..+++||||||+|||+++++.+||+|||++......
T Consensus        83 e~~~~~~L~~~l~~~~---~~~~~~~~~~~~~l~~~l~~lH~--~~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~  157 (333)
T cd06650          83 EHMDGGSLDQVLKKAG---RIPEQILGKVSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS  157 (333)
T ss_pred             ecCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHh--cCCEEecCCChhhEEEcCCCCEEEeeCCcchhhhhh
Confidence            9999999999997543   58899999999999999999997  247999999999999999999999999998765332


Q ss_pred             CcceeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhHHHHHhhhcCC
Q 005257          522 QVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRAKG  601 (705)
Q Consensus       522 ~~~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~l~~~~  601 (705)
                      .   .....|+..|+|||++.+..++.++|||||||++|||++|+.||.................+.....         
T Consensus       158 ~---~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~---------  225 (333)
T cd06650         158 M---ANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAIGRYPIPPPDAKELELMFGCPVEGDPAES---------  225 (333)
T ss_pred             c---cccCCCCccccCHHHhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcchhHHHHHhcCcccCCcccc---------
Confidence            1   1234689999999999988899999999999999999999999976443211111110011111000         


Q ss_pred             CCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHhcccc-CCCCCcchhhHHHHHHhhccccccccccccccCCCCCC
Q 005257          602 GFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLEGKIEA-GIENETEDMDAYLLQQVKSKDMWANYSRSFGYGYATHP  680 (705)
Q Consensus       602 ~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~hp  680 (705)
                          ............|....|..||++.. .+........ .+..........+.+++.++..++|..|.+..+++.||
T Consensus       226 ----~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~P~~Rpt~~ell~h~  300 (333)
T cd06650         226 ----ETSPRPRPPGRPLSSYGPDSRPPMAI-FELLDYIVNEPPPKLPSGVFGAEFQDFVNKCLIKNPAERADLKQLMVHA  300 (333)
T ss_pred             ----ccCcccCCccchhhhhcccccccccH-HHHHHHHhcCCCccCCCCCcCHHHHHHHHHhccCCcccCcCHHHHhhCH
Confidence                00011112233455567899998742 2222222111 11111222345577888899999999999999999999


Q ss_pred             Cccccc
Q 005257          681 TFHDIR  686 (705)
Q Consensus       681 ~f~~~~  686 (705)
                      ||....
T Consensus       301 ~~~~~~  306 (333)
T cd06650         301 FIKRSE  306 (333)
T ss_pred             HHhcCc
Confidence            997543

Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst

>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=3.2e-38  Score=327.14  Aligned_cols=265  Identities=26%  Similarity=0.443  Sum_probs=206.0

Q ss_pred             HhCCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCCchhHHHHHHHHHHhcc--CCCCCcceeeeeeeeccC---c
Q 005257          362 ATKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGR--LKHKSLVGLRGWCKREKG---S  436 (705)
Q Consensus       362 at~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~~~~~~~~~Ei~~l~~--l~Hpniv~l~g~~~~~~~---~  436 (705)
                      ..++....+.||+|.||.||+|.++  |+.||||++...   +.+.+.+|.++.+.  |||+||+.+++.-..+.+   .
T Consensus       209 iarqI~L~e~IGkGRyGEVwrG~wr--Ge~VAVKiF~sr---dE~SWfrEtEIYqTvmLRHENILgFIaaD~~~~gs~TQ  283 (513)
T KOG2052|consen  209 IARQIVLQEIIGKGRFGEVWRGRWR--GEDVAVKIFSSR---DERSWFRETEIYQTVMLRHENILGFIAADNKDNGSWTQ  283 (513)
T ss_pred             hhheeEEEEEecCccccceeecccc--CCceEEEEeccc---chhhhhhHHHHHHHHHhccchhhhhhhccccCCCceEE
Confidence            3456778899999999999999998  788999998533   34567777777766  499999999986543232   5


Q ss_pred             eEEEEeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcC-----CCCCeeecCCCCCCeEEccCCCeeeee
Q 005257          437 LMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEG-----WEKKVLHRDIKSSNVLLDKEMNGRLGD  511 (705)
Q Consensus       437 ~~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~-----~~~~iiHrDLkp~NILld~~~~~kL~D  511 (705)
                      ++||.+|.+.|||.|||..    ..++....++++..+|.||++||.+     .++.|.|||||+.|||+..++.+.|+|
T Consensus       284 LwLvTdYHe~GSL~DyL~r----~tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKkn~~C~IAD  359 (513)
T KOG2052|consen  284 LWLVTDYHEHGSLYDYLNR----NTVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIAD  359 (513)
T ss_pred             EEEeeecccCCcHHHHHhh----ccCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEccCCcEEEee
Confidence            8999999999999999964    3799999999999999999999954     368899999999999999999999999


Q ss_pred             eccceecCCCCcc---eeeeeeccccCCCccccccC------CCCccccEEEEehhHHHHhhC----------CCCCCC-
Q 005257          512 FGLARMHGHGQVA---STTRVVGTVGYLAPEVFSSG------RASTQTDVFGFGILILEVLSG----------RRPIEE-  571 (705)
Q Consensus       512 FGla~~~~~~~~~---~~~~~~gt~~y~APE~~~~~------~~s~ksDVwS~Gvvl~ElltG----------~~Pf~~-  571 (705)
                      +|||.........   .....+||.+|||||++...      ..-..+||||||.|+||++..          +.||.+ 
T Consensus       360 LGLAv~h~~~t~~idi~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVlWEiarRc~~ggi~eey~~Pyyd~  439 (513)
T KOG2052|consen  360 LGLAVRHDSDTDTIDIPPNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGLVLWEIARRCESGGIVEEYQLPYYDV  439 (513)
T ss_pred             ceeeEEecccCCcccCCCCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHHHHhhcCCEehhhcCCcccC
Confidence            9999876654221   12346899999999999653      123468999999999999862          356654 


Q ss_pred             --CCccHHHHHHHHHHhCchhHHHHHhhhcCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHhccc
Q 005257          572 --GKPNLVEMVWELMVQGKLLDALDARLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLEGKIE  641 (705)
Q Consensus       572 --~~~~~~~~v~~~~~~~~~~~~id~~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~  641 (705)
                        .+++.     +.|++--..+.+.+.+.. ...+.+.+..+.++++.||..+|..|-|+-.+.+.|.++.+
T Consensus       440 Vp~DPs~-----eeMrkVVCv~~~RP~ipn-rW~s~~~l~~m~klMkeCW~~Np~aRltALriKKtl~~l~~  505 (513)
T KOG2052|consen  440 VPSDPSF-----EEMRKVVCVQKLRPNIPN-RWKSDPALRVMAKLMKECWYANPAARLTALRIKKTLAKLSN  505 (513)
T ss_pred             CCCCCCH-----HHHhcceeecccCCCCCc-ccccCHHHHHHHHHHHHhhcCCchhhhHHHHHHHHHHHHhc
Confidence              22322     222332233333333332 22355778899999999999999999999999999987664

>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

Probab=100.00  E-value=2.6e-37  Score=330.05  Aligned_cols=242  Identities=23%  Similarity=0.404  Sum_probs=194.6

Q ss_pred             eEEeecCceEEEEEEEcCCCeEEEEEEeccCC---chhHHHHHHHHHHhccC-CCCCcceeeeeeeeccCceEEEEeeCC
Q 005257          370 NVIGVGGNGKVYKGVLEGGGAEIAVKRISHEN---DGGTRAFLAEISSLGRL-KHKSLVGLRGWCKREKGSLMLVYDYME  445 (705)
Q Consensus       370 ~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~---~~~~~~~~~Ei~~l~~l-~Hpniv~l~g~~~~~~~~~~lV~E~~~  445 (705)
                      +.||+|+||.||+|.+..+++.||||+++...   ....+.+..|..++..+ +||||+++++++.. ++.+++||||++
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~-~~~~~lv~ey~~   79 (316)
T cd05619           1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQT-KENLFFVMEYLN   79 (316)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEe-CCEEEEEEeCCC
Confidence            46999999999999999989999999987542   23345567788888764 89999999998876 678999999999


Q ss_pred             CCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecCCCCcce
Q 005257          446 NGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVAS  525 (705)
Q Consensus       446 ~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~~~~~~~  525 (705)
                      +|+|.+++....   .+++.++..++.|++.||.|||+   .+|+||||||+|||++.++.+||+|||+++....... .
T Consensus        80 ~g~L~~~l~~~~---~~~~~~~~~~~~qi~~al~~LH~---~~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~-~  152 (316)
T cd05619          80 GGDLMFHIQSCH---KFDLPRATFYAAEIICGLQFLHS---KGIVYRDLKLDNILLDTDGHIKIADFGMCKENMLGDA-K  152 (316)
T ss_pred             CCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHh---CCeEeCCCCHHHEEECCCCCEEEccCCcceECCCCCC-c
Confidence            999999997532   58899999999999999999998   9999999999999999999999999999875432221 2


Q ss_pred             eeeeeccccCCCccccccCCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhHHHHHhhhcCCCCCH
Q 005257          526 TTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRAKGGFDE  605 (705)
Q Consensus       526 ~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~l~~~~~~~~  605 (705)
                      .....||+.|+|||++.+..++.++|||||||++|||++|+.||......   ...+.+..+.            ..++.
T Consensus       153 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~---~~~~~i~~~~------------~~~~~  217 (316)
T cd05619         153 TCTFCGTPDYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSPFHGHDEE---ELFQSIRMDN------------PCYPR  217 (316)
T ss_pred             eeeecCCccccCHHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCCCHH---HHHHHHHhCC------------CCCCc
Confidence            23467999999999999889999999999999999999999999764421   1111111111            11222


Q ss_pred             HHHHHHHHHHHHcCCCCCCCCCCHH-HHHH
Q 005257          606 DEVERVLHLGLLCAYPDPRARPTMR-QVVK  634 (705)
Q Consensus       606 ~~~~~l~~l~~~Cl~~dP~~RPs~~-evl~  634 (705)
                      .....+.+++..||+.||++||++. ++.+
T Consensus       218 ~~~~~~~~li~~~l~~~P~~R~~~~~~l~~  247 (316)
T cd05619         218 WLTREAKDILVKLFVREPERRLGVKGDIRQ  247 (316)
T ss_pred             cCCHHHHHHHHHHhccCHhhcCCChHHHHc
Confidence            2335678899999999999999997 5543

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in

>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

Probab=100.00  E-value=2e-37  Score=331.03  Aligned_cols=241  Identities=23%  Similarity=0.365  Sum_probs=194.4

Q ss_pred             eEEeecCceEEEEEEEcCCCeEEEEEEeccCC---chhHHHHHHHHHHhccC-CCCCcceeeeeeeeccCceEEEEeeCC
Q 005257          370 NVIGVGGNGKVYKGVLEGGGAEIAVKRISHEN---DGGTRAFLAEISSLGRL-KHKSLVGLRGWCKREKGSLMLVYDYME  445 (705)
Q Consensus       370 ~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~---~~~~~~~~~Ei~~l~~l-~Hpniv~l~g~~~~~~~~~~lV~E~~~  445 (705)
                      +.||+|+||.||+|.+..+++.||+|+++...   ....+.+..|..++..+ +||||+++++++.. ++.+++||||++
T Consensus         1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~-~~~~~lv~E~~~   79 (316)
T cd05620           1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQT-KEHLFFVMEFLN   79 (316)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEe-CCEEEEEECCCC
Confidence            46999999999999999999999999987542   23445667788888754 89999999998876 678999999999


Q ss_pred             CCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecCCCCcce
Q 005257          446 NGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVAS  525 (705)
Q Consensus       446 ~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~~~~~~~  525 (705)
                      +|+|..++....   .+++.++..++.|++.||+|||+   ++|+||||||+|||++.++.+||+|||+++....... .
T Consensus        80 ~g~L~~~i~~~~---~~~~~~~~~~~~qi~~~l~~lH~---~~ivHrDlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~-~  152 (316)
T cd05620          80 GGDLMFHIQDKG---RFDLYRATFYAAEIVCGLQFLHS---KGIIYRDLKLDNVMLDRDGHIKIADFGMCKENVFGDN-R  152 (316)
T ss_pred             CCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHH---CCeEecCCCHHHeEECCCCCEEeCccCCCeecccCCC-c
Confidence            999999886532   58999999999999999999998   9999999999999999999999999999875332221 2


Q ss_pred             eeeeeccccCCCccccccCCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhHHHHHhhhcCCCCCH
Q 005257          526 TTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRAKGGFDE  605 (705)
Q Consensus       526 ~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~l~~~~~~~~  605 (705)
                      .....||+.|+|||++.+..++.++|||||||++|||++|+.||......   ...+.+..+.            ..++.
T Consensus       153 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~Pf~~~~~~---~~~~~~~~~~------------~~~~~  217 (316)
T cd05620         153 ASTFCGTPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGDDED---ELFESIRVDT------------PHYPR  217 (316)
T ss_pred             eeccCCCcCccCHHHHcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHH---HHHHHHHhCC------------CCCCC
Confidence            33467999999999999989999999999999999999999999765421   1122221111            11222


Q ss_pred             HHHHHHHHHHHHcCCCCCCCCCCHH-HHH
Q 005257          606 DEVERVLHLGLLCAYPDPRARPTMR-QVV  633 (705)
Q Consensus       606 ~~~~~l~~l~~~Cl~~dP~~RPs~~-evl  633 (705)
                      .....+.+++..||+.||++||++. ++.
T Consensus       218 ~~~~~~~~li~~~l~~dP~~R~~~~~~~~  246 (316)
T cd05620         218 WITKESKDILEKLFERDPTRRLGVVGNIR  246 (316)
T ss_pred             CCCHHHHHHHHHHccCCHHHcCCChHHHH
Confidence            2345678899999999999999985 554

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I

>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

Probab=100.00  E-value=3.2e-37  Score=325.03  Aligned_cols=259  Identities=23%  Similarity=0.425  Sum_probs=209.5

Q ss_pred             CCCcceEEeecCceEEEEEEEcC-----CCeEEEEEEeccCCchhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEE
Q 005257          365 GFSEENVIGVGGNGKVYKGVLEG-----GGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLML  439 (705)
Q Consensus       365 ~f~~~~~LG~G~fg~Vy~~~~~~-----~~~~vavK~i~~~~~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~l  439 (705)
                      +|...+.||+|+||.||+|....     ++..+++|.+........+.+.+|++++++++||||+++++++.. ....++
T Consensus         6 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~l   84 (291)
T cd05094           6 DIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCGD-GDPLIM   84 (291)
T ss_pred             HeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCccHHHHHHHHHHHHHHhcCCCCCcceEEEEEcc-CCceEE
Confidence            46778899999999999998642     346799999876665566789999999999999999999998876 667899


Q ss_pred             EEeeCCCCChhHHHHhcCC-------------CCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCC
Q 005257          440 VYDYMENGSLDKWIFQCDG-------------SMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMN  506 (705)
Q Consensus       440 V~E~~~~gsL~~~L~~~~~-------------~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~  506 (705)
                      ||||+++++|.+++.....             ...+++..++.++.|++.||+|||+   ++++||||||+||+++.++.
T Consensus        85 v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~---~~i~H~dlkp~Nil~~~~~~  161 (291)
T cd05094          85 VFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLAS---QHFVHRDLATRNCLVGANLL  161 (291)
T ss_pred             EEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHh---CCeeecccCcceEEEccCCc
Confidence            9999999999999975321             2258999999999999999999998   99999999999999999999


Q ss_pred             eeeeeeccceecCCCCcc-eeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhh-CCCCCCCCCccHHHHHHHHH
Q 005257          507 GRLGDFGLARMHGHGQVA-STTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLS-GRRPIEEGKPNLVEMVWELM  584 (705)
Q Consensus       507 ~kL~DFGla~~~~~~~~~-~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~Ellt-G~~Pf~~~~~~~~~~v~~~~  584 (705)
                      +||+|||+++........ ......++..|+|||.+.+..++.++|||||||++|||++ |+.||......   .+.+.+
T Consensus       162 ~~l~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~---~~~~~~  238 (291)
T cd05094         162 VKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNT---EVIECI  238 (291)
T ss_pred             EEECCCCcccccCCCceeecCCCCCcceeecChHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH---HHHHHH
Confidence            999999999765433211 1223456788999999988889999999999999999998 99998764431   122222


Q ss_pred             HhCchhHHHHHhhhcCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHhccc
Q 005257          585 VQGKLLDALDARLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLEGKIE  641 (705)
Q Consensus       585 ~~~~~~~~id~~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~  641 (705)
                      ..+...           ......+..+.+++.+||+.+|++||++.++++.|+....
T Consensus       239 ~~~~~~-----------~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~v~~~l~~~~~  284 (291)
T cd05094         239 TQGRVL-----------ERPRVCPKEVYDIMLGCWQREPQQRLNIKEIYKILHALGK  284 (291)
T ss_pred             hCCCCC-----------CCCccCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHh
Confidence            222221           1122334678899999999999999999999999987654

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n

>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

Probab=100.00  E-value=1.5e-37  Score=325.91  Aligned_cols=246  Identities=24%  Similarity=0.350  Sum_probs=197.3

Q ss_pred             EeecCceEEEEEEEcCCCeEEEEEEeccCC---chhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEEEEeeCCCCC
Q 005257          372 IGVGGNGKVYKGVLEGGGAEIAVKRISHEN---DGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGS  448 (705)
Q Consensus       372 LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~---~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~lV~E~~~~gs  448 (705)
                      ||+|+||+||++.+..+++.+|+|++....   ....+.+..|+++++.++||||+++.+++.. +...++||||+++|+
T Consensus         1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~-~~~~~lv~e~~~~g~   79 (280)
T cd05608           1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQT-KTDLCLVMTIMNGGD   79 (280)
T ss_pred             CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEcC-CCeEEEEEeCCCCCC
Confidence            699999999999999899999999986542   2234567889999999999999999988765 678999999999999


Q ss_pred             hhHHHHhcC-CCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecCCCCcceee
Q 005257          449 LDKWIFQCD-GSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTT  527 (705)
Q Consensus       449 L~~~L~~~~-~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~~~~~~~~~  527 (705)
                      |..++.... ....+++..+..++.|++.||.|||+   .+|+||||||+||+++.++.+||+|||++......... ..
T Consensus        80 L~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~-~~  155 (280)
T cd05608          80 LRYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQ---RRIIYRDLKPENVLLDNDGNVRISDLGLAVELKDGQSK-TK  155 (280)
T ss_pred             HHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEECCCCCEEEeeCccceecCCCCcc-cc
Confidence            998886532 23368999999999999999999998   99999999999999999999999999999866543322 23


Q ss_pred             eeeccccCCCccccccCCCCccccEEEEehhHHHHhhCCCCCCCCCccHH-HHHHHHHHhCchhHHHHHhhhcCCCCCHH
Q 005257          528 RVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLV-EMVWELMVQGKLLDALDARLRAKGGFDED  606 (705)
Q Consensus       528 ~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~-~~v~~~~~~~~~~~~id~~l~~~~~~~~~  606 (705)
                      ...||+.|+|||++.+..++.++|||||||++|||++|+.||........ .....            ..+.....++..
T Consensus       156 ~~~g~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~------------~~~~~~~~~~~~  223 (280)
T cd05608         156 GYAGTPGFMAPELLQGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQ------------RILNDSVTYPDK  223 (280)
T ss_pred             ccCCCcCccCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCcchhHHHHHH------------hhcccCCCCccc
Confidence            35789999999999999999999999999999999999999976432111 11111            111111122334


Q ss_pred             HHHHHHHHHHHcCCCCCCCCC-----CHHHHHH
Q 005257          607 EVERVLHLGLLCAYPDPRARP-----TMRQVVK  634 (705)
Q Consensus       607 ~~~~l~~l~~~Cl~~dP~~RP-----s~~evl~  634 (705)
                      ....+.+++..||+.||++||     ++.++++
T Consensus       224 ~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~l~  256 (280)
T cd05608         224 FSPASKSFCEALLAKDPEKRLGFRDGNCDGLRT  256 (280)
T ss_pred             CCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHhc
Confidence            456788999999999999999     5666665

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g

>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

Probab=100.00  E-value=2.8e-37  Score=325.03  Aligned_cols=260  Identities=23%  Similarity=0.447  Sum_probs=209.3

Q ss_pred             CCCCcceEEeecCceEEEEEEEc-----CCCeEEEEEEeccCCchhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceE
Q 005257          364 KGFSEENVIGVGGNGKVYKGVLE-----GGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLM  438 (705)
Q Consensus       364 ~~f~~~~~LG~G~fg~Vy~~~~~-----~~~~~vavK~i~~~~~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~  438 (705)
                      .+|...+.||+|+||.||++...     .++..+|+|.+........+.+.+|+.++.+++||||+++++++.. .+..+
T Consensus         5 ~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~   83 (288)
T cd05093           5 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVE-GDPLI   83 (288)
T ss_pred             HHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcCHHHHHHHHHHHHHHHhCCCCCcceEEEEEec-CCccE
Confidence            45778899999999999999852     3456799999876666667789999999999999999999998876 67889


Q ss_pred             EEEeeCCCCChhHHHHhcC----------CCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCee
Q 005257          439 LVYDYMENGSLDKWIFQCD----------GSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGR  508 (705)
Q Consensus       439 lV~E~~~~gsL~~~L~~~~----------~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~k  508 (705)
                      +||||+++++|.+++....          ....+++.+++.++.|++.||+|||+   .+++||||||+||++++++.+|
T Consensus        84 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~---~~i~H~dlkp~Nili~~~~~~k  160 (288)
T cd05093          84 MVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLAS---QHFVHRDLATRNCLVGENLLVK  160 (288)
T ss_pred             EEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHh---CCeeecccCcceEEEccCCcEE
Confidence            9999999999999997532          12258999999999999999999998   9999999999999999999999


Q ss_pred             eeeeccceecCCCCc-ceeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhh-CCCCCCCCCccHHHHHHHHHHh
Q 005257          509 LGDFGLARMHGHGQV-ASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLS-GRRPIEEGKPNLVEMVWELMVQ  586 (705)
Q Consensus       509 L~DFGla~~~~~~~~-~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~Ellt-G~~Pf~~~~~~~~~~v~~~~~~  586 (705)
                      |+|||+++....... .......++..|+|||.+.+..++.++|||||||++|||++ |..||.....   ......+..
T Consensus       161 l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~~l~t~g~~p~~~~~~---~~~~~~i~~  237 (288)
T cd05093         161 IGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSN---NEVIECITQ  237 (288)
T ss_pred             eccCCccccccCCceeecCCCCCccccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCH---HHHHHHHHc
Confidence            999999986543221 11122345778999999988889999999999999999998 8999875432   112222233


Q ss_pred             CchhHHHHHhhhcCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHhccc
Q 005257          587 GKLLDALDARLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLEGKIE  641 (705)
Q Consensus       587 ~~~~~~id~~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~  641 (705)
                      +....           .+......+.+++..||++||.+|||+.++.+.|+....
T Consensus       238 ~~~~~-----------~~~~~~~~l~~li~~~l~~~p~~Rpt~~~v~~~l~~~~~  281 (288)
T cd05093         238 GRVLQ-----------RPRTCPKEVYDLMLGCWQREPHMRLNIKEIHSLLQNLAK  281 (288)
T ss_pred             CCcCC-----------CCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHHH
Confidence            22111           111233568999999999999999999999999987655

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly

>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]

Probab=100.00  E-value=4e-38  Score=304.40  Aligned_cols=266  Identities=24%  Similarity=0.281  Sum_probs=212.5

Q ss_pred             HHhCCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCCchhHHHHHHHHHHhccCCCCCcceeeeeeeec----cCc
Q 005257          361 AATKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKRE----KGS  436 (705)
Q Consensus       361 ~at~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~----~~~  436 (705)
                      ...++|.+.+.||+|||+-||.+..-.++..+|+|++.....++.+..++|++..++++|||++++++++..+    +..
T Consensus        18 In~~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D~~~~   97 (302)
T KOG2345|consen   18 INNKRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHSQEDIEEALREIDNHRKFNSPNVLRLVDHQLREEKDGKHE   97 (302)
T ss_pred             EcCceEEEeeeecCCCceeeeeecccCcccchhhheeeccchHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhccCcee
Confidence            4457899999999999999999998888999999999888878888999999999999999999999987642    235


Q ss_pred             eEEEEeeCCCCChhHHHHhcCC-CCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccc
Q 005257          437 LMLVYDYMENGSLDKWIFQCDG-SMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLA  515 (705)
Q Consensus       437 ~~lV~E~~~~gsL~~~L~~~~~-~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla  515 (705)
                      .||+++|+..|+|.+.+...+. +..+++.+++.|+.++++||.+||+ ...++.||||||.|||+.+.+.++|.|||.+
T Consensus        98 ~yll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~-~~~~yAH~DiKP~NILls~~~~~vl~D~GS~  176 (302)
T KOG2345|consen   98 AYLLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHE-KEPPYAHRDIKPANILLSDSGLPVLMDLGSA  176 (302)
T ss_pred             EEEEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhc-cCCcccccCCCcceeEecCCCceEEEeccCc
Confidence            8999999999999999987543 3379999999999999999999998 2335999999999999999999999999998


Q ss_pred             eecCCCCcc--------eeeeeeccccCCCccccc---cCCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHH
Q 005257          516 RMHGHGQVA--------STTRVVGTVGYLAPEVFS---SGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELM  584 (705)
Q Consensus       516 ~~~~~~~~~--------~~~~~~gt~~y~APE~~~---~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~  584 (705)
                      +...-.-..        ....-..|..|+|||.+.   +...++++|||||||+||+|+.|..||+..           .
T Consensus       177 ~~a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe~~-----------~  245 (302)
T KOG2345|consen  177 TQAPIQIEGSRQALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMMFGESPFERI-----------Y  245 (302)
T ss_pred             cccceEeechHHHHHHHHHHHHhCCCcccCchheecccCcccccccchhhhhHHHHHHHHcCCcchHH-----------h
Confidence            754321110        011124588999999984   456789999999999999999999999641           1


Q ss_pred             HhCc-hhHHHHH-hhhcCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHhcc
Q 005257          585 VQGK-LLDALDA-RLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLEGKI  640 (705)
Q Consensus       585 ~~~~-~~~~id~-~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~  640 (705)
                      .+|. +.-++.. .+....  .....+.+.+++.+|++.||.+||+..+++..++.++
T Consensus       246 ~~GgSlaLAv~n~q~s~P~--~~~yse~l~~lik~mlqvdP~qRP~i~~ll~~~d~Li  301 (302)
T KOG2345|consen  246 QQGGSLALAVQNAQISIPN--SSRYSEALHQLIKSMLQVDPNQRPTIPELLSKLDDLI  301 (302)
T ss_pred             hcCCeEEEeeeccccccCC--CCCccHHHHHHHHHHhcCCcccCCCHHHHHHHHHhhc
Confidence            1222 2111111 111111  1125678999999999999999999999999887543

>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases

Probab=100.00  E-value=8e-37  Score=317.83  Aligned_cols=257  Identities=23%  Similarity=0.433  Sum_probs=203.5

Q ss_pred             CCcceEEeecCceEEEEEEEcCC---CeEEEEEEeccCC--chhHHHHHHHHHHhccCCCCCcceeeeeeeeccC-----
Q 005257          366 FSEENVIGVGGNGKVYKGVLEGG---GAEIAVKRISHEN--DGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKG-----  435 (705)
Q Consensus       366 f~~~~~LG~G~fg~Vy~~~~~~~---~~~vavK~i~~~~--~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~-----  435 (705)
                      |...+.||+|+||.||+|.+..+   +..||+|+++...  ......+.+|++.++.++||||+++++++.....     
T Consensus         1 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~   80 (273)
T cd05035           1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQKIP   80 (273)
T ss_pred             CccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCccccCc
Confidence            45678899999999999998653   3789999987542  3345678999999999999999999998865332     


Q ss_pred             ceEEEEeeCCCCChhHHHHhcC---CCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeee
Q 005257          436 SLMLVYDYMENGSLDKWIFQCD---GSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDF  512 (705)
Q Consensus       436 ~~~lV~E~~~~gsL~~~L~~~~---~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DF  512 (705)
                      ..++++||+++|+|..++....   ....+++..+..++.|++.||.|||+   .+++||||||+||++++++.+||+||
T Consensus        81 ~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~---~~i~H~dlkp~Nil~~~~~~~kl~df  157 (273)
T cd05035          81 KPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSN---RNFIHRDLAARNCMLREDMTVCVADF  157 (273)
T ss_pred             ccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHh---CCeeccccchheEEECCCCeEEECCc
Confidence            3789999999999999986532   22368999999999999999999998   99999999999999999999999999


Q ss_pred             ccceecCCCCcce-eeeeeccccCCCccccccCCCCccccEEEEehhHHHHhh-CCCCCCCCCccHHHHHHHHHHhCchh
Q 005257          513 GLARMHGHGQVAS-TTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLS-GRRPIEEGKPNLVEMVWELMVQGKLL  590 (705)
Q Consensus       513 Gla~~~~~~~~~~-~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~Ellt-G~~Pf~~~~~~~~~~v~~~~~~~~~~  590 (705)
                      |+++......... .....++..|+|||.+.+..++.++|||||||++|||++ |..||......   ...+....+.. 
T Consensus       158 g~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~SlG~il~el~~~g~~p~~~~~~~---~~~~~~~~~~~-  233 (273)
T cd05035         158 GLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGQTPYPGVENH---EIYDYLRHGNR-  233 (273)
T ss_pred             cceeeccccccccccccccCCccccCHhhcccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHH---HHHHHHHcCCC-
Confidence            9998764432211 111234678999999988889999999999999999999 88888654321   11122222111 


Q ss_pred             HHHHHhhhcCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHhc
Q 005257          591 DALDARLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLEGK  639 (705)
Q Consensus       591 ~~id~~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~  639 (705)
                                ...+......+.+++..||+.||++||++.|+++.|+..
T Consensus       234 ----------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~e~~~~l~~~  272 (273)
T cd05035         234 ----------LKQPEDCLDELYDLMYSCWRADPKDRPTFTKLREVLENI  272 (273)
T ss_pred             ----------CCCCcCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence                      112234456789999999999999999999999999854

Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu

>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl

Probab=100.00  E-value=4.2e-37  Score=320.18  Aligned_cols=257  Identities=24%  Similarity=0.434  Sum_probs=202.8

Q ss_pred             CCcceEEeecCceEEEEEEEcCCCe--EEEEEEeccC--CchhHHHHHHHHHHhccCCCCCcceeeeeeeec-----cCc
Q 005257          366 FSEENVIGVGGNGKVYKGVLEGGGA--EIAVKRISHE--NDGGTRAFLAEISSLGRLKHKSLVGLRGWCKRE-----KGS  436 (705)
Q Consensus       366 f~~~~~LG~G~fg~Vy~~~~~~~~~--~vavK~i~~~--~~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~-----~~~  436 (705)
                      |...+.||+|+||.||+|.+..++.  .+|+|.++..  .....+.+.+|+++++.++||||++++++|...     ...
T Consensus         1 ~~i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~   80 (272)
T cd05075           1 LALGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYPS   80 (272)
T ss_pred             CccccccCcccCceEEEeEEccCCCeeeEEEEecccCcCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccCCCC
Confidence            3457889999999999999876664  6999988654  344567889999999999999999999987532     124


Q ss_pred             eEEEEeeCCCCChhHHHHhcC---CCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeec
Q 005257          437 LMLVYDYMENGSLDKWIFQCD---GSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFG  513 (705)
Q Consensus       437 ~~lV~E~~~~gsL~~~L~~~~---~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFG  513 (705)
                      .+++|||+++|+|.+++....   ....+++..+..++.|++.||+|||+   ++|+||||||+|||+++++.+||+|||
T Consensus        81 ~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~kl~Dfg  157 (272)
T cd05075          81 PVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSS---KSFIHRDLAARNCMLNENMNVCVADFG  157 (272)
T ss_pred             cEEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHH---CCeeccccchhheEEcCCCCEEECCCC
Confidence            689999999999999885321   22358999999999999999999998   999999999999999999999999999


Q ss_pred             cceecCCCCcce-eeeeeccccCCCccccccCCCCccccEEEEehhHHHHhh-CCCCCCCCCccHHHHHHHHHHhCchhH
Q 005257          514 LARMHGHGQVAS-TTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLS-GRRPIEEGKPNLVEMVWELMVQGKLLD  591 (705)
Q Consensus       514 la~~~~~~~~~~-~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~Ellt-G~~Pf~~~~~~~~~~v~~~~~~~~~~~  591 (705)
                      +++......... .....+++.|+|||.+.+..++.++|||||||++|||++ |+.||.....   ....+....+... 
T Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~---~~~~~~~~~~~~~-  233 (272)
T cd05075         158 LSKKIYNGDYYRQGRIAKMPVKWIAIESLADRVYTTKSDVWSFGVTMWEIATRGQTPYPGVEN---SEIYDYLRQGNRL-  233 (272)
T ss_pred             cccccCcccceecCCcccCCcccCCHHHccCCCcChHHHHHHHHHHHHHHHcCCCCCCCCCCH---HHHHHHHHcCCCC-
Confidence            998764432211 112245678999999998889999999999999999999 8889865432   1222223222211 


Q ss_pred             HHHHhhhcCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHhc
Q 005257          592 ALDARLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLEGK  639 (705)
Q Consensus       592 ~id~~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~  639 (705)
                                ..+......+.+++..||++||++|||+.++++.|+..
T Consensus       234 ----------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~~~  271 (272)
T cd05075         234 ----------KQPPDCLDGLYSLMSSCWLLNPKDRPSFETLRCELEKA  271 (272)
T ss_pred             ----------CCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence                      11223445688999999999999999999999999853

Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor

>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

Probab=100.00  E-value=2.8e-37  Score=330.14  Aligned_cols=243  Identities=25%  Similarity=0.392  Sum_probs=197.9

Q ss_pred             eEEeecCceEEEEEEEcCCCeEEEEEEeccC---CchhHHHHHHHHHHhccC-CCCCcceeeeeeeeccCceEEEEeeCC
Q 005257          370 NVIGVGGNGKVYKGVLEGGGAEIAVKRISHE---NDGGTRAFLAEISSLGRL-KHKSLVGLRGWCKREKGSLMLVYDYME  445 (705)
Q Consensus       370 ~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~---~~~~~~~~~~Ei~~l~~l-~Hpniv~l~g~~~~~~~~~~lV~E~~~  445 (705)
                      +.||+|+||+||+|.+..+++.||||+++..   .......+..|++++..+ +||||+++++++.. .+.+++||||++
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~-~~~~~lv~e~~~   79 (318)
T cd05570           1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQT-KDRLFFVMEYVN   79 (318)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEc-CCEEEEEEcCCC
Confidence            4699999999999999988999999998754   233455678899998888 79999999998776 678999999999


Q ss_pred             CCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecCCCCcce
Q 005257          446 NGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVAS  525 (705)
Q Consensus       446 ~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~~~~~~~  525 (705)
                      +|+|..++.+..   .+++.++..++.|++.||.|||+   .+++||||||+|||+++++.+||+|||+++....... .
T Consensus        80 ~~~L~~~~~~~~---~l~~~~~~~~~~qi~~~l~~LH~---~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~-~  152 (318)
T cd05570          80 GGDLMFHIQRSG---RFDEPRARFYAAEIVLGLQFLHE---RGIIYRDLKLDNVLLDSEGHIKIADFGMCKEGILGGV-T  152 (318)
T ss_pred             CCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHh---CCeEccCCCHHHeEECCCCcEEecccCCCeecCcCCC-c
Confidence            999999886543   68999999999999999999998   9999999999999999999999999999875322221 2


Q ss_pred             eeeeeccccCCCccccccCCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhHHHHHhhhcCCCCCH
Q 005257          526 TTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRAKGGFDE  605 (705)
Q Consensus       526 ~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~l~~~~~~~~  605 (705)
                      .....|++.|+|||++.+..++.++|||||||++|||++|+.||.....   ......+..+.            ..++.
T Consensus       153 ~~~~~g~~~y~aPE~~~~~~~~~~~DiwslGvil~~l~~G~~pf~~~~~---~~~~~~i~~~~------------~~~~~  217 (318)
T cd05570         153 TSTFCGTPDYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPFEGDDE---DELFQSILEDE------------VRYPR  217 (318)
T ss_pred             ccceecCccccCHHHhcCCCCCcchhhhhHHHHHHHHhhCCCCCCCCCH---HHHHHHHHcCC------------CCCCC
Confidence            2335789999999999998999999999999999999999999976442   11112221111            11222


Q ss_pred             HHHHHHHHHHHHcCCCCCCCCCCH-----HHHHHH
Q 005257          606 DEVERVLHLGLLCAYPDPRARPTM-----RQVVKV  635 (705)
Q Consensus       606 ~~~~~l~~l~~~Cl~~dP~~RPs~-----~evl~~  635 (705)
                      .....+.+++..||+.||.+||++     .++++.
T Consensus       218 ~~~~~~~~li~~~l~~dP~~R~s~~~~~~~~ll~~  252 (318)
T cd05570         218 WLSKEAKSILKSFLTKNPEKRLGCLPTGEQDIKGH  252 (318)
T ss_pred             cCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHhcC
Confidence            334568899999999999999999     777653

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re

>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

Probab=100.00  E-value=3.6e-37  Score=318.88  Aligned_cols=253  Identities=28%  Similarity=0.466  Sum_probs=203.2

Q ss_pred             CCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCCchhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEEEEee
Q 005257          364 KGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDY  443 (705)
Q Consensus       364 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~lV~E~  443 (705)
                      ++|+..+.||+|+||.||+|.... +..+|+|.+..... ..+.+.+|+.++++++|+|++++++++.  ....+++|||
T Consensus         6 ~~~~~~~~ig~g~~~~v~~~~~~~-~~~~~~k~~~~~~~-~~~~~~~E~~~l~~l~~~~i~~~~~~~~--~~~~~lv~e~   81 (260)
T cd05070           6 ESLQLIKKLGNGQFGEVWMGTWNG-NTKVAVKTLKPGTM-SPESFLEEAQIMKKLRHDKLVQLYAVVS--EEPIYIVTEY   81 (260)
T ss_pred             HHhhhhheeccccCceEEEEEecC-CceeEEEEecCCCC-CHHHHHHHHHHHHhcCCCceEEEEeEEC--CCCcEEEEEe
Confidence            457788999999999999998764 56799999865433 3467999999999999999999999774  4567899999


Q ss_pred             CCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecCCCCc
Q 005257          444 MENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQV  523 (705)
Q Consensus       444 ~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~~~~~  523 (705)
                      +++++|.+++...... .+++.++..++.|++.||.|||+   .+++||||||+||++++++.++|+|||++........
T Consensus        82 ~~~~~L~~~~~~~~~~-~~~~~~~~~~~~~l~~al~~lH~---~~i~H~di~p~Nili~~~~~~~l~dfg~~~~~~~~~~  157 (260)
T cd05070          82 MSKGSLLDFLKDGEGR-ALKLPNLVDMAAQVAAGMAYIER---MNYIHRDLRSANILVGDGLVCKIADFGLARLIEDNEY  157 (260)
T ss_pred             cCCCcHHHHHHhcCCC-CCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCccceEEEeCCceEEeCCceeeeeccCccc
Confidence            9999999999764332 58999999999999999999998   9999999999999999999999999999987654332


Q ss_pred             ceeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhh-CCCCCCCCCccHHHHHHHHHHhCchhHHHHHhhhcCCC
Q 005257          524 ASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLS-GRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRAKGG  602 (705)
Q Consensus       524 ~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~Ellt-G~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~l~~~~~  602 (705)
                      .......++..|+|||.+.+..++.++||||||+++|||++ |+.||......  +. .+.+.         ....  ..
T Consensus       158 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~--~~-~~~~~---------~~~~--~~  223 (260)
T cd05070         158 TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNR--EV-LEQVE---------RGYR--MP  223 (260)
T ss_pred             ccccCCCCCccccChHHHhcCCCcchhhhHHHHHHHHHHHhcCCCCCCCCCHH--HH-HHHHH---------cCCC--CC
Confidence            22222345678999999988889999999999999999999 88898654321  11 11111         1111  12


Q ss_pred             CCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHh
Q 005257          603 FDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLEG  638 (705)
Q Consensus       603 ~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  638 (705)
                      .+......+.+++.+|++++|++|||+.++.+.|++
T Consensus       224 ~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~  259 (260)
T cd05070         224 CPQDCPISLHELMLQCWKKDPEERPTFEYLQSFLED  259 (260)
T ss_pred             CCCcCCHHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence            233445678999999999999999999999998874

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r

>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase

Probab=100.00  E-value=3.6e-37  Score=336.58  Aligned_cols=264  Identities=22%  Similarity=0.318  Sum_probs=197.8

Q ss_pred             CCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccC--CchhHHHHHHHHHHhccCCCCCcceeeeeeeecc----CceE
Q 005257          365 GFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHE--NDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREK----GSLM  438 (705)
Q Consensus       365 ~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~--~~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~----~~~~  438 (705)
                      +|+..+.||+|+||.||++.+..+++.||||++...  .....+.+.+|+++++.++||||+++++++....    ..++
T Consensus         1 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~   80 (372)
T cd07853           1 DVEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDPFEEIY   80 (372)
T ss_pred             CCcccceeeeCCCEEEEEEEECCCCCEEEEEeccccccchHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccccceEE
Confidence            477889999999999999999888999999998653  2234567899999999999999999999887532    2689


Q ss_pred             EEEeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceec
Q 005257          439 LVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMH  518 (705)
Q Consensus       439 lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~  518 (705)
                      +|+||+. ++|.+++...   ..+++..+..++.||+.||.|||+   .+++||||||+|||++.++.+||+|||+++..
T Consensus        81 lv~e~~~-~~l~~~~~~~---~~l~~~~~~~~~~qi~~aL~~LH~---~~ivH~dlkp~Nili~~~~~~kL~Dfg~a~~~  153 (372)
T cd07853          81 VVTELMQ-SDLHKIIVSP---QPLSSDHVKVFLYQILRGLKYLHS---AGILHRDIKPGNLLVNSNCVLKICDFGLARVE  153 (372)
T ss_pred             EEeeccc-cCHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHHh---CCeeCCCCChHHEEECCCCCEEeccccceeec
Confidence            9999996 5788877543   268999999999999999999998   99999999999999999999999999999876


Q ss_pred             CCCCcceeeeeeccccCCCccccccC-CCCccccEEEEehhHHHHhhCCCCCCCCCcc-HHHHHHHHHHhCchh------
Q 005257          519 GHGQVASTTRVVGTVGYLAPEVFSSG-RASTQTDVFGFGILILEVLSGRRPIEEGKPN-LVEMVWELMVQGKLL------  590 (705)
Q Consensus       519 ~~~~~~~~~~~~gt~~y~APE~~~~~-~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~-~~~~v~~~~~~~~~~------  590 (705)
                      ............+++.|+|||++.+. .++.++|||||||++|||++|+.||...... ..+.+.+........      
T Consensus       154 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~  233 (372)
T cd07853         154 EPDESKHMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLGTPSLEAMRSAC  233 (372)
T ss_pred             ccCccccCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHHhh
Confidence            54433333345678999999998764 4789999999999999999999999765431 111111111000000      


Q ss_pred             ----HHHHHhhhcCC------CCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 005257          591 ----DALDARLRAKG------GFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKV  635 (705)
Q Consensus       591 ----~~id~~l~~~~------~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  635 (705)
                          ..+........      .......+.+.+++..|++.||++|||+.|++++
T Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~h  288 (372)
T cd07853         234 EGARAHILRGPHKPPSLPVLYTLSSQATHEAVHLLCRMLVFDPDKRISAADALAH  288 (372)
T ss_pred             HHHHHHHHhCCCCCCchHHhcccCCCCCHHHHHHHHHhCCCChhhCcCHHHHhcC
Confidence                00000000000      0111123456778888888888888888887764

Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription

>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes

Probab=100.00  E-value=2.4e-37  Score=318.51  Aligned_cols=248  Identities=30%  Similarity=0.447  Sum_probs=198.9

Q ss_pred             eEEeecCceEEEEEEEcCCCeEEEEEEeccCC-chhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEEEEeeCCCCC
Q 005257          370 NVIGVGGNGKVYKGVLEGGGAEIAVKRISHEN-DGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGS  448 (705)
Q Consensus       370 ~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~-~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~lV~E~~~~gs  448 (705)
                      +.||+|+||.||+|++..+++.+|+|.+.... ......+.+|++++++++||||++++++|.. +...++||||+++++
T Consensus         1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~lv~e~~~~~~   79 (252)
T cd05084           1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQ-KQPIYIVMELVQGGD   79 (252)
T ss_pred             CccCcccCccEEEEEEecCCceEEEEecCccCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEcC-CCCeEEEEeeccCCc
Confidence            36999999999999998889999999876543 3345679999999999999999999999876 668899999999999


Q ss_pred             hhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecCCCCccee-e
Q 005257          449 LDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVAST-T  527 (705)
Q Consensus       449 L~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~~~~~~~~-~  527 (705)
                      |.+++....  ..+++.+++.++.|++.||.|||+   .+++||||||+||+++.++.+||+|||+++.......... .
T Consensus        80 L~~~~~~~~--~~~~~~~~~~~~~qi~~~L~~lH~---~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~  154 (252)
T cd05084          80 FLTFLRTEG--PRLKVKELIQMVENAAAGMEYLES---KHCIHRDLAARNCLVTEKNVLKISDFGMSREEEDGVYASTGG  154 (252)
T ss_pred             HHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHh---CCccccccchheEEEcCCCcEEECccccCcccccccccccCC
Confidence            999996543  258999999999999999999998   9999999999999999999999999999876443221111 1


Q ss_pred             eeeccccCCCccccccCCCCccccEEEEehhHHHHhh-CCCCCCCCCccHHHHHHHHHHhCchhHHHHHhhhcCCCCCHH
Q 005257          528 RVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLS-GRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRAKGGFDED  606 (705)
Q Consensus       528 ~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~Ellt-G~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~l~~~~~~~~~  606 (705)
                      ...++..|+|||.+.++.++.++|||||||++|||++ |..||......   ....         .+.....  ...+..
T Consensus       155 ~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~~---~~~~---------~~~~~~~--~~~~~~  220 (252)
T cd05084         155 MKQIPVKWTAPEALNYGRYSSESDVWSFGILLWEAFSLGAVPYANLSNQ---QTRE---------AIEQGVR--LPCPEL  220 (252)
T ss_pred             CCCCceeecCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccCHH---HHHH---------HHHcCCC--CCCccc
Confidence            1122456999999988889999999999999999998 88888653321   1111         1111111  122333


Q ss_pred             HHHHHHHHHHHcCCCCCCCCCCHHHHHHHHH
Q 005257          607 EVERVLHLGLLCAYPDPRARPTMRQVVKVLE  637 (705)
Q Consensus       607 ~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  637 (705)
                      ....+.+++.+|++.+|++||++.++.+.|+
T Consensus       221 ~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~  251 (252)
T cd05084         221 CPDAVYRLMERCWEYDPGQRPSFSTVHQELQ  251 (252)
T ss_pred             CCHHHHHHHHHHcCCChhhCcCHHHHHHHHh
Confidence            4567889999999999999999999999885

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular

>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=100.00  E-value=1e-37  Score=325.24  Aligned_cols=255  Identities=27%  Similarity=0.352  Sum_probs=204.7

Q ss_pred             HHhCCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCCc--------------hhHHHHHHHHHHhccCCCCCccee
Q 005257          361 AATKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHEND--------------GGTRAFLAEISSLGRLKHKSLVGL  426 (705)
Q Consensus       361 ~at~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~--------------~~~~~~~~Ei~~l~~l~Hpniv~l  426 (705)
                      ..-++|...+.||+|.||.|-+|+...+++.||||++.+...              ...+...+||.+|++++|||||+|
T Consensus        94 k~lNqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nVV~L  173 (576)
T KOG0585|consen   94 KQLNQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNVVKL  173 (576)
T ss_pred             eehhheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCeeEE
Confidence            345789999999999999999999999999999999865411              123578999999999999999999


Q ss_pred             eeeeee-ccCceEEEEeeCCCCChhHHHHhcCCCCc-ccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccC
Q 005257          427 RGWCKR-EKGSLMLVYDYMENGSLDKWIFQCDGSMM-LSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKE  504 (705)
Q Consensus       427 ~g~~~~-~~~~~~lV~E~~~~gsL~~~L~~~~~~~~-l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~  504 (705)
                      +.+..+ ..+.+|||+|||..|.+...    ..... ++..+.+++++++..||.|||.   ++||||||||+|+||+++
T Consensus       174 iEvLDDP~s~~~YlVley~s~G~v~w~----p~d~~els~~~Ar~ylrDvv~GLEYLH~---QgiiHRDIKPsNLLl~~~  246 (576)
T KOG0585|consen  174 IEVLDDPESDKLYLVLEYCSKGEVKWC----PPDKPELSEQQARKYLRDVVLGLEYLHY---QGIIHRDIKPSNLLLSSD  246 (576)
T ss_pred             EEeecCcccCceEEEEEeccCCccccC----CCCcccccHHHHHHHHHHHHHHHHHHHh---cCeeccccchhheEEcCC
Confidence            997753 24579999999998887542    22224 9999999999999999999999   999999999999999999


Q ss_pred             CCeeeeeeccceecCCCC----cceeeeeeccccCCCccccccCC----CCccccEEEEehhHHHHhhCCCCCCCCCccH
Q 005257          505 MNGRLGDFGLARMHGHGQ----VASTTRVVGTVGYLAPEVFSSGR----ASTQTDVFGFGILILEVLSGRRPIEEGKPNL  576 (705)
Q Consensus       505 ~~~kL~DFGla~~~~~~~----~~~~~~~~gt~~y~APE~~~~~~----~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~  576 (705)
                      |++||+|||.+.....+.    .......+|||.|||||...++.    .+.+.||||+||.||.|+.|+.||.+...  
T Consensus       247 g~VKIsDFGVs~~~~~~~~~~~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~~PF~~~~~--  324 (576)
T KOG0585|consen  247 GTVKISDFGVSNEFPQGSDEGSDDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTLYCLLFGQLPFFDDFE--  324 (576)
T ss_pred             CcEEeeccceeeecccCCccccHHHHhhcCCCccccchHhhcCCCCccccchhhhhhhhhhhHHHhhhccCCcccchH--
Confidence            999999999998763221    11223368999999999987743    36789999999999999999999986432  


Q ss_pred             HHHHHHHHHhCchhHHHHHhhhcCCCCC--HHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHH
Q 005257          577 VEMVWELMVQGKLLDALDARLRAKGGFD--EDEVERVLHLGLLCAYPDPRARPTMRQVVKVLE  637 (705)
Q Consensus       577 ~~~v~~~~~~~~~~~~id~~l~~~~~~~--~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  637 (705)
                                   ++..++.......++  ++..+.+.+|++.+|.+||+.|-+..+|..+..
T Consensus       325 -------------~~l~~KIvn~pL~fP~~pe~~e~~kDli~~lL~KdP~~Ri~l~~ik~Hpw  374 (576)
T KOG0585|consen  325 -------------LELFDKIVNDPLEFPENPEINEDLKDLIKRLLEKDPEQRITLPDIKLHPW  374 (576)
T ss_pred             -------------HHHHHHHhcCcccCCCcccccHHHHHHHHHHhhcChhheeehhhheecce
Confidence                         122222222222222  245678899999999999999999999988764

>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3

Probab=100.00  E-value=2.5e-37  Score=331.48  Aligned_cols=241  Identities=25%  Similarity=0.300  Sum_probs=192.3

Q ss_pred             eEEeecCceEEEEEEEcCCCeEEEEEEeccC---CchhHHHHHHHHH-HhccCCCCCcceeeeeeeeccCceEEEEeeCC
Q 005257          370 NVIGVGGNGKVYKGVLEGGGAEIAVKRISHE---NDGGTRAFLAEIS-SLGRLKHKSLVGLRGWCKREKGSLMLVYDYME  445 (705)
Q Consensus       370 ~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~---~~~~~~~~~~Ei~-~l~~l~Hpniv~l~g~~~~~~~~~~lV~E~~~  445 (705)
                      +.||+|+||+||+|....+++.+|+|++...   .....+.+..|.. +++.++||||+++++++.. ++..++||||++
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~-~~~~~lv~e~~~   79 (325)
T cd05604           1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQT-TEKLYFVLDFVN   79 (325)
T ss_pred             CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEec-CCEEEEEEcCCC
Confidence            4699999999999999989999999998654   2233455666665 4677999999999998876 678999999999


Q ss_pred             CCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecCCCCcce
Q 005257          446 NGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVAS  525 (705)
Q Consensus       446 ~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~~~~~~~  525 (705)
                      +|+|..++....   .+++.++..++.||+.||.|||+   .+|+||||||+|||++.++.+||+|||+++...... ..
T Consensus        80 ~~~L~~~l~~~~---~~~~~~~~~~~~qi~~al~~lH~---~givH~Dlkp~NIll~~~~~~kL~DfG~~~~~~~~~-~~  152 (325)
T cd05604          80 GGELFFHLQRER---SFPEPRARFYAAEIASALGYLHS---INIVYRDLKPENILLDSQGHVVLTDFGLCKEGIAQS-DT  152 (325)
T ss_pred             CCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHH---CCeeecCCCHHHeEECCCCCEEEeecCCcccCCCCC-CC
Confidence            999998886533   68999999999999999999998   999999999999999999999999999987532221 12


Q ss_pred             eeeeeccccCCCccccccCCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhHHHHHhhhcCCCCCH
Q 005257          526 TTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRAKGGFDE  605 (705)
Q Consensus       526 ~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~l~~~~~~~~  605 (705)
                      .....||+.|+|||++.+..++.++|||||||++|||++|+.||......  + ..+.+..+.            ....+
T Consensus       153 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~--~-~~~~~~~~~------------~~~~~  217 (325)
T cd05604         153 TTTFCGTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYCRDVA--E-MYDNILHKP------------LVLRP  217 (325)
T ss_pred             cccccCChhhCCHHHHcCCCCCCcCccccccceehhhhcCCCCCCCCCHH--H-HHHHHHcCC------------ccCCC
Confidence            23457999999999999989999999999999999999999999764421  1 111111111            11112


Q ss_pred             HHHHHHHHHHHHcCCCCCCCCCCHHHHH
Q 005257          606 DEVERVLHLGLLCAYPDPRARPTMRQVV  633 (705)
Q Consensus       606 ~~~~~l~~l~~~Cl~~dP~~RPs~~evl  633 (705)
                      .....+.+++..|++.+|.+||++++.+
T Consensus       218 ~~~~~~~~ll~~ll~~~p~~R~~~~~~~  245 (325)
T cd05604         218 GASLTAWSILEELLEKDRQRRLGAKEDF  245 (325)
T ss_pred             CCCHHHHHHHHHHhccCHHhcCCCCCCH
Confidence            2345677899999999999999886433

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,

>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1

Probab=100.00  E-value=2.7e-37  Score=337.23  Aligned_cols=262  Identities=21%  Similarity=0.245  Sum_probs=205.2

Q ss_pred             HHHHHHHhCCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccC---CchhHHHHHHHHHHhccCCCCCcceeeeeeee
Q 005257          356 YQEIEAATKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHE---NDGGTRAFLAEISSLGRLKHKSLVGLRGWCKR  432 (705)
Q Consensus       356 ~~el~~at~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~---~~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~  432 (705)
                      ..++....++|...+.||+|+||.||++.+..+++.+|+|++...   .....+.+.+|+.+++.++||||+++++.+..
T Consensus        35 ~~~~~~~~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~  114 (371)
T cd05622          35 IRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQD  114 (371)
T ss_pred             HhhcCcchhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEc
Confidence            445666678999999999999999999999999999999998642   22334567889999999999999999998875


Q ss_pred             ccCceEEEEeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeee
Q 005257          433 EKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDF  512 (705)
Q Consensus       433 ~~~~~~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DF  512 (705)
                       +..+++||||+++|+|.+++...    .++...+..++.||+.||.|||+   ++|+||||||+|||++.++.+||+||
T Consensus       115 -~~~~~lv~Ey~~gg~L~~~~~~~----~~~~~~~~~~~~qi~~aL~~LH~---~~ivHrDLkp~NIll~~~~~ikL~Df  186 (371)
T cd05622         115 -DRYLYMVMEYMPGGDLVNLMSNY----DVPEKWARFYTAEVVLALDAIHS---MGFIHRDVKPDNMLLDKSGHLKLADF  186 (371)
T ss_pred             -CCEEEEEEcCCCCCcHHHHHHhc----CCCHHHHHHHHHHHHHHHHHHHH---CCEEeCCCCHHHEEECCCCCEEEEeC
Confidence             67899999999999999998642    47888999999999999999998   99999999999999999999999999


Q ss_pred             ccceecCCCCcceeeeeeccccCCCccccccC----CCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCc
Q 005257          513 GLARMHGHGQVASTTRVVGTVGYLAPEVFSSG----RASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGK  588 (705)
Q Consensus       513 Gla~~~~~~~~~~~~~~~gt~~y~APE~~~~~----~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~  588 (705)
                      |+++.............+||+.|||||++...    .++.++|||||||++|||++|+.||.....  .... ..+....
T Consensus       187 G~a~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~--~~~~-~~i~~~~  263 (371)
T cd05622         187 GTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSL--VGTY-SKIMNHK  263 (371)
T ss_pred             CceeEcCcCCcccccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCCCCCH--HHHH-HHHHcCC
Confidence            99987654333333346799999999998653    378999999999999999999999976442  1111 1111110


Q ss_pred             hhHHHHHhhhcCCCCCHHHHHHHHHHHHHcCCCCCCC--CCCHHHHHHHH
Q 005257          589 LLDALDARLRAKGGFDEDEVERVLHLGLLCAYPDPRA--RPTMRQVVKVL  636 (705)
Q Consensus       589 ~~~~id~~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~--RPs~~evl~~L  636 (705)
                      .      .+.  ..........+.+++..|+..++.+  ||++.+++++.
T Consensus       264 ~------~~~--~~~~~~~s~~~~~li~~~L~~~~~r~~r~~~~ei~~h~  305 (371)
T cd05622         264 N------SLT--FPDDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRHL  305 (371)
T ss_pred             C------ccc--CCCcCCCCHHHHHHHHHHcCChhhhcCCCCHHHHhcCc
Confidence            0      000  0011123456778888899744433  77888888764

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an

>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1

Probab=100.00  E-value=3.3e-37  Score=338.01  Aligned_cols=202  Identities=24%  Similarity=0.364  Sum_probs=174.5

Q ss_pred             CCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCC---chhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEEEE
Q 005257          365 GFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHEN---DGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVY  441 (705)
Q Consensus       365 ~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~---~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~lV~  441 (705)
                      .|...++||+|+||+||+|....+++.||+|++....   ....+.+.+|++++++++||||+++++.+.. ++.+++||
T Consensus         2 ~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~-~~~~~lv~   80 (382)
T cd05625           2 MFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQD-KDNLYFVM   80 (382)
T ss_pred             CcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEe-CCEEEEEE
Confidence            5788999999999999999999999999999986532   2345678899999999999999999998876 67899999


Q ss_pred             eeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecCCC
Q 005257          442 DYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHG  521 (705)
Q Consensus       442 E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~~~  521 (705)
                      ||+++|+|.+++.+..   .+++..+..++.||+.||.|||+   ++|+||||||+|||++.++.+||+|||+++.+...
T Consensus        81 E~~~gg~L~~~l~~~~---~~~e~~~~~~~~qi~~al~~lH~---~~ivHrDlKp~NILl~~~g~~kL~DFGla~~~~~~  154 (382)
T cd05625          81 DYIPGGDMMSLLIRMG---IFPEDLARFYIAELTCAVESVHK---MGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWT  154 (382)
T ss_pred             eCCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEECCCCCEEEeECCCCcccccc
Confidence            9999999999997543   58899999999999999999998   99999999999999999999999999997532100


Q ss_pred             C----------------------------------------------cceeeeeeccccCCCccccccCCCCccccEEEE
Q 005257          522 Q----------------------------------------------VASTTRVVGTVGYLAPEVFSSGRASTQTDVFGF  555 (705)
Q Consensus       522 ~----------------------------------------------~~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~  555 (705)
                      .                                              .......+||+.|+|||++.+..++.++|||||
T Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSl  234 (382)
T cd05625         155 HDSKYYQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSV  234 (382)
T ss_pred             ccccccccccccccccccccccccccccccccccccchhhhhccccccccccccccCcccCCHHHhcCCCCCCeeeEEec
Confidence            0                                              000122479999999999998899999999999


Q ss_pred             ehhHHHHhhCCCCCCCCC
Q 005257          556 GILILEVLSGRRPIEEGK  573 (705)
Q Consensus       556 Gvvl~ElltG~~Pf~~~~  573 (705)
                      ||++|||++|+.||....
T Consensus       235 Gvil~elltG~~Pf~~~~  252 (382)
T cd05625         235 GVILYEMLVGQPPFLAQT  252 (382)
T ss_pred             hHHHHHHHhCCCCCCCCC
Confidence            999999999999998654

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an

>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=1.2e-37  Score=338.93  Aligned_cols=245  Identities=24%  Similarity=0.371  Sum_probs=209.6

Q ss_pred             HHhCCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccC---CchhHHHHHHHHHHhccC-CCCCcceeeeeeeeccCc
Q 005257          361 AATKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHE---NDGGTRAFLAEISSLGRL-KHKSLVGLRGWCKREKGS  436 (705)
Q Consensus       361 ~at~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~---~~~~~~~~~~Ei~~l~~l-~Hpniv~l~g~~~~~~~~  436 (705)
                      ..-++|...++||+|.||+|+++..+.+++.+|||.+++.   .+.+.+....|.+++... +||.++.++..+.. +.+
T Consensus       365 ~~l~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT-~~~  443 (694)
T KOG0694|consen  365 LTLDDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQT-KEH  443 (694)
T ss_pred             ccccceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeeccccccc-CCe
Confidence            3456789999999999999999999999999999999876   345567778888887777 59999999996665 889


Q ss_pred             eEEEEeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccce
Q 005257          437 LMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLAR  516 (705)
Q Consensus       437 ~~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~  516 (705)
                      +++||||+.||++..+.+    ...+++..+.-++..|+.||+|||+   ++||+||||-+|||||.+|.+||+||||++
T Consensus       444 l~fvmey~~Ggdm~~~~~----~~~F~e~rarfyaAev~l~L~fLH~---~~IIYRDlKLdNiLLD~eGh~kiADFGlcK  516 (694)
T KOG0694|consen  444 LFFVMEYVAGGDLMHHIH----TDVFSEPRARFYAAEVVLGLQFLHE---NGIIYRDLKLDNLLLDTEGHVKIADFGLCK  516 (694)
T ss_pred             EEEEEEecCCCcEEEEEe----cccccHHHHHHHHHHHHHHHHHHHh---cCceeeecchhheEEcccCcEEeccccccc
Confidence            999999999999544332    2369999999999999999999998   999999999999999999999999999998


Q ss_pred             ecCCCCcceeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhHHHHHh
Q 005257          517 MHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDAR  596 (705)
Q Consensus       517 ~~~~~~~~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~  596 (705)
                      ...... ..+.+++||+.|||||++.+..|+..+|.|||||+||||+.|..||.++++.               +..|..
T Consensus       517 e~m~~g-~~TsTfCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeML~Gq~PF~gddEe---------------e~FdsI  580 (694)
T KOG0694|consen  517 EGMGQG-DRTSTFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEMLVGESPFPGDDEE---------------EVFDSI  580 (694)
T ss_pred             ccCCCC-CccccccCChhhcChhhhccCcccchhhHHHHHHHHHHHHcCCCCCCCCCHH---------------HHHHHH
Confidence            654222 2456689999999999999999999999999999999999999999987652               344555


Q ss_pred             hhcCCCCCHHHHHHHHHHHHHcCCCCCCCCCCH
Q 005257          597 LRAKGGFDEDEVERVLHLGLLCAYPDPRARPTM  629 (705)
Q Consensus       597 l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~  629 (705)
                      +.....|+.....+...++...+..+|++|--+
T Consensus       581 ~~d~~~yP~~ls~ea~~il~~ll~k~p~kRLG~  613 (694)
T KOG0694|consen  581 VNDEVRYPRFLSKEAIAIMRRLLRKNPEKRLGS  613 (694)
T ss_pred             hcCCCCCCCcccHHHHHHHHHHhccCcccccCC
Confidence            555566677777888999999999999999765

>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src

Probab=100.00  E-value=4e-37  Score=319.25  Aligned_cols=255  Identities=26%  Similarity=0.438  Sum_probs=205.4

Q ss_pred             hCCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCCchhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEEEEe
Q 005257          363 TKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYD  442 (705)
Q Consensus       363 t~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~lV~E  442 (705)
                      .++|...++||+|+||.||+|.+.++ ..||+|+++... ...+.+.+|++++++++||||+++++.+.  ....++|||
T Consensus         5 ~~~~~~~~~lg~g~~~~v~~~~~~~~-~~valK~~~~~~-~~~~~~~~E~~~l~~l~~~~i~~~~~~~~--~~~~~lv~e   80 (262)
T cd05071           5 RESLRLEVKLGQGCFGEVWMGTWNGT-TRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVS--EEPIYIVTE   80 (262)
T ss_pred             hHHeeEeeecCCCCCCcEEEEEecCC-ceEEEEecccCc-cCHHHHHHHHHHHHhCCCCCcceEEEEEC--CCCcEEEEE
Confidence            34688899999999999999988765 469999987533 23467899999999999999999999764  456799999


Q ss_pred             eCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecCCCC
Q 005257          443 YMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQ  522 (705)
Q Consensus       443 ~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~~~~  522 (705)
                      |+++|+|.+++.+... ..+++..+..++.|++.||.|||+   .+++||||||+||++++++.+||+|||+++......
T Consensus        81 ~~~~~~L~~~~~~~~~-~~~~~~~~~~~~~~l~~aL~~lH~---~~i~H~dl~p~Nill~~~~~~~L~dfg~~~~~~~~~  156 (262)
T cd05071          81 YMSKGSLLDFLKGEMG-KYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNE  156 (262)
T ss_pred             cCCCCcHHHHHhhccc-cCCCHHHHHHHHHHHHHHHHHHHH---CCccccccCcccEEEcCCCcEEeccCCceeeccccc
Confidence            9999999999975432 258999999999999999999998   999999999999999999999999999998765443


Q ss_pred             cceeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhh-CCCCCCCCCccHHHHHHHHHHhCchhHHHHHhhhcCC
Q 005257          523 VASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLS-GRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRAKG  601 (705)
Q Consensus       523 ~~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~Ellt-G~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~l~~~~  601 (705)
                      ........++..|+|||+..+..++.++|||||||++|||++ |+.||......   ........+         ..  .
T Consensus       157 ~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~ellt~g~~p~~~~~~~---~~~~~~~~~---------~~--~  222 (262)
T cd05071         157 YTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNR---EVLDQVERG---------YR--M  222 (262)
T ss_pred             cccccCCcccceecCHhHhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCChH---HHHHHHhcC---------CC--C
Confidence            322223346778999999988889999999999999999999 88888654321   111111111         00  1


Q ss_pred             CCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHhc
Q 005257          602 GFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLEGK  639 (705)
Q Consensus       602 ~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~  639 (705)
                      ....+....+.+++..|++.+|++||++.++++.|+..
T Consensus       223 ~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~~~~~l~~~  260 (262)
T cd05071         223 PCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDY  260 (262)
T ss_pred             CCccccCHHHHHHHHHHccCCcccCCCHHHHHHHHHHh
Confidence            12334567789999999999999999999999999854

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo

>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=100.00  E-value=4.4e-37  Score=322.45  Aligned_cols=266  Identities=23%  Similarity=0.382  Sum_probs=204.5

Q ss_pred             CCCCcceEEeecCceEEEEEEE----cCCCeEEEEEEeccCCchhHHHHHHHHHHhccCCCCCcceeeeeeeec-cCceE
Q 005257          364 KGFSEENVIGVGGNGKVYKGVL----EGGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKRE-KGSLM  438 (705)
Q Consensus       364 ~~f~~~~~LG~G~fg~Vy~~~~----~~~~~~vavK~i~~~~~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~-~~~~~  438 (705)
                      ++|+..+.||+|+||.||++..    ..++..||+|++........+.+.+|++++++++||||+++++++... ...++
T Consensus         4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~   83 (284)
T cd05081           4 RHLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLR   83 (284)
T ss_pred             ccceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEccCCCCceE
Confidence            4677889999999999999985    346789999998776666677899999999999999999999987532 34689


Q ss_pred             EEEeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceec
Q 005257          439 LVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMH  518 (705)
Q Consensus       439 lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~  518 (705)
                      +|+||+++++|.+++.+...  .+++..+..++.|++.||.|||+   .+++||||||+||++++++.+||+|||+++..
T Consensus        84 lv~e~~~~~~L~~~l~~~~~--~l~~~~~~~~~~~l~~aL~~LH~---~~i~H~dlkp~nili~~~~~~~l~dfg~~~~~  158 (284)
T cd05081          84 LVMEYLPYGSLRDYLQKHRE--RLDHRKLLLYASQICKGMEYLGS---KRYVHRDLATRNILVESENRVKIGDFGLTKVL  158 (284)
T ss_pred             EEEEecCCCCHHHHHHhcCc--CCCHHHHHHHHHHHHHHHHHHHH---CCceeccCCHhhEEECCCCeEEECCCcccccc
Confidence            99999999999999965432  58999999999999999999998   99999999999999999999999999999876


Q ss_pred             CCCCccee--eeeeccccCCCccccccCCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCc----hhHH
Q 005257          519 GHGQVAST--TRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGK----LLDA  592 (705)
Q Consensus       519 ~~~~~~~~--~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~----~~~~  592 (705)
                      ........  ....++..|+|||++.+..++.++|||||||++|||++|..|+.......    ...+....    ....
T Consensus       159 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~  234 (284)
T cd05081         159 PQDKEYYKVREPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYSDKSCSPPAEF----MRMMGNDKQGQMIVYH  234 (284)
T ss_pred             cCCCcceeecCCCCCceEeeCHHHhccCCcChHHHHHHHHHHHHHHhhcCCcCCCcchhh----hhhcccccccccchHH
Confidence            44322111  11123456999999988889999999999999999999887764322111    11111110    0000


Q ss_pred             HHHhhhcC--CCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHh
Q 005257          593 LDARLRAK--GGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLEG  638 (705)
Q Consensus       593 id~~l~~~--~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  638 (705)
                      +...+...  ..........+.+++.+||+.+|++|||+.++++.|+.
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~  282 (284)
T cd05081         235 LIELLKNNGRLPAPPGCPAEIYAIMKECWNNDPSQRPSFSELALQVEA  282 (284)
T ss_pred             HHHHHhcCCcCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHh
Confidence            10111100  11122344678999999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th

>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=4e-37  Score=336.81  Aligned_cols=253  Identities=21%  Similarity=0.282  Sum_probs=197.7

Q ss_pred             CCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccC---CchhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEEE
Q 005257          364 KGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHE---NDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLV  440 (705)
Q Consensus       364 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~---~~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~lV  440 (705)
                      ++|...+.||+|+||.||++....+++.||||++...   .....+.+.+|++++.+++||||+++++++.. ...+++|
T Consensus         1 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~-~~~~~lv   79 (377)
T cd05629           1 EDFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQD-AQYLYLI   79 (377)
T ss_pred             CCceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEEEc-CCeeEEE
Confidence            4688899999999999999999999999999998643   22345678899999999999999999998876 6789999


Q ss_pred             EeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecCC
Q 005257          441 YDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGH  520 (705)
Q Consensus       441 ~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~~  520 (705)
                      |||+++|+|.+++....   .+++..+..++.|++.||.|||+   .+|+||||||+|||++.++.+||+|||+++.+..
T Consensus        80 ~E~~~gg~L~~~l~~~~---~~~~~~~~~~~~ql~~aL~~LH~---~givHrDlkp~NIll~~~~~~kl~DfGla~~~~~  153 (377)
T cd05629          80 MEFLPGGDLMTMLIKYD---TFSEDVTRFYMAECVLAIEAVHK---LGFIHRDIKPDNILIDRGGHIKLSDFGLSTGFHK  153 (377)
T ss_pred             EeCCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHh---CCeeccCCCHHHEEECCCCCEEEeeccccccccc
Confidence            99999999999997543   68899999999999999999998   9999999999999999999999999999964321


Q ss_pred             CCcc----------------------------------------------eeeeeeccccCCCccccccCCCCccccEEE
Q 005257          521 GQVA----------------------------------------------STTRVVGTVGYLAPEVFSSGRASTQTDVFG  554 (705)
Q Consensus       521 ~~~~----------------------------------------------~~~~~~gt~~y~APE~~~~~~~s~ksDVwS  554 (705)
                      ....                                              .....+||+.|+|||++.+..++.++||||
T Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwS  233 (377)
T cd05629         154 QHDSAYYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQGYGQECDWWS  233 (377)
T ss_pred             ccccccccccccccccccccccccccccccccccccchhhhhhhhhcccccccccCCCccccCHHHHccCCCCCceeeEe
Confidence            1000                                              001246999999999999889999999999


Q ss_pred             EehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhHHHHHhhhcCCCCCHHHHHHHHHHHHHcCCCCCCCC---CCHHH
Q 005257          555 FGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRAKGGFDEDEVERVLHLGLLCAYPDPRAR---PTMRQ  631 (705)
Q Consensus       555 ~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~R---Ps~~e  631 (705)
                      |||++|||++|+.||......  +. ...+....      ..+....  .......+.+++..|+. +|.+|   |++.+
T Consensus       234 lGvil~elltG~~Pf~~~~~~--~~-~~~i~~~~------~~~~~p~--~~~~s~~~~dli~~lL~-~~~~r~~r~~~~~  301 (377)
T cd05629         234 LGAIMFECLIGWPPFCSENSH--ET-YRKIINWR------ETLYFPD--DIHLSVEAEDLIRRLIT-NAENRLGRGGAHE  301 (377)
T ss_pred             cchhhhhhhcCCCCCCCCCHH--HH-HHHHHccC------CccCCCC--CCCCCHHHHHHHHHHhc-CHhhcCCCCCHHH
Confidence            999999999999999764431  11 11111100      0010000  01123456778888887 66665   59988


Q ss_pred             HHHH
Q 005257          632 VVKV  635 (705)
Q Consensus       632 vl~~  635 (705)
                      ++++
T Consensus       302 ~l~h  305 (377)
T cd05629         302 IKSH  305 (377)
T ss_pred             HhcC
Confidence            8875

Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of

>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

Probab=100.00  E-value=1.4e-36  Score=314.91  Aligned_cols=259  Identities=24%  Similarity=0.382  Sum_probs=211.7

Q ss_pred             CCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccC---CchhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEEE
Q 005257          364 KGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHE---NDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLV  440 (705)
Q Consensus       364 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~---~~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~lV  440 (705)
                      ++|+..+.||+|+||.||+|....+++.||+|.++..   .....+.+.+|++++++++|+|++++++.+.. .+..++|
T Consensus         2 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~-~~~~~lv   80 (267)
T cd08224           2 GNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFIE-NNELNIV   80 (267)
T ss_pred             CceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeeeec-CCeEEEE
Confidence            5788899999999999999999988999999988643   22345678999999999999999999998876 6788999


Q ss_pred             EeeCCCCChhHHHHhcC-CCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecC
Q 005257          441 YDYMENGSLDKWIFQCD-GSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHG  519 (705)
Q Consensus       441 ~E~~~~gsL~~~L~~~~-~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~  519 (705)
                      |||+++++|.+++.... ....+++.++..++.|++.||.|||+   .+++|+||||+||+++.++.++|+|||+++...
T Consensus        81 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~---~~i~h~dl~p~nil~~~~~~~~l~d~~~~~~~~  157 (267)
T cd08224          81 LELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHS---KRIMHRDIKPANVFITATGVVKLGDLGLGRFFS  157 (267)
T ss_pred             EecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHh---CCEecCCcChhhEEECCCCcEEEeccceeeecc
Confidence            99999999999987532 23368999999999999999999998   999999999999999999999999999998654


Q ss_pred             CCCcceeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhHHHHHhhhc
Q 005257          520 HGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRA  599 (705)
Q Consensus       520 ~~~~~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~l~~  599 (705)
                      ..... .....|+..|+|||.+.+..++.++|||||||++|||++|+.||........+.. +....+..          
T Consensus       158 ~~~~~-~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~-~~~~~~~~----------  225 (267)
T cd08224         158 SKTTA-AHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLC-KKIEKCDY----------  225 (267)
T ss_pred             CCCcc-cceecCCccccCHHHhccCCCCchhcHHHHHHHHHHHHHCCCCcccCCccHHHHH-hhhhcCCC----------
Confidence            33221 2235688999999999888899999999999999999999999976543322211 11111111          


Q ss_pred             CCCCCH-HHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHhc
Q 005257          600 KGGFDE-DEVERVLHLGLLCAYPDPRARPTMRQVVKVLEGK  639 (705)
Q Consensus       600 ~~~~~~-~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~  639 (705)
                       ...+. .....+.+++.+||+.+|++||++.++++.|+++
T Consensus       226 -~~~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~il~~~~~~  265 (267)
T cd08224         226 -PPLPADHYSEELRDLVSRCINPDPEKRPDISYVLQVAKEM  265 (267)
T ss_pred             -CCCChhhcCHHHHHHHHHHcCCCcccCCCHHHHHHHHHHh
Confidence             11112 3456788999999999999999999999999854

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a

>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

Probab=100.00  E-value=5.9e-37  Score=318.16  Aligned_cols=260  Identities=23%  Similarity=0.376  Sum_probs=209.2

Q ss_pred             CCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCC---chhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEEE
Q 005257          364 KGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHEN---DGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLV  440 (705)
Q Consensus       364 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~---~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~lV  440 (705)
                      .+|+..+.||+|++|.||++....++..+|||.+....   .....++.+|+.+++.++||||+++++++.. ++..+++
T Consensus         2 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-~~~~~~v   80 (267)
T cd08229           2 ANFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIE-DNELNIV   80 (267)
T ss_pred             chhhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhheeEe-CCeEEEE
Confidence            35777889999999999999998889999999886532   2344678999999999999999999998876 6688999


Q ss_pred             EeeCCCCChhHHHHhcC-CCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecC
Q 005257          441 YDYMENGSLDKWIFQCD-GSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHG  519 (705)
Q Consensus       441 ~E~~~~gsL~~~L~~~~-~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~  519 (705)
                      |||+++++|.+++.... ....+++..++.++.|++.||.|||+   .+++|+||||+||+++.++.++|+|||++....
T Consensus        81 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~---~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~  157 (267)
T cd08229          81 LELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHS---RRVMHRDIKPANVFITATGVVKLGDLGLGRFFS  157 (267)
T ss_pred             EEecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEEcCCCCEEECcchhhhccc
Confidence            99999999999987532 23368999999999999999999998   999999999999999999999999999987664


Q ss_pred             CCCcceeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhHHHHHhhhc
Q 005257          520 HGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRA  599 (705)
Q Consensus       520 ~~~~~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~l~~  599 (705)
                      ..... .....|+..|+|||++.+..++.++||||||+++|||++|..||........... .......        .. 
T Consensus       158 ~~~~~-~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~-~~~~~~~--------~~-  226 (267)
T cd08229         158 SKTTA-AHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLC-KKIEQCD--------YP-  226 (267)
T ss_pred             cCCcc-cccccCCcCccCHHHhcCCCccchhhHHHHHHHHHHHHhCCCCcccccchHHHHh-hhhhcCC--------CC-
Confidence            33221 2234688999999999888899999999999999999999999975443211111 1111000        00 


Q ss_pred             CCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHhc
Q 005257          600 KGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLEGK  639 (705)
Q Consensus       600 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~  639 (705)
                       ..........+.+++.+||+.+|++|||+.+|++.+.++
T Consensus       227 -~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~i~~~~~~~  265 (267)
T cd08229         227 -PLPSDHYSEELRQLVNMCINPDPEKRPDITYVYDVAKRM  265 (267)
T ss_pred             -CCCcccccHHHHHHHHHhcCCCcccCCCHHHHHHHHhhh
Confidence             111123456788999999999999999999999998754

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.

>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

Probab=100.00  E-value=3.6e-37  Score=323.07  Aligned_cols=256  Identities=23%  Similarity=0.407  Sum_probs=203.2

Q ss_pred             CCCCcceEEeecCceEEEEEEEc----CCCeEEEEEEeccCC-chhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceE
Q 005257          364 KGFSEENVIGVGGNGKVYKGVLE----GGGAEIAVKRISHEN-DGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLM  438 (705)
Q Consensus       364 ~~f~~~~~LG~G~fg~Vy~~~~~----~~~~~vavK~i~~~~-~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~  438 (705)
                      ++|+..+.||+|+||.||+|...    ..+..||+|.+.... ......+.+|+.++++++||||+++++++.. +...+
T Consensus         5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~-~~~~~   83 (283)
T cd05090           5 SAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAELHHPNIVCLLGVVTQ-EQPVC   83 (283)
T ss_pred             hhceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCCeeeEEEEEec-CCceE
Confidence            35677899999999999999863    345789999987543 3344678999999999999999999998876 66889


Q ss_pred             EEEeeCCCCChhHHHHhcCC--------------CCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccC
Q 005257          439 LVYDYMENGSLDKWIFQCDG--------------SMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKE  504 (705)
Q Consensus       439 lV~E~~~~gsL~~~L~~~~~--------------~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~  504 (705)
                      +||||+++++|.+++.....              ...+++.+++.++.|++.||.|||+   ++++||||||+|||++++
T Consensus        84 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~---~~i~H~dlkp~nili~~~  160 (283)
T cd05090          84 MLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSS---HFFVHKDLAARNILIGEQ  160 (283)
T ss_pred             EEEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHh---cCeehhccccceEEEcCC
Confidence            99999999999999864321              2258899999999999999999998   999999999999999999


Q ss_pred             CCeeeeeeccceecCCCCc-ceeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhh-CCCCCCCCCccHHHHHHH
Q 005257          505 MNGRLGDFGLARMHGHGQV-ASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLS-GRRPIEEGKPNLVEMVWE  582 (705)
Q Consensus       505 ~~~kL~DFGla~~~~~~~~-~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~Ellt-G~~Pf~~~~~~~~~~v~~  582 (705)
                      +.+||+|||+++....... .......++..|+|||++.+..++.++|||||||++|||++ |..||.....   ..+.+
T Consensus       161 ~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~g~~p~~~~~~---~~~~~  237 (283)
T cd05090         161 LHVKISDLGLSREIYSADYYRVQPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQPYYGFSN---QEVIE  237 (283)
T ss_pred             CcEEeccccccccccCCcceecccCCCccceecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCH---HHHHH
Confidence            9999999999976543321 11222345678999999988889999999999999999998 9889865432   11122


Q ss_pred             HHHhCchhHHHHHhhhcCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHH
Q 005257          583 LMVQGKLLDALDARLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLE  637 (705)
Q Consensus       583 ~~~~~~~~~~id~~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  637 (705)
                      ....+..           ...+......+.+++.+||++||++||++.++.+.|.
T Consensus       238 ~~~~~~~-----------~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~  281 (283)
T cd05090         238 MVRKRQL-----------LPCSEDCPPRMYSLMTECWQEGPSRRPRFKDIHTRLR  281 (283)
T ss_pred             HHHcCCc-----------CCCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHhh
Confidence            2222111           1122233467888999999999999999999999886

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]

Probab=100.00  E-value=3.3e-38  Score=336.32  Aligned_cols=258  Identities=26%  Similarity=0.404  Sum_probs=216.8

Q ss_pred             hCCCCcceEEeecCceEEEEEEEcC----CCeEEEEEEeccC-CchhHHHHHHHHHHhccCCCCCcceeeeeeeeccCce
Q 005257          363 TKGFSEENVIGVGGNGKVYKGVLEG----GGAEIAVKRISHE-NDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSL  437 (705)
Q Consensus       363 t~~f~~~~~LG~G~fg~Vy~~~~~~----~~~~vavK~i~~~-~~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~  437 (705)
                      .+.....++||.|-||.||+|++..    ....||||..+.. .....+.|+.|..+|+.++||||++++|+|.+  ...
T Consensus       388 Re~Itl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~d~tekflqEa~iMrnfdHphIikLIGv~~e--~P~  465 (974)
T KOG4257|consen  388 RELITLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCTPDDTEKFLQEASIMRNFDHPHIIKLIGVCVE--QPM  465 (974)
T ss_pred             hhhccHHHhhcCCcccceeeeEecccccCcceeeeeehhccCCChhhHHHHHHHHHHHHhCCCcchhheeeeeec--cce
Confidence            3344556789999999999999743    2356999988775 34557889999999999999999999999974  578


Q ss_pred             EEEEeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeecccee
Q 005257          438 MLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARM  517 (705)
Q Consensus       438 ~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~  517 (705)
                      +||||.++-|.|..||..++.  .|+......++.||+.||+|||+   ..+|||||.++|||+.+...+||+||||+|.
T Consensus       466 WivmEL~~~GELr~yLq~nk~--sL~l~tL~ly~~Qi~talaYLeS---krfVHRDIAaRNiLVsSp~CVKLaDFGLSR~  540 (974)
T KOG4257|consen  466 WIVMELAPLGELREYLQQNKD--SLPLRTLTLYCYQICTALAYLES---KRFVHRDIAARNILVSSPQCVKLADFGLSRY  540 (974)
T ss_pred             eEEEecccchhHHHHHHhccc--cchHHHHHHHHHHHHHHHHHHHh---hchhhhhhhhhheeecCcceeeecccchhhh
Confidence            999999999999999987665  58999999999999999999999   9999999999999999999999999999999


Q ss_pred             cCCCCcceeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhh-CCCCCCCCCccHHHHHHHHHHhCchhHHHHHh
Q 005257          518 HGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLS-GRRPIEEGKPNLVEMVWELMVQGKLLDALDAR  596 (705)
Q Consensus       518 ~~~~~~~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~Ellt-G~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~  596 (705)
                      .............-+..|||||.+.-..++.++|||-|||++||++. |..||.+-...   .|...+.+|+       |
T Consensus       541 ~ed~~yYkaS~~kLPIKWmaPESINfRrFTtASDVWMFgVCmWEIl~lGvkPfqgvkNs---DVI~~iEnGe-------R  610 (974)
T KOG4257|consen  541 LEDDAYYKASRGKLPIKWMAPESINFRRFTTASDVWMFGVCMWEILSLGVKPFQGVKNS---DVIGHIENGE-------R  610 (974)
T ss_pred             ccccchhhccccccceeecCccccchhcccchhhHHHHHHHHHHHHHhcCCcccccccc---ceEEEecCCC-------C
Confidence            88766555444444778999999999999999999999999999987 99999864321   0111122221       1


Q ss_pred             hhcCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHhccc
Q 005257          597 LRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLEGKIE  641 (705)
Q Consensus       597 l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~  641 (705)
                          ...++.|+..+..|+.+||..+|.+||.+.|+...|....+
T Consensus       611 ----lP~P~nCPp~LYslmskcWayeP~kRPrftei~~~lsdv~q  651 (974)
T KOG4257|consen  611 ----LPCPPNCPPALYSLMSKCWAYEPSKRPRFTEIKAILSDVLQ  651 (974)
T ss_pred             ----CCCCCCCChHHHHHHHHHhccCcccCCcHHHHHHHHHHHHH
Confidence                34567788899999999999999999999999999987765

>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]

Probab=100.00  E-value=8.6e-38  Score=350.32  Aligned_cols=259  Identities=25%  Similarity=0.324  Sum_probs=211.2

Q ss_pred             CCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCCchhHHHHHHHHHHhccCC-CCCcceeeee-eeec-----cCc
Q 005257          364 KGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLK-HKSLVGLRGW-CKRE-----KGS  436 (705)
Q Consensus       364 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~~~~~~~~~Ei~~l~~l~-Hpniv~l~g~-~~~~-----~~~  436 (705)
                      .++++.+.|.+|||+.||.+.+...+..+|+|++-..++...+...+||++|+.|+ |||||.+++. ....     .-+
T Consensus        37 ~~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~~~~~E  116 (738)
T KOG1989|consen   37 HRVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVNDEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSNNGVWE  116 (738)
T ss_pred             EEEEEEEEEccCCcEEEEEEEecCCCceeeeeeeecCCHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccCCCceeE
Confidence            34567889999999999999999887999999998888888999999999999997 9999999993 2211     236


Q ss_pred             eEEEEeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccce
Q 005257          437 LMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLAR  516 (705)
Q Consensus       437 ~~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~  516 (705)
                      ++|.||||.+|+|-+++..+-.. .|++.++++|+.|+++|+++||. ++.+|||||||-+||||..+++.||||||.|.
T Consensus       117 vllLmEyC~gg~Lvd~mn~Rlq~-~lte~eVLkIf~dv~~AVa~mH~-~~pPiIHRDLKiENvLls~~g~~KLCDFGSat  194 (738)
T KOG1989|consen  117 VLLLMEYCKGGSLVDFMNTRLQT-RLTEDEVLKIFYDVCEAVAAMHY-LKPPIIHRDLKIENVLLSADGNYKLCDFGSAT  194 (738)
T ss_pred             EEeehhhccCCcHHHHHHHHHhc-cCChHHHHHHHHHHHHHHHHHhc-CCCccchhhhhhhheEEcCCCCEEeCcccccc
Confidence            78999999999999999875544 59999999999999999999997 56789999999999999999999999999986


Q ss_pred             ecCCCCc-ce-------eeeeeccccCCCcccc---ccCCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHH
Q 005257          517 MHGHGQV-AS-------TTRVVGTVGYLAPEVF---SSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMV  585 (705)
Q Consensus       517 ~~~~~~~-~~-------~~~~~gt~~y~APE~~---~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~  585 (705)
                      ..-.... ..       .....-|+-|+|||++   .+...++|+|||+|||+||-||....||+.....          
T Consensus       195 t~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLYkLCy~t~PFe~sg~l----------  264 (738)
T KOG1989|consen  195 TKILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLCYFTTPFEESGKL----------  264 (738)
T ss_pred             cccCCCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHHHHHHHhCCCcCcCcce----------
Confidence            4332211 00       0012348899999997   4678999999999999999999999999875321          


Q ss_pred             hCchhHHHHHhhhcCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHhccc
Q 005257          586 QGKLLDALDARLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLEGKIE  641 (705)
Q Consensus       586 ~~~~~~~id~~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~  641 (705)
                           ..+.....  -...+.+...+..|+..||++||++||++.|++..+-.+..
T Consensus       265 -----aIlng~Y~--~P~~p~ys~~l~~LI~~mL~~nP~~RPnI~Qv~~~~~~l~~  313 (738)
T KOG1989|consen  265 -----AILNGNYS--FPPFPNYSDRLKDLIRTMLQPNPDERPNIYQVLEEIFELAN  313 (738)
T ss_pred             -----eEEecccc--CCCCccHHHHHHHHHHHHhccCcccCCCHHHHHHHHHHHhc
Confidence                 11111211  11124678899999999999999999999999998876654

>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

Probab=100.00  E-value=4.7e-37  Score=317.64  Aligned_cols=251  Identities=28%  Similarity=0.429  Sum_probs=201.6

Q ss_pred             CCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCCchhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEEEEeeC
Q 005257          365 GFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYM  444 (705)
Q Consensus       365 ~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~lV~E~~  444 (705)
                      +|...+.||+|+||.||+|...+ +..+|+|.+.... ....++.+|+.++.+++||||++++++|.. ....++||||+
T Consensus         5 ~~~~~~~lg~G~~~~vy~~~~~~-~~~~aik~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~lv~e~~   81 (256)
T cd05113           5 DLTFLKELGTGQFGVVKYGKWRG-QYDVAIKMIKEGS-MSEDEFIEEAKVMMKLSHEKLVQLYGVCTK-QRPIYIVTEYM   81 (256)
T ss_pred             HeEEeeEecCcccceEEEEEecC-CCcEEEEEcCCCc-ccHHHHHHHHHHHhcCCCCCeeeEEEEEcc-CCCcEEEEEcC
Confidence            46778899999999999998764 4569999886432 334679999999999999999999998875 56789999999


Q ss_pred             CCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecCCCCcc
Q 005257          445 ENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVA  524 (705)
Q Consensus       445 ~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~~~~~~  524 (705)
                      ++|+|.+++.....  .+++.+++.++.|++.||.|||+   .+++|+||||+||+++.++.+||+|||+++........
T Consensus        82 ~~~~l~~~i~~~~~--~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dl~p~nili~~~~~~kl~d~g~~~~~~~~~~~  156 (256)
T cd05113          82 SNGCLLNYLREHGK--RFQPSQLLEMCKDVCEGMAYLES---KQFIHRDLAARNCLVDDQGCVKVSDFGLSRYVLDDEYT  156 (256)
T ss_pred             CCCcHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHh---CCeeccccCcceEEEcCCCCEEECCCccceecCCCcee
Confidence            99999999976433  58999999999999999999998   99999999999999999999999999999866443322


Q ss_pred             eeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhh-CCCCCCCCCccHHHHHHHHHHhCchhHHHHHhhhcCCCC
Q 005257          525 STTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLS-GRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRAKGGF  603 (705)
Q Consensus       525 ~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~Ellt-G~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~l~~~~~~  603 (705)
                      ......++..|+|||.+.+..++.++|||||||++|||++ |+.||......   .+......+..           ...
T Consensus       157 ~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~---~~~~~~~~~~~-----------~~~  222 (256)
T cd05113         157 SSVGSKFPVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMPYERFNNS---ETVEKVSQGLR-----------LYR  222 (256)
T ss_pred             ecCCCccChhhCCHHHHhcCcccchhHHHHHHHHHHHHhcCCCCCcCcCCHH---HHHHHHhcCCC-----------CCC
Confidence            2222345678999999988889999999999999999998 99998754321   11112222111           111


Q ss_pred             CHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHH
Q 005257          604 DEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLE  637 (705)
Q Consensus       604 ~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  637 (705)
                      +......+.+++..||+.+|.+||++.++++.|+
T Consensus       223 ~~~~~~~~~~li~~cl~~~p~~Rp~~~~ll~~~~  256 (256)
T cd05113         223 PHLASEKVYAIMYSCWHEKAEERPTFQQLLSSIE  256 (256)
T ss_pred             CCCCCHHHHHHHHHHcCCCcccCCCHHHHHHhhC
Confidence            1223467899999999999999999999998764

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds

>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

Probab=100.00  E-value=8.2e-37  Score=317.64  Aligned_cols=261  Identities=25%  Similarity=0.370  Sum_probs=207.8

Q ss_pred             HHHHHhCCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCCchhHHHHHHHHHHhccCCCCCcceeeeeeeeccCce
Q 005257          358 EIEAATKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSL  437 (705)
Q Consensus       358 el~~at~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~  437 (705)
                      |++.+++++.....||+|+||.||+|.+..++..||+|.+........+.+.+|++++++++|+||+++++++.. ++..
T Consensus         2 ~~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~   80 (268)
T cd06624           2 EYEYEYDENGERVVLGKGTYGIVYAARDLSTQVRIAIKEIPERDSRYVQPLHEEIALHSYLKHRNIVQYLGSDSE-NGFF   80 (268)
T ss_pred             CcccccccCCceEEEecCCceEEEEeEecCCCcEEEEEEecCCCHHHHHHHHHHHHHHHhcCCCCeeeeeeeecc-CCEE
Confidence            345667788888899999999999999988899999999877766677889999999999999999999998876 6788


Q ss_pred             EEEEeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEcc-CCCeeeeeeccce
Q 005257          438 MLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDK-EMNGRLGDFGLAR  516 (705)
Q Consensus       438 ~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~-~~~~kL~DFGla~  516 (705)
                      ++|+||+++++|.+++.........++..+..++.|++.||.|||+   .+|+||||||+||+++. ++.+||+|||++.
T Consensus        81 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~al~~lH~---~~i~h~dl~p~nil~~~~~~~~~l~dfg~~~  157 (268)
T cd06624          81 KIFMEQVPGGSLSALLRSKWGPLKDNEQTIIFYTKQILEGLKYLHD---NQIVHRDIKGDNVLVNTYSGVVKISDFGTSK  157 (268)
T ss_pred             EEEEecCCCCCHHHHHHHhcccCCCcHHHHHHHHHHHHHHHHHHHH---CCEeecCCCHHHEEEcCCCCeEEEecchhhe
Confidence            9999999999999999764322122788899999999999999998   99999999999999986 6789999999997


Q ss_pred             ecCCCCcceeeeeeccccCCCccccccCC--CCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhHHHH
Q 005257          517 MHGHGQVASTTRVVGTVGYLAPEVFSSGR--ASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALD  594 (705)
Q Consensus       517 ~~~~~~~~~~~~~~gt~~y~APE~~~~~~--~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~~id  594 (705)
                      ....... ......|++.|+|||++....  ++.++||||||+++|||++|+.||........ ..+...          
T Consensus       158 ~~~~~~~-~~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~~~~-~~~~~~----------  225 (268)
T cd06624         158 RLAGINP-CTETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELGEPQA-AMFKVG----------  225 (268)
T ss_pred             ecccCCC-ccccCCCCccccChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCccccChhh-hHhhhh----------
Confidence            6543222 122345789999999986643  78999999999999999999999975332111 000000          


Q ss_pred             HhhhcCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 005257          595 ARLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKV  635 (705)
Q Consensus       595 ~~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  635 (705)
                       ........+....+.+..++.+||+.+|++||++.+++..
T Consensus       226 -~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~  265 (268)
T cd06624         226 -MFKIHPEIPESLSAEAKNFILRCFEPDPDKRASAHDLLQD  265 (268)
T ss_pred             -hhccCCCCCcccCHHHHHHHHHHcCCCchhCCCHHHHHhC
Confidence             0001122333445678899999999999999999998863

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina

>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase)

Probab=100.00  E-value=3.6e-37  Score=322.39  Aligned_cols=263  Identities=24%  Similarity=0.391  Sum_probs=210.8

Q ss_pred             HhCCCCcceEEeecCceEEEEEEEcC----CCeEEEEEEeccCC-chhHHHHHHHHHHhccCCCCCcceeeeeeeeccCc
Q 005257          362 ATKGFSEENVIGVGGNGKVYKGVLEG----GGAEIAVKRISHEN-DGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGS  436 (705)
Q Consensus       362 at~~f~~~~~LG~G~fg~Vy~~~~~~----~~~~vavK~i~~~~-~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~  436 (705)
                      ..++|...+.||+|+||.||+|.+..    .+..|++|++.... ....+.+.+|+.++++++||||+++++++......
T Consensus         4 ~~~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~   83 (280)
T cd05043           4 SRDRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQVTLLLQESCLLYGLSHQNILPILHVCIEDGEP   83 (280)
T ss_pred             chhheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCC
Confidence            34678889999999999999999875    35789999886543 34456789999999999999999999998876678


Q ss_pred             eEEEEeeCCCCChhHHHHhcCCC-----CcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeee
Q 005257          437 LMLVYDYMENGSLDKWIFQCDGS-----MMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGD  511 (705)
Q Consensus       437 ~~lV~E~~~~gsL~~~L~~~~~~-----~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~D  511 (705)
                      .++++||+++++|.+++......     ..+++.+++.++.|++.||.|||+   .+++||||||+||++++++.+||+|
T Consensus        84 ~~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~---~~i~H~di~p~nil~~~~~~~kl~d  160 (280)
T cd05043          84 PFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHK---RGVIHKDIAARNCVIDEELQVKITD  160 (280)
T ss_pred             CEEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHH---CCEeecccCHhhEEEcCCCcEEECC
Confidence            89999999999999999764322     368999999999999999999998   9999999999999999999999999


Q ss_pred             eccceecCCCCcce-eeeeeccccCCCccccccCCCCccccEEEEehhHHHHhh-CCCCCCCCCccHHHHHHHHHHhCch
Q 005257          512 FGLARMHGHGQVAS-TTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLS-GRRPIEEGKPNLVEMVWELMVQGKL  589 (705)
Q Consensus       512 FGla~~~~~~~~~~-~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~Ellt-G~~Pf~~~~~~~~~~v~~~~~~~~~  589 (705)
                      ||+++.+....... .....++..|+|||++.+..++.++|||||||++||+++ |+.||....+.  + .......+. 
T Consensus       161 ~g~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~--~-~~~~~~~~~-  236 (280)
T cd05043         161 NALSRDLFPMDYHCLGDNENRPVKWMALESLVNKEYSSASDVWSFGVLLWELMTLGQTPYVEIDPF--E-MAAYLKDGY-  236 (280)
T ss_pred             CCCcccccCCceEEeCCCCCcchhccCHHHHhcCCCCchhhHHHhHHHHHHHhcCCCCCcCcCCHH--H-HHHHHHcCC-
Confidence            99998654332211 112345678999999988889999999999999999999 99999764321  1 111111111 


Q ss_pred             hHHHHHhhhcCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHhccc
Q 005257          590 LDALDARLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLEGKIE  641 (705)
Q Consensus       590 ~~~id~~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~  641 (705)
                              .  ..........+.+++.+||+.||++|||+.++++.|+....
T Consensus       237 --------~--~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~~~~~  278 (280)
T cd05043         237 --------R--LAQPINCPDELFAVMACCWALDPEERPSFSQLVQCLTDFHA  278 (280)
T ss_pred             --------C--CCCCCcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHh
Confidence                    1  01112234568899999999999999999999999986644

Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It

>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1

Probab=100.00  E-value=4.6e-37  Score=324.99  Aligned_cols=258  Identities=27%  Similarity=0.445  Sum_probs=204.2

Q ss_pred             CCCCcceEEeecCceEEEEEEEcCCCe--EEEEEEeccC-CchhHHHHHHHHHHhccC-CCCCcceeeeeeeeccCceEE
Q 005257          364 KGFSEENVIGVGGNGKVYKGVLEGGGA--EIAVKRISHE-NDGGTRAFLAEISSLGRL-KHKSLVGLRGWCKREKGSLML  439 (705)
Q Consensus       364 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~--~vavK~i~~~-~~~~~~~~~~Ei~~l~~l-~Hpniv~l~g~~~~~~~~~~l  439 (705)
                      ++|+..+.||+|+||.||+|....++.  .+++|.++.. .....+.+.+|++++.++ +||||+++++++.. .+..++
T Consensus         2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~-~~~~~l   80 (297)
T cd05089           2 EDIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASENDHRDFAGELEVLCKLGHHPNIINLLGACEN-RGYLYI   80 (297)
T ss_pred             ccceeeeeecCCCcceEEEEEecCCCCcceeEEEEccccCCHHHHHHHHHHHHHHHhhcCCCchhheEEEEcc-CCcceE
Confidence            468889999999999999999876654  4788888643 334556789999999999 79999999998876 667899


Q ss_pred             EEeeCCCCChhHHHHhcCC-------------CCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCC
Q 005257          440 VYDYMENGSLDKWIFQCDG-------------SMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMN  506 (705)
Q Consensus       440 V~E~~~~gsL~~~L~~~~~-------------~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~  506 (705)
                      |+||+++++|.+++.....             ...+++..++.++.|++.||+|||+   .+++||||||+|||+++++.
T Consensus        81 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~---~~ivH~dlkp~Nill~~~~~  157 (297)
T cd05089          81 AIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSE---KQFIHRDLAARNVLVGENLA  157 (297)
T ss_pred             EEEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCcCCcceEEECCCCe
Confidence            9999999999999975321             1258899999999999999999998   99999999999999999999


Q ss_pred             eeeeeeccceecCCCCcceeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhh-CCCCCCCCCccHHHHHHHHHH
Q 005257          507 GRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLS-GRRPIEEGKPNLVEMVWELMV  585 (705)
Q Consensus       507 ~kL~DFGla~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~Ellt-G~~Pf~~~~~~~~~~v~~~~~  585 (705)
                      +||+|||++.......  .......+..|+|||++....++.++|||||||++|||++ |+.||......   .+.+...
T Consensus       158 ~kl~dfg~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t~g~~pf~~~~~~---~~~~~~~  232 (297)
T cd05089         158 SKIADFGLSRGEEVYV--KKTMGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWEIVSLGGTPYCGMTCA---ELYEKLP  232 (297)
T ss_pred             EEECCcCCCcccccee--ccCCCCcCccccCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHH---HHHHHHh
Confidence            9999999986432211  1111123557999999988889999999999999999997 99999764321   1111111


Q ss_pred             hCchhHHHHHhhhcCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHhccc
Q 005257          586 QGKLLDALDARLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLEGKIE  641 (705)
Q Consensus       586 ~~~~~~~id~~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~  641 (705)
                      .         ...  ...+......+.+++..||+.+|.+||++.++++.|+....
T Consensus       233 ~---------~~~--~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~~~  277 (297)
T cd05089         233 Q---------GYR--MEKPRNCDDEVYELMRQCWRDRPYERPPFAQISVQLSRMLE  277 (297)
T ss_pred             c---------CCC--CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence            1         111  11122344568899999999999999999999999987665

Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.

>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

Probab=100.00  E-value=4.7e-37  Score=319.30  Aligned_cols=257  Identities=29%  Similarity=0.519  Sum_probs=205.8

Q ss_pred             hCCCCcceEEeecCceEEEEEEEcCCCe---EEEEEEeccCC-chhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceE
Q 005257          363 TKGFSEENVIGVGGNGKVYKGVLEGGGA---EIAVKRISHEN-DGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLM  438 (705)
Q Consensus       363 t~~f~~~~~LG~G~fg~Vy~~~~~~~~~---~vavK~i~~~~-~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~  438 (705)
                      .++|+..+.||+|+||.||+|....++.   .+|+|.+.... ....+++.+|++++.+++|||++++.+++.. .+..+
T Consensus         4 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~   82 (268)
T cd05063           4 PSHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSHHNIIRLEGVVTK-FKPAM   82 (268)
T ss_pred             hHHceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCCCeeEEEEEEcc-CCCcE
Confidence            3467788999999999999999875543   79999986553 3445679999999999999999999998876 66889


Q ss_pred             EEEeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceec
Q 005257          439 LVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMH  518 (705)
Q Consensus       439 lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~  518 (705)
                      +||||+++++|.+++....  ..+++.++..++.|++.||+|||+   .+++||||||+||++++++.+||+|||++...
T Consensus        83 lv~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~~~l~~al~~lH~---~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~  157 (268)
T cd05063          83 IITEYMENGALDKYLRDHD--GEFSSYQLVGMLRGIAAGMKYLSD---MNYVHRDLAARNILVNSNLECKVSDFGLSRVL  157 (268)
T ss_pred             EEEEcCCCCCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHH---CCeeccccchhhEEEcCCCcEEECCCccceec
Confidence            9999999999999997543  268999999999999999999998   99999999999999999999999999999866


Q ss_pred             CCCCcceee--eeeccccCCCccccccCCCCccccEEEEehhHHHHhh-CCCCCCCCCccHHHHHHHHHHhCchhHHHHH
Q 005257          519 GHGQVASTT--RVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLS-GRRPIEEGKPNLVEMVWELMVQGKLLDALDA  595 (705)
Q Consensus       519 ~~~~~~~~~--~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~Ellt-G~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~  595 (705)
                      .........  ....+..|+|||++....++.++|||||||++|||++ |+.||......  + ....+..+        
T Consensus       158 ~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~il~ell~~g~~p~~~~~~~--~-~~~~i~~~--------  226 (268)
T cd05063         158 EDDPEGTYTTSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSFGERPYWDMSNH--E-VMKAINDG--------  226 (268)
T ss_pred             ccccccceeccCCCcCceecCHHHhhcCCcChHhHHHHHHHHHHHHHhCCCCCCCcCCHH--H-HHHHHhcC--------
Confidence            433221111  1123457999999988889999999999999999997 99999654321  1 11222111        


Q ss_pred             hhhcCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHhc
Q 005257          596 RLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLEGK  639 (705)
Q Consensus       596 ~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~  639 (705)
                       ..  .....+....+.+++.+||+.+|++||++.++++.|++.
T Consensus       227 -~~--~~~~~~~~~~~~~li~~c~~~~p~~Rp~~~~i~~~l~~~  267 (268)
T cd05063         227 -FR--LPAPMDCPSAVYQLMLQCWQQDRARRPRFVDIVNLLDKL  267 (268)
T ss_pred             -CC--CCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence             11  112223456789999999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored

>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

Probab=100.00  E-value=3.1e-37  Score=322.65  Aligned_cols=258  Identities=25%  Similarity=0.415  Sum_probs=204.8

Q ss_pred             HhCCCCcceEEeecCceEEEEEEEcC-----CCeEEEEEEeccCCc-hhHHHHHHHHHHhccCCCCCcceeeeeeeeccC
Q 005257          362 ATKGFSEENVIGVGGNGKVYKGVLEG-----GGAEIAVKRISHEND-GGTRAFLAEISSLGRLKHKSLVGLRGWCKREKG  435 (705)
Q Consensus       362 at~~f~~~~~LG~G~fg~Vy~~~~~~-----~~~~vavK~i~~~~~-~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~  435 (705)
                      .+++|...+.||+|++|.||+|.+..     .+..||+|.+..... .....|.+|+.++++++|+||+++++++.. ..
T Consensus         4 ~~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~   82 (277)
T cd05036           4 PRDSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKFNHQNIVRLIGVSFE-RL   82 (277)
T ss_pred             CHHHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEcc-CC
Confidence            35678889999999999999999976     678899998865433 334579999999999999999999998876 56


Q ss_pred             ceEEEEeeCCCCChhHHHHhcCC----CCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCC---Cee
Q 005257          436 SLMLVYDYMENGSLDKWIFQCDG----SMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEM---NGR  508 (705)
Q Consensus       436 ~~~lV~E~~~~gsL~~~L~~~~~----~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~---~~k  508 (705)
                      ..++||||+++++|.+++.....    ...+++.++++++.||+.||.|||+   .+++||||||+||+++.++   .+|
T Consensus        83 ~~~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~---~~ivH~dlkp~nil~~~~~~~~~~k  159 (277)
T cd05036          83 PRFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEE---NHFIHRDIAARNCLLTCKGPGRVAK  159 (277)
T ss_pred             CcEEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH---CCEeecccchheEEEeccCCCcceE
Confidence            78999999999999999976432    1258999999999999999999998   8999999999999998754   589


Q ss_pred             eeeeccceecCCCCcce-eeeeeccccCCCccccccCCCCccccEEEEehhHHHHhh-CCCCCCCCCccHHHHHHHHHHh
Q 005257          509 LGDFGLARMHGHGQVAS-TTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLS-GRRPIEEGKPNLVEMVWELMVQ  586 (705)
Q Consensus       509 L~DFGla~~~~~~~~~~-~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~Ellt-G~~Pf~~~~~~~~~~v~~~~~~  586 (705)
                      |+|||+++......... ......+..|+|||++.+..++.++|||||||++|||++ |+.||......   .....+..
T Consensus       160 l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~~g~~pf~~~~~~---~~~~~~~~  236 (277)
T cd05036         160 IADFGMARDIYRASYYRKGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIFSLGYMPYPGRTNQ---EVMEFVTG  236 (277)
T ss_pred             eccCccccccCCccceecCCCCCccHhhCCHHHHhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHH---HHHHHHHc
Confidence            99999998663322111 112233568999999988899999999999999999997 99999764321   11111111


Q ss_pred             CchhHHHHHhhhcCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHH
Q 005257          587 GKLLDALDARLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLE  637 (705)
Q Consensus       587 ~~~~~~id~~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  637 (705)
                      .         .+  ...+......+.+++.+||+.+|++||++.++++.|+
T Consensus       237 ~---------~~--~~~~~~~~~~~~~~i~~cl~~~p~~Rps~~~vl~~l~  276 (277)
T cd05036         237 G---------GR--LDPPKGCPGPVYRIMTDCWQHTPEDRPNFATILERIQ  276 (277)
T ss_pred             C---------Cc--CCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHhh
Confidence            1         11  1222334467889999999999999999999999886

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well

>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

Probab=100.00  E-value=4.5e-37  Score=329.51  Aligned_cols=242  Identities=25%  Similarity=0.311  Sum_probs=192.0

Q ss_pred             eEEeecCceEEEEEEEcCCCeEEEEEEeccCC---chhHHHHHHHHH-HhccCCCCCcceeeeeeeeccCceEEEEeeCC
Q 005257          370 NVIGVGGNGKVYKGVLEGGGAEIAVKRISHEN---DGGTRAFLAEIS-SLGRLKHKSLVGLRGWCKREKGSLMLVYDYME  445 (705)
Q Consensus       370 ~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~---~~~~~~~~~Ei~-~l~~l~Hpniv~l~g~~~~~~~~~~lV~E~~~  445 (705)
                      +.||+|+||.||+|.+..+++.||+|++....   ......+..|.. +++.++||||+++++++.. .+.+++||||++
T Consensus         1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~-~~~~~lv~e~~~   79 (325)
T cd05602           1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQT-ADKLYFVLDYIN   79 (325)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEc-CCeEEEEEeCCC
Confidence            46999999999999999889999999986532   222344555544 5678899999999998876 678999999999


Q ss_pred             CCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecCCCCcce
Q 005257          446 NGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVAS  525 (705)
Q Consensus       446 ~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~~~~~~~  525 (705)
                      +|+|.+++....   .+++..+..++.||+.||.|||+   .+|+||||||+|||++.++.+||+|||+++....... .
T Consensus        80 ~~~L~~~~~~~~---~~~~~~~~~~~~qi~~~L~~lH~---~giiHrDlkp~Nili~~~~~~kl~DfG~a~~~~~~~~-~  152 (325)
T cd05602          80 GGELFYHLQRER---CFLEPRARFYAAEIASALGYLHS---LNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNG-T  152 (325)
T ss_pred             CCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHH---CCeEecCCCHHHeEECCCCCEEEccCCCCcccccCCC-C
Confidence            999999987533   57888899999999999999998   9999999999999999999999999999975432221 2


Q ss_pred             eeeeeccccCCCccccccCCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhHHHHHhhhcCCCCCH
Q 005257          526 TTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRAKGGFDE  605 (705)
Q Consensus       526 ~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~l~~~~~~~~  605 (705)
                      .....||+.|+|||++.+..++.++|||||||++|||++|+.||......  +. ...+....            .....
T Consensus       153 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~--~~-~~~i~~~~------------~~~~~  217 (325)
T cd05602         153 TSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTA--EM-YDNILNKP------------LQLKP  217 (325)
T ss_pred             cccccCCccccCHHHHcCCCCCCccccccccHHHHHHhcCCCCCCCCCHH--HH-HHHHHhCC------------cCCCC
Confidence            33457999999999999989999999999999999999999999764421  11 11111110            11222


Q ss_pred             HHHHHHHHHHHHcCCCCCCCCCCHHHHHH
Q 005257          606 DEVERVLHLGLLCAYPDPRARPTMRQVVK  634 (705)
Q Consensus       606 ~~~~~l~~l~~~Cl~~dP~~RPs~~evl~  634 (705)
                      .....+.+++..|++.||.+||++.+.+.
T Consensus       218 ~~~~~~~~li~~~l~~~p~~R~~~~~~~~  246 (325)
T cd05602         218 NITNSARHLLEGLLQKDRTKRLGAKDDFM  246 (325)
T ss_pred             CCCHHHHHHHHHHcccCHHHCCCCCCCHH
Confidence            33456788999999999999999875443

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt

>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=1e-36  Score=315.51  Aligned_cols=252  Identities=25%  Similarity=0.395  Sum_probs=204.9

Q ss_pred             CCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCCc-----hhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceE
Q 005257          364 KGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHEND-----GGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLM  438 (705)
Q Consensus       364 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~-----~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~  438 (705)
                      ++|...+.||+|++|.||++....+++.+|+|.+.....     ...+.+.+|++++++++||||+++++++.. +...+
T Consensus         2 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~~   80 (263)
T cd06625           2 TNWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLRD-DETLS   80 (263)
T ss_pred             CcccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEcc-CCeEE
Confidence            578899999999999999999988899999998864321     234578899999999999999999998876 56899


Q ss_pred             EEEeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceec
Q 005257          439 LVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMH  518 (705)
Q Consensus       439 lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~  518 (705)
                      +|+||+++++|.+++....   .+++..+..++.|++.||.|||+   .+++||||+|+||++++++.++|+|||+++..
T Consensus        81 ~v~e~~~~~~l~~~~~~~~---~~~~~~~~~~~~~l~~~l~~lH~---~~i~H~dl~p~nilv~~~~~~~l~dfg~~~~~  154 (263)
T cd06625          81 IFMEYMPGGSVKDQLKAYG---ALTETVTRKYTRQILEGVEYLHS---NMIVHRDIKGANILRDSAGNVKLGDFGASKRL  154 (263)
T ss_pred             EEEEECCCCcHHHHHHHhC---CCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEcCCCCEEEeecccceec
Confidence            9999999999999987543   58899999999999999999998   99999999999999999999999999999765


Q ss_pred             CCCCccee--eeeeccccCCCccccccCCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhHHHHHh
Q 005257          519 GHGQVAST--TRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDAR  596 (705)
Q Consensus       519 ~~~~~~~~--~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~  596 (705)
                      ........  ....|+..|+|||++.+..++.++|||||||++|||++|+.||......  ..........         
T Consensus       155 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~--~~~~~~~~~~---------  223 (263)
T cd06625         155 QTICSSGTGMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEMLTEKPPWAEFEAM--AAIFKIATQP---------  223 (263)
T ss_pred             cccccccccccCCCcCccccCcceeccCCCCchhhhHHHHHHHHHHHhCCCCccccchH--HHHHHHhccC---------
Confidence            43221111  2345788999999999888999999999999999999999999754321  1111111100         


Q ss_pred             hhcCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 005257          597 LRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKV  635 (705)
Q Consensus       597 l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  635 (705)
                      .  ....+......+.+++..||..+|++||++.+++++
T Consensus       224 ~--~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~  260 (263)
T cd06625         224 T--NPQLPSHVSPDARNFLRRTFVENAKKRPSAEELLRH  260 (263)
T ss_pred             C--CCCCCccCCHHHHHHHHHHhhcCcccCCCHHHHhhC
Confidence            0  012233445678899999999999999999999875

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t

>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

Probab=100.00  E-value=8.5e-37  Score=321.12  Aligned_cols=252  Identities=27%  Similarity=0.415  Sum_probs=201.9

Q ss_pred             CCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCC---chhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEEEEe
Q 005257          366 FSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHEN---DGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYD  442 (705)
Q Consensus       366 f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~---~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~lV~E  442 (705)
                      |+..+.||+|+||.||++....+++.||||.+....   ....+.+.+|+.++++++|+|++++++.+.. ++..++|||
T Consensus         2 f~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~-~~~~~lv~e   80 (285)
T cd05630           2 FRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAYET-KDALCLVLT   80 (285)
T ss_pred             ceeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEEec-CCEEEEEEE
Confidence            677889999999999999999999999999986542   2223567889999999999999999998876 668999999


Q ss_pred             eCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecCCCC
Q 005257          443 YMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQ  522 (705)
Q Consensus       443 ~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~~~~  522 (705)
                      |+++++|.+++..... ..+++.++..++.|++.||.|||+   .+|+||||||+||+++.++.++|+|||++.......
T Consensus        81 ~~~g~~L~~~l~~~~~-~~l~~~~~~~~~~qi~~~l~~lH~---~~iiH~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~  156 (285)
T cd05630          81 LMNGGDLKFHIYHMGE-AGFEEGRAVFYAAEICCGLEDLHQ---ERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQ  156 (285)
T ss_pred             ecCCCcHHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHh---CCEEeCCCCHHHEEECCCCCEEEeeccceeecCCCc
Confidence            9999999999865433 268999999999999999999998   999999999999999999999999999997654332


Q ss_pred             cceeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhHHHHHhhhcCCC
Q 005257          523 VASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRAKGG  602 (705)
Q Consensus       523 ~~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~l~~~~~  602 (705)
                      .  .....|+..|+|||++.+..++.++|||||||++|||++|+.||................     ....      ..
T Consensus       157 ~--~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~~~~~~~~~~-----~~~~------~~  223 (285)
T cd05630         157 T--IKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLV-----KEVQ------EE  223 (285)
T ss_pred             c--ccCCCCCccccChHHHcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCccchHHHHHhhh-----hhhh------hh
Confidence            2  122468999999999998899999999999999999999999997643221111111100     0000      11


Q ss_pred             CCHHHHHHHHHHHHHcCCCCCCCCCC-----HHHHHHH
Q 005257          603 FDEDEVERVLHLGLLCAYPDPRARPT-----MRQVVKV  635 (705)
Q Consensus       603 ~~~~~~~~l~~l~~~Cl~~dP~~RPs-----~~evl~~  635 (705)
                      +.......+.+++..||+.||++|||     +.|++++
T Consensus       224 ~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~~~~~h  261 (285)
T cd05630         224 YSEKFSPDARSLCKMLLCKDPKERLGCQGGGAREVKEH  261 (285)
T ss_pred             cCccCCHHHHHHHHHHhhcCHHHccCCCCCchHHHHcC
Confidence            12223456789999999999999999     7777763

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as

>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3

Probab=100.00  E-value=2.1e-36  Score=312.01  Aligned_cols=251  Identities=24%  Similarity=0.380  Sum_probs=205.3

Q ss_pred             CCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccC-CchhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEEEEee
Q 005257          365 GFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHE-NDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDY  443 (705)
Q Consensus       365 ~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~-~~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~lV~E~  443 (705)
                      +|+..+.||+|+||.||++....+++.+|+|.++.. .....+.+.+|+.++++++||||+++++.+.. ++.++++|||
T Consensus         1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~lv~e~   79 (255)
T cd08219           1 QYNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKSSSAVEDSRKEAVLLAKMKHPNIVAFKESFEA-DGHLYIVMEY   79 (255)
T ss_pred             CceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCcchHHHHHHHHHHHHHHhCCCCCcceEEEEEEE-CCEEEEEEee
Confidence            467789999999999999999989999999998654 33445678899999999999999999998875 6789999999


Q ss_pred             CCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecCCCCc
Q 005257          444 MENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQV  523 (705)
Q Consensus       444 ~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~~~~~  523 (705)
                      +++|+|.+++...... .+++..+..++.|++.||.|||+   ++++|+||||+||++++++.++|+|||+++.......
T Consensus        80 ~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~i~~al~~lH~---~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~  155 (255)
T cd08219          80 CDGGDLMQKIKLQRGK-LFPEDTILQWFVQMCLGVQHIHE---KRVLHRDIKSKNIFLTQNGKVKLGDFGSARLLTSPGA  155 (255)
T ss_pred             CCCCcHHHHHHhccCC-CCCHHHHHHHHHHHHHHHHHHhh---CCcccCCCCcceEEECCCCcEEEcccCcceeeccccc
Confidence            9999999988654332 58999999999999999999998   9999999999999999999999999999986644322


Q ss_pred             ceeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhHHHHHhhhcCCCC
Q 005257          524 ASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRAKGGF  603 (705)
Q Consensus       524 ~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~l~~~~~~  603 (705)
                       ......|++.|+|||++.+..++.++||||||+++|+|++|+.||......  ... .....+..           ...
T Consensus       156 -~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~--~~~-~~~~~~~~-----------~~~  220 (255)
T cd08219         156 -YACTYVGTPYYVPPEIWENMPYNNKSDIWSLGCILYELCTLKHPFQANSWK--NLI-LKVCQGSY-----------KPL  220 (255)
T ss_pred             -ccccccCCccccCHHHHccCCcCchhhhhhhchhheehhhccCCCCCCCHH--HHH-HHHhcCCC-----------CCC
Confidence             122356889999999998888999999999999999999999999764321  111 11111111           112


Q ss_pred             CHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 005257          604 DEDEVERVLHLGLLCAYPDPRARPTMRQVVKV  635 (705)
Q Consensus       604 ~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  635 (705)
                      +......+.+++.+||+.||++||++.+++..
T Consensus       221 ~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~  252 (255)
T cd08219         221 PSHYSYELRSLIKQMFKRNPRSRPSATTILSR  252 (255)
T ss_pred             CcccCHHHHHHHHHHHhCCcccCCCHHHHhhc
Confidence            22334567889999999999999999999864

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati

>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

Probab=100.00  E-value=4.2e-37  Score=320.16  Aligned_cols=256  Identities=24%  Similarity=0.356  Sum_probs=203.4

Q ss_pred             HHhCCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCCchhHHHHHHHHHHhccC-CCCCcceeeeeeeec-----c
Q 005257          361 AATKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRL-KHKSLVGLRGWCKRE-----K  434 (705)
Q Consensus       361 ~at~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~~~~~~~~~Ei~~l~~l-~Hpniv~l~g~~~~~-----~  434 (705)
                      .+++.|+..+.||+|+||.||+|....+++.||+|++.... .....+.+|+.++.++ +||||+++++++...     .
T Consensus         3 ~~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~-~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~   81 (272)
T cd06637           3 DPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG-DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMD   81 (272)
T ss_pred             ChhhhhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcCC-ccHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCCCC
Confidence            45677888999999999999999999899999999986543 3456788999999998 799999999988653     2


Q ss_pred             CceEEEEeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeecc
Q 005257          435 GSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGL  514 (705)
Q Consensus       435 ~~~~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGl  514 (705)
                      ..+++||||+++++|.+++..... ..+++..+..++.|++.||+|||+   ++|+|+||||+||++++++.+||+|||+
T Consensus        82 ~~~~iv~e~~~~~~L~~~l~~~~~-~~l~~~~~~~~~~qi~~~l~~LH~---~~ivh~dl~~~nili~~~~~~~l~Dfg~  157 (272)
T cd06637          82 DQLWLVMEFCGAGSVTDLIKNTKG-NTLKEEWIAYICREILRGLSHLHQ---HKVIHRDIKGQNVLLTENAEVKLVDFGV  157 (272)
T ss_pred             cEEEEEEEcCCCCcHHHHHHhccC-CCCCHHHHHHHHHHHHHHHHHHHH---CCCccCCCCHHHEEECCCCCEEEccCCC
Confidence            357999999999999999976433 268999999999999999999998   9999999999999999999999999999


Q ss_pred             ceecCCCCcceeeeeeccccCCCccccc-----cCCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCch
Q 005257          515 ARMHGHGQVASTTRVVGTVGYLAPEVFS-----SGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKL  589 (705)
Q Consensus       515 a~~~~~~~~~~~~~~~gt~~y~APE~~~-----~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~  589 (705)
                      ++....... ......|+..|+|||++.     ...++.++|||||||++|||++|+.||.......  ....... .. 
T Consensus       158 ~~~~~~~~~-~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~p~~~~~~~~--~~~~~~~-~~-  232 (272)
T cd06637         158 SAQLDRTVG-RRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMR--ALFLIPR-NP-  232 (272)
T ss_pred             ceecccccc-cCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCCCCccccCHHH--HHHHHhc-CC-
Confidence            986543222 223357899999999986     3357889999999999999999999996543211  0000000 00 


Q ss_pred             hHHHHHhhhcCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 005257          590 LDALDARLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKV  635 (705)
Q Consensus       590 ~~~id~~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  635 (705)
                             ..  ..........+.+++.+||+.+|.+||++.+++++
T Consensus       233 -------~~--~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~  269 (272)
T cd06637         233 -------AP--RLKSKKWSKKFQSFIESCLVKNHSQRPTTEQLMKH  269 (272)
T ss_pred             -------CC--CCCCCCcCHHHHHHHHHHcCCChhhCCCHHHHhhC
Confidence                   00  11112234568899999999999999999998763

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ

>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=100.00  E-value=5.8e-37  Score=321.50  Aligned_cols=264  Identities=27%  Similarity=0.418  Sum_probs=203.4

Q ss_pred             CcceEEeecCceEEEEEEE----cCCCeEEEEEEeccCCc-hhHHHHHHHHHHhccCCCCCcceeeeeeeecc-CceEEE
Q 005257          367 SEENVIGVGGNGKVYKGVL----EGGGAEIAVKRISHEND-GGTRAFLAEISSLGRLKHKSLVGLRGWCKREK-GSLMLV  440 (705)
Q Consensus       367 ~~~~~LG~G~fg~Vy~~~~----~~~~~~vavK~i~~~~~-~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~-~~~~lV  440 (705)
                      ...+.||+|+||+||++..    ..++..||+|.++.... .....+.+|++++++++||||++++++|.... ..+++|
T Consensus         7 ~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv   86 (283)
T cd05080           7 KKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTLYHENIVKYKGCCSEQGGKGLQLI   86 (283)
T ss_pred             eeceecccCCCcEEEEeeEccccCCCCceEEEEEeccccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCceEEEE
Confidence            7789999999999988653    34577899999876533 34567889999999999999999999886533 357899


Q ss_pred             EeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecCC
Q 005257          441 YDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGH  520 (705)
Q Consensus       441 ~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~~  520 (705)
                      |||+++++|.+++...    .+++.+++.++.|++.||.|||+   .+++||||||+|||++.++.+||+|||+++....
T Consensus        87 ~e~~~~~~l~~~~~~~----~l~~~~~~~i~~~l~~~l~~lH~---~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~  159 (283)
T cd05080          87 MEYVPLGSLRDYLPKH----KLNLAQLLLFAQQICEGMAYLHS---QHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPE  159 (283)
T ss_pred             ecCCCCCCHHHHHHHc----CCCHHHHHHHHHHHHHHHHHHHH---CCeeccccChheEEEcCCCcEEEeecccccccCC
Confidence            9999999999999642    48999999999999999999998   9999999999999999999999999999986654


Q ss_pred             CCcce--eeeeeccccCCCccccccCCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHH---HhCchhHHHHH
Q 005257          521 GQVAS--TTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELM---VQGKLLDALDA  595 (705)
Q Consensus       521 ~~~~~--~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~---~~~~~~~~id~  595 (705)
                      .....  .....++..|+|||.+....++.++|||||||++|||++|+.|+........+......   ....+.+.++.
T Consensus       160 ~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (283)
T cd05080         160 GHEYYRVREDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYELLTHCDSKQSPPKKFEEMIGPKQGQMTVVRLIELLER  239 (283)
T ss_pred             cchhhccCCCCCCCceeeCHhHhcccCCCcccccHHHHHHHHHHHhCCCCCCCCcchhhhhhcccccccchhhhhhhhhc
Confidence            32211  11123466799999998888999999999999999999999998654322111110000   00111111111


Q ss_pred             hhhcCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHhc
Q 005257          596 RLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLEGK  639 (705)
Q Consensus       596 ~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~  639 (705)
                      ...  ...+......+.+++..||+++|++||+++++++.|+..
T Consensus       240 ~~~--~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~i~~~l~~~  281 (283)
T cd05080         240 GMR--LPCPKNCPQEVYILMKNCWETEAKFRPTFRSLIPILKEM  281 (283)
T ss_pred             CCC--CCCCCCCCHHHHHHHHHHhccChhhCCCHHHHHHHHHHh
Confidence            111  112333456789999999999999999999999999854

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign

>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases

Probab=100.00  E-value=3.8e-37  Score=318.06  Aligned_cols=250  Identities=29%  Similarity=0.452  Sum_probs=200.1

Q ss_pred             CCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCCchhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEEEEeeC
Q 005257          365 GFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYM  444 (705)
Q Consensus       365 ~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~lV~E~~  444 (705)
                      +|+..+.||+|+||.||+|.++. +..+|+|.+.... .....+.+|+++++.++||||+++++++.. .+..++||||+
T Consensus         5 ~~~~~~~lg~G~~~~v~~~~~~~-~~~~~iK~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~~lv~e~~   81 (256)
T cd05059           5 ELTFLKELGSGQFGVVHLGKWRG-KIDVAIKMIREGA-MSEDDFIEEAKVMMKLSHPNLVQLYGVCTK-QRPIFIVTEYM   81 (256)
T ss_pred             HcchhhhhccCCCceEEEeEecC-CccEEEEEeccCC-CCHHHHHHHHHHHHhCCCCCEEEEEEEEcC-CCceEEEEecC
Confidence            46778899999999999998864 5679999885432 234578899999999999999999998875 66889999999


Q ss_pred             CCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecCCCCcc
Q 005257          445 ENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVA  524 (705)
Q Consensus       445 ~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~~~~~~  524 (705)
                      ++++|.+++.....  .+++..++.++.|++.||+|||+   .+++||||||+||++++++.+||+|||+++........
T Consensus        82 ~~~~L~~~l~~~~~--~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dl~p~ni~i~~~~~~kl~dfg~~~~~~~~~~~  156 (256)
T cd05059          82 ANGCLLNYLRERKG--KLGTEWLLDMCSDVCEAMEYLES---NGFIHRDLAARNCLVGEDNVVKVSDFGLARYVLDDQYT  156 (256)
T ss_pred             CCCCHHHHHHhccc--CCCHHHHHHHHHHHHHHHHHHHH---CCcccccccHhhEEECCCCcEEECCcccceeccccccc
Confidence            99999999976443  68999999999999999999998   99999999999999999999999999999865432221


Q ss_pred             eeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhh-CCCCCCCCCccHHHHHHHHHHhCchhHHHHHhhhcCCCC
Q 005257          525 STTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLS-GRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRAKGGF  603 (705)
Q Consensus       525 ~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~Ellt-G~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~l~~~~~~  603 (705)
                      ......++..|+|||.+.+..++.++|||||||++|||++ |+.||......  + .......+         ..  ...
T Consensus       157 ~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~--~-~~~~~~~~---------~~--~~~  222 (256)
T cd05059         157 SSQGTKFPVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYERFSNS--E-VVESVSAG---------YR--LYR  222 (256)
T ss_pred             ccCCCCCCccccCHHHhccCCCCchhhHHHHHHHHHHHhccCCCCCCCCCHH--H-HHHHHHcC---------Cc--CCC
Confidence            1111223457999999998899999999999999999999 89998754321  1 11111111         11  111


Q ss_pred             CHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Q 005257          604 DEDEVERVLHLGLLCAYPDPRARPTMRQVVKVL  636 (705)
Q Consensus       604 ~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L  636 (705)
                      +......+.+++.+||+.+|++||++.++++.|
T Consensus       223 ~~~~~~~~~~li~~cl~~~p~~Rpt~~~~l~~l  255 (256)
T cd05059         223 PKLAPTEVYTIMYSCWHEKPEDRPAFKKLLSQL  255 (256)
T ss_pred             CCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHh
Confidence            223456789999999999999999999999876

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows

>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

Probab=100.00  E-value=1.7e-36  Score=312.65  Aligned_cols=252  Identities=25%  Similarity=0.412  Sum_probs=206.3

Q ss_pred             CCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCC--chhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEEEEe
Q 005257          365 GFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHEN--DGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYD  442 (705)
Q Consensus       365 ~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~--~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~lV~E  442 (705)
                      +|+..+.||+|++|.||++....+++.+|+|++....  ....+.+.+|++++++++|+|++++++.+...+..++++||
T Consensus         1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e   80 (257)
T cd08223           1 AYCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIVAYRESWEGEDGLLYIVMG   80 (257)
T ss_pred             CceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhCCCCCeeeeeeeecCCCCEEEEEec
Confidence            4788899999999999999999889999999986542  34456789999999999999999999877654556899999


Q ss_pred             eCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecCCCC
Q 005257          443 YMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQ  522 (705)
Q Consensus       443 ~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~~~~  522 (705)
                      |+++++|.+++..... ..+++.++..++.|++.||.+||+   .+++|+||||+||+++.++.++|+|||++.......
T Consensus        81 ~~~~~~l~~~l~~~~~-~~l~~~~~~~~~~~l~~~l~~lH~---~~i~H~di~p~nil~~~~~~~~l~df~~~~~~~~~~  156 (257)
T cd08223          81 FCEGGDLYHKLKEQKG-KLLPENQVVEWFVQIAMALQYLHE---KHILHRDLKTQNVFLTRTNIIKVGDLGIARVLENQC  156 (257)
T ss_pred             ccCCCcHHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHh---CCeeccCCCchhEEEecCCcEEEecccceEEecccC
Confidence            9999999999976433 268999999999999999999998   999999999999999999999999999998764332


Q ss_pred             cceeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhHHHHHhhhcCCC
Q 005257          523 VASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRAKGG  602 (705)
Q Consensus       523 ~~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~l~~~~~  602 (705)
                      . ......|++.|+|||++.+..++.++|||||||+++||++|+.||.....  .... ..+..+..           ..
T Consensus       157 ~-~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~--~~~~-~~~~~~~~-----------~~  221 (257)
T cd08223         157 D-MASTLIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMATLKHAFNAKDM--NSLV-YRIIEGKL-----------PP  221 (257)
T ss_pred             C-ccccccCCcCccChhHhcCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCH--HHHH-HHHHhcCC-----------CC
Confidence            2 22335688999999999988899999999999999999999999975432  1111 11112211           12


Q ss_pred             CCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 005257          603 FDEDEVERVLHLGLLCAYPDPRARPTMRQVVKV  635 (705)
Q Consensus       603 ~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  635 (705)
                      .+......+.+++.+|++++|++||++.+++++
T Consensus       222 ~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~  254 (257)
T cd08223         222 MPKDYSPELGELIATMLSKRPEKRPSVKSILRQ  254 (257)
T ss_pred             CccccCHHHHHHHHHHhccCcccCCCHHHHhcC
Confidence            233445678899999999999999999998863

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.

>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

Probab=100.00  E-value=8.3e-37  Score=318.82  Aligned_cols=257  Identities=23%  Similarity=0.422  Sum_probs=206.2

Q ss_pred             hCCCCcceEEeecCceEEEEEEEcCC-----CeEEEEEEeccCC-chhHHHHHHHHHHhccCCCCCcceeeeeeeeccCc
Q 005257          363 TKGFSEENVIGVGGNGKVYKGVLEGG-----GAEIAVKRISHEN-DGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGS  436 (705)
Q Consensus       363 t~~f~~~~~LG~G~fg~Vy~~~~~~~-----~~~vavK~i~~~~-~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~  436 (705)
                      .++|...+.||+|+||.||+|.....     +..||+|.+.... ......+.+|+.++..++||||+++++++.. ...
T Consensus         5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~-~~~   83 (277)
T cd05032           5 REKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEFNCHHVVRLLGVVST-GQP   83 (277)
T ss_pred             hHHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccCHHHHHHHHHHHHHHHhCCCCceeEEEEEEcC-CCC
Confidence            35678889999999999999998643     3789999986543 3445678999999999999999999998876 578


Q ss_pred             eEEEEeeCCCCChhHHHHhcCC-------CCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeee
Q 005257          437 LMLVYDYMENGSLDKWIFQCDG-------SMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRL  509 (705)
Q Consensus       437 ~~lV~E~~~~gsL~~~L~~~~~-------~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL  509 (705)
                      .++||||+++|+|.+++.....       ...+++..++.++.|++.||.|||+   .+++||||||+||+++.++.+||
T Consensus        84 ~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~di~p~nill~~~~~~kl  160 (277)
T cd05032          84 TLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAA---KKFVHRDLAARNCMVAEDLTVKI  160 (277)
T ss_pred             cEEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHh---CCccccccChheEEEcCCCCEEE
Confidence            8999999999999999975321       2247899999999999999999998   99999999999999999999999


Q ss_pred             eeeccceecCCCCc-ceeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhh-CCCCCCCCCccHHHHHHHHHHhC
Q 005257          510 GDFGLARMHGHGQV-ASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLS-GRRPIEEGKPNLVEMVWELMVQG  587 (705)
Q Consensus       510 ~DFGla~~~~~~~~-~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~Ellt-G~~Pf~~~~~~~~~~v~~~~~~~  587 (705)
                      +|||+++....... .......++..|+|||.+.+..++.++|||||||++|||++ |+.||......   ........+
T Consensus       161 ~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~---~~~~~~~~~  237 (277)
T cd05032         161 GDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVLWEMATLAEQPYQGLSNE---EVLKFVIDG  237 (277)
T ss_pred             CCcccchhhccCcccccCCCCCccccccCHHHHhcCCCCcccchHHHHHHHHHhhccCCCCCccCCHH---HHHHHHhcC
Confidence            99999976543321 12222356789999999988889999999999999999998 99998754321   111222121


Q ss_pred             chhHHHHHhhhcCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHH
Q 005257          588 KLLDALDARLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLE  637 (705)
Q Consensus       588 ~~~~~id~~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  637 (705)
                      ..           ...+......+.+++..||+.+|++|||+.++++.|+
T Consensus       238 ~~-----------~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~  276 (277)
T cd05032         238 GH-----------LDLPENCPDKLLELMRMCWQYNPKMRPTFLEIVSSLK  276 (277)
T ss_pred             CC-----------CCCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHHHhc
Confidence            11           1122233567899999999999999999999999886

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological

>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

Probab=100.00  E-value=5.3e-37  Score=323.12  Aligned_cols=259  Identities=28%  Similarity=0.451  Sum_probs=206.0

Q ss_pred             CCCcceEEeecCceEEEEEEEcC-----CCeEEEEEEeccCCc-hhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceE
Q 005257          365 GFSEENVIGVGGNGKVYKGVLEG-----GGAEIAVKRISHEND-GGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLM  438 (705)
Q Consensus       365 ~f~~~~~LG~G~fg~Vy~~~~~~-----~~~~vavK~i~~~~~-~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~  438 (705)
                      +|+..+.||+|+||.||+|....     ....+++|.+..... ...+.+.+|+.+++.++||||+++++.|.. ++..+
T Consensus         1 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-~~~~~   79 (290)
T cd05045           1 NLVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQVNHPHVIKLYGACSQ-DGPLL   79 (290)
T ss_pred             CccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCCHHHHHHHHHHHHHHhhCCCCCEeeEEEEEec-CCCcE
Confidence            46778899999999999998743     235799998875543 345678999999999999999999998876 66789


Q ss_pred             EEEeeCCCCChhHHHHhcC---------------------CCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCC
Q 005257          439 LVYDYMENGSLDKWIFQCD---------------------GSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSS  497 (705)
Q Consensus       439 lV~E~~~~gsL~~~L~~~~---------------------~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~  497 (705)
                      +++||+++|+|.+++....                     ....+++..++.++.|++.||.|||+   .+++||||||+
T Consensus        80 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~---~~ivH~dikp~  156 (290)
T cd05045          80 LIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAE---MKLVHRDLAAR  156 (290)
T ss_pred             EEEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHH---CCeehhhhhhh
Confidence            9999999999999986431                     11358899999999999999999998   99999999999


Q ss_pred             CeEEccCCCeeeeeeccceecCCCCcc-eeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhh-CCCCCCCCCcc
Q 005257          498 NVLLDKEMNGRLGDFGLARMHGHGQVA-STTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLS-GRRPIEEGKPN  575 (705)
Q Consensus       498 NILld~~~~~kL~DFGla~~~~~~~~~-~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~Ellt-G~~Pf~~~~~~  575 (705)
                      |||+++++.+||+|||+++........ ......++..|+|||.+.+..++.++||||||+++|||++ |+.||....+ 
T Consensus       157 nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~-  235 (290)
T cd05045         157 NVLVAEGRKMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIAP-  235 (290)
T ss_pred             eEEEcCCCcEEeccccccccccCccchhcccCCCCCccccCHHHHccCCcchHhHHHHHHHHHHHHHhcCCCCCCCCCH-
Confidence            999999999999999999865332211 1122345678999999988889999999999999999998 9999975432 


Q ss_pred             HHHHHHHHHHhCchhHHHHHhhhcCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHhccc
Q 005257          576 LVEMVWELMVQGKLLDALDARLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLEGKIE  641 (705)
Q Consensus       576 ~~~~v~~~~~~~~~~~~id~~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~  641 (705)
                        ..+++....+         ..  ...+......+.+++..||+++|++||++.++++.|++++.
T Consensus       236 --~~~~~~~~~~---------~~--~~~~~~~~~~~~~~i~~cl~~~P~~Rp~~~~i~~~l~~~~~  288 (290)
T cd05045         236 --ERLFNLLKTG---------YR--MERPENCSEEMYNLMLTCWKQEPDKRPTFADISKELEKMMV  288 (290)
T ss_pred             --HHHHHHHhCC---------CC--CCCCCCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHHHHh
Confidence              2222322221         11  11122334578899999999999999999999999997754

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi

>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase

Probab=100.00  E-value=6e-37  Score=316.80  Aligned_cols=246  Identities=27%  Similarity=0.419  Sum_probs=198.0

Q ss_pred             EEeecCceEEEEEEE--cCCCeEEEEEEeccCC--chhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEEEEeeCCC
Q 005257          371 VIGVGGNGKVYKGVL--EGGGAEIAVKRISHEN--DGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMEN  446 (705)
Q Consensus       371 ~LG~G~fg~Vy~~~~--~~~~~~vavK~i~~~~--~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~lV~E~~~~  446 (705)
                      .||+|+||.||+|.+  ..++..+|+|+++...  ....+++.+|+.++++++||||+++++++.  ....++||||+++
T Consensus         2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~--~~~~~lv~e~~~~   79 (257)
T cd05116           2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYIVRMIGICE--AESWMLVMELAEL   79 (257)
T ss_pred             cCCCcCCcceEEeEEecCCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhCCCCCcceEEEEEc--CCCcEEEEecCCC
Confidence            589999999999975  3567889999986543  234567899999999999999999999875  4467899999999


Q ss_pred             CChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecCCCCcce-
Q 005257          447 GSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVAS-  525 (705)
Q Consensus       447 gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~~~~~~~-  525 (705)
                      |+|.+++....   .+++..+..++.|++.||.|||+   ++++||||||+||+++.++.+||+|||+++......... 
T Consensus        80 ~~L~~~l~~~~---~~~~~~~~~i~~qi~~al~~lH~---~~i~H~dlkp~nill~~~~~~kl~Dfg~~~~~~~~~~~~~  153 (257)
T cd05116          80 GPLNKFLQKNK---HVTEKNITELVHQVSMGMKYLEE---TNFVHRDLAARNVLLVTQHYAKISDFGLSKALGADENYYK  153 (257)
T ss_pred             CcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHH---CCEeecccchhhEEEcCCCeEEECCCccccccCCCCCeee
Confidence            99999996532   58999999999999999999998   999999999999999999999999999998765433221 


Q ss_pred             -eeeeeccccCCCccccccCCCCccccEEEEehhHHHHhh-CCCCCCCCCccHHHHHHHHHHhCchhHHHHHhhhcCCCC
Q 005257          526 -TTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLS-GRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRAKGGF  603 (705)
Q Consensus       526 -~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~Ellt-G~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~l~~~~~~  603 (705)
                       .....++..|+|||.+....++.++|||||||++|||++ |+.||......   .....+..+..           ...
T Consensus       154 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~---~~~~~i~~~~~-----------~~~  219 (257)
T cd05116         154 AKTHGKWPVKWYAPECMNYYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKGN---EVTQMIESGER-----------MEC  219 (257)
T ss_pred             ecCCCCCCccccCHhHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHH---HHHHHHHCCCC-----------CCC
Confidence             111234578999999988889999999999999999998 99999764321   11122222211           122


Q ss_pred             CHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHh
Q 005257          604 DEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLEG  638 (705)
Q Consensus       604 ~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  638 (705)
                      +......+.+++.+||+.||++||++.+|.+.|++
T Consensus       220 ~~~~~~~l~~li~~~~~~~p~~Rp~~~~i~~~l~~  254 (257)
T cd05116         220 PQRCPPEMYDLMKLCWTYGVDERPGFAVVELRLRN  254 (257)
T ss_pred             CCCCCHHHHHHHHHHhccCchhCcCHHHHHHHHhc
Confidence            23345678899999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio

>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha

Probab=100.00  E-value=8.5e-37  Score=327.14  Aligned_cols=242  Identities=22%  Similarity=0.379  Sum_probs=194.8

Q ss_pred             CCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccC---CchhHHHHHHHHHHhccCC-CCCcceeeeeeeeccCceEEE
Q 005257          365 GFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHE---NDGGTRAFLAEISSLGRLK-HKSLVGLRGWCKREKGSLMLV  440 (705)
Q Consensus       365 ~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~---~~~~~~~~~~Ei~~l~~l~-Hpniv~l~g~~~~~~~~~~lV  440 (705)
                      +|+..+.||+|+||+||+|....+++.||+|++...   .....+.+..|..++..+. |++|+++.+++.. .+.+++|
T Consensus         1 ~f~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~-~~~~~lv   79 (323)
T cd05615           1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQT-VDRLYFV   79 (323)
T ss_pred             CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEec-CCEEEEE
Confidence            367789999999999999999999999999998754   2334456788999998886 4667778776655 6789999


Q ss_pred             EeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecCC
Q 005257          441 YDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGH  520 (705)
Q Consensus       441 ~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~~  520 (705)
                      |||+++|+|.+++....   .+++.++..++.|++.||.|||+   ++|+||||||+|||++.++.+||+|||+++....
T Consensus        80 ~Ey~~~g~L~~~i~~~~---~l~~~~~~~i~~qi~~al~~lH~---~~ivHrDikp~Nill~~~~~ikL~Dfg~~~~~~~  153 (323)
T cd05615          80 MEYVNGGDLMYHIQQVG---KFKEPQAVFYAAEISVGLFFLHR---RGIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMV  153 (323)
T ss_pred             EcCCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHH---CCeeccCCCHHHeEECCCCCEEEeccccccccCC
Confidence            99999999999986543   68999999999999999999998   9999999999999999999999999999875432


Q ss_pred             CCcceeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhHHHHHhhhcC
Q 005257          521 GQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRAK  600 (705)
Q Consensus       521 ~~~~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~l~~~  600 (705)
                      ... ......||+.|+|||++.+..++.++|||||||++|||++|+.||......   ...+.+..+.            
T Consensus       154 ~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~---~~~~~i~~~~------------  217 (323)
T cd05615         154 DGV-TTRTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDED---ELFQSIMEHN------------  217 (323)
T ss_pred             CCc-cccCccCCccccCHHHHcCCCCCCccchhhhHHHHHHHHhCCCCCCCCCHH---HHHHHHHhCC------------
Confidence            221 223356899999999999888999999999999999999999999765421   1111111111            


Q ss_pred             CCCCHHHHHHHHHHHHHcCCCCCCCCCCH
Q 005257          601 GGFDEDEVERVLHLGLLCAYPDPRARPTM  629 (705)
Q Consensus       601 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~  629 (705)
                      ..++......+.+++..|++.+|.+|++.
T Consensus       218 ~~~p~~~~~~~~~li~~~l~~~p~~R~~~  246 (323)
T cd05615         218 VSYPKSLSKEAVSICKGLMTKHPSKRLGC  246 (323)
T ss_pred             CCCCccCCHHHHHHHHHHcccCHhhCCCC
Confidence            12223344567889999999999999985

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a

>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta

Probab=100.00  E-value=1.3e-36  Score=326.29  Aligned_cols=241  Identities=24%  Similarity=0.334  Sum_probs=194.1

Q ss_pred             eEEeecCceEEEEEEEcCCCeEEEEEEeccCC---chhHHHHHHHHHHhccC-CCCCcceeeeeeeeccCceEEEEeeCC
Q 005257          370 NVIGVGGNGKVYKGVLEGGGAEIAVKRISHEN---DGGTRAFLAEISSLGRL-KHKSLVGLRGWCKREKGSLMLVYDYME  445 (705)
Q Consensus       370 ~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~---~~~~~~~~~Ei~~l~~l-~Hpniv~l~g~~~~~~~~~~lV~E~~~  445 (705)
                      +.||+|+||+||+|....+++.||+|+++...   ....+.+.+|+.++.++ +||||+++++++.. .+.+++||||++
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~-~~~~~lv~e~~~   79 (327)
T cd05617           1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQT-TSRLFLVIEYVN   79 (327)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEe-CCEEEEEEeCCC
Confidence            46999999999999999999999999997542   23456688999999888 69999999997765 678999999999


Q ss_pred             CCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecCCCCcce
Q 005257          446 NGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVAS  525 (705)
Q Consensus       446 ~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~~~~~~~  525 (705)
                      +|+|..++....   .+++..+..++.|++.||.|||+   ++|+||||||+|||++.++.+||+|||+++....... .
T Consensus        80 ~~~L~~~~~~~~---~l~~~~~~~~~~qi~~al~~lH~---~~ivHrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~-~  152 (327)
T cd05617          80 GGDLMFHMQRQR---KLPEEHARFYAAEICIALNFLHE---RGIIYRDLKLDNVLLDADGHIKLTDYGMCKEGLGPGD-T  152 (327)
T ss_pred             CCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHH---CCeeccCCCHHHEEEeCCCCEEEeccccceeccCCCC-c
Confidence            999998886533   68999999999999999999998   9999999999999999999999999999975332221 2


Q ss_pred             eeeeeccccCCCccccccCCCCccccEEEEehhHHHHhhCCCCCCCCCc----cHHHHHHHHHHhCchhHHHHHhhhcCC
Q 005257          526 TTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKP----NLVEMVWELMVQGKLLDALDARLRAKG  601 (705)
Q Consensus       526 ~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~----~~~~~v~~~~~~~~~~~~id~~l~~~~  601 (705)
                      .....||+.|+|||++.+..++.++|||||||++|||++|+.||.....    ...+.....+....            .
T Consensus       153 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~------------~  220 (327)
T cd05617         153 TSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIITDNPDMNTEDYLFQVILEKP------------I  220 (327)
T ss_pred             eecccCCcccCCHHHHCCCCCCchheeehhHHHHHHHHhCCCCCCccCCCcccccHHHHHHHHHhCC------------C
Confidence            2346799999999999998999999999999999999999999964211    11222222222111            1


Q ss_pred             CCCHHHHHHHHHHHHHcCCCCCCCCCCHH
Q 005257          602 GFDEDEVERVLHLGLLCAYPDPRARPTMR  630 (705)
Q Consensus       602 ~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~  630 (705)
                      ..+......+.+++..|++.||.+||++.
T Consensus       221 ~~p~~~~~~~~~li~~~L~~dP~~R~~~~  249 (327)
T cd05617         221 RIPRFLSVKASHVLKGFLNKDPKERLGCQ  249 (327)
T ss_pred             CCCCCCCHHHHHHHHHHhccCHHHcCCCC
Confidence            12223345678899999999999999853

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways

>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=1.8e-36  Score=325.68  Aligned_cols=256  Identities=24%  Similarity=0.283  Sum_probs=197.5

Q ss_pred             CCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccC---CchhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEEE
Q 005257          364 KGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHE---NDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLV  440 (705)
Q Consensus       364 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~---~~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~lV  440 (705)
                      ++|...+.||+|+||.||++....+++.||+|++...   .....+.+.+|+.++..++|+||+++++++.. ++.+++|
T Consensus         1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~-~~~~~lv   79 (331)
T cd05597           1 DDFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAFQD-ENNLYLV   79 (331)
T ss_pred             CCceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEec-CCeEEEE
Confidence            4688899999999999999999999999999998642   22345568899999999999999999998876 6789999


Q ss_pred             EeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecCC
Q 005257          441 YDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGH  520 (705)
Q Consensus       441 ~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~~  520 (705)
                      |||+++|+|.+++.+...  .+++..+..++.||+.||+|||+   ++|+||||||+|||++.++.+||+|||++.....
T Consensus        80 ~e~~~g~~L~~~l~~~~~--~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~  154 (331)
T cd05597          80 MDYYVGGDLLTLLSKFED--RLPEDMARFYLAEMVLAIDSVHQ---LGYVHRDIKPDNVLLDKNGHIRLADFGSCLRLLA  154 (331)
T ss_pred             EecCCCCcHHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHh---CCeEECCCCHHHEEECCCCCEEEEECCceeecCC
Confidence            999999999999965332  58999999999999999999998   9999999999999999999999999999976654


Q ss_pred             CCcceeeeeeccccCCCcccccc-----CCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhHHHHH
Q 005257          521 GQVASTTRVVGTVGYLAPEVFSS-----GRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDA  595 (705)
Q Consensus       521 ~~~~~~~~~~gt~~y~APE~~~~-----~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~  595 (705)
                      ..........||+.|||||++..     ..++.++|||||||++|||++|+.||.....  .+.............    
T Consensus       155 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~--~~~~~~i~~~~~~~~----  228 (331)
T cd05597         155 DGTVQSNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYAESL--VETYGKIMNHKEHFQ----  228 (331)
T ss_pred             CCCccccceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCCCCCH--HHHHHHHHcCCCccc----
Confidence            43333333579999999999863     4578899999999999999999999976432  111111111110000    


Q ss_pred             hhhcCCCCCHHHHHHHHHHHHHcC--CCCCCCCCCHHHHHHH
Q 005257          596 RLRAKGGFDEDEVERVLHLGLLCA--YPDPRARPTMRQVVKV  635 (705)
Q Consensus       596 ~l~~~~~~~~~~~~~l~~l~~~Cl--~~dP~~RPs~~evl~~  635 (705)
                       +   ..........+.+++..|+  ..++..||++.+++++
T Consensus       229 -~---~~~~~~~~~~~~~li~~ll~~~~~r~~r~~~~~~l~h  266 (331)
T cd05597         229 -F---PPDVTDVSEEAKDLIRRLICSPETRLGRNGLQDFKDH  266 (331)
T ss_pred             -C---CCccCCCCHHHHHHHHHHccCcccccCCCCHHHHhcC
Confidence             0   0001112344566666654  4445558899988876

Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,

>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

Probab=100.00  E-value=1.1e-36  Score=314.35  Aligned_cols=249  Identities=31%  Similarity=0.438  Sum_probs=202.3

Q ss_pred             CCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCCchhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEEEEee
Q 005257          364 KGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDY  443 (705)
Q Consensus       364 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~lV~E~  443 (705)
                      ++|...+.||+|+||.||++...  +..+|+|.++..  ...+.+.+|+.++++++|+|++++++++...++..++|+||
T Consensus         6 ~~~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~--~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e~   81 (256)
T cd05082           6 KELKLLQTIGKGEFGDVMLGDYR--GNKVAVKCIKND--ATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEY   81 (256)
T ss_pred             HhCeeeeeecccCCCeEEEEEEc--CCcEEEEEeCCC--chHHHHHHHHHHHHhCCCCCeeeEEEEEEcCCCceEEEEEC
Confidence            46778899999999999999875  678999988643  33567899999999999999999999876656788999999


Q ss_pred             CCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecCCCCc
Q 005257          444 MENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQV  523 (705)
Q Consensus       444 ~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~~~~~  523 (705)
                      +++++|.+++.+... ..+++..+..++.|++.||+|||+   ++++||||||+||++++++.+||+|||+++.......
T Consensus        82 ~~~~~L~~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~  157 (256)
T cd05082          82 MAKGSLVDYLRSRGR-SVLGGDCLLKFSLDVCEAMEYLEA---NNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQD  157 (256)
T ss_pred             CCCCcHHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHh---CCEeccccchheEEEcCCCcEEecCCccceeccccCC
Confidence            999999999976443 258999999999999999999998   9999999999999999999999999999876433221


Q ss_pred             ceeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhh-CCCCCCCCCccHHHHHHHHHHhCchhHHHHHhhhcCCC
Q 005257          524 ASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLS-GRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRAKGG  602 (705)
Q Consensus       524 ~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~Ellt-G~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~l~~~~~  602 (705)
                          ...++..|+|||++.+..++.++|||||||++|||++ |+.||.....  .+. ...+..+         ..  ..
T Consensus       158 ----~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~~~--~~~-~~~~~~~---------~~--~~  219 (256)
T cd05082         158 ----TGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPL--KDV-VPRVEKG---------YK--MD  219 (256)
T ss_pred             ----CCccceeecCHHHHccCCCCchhhhHHHHHHHHHHHhCCCCCCCCCCH--HHH-HHHHhcC---------CC--CC
Confidence                2234668999999988889999999999999999997 9999865332  111 1111111         11  11


Q ss_pred             CCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHh
Q 005257          603 FDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLEG  638 (705)
Q Consensus       603 ~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  638 (705)
                      ........+.+++.+||+.+|++|||+.++++.|+.
T Consensus       220 ~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~  255 (256)
T cd05082         220 APDGCPPVVYDVMKQCWHLDAATRPSFLQLREQLEH  255 (256)
T ss_pred             CCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHhc
Confidence            223345678899999999999999999999999874

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re

>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

Probab=100.00  E-value=5.1e-37  Score=318.82  Aligned_cols=255  Identities=25%  Similarity=0.356  Sum_probs=203.3

Q ss_pred             CCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCCchhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEEEEee
Q 005257          364 KGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDY  443 (705)
Q Consensus       364 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~lV~E~  443 (705)
                      ++|...+.||+|+||.||+|....+++.||+|++..........+.+|+.++.+++||||+++++.+.. ++..++||||
T Consensus         9 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~~e~~~l~~~~h~~ii~~~~~~~~-~~~~~iv~e~   87 (267)
T cd06646           9 HDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPGDDFSLIQQEIFMVKECKHCNIVAYFGSYLS-REKLWICMEY   87 (267)
T ss_pred             hhcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCccchHHHHHHHHHHHHhcCCCCeeeeeEEEEe-CCEEEEEEeC
Confidence            468889999999999999999988899999999976655556678899999999999999999998876 6788999999


Q ss_pred             CCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecCCCCc
Q 005257          444 MENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQV  523 (705)
Q Consensus       444 ~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~~~~~  523 (705)
                      +++++|.+++....   .+++.++..++.|++.||.|||+   .+|+||||||+||+++.++.+||+|||+++.......
T Consensus        88 ~~~~~L~~~~~~~~---~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~~  161 (267)
T cd06646          88 CGGGSLQDIYHVTG---PLSELQIAYVCRETLQGLAYLHS---KGKMHRDIKGANILLTDNGDVKLADFGVAAKITATIA  161 (267)
T ss_pred             CCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHH---CCccccCCCHHHEEECCCCCEEECcCccceeeccccc
Confidence            99999999986533   68999999999999999999998   9999999999999999999999999999986643221


Q ss_pred             ceeeeeeccccCCCccccc---cCCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhHHHHHhhhcC
Q 005257          524 ASTTRVVGTVGYLAPEVFS---SGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRAK  600 (705)
Q Consensus       524 ~~~~~~~gt~~y~APE~~~---~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~l~~~  600 (705)
                       ......|++.|+|||.+.   ...++.++|||||||++|||++|+.||....+.  +... .+......   .+...  
T Consensus       162 -~~~~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~~--~~~~-~~~~~~~~---~~~~~--  232 (267)
T cd06646         162 -KRKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLHPM--RALF-LMSKSNFQ---PPKLK--  232 (267)
T ss_pred             -ccCccccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCccccchh--hhhe-eeecCCCC---CCCCc--
Confidence             122346889999999884   345788999999999999999999998643321  0000 00000000   00000  


Q ss_pred             CCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Q 005257          601 GGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVL  636 (705)
Q Consensus       601 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L  636 (705)
                        ........+.+++..||+.+|++||++.++++.|
T Consensus       233 --~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~l  266 (267)
T cd06646         233 --DKTKWSSTFHNFVKISLTKNPKKRPTAERLLTHL  266 (267)
T ss_pred             --cccccCHHHHHHHHHHhhCChhhCcCHHHHhcCC
Confidence              0112345788999999999999999999998754

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2

Probab=100.00  E-value=7.8e-37  Score=330.19  Aligned_cols=263  Identities=25%  Similarity=0.388  Sum_probs=205.9

Q ss_pred             hCCCCcceEEeecCceEEEEEEEc-----CCCeEEEEEEeccCC-chhHHHHHHHHHHhccC-CCCCcceeeeeeeeccC
Q 005257          363 TKGFSEENVIGVGGNGKVYKGVLE-----GGGAEIAVKRISHEN-DGGTRAFLAEISSLGRL-KHKSLVGLRGWCKREKG  435 (705)
Q Consensus       363 t~~f~~~~~LG~G~fg~Vy~~~~~-----~~~~~vavK~i~~~~-~~~~~~~~~Ei~~l~~l-~Hpniv~l~g~~~~~~~  435 (705)
                      .++|+..+.||+|+||.||+|.+.     .+++.||||+++... ....+.+.+|+.++.++ +||||++++++|...+.
T Consensus         6 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~   85 (343)
T cd05103           6 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGG   85 (343)
T ss_pred             hhHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCCChHHHHHHHHHHHHHHhccCCccHhhhcceeecCCC
Confidence            357888999999999999999853     356789999997543 33456788999999999 68999999998877667


Q ss_pred             ceEEEEeeCCCCChhHHHHhcCC---------------------------------------------------------
Q 005257          436 SLMLVYDYMENGSLDKWIFQCDG---------------------------------------------------------  458 (705)
Q Consensus       436 ~~~lV~E~~~~gsL~~~L~~~~~---------------------------------------------------------  458 (705)
                      ..++||||+++|+|.+++.....                                                         
T Consensus        86 ~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  165 (343)
T cd05103          86 PLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEE  165 (343)
T ss_pred             ceEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCccccchhhh
Confidence            78999999999999999865321                                                         


Q ss_pred             -------CCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecCCCCc-ceeeeee
Q 005257          459 -------SMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQV-ASTTRVV  530 (705)
Q Consensus       459 -------~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~~~~~-~~~~~~~  530 (705)
                             ...+++.++.+++.|++.||.|||+   ++|+||||||+|||++.++.+||+|||+++....... .......
T Consensus       166 ~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~---~~i~H~dikp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~  242 (343)
T cd05103         166 AEQEDLYKKVLTLEDLICYSFQVAKGMEFLAS---RKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDAR  242 (343)
T ss_pred             hhhhhhhhccCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCccCeEEEcCCCcEEEEecccccccccCcchhhcCCCC
Confidence                   1247888999999999999999998   9999999999999999999999999999976532211 1111234


Q ss_pred             ccccCCCccccccCCCCccccEEEEehhHHHHhh-CCCCCCCCCccHHHHHHHHHHhCchhHHHHHhhhcCCCCCHHHHH
Q 005257          531 GTVGYLAPEVFSSGRASTQTDVFGFGILILEVLS-GRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRAKGGFDEDEVE  609 (705)
Q Consensus       531 gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~Ellt-G~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~l~~~~~~~~~~~~  609 (705)
                      ++..|+|||.+.+..++.++|||||||++|||++ |..||......  ......+..+..           ...+.....
T Consensus       243 ~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~--~~~~~~~~~~~~-----------~~~~~~~~~  309 (343)
T cd05103         243 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID--EEFCRRLKEGTR-----------MRAPDYTTP  309 (343)
T ss_pred             CCcceECcHHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCcccc--HHHHHHHhccCC-----------CCCCCCCCH
Confidence            5678999999988889999999999999999997 99998754321  111122222211           001111234


Q ss_pred             HHHHHHHHcCCCCCCCCCCHHHHHHHHHhccc
Q 005257          610 RVLHLGLLCAYPDPRARPTMRQVVKVLEGKIE  641 (705)
Q Consensus       610 ~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~  641 (705)
                      .+.+++..||+.+|++||++.++++.|+...+
T Consensus       310 ~~~~~~~~cl~~~p~~Rps~~eil~~l~~~~~  341 (343)
T cd05103         310 EMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ  341 (343)
T ss_pred             HHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence            67899999999999999999999999987665

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp

>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

Probab=100.00  E-value=1.1e-36  Score=315.12  Aligned_cols=254  Identities=28%  Similarity=0.497  Sum_probs=204.8

Q ss_pred             hCCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCCchhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEEEEe
Q 005257          363 TKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYD  442 (705)
Q Consensus       363 t~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~lV~E  442 (705)
                      .++|+..++||+|+||.||+|... +++.||+|.+.... ....++.+|+.++++++|||++++++++.  .+..+++||
T Consensus         5 ~~~~~~~~~ig~G~~g~v~~~~~~-~~~~~a~K~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~--~~~~~~v~e   80 (260)
T cd05067           5 RETLKLVKKLGAGQFGEVWMGYYN-GHTKVAIKSLKQGS-MSPEAFLAEANLMKQLQHPRLVRLYAVVT--QEPIYIITE   80 (260)
T ss_pred             hHHceeeeeeccCccceEEeeecC-CCceEEEEEecCCC-CcHHHHHHHHHHHHhcCCcCeeeEEEEEc--cCCcEEEEE
Confidence            456888999999999999999876 46789999986443 34568999999999999999999998764  456899999


Q ss_pred             eCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecCCCC
Q 005257          443 YMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQ  522 (705)
Q Consensus       443 ~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~~~~  522 (705)
                      |+++++|.+++..... ..+++.++..++.|++.||.|||+   .+++||||||+||++++++.++|+|||++.......
T Consensus        81 ~~~~~~L~~~~~~~~~-~~~~~~~~~~i~~~i~~al~~LH~---~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~  156 (260)
T cd05067          81 YMENGSLVDFLKTPEG-IKLTINKLIDMAAQIAEGMAFIER---KNYIHRDLRAANILVSETLCCKIADFGLARLIEDNE  156 (260)
T ss_pred             cCCCCCHHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHhc---CCeecccccHHhEEEcCCCCEEEccCcceeecCCCC
Confidence            9999999999876443 368999999999999999999998   999999999999999999999999999998765333


Q ss_pred             cceeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhh-CCCCCCCCCccHHHHHHHHHHhCchhHHHHHhhhcCC
Q 005257          523 VASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLS-GRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRAKG  601 (705)
Q Consensus       523 ~~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~Ellt-G~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~l~~~~  601 (705)
                      ........++..|+|||++....++.++||||||+++|||++ |+.||......  + ....+..+         ..  .
T Consensus       157 ~~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~--~-~~~~~~~~---------~~--~  222 (260)
T cd05067         157 YTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTYGRIPYPGMTNP--E-VIQNLERG---------YR--M  222 (260)
T ss_pred             cccccCCcccccccCHHHhccCCcCcccchHHHHHHHHHHHhCCCCCCCCCChH--H-HHHHHHcC---------CC--C
Confidence            222222345678999999988889999999999999999999 99999754321  1 11111111         11  1


Q ss_pred             CCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHh
Q 005257          602 GFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLEG  638 (705)
Q Consensus       602 ~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  638 (705)
                      ..+......+.+++.+||+.+|++||++++++..|+.
T Consensus       223 ~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~  259 (260)
T cd05067         223 PRPDNCPEELYELMRLCWKEKPEERPTFEYLRSVLED  259 (260)
T ss_pred             CCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHhhc
Confidence            1122234578999999999999999999999999873

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr

>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

Probab=100.00  E-value=1e-36  Score=319.11  Aligned_cols=245  Identities=28%  Similarity=0.406  Sum_probs=195.0

Q ss_pred             EeecCceEEEEEEEcCCCeEEEEEEeccCC---chhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEEEEeeCCCCC
Q 005257          372 IGVGGNGKVYKGVLEGGGAEIAVKRISHEN---DGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGS  448 (705)
Q Consensus       372 LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~---~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~lV~E~~~~gs  448 (705)
                      ||+|+||.||++..+.+++.+|+|++....   ....+.+..|++++++++||||+++.+++.. +...++||||+++++
T Consensus         1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~~~-~~~~~lv~e~~~g~~   79 (277)
T cd05607           1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAFES-KTHLCLVMSLMNGGD   79 (277)
T ss_pred             CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEEec-CCeEEEEEecCCCCC
Confidence            699999999999999999999999986431   2233456679999999999999999998765 678999999999999


Q ss_pred             hhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecCCCCcceeee
Q 005257          449 LDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTR  528 (705)
Q Consensus       449 L~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~~~~~~~~~~  528 (705)
                      |.+++..... ..+++..+..++.|++.||.|||+   .+++||||||+||+++.++.++|+|||++.......  ....
T Consensus        80 L~~~~~~~~~-~~~~~~~~~~~~~qi~~al~~lH~---~~ivH~dikp~Nili~~~~~~~l~Dfg~~~~~~~~~--~~~~  153 (277)
T cd05607          80 LKYHIYNVGE-RGLEMERVIHYSAQITCGILHLHS---MDIVYRDMKPENVLLDDQGNCRLSDLGLAVELKDGK--TITQ  153 (277)
T ss_pred             HHHHHHhccc-cCCCHHHHHHHHHHHHHHHHHHHH---CCEEEccCChHhEEEcCCCCEEEeeceeeeecCCCc--eeec
Confidence            9998865433 258999999999999999999998   999999999999999999999999999998765432  2233


Q ss_pred             eeccccCCCccccccCCCCccccEEEEehhHHHHhhCCCCCCCCCccHH-HHHHHHHHhCchhHHHHHhhhcCCCCCHHH
Q 005257          529 VVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLV-EMVWELMVQGKLLDALDARLRAKGGFDEDE  607 (705)
Q Consensus       529 ~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~-~~v~~~~~~~~~~~~id~~l~~~~~~~~~~  607 (705)
                      ..|+..|+|||++.+..++.++||||+||++|||++|+.||........ ..+........        ..   ......
T Consensus       154 ~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~--------~~---~~~~~~  222 (277)
T cd05607         154 RAGTNGYMAPEILKEEPYSYPVDWFAMGCSIYEMVAGRTPFKDHKEKVAKEELKRRTLEDE--------VK---FEHQNF  222 (277)
T ss_pred             cCCCCCccCHHHHccCCCCCchhHHHHHHHHHHHHhCCCCCCCCcchhhHHHHHHHhhccc--------cc---cccccC
Confidence            4689999999999888899999999999999999999999975432111 11111111110        00   001123


Q ss_pred             HHHHHHHHHHcCCCCCCCCCCHHHHHH
Q 005257          608 VERVLHLGLLCAYPDPRARPTMRQVVK  634 (705)
Q Consensus       608 ~~~l~~l~~~Cl~~dP~~RPs~~evl~  634 (705)
                      ...+.+++..||+.||++||+++|+++
T Consensus       223 ~~~~~~li~~~L~~~P~~R~~~~~~~~  249 (277)
T cd05607         223 TEESKDICRLFLAKKPEDRLGSREKND  249 (277)
T ss_pred             CHHHHHHHHHHhccCHhhCCCCccchh
Confidence            456789999999999999999987664

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr

>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors

Probab=100.00  E-value=1.2e-36  Score=320.94  Aligned_cols=264  Identities=25%  Similarity=0.371  Sum_probs=205.0

Q ss_pred             hCCCCcceEEeecCceEEEEEEEcCCC----------------eEEEEEEeccCC-chhHHHHHHHHHHhccCCCCCcce
Q 005257          363 TKGFSEENVIGVGGNGKVYKGVLEGGG----------------AEIAVKRISHEN-DGGTRAFLAEISSLGRLKHKSLVG  425 (705)
Q Consensus       363 t~~f~~~~~LG~G~fg~Vy~~~~~~~~----------------~~vavK~i~~~~-~~~~~~~~~Ei~~l~~l~Hpniv~  425 (705)
                      .++|+..+.||+|+||.||++.+...+                ..||+|.+.... ....+.+.+|++++++++||||++
T Consensus         4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~   83 (296)
T cd05051           4 RQPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAREDFLKEVKILSRLSDPNIAR   83 (296)
T ss_pred             hhhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCHHHHHHHHHHHHHHHhcCCCCEeE
Confidence            356888999999999999999876533                568999987553 345678899999999999999999


Q ss_pred             eeeeeeeccCceEEEEeeCCCCChhHHHHhcCC--------CCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCC
Q 005257          426 LRGWCKREKGSLMLVYDYMENGSLDKWIFQCDG--------SMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSS  497 (705)
Q Consensus       426 l~g~~~~~~~~~~lV~E~~~~gsL~~~L~~~~~--------~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~  497 (705)
                      ++++|.. ++..++++||+++++|.+++.....        ...+++..++.++.|++.||.|||+   .+++||||||+
T Consensus        84 ~~~~~~~-~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~---~~i~H~dlkp~  159 (296)
T cd05051          84 LLGVCTV-DPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLES---LNFVHRDLATR  159 (296)
T ss_pred             EEEEEec-CCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHH---cCccccccchh
Confidence            9998876 5788999999999999999976431        1258999999999999999999998   99999999999


Q ss_pred             CeEEccCCCeeeeeeccceecCCCCcc-eeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhh--CCCCCCCCCc
Q 005257          498 NVLLDKEMNGRLGDFGLARMHGHGQVA-STTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLS--GRRPIEEGKP  574 (705)
Q Consensus       498 NILld~~~~~kL~DFGla~~~~~~~~~-~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~Ellt--G~~Pf~~~~~  574 (705)
                      ||+++.++.++|+|||+++........ ......++..|+|||.+.+..++.++|||||||++|||++  |..||.....
T Consensus       160 Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~~  239 (296)
T cd05051         160 NCLVGKNYTIKIADFGMSRNLYSSDYYRVQGRAPLPIRWMAWESVLLGKFTTKSDVWAFGVTLWEILTLCREQPYEHLTD  239 (296)
T ss_pred             ceeecCCCceEEccccceeecccCcceeecCcCCCCceecCHHHhhcCCCCccchhhhhHHHHHHHHhcCCCCCCCCcCh
Confidence            999999999999999999865433221 1223456788999999988889999999999999999998  6777765332


Q ss_pred             cHHHHHHHHHHhCchhHHHHHhhhcCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHH
Q 005257          575 NLVEMVWELMVQGKLLDALDARLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLE  637 (705)
Q Consensus       575 ~~~~~v~~~~~~~~~~~~id~~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  637 (705)
                         ...+......  .........  ...+......+.+++.+||+.||++||++.|+++.|+
T Consensus       240 ---~~~~~~~~~~--~~~~~~~~~--~~~~~~~~~~l~~li~~cl~~~p~~Rpt~~el~~~L~  295 (296)
T cd05051         240 ---QQVIENAGHF--FRDDGRQIY--LPRPPNCPKDIYELMLECWRRDEEDRPTFREIHLFLQ  295 (296)
T ss_pred             ---HHHHHHHHhc--ccccccccc--CCCccCCCHHHHHHHHHHhccChhcCCCHHHHHHHhc
Confidence               1111111110  000000000  1112223467899999999999999999999999886

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke

>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2

Probab=100.00  E-value=5.9e-37  Score=321.33  Aligned_cols=254  Identities=24%  Similarity=0.397  Sum_probs=202.6

Q ss_pred             CCcceEEeecCceEEEEEEEcCC-----CeEEEEEEeccCCch-hHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEE
Q 005257          366 FSEENVIGVGGNGKVYKGVLEGG-----GAEIAVKRISHENDG-GTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLML  439 (705)
Q Consensus       366 f~~~~~LG~G~fg~Vy~~~~~~~-----~~~vavK~i~~~~~~-~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~l  439 (705)
                      |...+.||+|+||.||+|....+     +..||||+++..... ..+.+.+|+.++..++||||+++++++.. ....++
T Consensus         7 ~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~-~~~~~~   85 (283)
T cd05091           7 VRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSRLQHPNIVCLLGVVTK-EQPLSM   85 (283)
T ss_pred             HHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcC-CCceEE
Confidence            55677899999999999987543     578999999755433 34668899999999999999999999876 567899


Q ss_pred             EEeeCCCCChhHHHHhcC-------------CCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCC
Q 005257          440 VYDYMENGSLDKWIFQCD-------------GSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMN  506 (705)
Q Consensus       440 V~E~~~~gsL~~~L~~~~-------------~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~  506 (705)
                      ++||+++++|.+++....             ....+++..+..++.|++.||.|||+   .+++||||||+||++++++.
T Consensus        86 ~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~---~gi~H~dlkp~Nil~~~~~~  162 (283)
T cd05091          86 IFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSS---HHVVHKDLATRNVLVFDKLN  162 (283)
T ss_pred             EEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHH---cCccccccchhheEecCCCc
Confidence            999999999999985321             12258889999999999999999998   99999999999999999999


Q ss_pred             eeeeeeccceecCCCCcc-eeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhh-CCCCCCCCCccHHHHHHHHH
Q 005257          507 GRLGDFGLARMHGHGQVA-STTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLS-GRRPIEEGKPNLVEMVWELM  584 (705)
Q Consensus       507 ~kL~DFGla~~~~~~~~~-~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~Ellt-G~~Pf~~~~~~~~~~v~~~~  584 (705)
                      +||+|||+++........ ......+++.|+|||.+.++.++.++|||||||++|||++ |..||.....   ....+.+
T Consensus       163 ~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~---~~~~~~i  239 (283)
T cd05091         163 VKISDLGLFREVYAADYYKLMGNSLLPIRWMSPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSN---QDVIEMI  239 (283)
T ss_pred             eEecccccccccccchheeeccCccCCccccCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCH---HHHHHHH
Confidence            999999998865433221 1222345778999999988889999999999999999998 8888865432   1122222


Q ss_pred             HhCchhHHHHHhhhcCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHH
Q 005257          585 VQGKLLDALDARLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLE  637 (705)
Q Consensus       585 ~~~~~~~~id~~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  637 (705)
                      ..+..           ...+.+....+.+++..||+.+|++||++.++++.|+
T Consensus       240 ~~~~~-----------~~~~~~~~~~~~~li~~cl~~~p~~RP~~~~i~~~l~  281 (283)
T cd05091         240 RNRQV-----------LPCPDDCPAWVYTLMLECWNEFPSRRPRFKDIHSRLR  281 (283)
T ss_pred             HcCCc-----------CCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHhh
Confidence            22211           1223345567889999999999999999999999886

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa

Probab=100.00  E-value=1.8e-36  Score=313.51  Aligned_cols=247  Identities=25%  Similarity=0.413  Sum_probs=198.1

Q ss_pred             EEeecCceEEEEEEEc--CCCeEEEEEEeccCCc-hhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEEEEeeCCCC
Q 005257          371 VIGVGGNGKVYKGVLE--GGGAEIAVKRISHEND-GGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENG  447 (705)
Q Consensus       371 ~LG~G~fg~Vy~~~~~--~~~~~vavK~i~~~~~-~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~lV~E~~~~g  447 (705)
                      .||+|+||.||+|.+.  +.+..||+|++..... ...+.+.+|+.++++++||||++++++|.  ....++||||++++
T Consensus         2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~--~~~~~lv~e~~~~~   79 (257)
T cd05115           2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENEKSVRDEMMREAEIMHQLDNPYIVRMIGVCE--AEALMLVMEMASGG   79 (257)
T ss_pred             ccCCCCcccEEEEEEecCCCceeEEEEEcccccChHHHHHHHHHHHHHHhcCCCCeEEEEEEEc--CCCeEEEEEeCCCC
Confidence            3899999999999875  4456799999876543 33467899999999999999999999875  45789999999999


Q ss_pred             ChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecCCCCccee-
Q 005257          448 SLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVAST-  526 (705)
Q Consensus       448 sL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~~~~~~~~-  526 (705)
                      +|.+++.....  .+++.++.+++.|++.||.|||+   ++++||||||+||+++.++.+||+|||+++.......... 
T Consensus        80 ~L~~~l~~~~~--~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~  154 (257)
T cd05115          80 PLNKFLSGKKD--EITVSNVVELMHQVSMGMKYLEG---KNFVHRDLAARNVLLVNQHYAKISDFGLSKALGADDSYYKA  154 (257)
T ss_pred             CHHHHHHhCCC--CCCHHHHHHHHHHHHHHHHHHHh---cCeeecccchheEEEcCCCcEEeccCCccccccCCccceec
Confidence            99999875332  68999999999999999999998   9999999999999999999999999999986543322111 


Q ss_pred             -eeeeccccCCCccccccCCCCccccEEEEehhHHHHhh-CCCCCCCCCccHHHHHHHHHHhCchhHHHHHhhhcCCCCC
Q 005257          527 -TRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLS-GRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRAKGGFD  604 (705)
Q Consensus       527 -~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~Ellt-G~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~l~~~~~~~  604 (705)
                       ....++..|+|||.+.+..++.++|||||||++|||++ |..||......   .+...+..+..           ...+
T Consensus       155 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~---~~~~~~~~~~~-----------~~~~  220 (257)
T cd05115         155 RSAGKWPLKWYAPECINFRKFSSRSDVWSYGITMWEAFSYGQKPYKKMKGP---EVMSFIEQGKR-----------LDCP  220 (257)
T ss_pred             cCCCCCCcccCCHHHHccCCCCchhhHHHHHHHHHHHhcCCCCCcCcCCHH---HHHHHHHCCCC-----------CCCC
Confidence             11223578999999988889999999999999999996 99999764321   11222222211           1223


Q ss_pred             HHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHh
Q 005257          605 EDEVERVLHLGLLCAYPDPRARPTMRQVVKVLEG  638 (705)
Q Consensus       605 ~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  638 (705)
                      ..+...+.+++..||+.+|++||++.+|.+.|+.
T Consensus       221 ~~~~~~l~~li~~c~~~~~~~Rp~~~~i~~~l~~  254 (257)
T cd05115         221 AECPPEMYALMKDCWIYKWEDRPNFAKVEERMRT  254 (257)
T ss_pred             CCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHhh
Confidence            3445678899999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho

>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes

Probab=100.00  E-value=1.2e-36  Score=315.05  Aligned_cols=253  Identities=27%  Similarity=0.463  Sum_probs=202.9

Q ss_pred             CCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCCchhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEEEEee
Q 005257          364 KGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDY  443 (705)
Q Consensus       364 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~lV~E~  443 (705)
                      ++|...+.||+|++|.||+|.+..+ ..+|+|++.... ...+.+.+|++++++++|||++++++++.  .+..+++|||
T Consensus         6 ~~~~~~~~ig~g~~~~v~~~~~~~~-~~~~lK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~--~~~~~~v~e~   81 (260)
T cd05069           6 ESLRLDVKLGQGCFGEVWMGTWNGT-TKVAIKTLKPGT-MMPEAFLQEAQIMKKLRHDKLVPLYAVVS--EEPIYIVTEF   81 (260)
T ss_pred             HHeeeeeeecCcCCCeEEEEEEcCC-ceEEEEEcccCC-ccHHHHHHHHHHHHhCCCCCeeeEEEEEc--CCCcEEEEEc
Confidence            4577888999999999999998754 469999875432 34567899999999999999999998774  4567899999


Q ss_pred             CCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecCCCCc
Q 005257          444 MENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQV  523 (705)
Q Consensus       444 ~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~~~~~  523 (705)
                      +++++|.+++..... ..+++..+..++.|++.||.|||+   .+++|+||||+||++++++.+||+|||+++.......
T Consensus        82 ~~~~~L~~~~~~~~~-~~~~~~~~~~~~~~l~~al~~lH~---~~i~H~dl~~~Nill~~~~~~~l~dfg~~~~~~~~~~  157 (260)
T cd05069          82 MGKGSLLDFLKEGDG-KYLKLPQLVDMAAQIADGMAYIER---MNYIHRDLRAANILVGDNLVCKIADFGLARLIEDNEY  157 (260)
T ss_pred             CCCCCHHHHHhhCCC-CCCCHHHHHHHHHHHHHHHHHHHh---CCEeecccCcceEEEcCCCeEEECCCccceEccCCcc
Confidence            999999999976433 258999999999999999999998   9999999999999999999999999999987644332


Q ss_pred             ceeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhh-CCCCCCCCCccHHHHHHHHHHhCchhHHHHHhhhcCCC
Q 005257          524 ASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLS-GRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRAKGG  602 (705)
Q Consensus       524 ~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~Ellt-G~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~l~~~~~  602 (705)
                      .......++..|+|||...+..++.++|||||||++|||++ |+.||......   .....+..+         ..  ..
T Consensus       158 ~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~---~~~~~~~~~---------~~--~~  223 (260)
T cd05069         158 TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMVNR---EVLEQVERG---------YR--MP  223 (260)
T ss_pred             cccCCCccchhhCCHHHhccCCcChHHHHHHHHHHHHHHHhCCCCCCCCCCHH---HHHHHHHcC---------CC--CC
Confidence            22222345678999999988889999999999999999999 89998764321   111111111         00  11


Q ss_pred             CCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHh
Q 005257          603 FDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLEG  638 (705)
Q Consensus       603 ~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  638 (705)
                      .+......+.+++.+||++||++||+++++++.|+.
T Consensus       224 ~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~  259 (260)
T cd05069         224 CPQGCPESLHELMKLCWKKDPDERPTFEYIQSFLED  259 (260)
T ss_pred             CCcccCHHHHHHHHHHccCCcccCcCHHHHHHHHhc
Confidence            223445678999999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an

>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2

Probab=100.00  E-value=9.3e-37  Score=323.73  Aligned_cols=258  Identities=28%  Similarity=0.454  Sum_probs=202.7

Q ss_pred             CCCCcceEEeecCceEEEEEEEcCCCe--EEEEEEeccCC-chhHHHHHHHHHHhccC-CCCCcceeeeeeeeccCceEE
Q 005257          364 KGFSEENVIGVGGNGKVYKGVLEGGGA--EIAVKRISHEN-DGGTRAFLAEISSLGRL-KHKSLVGLRGWCKREKGSLML  439 (705)
Q Consensus       364 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~--~vavK~i~~~~-~~~~~~~~~Ei~~l~~l-~Hpniv~l~g~~~~~~~~~~l  439 (705)
                      ++|+..+.||+|+||.||+|.+..++.  .+|+|.++... ....+.+.+|++++.++ +||||+++++++.. ++..++
T Consensus         7 ~~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~-~~~~~l   85 (303)
T cd05088           7 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEH-RGYLYL   85 (303)
T ss_pred             hhceeeeeecCCCCceEEEEEEccCCceeeEEEEEecccCCHHHHHHHHHHHHHHHHhcCCCCcceEEEEECC-CCCceE
Confidence            467888999999999999999876664  46888776432 34456788999999999 89999999998876 668999


Q ss_pred             EEeeCCCCChhHHHHhcCC-------------CCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCC
Q 005257          440 VYDYMENGSLDKWIFQCDG-------------SMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMN  506 (705)
Q Consensus       440 V~E~~~~gsL~~~L~~~~~-------------~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~  506 (705)
                      ||||+++++|.+++.....             ...+++.+++.++.|++.||+|||+   ++++||||||+|||+++++.
T Consensus        86 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~---~gi~H~dlkp~Nili~~~~~  162 (303)
T cd05088          86 AIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQ---KQFIHRDLAARNILVGENYV  162 (303)
T ss_pred             EEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHh---CCccccccchheEEecCCCc
Confidence            9999999999999975421             1258899999999999999999998   99999999999999999999


Q ss_pred             eeeeeeccceecCCCCcceeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhh-CCCCCCCCCccHHHHHHHHHH
Q 005257          507 GRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLS-GRRPIEEGKPNLVEMVWELMV  585 (705)
Q Consensus       507 ~kL~DFGla~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~Ellt-G~~Pf~~~~~~~~~~v~~~~~  585 (705)
                      +||+|||+++......  ......++..|+|||++.+..++.++|||||||++|||++ |..||......  + ......
T Consensus       163 ~kl~dfg~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~--~-~~~~~~  237 (303)
T cd05088         163 AKIADFGLSRGQEVYV--KKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCA--E-LYEKLP  237 (303)
T ss_pred             EEeCccccCcccchhh--hcccCCCcccccCHHHHhccCCcccccchhhhhHHHHHHhcCCCCcccCChH--H-HHHHHh
Confidence            9999999986432111  1111234667999999988889999999999999999998 99999654321  1 111111


Q ss_pred             hCchhHHHHHhhhcCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHhccc
Q 005257          586 QGKLLDALDARLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLEGKIE  641 (705)
Q Consensus       586 ~~~~~~~id~~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~  641 (705)
                      .+         ..  ...+......+.+++.+||+.+|++||++.++++.|+...+
T Consensus       238 ~~---------~~--~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~l~~~~~  282 (303)
T cd05088         238 QG---------YR--LEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLE  282 (303)
T ss_pred             cC---------Cc--CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence            11         11  11112234567899999999999999999999999986654

Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A

>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

Probab=100.00  E-value=1.7e-36  Score=318.77  Aligned_cols=250  Identities=28%  Similarity=0.403  Sum_probs=200.3

Q ss_pred             CCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCC---chhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEEEEe
Q 005257          366 FSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHEN---DGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYD  442 (705)
Q Consensus       366 f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~---~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~lV~E  442 (705)
                      |+..+.||+|+||+||+|.+..+++.+|+|.+....   ......+.+|++++++++|+|++++.+.+.. ++..++|||
T Consensus         2 ~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~-~~~~~lv~e   80 (285)
T cd05632           2 FRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAYET-KDALCLVLT   80 (285)
T ss_pred             ceEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEEec-CCEEEEEEE
Confidence            667789999999999999999899999999986542   2233557889999999999999999988776 668999999


Q ss_pred             eCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecCCCC
Q 005257          443 YMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQ  522 (705)
Q Consensus       443 ~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~~~~  522 (705)
                      |+++++|.+++..... ..+++..+..++.|++.||.|||+   .+|+||||||+||++++++.+||+|||++.......
T Consensus        81 ~~~~~~L~~~~~~~~~-~~~~~~~~~~~~~ql~~~l~~lH~---~~iiH~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~  156 (285)
T cd05632          81 IMNGGDLKFHIYNMGN-PGFEEERALFYAAEILCGLEDLHR---ENTVYRDLKPENILLDDYGHIRISDLGLAVKIPEGE  156 (285)
T ss_pred             eccCccHHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHh---CCeeecCCCHHHEEECCCCCEEEecCCcceecCCCC
Confidence            9999999998876433 269999999999999999999998   999999999999999999999999999997654322


Q ss_pred             cceeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhhCCCCCCCCCccHH-HHHHHHHHhCchhHHHHHhhhcCC
Q 005257          523 VASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLV-EMVWELMVQGKLLDALDARLRAKG  601 (705)
Q Consensus       523 ~~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~-~~v~~~~~~~~~~~~id~~l~~~~  601 (705)
                      .  .....|+..|+|||++.+..++.++|||||||++|||++|+.||........ +.+......+            ..
T Consensus       157 ~--~~~~~g~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~P~~~~~~~~~~~~~~~~~~~~------------~~  222 (285)
T cd05632         157 S--IRGRVGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQSPFRGRKEKVKREEVDRRVLET------------EE  222 (285)
T ss_pred             c--ccCCCCCcCccChHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhhcc------------cc
Confidence            1  1234789999999999888899999999999999999999999976543211 1111111110            01


Q ss_pred             CCCHHHHHHHHHHHHHcCCCCCCCCCC-----HHHHHH
Q 005257          602 GFDEDEVERVLHLGLLCAYPDPRARPT-----MRQVVK  634 (705)
Q Consensus       602 ~~~~~~~~~l~~l~~~Cl~~dP~~RPs-----~~evl~  634 (705)
                      .+.......+.+++..|++.||++||+     +.++++
T Consensus       223 ~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~  260 (285)
T cd05632         223 VYSAKFSEEAKSICKMLLTKDPKQRLGCQEEGAGEVKR  260 (285)
T ss_pred             ccCccCCHHHHHHHHHHccCCHhHcCCCcccChHHHHc
Confidence            122233456788999999999999999     455554

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with

>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2

Probab=100.00  E-value=9.3e-37  Score=319.28  Aligned_cols=258  Identities=22%  Similarity=0.376  Sum_probs=205.4

Q ss_pred             hCCCCcceEEeecCceEEEEEEEcCCCe----EEEEEEeccCCc-hhHHHHHHHHHHhccCCCCCcceeeeeeeeccCce
Q 005257          363 TKGFSEENVIGVGGNGKVYKGVLEGGGA----EIAVKRISHEND-GGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSL  437 (705)
Q Consensus       363 t~~f~~~~~LG~G~fg~Vy~~~~~~~~~----~vavK~i~~~~~-~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~  437 (705)
                      .++|...++||+|+||+||+|.+..++.    .||+|.++.... ...+++.+|+.++..++||||++++++|..  ...
T Consensus         6 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~--~~~   83 (279)
T cd05109           6 ETELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVCRLLGICLT--STV   83 (279)
T ss_pred             hhheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCCCHHHHHHHHHHHHHHHhcCCCCCceEEEEEcC--CCc
Confidence            3567888999999999999999866655    489999875533 345678999999999999999999999874  456


Q ss_pred             EEEEeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeecccee
Q 005257          438 MLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARM  517 (705)
Q Consensus       438 ~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~  517 (705)
                      ++++||+++|+|.+++.....  .+++.+++.++.|++.||.|||+   ++++||||||+|||+++++.+||+|||+++.
T Consensus        84 ~l~~~~~~~g~l~~~l~~~~~--~~~~~~~~~~~~qi~~~L~~lH~---~~iiH~dlkp~Nil~~~~~~~kL~dfG~~~~  158 (279)
T cd05109          84 QLVTQLMPYGCLLDYVRENKD--RIGSQDLLNWCVQIAKGMSYLEE---VRLVHRDLAARNVLVKSPNHVKITDFGLARL  158 (279)
T ss_pred             EEEEEcCCCCCHHHHHhhccC--CCCHHHHHHHHHHHHHHHHHHHH---CCeeccccccceEEEcCCCcEEECCCCceee
Confidence            899999999999999976432  58999999999999999999998   9999999999999999999999999999987


Q ss_pred             cCCCCcce-eeeeeccccCCCccccccCCCCccccEEEEehhHHHHhh-CCCCCCCCCccHHHHHHHHHHhCchhHHHHH
Q 005257          518 HGHGQVAS-TTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLS-GRRPIEEGKPNLVEMVWELMVQGKLLDALDA  595 (705)
Q Consensus       518 ~~~~~~~~-~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~Ellt-G~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~  595 (705)
                      ........ .....++..|+|||.+.+..++.++|||||||++|||++ |..||.......   ....+..+..      
T Consensus       159 ~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~---~~~~~~~~~~------  229 (279)
T cd05109         159 LDIDETEYHADGGKVPIKWMALESILHRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPARE---IPDLLEKGER------  229 (279)
T ss_pred             cccccceeecCCCccchhhCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHH---HHHHHHCCCc------
Confidence            65332211 111234678999999988889999999999999999998 899987543211   1111111111      


Q ss_pred             hhhcCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHhccc
Q 005257          596 RLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLEGKIE  641 (705)
Q Consensus       596 ~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~  641 (705)
                           ...+......+.+++..||+.||++||++.++++.|+.+..
T Consensus       230 -----~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~l~~~l~~~~~  270 (279)
T cd05109         230 -----LPQPPICTIDVYMIMVKCWMIDSECRPRFRELVDEFSRMAR  270 (279)
T ss_pred             -----CCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhc
Confidence                 11122344568899999999999999999999999876644

Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve

>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

Probab=100.00  E-value=1e-36  Score=319.42  Aligned_cols=256  Identities=22%  Similarity=0.415  Sum_probs=204.8

Q ss_pred             CCCCcceEEeecCceEEEEEEEc-----CCCeEEEEEEeccCCchhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceE
Q 005257          364 KGFSEENVIGVGGNGKVYKGVLE-----GGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLM  438 (705)
Q Consensus       364 ~~f~~~~~LG~G~fg~Vy~~~~~-----~~~~~vavK~i~~~~~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~  438 (705)
                      ++|...++||+|+||.||++...     .++..+|+|.+..........+.+|++++++++|+||+++++++.. +...+
T Consensus         5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~   83 (280)
T cd05092           5 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTVLQHQHIVRFYGVCTE-GRPLL   83 (280)
T ss_pred             HhceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCCHHHHHHHHHHHHHHhcCCCCCCceEEEEEec-CCceE
Confidence            45677889999999999999753     3456899999877666667789999999999999999999998876 66789


Q ss_pred             EEEeeCCCCChhHHHHhcCC------------CCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCC
Q 005257          439 LVYDYMENGSLDKWIFQCDG------------SMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMN  506 (705)
Q Consensus       439 lV~E~~~~gsL~~~L~~~~~------------~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~  506 (705)
                      ++|||+++++|.+++.....            ...+++..+..++.|++.||+|||+   .+++||||||+|||+++++.
T Consensus        84 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~---~~i~H~dlkp~nil~~~~~~  160 (280)
T cd05092          84 MVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLAS---LHFVHRDLATRNCLVGQGLV  160 (280)
T ss_pred             EEEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHH---CCeecccccHhhEEEcCCCC
Confidence            99999999999999975431            1258899999999999999999998   99999999999999999999


Q ss_pred             eeeeeeccceecCCCCcce-eeeeeccccCCCccccccCCCCccccEEEEehhHHHHhh-CCCCCCCCCccHHHHHHHHH
Q 005257          507 GRLGDFGLARMHGHGQVAS-TTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLS-GRRPIEEGKPNLVEMVWELM  584 (705)
Q Consensus       507 ~kL~DFGla~~~~~~~~~~-~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~Ellt-G~~Pf~~~~~~~~~~v~~~~  584 (705)
                      +||+|||+++......... .....+++.|+|||.+.+..++.++|||||||++|||++ |+.||......  +. ....
T Consensus       161 ~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~--~~-~~~~  237 (280)
T cd05092         161 VKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDIWSFGVVLWEIFTYGKQPWYQLSNT--EA-IECI  237 (280)
T ss_pred             EEECCCCceeEcCCCceeecCCCccccccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCccCCHH--HH-HHHH
Confidence            9999999997654322111 122345678999999988889999999999999999998 89998654321  11 1111


Q ss_pred             HhCchhHHHHHhhhcCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHH
Q 005257          585 VQGKLLDALDARLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLE  637 (705)
Q Consensus       585 ~~~~~~~~id~~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  637 (705)
                      ..+.         .  ...+......+.+++.+||+.||++||++.++++.|+
T Consensus       238 ~~~~---------~--~~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~l~~~l~  279 (280)
T cd05092         238 TQGR---------E--LERPRTCPPEVYAIMQGCWQREPQQRMVIKDIHSRLQ  279 (280)
T ss_pred             HcCc---------c--CCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHh
Confidence            1111         0  1112233456889999999999999999999999886

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory

>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4

Probab=100.00  E-value=1e-36  Score=323.34  Aligned_cols=287  Identities=21%  Similarity=0.343  Sum_probs=222.6

Q ss_pred             hCCCCcceEEeecCceEEEEEEEcCCCe----EEEEEEeccCCc-hhHHHHHHHHHHhccCCCCCcceeeeeeeeccCce
Q 005257          363 TKGFSEENVIGVGGNGKVYKGVLEGGGA----EIAVKRISHEND-GGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSL  437 (705)
Q Consensus       363 t~~f~~~~~LG~G~fg~Vy~~~~~~~~~----~vavK~i~~~~~-~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~  437 (705)
                      .++|+..+.||+|+||.||+|.+..++.    .||+|.+..... ....++.+|+.+++.++||||++++++|..  ...
T Consensus         6 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~--~~~   83 (303)
T cd05110           6 ETELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLS--PTI   83 (303)
T ss_pred             hhhceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEcC--CCc
Confidence            3457778899999999999999876664    578998865433 234478899999999999999999998864  346


Q ss_pred             EEEEeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeecccee
Q 005257          438 MLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARM  517 (705)
Q Consensus       438 ~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~  517 (705)
                      ++++||+++|+|.+++.....  .+++..++.++.|++.||.|||+   ++|+||||||+||+++.++.+||+|||+++.
T Consensus        84 ~~v~e~~~~g~l~~~~~~~~~--~~~~~~~~~~~~qi~~~L~~LH~---~~ivH~dikp~Nill~~~~~~kL~Dfg~~~~  158 (303)
T cd05110          84 QLVTQLMPHGCLLDYVHEHKD--NIGSQLLLNWCVQIAKGMMYLEE---RRLVHRDLAARNVLVKSPNHVKITDFGLARL  158 (303)
T ss_pred             eeeehhcCCCCHHHHHHhccc--CCCHHHHHHHHHHHHHHHHHHhh---cCeeccccccceeeecCCCceEEcccccccc
Confidence            789999999999999875432  58899999999999999999998   9999999999999999999999999999986


Q ss_pred             cCCCCcc-eeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhh-CCCCCCCCCccHHHHHHHHHHhCchhHHHHH
Q 005257          518 HGHGQVA-STTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLS-GRRPIEEGKPNLVEMVWELMVQGKLLDALDA  595 (705)
Q Consensus       518 ~~~~~~~-~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~Ellt-G~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~  595 (705)
                      ....... ......++..|+|||.+.+..++.++|||||||++|||++ |+.||......   ...+.+..+..      
T Consensus       159 ~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DiwslG~~l~el~t~g~~p~~~~~~~---~~~~~~~~~~~------  229 (303)
T cd05110         159 LEGDEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTR---EIPDLLEKGER------  229 (303)
T ss_pred             ccCcccccccCCCccccccCCHHHhccCCCChHHHHHHHHHHHHHHHhCCCCCCCCCCHH---HHHHHHHCCCC------
Confidence            6433221 1122345678999999988889999999999999999997 89998754321   11122222111      


Q ss_pred             hhhcCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHhccccCCCCCcchhhHHHHHHhhccccccccccccccC
Q 005257          596 RLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLEGKIEAGIENETEDMDAYLLQQVKSKDMWANYSRSFGYG  675 (705)
Q Consensus       596 ~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~  675 (705)
                           ...+..+...+..++..||..+|++||++.++++.|+.....                ......+.+..+.....
T Consensus       230 -----~~~~~~~~~~~~~li~~c~~~~p~~Rp~~~~l~~~l~~~~~~----------------~~~~~~~~~~~~~~~~~  288 (303)
T cd05110         230 -----LPQPPICTIDVYMVMVKCWMIDADSRPKFKELAAEFSRMARD----------------PQRYLVIQGDDRMKLPS  288 (303)
T ss_pred             -----CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhc----------------hhhheeeccCCcCCCCC
Confidence                 111122345678899999999999999999999998854331                11224477788888888


Q ss_pred             CCCCCCccccc
Q 005257          676 YATHPTFHDIR  686 (705)
Q Consensus       676 ~~~hp~f~~~~  686 (705)
                      ..+||||....
T Consensus       289 ~~~~~~~~~~~  299 (303)
T cd05110         289 PNDSKFFQNLL  299 (303)
T ss_pred             CchhhHHhccc
Confidence            89999997644

Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin

>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors

Probab=100.00  E-value=1.4e-36  Score=316.01  Aligned_cols=255  Identities=30%  Similarity=0.499  Sum_probs=203.5

Q ss_pred             CCCcceEEeecCceEEEEEEEcCCCe---EEEEEEeccC-CchhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEEE
Q 005257          365 GFSEENVIGVGGNGKVYKGVLEGGGA---EIAVKRISHE-NDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLV  440 (705)
Q Consensus       365 ~f~~~~~LG~G~fg~Vy~~~~~~~~~---~vavK~i~~~-~~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~lV  440 (705)
                      .|+..+.||+|+||.||+|.+..++.   .||||.+... .....++|..|+.+++.++||||+++++++.. +...++|
T Consensus         5 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~-~~~~~lv   83 (269)
T cd05065           5 CVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTK-SRPVMII   83 (269)
T ss_pred             HeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCcCcceEEEEECC-CCceEEE
Confidence            46778999999999999999876554   6999998765 33456789999999999999999999998865 6678999


Q ss_pred             EeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecCC
Q 005257          441 YDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGH  520 (705)
Q Consensus       441 ~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~~  520 (705)
                      |||+++++|.+++.....  .+++.+++.++.|++.||.|||+   .+++|+||||+||+++.++.+||+|||+++....
T Consensus        84 ~e~~~~~~L~~~l~~~~~--~~~~~~~~~i~~~l~~al~~lH~---~g~~H~dl~p~nili~~~~~~kl~dfg~~~~~~~  158 (269)
T cd05065          84 TEFMENGALDSFLRQNDG--QFTVIQLVGMLRGIAAGMKYLSE---MNYVHRDLAARNILVNSNLVCKVSDFGLSRFLED  158 (269)
T ss_pred             EecCCCCcHHHHHhhCCC--CCCHHHHHHHHHHHHHHHHHHHH---CCEeecccChheEEEcCCCcEEECCCcccccccc
Confidence            999999999999976432  58999999999999999999998   9999999999999999999999999999876543


Q ss_pred             CCcce--eeeee--ccccCCCccccccCCCCccccEEEEehhHHHHhh-CCCCCCCCCccHHHHHHHHHHhCchhHHHHH
Q 005257          521 GQVAS--TTRVV--GTVGYLAPEVFSSGRASTQTDVFGFGILILEVLS-GRRPIEEGKPNLVEMVWELMVQGKLLDALDA  595 (705)
Q Consensus       521 ~~~~~--~~~~~--gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~Ellt-G~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~  595 (705)
                      .....  .....  .+..|+|||.+.+..++.++|||||||++|||++ |..||......   .+...+...        
T Consensus       159 ~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~e~l~~g~~p~~~~~~~---~~~~~i~~~--------  227 (269)
T cd05065         159 DTSDPTYTSSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQ---DVINAIEQD--------  227 (269)
T ss_pred             CccccccccccCCCcceeecCHhHhccCcccchhhhhhhHHHHHHHhcCCCCCCCCCCHH---HHHHHHHcC--------
Confidence            32211  11111  1457999999998899999999999999999886 99999764321   111111111        


Q ss_pred             hhhcCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHhc
Q 005257          596 RLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLEGK  639 (705)
Q Consensus       596 ~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~  639 (705)
                       ..  ...+.+.+..+.+++..||+.+|++||++.+++..|+..
T Consensus       228 -~~--~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~  268 (269)
T cd05065         228 -YR--LPPPMDCPTALHQLMLDCWQKDRNARPKFGQIVSTLDKM  268 (269)
T ss_pred             -Cc--CCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence             00  111233456688999999999999999999999998754

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr

>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta

Probab=100.00  E-value=2.9e-36  Score=324.18  Aligned_cols=256  Identities=23%  Similarity=0.284  Sum_probs=199.0

Q ss_pred             CCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccC---CchhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEEE
Q 005257          364 KGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHE---NDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLV  440 (705)
Q Consensus       364 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~---~~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~lV  440 (705)
                      ++|...+.||+|+||.||++....+++.||+|.+...   .....+.+.+|+.++..++|+||+++++++.. .+..++|
T Consensus         1 d~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~~-~~~~~lv   79 (331)
T cd05624           1 DDFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAFQD-ENYLYLV   79 (331)
T ss_pred             CCceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEEc-CCEEEEE
Confidence            4688899999999999999999989999999998642   22334567889999999999999999998875 6789999


Q ss_pred             EeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecCC
Q 005257          441 YDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGH  520 (705)
Q Consensus       441 ~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~~  520 (705)
                      |||+++|+|.+++.+...  .+++..+..++.|++.||.|||+   ++|+||||||+|||++.++.+||+|||+++....
T Consensus        80 ~Ey~~gg~L~~~l~~~~~--~l~~~~~~~~~~qi~~~L~~lH~---~~iiHrDlkp~Nill~~~~~~kl~DfG~a~~~~~  154 (331)
T cd05624          80 MDYYVGGDLLTLLSKFED--RLPEDMARFYIAEMVLAIHSIHQ---LHYVHRDIKPDNVLLDMNGHIRLADFGSCLKMNQ  154 (331)
T ss_pred             EeCCCCCcHHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHH---CCeeeccCchHHEEEcCCCCEEEEeccceeeccC
Confidence            999999999999976432  58999999999999999999998   9999999999999999999999999999987654


Q ss_pred             CCcceeeeeeccccCCCcccccc-----CCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhHHHHH
Q 005257          521 GQVASTTRVVGTVGYLAPEVFSS-----GRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDA  595 (705)
Q Consensus       521 ~~~~~~~~~~gt~~y~APE~~~~-----~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~  595 (705)
                      ..........||+.|+|||++.+     +.++.++|||||||++|||++|+.||.....  .+.. ..+.....      
T Consensus       155 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~--~~~~-~~i~~~~~------  225 (331)
T cd05624         155 DGTVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESL--VETY-GKIMNHEE------  225 (331)
T ss_pred             CCceeeccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCccCCCH--HHHH-HHHHcCCC------
Confidence            43333334579999999999865     4678899999999999999999999976432  1111 11111100      


Q ss_pred             hhhcCCCCCHHHHHHHHHHHHHcCCCCCCC--CCCHHHHHHH
Q 005257          596 RLRAKGGFDEDEVERVLHLGLLCAYPDPRA--RPTMRQVVKV  635 (705)
Q Consensus       596 ~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~--RPs~~evl~~  635 (705)
                      ++.. .....+..+.+.+++..|+..++++  |+++++++++
T Consensus       226 ~~~~-p~~~~~~~~~~~~li~~ll~~~~~~~~~~~~~~~~~h  266 (331)
T cd05624         226 RFQF-PSHITDVSEEAKDLIQRLICSRERRLGQNGIEDFKKH  266 (331)
T ss_pred             cccC-CCccccCCHHHHHHHHHHccCchhhcCCCCHHHHhcC
Confidence            0000 0011123456777888887755543  4677777664

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.

>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta

Probab=100.00  E-value=4.3e-37  Score=338.00  Aligned_cols=263  Identities=24%  Similarity=0.398  Sum_probs=206.8

Q ss_pred             HHhCCCCcceEEeecCceEEEEEEEcC-----CCeEEEEEEeccCCc-hhHHHHHHHHHHhccCC-CCCcceeeeeeeec
Q 005257          361 AATKGFSEENVIGVGGNGKVYKGVLEG-----GGAEIAVKRISHEND-GGTRAFLAEISSLGRLK-HKSLVGLRGWCKRE  433 (705)
Q Consensus       361 ~at~~f~~~~~LG~G~fg~Vy~~~~~~-----~~~~vavK~i~~~~~-~~~~~~~~Ei~~l~~l~-Hpniv~l~g~~~~~  433 (705)
                      ...++|...+.||+|+||.||+|++.+     .++.||||+++.... ...+.+.+|+++|.++. ||||+++++.|.. 
T Consensus        34 ~~~~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~~H~niv~~~~~~~~-  112 (401)
T cd05107          34 MPRDNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNIVNLLGACTK-  112 (401)
T ss_pred             ecHHHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCChhHHHHHHHHHHHHHhcCCCCCeEEEEEEEcc-
Confidence            344567778999999999999999643     456899999976532 33457899999999997 9999999999876 


Q ss_pred             cCceEEEEeeCCCCChhHHHHhcCC-------------------------------------------------------
Q 005257          434 KGSLMLVYDYMENGSLDKWIFQCDG-------------------------------------------------------  458 (705)
Q Consensus       434 ~~~~~lV~E~~~~gsL~~~L~~~~~-------------------------------------------------------  458 (705)
                      .+..++||||+++|+|.+++++...                                                       
T Consensus       113 ~~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  192 (401)
T cd05107         113 GGPIYIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDESADYVPM  192 (401)
T ss_pred             CCCcEEEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCccccCccch
Confidence            5688999999999999999975421                                                       


Q ss_pred             ----------------------------------------CCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCC
Q 005257          459 ----------------------------------------SMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSN  498 (705)
Q Consensus       459 ----------------------------------------~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~N  498 (705)
                                                              ...+++.++++++.|++.||.|||+   .+++||||||+|
T Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~---~~ivHrdlkp~N  269 (401)
T cd05107         193 QDMKGTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLAS---KNCVHRDLAARN  269 (401)
T ss_pred             hcchhhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhc---CCcCcccCCcce
Confidence                                                    1246788899999999999999998   999999999999


Q ss_pred             eEEccCCCeeeeeeccceecCCCCc-ceeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhh-CCCCCCCCCccH
Q 005257          499 VLLDKEMNGRLGDFGLARMHGHGQV-ASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLS-GRRPIEEGKPNL  576 (705)
Q Consensus       499 ILld~~~~~kL~DFGla~~~~~~~~-~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~Ellt-G~~Pf~~~~~~~  576 (705)
                      ||+++++.+||+|||+++....... .......++..|+|||.+.+..++.++|||||||++|||++ |+.||...... 
T Consensus       270 iLl~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~e~l~~g~~P~~~~~~~-  348 (401)
T cd05107         270 VLICEGKLVKICDFGLARDIMRDSNYISKGSTFLPLKWMAPESIFNNLYTTLSDVWSFGILLWEIFTLGGTPYPELPMN-  348 (401)
T ss_pred             EEEeCCCEEEEEecCcceecccccccccCCCcCCCCceeChHHhcCCCCCcHhHHHHHHHHHHHHHHcCCCCCCCCCch-
Confidence            9999999999999999986543221 11222356788999999988889999999999999999998 88998653321 


Q ss_pred             HHHHHHHHHhCchhHHHHHhhhcCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHhcc
Q 005257          577 VEMVWELMVQGKLLDALDARLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLEGKI  640 (705)
Q Consensus       577 ~~~v~~~~~~~~~~~~id~~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~  640 (705)
                       +.....+..+.         +  ...+......+.+++..||+.+|++||+++++++.|+..+
T Consensus       349 -~~~~~~~~~~~---------~--~~~p~~~~~~l~~li~~cl~~~P~~RPs~~ell~~L~~~~  400 (401)
T cd05107         349 -EQFYNAIKRGY---------R--MAKPAHASDEIYEIMQKCWEEKFEIRPDFSQLVHLVGDLL  400 (401)
T ss_pred             -HHHHHHHHcCC---------C--CCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHh
Confidence             11112222111         1  1112223467889999999999999999999999998653

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D

>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]

Probab=100.00  E-value=1.5e-36  Score=327.51  Aligned_cols=253  Identities=26%  Similarity=0.346  Sum_probs=213.2

Q ss_pred             HhCCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCCch---hHHHHHHHHHHhccCC-CCCcceeeeeeeeccCce
Q 005257          362 ATKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDG---GTRAFLAEISSLGRLK-HKSLVGLRGWCKREKGSL  437 (705)
Q Consensus       362 at~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~~---~~~~~~~Ei~~l~~l~-Hpniv~l~g~~~~~~~~~  437 (705)
                      ....|...+.||+|.||.||+++.+.+|+.+|+|.+.+....   ....+.+|+.+|+++. ||||+.+.+.+.. ...+
T Consensus        33 ~~~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~-~~~~  111 (382)
T KOG0032|consen   33 IKEKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFED-PDSV  111 (382)
T ss_pred             ccccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEc-CCeE
Confidence            345678889999999999999999999999999999776432   3468899999999998 9999999999886 6789


Q ss_pred             EEEEeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccC----CCeeeeeec
Q 005257          438 MLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKE----MNGRLGDFG  513 (705)
Q Consensus       438 ~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~----~~~kL~DFG  513 (705)
                      ++|||++.||.|.+.+...    .+++.+...++.|++.++.|||+   .+|+||||||+|+|+...    +.+|++|||
T Consensus       112 ~lvmEL~~GGeLfd~i~~~----~~sE~da~~~~~~il~av~~lH~---~gvvHrDlKpEN~L~~~~~~~~~~ik~~DFG  184 (382)
T KOG0032|consen  112 YLVMELCEGGELFDRIVKK----HYSERDAAGIIRQILEAVKYLHS---LGVVHRDLKPENLLLASKDEGSGRIKLIDFG  184 (382)
T ss_pred             EEEEEecCCchHHHHHHHc----cCCHHHHHHHHHHHHHHHHHHHh---CCceeccCCHHHeeeccccCCCCcEEEeeCC
Confidence            9999999999999999765    29999999999999999999999   999999999999999643    479999999


Q ss_pred             cceecCCCCcceeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhHHH
Q 005257          514 LARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDAL  593 (705)
Q Consensus       514 la~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~~i  593 (705)
                      ++.....  .......+||+.|+|||++....|+..+||||+||++|.|++|..||........   ...+..++.    
T Consensus       185 la~~~~~--~~~~~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~~~---~~~i~~~~~----  255 (382)
T KOG0032|consen  185 LAKFIKP--GERLHTIVGTPEYVAPEVLGGRPYGDEVDVWSIGVILYILLSGVPPFWGETEFEI---FLAILRGDF----  255 (382)
T ss_pred             CceEccC--CceEeeecCCccccCchhhcCCCCCcccchhHHHHHHHHHhhCCCCCcCCChhHH---HHHHHcCCC----
Confidence            9998876  3345568999999999999989999999999999999999999999987653211   113333332    


Q ss_pred             HHhhhcCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 005257          594 DARLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKV  635 (705)
Q Consensus       594 d~~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  635 (705)
                          .-...+-......+.+++..|+..||.+|+++.+++++
T Consensus       256 ----~f~~~~w~~is~~akd~i~~ll~~dp~~R~ta~~~L~H  293 (382)
T KOG0032|consen  256 ----DFTSEPWDDISESAKDFIRKLLEFDPRKRLTAAQALQH  293 (382)
T ss_pred             ----CCCCCCccccCHHHHHHHHHhcccCcccCCCHHHHhcC
Confidence                11122233446778899999999999999999999985

>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=100.00  E-value=2e-36  Score=317.74  Aligned_cols=268  Identities=22%  Similarity=0.355  Sum_probs=203.5

Q ss_pred             CCCcceEEeecCceEEEEEEE----cCCCeEEEEEEeccCC-chhHHHHHHHHHHhccCCCCCcceeeeeeeec-cCceE
Q 005257          365 GFSEENVIGVGGNGKVYKGVL----EGGGAEIAVKRISHEN-DGGTRAFLAEISSLGRLKHKSLVGLRGWCKRE-KGSLM  438 (705)
Q Consensus       365 ~f~~~~~LG~G~fg~Vy~~~~----~~~~~~vavK~i~~~~-~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~-~~~~~  438 (705)
                      .|...+.||+|+||.||++..    ..++..||+|.++... ....+.+.+|+.+++.++|||++++.+++... ....+
T Consensus         5 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~   84 (284)
T cd05079           5 FLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIK   84 (284)
T ss_pred             hhhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccccHHHHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCCceE
Confidence            467789999999999999985    3457889999987553 33456799999999999999999999988764 35689


Q ss_pred             EEEeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceec
Q 005257          439 LVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMH  518 (705)
Q Consensus       439 lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~  518 (705)
                      +||||+++++|.+++.+...  .+++.++..++.|++.||+|||+   ++++||||||+||+++.++.+||+|||+++..
T Consensus        85 lv~e~~~g~~L~~~l~~~~~--~~~~~~~~~i~~~i~~aL~~lH~---~gi~H~dlkp~Nil~~~~~~~~l~dfg~~~~~  159 (284)
T cd05079          85 LIMEFLPSGSLKEYLPRNKN--KINLKQQLKYAVQICKGMDYLGS---RQYVHRDLAARNVLVESEHQVKIGDFGLTKAI  159 (284)
T ss_pred             EEEEccCCCCHHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHH---CCeeecccchheEEEcCCCCEEECCCcccccc
Confidence            99999999999999865432  58999999999999999999998   99999999999999999999999999999866


Q ss_pred             CCCCcc--eeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCch---hHHH
Q 005257          519 GHGQVA--STTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKL---LDAL  593 (705)
Q Consensus       519 ~~~~~~--~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~---~~~i  593 (705)
                      ......  ......++..|+|||++.+..++.++|||||||++|||++++.|.........+.......+...   ...+
T Consensus       160 ~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~ellt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (284)
T cd05079         160 ETDKEYYTVKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTLYELLTYCDSESSPMTLFLKMIGPTHGQMTVTRLVRVL  239 (284)
T ss_pred             ccCccceeecCCCCCCccccCHHHhccCCCCccccchhhhhhhhhhhcCCCCCccccchhhhhcccccccccHHHHHHHH
Confidence            443221  11224567789999999888899999999999999999998776533211110000000000000   0001


Q ss_pred             HHhhhcCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHhc
Q 005257          594 DARLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLEGK  639 (705)
Q Consensus       594 d~~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~  639 (705)
                      .....  ..........+.+++..||+.+|++||++.++++.|+..
T Consensus       240 ~~~~~--~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~~~  283 (284)
T cd05079         240 EEGKR--LPRPPNCPEEVYQLMRKCWEFQPSKRTTFQNLIEGFEAI  283 (284)
T ss_pred             HcCcc--CCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHHHHhh
Confidence            10000  111223456799999999999999999999999998754

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a

>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

Probab=100.00  E-value=1.5e-36  Score=313.65  Aligned_cols=248  Identities=30%  Similarity=0.471  Sum_probs=199.9

Q ss_pred             eEEeecCceEEEEEEEcCCC---eEEEEEEeccCCc-hhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEEEEeeCC
Q 005257          370 NVIGVGGNGKVYKGVLEGGG---AEIAVKRISHEND-GGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYME  445 (705)
Q Consensus       370 ~~LG~G~fg~Vy~~~~~~~~---~~vavK~i~~~~~-~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~lV~E~~~  445 (705)
                      ++||+|+||.||+|++...+   ..+|+|.+..... ...+++.+|++++++++||||+++++++.  ....++||||++
T Consensus         1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~--~~~~~~v~e~~~   78 (257)
T cd05060           1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCIVRLIGVCK--GEPLMLVMELAP   78 (257)
T ss_pred             CccCccCceeEEEeEeeccCCCcceEEEEecccccchHHHHHHHHHHHHHHhcCCCCeeeEEEEEc--CCceEEEEEeCC
Confidence            46999999999999876544   7899999875543 34567899999999999999999999875  456799999999


Q ss_pred             CCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecCCCCcce
Q 005257          446 NGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVAS  525 (705)
Q Consensus       446 ~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~~~~~~~  525 (705)
                      +|+|.+++....   .+++..+..++.|++.||.|||+   .+++|+||||+|||++.++.+||+|||+++.........
T Consensus        79 ~~~L~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lh~---~~i~H~di~p~nili~~~~~~kl~df~~~~~~~~~~~~~  152 (257)
T cd05060          79 LGPLLKYLKKRR---EIPVSDLKELAHQVAMGMAYLES---KHFVHRDLAARNVLLVNRHQAKISDFGMSRALGAGSDYY  152 (257)
T ss_pred             CCcHHHHHHhCC---CCCHHHHHHHHHHHHHHHHHHhh---cCeeccCcccceEEEcCCCcEEeccccccceeecCCccc
Confidence            999999997643   68999999999999999999998   999999999999999999999999999998664433221


Q ss_pred             e--eeeeccccCCCccccccCCCCccccEEEEehhHHHHhh-CCCCCCCCCccHHHHHHHHHHhCchhHHHHHhhhcCCC
Q 005257          526 T--TRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLS-GRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRAKGG  602 (705)
Q Consensus       526 ~--~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~Ellt-G~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~l~~~~~  602 (705)
                      .  ....++..|+|||.+.+..++.++|||||||++|||++ |+.||......   .+......+..           ..
T Consensus       153 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~~~---~~~~~~~~~~~-----------~~  218 (257)
T cd05060         153 RATTAGRWPLKWYAPECINYGKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKGA---EVIAMLESGER-----------LP  218 (257)
T ss_pred             ccccCccccccccCHHHhcCCCCCccchHHHHHHHHHHHHcCCCCCcccCCHH---HHHHHHHcCCc-----------CC
Confidence            1  11223567999999988889999999999999999998 99999764321   11222222211           11


Q ss_pred             CCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHhc
Q 005257          603 FDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLEGK  639 (705)
Q Consensus       603 ~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~  639 (705)
                      .+......+.+++.+||+++|++||++.++++.|++.
T Consensus       219 ~~~~~~~~l~~li~~cl~~~p~~Rp~~~~l~~~l~~~  255 (257)
T cd05060         219 RPEECPQEIYSIMLSCWKYRPEDRPTFSELESTFRRD  255 (257)
T ss_pred             CCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhc
Confidence            2223346788999999999999999999999999854

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi

>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha

Probab=100.00  E-value=3e-36  Score=324.11  Aligned_cols=256  Identities=23%  Similarity=0.278  Sum_probs=197.8

Q ss_pred             CCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccC---CchhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEEE
Q 005257          364 KGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHE---NDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLV  440 (705)
Q Consensus       364 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~---~~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~lV  440 (705)
                      ++|...++||+|+||.||++.++.+++.+|+|++...   .....+.+.+|+.++..++|+||+++++.+.. .+.+++|
T Consensus         1 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~-~~~~~lv   79 (332)
T cd05623           1 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAFQD-ENNLYLV   79 (332)
T ss_pred             CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEec-CCEEEEE
Confidence            4688899999999999999999999999999998642   22334558889999999999999999998875 6789999


Q ss_pred             EeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecCC
Q 005257          441 YDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGH  520 (705)
Q Consensus       441 ~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~~  520 (705)
                      |||+++|+|.+++.+...  .+++..+..++.|++.||.|||+   ++|+||||||+|||++.++.+||+|||++.....
T Consensus        80 ~ey~~~g~L~~~l~~~~~--~l~~~~~~~~~~qi~~al~~lH~---~~iiHrDlkp~Nili~~~~~~kL~DfG~a~~~~~  154 (332)
T cd05623          80 MDYYVGGDLLTLLSKFED--RLPEDMARFYLAEMVIAIDSVHQ---LHYVHRDIKPDNILMDMNGHIRLADFGSCLKLME  154 (332)
T ss_pred             EeccCCCcHHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHH---CCeEecCCCHHHEEECCCCCEEEeecchheeccc
Confidence            999999999999976432  58999999999999999999998   9999999999999999999999999999976544


Q ss_pred             CCcceeeeeeccccCCCccccc-----cCCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhHHHHH
Q 005257          521 GQVASTTRVVGTVGYLAPEVFS-----SGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDA  595 (705)
Q Consensus       521 ~~~~~~~~~~gt~~y~APE~~~-----~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~  595 (705)
                      ..........||+.|+|||++.     ...++.++|||||||++|||++|+.||.....  .+.... +.....      
T Consensus       155 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~~~~--~~~~~~-i~~~~~------  225 (332)
T cd05623         155 DGTVQSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAESL--VETYGK-IMNHKE------  225 (332)
T ss_pred             CCcceecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCCCCH--HHHHHH-HhCCCc------
Confidence            3333333457999999999986     34688999999999999999999999976432  122111 111100      


Q ss_pred             hhhcCCCCCHHHHHHHHHHHHHcCC--CCCCCCCCHHHHHHH
Q 005257          596 RLRAKGGFDEDEVERVLHLGLLCAY--PDPRARPTMRQVVKV  635 (705)
Q Consensus       596 ~l~~~~~~~~~~~~~l~~l~~~Cl~--~dP~~RPs~~evl~~  635 (705)
                      +... ..........+.+++..|+.  +++..||++.+++++
T Consensus       226 ~~~~-p~~~~~~s~~~~~li~~ll~~~~~r~~r~~~~~~~~h  266 (332)
T cd05623         226 RFQF-PAQVTDVSEDAKDLIRRLICSREHRLGQNGIEDFKQH  266 (332)
T ss_pred             cccC-CCccccCCHHHHHHHHHHccChhhhcCCCCHHHHhCC
Confidence            0000 00011223456667777664  444457899988875

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw

>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

Probab=100.00  E-value=2.9e-36  Score=316.52  Aligned_cols=254  Identities=26%  Similarity=0.386  Sum_probs=203.6

Q ss_pred             CCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccC-CchhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEEEEee
Q 005257          365 GFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHE-NDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDY  443 (705)
Q Consensus       365 ~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~-~~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~lV~E~  443 (705)
                      +|+..+.||+|+||.||++....++..||+|.+... .......+.+|++++.+++||||+++++.+.. .+..++||||
T Consensus         2 ~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~-~~~~~lv~e~   80 (286)
T cd06622           2 EIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLELDESKFNQIIMELDILHKAVSPYIVDFYGAFFI-EGAVYMCMEY   80 (286)
T ss_pred             hhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeecccCHHHHHHHHHHHHHHHhcCCCcHHhhhhheec-CCeEEEEEee
Confidence            577788999999999999999988999999988754 33345678999999999999999999998876 6789999999


Q ss_pred             CCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecCCCCc
Q 005257          444 MENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQV  523 (705)
Q Consensus       444 ~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~~~~~  523 (705)
                      +++++|..++........+++..+..++.|++.||.|||+  +.+++|+||||+||+++.++.+||+|||++....... 
T Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~--~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~-  157 (286)
T cd06622          81 MDAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKE--EHNIIHRDVKPTNVLVNGNGQVKLCDFGVSGNLVASL-  157 (286)
T ss_pred             cCCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHh--cCCEeeCCCCHHHEEECCCCCEEEeecCCcccccCCc-
Confidence            9999999998764323368999999999999999999996  2589999999999999999999999999997653322 


Q ss_pred             ceeeeeeccccCCCccccccC------CCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhHHHHHhh
Q 005257          524 ASTTRVVGTVGYLAPEVFSSG------RASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDARL  597 (705)
Q Consensus       524 ~~~~~~~gt~~y~APE~~~~~------~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~l  597 (705)
                        .....|++.|+|||.+.+.      .++.++|||||||++|||++|+.||.................+.         
T Consensus       158 --~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~---------  226 (286)
T cd06622         158 --AKTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPETYANIFAQLSAIVDGD---------  226 (286)
T ss_pred             --cccCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCCcchhhHHHHHHHHhhcC---------
Confidence              1224678899999998554      34889999999999999999999997543211111111111111         


Q ss_pred             hcCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 005257          598 RAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKV  635 (705)
Q Consensus       598 ~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  635 (705)
                        ....+......+.+++.+||+.+|++||++.+++..
T Consensus       227 --~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~  262 (286)
T cd06622         227 --PPTLPSGYSDDAQDFVAKCLNKIPNRRPTYAQLLEH  262 (286)
T ss_pred             --CCCCCcccCHHHHHHHHHHcccCcccCCCHHHHhcC
Confidence              022333456778899999999999999999999884

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

Probab=100.00  E-value=1.7e-36  Score=322.44  Aligned_cols=263  Identities=25%  Similarity=0.386  Sum_probs=200.5

Q ss_pred             CCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCCc-hhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEEEEe
Q 005257          364 KGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHEND-GGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYD  442 (705)
Q Consensus       364 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~-~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~lV~E  442 (705)
                      ++|...+.||+|+||.||+|....+++.||+|+++.... .....+.+|+.++++++||||+++++++.. ++..++|||
T Consensus         6 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-~~~~~lv~e   84 (309)
T cd07872           6 ETYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIVHT-DKSLTLVFE   84 (309)
T ss_pred             CceEEEEEecccCCEEEEEEEecCCCCeEEEEEeeccccCCcchhHHHHHHHHHhCCCCCcceEEEEEee-CCeEEEEEe
Confidence            568889999999999999999998899999999875532 234567889999999999999999998876 678999999


Q ss_pred             eCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecCCCC
Q 005257          443 YMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQ  522 (705)
Q Consensus       443 ~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~~~~  522 (705)
                      |+++ +|.+++.....  .+++.++..++.|++.||.|||+   ++|+||||||+|||++.++.+||+|||+++......
T Consensus        85 ~~~~-~l~~~~~~~~~--~~~~~~~~~~~~qi~~aL~~lH~---~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~  158 (309)
T cd07872          85 YLDK-DLKQYMDDCGN--IMSMHNVKIFLYQILRGLAYCHR---RKVLHRDLKPQNLLINERGELKLADFGLARAKSVPT  158 (309)
T ss_pred             CCCC-CHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEECCCCCEEECccccceecCCCc
Confidence            9975 88888865432  58899999999999999999998   999999999999999999999999999997654322


Q ss_pred             cceeeeeeccccCCCcccccc-CCCCccccEEEEehhHHHHhhCCCCCCCCCcc-HHHHHHHHHHhCchhHHH-------
Q 005257          523 VASTTRVVGTVGYLAPEVFSS-GRASTQTDVFGFGILILEVLSGRRPIEEGKPN-LVEMVWELMVQGKLLDAL-------  593 (705)
Q Consensus       523 ~~~~~~~~gt~~y~APE~~~~-~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~-~~~~v~~~~~~~~~~~~i-------  593 (705)
                      .. .....+++.|+|||.+.+ ..++.++|||||||++|||++|+.||...... ....+..... ....+..       
T Consensus       159 ~~-~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~  236 (309)
T cd07872         159 KT-YSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVEDELHLIFRLLG-TPTEETWPGISSND  236 (309)
T ss_pred             cc-cccccccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhC-CCCHHHHhhhcchh
Confidence            21 122467899999999865 46899999999999999999999999765421 1111111110 0000000       


Q ss_pred             ---HHhhhcCC-----CCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 005257          594 ---DARLRAKG-----GFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKV  635 (705)
Q Consensus       594 ---d~~l~~~~-----~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  635 (705)
                         +.......     .........+.+++..|++.||.+|||+.|++++
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h  286 (309)
T cd07872         237 EFKNYNFPKYKPQPLINHAPRLDTEGIELLTKFLQYESKKRISAEEAMKH  286 (309)
T ss_pred             hhhhhhcCccCCCchhhhccCCCHHHHHHHHHhccCChhhCCCHHHHhcC
Confidence               00000000     0001123457899999999999999999999873

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play

>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors

Probab=100.00  E-value=1.7e-36  Score=315.23  Aligned_cols=256  Identities=30%  Similarity=0.497  Sum_probs=204.3

Q ss_pred             CCCCcceEEeecCceEEEEEEEcCCC---eEEEEEEeccCC-chhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEE
Q 005257          364 KGFSEENVIGVGGNGKVYKGVLEGGG---AEIAVKRISHEN-DGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLML  439 (705)
Q Consensus       364 ~~f~~~~~LG~G~fg~Vy~~~~~~~~---~~vavK~i~~~~-~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~l  439 (705)
                      .+|...+.||+|+||.||+|.+..++   ..+|+|.++... ....+.+.+|+.++.+++||||+++++++.. ++..++
T Consensus         4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~l   82 (267)
T cd05066           4 SCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTK-SKPVMI   82 (267)
T ss_pred             HHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEec-CCccEE
Confidence            45778899999999999999886433   479999886543 3345678999999999999999999998875 678899


Q ss_pred             EEeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecC
Q 005257          440 VYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHG  519 (705)
Q Consensus       440 V~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~  519 (705)
                      ||||+++++|.+++.....  .+++.++..++.|++.||.|||+   ++++||||||+|||++.++.++|+|||+++...
T Consensus        83 v~e~~~~~~L~~~~~~~~~--~~~~~~~~~i~~~i~~~l~~lH~---~~i~h~dlkp~nili~~~~~~~l~dfg~~~~~~  157 (267)
T cd05066          83 VTEYMENGSLDAFLRKHDG--QFTVIQLVGMLRGIASGMKYLSD---MGYVHRDLAARNILVNSNLVCKVSDFGLSRVLE  157 (267)
T ss_pred             EEEcCCCCCHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHH---CCEeehhhchhcEEECCCCeEEeCCCCcccccc
Confidence            9999999999999976432  58999999999999999999998   999999999999999999999999999998765


Q ss_pred             CCCcceee--eeeccccCCCccccccCCCCccccEEEEehhHHHHhh-CCCCCCCCCccHHHHHHHHHHhCchhHHHHHh
Q 005257          520 HGQVASTT--RVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLS-GRRPIEEGKPNLVEMVWELMVQGKLLDALDAR  596 (705)
Q Consensus       520 ~~~~~~~~--~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~Ellt-G~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~  596 (705)
                      ........  ...++..|+|||.+.+..++.++|||||||++||+++ |+.||......   .....+.++.        
T Consensus       158 ~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~ell~~g~~p~~~~~~~---~~~~~~~~~~--------  226 (267)
T cd05066         158 DDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWEMSNQ---DVIKAIEEGY--------  226 (267)
T ss_pred             cccceeeecCCCccceeecCHhHhccCccCchhhhHHHHHHHHHHhcCCCCCcccCCHH---HHHHHHhCCC--------
Confidence            43221111  1223567999999998889999999999999999886 99999764321   1111121110        


Q ss_pred             hhcCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHhc
Q 005257          597 LRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLEGK  639 (705)
Q Consensus       597 l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~  639 (705)
                       .  .......+..+.+++..|++.+|++||++.++++.|+..
T Consensus       227 -~--~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~  266 (267)
T cd05066         227 -R--LPAPMDCPAALHQLMLDCWQKDRNERPKFEQIVSILDKL  266 (267)
T ss_pred             -c--CCCCCCCCHHHHHHHHHHcccCchhCCCHHHHHHHHHhh
Confidence             0  111223345678999999999999999999999998753

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul

>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor

Probab=100.00  E-value=1.5e-36  Score=319.49  Aligned_cols=261  Identities=24%  Similarity=0.421  Sum_probs=204.9

Q ss_pred             HhCCCCcceEEeecCceEEEEEEEcC-----CCeEEEEEEeccCCc-hhHHHHHHHHHHhccCCCCCcceeeeeeeeccC
Q 005257          362 ATKGFSEENVIGVGGNGKVYKGVLEG-----GGAEIAVKRISHEND-GGTRAFLAEISSLGRLKHKSLVGLRGWCKREKG  435 (705)
Q Consensus       362 at~~f~~~~~LG~G~fg~Vy~~~~~~-----~~~~vavK~i~~~~~-~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~  435 (705)
                      .+++|+..+.||+|+||.||+|..++     .+..||+|.+..... .....+.+|+.++++++||||+++++++.. ..
T Consensus         4 ~~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~   82 (288)
T cd05061           4 SREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSK-GQ   82 (288)
T ss_pred             cHHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcC-CC
Confidence            45678999999999999999997652     245799998864432 234568899999999999999999998876 56


Q ss_pred             ceEEEEeeCCCCChhHHHHhcCC-------CCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCee
Q 005257          436 SLMLVYDYMENGSLDKWIFQCDG-------SMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGR  508 (705)
Q Consensus       436 ~~~lV~E~~~~gsL~~~L~~~~~-------~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~k  508 (705)
                      ..++||||+++|+|.+++.+...       ...+++..+.+++.|++.||.|||+   ++|+||||||+||++++++.+|
T Consensus        83 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~---~~i~H~dikp~nili~~~~~~~  159 (288)
T cd05061          83 PTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNA---KKFVHRDLAARNCMVAHDFTVK  159 (288)
T ss_pred             CcEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHh---CCCcCCCCChheEEEcCCCcEE
Confidence            78999999999999999975321       2346778899999999999999998   9999999999999999999999


Q ss_pred             eeeeccceecCCCCcc-eeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhh-CCCCCCCCCccHHHHHHHHHHh
Q 005257          509 LGDFGLARMHGHGQVA-STTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLS-GRRPIEEGKPNLVEMVWELMVQ  586 (705)
Q Consensus       509 L~DFGla~~~~~~~~~-~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~Ellt-G~~Pf~~~~~~~~~~v~~~~~~  586 (705)
                      |+|||+++........ ......++..|+|||.+.++.++.++|||||||++|||++ |..||......   .+......
T Consensus       160 L~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~DvwslG~~l~el~~~~~~p~~~~~~~---~~~~~~~~  236 (288)
T cd05061         160 IGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNE---QVLKFVMD  236 (288)
T ss_pred             ECcCCccccccccccccccCCCcccccccCHHHhccCCCChHhHHHHHHHHHHHHHhCCCCCCCCCCHH---HHHHHHHc
Confidence            9999999865432221 1122245678999999988889999999999999999998 78888653321   11111111


Q ss_pred             CchhHHHHHhhhcCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHhcc
Q 005257          587 GKLLDALDARLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLEGKI  640 (705)
Q Consensus       587 ~~~~~~id~~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~  640 (705)
                      +..           ...+......+.+++.+|++.||++||++.++++.|+...
T Consensus       237 ~~~-----------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~~~  279 (288)
T cd05061         237 GGY-----------LDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDL  279 (288)
T ss_pred             CCC-----------CCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHhhc
Confidence            111           1112233467899999999999999999999999988543

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta

>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

Probab=100.00  E-value=1.4e-36  Score=322.32  Aligned_cols=259  Identities=26%  Similarity=0.429  Sum_probs=205.4

Q ss_pred             hCCCCcceEEeecCceEEEEEEE-----cCCCeEEEEEEeccCC-chhHHHHHHHHHHhccC-CCCCcceeeeeeeeccC
Q 005257          363 TKGFSEENVIGVGGNGKVYKGVL-----EGGGAEIAVKRISHEN-DGGTRAFLAEISSLGRL-KHKSLVGLRGWCKREKG  435 (705)
Q Consensus       363 t~~f~~~~~LG~G~fg~Vy~~~~-----~~~~~~vavK~i~~~~-~~~~~~~~~Ei~~l~~l-~Hpniv~l~g~~~~~~~  435 (705)
                      .++|...+.||+|+||.||++..     ...+..||||+++... ....+.+.+|+.+++++ +||||+++++.|.. .+
T Consensus        34 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~-~~  112 (302)
T cd05055          34 RNNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHLGNHENIVNLLGACTI-GG  112 (302)
T ss_pred             HHHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCChHHHHHHHHHHHHHHhccCCCCcceEEEEEec-CC
Confidence            35688899999999999999985     2345689999987553 33456789999999999 79999999998876 66


Q ss_pred             ceEEEEeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccc
Q 005257          436 SLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLA  515 (705)
Q Consensus       436 ~~~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla  515 (705)
                      ..++||||+++|+|.+++...... .+++.++..++.|++.||.|||+   ++++|+||||+|||++.++.+||+|||++
T Consensus       113 ~~~lv~e~~~~~~L~~~i~~~~~~-~l~~~~~~~i~~~i~~~l~~lH~---~~ivH~dlkp~Nil~~~~~~~~l~dfg~~  188 (302)
T cd05055         113 PILVITEYCCYGDLLNFLRRKRES-FLTLEDLLSFSYQVAKGMAFLAS---KNCIHRDLAARNVLLTHGKIVKICDFGLA  188 (302)
T ss_pred             ceEEEEEcCCCCcHHHHHHhCCCC-CCCHHHHHHHHHHHHHHHHHHHH---CCeehhhhccceEEEcCCCeEEECCCccc
Confidence            889999999999999999754332 48999999999999999999998   99999999999999999999999999999


Q ss_pred             eecCCCCcc-eeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhh-CCCCCCCCCccHHHHHHHHHHhCchhHHH
Q 005257          516 RMHGHGQVA-STTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLS-GRRPIEEGKPNLVEMVWELMVQGKLLDAL  593 (705)
Q Consensus       516 ~~~~~~~~~-~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~Ellt-G~~Pf~~~~~~~~~~v~~~~~~~~~~~~i  593 (705)
                      +........ ......++..|+|||.+.+..++.++|||||||++|||++ |+.||......  +........+      
T Consensus       189 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~t~g~~p~~~~~~~--~~~~~~~~~~------  260 (302)
T cd05055         189 RDIMNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSNPYPGMPVD--SKFYKLIKEG------  260 (302)
T ss_pred             ccccCCCceeecCCCCcccccCCHhhhccCCCCcHhHHHHHHHHHHHHHhCCCCCcCCCCch--HHHHHHHHcC------
Confidence            865433221 1112345678999999988889999999999999999998 99998754321  1111111111      


Q ss_pred             HHhhhcCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHhc
Q 005257          594 DARLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLEGK  639 (705)
Q Consensus       594 d~~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~  639 (705)
                         ..  ...+......+.+++..||+++|++||++.|+++.|+..
T Consensus       261 ---~~--~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ell~~l~~~  301 (302)
T cd05055         261 ---YR--MAQPEHAPAEIYDIMKTCWDADPLKRPTFKQIVQLIGKQ  301 (302)
T ss_pred             ---Cc--CCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHhh
Confidence               11  111122345788999999999999999999999999753

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept

>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

Probab=100.00  E-value=3e-36  Score=316.60  Aligned_cols=263  Identities=24%  Similarity=0.340  Sum_probs=197.1

Q ss_pred             CCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCC--chhHHHHHHHHHHhccC---CCCCcceeeeeeeec----cC
Q 005257          365 GFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHEN--DGGTRAFLAEISSLGRL---KHKSLVGLRGWCKRE----KG  435 (705)
Q Consensus       365 ~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~--~~~~~~~~~Ei~~l~~l---~Hpniv~l~g~~~~~----~~  435 (705)
                      +|+..+.||+|+||.||+|.+..+++.||+|.++...  ......+.+|+.+++++   +||||+++++++...    ..
T Consensus         1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~~   80 (288)
T cd07863           1 QYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRET   80 (288)
T ss_pred             CceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCCc
Confidence            4778899999999999999999999999999987542  22234566777777665   699999999987532    34


Q ss_pred             ceEEEEeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccc
Q 005257          436 SLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLA  515 (705)
Q Consensus       436 ~~~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla  515 (705)
                      ..++||||+++ +|.+++..... ..+++.++..++.|++.||.|||+   .+++||||||+|||++.++.+||+|||++
T Consensus        81 ~~~lv~e~~~~-~l~~~~~~~~~-~~~~~~~~~~~~~qi~~al~~lH~---~~ivH~dikp~Nili~~~~~~kl~dfg~~  155 (288)
T cd07863          81 KVTLVFEHVDQ-DLRTYLDKVPP-PGLPAETIKDLMRQFLRGLDFLHA---NCIVHRDLKPENILVTSGGQVKLADFGLA  155 (288)
T ss_pred             eEEEEEccccc-CHHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEECCCCCEEECccCcc
Confidence            57999999974 89888876443 258999999999999999999998   99999999999999999999999999999


Q ss_pred             eecCCCCcceeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhhCCCCCCCCCcc-HHHHHHHHHHhCchhHHHH
Q 005257          516 RMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPN-LVEMVWELMVQGKLLDALD  594 (705)
Q Consensus       516 ~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~-~~~~v~~~~~~~~~~~~id  594 (705)
                      +.......  .....||..|+|||++.+..++.++||||+||++|||++|+.||...... ....+........ .....
T Consensus       156 ~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~-~~~~~  232 (288)
T cd07863         156 RIYSCQMA--LTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPP-EDDWP  232 (288)
T ss_pred             ccccCccc--CCCccccccccCchHhhCCCCCCcchhhhHHHHHHHHHhCCcCcCCCCHHHHHHHHHHHhCCCC-hhhCc
Confidence            87643321  22356899999999998888999999999999999999999999754321 1111111110000 00000


Q ss_pred             Hhhh-------cC-----CCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 005257          595 ARLR-------AK-----GGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKV  635 (705)
Q Consensus       595 ~~l~-------~~-----~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  635 (705)
                      ....       ..     ....+...+.+.+++..|++.||++|||+.|++++
T Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~~~l~h  285 (288)
T cd07863         233 RDVTLPRGAFSPRGPRPVQSVVPEIEESGAQLLLEMLTFNPHKRISAFRALQH  285 (288)
T ss_pred             ccccccccccCCCCCCchHHhCcCcCHHHHHHHHHHhccCcccCCCHHHHhcC
Confidence            0000       00     00011233567899999999999999999998863

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou

>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=100.00  E-value=2.3e-36  Score=313.85  Aligned_cols=241  Identities=24%  Similarity=0.408  Sum_probs=190.1

Q ss_pred             eEEeecCceEEEEEEEcCC------------CeEEEEEEeccCCchhHHHHHHHHHHhccCCCCCcceeeeeeeeccCce
Q 005257          370 NVIGVGGNGKVYKGVLEGG------------GAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSL  437 (705)
Q Consensus       370 ~~LG~G~fg~Vy~~~~~~~------------~~~vavK~i~~~~~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~  437 (705)
                      +.||+|+||.||+|+....            ...|++|.+..........+.+|+.++..++||||++++++|.. +...
T Consensus         1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~-~~~~   79 (262)
T cd05077           1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSHRDISLAFFETASMMRQVSHKHIVLLYGVCVR-DVEN   79 (262)
T ss_pred             CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhhhhHHHHHHHHHHHHHhCCCCCEeeEEEEEec-CCCC
Confidence            3689999999999986422            23689998866555556688999999999999999999999876 5678


Q ss_pred             EEEEeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCC-------eeee
Q 005257          438 MLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMN-------GRLG  510 (705)
Q Consensus       438 ~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~-------~kL~  510 (705)
                      ++||||+++|+|..++.....  .+++..+++++.|++.||+|||+   ++|+||||||+|||++.++.       +|++
T Consensus        80 ~lv~e~~~~~~l~~~~~~~~~--~~~~~~~~~i~~qi~~~l~~lH~---~~ivH~dlkp~Nill~~~~~~~~~~~~~~l~  154 (262)
T cd05077          80 IMVEEFVEFGPLDLFMHRKSD--VLTTPWKFKVAKQLASALSYLED---KDLVHGNVCTKNILLAREGIDGECGPFIKLS  154 (262)
T ss_pred             EEEEecccCCCHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHhhh---CCeECCCCCcccEEEecCCccCCCCceeEeC
Confidence            999999999999998865332  58999999999999999999998   99999999999999987664       8999


Q ss_pred             eeccceecCCCCcceeeeeeccccCCCccccc-cCCCCccccEEEEehhHHHHh-hCCCCCCCCCccHHHHHHHHHHhCc
Q 005257          511 DFGLARMHGHGQVASTTRVVGTVGYLAPEVFS-SGRASTQTDVFGFGILILEVL-SGRRPIEEGKPNLVEMVWELMVQGK  588 (705)
Q Consensus       511 DFGla~~~~~~~~~~~~~~~gt~~y~APE~~~-~~~~s~ksDVwS~Gvvl~Ell-tG~~Pf~~~~~~~~~~v~~~~~~~~  588 (705)
                      |||++......     ....++..|+|||.+. +..++.++|||||||++|||+ +|+.|+.........    ....+.
T Consensus       155 d~g~~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~----~~~~~~  225 (262)
T cd05077         155 DPGIPITVLSR-----QECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEICYNGEIPLKDKTLAEKE----RFYEGQ  225 (262)
T ss_pred             CCCCCccccCc-----ccccccccccChhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcchhHHH----HHHhcC
Confidence            99998754322     2245788999999986 466899999999999999997 588887653321110    011110


Q ss_pred             hhHHHHHhhhcCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHH
Q 005257          589 LLDALDARLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLE  637 (705)
Q Consensus       589 ~~~~id~~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  637 (705)
                              .    .........+.+++..||+.||++||++.++++.|+
T Consensus       226 --------~----~~~~~~~~~~~~li~~cl~~dp~~Rp~~~~il~~~~  262 (262)
T cd05077         226 --------C----MLVTPSCKELADLMTHCMNYDPNQRPFFRAIMRDIN  262 (262)
T ss_pred             --------c----cCCCCChHHHHHHHHHHcCCChhhCcCHHHHHHhcC
Confidence                    0    011112356789999999999999999999998764

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom

>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases

Probab=100.00  E-value=1.7e-36  Score=315.86  Aligned_cols=251  Identities=28%  Similarity=0.458  Sum_probs=197.4

Q ss_pred             eEEeecCceEEEEEEEcCCCe--EEEEEEeccCC-chhHHHHHHHHHHhccC-CCCCcceeeeeeeeccCceEEEEeeCC
Q 005257          370 NVIGVGGNGKVYKGVLEGGGA--EIAVKRISHEN-DGGTRAFLAEISSLGRL-KHKSLVGLRGWCKREKGSLMLVYDYME  445 (705)
Q Consensus       370 ~~LG~G~fg~Vy~~~~~~~~~--~vavK~i~~~~-~~~~~~~~~Ei~~l~~l-~Hpniv~l~g~~~~~~~~~~lV~E~~~  445 (705)
                      +.||+|+||.||+|.+.+++.  .+++|.++... ....+.+.+|++++.++ +||||++++++|.. .+..++||||++
T Consensus         1 ~~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~-~~~~~lv~e~~~   79 (270)
T cd05047           1 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEH-RGYLYLAIEYAP   79 (270)
T ss_pred             CcCCCCCCceEEEEEEcCCCCeeEEEEEEccccCCHHHHHHHHHHHHHHHhhccCCCeeeEEEEEec-CCCceEEEEeCC
Confidence            368999999999999987664  57888886443 34556789999999999 89999999998876 667899999999


Q ss_pred             CCChhHHHHhcC-------------CCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeee
Q 005257          446 NGSLDKWIFQCD-------------GSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDF  512 (705)
Q Consensus       446 ~gsL~~~L~~~~-------------~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DF  512 (705)
                      +|+|.+++....             ....+++.++..++.|++.||+|||+   .+++||||||+||++++++.+||+||
T Consensus        80 ~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~---~~i~H~dikp~nili~~~~~~kl~df  156 (270)
T cd05047          80 HGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQ---KQFIHRDLAARNILVGENYVAKIADF  156 (270)
T ss_pred             CCcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHH---CCEeecccccceEEEcCCCeEEECCC
Confidence            999999997532             11258899999999999999999998   99999999999999999999999999


Q ss_pred             ccceecCCCCcceeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhh-CCCCCCCCCccHHHHHHHHHHhCchhH
Q 005257          513 GLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLS-GRRPIEEGKPNLVEMVWELMVQGKLLD  591 (705)
Q Consensus       513 Gla~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~Ellt-G~~Pf~~~~~~~~~~v~~~~~~~~~~~  591 (705)
                      |+++......  .......+..|+|||++....++.++|||||||++|||++ |..||......   ........+    
T Consensus       157 gl~~~~~~~~--~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~---~~~~~~~~~----  227 (270)
T cd05047         157 GLSRGQEVYV--KKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCA---ELYEKLPQG----  227 (270)
T ss_pred             CCccccchhh--hccCCCCccccCChHHHccCCCCchhhHHHHHHHHHHHHcCCCCCccccCHH---HHHHHHhCC----
Confidence            9986332111  1111223567999999988889999999999999999997 99999654321   111111111    


Q ss_pred             HHHHhhhcCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHhcc
Q 005257          592 ALDARLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLEGKI  640 (705)
Q Consensus       592 ~id~~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~  640 (705)
                           ..  ...+......+.+++..||+.+|.+|||+.++++.|+.++
T Consensus       228 -----~~--~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l~~~~  269 (270)
T cd05047         228 -----YR--LEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRML  269 (270)
T ss_pred             -----CC--CCCCCcCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHhh
Confidence                 11  1112223456889999999999999999999999998654

Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l

>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron

Probab=100.00  E-value=1.9e-36  Score=313.39  Aligned_cols=252  Identities=28%  Similarity=0.426  Sum_probs=196.5

Q ss_pred             eEEeecCceEEEEEEEcC---CCeEEEEEEeccCC-chhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEEEEeeCC
Q 005257          370 NVIGVGGNGKVYKGVLEG---GGAEIAVKRISHEN-DGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYME  445 (705)
Q Consensus       370 ~~LG~G~fg~Vy~~~~~~---~~~~vavK~i~~~~-~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~lV~E~~~  445 (705)
                      +.||+|+||.||+|.+..   ....||+|++.... ....+.+.+|+.+++.++|||+++++++|...++..++|+||++
T Consensus         1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~~   80 (262)
T cd05058           1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPSEGSPLVVLPYMK   80 (262)
T ss_pred             CcccccCCceEEEEEEecCCCceEEEEEEecCccCCHHHHHHHHHHHHHHccCCCCCcceEEEEeecCCCCcEEEEecCC
Confidence            468999999999998753   34679999885433 34567889999999999999999999988765667899999999


Q ss_pred             CCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecCCCCc--
Q 005257          446 NGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQV--  523 (705)
Q Consensus       446 ~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~~~~~--  523 (705)
                      +|+|.+++.+...  .+++..+..++.|++.||.|||+   .+++||||||+|||+++++.+||+|||+++.......  
T Consensus        81 ~~~L~~~~~~~~~--~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dlk~~nili~~~~~~kl~dfg~~~~~~~~~~~~  155 (262)
T cd05058          81 HGDLRNFIRSETH--NPTVKDLIGFGLQVAKGMEYLAS---KKFVHRDLAARNCMLDESFTVKVADFGLARDIYDKEYYS  155 (262)
T ss_pred             CCCHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHh---CCccccccCcceEEEcCCCcEEECCccccccccCCccee
Confidence            9999999975432  46788889999999999999998   9999999999999999999999999999975533211  


Q ss_pred             -ceeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhhC-CCCCCCCCccHHHHHHHHHHhCchhHHHHHhhhcCC
Q 005257          524 -ASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSG-RRPIEEGKPNLVEMVWELMVQGKLLDALDARLRAKG  601 (705)
Q Consensus       524 -~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG-~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~l~~~~  601 (705)
                       .......++..|+|||.+.+..++.++|||||||++|||++| ..||.....  .+.. .....+..           .
T Consensus       156 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~--~~~~-~~~~~~~~-----------~  221 (262)
T cd05058         156 VHNHTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVDS--FDIT-VYLLQGRR-----------L  221 (262)
T ss_pred             ecccccCcCCccccChhHhccCccchHHHHHHHHHHHHHHHcCCCCCCCCCCH--HHHH-HHHhcCCC-----------C
Confidence             111123457789999999888899999999999999999995 455544321  1111 11111110           1


Q ss_pred             CCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHhcc
Q 005257          602 GFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLEGKI  640 (705)
Q Consensus       602 ~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~  640 (705)
                      ..+...+..+.+++..||+++|++||++.++++.|+...
T Consensus       222 ~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~il~~l~~~~  260 (262)
T cd05058         222 LQPEYCPDPLYEVMLSCWHPKPEMRPTFSELVSRIEQIF  260 (262)
T ss_pred             CCCCcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHh
Confidence            112223457889999999999999999999999998653

Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca

>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

Probab=100.00  E-value=2.6e-36  Score=316.41  Aligned_cols=252  Identities=23%  Similarity=0.326  Sum_probs=202.0

Q ss_pred             CCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCCchhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEEEEeeCC
Q 005257          366 FSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYME  445 (705)
Q Consensus       366 f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~lV~E~~~  445 (705)
                      |+..+.||+|+||.||+|....++..+++|.+........+.+.+|+++++.++|||++++++.+.. ++..++|+||++
T Consensus         7 ~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~-~~~~~~v~e~~~   85 (282)
T cd06643           7 WEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYY-ENNLWILIEFCA   85 (282)
T ss_pred             HHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCCCHHHHHHHHHHHHHHHHCCCCCeeeEEEEEee-CCEEEEEEEecC
Confidence            4556789999999999999998899999999976666667789999999999999999999998876 678899999999


Q ss_pred             CCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecCCCCcce
Q 005257          446 NGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVAS  525 (705)
Q Consensus       446 ~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~~~~~~~  525 (705)
                      +++|..++.+..  ..+++..+..++.|++.||.|||+   .+++||||||+||+++.++.+||+|||++........ .
T Consensus        86 ~~~l~~~~~~~~--~~l~~~~~~~~~~qi~~~L~~LH~---~~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~~-~  159 (282)
T cd06643          86 GGAVDAVMLELE--RPLTEPQIRVVCKQTLEALNYLHE---NKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQ-R  159 (282)
T ss_pred             CCcHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHH---CCeeecCCCcccEEEccCCCEEEcccccccccccccc-c
Confidence            999999886533  268999999999999999999998   9999999999999999999999999999876533221 2


Q ss_pred             eeeeeccccCCCccccc-----cCCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhHHHHHhhhcC
Q 005257          526 TTRVVGTVGYLAPEVFS-----SGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRAK  600 (705)
Q Consensus       526 ~~~~~gt~~y~APE~~~-----~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~l~~~  600 (705)
                      .....|+..|+|||++.     +..++.++|||||||++|||++|+.||......  +.+.... .+..     +.    
T Consensus       160 ~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~--~~~~~~~-~~~~-----~~----  227 (282)
T cd06643         160 RDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELNPM--RVLLKIA-KSEP-----PT----  227 (282)
T ss_pred             cccccccccccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCccccCHH--HHHHHHh-hcCC-----CC----
Confidence            22346899999999984     345788999999999999999999998764321  1111111 1100     00    


Q ss_pred             CCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Q 005257          601 GGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVL  636 (705)
Q Consensus       601 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L  636 (705)
                      ...+......+.+++..||+.+|++||++.+++++-
T Consensus       228 ~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~  263 (282)
T cd06643         228 LAQPSRWSSEFKDFLKKCLEKNVDARWTTTQLLQHP  263 (282)
T ss_pred             CCCccccCHHHHHHHHHHccCChhhCcCHHHHhcCC
Confidence            111222345688999999999999999999988753

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.

>PTZ00284 protein kinase; Provisional

Probab=100.00  E-value=1.3e-36  Score=341.93  Aligned_cols=265  Identities=22%  Similarity=0.277  Sum_probs=197.5

Q ss_pred             HHHHHhCCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCCchhHHHHHHHHHHhccCCC------CCcceeeeeee
Q 005257          358 EIEAATKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLKH------KSLVGLRGWCK  431 (705)
Q Consensus       358 el~~at~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~~~~~~~~~Ei~~l~~l~H------pniv~l~g~~~  431 (705)
                      ++...+++|...++||+|+||+||+|.+..+++.||||+++... ...+++..|+.++++++|      ++++++++++.
T Consensus       123 ~~~~~~~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~~  201 (467)
T PTZ00284        123 DIDVSTQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVP-KYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYFQ  201 (467)
T ss_pred             ccccCCCcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecch-hhHHHHHHHHHHHHHHhhcCcccCcceeeeEEEEE
Confidence            34445688999999999999999999999889999999986432 233455667777766654      45888888887


Q ss_pred             eccCceEEEEeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCC------
Q 005257          432 REKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEM------  505 (705)
Q Consensus       432 ~~~~~~~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~------  505 (705)
                      .+...+++|||++ +++|.+++.+..   .+++.++..|+.||+.||.|||+  +.+||||||||+|||++.++      
T Consensus       202 ~~~~~~~iv~~~~-g~~l~~~l~~~~---~l~~~~~~~i~~qi~~aL~yLH~--~~gIiHrDlKP~NILl~~~~~~~~~~  275 (467)
T PTZ00284        202 NETGHMCIVMPKY-GPCLLDWIMKHG---PFSHRHLAQIIFQTGVALDYFHT--ELHLMHTDLKPENILMETSDTVVDPV  275 (467)
T ss_pred             cCCceEEEEEecc-CCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHh--cCCeecCCCCHHHEEEecCCcccccc
Confidence            6667889999998 678988886543   68999999999999999999996  25999999999999998765      


Q ss_pred             ----------CeeeeeeccceecCCCCcceeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhhCCCCCCCCCcc
Q 005257          506 ----------NGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPN  575 (705)
Q Consensus       506 ----------~~kL~DFGla~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~  575 (705)
                                .+||+|||++.....    .....+||+.|||||++.+..++.++|||||||++|||++|+.||......
T Consensus       276 ~~~~~~~~~~~vkl~DfG~~~~~~~----~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~  351 (467)
T PTZ00284        276 TNRALPPDPCRVRICDLGGCCDERH----SRTAIVSTRHYRSPEVVLGLGWMYSTDMWSMGCIIYELYTGKLLYDTHDNL  351 (467)
T ss_pred             cccccCCCCceEEECCCCccccCcc----ccccccCCccccCcHHhhcCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChH
Confidence                      499999998864322    223468999999999999999999999999999999999999999764421


Q ss_pred             -HHHHHHHHHHhCchhHHH-------------HHhhhcCCCCC---------------HHHHHHHHHHHHHcCCCCCCCC
Q 005257          576 -LVEMVWELMVQGKLLDAL-------------DARLRAKGGFD---------------EDEVERVLHLGLLCAYPDPRAR  626 (705)
Q Consensus       576 -~~~~v~~~~~~~~~~~~i-------------d~~l~~~~~~~---------------~~~~~~l~~l~~~Cl~~dP~~R  626 (705)
                       ....+..  ..|.+...+             +..........               ......+.+|+..||+.||++|
T Consensus       352 ~~~~~i~~--~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R  429 (467)
T PTZ00284        352 EHLHLMEK--TLGRLPSEWAGRCGTEEARLLYNSAGQLRPCTDPKHLARIARARPVREVIRDDLLCDLIYGLLHYDRQKR  429 (467)
T ss_pred             HHHHHHHH--HcCCCCHHHHhhccchhHHHHhhhcccccccCCHHHHHhhhcccchhhhhchHHHHHHHHHhCCcChhhC
Confidence             1111100  011111100             00000000000               0112457799999999999999


Q ss_pred             CCHHHHHHH
Q 005257          627 PTMRQVVKV  635 (705)
Q Consensus       627 Ps~~evl~~  635 (705)
                      ||++|++++
T Consensus       430 ~ta~e~L~H  438 (467)
T PTZ00284        430 LNARQMTTH  438 (467)
T ss_pred             CCHHHHhcC
Confidence            999999973

>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity

Probab=100.00  E-value=8.2e-37  Score=315.18  Aligned_cols=254  Identities=28%  Similarity=0.458  Sum_probs=202.6

Q ss_pred             CCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCCchhHH--HHHHHHHHhccCCCCCcceeeeeeeeccCceEEEEee
Q 005257          366 FSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTR--AFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDY  443 (705)
Q Consensus       366 f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~~~~~--~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~lV~E~  443 (705)
                      |+..+.||+|+||+||++....+++.+|+|++.........  ...+|+.++++++||||+++++++.. +...++||||
T Consensus         1 y~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~-~~~~~~v~~~   79 (260)
T PF00069_consen    1 YRLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEEREENIREIKILRRLRHPNIVQILDVFQD-DNYLYIVMEY   79 (260)
T ss_dssp             EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTBTTBCHEEEEEEE-SSEEEEEEEE
T ss_pred             CEEeEEEEeCCCEEEEEEEECCCCeEEEEEEeccccccccccchhhhhhhccccccccccccccccccc-cccccccccc
Confidence            45678999999999999999999999999999876543322  34569999999999999999999887 7788999999


Q ss_pred             CCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecCCCCc
Q 005257          444 MENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQV  523 (705)
Q Consensus       444 ~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~~~~~  523 (705)
                      +++++|.+++....   .+++.++..++.|+++||.+||+   .+++|+||||+||+++.++.++|+|||.+..... ..
T Consensus        80 ~~~~~L~~~l~~~~---~~~~~~~~~~~~qi~~~L~~Lh~---~~i~H~dikp~NIl~~~~~~~~l~Dfg~~~~~~~-~~  152 (260)
T PF00069_consen   80 CPGGSLQDYLQKNK---PLSEEEILKIAYQILEALAYLHS---KGIVHRDIKPENILLDENGEVKLIDFGSSVKLSE-NN  152 (260)
T ss_dssp             ETTEBHHHHHHHHS---SBBHHHHHHHHHHHHHHHHHHHH---TTEEESSBSGGGEEESTTSEEEESSGTTTEESTS-TT
T ss_pred             cccccccccccccc---ccccccccccccccccccccccc---cccccccccccccccccccccccccccccccccc-cc
Confidence            99999999997332   68999999999999999999999   9999999999999999999999999999986421 22


Q ss_pred             ceeeeeeccccCCCccccc-cCCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhHHHHHhhhcCCC
Q 005257          524 ASTTRVVGTVGYLAPEVFS-SGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRAKGG  602 (705)
Q Consensus       524 ~~~~~~~gt~~y~APE~~~-~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~l~~~~~  602 (705)
                      .......++..|+|||++. +..++.++||||+|+++|||++|+.||...................    .....    .
T Consensus       153 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~~~~~~~~~~~~~~~~~~----~~~~~----~  224 (260)
T PF00069_consen  153 ENFNPFVGTPEYMAPEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFEESNSDDQLEIIEKILKRP----LPSSS----Q  224 (260)
T ss_dssp             SEBSSSSSSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTTSSHHHHHHHHHHHHHTH----HHHHT----T
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccccccccccchhhhhhhhhccccc----ccccc----c
Confidence            2333457899999999998 7889999999999999999999999998652111111111111111    11111    0


Q ss_pred             CCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 005257          603 FDEDEVERVLHLGLLCAYPDPRARPTMRQVVKV  635 (705)
Q Consensus       603 ~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  635 (705)
                      ........+.+++..||+.||++||++.+++++
T Consensus       225 ~~~~~~~~l~~li~~~l~~~p~~R~~~~~l~~~  257 (260)
T PF00069_consen  225 QSREKSEELRDLIKKMLSKDPEQRPSAEELLKH  257 (260)
T ss_dssp             SHTTSHHHHHHHHHHHSSSSGGGSTTHHHHHTS
T ss_pred             ccchhHHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence            011113788999999999999999999998863

Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....

>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer

Probab=100.00  E-value=2e-36  Score=311.08  Aligned_cols=247  Identities=26%  Similarity=0.442  Sum_probs=198.6

Q ss_pred             eEEeecCceEEEEEEEcCCCeEEEEEEeccCCc-hhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEEEEeeCCCCC
Q 005257          370 NVIGVGGNGKVYKGVLEGGGAEIAVKRISHEND-GGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGS  448 (705)
Q Consensus       370 ~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~-~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~lV~E~~~~gs  448 (705)
                      ++||+|+||.||+|... ++..+|+|++..... .....+.+|++++++++||||++++++|.. .+..++||||+++++
T Consensus         1 ~~ig~g~~g~vy~~~~~-~~~~~a~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~lv~e~~~~~~   78 (250)
T cd05085           1 ELLGKGNFGEVFKGTLK-DKTPVAVKTCKEDLPQELKIKFLSEARILKQYDHPNIVKLIGVCTQ-RQPIYIVMELVPGGD   78 (250)
T ss_pred             CccCCCCCceEEEEEec-CCcEEEEEecCCcCCHHHHHHHHHHHHHHHhCCCCCcCeEEEEEec-CCccEEEEECCCCCc
Confidence            36899999999999876 578899999876543 234578999999999999999999999876 567899999999999


Q ss_pred             hhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecCCCCcceeee
Q 005257          449 LDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTR  528 (705)
Q Consensus       449 L~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~~~~~~~~~~  528 (705)
                      |.+++.....  .+++..+..++.|++.+|.|||+   ++++||||||+||+++.++.+||+|||+++............
T Consensus        79 L~~~~~~~~~--~~~~~~~~~~~~~i~~~l~~lH~---~~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~  153 (250)
T cd05085          79 FLSFLRKKKD--ELKTKQLVKFALDAAAGMAYLES---KNCIHRDLAARNCLVGENNVLKISDFGMSRQEDDGIYSSSGL  153 (250)
T ss_pred             HHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHh---CCeeecccChheEEEcCCCeEEECCCccceeccccccccCCC
Confidence            9999865432  58899999999999999999998   999999999999999999999999999997654332222222


Q ss_pred             eeccccCCCccccccCCCCccccEEEEehhHHHHhh-CCCCCCCCCccHHHHHHHHHHhCchhHHHHHhhhcCCCCCHHH
Q 005257          529 VVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLS-GRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRAKGGFDEDE  607 (705)
Q Consensus       529 ~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~Ellt-G~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~l~~~~~~~~~~  607 (705)
                      ..++..|+|||++.+..++.++||||||+++||+++ |..||......   ........+.         .  ...+...
T Consensus       154 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~~~---~~~~~~~~~~---------~--~~~~~~~  219 (250)
T cd05085         154 KQIPIKWTAPEALNYGRYSSESDVWSYGILLWETFSLGVCPYPGMTNQ---QAREQVEKGY---------R--MSCPQKC  219 (250)
T ss_pred             CCCcccccCHHHhccCCCCchhHHHHHHHHHHHHhcCCCCCCCCCCHH---HHHHHHHcCC---------C--CCCCCCC
Confidence            234677999999988889999999999999999998 99999754321   1111111111         1  1122234


Q ss_pred             HHHHHHHHHHcCCCCCCCCCCHHHHHHHHH
Q 005257          608 VERVLHLGLLCAYPDPRARPTMRQVVKVLE  637 (705)
Q Consensus       608 ~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  637 (705)
                      ...+.+++.+|++.+|++||++.++++.|.
T Consensus       220 ~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~  249 (250)
T cd05085         220 PDDVYKVMQRCWDYKPENRPKFSELQKELA  249 (250)
T ss_pred             CHHHHHHHHHHcccCcccCCCHHHHHHHhc
Confidence            567899999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c

>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2

Probab=100.00  E-value=1.2e-36  Score=331.04  Aligned_cols=203  Identities=26%  Similarity=0.345  Sum_probs=176.1

Q ss_pred             CCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccC---CchhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEEE
Q 005257          364 KGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHE---NDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLV  440 (705)
Q Consensus       364 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~---~~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~lV  440 (705)
                      ++|+..+.||+|+||.||++....+++.||||+++..   .......+.+|+.++..++||||+++++.+.. ++.+++|
T Consensus         1 ~~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~-~~~~~lv   79 (360)
T cd05627           1 DDFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSFQD-KRNLYLI   79 (360)
T ss_pred             CCceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEc-CCEEEEE
Confidence            3688899999999999999999999999999998643   23345678889999999999999999998875 6789999


Q ss_pred             EeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecCC
Q 005257          441 YDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGH  520 (705)
Q Consensus       441 ~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~~  520 (705)
                      |||+++|+|.+++.+..   .+++..+..++.|++.||.|||+   ++|+||||||+|||++.++.+||+|||+++....
T Consensus        80 ~E~~~gg~L~~~l~~~~---~l~~~~~~~~~~qi~~~L~~lH~---~givHrDLkp~NIli~~~~~vkL~DfG~~~~~~~  153 (360)
T cd05627          80 MEFLPGGDMMTLLMKKD---TLSEEATQFYIAETVLAIDAIHQ---LGFIHRDIKPDNLLLDAKGHVKLSDFGLCTGLKK  153 (360)
T ss_pred             EeCCCCccHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHH---CCeEccCCCHHHEEECCCCCEEEeeccCCccccc
Confidence            99999999999997543   68999999999999999999998   9999999999999999999999999999875432


Q ss_pred             CCc----------------------------------ceeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhhCC
Q 005257          521 GQV----------------------------------ASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGR  566 (705)
Q Consensus       521 ~~~----------------------------------~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~  566 (705)
                      ...                                  ......+||+.|+|||++.+..++.++|||||||++|||++|+
T Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvilyel~tG~  233 (360)
T cd05627         154 AHRTEFYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGY  233 (360)
T ss_pred             ccccccccccccCCcccccccccccccccccccccccccccccCCCccccCHHHHcCCCCCCcceeccccceeeecccCC
Confidence            110                                  0012347999999999999989999999999999999999999


Q ss_pred             CCCCCCC
Q 005257          567 RPIEEGK  573 (705)
Q Consensus       567 ~Pf~~~~  573 (705)
                      .||....
T Consensus       234 ~Pf~~~~  240 (360)
T cd05627         234 PPFCSET  240 (360)
T ss_pred             CCCCCCC
Confidence            9997654

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul

>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases

Probab=100.00  E-value=4e-36  Score=309.61  Aligned_cols=250  Identities=31%  Similarity=0.504  Sum_probs=205.6

Q ss_pred             eEEeecCceEEEEEEEcCC---CeEEEEEEeccCCch-hHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEEEEeeCC
Q 005257          370 NVIGVGGNGKVYKGVLEGG---GAEIAVKRISHENDG-GTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYME  445 (705)
Q Consensus       370 ~~LG~G~fg~Vy~~~~~~~---~~~vavK~i~~~~~~-~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~lV~E~~~  445 (705)
                      +.||+|+||.||+|.....   +..|++|.++..... ..+.+.+|++++..++|+|++++++++.. +...++||||++
T Consensus         1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~-~~~~~lv~e~~~   79 (262)
T cd00192           1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVRLLGVCTE-EEPLYLVLEYME   79 (262)
T ss_pred             CccccCCceEEEEEEEecCCCCCceEEeEeeccccchhHHHHHHHHHHHHhhcCCCChheeeeeecC-CCceEEEEEecc
Confidence            4699999999999999865   889999999766443 36789999999999999999999998886 778999999999


Q ss_pred             CCChhHHHHhcCC------CCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecC
Q 005257          446 NGSLDKWIFQCDG------SMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHG  519 (705)
Q Consensus       446 ~gsL~~~L~~~~~------~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~  519 (705)
                      +++|.+++.....      ...+++.+++.++.|++.||.|||+   .+++|+||||+||++++++.+||+|||.++...
T Consensus        80 ~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~---~~i~H~di~p~nili~~~~~~~l~dfg~~~~~~  156 (262)
T cd00192          80 GGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLAS---KKFVHRDLAARNCLVGEDLVVKISDFGLSRDVY  156 (262)
T ss_pred             CCcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHc---CCcccCccCcceEEECCCCcEEEcccccccccc
Confidence            9999999976521      2479999999999999999999998   999999999999999999999999999998765


Q ss_pred             CCCc-ceeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhh-CCCCCCCCCccHHHHHHHHHHhCchhHHHHHhh
Q 005257          520 HGQV-ASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLS-GRRPIEEGKPNLVEMVWELMVQGKLLDALDARL  597 (705)
Q Consensus       520 ~~~~-~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~Ellt-G~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~l  597 (705)
                      .... .......++..|+|||.+....++.++||||+||++|||++ |..||.....   ..+.+....+..        
T Consensus       157 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~---~~~~~~~~~~~~--------  225 (262)
T cd00192         157 DDDYYRKKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPGLSN---EEVLEYLRKGYR--------  225 (262)
T ss_pred             cccccccccCCCcCccccCHHHhccCCcchhhccHHHHHHHHHHHhcCCCCCCCCCH---HHHHHHHHcCCC--------
Confidence            4321 12223457889999999988889999999999999999999 6999976532   122222222111        


Q ss_pred             hcCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHH
Q 005257          598 RAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLE  637 (705)
Q Consensus       598 ~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  637 (705)
                         ...+......+.+++..||+.+|++|||+.++++.|+
T Consensus       226 ---~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~  262 (262)
T cd00192         226 ---LPKPEYCPDELYELMLSCWQLDPEDRPTFSELVERLE  262 (262)
T ss_pred             ---CCCCccCChHHHHHHHHHccCCcccCcCHHHHHHhhC
Confidence               1223334567889999999999999999999999874

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan

>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases

Probab=100.00  E-value=2.1e-36  Score=313.00  Aligned_cols=255  Identities=29%  Similarity=0.498  Sum_probs=206.4

Q ss_pred             hCCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCCchhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEEEEe
Q 005257          363 TKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYD  442 (705)
Q Consensus       363 t~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~lV~E  442 (705)
                      .++|...+.||+|+||.||+|.+++ +..+|||.+.... ...+++.+|+.++++++||||+++++++.. ....++|||
T Consensus         5 ~~~~~i~~~ig~g~~~~v~~~~~~~-~~~~~vK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~~v~e   81 (261)
T cd05034           5 RESLKLERKLGAGQFGEVWMGTWNG-TTKVAVKTLKPGT-MSPEAFLQEAQIMKKLRHDKLVQLYAVCSE-EEPIYIVTE   81 (261)
T ss_pred             hhheeeeeeeccCcceEEEEEEEcC-CceEEEEEecCCc-cCHHHHHHHHHHHhhCCCCCEeeeeeeeec-CCceEEEEe
Confidence            4678889999999999999999864 5779999986433 345779999999999999999999998865 567899999


Q ss_pred             eCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecCCCC
Q 005257          443 YMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQ  522 (705)
Q Consensus       443 ~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~~~~  522 (705)
                      |+++++|.+++...... .+++.++..++.|++.||.|||+   .+++|+||||+||++++++.+||+|||++.......
T Consensus        82 ~~~~~~L~~~i~~~~~~-~~~~~~~~~~~~~i~~al~~lh~---~~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~  157 (261)
T cd05034          82 YMSKGSLLDFLKSGEGK-KLRLPQLVDMAAQIAEGMAYLES---RNYIHRDLAARNILVGENLVCKIADFGLARLIEDDE  157 (261)
T ss_pred             ccCCCCHHHHHhccccC-CCCHHHHHHHHHHHHHHHHHHHh---CCcccCCcchheEEEcCCCCEEECccccceeccchh
Confidence            99999999999765433 68999999999999999999998   899999999999999999999999999998765432


Q ss_pred             cceeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhh-CCCCCCCCCccHHHHHHHHHHhCchhHHHHHhhhcCC
Q 005257          523 VASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLS-GRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRAKG  601 (705)
Q Consensus       523 ~~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~Ellt-G~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~l~~~~  601 (705)
                      ........++..|+|||.+.+..++.++|||||||++|||++ |+.||.....   ......+..+         ..  .
T Consensus       158 ~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~---~~~~~~~~~~---------~~--~  223 (261)
T cd05034         158 YTAREGAKFPIKWTAPEAANYGRFTIKSDVWSFGILLTEIVTYGRVPYPGMTN---REVLEQVERG---------YR--M  223 (261)
T ss_pred             hhhhhccCCCccccCHHHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCH---HHHHHHHHcC---------CC--C
Confidence            222222334678999999998889999999999999999998 9999965432   1111111111         11  1


Q ss_pred             CCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHh
Q 005257          602 GFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLEG  638 (705)
Q Consensus       602 ~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  638 (705)
                      ..+......+.+++.+|++.+|++||+++++.+.|+.
T Consensus       224 ~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~l~~  260 (261)
T cd05034         224 PRPPNCPEELYDLMLQCWDKDPEERPTFEYLQSFLED  260 (261)
T ss_pred             CCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHHhc
Confidence            1122235678999999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t

>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

Probab=100.00  E-value=2.5e-36  Score=319.29  Aligned_cols=251  Identities=23%  Similarity=0.372  Sum_probs=206.2

Q ss_pred             CCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCCchhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEEEEee
Q 005257          364 KGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDY  443 (705)
Q Consensus       364 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~lV~E~  443 (705)
                      .+|+..+.||+|++|.||+|+...++..||+|.+........+.+.+|+.+++.++|||++++++.+.. ....++||||
T Consensus        20 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~v~~~~~~~~~-~~~~~lv~e~   98 (296)
T cd06654          20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLV-GDELWVVMEY   98 (296)
T ss_pred             cceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCcchHHHHHHHHHHHHhCCCCCEeeEEEEEEe-CCEEEEeecc
Confidence            578889999999999999999988899999999977665566788999999999999999999998876 6689999999


Q ss_pred             CCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecCCCCc
Q 005257          444 MENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQV  523 (705)
Q Consensus       444 ~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~~~~~  523 (705)
                      +++++|.+++.+.    .+++.++..++.|++.||.|||+   .+++||||||+||+++.++.+||+|||++........
T Consensus        99 ~~~~~L~~~~~~~----~~~~~~~~~i~~ql~~aL~~LH~---~gi~H~dLkp~Nill~~~~~~kl~dfg~~~~~~~~~~  171 (296)
T cd06654          99 LAGGSLTDVVTET----CMDEGQIAAVCRECLQALEFLHS---NQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS  171 (296)
T ss_pred             cCCCCHHHHHHhc----CCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEEcCCCCEEECccccchhcccccc
Confidence            9999999998542    57899999999999999999998   9999999999999999999999999999876543322


Q ss_pred             ceeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhHHHHHhhhcCCCC
Q 005257          524 ASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRAKGGF  603 (705)
Q Consensus       524 ~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~l~~~~~~  603 (705)
                      . .....|++.|+|||.+.+..++.++|||||||++|||++|+.||....+.  .........+..      .    ...
T Consensus       172 ~-~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~--~~~~~~~~~~~~------~----~~~  238 (296)
T cd06654         172 K-RSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPL--RALYLIATNGTP------E----LQN  238 (296)
T ss_pred             c-cCcccCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHH--HhHHHHhcCCCC------C----CCC
Confidence            1 12346889999999998888999999999999999999999999764431  111111111100      0    111


Q ss_pred             CHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 005257          604 DEDEVERVLHLGLLCAYPDPRARPTMRQVVKV  635 (705)
Q Consensus       604 ~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  635 (705)
                      +......+.+++.+||..+|++||++.++++.
T Consensus       239 ~~~~~~~l~~li~~~l~~~p~~Rpt~~eil~~  270 (296)
T cd06654         239 PEKLSAIFRDFLNRCLDMDVEKRGSAKELLQH  270 (296)
T ss_pred             ccccCHHHHHHHHHHCcCCcccCcCHHHHhhC
Confidence            22344568889999999999999999999984

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>PTZ00036 glycogen synthase kinase; Provisional

Probab=100.00  E-value=1.9e-36  Score=337.69  Aligned_cols=262  Identities=20%  Similarity=0.290  Sum_probs=195.5

Q ss_pred             HhCCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCCchhHHHHHHHHHHhccCCCCCcceeeeeeeec-------c
Q 005257          362 ATKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKRE-------K  434 (705)
Q Consensus       362 at~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~-------~  434 (705)
                      ..++|...+.||+|+||.||+|....+++.||||++....    ....+|+.+++.++||||+++++++...       .
T Consensus        64 ~~~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~----~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~~~  139 (440)
T PTZ00036         64 PNKSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDP----QYKNRELLIMKNLNHINIIFLKDYYYTECFKKNEKN  139 (440)
T ss_pred             cCCeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecCc----chHHHHHHHHHhcCCCCCcceeeeEeecccccCCCc
Confidence            3467999999999999999999999889999999885432    2345799999999999999998876421       1


Q ss_pred             CceEEEEeeCCCCChhHHHHhc-CCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCC-Ceeeeee
Q 005257          435 GSLMLVYDYMENGSLDKWIFQC-DGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEM-NGRLGDF  512 (705)
Q Consensus       435 ~~~~lV~E~~~~gsL~~~L~~~-~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~-~~kL~DF  512 (705)
                      ..+++||||+++ +|.+++... .....+++..+..++.||+.||.|||+   .+|+||||||+|||++.++ .+||+||
T Consensus       140 ~~l~lvmE~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~---~~IiHrDLKp~NILl~~~~~~vkL~DF  215 (440)
T PTZ00036        140 IFLNVVMEFIPQ-TVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHS---KFICHRDLKPQNLLIDPNTHTLKLCDF  215 (440)
T ss_pred             eEEEEEEecCCc-cHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHH---CCEecCCcCHHHEEEcCCCCceeeecc
Confidence            246789999975 777776542 223368999999999999999999998   9999999999999999664 6999999


Q ss_pred             ccceecCCCCcceeeeeeccccCCCcccccc-CCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHH-hCch-
Q 005257          513 GLARMHGHGQVASTTRVVGTVGYLAPEVFSS-GRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMV-QGKL-  589 (705)
Q Consensus       513 Gla~~~~~~~~~~~~~~~gt~~y~APE~~~~-~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~-~~~~-  589 (705)
                      |+++.......  .....||+.|+|||++.+ ..++.++|||||||++|||++|..||.+....  +.+...+. .+.. 
T Consensus       216 Gla~~~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~--~~~~~i~~~~~~p~  291 (440)
T PTZ00036        216 GSAKNLLAGQR--SVSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSGQSSV--DQLVRIIQVLGTPT  291 (440)
T ss_pred             ccchhccCCCC--cccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChH--HHHHHHHHHhCCCC
Confidence            99986644322  223578999999999865 46899999999999999999999999765421  11111111 1110 


Q ss_pred             hHHH---HHhhh-----cC------CCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 005257          590 LDAL---DARLR-----AK------GGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKV  635 (705)
Q Consensus       590 ~~~i---d~~l~-----~~------~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  635 (705)
                      .+.+   .+...     ..      ..++......+.+++..||+.||.+|||+.|++++
T Consensus       292 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~li~~~L~~dP~~R~ta~e~l~h  351 (440)
T PTZ00036        292 EDQLKEMNPNYADIKFPDVKPKDLKKVFPKGTPDDAINFISQFLKYEPLKRLNPIEALAD  351 (440)
T ss_pred             HHHHHHhchhhhcccCCccCchhHHHHhccCCCHHHHHHHHHHCCCChhHCcCHHHHhCC
Confidence            0000   00000     00      00111223568899999999999999999999864

>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

Probab=100.00  E-value=1.9e-36  Score=317.81  Aligned_cols=266  Identities=24%  Similarity=0.346  Sum_probs=208.4

Q ss_pred             cCHHHHHHHhCCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCCchhHHHHHHHHHHhccC-CCCCcceeeeeeee
Q 005257          354 ITYQEIEAATKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRL-KHKSLVGLRGWCKR  432 (705)
Q Consensus       354 ~~~~el~~at~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~~~~~~~~~Ei~~l~~l-~Hpniv~l~g~~~~  432 (705)
                      +.++.+..+.++|+..+.||+|+||.||++....+++.+|+|++.... .....+.+|+.++.++ +||||+++++++..
T Consensus         8 ~~~~~~~~~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~-~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~   86 (286)
T cd06638           8 IIFDSFPDPSDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIH-DIDEEIEAEYNILKALSDHPNVVKFYGMYYK   86 (286)
T ss_pred             EEeecCCCcccceeeeeeeccCCCcEEEEEEECCCCceeEEEeecccc-chHHHHHHHHHHHHHHhcCCCeeeeeeeeee
Confidence            455667778899999999999999999999999889999999875432 2345688899999999 69999999998752


Q ss_pred             ----ccCceEEEEeeCCCCChhHHHHhc-CCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCe
Q 005257          433 ----EKGSLMLVYDYMENGSLDKWIFQC-DGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNG  507 (705)
Q Consensus       433 ----~~~~~~lV~E~~~~gsL~~~L~~~-~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~  507 (705)
                          .++..++||||+++++|.+++... .....+++..+..++.|++.||.|||+   .+++||||||+||++++++.+
T Consensus        87 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dlkp~nili~~~~~~  163 (286)
T cd06638          87 KDVKNGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHV---NKTIHRDVKGNNILLTTEGGV  163 (286)
T ss_pred             cccCCCCeEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHh---CCccccCCCHHhEEECCCCCE
Confidence                235689999999999999988642 223368999999999999999999998   999999999999999999999


Q ss_pred             eeeeeccceecCCCCcceeeeeeccccCCCcccccc-----CCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHH
Q 005257          508 RLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSS-----GRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWE  582 (705)
Q Consensus       508 kL~DFGla~~~~~~~~~~~~~~~gt~~y~APE~~~~-----~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~  582 (705)
                      ||+|||+++........ .....|++.|+|||++..     ..++.++|||||||++|||++|+.||......  .....
T Consensus       164 kl~dfg~~~~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~g~~p~~~~~~~--~~~~~  240 (286)
T cd06638         164 KLVDFGVSAQLTSTRLR-RNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPLADLHPM--RALFK  240 (286)
T ss_pred             EEccCCceeecccCCCc-cccccCCCcccChhhhchhhhccccccchhhhhhHHHHHHHHhcCCCCCCCCchh--HHHhh
Confidence            99999999866433222 223468999999999853     45788999999999999999999999764321  11000


Q ss_pred             HHHhCchhHHHHHhhhcCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Q 005257          583 LMVQGKLLDALDARLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVL  636 (705)
Q Consensus       583 ~~~~~~~~~~id~~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L  636 (705)
                       ...+.     ...+    ..+......+..++.+||+.||++||++.|+++.+
T Consensus       241 -~~~~~-----~~~~----~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~~  284 (286)
T cd06638         241 -IPRNP-----PPTL----HQPELWSNEFNDFIRKCLTKDYEKRPTVSDLLQHV  284 (286)
T ss_pred             -ccccC-----CCcc----cCCCCcCHHHHHHHHHHccCCcccCCCHHHHhhcc
Confidence             00000     0000    01111234688999999999999999999998753

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear

>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases

Probab=100.00  E-value=2.5e-36  Score=318.96  Aligned_cols=262  Identities=24%  Similarity=0.375  Sum_probs=201.2

Q ss_pred             CCCCcceEEeecCceEEEEEEEcCC--------------CeEEEEEEeccCC-chhHHHHHHHHHHhccCCCCCcceeee
Q 005257          364 KGFSEENVIGVGGNGKVYKGVLEGG--------------GAEIAVKRISHEN-DGGTRAFLAEISSLGRLKHKSLVGLRG  428 (705)
Q Consensus       364 ~~f~~~~~LG~G~fg~Vy~~~~~~~--------------~~~vavK~i~~~~-~~~~~~~~~Ei~~l~~l~Hpniv~l~g  428 (705)
                      ++|+..+.||+|+||.||++...+.              ...||+|.++... ......+.+|++++.+++|||++++++
T Consensus         5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~   84 (295)
T cd05097           5 QQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDFLKEIKIMSRLKNPNIIRLLG   84 (295)
T ss_pred             HhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCcCeEEE
Confidence            5788899999999999999987542              2359999987543 334567999999999999999999999


Q ss_pred             eeeeccCceEEEEeeCCCCChhHHHHhcCC---------CCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCe
Q 005257          429 WCKREKGSLMLVYDYMENGSLDKWIFQCDG---------SMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNV  499 (705)
Q Consensus       429 ~~~~~~~~~~lV~E~~~~gsL~~~L~~~~~---------~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NI  499 (705)
                      ++.. ....++||||+++++|.+++.....         ...+++..++.++.|++.||+|||+   .+++||||||+||
T Consensus        85 ~~~~-~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~---~~i~H~dlkp~Ni  160 (295)
T cd05097          85 VCVS-DDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLAS---LNFVHRDLATRNC  160 (295)
T ss_pred             EEcC-CCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHh---cCeeccccChhhE
Confidence            9876 6788999999999999999965321         1247889999999999999999998   9999999999999


Q ss_pred             EEccCCCeeeeeeccceecCCCCcc-eeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhh--CCCCCCCCCcc-
Q 005257          500 LLDKEMNGRLGDFGLARMHGHGQVA-STTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLS--GRRPIEEGKPN-  575 (705)
Q Consensus       500 Lld~~~~~kL~DFGla~~~~~~~~~-~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~Ellt--G~~Pf~~~~~~-  575 (705)
                      ++++++.+||+|||+++........ ......++..|+|||++.++.++.++|||||||++|||++  |..||...... 
T Consensus       161 ll~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~~l~el~~~~~~~p~~~~~~~~  240 (295)
T cd05097         161 LVGNHYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEMFTLCKEQPYSLLSDEQ  240 (295)
T ss_pred             EEcCCCcEEecccccccccccCcceeccCcCcCceeecChhhhccCCcCchhhHHHHHHHHHHHHHcCCCCCCcccChHH
Confidence            9999999999999999765432211 1122345678999999988889999999999999999988  56677653321 


Q ss_pred             HHHHHHHHHHhCchhHHHHHhhhcCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHH
Q 005257          576 LVEMVWELMVQGKLLDALDARLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLE  637 (705)
Q Consensus       576 ~~~~v~~~~~~~~~~~~id~~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  637 (705)
                      ......+....      ......  ...+...+..+.+++.+||+.+|++||++.+|++.|+
T Consensus       241 ~~~~~~~~~~~------~~~~~~--~~~~~~~~~~l~~li~~~l~~~p~~RPs~~~i~~~l~  294 (295)
T cd05097         241 VIENTGEFFRN------QGRQIY--LSQTPLCPSPVFKLMMRCWSRDIKDRPTFNKIHHFLR  294 (295)
T ss_pred             HHHHHHHhhhh------cccccc--CCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHh
Confidence            11111110000      000000  1112223467999999999999999999999999886

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including

>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

Probab=100.00  E-value=2.7e-36  Score=311.44  Aligned_cols=249  Identities=32%  Similarity=0.473  Sum_probs=205.1

Q ss_pred             CCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCCchhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEEEEee
Q 005257          364 KGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDY  443 (705)
Q Consensus       364 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~lV~E~  443 (705)
                      ++|...+.||+|+||.||+|...  ++.||+|.+..... ..+++.+|+.++++++|+||+++++++.. ....++||||
T Consensus         6 ~~~~~~~~ig~g~~g~v~~~~~~--~~~v~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~~~v~e~   81 (256)
T cd05039           6 KELKLGATIGKGEFGDVMLGDYR--GQKVAVKCLKDDST-AAQAFLAEASVMTTLRHPNLVQLLGVVLQ-GNPLYIVTEY   81 (256)
T ss_pred             hhccceeeeecCCCceEEEEEec--CcEEEEEEeccchh-HHHHHHHHHHHHHhcCCcceeeeEEEEcC-CCCeEEEEEe
Confidence            46788899999999999999875  68899999976544 56789999999999999999999998876 6788999999


Q ss_pred             CCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecCCCCc
Q 005257          444 MENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQV  523 (705)
Q Consensus       444 ~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~~~~~  523 (705)
                      +++++|.+++...... .+++..+..++.|++.||.|||+   .+++|+||||+||+++.++.+||+|||+++.......
T Consensus        82 ~~~~~L~~~~~~~~~~-~~~~~~~~~~~~qi~~~l~~lh~---~~i~H~di~p~Nili~~~~~~~l~d~g~~~~~~~~~~  157 (256)
T cd05039          82 MAKGSLVDYLRSRGRA-VITLAQQLGFALDVCEGMEYLEE---KNFVHRDLAARNVLVSEDLVAKVSDFGLAKEASQGQD  157 (256)
T ss_pred             cCCCcHHHHHHhcCCC-CCCHHHHHHHHHHHHHHHHHHHh---CCccchhcccceEEEeCCCCEEEcccccccccccccc
Confidence            9999999999765432 68999999999999999999998   9999999999999999999999999999986633222


Q ss_pred             ceeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhh-CCCCCCCCCccHHHHHHHHHHhCchhHHHHHhhhcCCC
Q 005257          524 ASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLS-GRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRAKGG  602 (705)
Q Consensus       524 ~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~Ellt-G~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~l~~~~~  602 (705)
                          ...++..|+|||.+..+.++.++||||||+++|||++ |+.||......   .+......+         ..  ..
T Consensus       158 ----~~~~~~~~~ape~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~---~~~~~~~~~---------~~--~~  219 (256)
T cd05039         158 ----SGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLK---DVVPHVEKG---------YR--ME  219 (256)
T ss_pred             ----cCCCcccccCchhhcCCcCCcHHHHHHHHHHHHHHHhcCCCCCCCCCHH---HHHHHHhcC---------CC--CC
Confidence                2234668999999988889999999999999999997 99998754321   111111111         11  11


Q ss_pred             CCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHh
Q 005257          603 FDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLEG  638 (705)
Q Consensus       603 ~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  638 (705)
                      .+...+..+.+++.+||..+|++||++.++++.|+.
T Consensus       220 ~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~  255 (256)
T cd05039         220 APEGCPPEVYKVMKDCWELDPAKRPTFKQLREQLAL  255 (256)
T ss_pred             CccCCCHHHHHHHHHHhccChhhCcCHHHHHHHHhc
Confidence            122345678899999999999999999999999874

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk

>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

Probab=100.00  E-value=5.4e-36  Score=315.78  Aligned_cols=253  Identities=23%  Similarity=0.335  Sum_probs=204.3

Q ss_pred             CCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCCchhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEEEEee
Q 005257          364 KGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDY  443 (705)
Q Consensus       364 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~lV~E~  443 (705)
                      +.|+..+.||+|+||.||+|.+..++..+++|.+........+.+.+|+.+++.++|||++++++.+.. ++..++||||
T Consensus        12 ~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~lv~e~   90 (292)
T cd06644          12 EVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYMVEIEILATCNHPYIVKLLGAFYW-DGKLWIMIEF   90 (292)
T ss_pred             hhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccCCHHHHHHHHHHHHHHHhCCCCcEeeeEEEEEe-CCeEEEEEec
Confidence            467888999999999999999998899999999987766677889999999999999999999998876 6689999999


Q ss_pred             CCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecCCCCc
Q 005257          444 MENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQV  523 (705)
Q Consensus       444 ~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~~~~~  523 (705)
                      +++++|..++.+...  .+++..+..++.|++.||.|||+   .+++||||||+||+++.++.+||+|||++........
T Consensus        91 ~~~~~l~~~~~~~~~--~l~~~~~~~~~~ql~~~l~~lH~---~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~  165 (292)
T cd06644          91 CPGGAVDAIMLELDR--GLTEPQIQVICRQMLEALQYLHS---MKIIHRDLKAGNVLLTLDGDIKLADFGVSAKNVKTLQ  165 (292)
T ss_pred             CCCCcHHHHHHhhcC--CCCHHHHHHHHHHHHHHHHHHhc---CCeeecCCCcceEEEcCCCCEEEccCccceecccccc
Confidence            999999988765432  58999999999999999999998   9999999999999999999999999999875433221


Q ss_pred             ceeeeeeccccCCCccccc-----cCCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhHHHHHhhh
Q 005257          524 ASTTRVVGTVGYLAPEVFS-----SGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDARLR  598 (705)
Q Consensus       524 ~~~~~~~gt~~y~APE~~~-----~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~l~  598 (705)
                       ......+++.|+|||++.     ...++.++|||||||++|||++|+.||......  ... .........     .  
T Consensus       166 -~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~--~~~-~~~~~~~~~-----~--  234 (292)
T cd06644         166 -RRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPM--RVL-LKIAKSEPP-----T--  234 (292)
T ss_pred             -ccceecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCccccHH--HHH-HHHhcCCCc-----c--
Confidence             223356889999999985     345688999999999999999999998754321  111 111111100     0  


Q ss_pred             cCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 005257          599 AKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKV  635 (705)
Q Consensus       599 ~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  635 (705)
                        ...+......+.+++..||+.+|++||++.++++.
T Consensus       235 --~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~  269 (292)
T cd06644         235 --LSQPSKWSMEFRDFLKTALDKHPETRPSAAQLLEH  269 (292)
T ss_pred             --CCCCcccCHHHHHHHHHHhcCCcccCcCHHHHhcC
Confidence              01122234567889999999999999999999763

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.

>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

Probab=100.00  E-value=2.5e-36  Score=317.57  Aligned_cols=257  Identities=26%  Similarity=0.467  Sum_probs=204.6

Q ss_pred             hCCCCcceEEeecCceEEEEEEEcC-----CCeEEEEEEeccCCc-hhHHHHHHHHHHhccCCCCCcceeeeeeeeccCc
Q 005257          363 TKGFSEENVIGVGGNGKVYKGVLEG-----GGAEIAVKRISHEND-GGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGS  436 (705)
Q Consensus       363 t~~f~~~~~LG~G~fg~Vy~~~~~~-----~~~~vavK~i~~~~~-~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~  436 (705)
                      .++|+..+.||+|+||.||++....     ++..||+|++..... ...+++.+|+.++++++||||++++++|.. +..
T Consensus         4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~~-~~~   82 (288)
T cd05050           4 RNNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDHPNIVKLLGVCAV-GKP   82 (288)
T ss_pred             hHhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCcCHHHHHHHHHHHHHHHhcCCCchheEEEEEcC-CCc
Confidence            4578889999999999999998753     567899999875533 345679999999999999999999998876 567


Q ss_pred             eEEEEeeCCCCChhHHHHhcCC-------------------CCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCC
Q 005257          437 LMLVYDYMENGSLDKWIFQCDG-------------------SMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSS  497 (705)
Q Consensus       437 ~~lV~E~~~~gsL~~~L~~~~~-------------------~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~  497 (705)
                      .++||||+++|+|.+++.....                   ...+++.+++.++.|++.||.|||+   .+++||||||+
T Consensus        83 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~---~~i~H~dl~p~  159 (288)
T cd05050          83 MCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSE---RKFVHRDLATR  159 (288)
T ss_pred             cEEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHh---CCeecccccHh
Confidence            8999999999999999974321                   1247889999999999999999998   99999999999


Q ss_pred             CeEEccCCCeeeeeeccceecCCCCcc-eeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhh-CCCCCCCCCcc
Q 005257          498 NVLLDKEMNGRLGDFGLARMHGHGQVA-STTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLS-GRRPIEEGKPN  575 (705)
Q Consensus       498 NILld~~~~~kL~DFGla~~~~~~~~~-~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~Ellt-G~~Pf~~~~~~  575 (705)
                      ||++++++.+||+|||+++........ .......+..|+|||.+.+..++.++|||||||++|||++ |..||......
T Consensus       160 nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~~~~p~~~~~~~  239 (288)
T cd05050         160 NCLVGENMVVKIADFGLSRNIYSADYYKASENDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGMQPYYGMAHE  239 (288)
T ss_pred             heEecCCCceEECccccceecccCccccccCCCccChhhcCHHHHhcCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCHH
Confidence            999999999999999998765432211 1112234677999999988889999999999999999997 88888654321


Q ss_pred             HHHHHHHHHHhCchhHHHHHhhhcCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHH
Q 005257          576 LVEMVWELMVQGKLLDALDARLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLE  637 (705)
Q Consensus       576 ~~~~v~~~~~~~~~~~~id~~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  637 (705)
                        + .......+...           ..+......+.+++.+||+.+|++||++.|+++.|+
T Consensus       240 --~-~~~~~~~~~~~-----------~~~~~~~~~l~~li~~~l~~~p~~Rpt~~el~~~l~  287 (288)
T cd05050         240 --E-VIYYVRDGNVL-----------SCPDNCPLELYNLMRLCWSKLPSDRPSFASINRILQ  287 (288)
T ss_pred             --H-HHHHHhcCCCC-----------CCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHhh
Confidence              1 11222222211           112234467889999999999999999999999986

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M

>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2

Probab=100.00  E-value=4.2e-36  Score=317.39  Aligned_cols=263  Identities=24%  Similarity=0.398  Sum_probs=201.9

Q ss_pred             hCCCCcceEEeecCceEEEEEEEcC----------------CCeEEEEEEeccCC-chhHHHHHHHHHHhccCCCCCcce
Q 005257          363 TKGFSEENVIGVGGNGKVYKGVLEG----------------GGAEIAVKRISHEN-DGGTRAFLAEISSLGRLKHKSLVG  425 (705)
Q Consensus       363 t~~f~~~~~LG~G~fg~Vy~~~~~~----------------~~~~vavK~i~~~~-~~~~~~~~~Ei~~l~~l~Hpniv~  425 (705)
                      .++|+..+.||+|+||.||++....                ++..+|+|++.... ....+++.+|++++++++|+||++
T Consensus         4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~   83 (296)
T cd05095           4 RKRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNARNDFLKEIKIMSRLKDPNIIR   83 (296)
T ss_pred             hhhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcce
Confidence            3568889999999999999986432                34579999987543 334578999999999999999999


Q ss_pred             eeeeeeeccCceEEEEeeCCCCChhHHHHhcCC--------CCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCC
Q 005257          426 LRGWCKREKGSLMLVYDYMENGSLDKWIFQCDG--------SMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSS  497 (705)
Q Consensus       426 l~g~~~~~~~~~~lV~E~~~~gsL~~~L~~~~~--------~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~  497 (705)
                      +++++.. .+..++||||+++|+|.+++.....        ...+++.++..++.|++.||+|||+   .+++||||||+
T Consensus        84 ~~~~~~~-~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~---~~i~H~dlkp~  159 (296)
T cd05095          84 LLAVCIT-SDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSS---LNFVHRDLATR  159 (296)
T ss_pred             EEEEEec-CCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHH---CCeecccCChh
Confidence            9998876 5678999999999999999976321        1247888999999999999999998   99999999999


Q ss_pred             CeEEccCCCeeeeeeccceecCCCCcce-eeeeeccccCCCccccccCCCCccccEEEEehhHHHHhh--CCCCCCCCCc
Q 005257          498 NVLLDKEMNGRLGDFGLARMHGHGQVAS-TTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLS--GRRPIEEGKP  574 (705)
Q Consensus       498 NILld~~~~~kL~DFGla~~~~~~~~~~-~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~Ellt--G~~Pf~~~~~  574 (705)
                      |||++.++.++|+|||+++......... .....++..|+|||....+.++.++|||||||++|||++  |..||.....
T Consensus       160 Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~DiwSlG~~l~el~~~~~~~p~~~~~~  239 (296)
T cd05095         160 NCLVGKNYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWESILLGKFTTASDVWAFGVTLWEILTLCKEQPYSQLSD  239 (296)
T ss_pred             eEEEcCCCCEEeccCcccccccCCcceeccCcCcCccccCCHHHHhcCCccchhhhhHHHHHHHHHHHhCCCCCccccCh
Confidence            9999999999999999998654332211 122334678999999888889999999999999999998  6778865332


Q ss_pred             c-HHHHHHHHHHhCchhHHHHHhhhcCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHH
Q 005257          575 N-LVEMVWELMVQGKLLDALDARLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLE  637 (705)
Q Consensus       575 ~-~~~~v~~~~~~~~~~~~id~~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  637 (705)
                      . ............      .....  ...+..+...+.+++.+||+.||++||++.++++.|+
T Consensus       240 ~~~~~~~~~~~~~~------~~~~~--~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~  295 (296)
T cd05095         240 EQVIENTGEFFRDQ------GRQVY--LPKPALCPDSLYKLMLSCWRRNAKERPSFQEIHATLL  295 (296)
T ss_pred             HHHHHHHHHHHhhc------ccccc--CCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHHh
Confidence            1 111000000000      00000  1112234467889999999999999999999999886

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit

>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

Probab=100.00  E-value=2.6e-36  Score=321.05  Aligned_cols=264  Identities=23%  Similarity=0.381  Sum_probs=204.7

Q ss_pred             CCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCCc-hhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEEEEe
Q 005257          364 KGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHEND-GGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYD  442 (705)
Q Consensus       364 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~-~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~lV~E  442 (705)
                      ++|+..+.||+|+||.||++.+..++..+|+|.+..... ....++.+|++++.+++||||+++++.|.. ++.+++|||
T Consensus         1 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-~~~~~lv~e   79 (308)
T cd06615           1 DDFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEIKPAIRNQIIRELKVLHECNSPYIVGFYGAFYS-DGEISICME   79 (308)
T ss_pred             CCceEEeeccCCCCeEEEEEEEcCCCeEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEee-CCEEEEEee
Confidence            368889999999999999999998999999999875533 344568899999999999999999998876 678999999


Q ss_pred             eCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecCCCC
Q 005257          443 YMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQ  522 (705)
Q Consensus       443 ~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~~~~  522 (705)
                      |+++++|.+++.+..   .+++..+..++.|++.||.|||+  ..+++||||||+|||++.++.+||+|||++.......
T Consensus        80 y~~~~~L~~~l~~~~---~~~~~~~~~~~~~i~~~l~~lH~--~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~  154 (308)
T cd06615          80 HMDGGSLDQVLKKAG---RIPENILGKISIAVLRGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM  154 (308)
T ss_pred             ccCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHh--hCCEEECCCChHHEEEecCCcEEEccCCCcccccccc
Confidence            999999999997642   68999999999999999999997  3589999999999999999999999999987653322


Q ss_pred             cceeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHH-hC--------------
Q 005257          523 VASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMV-QG--------------  587 (705)
Q Consensus       523 ~~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~-~~--------------  587 (705)
                         .....|+..|+|||++.+..++.++|||||||++|||++|+.||................ ..              
T Consensus       155 ---~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (308)
T cd06615         155 ---ANSFVGTRSYMSPERLQGTHYTVQSDIWSLGLSLVEMAIGRYPIPPPDAKELEAMFGRPVSEGEAKESHRPVSGHPP  231 (308)
T ss_pred             ---cccCCCCcCccChhHhcCCCCCccchHHHHHHHHHHHHhCCCCCCCcchhhHHHhhcCccccccccCCcccccCCCC
Confidence               123468899999999988889999999999999999999999986543211111110000 00              


Q ss_pred             ------chhHHHHHhhhcC-CCC-CHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Q 005257          588 ------KLLDALDARLRAK-GGF-DEDEVERVLHLGLLCAYPDPRARPTMRQVVKVL  636 (705)
Q Consensus       588 ------~~~~~id~~l~~~-~~~-~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L  636 (705)
                            ...+..+...... ... .......+.+++.+||+.+|++||++.++++..
T Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~  288 (308)
T cd06615         232 DSPRPMAIFELLDYIVNEPPPKLPSGAFSDEFQDFVDKCLKKNPKERADLKELTKHP  288 (308)
T ss_pred             CccchhhHHHHHHHHhcCCCccCcCcccCHHHHHHHHHHccCChhhCcCHHHHhcCh
Confidence                  0000111100000 000 011334688999999999999999999998864

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down

>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2

Probab=100.00  E-value=3.8e-36  Score=318.94  Aligned_cols=261  Identities=24%  Similarity=0.399  Sum_probs=207.2

Q ss_pred             hCCCCcceEEeecCceEEEEEEEc-------CCCeEEEEEEeccCC-chhHHHHHHHHHHhccC-CCCCcceeeeeeeec
Q 005257          363 TKGFSEENVIGVGGNGKVYKGVLE-------GGGAEIAVKRISHEN-DGGTRAFLAEISSLGRL-KHKSLVGLRGWCKRE  433 (705)
Q Consensus       363 t~~f~~~~~LG~G~fg~Vy~~~~~-------~~~~~vavK~i~~~~-~~~~~~~~~Ei~~l~~l-~Hpniv~l~g~~~~~  433 (705)
                      .++|...+.||+|+||.||+|...       ..+..||+|.+.... ....+++.+|+.++..+ +||||+++++++.. 
T Consensus        14 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~-   92 (304)
T cd05101          14 RDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ-   92 (304)
T ss_pred             HHHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccchHHHHHHHHHHHHHHhhccCCCchheeEEEec-
Confidence            456788899999999999999752       234579999886542 34457899999999999 89999999998876 


Q ss_pred             cCceEEEEeeCCCCChhHHHHhcCC-------------CCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeE
Q 005257          434 KGSLMLVYDYMENGSLDKWIFQCDG-------------SMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVL  500 (705)
Q Consensus       434 ~~~~~lV~E~~~~gsL~~~L~~~~~-------------~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NIL  500 (705)
                      ....++||||+++|+|.+++.+...             ...+++.++..++.|++.||.|||+   .+++||||||+||+
T Consensus        93 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~---~givH~dlkp~Nil  169 (304)
T cd05101          93 DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLAS---QKCIHRDLAARNVL  169 (304)
T ss_pred             CCceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHH---CCeeecccccceEE
Confidence            6688999999999999999976421             1357889999999999999999998   99999999999999


Q ss_pred             EccCCCeeeeeeccceecCCCCcce-eeeeeccccCCCccccccCCCCccccEEEEehhHHHHhh-CCCCCCCCCccHHH
Q 005257          501 LDKEMNGRLGDFGLARMHGHGQVAS-TTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLS-GRRPIEEGKPNLVE  578 (705)
Q Consensus       501 ld~~~~~kL~DFGla~~~~~~~~~~-~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~Ellt-G~~Pf~~~~~~~~~  578 (705)
                      +++++.+||+|||+++......... .....+++.|+|||++.+..++.++||||||+++|||++ |..||.....   .
T Consensus       170 i~~~~~~kl~D~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~---~  246 (304)
T cd05101         170 VTENNVMKIADFGLARDVNNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPV---E  246 (304)
T ss_pred             EcCCCcEEECCCccceecccccccccccCCCCCceeeCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCH---H
Confidence            9999999999999998765432221 222345678999999988889999999999999999998 7888865321   2


Q ss_pred             HHHHHHHhCchhHHHHHhhhcCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHhccc
Q 005257          579 MVWELMVQGKLLDALDARLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLEGKIE  641 (705)
Q Consensus       579 ~v~~~~~~~~~~~~id~~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~  641 (705)
                      ........+..           ...+......+.+++..||+++|++||++.++++.|+....
T Consensus       247 ~~~~~~~~~~~-----------~~~~~~~~~~~~~li~~cl~~~p~~Rps~~e~l~~l~~~~~  298 (304)
T cd05101         247 ELFKLLKEGHR-----------MDKPANCTNELYMMMRDCWHAIPSHRPTFKQLVEDLDRILT  298 (304)
T ss_pred             HHHHHHHcCCc-----------CCCCCCCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHHHH
Confidence            22222222211           11122345678889999999999999999999999987655

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3

Probab=100.00  E-value=3.2e-36  Score=326.93  Aligned_cols=261  Identities=22%  Similarity=0.291  Sum_probs=200.5

Q ss_pred             HhCCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCC--chhHHHHHHHHHHhccCCCCCcceeeeeeeecc-----
Q 005257          362 ATKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHEN--DGGTRAFLAEISSLGRLKHKSLVGLRGWCKREK-----  434 (705)
Q Consensus       362 at~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~--~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~-----  434 (705)
                      ..++|...+.||+|+||.||++.+..+++.||||++....  ....+.+.+|+.+++.++||||+++++++....     
T Consensus        15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~   94 (355)
T cd07874          15 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSLEEF   94 (355)
T ss_pred             hhhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCcccChHHHHHHHHHHHHHHHhCCCchhceeeeeecccccccc
Confidence            4578999999999999999999998889999999987542  334567889999999999999999999875322     


Q ss_pred             CceEEEEeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeecc
Q 005257          435 GSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGL  514 (705)
Q Consensus       435 ~~~~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGl  514 (705)
                      ...++||||+++ +|...+..     .+++..+..++.|++.||.|||+   .+|+||||||+|||++.++.+||+|||+
T Consensus        95 ~~~~lv~e~~~~-~l~~~~~~-----~l~~~~~~~~~~qi~~aL~~LH~---~givHrDikp~Nill~~~~~~kl~Dfg~  165 (355)
T cd07874          95 QDVYLVMELMDA-NLCQVIQM-----ELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGL  165 (355)
T ss_pred             ceeEEEhhhhcc-cHHHHHhh-----cCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCChHHEEECCCCCEEEeeCcc
Confidence            357999999975 67666632     47889999999999999999998   9999999999999999999999999999


Q ss_pred             ceecCCCCcceeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHh-Cc-----
Q 005257          515 ARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQ-GK-----  588 (705)
Q Consensus       515 a~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~-~~-----  588 (705)
                      ++......  ......||+.|+|||++.+..++.++|||||||++|||++|+.||.....  .+.....+.. +.     
T Consensus       166 ~~~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~--~~~~~~~~~~~~~~~~~~  241 (355)
T cd07874         166 ARTAGTSF--MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDY--IDQWNKVIEQLGTPCPEF  241 (355)
T ss_pred             cccCCCcc--ccCCccccCCccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH--HHHHHHHHHHhCCCCHHH
Confidence            98654322  22335789999999999988899999999999999999999999976432  1111111000 00     


Q ss_pred             -------hhHHHHHhhh----------------cCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 005257          589 -------LLDALDARLR----------------AKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKV  635 (705)
Q Consensus       589 -------~~~~id~~l~----------------~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  635 (705)
                             ....++....                ............+.+++.+|++.||++|||+.|++++
T Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rps~~ell~h  311 (355)
T cd07874         242 MKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDEALQH  311 (355)
T ss_pred             HHhhcHHHHHHHhcCCccccccchhhccccccccccccccccchHHHHHHHHHhcCCchhcCCHHHHhcC
Confidence                   0000000000                0000111123567899999999999999999999985

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok

>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

Probab=100.00  E-value=5.5e-36  Score=310.91  Aligned_cols=249  Identities=22%  Similarity=0.411  Sum_probs=201.4

Q ss_pred             CCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCCch---------hHHHHHHHHHHhccCCCCCcceeeeeeeeccC
Q 005257          365 GFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDG---------GTRAFLAEISSLGRLKHKSLVGLRGWCKREKG  435 (705)
Q Consensus       365 ~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~~---------~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~  435 (705)
                      +|.....||+|++|.||+|....+++.+|+|.+......         ..+.+.+|+.++++++||||+++++++.. ..
T Consensus         1 ~~~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~   79 (267)
T cd06628           1 KWIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSLD-AD   79 (267)
T ss_pred             CccccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEe-CC
Confidence            366778999999999999999888899999988654221         23568899999999999999999998876 67


Q ss_pred             ceEEEEeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccc
Q 005257          436 SLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLA  515 (705)
Q Consensus       436 ~~~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla  515 (705)
                      ..++|+||+++++|.+++....   .+++..+..++.|++.||+|||+   .+++||||+|+||++++++.+||+|||++
T Consensus        80 ~~~lv~e~~~~~~L~~~l~~~~---~l~~~~~~~~~~~l~~~l~~lH~---~~ivH~di~p~nil~~~~~~~~l~dfg~~  153 (267)
T cd06628          80 HLNIFLEYVPGGSVAALLNNYG---AFEETLVRNFVRQILKGLNYLHN---RGIIHRDIKGANILVDNKGGIKISDFGIS  153 (267)
T ss_pred             ccEEEEEecCCCCHHHHHHhcc---CccHHHHHHHHHHHHHHHHHHHh---cCcccccCCHHHEEEcCCCCEEecccCCC
Confidence            8899999999999999996542   58899999999999999999998   99999999999999999999999999999


Q ss_pred             eecCCCCcc-----eeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchh
Q 005257          516 RMHGHGQVA-----STTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLL  590 (705)
Q Consensus       516 ~~~~~~~~~-----~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~  590 (705)
                      +........     ......|+..|+|||.+.+..++.++|||||||++|||++|+.||......  ..+... ..    
T Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~--~~~~~~-~~----  226 (267)
T cd06628         154 KKLEANSLSTKTNGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTGKHPFPDCTQL--QAIFKI-GE----  226 (267)
T ss_pred             cccccccccCCccccccccCCCcCccChhHhccCCCCchhhhHHHHHHHHHHhhCCCCCCCccHH--HHHHHH-hc----
Confidence            866532111     112245788999999998888999999999999999999999999764321  111100 00    


Q ss_pred             HHHHHhhhcCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHH
Q 005257          591 DALDARLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVK  634 (705)
Q Consensus       591 ~~id~~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~  634 (705)
                           ..  ....+......+.+++.+||++||++||++.++++
T Consensus       227 -----~~--~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~  263 (267)
T cd06628         227 -----NA--SPEIPSNISSEAIDFLEKTFEIDHNKRPTAAELLK  263 (267)
T ss_pred             -----cC--CCcCCcccCHHHHHHHHHHccCCchhCcCHHHHhh
Confidence                 00  12223344567889999999999999999999886

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate

>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

Probab=100.00  E-value=4.1e-36  Score=312.72  Aligned_cols=256  Identities=24%  Similarity=0.364  Sum_probs=205.3

Q ss_pred             CCCCcceEEeecCceEEEEEEEcCC---CeEEEEEEeccCC-chhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEE
Q 005257          364 KGFSEENVIGVGGNGKVYKGVLEGG---GAEIAVKRISHEN-DGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLML  439 (705)
Q Consensus       364 ~~f~~~~~LG~G~fg~Vy~~~~~~~---~~~vavK~i~~~~-~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~l  439 (705)
                      ++|...+.||+|+||.||+|.+...   ...||||...... ....+.+.+|+.++++++||||++++++|..  ...++
T Consensus         6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~--~~~~l   83 (270)
T cd05056           6 EDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFDHPHIVKLIGVITE--NPVWI   83 (270)
T ss_pred             hhceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcCCHHHHHHHHHHHHHHHhCCCCchhceeEEEcC--CCcEE
Confidence            4577889999999999999987543   3569999887654 3456689999999999999999999998864  45789


Q ss_pred             EEeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecC
Q 005257          440 VYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHG  519 (705)
Q Consensus       440 V~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~  519 (705)
                      ||||+++|+|.+++.....  .+++.++..++.|++.||.|||+   .+++|+||||+||+++.++.+||+|||+++...
T Consensus        84 v~e~~~~~~L~~~l~~~~~--~~~~~~~~~~~~~l~~~l~~lH~---~~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~  158 (270)
T cd05056          84 VMELAPLGELRSYLQVNKY--SLDLASLILYSYQLSTALAYLES---KRFVHRDIAARNVLVSSPDCVKLGDFGLSRYLE  158 (270)
T ss_pred             EEEcCCCCcHHHHHHhCCC--CCCHHHHHHHHHHHHHHHHHHHh---CCeeccccChheEEEecCCCeEEccCceeeecc
Confidence            9999999999999976432  58999999999999999999998   999999999999999999999999999998765


Q ss_pred             CCCcceeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhh-CCCCCCCCCccHHHHHHHHHHhCchhHHHHHhhh
Q 005257          520 HGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLS-GRRPIEEGKPNLVEMVWELMVQGKLLDALDARLR  598 (705)
Q Consensus       520 ~~~~~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~Ellt-G~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~l~  598 (705)
                      ...........++..|+|||.+....++.++|||||||++|||++ |+.||......  +.. ..+..+..         
T Consensus       159 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~--~~~-~~~~~~~~---------  226 (270)
T cd05056         159 DESYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMLGVKPFQGVKNN--DVI-GRIENGER---------  226 (270)
T ss_pred             cccceecCCCCccccccChhhhccCCCCchhhhHHHHHHHHHHHHcCCCCCCCCCHH--HHH-HHHHcCCc---------
Confidence            443222222334568999999988889999999999999999986 99999765421  111 11111110         


Q ss_pred             cCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHhcc
Q 005257          599 AKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLEGKI  640 (705)
Q Consensus       599 ~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~  640 (705)
                        ...+......+.+++.+|+..+|++||++.++++.|+...
T Consensus       227 --~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~~~~l~~~~  266 (270)
T cd05056         227 --LPMPPNCPPTLYSLMTKCWAYDPSKRPRFTELKAQLSDIL  266 (270)
T ss_pred             --CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence              1122234467889999999999999999999999998654

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions

>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

Probab=100.00  E-value=3.4e-36  Score=315.26  Aligned_cols=252  Identities=24%  Similarity=0.353  Sum_probs=199.4

Q ss_pred             CCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccC-CchhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEEEEe
Q 005257          364 KGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHE-NDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYD  442 (705)
Q Consensus       364 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~-~~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~lV~E  442 (705)
                      ++|+..++||+|+||.||+|.+..+++.||+|.+... .....+++.+|++++.+++||||+++++.+.. .+..++|||
T Consensus         1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-~~~~~lv~e   79 (279)
T cd06619           1 QDIQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDITVELQKQIMSELEILYKCDSPYIIGFYGAFFV-ENRISICTE   79 (279)
T ss_pred             CcchheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCCChHHHHHHHHHHHHHHhCCCCCeeeEEEEEEE-CCEEEEEEe
Confidence            3577789999999999999999888999999998655 23345678999999999999999999998876 678899999


Q ss_pred             eCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecCCCC
Q 005257          443 YMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQ  522 (705)
Q Consensus       443 ~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~~~~  522 (705)
                      |+++++|..+.       .+++..+..++.|++.||.|||+   .+|+|+||||+|||++.++.+||+|||++.......
T Consensus        80 ~~~~~~l~~~~-------~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nill~~~~~~~l~dfg~~~~~~~~~  149 (279)
T cd06619          80 FMDGGSLDVYR-------KIPEHVLGRIAVAVVKGLTYLWS---LKILHRDVKPSNMLVNTRGQVKLCDFGVSTQLVNSI  149 (279)
T ss_pred             cCCCCChHHhh-------cCCHHHHHHHHHHHHHHHHHHHH---CCEeeCCCCHHHEEECCCCCEEEeeCCcceeccccc
Confidence            99999997653       47888999999999999999998   999999999999999999999999999998654322


Q ss_pred             cceeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhHHHHHhhhcCCC
Q 005257          523 VASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRAKGG  602 (705)
Q Consensus       523 ~~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~l~~~~~  602 (705)
                         .....|+..|+|||++.+..++.++|||||||++|||++|+.||...............     ...+...... ..
T Consensus       150 ---~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~-----~~~~~~~~~~-~~  220 (279)
T cd06619         150 ---AKTYVGTNAYMAPERISGEQYGIHSDVWSLGISFMELALGRFPYPQIQKNQGSLMPLQL-----LQCIVDEDPP-VL  220 (279)
T ss_pred             ---ccCCCCChhhcCceeecCCCCCCcchHHHHHHHHHHHHhCCCCchhhcccccccchHHH-----HHHHhccCCC-CC
Confidence               22357899999999999888999999999999999999999999642211000000000     0000000000 00


Q ss_pred             CCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 005257          603 FDEDEVERVLHLGLLCAYPDPRARPTMRQVVKV  635 (705)
Q Consensus       603 ~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  635 (705)
                      ........+.+++..||+.+|++||++++++++
T Consensus       221 ~~~~~~~~~~~li~~~l~~~P~~Rp~~~eil~~  253 (279)
T cd06619         221 PVGQFSEKFVHFITQCMRKQPKERPAPENLMDH  253 (279)
T ss_pred             CCCcCCHHHHHHHHHHhhCChhhCCCHHHHhcC
Confidence            111233567899999999999999999999875

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p

>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=100.00  E-value=2.3e-36  Score=315.94  Aligned_cols=240  Identities=24%  Similarity=0.407  Sum_probs=189.1

Q ss_pred             EEeecCceEEEEEEEcCC------------------------CeEEEEEEeccCCchhHHHHHHHHHHhccCCCCCccee
Q 005257          371 VIGVGGNGKVYKGVLEGG------------------------GAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGL  426 (705)
Q Consensus       371 ~LG~G~fg~Vy~~~~~~~------------------------~~~vavK~i~~~~~~~~~~~~~Ei~~l~~l~Hpniv~l  426 (705)
                      .||+|+||.||+|.+..+                        ...|++|.+.........+|.+|+.+++.++||||+++
T Consensus         2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~   81 (274)
T cd05076           2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSHRDIALAFFETASLMSQVSHIHLAFV   81 (274)
T ss_pred             CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHHHHHHHHHHHHHHHHhcCCCCCeeeE
Confidence            599999999999986321                        24589998866555556778999999999999999999


Q ss_pred             eeeeeeccCceEEEEeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCC-
Q 005257          427 RGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEM-  505 (705)
Q Consensus       427 ~g~~~~~~~~~~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~-  505 (705)
                      +++|.. ....++||||+++|+|..++.....  .+++..+..++.|++.||+|||+   ++|+||||||+|||++..+ 
T Consensus        82 ~~~~~~-~~~~~lv~ey~~~g~L~~~l~~~~~--~~~~~~~~~i~~qi~~~l~~lH~---~~iiH~dlkp~Nill~~~~~  155 (274)
T cd05076          82 HGVCVR-GSENIMVEEFVEHGPLDVCLRKEKG--RVPVAWKITVAQQLASALSYLED---KNLVHGNVCAKNILLARLGL  155 (274)
T ss_pred             EEEEEe-CCceEEEEecCCCCcHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHc---CCccCCCCCcccEEEeccCc
Confidence            999986 6688999999999999999865432  68999999999999999999998   9999999999999997644 


Q ss_pred             ------CeeeeeeccceecCCCCcceeeeeeccccCCCcccccc-CCCCccccEEEEehhHHHHh-hCCCCCCCCCccHH
Q 005257          506 ------NGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSS-GRASTQTDVFGFGILILEVL-SGRRPIEEGKPNLV  577 (705)
Q Consensus       506 ------~~kL~DFGla~~~~~~~~~~~~~~~gt~~y~APE~~~~-~~~s~ksDVwS~Gvvl~Ell-tG~~Pf~~~~~~~~  577 (705)
                            .+|++|||++......     ....++..|+|||.+.+ ..++.++|||||||++|||+ +|+.||........
T Consensus       156 ~~~~~~~~kl~d~g~~~~~~~~-----~~~~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~  230 (274)
T cd05076         156 AEGTSPFIKLSDPGVSFTALSR-----EERVERIPWIAPECVPGGNSLSTAADKWSFGTTLLEICFDGEVPLKERTPSEK  230 (274)
T ss_pred             ccCccceeeecCCccccccccc-----cccccCCcccCchhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCccccChHHH
Confidence                  3799999998644222     12356788999998865 56899999999999999995 69999876433211


Q ss_pred             HHHHHHHHhCchhHHHHHhhhcCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHH
Q 005257          578 EMVWELMVQGKLLDALDARLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLE  637 (705)
Q Consensus       578 ~~v~~~~~~~~~~~~id~~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  637 (705)
                      ...            .....    ..+......+.+++..||+.+|++||++.++++.|.
T Consensus       231 ~~~------------~~~~~----~~~~~~~~~~~~li~~cl~~~p~~Rps~~~il~~L~  274 (274)
T cd05076         231 ERF------------YEKKH----RLPEPSCKELATLISQCLTYEPTQRPSFRTILRDLT  274 (274)
T ss_pred             HHH------------HHhcc----CCCCCCChHHHHHHHHHcccChhhCcCHHHHHHhhC
Confidence            110            11111    111112246788999999999999999999998773

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt

>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2

Probab=100.00  E-value=6.5e-36  Score=325.03  Aligned_cols=294  Identities=21%  Similarity=0.239  Sum_probs=211.4

Q ss_pred             HhCCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccC--CchhHHHHHHHHHHhccCCCCCcceeeeeeeecc-----
Q 005257          362 ATKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHE--NDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREK-----  434 (705)
Q Consensus       362 at~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~--~~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~-----  434 (705)
                      ..++|+..+.||+|+||.||++.+..+++.||||++...  .......+.+|+.+++.++||||+++++++....     
T Consensus        19 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~   98 (359)
T cd07876          19 VLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLEEF   98 (359)
T ss_pred             hhhceEEEEEeecCCCEEEEEEEEcCCCceeEEEEecccccchhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCcccc
Confidence            457899999999999999999999988999999998654  2334567889999999999999999999876422     


Q ss_pred             CceEEEEeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeecc
Q 005257          435 GSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGL  514 (705)
Q Consensus       435 ~~~~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGl  514 (705)
                      ..+++||||+++ +|...+..     .+++..+..++.|++.||.|||+   .+|+||||||+|||++.++.+||+|||+
T Consensus        99 ~~~~lv~e~~~~-~l~~~~~~-----~~~~~~~~~~~~qi~~~L~~LH~---~~ivHrDlkp~NIl~~~~~~~kl~Dfg~  169 (359)
T cd07876          99 QDVYLVMELMDA-NLCQVIHM-----ELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGL  169 (359)
T ss_pred             ceeEEEEeCCCc-CHHHHHhc-----cCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCHHHEEECCCCCEEEecCCC
Confidence            357999999975 66666532     47889999999999999999998   9999999999999999999999999999


Q ss_pred             ceecCCCCcceeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhHHHH
Q 005257          515 ARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALD  594 (705)
Q Consensus       515 a~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~~id  594 (705)
                      ++......  ......||+.|+|||++.+..++.++|||||||++|||++|+.||...+..  +. +..+         .
T Consensus       170 a~~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~el~tg~~pf~~~~~~--~~-~~~~---------~  235 (359)
T cd07876         170 ARTACTNF--MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDHI--DQ-WNKV---------I  235 (359)
T ss_pred             ccccccCc--cCCCCcccCCCCCchhccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHH--HH-HHHH---------H
Confidence            97643322  123357899999999999989999999999999999999999999865321  11 1110         0


Q ss_pred             HhhhcCCCCCHHHHHHHHHHHHHcCCCCCCCC-CCHHHHHHHHHhccccCCCCCcchhhHHHHHHhhccccccccccccc
Q 005257          595 ARLRAKGGFDEDEVERVLHLGLLCAYPDPRAR-PTMRQVVKVLEGKIEAGIENETEDMDAYLLQQVKSKDMWANYSRSFG  673 (705)
Q Consensus       595 ~~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~R-Ps~~evl~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~  673 (705)
                      ..+   +....+....+...........|..+ .+..++.....  .+ ............+.+++.++..++|..|.++
T Consensus       236 ~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~-~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~  309 (359)
T cd07876         236 EQL---GTPSAEFMNRLQPTVRNYVENRPQYPGISFEELFPDWI--FP-SESERDKLKTSQARDLLSKMLVIDPDKRISV  309 (359)
T ss_pred             Hhc---CCCcHHHHHHHHHHHHHHHhhCCCCCCcchhhhccccc--cc-cccccccccchhHHHHHHHHhccCcccCCCH
Confidence            011   12222222223222222222233222 12222111100  00 0000011123445677788888999999999


Q ss_pred             cCCCCCCCccc
Q 005257          674 YGYATHPTFHD  684 (705)
Q Consensus       674 ~~~~~hp~f~~  684 (705)
                      .+++.||||..
T Consensus       310 ~e~l~hp~~~~  320 (359)
T cd07876         310 DEALRHPYITV  320 (359)
T ss_pred             HHHhcCchhhh
Confidence            99999999964

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=6.9e-36  Score=308.85  Aligned_cols=254  Identities=26%  Similarity=0.355  Sum_probs=206.9

Q ss_pred             CCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCCchhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEEEEee
Q 005257          364 KGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDY  443 (705)
Q Consensus       364 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~lV~E~  443 (705)
                      ++|...+.||+|+||.||+|....+++.+++|.+........+.+.+|+.++++++||||+++++.+.. +..++++|||
T Consensus         3 ~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-~~~~~l~~e~   81 (262)
T cd06613           3 EDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPGDDFEIIQQEISMLKECRHPNIVAYFGSYLR-RDKLWIVMEY   81 (262)
T ss_pred             cceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCchhhHHHHHHHHHHHHhCCCCChhceEEEEEe-CCEEEEEEeC
Confidence            578889999999999999999988889999999987666667889999999999999999999998776 6789999999


Q ss_pred             CCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecCCCCc
Q 005257          444 MENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQV  523 (705)
Q Consensus       444 ~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~~~~~  523 (705)
                      +++++|.+++....  ..+++.++..++.|++.||.|||+   .+++|+||||+||++++++.+||+|||++........
T Consensus        82 ~~~~~l~~~~~~~~--~~l~~~~~~~~~~ql~~~l~~lh~---~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~  156 (262)
T cd06613          82 CGGGSLQDIYQVTR--GPLSELQIAYVCRETLKGLAYLHE---TGKIHRDIKGANILLTEDGDVKLADFGVSAQLTATIA  156 (262)
T ss_pred             CCCCcHHHHHHhhc--cCCCHHHHHHHHHHHHHHHHHHHh---CCceecCCChhhEEECCCCCEEECccccchhhhhhhh
Confidence            99999999987642  268999999999999999999998   9999999999999999999999999999876543221


Q ss_pred             ceeeeeeccccCCCccccccC---CCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhHHHHHhhhcC
Q 005257          524 ASTTRVVGTVGYLAPEVFSSG---RASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRAK  600 (705)
Q Consensus       524 ~~~~~~~gt~~y~APE~~~~~---~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~l~~~  600 (705)
                       ......++..|+|||.+.+.   .++.++|||||||++|||++|+.||....+..  .... ........   ..    
T Consensus       157 -~~~~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~~~--~~~~-~~~~~~~~---~~----  225 (262)
T cd06613         157 -KRKSFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLHPMR--ALFL-ISKSNFPP---PK----  225 (262)
T ss_pred             -ccccccCCccccCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCCHHH--HHHH-HHhccCCC---cc----
Confidence             12235688899999999776   78999999999999999999999997644211  1100 11110000   00    


Q ss_pred             CCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHH
Q 005257          601 GGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVK  634 (705)
Q Consensus       601 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~  634 (705)
                      ..........+.+++.+||+.+|.+||++.+++.
T Consensus       226 ~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~  259 (262)
T cd06613         226 LKDKEKWSPVFHDFIKKCLTKDPKKRPTATKLLQ  259 (262)
T ss_pred             ccchhhhhHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence            1112234567899999999999999999999875

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ

>PRK13184 pknD serine/threonine-protein kinase; Reviewed

Probab=100.00  E-value=2.9e-36  Score=350.36  Aligned_cols=262  Identities=22%  Similarity=0.328  Sum_probs=205.5

Q ss_pred             CCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCC---chhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEEE
Q 005257          364 KGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHEN---DGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLV  440 (705)
Q Consensus       364 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~---~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~lV  440 (705)
                      ++|...++||+|+||.||+|++..+++.||||++....   ....+.+.+|++++++++||||+++++++.. ++..++|
T Consensus         2 grYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d-~~~lyLV   80 (932)
T PRK13184          2 QRYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSICSD-GDPVYYT   80 (932)
T ss_pred             CCeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEee-CCEEEEE
Confidence            47888999999999999999999889999999987542   2335679999999999999999999998876 6788999


Q ss_pred             EeeCCCCChhHHHHhcCC--------CCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeee
Q 005257          441 YDYMENGSLDKWIFQCDG--------SMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDF  512 (705)
Q Consensus       441 ~E~~~~gsL~~~L~~~~~--------~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DF  512 (705)
                      |||+++|+|.+++.....        ...+++..+++++.||+.||+|||+   .+|+||||||+|||++.++.+||+||
T Consensus        81 MEY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs---~GIIHRDLKPeNILLd~dg~vKLiDF  157 (932)
T PRK13184         81 MPYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHS---KGVLHRDLKPDNILLGLFGEVVILDW  157 (932)
T ss_pred             EEcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHH---CCccccCCchheEEEcCCCCEEEEec
Confidence            999999999999864211        1246678889999999999999998   99999999999999999999999999


Q ss_pred             ccceecCCCCc-----------------ceeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhhCCCCCCCCCcc
Q 005257          513 GLARMHGHGQV-----------------ASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPN  575 (705)
Q Consensus       513 Gla~~~~~~~~-----------------~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~  575 (705)
                      |+++.......                 ......+||+.|||||++.+..++.++|||||||++|||++|+.||......
T Consensus       158 GLAk~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~~~S~kSDIWSLGVILyELLTG~~PF~~~~~~  237 (932)
T PRK13184        158 GAAIFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLGVPASESTDIYALGVILYQMLTLSFPYRRKKGR  237 (932)
T ss_pred             CcceecccccccccccccccccccccccccCCCCCCCCCCCCHHHhcCCCCCcHhHHHHHHHHHHHHHHCCCCCCCcchh
Confidence            99986621110                 0111246999999999999989999999999999999999999999763321


Q ss_pred             HHHHHHHHHHhCchhHHHHHhhhcCCCCCHHHHHHHHHHHHHcCCCCCCCCC-CHHHHHHHHHhccc
Q 005257          576 LVEMVWELMVQGKLLDALDARLRAKGGFDEDEVERVLHLGLLCAYPDPRARP-TMRQVVKVLEGKIE  641 (705)
Q Consensus       576 ~~~~v~~~~~~~~~~~~id~~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP-s~~evl~~L~~~~~  641 (705)
                      .  ..    .........  ...    ...+.+..+.+++.+|++.||++|| +++++.+.|+...+
T Consensus       238 k--i~----~~~~i~~P~--~~~----p~~~iP~~L~~LI~rcL~~DP~kR~ss~eeLl~~Le~~lq  292 (932)
T PRK13184        238 K--IS----YRDVILSPI--EVA----PYREIPPFLSQIAMKALAVDPAERYSSVQELKQDLEPHLQ  292 (932)
T ss_pred             h--hh----hhhhccChh--hcc----ccccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHh
Confidence            0  00    000000000  000    0112345678899999999999995 67777777776654

>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

Probab=100.00  E-value=2.5e-36  Score=311.03  Aligned_cols=250  Identities=26%  Similarity=0.406  Sum_probs=204.9

Q ss_pred             CCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCCchhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEEEEee
Q 005257          364 KGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDY  443 (705)
Q Consensus       364 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~lV~E~  443 (705)
                      ++|+..+.||+|+||.||+|....++..+++|.++....  .+++.+|++++++++||||+++++++.. +...++++||
T Consensus         3 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~--~~~~~~e~~~~~~l~~~~i~~~~~~~~~-~~~~~l~~e~   79 (256)
T cd06612           3 EVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEED--LQEIIKEISILKQCDSPYIVKYYGSYFK-NTDLWIVMEY   79 (256)
T ss_pred             ccchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHHH--HHHHHHHHHHHHhCCCCcEeeeeeeeec-CCcEEEEEec
Confidence            578888999999999999999998889999999865432  6789999999999999999999998876 6789999999


Q ss_pred             CCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecCCCCc
Q 005257          444 MENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQV  523 (705)
Q Consensus       444 ~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~~~~~  523 (705)
                      +++++|.+++....  ..+++..+..++.|++.||.|||+   .+++|+||+|+||+++.++.+||+|||++........
T Consensus        80 ~~~~~L~~~l~~~~--~~l~~~~~~~~~~~l~~~l~~lh~---~~i~H~dl~~~ni~~~~~~~~~l~dfg~~~~~~~~~~  154 (256)
T cd06612          80 CGAGSVSDIMKITN--KTLTEEEIAAILYQTLKGLEYLHS---NKKIHRDIKAGNILLNEEGQAKLADFGVSGQLTDTMA  154 (256)
T ss_pred             CCCCcHHHHHHhCc--cCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCcceEEECCCCcEEEcccccchhcccCcc
Confidence            99999999986543  268999999999999999999998   8999999999999999999999999999986654322


Q ss_pred             ceeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhHHHHHhhhcCCCC
Q 005257          524 ASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRAKGGF  603 (705)
Q Consensus       524 ~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~l~~~~~~  603 (705)
                       ......|+..|+|||++.+..++.++|||||||++|||++|+.||....+..  .. .         .+..........
T Consensus       155 -~~~~~~~~~~y~~PE~~~~~~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~~--~~-~---------~~~~~~~~~~~~  221 (256)
T cd06612         155 -KRNTVIGTPFWMAPEVIQEIGYNNKADIWSLGITAIEMAEGKPPYSDIHPMR--AI-F---------MIPNKPPPTLSD  221 (256)
T ss_pred             -ccccccCCccccCHHHHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCcchhh--hh-h---------hhccCCCCCCCc
Confidence             2223457899999999988889999999999999999999999997643210  00 0         000000000111


Q ss_pred             CHHHHHHHHHHHHHcCCCCCCCCCCHHHHHH
Q 005257          604 DEDEVERVLHLGLLCAYPDPRARPTMRQVVK  634 (705)
Q Consensus       604 ~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~  634 (705)
                      +......+.+++..||+.+|++||++.|+++
T Consensus       222 ~~~~~~~~~~~i~~~l~~~P~~Rps~~~il~  252 (256)
T cd06612         222 PEKWSPEFNDFVKKCLVKDPEERPSAIQLLQ  252 (256)
T ss_pred             hhhcCHHHHHHHHHHHhcChhhCcCHHHHhc
Confidence            2233456889999999999999999999986

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a

>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3

Probab=100.00  E-value=2.7e-36  Score=324.69  Aligned_cols=260  Identities=25%  Similarity=0.413  Sum_probs=205.6

Q ss_pred             CCCCcceEEeecCceEEEEEEEcC-------CCeEEEEEEeccCC-chhHHHHHHHHHHhccC-CCCCcceeeeeeeecc
Q 005257          364 KGFSEENVIGVGGNGKVYKGVLEG-------GGAEIAVKRISHEN-DGGTRAFLAEISSLGRL-KHKSLVGLRGWCKREK  434 (705)
Q Consensus       364 ~~f~~~~~LG~G~fg~Vy~~~~~~-------~~~~vavK~i~~~~-~~~~~~~~~Ei~~l~~l-~Hpniv~l~g~~~~~~  434 (705)
                      .+|...+.||+|+||.||++....       ....||+|.++... ....+++.+|++++.++ +||||++++++|.. +
T Consensus        12 ~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~-~   90 (334)
T cd05100          12 TRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ-D   90 (334)
T ss_pred             hHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccccCHHHHHHHHHHHHHHHhhcCCCCeeeeeEEEcc-C
Confidence            467889999999999999998642       22469999887543 34467899999999999 89999999999876 6


Q ss_pred             CceEEEEeeCCCCChhHHHHhcC-------------CCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEE
Q 005257          435 GSLMLVYDYMENGSLDKWIFQCD-------------GSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLL  501 (705)
Q Consensus       435 ~~~~lV~E~~~~gsL~~~L~~~~-------------~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILl  501 (705)
                      +..++++||+++|+|.+++.+..             ....+++.++..++.|++.||.|||+   ++++||||||+|||+
T Consensus        91 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~---~givH~dlkp~Nill  167 (334)
T cd05100          91 GPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLAS---QKCIHRDLAARNVLV  167 (334)
T ss_pred             CceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHH---CCeeccccccceEEE
Confidence            68899999999999999997532             12358899999999999999999998   999999999999999


Q ss_pred             ccCCCeeeeeeccceecCCCCcc-eeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhh-CCCCCCCCCccHHHH
Q 005257          502 DKEMNGRLGDFGLARMHGHGQVA-STTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLS-GRRPIEEGKPNLVEM  579 (705)
Q Consensus       502 d~~~~~kL~DFGla~~~~~~~~~-~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~Ellt-G~~Pf~~~~~~~~~~  579 (705)
                      +.++.+||+|||+++........ ......++..|+|||++.+..++.++|||||||++|||++ |..||.....   +.
T Consensus       168 ~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~---~~  244 (334)
T cd05100         168 TEDNVMKIADFGLARDVHNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPV---EE  244 (334)
T ss_pred             cCCCcEEECCcccceecccccccccccCCCcCceEcCHHHhccCCcCchhhhHHHHHHHHHHHhcCCCCCCCCCH---HH
Confidence            99999999999999865432211 1122234567999999988889999999999999999998 8888865432   11


Q ss_pred             HHHHHHhCchhHHHHHhhhcCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHhccc
Q 005257          580 VWELMVQGKLLDALDARLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLEGKIE  641 (705)
Q Consensus       580 v~~~~~~~~~~~~id~~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~  641 (705)
                      ....+..+..           ...+......+.+++..||+.+|++||++.++++.|+....
T Consensus       245 ~~~~~~~~~~-----------~~~~~~~~~~l~~li~~cl~~~p~~Rps~~ell~~l~~~~~  295 (334)
T cd05100         245 LFKLLKEGHR-----------MDKPANCTHELYMIMRECWHAVPSQRPTFKQLVEDLDRVLT  295 (334)
T ss_pred             HHHHHHcCCC-----------CCCCCCCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHhh
Confidence            1222221111           11222334578899999999999999999999999987654

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1

Probab=100.00  E-value=6e-36  Score=325.89  Aligned_cols=295  Identities=19%  Similarity=0.205  Sum_probs=213.9

Q ss_pred             HhCCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccC--CchhHHHHHHHHHHhccCCCCCcceeeeeeeec-----c
Q 005257          362 ATKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHE--NDGGTRAFLAEISSLGRLKHKSLVGLRGWCKRE-----K  434 (705)
Q Consensus       362 at~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~--~~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~-----~  434 (705)
                      ..++|...+.||+|+||.||++.+...++.||||++...  .....+.+.+|+.+++.++||||+++++++...     .
T Consensus        22 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~~~~  101 (364)
T cd07875          22 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEF  101 (364)
T ss_pred             hhcceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccccCchhHHHHHHHHHHHHhcCCCCccccceeeccccccccc
Confidence            457899999999999999999999988999999998754  233456788999999999999999999977532     2


Q ss_pred             CceEEEEeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeecc
Q 005257          435 GSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGL  514 (705)
Q Consensus       435 ~~~~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGl  514 (705)
                      ...++||||+++ +|.+.+..     .+++..+..++.|++.||+|||+   ++|+||||||+|||++.++.+||+|||+
T Consensus       102 ~~~~lv~e~~~~-~l~~~~~~-----~~~~~~~~~~~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~~~~~kL~DfG~  172 (364)
T cd07875         102 QDVYIVMELMDA-NLCQVIQM-----ELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGL  172 (364)
T ss_pred             CeEEEEEeCCCC-CHHHHHHh-----cCCHHHHHHHHHHHHHHHHHHhh---CCeecCCCCHHHEEECCCCcEEEEeCCC
Confidence            357999999975 77776642     47889999999999999999998   9999999999999999999999999999


Q ss_pred             ceecCCCCcceeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhHHHH
Q 005257          515 ARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALD  594 (705)
Q Consensus       515 a~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~~id  594 (705)
                      ++......  ......||+.|+|||++.+..++.++|||||||++|||++|+.||......  +.. ..           
T Consensus       173 a~~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~--~~~-~~-----------  236 (364)
T cd07875         173 ARTAGTSF--MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHI--DQW-NK-----------  236 (364)
T ss_pred             ccccCCCC--cccCCcccCCcCCHHHHhCCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHH--HHH-HH-----------
Confidence            98654322  223357899999999999989999999999999999999999999765421  111 11           


Q ss_pred             HhhhcCCCCCHHHHHHHHHHHHHcCCCCCCCC-CCHHHHHHHHHhccccCCCCCcchhhHHHHHHhhccccccccccccc
Q 005257          595 ARLRAKGGFDEDEVERVLHLGLLCAYPDPRAR-PTMRQVVKVLEGKIEAGIENETEDMDAYLLQQVKSKDMWANYSRSFG  673 (705)
Q Consensus       595 ~~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~R-Ps~~evl~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~  673 (705)
                       .+...+...++....+...+..+....|... .++.++..   .................+.+++..+...+|..|.++
T Consensus       237 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~t~  312 (364)
T cd07875         237 -VIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFP---DVLFPADSEHNKLKASQARDLLSKMLVIDASKRISV  312 (364)
T ss_pred             -HHHhcCCCCHHHHHhhhHHHHHHHhhCCCcCCCChHhhCc---cccccccccccccccHHHHHHHHHhcCcCcccCCCH
Confidence             1111122223333333333333322222211 12221111   110000001111123456678888889999999999


Q ss_pred             cCCCCCCCcccc
Q 005257          674 YGYATHPTFHDI  685 (705)
Q Consensus       674 ~~~~~hp~f~~~  685 (705)
                      .+++.||||...
T Consensus       313 ~e~L~hp~~~~~  324 (364)
T cd07875         313 DEALQHPYINVW  324 (364)
T ss_pred             HHHhcCcccccc
Confidence            999999999753

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

Probab=100.00  E-value=9.3e-36  Score=307.18  Aligned_cols=252  Identities=25%  Similarity=0.397  Sum_probs=207.8

Q ss_pred             CCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccC--CchhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEEEEe
Q 005257          365 GFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHE--NDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYD  442 (705)
Q Consensus       365 ~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~--~~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~lV~E  442 (705)
                      +|+..+.||+|+||.||.+....+++.+++|++...  .....+++.+|+.++++++|+||+++++++.. .+.++++||
T Consensus         1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-~~~~~~~~e   79 (256)
T cd08221           1 HYIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNIIAYYNHFMD-DNTLLIEME   79 (256)
T ss_pred             CceEeeEecccCCceEEEEEEcCCCcEEEEEEEeecccchhHHHHHHHHHHHHHhCCCCCeeEEEeEEec-CCeEEEEEE
Confidence            478889999999999999999989999999998654  34456778999999999999999999998876 678999999


Q ss_pred             eCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecCCCC
Q 005257          443 YMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQ  522 (705)
Q Consensus       443 ~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~~~~  522 (705)
                      |+++++|.+++.+... ..+++.++..++.|++.||.|||+   .+++|+||+|+||++++++.+||+|||++.......
T Consensus        80 ~~~~~~L~~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~lh~---~~i~h~dl~p~ni~~~~~~~~kl~d~~~~~~~~~~~  155 (256)
T cd08221          80 YANGGTLYDKIVRQKG-QLFEEEMVLWYLFQIVSAVSYIHK---AGILHRDIKTLNIFLTKAGLIKLGDFGISKILGSEY  155 (256)
T ss_pred             ecCCCcHHHHHHhccc-cCCCHHHHHHHHHHHHHHHHHHHh---CCccccCCChHhEEEeCCCCEEECcCcceEEccccc
Confidence            9999999999976532 368999999999999999999998   899999999999999999999999999998765433


Q ss_pred             cceeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhHHHHHhhhcCCC
Q 005257          523 VASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRAKGG  602 (705)
Q Consensus       523 ~~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~l~~~~~  602 (705)
                      . ......|++.|+|||.+.+..++.++||||||+++|||++|+.||.....  .+.... +..+..           ..
T Consensus       156 ~-~~~~~~~~~~y~ape~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~--~~~~~~-~~~~~~-----------~~  220 (256)
T cd08221         156 S-MAETVVGTPYYMSPELCQGVKYNFKSDIWALGCVLYELLTLKRTFDATNP--LNLVVK-IVQGNY-----------TP  220 (256)
T ss_pred             c-cccccCCCccccCHhhcCCCCCCCcchhHHHHHHHHHHHHCCCCCCCCCH--HHHHHH-HHcCCC-----------CC
Confidence            2 22335689999999999888889999999999999999999999976432  111111 111211           11


Q ss_pred             CCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Q 005257          603 FDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVL  636 (705)
Q Consensus       603 ~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L  636 (705)
                      ........+.+++..||+.+|++||++.++++.+
T Consensus       221 ~~~~~~~~~~~~i~~~l~~~p~~R~s~~~ll~~~  254 (256)
T cd08221         221 VVSVYSSELISLVHSLLQQDPEKRPTADEVLDQP  254 (256)
T ss_pred             CccccCHHHHHHHHHHcccCcccCCCHHHHhhCc
Confidence            1223345688899999999999999999998753

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa

>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=2.8e-36  Score=323.95  Aligned_cols=241  Identities=24%  Similarity=0.325  Sum_probs=188.2

Q ss_pred             EeecCceEEEEEEEcCCCeEEEEEEeccCC---chhHHHHHHHHHHhccC---CCCCcceeeeeeeeccCceEEEEeeCC
Q 005257          372 IGVGGNGKVYKGVLEGGGAEIAVKRISHEN---DGGTRAFLAEISSLGRL---KHKSLVGLRGWCKREKGSLMLVYDYME  445 (705)
Q Consensus       372 LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~---~~~~~~~~~Ei~~l~~l---~Hpniv~l~g~~~~~~~~~~lV~E~~~  445 (705)
                      ||+|+||+||+|....+++.||||++....   ......+..|..++.++   +||||++++.++.. ....++||||++
T Consensus         1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~-~~~~~lv~e~~~   79 (330)
T cd05586           1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQT-DSDLYLVTDYMS   79 (330)
T ss_pred             CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEec-CCeEEEEEcCCC
Confidence            699999999999999999999999986432   22334455677777665   69999999998876 678999999999


Q ss_pred             CCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecCCCCcce
Q 005257          446 NGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVAS  525 (705)
Q Consensus       446 ~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~~~~~~~  525 (705)
                      +|+|..++.+..   .+++..+..++.||+.||+|||+   ++|+||||||+|||++.++.+||+|||+++....... .
T Consensus        80 ~g~L~~~l~~~~---~~~~~~~~~~~~qil~al~~LH~---~~ivHrDlkp~Nili~~~~~~kl~Dfg~a~~~~~~~~-~  152 (330)
T cd05586          80 GGELFWHLQKEG---RFSEDRAKFYIAELVLALEHLHK---YDIVYRDLKPENILLDATGHIALCDFGLSKANLTDNK-T  152 (330)
T ss_pred             CChHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHH---CCeEeccCCHHHeEECCCCCEEEecCCcCcCCCCCCC-C
Confidence            999999886533   68999999999999999999998   9999999999999999999999999999875432221 2


Q ss_pred             eeeeeccccCCCccccccC-CCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhHHHHHhhhcCCCCC
Q 005257          526 TTRVVGTVGYLAPEVFSSG-RASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRAKGGFD  604 (705)
Q Consensus       526 ~~~~~gt~~y~APE~~~~~-~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~l~~~~~~~  604 (705)
                      .....||+.|+|||++.+. .++.++|||||||++|||++|+.||.....   ......+..+..      ++.     .
T Consensus       153 ~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~~~~---~~~~~~i~~~~~------~~~-----~  218 (330)
T cd05586         153 TNTFCGTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYAEDT---QQMYRNIAFGKV------RFP-----K  218 (330)
T ss_pred             ccCccCCccccCHHHHcCCCCCCCccceeccccEEEEeccCCCCCCCCCH---HHHHHHHHcCCC------CCC-----C
Confidence            2345799999999998764 479999999999999999999999976432   112222222211      010     1


Q ss_pred             HHHHHHHHHHHHHcCCCCCCCCCC----HHHHHH
Q 005257          605 EDEVERVLHLGLLCAYPDPRARPT----MRQVVK  634 (705)
Q Consensus       605 ~~~~~~l~~l~~~Cl~~dP~~RPs----~~evl~  634 (705)
                      ......+.+++..||+.||++||+    +.++++
T Consensus       219 ~~~~~~~~~li~~~L~~~P~~R~~~~~~~~~ll~  252 (330)
T cd05586         219 NVLSDEGRQFVKGLLNRNPQHRLGAHRDAVELKE  252 (330)
T ss_pred             ccCCHHHHHHHHHHcCCCHHHCCCCCCCHHHHhc
Confidence            112356778999999999999985    555544

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of

>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]

Probab=100.00  E-value=3.2e-38  Score=303.81  Aligned_cols=253  Identities=23%  Similarity=0.329  Sum_probs=208.2

Q ss_pred             hCCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccC--CchhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEEE
Q 005257          363 TKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHE--NDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLV  440 (705)
Q Consensus       363 t~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~--~~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~lV  440 (705)
                      +++|+..+.||+|.|+.||++.+..+|+.+|+|.+...  +..+.+++.+|+.+.+.|+||||+++..-+.+ ....|||
T Consensus        10 ~d~y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~LqHP~IvrL~~ti~~-~~~~ylv   88 (355)
T KOG0033|consen   10 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQE-ESFHYLV   88 (355)
T ss_pred             chhhhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhccccHHHHHHHHHHHHhcCCCcEeehhhhhcc-cceeEEE
Confidence            45677888999999999999999999999999988644  34467889999999999999999999997765 6788999


Q ss_pred             EeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccC---CCeeeeeecccee
Q 005257          441 YDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKE---MNGRLGDFGLARM  517 (705)
Q Consensus       441 ~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~---~~~kL~DFGla~~  517 (705)
                      +|+|.|++|..-+-+.   ..+++..+-..+.||+++|.|+|.   ++|||||+||+|++|-+.   --+||+|||+|..
T Consensus        89 Fe~m~G~dl~~eIV~R---~~ySEa~aSH~~rQiLeal~yCH~---n~IvHRDvkP~nllLASK~~~A~vKL~~FGvAi~  162 (355)
T KOG0033|consen   89 FDLVTGGELFEDIVAR---EFYSEADASHCIQQILEALAYCHS---NGIVHRDLKPENLLLASKAKGAAVKLADFGLAIE  162 (355)
T ss_pred             EecccchHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHh---cCceeccCChhheeeeeccCCCceeecccceEEE
Confidence            9999999997666543   368889999999999999999998   999999999999999643   3489999999998


Q ss_pred             cCCCCcceeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhHHHHHhh
Q 005257          518 HGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDARL  597 (705)
Q Consensus       518 ~~~~~~~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~l  597 (705)
                      ...+  ......+|||+|||||++...+|+..+|||+.||+||-|+.|..||.+.+.   ..+.+.+.+|...    -. 
T Consensus       163 l~~g--~~~~G~~GtP~fmaPEvvrkdpy~kpvDiW~cGViLfiLL~G~~PF~~~~~---~rlye~I~~g~yd----~~-  232 (355)
T KOG0033|consen  163 VNDG--EAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQ---HRLYEQIKAGAYD----YP-  232 (355)
T ss_pred             eCCc--cccccccCCCcccCHHHhhcCCCCCcchhhhhhHHHHHHHhCCCCCCCccH---HHHHHHHhccccC----CC-
Confidence            8732  233446899999999999999999999999999999999999999987442   2233444444321    00 


Q ss_pred             hcCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 005257          598 RAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKV  635 (705)
Q Consensus       598 ~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  635 (705)
                         +..-....+....|+.+++..||.+|.|+.|.+++
T Consensus       233 ---~~~w~~is~~Ak~LvrrML~~dP~kRIta~EAL~H  267 (355)
T KOG0033|consen  233 ---SPEWDTVTPEAKSLIRRMLTVNPKKRITADEALKH  267 (355)
T ss_pred             ---CcccCcCCHHHHHHHHHHhccChhhhccHHHHhCC
Confidence               11122334667889999999999999999999875

>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=1.3e-36  Score=327.03  Aligned_cols=248  Identities=27%  Similarity=0.421  Sum_probs=207.1

Q ss_pred             eEEeecCceEEEEEEEcCCCeEEEEEEeccCCchhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEEEEeeCCCCCh
Q 005257          370 NVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSL  449 (705)
Q Consensus       370 ~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~lV~E~~~~gsL  449 (705)
                      -+||+|.||+||-|++..+...+|||.+........+.+..||.+-++|+|+|||+++|.|.+ ++.+-|.||-++||||
T Consensus       581 vVLGKGTYG~VYA~RD~~tqvrIaIKEIpekdsr~~QPLhEEIaLH~~LrHkNIVrYLGs~se-nGf~kIFMEqVPGGSL  659 (1226)
T KOG4279|consen  581 VVLGKGTYGTVYAARDMDTQVRIAIKEIPEKDSREVQPLHEEIALHSTLRHKNIVRYLGSVSE-NGFFKIFMEQVPGGSL  659 (1226)
T ss_pred             EEeecCceeEEEeeccccceeEEEeeecccccchhhccHHHHHHHHHHHhhHhHHHHhhccCC-CCeEEEEeecCCCCcH
Confidence            479999999999999999999999999988888888889999999999999999999998765 7788899999999999


Q ss_pred             hHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEc-cCCCeeeeeeccceecCCCCcceeee
Q 005257          450 DKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLD-KEMNGRLGDFGLARMHGHGQVASTTR  528 (705)
Q Consensus       450 ~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld-~~~~~kL~DFGla~~~~~~~~~~~~~  528 (705)
                      .++|+..=+...=.+..+--+.+||++||.|||+   +.|||||||-.|||++ -.|.+||+|||-++.... -.+.+..
T Consensus       660 SsLLrskWGPlKDNEstm~fYtkQILeGLkYLHe---n~IVHRDIKGDNVLvNTySGvlKISDFGTsKRLAg-inP~TET  735 (1226)
T KOG4279|consen  660 SSLLRSKWGPLKDNESTMNFYTKQILEGLKYLHE---NKIVHRDIKGDNVLVNTYSGVLKISDFGTSKRLAG-INPCTET  735 (1226)
T ss_pred             HHHHHhccCCCccchhHHHHHHHHHHHHhhhhhh---cceeeccccCCcEEEeeccceEEecccccchhhcc-CCccccc
Confidence            9999764332122777888899999999999998   9999999999999997 568899999999876643 2334556


Q ss_pred             eeccccCCCccccccC--CCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhHHHHHhhhcCCCCCHH
Q 005257          529 VVGTVGYLAPEVFSSG--RASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRAKGGFDED  606 (705)
Q Consensus       529 ~~gt~~y~APE~~~~~--~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~l~~~~~~~~~  606 (705)
                      +.||..|||||++..+  .|..++|||||||.+.||.||++||.........+.    .-|-        .+.-+.++.+
T Consensus       736 FTGTLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~ElgspqAAMF----kVGm--------yKvHP~iPee  803 (1226)
T KOG4279|consen  736 FTGTLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGSPQAAMF----KVGM--------YKVHPPIPEE  803 (1226)
T ss_pred             cccchhhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecCChhHhhh----hhcc--------eecCCCCcHH
Confidence            7899999999999775  489999999999999999999999976443211111    1111        1112456677


Q ss_pred             HHHHHHHHHHHcCCCCCCCCCCHHHHHH
Q 005257          607 EVERVLHLGLLCAYPDPRARPTMRQVVK  634 (705)
Q Consensus       607 ~~~~l~~l~~~Cl~~dP~~RPs~~evl~  634 (705)
                      .......+++.|..+||.+||+++++++
T Consensus       804 lsaeak~FilrcFepd~~~R~sA~~LL~  831 (1226)
T KOG4279|consen  804 LSAEAKNFILRCFEPDPCDRPSAKDLLQ  831 (1226)
T ss_pred             HHHHHHHHHHHHcCCCcccCccHHHhcc
Confidence            7788899999999999999999999886

>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

Probab=100.00  E-value=7.6e-36  Score=309.10  Aligned_cols=254  Identities=24%  Similarity=0.440  Sum_probs=203.9

Q ss_pred             hCCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCCchhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEEEEe
Q 005257          363 TKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYD  442 (705)
Q Consensus       363 t~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~lV~E  442 (705)
                      .++|...+.||+|+||.||++.+.. +..+|+|.+... ....+.+.+|++++++++|+||+++.+.+..  ...+++||
T Consensus         5 ~~~~~~~~~lg~g~~~~vy~~~~~~-~~~~~iK~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~--~~~~~v~e   80 (260)
T cd05073           5 RESLKLEKKLGAGQFGEVWMATYNK-HTKVAVKTMKPG-SMSVEAFLAEANVMKTLQHDKLVKLHAVVTK--EPIYIITE   80 (260)
T ss_pred             ccceeEEeEecCccceEEEEEEecC-CccEEEEecCCC-hhHHHHHHHHHHHHHhcCCCCcceEEEEEcC--CCeEEEEE
Confidence            4578889999999999999998764 566999987643 3345678999999999999999999998765  57899999


Q ss_pred             eCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecCCCC
Q 005257          443 YMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQ  522 (705)
Q Consensus       443 ~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~~~~  522 (705)
                      |+++++|.+++.+... ..+++..+..++.|++.||.|||+   .+++|+||||+||+++.++.+||+|||++.......
T Consensus        81 ~~~~~~L~~~~~~~~~-~~~~~~~~~~~~~~l~~aL~~lH~---~~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~  156 (260)
T cd05073          81 FMAKGSLLDFLKSDEG-SKQPLPKLIDFSAQIAEGMAFIEQ---RNYIHRDLRAANILVSASLVCKIADFGLARVIEDNE  156 (260)
T ss_pred             eCCCCcHHHHHHhCCc-cccCHHHHHHHHHHHHHHHHHHHh---CCccccccCcceEEEcCCCcEEECCCcceeeccCCC
Confidence            9999999999976433 368899999999999999999998   899999999999999999999999999998665433


Q ss_pred             cceeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhh-CCCCCCCCCccHHHHHHHHHHhCchhHHHHHhhhcCC
Q 005257          523 VASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLS-GRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRAKG  601 (705)
Q Consensus       523 ~~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~Ellt-G~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~l~~~~  601 (705)
                      ........++..|+|||++....++.++|||||||++||+++ |+.||......   ........+..           .
T Consensus       157 ~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~---~~~~~~~~~~~-----------~  222 (260)
T cd05073         157 YTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNP---EVIRALERGYR-----------M  222 (260)
T ss_pred             cccccCCcccccccCHhHhccCCcCccccchHHHHHHHHHHhcCCCCCCCCCHH---HHHHHHhCCCC-----------C
Confidence            222222345678999999988889999999999999999999 89998754321   11111111110           1


Q ss_pred             CCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHh
Q 005257          602 GFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLEG  638 (705)
Q Consensus       602 ~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  638 (705)
                      .........+.+++.+||+++|++||++.++.+.|+.
T Consensus       223 ~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~L~~  259 (260)
T cd05073         223 PRPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDD  259 (260)
T ss_pred             CCcccCCHHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence            1122334568899999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa

>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4

Probab=100.00  E-value=4.3e-36  Score=320.21  Aligned_cols=260  Identities=25%  Similarity=0.414  Sum_probs=205.1

Q ss_pred             CCCCcceEEeecCceEEEEEEEc-------CCCeEEEEEEeccCC-chhHHHHHHHHHHhccC-CCCCcceeeeeeeecc
Q 005257          364 KGFSEENVIGVGGNGKVYKGVLE-------GGGAEIAVKRISHEN-DGGTRAFLAEISSLGRL-KHKSLVGLRGWCKREK  434 (705)
Q Consensus       364 ~~f~~~~~LG~G~fg~Vy~~~~~-------~~~~~vavK~i~~~~-~~~~~~~~~Ei~~l~~l-~Hpniv~l~g~~~~~~  434 (705)
                      ++|...+.||+|+||.||++...       .....+|+|.++... .....++.+|++++.++ +||||++++++|.. +
T Consensus        12 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~-~   90 (314)
T cd05099          12 DRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEMELMKLIGKHKNIINLLGVCTQ-E   90 (314)
T ss_pred             HHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCCeeeEEEEEcc-C
Confidence            46778899999999999999763       234579999887543 33456789999999999 69999999998876 6


Q ss_pred             CceEEEEeeCCCCChhHHHHhcCC-------------CCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEE
Q 005257          435 GSLMLVYDYMENGSLDKWIFQCDG-------------SMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLL  501 (705)
Q Consensus       435 ~~~~lV~E~~~~gsL~~~L~~~~~-------------~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILl  501 (705)
                      +..++||||+++|+|.+++.....             ...+++.++.+++.|++.||.|||+   .+++||||||+|||+
T Consensus        91 ~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~---~gi~H~dlkp~Nill  167 (314)
T cd05099          91 GPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLES---RRCIHRDLAARNVLV  167 (314)
T ss_pred             CceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHH---CCeeeccccceeEEE
Confidence            678999999999999999976321             2358999999999999999999998   999999999999999


Q ss_pred             ccCCCeeeeeeccceecCCCCcce-eeeeeccccCCCccccccCCCCccccEEEEehhHHHHhh-CCCCCCCCCccHHHH
Q 005257          502 DKEMNGRLGDFGLARMHGHGQVAS-TTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLS-GRRPIEEGKPNLVEM  579 (705)
Q Consensus       502 d~~~~~kL~DFGla~~~~~~~~~~-~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~Ellt-G~~Pf~~~~~~~~~~  579 (705)
                      +.++.+||+|||+++......... .....++..|||||.+.+..++.++|||||||++|||++ |..||.....   ..
T Consensus       168 ~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~---~~  244 (314)
T cd05099         168 TEDNVMKIADFGLARGVHDIDYYKKTSNGRLPVKWMAPEALFDRVYTHQSDVWSFGILMWEIFTLGGSPYPGIPV---EE  244 (314)
T ss_pred             cCCCcEEEccccccccccccccccccccCCCCccccCHHHHccCCcCccchhhHHHHHHHHHHhCCCCCCCCCCH---HH
Confidence            999999999999998654322111 111233467999999988889999999999999999999 8889865332   12


Q ss_pred             HHHHHHhCchhHHHHHhhhcCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHhccc
Q 005257          580 VWELMVQGKLLDALDARLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLEGKIE  641 (705)
Q Consensus       580 v~~~~~~~~~~~~id~~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~  641 (705)
                      .......+..           ...+......+.+++.+||+.+|++||++.++++.|+....
T Consensus       245 ~~~~~~~~~~-----------~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~~~~~  295 (314)
T cd05099         245 LFKLLREGHR-----------MDKPSNCTHELYMLMRECWHAVPTQRPTFKQLVEALDKVLA  295 (314)
T ss_pred             HHHHHHcCCC-----------CCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHH
Confidence            2222222111           11222334567899999999999999999999999986654

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=100.00  E-value=1e-35  Score=311.38  Aligned_cols=268  Identities=23%  Similarity=0.404  Sum_probs=205.6

Q ss_pred             CCCcceEEeecCceEEEEEEEcC----CCeEEEEEEeccCCch-hHHHHHHHHHHhccCCCCCcceeeeeeeec-cCceE
Q 005257          365 GFSEENVIGVGGNGKVYKGVLEG----GGAEIAVKRISHENDG-GTRAFLAEISSLGRLKHKSLVGLRGWCKRE-KGSLM  438 (705)
Q Consensus       365 ~f~~~~~LG~G~fg~Vy~~~~~~----~~~~vavK~i~~~~~~-~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~-~~~~~  438 (705)
                      .|...+.||+|+||.||++.+..    ++..+|||.++..... ..+.|.+|+++++.++||||+++++++... +...+
T Consensus         5 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~~~~~~~   84 (284)
T cd05038           5 HLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLDHENIVKYKGVCEKPGGRSLR   84 (284)
T ss_pred             hchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccchHHHHHHHHHHHHHHhCCCCChheEEeeeecCCCCceE
Confidence            46667899999999999999753    3788999999766443 567899999999999999999999988642 34689


Q ss_pred             EEEeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceec
Q 005257          439 LVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMH  518 (705)
Q Consensus       439 lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~  518 (705)
                      +||||+++++|.+++.....  .+++..+..++.|++.||+|||+   .+++|+||||+||+++.++.++|+|||++...
T Consensus        85 lv~e~~~~~~l~~~l~~~~~--~~~~~~~~~~~~~l~~aL~~lH~---~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~  159 (284)
T cd05038          85 LIMEYLPSGSLRDYLQRHRD--QINLKRLLLFSSQICKGMDYLGS---QRYIHRDLAARNILVESEDLVKISDFGLAKVL  159 (284)
T ss_pred             EEEecCCCCCHHHHHHhCcc--ccCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHhEEEcCCCCEEEccccccccc
Confidence            99999999999999976443  58999999999999999999998   99999999999999999999999999999876


Q ss_pred             CCCCcce--eeeeeccccCCCccccccCCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHH---HhCchhHHH
Q 005257          519 GHGQVAS--TTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELM---VQGKLLDAL  593 (705)
Q Consensus       519 ~~~~~~~--~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~---~~~~~~~~i  593 (705)
                      .......  .....++..|+|||.+.+..++.++||||||+++|||++|+.|+.........+.....   ....+.+.+
T Consensus       160 ~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (284)
T cd05038         160 PEDKDYYYVKEPGESPIFWYAPECLRTSKFSSASDVWSFGVTLYELFTYGDPSQSPPAEFLRMIGIAQGQMIVTRLLELL  239 (284)
T ss_pred             ccCCcceeccCCCCCcccccCcHHHccCCCCcccchHHHhhhhheeeccCCCcccccchhccccccccccccHHHHHHHH
Confidence            5332211  11123456799999998888999999999999999999999998653221111000000   000001111


Q ss_pred             HHhhhcCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHhc
Q 005257          594 DARLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLEGK  639 (705)
Q Consensus       594 d~~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~  639 (705)
                      .....  ...+..+...+.+++.+||+.+|++||++.|+++.|+..
T Consensus       240 ~~~~~--~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~i  283 (284)
T cd05038         240 KEGER--LPRPPSCPDEVYDLMKLCWEAEPQDRPSFADLILIVDRL  283 (284)
T ss_pred             HcCCc--CCCCccCCHHHHHHHHHHhccChhhCCCHHHHHHHHhhc
Confidence            11111  111223446789999999999999999999999999753

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut

>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=100.00  E-value=1.4e-36  Score=314.34  Aligned_cols=241  Identities=23%  Similarity=0.400  Sum_probs=191.3

Q ss_pred             eEEeecCceEEEEEEEcCCCe-------EEEEEEeccCCchhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEEEEe
Q 005257          370 NVIGVGGNGKVYKGVLEGGGA-------EIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYD  442 (705)
Q Consensus       370 ~~LG~G~fg~Vy~~~~~~~~~-------~vavK~i~~~~~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~lV~E  442 (705)
                      +.||+|+||.||+|.....+.       .+|+|.+........+.+.+|+.+++.++|||++++++++.. +...++|||
T Consensus         1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~-~~~~~lv~e   79 (258)
T cd05078           1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSHRNYSESFFEAASMMSQLSHKHLVLNYGVCVC-GDESIMVQE   79 (258)
T ss_pred             CCCCcccchhheeeeecccccccccccchhhHHhhcchhHHHHHHHHHHHHHHHhCCCCChhheeeEEEe-CCCcEEEEe
Confidence            369999999999999865443       488888765555556788999999999999999999999886 567899999


Q ss_pred             eCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCC--------eeeeeecc
Q 005257          443 YMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMN--------GRLGDFGL  514 (705)
Q Consensus       443 ~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~--------~kL~DFGl  514 (705)
                      |+++|+|.+++.....  .+++..++.++.||+.||.|||+   .+|+||||||+||+++.++.        ++++|||+
T Consensus        80 ~~~~g~L~~~l~~~~~--~~~~~~~~~~~~qi~~~l~~lH~---~~iiH~dlkp~nili~~~~~~~~~~~~~~~l~d~g~  154 (258)
T cd05078          80 YVKFGSLDTYLKKNKN--LINISWKLEVAKQLAWALHFLED---KGLTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPGI  154 (258)
T ss_pred             cCCCCcHHHHHhcCCC--CCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCccceEEEecccccccCCCceEEeccccc
Confidence            9999999999976443  58999999999999999999998   99999999999999987765        58999998


Q ss_pred             ceecCCCCcceeeeeeccccCCCcccccc-CCCCccccEEEEehhHHHHhhCC-CCCCCCCccHHHHHHHHHHhCchhHH
Q 005257          515 ARMHGHGQVASTTRVVGTVGYLAPEVFSS-GRASTQTDVFGFGILILEVLSGR-RPIEEGKPNLVEMVWELMVQGKLLDA  592 (705)
Q Consensus       515 a~~~~~~~~~~~~~~~gt~~y~APE~~~~-~~~s~ksDVwS~Gvvl~ElltG~-~Pf~~~~~~~~~~v~~~~~~~~~~~~  592 (705)
                      +......     ....++..|+|||++.+ ..++.++|||||||++|||++|. .|+.......  .. .         .
T Consensus       155 ~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~~~~--~~-~---------~  217 (258)
T cd05078         155 SITVLPK-----EILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLSALDSQK--KL-Q---------F  217 (258)
T ss_pred             ccccCCc-----hhccccCCccCchhccCCCCCCchhhHHHHHHHHHHHHcCCCCChhhccHHH--HH-H---------H
Confidence            8654322     22467889999999976 45799999999999999999985 5544322110  00 0         0


Q ss_pred             HHHhhhcCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHH
Q 005257          593 LDARLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLE  637 (705)
Q Consensus       593 id~~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  637 (705)
                      ...+    ...+......+.+++..||+.||++|||++++++.|+
T Consensus       218 ~~~~----~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l~  258 (258)
T cd05078         218 YEDR----HQLPAPKWTELANLINQCMDYEPDFRPSFRAIIRDLN  258 (258)
T ss_pred             HHcc----ccCCCCCcHHHHHHHHHHhccChhhCCCHHHHHHhcC
Confidence            0111    1122233456889999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity

>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1

Probab=100.00  E-value=2.5e-36  Score=320.94  Aligned_cols=261  Identities=26%  Similarity=0.426  Sum_probs=206.5

Q ss_pred             hCCCCcceEEeecCceEEEEEEEcC-------CCeEEEEEEeccCC-chhHHHHHHHHHHhccC-CCCCcceeeeeeeec
Q 005257          363 TKGFSEENVIGVGGNGKVYKGVLEG-------GGAEIAVKRISHEN-DGGTRAFLAEISSLGRL-KHKSLVGLRGWCKRE  433 (705)
Q Consensus       363 t~~f~~~~~LG~G~fg~Vy~~~~~~-------~~~~vavK~i~~~~-~~~~~~~~~Ei~~l~~l-~Hpniv~l~g~~~~~  433 (705)
                      .++|...+.||+|+||.||++....       ....+|+|.++... .....++.+|++++.++ +||||++++++|.. 
T Consensus        17 ~~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~-   95 (307)
T cd05098          17 RDRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQ-   95 (307)
T ss_pred             hHHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCChHHHHHHHHHHHHHHHhcCCCCEeeEEEEEec-
Confidence            3568889999999999999998643       23569999987543 34456788999999999 79999999999876 


Q ss_pred             cCceEEEEeeCCCCChhHHHHhcCC-------------CCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeE
Q 005257          434 KGSLMLVYDYMENGSLDKWIFQCDG-------------SMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVL  500 (705)
Q Consensus       434 ~~~~~lV~E~~~~gsL~~~L~~~~~-------------~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NIL  500 (705)
                      .+..++||||+++|+|.+++.....             ...+++.++++++.|++.||+|||+   .+++||||||+||+
T Consensus        96 ~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~---~gi~H~dlkp~Nil  172 (307)
T cd05098          96 DGPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLAS---KKCIHRDLAARNVL  172 (307)
T ss_pred             CCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHH---CCcccccccHHheE
Confidence            6688999999999999999976432             1258999999999999999999998   99999999999999


Q ss_pred             EccCCCeeeeeeccceecCCCCcce-eeeeeccccCCCccccccCCCCccccEEEEehhHHHHhh-CCCCCCCCCccHHH
Q 005257          501 LDKEMNGRLGDFGLARMHGHGQVAS-TTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLS-GRRPIEEGKPNLVE  578 (705)
Q Consensus       501 ld~~~~~kL~DFGla~~~~~~~~~~-~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~Ellt-G~~Pf~~~~~~~~~  578 (705)
                      ++.++.+||+|||+++......... .....+++.|+|||++.+..++.++|||||||++|||++ |..||.....   +
T Consensus       173 l~~~~~~kL~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~~g~~p~~~~~~---~  249 (307)
T cd05098         173 VTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPV---E  249 (307)
T ss_pred             EcCCCcEEECCCcccccccccchhhccccCCCccceeChHHhccCCCCcHHHHHHHHHHHHHHHcCCCCCCCcCCH---H
Confidence            9999999999999997654322111 111234568999999988889999999999999999998 8888865331   1


Q ss_pred             HHHHHHHhCchhHHHHHhhhcCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHhccc
Q 005257          579 MVWELMVQGKLLDALDARLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLEGKIE  641 (705)
Q Consensus       579 ~v~~~~~~~~~~~~id~~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~  641 (705)
                      .+......+.         .  ...+......+.+++..||+.+|++||++.++++.|+...+
T Consensus       250 ~~~~~~~~~~---------~--~~~~~~~~~~~~~li~~~l~~~p~~Rps~~evl~~l~~~~~  301 (307)
T cd05098         250 ELFKLLKEGH---------R--MDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILA  301 (307)
T ss_pred             HHHHHHHcCC---------C--CCCCCcCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHH
Confidence            1112222111         1  11223345678889999999999999999999999987655

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]

Probab=100.00  E-value=8.1e-37  Score=334.61  Aligned_cols=254  Identities=24%  Similarity=0.401  Sum_probs=210.3

Q ss_pred             CCcceEEeecCceEEEEEEEcCCC----eEEEEEEeccC-CchhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEEE
Q 005257          366 FSEENVIGVGGNGKVYKGVLEGGG----AEIAVKRISHE-NDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLV  440 (705)
Q Consensus       366 f~~~~~LG~G~fg~Vy~~~~~~~~----~~vavK~i~~~-~~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~lV  440 (705)
                      ....++||+|+||+||||.+-..+    .+||+|++... ..+...++++|.-+|.+|+|||+++++|+|...  .+.||
T Consensus       698 lkk~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~~~~s~e~LdeAl~masldHpnl~RLLgvc~~s--~~qlv  775 (1177)
T KOG1025|consen  698 LKKDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTSPKASIELLDEALRMASLDHPNLLRLLGVCMLS--TLQLV  775 (1177)
T ss_pred             hhhhceeccccceeEEeeeEecCCceecceeEEEEeeccCCchhhHHHHHHHHHHhcCCCchHHHHhhhcccc--hHHHH
Confidence            455789999999999999985444    57999988655 344578899999999999999999999999863  37899


Q ss_pred             EeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecCC
Q 005257          441 YDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGH  520 (705)
Q Consensus       441 ~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~~  520 (705)
                      ++||+.|+|.++++..+.  .+.....+.|..|||+||.|||+   +.++||||.++|||+..-..+||.|||+++....
T Consensus       776 tq~mP~G~LlDyvr~hr~--~igsq~lLnw~~QIAkgM~YLe~---qrlVHrdLaaRNVLVksP~hvkitdfgla~ll~~  850 (1177)
T KOG1025|consen  776 TQLMPLGCLLDYVREHRD--NIGSQDLLNWCYQIAKGMKYLEE---QRLVHRDLAARNVLVKSPNHVKITDFGLAKLLAP  850 (1177)
T ss_pred             HHhcccchHHHHHHHhhc--cccHHHHHHHHHHHHHHHHHHHh---cchhhhhhhhhheeecCCCeEEEEecchhhccCc
Confidence            999999999999987544  68899999999999999999998   9999999999999999999999999999998876


Q ss_pred             CCcceeee-eeccccCCCccccccCCCCccccEEEEehhHHHHhh-CCCCCCCCCccHHHHHHHHHHhCchhHHHHHhhh
Q 005257          521 GQVASTTR-VVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLS-GRRPIEEGKPNLVEMVWELMVQGKLLDALDARLR  598 (705)
Q Consensus       521 ~~~~~~~~-~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~Ellt-G~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~l~  598 (705)
                      +....... ..-.+.|||-|.+....++.++|||||||.+||++| |..|+++...   +.+-+.+..|+.         
T Consensus       851 d~~ey~~~~gK~pikwmale~i~~~~~thqSDVWsfGVtiWElmTFGa~Py~gi~~---~eI~dlle~geR---------  918 (1177)
T KOG1025|consen  851 DEKEYSAPGGKVPIKWMALESIRIRKYTHQSDVWSFGVTIWELMTFGAKPYDGIPA---EEIPDLLEKGER---------  918 (1177)
T ss_pred             ccccccccccccCcHHHHHHHhhccCCCchhhhhhhhhhHHHHHhcCCCccCCCCH---HHhhHHHhcccc---------
Confidence            55433221 223678999999999999999999999999999999 9999987542   222233333322         


Q ss_pred             cCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHhcc
Q 005257          599 AKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLEGKI  640 (705)
Q Consensus       599 ~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~  640 (705)
                        ...++-+...+..++.+||..|+..||+++++...+.++.
T Consensus       919 --LsqPpiCtiDVy~~mvkCwmid~~~rp~fkel~~~fs~~a  958 (1177)
T KOG1025|consen  919 --LSQPPICTIDVYMVMVKCWMIDADSRPTFKELAEEFSRMA  958 (1177)
T ss_pred             --CCCCCCccHHHHHHHHHHhccCcccCccHHHHHHHHHHHh
Confidence              2234556677889999999999999999999998887654

>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

Probab=100.00  E-value=7.1e-36  Score=313.13  Aligned_cols=263  Identities=27%  Similarity=0.381  Sum_probs=200.7

Q ss_pred             CCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCC--chhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEEEEe
Q 005257          365 GFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHEN--DGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYD  442 (705)
Q Consensus       365 ~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~--~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~lV~E  442 (705)
                      +|+..+.||+|++|.||+|+...++..||||+++...  ....+.+.+|+.++++++||||+++++++.. ++.+++|||
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~~v~e   79 (285)
T cd07861           1 DYTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNIVCLQDVLMQ-ESRLYLIFE   79 (285)
T ss_pred             CceEeeEecccCceEEEEEEECCCCcEEEEEEeccccccCCchHHHHHHHHHHHhcCCCCEeeeEEEEee-CCeEEEEEe
Confidence            4677889999999999999999889999999986542  2334678899999999999999999999876 678999999


Q ss_pred             eCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecCCCC
Q 005257          443 YMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQ  522 (705)
Q Consensus       443 ~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~~~~  522 (705)
                      |++ ++|.+++........+++.++..++.|++.||.|||+   .+++|+||||+||+++.++.+||+|||++.......
T Consensus        80 ~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~---~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~  155 (285)
T cd07861          80 FLS-MDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHS---RRVLHRDLKPQNLLIDNKGVIKLADFGLARAFGIPV  155 (285)
T ss_pred             cCC-CCHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHHh---CCeeecCCCHHHEEEcCCCcEEECcccceeecCCCc
Confidence            997 6898888765444478999999999999999999998   999999999999999999999999999997654332


Q ss_pred             cceeeeeeccccCCCccccccC-CCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHh-Cch----------h
Q 005257          523 VASTTRVVGTVGYLAPEVFSSG-RASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQ-GKL----------L  590 (705)
Q Consensus       523 ~~~~~~~~gt~~y~APE~~~~~-~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~-~~~----------~  590 (705)
                      . ......+++.|+|||++.+. .++.++|||||||++|||++|+.||......  +........ +..          .
T Consensus       156 ~-~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~  232 (285)
T cd07861         156 R-VYTHEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGDSEI--DQLFRIFRILGTPTEDVWPGVTSL  232 (285)
T ss_pred             c-cccCCcccccccChHHhcCCCCcCcHHHHHHHHHHHHHHHHCCCCCCCCCHH--HHHHHHHHHhCCCChhhhhcchhh
Confidence            1 11223568899999988654 5788999999999999999999999764321  111111110 000          0


Q ss_pred             HHHHHhhhcCCC-----CCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 005257          591 DALDARLRAKGG-----FDEDEVERVLHLGLLCAYPDPRARPTMRQVVKV  635 (705)
Q Consensus       591 ~~id~~l~~~~~-----~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  635 (705)
                      ............     ........+.+++..||+.||++|||+.+++++
T Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~ll~~  282 (285)
T cd07861         233 PDYKNTFPKWKKGSLRSAVKNLDEDGLDLLEKMLIYDPAKRISAKKALNH  282 (285)
T ss_pred             HHHHhhccccCcchhHHhcCCCCHHHHHHHHHHhcCChhhCCCHHHHhcC
Confidence            000000000000     001123566789999999999999999998763

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2

>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=2.7e-36  Score=315.75  Aligned_cols=254  Identities=24%  Similarity=0.364  Sum_probs=205.9

Q ss_pred             hCCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCCchhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEEEEe
Q 005257          363 TKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYD  442 (705)
Q Consensus       363 t~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~lV~E  442 (705)
                      .++|...+.||+|+||.||+|.+..++..+|+|.+........+.+.+|++++++++|||++++++.+.. +...++|||
T Consensus         4 ~~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~lv~e   82 (280)
T cd06611           4 NDIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIESEEELEDFMVEIDILSECKHPNIVGLYEAYFY-ENKLWILIE   82 (280)
T ss_pred             hhHHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeCCHHHHHHHHHHHHHHHhCCCCceeEEEEEEec-CCeEEEEee
Confidence            3568888899999999999999988899999999977666667789999999999999999999998876 678899999


Q ss_pred             eCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecCCCC
Q 005257          443 YMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQ  522 (705)
Q Consensus       443 ~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~~~~  522 (705)
                      |+++++|.+++.+...  .+++.++..++.|++.||.|||+   .+++|+||||+||+++.++.++|+|||++.......
T Consensus        83 ~~~~~~L~~~~~~~~~--~l~~~~~~~~~~ql~~~l~~lh~---~~i~h~dl~p~nili~~~~~~~l~d~g~~~~~~~~~  157 (280)
T cd06611          83 FCDGGALDSIMLELER--GLTEPQIRYVCRQMLEALNFLHS---HKVIHRDLKAGNILLTLDGDVKLADFGVSAKNKSTL  157 (280)
T ss_pred             ccCCCcHHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCChhhEEECCCCCEEEccCccchhhcccc
Confidence            9999999999876432  68999999999999999999998   999999999999999999999999999987654322


Q ss_pred             cceeeeeeccccCCCccccc-----cCCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhHHHHHhh
Q 005257          523 VASTTRVVGTVGYLAPEVFS-----SGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDARL  597 (705)
Q Consensus       523 ~~~~~~~~gt~~y~APE~~~-----~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~l  597 (705)
                      . ......|++.|+|||.+.     ...++.++|||||||++|||++|+.||......  .. ...+..+...     . 
T Consensus       158 ~-~~~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~~~~--~~-~~~~~~~~~~-----~-  227 (280)
T cd06611         158 Q-KRDTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHELNPM--RV-LLKILKSEPP-----T-  227 (280)
T ss_pred             c-ccceeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCcccCCHH--HH-HHHHhcCCCC-----C-
Confidence            2 223357899999999975     345678999999999999999999999764321  11 1111111100     0 


Q ss_pred             hcCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 005257          598 RAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKV  635 (705)
Q Consensus       598 ~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  635 (705)
                         ...+......+.+++..||+.+|.+||++.++++.
T Consensus       228 ---~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~  262 (280)
T cd06611         228 ---LDQPSKWSSSFNDFLKSCLVKDPDDRPTAAELLKH  262 (280)
T ss_pred             ---cCCcccCCHHHHHHHHHHhccChhhCcCHHHHhcC
Confidence               11122234567889999999999999999999875

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti

>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

Probab=100.00  E-value=6.2e-36  Score=308.70  Aligned_cols=249  Identities=25%  Similarity=0.367  Sum_probs=201.3

Q ss_pred             eEEeecCceEEEEEEEcC-CC--eEEEEEEeccCCc-hhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEEEEeeCC
Q 005257          370 NVIGVGGNGKVYKGVLEG-GG--AEIAVKRISHEND-GGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYME  445 (705)
Q Consensus       370 ~~LG~G~fg~Vy~~~~~~-~~--~~vavK~i~~~~~-~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~lV~E~~~  445 (705)
                      +.||+|++|.||+|.+.. ++  ..||||.+..... ...+.+.+|+.++++++||||+++++.+..  ...++||||++
T Consensus         1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~--~~~~~v~e~~~   78 (257)
T cd05040           1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDHENLIRLYGVVLT--HPLMMVTELAP   78 (257)
T ss_pred             CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccHHHHHHHHHHHHHHhhcCCCCccceeEEEcC--CeEEEEEEecC
Confidence            468999999999999864 33  3699999987655 567789999999999999999999998875  67899999999


Q ss_pred             CCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecCCCCcce
Q 005257          446 NGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVAS  525 (705)
Q Consensus       446 ~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~~~~~~~  525 (705)
                      +++|.+++.+... ..+++..++.++.|++.||+|||+   .+++|+||||+||+++.++.+||+|||+++.........
T Consensus        79 ~~~L~~~l~~~~~-~~~~~~~~~~~~~qi~~~L~~lH~---~~i~H~di~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~  154 (257)
T cd05040          79 LGSLLDRLRKDAL-GHFLISTLCDYAVQIANGMRYLES---KRFIHRDLAARNILLASDDKVKIGDFGLMRALPQNEDHY  154 (257)
T ss_pred             CCcHHHHHHhccc-ccCcHHHHHHHHHHHHHHHHHHHh---CCccccccCcccEEEecCCEEEeccccccccccccccce
Confidence            9999999977543 368999999999999999999998   999999999999999999999999999998765432211


Q ss_pred             --eeeeeccccCCCccccccCCCCccccEEEEehhHHHHhh-CCCCCCCCCccHHHHHHHHHHhCchhHHHHHhhhcCCC
Q 005257          526 --TTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLS-GRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRAKGG  602 (705)
Q Consensus       526 --~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~Ellt-G~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~l~~~~~  602 (705)
                        .....++..|+|||++.+..++.++|||||||++|||++ |+.||......  +........+.       .    ..
T Consensus       155 ~~~~~~~~~~~y~~pE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~--~~~~~~~~~~~-------~----~~  221 (257)
T cd05040         155 VMEEHLKVPFAWCAPESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWAGLSGS--QILKKIDKEGE-------R----LE  221 (257)
T ss_pred             ecccCCCCCceecCHHHhcccCcCchhhhHHHHHHHHHHHhCCCCCCCCCCHH--HHHHHHHhcCC-------c----CC
Confidence              112356789999999988889999999999999999998 99999654321  11111110000       0    11


Q ss_pred             CCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHH
Q 005257          603 FDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLE  637 (705)
Q Consensus       603 ~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  637 (705)
                      .+...+..+.+++..||+.+|++||++.++++.|.
T Consensus       222 ~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~  256 (257)
T cd05040         222 RPEACPQDIYNVMLQCWAHNPADRPTFAALREFLP  256 (257)
T ss_pred             CCccCCHHHHHHHHHHCCCCcccCCCHHHHHHHhc
Confidence            12233467889999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and

>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

Probab=100.00  E-value=4.5e-36  Score=317.44  Aligned_cols=251  Identities=24%  Similarity=0.380  Sum_probs=205.7

Q ss_pred             CCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCCchhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEEEEee
Q 005257          364 KGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDY  443 (705)
Q Consensus       364 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~lV~E~  443 (705)
                      ++|+..+.||.|++|.||+|....+++.||+|.+........+.+.+|+.+++.++|||++++++++.. ....++|+||
T Consensus        19 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~lv~e~   97 (296)
T cd06655          19 KKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQPKKELIINEILVMKELKNPNIVNFLDSFLV-GDELFVVMEY   97 (296)
T ss_pred             ceEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEecccCchHHHHHHHHHHHHhcCCCceeeeeeeEec-CceEEEEEEe
Confidence            468889999999999999999988899999999976655566788999999999999999999998876 6789999999


Q ss_pred             CCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecCCCCc
Q 005257          444 MENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQV  523 (705)
Q Consensus       444 ~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~~~~~  523 (705)
                      +++++|..++...    .+++.++..++.|++.||.|||+   .+++|+||||+||+++.++.+||+|||++........
T Consensus        98 ~~~~~L~~~~~~~----~l~~~~~~~i~~~l~~al~~LH~---~~i~H~dL~p~Nili~~~~~~kl~dfg~~~~~~~~~~  170 (296)
T cd06655          98 LAGGSLTDVVTET----CMDEAQIAAVCRECLQALEFLHA---NQVIHRDIKSDNVLLGMDGSVKLTDFGFCAQITPEQS  170 (296)
T ss_pred             cCCCcHHHHHHhc----CCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEECCCCCEEEccCccchhcccccc
Confidence            9999999988542    58999999999999999999998   9999999999999999999999999999876543322


Q ss_pred             ceeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhHHHHHhhhcCCCC
Q 005257          524 ASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRAKGGF  603 (705)
Q Consensus       524 ~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~l~~~~~~  603 (705)
                      . .....|+..|+|||.+.+..++.++|||||||++|||++|+.||....+.  ..... +.....     +.    ...
T Consensus       171 ~-~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~~lltg~~pf~~~~~~--~~~~~-~~~~~~-----~~----~~~  237 (296)
T cd06655         171 K-RSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPL--RALYL-IATNGT-----PE----LQN  237 (296)
T ss_pred             c-CCCcCCCccccCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH--HHHHH-HHhcCC-----cc----cCC
Confidence            1 22346889999999998888999999999999999999999999765431  11111 110000     00    111


Q ss_pred             CHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 005257          604 DEDEVERVLHLGLLCAYPDPRARPTMRQVVKV  635 (705)
Q Consensus       604 ~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  635 (705)
                      +......+.+++.+||..||++||++.+++++
T Consensus       238 ~~~~~~~~~~li~~~l~~dp~~Rpt~~~il~~  269 (296)
T cd06655         238 PEKLSPIFRDFLNRCLEMDVEKRGSAKELLQH  269 (296)
T ss_pred             cccCCHHHHHHHHHHhhcChhhCCCHHHHhhC
Confidence            22234567889999999999999999999873

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3

Probab=100.00  E-value=6.1e-36  Score=311.38  Aligned_cols=254  Identities=24%  Similarity=0.399  Sum_probs=191.5

Q ss_pred             eEEeecCceEEEEEEEcC--CCeEEEEEEeccCCc-hhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEEEEeeCCC
Q 005257          370 NVIGVGGNGKVYKGVLEG--GGAEIAVKRISHEND-GGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMEN  446 (705)
Q Consensus       370 ~~LG~G~fg~Vy~~~~~~--~~~~vavK~i~~~~~-~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~lV~E~~~~  446 (705)
                      +.||+|+||.||+|...+  ++..+|+|.++.... .....+.+|+.++++++||||+++++++.. ....++||||+++
T Consensus         1 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-~~~~~lv~e~~~~   79 (269)
T cd05087           1 KEIGNGWFGKVILGEVNSGYTPAQVVVKELRVSASVQEQMKFLEEAQPYRSLQHSNLLQCLGQCTE-VTPYLLVMEFCPL   79 (269)
T ss_pred             CcccccCCceEEEEEEcCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcC-CCCcEEEEECCCC
Confidence            358999999999998653  356799998875543 334578999999999999999999998876 6678999999999


Q ss_pred             CChhHHHHhcCC--CCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecCCCCcc
Q 005257          447 GSLDKWIFQCDG--SMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVA  524 (705)
Q Consensus       447 gsL~~~L~~~~~--~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~~~~~~  524 (705)
                      |+|.+++.....  ...+++..+..++.|++.||.|||+   .+++||||||+||+++.++++||+|||+++........
T Consensus        80 g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~---~~i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~~~~  156 (269)
T cd05087          80 GDLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHK---NNFIHSDLALRNCLLTADLTVKIGDYGLSHNKYKEDYY  156 (269)
T ss_pred             CcHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHH---CCEeccccCcceEEEcCCCcEEECCccccccccCccee
Confidence            999999975432  2246778888999999999999998   99999999999999999999999999999754333221


Q ss_pred             e-eeeeeccccCCCccccccC-------CCCccccEEEEehhHHHHhh-CCCCCCCCCccHHHHHHHHHHhCchhHHHHH
Q 005257          525 S-TTRVVGTVGYLAPEVFSSG-------RASTQTDVFGFGILILEVLS-GRRPIEEGKPNLVEMVWELMVQGKLLDALDA  595 (705)
Q Consensus       525 ~-~~~~~gt~~y~APE~~~~~-------~~s~ksDVwS~Gvvl~Ellt-G~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~  595 (705)
                      . .....|+..|+|||++...       .++.++|||||||++|||++ |+.||.......   .......+...     
T Consensus       157 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~---~~~~~~~~~~~-----  228 (269)
T cd05087         157 VTPDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHLSDEQ---VLTYTVREQQL-----  228 (269)
T ss_pred             ecCCCcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCCCCChHH---HHHHHhhcccC-----
Confidence            1 1224567889999998642       35789999999999999996 999997643311   11111111000     


Q ss_pred             hhhcCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHH
Q 005257          596 RLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLE  637 (705)
Q Consensus       596 ~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  637 (705)
                      +.. .........+.+.+++..|| .+|++|||+++|++.|+
T Consensus       229 ~~~-~~~~~~~~~~~~~~l~~~c~-~~P~~Rpt~~~l~~~l~  268 (269)
T cd05087         229 KLP-KPRLKLPLSDRWYEVMQFCW-LQPEQRPSAEEVHLLLS  268 (269)
T ss_pred             CCC-CCccCCCCChHHHHHHHHHh-cCcccCCCHHHHHHHhc
Confidence            000 01111123345777889999 58999999999998875

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells

>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8

Probab=100.00  E-value=3.1e-36  Score=321.47  Aligned_cols=198  Identities=26%  Similarity=0.363  Sum_probs=162.5

Q ss_pred             ceEEeecCceEEEEEEEcC--CCeEEEEEEeccCCchhHHHHHHHHHHhccCCCCCcceeeeeeeec-cCceEEEEeeCC
Q 005257          369 ENVIGVGGNGKVYKGVLEG--GGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKRE-KGSLMLVYDYME  445 (705)
Q Consensus       369 ~~~LG~G~fg~Vy~~~~~~--~~~~vavK~i~~~~~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~-~~~~~lV~E~~~  445 (705)
                      .++||+|+||.||+|....  +++.+|+|.+....  ....+.+|++++++++||||+++++++... +...+++|||+.
T Consensus         6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~   83 (317)
T cd07868           6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTG--ISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAE   83 (317)
T ss_pred             ccccccCCCeEEEEEEEccCCCCceEEEEEECCCC--CcHHHHHHHHHHHhcCCCCCcceeeeEecCCCcEEEEEEeccC
Confidence            4679999999999999753  56889999986432  235678899999999999999999987542 446789999996


Q ss_pred             CCChhHHHHhcC------CCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEE----ccCCCeeeeeeccc
Q 005257          446 NGSLDKWIFQCD------GSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLL----DKEMNGRLGDFGLA  515 (705)
Q Consensus       446 ~gsL~~~L~~~~------~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILl----d~~~~~kL~DFGla  515 (705)
                       ++|..++....      ....+++..+..++.||+.||.|||+   .+|+||||||+|||+    +.++.+||+|||++
T Consensus        84 -~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~---~~ivHrDlkp~Nil~~~~~~~~~~~kl~DfG~a  159 (317)
T cd07868          84 -HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHA---NWVLHRDLKPANILVMGEGPERGRVKIADMGFA  159 (317)
T ss_pred             -CCHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHh---CCEEcCCCCHHHEEEecCCCCcCcEEEeecCce
Confidence             48888775321      12258999999999999999999998   999999999999999    45678999999999


Q ss_pred             eecCCCCcc--eeeeeeccccCCCcccccc-CCCCccccEEEEehhHHHHhhCCCCCCCC
Q 005257          516 RMHGHGQVA--STTRVVGTVGYLAPEVFSS-GRASTQTDVFGFGILILEVLSGRRPIEEG  572 (705)
Q Consensus       516 ~~~~~~~~~--~~~~~~gt~~y~APE~~~~-~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~  572 (705)
                      +........  ......||+.|+|||++.+ ..++.++||||+||++|||++|+.||...
T Consensus       160 ~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~  219 (317)
T cd07868         160 RLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCR  219 (317)
T ss_pred             eccCCCCccccccCCccccccccCCHHHcCCCCcCchhhHHHHHHHHHHHHhCCCCccCC
Confidence            876543221  2234578999999999876 45899999999999999999999999754

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p

>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

Probab=100.00  E-value=3.5e-36  Score=312.56  Aligned_cols=254  Identities=25%  Similarity=0.373  Sum_probs=202.3

Q ss_pred             CCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCCchhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEEEEee
Q 005257          364 KGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDY  443 (705)
Q Consensus       364 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~lV~E~  443 (705)
                      ++|...+.||+|+||.||+|....+++.||+|.++.........+.+|+.+++.++||||+++++.+.. ++..++|+||
T Consensus         9 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~~~~l~h~~ii~~~~~~~~-~~~~~lv~e~   87 (267)
T cd06645           9 EDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEPGEDFAVVQQEIIMMKDCKHSNIVAYFGSYLR-RDKLWICMEF   87 (267)
T ss_pred             HHHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCeeeEEEEEEe-CCEEEEEEec
Confidence            356677889999999999999998899999999876655556678899999999999999999998876 6788999999


Q ss_pred             CCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecCCCCc
Q 005257          444 MENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQV  523 (705)
Q Consensus       444 ~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~~~~~  523 (705)
                      +++++|.+++....   .+++.++..++.|++.||.|||+   .+++|+||||+||+++.++.+||+|||++....... 
T Consensus        88 ~~~~~L~~~~~~~~---~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~~-  160 (267)
T cd06645          88 CGGGSLQDIYHVTG---PLSESQIAYVSRETLQGLYYLHS---KGKMHRDIKGANILLTDNGHVKLADFGVSAQITATI-  160 (267)
T ss_pred             cCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEECCCCCEEECcceeeeEccCcc-
Confidence            99999999986543   68999999999999999999998   899999999999999999999999999987654322 


Q ss_pred             ceeeeeeccccCCCccccc---cCCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhHHHHHhhhcC
Q 005257          524 ASTTRVVGTVGYLAPEVFS---SGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRAK  600 (705)
Q Consensus       524 ~~~~~~~gt~~y~APE~~~---~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~l~~~  600 (705)
                      .......|+..|+|||++.   ...++.++|||||||++|||++|+.||....+..  .+... ......   .+.... 
T Consensus       161 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~~~--~~~~~-~~~~~~---~~~~~~-  233 (267)
T cd06645         161 AKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHPMR--ALFLM-TKSNFQ---PPKLKD-  233 (267)
T ss_pred             cccccccCcccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCcccccchh--hHHhh-hccCCC---CCcccc-
Confidence            1223357899999999974   4568899999999999999999999986543211  11111 111100   000000 


Q ss_pred             CCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 005257          601 GGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKV  635 (705)
Q Consensus       601 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  635 (705)
                         .......+.+++..|++.+|++||++.+++++
T Consensus       234 ---~~~~~~~~~~li~~~l~~~P~~R~~~~~ll~~  265 (267)
T cd06645         234 ---KMKWSNSFHHFVKMALTKNPKKRPTAEKLLQH  265 (267)
T ss_pred             ---cCCCCHHHHHHHHHHccCCchhCcCHHHHhcC
Confidence               01123457889999999999999999998763

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

Probab=100.00  E-value=1.3e-35  Score=310.66  Aligned_cols=257  Identities=23%  Similarity=0.374  Sum_probs=206.0

Q ss_pred             CCCCcceEEeecCceEEEEEEEcCCCe----EEEEEEeccCCc-hhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceE
Q 005257          364 KGFSEENVIGVGGNGKVYKGVLEGGGA----EIAVKRISHEND-GGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLM  438 (705)
Q Consensus       364 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~----~vavK~i~~~~~-~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~  438 (705)
                      .+|+..+.||+|+||.||+|.++.++.    .+|+|.+..... ....++.+|+.++++++||||++++++|..  ...+
T Consensus         7 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--~~~~   84 (279)
T cd05057           7 TELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVDHPHVVRLLGICLS--SQVQ   84 (279)
T ss_pred             HHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEec--CceE
Confidence            456778999999999999999876554    689998865543 345678999999999999999999999875  5789


Q ss_pred             EEEeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceec
Q 005257          439 LVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMH  518 (705)
Q Consensus       439 lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~  518 (705)
                      +|+||+++|+|.+++.....  .+++..+..++.|++.||+|||+   .+++||||||+||++++++.+||+|||+++..
T Consensus        85 ~v~e~~~~g~L~~~l~~~~~--~~~~~~~~~~~~qi~~~l~~LH~---~~i~H~di~p~nil~~~~~~~kL~dfg~~~~~  159 (279)
T cd05057          85 LITQLMPLGCLLDYVRNHKD--NIGSQYLLNWCVQIAKGMSYLEE---KRLVHRDLAARNVLVKTPQHVKITDFGLAKLL  159 (279)
T ss_pred             EEEecCCCCcHHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHh---CCEEecccCcceEEEcCCCeEEECCCcccccc
Confidence            99999999999999976433  58999999999999999999998   99999999999999999999999999999876


Q ss_pred             CCCCccee-eeeeccccCCCccccccCCCCccccEEEEehhHHHHhh-CCCCCCCCCccHHHHHHHHHHhCchhHHHHHh
Q 005257          519 GHGQVAST-TRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLS-GRRPIEEGKPNLVEMVWELMVQGKLLDALDAR  596 (705)
Q Consensus       519 ~~~~~~~~-~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~Ellt-G~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~  596 (705)
                      ........ ....++..|+|||.+....++.++|||||||++||+++ |+.||......   .+...+..+..       
T Consensus       160 ~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~---~~~~~~~~~~~-------  229 (279)
T cd05057         160 DVDEKEYHAEGGKVPIKWMALESILHRIYTHKSDVWSYGVTVWELMTFGAKPYEGIPAV---EIPDLLEKGER-------  229 (279)
T ss_pred             cCcccceecCCCcccccccCHHHhhcCCcCchhhHHHHHHHHHHHhcCCCCCCCCCCHH---HHHHHHhCCCC-------
Confidence            53322111 11223568999999988889999999999999999998 99999764321   11122222111       


Q ss_pred             hhcCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHhccc
Q 005257          597 LRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLEGKIE  641 (705)
Q Consensus       597 l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~  641 (705)
                          ...+..+...+.+++..||..+|++||++.++++.|+....
T Consensus       230 ----~~~~~~~~~~~~~~~~~~l~~~p~~Rp~~~~l~~~l~~~~~  270 (279)
T cd05057         230 ----LPQPPICTIDVYMVLVKCWMIDAESRPTFKELINEFSKMAR  270 (279)
T ss_pred             ----CCCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHh
Confidence                11122233567889999999999999999999999987654

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea

>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]

Probab=100.00  E-value=3.1e-38  Score=311.26  Aligned_cols=249  Identities=27%  Similarity=0.384  Sum_probs=209.7

Q ss_pred             CCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCCchhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEEEEeeCC
Q 005257          366 FSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYME  445 (705)
Q Consensus       366 f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~lV~E~~~  445 (705)
                      |.+.++||+|+||.|||+.++.+|..+|||++..+  .+.+++..|+.+|++.+.|++|+++|.+.. ...+++|||||.
T Consensus        35 FDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV~--sDLQEIIKEISIMQQC~S~yVVKYYGSYFK-~sDLWIVMEYCG  111 (502)
T KOG0574|consen   35 FDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPVD--TDLQEIIKEISIMQQCKSKYVVKYYGSYFK-HSDLWIVMEYCG  111 (502)
T ss_pred             HHHHHHhcCCcchHHHHHHHhccCcEEEEEecCcc--chHHHHHHHHHHHHHcCCchhhhhhhhhcc-CCceEeehhhcC
Confidence            66788999999999999999999999999998654  457899999999999999999999998876 568999999999


Q ss_pred             CCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecCCCCcce
Q 005257          446 NGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVAS  525 (705)
Q Consensus       446 ~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~~~~~~~  525 (705)
                      .|+..+.++-++  ++|++.++..+++..++||+|||.   ..-||||||+.||||+-+|.+||+|||.|-.+..... .
T Consensus       112 AGSiSDI~R~R~--K~L~E~EIs~iL~~TLKGL~YLH~---~~KIHRDIKAGNILLNT~G~AKLADFGVAGQLTDTMA-K  185 (502)
T KOG0574|consen  112 AGSISDIMRARR--KPLSEQEISAVLRDTLKGLQYLHD---LKKIHRDIKAGNILLNTDGIAKLADFGVAGQLTDTMA-K  185 (502)
T ss_pred             CCcHHHHHHHhc--CCccHHHHHHHHHHHHhHHHHHHH---HHHHHhhcccccEEEcccchhhhhhccccchhhhhHH-h
Confidence            999999997644  379999999999999999999998   8899999999999999999999999999976654332 2


Q ss_pred             eeeeeccccCCCccccccCCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhHHHHHhhhcCCCCCH
Q 005257          526 TTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRAKGGFDE  605 (705)
Q Consensus       526 ~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~l~~~~~~~~  605 (705)
                      ...++||+.|||||++..-.|..++||||||+...||.-|++||.+..+--      .+      -.+.........-++
T Consensus       186 RNTVIGTPFWMAPEVI~EIGY~~~ADIWSLGITaIEMAEG~PPYsDIHPMR------AI------FMIPT~PPPTF~KPE  253 (502)
T KOG0574|consen  186 RNTVIGTPFWMAPEVIEEIGYDTKADIWSLGITAIEMAEGRPPYSDIHPMR------AI------FMIPTKPPPTFKKPE  253 (502)
T ss_pred             hCccccCcccccHHHHHHhccchhhhHhhhcchhhhhhcCCCCcccccccc------ee------EeccCCCCCCCCChH
Confidence            344799999999999999999999999999999999999999998755410      00      001111111112244


Q ss_pred             HHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 005257          606 DEVERVLHLGLLCAYPDPRARPTMRQVVKV  635 (705)
Q Consensus       606 ~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  635 (705)
                      .....+.++++.|+-+.|++|.|+-+++++
T Consensus       254 ~WS~~F~DFi~~CLiK~PE~R~TA~~L~~H  283 (502)
T KOG0574|consen  254 EWSSEFNDFIRSCLIKKPEERKTALRLCEH  283 (502)
T ss_pred             hhhhHHHHHHHHHhcCCHHHHHHHHHHhhh
Confidence            556789999999999999999999998874

>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=6e-36  Score=312.17  Aligned_cols=249  Identities=25%  Similarity=0.405  Sum_probs=205.4

Q ss_pred             CCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCC-chhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEEEEe
Q 005257          364 KGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHEN-DGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYD  442 (705)
Q Consensus       364 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~-~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~lV~E  442 (705)
                      ++|+..+.||.|++|.||+|.+..+++.||+|.+.... ......+.+|+++++.++|+|++++++.+.. ...+++|+|
T Consensus         1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~~v~e   79 (274)
T cd06609           1 ELFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQCRSPYITKYYGSFLK-GSKLWIIME   79 (274)
T ss_pred             ChhhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeeccccchHHHHHHHHHHHHHHcCCCCeeeeeEEEEE-CCeEEEEEE
Confidence            35777889999999999999999899999999987553 3445678999999999999999999998876 578999999


Q ss_pred             eCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecCCCC
Q 005257          443 YMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQ  522 (705)
Q Consensus       443 ~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~~~~  522 (705)
                      |+++++|.+++...    .+++..+..++.|++.||.|||+   .+++|+||+|+||++++++.++|+|||+++......
T Consensus        80 ~~~~~~L~~~~~~~----~~~~~~~~~~~~ql~~~l~~lh~---~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~  152 (274)
T cd06609          80 YCGGGSCLDLLKPG----KLDETYIAFILREVLLGLEYLHE---EGKIHRDIKAANILLSEEGDVKLADFGVSGQLTSTM  152 (274)
T ss_pred             eeCCCcHHHHHhhc----CCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCHHHEEECCCCCEEEcccccceeecccc
Confidence            99999999998643    68999999999999999999998   999999999999999999999999999998775432


Q ss_pred             cceeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhHHHHHhhhcCCC
Q 005257          523 VASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRAKGG  602 (705)
Q Consensus       523 ~~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~l~~~~~  602 (705)
                      . ......|+..|+|||++.+..++.++|||||||++|||++|+.||....+.  ... ..+..+         ..  ..
T Consensus       153 ~-~~~~~~~~~~y~~PE~~~~~~~~~~sDv~slG~il~~l~tg~~p~~~~~~~--~~~-~~~~~~---------~~--~~  217 (274)
T cd06609         153 S-KRNTFVGTPFWMAPEVIKQSGYDEKADIWSLGITAIELAKGEPPLSDLHPM--RVL-FLIPKN---------NP--PS  217 (274)
T ss_pred             c-ccccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCcccCchH--HHH-HHhhhc---------CC--CC
Confidence            2 223356888999999999888999999999999999999999999754321  111 111111         10  11


Q ss_pred             CCHH-HHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 005257          603 FDED-EVERVLHLGLLCAYPDPRARPTMRQVVKV  635 (705)
Q Consensus       603 ~~~~-~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  635 (705)
                      .... ....+.+++..||..+|++||++++++++
T Consensus       218 ~~~~~~~~~~~~~l~~~l~~~p~~Rpt~~~il~~  251 (274)
T cd06609         218 LEGNKFSKPFKDFVSLCLNKDPKERPSAKELLKH  251 (274)
T ss_pred             CcccccCHHHHHHHHHHhhCChhhCcCHHHHhhC
Confidence            1111 34568889999999999999999999874

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)

>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

Probab=100.00  E-value=1.2e-35  Score=306.34  Aligned_cols=251  Identities=24%  Similarity=0.409  Sum_probs=205.9

Q ss_pred             CCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccC--CchhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEEEEe
Q 005257          365 GFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHE--NDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYD  442 (705)
Q Consensus       365 ~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~--~~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~lV~E  442 (705)
                      +|+..+.||+|+||.+|++....+++.+|+|++...  .....+++.+|+.++++++||||+++++++.. .+..++|+|
T Consensus         1 ~y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~~lv~e   79 (256)
T cd08218           1 KYVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPNIVQYQESFEE-NGNLYIVMD   79 (256)
T ss_pred             CceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhCCCCCeeeeEeeecC-CCeEEEEEe
Confidence            478899999999999999999988999999998654  23345688999999999999999999998765 678999999


Q ss_pred             eCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecCCCC
Q 005257          443 YMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQ  522 (705)
Q Consensus       443 ~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~~~~  522 (705)
                      |+++++|.+++...... .+++.++.+++.|++.||.|||+   .+++|+||+|+||+++.++.++|+|||++.......
T Consensus        80 ~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~l~~~l~~lh~---~~i~h~~l~~~nil~~~~~~~~l~d~~~~~~~~~~~  155 (256)
T cd08218          80 YCEGGDLYKKINAQRGV-LFPEDQILDWFVQICLALKHVHD---RKILHRDIKSQNIFLTKDGTIKLGDFGIARVLNSTV  155 (256)
T ss_pred             cCCCCcHHHHHHhccCC-CCCHHHHHHHHHHHHHHHHHHHh---CCEecCCCCHHHEEEcCCCCEEEeeccceeecCcch
Confidence            99999999998754332 57899999999999999999998   999999999999999999999999999998664432


Q ss_pred             cceeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhHHHHHhhhcCCC
Q 005257          523 VASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRAKGG  602 (705)
Q Consensus       523 ~~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~l~~~~~  602 (705)
                      .. .....|++.|+|||++.+...+.++|||||||+++||++|+.||.....  .+.+... ..+..           ..
T Consensus       156 ~~-~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~--~~~~~~~-~~~~~-----------~~  220 (256)
T cd08218         156 EL-ARTCIGTPYYLSPEICENRPYNNKSDIWALGCVLYEMCTLKHAFEAGNM--KNLVLKI-IRGSY-----------PP  220 (256)
T ss_pred             hh-hhhccCCccccCHHHhCCCCCCCccchhHHHHHHHHHHcCCCCccCCCH--HHHHHHH-hcCCC-----------CC
Confidence            21 1234678899999999888899999999999999999999999976432  1111111 11111           11


Q ss_pred             CCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 005257          603 FDEDEVERVLHLGLLCAYPDPRARPTMRQVVKV  635 (705)
Q Consensus       603 ~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  635 (705)
                      .+......+.+++.+||+.+|++||++.+++++
T Consensus       221 ~~~~~~~~~~~li~~~l~~~p~~Rp~~~~vl~~  253 (256)
T cd08218         221 VSSHYSYDLRNLVSQLFKRNPRDRPSVNSILEK  253 (256)
T ss_pred             CcccCCHHHHHHHHHHhhCChhhCcCHHHHhhC
Confidence            223345678899999999999999999999874

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti

>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

Probab=100.00  E-value=1.5e-35  Score=308.03  Aligned_cols=251  Identities=24%  Similarity=0.428  Sum_probs=198.0

Q ss_pred             CCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCC-----chhHHHHHHHHHHhccCCCCCcceeeeeeeec-cCce
Q 005257          364 KGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHEN-----DGGTRAFLAEISSLGRLKHKSLVGLRGWCKRE-KGSL  437 (705)
Q Consensus       364 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~-----~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~-~~~~  437 (705)
                      .+|...+.||+|+||.||+|....++..||+|++....     ....+.+.+|+.++++++||||+++++++... ...+
T Consensus         2 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~   81 (266)
T cd06651           2 INWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDRAEKTL   81 (266)
T ss_pred             CCccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcCCCCEE
Confidence            46888999999999999999999889999999886432     22345688999999999999999999987643 3567


Q ss_pred             EEEEeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeecccee
Q 005257          438 MLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARM  517 (705)
Q Consensus       438 ~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~  517 (705)
                      ++++||+++++|.+++....   .+++..+..++.|++.||.|||+   .+++||||||+||+++.++.+||+|||+++.
T Consensus        82 ~l~~e~~~~~~L~~~l~~~~---~l~~~~~~~~~~qi~~~l~~LH~---~~i~H~~l~p~nil~~~~~~~~l~dfg~~~~  155 (266)
T cd06651          82 TIFMEYMPGGSVKDQLKAYG---ALTESVTRKYTRQILEGMSYLHS---NMIVHRDIKGANILRDSAGNVKLGDFGASKR  155 (266)
T ss_pred             EEEEeCCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHh---CCeeeCCCCHHHEEECCCCCEEEccCCCccc
Confidence            89999999999999996543   58899999999999999999998   9999999999999999999999999999976


Q ss_pred             cCCCCc--ceeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhHHHHH
Q 005257          518 HGHGQV--ASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDA  595 (705)
Q Consensus       518 ~~~~~~--~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~  595 (705)
                      ......  .......++..|+|||++.+..++.++|||||||++|||++|+.||.....  ...+........       
T Consensus       156 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~el~~g~~pf~~~~~--~~~~~~~~~~~~-------  226 (266)
T cd06651         156 LQTICMSGTGIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEKPPWAEYEA--MAAIFKIATQPT-------  226 (266)
T ss_pred             cccccccCCccccCCccccccCHHHhCCCCCCchhhhHHHHHHHHHHHHCCCCccccch--HHHHHHHhcCCC-------
Confidence            532111  111224578999999999888899999999999999999999999975432  111111111000       


Q ss_pred             hhhcCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHH
Q 005257          596 RLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVK  634 (705)
Q Consensus       596 ~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~  634 (705)
                          ....+....+.+..++ .||..+|++||+++|+++
T Consensus       227 ----~~~~~~~~~~~~~~li-~~~~~~p~~Rp~~~eil~  260 (266)
T cd06651         227 ----NPQLPSHISEHARDFL-GCIFVEARHRPSAEELLR  260 (266)
T ss_pred             ----CCCCchhcCHHHHHHH-HHhcCChhhCcCHHHHhc
Confidence                0222223334455555 688899999999999976

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development

>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

Probab=100.00  E-value=6.5e-36  Score=314.89  Aligned_cols=265  Identities=25%  Similarity=0.349  Sum_probs=208.1

Q ss_pred             cCHHHHHHHhCCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCCchhHHHHHHHHHHhccC-CCCCcceeeeeeee
Q 005257          354 ITYQEIEAATKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRL-KHKSLVGLRGWCKR  432 (705)
Q Consensus       354 ~~~~el~~at~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~~~~~~~~~Ei~~l~~l-~Hpniv~l~g~~~~  432 (705)
                      +...++..++++|...+.||+|+||.||++....+++.+|+|.+.... .....+.+|+.++.++ +|||++++++++..
T Consensus        12 ~~~~~~~~~~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~-~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~   90 (291)
T cd06639          12 LGLESLGDPTDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPIS-DVDEEIEAEYNILQSLPNHPNVVKFYGMFYK   90 (291)
T ss_pred             hhcccCCCCCCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEecccc-cHHHHHHHHHHHHHHhcCCCCeEEEEEEEEe
Confidence            445666778899999999999999999999999889999999986432 2345678899999999 89999999998865


Q ss_pred             cc----CceEEEEeeCCCCChhHHHHhcC-CCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCe
Q 005257          433 EK----GSLMLVYDYMENGSLDKWIFQCD-GSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNG  507 (705)
Q Consensus       433 ~~----~~~~lV~E~~~~gsL~~~L~~~~-~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~  507 (705)
                      .+    +..++||||+++++|.+++.... ....+++..+..++.|++.||.|||+   .+++||||||+||+++.++.+
T Consensus        91 ~~~~~~~~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~---~~ivH~dlkp~nili~~~~~~  167 (291)
T cd06639          91 ADKLVGGQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHN---NRIIHRDVKGNNILLTTEGGV  167 (291)
T ss_pred             ccccCCCeeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHh---CCeeccCCCHHHEEEcCCCCE
Confidence            32    35899999999999999886421 22368999999999999999999998   999999999999999999999


Q ss_pred             eeeeeccceecCCCCcceeeeeeccccCCCccccccC-----CCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHH
Q 005257          508 RLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSG-----RASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWE  582 (705)
Q Consensus       508 kL~DFGla~~~~~~~~~~~~~~~gt~~y~APE~~~~~-----~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~  582 (705)
                      ||+|||+++........ .....|+..|+|||.+...     .++.++|||||||++|||++|+.||......  ..+..
T Consensus       168 kl~dfg~~~~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g~~p~~~~~~~--~~~~~  244 (291)
T cd06639         168 KLVDFGVSAQLTSTRLR-RNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDMHPV--KTLFK  244 (291)
T ss_pred             EEeecccchhccccccc-ccCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHhhCCCCCCCCcHH--HHHHH
Confidence            99999998765432221 1224688999999998643     3689999999999999999999999764321  11111


Q ss_pred             HHHhCchhHHHHHhhhcCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 005257          583 LMVQGKLLDALDARLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKV  635 (705)
Q Consensus       583 ~~~~~~~~~~id~~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  635 (705)
                       +..+...     .+    ..+......+.+++.+||+.+|++||++.+++++
T Consensus       245 -~~~~~~~-----~~----~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~  287 (291)
T cd06639         245 -IPRNPPP-----TL----LHPEKWCRSFNHFISQCLIKDFEARPSVTHLLEH  287 (291)
T ss_pred             -HhcCCCC-----CC----CcccccCHHHHHHHHHHhhcChhhCcCHHHHhcC
Confidence             1111000     00    1122334568899999999999999999999874

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre

>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

Probab=100.00  E-value=1.1e-35  Score=306.31  Aligned_cols=249  Identities=24%  Similarity=0.412  Sum_probs=203.2

Q ss_pred             CCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCC-----chhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEE
Q 005257          365 GFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHEN-----DGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLML  439 (705)
Q Consensus       365 ~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~-----~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~l  439 (705)
                      +|+..+.||+|++|.||+|....++..|++|.+....     .+..+.+.+|+.++++++|+||+++++++.. ...+++
T Consensus         1 ~~~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-~~~~~l   79 (258)
T cd06632           1 RWRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTERE-EDNLYI   79 (258)
T ss_pred             CccccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEec-CCeEEE
Confidence            4677889999999999999998888999999886543     2345678999999999999999999998876 678899


Q ss_pred             EEeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecC
Q 005257          440 VYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHG  519 (705)
Q Consensus       440 V~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~  519 (705)
                      ++||+++++|.+++.+..   .+++..+..++.|++.||.|||+   .+++|+||+|+||+++.++.+||+|||++....
T Consensus        80 v~e~~~~~~L~~~~~~~~---~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dl~~~ni~~~~~~~~kl~d~~~~~~~~  153 (258)
T cd06632          80 FLELVPGGSLAKLLKKYG---SFPEPVIRLYTRQILLGLEYLHD---RNTVHRDIKGANILVDTNGVVKLADFGMAKQVV  153 (258)
T ss_pred             EEEecCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEECCCCCEEEccCccceecc
Confidence            999999999999997543   58899999999999999999998   999999999999999999999999999988654


Q ss_pred             CCCcceeeeeeccccCCCccccccCC-CCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhHHHHHhhh
Q 005257          520 HGQVASTTRVVGTVGYLAPEVFSSGR-ASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDARLR  598 (705)
Q Consensus       520 ~~~~~~~~~~~gt~~y~APE~~~~~~-~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~l~  598 (705)
                      ...  ......|+..|+|||.+.... ++.++|+|||||++|||++|+.||.....  .+..+........         
T Consensus       154 ~~~--~~~~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~~--~~~~~~~~~~~~~---------  220 (258)
T cd06632         154 EFS--FAKSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLEG--VAAVFKIGRSKEL---------  220 (258)
T ss_pred             ccc--cccccCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcccCcH--HHHHHHHHhcccC---------
Confidence            433  223356889999999987766 89999999999999999999999976442  1121111110110         


Q ss_pred             cCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 005257          599 AKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKV  635 (705)
Q Consensus       599 ~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  635 (705)
                        ...+......+.+++.+||+.+|++||++.++++.
T Consensus       221 --~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~  255 (258)
T cd06632         221 --PPIPDHLSDEAKDFILKCLQRDPSLRPTAAELLEH  255 (258)
T ss_pred             --CCcCCCcCHHHHHHHHHHhhcCcccCcCHHHHhcC
Confidence              12222334667889999999999999999998863

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops

>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=1.1e-36  Score=322.95  Aligned_cols=246  Identities=26%  Similarity=0.376  Sum_probs=202.9

Q ss_pred             CCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCCc---hhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEEEE
Q 005257          365 GFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHEND---GGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVY  441 (705)
Q Consensus       365 ~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~---~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~lV~  441 (705)
                      .|+..+.||.|+||.||.+++..+.+.||||++....+   +..++++.|+..|.+++|||++.+.|++.. +...||||
T Consensus        27 lf~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkgCyLr-e~TaWLVM  105 (948)
T KOG0577|consen   27 LFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYLR-EHTAWLVM  105 (948)
T ss_pred             HHHHHHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccceeec-cchHHHHH
Confidence            36667789999999999999999999999999976543   334678999999999999999999997776 66789999


Q ss_pred             eeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecCCC
Q 005257          442 DYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHG  521 (705)
Q Consensus       442 E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~~~  521 (705)
                      |||- ||-.++|.-.+.  ++.+.++..|+.+.+.||+|||+   .+.||||||+.||||.+.|.+||+|||.|.+..+.
T Consensus       106 EYCl-GSAsDlleVhkK--plqEvEIAAi~~gaL~gLaYLHS---~~~IHRDiKAGNILLse~g~VKLaDFGSAsi~~PA  179 (948)
T KOG0577|consen  106 EYCL-GSASDLLEVHKK--PLQEVEIAAITHGALQGLAYLHS---HNRIHRDIKAGNILLSEPGLVKLADFGSASIMAPA  179 (948)
T ss_pred             HHHh-ccHHHHHHHHhc--cchHHHHHHHHHHHHHHHHHHHH---hhHHhhhccccceEecCCCeeeeccccchhhcCch
Confidence            9995 577777754433  68999999999999999999999   99999999999999999999999999999876543


Q ss_pred             CcceeeeeeccccCCCccccc---cCCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhHHHHHhhh
Q 005257          522 QVASTTRVVGTVGYLAPEVFS---SGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDARLR  598 (705)
Q Consensus       522 ~~~~~~~~~gt~~y~APE~~~---~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~l~  598 (705)
                           ..++|||.|||||++.   .+.|+-++|||||||.+.||.-.++|+...+.  ...++....+ +.     +.+ 
T Consensus       180 -----nsFvGTPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFnMNA--MSALYHIAQN-es-----PtL-  245 (948)
T KOG0577|consen  180 -----NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNA--MSALYHIAQN-ES-----PTL-  245 (948)
T ss_pred             -----hcccCCccccchhHheeccccccCCccceeeccchhhhhhhcCCCccCchH--HHHHHHHHhc-CC-----CCC-
Confidence                 3479999999999985   47899999999999999999999999876432  1111111111 10     111 


Q ss_pred             cCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 005257          599 AKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKV  635 (705)
Q Consensus       599 ~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  635 (705)
                          ...+....+..++..|+++-|++|||..+++++
T Consensus       246 ----qs~eWS~~F~~Fvd~CLqKipqeRptse~ll~H  278 (948)
T KOG0577|consen  246 ----QSNEWSDYFRNFVDSCLQKIPQERPTSEELLKH  278 (948)
T ss_pred             ----CCchhHHHHHHHHHHHHhhCcccCCcHHHHhhc
Confidence                134566788999999999999999999999874

>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

Probab=100.00  E-value=5.9e-36  Score=308.65  Aligned_cols=251  Identities=30%  Similarity=0.478  Sum_probs=200.7

Q ss_pred             CCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCCchhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEEEEee
Q 005257          364 KGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDY  443 (705)
Q Consensus       364 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~lV~E~  443 (705)
                      .+|+..+.||+|+||.||++.+.. +..+|+|.+.... ....++.+|++++++++|||++++++++.. ....++||||
T Consensus         4 ~~~~~~~~ig~g~~g~v~~~~~~~-~~~~~~k~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~~~v~e~   80 (256)
T cd05112           4 SELTLVQEIGSGQFGLVWLGYWLE-KRKVAIKTIREGA-MSEEDFIEEAQVMMKLSHPKLVQLYGVCTE-RSPICLVFEF   80 (256)
T ss_pred             hHeEEEeeecCcccceEEEEEEeC-CCeEEEEECCCCC-CCHHHHHHHHHHHHhCCCCCeeeEEEEEcc-CCceEEEEEc
Confidence            356778899999999999998864 6689999886432 234678999999999999999999998775 5678999999


Q ss_pred             CCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecCCCCc
Q 005257          444 MENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQV  523 (705)
Q Consensus       444 ~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~~~~~  523 (705)
                      +++++|.+++.....  .+++..+..++.|++.||+|||+   .+++|+||||+||+++.++.+||+|||+++.......
T Consensus        81 ~~~~~L~~~~~~~~~--~~~~~~~~~~~~~l~~~l~~lH~---~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~  155 (256)
T cd05112          81 MEHGCLSDYLRAQRG--KFSQETLLGMCLDVCEGMAYLES---SNVIHRDLAARNCLVGENQVVKVSDFGMTRFVLDDQY  155 (256)
T ss_pred             CCCCcHHHHHHhCcc--CCCHHHHHHHHHHHHHHHHHHHH---CCccccccccceEEEcCCCeEEECCCcceeecccCcc
Confidence            999999999875433  58899999999999999999998   8999999999999999999999999999986543322


Q ss_pred             ceeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhh-CCCCCCCCCccHHHHHHHHHHhCchhHHHHHhhhcCCC
Q 005257          524 ASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLS-GRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRAKGG  602 (705)
Q Consensus       524 ~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~Ellt-G~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~l~~~~~  602 (705)
                      .......++.+|+|||.+.++.++.++||||||+++|||++ |+.||......  . ..+....+         .+  ..
T Consensus       156 ~~~~~~~~~~~~~aPe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~--~-~~~~~~~~---------~~--~~  221 (256)
T cd05112         156 TSSTGTKFPVKWSSPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKTPYENRSNS--E-VVETINAG---------FR--LY  221 (256)
T ss_pred             cccCCCccchhhcCHhHhccCCcChHHHHHHHHHHHHHHHcCCCCCCCcCCHH--H-HHHHHhCC---------CC--CC
Confidence            21222234678999999988889999999999999999998 99998754321  1 11111111         00  00


Q ss_pred             CCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Q 005257          603 FDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVL  636 (705)
Q Consensus       603 ~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L  636 (705)
                      .+......+.+++.+||+.+|++||++.++++.|
T Consensus       222 ~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~~l~~l  255 (256)
T cd05112         222 KPRLASQSVYELMQHCWKERPEDRPSFSLLLHQL  255 (256)
T ss_pred             CCCCCCHHHHHHHHHHcccChhhCCCHHHHHHhh
Confidence            1112346789999999999999999999999886

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ

>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

Probab=100.00  E-value=1.3e-35  Score=320.45  Aligned_cols=260  Identities=22%  Similarity=0.297  Sum_probs=198.3

Q ss_pred             HhCCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCC--chhHHHHHHHHHHhccCCCCCcceeeeeeeec-----c
Q 005257          362 ATKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHEN--DGGTRAFLAEISSLGRLKHKSLVGLRGWCKRE-----K  434 (705)
Q Consensus       362 at~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~--~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~-----~  434 (705)
                      ..++|...+.||+|+||.||+|.+..+++.||||++....  ....+.+.+|++++++++||||+++++++...     .
T Consensus        13 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~   92 (343)
T cd07878          13 VPERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMKHENVIGLLDVFTPATSIENF   92 (343)
T ss_pred             hhhhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhcCCCchhhhhhhhccccccccc
Confidence            4567888999999999999999999889999999986542  22345678999999999999999999877532     2


Q ss_pred             CceEEEEeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeecc
Q 005257          435 GSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGL  514 (705)
Q Consensus       435 ~~~~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGl  514 (705)
                      ...++++|++ +++|.+++..    ..+++.++..++.|++.||.|||+   ++|+||||||+|||++.++.+||+|||+
T Consensus        93 ~~~~~~~~~~-~~~l~~~~~~----~~l~~~~~~~i~~qi~~aL~~LH~---~~ivHrdikp~Nil~~~~~~~kl~Dfg~  164 (343)
T cd07878          93 NEVYLVTNLM-GADLNNIVKC----QKLSDEHVQFLIYQLLRGLKYIHS---AGIIHRDLKPSNVAVNEDCELRILDFGL  164 (343)
T ss_pred             CcEEEEeecC-CCCHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHH---CCeecccCChhhEEECCCCCEEEcCCcc
Confidence            3578999998 7799887742    258999999999999999999998   9999999999999999999999999999


Q ss_pred             ceecCCCCcceeeeeeccccCCCcccccc-CCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHH-hCc-hhH
Q 005257          515 ARMHGHGQVASTTRVVGTVGYLAPEVFSS-GRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMV-QGK-LLD  591 (705)
Q Consensus       515 a~~~~~~~~~~~~~~~gt~~y~APE~~~~-~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~-~~~-~~~  591 (705)
                      ++.....    .....||+.|+|||++.+ ..++.++|||||||++|||++|+.||.....  .+.+..... .+. ..+
T Consensus       165 ~~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~--~~~~~~~~~~~~~~~~~  238 (343)
T cd07878         165 ARQADDE----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPGNDY--IDQLKRIMEVVGTPSPE  238 (343)
T ss_pred             ceecCCC----cCCccccccccCchHhcCCccCCchhhhHhHHHHHHHHHHCCCCCCCCCH--HHHHHHHHHHhCCCCHH
Confidence            9865432    223578999999999876 5689999999999999999999999975432  111111110 010 000


Q ss_pred             HHH--------HhhhcCCCCCH--------HHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 005257          592 ALD--------ARLRAKGGFDE--------DEVERVLHLGLLCAYPDPRARPTMRQVVKV  635 (705)
Q Consensus       592 ~id--------~~l~~~~~~~~--------~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  635 (705)
                      ...        ..+......+.        .....+.+++..|++.||++|||+.|++++
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dp~~R~s~~ell~h  298 (343)
T cd07878         239 VLKKISSEHARKYIQSLPHMPQQDLKKIFRGANPLAIDLLEKMLVLDSDKRISASEALAH  298 (343)
T ss_pred             HHHhcchhhHHHHhhccccccchhHHHhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence            000        00000000111        012346789999999999999999999874

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is

>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

Probab=100.00  E-value=9.8e-36  Score=310.55  Aligned_cols=257  Identities=24%  Similarity=0.405  Sum_probs=204.8

Q ss_pred             CCCCcceEEeecCceEEEEEEEcC-----CCeEEEEEEeccCCch-hHHHHHHHHHHhccCCCCCcceeeeeeeeccCce
Q 005257          364 KGFSEENVIGVGGNGKVYKGVLEG-----GGAEIAVKRISHENDG-GTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSL  437 (705)
Q Consensus       364 ~~f~~~~~LG~G~fg~Vy~~~~~~-----~~~~vavK~i~~~~~~-~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~  437 (705)
                      ++|+..+.||+|+||.||+|+.+.     ..+.|++|.+...... ..+.+.+|++++++++||||+++++++.. ....
T Consensus         5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-~~~~   83 (275)
T cd05046           5 SNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKLSHKNVVRLLGLCRE-AEPH   83 (275)
T ss_pred             HhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCccchHHHHHHHHHHHHHHhcCCcceeeeEEEECC-CCcc
Confidence            568889999999999999999753     3467999988654443 46789999999999999999999998876 5678


Q ss_pred             EEEEeeCCCCChhHHHHhcCCC------CcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeee
Q 005257          438 MLVYDYMENGSLDKWIFQCDGS------MMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGD  511 (705)
Q Consensus       438 ~lV~E~~~~gsL~~~L~~~~~~------~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~D  511 (705)
                      ++||||+++|+|.+++......      ..+++.++..++.|++.||.|||+   .+++||||||+||+++.++.++|+|
T Consensus        84 ~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~---~~i~H~dlkp~Nili~~~~~~~l~~  160 (275)
T cd05046          84 YMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSN---ARFVHRDLAARNCLVSSQREVKVSL  160 (275)
T ss_pred             eEEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhh---cCcccCcCccceEEEeCCCcEEEcc
Confidence            9999999999999999765422      158999999999999999999998   8999999999999999999999999


Q ss_pred             eccceecCCCCcceeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhh-CCCCCCCCCccHHHHHHHHHHhCchh
Q 005257          512 FGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLS-GRRPIEEGKPNLVEMVWELMVQGKLL  590 (705)
Q Consensus       512 FGla~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~Ellt-G~~Pf~~~~~~~~~~v~~~~~~~~~~  590 (705)
                      ||+++..............++..|+|||.+.+...+.++||||||+++|||++ |..||......   .+......+...
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~~~~~p~~~~~~~---~~~~~~~~~~~~  237 (275)
T cd05046         161 LSLSKDVYNSEYYKLRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQGELPFYGLSDE---EVLNRLQAGKLE  237 (275)
T ss_pred             cccccccCcccccccCCceeEEeecChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCccccchH---HHHHHHHcCCcC
Confidence            99987543322222233456788999999988888999999999999999998 78888643221   111111111110


Q ss_pred             HHHHHhhhcCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHH
Q 005257          591 DALDARLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLE  637 (705)
Q Consensus       591 ~~id~~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  637 (705)
                                ..........+.+++.+||+.+|++||++.++++.|.
T Consensus       238 ----------~~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~~l~~l~  274 (275)
T cd05046         238 ----------LPVPEGCPSRLYKLMTRCWAVNPKDRPSFSELVSALG  274 (275)
T ss_pred             ----------CCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhc
Confidence                      1112234467899999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s

>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

Probab=100.00  E-value=6.8e-36  Score=313.11  Aligned_cols=263  Identities=23%  Similarity=0.365  Sum_probs=207.9

Q ss_pred             ccCHHHHHHHhCCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCCchhHHHHHHHHHHhccC-CCCCcceeeeeee
Q 005257          353 RITYQEIEAATKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRL-KHKSLVGLRGWCK  431 (705)
Q Consensus       353 ~~~~~el~~at~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~~~~~~~~~Ei~~l~~l-~Hpniv~l~g~~~  431 (705)
                      +.++.++..+...|+..+.||+|+||.||+|.+..+++.+|+|.+.... ....++..|+.++.++ +||||+++++++.
T Consensus         5 ~~~~~~~~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~-~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~   83 (282)
T cd06636           5 DIDLSALRDPAGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTE-DEEEEIKLEINMLKKYSHHRNIATYYGAFI   83 (282)
T ss_pred             hhhhhhhcChhhhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecCh-HHHHHHHHHHHHHHHhcCCCcEEEEeeehh
Confidence            3466677778889999999999999999999999889999999886543 3446788999999998 6999999999875


Q ss_pred             e-----ccCceEEEEeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCC
Q 005257          432 R-----EKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMN  506 (705)
Q Consensus       432 ~-----~~~~~~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~  506 (705)
                      .     .....+++|||+++|+|.+++...... .+++..+..++.|++.||.|||+   .+++|+||||+||++++++.
T Consensus        84 ~~~~~~~~~~~~iv~e~~~~~~L~~~~~~~~~~-~~~~~~~~~~~~qi~~al~~LH~---~~ivH~dl~~~nili~~~~~  159 (282)
T cd06636          84 KKSPPGHDDQLWLVMEFCGAGSVTDLVKNTKGN-ALKEDWIAYICREILRGLAHLHA---HKVIHRDIKGQNVLLTENAE  159 (282)
T ss_pred             cccccCCCCEEEEEEEeCCCCcHHHHHHHccCC-CCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEECCCCC
Confidence            3     245689999999999999999764432 58888999999999999999998   99999999999999999999


Q ss_pred             eeeeeeccceecCCCCcceeeeeeccccCCCccccc-----cCCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHH
Q 005257          507 GRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFS-----SGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVW  581 (705)
Q Consensus       507 ~kL~DFGla~~~~~~~~~~~~~~~gt~~y~APE~~~-----~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~  581 (705)
                      ++|+|||++........ ......|++.|+|||.+.     ...++.++|||||||++|||++|+.||....+.  ....
T Consensus       160 ~~l~dfg~~~~~~~~~~-~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~~p~~~~~~~--~~~~  236 (282)
T cd06636         160 VKLVDFGVSAQLDRTVG-RRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDMHPM--RALF  236 (282)
T ss_pred             EEEeeCcchhhhhcccc-CCCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhCCCCccccCHH--hhhh
Confidence            99999999876532221 122356899999999985     346788999999999999999999999654321  1110


Q ss_pred             HHHHhCchhHHHHHhhhcCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHH
Q 005257          582 ELMVQGKLLDALDARLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVK  634 (705)
Q Consensus       582 ~~~~~~~~~~~id~~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~  634 (705)
                      .          +..... ...........+.+++..||+.||.+||++.|+++
T Consensus       237 ~----------~~~~~~-~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~ell~  278 (282)
T cd06636         237 L----------IPRNPP-PKLKSKKWSKKFIDFIEGCLVKNYLSRPSTEQLLK  278 (282)
T ss_pred             h----------HhhCCC-CCCcccccCHHHHHHHHHHhCCChhhCcCHHHHhc
Confidence            0          000000 01111223457899999999999999999999875

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea

>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

Probab=100.00  E-value=1.5e-35  Score=306.06  Aligned_cols=256  Identities=25%  Similarity=0.385  Sum_probs=207.6

Q ss_pred             CCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccC--CchhHHHHHHHHHHhccCCCCCcceeeeeeee-ccCceEEEE
Q 005257          365 GFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHE--NDGGTRAFLAEISSLGRLKHKSLVGLRGWCKR-EKGSLMLVY  441 (705)
Q Consensus       365 ~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~--~~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~-~~~~~~lV~  441 (705)
                      +|+..+.||.|+||.||++....++..+|+|++...  .....+.+.+|++++++++||||+++++++.. .+...+++|
T Consensus         1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~   80 (265)
T cd08217           1 DYEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIVRYYDRIIDRSNQTLYIVM   80 (265)
T ss_pred             CceeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccCCHHHHHHHHHHHHHHHhcCCCccceeeeeeecCCCCEEEEEe
Confidence            477789999999999999999988999999998654  33445678899999999999999999997754 245679999


Q ss_pred             eeCCCCChhHHHHhcC-CCCcccHHHHHHHHHHHHHHHHHHhcCC--CCCeeecCCCCCCeEEccCCCeeeeeeccceec
Q 005257          442 DYMENGSLDKWIFQCD-GSMMLSCEERIRVLKDVAAGVLYLHEGW--EKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMH  518 (705)
Q Consensus       442 E~~~~gsL~~~L~~~~-~~~~l~~~~~~~i~~qia~gL~yLH~~~--~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~  518 (705)
                      ||+++++|.+++.... ....+++..++.++.|++.||.|||..+  ..+++|+||||+||+++.++.+||+|||++...
T Consensus        81 e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~i~h~dl~p~nili~~~~~~kl~d~g~~~~~  160 (265)
T cd08217          81 EYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGNTVLHRDLKPANIFLDANNNVKLGDFGLAKIL  160 (265)
T ss_pred             hhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccCcceecCCCHHHEEEecCCCEEEecccccccc
Confidence            9999999999997632 2347899999999999999999999322  389999999999999999999999999999876


Q ss_pred             CCCCcceeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhHHHHHhhh
Q 005257          519 GHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDARLR  598 (705)
Q Consensus       519 ~~~~~~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~l~  598 (705)
                      ...... .....|++.|+|||.+.+..++.++||||||+++|+|++|+.||.....   ....+.+..+..         
T Consensus       161 ~~~~~~-~~~~~~~~~~~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~---~~~~~~~~~~~~---------  227 (265)
T cd08217         161 GHDSSF-AKTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALSPPFTARNQ---LQLASKIKEGKF---------  227 (265)
T ss_pred             cCCccc-ccccccCCCccChhhhcCCCCCchhHHHHHHHHHHHHHHCCCcccCcCH---HHHHHHHhcCCC---------
Confidence            544321 2234689999999999888899999999999999999999999976542   111122222211         


Q ss_pred             cCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 005257          599 AKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKV  635 (705)
Q Consensus       599 ~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  635 (705)
                        ...+......+.+++.+|++.+|++||++.+|+++
T Consensus       228 --~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~il~~  262 (265)
T cd08217         228 --RRIPYRYSSELNEVIKSMLNVDPDKRPSTEELLQL  262 (265)
T ss_pred             --CCCccccCHHHHHHHHHHccCCcccCCCHHHHhhC
Confidence              12333455678999999999999999999999874

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi

>PTZ00266 NIMA-related protein kinase; Provisional

Probab=100.00  E-value=4.3e-36  Score=350.16  Aligned_cols=261  Identities=21%  Similarity=0.331  Sum_probs=204.2

Q ss_pred             HHHHHhCCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccC--CchhHHHHHHHHHHhccCCCCCcceeeeeeeec-c
Q 005257          358 EIEAATKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHE--NDGGTRAFLAEISSLGRLKHKSLVGLRGWCKRE-K  434 (705)
Q Consensus       358 el~~at~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~--~~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~-~  434 (705)
                      +.....++|.+.+.||+|+||+||++.+..++..+|+|.+...  .......+..|+.++..|+||||+++++++... .
T Consensus         7 ~ge~~l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de~~   86 (1021)
T PTZ00266          7 DGESRLNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMRELKHKNIVRYIDRFLNKAN   86 (1021)
T ss_pred             CCccccCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEecCC
Confidence            3344567899999999999999999999999999999998654  233456789999999999999999999987543 3


Q ss_pred             CceEEEEeeCCCCChhHHHHhcC-CCCcccHHHHHHHHHHHHHHHHHHhcCC----CCCeeecCCCCCCeEEcc------
Q 005257          435 GSLMLVYDYMENGSLDKWIFQCD-GSMMLSCEERIRVLKDVAAGVLYLHEGW----EKKVLHRDIKSSNVLLDK------  503 (705)
Q Consensus       435 ~~~~lV~E~~~~gsL~~~L~~~~-~~~~l~~~~~~~i~~qia~gL~yLH~~~----~~~iiHrDLkp~NILld~------  503 (705)
                      ..++|||||+++|+|.++|.... ....+++..++.|+.||+.||.|||+..    ..+||||||||+||||+.      
T Consensus        87 ~~lyIVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~lg  166 (1021)
T PTZ00266         87 QKLYILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHIG  166 (1021)
T ss_pred             CEEEEEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCccccc
Confidence            56899999999999999997532 2236999999999999999999999732    145999999999999964      


Q ss_pred             -----------CCCeeeeeeccceecCCCCcceeeeeeccccCCCcccccc--CCCCccccEEEEehhHHHHhhCCCCCC
Q 005257          504 -----------EMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSS--GRASTQTDVFGFGILILEVLSGRRPIE  570 (705)
Q Consensus       504 -----------~~~~kL~DFGla~~~~~~~~~~~~~~~gt~~y~APE~~~~--~~~s~ksDVwS~Gvvl~ElltG~~Pf~  570 (705)
                                 ...+||+|||++........  .....||+.|+|||++.+  ..++.++|||||||+||||++|+.||.
T Consensus       167 ~i~~~~~n~ng~~iVKLsDFGlAr~l~~~s~--~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYELLTGk~PF~  244 (1021)
T PTZ00266        167 KITAQANNLNGRPIAKIGDFGLSKNIGIESM--AHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCSGKTPFH  244 (1021)
T ss_pred             cccccccccCCCCceEEccCCcccccccccc--ccccCCCccccCHHHHhccCCCCCchhHHHHHHHHHHHHHHCCCCCC
Confidence                       23489999999986643322  233578999999999854  458899999999999999999999997


Q ss_pred             CCCccHHHHHHHHHHhCchhHHHHHhhhcCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHH
Q 005257          571 EGKPNLVEMVWELMVQGKLLDALDARLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVK  634 (705)
Q Consensus       571 ~~~~~~~~~v~~~~~~~~~~~~id~~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~  634 (705)
                      .... . ..+...+..+.       .+     ........+.+|+..||+.+|.+||++.|+++
T Consensus       245 ~~~~-~-~qli~~lk~~p-------~l-----pi~~~S~eL~dLI~~~L~~dPeeRPSa~QlL~  294 (1021)
T PTZ00266        245 KANN-F-SQLISELKRGP-------DL-----PIKGKSKELNILIKNLLNLSAKERPSALQCLG  294 (1021)
T ss_pred             cCCc-H-HHHHHHHhcCC-------CC-----CcCCCCHHHHHHHHHHhcCChhHCcCHHHHhc
Confidence            5432 1 11111111111       00     01122456889999999999999999999984

>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

Probab=100.00  E-value=1.4e-35  Score=310.82  Aligned_cols=263  Identities=24%  Similarity=0.302  Sum_probs=201.2

Q ss_pred             CCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCC--chhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEEEE
Q 005257          364 KGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHEN--DGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVY  441 (705)
Q Consensus       364 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~--~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~lV~  441 (705)
                      ++|+..+.||+|++|.||+|.++.+++.||+|++....  ....+.+.+|++++++++|||++++++.+.. ....++||
T Consensus         1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-~~~~~~v~   79 (286)
T cd07847           1 EKYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNLVNLIEVFRR-KRKLHLVF   79 (286)
T ss_pred             CceeeeeeecccCCeEEEEEEECCCCcEEEEEEEeecccCccccHHHHHHHHHHHhCCCCCEeeeeeEEee-CCEEEEEE
Confidence            46788899999999999999999889999999886542  2234568899999999999999999998876 67889999


Q ss_pred             eeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecCCC
Q 005257          442 DYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHG  521 (705)
Q Consensus       442 E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~~~  521 (705)
                      ||+++++|..++....   .+++.++..++.|++.||.|||+   ++++||||||+||+++.++.+||+|||++......
T Consensus        80 e~~~~~~l~~~~~~~~---~~~~~~~~~~~~ql~~~l~~LH~---~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~  153 (286)
T cd07847          80 EYCDHTVLNELEKNPR---GVPEHLIKKIIWQTLQAVNFCHK---HNCIHRDVKPENILITKQGQIKLCDFGFARILTGP  153 (286)
T ss_pred             eccCccHHHHHHhCCC---CCCHHHHHHHHHHHHHHHHHHHH---CCceecCCChhhEEEcCCCcEEECccccceecCCC
Confidence            9999988888765322   58999999999999999999998   99999999999999999999999999999876543


Q ss_pred             CcceeeeeeccccCCCcccccc-CCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhHHH----HH-
Q 005257          522 QVASTTRVVGTVGYLAPEVFSS-GRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDAL----DA-  595 (705)
Q Consensus       522 ~~~~~~~~~gt~~y~APE~~~~-~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~~i----d~-  595 (705)
                      .. ......++..|+|||.+.+ ..++.++|||||||++|||++|+.||................ +.....-    +. 
T Consensus       154 ~~-~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~  231 (286)
T cd07847         154 GD-DYTDYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGKSDVDQLYLIRKTL-GDLIPRHQQIFSTN  231 (286)
T ss_pred             cc-cccCcccccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHh-CCCChHHhhhcccc
Confidence            32 1223457889999999876 457899999999999999999999997644321111111110 1110000    00 


Q ss_pred             ----hhhcC---CCCC-----HHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 005257          596 ----RLRAK---GGFD-----EDEVERVLHLGLLCAYPDPRARPTMRQVVKV  635 (705)
Q Consensus       596 ----~l~~~---~~~~-----~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  635 (705)
                          .+...   ...+     ......+.+++..||+++|++||++.|++++
T Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~  283 (286)
T cd07847         232 QFFKGLSIPEPETREPLESKFPNISSPALSFLKGCLQMDPTERLSCEELLEH  283 (286)
T ss_pred             cccccccCCCcccccCHHHHhccCCHHHHHHHHHHhcCCccccCCHHHHhcC
Confidence                00000   0000     1123567899999999999999999998763

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio

>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

Probab=100.00  E-value=5.2e-36  Score=314.58  Aligned_cols=260  Identities=23%  Similarity=0.345  Sum_probs=204.7

Q ss_pred             CCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCC-chhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEEEEe
Q 005257          364 KGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHEN-DGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYD  442 (705)
Q Consensus       364 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~-~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~lV~E  442 (705)
                      ++|+..+.||+|+||+||++....+++.||+|++.... ....+.+.+|+++++.++||||+++++.+.. .+.+++|||
T Consensus         5 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~lv~e   83 (284)
T cd06620           5 EDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAKSSVRKQILRELQIMHECRSPYIVSFYGAFLN-ENNICMCME   83 (284)
T ss_pred             HHHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecCcchHHHHHHHHHHHHHHcCCCCcceEeeeEec-CCEEEEEEe
Confidence            45677889999999999999999889999999886553 3445788999999999999999999999886 578999999


Q ss_pred             eCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecCCCC
Q 005257          443 YMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQ  522 (705)
Q Consensus       443 ~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~~~~  522 (705)
                      |+++++|.+++.+.+   .+++..+..++.+++.||.|||+  ..+++||||||+||+++.++.++|+|||++.......
T Consensus        84 ~~~~~~L~~~~~~~~---~~~~~~~~~~~~~i~~~l~~LH~--~~~i~H~dl~p~nil~~~~~~~~l~d~gl~~~~~~~~  158 (284)
T cd06620          84 FMDCGSLDRIYKKGG---PIPVEILGKIAVAVVEGLTYLYN--VHRIMHRDIKPSNILVNSRGQIKLCDFGVSGELINSI  158 (284)
T ss_pred             cCCCCCHHHHHHhcc---CCCHHHHHHHHHHHHHHHHHHHH--hcCeeccCCCHHHEEECCCCcEEEccCCcccchhhhc
Confidence            999999999886532   68999999999999999999996  3589999999999999999999999999987543222


Q ss_pred             cceeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhHHHHHhhhc-CC
Q 005257          523 VASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRA-KG  601 (705)
Q Consensus       523 ~~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~l~~-~~  601 (705)
                         .....|+..|+|||++.+..++.++|||||||++|||++|+.||..........    .....+.+.+...... ..
T Consensus       159 ---~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~  231 (284)
T cd06620         159 ---ADTFVGTSTYMSPERIQGGKYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQ----DDPMGILDLLQQIVQEPPP  231 (284)
T ss_pred             ---cCccccCcccCCHHHHccCCCCccchHHHHHHHHHHHHhCCCCCcccchhhhhh----hhhhHHHHHHHHHhhccCC
Confidence               123578999999999988889999999999999999999999997543210000    0000001111111110 01


Q ss_pred             CCC-HHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Q 005257          602 GFD-EDEVERVLHLGLLCAYPDPRARPTMRQVVKVL  636 (705)
Q Consensus       602 ~~~-~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L  636 (705)
                      ... ......+.+++.+||+.||++||++.|++++.
T Consensus       232 ~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~e~~~~~  267 (284)
T cd06620         232 RLPSSDFPEDLRDFVDACLLKDPTERPTPQQLCAMP  267 (284)
T ss_pred             CCCchhcCHHHHHHHHHHhcCCcccCcCHHHHhcCc
Confidence            111 22446788999999999999999999999864

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases

Probab=100.00  E-value=1.2e-35  Score=305.43  Aligned_cols=247  Identities=30%  Similarity=0.472  Sum_probs=199.6

Q ss_pred             eEEeecCceEEEEEEEcCCCeEEEEEEeccCCch-hHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEEEEeeCCCCC
Q 005257          370 NVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDG-GTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGS  448 (705)
Q Consensus       370 ~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~~-~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~lV~E~~~~gs  448 (705)
                      ++||+|+||.||++.+.. ++.||+|++...... ..+.+.+|++++++++||||+++++++.. ....++||||+++++
T Consensus         1 ~~lg~g~~g~v~~~~~~~-~~~v~~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~~~v~e~~~~~~   78 (251)
T cd05041           1 EKIGKGNFGDVYKGVLKG-NTEVAVKTCRSTLPPDLKRKFLQEAEILKQYDHPNIVKLIGVCVQ-KQPIYIVMELVPGGS   78 (251)
T ss_pred             CccccCCCceEEEEEEeC-CCcEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeEEEEEEEec-CCCeEEEEEcCCCCc
Confidence            469999999999999987 899999998765443 56789999999999999999999998876 678899999999999


Q ss_pred             hhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecCCCCccee-e
Q 005257          449 LDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVAST-T  527 (705)
Q Consensus       449 L~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~~~~~~~~-~  527 (705)
                      |.+++.+...  .+++..+..++.+++.||.|||+   ++++||||||+||+++.++.+||+|||+++.......... .
T Consensus        79 l~~~l~~~~~--~~~~~~~~~~~~~~~~~l~~lH~---~~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~  153 (251)
T cd05041          79 LLTFLRKKKN--RLTVKKLLQMSLDAAAGMEYLES---KNCIHRDLAARNCLVGENNVLKISDFGMSREEEGGIYTVSDG  153 (251)
T ss_pred             HHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHh---CCEehhhcCcceEEEcCCCcEEEeeccccccccCCcceeccc
Confidence            9999976432  58899999999999999999998   9999999999999999999999999999986543221111 1


Q ss_pred             eeeccccCCCccccccCCCCccccEEEEehhHHHHhh-CCCCCCCCCccHHHHHHHHHHhCchhHHHHHhhhcCCCCCHH
Q 005257          528 RVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLS-GRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRAKGGFDED  606 (705)
Q Consensus       528 ~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~Ellt-G~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~l~~~~~~~~~  606 (705)
                      ...++..|+|||.+.++.++.++|||||||++|||++ |..||......   .....         +.....  ...+..
T Consensus       154 ~~~~~~~y~~PE~~~~~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~~---~~~~~---------~~~~~~--~~~~~~  219 (251)
T cd05041         154 LKQIPIKWTAPEALNYGRYTSESDVWSYGILLWETFSLGDTPYPGMSNQ---QTRER---------IESGYR--MPAPQL  219 (251)
T ss_pred             cCcceeccCChHhhccCCCCcchhHHHHHHHHHHHHhccCCCCccCCHH---HHHHH---------HhcCCC--CCCCcc
Confidence            1233567999999988889999999999999999999 88888654321   11111         111111  112233


Q ss_pred             HHHHHHHHHHHcCCCCCCCCCCHHHHHHHHH
Q 005257          607 EVERVLHLGLLCAYPDPRARPTMRQVVKVLE  637 (705)
Q Consensus       607 ~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  637 (705)
                      ....+.+++.+||+.+|++||++.|+++.|+
T Consensus       220 ~~~~~~~li~~~l~~~p~~Rp~~~ell~~l~  250 (251)
T cd05041         220 CPEEIYRLMLQCWAYDPENRPSFSEIYNELQ  250 (251)
T ss_pred             CCHHHHHHHHHHhccChhhCcCHHHHHHHhh
Confidence            4567899999999999999999999999886

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k

>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=100.00  E-value=9e-36  Score=307.45  Aligned_cols=239  Identities=25%  Similarity=0.421  Sum_probs=191.7

Q ss_pred             eEEeecCceEEEEEEEcCCC----------eEEEEEEeccCCchhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEE
Q 005257          370 NVIGVGGNGKVYKGVLEGGG----------AEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLML  439 (705)
Q Consensus       370 ~~LG~G~fg~Vy~~~~~~~~----------~~vavK~i~~~~~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~l  439 (705)
                      +.||+|+||.||+|.+..++          ..+++|.+...... ...+.+|+.+++.++||||++++++|..  ...++
T Consensus         1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~-~~~~~~e~~~l~~l~h~~i~~~~~~~~~--~~~~l   77 (259)
T cd05037           1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRD-SLAFFETASLMSQLSHKHLVKLYGVCVR--DENIM   77 (259)
T ss_pred             CcccccccceEEEEEEeccCCccccCCccceeeeeeccccchhh-HHHHHHHHHHHHcCCCcchhheeeEEec--CCcEE
Confidence            46999999999999998766          45888877544333 6789999999999999999999998876  56789


Q ss_pred             EEeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCC-------Ceeeeee
Q 005257          440 VYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEM-------NGRLGDF  512 (705)
Q Consensus       440 V~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~-------~~kL~DF  512 (705)
                      ||||+++|+|.+++.....  .+++..+..++.|++.||+|||+   ++++||||||+|||++.++       .+||+||
T Consensus        78 v~e~~~~~~L~~~l~~~~~--~~~~~~~~~~~~~i~~~l~~LH~---~~i~H~dlkp~Nill~~~~~~~~~~~~~kl~Df  152 (259)
T cd05037          78 VEEYVKFGPLDVFLHREKN--NVSLHWKLDVAKQLASALHYLED---KKLVHGNVCGKNILVARYGLNEGYVPFIKLSDP  152 (259)
T ss_pred             EEEcCCCCcHHHHHHhhcc--CCCHHHHHHHHHHHHHHHHHHhh---CCeecccCccceEEEecCccccCCceeEEeCCC
Confidence            9999999999999976433  58999999999999999999998   9999999999999999887       7999999


Q ss_pred             ccceecCCCCcceeeeeeccccCCCccccccC--CCCccccEEEEehhHHHHhh-CCCCCCCCCccHHHHHHHHHHhCch
Q 005257          513 GLARMHGHGQVASTTRVVGTVGYLAPEVFSSG--RASTQTDVFGFGILILEVLS-GRRPIEEGKPNLVEMVWELMVQGKL  589 (705)
Q Consensus       513 Gla~~~~~~~~~~~~~~~gt~~y~APE~~~~~--~~s~ksDVwS~Gvvl~Ellt-G~~Pf~~~~~~~~~~v~~~~~~~~~  589 (705)
                      |++.....     .....++..|+|||++...  .++.++|||||||++|||++ |..|+.......  + ...+...  
T Consensus       153 g~a~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~~~~--~-~~~~~~~--  222 (259)
T cd05037         153 GIPITVLS-----REERVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTLSSSE--K-ERFYQDQ--  222 (259)
T ss_pred             Cccccccc-----ccccccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHHhCCCCCcccCCchh--H-HHHHhcC--
Confidence            99986543     1123567789999999776  78999999999999999999 577776543211  1 0111100  


Q ss_pred             hHHHHHhhhcCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHH
Q 005257          590 LDALDARLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLE  637 (705)
Q Consensus       590 ~~~id~~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  637 (705)
                                 ...+......+.+++..||..+|.+||++.++++.|+
T Consensus       223 -----------~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~  259 (259)
T cd05037         223 -----------HRLPMPDCAELANLINQCWTYDPTKRPSFRAILRDLN  259 (259)
T ss_pred             -----------CCCCCCCchHHHHHHHHHhccChhhCCCHHHHHHhcC
Confidence                       1111111267889999999999999999999998763

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki

>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

Probab=100.00  E-value=2.1e-35  Score=305.96  Aligned_cols=259  Identities=26%  Similarity=0.395  Sum_probs=207.3

Q ss_pred             CCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCC-chhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEEEEe
Q 005257          364 KGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHEN-DGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYD  442 (705)
Q Consensus       364 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~-~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~lV~E  442 (705)
                      ++|+..+.||.|+||+||+|....++..+|+|++.... ....+.+.+|+++++.++|+|++++++.+.. ++..++|+|
T Consensus         1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~~iv~e   79 (267)
T cd06610           1 DDYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQTSVDELRKEVQAMSQCNHPNVVKYYTSFVV-GDELWLVMP   79 (267)
T ss_pred             CcceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcchHHHHHHHHHHHHHhcCCCCEEEEEEEEee-CCEEEEEEe
Confidence            46888999999999999999998889999999986543 3356789999999999999999999998876 678999999


Q ss_pred             eCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecCCCC
Q 005257          443 YMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQ  522 (705)
Q Consensus       443 ~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~~~~  522 (705)
                      ++++++|.+++........+++..+..++.|++.||.|||+   .+++|+||||+||++++++.+||+|||++.......
T Consensus        80 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh~---~~i~h~~l~p~ni~~~~~~~~~l~df~~~~~~~~~~  156 (267)
T cd06610          80 YLSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHS---NGQIHRDIKAGNILLGEDGSVKIADFGVSASLADGG  156 (267)
T ss_pred             ccCCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHhEEEcCCCCEEEcccchHHHhccCc
Confidence            99999999999765433368999999999999999999998   999999999999999999999999999987665433


Q ss_pred             cc---eeeeeeccccCCCccccccC-CCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhHHHHHhhh
Q 005257          523 VA---STTRVVGTVGYLAPEVFSSG-RASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDARLR  598 (705)
Q Consensus       523 ~~---~~~~~~gt~~y~APE~~~~~-~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~l~  598 (705)
                      ..   ......|+..|+|||++... .++.++|||||||++|||++|+.||......  ...........      ..+.
T Consensus       157 ~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~--~~~~~~~~~~~------~~~~  228 (267)
T cd06610         157 DRTRKVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYPPM--KVLMLTLQNDP------PSLE  228 (267)
T ss_pred             cccccccccccCChhhcChHHHccccCcCcccchHhHhHHHHHHHhCCCCccccChh--hhHHHHhcCCC------CCcC
Confidence            22   12335689999999998776 7899999999999999999999999754321  11111111100      0010


Q ss_pred             cCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 005257          599 AKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKV  635 (705)
Q Consensus       599 ~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  635 (705)
                      . ..........+.+++..||+.||++||++.+++++
T Consensus       229 ~-~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~ll~~  264 (267)
T cd06610         229 T-GADYKKYSKSFRKMISLCLQKDPSKRPTAEELLKH  264 (267)
T ss_pred             C-ccccccccHHHHHHHHHHcCCChhhCcCHHHHhhC
Confidence            0 00011334678899999999999999999999863

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1

>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

Probab=100.00  E-value=2.1e-35  Score=304.12  Aligned_cols=250  Identities=25%  Similarity=0.393  Sum_probs=203.6

Q ss_pred             CCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccC--CchhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEEEEe
Q 005257          365 GFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHE--NDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYD  442 (705)
Q Consensus       365 ~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~--~~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~lV~E  442 (705)
                      +|+..+.||+|++|.||++....+++.+|+|++...  .....+.+.+|++++++++|||++++++.+.. ++..++|||
T Consensus         1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~-~~~~~lv~e   79 (256)
T cd08220           1 KYEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNIIEYYENFLE-DKALMIVME   79 (256)
T ss_pred             CceEEEEecccCceEEEEEEEcCCCcEEEEEEEeccccccHHHHHHHHHHHHHhhCCCCchhheeeeEec-CCEEEEEEe
Confidence            477889999999999999999988999999998754  23456788999999999999999999998765 678999999


Q ss_pred             eCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccC-CCeeeeeeccceecCCC
Q 005257          443 YMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKE-MNGRLGDFGLARMHGHG  521 (705)
Q Consensus       443 ~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~-~~~kL~DFGla~~~~~~  521 (705)
                      |+++++|.+++.+... ..+++..+.+++.|++.||.|||+   ++++|+||||+||+++++ +.+||+|||++......
T Consensus        80 ~~~~~~L~~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lh~---~~i~h~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~  155 (256)
T cd08220          80 YAPGGTLAEYIQKRCN-SLLDEDTILHFFVQILLALHHVHT---KLILHRDLKTQNILLDKHKMVVKIGDFGISKILSSK  155 (256)
T ss_pred             cCCCCCHHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEcCCCCEEEEccCCCceecCCC
Confidence            9999999999976432 258999999999999999999998   999999999999999865 45799999999876543


Q ss_pred             CcceeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhHHHHHhhhcCC
Q 005257          522 QVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRAKG  601 (705)
Q Consensus       522 ~~~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~l~~~~  601 (705)
                      ...  ....|+..|+|||.+.+..++.++||||||+++|||++|+.||......  ..+.... .+.         .  .
T Consensus       156 ~~~--~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~--~~~~~~~-~~~---------~--~  219 (256)
T cd08220         156 SKA--YTVVGTPCYISPELCEGKPYNQKSDIWALGCVLYELASLKRAFEAANLP--ALVLKIM-SGT---------F--A  219 (256)
T ss_pred             ccc--cccccCCcccCchhccCCCCCcccchHHHHHHHHHHHhCCCCcccCchH--HHHHHHH-hcC---------C--C
Confidence            221  2246889999999998888999999999999999999999999764321  1111111 110         0  1


Q ss_pred             CCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 005257          602 GFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKV  635 (705)
Q Consensus       602 ~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  635 (705)
                      ..+......+.+++..||+++|++|||+.|+++.
T Consensus       220 ~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~ll~~  253 (256)
T cd08220         220 PISDRYSPDLRQLILSMLNLDPSKRPQLSQIMAQ  253 (256)
T ss_pred             CCCCCcCHHHHHHHHHHccCChhhCCCHHHHhhC
Confidence            1222344568899999999999999999999863

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with

>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

Probab=100.00  E-value=8.1e-36  Score=315.59  Aligned_cols=251  Identities=23%  Similarity=0.373  Sum_probs=205.6

Q ss_pred             CCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCCchhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEEEEee
Q 005257          364 KGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDY  443 (705)
Q Consensus       364 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~lV~E~  443 (705)
                      ++|...+.||+|+||.||+|....+++.||+|.+........+.+.+|+.+++.++|||++++++.+.. ....++||||
T Consensus        19 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-~~~~~lv~e~   97 (297)
T cd06656          19 KKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLV-GDELWVVMEY   97 (297)
T ss_pred             hhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCccchHHHHHHHHHHHHhCCCCCEeeEEEEEec-CCEEEEeecc
Confidence            578889999999999999999988899999999976655566778999999999999999999998876 6789999999


Q ss_pred             CCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecCCCCc
Q 005257          444 MENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQV  523 (705)
Q Consensus       444 ~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~~~~~  523 (705)
                      +++++|.+++.+.    .+++.++..++.|++.||.|||+   .+++||||||+|||++.++.+||+|||++........
T Consensus        98 ~~~~~L~~~~~~~----~~~~~~~~~~~~~l~~~L~~LH~---~~i~H~dL~p~Nili~~~~~~~l~Dfg~~~~~~~~~~  170 (297)
T cd06656          98 LAGGSLTDVVTET----CMDEGQIAAVCRECLQALDFLHS---NQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS  170 (297)
T ss_pred             cCCCCHHHHHHhC----CCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEECCCCCEEECcCccceEccCCcc
Confidence            9999999998542    57899999999999999999998   9999999999999999999999999999976544332


Q ss_pred             ceeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhHHHHHhhhcCCCC
Q 005257          524 ASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRAKGGF  603 (705)
Q Consensus       524 ~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~l~~~~~~  603 (705)
                      . .....+++.|+|||.+.+..++.++|||||||++|||++|+.||....+.  .........+          ......
T Consensus       171 ~-~~~~~~~~~y~aPE~~~~~~~~~~~Di~slGvil~~l~tg~~pf~~~~~~--~~~~~~~~~~----------~~~~~~  237 (297)
T cd06656         171 K-RSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPL--RALYLIATNG----------TPELQN  237 (297)
T ss_pred             C-cCcccCCccccCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcc--hheeeeccCC----------CCCCCC
Confidence            2 22346889999999998888999999999999999999999999754321  0000000000          000111


Q ss_pred             CHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 005257          604 DEDEVERVLHLGLLCAYPDPRARPTMRQVVKV  635 (705)
Q Consensus       604 ~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  635 (705)
                      +......+.+++..||+.+|++||++.++++.
T Consensus       238 ~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~  269 (297)
T cd06656         238 PERLSAVFRDFLNRCLEMDVDRRGSAKELLQH  269 (297)
T ss_pred             ccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence            22334567889999999999999999999883

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>smart00219 TyrKc Tyrosine kinase, catalytic domain

Probab=100.00  E-value=2.2e-35  Score=303.86  Aligned_cols=252  Identities=30%  Similarity=0.513  Sum_probs=203.9

Q ss_pred             CCcceEEeecCceEEEEEEEcCCC----eEEEEEEeccCCch-hHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEEE
Q 005257          366 FSEENVIGVGGNGKVYKGVLEGGG----AEIAVKRISHENDG-GTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLV  440 (705)
Q Consensus       366 f~~~~~LG~G~fg~Vy~~~~~~~~----~~vavK~i~~~~~~-~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~lV  440 (705)
                      |+..+.||+|+||.||++.....+    ..||+|.+...... ..+.+..|+.++..++|+||+++++++.. .+..+++
T Consensus         1 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~~~i   79 (258)
T smart00219        1 LTLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADEQQIEEFLREARIMRKLDHPNIVKLLGVCTE-EEPLMIV   79 (258)
T ss_pred             CcccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCChHHHHHHHHHHHHHHhcCCCchheEEEEEcC-CCeeEEE
Confidence            345788999999999999998765    88999999765443 56789999999999999999999998886 5788999


Q ss_pred             EeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecCC
Q 005257          441 YDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGH  520 (705)
Q Consensus       441 ~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~~  520 (705)
                      |||+++++|.+++...... .+++.++..++.|++.||+|||+   .+++|+||||+||++++++.++|+|||+++....
T Consensus        80 ~e~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~ql~~~l~~lh~---~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~  155 (258)
T smart00219       80 MEYMEGGDLLDYLRKNRPK-ELSLSDLLSFALQIARGMEYLES---KNFIHRDLAARNCLVGENLVVKISDFGLSRDLYD  155 (258)
T ss_pred             EeccCCCCHHHHHHhhhhc-cCCHHHHHHHHHHHHHHHHHHhc---CCeeecccccceEEEccCCeEEEcccCCceeccc
Confidence            9999999999999764321 28999999999999999999998   9999999999999999999999999999987655


Q ss_pred             CCcceeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhh-CCCCCCCCCccHHHHHHHHHHhCchhHHHHHhhhc
Q 005257          521 GQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLS-GRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRA  599 (705)
Q Consensus       521 ~~~~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~Ellt-G~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~l~~  599 (705)
                      ..........++..|+|||.+.+..++.++||||+|++++||++ |+.||.....   ....+....+..          
T Consensus       156 ~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~i~~~l~~~g~~p~~~~~~---~~~~~~~~~~~~----------  222 (258)
T smart00219      156 DDYYKKKGGKLPIRWMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGESPYPGMSN---EEVLEYLKKGYR----------  222 (258)
T ss_pred             ccccccccCCCcccccChHHhccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCH---HHHHHHHhcCCC----------
Confidence            43222212236789999999988889999999999999999998 7888865332   111122222211          


Q ss_pred             CCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Q 005257          600 KGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVL  636 (705)
Q Consensus       600 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L  636 (705)
                       ..........+.+++.+|+..+|++|||+.|+++.|
T Consensus       223 -~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~l  258 (258)
T smart00219      223 -LPKPENCPPEIYKLMLQCWAEDPEDRPTFSELVEIL  258 (258)
T ss_pred             -CCCCCcCCHHHHHHHHHHCcCChhhCcCHHHHHhhC
Confidence             111222456788899999999999999999998864

Phosphotransferases. Tyrosine-specific kinase subfamily.

>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

Probab=100.00  E-value=5.4e-36  Score=313.14  Aligned_cols=247  Identities=26%  Similarity=0.415  Sum_probs=201.7

Q ss_pred             CCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCC-chhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEEEEeeC
Q 005257          366 FSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHEN-DGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYM  444 (705)
Q Consensus       366 f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~-~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~lV~E~~  444 (705)
                      |+..+.||+|+||.||+|.+..++..||+|.+.... ....+.+.+|++++++++||||+++++++.. +...++||||+
T Consensus         6 y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~lv~e~~   84 (277)
T cd06642           6 FTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYYGSYLK-GTKLWIIMEYL   84 (277)
T ss_pred             HHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEeccccchHHHHHHHHHHHHHHcCCCCccHhhhccccc-CCceEEEEEcc
Confidence            455677999999999999998889999999987543 3445678999999999999999999998876 67899999999


Q ss_pred             CCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecCCCCcc
Q 005257          445 ENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVA  524 (705)
Q Consensus       445 ~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~~~~~~  524 (705)
                      ++++|.+++..    ..+++..+..++.|++.||.|||+   .+++|+||+|+||++++++.++|+|||++........ 
T Consensus        85 ~~~~L~~~~~~----~~~~~~~~~~~~~~i~~~l~~lH~---~~ivH~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~-  156 (277)
T cd06642          85 GGGSALDLLKP----GPLEETYIATILREILKGLDYLHS---ERKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQI-  156 (277)
T ss_pred             CCCcHHHHhhc----CCCCHHHHHHHHHHHHHHHHHHhc---CCeeccCCChheEEEeCCCCEEEccccccccccCcch-
Confidence            99999998853    258999999999999999999998   9999999999999999999999999999976543322 


Q ss_pred             eeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhHHHHHhhhcCCCCC
Q 005257          525 STTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRAKGGFD  604 (705)
Q Consensus       525 ~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~l~~~~~~~  604 (705)
                      ......|+..|+|||++.+..++.++|||||||++|||++|+.|+....+..  .. ..         +.....  ....
T Consensus       157 ~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~--~~-~~---------~~~~~~--~~~~  222 (277)
T cd06642         157 KRNTFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMR--VL-FL---------IPKNSP--PTLE  222 (277)
T ss_pred             hhhcccCcccccCHHHhCcCCCchhhhHHHHHHHHHHHHhCCCCCcccchhh--HH-hh---------hhcCCC--CCCC
Confidence            1122467889999999998889999999999999999999999987543211  10 00         111101  1122


Q ss_pred             HHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 005257          605 EDEVERVLHLGLLCAYPDPRARPTMRQVVKV  635 (705)
Q Consensus       605 ~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  635 (705)
                      ......+.+++..||+.+|++||++.+++++
T Consensus       223 ~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~  253 (277)
T cd06642         223 GQYSKPFKEFVEACLNKDPRFRPTAKELLKH  253 (277)
T ss_pred             cccCHHHHHHHHHHccCCcccCcCHHHHHHh
Confidence            3345668899999999999999999999985

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25

>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases

Probab=100.00  E-value=1e-35  Score=309.54  Aligned_cols=253  Identities=23%  Similarity=0.391  Sum_probs=189.9

Q ss_pred             EEeecCceEEEEEEEcC--CCeEEEEEEeccCC-chhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEEEEeeCCCC
Q 005257          371 VIGVGGNGKVYKGVLEG--GGAEIAVKRISHEN-DGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENG  447 (705)
Q Consensus       371 ~LG~G~fg~Vy~~~~~~--~~~~vavK~i~~~~-~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~lV~E~~~~g  447 (705)
                      .||+|+||.||+|....  ....+|+|.+.... ......+.+|+.+++.++||||+++++.|.. ....++||||+++|
T Consensus         2 ~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~~-~~~~~lv~e~~~~g   80 (269)
T cd05042           2 EIGNGWFGKVLLGEAHRGMSKARVVVKELRASATPDEQLLFLQEVQPYRELNHPNVLQCLGQCIE-SIPYLLVLEFCPLG   80 (269)
T ss_pred             cCCccCCceEEEEEEecCCCCeEEEEeecCccCChHHHHHHHHHHHHHHhCCCCCcceEEEEECC-CCceEEEEEeCCCC
Confidence            58999999999997643  34578999876543 3345678999999999999999999998876 67899999999999


Q ss_pred             ChhHHHHhcCC--CCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecCCCCcce
Q 005257          448 SLDKWIFQCDG--SMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVAS  525 (705)
Q Consensus       448 sL~~~L~~~~~--~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~~~~~~~  525 (705)
                      +|.+++.....  ....++.....++.|++.||+|||+   ++|+||||||+|||+++++.+||+|||+++.........
T Consensus        81 ~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~  157 (269)
T cd05042          81 DLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQ---ADFIHSDLALRNCQLTADLSVKIGDYGLALEQYPEDYYI  157 (269)
T ss_pred             cHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHh---cCEecccccHhheEecCCCcEEEeccccccccccchhee
Confidence            99999976432  2245678889999999999999998   999999999999999999999999999987543322111


Q ss_pred             -eeeeeccccCCCcccccc-------CCCCccccEEEEehhHHHHhh-CCCCCCCCCccHHHHHHHHHHhCchhHHHHHh
Q 005257          526 -TTRVVGTVGYLAPEVFSS-------GRASTQTDVFGFGILILEVLS-GRRPIEEGKPNLVEMVWELMVQGKLLDALDAR  596 (705)
Q Consensus       526 -~~~~~gt~~y~APE~~~~-------~~~s~ksDVwS~Gvvl~Ellt-G~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~  596 (705)
                       .....++..|+|||++..       ..++.++|||||||++|||++ |..||......  +........+.. .     
T Consensus       158 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~--~~~~~~~~~~~~-~-----  229 (269)
T cd05042         158 TKDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLSDE--QVLKQVVREQDI-K-----  229 (269)
T ss_pred             ccCCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcCCHH--HHHHHHhhccCc-c-----
Confidence             122345678999998743       356889999999999999999 78888654321  111111111110 0     


Q ss_pred             hhcCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHH
Q 005257          597 LRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLE  637 (705)
Q Consensus       597 l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  637 (705)
                      +.. ...+......+.+++..|| .||++||++++|++.|.
T Consensus       230 ~~~-~~~~~~~~~~~~~~~~~~~-~dp~~Rpt~~~v~~~l~  268 (269)
T cd05042         230 LPK-PQLDLKYSDRWYEVMQFCW-LDPETRPTAEEVHELLT  268 (269)
T ss_pred             CCC-CcccccCCHHHHHHHHHHh-cCcccccCHHHHHHHhc
Confidence            000 1112233456677888898 59999999999999873

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina

>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros

Probab=100.00  E-value=8.5e-36  Score=309.81  Aligned_cols=250  Identities=29%  Similarity=0.501  Sum_probs=198.3

Q ss_pred             eEEeecCceEEEEEEEcCCC------eEEEEEEeccCC-chhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEEEEe
Q 005257          370 NVIGVGGNGKVYKGVLEGGG------AEIAVKRISHEN-DGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYD  442 (705)
Q Consensus       370 ~~LG~G~fg~Vy~~~~~~~~------~~vavK~i~~~~-~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~lV~E  442 (705)
                      +.||+|+||.||+|...+..      +.+|+|.+.... ......+.+|+.+++.++||||++++++|.. ....++|||
T Consensus         1 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~~v~e   79 (269)
T cd05044           1 NFLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNHPNIVKLLGVCLL-NEPQYIIME   79 (269)
T ss_pred             CccccccceeEEeeeecccccCcccceeehhhhhhcccchhhHHHHHHHHHHHHhcCCCCeeeEeeeecC-CCCeEEEEe
Confidence            36899999999999986433      689999886543 2456688999999999999999999998876 567899999


Q ss_pred             eCCCCChhHHHHhcC----CCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCC-----Ceeeeeec
Q 005257          443 YMENGSLDKWIFQCD----GSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEM-----NGRLGDFG  513 (705)
Q Consensus       443 ~~~~gsL~~~L~~~~----~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~-----~~kL~DFG  513 (705)
                      |+++++|.+++....    ....+++.++..++.|++.||.|||+   .+++|+||||+||+++.+.     .+||+|||
T Consensus        80 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~---~~i~H~dl~p~nil~~~~~~~~~~~~~l~dfg  156 (269)
T cd05044          80 LMEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQ---MHFIHRDLAARNCLVSEKGYDADRVVKIGDFG  156 (269)
T ss_pred             ccCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHh---CCcccCCCChheEEEecCCCCCCcceEECCcc
Confidence            999999999997532    12358899999999999999999998   8999999999999999877     89999999


Q ss_pred             cceecCCCCcc-eeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhh-CCCCCCCCCccHHHHHHHHHHhCchhH
Q 005257          514 LARMHGHGQVA-STTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLS-GRRPIEEGKPNLVEMVWELMVQGKLLD  591 (705)
Q Consensus       514 la~~~~~~~~~-~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~Ellt-G~~Pf~~~~~~~~~~v~~~~~~~~~~~  591 (705)
                      +++........ ......++..|+|||++.++.++.++|||||||++|||++ |+.||......  +. ...+..+.   
T Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt~g~~p~~~~~~~--~~-~~~~~~~~---  230 (269)
T cd05044         157 LARDIYKSDYYRKEGEGLLPVRWMAPESLLDGKFTTQSDVWSFGVLMWEILTLGQQPYPALNNQ--EV-LQHVTAGG---  230 (269)
T ss_pred             cccccccccccccCcccCCCccccCHHHHccCCcccchhHHHHHHHHHHHHHcCCCCCcccCHH--HH-HHHHhcCC---
Confidence            99765432211 1112345678999999998899999999999999999998 99998754321  11 11111111   


Q ss_pred             HHHHhhhcCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHH
Q 005257          592 ALDARLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLE  637 (705)
Q Consensus       592 ~id~~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  637 (705)
                            .  ...+......+.+++.+||.++|++||++.++++.|+
T Consensus       231 ------~--~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~  268 (269)
T cd05044         231 ------R--LQKPENCPDKIYQLMTNCWAQDPSERPTFDRIQEILQ  268 (269)
T ss_pred             ------c--cCCcccchHHHHHHHHHHcCCCcccCCCHHHHHHHHh
Confidence                  0  1122334567889999999999999999999999886

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male

>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

Probab=100.00  E-value=1.9e-35  Score=310.20  Aligned_cols=262  Identities=24%  Similarity=0.377  Sum_probs=204.6

Q ss_pred             CCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccC--CchhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEEEE
Q 005257          364 KGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHE--NDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVY  441 (705)
Q Consensus       364 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~--~~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~lV~  441 (705)
                      ++|+..+.||+|++|.||+|.+..+++.||+|+++..  .....+.+.+|++++++++|+||+++++++.. ++..++||
T Consensus         1 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~~iv~   79 (288)
T cd07833           1 NKYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENIVNLKEAFRR-KGRLYLVF   79 (288)
T ss_pred             CceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhcccccchhHHHHHHHHHHhcCCCCeeehhheEEE-CCEEEEEE
Confidence            3688899999999999999999988999999988654  23345778999999999999999999998876 67899999


Q ss_pred             eeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecCCC
Q 005257          442 DYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHG  521 (705)
Q Consensus       442 E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~~~  521 (705)
                      ||++++.+..++.+.   ..+++.++..++.|++.||.|||+   .+++|+||+|+||++++++.+||+|||++......
T Consensus        80 e~~~~~~l~~~~~~~---~~~~~~~~~~~~~~i~~~l~~LH~---~~i~H~dl~~~ni~~~~~~~~kl~d~g~~~~~~~~  153 (288)
T cd07833          80 EYVERTLLELLEASP---GGLPPDAVRSYIWQLLQAIAYCHS---HNIIHRDIKPENILVSESGVLKLCDFGFARALRAR  153 (288)
T ss_pred             ecCCCCHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHeEECCCCCEEEEeeecccccCCC
Confidence            999987776655432   258999999999999999999998   99999999999999999999999999999876554


Q ss_pred             CcceeeeeeccccCCCccccccC-CCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHH-hCchhHHHHHhhhc
Q 005257          522 QVASTTRVVGTVGYLAPEVFSSG-RASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMV-QGKLLDALDARLRA  599 (705)
Q Consensus       522 ~~~~~~~~~gt~~y~APE~~~~~-~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~-~~~~~~~id~~l~~  599 (705)
                      .........++..|+|||++.+. .++.++||||||+++|||++|+.||.....  .+..+.... .+.+..........
T Consensus       154 ~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~  231 (288)
T cd07833         154 PASPLTDYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSD--IDQLYLIQKCLGPLPPSHQELFSS  231 (288)
T ss_pred             ccccccCcccccCCcCCchhcCCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCH--HHHHHHHHHHhCCCCHHHhhhccc
Confidence            43233345788999999999887 789999999999999999999999975432  222222111 01110000000000


Q ss_pred             ------------------CCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHH
Q 005257          600 ------------------KGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVK  634 (705)
Q Consensus       600 ------------------~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~  634 (705)
                                        ...++......+.+++..||..+|++||+++++++
T Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~  284 (288)
T cd07833         232 NPRFAGVAFPEPSQPESLERRYPGKVSSPALDFLKACLRMDPKERLTCDELLQ  284 (288)
T ss_pred             CccccccccCCCCCcHHHHHhcCCccchHHHHHHHHHhccCchhcccHHHHhc
Confidence                              00111123567899999999999999999999876

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning

>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

Probab=100.00  E-value=3.2e-35  Score=304.20  Aligned_cols=250  Identities=27%  Similarity=0.450  Sum_probs=202.7

Q ss_pred             CCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCCc--hhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEEEEe
Q 005257          365 GFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHEND--GGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYD  442 (705)
Q Consensus       365 ~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~--~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~lV~E  442 (705)
                      +|...+.||+|+||.||+|....+++.|++|.++....  ...+.+.+|+.++++++|+||+++++.+.. .+..++|+|
T Consensus         1 ~y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~-~~~~~lv~e   79 (264)
T cd06626           1 RWQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYYGVEVH-REKVYIFME   79 (264)
T ss_pred             CceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECcccchHHHHHHHHHHHHHHhCCCCChhheeeeEec-CCEEEEEEe
Confidence            47788999999999999999988899999999876544  366789999999999999999999998765 678899999


Q ss_pred             eCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecCCCC
Q 005257          443 YMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQ  522 (705)
Q Consensus       443 ~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~~~~  522 (705)
                      |+++++|.+++....   .+++..+..++.|++.||.|||+   .+++|+||+|+||++++++.+||+|||++.......
T Consensus        80 ~~~~~~L~~~~~~~~---~~~~~~~~~i~~~i~~~l~~lh~---~~i~H~dl~~~nil~~~~~~~kl~d~g~~~~~~~~~  153 (264)
T cd06626          80 YCSGGTLEELLEHGR---ILDEHVIRVYTLQLLEGLAYLHS---HGIVHRDIKPANIFLDHNGVIKLGDFGCAVKLKNNT  153 (264)
T ss_pred             cCCCCcHHHHHhhcC---CCChHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEECCCCCEEEcccccccccCCCC
Confidence            999999999987532   58899999999999999999998   999999999999999999999999999998765433


Q ss_pred             cceee---eeeccccCCCccccccCC---CCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhHHHHHh
Q 005257          523 VASTT---RVVGTVGYLAPEVFSSGR---ASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDAR  596 (705)
Q Consensus       523 ~~~~~---~~~gt~~y~APE~~~~~~---~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~  596 (705)
                      .....   ...++..|+|||++.+..   .+.++||||||+++|||++|+.||....... ...... ..+.     .  
T Consensus       154 ~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~~~~-~~~~~~-~~~~-----~--  224 (264)
T cd06626         154 TTMGEEVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDNEF-QIMFHV-GAGH-----K--  224 (264)
T ss_pred             CcccccccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCccCCcchH-HHHHHH-hcCC-----C--
Confidence            22211   246788999999998766   8899999999999999999999997543211 111110 0010     0  


Q ss_pred             hhcCCCCCH--HHHHHHHHHHHHcCCCCCCCCCCHHHHHH
Q 005257          597 LRAKGGFDE--DEVERVLHLGLLCAYPDPRARPTMRQVVK  634 (705)
Q Consensus       597 l~~~~~~~~--~~~~~l~~l~~~Cl~~dP~~RPs~~evl~  634 (705)
                          ...+.  .....+.+++..||+.+|++||++.+++.
T Consensus       225 ----~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~  260 (264)
T cd06626         225 ----PPIPDSLQLSPEGKDFLDRCLESDPKKRPTASELLQ  260 (264)
T ss_pred             ----CCCCcccccCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence                11111  12456788999999999999999999875

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4

>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]

Probab=100.00  E-value=2e-36  Score=326.49  Aligned_cols=249  Identities=24%  Similarity=0.350  Sum_probs=207.4

Q ss_pred             CCcceEEeecCceEEEEEEEcCC---CeEEEEEEeccCCch-hHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEEEE
Q 005257          366 FSEENVIGVGGNGKVYKGVLEGG---GAEIAVKRISHENDG-GTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVY  441 (705)
Q Consensus       366 f~~~~~LG~G~fg~Vy~~~~~~~---~~~vavK~i~~~~~~-~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~lV~  441 (705)
                      ....++||+|.||.|++|.+...   ...||||.++..... ...+|++|+.+|.+|+|||+++|+|+..+  ..+.+|+
T Consensus       112 i~l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~~mddflrEas~M~~L~H~hliRLyGvVl~--qp~mMV~  189 (1039)
T KOG0199|consen  112 IKLYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNAIMDDFLREASHMLKLQHPHLIRLYGVVLD--QPAMMVF  189 (1039)
T ss_pred             HHHHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccchhHHHHHHHHHHHHhccCcceeEEeeeecc--chhhHHh
Confidence            34467899999999999998642   357999999876544 67899999999999999999999999875  4678999


Q ss_pred             eeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecCCC
Q 005257          442 DYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHG  521 (705)
Q Consensus       442 E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~~~  521 (705)
                      |.++.|||.+.|++ ..+..|....+..++.|||.||.||..   +++|||||.++|+||-....+||+||||.|.+..+
T Consensus       190 ELaplGSLldrLrk-a~~~~llv~~Lcdya~QiA~aM~YLes---krlvHRDLAARNlllasprtVKI~DFGLmRaLg~n  265 (1039)
T KOG0199|consen  190 ELAPLGSLLDRLRK-AKKAILLVSRLCDYAMQIAKAMQYLES---KRLVHRDLAARNLLLASPRTVKICDFGLMRALGEN  265 (1039)
T ss_pred             hhcccchHHHHHhh-ccccceeHHHHHHHHHHHHHHHHHHhh---hhhhhhhhhhhhheecccceeeeecccceeccCCC
Confidence            99999999999988 334478888999999999999999998   99999999999999999999999999999987765


Q ss_pred             Ccceee--eeeccccCCCccccccCCCCccccEEEEehhHHHHhh-CCCCCCCCCccHHHHHHHHHHhCchhHHHHHhhh
Q 005257          522 QVASTT--RVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLS-GRRPIEEGKPNLVEMVWELMVQGKLLDALDARLR  598 (705)
Q Consensus       522 ~~~~~~--~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~Ellt-G~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~l~  598 (705)
                      ......  ...-...|+|||.+...+++.++|||+|||.+|||++ |..||.+-...            .+++.+|.+-+
T Consensus       266 ed~Yvm~p~rkvPfAWCaPEsLrh~kFShaSDvWmyGVTiWEMFtyGEePW~G~~g~------------qIL~~iD~~er  333 (1039)
T KOG0199|consen  266 EDMYVMAPQRKVPFAWCAPESLRHRKFSHASDVWMYGVTIWEMFTYGEEPWVGCRGI------------QILKNIDAGER  333 (1039)
T ss_pred             CcceEecCCCcCcccccCHhHhccccccccchhhhhhhhHHhhhccCCCCCCCCCHH------------HHHHhcccccc
Confidence            443311  1122567999999999999999999999999999999 89999764421            12344443322


Q ss_pred             cCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHH
Q 005257          599 AKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVK  634 (705)
Q Consensus       599 ~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~  634 (705)
                        ..-+..|.+.+++++..||..+|++||++..|.+
T Consensus       334 --LpRPk~csedIY~imk~cWah~paDRptFsair~  367 (1039)
T KOG0199|consen  334 --LPRPKYCSEDIYQIMKNCWAHNPADRPTFSAIRE  367 (1039)
T ss_pred             --CCCCCCChHHHHHHHHHhccCCccccccHHHHHH
Confidence              3345678899999999999999999999999973

>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

Probab=100.00  E-value=2.8e-35  Score=305.61  Aligned_cols=252  Identities=23%  Similarity=0.409  Sum_probs=203.0

Q ss_pred             CCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCC------chhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceE
Q 005257          365 GFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHEN------DGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLM  438 (705)
Q Consensus       365 ~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~------~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~  438 (705)
                      +|+..+.||+|++|.||++....+++.+|+|.+....      ....+.+.+|++++++++|+||+++++++.. .+..+
T Consensus         1 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~   79 (268)
T cd06630           1 EWLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATCE-DSHFN   79 (268)
T ss_pred             CccccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceecc-CCeEE
Confidence            4777899999999999999998889999999986542      1234678999999999999999999999876 67889


Q ss_pred             EEEeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCC-Ceeeeeecccee
Q 005257          439 LVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEM-NGRLGDFGLARM  517 (705)
Q Consensus       439 lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~-~~kL~DFGla~~  517 (705)
                      +|+||+++++|.+++.+..   .+++..+..++.|++.||.|||+   .+++|+||||+||+++.++ .+||+|||++..
T Consensus        80 ~v~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~ql~~al~~LH~---~~i~H~~i~~~nil~~~~~~~~~l~dfg~~~~  153 (268)
T cd06630          80 LFVEWMAGGSVSHLLSKYG---AFKEAVIINYTEQLLRGLSYLHE---NQIIHRDVKGANLLIDSTGQRLRIADFGAAAR  153 (268)
T ss_pred             EEEeccCCCcHHHHHHHhC---CCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEcCCCCEEEEcccccccc
Confidence            9999999999999997543   68899999999999999999998   9999999999999998776 599999999876


Q ss_pred             cCCCCcc---eeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhhCCCCCCCCCcc-HHHHHHHHHHhCchhHHH
Q 005257          518 HGHGQVA---STTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPN-LVEMVWELMVQGKLLDAL  593 (705)
Q Consensus       518 ~~~~~~~---~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~-~~~~v~~~~~~~~~~~~i  593 (705)
                      .......   ......|+..|+|||.+.+..++.++||||+||+++||++|+.||...... ..........        
T Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~--------  225 (268)
T cd06630         154 LAAKGTGAGEFQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATAKPPWNAEKHSNHLALIFKIAS--------  225 (268)
T ss_pred             cccccccCCccccccccccceeCHhHhccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCcchHHHHHHHhc--------
Confidence            6433111   112346789999999998888999999999999999999999999653321 1111111000        


Q ss_pred             HHhhhcCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHH
Q 005257          594 DARLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVK  634 (705)
Q Consensus       594 d~~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~  634 (705)
                         .......+......+.+++.+|++.+|++||++.++++
T Consensus       226 ---~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~ll~  263 (268)
T cd06630         226 ---ATTAPSIPEHLSPGLRDVTLRCLELQPEDRPPSRELLK  263 (268)
T ss_pred             ---cCCCCCCchhhCHHHHHHHHHHcCCCcccCcCHHHHhc
Confidence               00112334445577889999999999999999999886

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their

>PHA03209 serine/threonine kinase US3; Provisional

Probab=100.00  E-value=1.3e-35  Score=322.55  Aligned_cols=194  Identities=22%  Similarity=0.372  Sum_probs=166.7

Q ss_pred             HhCCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCCchhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEEEE
Q 005257          362 ATKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVY  441 (705)
Q Consensus       362 at~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~lV~  441 (705)
                      ...+|...+.||+|+||.||+|....++..||+|.....      ....|+.++++++||||+++++++.. ....++|+
T Consensus        64 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~------~~~~E~~~l~~l~h~~iv~~~~~~~~-~~~~~lv~  136 (357)
T PHA03209         64 ASLGYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQKG------TTLIEAMLLQNVNHPSVIRMKDTLVS-GAITCMVL  136 (357)
T ss_pred             hhcCcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCcc------ccHHHHHHHHhCCCCCCcChhheEEe-CCeeEEEE
Confidence            345799999999999999999999988899999975332      23569999999999999999999886 66789999


Q ss_pred             eeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecCCC
Q 005257          442 DYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHG  521 (705)
Q Consensus       442 E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~~~  521 (705)
                      |++. ++|.+++....  ..+++.++..++.||+.||.|||+   ++|+||||||+|||++.++.+||+|||+++.....
T Consensus       137 e~~~-~~l~~~l~~~~--~~~~~~~~~~i~~qi~~aL~~LH~---~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~  210 (357)
T PHA03209        137 PHYS-SDLYTYLTKRS--RPLPIDQALIIEKQILEGLRYLHA---QRIIHRDVKTENIFINDVDQVCIGDLGAAQFPVVA  210 (357)
T ss_pred             EccC-CcHHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEECCCCCEEEecCccccccccC
Confidence            9995 68888886543  268999999999999999999998   99999999999999999999999999999753322


Q ss_pred             CcceeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhhCCCCCC
Q 005257          522 QVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIE  570 (705)
Q Consensus       522 ~~~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~  570 (705)
                        .......||+.|+|||++.+..++.++|||||||++|||+++..|+.
T Consensus       211 --~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvvl~ell~~~~~~f  257 (357)
T PHA03209        211 --PAFLGLAGTVETNAPEVLARDKYNSKADIWSAGIVLFEMLAYPSTIF  257 (357)
T ss_pred             --cccccccccccccCCeecCCCCCCchhhHHHHHHHHHHHHHcCCccc
Confidence              12233578999999999998899999999999999999998665553

>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase

Probab=100.00  E-value=1.7e-35  Score=313.53  Aligned_cols=262  Identities=25%  Similarity=0.372  Sum_probs=199.6

Q ss_pred             CCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCC-chhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEEEEe
Q 005257          364 KGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHEN-DGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYD  442 (705)
Q Consensus       364 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~-~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~lV~E  442 (705)
                      ++|...+.||+|+||.||+|....+++.||+|.+.... ......+.+|+.++++++||||+++++++.. ++..++|||
T Consensus         6 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~-~~~~~lv~e   84 (301)
T cd07873           6 ETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHT-EKSLTLVFE   84 (301)
T ss_pred             cceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEecccccCchhHHHHHHHHHHhcCCCCcceEEEEEec-CCeEEEEEe
Confidence            46888999999999999999999889999999986543 2334567889999999999999999999876 678999999


Q ss_pred             eCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecCCCC
Q 005257          443 YMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQ  522 (705)
Q Consensus       443 ~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~~~~  522 (705)
                      |++ ++|..++.....  .+++..+..++.|++.||.|||+   .+++|+||||+||++++++.+||+|||++.......
T Consensus        85 ~~~-~~l~~~l~~~~~--~~~~~~~~~~~~qi~~aL~~lH~---~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~  158 (301)
T cd07873          85 YLD-KDLKQYLDDCGN--SINMHNVKLFLFQLLRGLNYCHR---RKVLHRDLKPQNLLINERGELKLADFGLARAKSIPT  158 (301)
T ss_pred             ccc-cCHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHh---CCeeCCCCCHHHEEECCCCcEEECcCcchhccCCCC
Confidence            997 589888865432  58899999999999999999998   999999999999999999999999999997654322


Q ss_pred             cceeeeeeccccCCCcccccc-CCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHH-hCch-hHH----HHH
Q 005257          523 VASTTRVVGTVGYLAPEVFSS-GRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMV-QGKL-LDA----LDA  595 (705)
Q Consensus       523 ~~~~~~~~gt~~y~APE~~~~-~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~-~~~~-~~~----id~  595 (705)
                      .. .....+++.|+|||.+.+ ..++.++|||||||++|||++|+.||......  +.+..... .+.. ...    +..
T Consensus       159 ~~-~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~  235 (301)
T cd07873         159 KT-YSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVE--EQLHFIFRILGTPTEETWPGILSN  235 (301)
T ss_pred             Cc-ccccceeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCCCCCCHH--HHHHHHHHHcCCCChhhchhhhcc
Confidence            21 122356889999999865 45788999999999999999999999765421  11111100 0000 000    000


Q ss_pred             -hhh--cCCCC--------CHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 005257          596 -RLR--AKGGF--------DEDEVERVLHLGLLCAYPDPRARPTMRQVVKV  635 (705)
Q Consensus       596 -~l~--~~~~~--------~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  635 (705)
                       ...  ....+        .......+.+++.+|++.||.+|||+.|++++
T Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~eil~h  286 (301)
T cd07873         236 EEFKSYNYPKYRADCLHNHAPRLDSDGAELLSKLLQFEGRKRISAEEAMKH  286 (301)
T ss_pred             ccccccccCccccccHHhhcCCCCHHHHHHHHHHhcCCcccCcCHHHHhcC
Confidence             000  00000        01123457889999999999999999999873

Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl

>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

Probab=100.00  E-value=2.2e-35  Score=308.64  Aligned_cols=248  Identities=26%  Similarity=0.394  Sum_probs=205.2

Q ss_pred             CCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCC-chhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEEEEee
Q 005257          365 GFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHEN-DGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDY  443 (705)
Q Consensus       365 ~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~-~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~lV~E~  443 (705)
                      .|+..+.||.|+||.||+|.+..++..||+|.+.... ......+.+|++++++++||||+++++.+.. ....++||||
T Consensus         5 ~y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~lv~e~   83 (277)
T cd06640           5 LFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLK-GTKLWIIMEY   83 (277)
T ss_pred             hhhhhhhcccCCCeEEEEEEEccCCEEEEEEEEeccccHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEE-CCEEEEEEec
Confidence            4666788999999999999998889999999987543 3456778999999999999999999998876 6789999999


Q ss_pred             CCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecCCCCc
Q 005257          444 MENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQV  523 (705)
Q Consensus       444 ~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~~~~~  523 (705)
                      +++++|.+++..    ..+++.++..++.|++.||.|||+   .+++|+||+|+||+++.++.++|+|||++........
T Consensus        84 ~~~~~L~~~i~~----~~l~~~~~~~~~~~l~~~l~~lh~---~~ivH~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~  156 (277)
T cd06640          84 LGGGSALDLLRA----GPFDEFQIATMLKEILKGLDYLHS---EKKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQI  156 (277)
T ss_pred             CCCCcHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHh---CCccCcCCChhhEEEcCCCCEEEcccccceeccCCcc
Confidence            999999998853    258899999999999999999998   9999999999999999999999999999977654332


Q ss_pred             ceeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhHHHHHhhhcCCCC
Q 005257          524 ASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRAKGGF  603 (705)
Q Consensus       524 ~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~l~~~~~~  603 (705)
                       ......++..|+|||++.+..++.++|||||||++|||++|+.||....+..  .. .....+         .  ....
T Consensus       157 -~~~~~~~~~~y~apE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~--~~-~~~~~~---------~--~~~~  221 (277)
T cd06640         157 -KRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMR--VL-FLIPKN---------N--PPTL  221 (277)
T ss_pred             -ccccccCcccccCHhHhccCCCccHHHHHHHHHHHHHHHHCCCCCCCcChHh--Hh-hhhhcC---------C--CCCC
Confidence             2223467889999999988889999999999999999999999997643210  00 011111         0  1223


Q ss_pred             CHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 005257          604 DEDEVERVLHLGLLCAYPDPRARPTMRQVVKV  635 (705)
Q Consensus       604 ~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  635 (705)
                      .......+.+++..||+.+|++||++.++++.
T Consensus       222 ~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~  253 (277)
T cd06640         222 TGEFSKPFKEFIDACLNKDPSFRPTAKELLKH  253 (277)
T ss_pred             chhhhHHHHHHHHHHcccCcccCcCHHHHHhC
Confidence            34556778999999999999999999999875

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter

>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha

Probab=100.00  E-value=1.3e-35  Score=318.35  Aligned_cols=260  Identities=22%  Similarity=0.283  Sum_probs=195.7

Q ss_pred             cceEEeec--CceEEEEEEEcCCCeEEEEEEeccCC--chhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEEEEee
Q 005257          368 EENVIGVG--GNGKVYKGVLEGGGAEIAVKRISHEN--DGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDY  443 (705)
Q Consensus       368 ~~~~LG~G--~fg~Vy~~~~~~~~~~vavK~i~~~~--~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~lV~E~  443 (705)
                      ..++||+|  +|++||++..+.+++.||+|++....  ....+.+.+|+++++.++||||+++++++.. ++..++||||
T Consensus         2 ~~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~-~~~~~lv~e~   80 (327)
T cd08227           2 LLTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACTNEMVTFLQGELHVSKLFNHPNIVPYRATFIA-DNELWVVTSF   80 (327)
T ss_pred             hhhhccccccceEEEEEEeecccCcEEEEEEechhhccHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEE-CCEEEEEEec
Confidence            35679999  78999999999999999999997553  2334567789999999999999999999876 6789999999


Q ss_pred             CCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecCC-CC
Q 005257          444 MENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGH-GQ  522 (705)
Q Consensus       444 ~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~~-~~  522 (705)
                      +++|+|.+++...... .+++..+..++.|++.||.|||+   .+|+||||||+|||++.++.++++||+.+..... +.
T Consensus        81 ~~~~~l~~~~~~~~~~-~l~~~~~~~i~~qi~~~L~~LH~---~~iiH~dlkp~Nil~~~~~~~~l~~~~~~~~~~~~~~  156 (327)
T cd08227          81 MAYGSAKDLICTHFMD-GMSELAIAYILQGVLKALDYIHH---MGYVHRSVKASHILISVDGKVYLSGLRSNLSMINHGQ  156 (327)
T ss_pred             cCCCcHHHHHHhhccC-CCCHHHHHHHHHHHHHHHHHHHH---CCEecCCCChhhEEEecCCcEEEcccchhhccccccc
Confidence            9999999999654322 58999999999999999999998   9999999999999999999999999986543221 11


Q ss_pred             cc-----eeeeeeccccCCCcccccc--CCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhHHHHH
Q 005257          523 VA-----STTRVVGTVGYLAPEVFSS--GRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDA  595 (705)
Q Consensus       523 ~~-----~~~~~~gt~~y~APE~~~~--~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~  595 (705)
                      ..     ......++..|+|||++.+  ..++.++|||||||++|||++|+.||......  ...... ..+.....++.
T Consensus       157 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~--~~~~~~-~~~~~~~~~~~  233 (327)
T cd08227         157 RLRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPAT--QMLLEK-LNGTVPCLLDT  233 (327)
T ss_pred             cccccccccccccceecccChHHhhcccCCCCchhhHHHHHHHHHHHHHCCCCCCCcchh--HHHHHH-hcCCccccccc
Confidence            00     0111356778999999876  45899999999999999999999999753221  111111 11111110000


Q ss_pred             h------hh----------------------------cCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 005257          596 R------LR----------------------------AKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKV  635 (705)
Q Consensus       596 ~------l~----------------------------~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  635 (705)
                      .      +.                            ............+.+++..||+.||++|||+.|++++
T Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~ell~~  307 (327)
T cd08227         234 TTIPAEELTMKPSRSGANSGLGESTTVSTPRPSNGESSSHPYNRTFSPHFHHFVEQCLQRNPDARPSASTLLNH  307 (327)
T ss_pred             cchhhhhcccCCcccCCcCCCCcccccCCcCccccCCcccccccccCHHHHHHHHHHHhhCchhcCCHHHHhcC
Confidence            0      00                            0000111234578899999999999999999999874

Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype

>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

Probab=100.00  E-value=2.2e-35  Score=310.87  Aligned_cols=245  Identities=27%  Similarity=0.343  Sum_probs=203.0

Q ss_pred             CCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCC---chhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEEE
Q 005257          364 KGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHEN---DGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLV  440 (705)
Q Consensus       364 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~---~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~lV  440 (705)
                      ++|+..+.||+|++|.||++.+..+++.+|+|.+....   ....+.+.+|++++++++||||+++++.+.. ++.+++|
T Consensus         1 ~~y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~~v   79 (290)
T cd05580           1 DDFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQD-DSNLYLV   79 (290)
T ss_pred             CceEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEEEc-CCeEEEE
Confidence            46888999999999999999999889999999986532   2345678899999999999999999998876 6788999


Q ss_pred             EeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecCC
Q 005257          441 YDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGH  520 (705)
Q Consensus       441 ~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~~  520 (705)
                      |||+++++|.+++....   .+++..+..++.|++.||.|||+   .+++|+||+|+||+++.++.+||+|||+++....
T Consensus        80 ~e~~~~~~L~~~~~~~~---~l~~~~~~~~~~qil~~l~~lH~---~~i~H~dl~p~nili~~~~~~kl~dfg~~~~~~~  153 (290)
T cd05580          80 MEYVPGGELFSHLRKSG---RFPEPVARFYAAQVVLALEYLHS---LDIVYRDLKPENLLLDSDGYIKITDFGFAKRVKG  153 (290)
T ss_pred             EecCCCCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHH---CCEecCCCCHHHEEECCCCCEEEeeCCCccccCC
Confidence            99999999999997643   68999999999999999999998   9999999999999999999999999999987654


Q ss_pred             CCcceeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhHHHHHhhhcC
Q 005257          521 GQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRAK  600 (705)
Q Consensus       521 ~~~~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~l~~~  600 (705)
                      .    .....|++.|+|||.+.+...+.++||||||+++|||++|+.||.....   .........+.            
T Consensus       154 ~----~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~---~~~~~~~~~~~------------  214 (290)
T cd05580         154 R----TYTLCGTPEYLAPEIILSKGYGKAVDWWALGILIYEMLAGYPPFFDDNP---IQIYEKILEGK------------  214 (290)
T ss_pred             C----CCCCCCCccccChhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCH---HHHHHHHhcCC------------
Confidence            3    2234688999999999888889999999999999999999999976542   11112221111            


Q ss_pred             CCCCHHHHHHHHHHHHHcCCCCCCCCC-----CHHHHHH
Q 005257          601 GGFDEDEVERVLHLGLLCAYPDPRARP-----TMRQVVK  634 (705)
Q Consensus       601 ~~~~~~~~~~l~~l~~~Cl~~dP~~RP-----s~~evl~  634 (705)
                      ...+......+.+++..||..||.+||     +++++++
T Consensus       215 ~~~~~~~~~~l~~li~~~l~~~p~~R~~~~~~~~~~l~~  253 (290)
T cd05580         215 VRFPSFFSPDAKDLIRNLLQVDLTKRLGNLKNGVNDIKN  253 (290)
T ss_pred             ccCCccCCHHHHHHHHHHccCCHHHccCcccCCHHHHHc
Confidence            112223346778899999999999999     6666655

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi

>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

Probab=100.00  E-value=1.5e-35  Score=305.55  Aligned_cols=247  Identities=31%  Similarity=0.481  Sum_probs=199.6

Q ss_pred             CCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCCchhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEEEEee
Q 005257          364 KGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDY  443 (705)
Q Consensus       364 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~lV~E~  443 (705)
                      ++|...+.||+|+||.||++..  +++.||+|.++...  ..+.+.+|+.++++++|||++++++++..  +..++||||
T Consensus         6 ~~~~~~~~lg~g~~g~v~~~~~--~~~~~~iK~~~~~~--~~~~~~~e~~~l~~~~~~~i~~~~~~~~~--~~~~~v~e~   79 (254)
T cd05083           6 QKLTLGEIIGEGEFGAVLQGEY--TGQKVAVKNIKCDV--TAQAFLEETAVMTKLHHKNLVRLLGVILH--NGLYIVMEL   79 (254)
T ss_pred             HHceeeeeeccCCCCceEeccc--CCCceEEEeecCcc--hHHHHHHHHHHHHhCCCCCcCeEEEEEcC--CCcEEEEEC
Confidence            3577889999999999999975  46789999986432  34678999999999999999999998864  347899999


Q ss_pred             CCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecCCCCc
Q 005257          444 MENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQV  523 (705)
Q Consensus       444 ~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~~~~~  523 (705)
                      +++++|.+++..... ..+++..+..++.|++.||.|||+   .+++||||||+||+++.++.+||+|||+++.......
T Consensus        80 ~~~~~L~~~l~~~~~-~~~~~~~~~~~~~qi~~al~~lH~---~~~~H~dl~p~nili~~~~~~kl~Dfg~~~~~~~~~~  155 (254)
T cd05083          80 MSKGNLVNFLRTRGR-ALVSVIQLLQFSLDVAEGMEYLES---KKLVHRDLAARNILVSEDGVAKVSDFGLARVGSMGVD  155 (254)
T ss_pred             CCCCCHHHHHHhcCc-CCCCHHHHHHHHHHHHHHHHHHHh---CCeeccccCcceEEEcCCCcEEECCCccceeccccCC
Confidence            999999999976543 268999999999999999999998   9999999999999999999999999999976433211


Q ss_pred             ceeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhh-CCCCCCCCCccHHHHHHHHHHhCchhHHHHHhhhcCCC
Q 005257          524 ASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLS-GRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRAKGG  602 (705)
Q Consensus       524 ~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~Ellt-G~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~l~~~~~  602 (705)
                          ....+..|+|||.+.+..++.++|||||||++|||++ |+.||......   ........+         .+  ..
T Consensus       156 ----~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~---~~~~~~~~~---------~~--~~  217 (254)
T cd05083         156 ----NSKLPVKWTAPEALKHKKFSSKSDVWSYGVLLWEVFSYGRAPYPKMSLK---EVKECVEKG---------YR--ME  217 (254)
T ss_pred             ----CCCCCceecCHHHhccCCcCchhhHHHHHHHHHHHHhCCCCCCccCCHH---HHHHHHhCC---------CC--CC
Confidence                1233567999999988889999999999999999997 99998764421   111222111         11  11


Q ss_pred             CCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHh
Q 005257          603 FDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLEG  638 (705)
Q Consensus       603 ~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  638 (705)
                      ........+.+++.+||+.+|++||++.++++.|+.
T Consensus       218 ~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~  253 (254)
T cd05083         218 PPEGCPADVYVLMTSCWETEPKKRPSFHKLREKLEK  253 (254)
T ss_pred             CCCcCCHHHHHHHHHHcCCChhhCcCHHHHHHHHcc
Confidence            122344678899999999999999999999998864

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki

>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]

Probab=100.00  E-value=2.4e-36  Score=278.32  Aligned_cols=199  Identities=29%  Similarity=0.449  Sum_probs=170.4

Q ss_pred             CCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCC--chhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEEEEe
Q 005257          365 GFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHEN--DGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYD  442 (705)
Q Consensus       365 ~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~--~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~lV~E  442 (705)
                      +|...++||+|.||+||||+..++++.||+|+++...  +.....-++||.+++.++|+|||+++++... +..+-+|+|
T Consensus         3 ~ydkmekigegtygtvfkarn~~t~eivalkrvrlddddegvpssalreicllkelkhknivrl~dvlhs-dkkltlvfe   81 (292)
T KOG0662|consen    3 KYDKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHS-DKKLTLVFE   81 (292)
T ss_pred             chHHHHhhcCCcceeeEecccCCccceEEEEEEeccCCCCCCcHHHHHHHHHHHHhhhcceeehhhhhcc-CceeEEeHH
Confidence            3555678999999999999999999999999987553  3345678999999999999999999998876 678999999


Q ss_pred             eCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecCCCC
Q 005257          443 YMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQ  522 (705)
Q Consensus       443 ~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~~~~  522 (705)
                      ||.. +|.++....++  .+.......++.|+++||.++|+   +++.||||||.|.||+.+|++|++|||++|.++-.-
T Consensus        82 ~cdq-dlkkyfdslng--~~d~~~~rsfmlqllrgl~fchs---hnvlhrdlkpqnllin~ngelkladfglarafgipv  155 (292)
T KOG0662|consen   82 FCDQ-DLKKYFDSLNG--DLDPEIVRSFMLQLLRGLGFCHS---HNVLHRDLKPQNLLINRNGELKLADFGLARAFGIPV  155 (292)
T ss_pred             HhhH-HHHHHHHhcCC--cCCHHHHHHHHHHHHhhhhhhhh---hhhhhccCCcceEEeccCCcEEecccchhhhcCCce
Confidence            9964 89888877655  58899999999999999999999   999999999999999999999999999999876544


Q ss_pred             cceeeeeeccccCCCccccccCC-CCccccEEEEehhHHHHhh-CCCCCCC
Q 005257          523 VASTTRVVGTVGYLAPEVFSSGR-ASTQTDVFGFGILILEVLS-GRRPIEE  571 (705)
Q Consensus       523 ~~~~~~~~gt~~y~APE~~~~~~-~s~ksDVwS~Gvvl~Ellt-G~~Pf~~  571 (705)
                      ..... -+-|.+|++|.++.+.+ |++..|+||-||++.|+.. |++.|++
T Consensus       156 rcysa-evvtlwyrppdvlfgakly~tsidmwsagcifaelanagrplfpg  205 (292)
T KOG0662|consen  156 RCYSA-EVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPG  205 (292)
T ss_pred             Eeeec-eeeeeeccCcceeeeeehhccchHhhhcchHHHHHhhcCCCCCCC
Confidence            33222 35599999999998755 8999999999999999988 5544544

>PHA03211 serine/threonine kinase US3; Provisional

Probab=100.00  E-value=1.4e-35  Score=330.34  Aligned_cols=196  Identities=23%  Similarity=0.294  Sum_probs=169.3

Q ss_pred             hCCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCCchhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEEEEe
Q 005257          363 TKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYD  442 (705)
Q Consensus       363 t~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~lV~E  442 (705)
                      ..+|...+.||+|+||.||++.+..+++.||||...      ...+.+|+++|++|+|+||+++++++.. ++..++|||
T Consensus       168 ~~gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~------~~~~~~E~~iL~~L~HpnIv~l~~~~~~-~~~~~lv~e  240 (461)
T PHA03211        168 GLGFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGW------YASSVHEARLLRRLSHPAVLALLDVRVV-GGLTCLVLP  240 (461)
T ss_pred             cCCeEEEEEEccCCCeEEEEEEECCCCCEEEEeccc------ccCHHHHHHHHHHCCCCCCCcEEEEEEE-CCEEEEEEE
Confidence            457899999999999999999999999999999642      2345789999999999999999998876 678899999


Q ss_pred             eCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecCCCC
Q 005257          443 YMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQ  522 (705)
Q Consensus       443 ~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~~~~  522 (705)
                      ++. ++|..++.....  .+++.+++.++.|++.||.|||+   .+|+||||||+|||++.++.+||+|||+++......
T Consensus       241 ~~~-~~L~~~l~~~~~--~l~~~~~~~i~~qi~~aL~yLH~---~gIvHrDLKP~NILl~~~~~vkL~DFGla~~~~~~~  314 (461)
T PHA03211        241 KYR-SDLYTYLGARLR--PLGLAQVTAVARQLLSAIDYIHG---EGIIHRDIKTENVLVNGPEDICLGDFGAACFARGSW  314 (461)
T ss_pred             ccC-CCHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHH---CCEEECcCCHHHEEECCCCCEEEcccCCceeccccc
Confidence            995 689888865332  69999999999999999999998   999999999999999999999999999998764332


Q ss_pred             cc-eeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhhCCCCCCC
Q 005257          523 VA-STTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEE  571 (705)
Q Consensus       523 ~~-~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~  571 (705)
                      .. ......||+.|+|||++.+..++.++|||||||++|||++|..|+..
T Consensus       315 ~~~~~~~~~GT~~Y~APE~~~~~~~~~~sDvwSlGviL~El~~g~~~lf~  364 (461)
T PHA03211        315 STPFHYGIAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIFEAAVHTASLFS  364 (461)
T ss_pred             ccccccccCCCcCCcCHHHHcCCCCCchHHHHHHHHHHHHHHHcCCCccc
Confidence            21 12235799999999999998999999999999999999998876543

>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase

Probab=100.00  E-value=4.7e-35  Score=308.36  Aligned_cols=264  Identities=24%  Similarity=0.337  Sum_probs=198.6

Q ss_pred             HhCCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCCc-hhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEEE
Q 005257          362 ATKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHEND-GGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLV  440 (705)
Q Consensus       362 at~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~-~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~lV  440 (705)
                      ++++|...+.||+|+||.||+|....++..||+|++..... .....+.+|+.+++.++|+||+++.+++.. +...++|
T Consensus         3 ~~~~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~-~~~~~lv   81 (291)
T cd07870           3 AATSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTEEGVPFTAIREASLLKGLKHANIVLLHDIIHT-KETLTFV   81 (291)
T ss_pred             ccceeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCcCCCcHHHHHHHHHHHhcCCCCEeEEEEEEec-CCeEEEE
Confidence            45789999999999999999999988899999999865533 233467899999999999999999998875 6688999


Q ss_pred             EeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecCC
Q 005257          441 YDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGH  520 (705)
Q Consensus       441 ~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~~  520 (705)
                      +||+. ++|.+++.....  .+++.++..++.|++.||.|||+   .+++|+||||+||+++.++++||+|||+++....
T Consensus        82 ~e~~~-~~l~~~~~~~~~--~~~~~~~~~~~~qi~~~L~~lH~---~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~  155 (291)
T cd07870          82 FEYMH-TDLAQYMIQHPG--GLHPYNVRLFMFQLLRGLAYIHG---QHILHRDLKPQNLLISYLGELKLADFGLARAKSI  155 (291)
T ss_pred             Eeccc-CCHHHHHHhCCC--CCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCChHHEEEcCCCcEEEeccccccccCC
Confidence            99996 678777654332  57888999999999999999998   8999999999999999999999999999975433


Q ss_pred             CCcceeeeeeccccCCCccccccC-CCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHh-CchhHHHHHhhh
Q 005257          521 GQVASTTRVVGTVGYLAPEVFSSG-RASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQ-GKLLDALDARLR  598 (705)
Q Consensus       521 ~~~~~~~~~~gt~~y~APE~~~~~-~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~-~~~~~~id~~l~  598 (705)
                      .... .....+++.|+|||++.+. .++.++|||||||++|||++|+.||...... .+...+.+.. +.......+.+.
T Consensus       156 ~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~f~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~  233 (291)
T cd07870         156 PSQT-YSSEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGVSDV-FEQLEKIWTVLGVPTEDTWPGVS  233 (291)
T ss_pred             CCCC-CCCccccccccCCceeecCCCCCcHHHHHHHHHHHHHHHhCCCCCCCchhH-HHHHHHHHHHcCCCChhhhhhhh
Confidence            2211 1223578899999998754 5788999999999999999999999764431 1111111110 000000000000


Q ss_pred             cC-------------CCC-----CHHHHHHHHHHHHHcCCCCCCCCCCHHHHHH
Q 005257          599 AK-------------GGF-----DEDEVERVLHLGLLCAYPDPRARPTMRQVVK  634 (705)
Q Consensus       599 ~~-------------~~~-----~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~  634 (705)
                      ..             ...     .......+.+++.+|+..||.+|||+.|++.
T Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~~~l~  287 (291)
T cd07870         234 KLPNYKPEWFLPCKPQQLRVVWKRLSRPPKAEDLASQMLMMFPKDRISAQDALL  287 (291)
T ss_pred             hcccccchhccccCCcchhhhccccCCChHHHHHHHHHhCcCcccCcCHHHHhc
Confidence            00             000     0011356778999999999999999999875

Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess

>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

Probab=100.00  E-value=4.2e-35  Score=307.20  Aligned_cols=262  Identities=22%  Similarity=0.314  Sum_probs=203.2

Q ss_pred             CCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCC--chhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEEEEe
Q 005257          365 GFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHEN--DGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYD  442 (705)
Q Consensus       365 ~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~--~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~lV~E  442 (705)
                      +|+..+.||+|++|.||+|.+..++..||+|++....  ....+.+.+|+.++++++||||+++++++.. ....++|||
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~-~~~~~~v~e   79 (286)
T cd07832           1 RYKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQHPYVVKLLDVFPH-GSGFVLVME   79 (286)
T ss_pred             CceEEeecccCCCcEEEEEEECCCCceEEEEEEEcccccchhhHHHHHHHHHHHhCCCCCCcceeeEEec-CCeeEEEec
Confidence            4778899999999999999998889999999987654  3345679999999999999999999998876 678899999


Q ss_pred             eCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecCCCC
Q 005257          443 YMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQ  522 (705)
Q Consensus       443 ~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~~~~  522 (705)
                      |+ +++|.+++....  ..+++.+++.++.|++.||.|||+   .+++|+||||+||+++.++.++|+|||++.......
T Consensus        80 ~~-~~~L~~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dl~p~ni~~~~~~~~~l~dfg~~~~~~~~~  153 (286)
T cd07832          80 YM-PSDLSEVLRDEE--RPLPEAQVKSYMRMLLKGVAYMHA---NGIMHRDLKPANLLISADGVLKIADFGLARLFSEEE  153 (286)
T ss_pred             cc-CCCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCcCHHHEEEcCCCcEEEeeeeecccccCCC
Confidence            99 999999987544  368999999999999999999998   999999999999999999999999999998765443


Q ss_pred             cceeeeeeccccCCCccccccC-CCCccccEEEEehhHHHHhhCCCCCCCCCcc-HHHHHHHHHHhCchhHHHHHhh---
Q 005257          523 VASTTRVVGTVGYLAPEVFSSG-RASTQTDVFGFGILILEVLSGRRPIEEGKPN-LVEMVWELMVQGKLLDALDARL---  597 (705)
Q Consensus       523 ~~~~~~~~gt~~y~APE~~~~~-~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~-~~~~v~~~~~~~~~~~~id~~l---  597 (705)
                      ........|+..|+|||.+.+. .++.++||||+||+++||++|+.||...... ....+.......  .....+..   
T Consensus       154 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~  231 (286)
T cd07832         154 PRLYSHQVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPGENDIEQLAIVFRTLGTP--NEETWPGLTSL  231 (286)
T ss_pred             CCccccccCcccccCceeeeccccCCchhHHHHHHHHHHHHHcCCcCcCCCCHHHHHHHHHHHcCCC--ChHHHhhccCc
Confidence            2223335789999999998654 4689999999999999999998777653321 111111111000  00000000   


Q ss_pred             --------hcCC-----CCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 005257          598 --------RAKG-----GFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKV  635 (705)
Q Consensus       598 --------~~~~-----~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  635 (705)
                              ....     ....+....+.+++.+|++.+|++||++++++++
T Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~h  282 (286)
T cd07832         232 PDYNKITFPESKPIPLEEIFPDASPEALDLLKGLLVYDPSKRLSAAEALRH  282 (286)
T ss_pred             chhhcccCCCCCcchHHHhCCCccHHHHHHHHHHhccChhhCCCHHHHhhC
Confidence                    0000     0001223678899999999999999999999874

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea

>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

Probab=100.00  E-value=1.6e-35  Score=310.54  Aligned_cols=262  Identities=25%  Similarity=0.380  Sum_probs=201.3

Q ss_pred             CCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCCc--hhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEEEE
Q 005257          364 KGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHEND--GGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVY  441 (705)
Q Consensus       364 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~--~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~lV~  441 (705)
                      ++|+..+.||+|+||.||+|.+..+++.||+|++.....  ...+.+.+|+++++.++||||+++++++.. ++..++|+
T Consensus         1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~lv~   79 (286)
T cd07846           1 EKYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLVNLIEVFRR-KKRLYLVF   79 (286)
T ss_pred             CceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcchhhHHHHHHHHHHHhcCCcchhhHHHhccc-CCeEEEEE
Confidence            467888999999999999999988899999998865422  235678899999999999999999999875 67899999


Q ss_pred             eeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecCCC
Q 005257          442 DYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHG  521 (705)
Q Consensus       442 E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~~~  521 (705)
                      ||+++++|..+.....   .+++.++..++.|++.||.|||+   .+++|+||+|+||++++++.++|+|||++......
T Consensus        80 e~~~~~~l~~~~~~~~---~~~~~~~~~~~~~i~~~l~~LH~---~~i~h~~l~p~ni~~~~~~~~~l~dfg~~~~~~~~  153 (286)
T cd07846          80 EFVDHTVLDDLEKYPN---GLDESRVRKYLFQILRGIEFCHS---HNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAP  153 (286)
T ss_pred             ecCCccHHHHHHhccC---CCCHHHHHHHHHHHHHHHHHHHH---CCccccCCCHHHEEECCCCcEEEEeeeeeeeccCC
Confidence            9999999988765432   48999999999999999999998   89999999999999999999999999999876443


Q ss_pred             CcceeeeeeccccCCCcccccc-CCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHH-hCchhHHHHHh---
Q 005257          522 QVASTTRVVGTVGYLAPEVFSS-GRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMV-QGKLLDALDAR---  596 (705)
Q Consensus       522 ~~~~~~~~~gt~~y~APE~~~~-~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~-~~~~~~~id~~---  596 (705)
                      .. ......++..|+|||++.+ ..++.++|||||||++|||++|+.||.....  .+....... .+.+.......   
T Consensus       154 ~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~  230 (286)
T cd07846         154 GE-VYTDYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSD--IDQLYHIIKCLGNLIPRHQEIFQK  230 (286)
T ss_pred             cc-ccCcccceeeccCcHHhccccccCchHhHHHHHHHHHHHHcCCCCCCCCch--HHHHHHHHHHhCCCchhhHHHhcc
Confidence            32 2233467899999999865 4578899999999999999999999875432  111111110 01110000000   


Q ss_pred             ------hhc--CC------CCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 005257          597 ------LRA--KG------GFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKV  635 (705)
Q Consensus       597 ------l~~--~~------~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  635 (705)
                            ...  ..      ...+.....+.+++..||+.+|++||++.++++.
T Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~  283 (286)
T cd07846         231 NPLFAGMRLPEVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLHH  283 (286)
T ss_pred             chHhhccccccccCcchHHHhCCCcCHHHHHHHHHHhcCCcccchhHHHHhcC
Confidence                  000  00      0011234568899999999999999999998763

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI

>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

Probab=100.00  E-value=5e-35  Score=303.69  Aligned_cols=252  Identities=23%  Similarity=0.371  Sum_probs=199.8

Q ss_pred             CCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCC-----chhHHHHHHHHHHhccCCCCCcceeeeeeeec-cCce
Q 005257          364 KGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHEN-----DGGTRAFLAEISSLGRLKHKSLVGLRGWCKRE-KGSL  437 (705)
Q Consensus       364 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~-----~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~-~~~~  437 (705)
                      ++|...+.||+|+||.||+|....++..||||.+....     ....+.+.+|+.++++++||||+++++++.+. ...+
T Consensus         2 ~~~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~   81 (265)
T cd06652           2 TNWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDPMERTL   81 (265)
T ss_pred             CcceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccCCCceE
Confidence            46888999999999999999999999999999885431     22356788999999999999999999977543 3467


Q ss_pred             EEEEeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeecccee
Q 005257          438 MLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARM  517 (705)
Q Consensus       438 ~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~  517 (705)
                      +++|||+++++|.+++.+..   .+++..+.+++.|++.||.|||+   .+++|+||||+||+++.++.+||+|||+++.
T Consensus        82 ~~v~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~~l~~~l~~lH~---~~i~H~dl~p~nil~~~~~~~~l~Dfg~~~~  155 (265)
T cd06652          82 SIFMEHMPGGSIKDQLKSYG---ALTENVTRKYTRQILEGVSYLHS---NMIVHRDIKGANILRDSVGNVKLGDFGASKR  155 (265)
T ss_pred             EEEEEecCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHh---CCEecCCCCHHHEEecCCCCEEECcCccccc
Confidence            89999999999999987543   57889999999999999999998   9999999999999999999999999999876


Q ss_pred             cCCCCc--ceeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhHHHHH
Q 005257          518 HGHGQV--ASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDA  595 (705)
Q Consensus       518 ~~~~~~--~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~  595 (705)
                      ......  .......|+..|+|||.+.+..++.++|||||||++|||++|+.||......  ..........        
T Consensus       156 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~--~~~~~~~~~~--------  225 (265)
T cd06652         156 LQTICLSGTGMKSVTGTPYWMSPEVISGEGYGRKADIWSVGCTVVEMLTEKPPWAEFEAM--AAIFKIATQP--------  225 (265)
T ss_pred             cccccccccccccCCCCccccChhhhcCCCCCcchhHHHHHHHHHHHhhCCCCCCccchH--HHHHHHhcCC--------
Confidence            532211  1122346889999999998888999999999999999999999999754211  1111111000        


Q ss_pred             hhhcCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 005257          596 RLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKV  635 (705)
Q Consensus       596 ~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  635 (705)
                         .....+......+..++..|+. +|++||++.+++++
T Consensus       226 ---~~~~~~~~~~~~~~~~i~~~l~-~p~~Rp~~~~il~~  261 (265)
T cd06652         226 ---TNPVLPPHVSDHCRDFLKRIFV-EAKLRPSADELLRH  261 (265)
T ss_pred             ---CCCCCchhhCHHHHHHHHHHhc-ChhhCCCHHHHhcC
Confidence               0122233445567788888884 99999999998864

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re

>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

Probab=100.00  E-value=2.5e-35  Score=312.91  Aligned_cols=256  Identities=22%  Similarity=0.288  Sum_probs=203.8

Q ss_pred             CCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCC---chhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEEE
Q 005257          364 KGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHEN---DGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLV  440 (705)
Q Consensus       364 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~---~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~lV  440 (705)
                      ++|+..+.||+|+||.||++.+..+++.||+|.+....   ....+.+.+|+++++.++||||+++++.+.. ++.+++|
T Consensus         1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~-~~~~~lv   79 (305)
T cd05609           1 EDFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSFET-KRHLCMV   79 (305)
T ss_pred             CCceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEec-CCEEEEE
Confidence            36888999999999999999999999999999986543   2345678899999999999999999998875 6688999


Q ss_pred             EeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecCC
Q 005257          441 YDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGH  520 (705)
Q Consensus       441 ~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~~  520 (705)
                      |||+++++|.+++....   .+++..+..++.|++.||.|||+   .+++||||||+||+++.++.+||+|||+++....
T Consensus        80 ~e~~~g~~L~~~l~~~~---~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dl~p~NIll~~~~~~~l~dfg~~~~~~~  153 (305)
T cd05609          80 MEYVEGGDCATLLKNIG---ALPVDMARMYFAETVLALEYLHN---YGIVHRDLKPDNLLITSMGHIKLTDFGLSKIGLM  153 (305)
T ss_pred             EecCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHH---CCccccCCchHHEEECCCCCEEEeeCCCccccCc
Confidence            99999999999996543   68999999999999999999998   9999999999999999999999999999874211


Q ss_pred             CCc--------------ceeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHh
Q 005257          521 GQV--------------ASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQ  586 (705)
Q Consensus       521 ~~~--------------~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~  586 (705)
                      ...              .......|+..|+|||.+....++.++|||||||++|||++|+.||.+....   .+......
T Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~pf~~~~~~---~~~~~~~~  230 (305)
T cd05609         154 SLTTNLYEGHIEKDTREFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPE---ELFGQVIS  230 (305)
T ss_pred             CccccccccccccchhhccccCCccCccccCchhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH---HHHHHHHh
Confidence            100              0111245788999999998888999999999999999999999999754321   11121111


Q ss_pred             CchhHHHHHhhhcCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHh
Q 005257          587 GKLLDALDARLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLEG  638 (705)
Q Consensus       587 ~~~~~~id~~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  638 (705)
                      +....         ..........+.+++.+||+.+|++||++.++.+.|+.
T Consensus       231 ~~~~~---------~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~ll~~  273 (305)
T cd05609         231 DDIEW---------PEGDEALPADAQDLISRLLRQNPLERLGTGGAFEVKQH  273 (305)
T ss_pred             cccCC---------CCccccCCHHHHHHHHHHhccChhhccCccCHHHHHhC
Confidence            11100         00111234567899999999999999998777777764

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a

>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

Probab=100.00  E-value=1.2e-35  Score=313.63  Aligned_cols=246  Identities=24%  Similarity=0.372  Sum_probs=199.9

Q ss_pred             ceEEeecCceEEEEEEEcCCCeEEEEEEeccCCchhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEEEEeeCCCCC
Q 005257          369 ENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGS  448 (705)
Q Consensus       369 ~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~lV~E~~~~gs  448 (705)
                      ...||+|+||.||++....++..||||++........+.+.+|+.+++.++||||+++++.+.. .+..++||||+++++
T Consensus        27 ~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~-~~~~~lv~e~~~~~~  105 (292)
T cd06658          27 FIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHENVVDMYNSYLV-GDELWVVMEFLEGGA  105 (292)
T ss_pred             hhcccCCCCeEEEEEEECCCCCEEEEEEEecchHHHHHHHHHHHHHHHhCCCCcHHHHHHheec-CCeEEEEEeCCCCCc
Confidence            4569999999999999988899999999876555566778999999999999999999998876 678899999999999


Q ss_pred             hhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecCCCCcceeee
Q 005257          449 LDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTR  528 (705)
Q Consensus       449 L~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~~~~~~~~~~  528 (705)
                      |.+++..    ..+++.++..++.|++.||.|||+   .+++||||||+||+++.++.+||+|||++........ ....
T Consensus       106 L~~~~~~----~~l~~~~~~~~~~qi~~~l~~LH~---~~ivH~dlkp~Nill~~~~~~kL~dfg~~~~~~~~~~-~~~~  177 (292)
T cd06658         106 LTDIVTH----TRMNEEQIATVCLSVLRALSYLHN---QGVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVP-KRKS  177 (292)
T ss_pred             HHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHH---CCEeecCCCHHHEEEcCCCCEEEccCcchhhcccccc-cCce
Confidence            9998843    258899999999999999999998   8999999999999999999999999999876543322 2233


Q ss_pred             eeccccCCCccccccCCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhHHHHHhhhcCCCCCHHHH
Q 005257          529 VVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRAKGGFDEDEV  608 (705)
Q Consensus       529 ~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~l~~~~~~~~~~~  608 (705)
                      ..|+..|+|||.+.+..++.++||||||+++|||++|+.||......  ..+ ..+..     .+...+.    ......
T Consensus       178 ~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~--~~~-~~~~~-----~~~~~~~----~~~~~~  245 (292)
T cd06658         178 LVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPL--QAM-RRIRD-----NLPPRVK----DSHKVS  245 (292)
T ss_pred             eecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH--HHH-HHHHh-----cCCCccc----cccccC
Confidence            57899999999998888999999999999999999999999764321  111 11100     0111111    111233


Q ss_pred             HHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 005257          609 ERVLHLGLLCAYPDPRARPTMRQVVKV  635 (705)
Q Consensus       609 ~~l~~l~~~Cl~~dP~~RPs~~evl~~  635 (705)
                      ..+..++..||..||++|||+.++++.
T Consensus       246 ~~~~~li~~~l~~~P~~Rpt~~~il~~  272 (292)
T cd06658         246 SVLRGFLDLMLVREPSQRATAQELLQH  272 (292)
T ss_pred             HHHHHHHHHHccCChhHCcCHHHHhhC
Confidence            467788999999999999999999975

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express

>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

Probab=100.00  E-value=1.9e-35  Score=309.85  Aligned_cols=262  Identities=25%  Similarity=0.348  Sum_probs=197.7

Q ss_pred             CCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCC--chhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEEEEe
Q 005257          365 GFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHEN--DGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYD  442 (705)
Q Consensus       365 ~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~--~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~lV~E  442 (705)
                      +|...+.||+|+||.||+|.+..+|+.+|+|+++...  ......+.+|++++++++||||+++++++.. ....++|+|
T Consensus         1 ~y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~-~~~~~lv~e   79 (284)
T cd07839           1 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLYDVLHS-DKKLTLVFE   79 (284)
T ss_pred             CceeEEEecccCCeEEEEEEECCCCcEEEEEEeecccccccCccchhHHHHHHHhcCCCCeeeHHHHhcc-CCceEEEEe
Confidence            4777899999999999999999899999999986542  2234567889999999999999999998876 678999999


Q ss_pred             eCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecCCCC
Q 005257          443 YMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQ  522 (705)
Q Consensus       443 ~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~~~~  522 (705)
                      |++ ++|.+++.....  .+++..+..++.||++||.|||+   ++++||||||+||+++.++++||+|||+++......
T Consensus        80 ~~~-~~l~~~~~~~~~--~~~~~~~~~~~~qi~~al~~LH~---~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~  153 (284)
T cd07839          80 YCD-QDLKKYFDSCNG--DIDPEIVKSFMFQLLKGLAFCHS---HNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPV  153 (284)
T ss_pred             cCC-CCHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHH---CCEecCCCCHHHEEEcCCCcEEECccchhhccCCCC
Confidence            997 588888765432  58999999999999999999998   999999999999999999999999999998654332


Q ss_pred             cceeeeeeccccCCCccccccC-CCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHh-Cchh-H---HHHH-
Q 005257          523 VASTTRVVGTVGYLAPEVFSSG-RASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQ-GKLL-D---ALDA-  595 (705)
Q Consensus       523 ~~~~~~~~gt~~y~APE~~~~~-~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~-~~~~-~---~id~-  595 (705)
                      .. .....++..|+|||++.+. .++.++|||||||++|||++|+.|+..+... .+........ +... .   .+.. 
T Consensus       154 ~~-~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~  231 (284)
T cd07839         154 RC-YSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDV-DDQLKRIFRLLGTPTEESWPGVSKL  231 (284)
T ss_pred             CC-cCCCccccCCcChHHHhCCcccCcHHHHHHHHHHHHHHHhcCCCCcCCCCH-HHHHHHHHHHhCCCChHHhHHhhhc
Confidence            21 1224578899999998764 4789999999999999999999987543321 1111111100 0000 0   0000 


Q ss_pred             -hhhcCCC---------CCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 005257          596 -RLRAKGG---------FDEDEVERVLHLGLLCAYPDPRARPTMRQVVKV  635 (705)
Q Consensus       596 -~l~~~~~---------~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  635 (705)
                       .......         ........+.+++..||+.||.+|||+.+++++
T Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~il~h  281 (284)
T cd07839         232 PDYKPYPMYPATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQH  281 (284)
T ss_pred             ccccccCCCCCcchhhhhcccCCHHHHHHHHHHhcCChhhcCCHHHHhcC
Confidence             0000000         011223567889999999999999999998763

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also

>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=2.5e-35  Score=306.47  Aligned_cols=257  Identities=26%  Similarity=0.383  Sum_probs=203.4

Q ss_pred             HHhCCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCCchhHHHHHHHHHHhccC-CCCCcceeeeeeeec-----c
Q 005257          361 AATKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRL-KHKSLVGLRGWCKRE-----K  434 (705)
Q Consensus       361 ~at~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~~~~~~~~~Ei~~l~~l-~Hpniv~l~g~~~~~-----~  434 (705)
                      .++++|+..+.||+|++|.||+|..+.+++.+++|.+..... ..+.+.+|+.+++++ +|+||+++++++...     .
T Consensus         3 ~~~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~   81 (275)
T cd06608           3 DPTGIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIED-EEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPGND   81 (275)
T ss_pred             CchhheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCch-hHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCCcc
Confidence            356889999999999999999999988889999999865443 446789999999999 699999999988642     2


Q ss_pred             CceEEEEeeCCCCChhHHHHhcC-CCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeec
Q 005257          435 GSLMLVYDYMENGSLDKWIFQCD-GSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFG  513 (705)
Q Consensus       435 ~~~~lV~E~~~~gsL~~~L~~~~-~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFG  513 (705)
                      ..+++||||+++++|.+++.... ....+++..+..++.|++.||.|||+   .+++|+||+|+||++++++.+||+|||
T Consensus        82 ~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~---~~i~H~~l~p~ni~~~~~~~~~l~d~~  158 (275)
T cd06608          82 DQLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHE---NKVIHRDIKGQNILLTKNAEVKLVDFG  158 (275)
T ss_pred             eEEEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhc---CCcccCCCCHHHEEEccCCeEEECCCc
Confidence            34799999999999999986532 22368999999999999999999998   999999999999999999999999999


Q ss_pred             cceecCCCCcceeeeeeccccCCCcccccc-----CCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCc
Q 005257          514 LARMHGHGQVASTTRVVGTVGYLAPEVFSS-----GRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGK  588 (705)
Q Consensus       514 la~~~~~~~~~~~~~~~gt~~y~APE~~~~-----~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~  588 (705)
                      ++........ ......|+..|+|||.+..     ..++.++|||||||+++||++|+.||......  ..... +..+ 
T Consensus       159 ~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~--~~~~~-~~~~-  233 (275)
T cd06608         159 VSAQLDSTLG-RRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLCDMHPM--RALFK-IPRN-  233 (275)
T ss_pred             cceecccchh-hhcCccccccccCHhHhcccccccCCccccccHHHhHHHHHHHHhCCCCccccchH--HHHHH-hhcc-
Confidence            9876543222 2223568899999998753     34678999999999999999999999753321  11111 1111 


Q ss_pred             hhHHHHHhhhcCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHH
Q 005257          589 LLDALDARLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVK  634 (705)
Q Consensus       589 ~~~~id~~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~  634 (705)
                              .......+....+.+.+++.+||..||++|||+.++++
T Consensus       234 --------~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~ll~  271 (275)
T cd06608         234 --------PPPTLKSPENWSKKFNDFISECLIKNYEQRPFMEELLE  271 (275)
T ss_pred             --------CCCCCCchhhcCHHHHHHHHHHhhcChhhCcCHHHHhc
Confidence                    00001112224567889999999999999999999986

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I

>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6

Probab=100.00  E-value=4.9e-35  Score=311.91  Aligned_cols=198  Identities=27%  Similarity=0.374  Sum_probs=162.3

Q ss_pred             ceEEeecCceEEEEEEEcC--CCeEEEEEEeccCCchhHHHHHHHHHHhccCCCCCcceeeeeeee-ccCceEEEEeeCC
Q 005257          369 ENVIGVGGNGKVYKGVLEG--GGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKR-EKGSLMLVYDYME  445 (705)
Q Consensus       369 ~~~LG~G~fg~Vy~~~~~~--~~~~vavK~i~~~~~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~-~~~~~~lV~E~~~  445 (705)
                      ..+||+|+||.||+|....  ++..||+|.+....  ....+.+|++++++++||||+++++++.. .+...++|+||++
T Consensus         6 g~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~   83 (317)
T cd07867           6 GCKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTG--ISMSACREIALLRELKHPNVIALQKVFLSHSDRKVWLLFDYAE   83 (317)
T ss_pred             ceEeccCCCeeEEEEEecCCCccceEEEEEecCCC--CcHHHHHHHHHHHhCCCCCeeeEEEEEeccCCCeEEEEEeeeC
Confidence            4689999999999999764  45789999886442  23567889999999999999999998753 3457899999997


Q ss_pred             CCChhHHHHhcC------CCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEE----ccCCCeeeeeeccc
Q 005257          446 NGSLDKWIFQCD------GSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLL----DKEMNGRLGDFGLA  515 (705)
Q Consensus       446 ~gsL~~~L~~~~------~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILl----d~~~~~kL~DFGla  515 (705)
                      + +|.+++....      ....+++..+..++.|++.||.|||+   .+|+||||||+|||+    +.++.+||+|||++
T Consensus        84 ~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~---~~ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG~a  159 (317)
T cd07867          84 H-DLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHA---NWVLHRDLKPANILVMGEGPERGRVKIADMGFA  159 (317)
T ss_pred             C-cHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHh---CCEEcCCCCHHHEEEccCCCCCCcEEEeeccce
Confidence            5 7777775321      12358899999999999999999998   999999999999999    56678999999999


Q ss_pred             eecCCCCcc--eeeeeeccccCCCcccccc-CCCCccccEEEEehhHHHHhhCCCCCCCC
Q 005257          516 RMHGHGQVA--STTRVVGTVGYLAPEVFSS-GRASTQTDVFGFGILILEVLSGRRPIEEG  572 (705)
Q Consensus       516 ~~~~~~~~~--~~~~~~gt~~y~APE~~~~-~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~  572 (705)
                      +........  ......||+.|+|||++.+ ..++.++|||||||++|||+||+.||...
T Consensus       160 ~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~el~tg~~~f~~~  219 (317)
T cd07867         160 RLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCR  219 (317)
T ss_pred             eccCCCcccccccCcceecccccCcHHhcCCCccCcHHHHHhHHHHHHHHHhCCCCcccc
Confidence            876543221  2234578999999999876 45899999999999999999999999653

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as

>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=3.1e-35  Score=313.54  Aligned_cols=253  Identities=26%  Similarity=0.330  Sum_probs=202.9

Q ss_pred             CCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCCc---hhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEEE
Q 005257          364 KGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHEND---GGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLV  440 (705)
Q Consensus       364 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~---~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~lV  440 (705)
                      ++|+..+.||+|++|.||+|....+++.+|+|.+.....   ...+.+.+|++++..++||||+++++.+.. ....++|
T Consensus         1 ~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~~lv   79 (316)
T cd05574           1 KHFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASFQT-ETYLCLV   79 (316)
T ss_pred             CceEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeeeec-CCEEEEE
Confidence            368888999999999999999998899999999876532   245678999999999999999999998875 6688999


Q ss_pred             EeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecCC
Q 005257          441 YDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGH  520 (705)
Q Consensus       441 ~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~~  520 (705)
                      |||+.+++|.+++..... ..+++..+..++.|++.||+|||+   .+++|+||||+||+++.++.++|+|||++.....
T Consensus        80 ~e~~~~~~L~~~~~~~~~-~~l~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~  155 (316)
T cd05574          80 MDYCPGGELFRLLQRQPG-KCLSEEVARFYAAEVLLALEYLHL---LGIVYRDLKPENILLHESGHIMLSDFDLSKQSDV  155 (316)
T ss_pred             EEecCCCCHHHHHHhCCC-CccCHHHHHHHHHHHHHHHHHHHH---CCeeccCCChHHeEEcCCCCEEEeecchhhcccc
Confidence            999999999999875432 368999999999999999999998   9999999999999999999999999999875432


Q ss_pred             CCcc----------------------------eeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhhCCCCCCCC
Q 005257          521 GQVA----------------------------STTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEG  572 (705)
Q Consensus       521 ~~~~----------------------------~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~  572 (705)
                      ....                            ......|+..|+|||++.+..++.++||||||+++|||++|+.||...
T Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~  235 (316)
T cd05574         156 EPPPVSKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWTLGILLYEMLYGTTPFKGS  235 (316)
T ss_pred             cccccccccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHcCCCCCchHHHHHHHHHHHHHhhCCCCCCCC
Confidence            2110                            111246889999999998888999999999999999999999999754


Q ss_pred             CccHHHHHHHHHHhCchhHHHHHhhhcCCCCCHHHHHHHHHHHHHcCCCCCCCCCC----HHHHHH
Q 005257          573 KPNLVEMVWELMVQGKLLDALDARLRAKGGFDEDEVERVLHLGLLCAYPDPRARPT----MRQVVK  634 (705)
Q Consensus       573 ~~~~~~~v~~~~~~~~~~~~id~~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs----~~evl~  634 (705)
                      ...  ... ..        .......  ..........+.+++.+||+.||++||+    +.|+++
T Consensus       236 ~~~--~~~-~~--------~~~~~~~--~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~ll~  288 (316)
T cd05574         236 NRD--ETF-SN--------ILKKEVT--FPGSPPVSSSARDLIRKLLVKDPSKRLGSKRGAAEIKQ  288 (316)
T ss_pred             chH--HHH-HH--------HhcCCcc--CCCccccCHHHHHHHHHHccCCHhHCCCchhhHHHHHc
Confidence            421  111 11        1111111  0011114577899999999999999999    666655

Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin

>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

Probab=100.00  E-value=7.5e-35  Score=306.62  Aligned_cols=262  Identities=26%  Similarity=0.407  Sum_probs=197.9

Q ss_pred             CCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCCc-hhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEEEEe
Q 005257          364 KGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHEND-GGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYD  442 (705)
Q Consensus       364 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~-~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~lV~E  442 (705)
                      ++|+..+.||+|++|.||+|..+.+++.||||.+..... .....+.+|++++++++||||+++++++.. +...++|||
T Consensus         5 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~lv~e   83 (291)
T cd07844           5 ETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEGAPFTAIREASLLKDLKHANIVTLHDIIHT-KKTLTLVFE   83 (291)
T ss_pred             cceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEecccccCCchhHHHHHHHHhhCCCcceeeEEEEEec-CCeEEEEEe
Confidence            568889999999999999999988899999999875432 223457789999999999999999998876 678999999


Q ss_pred             eCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecCCCC
Q 005257          443 YMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQ  522 (705)
Q Consensus       443 ~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~~~~  522 (705)
                      |+++ +|.+++.....  .+++..+..++.|++.||.|||+   .+++||||||+||+++.++.+||+|||+++......
T Consensus        84 ~~~~-~L~~~~~~~~~--~~~~~~~~~~~~ql~~al~~lH~---~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~  157 (291)
T cd07844          84 YLDT-DLKQYMDDCGG--GLSMHNVRLFLFQLLRGLAYCHQ---RRVLHRDLKPQNLLISERGELKLADFGLARAKSVPS  157 (291)
T ss_pred             cCCC-CHHHHHHhCCC--CCCHHHHHHHHHHHHHHHHHHHh---CCeecccCCHHHEEEcCCCCEEECccccccccCCCC
Confidence            9985 99998876443  68999999999999999999998   999999999999999999999999999987543221


Q ss_pred             cceeeeeeccccCCCcccccc-CCCCccccEEEEehhHHHHhhCCCCCCCCCcc--HHHHHHHHHHhCch--hHHHH---
Q 005257          523 VASTTRVVGTVGYLAPEVFSS-GRASTQTDVFGFGILILEVLSGRRPIEEGKPN--LVEMVWELMVQGKL--LDALD---  594 (705)
Q Consensus       523 ~~~~~~~~gt~~y~APE~~~~-~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~--~~~~v~~~~~~~~~--~~~id---  594 (705)
                      .. .....++..|+|||++.+ ..++.++||||+||++|||++|+.||......  .....+..+.....  ...+.   
T Consensus       158 ~~-~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (291)
T cd07844         158 KT-YSNEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGSTDVEDQLHKIFRVLGTPTEETWPGVSSNP  236 (291)
T ss_pred             cc-ccccccccccCCcHHhhcCcccCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHhcCCCChhhhhhhhhcc
Confidence            11 122346889999999865 45889999999999999999999999654321  11111111111000  00000   


Q ss_pred             ------------HhhhcCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHH
Q 005257          595 ------------ARLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVK  634 (705)
Q Consensus       595 ------------~~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~  634 (705)
                                  ..+.. ..........+.+++..|++++|++||++.++++
T Consensus       237 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~~L~~~p~~Rps~~e~l~  287 (291)
T cd07844         237 EFKPYSFPFYPPRPLIN-HAPRLDRIPHGEELALKFLQYEPKKRISAAEAMK  287 (291)
T ss_pred             ccccccccccCChhHHH-hCcCCCCchhHHHHHHHHhccCcccccCHHHHhc
Confidence                        00000 0000011256678999999999999999999875

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the

>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]

Probab=100.00  E-value=5.9e-36  Score=322.89  Aligned_cols=246  Identities=21%  Similarity=0.392  Sum_probs=205.1

Q ss_pred             cceEEeecCceEEEEEEEcCCCeEEEEEEeccC----CchhHHHHHHHHHHhccCCCCCcceeeeeeeec-cCceEEEEe
Q 005257          368 EENVIGVGGNGKVYKGVLEGGGAEIAVKRISHE----NDGGTRAFLAEISSLGRLKHKSLVGLRGWCKRE-KGSLMLVYD  442 (705)
Q Consensus       368 ~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~----~~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~-~~~~~lV~E  442 (705)
                      ...+||+|+|-+||||.+..+|..||.-.++..    .....+.|..|+.+|+.|+||||++++....+. +..+.+|+|
T Consensus        44 ~~evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~n~~in~iTE  123 (632)
T KOG0584|consen   44 FDEVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDTDNKTINFITE  123 (632)
T ss_pred             hhhhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecCCCceeeeeee
Confidence            356799999999999999999999997655432    334568899999999999999999999976543 345789999


Q ss_pred             eCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccC-CCeeeeeeccceecCCC
Q 005257          443 YMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKE-MNGRLGDFGLARMHGHG  521 (705)
Q Consensus       443 ~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~-~~~kL~DFGla~~~~~~  521 (705)
                      .|..|+|..|+++.+   .++.+.+.+|++||++||.|||+ ..++|||||||..||+|+.+ |.+||+|+|||......
T Consensus       124 L~TSGtLr~Y~kk~~---~vn~kaik~W~RQILkGL~yLHs-~~PPIIHRDLKCDNIFinG~~G~VKIGDLGLAtl~r~s  199 (632)
T KOG0584|consen  124 LFTSGTLREYRKKHR---RVNIKAIKSWCRQILKGLVYLHS-QDPPIIHRDLKCDNIFVNGNLGEVKIGDLGLATLLRKS  199 (632)
T ss_pred             cccCCcHHHHHHHhc---cCCHHHHHHHHHHHHHHhhhhhc-CCCCccccccccceEEEcCCcCceeecchhHHHHhhcc
Confidence            999999999998765   58899999999999999999997 46899999999999999875 88999999999887654


Q ss_pred             CcceeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhHHHHHhhhcCC
Q 005257          522 QVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRAKG  601 (705)
Q Consensus       522 ~~~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~l~~~~  601 (705)
                      ..   ..++|||.|||||++. ..|++.+||||||++++||+|+..||..=..  ...++.++..|..+..+.+-     
T Consensus       200 ~a---ksvIGTPEFMAPEmYE-E~YnE~VDVYaFGMCmLEMvT~eYPYsEC~n--~AQIYKKV~SGiKP~sl~kV-----  268 (632)
T KOG0584|consen  200 HA---KSVIGTPEFMAPEMYE-ENYNELVDVYAFGMCMLEMVTSEYPYSECTN--PAQIYKKVTSGIKPAALSKV-----  268 (632)
T ss_pred             cc---ceeccCccccChHHHh-hhcchhhhhhhhhHHHHHHHhccCChhhhCC--HHHHHHHHHcCCCHHHhhcc-----
Confidence            33   3379999999999987 6899999999999999999999999975221  24456666677666654321     


Q ss_pred             CCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHH
Q 005257          602 GFDEDEVERVLHLGLLCAYPDPRARPTMRQVVK  634 (705)
Q Consensus       602 ~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~  634 (705)
                           .-..+.+++..|+.. ..+|||+.|+++
T Consensus       269 -----~dPevr~fIekCl~~-~~~R~sa~eLL~  295 (632)
T KOG0584|consen  269 -----KDPEVREFIEKCLAT-KSERLSAKELLK  295 (632)
T ss_pred             -----CCHHHHHHHHHHhcC-chhccCHHHHhh
Confidence                 124578899999999 999999999987

>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

Probab=100.00  E-value=7.6e-35  Score=306.34  Aligned_cols=260  Identities=27%  Similarity=0.357  Sum_probs=204.9

Q ss_pred             CCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCCc-hhHHHHHHHHHHhccCCCCCcceeeeeeeec-cCceEEEE
Q 005257          364 KGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHEND-GGTRAFLAEISSLGRLKHKSLVGLRGWCKRE-KGSLMLVY  441 (705)
Q Consensus       364 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~-~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~-~~~~~lV~  441 (705)
                      ++|...+.||.|++|.||++.+..+++.+|+|.+..... .....+.+|++++++++||||++++++|... .+.+++||
T Consensus         1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~   80 (287)
T cd06621           1 EKIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPNPDLQKQILRELEINKSCKSPYIVKYYGAFLDESSSSIGIAM   80 (287)
T ss_pred             CceEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCCchHHHHHHHHHHHHHHhCCCCCeeeeeeEEEccCCCeEEEEE
Confidence            367888999999999999999998899999999875433 4557799999999999999999999988643 34689999


Q ss_pred             eeCCCCChhHHHHhcC-CCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecCC
Q 005257          442 DYMENGSLDKWIFQCD-GSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGH  520 (705)
Q Consensus       442 E~~~~gsL~~~L~~~~-~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~~  520 (705)
                      ||+++++|.+++.... ....+++..+..++.|++.||.|||+   .+++|+||+|+||++++++.++|+|||++.....
T Consensus        81 e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~---~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~  157 (287)
T cd06621          81 EYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHS---RKIIHRDIKPSNILLTRKGQVKLCDFGVSGELVN  157 (287)
T ss_pred             EecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEEecCCeEEEeeccccccccc
Confidence            9999999999876422 23368999999999999999999998   9999999999999999999999999999875543


Q ss_pred             CCcceeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhhCCCCCCCCCc---cHHHHHHHHHHhCchhHHHHHhh
Q 005257          521 GQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKP---NLVEMVWELMVQGKLLDALDARL  597 (705)
Q Consensus       521 ~~~~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~---~~~~~v~~~~~~~~~~~~id~~l  597 (705)
                      ...   ....++..|+|||.+.+..++.++|||||||++|||++|+.||.....   ...+. ..........     .+
T Consensus       158 ~~~---~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~-~~~~~~~~~~-----~~  228 (287)
T cd06621         158 SLA---GTFTGTSFYMAPERIQGKPYSITSDVWSLGLTLLEVAQNRFPFPPEGEPPLGPIEL-LSYIVNMPNP-----EL  228 (287)
T ss_pred             ccc---ccccCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccCCCCChHHH-HHHHhcCCch-----hh
Confidence            221   124578899999999888999999999999999999999999976522   11111 1111111110     01


Q ss_pred             hcCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 005257          598 RAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKV  635 (705)
Q Consensus       598 ~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  635 (705)
                      ...........+.+.+++.+||+.+|++|||+.|+++.
T Consensus       229 ~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~eil~~  266 (287)
T cd06621         229 KDEPGNGIKWSEEFKDFIKQCLEKDPTRRPTPWDMLEH  266 (287)
T ss_pred             ccCCCCCCchHHHHHHHHHHHcCCCcccCCCHHHHHhC
Confidence            00011112234678999999999999999999999884

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

Probab=100.00  E-value=3.4e-35  Score=305.44  Aligned_cols=255  Identities=24%  Similarity=0.374  Sum_probs=202.8

Q ss_pred             CCCcceEEeecCceEEEEEEEcC-CCeEEEEEEeccC----------CchhHHHHHHHHHHhcc-CCCCCcceeeeeeee
Q 005257          365 GFSEENVIGVGGNGKVYKGVLEG-GGAEIAVKRISHE----------NDGGTRAFLAEISSLGR-LKHKSLVGLRGWCKR  432 (705)
Q Consensus       365 ~f~~~~~LG~G~fg~Vy~~~~~~-~~~~vavK~i~~~----------~~~~~~~~~~Ei~~l~~-l~Hpniv~l~g~~~~  432 (705)
                      +|+..+.||+|+||.||+|.+.. .++.+|+|.+...          ......++.+|+.++.+ ++||||+++++++..
T Consensus         1 ~y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~   80 (269)
T cd08528           1 EYAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLE   80 (269)
T ss_pred             CchhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEcc
Confidence            47778899999999999999987 6788999987543          22234567889988875 799999999998876


Q ss_pred             ccCceEEEEeeCCCCChhHHHHhc-CCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeee
Q 005257          433 EKGSLMLVYDYMENGSLDKWIFQC-DGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGD  511 (705)
Q Consensus       433 ~~~~~~lV~E~~~~gsL~~~L~~~-~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~D  511 (705)
                       ++..++||||+++++|.+++... .....+++..+++++.|++.||.|||+  ..+++|+||||+||+++.++.+||+|
T Consensus        81 -~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~--~~~i~H~dl~~~nil~~~~~~~~l~d  157 (269)
T cd08528          81 -NDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHK--EKRIVHRDLTPNNIMLGEDDKVTITD  157 (269)
T ss_pred             -CCeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhcc--CCceeecCCCHHHEEECCCCcEEEec
Confidence             67899999999999999988542 223368999999999999999999995  36899999999999999999999999


Q ss_pred             eccceecCCCCcceeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhH
Q 005257          512 FGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLD  591 (705)
Q Consensus       512 FGla~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~  591 (705)
                      ||++.......  ......|+..|+|||.+.+..++.++||||||+++|||++|+.||......  ... .....+... 
T Consensus       158 fg~~~~~~~~~--~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~ll~~l~~g~~p~~~~~~~--~~~-~~~~~~~~~-  231 (269)
T cd08528         158 FGLAKQKQPES--KLTSVVGTILYSCPEIVKNEPYGEKADVWAFGCILYQMCTLQPPFYSTNML--SLA-TKIVEAVYE-  231 (269)
T ss_pred             ccceeeccccc--ccccccCcccCcChhhhcCCCCchHHHHHHHHHHHHHHHhCCCcccccCHH--HHH-HHHhhccCC-
Confidence            99998765433  223456889999999999888999999999999999999999999654321  111 111111110 


Q ss_pred             HHHHhhhcCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHH
Q 005257          592 ALDARLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLE  637 (705)
Q Consensus       592 ~id~~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  637 (705)
                               ..........+.+++.+||+.||++||++.|+..++.
T Consensus       232 ---------~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~e~~~~~~  268 (269)
T cd08528         232 ---------PLPEGMYSEDVTDVITSCLTPDAEARPDIIQVSAMIS  268 (269)
T ss_pred             ---------cCCcccCCHHHHHHHHHHCCCCCccCCCHHHHHHHhc
Confidence                     0001123456889999999999999999999998875

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.

>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

Probab=100.00  E-value=8.2e-35  Score=304.75  Aligned_cols=252  Identities=23%  Similarity=0.345  Sum_probs=196.7

Q ss_pred             CCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCC-chhHHHHHHHHHH-hccCCCCCcceeeeeeeeccCceEEEE
Q 005257          364 KGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHEN-DGGTRAFLAEISS-LGRLKHKSLVGLRGWCKREKGSLMLVY  441 (705)
Q Consensus       364 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~-~~~~~~~~~Ei~~-l~~l~Hpniv~l~g~~~~~~~~~~lV~  441 (705)
                      ++|+..+.||+|+||.||++.+..+++.||+|+++... .....++..|+.. ++.++||||+++++++.. ++..+++|
T Consensus         1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~iv~~~~~~~~-~~~~~lv~   79 (283)
T cd06617           1 DDLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQEQKRLLMDLDISMRSVDCPYTVTFYGALFR-EGDVWICM   79 (283)
T ss_pred             CCceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcHHHHHHHHHHHHHHHHcCCCCeeeeeEEEec-CCcEEEEh
Confidence            46888999999999999999999999999999987653 2334556667665 566789999999999876 66899999


Q ss_pred             eeCCCCChhHHHHhc-CCCCcccHHHHHHHHHHHHHHHHHHhcCCCC-CeeecCCCCCCeEEccCCCeeeeeeccceecC
Q 005257          442 DYMENGSLDKWIFQC-DGSMMLSCEERIRVLKDVAAGVLYLHEGWEK-KVLHRDIKSSNVLLDKEMNGRLGDFGLARMHG  519 (705)
Q Consensus       442 E~~~~gsL~~~L~~~-~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~-~iiHrDLkp~NILld~~~~~kL~DFGla~~~~  519 (705)
                      ||++ |+|.+++... .....+++..++.++.|++.||.|||+   + +++||||||+||+++.++.+||+|||+++...
T Consensus        80 e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~~i~h~dlkp~nil~~~~~~~kl~dfg~~~~~~  155 (283)
T cd06617          80 EVMD-TSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHS---KLSVIHRDVKPSNVLINRNGQVKLCDFGISGYLV  155 (283)
T ss_pred             hhhc-ccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhh---cCCeecCCCCHHHEEECCCCCEEEeecccccccc
Confidence            9996 6898888653 223468999999999999999999998   5 89999999999999999999999999998654


Q ss_pred             CCCcceeeeeeccccCCCcccccc----CCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhHHHHH
Q 005257          520 HGQVASTTRVVGTVGYLAPEVFSS----GRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDA  595 (705)
Q Consensus       520 ~~~~~~~~~~~gt~~y~APE~~~~----~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~  595 (705)
                      ....  .+...|+..|+|||.+.+    ..++.++|+|||||++|||++|+.||....... +....... +        
T Consensus       156 ~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~-~~~~~~~~-~--------  223 (283)
T cd06617         156 DSVA--KTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDSWKTPF-QQLKQVVE-E--------  223 (283)
T ss_pred             cccc--cccccCCccccChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCCccccCH-HHHHHHHh-c--------
Confidence            3221  122467899999998864    446889999999999999999999997533221 11111110 0        


Q ss_pred             hhhcCCCCC-HHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 005257          596 RLRAKGGFD-EDEVERVLHLGLLCAYPDPRARPTMRQVVKV  635 (705)
Q Consensus       596 ~l~~~~~~~-~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  635 (705)
                       ..  ...+ ....+.+.+++..||..+|++||++.++++.
T Consensus       224 -~~--~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~  261 (283)
T cd06617         224 -PS--PQLPAEKFSPEFQDFVNKCLKKNYKERPNYPELLQH  261 (283)
T ss_pred             -CC--CCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence             00  1111 1234568899999999999999999999873

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs

>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

Probab=100.00  E-value=3.3e-35  Score=306.04  Aligned_cols=255  Identities=25%  Similarity=0.415  Sum_probs=200.1

Q ss_pred             CCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCCc----------hhHHHHHHHHHHhccCCCCCcceeeeeeeecc
Q 005257          365 GFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHEND----------GGTRAFLAEISSLGRLKHKSLVGLRGWCKREK  434 (705)
Q Consensus       365 ~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~----------~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~  434 (705)
                      +|...+.||+|+||.||+|....+++.+|+|.++....          ...+.+.+|+.+++.++|||++++++++.. .
T Consensus         2 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~   80 (272)
T cd06629           2 KWVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFETT-E   80 (272)
T ss_pred             ceeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEecc-C
Confidence            46678899999999999999988899999998854211          113467889999999999999999998876 6


Q ss_pred             CceEEEEeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeecc
Q 005257          435 GSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGL  514 (705)
Q Consensus       435 ~~~~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGl  514 (705)
                      +..++||||+++++|.+++.+..   .+++..+..++.|++.||.|||+   .+++|+||+|+||+++.++.++|+|||+
T Consensus        81 ~~~~lv~e~~~~~~L~~~l~~~~---~l~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~~~nil~~~~~~~~l~d~~~  154 (272)
T cd06629          81 EYLSIFLEYVPGGSIGSCLRTYG---RFEEQLVRFFTEQVLEGLAYLHS---KGILHRDLKADNLLVDADGICKISDFGI  154 (272)
T ss_pred             CceEEEEecCCCCcHHHHHhhcc---CCCHHHHHHHHHHHHHHHHHHhh---CCeeecCCChhhEEEcCCCeEEEeeccc
Confidence            78899999999999999997642   68999999999999999999998   8999999999999999999999999999


Q ss_pred             ceecCCCCcc-eeeeeeccccCCCccccccCC--CCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhH
Q 005257          515 ARMHGHGQVA-STTRVVGTVGYLAPEVFSSGR--ASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLD  591 (705)
Q Consensus       515 a~~~~~~~~~-~~~~~~gt~~y~APE~~~~~~--~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~  591 (705)
                      ++........ ......|+..|+|||.+....  ++.++||||||+++||+++|+.||.....  .....+..... ...
T Consensus       155 ~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~--~~~~~~~~~~~-~~~  231 (272)
T cd06629         155 SKKSDDIYDNDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSDEEA--IAAMFKLGNKR-SAP  231 (272)
T ss_pred             cccccccccccccccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHhCCCCCcCcch--HHHHHHhhccc-cCC
Confidence            9765432211 123346789999999987654  78999999999999999999999965332  11111111110 000


Q ss_pred             HHHHhhhcCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 005257          592 ALDARLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKV  635 (705)
Q Consensus       592 ~id~~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  635 (705)
                      .+.      ..........+.+++..||+++|++||++.+++++
T Consensus       232 ~~~------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~  269 (272)
T cd06629         232 PIP------PDVSMNLSPVALDFLNACFTINPDNRPTARELLQH  269 (272)
T ss_pred             cCC------ccccccCCHHHHHHHHHHhcCChhhCCCHHHHhhC
Confidence            000      11112334678889999999999999999999874

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte

>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

Probab=100.00  E-value=3.5e-35  Score=303.48  Aligned_cols=248  Identities=27%  Similarity=0.328  Sum_probs=204.6

Q ss_pred             CCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCC---chhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEEEE
Q 005257          365 GFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHEN---DGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVY  441 (705)
Q Consensus       365 ~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~---~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~lV~  441 (705)
                      +|+..+.||+|+||.||+|.+..+++.+|+|.+....   ....+.+.+|++++++++||||+++++.+.. ....++|+
T Consensus         1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~lv~   79 (258)
T cd05578           1 HFELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYSFQD-EENMYLVV   79 (258)
T ss_pred             CceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHhhcC-CCeEEEEE
Confidence            4788899999999999999999889999999987542   2346789999999999999999999998765 67899999


Q ss_pred             eeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecCCC
Q 005257          442 DYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHG  521 (705)
Q Consensus       442 E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~~~  521 (705)
                      ||+++++|.+++...   ..+++.++..++.|+++||.|||+   ++++|+||+|+||++++++.++|+|||++......
T Consensus        80 e~~~~~~L~~~l~~~---~~l~~~~~~~~~~~i~~~l~~lh~---~~i~h~dl~~~nil~~~~~~~~l~d~~~~~~~~~~  153 (258)
T cd05578          80 DLLLGGDLRYHLSQK---VKFSEEQVKFWICEIVLALEYLHS---KGIIHRDIKPDNILLDEQGHVHITDFNIATKVTPD  153 (258)
T ss_pred             eCCCCCCHHHHHHhc---CCcCHHHHHHHHHHHHHHHHHHHh---CCeeccCCCHHHeEEcCCCCEEEeecccccccCCC
Confidence            999999999999754   268999999999999999999998   99999999999999999999999999998866443


Q ss_pred             CcceeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhHHHHHhhhcCC
Q 005257          522 QVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRAKG  601 (705)
Q Consensus       522 ~~~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~l~~~~  601 (705)
                      .  ......|+..|+|||.+.+..++.++|+||||+++|+|++|+.||........+........            ...
T Consensus       154 ~--~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~------------~~~  219 (258)
T cd05578         154 T--LTTSTSGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRPYRGHSRTIRDQIRAKQET------------ADV  219 (258)
T ss_pred             c--cccccCCChhhcCHHHHcccCCCCcccchhhHHHHHHHHhCCCCCCCCCccHHHHHHHHhcc------------ccc
Confidence            2  22234678899999999888899999999999999999999999986553222222111110            112


Q ss_pred             CCCHHHHHHHHHHHHHcCCCCCCCCCCH--HHHH
Q 005257          602 GFDEDEVERVLHLGLLCAYPDPRARPTM--RQVV  633 (705)
Q Consensus       602 ~~~~~~~~~l~~l~~~Cl~~dP~~RPs~--~evl  633 (705)
                      ..+......+.+++.+||+.||.+||++  +|++
T Consensus       220 ~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~l~  253 (258)
T cd05578         220 LYPATWSTEAIDAINKLLERDPQKRLGDNLKDLK  253 (258)
T ss_pred             cCcccCcHHHHHHHHHHccCChhHcCCccHHHHh
Confidence            2333445778899999999999999999  5554

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.

>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

Probab=100.00  E-value=1.1e-34  Score=299.93  Aligned_cols=253  Identities=24%  Similarity=0.427  Sum_probs=209.0

Q ss_pred             CCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCCc-hhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEEEEe
Q 005257          364 KGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHEND-GGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYD  442 (705)
Q Consensus       364 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~-~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~lV~E  442 (705)
                      ++|+..+.||+|++|.||++.+..+++.|+||++..... ...+.+.+|+..+.+++|+|++++++.+.. .+.+++|+|
T Consensus         1 ~~~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~~lv~e   79 (264)
T cd06623           1 SDLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFRKQLLRELKTLRSCESPYVVKCYGAFYK-EGEISIVLE   79 (264)
T ss_pred             CcceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCeeeEEEEEcc-CCeEEEEEE
Confidence            367888999999999999999998899999999876644 456789999999999999999999998876 678999999


Q ss_pred             eCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecCCCC
Q 005257          443 YMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQ  522 (705)
Q Consensus       443 ~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~~~~  522 (705)
                      |+++++|.+++...   ..+++..++.++.|+++||.|||+  ..+++|+||+|+||+++.++.++|+|||++.......
T Consensus        80 ~~~~~~L~~~l~~~---~~l~~~~~~~~~~~l~~~l~~lh~--~~~~~H~~l~~~ni~~~~~~~~~l~df~~~~~~~~~~  154 (264)
T cd06623          80 YMDGGSLADLLKKV---GKIPEPVLAYIARQILKGLDYLHT--KRHIIHRDIKPSNLLINSKGEVKIADFGISKVLENTL  154 (264)
T ss_pred             ecCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHhc--cCCCccCCCCHHHEEECCCCCEEEccCccceecccCC
Confidence            99999999999764   268999999999999999999995  2899999999999999999999999999998765433


Q ss_pred             cceeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhhCCCCCCCCCc-cHHHHHHHHHHhCchhHHHHHhhhcCC
Q 005257          523 VASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKP-NLVEMVWELMVQGKLLDALDARLRAKG  601 (705)
Q Consensus       523 ~~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~-~~~~~v~~~~~~~~~~~~id~~l~~~~  601 (705)
                      ... ....++..|+|||.+.+..++.++||||||+++|||++|+.||..... ...+.. ..+.....           .
T Consensus       155 ~~~-~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~-~~~~~~~~-----------~  221 (264)
T cd06623         155 DQC-NTFVGTVTYMSPERIQGESYSYAADIWSLGLTLLECALGKFPFLPPGQPSFFELM-QAICDGPP-----------P  221 (264)
T ss_pred             Ccc-cceeecccccCHhhhCCCCCCchhhHHHHHHHHHHHHhCCCCCccccccCHHHHH-HHHhcCCC-----------C
Confidence            222 235688999999999888899999999999999999999999976542 111111 11111100           1


Q ss_pred             CCCHH-HHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 005257          602 GFDED-EVERVLHLGLLCAYPDPRARPTMRQVVKV  635 (705)
Q Consensus       602 ~~~~~-~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  635 (705)
                      ..+.. ....+.+++..||+++|++||++.+++++
T Consensus       222 ~~~~~~~~~~l~~li~~~l~~~p~~R~~~~~ll~~  256 (264)
T cd06623         222 SLPAEEFSPEFRDFISACLQKDPKKRPSAAELLQH  256 (264)
T ss_pred             CCCcccCCHHHHHHHHHHccCChhhCCCHHHHHhC
Confidence            12223 45678999999999999999999999874

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of

>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

Probab=100.00  E-value=2.1e-35  Score=312.45  Aligned_cols=246  Identities=22%  Similarity=0.338  Sum_probs=199.8

Q ss_pred             ceEEeecCceEEEEEEEcCCCeEEEEEEeccCCchhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEEEEeeCCCCC
Q 005257          369 ENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGS  448 (705)
Q Consensus       369 ~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~lV~E~~~~gs  448 (705)
                      ...||+|+||.||++....+++.||+|.+........+.+.+|+.++..++|||++++++.+.. ++..++|+||+++++
T Consensus        26 ~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~-~~~~~iv~e~~~~~~  104 (297)
T cd06659          26 YIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHQNVVEMYKSYLV-GEELWVLMEFLQGGA  104 (297)
T ss_pred             hhhcCCCCceeEEEEEEcCCCCEEEEEEEEecccchHHHHHHHHHHHHhCCCCchhhhhhheee-CCeEEEEEecCCCCC
Confidence            3469999999999999988899999999876555556778999999999999999999998876 678899999999999


Q ss_pred             hhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecCCCCcceeee
Q 005257          449 LDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTR  528 (705)
Q Consensus       449 L~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~~~~~~~~~~  528 (705)
                      |..++..    ..+++.++..++.|++.||.|||+   .+++||||||+||+++.++.+||+|||++........ ....
T Consensus       105 L~~~~~~----~~~~~~~~~~~~~qi~~~L~~LH~---~~ivH~dl~p~Nill~~~~~~kL~dfg~~~~~~~~~~-~~~~  176 (297)
T cd06659         105 LTDIVSQ----TRLNEEQIATVCESVLQALCYLHS---QGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVP-KRKS  176 (297)
T ss_pred             HHHHHhh----cCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHeEEccCCcEEEeechhHhhcccccc-cccc
Confidence            9998743    258999999999999999999998   9999999999999999999999999999875543322 2233


Q ss_pred             eeccccCCCccccccCCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhHHHHHhhhcCCCCCHHHH
Q 005257          529 VVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRAKGGFDEDEV  608 (705)
Q Consensus       529 ~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~l~~~~~~~~~~~  608 (705)
                      ..|+..|+|||++.+..++.++|||||||++|||++|+.||......  +... .+.....     ..    ........
T Consensus       177 ~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~--~~~~-~~~~~~~-----~~----~~~~~~~~  244 (297)
T cd06659         177 LVGTPYWMAPEVISRTPYGTEVDIWSLGIMVIEMVDGEPPYFSDSPV--QAMK-RLRDSPP-----PK----LKNAHKIS  244 (297)
T ss_pred             eecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH--HHHH-HHhccCC-----CC----ccccCCCC
Confidence            57899999999998888999999999999999999999999754321  1111 1111100     00    00111223


Q ss_pred             HHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 005257          609 ERVLHLGLLCAYPDPRARPTMRQVVKV  635 (705)
Q Consensus       609 ~~l~~l~~~Cl~~dP~~RPs~~evl~~  635 (705)
                      ..+.+++..||+.+|++||++.+++++
T Consensus       245 ~~l~~~i~~~l~~~P~~Rps~~~ll~~  271 (297)
T cd06659         245 PVLRDFLERMLTREPQERATAQELLDH  271 (297)
T ss_pred             HHHHHHHHHHhcCCcccCcCHHHHhhC
Confidence            467889999999999999999999985

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i

>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3

Probab=100.00  E-value=8.2e-35  Score=303.09  Aligned_cols=257  Identities=25%  Similarity=0.455  Sum_probs=200.2

Q ss_pred             CCcceEEeecCceEEEEEEEcC---CCeEEEEEEeccC--CchhHHHHHHHHHHhccCCCCCcceeeeeeeeccC-----
Q 005257          366 FSEENVIGVGGNGKVYKGVLEG---GGAEIAVKRISHE--NDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKG-----  435 (705)
Q Consensus       366 f~~~~~LG~G~fg~Vy~~~~~~---~~~~vavK~i~~~--~~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~-----  435 (705)
                      |...+.||+|+||.||+|.+..   +++.||||++...  .....+++.+|++++++++||||+++++++...+.     
T Consensus         1 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~   80 (273)
T cd05074           1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKGRLP   80 (273)
T ss_pred             CcchhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCChHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCCccc
Confidence            4567889999999999998753   4689999998654  23456678999999999999999999998764221     


Q ss_pred             ceEEEEeeCCCCChhHHHHhcC---CCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeee
Q 005257          436 SLMLVYDYMENGSLDKWIFQCD---GSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDF  512 (705)
Q Consensus       436 ~~~lV~E~~~~gsL~~~L~~~~---~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DF  512 (705)
                      ..++++||+++|+|..++....   ....+++..+.+++.|++.||+|||+   .+|+||||||+||++++++.+||+||
T Consensus        81 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~---~~i~H~dikp~nili~~~~~~kl~df  157 (273)
T cd05074          81 IPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSS---KNFIHRDLAARNCMLNENMTVCVADF  157 (273)
T ss_pred             ceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHh---CCEeecccchhhEEEcCCCCEEECcc
Confidence            2478899999999998875422   12257899999999999999999998   89999999999999999999999999


Q ss_pred             ccceecCCCCcc-eeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhh-CCCCCCCCCccHHHHHHHHHHhCchh
Q 005257          513 GLARMHGHGQVA-STTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLS-GRRPIEEGKPNLVEMVWELMVQGKLL  590 (705)
Q Consensus       513 Gla~~~~~~~~~-~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~Ellt-G~~Pf~~~~~~~~~~v~~~~~~~~~~  590 (705)
                      |+++........ ......+++.|++||.+....++.++|||||||++|||++ |+.||......   .....+..+.. 
T Consensus       158 g~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~sDi~slG~il~el~~~g~~p~~~~~~~---~~~~~~~~~~~-  233 (273)
T cd05074         158 GLSKKIYSGDYYRQGCASKLPVKWLALESLADNVYTTHSDVWAFGVTMWEIMTRGQTPYAGVENS---EIYNYLIKGNR-  233 (273)
T ss_pred             cccccccCCcceecCCCccCchhhcCHhHHhcCccchhhhhHHHHHHHHHHhhCCCCCCCCCCHH---HHHHHHHcCCc-
Confidence            999865432211 1122345678999999988889999999999999999999 88888654321   11111111110 


Q ss_pred             HHHHHhhhcCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHhc
Q 005257          591 DALDARLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLEGK  639 (705)
Q Consensus       591 ~~id~~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~  639 (705)
                                ...+......+.+++.+||+.+|++||++.++++.|++.
T Consensus       234 ----------~~~~~~~~~~~~~l~~~~l~~~p~~Rps~~~~~~~l~~~  272 (273)
T cd05074         234 ----------LKQPPDCLEDVYELMCQCWSPEPKCRPSFQHLRDQLELI  272 (273)
T ss_pred             ----------CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence                      111223446789999999999999999999999999853

Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac

>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

Probab=100.00  E-value=5.7e-35  Score=306.25  Aligned_cols=262  Identities=25%  Similarity=0.332  Sum_probs=199.8

Q ss_pred             CCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCC--chhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEEEEe
Q 005257          365 GFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHEN--DGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYD  442 (705)
Q Consensus       365 ~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~--~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~lV~E  442 (705)
                      +|+..+.||.|++|.||+|+...+++.||||++....  ......+.+|++++++++||||+++++++.. +...++|||
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~~v~e   79 (284)
T cd07860           1 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHT-ENKLYLVFE   79 (284)
T ss_pred             CceeeeeecCCCceEEEEEEECCCCCEEEEEEccccccccccchHHHHHHHHHHhcCCCCCcchhhhccc-CCcEEEEee
Confidence            4788899999999999999999889999999886543  2234578899999999999999999998875 678999999


Q ss_pred             eCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecCCCC
Q 005257          443 YMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQ  522 (705)
Q Consensus       443 ~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~~~~  522 (705)
                      |+. ++|..++...... .+++.++..++.|++.||+|||+   .+++|+||+|+||++++++.+||+|||+++......
T Consensus        80 ~~~-~~l~~~~~~~~~~-~l~~~~~~~~~~~i~~~l~~lh~---~~i~H~~l~p~nill~~~~~~~l~dfg~~~~~~~~~  154 (284)
T cd07860          80 FLH-QDLKKFMDASPLS-GIPLPLIKSYLFQLLQGLAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV  154 (284)
T ss_pred             ccc-cCHHHHHHhCCCC-CCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEECCCCCEEEeeccchhhcccCc
Confidence            996 6899888764433 68999999999999999999998   999999999999999999999999999987654332


Q ss_pred             cceeeeeeccccCCCccccccCC-CCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHh-CchhHHHHH-----
Q 005257          523 VASTTRVVGTVGYLAPEVFSSGR-ASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQ-GKLLDALDA-----  595 (705)
Q Consensus       523 ~~~~~~~~gt~~y~APE~~~~~~-~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~-~~~~~~id~-----  595 (705)
                      .. .....++..|+|||.+.+.. ++.++|||||||++|||+||+.||......  +...+.... +...+.+.+     
T Consensus       155 ~~-~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~  231 (284)
T cd07860         155 RT-YTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI--DQLFRIFRTLGTPDEVVWPGVTSL  231 (284)
T ss_pred             cc-cccccccccccCCeEEecCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHH--HHHHHHHHHhCCCChhhhhhhhHH
Confidence            21 22235688999999886644 688999999999999999999999764421  111111111 100000000     


Q ss_pred             -----hhhcCCC-----CCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 005257          596 -----RLRAKGG-----FDEDEVERVLHLGLLCAYPDPRARPTMRQVVKV  635 (705)
Q Consensus       596 -----~l~~~~~-----~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  635 (705)
                           .......     ........+.+++.+||+.||++||++++++++
T Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~  281 (284)
T cd07860         232 PDYKPSFPKWARQDFSKVVPPLDEDGRDLLSQMLHYDPNKRISAKAALAH  281 (284)
T ss_pred             HHHHhhcccccccCHHHHcccCCHHHHHHHHHhcCCCcccCCCHHHHhcC
Confidence                 0000000     001122456789999999999999999998863

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex

>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

Probab=100.00  E-value=4.8e-35  Score=303.28  Aligned_cols=251  Identities=26%  Similarity=0.440  Sum_probs=204.2

Q ss_pred             CCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCC-chhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEEEEee
Q 005257          365 GFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHEN-DGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDY  443 (705)
Q Consensus       365 ~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~-~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~lV~E~  443 (705)
                      +|+..+.||+|++|.||++.+..+++.+|+|++.... ....+++.+|++++++++||||+++++.+.. ++..++++||
T Consensus         2 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~-~~~~~lv~e~   80 (265)
T cd06605           2 DLEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINEAIQKQILRELDILHKCNSPYIVGFYGAFYN-NGDISICMEY   80 (265)
T ss_pred             cchHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccChHHHHHHHHHHHHHHHCCCCchhhhheeeec-CCEEEEEEEe
Confidence            5677788999999999999999889999999987653 3445678999999999999999999998876 5789999999


Q ss_pred             CCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecCCCCc
Q 005257          444 MENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQV  523 (705)
Q Consensus       444 ~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~~~~~  523 (705)
                      +++++|.+++....  ..+++..+..++.|++.||.|||+  ..+++|+||||+||++++++.+||+|||.+........
T Consensus        81 ~~~~~L~~~~~~~~--~~~~~~~~~~~~~~l~~~l~~lH~--~~~i~H~dl~~~ni~~~~~~~~~l~d~g~~~~~~~~~~  156 (265)
T cd06605          81 MDGGSLDKILKEVQ--GRIPERILGKIAVAVLKGLTYLHE--KHKIIHRDVKPSNILVNSRGQIKLCDFGVSGQLVNSLA  156 (265)
T ss_pred             cCCCcHHHHHHHcc--CCCCHHHHHHHHHHHHHHHHHHcC--CCCeecCCCCHHHEEECCCCCEEEeecccchhhHHHHh
Confidence            99999999997643  368999999999999999999996  47999999999999999999999999999875533221


Q ss_pred             ceeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhhCCCCCCCCCc---cHHHHHHHHHHhCchhHHHHHhhhcC
Q 005257          524 ASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKP---NLVEMVWELMVQGKLLDALDARLRAK  600 (705)
Q Consensus       524 ~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~---~~~~~v~~~~~~~~~~~~id~~l~~~  600 (705)
                      .   ...++..|+|||.+.+..++.++||||||+++|||++|+.||.....   ...+.+ +....+..           
T Consensus       157 ~---~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~-~~~~~~~~-----------  221 (265)
T cd06605         157 K---TFVGTSSYMAPERIQGNDYSVKSDIWSLGLSLIELATGRFPYPPENDPPDGIFELL-QYIVNEPP-----------  221 (265)
T ss_pred             h---cccCChhccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCccccccccHHHHH-HHHhcCCC-----------
Confidence            1   15688999999999888999999999999999999999999975421   111111 11111100           


Q ss_pred             CCCCHH-HHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 005257          601 GGFDED-EVERVLHLGLLCAYPDPRARPTMRQVVKV  635 (705)
Q Consensus       601 ~~~~~~-~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  635 (705)
                      ...+.. ....+.+++..||..+|++||++.+++..
T Consensus       222 ~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~  257 (265)
T cd06605         222 PRLPSGKFSPDFQDFVNLCLIKDPRERPSYKELLEH  257 (265)
T ss_pred             CCCChhhcCHHHHHHHHHHcCCCchhCcCHHHHhhC
Confidence            111122 45668899999999999999999998763

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity

>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

Probab=100.00  E-value=5.7e-35  Score=303.08  Aligned_cols=250  Identities=24%  Similarity=0.392  Sum_probs=198.6

Q ss_pred             CCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCCc------hhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceE
Q 005257          365 GFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHEND------GGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLM  438 (705)
Q Consensus       365 ~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~------~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~  438 (705)
                      +|...+.||+|+||.||+|... +++.+|+|.+.....      ...+.+.+|++++++++|+||++++++|.. .+..+
T Consensus         1 ~~~~~~~ig~g~~~~v~~~~~~-~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~~   78 (265)
T cd06631           1 EWTKGEVLGKGAYGTVYCGLTN-QGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLD-DNTIS   78 (265)
T ss_pred             CccccceEeccCCeEEEEEEEc-CCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeec-CCeEE
Confidence            4677889999999999999875 678899998864421      223568899999999999999999999886 67899


Q ss_pred             EEEeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceec
Q 005257          439 LVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMH  518 (705)
Q Consensus       439 lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~  518 (705)
                      +|+||+++++|.+++.+..   .+++..+..++.|++.||.|||+   .+++|+||+|+||++++++.+||+|||++...
T Consensus        79 lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~  152 (265)
T cd06631          79 IFMEFVPGGSISSILNRFG---PLPEPVFCKYTKQILDGVAYLHN---NCVVHRDIKGNNVMLMPNGIIKLIDFGCARRL  152 (265)
T ss_pred             EEEecCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHh---CCcccCCcCHHhEEECCCCeEEeccchhhHhh
Confidence            9999999999999996543   58899999999999999999998   89999999999999999999999999998754


Q ss_pred             CCCC-----cceeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhHHH
Q 005257          519 GHGQ-----VASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDAL  593 (705)
Q Consensus       519 ~~~~-----~~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~~i  593 (705)
                      ....     ........|+..|+|||++.+..++.++|||||||++|||++|+.||......  ............    
T Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~--~~~~~~~~~~~~----  226 (265)
T cd06631         153 AWVGLHGTHSNMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMATGKPPLASMDRL--AAMFYIGAHRGL----  226 (265)
T ss_pred             hhccccccccccccccCCCccccChhhhcCCCCcchhhHHHHHHHHHHHHhCCCccccCChH--HHHHHhhhccCC----
Confidence            3211     11122346889999999998888999999999999999999999999754321  110000000000    


Q ss_pred             HHhhhcCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHH
Q 005257          594 DARLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVK  634 (705)
Q Consensus       594 d~~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~  634 (705)
                            ....+......+..++.+||+++|++||++.++++
T Consensus       227 ------~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~  261 (265)
T cd06631         227 ------MPRLPDSFSAAAIDFVTSCLTRDQHERPSALQLLR  261 (265)
T ss_pred             ------CCCCCCCCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence                  01122234466789999999999999999999875

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.

>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2

Probab=100.00  E-value=8e-35  Score=303.07  Aligned_cols=253  Identities=21%  Similarity=0.350  Sum_probs=188.6

Q ss_pred             EEeecCceEEEEEEEcCC--CeEEEEEEeccCC-chhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEEEEeeCCCC
Q 005257          371 VIGVGGNGKVYKGVLEGG--GAEIAVKRISHEN-DGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENG  447 (705)
Q Consensus       371 ~LG~G~fg~Vy~~~~~~~--~~~vavK~i~~~~-~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~lV~E~~~~g  447 (705)
                      .||+|+||.||+|.....  ...+++|.+.... ....+.+.+|+.+++.++||||+++++.|.. ....++||||+++|
T Consensus         2 ~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~-~~~~~lv~e~~~~~   80 (268)
T cd05086           2 EIGNGWFGKVLLSEIYTDTGVARVVVKELKANASSKEQNEFLQQGDPYRILQHPNILQCLGQCVE-AIPYLLVFEYCELG   80 (268)
T ss_pred             cCCCCcCceEEEEEEEcCCCcceEEEEEecCCCChHHHHHHHHHHHHHhccCCcchhheEEEecC-CCccEEEEecCCCC
Confidence            599999999999976433  2456777776543 3456789999999999999999999999876 66889999999999


Q ss_pred             ChhHHHHhcCC-CCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecCCCC-cce
Q 005257          448 SLDKWIFQCDG-SMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQ-VAS  525 (705)
Q Consensus       448 sL~~~L~~~~~-~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~~~~-~~~  525 (705)
                      +|.+++.+... ...+++..+..++.|++.||+|||+   .+++||||||+|||++.++.+||+|||++....... ...
T Consensus        81 ~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~---~~i~H~dikp~nil~~~~~~~~l~Dfg~~~~~~~~~~~~~  157 (268)
T cd05086          81 DLKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHK---HNFLHSDLALRNCFLTSDLTVKVGDYGIGPSRYKEDYIET  157 (268)
T ss_pred             cHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHH---CCeeccCCccceEEEcCCccEEecccccccccCcchhhhc
Confidence            99999976432 2246777888999999999999998   999999999999999999999999999986432211 112


Q ss_pred             eeeeeccccCCCcccccc-------CCCCccccEEEEehhHHHHhh-CCCCCCCCCccHHHHHHHHHHhCchhHHHHHhh
Q 005257          526 TTRVVGTVGYLAPEVFSS-------GRASTQTDVFGFGILILEVLS-GRRPIEEGKPNLVEMVWELMVQGKLLDALDARL  597 (705)
Q Consensus       526 ~~~~~gt~~y~APE~~~~-------~~~s~ksDVwS~Gvvl~Ellt-G~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~l  597 (705)
                      .....|+..|+|||++..       ..++.++|||||||++|||++ |..||.....  .+....... +......++.+
T Consensus       158 ~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~--~~~~~~~~~-~~~~~~~~~~~  234 (268)
T cd05086         158 EDDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHLSD--REVLNHVIK-DQQVKLFKPQL  234 (268)
T ss_pred             ccCCcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCH--HHHHHHHHh-hcccccCCCcc
Confidence            223467889999999743       245789999999999999997 5678765432  111111111 11111111111


Q ss_pred             hcCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHH
Q 005257          598 RAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLE  637 (705)
Q Consensus       598 ~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  637 (705)
                            .......+.+++..|| .+|++||+++++++.|.
T Consensus       235 ------~~~~~~~~~~l~~~c~-~~P~~Rp~~~~i~~~l~  267 (268)
T cd05086         235 ------ELPYSERWYEVLQFCW-LSPEKRATAEEVHRLLT  267 (268)
T ss_pred             ------CCCCcHHHHHHHHHHh-hCcccCCCHHHHHHHhc
Confidence                  1123356777888999 57999999999998874

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage

>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

Probab=100.00  E-value=9.8e-35  Score=306.84  Aligned_cols=261  Identities=25%  Similarity=0.313  Sum_probs=199.8

Q ss_pred             CCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCCch-----hHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEE
Q 005257          365 GFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDG-----GTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLML  439 (705)
Q Consensus       365 ~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~~-----~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~l  439 (705)
                      +|...+.||+|++|.||+|....+++.||||++......     ....+..|++++++++|+||+++++++.. .+..++
T Consensus         1 ~y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-~~~~~l   79 (298)
T cd07841           1 RYEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFGH-KSNINL   79 (298)
T ss_pred             CceeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheeec-CCEEEE
Confidence            467788999999999999999888999999999765322     34567789999999999999999999886 678999


Q ss_pred             EEeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecC
Q 005257          440 VYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHG  519 (705)
Q Consensus       440 V~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~  519 (705)
                      ||||+ +|+|.+++....  ..+++.+++.++.||++||.|||+   .+++|+||||+||+++.++.+||+|||+++...
T Consensus        80 v~e~~-~~~L~~~i~~~~--~~~~~~~~~~~~~qi~~al~~lH~---~~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~  153 (298)
T cd07841          80 VFEFM-ETDLEKVIKDKS--IVLTPADIKSYMLMTLRGLEYLHS---NWILHRDLKPNNLLIASDGVLKLADFGLARSFG  153 (298)
T ss_pred             EEccc-CCCHHHHHhccC--CCCCHHHHHHHHHHHHHHHHHHHh---CCeeecCCChhhEEEcCCCCEEEccceeeeecc
Confidence            99999 899999996543  268999999999999999999998   999999999999999999999999999998765


Q ss_pred             CCCcceeeeeeccccCCCcccccc-CCCCccccEEEEehhHHHHhhCCCCCCCCCcc-HHHHHHHHHHhCchhHHHHHhh
Q 005257          520 HGQVASTTRVVGTVGYLAPEVFSS-GRASTQTDVFGFGILILEVLSGRRPIEEGKPN-LVEMVWELMVQGKLLDALDARL  597 (705)
Q Consensus       520 ~~~~~~~~~~~gt~~y~APE~~~~-~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~-~~~~v~~~~~~~~~~~~id~~l  597 (705)
                      ..... .....+++.|+|||.+.+ ..++.++|||||||++|||++|..||...... .........  +......-+..
T Consensus       154 ~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~  230 (298)
T cd07841         154 SPNRK-MTHQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGDSDIDQLGKIFEAL--GTPTEENWPGV  230 (298)
T ss_pred             CCCcc-ccccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCCccccCCccHHHHHHHHHHc--CCCchhhhhhc
Confidence            43221 122356788999999855 45789999999999999999997777653321 111111100  00000000000


Q ss_pred             ---------hcCCCC-----CHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 005257          598 ---------RAKGGF-----DEDEVERVLHLGLLCAYPDPRARPTMRQVVKV  635 (705)
Q Consensus       598 ---------~~~~~~-----~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  635 (705)
                               ......     .......+.+++..||+++|++|||+.|++++
T Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~e~l~~  282 (298)
T cd07841         231 TSLPDYVEFKPFPPTPLKQIFPAASDDALDLLQRLLTLNPNKRITARQALEH  282 (298)
T ss_pred             ccccccccccccCCcchhhhcccccHHHHHHHHHHhcCCcccCcCHHHHhhC
Confidence                     000000     11224678899999999999999999999984

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is

>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=2e-36  Score=322.43  Aligned_cols=251  Identities=24%  Similarity=0.339  Sum_probs=206.6

Q ss_pred             CCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCCchhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEEEEeeCC
Q 005257          366 FSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYME  445 (705)
Q Consensus       366 f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~lV~E~~~  445 (705)
                      +.+...||.|+||.|||+..+.++...|-|.+.....+..++|+-||++|...+||+||++++.+.. ++.+++..|||.
T Consensus        34 WeIiGELGDGAFGKVyKA~nket~~lAAaKvIetkseEELEDylVEIeILa~CdHP~ivkLl~ayy~-enkLwiliEFC~  112 (1187)
T KOG0579|consen   34 WEIIGELGDGAFGKVYKAVNKETKLLAAAKVIETKSEEELEDYLVEIEILAECDHPVIVKLLSAYYF-ENKLWILIEFCG  112 (1187)
T ss_pred             HHHHhhhcCccchhhhhhhcccchhhhhhhhhcccchhHHhhhhhhhhhhhcCCChHHHHHHHHHhc-cCceEEEEeecC
Confidence            3446779999999999999998888889999988888889999999999999999999999997765 678999999999


Q ss_pred             CCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecCCCCcce
Q 005257          446 NGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVAS  525 (705)
Q Consensus       446 ~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~~~~~~~  525 (705)
                      ||-.+.++-..+.  .|++.++.-+++|++.||.|||+   +.|||||||+.|||++-+|.++|+|||.+...... ...
T Consensus       113 GGAVDaimlEL~r--~LtE~QIqvvc~q~ldALn~LHs---~~iIHRDLKAGNiL~TldGdirLADFGVSAKn~~t-~qk  186 (1187)
T KOG0579|consen  113 GGAVDAIMLELGR--VLTEDQIQVVCYQVLDALNWLHS---QNIIHRDLKAGNILLTLDGDIRLADFGVSAKNKST-RQK  186 (1187)
T ss_pred             CchHhHHHHHhcc--ccchHHHHHHHHHHHHHHHHHhh---cchhhhhccccceEEEecCcEeeecccccccchhH-Hhh
Confidence            9999998877554  69999999999999999999999   99999999999999999999999999997543221 122


Q ss_pred             eeeeeccccCCCccccc-----cCCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhHHHHHhhhcC
Q 005257          526 TTRVVGTVGYLAPEVFS-----SGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRAK  600 (705)
Q Consensus       526 ~~~~~gt~~y~APE~~~-----~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~l~~~  600 (705)
                      ...++|||+|||||+..     ..+|++++||||||+.|.||..+.+|-..-.+.   .|.-.+.....+..        
T Consensus       187 RDsFIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHhelnpM---RVllKiaKSePPTL--------  255 (1187)
T KOG0579|consen  187 RDSFIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHHELNPM---RVLLKIAKSEPPTL--------  255 (1187)
T ss_pred             hccccCCcccccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCCccccchH---HHHHHHhhcCCCcc--------
Confidence            34479999999999863     468999999999999999999999997654431   11111111111111        


Q ss_pred             CCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 005257          601 GGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKV  635 (705)
Q Consensus       601 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  635 (705)
                       --+......+.++...|+..||..||++.+++++
T Consensus       256 -lqPS~Ws~~F~DfLk~cL~Knp~~Rp~aaqll~H  289 (1187)
T KOG0579|consen  256 -LQPSHWSRSFSDFLKRCLVKNPRNRPPAAQLLKH  289 (1187)
T ss_pred             -cCcchhhhHHHHHHHHHHhcCCccCCCHHHHhhC
Confidence             1133455678889999999999999999999874

>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]

Probab=100.00  E-value=2.8e-36  Score=294.40  Aligned_cols=254  Identities=28%  Similarity=0.415  Sum_probs=205.9

Q ss_pred             HhCCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCC----c----hhHHHHHHHHHHhccC-CCCCcceeeeeeee
Q 005257          362 ATKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHEN----D----GGTRAFLAEISSLGRL-KHKSLVGLRGWCKR  432 (705)
Q Consensus       362 at~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~----~----~~~~~~~~Ei~~l~~l-~Hpniv~l~g~~~~  432 (705)
                      .-+.|...+.||+|..++|.++.++.++.+.|+|++....    .    .-.++-.+|+.+|+++ -||+|+++.+++..
T Consensus        15 fy~~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~yes   94 (411)
T KOG0599|consen   15 FYAKYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVYES   94 (411)
T ss_pred             HHhhcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeeccC
Confidence            3456788899999999999999999999999999986431    1    1233457799999998 69999999998876


Q ss_pred             ccCceEEEEeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeee
Q 005257          433 EKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDF  512 (705)
Q Consensus       433 ~~~~~~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DF  512 (705)
                       ..-+++|+|.|+.|.|.++|...   ..+++++..+|++|+.+|++|||.   +.|+||||||+|||+|++.++||+||
T Consensus        95 -~sF~FlVFdl~prGELFDyLts~---VtlSEK~tR~iMrqlfegVeylHa---~~IVHRDLKpENILlddn~~i~isDF  167 (411)
T KOG0599|consen   95 -DAFVFLVFDLMPRGELFDYLTSK---VTLSEKETRRIMRQLFEGVEYLHA---RNIVHRDLKPENILLDDNMNIKISDF  167 (411)
T ss_pred             -cchhhhhhhhcccchHHHHhhhh---eeecHHHHHHHHHHHHHHHHHHHH---hhhhhcccChhheeeccccceEEecc
Confidence             66789999999999999999653   379999999999999999999998   99999999999999999999999999


Q ss_pred             ccceecCCCCcceeeeeeccccCCCcccccc------CCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHh
Q 005257          513 GLARMHGHGQVASTTRVVGTVGYLAPEVFSS------GRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQ  586 (705)
Q Consensus       513 Gla~~~~~~~~~~~~~~~gt~~y~APE~~~~------~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~  586 (705)
                      |.++....+..  ....+|||+|+|||.+.-      ..|+...|+|++||++|.|+.|-.||-....-   .+...+.+
T Consensus       168 GFa~~l~~Gek--LrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwHRkQm---lMLR~Ime  242 (411)
T KOG0599|consen  168 GFACQLEPGEK--LRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFWHRKQM---LMLRMIME  242 (411)
T ss_pred             ceeeccCCchh--HHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCchhHHHHH---HHHHHHHh
Confidence            99998877653  345799999999999842      35889999999999999999999998643211   11222333


Q ss_pred             CchhHHHHHhhhcCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 005257          587 GKLLDALDARLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKV  635 (705)
Q Consensus       587 ~~~~~~id~~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  635 (705)
                      |+..-      .  ..--.+......+|+.+|++.||.+|-|++|++.+
T Consensus       243 GkyqF------~--speWadis~~~KdLIsrlLqVdp~~Ritake~LaH  283 (411)
T KOG0599|consen  243 GKYQF------R--SPEWADISATVKDLISRLLQVDPTKRITAKEALAH  283 (411)
T ss_pred             ccccc------C--CcchhhccccHHHHHHHHHeeCchhcccHHHHhcC
Confidence            33210      0  11112334567899999999999999999999874

>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

Probab=100.00  E-value=6.9e-35  Score=306.53  Aligned_cols=249  Identities=22%  Similarity=0.335  Sum_probs=202.6

Q ss_pred             CCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCCchhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEEEEeeC
Q 005257          365 GFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYM  444 (705)
Q Consensus       365 ~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~lV~E~~  444 (705)
                      .|...+.||+|++|.||++....+++.+++|++........+.+.+|+.+++.++|||++++++++.. .+..++++||+
T Consensus        20 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~~~h~~vv~~~~~~~~-~~~~~~v~e~~   98 (285)
T cd06648          20 YLDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQQRRELLFNEVVIMRDYQHPNIVEMYSSYLV-GDELWVVMEFL   98 (285)
T ss_pred             hhhcceEeccCCCeEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHHcCCCChheEEEEEEc-CCeEEEEEecc
Confidence            34556799999999999999988899999999876555556778999999999999999999998775 67889999999


Q ss_pred             CCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecCCCCcc
Q 005257          445 ENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVA  524 (705)
Q Consensus       445 ~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~~~~~~  524 (705)
                      ++++|.+++..    ..+++.++..++.|++.||.|||+   .+++||||+|+||+++.++.++|+|||++........ 
T Consensus        99 ~~~~L~~~~~~----~~~~~~~~~~~~~ql~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~~l~d~g~~~~~~~~~~-  170 (285)
T cd06648          99 EGGALTDIVTH----TRMNEEQIATVCLAVLKALSFLHA---QGVIHRDIKSDSILLTSDGRVKLSDFGFCAQVSKEVP-  170 (285)
T ss_pred             CCCCHHHHHHh----CCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCChhhEEEcCCCcEEEcccccchhhccCCc-
Confidence            99999999865    258999999999999999999998   9999999999999999999999999999875543322 


Q ss_pred             eeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhHHHHHhhhcCCCCC
Q 005257          525 STTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRAKGGFD  604 (705)
Q Consensus       525 ~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~l~~~~~~~  604 (705)
                      ......|++.|+|||.+.+..++.++|||||||++|||++|+.||....+.  ... .....+..     +.    ....
T Consensus       171 ~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ell~g~~p~~~~~~~--~~~-~~~~~~~~-----~~----~~~~  238 (285)
T cd06648         171 RRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGEPPYFNEPPL--QAM-KRIRDNLP-----PK----LKNL  238 (285)
T ss_pred             ccccccCCccccCHHHhcCCCCCCcccHHHHHHHHHHHHhCCCCCcCCCHH--HHH-HHHHhcCC-----CC----Cccc
Confidence            222356899999999998888999999999999999999999999764321  111 11111100     00    0011


Q ss_pred             HHHHHHHHHHHHHcCCCCCCCCCCHHHHHH
Q 005257          605 EDEVERVLHLGLLCAYPDPRARPTMRQVVK  634 (705)
Q Consensus       605 ~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~  634 (705)
                      ......+.+++.+||+.+|++||++.++++
T Consensus       239 ~~~~~~l~~li~~~l~~~p~~Rpt~~~il~  268 (285)
T cd06648         239 HKVSPRLRSFLDRMLVRDPAQRATAAELLN  268 (285)
T ss_pred             ccCCHHHHHHHHHHcccChhhCcCHHHHcc
Confidence            123457899999999999999999999986

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun

>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

Probab=100.00  E-value=6.8e-35  Score=307.93  Aligned_cols=251  Identities=24%  Similarity=0.385  Sum_probs=205.2

Q ss_pred             CCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCCchhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEEEEee
Q 005257          364 KGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDY  443 (705)
Q Consensus       364 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~lV~E~  443 (705)
                      ++|...+.||+|+||.||++....++..||+|.+........+.+.+|+.++++++|||++++++.+.. .+..++|+||
T Consensus        19 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~-~~~~~lv~e~   97 (293)
T cd06647          19 KKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQPKKELIINEILVMRENKHPNIVNYLDSYLV-GDELWVVMEY   97 (293)
T ss_pred             hhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEeccccchHHHHHHHHHHHHhhcCCCCeeehhheeee-CCcEEEEEec
Confidence            578889999999999999999888889999999876555556788999999999999999999998876 6688999999


Q ss_pred             CCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecCCCCc
Q 005257          444 MENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQV  523 (705)
Q Consensus       444 ~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~~~~~  523 (705)
                      +++++|.+++.+.    .+++.++..++.|++.||.|||+   .+++|+||||+||+++.++.+||+|||++........
T Consensus        98 ~~~~~L~~~~~~~----~l~~~~~~~i~~~l~~al~~LH~---~gi~H~dL~p~Nili~~~~~~kL~dfg~~~~~~~~~~  170 (293)
T cd06647          98 LAGGSLTDVVTET----CMDEGQIAAVCRECLQALEFLHS---NQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS  170 (293)
T ss_pred             CCCCcHHHHHhhc----CCCHHHHHHHHHHHHHHHHHHHh---CCEeeccCCHHHEEEcCCCCEEEccCcceeccccccc
Confidence            9999999998642    47899999999999999999998   9999999999999999999999999999876544322


Q ss_pred             ceeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhHHHHHhhhcCCCC
Q 005257          524 ASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRAKGGF  603 (705)
Q Consensus       524 ~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~l~~~~~~  603 (705)
                       ......|++.|+|||.+....++.++|||||||++||+++|+.||......  +.+......+.          .....
T Consensus       171 -~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~--~~~~~~~~~~~----------~~~~~  237 (293)
T cd06647         171 -KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPL--RALYLIATNGT----------PELQN  237 (293)
T ss_pred             -ccccccCChhhcCchhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChh--hheeehhcCCC----------CCCCC
Confidence             122346889999999998888999999999999999999999999754321  11111100000          00111


Q ss_pred             CHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 005257          604 DEDEVERVLHLGLLCAYPDPRARPTMRQVVKV  635 (705)
Q Consensus       604 ~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  635 (705)
                      .......+.+++..||..+|++||++.+++.+
T Consensus       238 ~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~h  269 (293)
T cd06647         238 PEKLSAIFRDFLNRCLEMDVEKRGSAKELLQH  269 (293)
T ss_pred             ccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence            22234568889999999999999999999875

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi

>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]

Probab=100.00  E-value=2.6e-35  Score=303.58  Aligned_cols=252  Identities=24%  Similarity=0.289  Sum_probs=204.4

Q ss_pred             CCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCC---chhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEEEEe
Q 005257          366 FSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHEN---DGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYD  442 (705)
Q Consensus       366 f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~---~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~lV~E  442 (705)
                      |+..+.||+|.-|+||++.+++++..+|+|++.+..   .........|-+||+.++||.+..|++.+.. +...|||||
T Consensus        79 f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~fet-~~~~cl~me  157 (459)
T KOG0610|consen   79 FRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTLYASFET-DKYSCLVME  157 (459)
T ss_pred             HHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchhhheeec-cceeEEEEe
Confidence            445678999999999999999999999999998763   3334556779999999999999999998876 678899999


Q ss_pred             eCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecCC--
Q 005257          443 YMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGH--  520 (705)
Q Consensus       443 ~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~~--  520 (705)
                      ||+||+|..++++...+ .+++..++-++.+|+.||+|||-   .|||.|||||+||||.++|++.|+||.|+....-  
T Consensus       158 yCpGGdL~~LrqkQp~~-~fse~~aRFYaAEvl~ALEYLHm---lGivYRDLKPENILvredGHIMLsDFDLS~~~~~~P  233 (459)
T KOG0610|consen  158 YCPGGDLHSLRQKQPGK-RFSESAARFYAAEVLLALEYLHM---LGIVYRDLKPENILVREDGHIMLSDFDLSLRCPVSP  233 (459)
T ss_pred             cCCCccHHHHHhhCCCC-ccchhhHHHHHHHHHHHHHHHHh---hceeeccCCcceeEEecCCcEEeeeccccccCCCCC
Confidence            99999999988776554 89999999999999999999998   9999999999999999999999999998742210  


Q ss_pred             -------------------------------CCc----------------------ceeeeeeccccCCCccccccCCCC
Q 005257          521 -------------------------------GQV----------------------ASTTRVVGTVGYLAPEVFSSGRAS  547 (705)
Q Consensus       521 -------------------------------~~~----------------------~~~~~~~gt~~y~APE~~~~~~~s  547 (705)
                                                     ...                      .....++||-.|.|||++.+...+
T Consensus       234 t~~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThEYlAPEvI~G~GHg  313 (459)
T KOG0610|consen  234 TLVKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTHEYLAPEVIRGEGHG  313 (459)
T ss_pred             eeeccCCCCCCCCCcccccccccccccchhccccccccccccccccchhhhcCCCCccccccccccccccceeeecCCCC
Confidence                                           000                      012236899999999999999999


Q ss_pred             ccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhHHHHHhhhcCCCCCHHHHHHHHHHHHHcCCCCCCCCC
Q 005257          548 TQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRAKGGFDEDEVERVLHLGLLCAYPDPRARP  627 (705)
Q Consensus       548 ~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP  627 (705)
                      .++|.|+|||++|||+.|+.||.+.....           .+...+-..+.- . -.+.....+.+|++..|.+||++|-
T Consensus       314 sAVDWWtfGIflYEmLyG~TPFKG~~~~~-----------Tl~NIv~~~l~F-p-~~~~vs~~akDLIr~LLvKdP~kRl  380 (459)
T KOG0610|consen  314 SAVDWWTFGIFLYEMLYGTTPFKGSNNKE-----------TLRNIVGQPLKF-P-EEPEVSSAAKDLIRKLLVKDPSKRL  380 (459)
T ss_pred             chhhHHHHHHHHHHHHhCCCCcCCCCchh-----------hHHHHhcCCCcC-C-CCCcchhHHHHHHHHHhccChhhhh
Confidence            99999999999999999999998765321           111222222221 1 1124556789999999999999998


Q ss_pred             C----HHHHHHH
Q 005257          628 T----MRQVVKV  635 (705)
Q Consensus       628 s----~~evl~~  635 (705)
                      -    +.||.++
T Consensus       381 g~~rGA~eIK~H  392 (459)
T KOG0610|consen  381 GSKRGAAEIKRH  392 (459)
T ss_pred             ccccchHHhhcC
Confidence            7    7777663

>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

Probab=100.00  E-value=1.3e-34  Score=302.84  Aligned_cols=247  Identities=26%  Similarity=0.426  Sum_probs=202.1

Q ss_pred             CCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCC-chhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEEEEeeC
Q 005257          366 FSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHEN-DGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYM  444 (705)
Q Consensus       366 f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~-~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~lV~E~~  444 (705)
                      |+..+.||+|+||.||+|....++..+|+|.+.... ....+.+.+|++++.+++||||+++++.+.. +...++||||+
T Consensus         6 ~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~lv~e~~   84 (277)
T cd06641           6 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLK-DTKLWIIMEYL   84 (277)
T ss_pred             hhhheeEeecCCeEEEEEEECCCCcEEEEEEeccccchHHHHHHHHHHHHHHhcCCCCEeEEEEEEEe-CCeEEEEEEeC
Confidence            667889999999999999998889999999886443 3345678899999999999999999998876 67889999999


Q ss_pred             CCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecCCCCcc
Q 005257          445 ENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVA  524 (705)
Q Consensus       445 ~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~~~~~~  524 (705)
                      ++++|.+++..    ..+++..+..++.|++.||.|||+   .+++|+||||+||+++.++.++|+|||++........ 
T Consensus        85 ~~~~l~~~i~~----~~~~~~~~~~~~~~l~~~l~~lh~---~~i~h~dl~p~Ni~i~~~~~~~l~dfg~~~~~~~~~~-  156 (277)
T cd06641          85 GGGSALDLLEP----GPLDETQIATILREILKGLDYLHS---EKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQI-  156 (277)
T ss_pred             CCCcHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHcc---CCeecCCCCHHhEEECCCCCEEEeecccceecccchh-
Confidence            99999999853    258999999999999999999998   9999999999999999999999999999876543322 


Q ss_pred             eeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhHHHHHhhhcCCCCC
Q 005257          525 STTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRAKGGFD  604 (705)
Q Consensus       525 ~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~l~~~~~~~  604 (705)
                      ......|+..|+|||.+.+...+.++|||||||++|||++|..||......  ... ..+..+.         .  ....
T Consensus       157 ~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~--~~~-~~~~~~~---------~--~~~~  222 (277)
T cd06641         157 KRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELAKGEPPHSELHPM--KVL-FLIPKNN---------P--PTLE  222 (277)
T ss_pred             hhccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHcCCCCCCccchH--HHH-HHHhcCC---------C--CCCC
Confidence            122346788999999998888899999999999999999999999754321  111 1111110         0  1122


Q ss_pred             HHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 005257          605 EDEVERVLHLGLLCAYPDPRARPTMRQVVKV  635 (705)
Q Consensus       605 ~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  635 (705)
                      ......+.+++..||+.+|++||++.+++++
T Consensus       223 ~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~  253 (277)
T cd06641         223 GNYSKPLKEFVEACLNKEPSFRPTAKELLKH  253 (277)
T ss_pred             cccCHHHHHHHHHHccCChhhCcCHHHHHhC
Confidence            3344668889999999999999999999984

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int

>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

Probab=100.00  E-value=1.5e-34  Score=299.45  Aligned_cols=243  Identities=26%  Similarity=0.361  Sum_probs=198.6

Q ss_pred             EeecCceEEEEEEEcCCCeEEEEEEeccCC---chhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEEEEeeCCCCC
Q 005257          372 IGVGGNGKVYKGVLEGGGAEIAVKRISHEN---DGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGS  448 (705)
Q Consensus       372 LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~---~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~lV~E~~~~gs  448 (705)
                      ||.|++|.||+++...+++.+|+|++....   ....+.+.+|+++++.++||||+++++.+.. +...++|+||+++++
T Consensus         1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~lv~e~~~~~~   79 (262)
T cd05572           1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRTFKD-KKYIYMLMEYCLGGE   79 (262)
T ss_pred             CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEEc-CCccEEEEecCCCCc
Confidence            689999999999999889999999986542   2345678999999999999999999998875 678999999999999


Q ss_pred             hhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecCCCCcceeee
Q 005257          449 LDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTR  528 (705)
Q Consensus       449 L~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~~~~~~~~~~  528 (705)
                      |.+++.+..   .+++..+..++.|++.||.|||+   .+++|+||+|+||+++.++.+||+|||++.......  ....
T Consensus        80 L~~~l~~~~---~l~~~~~~~~~~~i~~~l~~lH~---~~~~h~dl~~~nilv~~~~~~~l~df~~~~~~~~~~--~~~~  151 (262)
T cd05572          80 LWTILRDRG---LFDEYTARFYIACVVLAFEYLHN---RGIIYRDLKPENLLLDSNGYVKLVDFGFAKKLKSGQ--KTWT  151 (262)
T ss_pred             HHHHHhhcC---CCCHHHHHHHHHHHHHHHHHHhh---CCcccCCCCHHHEEEcCCCCEEEeeCCcccccCccc--cccc
Confidence            999997543   58999999999999999999998   999999999999999999999999999998765432  2223


Q ss_pred             eeccccCCCccccccCCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhHHHHHhhhcCCCCCHHHH
Q 005257          529 VVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRAKGGFDEDEV  608 (705)
Q Consensus       529 ~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~l~~~~~~~~~~~  608 (705)
                      ..|+..|++||.+....++.++|+||||+++|||++|..||.....+..+.. ..+..+          .....++....
T Consensus       152 ~~~~~~~~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~-~~~~~~----------~~~~~~~~~~~  220 (262)
T cd05572         152 FCGTPEYVAPEIILNKGYDFSVDYWSLGILLYELLTGRPPFGEDDEDPMEIY-NDILKG----------NGKLEFPNYID  220 (262)
T ss_pred             ccCCcCccChhHhcCCCCCChhhhhhhHHHHHHHHhCCCCcCCCCCCHHHHH-HHHhcc----------CCCCCCCcccC
Confidence            4688999999999888899999999999999999999999976543222211 111100          01122333335


Q ss_pred             HHHHHHHHHcCCCCCCCCCC-----HHHHHH
Q 005257          609 ERVLHLGLLCAYPDPRARPT-----MRQVVK  634 (705)
Q Consensus       609 ~~l~~l~~~Cl~~dP~~RPs-----~~evl~  634 (705)
                      ..+.+++..||+.+|++||+     ++|+++
T Consensus       221 ~~~~~~i~~~l~~~p~~R~~~~~~~~~~l~~  251 (262)
T cd05572         221 KAAKDLIKQLLRRNPEERLGNLKGGIKDIKK  251 (262)
T ss_pred             HHHHHHHHHHccCChhhCcCCcccCHHHHhc
Confidence            67899999999999999999     666665

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi

>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

Probab=100.00  E-value=5.8e-35  Score=301.03  Aligned_cols=251  Identities=27%  Similarity=0.438  Sum_probs=203.4

Q ss_pred             CCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCC--chhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEEEEe
Q 005257          365 GFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHEN--DGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYD  442 (705)
Q Consensus       365 ~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~--~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~lV~E  442 (705)
                      +|...+.||+|+||.||+|..+.++..+|+|.+....  ....+.+.+|+.+++.++|+||+++++.+.. ....++|+|
T Consensus         1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~h~~i~~~~~~~~~-~~~~~lv~e   79 (257)
T cd08225           1 RYEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPNIVTFFASFQE-NGRLFIVME   79 (257)
T ss_pred             CceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhccchhhHHHHHHHHHHHhCCCCChhhhhheecc-CCeEEEEEe
Confidence            4778899999999999999999989999999986542  2345678899999999999999999998876 678999999


Q ss_pred             eCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCC-CeeeeeeccceecCCC
Q 005257          443 YMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEM-NGRLGDFGLARMHGHG  521 (705)
Q Consensus       443 ~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~-~~kL~DFGla~~~~~~  521 (705)
                      |+++++|.+++...... .+++..+..++.|++.||.|||+   .+++|+||||+||++++++ .+||+|||.+......
T Consensus        80 ~~~~~~L~~~~~~~~~~-~~~~~~~~~~~~~l~~~l~~lh~---~~i~H~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~  155 (257)
T cd08225          80 YCDGGDLMKRINRQRGV-LFSEDQILSWFVQISLGLKHIHD---RKILHRDIKSQNIFLSKNGMVAKLGDFGIARQLNDS  155 (257)
T ss_pred             cCCCCcHHHHHHhccCC-CCCHHHHHHHHHHHHHHHHHHHH---CCcccccCCHHHEEEcCCCCeEEecccccchhccCC
Confidence            99999999999764432 58999999999999999999998   9999999999999999885 4699999999766543


Q ss_pred             CcceeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhHHHHHhhhcCC
Q 005257          522 QVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRAKG  601 (705)
Q Consensus       522 ~~~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~l~~~~  601 (705)
                      .. ......|++.|+|||++.+..++.++||||||+++|||++|+.||....  ..+.+.+.. .+..           .
T Consensus       156 ~~-~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~--~~~~~~~~~-~~~~-----------~  220 (257)
T cd08225         156 ME-LAYTCVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELCTLKHPFEGNN--LHQLVLKIC-QGYF-----------A  220 (257)
T ss_pred             cc-cccccCCCccccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCcc--HHHHHHHHh-cccC-----------C
Confidence            22 1223468899999999988889999999999999999999999997543  222222211 1110           1


Q ss_pred             CCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 005257          602 GFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKV  635 (705)
Q Consensus       602 ~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  635 (705)
                      .........+.+++.+||..+|++||++.++++.
T Consensus       221 ~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~  254 (257)
T cd08225         221 PISPNFSRDLRSLISQLFKVSPRDRPSITSILKR  254 (257)
T ss_pred             CCCCCCCHHHHHHHHHHhccChhhCcCHHHHhhC
Confidence            1122234568899999999999999999999864

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.

>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

Probab=100.00  E-value=4.4e-34  Score=303.65  Aligned_cols=249  Identities=25%  Similarity=0.359  Sum_probs=199.8

Q ss_pred             hCCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCC---chhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEE
Q 005257          363 TKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHEN---DGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLML  439 (705)
Q Consensus       363 t~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~---~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~l  439 (705)
                      .+.|...+.||+|+||.||+|....+++.||+|++....   ....+++.+|+++++.++|||++++.++|.. ++..++
T Consensus        14 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~-~~~~~l   92 (307)
T cd06607          14 EKLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYLR-EHTAWL   92 (307)
T ss_pred             chhhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEEe-CCeEEE
Confidence            356888899999999999999998889999999986442   2344678999999999999999999999886 667899


Q ss_pred             EEeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecC
Q 005257          440 VYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHG  519 (705)
Q Consensus       440 V~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~  519 (705)
                      |+||++ |+|.+++.....  .+++.++..++.|++.||.|||+   .+++||||+|+||++++++.+||+|||++....
T Consensus        93 v~e~~~-g~l~~~~~~~~~--~l~~~~~~~~~~ql~~~L~~LH~---~~i~H~dl~p~nIl~~~~~~~kL~dfg~~~~~~  166 (307)
T cd06607          93 VMEYCL-GSASDILEVHKK--PLQEVEIAAICHGALQGLAYLHS---HERIHRDIKAGNILLTEPGTVKLADFGSASLVS  166 (307)
T ss_pred             EHHhhC-CCHHHHHHHccc--CCCHHHHHHHHHHHHHHHHHHHH---CCceecCCCcccEEECCCCCEEEeecCcceecC
Confidence            999997 577777754332  58999999999999999999998   999999999999999999999999999987654


Q ss_pred             CCCcceeeeeeccccCCCccccc---cCCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhHHHHHh
Q 005257          520 HGQVASTTRVVGTVGYLAPEVFS---SGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDAR  596 (705)
Q Consensus       520 ~~~~~~~~~~~gt~~y~APE~~~---~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~  596 (705)
                      ..     ....|+..|+|||++.   ...++.++||||||+++|||++|+.||......  ....... ....       
T Consensus       167 ~~-----~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~~~--~~~~~~~-~~~~-------  231 (307)
T cd06607         167 PA-----NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAM--SALYHIA-QNDS-------  231 (307)
T ss_pred             CC-----CCccCCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCCccHH--HHHHHHh-cCCC-------
Confidence            32     2246788999999874   356889999999999999999999998754321  1111110 0000       


Q ss_pred             hhcCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Q 005257          597 LRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVL  636 (705)
Q Consensus       597 l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L  636 (705)
                       .  ..........+.+++..||+.+|++||++.+++.+.
T Consensus       232 -~--~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~  268 (307)
T cd06607         232 -P--TLSSNDWSDYFRNFVDSCLQKIPQDRPSSEELLKHR  268 (307)
T ss_pred             -C--CCCchhhCHHHHHHHHHHhcCChhhCcCHHHHhcCh
Confidence             0  111223456789999999999999999999998854

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily

>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases

Probab=100.00  E-value=1.9e-34  Score=294.95  Aligned_cols=251  Identities=28%  Similarity=0.434  Sum_probs=206.3

Q ss_pred             CCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCCchhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEEEEeeC
Q 005257          365 GFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYM  444 (705)
Q Consensus       365 ~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~lV~E~~  444 (705)
                      .|...+.||+|++|.||++....+++.+++|++........+.+.+|++++++++|||++++++.+.. ....++++||+
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~~l~~e~~   79 (253)
T cd05122           1 LFEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKCKHPNIVKYYGSYLK-KDELWIVMEFC   79 (253)
T ss_pred             CceeeeeeccCCceEEEEEEECCCCcEEEEEEecccchhHHHHHHHHHHHHHhCCCCCEeEEEEEEec-CCeEEEEEecC
Confidence            36778899999999999999988899999999977655567789999999999999999999998876 57889999999


Q ss_pred             CCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecCCCCcc
Q 005257          445 ENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVA  524 (705)
Q Consensus       445 ~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~~~~~~  524 (705)
                      ++++|.+++....  ..+++.++..++.|++.||.|||+   .+++|+||+|+||++++++.++|+|||.+........ 
T Consensus        80 ~~~~L~~~~~~~~--~~~~~~~~~~i~~~i~~~l~~lh~---~~i~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~-  153 (253)
T cd05122          80 SGGSLKDLLKSTN--QTLTESQIAYVCKELLKGLEYLHS---NGIIHRDIKAANILLTSDGEVKLIDFGLSAQLSDTKA-  153 (253)
T ss_pred             CCCcHHHHHhhcC--CCCCHHHHHHHHHHHHHHHHHhhc---CCEecCCCCHHHEEEccCCeEEEeecccccccccccc-
Confidence            9999999987643  368999999999999999999998   9999999999999999999999999999987655432 


Q ss_pred             eeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhHHHHHhhhcCCCCC
Q 005257          525 STTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRAKGGFD  604 (705)
Q Consensus       525 ~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~l~~~~~~~  604 (705)
                       .....|+..|+|||.+....++.++||||||++++||++|+.||......  ..... ....         ........
T Consensus       154 -~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~--~~~~~-~~~~---------~~~~~~~~  220 (253)
T cd05122         154 -RNTMVGTPYWMAPEVINGKPYDYKADIWSLGITAIELAEGKPPYSELPPM--KALFK-IATN---------GPPGLRNP  220 (253)
T ss_pred             -ccceecCCcccCHHHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCchH--HHHHH-HHhc---------CCCCcCcc
Confidence             23457889999999998888999999999999999999999999764321  11100 1000         00000011


Q ss_pred             HHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 005257          605 EDEVERVLHLGLLCAYPDPRARPTMRQVVKV  635 (705)
Q Consensus       605 ~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  635 (705)
                      ......+.+++..||+.||++|||+.+++++
T Consensus       221 ~~~~~~~~~~i~~~l~~~p~~R~t~~~~l~~  251 (253)
T cd05122         221 EKWSDEFKDFLKKCLQKNPEKRPTAEQLLKH  251 (253)
T ss_pred             cccCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence            1114678899999999999999999998863

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core

>PHA03207 serine/threonine kinase US3; Provisional

Probab=100.00  E-value=4.1e-35  Score=322.56  Aligned_cols=197  Identities=21%  Similarity=0.341  Sum_probs=168.6

Q ss_pred             CCCCcceEEeecCceEEEEEEEcC--CCeEEEEEEeccCCchhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEEEE
Q 005257          364 KGFSEENVIGVGGNGKVYKGVLEG--GGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVY  441 (705)
Q Consensus       364 ~~f~~~~~LG~G~fg~Vy~~~~~~--~~~~vavK~i~~~~~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~lV~  441 (705)
                      .+|...+.||+|+||.||++...+  .+..||+|.+...     +...+|++++++++||||+++++++.. ....++||
T Consensus        92 ~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~-----~~~~~E~~il~~l~h~~iv~~~~~~~~-~~~~~lv~  165 (392)
T PHA03207         92 MQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGG-----KTPGREIDILKTISHRAIINLIHAYRW-KSTVCMVM  165 (392)
T ss_pred             CceEEEEeecCCCCeEEEEEEEcCCccceeEEEEecccc-----ccHHHHHHHHHhcCCCCccceeeeEee-CCEEEEEe
Confidence            468889999999999999998643  4578999987543     235689999999999999999998875 66889999


Q ss_pred             eeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecCCC
Q 005257          442 DYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHG  521 (705)
Q Consensus       442 E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~~~  521 (705)
                      |++. ++|.+++...   ..+++.+++.++.|++.||.|||+   ++|+||||||+|||++.++.+||+|||+++.....
T Consensus       166 e~~~-~~l~~~l~~~---~~l~~~~~~~i~~ql~~aL~~LH~---~givHrDlkp~Nill~~~~~~~l~DfG~a~~~~~~  238 (392)
T PHA03207        166 PKYK-CDLFTYVDRS---GPLPLEQAITIQRRLLEALAYLHG---RGIIHRDVKTENIFLDEPENAVLGDFGAACKLDAH  238 (392)
T ss_pred             hhcC-CCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCCHHHEEEcCCCCEEEccCccccccCcc
Confidence            9996 6888888432   269999999999999999999998   99999999999999999999999999999765443


Q ss_pred             Cc-ceeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhhCCCCCCCCC
Q 005257          522 QV-ASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGK  573 (705)
Q Consensus       522 ~~-~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~  573 (705)
                      .. .......||+.|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus       239 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~  291 (392)
T PHA03207        239 PDTPQCYGWSGTLETNSPELLALDPYCAKTDIWSAGLVLFEMSVKNVTLFGKQ  291 (392)
T ss_pred             cccccccccccccCccCHhHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCC
Confidence            22 22234679999999999998899999999999999999999999997643

>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=4.2e-35  Score=306.66  Aligned_cols=248  Identities=21%  Similarity=0.346  Sum_probs=210.4

Q ss_pred             CCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCC--chhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEEEEe
Q 005257          365 GFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHEN--DGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYD  442 (705)
Q Consensus       365 ~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~--~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~lV~E  442 (705)
                      =|..++.||+|.|..|-++++--+|+.||||++.+..  .-....+.+|++.|+-++|||||+++.+... ...+|||.|
T Consensus        19 LYDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~st~hlfqEVRCMKLVQHpNiVRLYEViDT-QTKlyLiLE   97 (864)
T KOG4717|consen   19 LYDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLVQHPNIVRLYEVIDT-QTKLYLILE   97 (864)
T ss_pred             eehhhhhhcCCceehhhhhhhhcccceeEEEEecccccchhhhhHHHHHHHHHHHhcCcCeeeeeehhcc-cceEEEEEE
Confidence            4677888999999999999999999999999997653  2344578899999999999999999998765 778999999


Q ss_pred             eCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEc-cCCCeeeeeeccceecCCC
Q 005257          443 YMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLD-KEMNGRLGDFGLARMHGHG  521 (705)
Q Consensus       443 ~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld-~~~~~kL~DFGla~~~~~~  521 (705)
                      .-.+|+|.+||.+...  .+.+....+++.||+.|+.|+|.   ..+|||||||+||.+- .-|-+||.|||++..+.++
T Consensus        98 LGD~GDl~DyImKHe~--Gl~E~La~kYF~QI~~AI~YCHq---LHVVHRDLKPENVVFFEKlGlVKLTDFGFSNkf~PG  172 (864)
T KOG4717|consen   98 LGDGGDLFDYIMKHEE--GLNEDLAKKYFAQIVHAISYCHQ---LHVVHRDLKPENVVFFEKLGLVKLTDFGFSNKFQPG  172 (864)
T ss_pred             ecCCchHHHHHHhhhc--cccHHHHHHHHHHHHHHHHHHhh---hhhhcccCCcceeEEeeecCceEeeeccccccCCCc
Confidence            9999999999987655  59999999999999999999998   9999999999998764 5688999999999988776


Q ss_pred             CcceeeeeeccccCCCccccccCCCC-ccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhHHHHHhhhcC
Q 005257          522 QVASTTRVVGTVGYLAPEVFSSGRAS-TQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRAK  600 (705)
Q Consensus       522 ~~~~~~~~~gt~~y~APE~~~~~~~s-~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~l~~~  600 (705)
                      ...  +..+|+..|-|||++.+..|+ +++|||||||+||-|+||+.||+.....               +.+-..+-.+
T Consensus       173 ~kL--~TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeANDS---------------ETLTmImDCK  235 (864)
T KOG4717|consen  173 KKL--TTSCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEANDS---------------ETLTMIMDCK  235 (864)
T ss_pred             chh--hcccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCccccccch---------------hhhhhhhccc
Confidence            543  446999999999999998775 6899999999999999999999865432               1111112222


Q ss_pred             CCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 005257          601 GGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKV  635 (705)
Q Consensus       601 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  635 (705)
                      ...+.....+..+|+..++..||.+|.+.++|...
T Consensus       236 YtvPshvS~eCrdLI~sMLvRdPkkRAslEeI~s~  270 (864)
T KOG4717|consen  236 YTVPSHVSKECRDLIQSMLVRDPKKRASLEEIVST  270 (864)
T ss_pred             ccCchhhhHHHHHHHHHHHhcCchhhccHHHHhcc
Confidence            44566677788999999999999999999999763

>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

Probab=100.00  E-value=1.1e-34  Score=312.52  Aligned_cols=264  Identities=25%  Similarity=0.343  Sum_probs=199.6

Q ss_pred             hCCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccC-CchhHHHHHHHHHHhccCCCCCcceeeeeeeecc----Cce
Q 005257          363 TKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHE-NDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREK----GSL  437 (705)
Q Consensus       363 t~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~-~~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~----~~~  437 (705)
                      +++|...+.||+|+||.||+|.+..+++.||||++... .......+.+|+.++++++||||+++++++....    ...
T Consensus         4 ~~~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~   83 (336)
T cd07849           4 GPRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEHQTFCQRTLREIKILRRFKHENIIGILDIIRPPSFESFNDV   83 (336)
T ss_pred             ccceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEecccccchhHHHHHHHHHHHHhCCCCCcCchhheeecccccccceE
Confidence            46899999999999999999999989999999998643 2334567889999999999999999999875422    357


Q ss_pred             EEEEeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeecccee
Q 005257          438 MLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARM  517 (705)
Q Consensus       438 ~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~  517 (705)
                      ++|+||+++ +|.+++..    ..+++..+..++.|++.||.|||+   .+|+||||||+||+++.++.+||+|||+++.
T Consensus        84 ~lv~e~~~~-~l~~~~~~----~~l~~~~~~~i~~ql~~aL~~LH~---~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~  155 (336)
T cd07849          84 YIVQELMET-DLYKLIKT----QHLSNDHIQYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTNCDLKICDFGLARI  155 (336)
T ss_pred             EEEehhccc-CHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHh---CCeeccCCCHHHEEECCCCCEEECcccceee
Confidence            999999975 88777743    268999999999999999999998   9999999999999999999999999999986


Q ss_pred             cCCCCcc--eeeeeeccccCCCcccccc-CCCCccccEEEEehhHHHHhhCCCCCCCCCcc-HHHHHHHHHHhCchhHHH
Q 005257          518 HGHGQVA--STTRVVGTVGYLAPEVFSS-GRASTQTDVFGFGILILEVLSGRRPIEEGKPN-LVEMVWELMVQGKLLDAL  593 (705)
Q Consensus       518 ~~~~~~~--~~~~~~gt~~y~APE~~~~-~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~-~~~~v~~~~~~~~~~~~i  593 (705)
                      .......  ......|++.|+|||.+.+ ..++.++|||||||++|||++|+.||...... ....+....... ..+..
T Consensus       156 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el~~G~~~f~~~~~~~~~~~~~~~~~~~-~~~~~  234 (336)
T cd07849         156 ADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGKDYLHQLNLILGVLGTP-SQEDL  234 (336)
T ss_pred             ccccccccCCcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCC-CHHHH
Confidence            5432211  1223568999999998754 46899999999999999999999999754321 011111111100 00100


Q ss_pred             HH-----------hhhcCCCCC-----HHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 005257          594 DA-----------RLRAKGGFD-----EDEVERVLHLGLLCAYPDPRARPTMRQVVKV  635 (705)
Q Consensus       594 d~-----------~l~~~~~~~-----~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  635 (705)
                      +.           ........+     +.....+.+++..||+.+|++||++.|++++
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~e~l~h  292 (336)
T cd07849         235 NCIISLRARNYIKSLPFKPKVPWNKLFPNADPKALDLLDKMLTFNPHKRITVEEALAH  292 (336)
T ss_pred             HHhhchhhhhHHhhcCcCCcccHHHHhcccCcHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence            00           000000000     1123568899999999999999999999886

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase

>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]

Probab=100.00  E-value=8.9e-36  Score=295.76  Aligned_cols=292  Identities=25%  Similarity=0.359  Sum_probs=214.8

Q ss_pred             CCCcceEEeecCceEEEEEEEcCCC----eEEEEEEeccCCc--hhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceE
Q 005257          365 GFSEENVIGVGGNGKVYKGVLEGGG----AEIAVKRISHEND--GGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLM  438 (705)
Q Consensus       365 ~f~~~~~LG~G~fg~Vy~~~~~~~~----~~vavK~i~~~~~--~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~  438 (705)
                      .|+....||+|.||.||||.-.+++    +.+|||+++.+.+  .-...-.+|+.++++|+|||++.+..++...+..++
T Consensus        25 ~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl~~d~~v~  104 (438)
T KOG0666|consen   25 EYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLRELKHPNVISLVKVFLSHDKKVW  104 (438)
T ss_pred             HhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHhcCCcchhHHHHHhccCceEE
Confidence            4777889999999999999765443    3789999976633  334567899999999999999999999887678899


Q ss_pred             EEEeeCCCCChhHHHHhc--CCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccC----CCeeeeee
Q 005257          439 LVYDYMENGSLDKWIFQC--DGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKE----MNGRLGDF  512 (705)
Q Consensus       439 lV~E~~~~gsL~~~L~~~--~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~----~~~kL~DF  512 (705)
                      +++||.+. +|...++..  .....++...+.+|+.||+.|+.|||+   +=|+||||||.|||+..+    |.+||+|+
T Consensus       105 l~fdYAEh-DL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~---NWvlHRDLKPaNIlvmgdgperG~VKIaDl  180 (438)
T KOG0666|consen  105 LLFDYAEH-DLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHS---NWVLHRDLKPANILVMGDGPERGRVKIADL  180 (438)
T ss_pred             EEehhhhh-hHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhh---hheeeccCCcceEEEeccCCccCeeEeecc
Confidence            99999987 888888643  223479999999999999999999998   889999999999999877    89999999


Q ss_pred             ccceecCCCCcce--eeeeeccccCCCccccccC-CCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCch
Q 005257          513 GLARMHGHGQVAS--TTRVVGTVGYLAPEVFSSG-RASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKL  589 (705)
Q Consensus       513 Gla~~~~~~~~~~--~~~~~gt~~y~APE~~~~~-~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~  589 (705)
                      |++|.+...-.+.  ...++-|.+|+|||.+.+. .||.+.|||+.||++.||+|-++.|.+....              
T Consensus       181 GlaR~~~~plkpl~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIfaElLtl~PlF~g~E~k--------------  246 (438)
T KOG0666|consen  181 GLARLFNNPLKPLASLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGCIFAELLTLEPLFKGREEK--------------  246 (438)
T ss_pred             cHHHHhhccccccccCCceEEEEEecChHHhcccccccchhhhHHHHHHHHHHHccCccccchhhh--------------
Confidence            9999887654322  3346779999999999874 6899999999999999999998888764321              


Q ss_pred             hHHHHHhhhcCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHH------HHHHHHHhccccCC------CCCcchhhHHHHH
Q 005257          590 LDALDARLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMR------QVVKVLEGKIEAGI------ENETEDMDAYLLQ  657 (705)
Q Consensus       590 ~~~id~~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~------evl~~L~~~~~~~~------~~~~~~~~~~~~~  657 (705)
                             +..+..+..+++.++.+++-   .+.-++-|.++      ..++.++...-...      ..-... +..-++
T Consensus       247 -------~~~~~Pfq~dQl~rIf~vLG---~Pt~~~Wp~lkk~Pe~q~~ls~f~~~~~~n~sL~~~~~~~k~k-~~~a~~  315 (438)
T KOG0666|consen  247 -------IKTKNPFQHDQLDRIFEVLG---TPTDKDWPDLKKMPEYQTLLSDFRRHYYDNVSLHKYYHKHKVK-DPSALD  315 (438)
T ss_pred             -------cccCCCchHHHHHHHHHHcC---CCccccchhhhhCcchHHHHHHhHHhhcCcchHHHHHHHhcCC-CchHHH
Confidence                   11112344444444444432   23333333333      33333331111000      000001 111456


Q ss_pred             HhhccccccccccccccCCCCCCCcccc
Q 005257          658 QVKSKDMWANYSRSFGYGYATHPTFHDI  685 (705)
Q Consensus       658 ~~~~~~~~~~~~r~~~~~~~~hp~f~~~  685 (705)
                      ++.++..++|-+|.++.+|+.||||.+-
T Consensus       316 LL~klL~yDP~kRIta~qAleh~yF~~d  343 (438)
T KOG0666|consen  316 LLQKLLTYDPIKRITAEQALEHPYFTED  343 (438)
T ss_pred             HHHHHhccCchhhccHHHHhcccccccC
Confidence            6777778999999999999999999654

>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]

Probab=100.00  E-value=1.9e-35  Score=288.91  Aligned_cols=270  Identities=22%  Similarity=0.355  Sum_probs=208.5

Q ss_pred             ceEEeecCceEEEEEEEcCCCeEEEEEEeccC-CchhHHHHHHHHHHhccCC-CCCcceeeeeeeeccCceEEEEeeCCC
Q 005257          369 ENVIGVGGNGKVYKGVLEGGGAEIAVKRISHE-NDGGTRAFLAEISSLGRLK-HKSLVGLRGWCKREKGSLMLVYDYMEN  446 (705)
Q Consensus       369 ~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~-~~~~~~~~~~Ei~~l~~l~-Hpniv~l~g~~~~~~~~~~lV~E~~~~  446 (705)
                      ...||.|..|.|++++.+.+|..+|||.+.+. +.+..+.++..+.++..-. .|+||+.+|++.. +...++.||.|..
T Consensus        97 l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi~-n~dV~IcMelMs~  175 (391)
T KOG0983|consen   97 LGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVQCFGYFIT-NTDVFICMELMST  175 (391)
T ss_pred             HHhhcCCCccceEEEEEcccceEEEEEeecccCCHHHHHHHHHhhhHHhhccCCCeeeeeeeEEee-CchHHHHHHHHHH
Confidence            55699999999999999999999999999765 5667788889998877764 8999999999987 5677899999954


Q ss_pred             CChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecCCCCccee
Q 005257          447 GSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVAST  526 (705)
Q Consensus       447 gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~~~~~~~~  526 (705)
                       .++.+|+....  ++++.-+-++...+.+||.||.+  +++|||||+||+|||+|+.|++||||||++-.+-...  ..
T Consensus       176 -C~ekLlkrik~--piPE~ilGk~tva~v~AL~YLKe--KH~viHRDvKPSNILlDe~GniKlCDFGIsGrlvdSk--Ah  248 (391)
T KOG0983|consen  176 -CAEKLLKRIKG--PIPERILGKMTVAIVKALYYLKE--KHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSK--AH  248 (391)
T ss_pred             -HHHHHHHHhcC--CchHHhhhhhHHHHHHHHHHHHH--hcceeecccCccceEEccCCCEEeecccccceeeccc--cc
Confidence             77787776544  58888888999999999999998  7999999999999999999999999999997654433  23


Q ss_pred             eeeeccccCCCcccccc---CCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhHHHHHhhhcCCCC
Q 005257          527 TRVVGTVGYLAPEVFSS---GRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRAKGGF  603 (705)
Q Consensus       527 ~~~~gt~~y~APE~~~~---~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~l~~~~~~  603 (705)
                      +..+|-+.|||||.+.-   .+|+.++||||||+.|+||+||+.||..-+.++.  +...+.+..     .+.+....  
T Consensus       249 trsAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~tdFe--~ltkvln~e-----PP~L~~~~--  319 (391)
T KOG0983|consen  249 TRSAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGCKTDFE--VLTKVLNEE-----PPLLPGHM--  319 (391)
T ss_pred             ccccCCccccCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCCCCccHH--HHHHHHhcC-----CCCCCccc--
Confidence            44588999999999864   4688999999999999999999999987544321  122222211     12222111  


Q ss_pred             CHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHhccccCCCCCcchhhHHHHHHhh
Q 005257          604 DEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLEGKIEAGIENETEDMDAYLLQQVK  660 (705)
Q Consensus       604 ~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~~~~~~~~~~~~~~~~~~~~  660 (705)
                        .....+.+++..|++.|+.+||...+++++==  +. .-+....+...++.+.+.
T Consensus       320 --gFSp~F~~fv~~CL~kd~r~RP~Y~~Ll~h~F--i~-~ye~a~~dVa~WF~dV~~  371 (391)
T KOG0983|consen  320 --GFSPDFQSFVKDCLTKDHRKRPKYNKLLEHPF--IK-RYETAEVDVASWFKDVMA  371 (391)
T ss_pred             --CcCHHHHHHHHHHhhcCcccCcchHHHhcCcc--ee-ecchhhccHHHHHHHHHh
Confidence              23456888999999999999999999887421  11 222333455555555544

>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=1.6e-34  Score=301.73  Aligned_cols=248  Identities=24%  Similarity=0.421  Sum_probs=200.7

Q ss_pred             CCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccC-CchhHHHHHHHHHHhccCC---CCCcceeeeeeeeccCceEEE
Q 005257          365 GFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHE-NDGGTRAFLAEISSLGRLK---HKSLVGLRGWCKREKGSLMLV  440 (705)
Q Consensus       365 ~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~-~~~~~~~~~~Ei~~l~~l~---Hpniv~l~g~~~~~~~~~~lV  440 (705)
                      .|+..+.||+|+||.||+|.+..+++.+|+|.+... ......++.+|+.++++++   |||++++++++.. +...++|
T Consensus         2 ~y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~-~~~~~lv   80 (277)
T cd06917           2 LYQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDVSDIQREVALLSQLRQSQPPNITKYYGSYLK-GPRLWII   80 (277)
T ss_pred             hhhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCCCchhHHHHHHHHHHHHHhccCCCCCeeeEeeeeee-CCEEEEE
Confidence            467788899999999999999888999999998654 3344567889999999997   9999999998876 6788999


Q ss_pred             EeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecCC
Q 005257          441 YDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGH  520 (705)
Q Consensus       441 ~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~~  520 (705)
                      |||+++++|.+++...    .+++..+..++.|++.||.|||+   .+++|+||+|+||++++++.++|+|||++.....
T Consensus        81 ~e~~~~~~L~~~~~~~----~l~~~~~~~i~~~i~~~l~~lh~---~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~  153 (277)
T cd06917          81 MEYAEGGSVRTLMKAG----PIAEKYISVIIREVLVALKYIHK---VGVIHRDIKAANILVTNTGNVKLCDFGVAALLNQ  153 (277)
T ss_pred             EecCCCCcHHHHHHcc----CCCHHHHHHHHHHHHHHHHHHHh---CCcccCCcCHHHEEEcCCCCEEEccCCceeecCC
Confidence            9999999999988542    68999999999999999999998   9999999999999999999999999999987654


Q ss_pred             CCcceeeeeeccccCCCccccccC-CCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhHHHHHhhhc
Q 005257          521 GQVASTTRVVGTVGYLAPEVFSSG-RASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRA  599 (705)
Q Consensus       521 ~~~~~~~~~~gt~~y~APE~~~~~-~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~l~~  599 (705)
                      ... ......|+..|+|||.+.++ .++.++|||||||++|||++|+.||......  ... .......     .     
T Consensus       154 ~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~--~~~-~~~~~~~-----~-----  219 (277)
T cd06917         154 NSS-KRSTFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDVDAF--RAM-MLIPKSK-----P-----  219 (277)
T ss_pred             Ccc-ccccccCCcceeCHHHhccCCccccchhHHHHHHHHHHHHhCCCCCCCCChh--hhh-hccccCC-----C-----
Confidence            432 22334789999999998654 4689999999999999999999999754321  111 0000000     0     


Q ss_pred             CCCCCH-HHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 005257          600 KGGFDE-DEVERVLHLGLLCAYPDPRARPTMRQVVKV  635 (705)
Q Consensus       600 ~~~~~~-~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  635 (705)
                       ..... .....+.+++..||+.||++||++.++++.
T Consensus       220 -~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~il~~  255 (277)
T cd06917         220 -PRLEDNGYSKLLREFVAACLDEEPKERLSAEELLKS  255 (277)
T ss_pred             -CCCCcccCCHHHHHHHHHHcCCCcccCcCHHHHhhC
Confidence             11111 134568899999999999999999999874

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent

>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

Probab=100.00  E-value=2.9e-34  Score=300.62  Aligned_cols=262  Identities=28%  Similarity=0.404  Sum_probs=201.5

Q ss_pred             CCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCC--chhHHHHHHHHHHhccCCCCCcceeeeeeeec-cCceEEEEe
Q 005257          366 FSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHEN--DGGTRAFLAEISSLGRLKHKSLVGLRGWCKRE-KGSLMLVYD  442 (705)
Q Consensus       366 f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~--~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~-~~~~~lV~E  442 (705)
                      |...+.||+|++|.||+|....+++.+|+|++....  ....+.+.+|++++++++|||++++++++... .+..++|+|
T Consensus         1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e   80 (287)
T cd07840           1 YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSKGKGSIYMVFE   80 (287)
T ss_pred             CeeeEEeccCCCeEEEEEEECCCCeEEEEEEEecccccccchHHHHHHHHHHHhccCCCeeeheeeEecCCCCcEEEEec
Confidence            566789999999999999999889999999997653  34456788999999999999999999998763 268999999


Q ss_pred             eCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecCCCC
Q 005257          443 YMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQ  522 (705)
Q Consensus       443 ~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~~~~  522 (705)
                      |+++ +|.+++....  ..+++.+++.++.|++.||+|||+   .+++|+||||+||++++++.+||+|||++.......
T Consensus        81 ~~~~-~l~~~~~~~~--~~~~~~~~~~i~~~i~~al~~LH~---~~~~h~dl~p~nil~~~~~~~~l~d~g~~~~~~~~~  154 (287)
T cd07840          81 YMDH-DLTGLLDSPE--VKFTESQIKCYMKQLLEGLQYLHS---NGILHRDIKGSNILINNDGVLKLADFGLARPYTKRN  154 (287)
T ss_pred             cccc-cHHHHHhccC--CCCCHHHHHHHHHHHHHHHHHHHH---CCceeccCcHHHeEEcCCCCEEEccccceeeccCCC
Confidence            9975 8988886543  268999999999999999999998   899999999999999999999999999998775544


Q ss_pred             cceeeeeeccccCCCcccccc-CCCCccccEEEEehhHHHHhhCCCCCCCCCcc-HHHHHHHHHHhCch-----------
Q 005257          523 VASTTRVVGTVGYLAPEVFSS-GRASTQTDVFGFGILILEVLSGRRPIEEGKPN-LVEMVWELMVQGKL-----------  589 (705)
Q Consensus       523 ~~~~~~~~gt~~y~APE~~~~-~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~-~~~~v~~~~~~~~~-----------  589 (705)
                      ........++..|+|||.+.+ ..++.++||||||+++|||++|+.||...... ....+.........           
T Consensus       155 ~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (287)
T cd07840         155 SADYTNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGSTELEQLEKIFELCGSPTDENWPGVSKLPW  234 (287)
T ss_pred             cccccccccccccCCceeeEccccCChHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchhhccccccchh
Confidence            322333466889999998765 45789999999999999999999999764421 11111111000000           


Q ss_pred             ------hHHHHHhhhcCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 005257          590 ------LDALDARLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKV  635 (705)
Q Consensus       590 ------~~~id~~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  635 (705)
                            .......+.  ..+...+...+.+++..||+.+|++||++.++++.
T Consensus       235 ~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~  284 (287)
T cd07840         235 FENLKPKKPYKRRLR--EFFKHLIDPSALDLLDKLLTLDPKKRISADQALQH  284 (287)
T ss_pred             hhhccccccchhHHH--HHhcccCCHHHHHHHHHHcCCChhhCcCHHHHhhC
Confidence                  000000000  00011125678999999999999999999998863

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po

>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

Probab=100.00  E-value=3.6e-34  Score=294.16  Aligned_cols=253  Identities=26%  Similarity=0.431  Sum_probs=208.0

Q ss_pred             CCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCCc--hhHHHHHHHHHHhccCCCCCcceeeeeeeecc-CceEEEE
Q 005257          365 GFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHEND--GGTRAFLAEISSLGRLKHKSLVGLRGWCKREK-GSLMLVY  441 (705)
Q Consensus       365 ~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~--~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~-~~~~lV~  441 (705)
                      +|...+.||+|++|.||+|....++..|++|++.....  ...+.+.+|+.++++++||||+++++.+.... ...++++
T Consensus         1 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~   80 (260)
T cd06606           1 EWTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYYGSERDEEKNTLNIFL   80 (260)
T ss_pred             CceeeeEeeecCceEEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHHHHcCCCCEeeEEEEEecCCCCeEEEEE
Confidence            46778999999999999999998899999999876543  45678999999999999999999999887621 6789999


Q ss_pred             eeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecCCC
Q 005257          442 DYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHG  521 (705)
Q Consensus       442 E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~~~  521 (705)
                      ||+++++|.+++....   .+++.++..++.|++.||.|||+   .+++|+||+|+||+++.++.++|+|||.+......
T Consensus        81 e~~~~~~L~~~~~~~~---~~~~~~~~~~~~~l~~~l~~lh~---~~~~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~  154 (260)
T cd06606          81 EYVSGGSLSSLLKKFG---KLPEPVIRKYTRQILEGLAYLHS---NGIVHRDIKGANILVDSDGVVKLADFGCAKRLGDI  154 (260)
T ss_pred             EecCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHH---CCccccCCCHHHEEEcCCCCEEEcccccEEecccc
Confidence            9999999999997644   68999999999999999999998   99999999999999999999999999999877654


Q ss_pred             Ccc-eeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhHHHHHhhhcC
Q 005257          522 QVA-STTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRAK  600 (705)
Q Consensus       522 ~~~-~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~l~~~  600 (705)
                      ... ......++..|+|||.+.....+.++||||||++++||++|+.||..... .....+......           ..
T Consensus       155 ~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~-~~~~~~~~~~~~-----------~~  222 (260)
T cd06606         155 ETGEGTGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGKPPWSELGN-PMAALYKIGSSG-----------EP  222 (260)
T ss_pred             cccccccCCCCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCc-hHHHHHhccccC-----------CC
Confidence            321 12234678899999999888899999999999999999999999976541 111111111100           01


Q ss_pred             CCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 005257          601 GGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKV  635 (705)
Q Consensus       601 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  635 (705)
                      ...+......+.+++.+|++.+|++||++.++++.
T Consensus       223 ~~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~ll~~  257 (260)
T cd06606         223 PEIPEHLSEEAKDFLRKCLRRDPKKRPTADELLQH  257 (260)
T ss_pred             cCCCcccCHHHHHHHHHhCcCChhhCCCHHHHhhC
Confidence            22333445778999999999999999999999863

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK

>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

Probab=100.00  E-value=2.7e-34  Score=301.79  Aligned_cols=255  Identities=27%  Similarity=0.414  Sum_probs=207.1

Q ss_pred             HHhCCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCCchhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEEE
Q 005257          361 AATKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLV  440 (705)
Q Consensus       361 ~at~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~lV  440 (705)
                      ..++.|+..+.||+|++|.||+|.+..++..+++|++..... ..+.+.+|+++++.++|+|++++++.+.. ....++|
T Consensus        16 ~~~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~~lv   93 (286)
T cd06614          16 DPRELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQ-NKELIINEILIMKDCKHPNIVDYYDSYLV-GDELWVV   93 (286)
T ss_pred             CccccchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCch-hHHHHHHHHHHHHHCCCCCeeEEEEEEEE-CCEEEEE
Confidence            356678888999999999999999988889999999876544 56778999999999999999999998876 5789999


Q ss_pred             EeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecCC
Q 005257          441 YDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGH  520 (705)
Q Consensus       441 ~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~~  520 (705)
                      +||+++++|.+++....  ..+++.++..++.|++.||.|||+   .+++|+||+|+||+++.++.++|+|||++.....
T Consensus        94 ~e~~~~~~L~~~l~~~~--~~l~~~~~~~i~~~i~~~L~~lH~---~gi~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~  168 (286)
T cd06614          94 MEYMDGGSLTDIITQNF--VRMNEPQIAYVCREVLQGLEYLHS---QNVIHRDIKSDNILLSKDGSVKLADFGFAAQLTK  168 (286)
T ss_pred             EeccCCCcHHHHHHHhc--cCCCHHHHHHHHHHHHHHHHHHHh---CCeeeCCCChhhEEEcCCCCEEECccchhhhhcc
Confidence            99999999999997654  268999999999999999999998   9999999999999999999999999999865543


Q ss_pred             CCcceeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhHHHHHhhhcC
Q 005257          521 GQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRAK  600 (705)
Q Consensus       521 ~~~~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~l~~~  600 (705)
                      ... ......++..|+|||.+.+..++.++|||||||++|||++|+.||....+.  ...... .......         
T Consensus       169 ~~~-~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slGvil~~l~~g~~p~~~~~~~--~~~~~~-~~~~~~~---------  235 (286)
T cd06614         169 EKS-KRNSVVGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEGEPPYLREPPL--RALFLI-TTKGIPP---------  235 (286)
T ss_pred             chh-hhccccCCcccCCHhHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCHH--HHHHHH-HhcCCCC---------
Confidence            221 122345788999999998888999999999999999999999999764321  111111 1110000         


Q ss_pred             CCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 005257          601 GGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKV  635 (705)
Q Consensus       601 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  635 (705)
                      ..........+.+++.+||+.+|.+||++.++++.
T Consensus       236 ~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~  270 (286)
T cd06614         236 LKNPEKWSPEFKDFLNKCLVKDPEKRPSAEELLQH  270 (286)
T ss_pred             CcchhhCCHHHHHHHHHHhccChhhCcCHHHHhhC
Confidence            01111234678899999999999999999999863

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou

>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]

Probab=100.00  E-value=1.6e-34  Score=332.35  Aligned_cols=266  Identities=28%  Similarity=0.481  Sum_probs=216.0

Q ss_pred             HHHHhCCCCcceEEeecCceEEEEEEEcC-------CCeEEEEEEeccCC-chhHHHHHHHHHHhccC-CCCCcceeeee
Q 005257          359 IEAATKGFSEENVIGVGGNGKVYKGVLEG-------GGAEIAVKRISHEN-DGGTRAFLAEISSLGRL-KHKSLVGLRGW  429 (705)
Q Consensus       359 l~~at~~f~~~~~LG~G~fg~Vy~~~~~~-------~~~~vavK~i~~~~-~~~~~~~~~Ei~~l~~l-~Hpniv~l~g~  429 (705)
                      ++...++....+.||+|.||.|++|....       ....||||.++... ..+.+.+..|+++|+.+ +|+||+.++|+
T Consensus       291 ~e~~~~~l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~~~~~~~~~El~~m~~~g~H~niv~llG~  370 (609)
T KOG0200|consen  291 WEIPRENLKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASSSEKKDLMSELNVLKELGKHPNIVNLLGA  370 (609)
T ss_pred             eeechhhccccceeecccccceEeEEEeecccccccceEEEEEEecccccCcHHHHHHHHHHHHHHHhcCCcchhhheee
Confidence            34444555666799999999999998641       14679999987653 35677899999999999 69999999999


Q ss_pred             eeeccCceEEEEeeCCCCChhHHHHhcC------CC-------CcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 005257          430 CKREKGSLMLVYDYMENGSLDKWIFQCD------GS-------MMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKS  496 (705)
Q Consensus       430 ~~~~~~~~~lV~E~~~~gsL~~~L~~~~------~~-------~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp  496 (705)
                      |.. ++.+++|+||+..|+|.++|+.++      ..       ..++..+++.++.|||.|++||++   .++|||||.+
T Consensus       371 ~t~-~~~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~---~~~vHRDLAa  446 (609)
T KOG0200|consen  371 CTQ-DGPLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLAS---VPCVHRDLAA  446 (609)
T ss_pred             ecc-CCceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhh---CCccchhhhh
Confidence            987 788999999999999999998765      00       239999999999999999999998   9999999999


Q ss_pred             CCeEEccCCCeeeeeeccceecCCCCcceeeeeec--cccCCCccccccCCCCccccEEEEehhHHHHhh-CCCCCCCCC
Q 005257          497 SNVLLDKEMNGRLGDFGLARMHGHGQVASTTRVVG--TVGYLAPEVFSSGRASTQTDVFGFGILILEVLS-GRRPIEEGK  573 (705)
Q Consensus       497 ~NILld~~~~~kL~DFGla~~~~~~~~~~~~~~~g--t~~y~APE~~~~~~~s~ksDVwS~Gvvl~Ellt-G~~Pf~~~~  573 (705)
                      +|||+..+..+||+|||+|+...+........-.|  ...|||||.+....++.++|||||||+||||++ |..||.+-.
T Consensus       447 RNVLi~~~~~~kIaDFGlar~~~~~~~y~~~~~~~~LP~kWmApEsl~~~~ft~kSDVWSfGI~L~EifsLG~~PYp~~~  526 (609)
T KOG0200|consen  447 RNVLITKNKVIKIADFGLARDHYNKDYYRTKSSAGTLPVKWMAPESLFDRVFTSKSDVWSFGILLWEIFTLGGTPYPGIP  526 (609)
T ss_pred             hhEEecCCCEEEEccccceeccCCCCceEecCCCCccceeecCHHHhccCcccccchhhHHHHHHHHHhhCCCCCCCCCC
Confidence            99999999999999999999765544433222222  446999999999999999999999999999999 889997622


Q ss_pred             ccHHHHHHHHHHhCchhHHHHHhhhcCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHhccc
Q 005257          574 PNLVEMVWELMVQGKLLDALDARLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLEGKIE  641 (705)
Q Consensus       574 ~~~~~~v~~~~~~~~~~~~id~~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~  641 (705)
                        ....+++.+.+|..++           .+..+...+..+|+.||+.+|++||++.++++.|+..+.
T Consensus       527 --~~~~l~~~l~~G~r~~-----------~P~~c~~eiY~iM~~CW~~~p~~RP~F~~~~~~~~~~l~  581 (609)
T KOG0200|consen  527 --PTEELLEFLKEGNRME-----------QPEHCSDEIYDLMKSCWNADPEDRPTFSECVEFFEKHLQ  581 (609)
T ss_pred             --cHHHHHHHHhcCCCCC-----------CCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHHHHHHH
Confidence              1122344555554322           234456778899999999999999999999999987544

>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

Probab=100.00  E-value=4.3e-34  Score=299.47  Aligned_cols=261  Identities=26%  Similarity=0.366  Sum_probs=199.4

Q ss_pred             CCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCC--chhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEEEEee
Q 005257          366 FSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHEN--DGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDY  443 (705)
Q Consensus       366 f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~--~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~lV~E~  443 (705)
                      |+..+.||.|++|.||+|.+..++..||+|++....  ....+.+.+|++++++++|||++++++++.. ++..+++|||
T Consensus         1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~~-~~~~~iv~e~   79 (283)
T cd07835           1 YQKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELNHPNIVRLLDVVHS-ENKLYLVFEF   79 (283)
T ss_pred             CchheEecCCCCeEEEEEEEcCCCCEEEEEEeecccccccchhHHHHHHHHHHhcCCCCccCHhheecc-CCeEEEEEec
Confidence            567789999999999999998889999999987543  2334678899999999999999999999876 6789999999


Q ss_pred             CCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecCCCCc
Q 005257          444 MENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQV  523 (705)
Q Consensus       444 ~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~~~~~  523 (705)
                      ++ ++|.+++..... ..+++..+..++.|++.||.|||+   ++++|+||+|+||+++.++.++|+|||+++.......
T Consensus        80 ~~-~~l~~~~~~~~~-~~~~~~~~~~~~~~i~~~L~~lH~---~~~~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~  154 (283)
T cd07835          80 LD-LDLKKYMDSSPL-TGLDPPLIKSYLYQLLQGIAYCHS---HRVLHRDLKPQNLLIDREGALKLADFGLARAFGVPVR  154 (283)
T ss_pred             cC-cCHHHHHhhCCC-CCCCHHHHHHHHHHHHHHHHHHHH---CCeeCCCCCHHHEEEcCCCcEEEeecccccccCCCcc
Confidence            95 689998865442 368999999999999999999998   8999999999999999999999999999976543322


Q ss_pred             ceeeeeeccccCCCccccccC-CCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHh-CchhHHH--------
Q 005257          524 ASTTRVVGTVGYLAPEVFSSG-RASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQ-GKLLDAL--------  593 (705)
Q Consensus       524 ~~~~~~~gt~~y~APE~~~~~-~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~-~~~~~~i--------  593 (705)
                      . .....++..|+|||++.+. .++.++||||||+++|||++|+.||.....  .+........ +......        
T Consensus       155 ~-~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (283)
T cd07835         155 T-YTHEVVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSE--IDQLFRIFRTLGTPDEDVWPGVTSLP  231 (283)
T ss_pred             c-cCccccccCCCCCceeecCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCH--HHHHHHHHHHhCCCChHHhhhhhhch
Confidence            1 1223568899999988654 578899999999999999999999976432  1111111111 0000000        


Q ss_pred             --HHhhhcC-----CCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 005257          594 --DARLRAK-----GGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKV  635 (705)
Q Consensus       594 --d~~l~~~-----~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  635 (705)
                        .......     ..........+.+++.+|++++|++||++.|+++.
T Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~  280 (283)
T cd07835         232 DYKPTFPKWARQDLSKVVPNLDEDGLDLLSKMLVYDPAKRISAKAALQH  280 (283)
T ss_pred             hhhhhcccccccchhhhcCCCCHHHHHHHHHHhcCChhhCcCHHHHhcC
Confidence              0000000     00011123567899999999999999999998863

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc

>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

Probab=100.00  E-value=1.5e-34  Score=298.72  Aligned_cols=244  Identities=26%  Similarity=0.416  Sum_probs=198.8

Q ss_pred             EeecCceEEEEEEEcCCCeEEEEEEeccCCc---hhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEEEEeeCCCCC
Q 005257          372 IGVGGNGKVYKGVLEGGGAEIAVKRISHEND---GGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGS  448 (705)
Q Consensus       372 LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~---~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~lV~E~~~~gs  448 (705)
                      ||+|+||.||++.+..+++.+++|.+.....   ...+.+.+|++++++++||||+++++.+.. +...++++||+++++
T Consensus         1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-~~~~~lv~e~~~~~~   79 (265)
T cd05579           1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSFQG-KKNLYLVMEYLPGGD   79 (265)
T ss_pred             CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHHHheec-CcEEEEEEecCCCCc
Confidence            6899999999999998899999999865433   455678999999999999999999987765 678899999999999


Q ss_pred             hhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecCCCCc-----
Q 005257          449 LDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQV-----  523 (705)
Q Consensus       449 L~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~~~~~-----  523 (705)
                      |.+++.+..   .+++..+..++.|++.||+|||+   .+++|+||+|+||++++++.++|+|||++........     
T Consensus        80 L~~~l~~~~---~~~~~~~~~i~~qi~~~L~~lH~---~~i~H~di~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~  153 (265)
T cd05579          80 LASLLENVG---SLDEDVARIYIAEIVLALEYLHS---NGIIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVRRQINLND  153 (265)
T ss_pred             HHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHH---cCeecCCCCHHHeEEcCCCCEEEEecccchhcccCccccccc
Confidence            999997643   68999999999999999999998   9999999999999999999999999999876543321     


Q ss_pred             --ceeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhHHHHHhhhcCC
Q 005257          524 --ASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRAKG  601 (705)
Q Consensus       524 --~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~l~~~~  601 (705)
                        .......++..|+|||.......+.++||||||+++|||++|+.||......  +. ......+.            .
T Consensus       154 ~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~--~~-~~~~~~~~------------~  218 (265)
T cd05579         154 DEKEDKRIVGTPDYIAPEVILGQGHSKTVDWWSLGCILYEFLVGIPPFHGETPE--EI-FQNILNGK------------I  218 (265)
T ss_pred             ccccccCcccCccccCHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHH--HH-HHHHhcCC------------c
Confidence              1223356788999999998888999999999999999999999999765421  11 11111111            1


Q ss_pred             CCCHHH--HHHHHHHHHHcCCCCCCCCCCHHHHHHHHH
Q 005257          602 GFDEDE--VERVLHLGLLCAYPDPRARPTMRQVVKVLE  637 (705)
Q Consensus       602 ~~~~~~--~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  637 (705)
                      ..+...  ...+..++..||+.+|.+||++.++.+.|+
T Consensus       219 ~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~~~~~l~  256 (265)
T cd05579         219 EWPEDVEVSDEAIDLISKLLVPDPEKRLGAKSIEEIKN  256 (265)
T ss_pred             CCCccccCCHHHHHHHHHHhcCCHhhcCCCccHHHHhc
Confidence            111222  567889999999999999999977776665

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re

>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

Probab=100.00  E-value=2.1e-34  Score=303.62  Aligned_cols=263  Identities=25%  Similarity=0.325  Sum_probs=199.8

Q ss_pred             CCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCCc--hhHHHHHHHHHHhccCCCCCcceeeeeeeecc-CceEEE
Q 005257          364 KGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHEND--GGTRAFLAEISSLGRLKHKSLVGLRGWCKREK-GSLMLV  440 (705)
Q Consensus       364 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~--~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~-~~~~lV  440 (705)
                      ++|+..+.||+|+||.||+|..+.+++.+|+|.++....  .....+.+|+.++.+++||||+++++++.... ...++|
T Consensus         5 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~lv   84 (293)
T cd07843           5 DEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKLQHPNIVTVKEVVVGSNLDKIYMV   84 (293)
T ss_pred             hhhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeeccccccchhhHHHHHHHHHhcCCCCEEEEEEEEEecCCCcEEEE
Confidence            467788899999999999999998899999999975432  23345778999999999999999999887532 789999


Q ss_pred             EeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecCC
Q 005257          441 YDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGH  520 (705)
Q Consensus       441 ~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~~  520 (705)
                      |||++ ++|.+++.....  .+++.++..++.|++.||.|||+   .+++|+||||+||+++.++.+||+|||+++....
T Consensus        85 ~e~~~-~~L~~~~~~~~~--~l~~~~~~~i~~qi~~aL~~LH~---~~i~H~dl~p~nili~~~~~~~l~d~g~~~~~~~  158 (293)
T cd07843          85 MEYVE-HDLKSLMETMKQ--PFLQSEVKCLMLQLLSGVAHLHD---NWILHRDLKTSNLLLNNRGILKICDFGLAREYGS  158 (293)
T ss_pred             ehhcC-cCHHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHH---CCeeeccCCHHHEEECCCCcEEEeecCceeeccC
Confidence            99997 499998865432  58999999999999999999998   8999999999999999999999999999987654


Q ss_pred             CCcceeeeeeccccCCCccccccC-CCCccccEEEEehhHHHHhhCCCCCCCCCcc-HHHHHHHHH-----------Hh-
Q 005257          521 GQVASTTRVVGTVGYLAPEVFSSG-RASTQTDVFGFGILILEVLSGRRPIEEGKPN-LVEMVWELM-----------VQ-  586 (705)
Q Consensus       521 ~~~~~~~~~~gt~~y~APE~~~~~-~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~-~~~~v~~~~-----------~~-  586 (705)
                      ... ......+++.|+|||.+.+. .++.++||||||+++|||++|+.||...... ....+....           .. 
T Consensus       159 ~~~-~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (293)
T cd07843         159 PLK-PYTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGKSEIDQLNKIFKLLGTPTEKIWPGFSEL  237 (293)
T ss_pred             Ccc-ccccccccccccCchhhcCCccccchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhcc
Confidence            322 12234578899999998764 4689999999999999999999999754321 001000000           00 


Q ss_pred             -----CchhHHHHHhhhcCCCCCHH-HHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 005257          587 -----GKLLDALDARLRAKGGFDED-EVERVLHLGLLCAYPDPRARPTMRQVVKV  635 (705)
Q Consensus       587 -----~~~~~~id~~l~~~~~~~~~-~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  635 (705)
                           ..........+.  ..++.. ..+.+.+++..||+.+|++|||+.|+++.
T Consensus       238 ~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~li~~~l~~~p~~R~t~~ell~~  290 (293)
T cd07843         238 PGAKKKTFTKYPYNQLR--KKFPALSLSDNGFDLLNRLLTYDPAKRISAEDALKH  290 (293)
T ss_pred             chhcccccccccchhhh--ccccccCCChHHHHHHHHHhccCccccCCHHHHhcC
Confidence                 000000000000  111111 24567899999999999999999999863

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the

>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

Probab=100.00  E-value=1.1e-34  Score=305.02  Aligned_cols=256  Identities=25%  Similarity=0.374  Sum_probs=196.0

Q ss_pred             CCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCC-chhHHHHHHHHHHhccCC-CCCcceeeeeeeeccCceEEEEe
Q 005257          365 GFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHEN-DGGTRAFLAEISSLGRLK-HKSLVGLRGWCKREKGSLMLVYD  442 (705)
Q Consensus       365 ~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~-~~~~~~~~~Ei~~l~~l~-Hpniv~l~g~~~~~~~~~~lV~E  442 (705)
                      +|...+.||+|+||.||++.+..+++.+|+|++.... ......+.+|+.++.++. ||||+++++++.. ++..+++||
T Consensus         5 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~-~~~~~~~~e   83 (288)
T cd06616           5 DLKDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDEKEQKRLLMDLDVVMRSSDCPYIVKFYGALFR-EGDCWICME   83 (288)
T ss_pred             HhHHHHHhCCCCceEEEEEEECCCCCEEEEEEehhccChHHHHHHHHHHHHHHHhcCCCCEeeeeeEEec-CCcEEEEEe
Confidence            3445678999999999999999999999999987543 234567899999999996 9999999998876 667899999


Q ss_pred             eCCCCChhHHHHh--cCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecCC
Q 005257          443 YMENGSLDKWIFQ--CDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGH  520 (705)
Q Consensus       443 ~~~~gsL~~~L~~--~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~~  520 (705)
                      |+.. +|.++...  ......+++..+..++.|++.||+|||+  ..+++||||||+||+++.++.+||+|||+++....
T Consensus        84 ~~~~-~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~--~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~  160 (288)
T cd06616          84 LMDI-SLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKE--ELKIIHRDVKPSNILLDRNGNIKLCDFGISGQLVD  160 (288)
T ss_pred             cccC-CHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhh--cCCeeccCCCHHHEEEccCCcEEEeecchhHHhcc
Confidence            9864 66554321  1122368999999999999999999997  35899999999999999999999999999976543


Q ss_pred             CCcceeeeeeccccCCCccccccC---CCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhHHHHHhh
Q 005257          521 GQVASTTRVVGTVGYLAPEVFSSG---RASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDARL  597 (705)
Q Consensus       521 ~~~~~~~~~~gt~~y~APE~~~~~---~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~l  597 (705)
                      ...  .....|++.|+|||.+.+.   .++.++|||||||++|||++|+.||..... ..+.+.+.. .+..     +.+
T Consensus       161 ~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~-~~~~~~~~~-~~~~-----~~~  231 (288)
T cd06616         161 SIA--KTRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKWNS-VFDQLTQVV-KGDP-----PIL  231 (288)
T ss_pred             CCc--cccccCccCccCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCchhcch-HHHHHhhhc-CCCC-----CcC
Confidence            221  1223678999999998765   689999999999999999999999975431 111111111 1110     011


Q ss_pred             hcCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 005257          598 RAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKV  635 (705)
Q Consensus       598 ~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  635 (705)
                      .  ..........+.+++.+||+.+|++||++.++++.
T Consensus       232 ~--~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~i~~~  267 (288)
T cd06616         232 S--NSEEREFSPSFVNFINLCLIKDESKRPKYKELLEH  267 (288)
T ss_pred             C--CcCCCccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence            1  11112345678899999999999999999999885

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates

>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

Probab=100.00  E-value=3.7e-34  Score=299.91  Aligned_cols=264  Identities=25%  Similarity=0.370  Sum_probs=200.7

Q ss_pred             CCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCCc-hhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEEEEee
Q 005257          365 GFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHEND-GGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDY  443 (705)
Q Consensus       365 ~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~-~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~lV~E~  443 (705)
                      +|+..+.||+|++|.||+|++..+++.||||+++.... ...+.+.+|+.++++++||||+++++++.. .+..++||||
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~lv~e~   79 (284)
T cd07836           1 NFKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEEGTPSTAIREISLMKELKHENIVRLHDVIHT-ENKLMLVFEY   79 (284)
T ss_pred             CceEeeeeccCCceEEEEEEECCCCeEEEEEEecccccccchHHHHHHHHHHHhhcCCCEeeeeeeEee-CCcEEEEEec
Confidence            47888999999999999999998999999999876533 234667889999999999999999999876 6788999999


Q ss_pred             CCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecCCCCc
Q 005257          444 MENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQV  523 (705)
Q Consensus       444 ~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~~~~~  523 (705)
                      +++ +|.+++........+++.++..++.|++.||.|||+   .+++||||||+||++++++.+||+|||+++.......
T Consensus        80 ~~~-~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~h~dl~p~ni~~~~~~~~~l~d~g~~~~~~~~~~  155 (284)
T cd07836          80 MDK-DLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHE---NRVLHRDLKPQNLLINKRGELKLADFGLARAFGIPVN  155 (284)
T ss_pred             CCc-cHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHHH---CCeeeCCCCHHHEEECCCCcEEEeecchhhhhcCCcc
Confidence            985 898888765444468999999999999999999998   8999999999999999999999999999976543221


Q ss_pred             ceeeeeeccccCCCcccccc-CCCCccccEEEEehhHHHHhhCCCCCCCCCcc-HHHHHHHHHHhCc--------hhHHH
Q 005257          524 ASTTRVVGTVGYLAPEVFSS-GRASTQTDVFGFGILILEVLSGRRPIEEGKPN-LVEMVWELMVQGK--------LLDAL  593 (705)
Q Consensus       524 ~~~~~~~gt~~y~APE~~~~-~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~-~~~~v~~~~~~~~--------~~~~i  593 (705)
                       ......++..|++||++.+ ..++.++|||||||++|||++|+.||...... ......+......        .....
T Consensus       156 -~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (284)
T cd07836         156 -TFSNEVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNNEDQLLKIFRIMGTPTESTWPGISQLPEY  234 (284)
T ss_pred             -ccccccccccccChHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhHHHHhcCchh
Confidence             1122457889999999865 35788999999999999999999999764321 1111111100000        00000


Q ss_pred             HHhhhc-----CCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHH
Q 005257          594 DARLRA-----KGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVK  634 (705)
Q Consensus       594 d~~l~~-----~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~  634 (705)
                      ......     .....+.....+.+++..|++.||.+||++.++++
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~  280 (284)
T cd07836         235 KPTFPRYPPQDLQQLFPHADPLGIDLLHRLLQLNPELRISAHDALQ  280 (284)
T ss_pred             cccccCCChHHHHHHhhhcCcHHHHHHHHHhcCCcccCCCHHHHhc
Confidence            000000     00011123456789999999999999999999875

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.

>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

Probab=100.00  E-value=2e-34  Score=306.80  Aligned_cols=290  Identities=23%  Similarity=0.315  Sum_probs=211.1

Q ss_pred             CCCcceEEeecCceEEEEEEEcC--CCeEEEEEEeccCC---chhHHHHHHHHHHhccCCCCCcceeeeeeeec-cCceE
Q 005257          365 GFSEENVIGVGGNGKVYKGVLEG--GGAEIAVKRISHEN---DGGTRAFLAEISSLGRLKHKSLVGLRGWCKRE-KGSLM  438 (705)
Q Consensus       365 ~f~~~~~LG~G~fg~Vy~~~~~~--~~~~vavK~i~~~~---~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~-~~~~~  438 (705)
                      +|+..+.||+|+||.||+|....  ++..||+|.+....   ....+.+.+|+.++.+++||||+++++++... ...++
T Consensus         1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~   80 (316)
T cd07842           1 KYEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVFLEHADKSVY   80 (316)
T ss_pred             CceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEEeCCCCceEE
Confidence            47788999999999999999987  78999999997643   34456788999999999999999999998763 16789


Q ss_pred             EEEeeCCCCChhHHHHhcC--CCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEcc----CCCeeeeee
Q 005257          439 LVYDYMENGSLDKWIFQCD--GSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDK----EMNGRLGDF  512 (705)
Q Consensus       439 lV~E~~~~gsL~~~L~~~~--~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~----~~~~kL~DF  512 (705)
                      +||||+++ +|.+++....  ....+++..++.++.|++.||.|||+   .+++||||||+||+++.    ++.+||+||
T Consensus        81 lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~---~~i~h~dlkp~Nil~~~~~~~~~~~kl~Df  156 (316)
T cd07842          81 LLFDYAEH-DLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHS---NWVLHRDLKPANILVMGEGPERGVVKIGDL  156 (316)
T ss_pred             EEEeCCCc-CHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHh---CCEeeCCCCHHHEEEcCCCCccceEEECCC
Confidence            99999975 6776664322  12268999999999999999999998   99999999999999999    899999999


Q ss_pred             ccceecCCCCc--ceeeeeeccccCCCccccccC-CCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCch
Q 005257          513 GLARMHGHGQV--ASTTRVVGTVGYLAPEVFSSG-RASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKL  589 (705)
Q Consensus       513 Gla~~~~~~~~--~~~~~~~gt~~y~APE~~~~~-~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~  589 (705)
                      |+++.......  .......++..|+|||++.+. .++.++|||||||+++||++|+.||........            
T Consensus       157 g~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~------------  224 (316)
T cd07842         157 GLARLFNAPLKPLADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTLEPIFKGREAKIK------------  224 (316)
T ss_pred             ccccccCCCcccccccCCccccccccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhcCCCCcCCccccc------------
Confidence            99986543322  122335678999999988664 578999999999999999999999976433210            


Q ss_pred             hHHHHHhhhcCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHh--ccc-c-CCCCCc-------chhhHHHHHH
Q 005257          590 LDALDARLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLEG--KIE-A-GIENET-------EDMDAYLLQQ  658 (705)
Q Consensus       590 ~~~id~~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~--~~~-~-~~~~~~-------~~~~~~~~~~  658 (705)
                                 . ..+.....+..+...+..+++..|+.+.+..+....  ... . ......       ......+.+.
T Consensus       225 -----------~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  292 (316)
T cd07842         225 -----------K-SNPFQRDQLERIFEVLGTPTEKDWPDIKKMPEYDTLMKDFKTKTYPSNSLAKWMEKHKKPDSQGFDL  292 (316)
T ss_pred             -----------c-cchhHHHHHHHHHHHhCCCchhHHHHHhhcccchhhhhhccCCCCCCccHHHHHHhccCCCHHHHHH
Confidence                       0 000111223333333444444444433333222210  000 0 000000       0223346677


Q ss_pred             hhccccccccccccccCCCCCCCc
Q 005257          659 VKSKDMWANYSRSFGYGYATHPTF  682 (705)
Q Consensus       659 ~~~~~~~~~~~r~~~~~~~~hp~f  682 (705)
                      +..+..++|..|.++.+++.||||
T Consensus       293 i~~~l~~~P~~Rps~~eil~~~~f  316 (316)
T cd07842         293 LRKLLEYDPTKRITAEEALEHPYF  316 (316)
T ss_pred             HHHHhcCCcccCcCHHHHhcCCCC
Confidence            888888999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the

>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

Probab=100.00  E-value=2.5e-34  Score=304.22  Aligned_cols=265  Identities=27%  Similarity=0.373  Sum_probs=201.1

Q ss_pred             HHhCCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCC--chhHHHHHHHHHHhccCCCCCcceeeeeeeecc----
Q 005257          361 AATKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHEN--DGGTRAFLAEISSLGRLKHKSLVGLRGWCKREK----  434 (705)
Q Consensus       361 ~at~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~--~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~----  434 (705)
                      .+.++|+..+.||+|+||.||+|.++.+++.||+|+++...  ......+.+|++++++++|||++++++++....    
T Consensus         4 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~~~   83 (302)
T cd07864           4 RCVDKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLNHRNIVNLKEIVTDKQDALD   83 (302)
T ss_pred             hhhhhhheeeeecccCCEEEEEEEECCCCcEEEEEEEeecccccCchHHHHHHHHHHHhCCCCCeeeeeheecCcchhhh
Confidence            45677899999999999999999999889999999987543  233456788999999999999999999886532    


Q ss_pred             -----CceEEEEeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeee
Q 005257          435 -----GSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRL  509 (705)
Q Consensus       435 -----~~~~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL  509 (705)
                           +.+++|+||+++ +|...+....  ..+++.++..++.|++.||+|||+   .+|+|+||||+||++++++.+||
T Consensus        84 ~~~~~~~~~lv~e~~~~-~l~~~l~~~~--~~~~~~~~~~i~~qi~~aL~~LH~---~~i~H~dl~p~nili~~~~~~kl  157 (302)
T cd07864          84 FKKDKGAFYLVFEYMDH-DLMGLLESGL--VHFSEDHIKSFMKQLLEGLNYCHK---KNFLHRDIKCSNILLNNKGQIKL  157 (302)
T ss_pred             ccccCCcEEEEEcccCc-cHHHHHhcCC--CCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEECCCCcEEe
Confidence                 378999999976 7777775432  268999999999999999999998   99999999999999999999999


Q ss_pred             eeeccceecCCCCcceeeeeeccccCCCcccccc-CCCCccccEEEEehhHHHHhhCCCCCCCCCcc-HHHHHHHHHHhC
Q 005257          510 GDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSS-GRASTQTDVFGFGILILEVLSGRRPIEEGKPN-LVEMVWELMVQG  587 (705)
Q Consensus       510 ~DFGla~~~~~~~~~~~~~~~gt~~y~APE~~~~-~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~-~~~~v~~~~~~~  587 (705)
                      +|||++...............++..|+|||.+.+ ..++.++|||||||++|||++|+.||...... ....+.+. ..+
T Consensus       158 ~dfg~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~~~el~~g~~~~~~~~~~~~~~~~~~~-~~~  236 (302)
T cd07864         158 ADFGLARLYNSEESRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFTKKPIFQANQELAQLELISRL-CGS  236 (302)
T ss_pred             CcccccccccCCcccccccceeccCccChHHhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHH-hCC
Confidence            9999998765433222222356788999998865 35789999999999999999999999754321 11111111 111


Q ss_pred             chhHHH------------H------HhhhcCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 005257          588 KLLDAL------------D------ARLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKV  635 (705)
Q Consensus       588 ~~~~~i------------d------~~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  635 (705)
                      ......            +      .+...  . .......+.+++..||+.+|++||++.+++.+
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~  299 (302)
T cd07864         237 PCPAVWPDVIKLPYFNTMKPKKQYRRRLRE--E-FSFIPTPALDLLDHMLTLDPSKRCTAEEALNS  299 (302)
T ss_pred             CChhhcccccccccccccccccccccchhh--h-cCCCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence            110000            0      00000  0 00124568899999999999999999998763

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely

>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

Probab=100.00  E-value=7.6e-34  Score=303.37  Aligned_cols=249  Identities=25%  Similarity=0.362  Sum_probs=198.9

Q ss_pred             CCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCC---chhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEEEEe
Q 005257          366 FSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHEN---DGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYD  442 (705)
Q Consensus       366 f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~---~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~lV~E  442 (705)
                      |...+.||+|+||.||+++...++..+|+|++....   ....+.+.+|++++++++|||+++++++|.. +...++|||
T Consensus        27 f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~lv~e  105 (317)
T cd06635          27 FTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLR-EHTAWLVME  105 (317)
T ss_pred             hhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEEEEEee-CCeEEEEEe
Confidence            566788999999999999998889999999986442   2334578899999999999999999998876 667899999


Q ss_pred             eCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecCCCC
Q 005257          443 YMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQ  522 (705)
Q Consensus       443 ~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~~~~  522 (705)
                      |++ |+|.+++....  ..+++.++..++.|++.||.|||+   .+++||||+|+||+++.++.+||+|||++...... 
T Consensus       106 ~~~-g~l~~~~~~~~--~~l~~~~~~~i~~~i~~~l~~lH~---~~i~H~dL~p~Nil~~~~~~~kl~dfg~~~~~~~~-  178 (317)
T cd06635         106 YCL-GSASDLLEVHK--KPLQEVEIAAITHGALQGLAYLHS---HNMIHRDIKAGNILLTEPGQVKLADFGSASIASPA-  178 (317)
T ss_pred             CCC-CCHHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCcccEEECCCCCEEEecCCCccccCCc-
Confidence            997 58877775433  258999999999999999999998   99999999999999999999999999998754332 


Q ss_pred             cceeeeeeccccCCCccccc---cCCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhHHHHHhhhc
Q 005257          523 VASTTRVVGTVGYLAPEVFS---SGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRA  599 (705)
Q Consensus       523 ~~~~~~~~gt~~y~APE~~~---~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~l~~  599 (705)
                          ....|++.|+|||++.   .+.++.++|||||||++|||++|+.||......  .... .+..+.        .. 
T Consensus       179 ----~~~~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~--~~~~-~~~~~~--------~~-  242 (317)
T cd06635         179 ----NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAM--SALY-HIAQNE--------SP-  242 (317)
T ss_pred             ----ccccCCccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCccHH--HHHH-HHHhcc--------CC-
Confidence                2246788999999974   456899999999999999999999998754321  1111 111110        00 


Q ss_pred             CCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHhc
Q 005257          600 KGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLEGK  639 (705)
Q Consensus       600 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~  639 (705)
                       ..........+.+++.+||+.+|.+||++.++++.+...
T Consensus       243 -~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~~  281 (317)
T cd06635         243 -TLQSNEWSDYFRNFVDSCLQKIPQDRPTSEELLKHMFVL  281 (317)
T ss_pred             -CCCCccccHHHHHHHHHHccCCcccCcCHHHHHhChhhh
Confidence             111223445688999999999999999999999876543

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron

>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

Probab=100.00  E-value=7.3e-34  Score=292.10  Aligned_cols=252  Identities=25%  Similarity=0.393  Sum_probs=207.6

Q ss_pred             CCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCCc--hhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEEEEe
Q 005257          365 GFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHEND--GGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYD  442 (705)
Q Consensus       365 ~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~--~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~lV~E  442 (705)
                      +|+..+.||+|+||.||++.+..++..+|+|++.....  ...+.+.+|+++++.++|||++++.+.+.. +...++|+|
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~-~~~~~lv~e   79 (258)
T cd08215           1 KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKYYESFEE-KGKLCIVME   79 (258)
T ss_pred             CceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccCChHHHHHHHHHHHHHHhcCCCChhheEEEEec-CCEEEEEEE
Confidence            47788999999999999999998899999999876533  556778999999999999999999998776 578999999


Q ss_pred             eCCCCChhHHHHhcC-CCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecCCC
Q 005257          443 YMENGSLDKWIFQCD-GSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHG  521 (705)
Q Consensus       443 ~~~~gsL~~~L~~~~-~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~~~  521 (705)
                      |+++++|.+++.... ....+++.++..++.+++.||.|||+   .+++|+||+|+||+++.++.++|+|||++......
T Consensus        80 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~---~~~~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~  156 (258)
T cd08215          80 YADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHS---RKILHRDIKPQNIFLTSNGLVKLGDFGISKVLSST  156 (258)
T ss_pred             ecCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHh---CCEecccCChHHeEEcCCCcEEECCccceeecccC
Confidence            999999999997642 12479999999999999999999998   89999999999999999999999999999876554


Q ss_pred             CcceeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhHHHHHhhhcCC
Q 005257          522 QVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRAKG  601 (705)
Q Consensus       522 ~~~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~l~~~~  601 (705)
                      .. ......|++.|+|||.+....++.++||||+|+++++|++|+.||......  +.. ........           .
T Consensus       157 ~~-~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~--~~~-~~~~~~~~-----------~  221 (258)
T cd08215         157 VD-LAKTVVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKHPFEGENLL--ELA-LKILKGQY-----------P  221 (258)
T ss_pred             cc-eecceeeeecccChhHhccCCCCccccHHHHHHHHHHHHcCCCCCCCCcHH--HHH-HHHhcCCC-----------C
Confidence            31 223357889999999998888999999999999999999999999765421  111 11111111           1


Q ss_pred             CCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 005257          602 GFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKV  635 (705)
Q Consensus       602 ~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  635 (705)
                      ..+......+.+++.+||..+|++||++.++++.
T Consensus       222 ~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~  255 (258)
T cd08215         222 PIPSQYSSELRNLVSSLLQKDPEERPSIAQILQS  255 (258)
T ss_pred             CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence            1222344678899999999999999999998863

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They

>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase

Probab=100.00  E-value=4.7e-34  Score=309.73  Aligned_cols=261  Identities=23%  Similarity=0.311  Sum_probs=200.6

Q ss_pred             HhCCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccC--CchhHHHHHHHHHHhccCCCCCcceeeeeeeecc-----
Q 005257          362 ATKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHE--NDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREK-----  434 (705)
Q Consensus       362 at~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~--~~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~-----  434 (705)
                      ..++|+..+.||+|+||.||+|....+++.||||++...  .......+.+|+.++++++||||+++++++....     
T Consensus        14 ~~~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~   93 (353)
T cd07850          14 VLKRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSLEEF   93 (353)
T ss_pred             hhcceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCccccChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCCcccc
Confidence            457899999999999999999999989999999998653  2334567788999999999999999999875322     


Q ss_pred             CceEEEEeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeecc
Q 005257          435 GSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGL  514 (705)
Q Consensus       435 ~~~~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGl  514 (705)
                      ...++||||+. ++|.+.+..     .++..++..++.|++.||.|||+   .+++||||||+||+++.++.+||+|||+
T Consensus        94 ~~~~lv~e~~~-~~l~~~~~~-----~l~~~~~~~~~~ql~~aL~~LH~---~gi~H~dlkp~Nil~~~~~~~kL~Dfg~  164 (353)
T cd07850          94 QDVYLVMELMD-ANLCQVIQM-----DLDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGL  164 (353)
T ss_pred             CcEEEEEeccC-CCHHHHHhh-----cCCHHHHHHHHHHHHHHHHHHHh---CCeeeCCCCHHHEEECCCCCEEEccCcc
Confidence            35799999996 488887743     38889999999999999999998   9999999999999999999999999999


Q ss_pred             ceecCCCCcceeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHH-hCch----
Q 005257          515 ARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMV-QGKL----  589 (705)
Q Consensus       515 a~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~-~~~~----  589 (705)
                      ++.......  .....++..|+|||.+.+..++.++|||||||++|||++|+.||...+.. ..+ ..... .+..    
T Consensus       165 ~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~-~~~-~~~~~~~~~~~~~~  240 (353)
T cd07850         165 ARTAGTSFM--MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGTVLFPGTDHI-DQW-NKIIEQLGTPSDEF  240 (353)
T ss_pred             ceeCCCCCC--CCCCcccccccCHHHHhCCCCCCchhhHhHHHHHHHHHHCCCCCCCCCHH-HHH-HHHHHhcCCCCHHH
Confidence            987644322  22346789999999999989999999999999999999999999754321 111 01000 0000    


Q ss_pred             hHH--------HHHhhhcC-----------------CCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 005257          590 LDA--------LDARLRAK-----------------GGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKV  635 (705)
Q Consensus       590 ~~~--------id~~l~~~-----------------~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  635 (705)
                      .+.        .+.+....                 ..........+.+++.+|++.||++|||+.|++++
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eiL~~  311 (353)
T cd07850         241 MSRLQPTVRNYVENRPKYAGYSFEELFPDVLFPPDSESHNKLKASQARDLLSKMLVIDPEKRISVDDALQH  311 (353)
T ss_pred             HHHhhhhhhHHhhcCCCCCCcchhhhCcccccCcccccccccchhHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence            000        00000000                 00011234567899999999999999999999874

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK

>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=6.7e-34  Score=292.17  Aligned_cols=248  Identities=31%  Similarity=0.478  Sum_probs=205.8

Q ss_pred             CCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCCc--hhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEEEEe
Q 005257          365 GFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHEND--GGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYD  442 (705)
Q Consensus       365 ~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~--~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~lV~E  442 (705)
                      +|+..+.||+|++|.||++....+++.+++|.+.....  ...+.+.+|++++.+++|||++++++++.. ++..+++||
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~~~v~e   79 (254)
T cd06627           1 NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYIGSIET-SDSLYIILE   79 (254)
T ss_pred             CceeeeEEcccCCeEEEEEEEcCCCcEEEEEEecccccCHHHHHHHHHHHHHHHhCCCCCccEEEEEEEe-CCEEEEEEe
Confidence            46778999999999999999998899999999976643  456789999999999999999999998876 678899999


Q ss_pred             eCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecCCCC
Q 005257          443 YMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQ  522 (705)
Q Consensus       443 ~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~~~~  522 (705)
                      |+++++|.+++...   ..+++..+..++.|++.||.|||+   .+++||||||+||+++.++.++|+|||++.......
T Consensus        80 ~~~~~~L~~~~~~~---~~l~~~~~~~~~~~i~~~l~~lH~---~~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~  153 (254)
T cd06627          80 YAENGSLRQIIKKF---GPFPESLVAVYVYQVLQGLAYLHE---QGVIHRDIKAANILTTKDGVVKLADFGVATKLNDVS  153 (254)
T ss_pred             cCCCCcHHHHHHhc---cCCCHHHHHHHHHHHHHHHHHHhh---CCcccCCCCHHHEEECCCCCEEEeccccceecCCCc
Confidence            99999999998654   268999999999999999999998   999999999999999999999999999998765443


Q ss_pred             cceeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhHHHHHhhhcCCC
Q 005257          523 VASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRAKGG  602 (705)
Q Consensus       523 ~~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~l~~~~~  602 (705)
                      .. .....++..|+|||...+..++.++||||+|+++|||++|+.||......  ...+.... ..           ...
T Consensus       154 ~~-~~~~~~~~~y~~pe~~~~~~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~~~--~~~~~~~~-~~-----------~~~  218 (254)
T cd06627         154 KD-DASVVGTPYWMAPEVIEMSGASTASDIWSLGCTVIELLTGNPPYYDLNPM--AALFRIVQ-DD-----------HPP  218 (254)
T ss_pred             cc-ccccccchhhcCHhhhcCCCCCcchhHHHHHHHHHHHHhCCCCCCCccHH--HHHHHHhc-cC-----------CCC
Confidence            32 22346789999999998877899999999999999999999999754321  11111110 00           012


Q ss_pred             CCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHH
Q 005257          603 FDEDEVERVLHLGLLCAYPDPRARPTMRQVVK  634 (705)
Q Consensus       603 ~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~  634 (705)
                      .+......+..++.+||+.+|++||++.+++.
T Consensus       219 ~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~  250 (254)
T cd06627         219 LPEGISPELKDFLMQCFQKDPNLRPTAKQLLK  250 (254)
T ss_pred             CCCCCCHHHHHHHHHHHhCChhhCcCHHHHhc
Confidence            22334567889999999999999999999875

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast

>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

Probab=100.00  E-value=6.3e-34  Score=297.70  Aligned_cols=259  Identities=23%  Similarity=0.249  Sum_probs=196.1

Q ss_pred             CCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCC-chhHHHHHHHHHHhccCC-CCCcceeeeeeeec-cCceEEEEe
Q 005257          366 FSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHEN-DGGTRAFLAEISSLGRLK-HKSLVGLRGWCKRE-KGSLMLVYD  442 (705)
Q Consensus       366 f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~-~~~~~~~~~Ei~~l~~l~-Hpniv~l~g~~~~~-~~~~~lV~E  442 (705)
                      |...+.||+|+||.||+|....++..+|+|+++... ........+|+.++.++. |||++++++++... .+.+++|+|
T Consensus         1 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~lv~e   80 (282)
T cd07831           1 YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLEQVNNLREIQALRRLSPHPNILRLIEVLFDRKTGRLALVFE   80 (282)
T ss_pred             CceEeeccccccceEEEEEEcCCCcEEEEEEehhccCCchhhhHHHHHHHHhhcCCCCCccceEEEEecCCCCcEEEEEe
Confidence            556788999999999999999889999999987542 222334567999999985 99999999988763 167899999


Q ss_pred             eCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecCCCC
Q 005257          443 YMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQ  522 (705)
Q Consensus       443 ~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~~~~  522 (705)
                      |++ |+|.+.+....  ..+++.++..++.|++.||.|||+   .+++||||||+||+++. +.+||+|||+++......
T Consensus        81 ~~~-~~l~~~l~~~~--~~~~~~~~~~~~~qi~~~L~~LH~---~~i~H~dl~p~ni~l~~-~~~kl~dfg~~~~~~~~~  153 (282)
T cd07831          81 LMD-MNLYELIKGRK--RPLPEKRVKSYMYQLLKSLDHMHR---NGIFHRDIKPENILIKD-DILKLADFGSCRGIYSKP  153 (282)
T ss_pred             cCC-ccHHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHH---CCceecccCHHHEEEcC-CCeEEEecccccccccCC
Confidence            997 58888876533  268999999999999999999998   99999999999999999 999999999998664332


Q ss_pred             cceeeeeeccccCCCcccccc-CCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHH-HhCchhHHHHHhhhcC
Q 005257          523 VASTTRVVGTVGYLAPEVFSS-GRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELM-VQGKLLDALDARLRAK  600 (705)
Q Consensus       523 ~~~~~~~~gt~~y~APE~~~~-~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~-~~~~~~~~id~~l~~~  600 (705)
                      ..  ....++..|+|||++.. ..++.++|||||||++|||++|+.||.....  .+.+.... ..+...+.+.......
T Consensus       154 ~~--~~~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~  229 (282)
T cd07831         154 PY--TEYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTNE--LDQIAKIHDVLGTPDAEVLKKFRKS  229 (282)
T ss_pred             Cc--CCCCCCcccCChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCCCCCH--HHHHHHHHHHcCCCCHHHHHhhccc
Confidence            21  22457899999998654 5578899999999999999999999976442  11111111 1111111111111100


Q ss_pred             ----CCC-----------CHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 005257          601 ----GGF-----------DEDEVERVLHLGLLCAYPDPRARPTMRQVVKV  635 (705)
Q Consensus       601 ----~~~-----------~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  635 (705)
                          ..+           .......+.+++..||+++|++||++.++++.
T Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~~  279 (282)
T cd07831         230 RHMNYNFPSKKGTGLRKLLPNASAEGLDLLKKLLAYDPDERITAKQALRH  279 (282)
T ss_pred             ccccccCcccccccHHHHcccccHHHHHHHHHHhccCcccccCHHHHhhC
Confidence                000           11235788999999999999999999999863

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.

>PHA02882 putative serine/threonine kinase; Provisional

Probab=100.00  E-value=3.5e-34  Score=302.74  Aligned_cols=261  Identities=15%  Similarity=0.193  Sum_probs=188.6

Q ss_pred             hCCCCcceEEeecCceEEEEEEEcCC---CeEEEEEEeccCCchhH-----------HHHHHHHHHhccCCCCCcceeee
Q 005257          363 TKGFSEENVIGVGGNGKVYKGVLEGG---GAEIAVKRISHENDGGT-----------RAFLAEISSLGRLKHKSLVGLRG  428 (705)
Q Consensus       363 t~~f~~~~~LG~G~fg~Vy~~~~~~~---~~~vavK~i~~~~~~~~-----------~~~~~Ei~~l~~l~Hpniv~l~g  428 (705)
                      .++|...++||+|+||.||+|....+   +..+|+|..........           .....+...+..++|+|++++++
T Consensus        11 ~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~   90 (294)
T PHA02882         11 GKEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIPKYYG   90 (294)
T ss_pred             CCceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCCcEEE
Confidence            46789999999999999999998876   56777776443322111           12234455667789999999999


Q ss_pred             eeeeccC---ceEEEEeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCC
Q 005257          429 WCKREKG---SLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEM  505 (705)
Q Consensus       429 ~~~~~~~---~~~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~  505 (705)
                      .+.....   ..++++|++.. ++.+.+....   ..++..+..++.|++.||.|||+   .+|+||||||+|||++.++
T Consensus        91 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~---~~~~~~~~~i~~qi~~~l~~lH~---~~iiHrDiKp~Nill~~~~  163 (294)
T PHA02882         91 CGSFKRCRMYYRFILLEKLVE-NTKEIFKRIK---CKNKKLIKNIMKDMLTTLEYIHE---HGISHGDIKPENIMVDGNN  163 (294)
T ss_pred             eeeEecCCceEEEEEEehhcc-CHHHHHHhhc---cCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEcCCC
Confidence            7654332   23677777643 6666664322   35788899999999999999998   9999999999999999999


Q ss_pred             CeeeeeeccceecCCCCc------ceeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHH
Q 005257          506 NGRLGDFGLARMHGHGQV------ASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEM  579 (705)
Q Consensus       506 ~~kL~DFGla~~~~~~~~------~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~  579 (705)
                      .++|+|||+|+.+.....      .......||+.|+|||++.+..++.++|||||||++|||++|+.||....... ..
T Consensus       164 ~~~l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~~~~~~~~~DiwSlG~~l~el~~g~~P~~~~~~~~-~~  242 (294)
T PHA02882        164 RGYIIDYGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHNGACVTRRGDLESLGYCMLKWAGIKLPWKGFGHNG-NL  242 (294)
T ss_pred             cEEEEEcCCceeeccCCcccccccccccccCCCccccCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCccccch-HH
Confidence            999999999987643221      11122469999999999999999999999999999999999999997652211 11


Q ss_pred             HHHHHHhCchhHHHHHhhhcCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHH
Q 005257          580 VWELMVQGKLLDALDARLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLE  637 (705)
Q Consensus       580 v~~~~~~~~~~~~id~~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  637 (705)
                      +....  ......+.....    ........+.+++..||+.+|++||++.++++.|+
T Consensus       243 ~~~~~--~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~rp~~~~l~~~~~  294 (294)
T PHA02882        243 IHAAK--CDFIKRLHEGKI----KIKNANKFIYDFIECVTKLSYEEKPDYDALIKIFD  294 (294)
T ss_pred             HHHhH--HHHHHHhhhhhh----ccCCCCHHHHHHHHHHHhCCCCCCCCHHHHHHhhC
Confidence            10000  001111111100    01123466889999999999999999999998763

>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

Probab=100.00  E-value=3e-34  Score=300.13  Aligned_cols=242  Identities=26%  Similarity=0.381  Sum_probs=192.6

Q ss_pred             EeecCceEEEEEEEcCCCeEEEEEEeccCC---chhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEEEEeeCCCCC
Q 005257          372 IGVGGNGKVYKGVLEGGGAEIAVKRISHEN---DGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGS  448 (705)
Q Consensus       372 LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~---~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~lV~E~~~~gs  448 (705)
                      ||+|+||+||++....+++.+|+|.+....   ....+.+.+|+++++.++|||++++++.+.. .+..++||||+++++
T Consensus         1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~~lv~e~~~~~~   79 (277)
T cd05577           1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAFET-KDDLCLVMTLMNGGD   79 (277)
T ss_pred             CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEEec-CCeEEEEEecCCCCc
Confidence            689999999999999889999999986532   2234567889999999999999999998875 678899999999999


Q ss_pred             hhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecCCCCcceeee
Q 005257          449 LDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTR  528 (705)
Q Consensus       449 L~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~~~~~~~~~~  528 (705)
                      |.+++.+... ..+++.++..++.|++.||.|||+   .+++||||+|+||+++.++.+||+|||++........  ...
T Consensus        80 L~~~l~~~~~-~~~~~~~~~~~~~ql~~~l~~lH~---~~i~H~di~p~Nil~~~~~~~~l~dfg~~~~~~~~~~--~~~  153 (277)
T cd05577          80 LKYHIYNVGE-PGFPEARAIFYAAQIICGLEHLHQ---RRIVYRDLKPENVLLDDHGNVRISDLGLAVELKGGKK--IKG  153 (277)
T ss_pred             HHHHHHHcCc-CCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCHHHEEECCCCCEEEccCcchhhhccCCc--ccc
Confidence            9999976543 368999999999999999999998   9999999999999999999999999999876543221  222


Q ss_pred             eeccccCCCccccccCCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhHHHHHhhhcCCCCCHHHH
Q 005257          529 VVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRAKGGFDEDEV  608 (705)
Q Consensus       529 ~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~l~~~~~~~~~~~  608 (705)
                      ..++..|+|||++.+..++.++|||||||+++||++|+.||.........   ..+....        .......+....
T Consensus       154 ~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~---~~~~~~~--------~~~~~~~~~~~~  222 (277)
T cd05577         154 RAGTPGYMAPEVLQGEVYDFSVDWFALGCTLYEMIAGRSPFRQRKEKVEK---EELKRRT--------LEMAVEYPDKFS  222 (277)
T ss_pred             ccCCCCcCCHHHhcCCCCCchhhhHHHHHHHHHHhhCCCCCCCCcccccH---HHHHhcc--------ccccccCCccCC
Confidence            46788999999998888999999999999999999999999764321100   0011100        000112223345


Q ss_pred             HHHHHHHHHcCCCCCCCCCCHHH
Q 005257          609 ERVLHLGLLCAYPDPRARPTMRQ  631 (705)
Q Consensus       609 ~~l~~l~~~Cl~~dP~~RPs~~e  631 (705)
                      ..+.+++..||+.+|++||+.++
T Consensus       223 ~~~~~li~~~l~~~p~~R~~~~~  245 (277)
T cd05577         223 PEAKDLCEALLQKDPEKRLGCRG  245 (277)
T ss_pred             HHHHHHHHHHccCChhHccCCCc
Confidence            67889999999999999994444

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of

>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

Probab=100.00  E-value=4e-34  Score=301.56  Aligned_cols=265  Identities=25%  Similarity=0.296  Sum_probs=198.1

Q ss_pred             CCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCCc--hhHHHHHHHHHHhccCC-CCCcceeeeeeeeccC----c
Q 005257          364 KGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHEND--GGTRAFLAEISSLGRLK-HKSLVGLRGWCKREKG----S  436 (705)
Q Consensus       364 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~--~~~~~~~~Ei~~l~~l~-Hpniv~l~g~~~~~~~----~  436 (705)
                      ++|+..+.||+|+||.||+|.+..+++.||||++.....  .....+.+|+.+++.++ ||||+++++++.....    .
T Consensus         1 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~~   80 (295)
T cd07837           1 DAYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKPS   80 (295)
T ss_pred             CCceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhccccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCce
Confidence            468889999999999999999998999999998765432  23467889999999995 6999999998865332    3


Q ss_pred             eEEEEeeCCCCChhHHHHhcCC--CCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEcc-CCCeeeeeec
Q 005257          437 LMLVYDYMENGSLDKWIFQCDG--SMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDK-EMNGRLGDFG  513 (705)
Q Consensus       437 ~~lV~E~~~~gsL~~~L~~~~~--~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~-~~~~kL~DFG  513 (705)
                      .++||||+++ +|.+++.....  ...+++..+..++.||+.||.|||+   ++++||||||+||+++. ++.+||+|||
T Consensus        81 ~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~---~~i~H~dl~~~nil~~~~~~~~kl~dfg  156 (295)
T cd07837          81 LYLVFEYLDS-DLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHK---HGVMHRDLKPQNLLVDKQKGLLKIADLG  156 (295)
T ss_pred             EEEEeeccCc-CHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHH---CCeeecCCChHHEEEecCCCeEEEeecc
Confidence            7999999985 89888865432  2468999999999999999999998   99999999999999998 8899999999


Q ss_pred             cceecCCCCcceeeeeeccccCCCcccccc-CCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHh-CchhH
Q 005257          514 LARMHGHGQVASTTRVVGTVGYLAPEVFSS-GRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQ-GKLLD  591 (705)
Q Consensus       514 la~~~~~~~~~~~~~~~gt~~y~APE~~~~-~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~-~~~~~  591 (705)
                      +++........ .....+++.|+|||++.+ ..++.++||||||+++|||++|..||.....  .......... +....
T Consensus       157 ~~~~~~~~~~~-~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~--~~~~~~~~~~~~~~~~  233 (295)
T cd07837         157 LGRAFSIPVKS-YTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFPGDSE--LQQLLHIFKLLGTPTE  233 (295)
T ss_pred             cceecCCCccc-cCCcccccCCCChHHhhCCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCH--HHHHHHHHHHhCCCCh
Confidence            99865432211 122356889999998865 4578999999999999999999999976432  1111111110 00000


Q ss_pred             HHHHh---------hhcC-----CCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 005257          592 ALDAR---------LRAK-----GGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKV  635 (705)
Q Consensus       592 ~id~~---------l~~~-----~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  635 (705)
                      ...+.         ....     ....+.....+.+++..||++||.+||++.|++.+
T Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~R~~~~eil~~  291 (295)
T cd07837         234 QVWPGVSKLRDWHEFPQWKPQDLSRAVPDLSPEGLDLLQKMLRYDPAKRISAKAALTH  291 (295)
T ss_pred             hhCcchhhccchhhcCcccchhHHHhccccCHHHHHHHHHHccCChhhcCCHHHHhcC
Confidence            00000         0000     00001234568899999999999999999998763

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm

>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3

Probab=100.00  E-value=3.5e-34  Score=300.30  Aligned_cols=243  Identities=23%  Similarity=0.310  Sum_probs=188.9

Q ss_pred             EEeecCceEEEEEEEcCCCeEEEEEEeccCC---chhHHHHHHHHHH---hccCCCCCcceeeeeeeeccCceEEEEeeC
Q 005257          371 VIGVGGNGKVYKGVLEGGGAEIAVKRISHEN---DGGTRAFLAEISS---LGRLKHKSLVGLRGWCKREKGSLMLVYDYM  444 (705)
Q Consensus       371 ~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~---~~~~~~~~~Ei~~---l~~l~Hpniv~l~g~~~~~~~~~~lV~E~~  444 (705)
                      .||+|+||.||++....+++.+|+|.+....   ......+.+|..+   +...+|||++.+.+.+.. .+..++||||+
T Consensus         1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~~~lv~e~~   79 (279)
T cd05633           1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHT-PDKLCFILDLM   79 (279)
T ss_pred             CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEec-CCeEEEEEecC
Confidence            4899999999999999889999999886542   1222334455443   334479999999998876 56889999999


Q ss_pred             CCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecCCCCcc
Q 005257          445 ENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVA  524 (705)
Q Consensus       445 ~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~~~~~~  524 (705)
                      ++|+|.+++....   .+++..+..++.|++.||.|||+   .+++||||||+|||+++++.++|+|||++........ 
T Consensus        80 ~~~~L~~~i~~~~---~l~~~~~~~i~~qi~~al~~lH~---~~ivH~dikp~Nil~~~~~~~~l~dfg~~~~~~~~~~-  152 (279)
T cd05633          80 NGGDLHYHLSQHG---VFSEKEMRFYATEIILGLEHMHN---RFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKP-  152 (279)
T ss_pred             CCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHH---CCcCCCCCCHHHEEECCCCCEEEccCCcceeccccCc-
Confidence            9999999886543   69999999999999999999998   9999999999999999999999999999976543221 


Q ss_pred             eeeeeeccccCCCcccccc-CCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhHHHHHhhhcCCCC
Q 005257          525 STTRVVGTVGYLAPEVFSS-GRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRAKGGF  603 (705)
Q Consensus       525 ~~~~~~gt~~y~APE~~~~-~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~l~~~~~~  603 (705)
                        ....|+..|+|||.+.+ ..++.++|||||||++|||++|+.||................          ..  ....
T Consensus       153 --~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~----------~~--~~~~  218 (279)
T cd05633         153 --HASVGTHGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTL----------TV--NVEL  218 (279)
T ss_pred             --cCcCCCcCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCCCCCcCHHHHHHHhh----------cC--CcCC
Confidence              22468999999999864 458899999999999999999999997543221111111110          00  1222


Q ss_pred             CHHHHHHHHHHHHHcCCCCCCCCC-----CHHHHHHH
Q 005257          604 DEDEVERVLHLGLLCAYPDPRARP-----TMRQVVKV  635 (705)
Q Consensus       604 ~~~~~~~l~~l~~~Cl~~dP~~RP-----s~~evl~~  635 (705)
                      +......+.+++..|++.||++||     ++++++++
T Consensus       219 ~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~h  255 (279)
T cd05633         219 PDSFSPELKSLLEGLLQRDVSKRLGCLGRGAQEVKEH  255 (279)
T ss_pred             ccccCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHhC
Confidence            334456788999999999999999     58888775

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi

>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

Probab=100.00  E-value=5.1e-34  Score=293.64  Aligned_cols=250  Identities=23%  Similarity=0.346  Sum_probs=206.2

Q ss_pred             CCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccC--CchhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEEEEe
Q 005257          365 GFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHE--NDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYD  442 (705)
Q Consensus       365 ~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~--~~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~lV~E  442 (705)
                      +|+..+.||+|++|.||++....+++.+|+|++...  ......++.+|+++++.++|+||+++.+++.. ....++|+|
T Consensus         1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~~~v~e   79 (256)
T cd08530           1 DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPNIISYKEAFLD-GNKLCIVME   79 (256)
T ss_pred             CceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhccHHHHHHHHHHHHHHHhCCCCCchhhhhhhcc-CCEEEEEeh
Confidence            477889999999999999999988999999998754  23445678899999999999999999998876 578999999


Q ss_pred             eCCCCChhHHHHhcC-CCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecCCC
Q 005257          443 YMENGSLDKWIFQCD-GSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHG  521 (705)
Q Consensus       443 ~~~~gsL~~~L~~~~-~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~~~  521 (705)
                      |+++++|.+++.+.. ....+++..++.++.|++.||.|||+   .+++|+||+|+||++++++.+||+|||+++.....
T Consensus        80 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~---~~i~h~~l~~~ni~~~~~~~~kl~d~g~~~~~~~~  156 (256)
T cd08530          80 YAPFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHE---QKILHRDLKSANILLVANDLVKIGDLGISKVLKKN  156 (256)
T ss_pred             hcCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhh---CCcccCCCCcceEEEecCCcEEEeeccchhhhccC
Confidence            999999999986632 12368999999999999999999998   99999999999999999999999999999876554


Q ss_pred             CcceeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhHHHHHhhhcCC
Q 005257          522 QVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRAKG  601 (705)
Q Consensus       522 ~~~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~l~~~~  601 (705)
                      .   .....++..|++||.+.+..++.++|+||||+++|||++|+.||......   ........+..           .
T Consensus       157 ~---~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~---~~~~~~~~~~~-----------~  219 (256)
T cd08530         157 M---AKTQIGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFEARSMQ---DLRYKVQRGKY-----------P  219 (256)
T ss_pred             C---cccccCCccccCHHHHCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH---HHHHHHhcCCC-----------C
Confidence            2   12245788999999998888999999999999999999999999765421   11111111111           2


Q ss_pred             CCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 005257          602 GFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKV  635 (705)
Q Consensus       602 ~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  635 (705)
                      ..+......+.+++..|++.+|++||++.++++.
T Consensus       220 ~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~  253 (256)
T cd08530         220 PIPPIYSQDLQNFIRSMLQVKPKLRPNCDKILAS  253 (256)
T ss_pred             CCchhhCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence            2233455678999999999999999999999864

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an

>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=4.6e-34  Score=296.39  Aligned_cols=252  Identities=25%  Similarity=0.389  Sum_probs=201.3

Q ss_pred             CCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccC-----CchhHHHHHHHHHHhccCCCCCcceeeeeeeec-cCce
Q 005257          364 KGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHE-----NDGGTRAFLAEISSLGRLKHKSLVGLRGWCKRE-KGSL  437 (705)
Q Consensus       364 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~-----~~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~-~~~~  437 (705)
                      .+|+..+.||+|+||.||+|.+..+++.||+|.+...     .....+.+.+|++++++++||||+++++++... ...+
T Consensus         2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~   81 (264)
T cd06653           2 VNWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDPEEKKL   81 (264)
T ss_pred             CceeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcCCCCEE
Confidence            4688899999999999999999988999999987532     223456789999999999999999999987653 3467


Q ss_pred             EEEEeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeecccee
Q 005257          438 MLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARM  517 (705)
Q Consensus       438 ~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~  517 (705)
                      ++++||+++++|.+++....   .+++..+.+++.|++.||.|||+   .+++|+||||+||+++.++.++|+|||+++.
T Consensus        82 ~~v~e~~~~~~L~~~~~~~~---~l~~~~~~~~~~~i~~al~~LH~---~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~  155 (264)
T cd06653          82 SIFVEYMPGGSIKDQLKAYG---ALTENVTRRYTRQILQGVSYLHS---NMIVHRDIKGANILRDSAGNVKLGDFGASKR  155 (264)
T ss_pred             EEEEEeCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHh---CCEecCCCCHHHEEEcCCCCEEECccccccc
Confidence            89999999999999986533   57899999999999999999998   9999999999999999999999999999986


Q ss_pred             cCCCCc--ceeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhHHHHH
Q 005257          518 HGHGQV--ASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDA  595 (705)
Q Consensus       518 ~~~~~~--~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~  595 (705)
                      ......  .......|+..|+|||++.+..++.++|||||||++|||++|+.||.....  ...+......+        
T Consensus       156 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~--~~~~~~~~~~~--------  225 (264)
T cd06653         156 IQTICMSGTGIKSVTGTPYWMSPEVISGEGYGRKADVWSVACTVVEMLTEKPPWAEYEA--MAAIFKIATQP--------  225 (264)
T ss_pred             cccccccCccccccCCcccccCHhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCccCH--HHHHHHHHcCC--------
Confidence            532111  112235688999999999888899999999999999999999999975422  11111111000        


Q ss_pred             hhhcCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 005257          596 RLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKV  635 (705)
Q Consensus       596 ~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  635 (705)
                         .....+....+.+.+++..||+ +|..||+..+++.+
T Consensus       226 ---~~~~~p~~~~~~~~~~i~~~l~-~~~~r~~~~~~~~~  261 (264)
T cd06653         226 ---TKPMLPDGVSDACRDFLKQIFV-EEKRRPTAEFLLRH  261 (264)
T ss_pred             ---CCCCCCcccCHHHHHHHHHHhc-CcccCccHHHHhcC
Confidence               0122344455678999999999 57999999987753

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho

>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

Probab=100.00  E-value=5.5e-34  Score=303.08  Aligned_cols=265  Identities=26%  Similarity=0.348  Sum_probs=199.9

Q ss_pred             hCCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCCc--hhHHHHHHHHHHhccCCCCCcceeeeeeeecc-CceEE
Q 005257          363 TKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHEND--GGTRAFLAEISSLGRLKHKSLVGLRGWCKREK-GSLML  439 (705)
Q Consensus       363 t~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~--~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~-~~~~l  439 (705)
                      .++|+..+.||+|+||.||+|.+..+++.||+|+++....  .....+.+|+.++++++|+||+++++++.... +.+++
T Consensus         6 ~~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~l   85 (309)
T cd07845           6 VTEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLRHPNIVELKEVVVGKHLDSIFL   85 (309)
T ss_pred             ccceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCCCCcchhhHHHHHHHhCCCCCCcceEEEEecCCCCeEEE
Confidence            4578899999999999999999998999999999865432  22345678999999999999999999886533 46899


Q ss_pred             EEeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecC
Q 005257          440 VYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHG  519 (705)
Q Consensus       440 V~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~  519 (705)
                      ||||+++ +|.+++....  ..+++.++..++.|++.||.|||+   .+++||||||+||+++.++.+||+|||++....
T Consensus        86 v~e~~~~-~l~~~l~~~~--~~l~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~nil~~~~~~~kL~dfg~~~~~~  159 (309)
T cd07845          86 VMEYCEQ-DLASLLDNMP--TPFSESQVKCLMLQLLRGLQYLHE---NFIIHRDLKVSNLLLTDKGCLKIADFGLARTYG  159 (309)
T ss_pred             EEecCCC-CHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEECCCCCEEECccceeeecC
Confidence            9999964 8888886543  368999999999999999999998   999999999999999999999999999998765


Q ss_pred             CCCcceeeeeeccccCCCcccccc-CCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHh-CchhHHHHH--
Q 005257          520 HGQVASTTRVVGTVGYLAPEVFSS-GRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQ-GKLLDALDA--  595 (705)
Q Consensus       520 ~~~~~~~~~~~gt~~y~APE~~~~-~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~-~~~~~~id~--  595 (705)
                      .... ......++..|+|||.+.+ ..++.++|||||||++|||++|+.||......  +.+...... +.....+.+  
T Consensus       160 ~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~~f~~~~~~--~~~~~~~~~~~~~~~~~~~~~  236 (309)
T cd07845         160 LPAK-PMTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLPGKSEI--EQLDLIIQLLGTPNESIWPGF  236 (309)
T ss_pred             CccC-CCCcccccccccChhhhcCCCCcCchHHHHHHHHHHHHHHhCCCCCCCCCHH--HHHHHHHHhcCCCChhhchhh
Confidence            4321 1222345788999999865 45789999999999999999999999764421  111111110 000000000  


Q ss_pred             -------hhhcC-CCCC------HHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Q 005257          596 -------RLRAK-GGFD------EDEVERVLHLGLLCAYPDPRARPTMRQVVKVL  636 (705)
Q Consensus       596 -------~l~~~-~~~~------~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L  636 (705)
                             ..... ..+.      ....+.+.+++..|++.||++|||+.+++.+-
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~~il~h~  291 (309)
T cd07845         237 SDLPLVGKFTLPKQPYNNLKHKFPWLSEAGLRLLNFLLMYDPKKRATAEEALESS  291 (309)
T ss_pred             hcccccccccccCCCCCchHHhccccCHHHHHHHHHHhcCChhhCcCHHHHhcCh
Confidence                   00000 0000      01235577899999999999999999998753

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing

>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

Probab=100.00  E-value=6e-34  Score=302.05  Aligned_cols=265  Identities=25%  Similarity=0.358  Sum_probs=196.9

Q ss_pred             CCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCC--chhHHHHHHHHHHhccCCCCCcceeeeeeeecc-------
Q 005257          364 KGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHEN--DGGTRAFLAEISSLGRLKHKSLVGLRGWCKREK-------  434 (705)
Q Consensus       364 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~--~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~-------  434 (705)
                      ++|+..+.||+|+||.||+|....+++.||||++....  ......+.+|++++++++||||++++++|...+       
T Consensus        12 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~   91 (310)
T cd07865          12 SKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPYNRYK   91 (310)
T ss_pred             hheEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcCCchhHHHHHHHHHHhCCCCCccceEEEEecccccccCCC
Confidence            46888999999999999999999899999999986543  223345678999999999999999999886532       


Q ss_pred             CceEEEEeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeecc
Q 005257          435 GSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGL  514 (705)
Q Consensus       435 ~~~~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGl  514 (705)
                      ...++||||+.+ +|.+++....  ..+++.++..++.|++.||.|||+   .+++|+||||+||+++.++.+||+|||+
T Consensus        92 ~~~~lv~e~~~~-~l~~~l~~~~--~~~~~~~~~~i~~qi~~al~~lH~---~~i~H~dl~p~nil~~~~~~~kl~dfg~  165 (310)
T cd07865          92 GSFYLVFEFCEH-DLAGLLSNKN--VKFTLSEIKKVMKMLLNGLYYIHR---NKILHRDMKAANILITKDGILKLADFGL  165 (310)
T ss_pred             ceEEEEEcCCCc-CHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHH---CCeeccCCCHHHEEECCCCcEEECcCCC
Confidence            346999999964 8888876533  258999999999999999999998   8999999999999999999999999999


Q ss_pred             ceecCCCCcc---eeeeeeccccCCCccccccC-CCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchh
Q 005257          515 ARMHGHGQVA---STTRVVGTVGYLAPEVFSSG-RASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLL  590 (705)
Q Consensus       515 a~~~~~~~~~---~~~~~~gt~~y~APE~~~~~-~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~  590 (705)
                      +.........   ......++..|+|||.+.+. .++.++||||||+++|||++|+.||..............+. +...
T Consensus       166 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~el~t~~~~~~~~~~~~~~~~~~~~~-~~~~  244 (310)
T cd07865         166 ARAFSLSKNSKPNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMWTRSPIMQGNTEQHQLTLISQLC-GSIT  244 (310)
T ss_pred             cccccCCcccCCCCccCcccCccccCcHHhcCCcccCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHh-CCCC
Confidence            9866432221   11234578899999988664 47889999999999999999999997654321111111110 1111


Q ss_pred             HHHHHh---------hhcCCCC---------CHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 005257          591 DALDAR---------LRAKGGF---------DEDEVERVLHLGLLCAYPDPRARPTMRQVVKV  635 (705)
Q Consensus       591 ~~id~~---------l~~~~~~---------~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  635 (705)
                      ..+.+.         +......         ...+...+.+++..||+.||++|||+.+++++
T Consensus       245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~dli~~~l~~~P~~R~t~~e~l~h  307 (310)
T cd07865         245 PEVWPGVDKLELFKKMELPQGQKRKVKERLKPYVKDPHALDLIDKLLVLDPAKRIDADTALNH  307 (310)
T ss_pred             hhhcccccchhhhhhccCCCccchhhHHhcccccCCHHHHHHHHHHhcCChhhccCHHHHhcC
Confidence            000000         0000000         00012456789999999999999999998863

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl

>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

Probab=100.00  E-value=3.5e-34  Score=308.70  Aligned_cols=264  Identities=24%  Similarity=0.326  Sum_probs=200.9

Q ss_pred             hCCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccC--CchhHHHHHHHHHHhccCCCCCcceeeeeeeecc----Cc
Q 005257          363 TKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHE--NDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREK----GS  436 (705)
Q Consensus       363 t~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~--~~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~----~~  436 (705)
                      .++|...+.||+|+||.||+|....+++.||||.+...  .......+.+|+.+++.++||||+++++++....    ..
T Consensus         4 ~~~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~~~~   83 (337)
T cd07858           4 DTKYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHREAFND   83 (337)
T ss_pred             ccceeEEEEeccCCCeEEEEEEecCCCCeEEEEEecccccccchhHHHHHHHHHHHhcCCCCccchHHheecccccccCc
Confidence            45788999999999999999999989999999998653  2334556788999999999999999999876432    35


Q ss_pred             eEEEEeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccce
Q 005257          437 LMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLAR  516 (705)
Q Consensus       437 ~~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~  516 (705)
                      .++|+||+. ++|.+++....   .+++..+..++.|++.||.|||+   .+++||||||+||+++.++.+||+|||+++
T Consensus        84 ~~lv~e~~~-~~L~~~~~~~~---~l~~~~~~~i~~qi~~aL~~LH~---~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~  156 (337)
T cd07858          84 VYIVYELMD-TDLHQIIRSSQ---TLSDDHCQYFLYQLLRGLKYIHS---ANVLHRDLKPSNLLLNANCDLKICDFGLAR  156 (337)
T ss_pred             EEEEEeCCC-CCHHHHHhcCC---CCCHHHHHHHHHHHHHHHHHHHh---CCEecCCCCHHHEEEcCCCCEEECcCcccc
Confidence            799999996 68988886432   68999999999999999999998   999999999999999999999999999998


Q ss_pred             ecCCCCcceeeeeeccccCCCcccccc-CCCCccccEEEEehhHHHHhhCCCCCCCCCcc-HHHHHHHHH----------
Q 005257          517 MHGHGQVASTTRVVGTVGYLAPEVFSS-GRASTQTDVFGFGILILEVLSGRRPIEEGKPN-LVEMVWELM----------  584 (705)
Q Consensus       517 ~~~~~~~~~~~~~~gt~~y~APE~~~~-~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~-~~~~v~~~~----------  584 (705)
                      ...... .......++..|+|||.+.. ..++.++|||||||++|||++|+.||...... .........          
T Consensus       157 ~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (337)
T cd07858         157 TTSEKG-DFMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGKDYVHQLKLITELLGSPSEEDLGF  235 (337)
T ss_pred             ccCCCc-ccccccccccCccChHHHhcCCCCCCcccHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCChHHhhh
Confidence            664432 12233467889999998865 46899999999999999999999999754321 000001000          


Q ss_pred             -HhCchhHHHHHhhhcCC-----CCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 005257          585 -VQGKLLDALDARLRAKG-----GFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKV  635 (705)
Q Consensus       585 -~~~~~~~~id~~l~~~~-----~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  635 (705)
                       ..+.....+.. +....     .........+.+++.+||+.+|++|||+.+++++
T Consensus       236 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rps~~ell~h  291 (337)
T cd07858         236 IRNEKARRYIRS-LPYTPRQSFARLFPHANPLAIDLLEKMLVFDPSKRITVEEALAH  291 (337)
T ss_pred             cCchhhhHHHHh-cCcccccCHHHHcccCCHHHHHHHHHHhcCChhhccCHHHHHcC
Confidence             00000000000 00000     0011234667899999999999999999999986

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati

>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

Probab=100.00  E-value=3.4e-34  Score=308.30  Aligned_cols=266  Identities=25%  Similarity=0.330  Sum_probs=202.6

Q ss_pred             hCCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCC--chhHHHHHHHHHHhccCCCCCcceeeeeeee---ccCce
Q 005257          363 TKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHEN--DGGTRAFLAEISSLGRLKHKSLVGLRGWCKR---EKGSL  437 (705)
Q Consensus       363 t~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~--~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~---~~~~~  437 (705)
                      ..+|+..+.||+|++|.||+|....++..||+|++....  ....+.+.+|+.++++++||||+++++++..   ....+
T Consensus         4 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~   83 (334)
T cd07855           4 GSRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKHDNIIAIRDILRPPGADFKDV   83 (334)
T ss_pred             hhceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEeccccccccchHHHHHHHHHHHhcCCCCccCHHHhccccCCCCceE
Confidence            367888999999999999999999999999999987542  2345677889999999999999999997753   23468


Q ss_pred             EEEEeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeecccee
Q 005257          438 MLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARM  517 (705)
Q Consensus       438 ~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~  517 (705)
                      ++||||+. ++|.+++....   .+++..+..++.|++.||.|||+   .+++||||||+||++++++.+||+|||+++.
T Consensus        84 ~lv~e~~~-~~l~~~~~~~~---~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~dlkp~Nil~~~~~~~kl~dfg~~~~  156 (334)
T cd07855          84 YVVMDLME-SDLHHIIHSDQ---PLTEEHIRYFLYQLLRGLKYIHS---ANVIHRDLKPSNLLVNEDCELRIGDFGMARG  156 (334)
T ss_pred             EEEEehhh-hhHHHHhccCC---CCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEEcCCCcEEeccccccee
Confidence            99999996 68988885432   58999999999999999999998   9999999999999999999999999999976


Q ss_pred             cCCCCcc---eeeeeeccccCCCcccccc-CCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHH---------
Q 005257          518 HGHGQVA---STTRVVGTVGYLAPEVFSS-GRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELM---------  584 (705)
Q Consensus       518 ~~~~~~~---~~~~~~gt~~y~APE~~~~-~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~---------  584 (705)
                      .......   ......|+..|+|||.+.+ ..++.++|||||||++|||++|+.||........-......         
T Consensus       157 ~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~~g~~pf~~~~~~~~~~~~~~~~g~~~~~~~  236 (334)
T cd07855         157 LSSSPTEHKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKNYVHQLKLILSVLGSPSEEVL  236 (334)
T ss_pred             ecccCcCCCcccccccccccccChHHhcCCcccccccchHHHHHHHHHHHcCCCccCCCChHHHHHHHHHHhCCChhHhh
Confidence            5433221   1223578999999999865 46899999999999999999999999764321110000000         


Q ss_pred             ---HhCchhHHHHHhhhcCCCCC-----HHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Q 005257          585 ---VQGKLLDALDARLRAKGGFD-----EDEVERVLHLGLLCAYPDPRARPTMRQVVKVL  636 (705)
Q Consensus       585 ---~~~~~~~~id~~l~~~~~~~-----~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L  636 (705)
                         ....+...++ ........+     ......+.+++..||+.+|++||++.+++.+-
T Consensus       237 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~~  295 (334)
T cd07855         237 NRIGSDRVRKYIQ-NLPRKQPVPWSKIFPKASPEALDLLSQMLQFDPEERITVEQALQHP  295 (334)
T ss_pred             hhhchhhHHHHHh-hcccCCCCCHHHHcccCCHHHHHHHHHHccCChhhCcCHHHHHhCh
Confidence               0000111111 111111111     12346789999999999999999999988853

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the

>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=100.00  E-value=1.8e-35  Score=338.74  Aligned_cols=253  Identities=28%  Similarity=0.372  Sum_probs=205.0

Q ss_pred             HhCCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccC--CchhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEE
Q 005257          362 ATKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHE--NDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLML  439 (705)
Q Consensus       362 at~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~--~~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~l  439 (705)
                      .+-+++....||.|.||.||-|...++|+-.|+|.+...  .....+...+|++++..|+|||+|+.+|+-.. ....+|
T Consensus      1233 V~~rWqrg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvH-Rekv~I 1311 (1509)
T KOG4645|consen 1233 VTFRWQRGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGLNHPNLVRYYGVEVH-REKVYI 1311 (1509)
T ss_pred             ceeeeccccccCCcceeeeEEeecCCccchhhhhhhhcCccccccCcchHHHHHHHHhccCccccccCceeec-HHHHHH
Confidence            344677788999999999999999999999999987543  23345678899999999999999999997665 667899


Q ss_pred             EEeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecC
Q 005257          440 VYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHG  519 (705)
Q Consensus       440 V~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~  519 (705)
                      .||||++|+|.+.+....   ..++....-+..|++.|++|||+   .+||||||||.||+|+.+|.+|++|||.|....
T Consensus      1312 FMEyC~~GsLa~ll~~gr---i~dE~vt~vyt~qll~gla~LH~---~gIVHRDIK~aNI~Ld~~g~iK~~DFGsa~ki~ 1385 (1509)
T KOG4645|consen 1312 FMEYCEGGSLASLLEHGR---IEDEMVTRVYTKQLLEGLAYLHE---HGIVHRDIKPANILLDFNGLIKYGDFGSAVKIK 1385 (1509)
T ss_pred             HHHHhccCcHHHHHHhcc---hhhhhHHHHHHHHHHHHHHHHHh---cCceecCCCccceeeecCCcEEeecccceeEec
Confidence            999999999999996532   35666667788999999999998   999999999999999999999999999998776


Q ss_pred             CCCc---ceeeeeeccccCCCccccccC---CCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHH-HHHhCchhHH
Q 005257          520 HGQV---ASTTRVVGTVGYLAPEVFSSG---RASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWE-LMVQGKLLDA  592 (705)
Q Consensus       520 ~~~~---~~~~~~~gt~~y~APE~~~~~---~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~-~~~~~~~~~~  592 (705)
                      ....   ......+||+-|||||++.+.   ...-+.||||+|||++||+||++||...+.+   |... .+..|..   
T Consensus      1386 ~~~~~~~~el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~dne---~aIMy~V~~gh~--- 1459 (1509)
T KOG4645|consen 1386 NNAQTMPGELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELDNE---WAIMYHVAAGHK--- 1459 (1509)
T ss_pred             CchhcCCHHHHhhcCCchhcCchhhcccccCCCCcchhhhcccceEEEeecCCCchhhccch---hHHHhHHhccCC---
Confidence            5421   223457899999999999763   3567899999999999999999999875543   2211 1222222   


Q ss_pred             HHHhhhcCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 005257          593 LDARLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKV  635 (705)
Q Consensus       593 id~~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  635 (705)
                              +.++......-.+++..|+..||.+|.++.|++++
T Consensus      1460 --------Pq~P~~ls~~g~dFle~Cl~~dP~~Rw~~~qlle~ 1494 (1509)
T KOG4645|consen 1460 --------PQIPERLSSEGRDFLEHCLEQDPKMRWTASQLLEH 1494 (1509)
T ss_pred             --------CCCchhhhHhHHHHHHHHHhcCchhhhHHHHHHHh
Confidence                    34455556667889999999999999998877765

>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]

Probab=100.00  E-value=4.4e-35  Score=303.62  Aligned_cols=249  Identities=27%  Similarity=0.385  Sum_probs=207.6

Q ss_pred             hCCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccC---CchhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEE
Q 005257          363 TKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHE---NDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLML  439 (705)
Q Consensus       363 t~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~---~~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~l  439 (705)
                      .+.|+.-++||+||||.||-++.+.+|+.+|+|++.+.   .+.+..--++|-.+|.+++.+.||.+--.+.. ++.++|
T Consensus       184 ~n~F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~FiVslaYAfeT-kd~LCl  262 (591)
T KOG0986|consen  184 KNTFRVYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFIVSLAYAFET-KDALCL  262 (591)
T ss_pred             ccceeeeEEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcEEEEeeeecC-CCceEE
Confidence            45688899999999999999999999999999988654   23444556889999999999988887665554 889999


Q ss_pred             EEeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecC
Q 005257          440 VYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHG  519 (705)
Q Consensus       440 V~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~  519 (705)
                      |+..|.||+|.-+|++.+.. .+++...+-++.+|+.||.+||+   ..||.|||||+|||||+.|+++|+|.|||..+.
T Consensus       263 VLtlMNGGDLkfHiyn~g~~-gF~e~ra~FYAAEi~cGLehlH~---~~iVYRDLKPeNILLDd~GhvRISDLGLAvei~  338 (591)
T KOG0986|consen  263 VLTLMNGGDLKFHIYNHGNP-GFDEQRARFYAAEIICGLEHLHR---RRIVYRDLKPENILLDDHGHVRISDLGLAVEIP  338 (591)
T ss_pred             EEEeecCCceeEEeeccCCC-CCchHHHHHHHHHHHhhHHHHHh---cceeeccCChhheeeccCCCeEeeccceEEecC
Confidence            99999999999999887653 79999999999999999999998   999999999999999999999999999999887


Q ss_pred             CCCcceeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhHHHHHhhhc
Q 005257          520 HGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRA  599 (705)
Q Consensus       520 ~~~~~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~l~~  599 (705)
                      .++....  .+||.+|||||++.++.|+...|.||+||+||||+.|+.||....+.        +    -.+.+|.+...
T Consensus       339 ~g~~~~~--rvGT~GYMAPEvl~ne~Y~~s~Dwf~lGCllYemi~G~sPFr~~KeK--------v----k~eEvdrr~~~  404 (591)
T KOG0986|consen  339 EGKPIRG--RVGTVGYMAPEVLQNEVYDFSPDWFSLGCLLYEMIAGHSPFRQRKEK--------V----KREEVDRRTLE  404 (591)
T ss_pred             CCCcccc--ccCcccccCHHHHcCCcccCCccHHHHHhHHHHHHcccCchhhhhhh--------h----hHHHHHHHHhc
Confidence            7654332  38999999999999999999999999999999999999999754321        0    11233433322


Q ss_pred             -CCCCCHHHHHHHHHHHHHcCCCCCCCCCCHH
Q 005257          600 -KGGFDEDEVERVLHLGLLCAYPDPRARPTMR  630 (705)
Q Consensus       600 -~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~  630 (705)
                       ...++....+....+....++.||.+|--.+
T Consensus       405 ~~~ey~~kFS~eakslc~~LL~Kdp~~RLGcr  436 (591)
T KOG0986|consen  405 DPEEYSDKFSEEAKSLCEGLLTKDPEKRLGCR  436 (591)
T ss_pred             chhhcccccCHHHHHHHHHHHccCHHHhccCC
Confidence             2345666667788888888999999986433

>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

Probab=100.00  E-value=5.2e-34  Score=301.14  Aligned_cols=246  Identities=23%  Similarity=0.335  Sum_probs=198.7

Q ss_pred             ceEEeecCceEEEEEEEcCCCeEEEEEEeccCCchhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEEEEeeCCCCC
Q 005257          369 ENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGS  448 (705)
Q Consensus       369 ~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~lV~E~~~~gs  448 (705)
                      ..+||+|+||.||++....+++.||||++..........+.+|+.+++.++|+|++++++.+.. .+..++||||+++++
T Consensus        25 ~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~lv~e~~~~~~  103 (292)
T cd06657          25 FIKIGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLV-GDELWVVMEFLEGGA  103 (292)
T ss_pred             HHHcCCCCCeEEEEEEEcCCCeEEEEEEecccchhHHHHHHHHHHHHHhcCCcchhheeeEEEe-CCEEEEEEecCCCCc
Confidence            3569999999999999998999999999866555566778999999999999999999998876 678999999999999


Q ss_pred             hhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecCCCCcceeee
Q 005257          449 LDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTR  528 (705)
Q Consensus       449 L~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~~~~~~~~~~  528 (705)
                      |.+++...    .+++..+..++.|++.||+|||+   .+++|+||+|+||+++.++.++|+|||++........ ....
T Consensus       104 L~~~~~~~----~~~~~~~~~~~~ql~~~l~~lH~---~givH~dl~p~Nilv~~~~~~~l~dfg~~~~~~~~~~-~~~~  175 (292)
T cd06657         104 LTDIVTHT----RMNEEQIAAVCLAVLKALSVLHA---QGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVP-RRKS  175 (292)
T ss_pred             HHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEECCCCCEEEcccccceecccccc-cccc
Confidence            99987432    57899999999999999999998   8999999999999999999999999999876543221 2233


Q ss_pred             eeccccCCCccccccCCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhHHHHHhhhcCCCCCHHHH
Q 005257          529 VVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRAKGGFDEDEV  608 (705)
Q Consensus       529 ~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~l~~~~~~~~~~~  608 (705)
                      ..|++.|+|||.+.+..++.++||||+|+++|||++|..||......  +.+ .         .+...+...........
T Consensus       176 ~~~~~~y~~pE~~~~~~~~~~~Dv~slGvil~el~tg~~p~~~~~~~--~~~-~---------~~~~~~~~~~~~~~~~~  243 (292)
T cd06657         176 LVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPL--KAM-K---------MIRDNLPPKLKNLHKVS  243 (292)
T ss_pred             cccCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH--HHH-H---------HHHhhCCcccCCcccCC
Confidence            56889999999998888899999999999999999999999754321  111 1         11111110000111233


Q ss_pred             HHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 005257          609 ERVLHLGLLCAYPDPRARPTMRQVVKV  635 (705)
Q Consensus       609 ~~l~~l~~~Cl~~dP~~RPs~~evl~~  635 (705)
                      ..+.+++.+||+.+|.+||++.+++++
T Consensus       244 ~~l~~li~~~l~~~P~~R~~~~~ll~~  270 (292)
T cd06657         244 PSLKGFLDRLLVRDPAQRATAAELLKH  270 (292)
T ss_pred             HHHHHHHHHHHhCCcccCcCHHHHhcC
Confidence            457888999999999999999998873

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo

>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=5.5e-34  Score=294.84  Aligned_cols=245  Identities=24%  Similarity=0.315  Sum_probs=193.0

Q ss_pred             eEEeecCceEEEEEEEcCCCeEEEEEEeccCCc---hhHHHHHHHHHH-hccCCCCCcceeeeeeeeccCceEEEEeeCC
Q 005257          370 NVIGVGGNGKVYKGVLEGGGAEIAVKRISHEND---GGTRAFLAEISS-LGRLKHKSLVGLRGWCKREKGSLMLVYDYME  445 (705)
Q Consensus       370 ~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~---~~~~~~~~Ei~~-l~~l~Hpniv~l~g~~~~~~~~~~lV~E~~~  445 (705)
                      +.||+|+||.||+|....+++.||+|.+.....   .....+..|..+ ....+|+|++++++.+.. ++..++|+||++
T Consensus         2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~-~~~~~lv~e~~~   80 (260)
T cd05611           2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQS-KDYLYLVMEYLN   80 (260)
T ss_pred             ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEc-CCeEEEEEeccC
Confidence            468999999999999988899999999865422   223344555554 445589999999998875 678999999999


Q ss_pred             CCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecCCCCcce
Q 005257          446 NGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVAS  525 (705)
Q Consensus       446 ~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~~~~~~~  525 (705)
                      +++|.+++....   .+++..+..++.|++.||.|||+   .+++|+||+|+||++++++.+||+|||+++....     
T Consensus        81 ~~~L~~~l~~~~---~~~~~~~~~i~~qi~~aL~~lH~---~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~-----  149 (260)
T cd05611          81 GGDCASLIKTLG---GLPEDWAKQYIAEVVLGVEDLHQ---RGIIHRDIKPENLLIDQTGHLKLTDFGLSRNGLE-----  149 (260)
T ss_pred             CCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHeEECCCCcEEEeecccceeccc-----
Confidence            999999997543   58999999999999999999998   9999999999999999999999999999876433     


Q ss_pred             eeeeeccccCCCccccccCCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhHHHHHhhhcCCCCCH
Q 005257          526 TTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRAKGGFDE  605 (705)
Q Consensus       526 ~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~l~~~~~~~~  605 (705)
                      .....|+..|+|||.+.+..++.++||||||+++|||++|..||.....   ..++..+..+..        ........
T Consensus       150 ~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~---~~~~~~~~~~~~--------~~~~~~~~  218 (260)
T cd05611         150 NKKFVGTPDYLAPETILGVGDDKMSDWWSLGCVIFEFLFGYPPFHAETP---DAVFDNILSRRI--------NWPEEVKE  218 (260)
T ss_pred             cccCCCCcCccChhhhcCCCCcchhhhHHHHHHHHHHHHCCCCCCCCCH---HHHHHHHHhccc--------CCCCcccc
Confidence            1224678899999999888889999999999999999999999976432   122222222111        00011112


Q ss_pred             HHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHH
Q 005257          606 DEVERVLHLGLLCAYPDPRARPTMRQVVKVLE  637 (705)
Q Consensus       606 ~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  637 (705)
                      .....+.+++..||+.+|++||++.++.+.|.
T Consensus       219 ~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~l~  250 (260)
T cd05611         219 FCSPEAVDLINRLLCMDPAKRLGANGYQEIKS  250 (260)
T ss_pred             cCCHHHHHHHHHHccCCHHHccCCCcHHHHHc
Confidence            34567899999999999999998876666554

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do

>PLN00009 cyclin-dependent kinase A; Provisional

Probab=100.00  E-value=1.1e-33  Score=298.38  Aligned_cols=263  Identities=25%  Similarity=0.347  Sum_probs=197.5

Q ss_pred             CCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCC--chhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEEEE
Q 005257          364 KGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHEN--DGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVY  441 (705)
Q Consensus       364 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~--~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~lV~  441 (705)
                      ++|+..+.||+|++|.||+|....+++.||+|++....  ....+.+.+|++++++++||||+++++++.. +...++||
T Consensus         2 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~lv~   80 (294)
T PLN00009          2 DQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHS-EKRLYLVF   80 (294)
T ss_pred             CceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhccccccchHHHHHHHHHHHhccCCCEeeEEEEEec-CCeEEEEE
Confidence            46888999999999999999999889999999986542  2334678899999999999999999998876 67899999


Q ss_pred             eeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEcc-CCCeeeeeeccceecCC
Q 005257          442 DYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDK-EMNGRLGDFGLARMHGH  520 (705)
Q Consensus       442 E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~-~~~~kL~DFGla~~~~~  520 (705)
                      ||++ ++|.+++..... ..+++..+..++.||+.||+|||+   ++++|+||+|+||+++. ++.+||+|||++.....
T Consensus        81 e~~~-~~l~~~~~~~~~-~~~~~~~~~~~~~qi~~aL~~LH~---~~i~H~dl~p~nill~~~~~~~kl~dfg~~~~~~~  155 (294)
T PLN00009         81 EYLD-LDLKKHMDSSPD-FAKNPRLIKTYLYQILRGIAYCHS---HRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGI  155 (294)
T ss_pred             eccc-ccHHHHHHhCCC-CCcCHHHHHHHHHHHHHHHHHHHh---CCeeCCCCCcceEEEECCCCEEEEcccccccccCC
Confidence            9996 588887755432 246888899999999999999998   89999999999999985 56799999999976543


Q ss_pred             CCcceeeeeeccccCCCccccccC-CCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHh-CchhHHH-----
Q 005257          521 GQVASTTRVVGTVGYLAPEVFSSG-RASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQ-GKLLDAL-----  593 (705)
Q Consensus       521 ~~~~~~~~~~gt~~y~APE~~~~~-~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~-~~~~~~i-----  593 (705)
                      ... ......+++.|+|||++.+. .++.++|||||||++|||++|+.||......  +........ +......     
T Consensus       156 ~~~-~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~~~--~~~~~~~~~~~~~~~~~~~~~~  232 (294)
T PLN00009        156 PVR-TFTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEI--DELFKIFRILGTPNEETWPGVT  232 (294)
T ss_pred             Ccc-ccccCceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH--HHHHHHHHHhCCCChhhccccc
Confidence            221 11234678899999998664 5789999999999999999999999764321  111111110 0000000     


Q ss_pred             ---H--Hhhhc-CCC----CCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 005257          594 ---D--ARLRA-KGG----FDEDEVERVLHLGLLCAYPDPRARPTMRQVVKV  635 (705)
Q Consensus       594 ---d--~~l~~-~~~----~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  635 (705)
                         +  ..... ...    ..+.....+.+++.+|++.+|++||++.+++++
T Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~~l~~  284 (294)
T PLN00009        233 SLPDYKSAFPKWPPKDLATVVPTLEPAGVDLLSKMLRLDPSKRITARAALEH  284 (294)
T ss_pred             cchhhhhhcccCCCCCHHHhCcCCChHHHHHHHHHccCChhhCcCHHHHhcC
Confidence               0  00000 000    011223557889999999999999999999873

>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

Probab=100.00  E-value=2.3e-33  Score=293.84  Aligned_cols=260  Identities=23%  Similarity=0.332  Sum_probs=197.7

Q ss_pred             CCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCCc-hhHHHHHHHHHHhccCC-CCCcceeeeeeeeccCceEEEEee
Q 005257          366 FSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHEND-GGTRAFLAEISSLGRLK-HKSLVGLRGWCKREKGSLMLVYDY  443 (705)
Q Consensus       366 f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~-~~~~~~~~Ei~~l~~l~-Hpniv~l~g~~~~~~~~~~lV~E~  443 (705)
                      |...+.||+|++|.||+|+...+++.|+||++..... .......+|+..+.+++ |||++++++++.. ++..++||||
T Consensus         1 y~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~-~~~~~lv~e~   79 (283)
T cd07830           1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNEHPNIVKLKEVFRE-NDELYFVFEY   79 (283)
T ss_pred             CeeheeeccCCceEEEEEEECCCCcEEEEEEehhhccchhHHHHHHHHHHHHhccCCCCchhHHHHhhc-CCcEEEEEec
Confidence            5667899999999999999988899999999865432 22334567999999999 9999999998876 7789999999


Q ss_pred             CCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecCCCCc
Q 005257          444 MENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQV  523 (705)
Q Consensus       444 ~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~~~~~  523 (705)
                      + +|+|.+++..... ..+++.++..++.|++.+|.|||+   .+++|+||+|+||++++++.++|+|||++........
T Consensus        80 ~-~~~l~~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~Lh~---~~i~H~dl~~~ni~i~~~~~~~l~d~~~~~~~~~~~~  154 (283)
T cd07830          80 M-EGNLYQLMKDRKG-KPFSESVIRSIIYQILQGLAHIHK---HGFFHRDLKPENLLVSGPEVVKIADFGLAREIRSRPP  154 (283)
T ss_pred             C-CCCHHHHHHhccc-ccCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCChhhEEEcCCCCEEEeecccceeccCCCC
Confidence            9 7899998876542 368999999999999999999998   9999999999999999999999999999986643322


Q ss_pred             ceeeeeeccccCCCcccccc-CCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHh-Cc-h----------h
Q 005257          524 ASTTRVVGTVGYLAPEVFSS-GRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQ-GK-L----------L  590 (705)
Q Consensus       524 ~~~~~~~gt~~y~APE~~~~-~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~-~~-~----------~  590 (705)
                        .....++..|+|||++.. ..++.++||||||++++||++|+.||......  +.+...... +. .          .
T Consensus       155 --~~~~~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~  230 (283)
T cd07830         155 --YTDYVSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGSSEI--DQLYKICSVLGTPTKQDWPEGYKLA  230 (283)
T ss_pred             --cCCCCCcccccCceeeecCcCcCCccchhhHHHHHHHHHhCCCccCCCChH--HHHHHHHHhcCCCChhhhhhHhhhh
Confidence              123467889999998754 45789999999999999999999998654321  111111100 00 0          0


Q ss_pred             HHHHHhhhcCC-----CCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 005257          591 DALDARLRAKG-----GFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKV  635 (705)
Q Consensus       591 ~~id~~l~~~~-----~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  635 (705)
                      ..++..+....     .........+.+++..||+.+|++||+++|++..
T Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~  280 (283)
T cd07830         231 SKLGFRFPQFAPTSLHQLIPNASPEAIDLIKDMLRWDPKKRPTASQALQH  280 (283)
T ss_pred             ccccccccccccccHHHHcccCCHHHHHHHHHhcccCcccCCCHHHHhhC
Confidence            00000000000     0001113568899999999999999999998763

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili

>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

Probab=100.00  E-value=3.7e-34  Score=298.74  Aligned_cols=249  Identities=23%  Similarity=0.369  Sum_probs=204.2

Q ss_pred             CCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccC---CchhHHHHHHHHHHhccCC-CCCcceeeeeeeeccCceEE
Q 005257          364 KGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHE---NDGGTRAFLAEISSLGRLK-HKSLVGLRGWCKREKGSLML  439 (705)
Q Consensus       364 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~---~~~~~~~~~~Ei~~l~~l~-Hpniv~l~g~~~~~~~~~~l  439 (705)
                      ++|...+.||+|+||.||+|....+++.||+|++...   .....+.+.+|++++.+++ ||||+++++++.. ++..++
T Consensus         1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~-~~~~~l   79 (280)
T cd05581           1 DDFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQD-EENLYF   79 (280)
T ss_pred             CCceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcC-CceEEE
Confidence            4688899999999999999999988999999998653   2334567889999999998 9999999998875 678899


Q ss_pred             EEeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecC
Q 005257          440 VYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHG  519 (705)
Q Consensus       440 V~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~  519 (705)
                      ||||+++++|.+++.+..   .+++..+..++.|++.||.|||+   .+++|+||+|+||+++.++.++|+|||++....
T Consensus        80 v~e~~~~~~L~~~l~~~~---~l~~~~~~~i~~ql~~~l~~Lh~---~~~~H~dl~~~ni~i~~~~~~~l~df~~~~~~~  153 (280)
T cd05581          80 VLEYAPNGELLQYIRKYG---SLDEKCTRFYAAEILLALEYLHS---KGIIHRDLKPENILLDKDMHIKITDFGTAKVLD  153 (280)
T ss_pred             EEcCCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHH---CCeeecCCCHHHeEECCCCCEEecCCccccccC
Confidence            999999999999997643   69999999999999999999998   999999999999999999999999999987654


Q ss_pred             CCCc-------------------ceeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHH
Q 005257          520 HGQV-------------------ASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMV  580 (705)
Q Consensus       520 ~~~~-------------------~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v  580 (705)
                      ....                   .......|+..|+|||......++.++||||||++++|+++|+.||......  . .
T Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~--~-~  230 (280)
T cd05581         154 PNSSPESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPPFRGSNEY--L-T  230 (280)
T ss_pred             CccccccCCCCCccccccccccccccccccCCccccCHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCccHH--H-H
Confidence            3321                   1122346789999999998888999999999999999999999999765421  0 0


Q ss_pred             HHHHHhCchhHHHHHhhhcCCCCCHHHHHHHHHHHHHcCCCCCCCCCCH----HHHHH
Q 005257          581 WELMVQGKLLDALDARLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTM----RQVVK  634 (705)
Q Consensus       581 ~~~~~~~~~~~~id~~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~----~evl~  634 (705)
                      .....            .....++....+.+.+++..||+.+|++||++    .++++
T Consensus       231 ~~~~~------------~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~ll~  276 (280)
T cd05581         231 FQKIL------------KLEYSFPPNFPPDAKDLIEKLLVLDPQDRLGVNEGYDELKA  276 (280)
T ss_pred             HHHHH------------hcCCCCCCccCHHHHHHHHHHhcCCHhhCCCcccCHHHHhc
Confidence            01110            11122333345678999999999999999999    77665

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto

>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

Probab=100.00  E-value=9.9e-34  Score=299.23  Aligned_cols=254  Identities=24%  Similarity=0.388  Sum_probs=197.1

Q ss_pred             CCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCC-chhHHHHHHHHHHhccCC-CCCcceeeeeeeeccCceEEEE
Q 005257          364 KGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHEN-DGGTRAFLAEISSLGRLK-HKSLVGLRGWCKREKGSLMLVY  441 (705)
Q Consensus       364 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~-~~~~~~~~~Ei~~l~~l~-Hpniv~l~g~~~~~~~~~~lV~  441 (705)
                      ++|...+.||+|++|.||+|.+..+++.||||+++... .....++..|+.++.++. ||||++++++|.. +...++||
T Consensus        15 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~-~~~~~~v~   93 (296)
T cd06618          15 NDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVKCYGYFIT-DSDVFICM   93 (296)
T ss_pred             chheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCChHHHHHHHHHHHHHHhccCCCchHhhheeeec-CCeEEEEe
Confidence            55778899999999999999999889999999997543 334556777888777775 9999999999876 67899999


Q ss_pred             eeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecCCC
Q 005257          442 DYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHG  521 (705)
Q Consensus       442 E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~~~  521 (705)
                      ||++ ++|.+++.....  .+++..+..++.|++.||+|||+  ..+++||||+|+||++++++.+||+|||++......
T Consensus        94 e~~~-~~l~~l~~~~~~--~l~~~~~~~i~~~i~~~l~~lH~--~~~i~H~dl~p~nill~~~~~~kL~dfg~~~~~~~~  168 (296)
T cd06618          94 ELMS-TCLDKLLKRIQG--PIPEDILGKMTVAIVKALHYLKE--KHGVIHRDVKPSNILLDASGNVKLCDFGISGRLVDS  168 (296)
T ss_pred             eccC-cCHHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHh--hCCEecCCCcHHHEEEcCCCCEEECccccchhccCC
Confidence            9985 478777755332  68999999999999999999996  258999999999999999999999999998765432


Q ss_pred             CcceeeeeeccccCCCccccccCC----CCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhHHHHHhh
Q 005257          522 QVASTTRVVGTVGYLAPEVFSSGR----ASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDARL  597 (705)
Q Consensus       522 ~~~~~~~~~gt~~y~APE~~~~~~----~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~l  597 (705)
                      ...  ....++..|+|||.+.+..    ++.++||||||+++|||++|+.||...... .+.... ...+.        .
T Consensus       169 ~~~--~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~-~~~~~~-~~~~~--------~  236 (296)
T cd06618         169 KAK--TRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNCKTE-FEVLTK-ILQEE--------P  236 (296)
T ss_pred             Ccc--cCCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCCcchhH-HHHHHH-HhcCC--------C
Confidence            221  2235788999999987553    788999999999999999999999653221 111111 11111        0


Q ss_pred             hcCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Q 005257          598 RAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVL  636 (705)
Q Consensus       598 ~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L  636 (705)
                      .. ..........+.+++.+||+.||++||++.+++++-
T Consensus       237 ~~-~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~~  274 (296)
T cd06618         237 PS-LPPNEGFSPDFCSFVDLCLTKDHRKRPKYRELLQHP  274 (296)
T ss_pred             CC-CCCCCCCCHHHHHHHHHHccCChhhCCCHHHHhcCh
Confidence            00 001112345688999999999999999999998763

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it

>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

Probab=100.00  E-value=1e-33  Score=297.67  Aligned_cols=255  Identities=23%  Similarity=0.313  Sum_probs=200.7

Q ss_pred             CCCcceEEeecCceEEEEEEEc---CCCeEEEEEEeccCC----chhHHHHHHHHHHhccC-CCCCcceeeeeeeeccCc
Q 005257          365 GFSEENVIGVGGNGKVYKGVLE---GGGAEIAVKRISHEN----DGGTRAFLAEISSLGRL-KHKSLVGLRGWCKREKGS  436 (705)
Q Consensus       365 ~f~~~~~LG~G~fg~Vy~~~~~---~~~~~vavK~i~~~~----~~~~~~~~~Ei~~l~~l-~Hpniv~l~g~~~~~~~~  436 (705)
                      +|+..+.||+|++|.||++...   .+++.||||.++...    ....+.+.+|++++.++ +||||+++++.+.. +..
T Consensus         1 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~-~~~   79 (288)
T cd05583           1 NFELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQT-DTK   79 (288)
T ss_pred             CceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeec-CCE
Confidence            3677889999999999999864   356889999986432    22345688999999999 59999999987765 667


Q ss_pred             eEEEEeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccce
Q 005257          437 LMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLAR  516 (705)
Q Consensus       437 ~~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~  516 (705)
                      .++||||+++|+|.+++....   .+++..+..++.|+++||.|||+   .+++||||||+||+++.++.++|+|||+++
T Consensus        80 ~~lv~e~~~~~~L~~~~~~~~---~~~~~~~~~~~~ql~~~l~~lH~---~~~~H~dl~p~nil~~~~~~~~l~dfg~~~  153 (288)
T cd05583          80 LHLILDYVNGGELFTHLYQRE---HFTESEVRVYIAEIVLALDHLHQ---LGIIYRDIKLENILLDSEGHVVLTDFGLSK  153 (288)
T ss_pred             EEEEEecCCCCcHHHHHhhcC---CcCHHHHHHHHHHHHHHHHHHHH---CCeeccCCCHHHeEECCCCCEEEEECcccc
Confidence            899999999999999986532   68999999999999999999998   999999999999999999999999999998


Q ss_pred             ecCCCCcceeeeeeccccCCCccccccCC--CCccccEEEEehhHHHHhhCCCCCCCCCcc-HHHHHHHHHHhCchhHHH
Q 005257          517 MHGHGQVASTTRVVGTVGYLAPEVFSSGR--ASTQTDVFGFGILILEVLSGRRPIEEGKPN-LVEMVWELMVQGKLLDAL  593 (705)
Q Consensus       517 ~~~~~~~~~~~~~~gt~~y~APE~~~~~~--~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~-~~~~v~~~~~~~~~~~~i  593 (705)
                      ..............|+..|+|||.+.+..  .+.++||||||+++|||++|..||...... ........+..       
T Consensus       154 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~-------  226 (288)
T cd05583         154 EFLAEEEERAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTVDGEQNSQSEISRRILK-------  226 (288)
T ss_pred             ccccccccccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCcccCcccchHHHHHHHHHc-------
Confidence            65544332233356889999999987654  788999999999999999999999643221 11111111110       


Q ss_pred             HHhhhcCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHh
Q 005257          594 DARLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLEG  638 (705)
Q Consensus       594 d~~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  638 (705)
                           .....+......+.+++.+||+.||++|||+.++.+.|+.
T Consensus       227 -----~~~~~~~~~~~~l~~li~~~l~~~p~~R~t~~~~~~~l~~  266 (288)
T cd05583         227 -----SKPPFPKTMSAEARDFIQKLLEKDPKKRLGANGADEIKNH  266 (288)
T ss_pred             -----cCCCCCcccCHHHHHHHHHHhcCCHhhccCcchHHHHhcC
Confidence                 0011222334567889999999999999999999888774

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines

>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases

Probab=100.00  E-value=1.2e-33  Score=295.66  Aligned_cols=260  Identities=28%  Similarity=0.371  Sum_probs=201.5

Q ss_pred             CCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCCc--hhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEEEEee
Q 005257          366 FSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHEND--GGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDY  443 (705)
Q Consensus       366 f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~--~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~lV~E~  443 (705)
                      |...+.||+|++|.||+|....+++.+++|++.....  .....+.+|++++++++|+||+++++++.. +...++|+||
T Consensus         1 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~~~v~e~   79 (283)
T cd05118           1 YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLLDVFRH-KGDLYLVFEF   79 (283)
T ss_pred             CccceeeecCCCceEEEEEcCCCCcEEEEEEeccccccchhHHHHHHHHHHHHHhcCCCcchHHHhhcc-CCCEEEEEec
Confidence            4567889999999999999988899999999876533  345678899999999999999999998876 6789999999


Q ss_pred             CCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecCCCCc
Q 005257          444 MENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQV  523 (705)
Q Consensus       444 ~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~~~~~  523 (705)
                      +++ +|..++....  ..+++.++..++.|++.||.|||+   .+++|+||||+||+++.++.+||+|||.+....... 
T Consensus        80 ~~~-~l~~~l~~~~--~~~~~~~~~~~~~~i~~~l~~LH~---~~i~H~dl~p~nili~~~~~~~l~df~~~~~~~~~~-  152 (283)
T cd05118          80 MDT-DLYKLIKDRQ--RGLPESLIKSYLYQLLQGLAFCHS---HGILHRDLKPENLLINTEGVLKLADFGLARSFGSPV-  152 (283)
T ss_pred             cCC-CHHHHHHhhc--ccCCHHHHHHHHHHHHHHHHHHHH---CCeeecCcCHHHEEECCCCcEEEeeeeeeEecCCCc-
Confidence            975 8888886543  268999999999999999999998   999999999999999999999999999998775543 


Q ss_pred             ceeeeeeccccCCCccccccC-CCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHh-CchhHHH----HH--
Q 005257          524 ASTTRVVGTVGYLAPEVFSSG-RASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQ-GKLLDAL----DA--  595 (705)
Q Consensus       524 ~~~~~~~gt~~y~APE~~~~~-~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~-~~~~~~i----d~--  595 (705)
                      .......++..|+|||.+.+. .++.++||||||+++|||++|+.||.....  .+........ +......    ..  
T Consensus       153 ~~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (283)
T cd05118         153 RPYTHYVVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKSE--IDQLFKIFRTLGTPDPEVWPKFTSLA  230 (283)
T ss_pred             ccccCccCcccccCcHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCH--HHHHHHHHHHcCCCchHhcccchhhh
Confidence            122234678899999998776 789999999999999999999999975432  1111111110 0000000    00  


Q ss_pred             -----hhhcCC-----CCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 005257          596 -----RLRAKG-----GFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKV  635 (705)
Q Consensus       596 -----~l~~~~-----~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  635 (705)
                           ......     .........+.+++..||++||.+||++.+++..
T Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~ll~~  280 (283)
T cd05118         231 RNYKFSFPKKAGMPLPKLFPNASPQALDLLSQMLHYDPHKRITAEQALAH  280 (283)
T ss_pred             hhhhhhhccccccCHHHhhhhhCHHHHHHHHHHhccCcccCcCHHHHhhC
Confidence                 000000     0112235678999999999999999999999863

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They

>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

Probab=100.00  E-value=8.6e-34  Score=305.54  Aligned_cols=262  Identities=26%  Similarity=0.356  Sum_probs=199.7

Q ss_pred             hCCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccC--CchhHHHHHHHHHHhccC-CCCCcceeeeeeeec-cCceE
Q 005257          363 TKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHE--NDGGTRAFLAEISSLGRL-KHKSLVGLRGWCKRE-KGSLM  438 (705)
Q Consensus       363 t~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~--~~~~~~~~~~Ei~~l~~l-~Hpniv~l~g~~~~~-~~~~~  438 (705)
                      .++|...+.||+|+||.||+|.+..+++.+|+|++...  .......+.+|+.++.++ +||||++++++|... ....+
T Consensus         6 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~~~~~~   85 (337)
T cd07852           6 LRKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFREIMFLQELGDHPNIVKLLNVIKAENDKDIY   85 (337)
T ss_pred             hhHHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCcchhhhhhhHHHHHHHHhcCCCCccceeeeeccCCCceEE
Confidence            45788889999999999999999888999999988543  233455678899999999 999999999988643 33689


Q ss_pred             EEEeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceec
Q 005257          439 LVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMH  518 (705)
Q Consensus       439 lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~  518 (705)
                      +||||++ ++|..++...    .+++..+..++.|++.||.|||+   .+|+||||||+||+++.++.+||+|||++...
T Consensus        86 lv~e~~~-~~L~~~~~~~----~~~~~~~~~i~~qi~~~L~~LH~---~~i~H~dl~p~nill~~~~~~kl~d~g~~~~~  157 (337)
T cd07852          86 LVFEYME-TDLHAVIRAN----ILEDVHKRYIMYQLLKALKYIHS---GNVIHRDLKPSNILLNSDCRVKLADFGLARSL  157 (337)
T ss_pred             EEecccc-cCHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEEcCCCcEEEeeccchhcc
Confidence            9999997 5998888542    58899999999999999999998   99999999999999999999999999999865


Q ss_pred             CCCCc----ceeeeeeccccCCCcccccc-CCCCccccEEEEehhHHHHhhCCCCCCCCCcc-HHHHHHHHHHhCchh--
Q 005257          519 GHGQV----ASTTRVVGTVGYLAPEVFSS-GRASTQTDVFGFGILILEVLSGRRPIEEGKPN-LVEMVWELMVQGKLL--  590 (705)
Q Consensus       519 ~~~~~----~~~~~~~gt~~y~APE~~~~-~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~-~~~~v~~~~~~~~~~--  590 (705)
                      .....    .......|+..|+|||.+.+ ..++.++|||||||++|||++|+.||...... ....+...  .+...  
T Consensus       158 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el~tg~~pf~~~~~~~~~~~~~~~--~~~~~~~  235 (337)
T cd07852         158 SELEENPENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGTSTLNQLEKIIEV--IGPPSAE  235 (337)
T ss_pred             ccccccccCcchhcccccccccCceeeeccccccccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHH--hCCCCHH
Confidence            43322    12334578999999998755 45789999999999999999999999754321 11111010  01000  


Q ss_pred             -----------HHHHHhhhcCC-----CCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 005257          591 -----------DALDARLRAKG-----GFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKV  635 (705)
Q Consensus       591 -----------~~id~~l~~~~-----~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  635 (705)
                                 ..++ ......     .........+.+++.+||+.||++|||+.++++.
T Consensus       236 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rps~~~il~~  295 (337)
T cd07852         236 DIESIKSPFAATMLD-SLPSRPRKPLDELLPKASDDALDLLKKLLVFNPNKRLTAEEALEH  295 (337)
T ss_pred             HHHHHHhhhHHHhhh-hcccccccchhhhccCCCHHHHHHHHHhccCCcccccCHHHHhhC
Confidence                       0000 000000     0001124568899999999999999999999874

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul

>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional

Probab=100.00  E-value=2.1e-33  Score=292.49  Aligned_cols=247  Identities=21%  Similarity=0.265  Sum_probs=190.7

Q ss_pred             HHHhCCCCcceEE--eecCceEEEEEEEcCCCeEEEEEEeccCCchhHHHHHHHHHHhccC-CCCCcceeeeeeeeccCc
Q 005257          360 EAATKGFSEENVI--GVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRL-KHKSLVGLRGWCKREKGS  436 (705)
Q Consensus       360 ~~at~~f~~~~~L--G~G~fg~Vy~~~~~~~~~~vavK~i~~~~~~~~~~~~~Ei~~l~~l-~Hpniv~l~g~~~~~~~~  436 (705)
                      ....++|...+.+  |+|+||.||++..+.++..+|+|.+........     |+.....+ +|||++++++.+.. .+.
T Consensus        10 ~~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~-----e~~~~~~~~~h~~iv~~~~~~~~-~~~   83 (267)
T PHA03390         10 VQFLKNCEIVKKLKLIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFNAI-----EPMVHQLMKDNPNFIKLYYSVTT-LKG   83 (267)
T ss_pred             HHHHHhhccccceeecCCCceEEEEEEEcCCCcEEEEEEEehhhcchh-----hHHHHHHhhcCCCEEEEEEEEec-CCe
Confidence            3334556666655  999999999999999999999999865422211     22222212 69999999998876 568


Q ss_pred             eEEEEeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCC-Ceeeeeeccc
Q 005257          437 LMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEM-NGRLGDFGLA  515 (705)
Q Consensus       437 ~~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~-~~kL~DFGla  515 (705)
                      .++||||+++++|.+++....   .+++.++..++.|+++||.|||+   .+++||||||+||+++.++ .++|+|||++
T Consensus        84 ~~iv~e~~~~~~L~~~l~~~~---~l~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~nil~~~~~~~~~l~dfg~~  157 (267)
T PHA03390         84 HVLIMDYIKDGDLFDLLKKEG---KLSEAEVKKIIRQLVEALNDLHK---HNIIHNDIKLENVLYDRAKDRIYLCDYGLC  157 (267)
T ss_pred             eEEEEEcCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHh---CCeeeCCCCHHHEEEeCCCCeEEEecCccc
Confidence            999999999999999997543   68999999999999999999998   8999999999999999988 9999999998


Q ss_pred             eecCCCCcceeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhHHHHH
Q 005257          516 RMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDA  595 (705)
Q Consensus       516 ~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~  595 (705)
                      +......     ...|+..|+|||++.+..++.++|||||||++|||++|+.||..........  ..+.         .
T Consensus       158 ~~~~~~~-----~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~--~~~~---------~  221 (267)
T PHA03390        158 KIIGTPS-----CYDGTLDYFSPEKIKGHNYDVSFDWWAVGVLTYELLTGKHPFKEDEDEELDL--ESLL---------K  221 (267)
T ss_pred             eecCCCc-----cCCCCCcccChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCcchhhH--HHHH---------H
Confidence            7654322     2357899999999998889999999999999999999999997543221110  0000         0


Q ss_pred             hhhcCCCCCHHHHHHHHHHHHHcCCCCCCCCCC-HHHHHH
Q 005257          596 RLRAKGGFDEDEVERVLHLGLLCAYPDPRARPT-MRQVVK  634 (705)
Q Consensus       596 ~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs-~~evl~  634 (705)
                      ...............+.+++..||+++|.+||+ ++++++
T Consensus       222 ~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~l~  261 (267)
T PHA03390        222 RQQKKLPFIKNVSKNANDFVQSMLKYNINYRLTNYNEIIK  261 (267)
T ss_pred             hhcccCCcccccCHHHHHHHHHHhccChhhCCchHHHHhc
Confidence            001001122234567889999999999999996 688875

>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

Probab=100.00  E-value=3.9e-33  Score=292.29  Aligned_cols=261  Identities=25%  Similarity=0.362  Sum_probs=196.7

Q ss_pred             CCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCCc--hhHHHHHHHHHHhccC---CCCCcceeeeeeeeccC----c
Q 005257          366 FSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHEND--GGTRAFLAEISSLGRL---KHKSLVGLRGWCKREKG----S  436 (705)
Q Consensus       366 f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~--~~~~~~~~Ei~~l~~l---~Hpniv~l~g~~~~~~~----~  436 (705)
                      |+..+.||+|+||.||+|.++.++..+|+|++.....  .....+.+|+.++.++   +|||++++++.+...+.    .
T Consensus         1 y~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~   80 (287)
T cd07838           1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDRELK   80 (287)
T ss_pred             CeEEEEecccCceEEEEEEECCCCCEEEEEEeccccccchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCce
Confidence            5677899999999999999988899999999975422  2234566787776665   69999999999876332    3


Q ss_pred             eEEEEeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccce
Q 005257          437 LMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLAR  516 (705)
Q Consensus       437 ~~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~  516 (705)
                      .+++|||+.+ +|.+++...... .+++.++..++.|++.||.|||+   .+++|+||+|+||+++.++.+||+|||++.
T Consensus        81 ~~l~~e~~~~-~l~~~l~~~~~~-~l~~~~~~~~~~~i~~al~~LH~---~~i~h~~l~~~nili~~~~~~~l~dfg~~~  155 (287)
T cd07838          81 LTLVFEHVDQ-DLATYLSKCPKP-GLPPETIKDLMRQLLRGVDFLHS---HRIVHRDLKPQNILVTSDGQVKIADFGLAR  155 (287)
T ss_pred             eEEEehhccc-CHHHHHHHccCC-CCCHHHHHHHHHHHHHHHHHHHH---CCeeeccCChhhEEEccCCCEEEeccCcce
Confidence            8999999974 899988764432 58999999999999999999998   999999999999999999999999999998


Q ss_pred             ecCCCCcceeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhH-----
Q 005257          517 MHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLD-----  591 (705)
Q Consensus       517 ~~~~~~~~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~-----  591 (705)
                      ........  ....++..|+|||++.+..++.++|||||||++|||++|+.||......  +........-....     
T Consensus       156 ~~~~~~~~--~~~~~~~~~~~PE~~~~~~~~~~~Di~s~G~~l~~l~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~  231 (287)
T cd07838         156 IYSFEMAL--TSVVVTLWYRAPEVLLQSSYATPVDMWSVGCIFAELFRRRPLFRGTSEA--DQLDKIFDVIGLPSEEEWP  231 (287)
T ss_pred             eccCCccc--ccccccccccChHHhccCCCCCcchhhhHHHHHHHHHhCCCcccCCChH--HHHHHHHHHcCCCChHhcC
Confidence            76543221  2235788999999999888999999999999999999999998754321  11111111100000     


Q ss_pred             --------HHHHhhh-cCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 005257          592 --------ALDARLR-AKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKV  635 (705)
Q Consensus       592 --------~id~~l~-~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  635 (705)
                              ....... .......+....+.+++..||+.||++||++.+++++
T Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~il~~  284 (287)
T cd07838         232 RNVSLPRSSFPSYTPRSFKSFVPEICEEGLDLLKKMLTFNPHKRISAFEALQH  284 (287)
T ss_pred             CCcccchhhcccccccchhhhhhhhhHHHHHHHHHHhccCCccCCCHHHHhcC
Confidence                    0000000 0000111234667899999999999999999998853

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both

>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

Probab=100.00  E-value=1.2e-33  Score=305.13  Aligned_cols=264  Identities=20%  Similarity=0.321  Sum_probs=198.3

Q ss_pred             hCCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCC--chhHHHHHHHHHHhccCCCCCcceeeeeeeecc-----C
Q 005257          363 TKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHEN--DGGTRAFLAEISSLGRLKHKSLVGLRGWCKREK-----G  435 (705)
Q Consensus       363 t~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~--~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~-----~  435 (705)
                      .++|...+.||+|+||.||+|....+++.||||++....  ......+.+|+.+++.++||||+++++++....     .
T Consensus        14 ~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~   93 (342)
T cd07879          14 PERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHENVIGLLDVFTSAVSGDEFQ   93 (342)
T ss_pred             ccceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccccccchhHHHHHHHHHHhcCCCCccchhheecccccCCCCc
Confidence            368889999999999999999998889999999986542  223456889999999999999999999876422     2


Q ss_pred             ceEEEEeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccc
Q 005257          436 SLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLA  515 (705)
Q Consensus       436 ~~~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla  515 (705)
                      ..++|+||+.. +|..++.     ..+++..+..++.|++.||.|||+   .+++||||||+||+++.++.+||+|||++
T Consensus        94 ~~~lv~e~~~~-~l~~~~~-----~~~~~~~~~~~~~qi~~aL~~LH~---~~i~H~dlkp~NIll~~~~~~kL~dfg~~  164 (342)
T cd07879          94 DFYLVMPYMQT-DLQKIMG-----HPLSEDKVQYLVYQMLCGLKYIHS---AGIIHRDLKPGNLAVNEDCELKILDFGLA  164 (342)
T ss_pred             eEEEEeccccc-CHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEECCCCCEEEeeCCCC
Confidence            46899999964 7766541     258999999999999999999998   99999999999999999999999999999


Q ss_pred             eecCCCCcceeeeeeccccCCCcccccc-CCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHh-C-chhHH
Q 005257          516 RMHGHGQVASTTRVVGTVGYLAPEVFSS-GRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQ-G-KLLDA  592 (705)
Q Consensus       516 ~~~~~~~~~~~~~~~gt~~y~APE~~~~-~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~-~-~~~~~  592 (705)
                      +......    ....++..|+|||.+.+ ..++.++|||||||++|||++|+.||.....  ...+...+.. + .....
T Consensus       165 ~~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el~~g~~pf~~~~~--~~~~~~~~~~~~~~~~~~  238 (342)
T cd07879         165 RHADAEM----TGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDY--LDQLTQILKVTGVPGPEF  238 (342)
T ss_pred             cCCCCCC----CCceeeecccChhhhcCccccCchHHHHHHHHHHHHHHhCCCCCCCCCH--HHHHHHHHHhcCCCCHHH
Confidence            7653321    23467889999999876 4688999999999999999999999976432  1111111110 0 00000


Q ss_pred             ---HHH-----hhhcCCCCC--------HHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH--HHhccc
Q 005257          593 ---LDA-----RLRAKGGFD--------EDEVERVLHLGLLCAYPDPRARPTMRQVVKV--LEGKIE  641 (705)
Q Consensus       593 ---id~-----~l~~~~~~~--------~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~--L~~~~~  641 (705)
                         ++.     ........+        +.....+.+++..||+.||++||++.+++.+  +++..+
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~~~~e~l~h~~f~~~~~  305 (342)
T cd07879         239 VQKLEDKAAKSYIKSLPKYPRKDFSTLFPKASPQAVDLLEKMLELDVDKRLTATEALEHPYFDSFRD  305 (342)
T ss_pred             HHHhcccchHHHHhhcCCcccchHHHHhcCCCHHHHHHHHHHcCCChhhCcCHHHHhcCcchhhccc
Confidence               000     000000000        0123457899999999999999999999954  655433

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13

>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1

Probab=100.00  E-value=1.5e-33  Score=296.67  Aligned_cols=251  Identities=23%  Similarity=0.325  Sum_probs=196.7

Q ss_pred             CCCcceEEeecCceEEEEEEEc---CCCeEEEEEEeccCC----chhHHHHHHHHHHhccC-CCCCcceeeeeeeeccCc
Q 005257          365 GFSEENVIGVGGNGKVYKGVLE---GGGAEIAVKRISHEN----DGGTRAFLAEISSLGRL-KHKSLVGLRGWCKREKGS  436 (705)
Q Consensus       365 ~f~~~~~LG~G~fg~Vy~~~~~---~~~~~vavK~i~~~~----~~~~~~~~~Ei~~l~~l-~Hpniv~l~g~~~~~~~~  436 (705)
                      +|+..+.||+|+||.||++...   .+|..||+|++....    ....+.+.+|++++.++ +|+||+++++.+.. +..
T Consensus         1 ~y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~-~~~   79 (290)
T cd05613           1 NFELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQT-DTK   79 (290)
T ss_pred             CceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeec-CCe
Confidence            4677899999999999999874   367899999986532    22346688899999999 59999999987765 668


Q ss_pred             eEEEEeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccce
Q 005257          437 LMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLAR  516 (705)
Q Consensus       437 ~~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~  516 (705)
                      .++||||+++++|.+++....   .+++..+..++.|++.||.|||+   .+++||||||+|||++.++.+||+|||+++
T Consensus        80 ~~lv~e~~~~~~L~~~l~~~~---~l~~~~~~~~~~qi~~al~~lH~---~~i~H~dl~p~nil~~~~~~~kl~dfg~~~  153 (290)
T cd05613          80 LHLILDYINGGELFTHLSQRE---RFKEQEVQIYSGEIVLALEHLHK---LGIIYRDIKLENILLDSNGHVVLTDFGLSK  153 (290)
T ss_pred             EEEEEecCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHh---CCeeccCCCHHHeEECCCCCEEEeeCccce
Confidence            899999999999999997543   58899999999999999999998   999999999999999999999999999998


Q ss_pred             ecCCCCcceeeeeeccccCCCccccccC--CCCccccEEEEehhHHHHhhCCCCCCCCCcc-HHHHHHHHHHhCchhHHH
Q 005257          517 MHGHGQVASTTRVVGTVGYLAPEVFSSG--RASTQTDVFGFGILILEVLSGRRPIEEGKPN-LVEMVWELMVQGKLLDAL  593 (705)
Q Consensus       517 ~~~~~~~~~~~~~~gt~~y~APE~~~~~--~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~-~~~~v~~~~~~~~~~~~i  593 (705)
                      ..............|+..|+|||.+...  .++.++||||||+++|||++|+.||...... ........          
T Consensus       154 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~----------  223 (290)
T cd05613         154 EFHEDEVERAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDGEKNSQAEISRR----------  223 (290)
T ss_pred             ecccccccccccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCCcCCccccHHHHHHH----------
Confidence            7654433333345689999999998753  4678999999999999999999999643211 11111111          


Q ss_pred             HHhhhcCCCCCHHHHHHHHHHHHHcCCCCCCCCC-----CHHHHHH
Q 005257          594 DARLRAKGGFDEDEVERVLHLGLLCAYPDPRARP-----TMRQVVK  634 (705)
Q Consensus       594 d~~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP-----s~~evl~  634 (705)
                        .......++......+.+++..||+.||++||     ++.+++.
T Consensus       224 --~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~~~~~~~~~~l~~  267 (290)
T cd05613         224 --ILKSEPPYPQEMSALAKDIIQRLLMKDPKKRLGCGPSDADEIKK  267 (290)
T ss_pred             --hhccCCCCCccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHc
Confidence              11111222333446788999999999999997     5566554

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

Probab=100.00  E-value=1.5e-33  Score=299.23  Aligned_cols=266  Identities=26%  Similarity=0.320  Sum_probs=196.9

Q ss_pred             hCCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCCc--hhHHHHHHHHHHhccCCCCCcceeeeeeeecc------
Q 005257          363 TKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHEND--GGTRAFLAEISSLGRLKHKSLVGLRGWCKREK------  434 (705)
Q Consensus       363 t~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~--~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~------  434 (705)
                      .++|+..+.||+|+||.||+|....+++.+|||++.....  .....+.+|++++++++||||+++++++....      
T Consensus         7 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~   86 (311)
T cd07866           7 LRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKLKHPNVVPLIDMAVERPDKSKRK   86 (311)
T ss_pred             cccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCCCcchhHHHHHHHHHhcCCCCccchhhheeccccccccc
Confidence            4689999999999999999999998899999999865432  22346788999999999999999999775432      


Q ss_pred             -CceEEEEeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeec
Q 005257          435 -GSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFG  513 (705)
Q Consensus       435 -~~~~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFG  513 (705)
                       ..+++|+||+.+ +|...+....  ..+++.++..++.|+++||.|||+   .+++|+||||+||++++++.+||+|||
T Consensus        87 ~~~~~lv~~~~~~-~l~~~~~~~~--~~~~~~~~~~i~~~l~~al~~lH~---~~i~H~dl~p~nil~~~~~~~~l~dfg  160 (311)
T cd07866          87 RGSVYMVTPYMDH-DLSGLLENPS--VKLTESQIKCYMLQLLEGINYLHE---NHILHRDIKAANILIDNQGILKIADFG  160 (311)
T ss_pred             CceEEEEEecCCc-CHHHHHhccc--cCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEECCCCCEEECcCc
Confidence             247999999965 6777765432  269999999999999999999998   999999999999999999999999999


Q ss_pred             cceecCCCCcc----------eeeeeeccccCCCccccccC-CCCccccEEEEehhHHHHhhCCCCCCCCCcc-HHHHHH
Q 005257          514 LARMHGHGQVA----------STTRVVGTVGYLAPEVFSSG-RASTQTDVFGFGILILEVLSGRRPIEEGKPN-LVEMVW  581 (705)
Q Consensus       514 la~~~~~~~~~----------~~~~~~gt~~y~APE~~~~~-~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~-~~~~v~  581 (705)
                      +++........          ..+...|++.|+|||.+.+. .++.++|||||||++|||++|+.||...... ....++
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~~g~~~~~~~~~~~~~~~~~  240 (311)
T cd07866         161 LARPYDGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPILQGKSDIDQLHLIF  240 (311)
T ss_pred             cchhccCCCcccccCCcccccccccceeccCcCChHHhhCCCccCchhHhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Confidence            99765432211          11234678899999987653 5789999999999999999999999754321 111111


Q ss_pred             HHHHhCch---------hHHHHHhhhcCCCCC-----HHHHHHHHHHHHHcCCCCCCCCCCHHHHHH
Q 005257          582 ELMVQGKL---------LDALDARLRAKGGFD-----EDEVERVLHLGLLCAYPDPRARPTMRQVVK  634 (705)
Q Consensus       582 ~~~~~~~~---------~~~id~~l~~~~~~~-----~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~  634 (705)
                      ........         ....+..........     ....+.+.+++.+|++.||++|||+.+++.
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~ell~  307 (311)
T cd07866         241 KLCGTPTEETWPGWRSLPGCEGVHSFTNYPRTLEERFGKLGPEGLDLLSKLLSLDPYKRLTASDALE  307 (311)
T ss_pred             HHhCCCChhhchhhhhcccccccccCCCCCccHHHHcccCChhHHHHHHHHcccCcccCcCHHHHhc
Confidence            11110000         000000000000000     011256789999999999999999998875

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic

>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

Probab=100.00  E-value=1.7e-33  Score=302.04  Aligned_cols=261  Identities=26%  Similarity=0.327  Sum_probs=203.5

Q ss_pred             CCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCC--chhHHHHHHHHHHhccCCCCCcceeeeeeeecc----CceE
Q 005257          365 GFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHEN--DGGTRAFLAEISSLGRLKHKSLVGLRGWCKREK----GSLM  438 (705)
Q Consensus       365 ~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~--~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~----~~~~  438 (705)
                      +|...+.||+|++|.||+|+...+++.||||++....  ....+.+.+|+.+++.++||||+++.+++....    ..++
T Consensus         1 ~y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~   80 (330)
T cd07834           1 RYELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPEDFNDVY   80 (330)
T ss_pred             CceeeeeecCCCCeEEEEEEeCCCCcEEEEEeeccccccchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCcccccceE
Confidence            4778899999999999999998889999999987653  345577899999999999999999999887643    3789


Q ss_pred             EEEeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceec
Q 005257          439 LVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMH  518 (705)
Q Consensus       439 lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~  518 (705)
                      +||||++ ++|.+++....   .+++..+..++.|++.||.|||+   .+++||||||+|||++.++.++|+|||++...
T Consensus        81 lv~e~~~-~~l~~~l~~~~---~l~~~~~~~i~~~l~~~l~~LH~---~gi~H~dlkp~nili~~~~~~~L~dfg~~~~~  153 (330)
T cd07834          81 IVTELME-TDLHKVIKSPQ---PLTDDHIQYFLYQILRGLKYLHS---ANVIHRDLKPSNILVNSNCDLKICDFGLARGV  153 (330)
T ss_pred             EEecchh-hhHHHHHhCCC---CCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEcCCCCEEEcccCceEee
Confidence            9999997 48888886433   69999999999999999999998   99999999999999999999999999999876


Q ss_pred             CCCCc--ceeeeeeccccCCCccccccC-CCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHh-Cc------
Q 005257          519 GHGQV--ASTTRVVGTVGYLAPEVFSSG-RASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQ-GK------  588 (705)
Q Consensus       519 ~~~~~--~~~~~~~gt~~y~APE~~~~~-~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~-~~------  588 (705)
                      .....  .......++..|+|||.+.+. .++.++||||||+++|||++|+.||......  +.....+.. +.      
T Consensus       154 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~~pf~~~~~~--~~~~~i~~~~~~~~~~~~  231 (330)
T cd07834         154 DPDEDEKGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRDYI--DQLNLIVEVLGTPSEEDL  231 (330)
T ss_pred             cccccccccccccccccCcCCceeeecccCCCcchhHHHHHHHHHHHHcCCCCcCCCCHH--HHHHHHHHhcCCCChhHh
Confidence            55431  122334678999999999887 7899999999999999999999999764421  111111110 00      


Q ss_pred             -------hhHHHHHhhhcCCC-----CCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 005257          589 -------LLDALDARLRAKGG-----FDEDEVERVLHLGLLCAYPDPRARPTMRQVVKV  635 (705)
Q Consensus       589 -------~~~~id~~l~~~~~-----~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  635 (705)
                             ....+.. ......     ........+.+++..||+.+|++||++.+++++
T Consensus       232 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~  289 (330)
T cd07834         232 KFITSEKARNYLKS-LPKKPKKPLSKLFPGASPEAIDLLEKMLVFDPKKRITADEALAH  289 (330)
T ss_pred             hhccccchhhHHhh-cccCCcchhHHhcccCCHHHHHHHHHHccCChhhCCCHHHHHhC
Confidence                   0000000 000000     011134568899999999999999999999984

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and

>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]

Probab=100.00  E-value=2.7e-34  Score=292.69  Aligned_cols=266  Identities=21%  Similarity=0.326  Sum_probs=217.6

Q ss_pred             HHHHHHHhCCCCcceEEeecCceEEEEEEEcCCC-----eEEEEEEeccC-CchhHHHHHHHHHHhccCCCCCcceeeee
Q 005257          356 YQEIEAATKGFSEENVIGVGGNGKVYKGVLEGGG-----AEIAVKRISHE-NDGGTRAFLAEISSLGRLKHKSLVGLRGW  429 (705)
Q Consensus       356 ~~el~~at~~f~~~~~LG~G~fg~Vy~~~~~~~~-----~~vavK~i~~~-~~~~~~~~~~Ei~~l~~l~Hpniv~l~g~  429 (705)
                      .+++.....+++...++-+|.||.||.|.+++..     +.|-+|.++.. +.-+...++.|-..+..+.|||++++.++
T Consensus       276 ~~~l~v~r~Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~AS~iQv~~~L~es~lly~~sH~nll~V~~V  355 (563)
T KOG1024|consen  276 LQELTVQRCRVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHASQIQVNLLLQESMLLYGASHPNLLSVLGV  355 (563)
T ss_pred             HHhhhhhhhheechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhcccHHHHHHHHHHHHHHhcCcCCCccceeEE
Confidence            4566667778888899999999999999886432     45677777544 34456678999999999999999999999


Q ss_pred             eeeccCceEEEEeeCCCCChhHHHHhcC-----CCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccC
Q 005257          430 CKREKGSLMLVYDYMENGSLDKWIFQCD-----GSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKE  504 (705)
Q Consensus       430 ~~~~~~~~~lV~E~~~~gsL~~~L~~~~-----~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~  504 (705)
                      |.++....+.+|.++.-|+|..+|..++     ..+.++..+...++.|++.|++|||+   ++|||.||.++|++||+.
T Consensus       356 ~ie~~~~P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~---~~ViHkDiAaRNCvIdd~  432 (563)
T KOG1024|consen  356 SIEDYATPFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHN---HGVIHKDIAARNCVIDDQ  432 (563)
T ss_pred             EeeccCcceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHh---cCcccchhhhhcceehhh
Confidence            9987788899999999999999998543     23468889999999999999999998   999999999999999999


Q ss_pred             CCeeeeeeccceecCCCCcceee-eeeccccCCCccccccCCCCccccEEEEehhHHHHhh-CCCCCCCCCccHHHHHHH
Q 005257          505 MNGRLGDFGLARMHGHGQVASTT-RVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLS-GRRPIEEGKPNLVEMVWE  582 (705)
Q Consensus       505 ~~~kL~DFGla~~~~~~~~~~~~-~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~Ellt-G~~Pf~~~~~~~~~~v~~  582 (705)
                      ..+||+|=.++|..-+.+..-.. .--.+..||+||.+.+..|+.++|||||||++|||+| |+.|+.+-++.   .+..
T Consensus       433 LqVkltDsaLSRDLFP~DYhcLGDnEnRPvkWMslEal~n~~yssasDvWsfGVllWELmtlg~~PyaeIDPf---Em~~  509 (563)
T KOG1024|consen  433 LQVKLTDSALSRDLFPGDYHCLGDNENRPVKWMSLEALQNSHYSSASDVWSFGVLLWELMTLGKLPYAEIDPF---EMEH  509 (563)
T ss_pred             eeEEeccchhccccCcccccccCCCCCCcccccCHHHHhhhhhcchhhhHHHHHHHHHHHhcCCCCccccCHH---HHHH
Confidence            99999999999866554332211 1123568999999999999999999999999999999 99999876653   2223


Q ss_pred             HHHhCchhHHHHHhhhcCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHh
Q 005257          583 LMVQGKLLDALDARLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLEG  638 (705)
Q Consensus       583 ~~~~~~~~~~id~~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  638 (705)
                      .+.+|..+           ..+.+++.++..++.-||..+|++||+++|++.-|.+
T Consensus       510 ylkdGyRl-----------aQP~NCPDeLf~vMacCWallpeeRPsf~Qlv~cLse  554 (563)
T KOG1024|consen  510 YLKDGYRL-----------AQPFNCPDELFTVMACCWALLPEERPSFSQLVICLSE  554 (563)
T ss_pred             HHhcccee-----------cCCCCCcHHHHHHHHHHHhcCcccCCCHHHHHHHHHH
Confidence            33444322           1245677889999999999999999999999998874

>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]

Probab=100.00  E-value=6.6e-34  Score=306.82  Aligned_cols=249  Identities=23%  Similarity=0.363  Sum_probs=206.2

Q ss_pred             hCCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCC--chhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEEE
Q 005257          363 TKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHEN--DGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLV  440 (705)
Q Consensus       363 t~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~--~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~lV  440 (705)
                      ...|.+...||+|.|++|.+|++..++..||||.+.+..  ....+.+.+|+++|..|+|||||+++.+... ...+|+|
T Consensus        55 vg~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l~HPnIvkl~~v~~t-~~~lylV  133 (596)
T KOG0586|consen   55 VGLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSLNHPNIVKLFSVIET-EATLYLV  133 (596)
T ss_pred             ccceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccChHHHHHHHHHHHHHHhcCCcceeeeeeeeee-cceeEEE
Confidence            456888999999999999999999999999999997653  3344668999999999999999999998876 6789999


Q ss_pred             EeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecCC
Q 005257          441 YDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGH  520 (705)
Q Consensus       441 ~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~~  520 (705)
                      |||+.+|.+.++|.+..   ...+.....++.|+..|++|||+   +.|+|||||++||||+.+.++||+|||++..+..
T Consensus       134 ~eya~~ge~~~yl~~~g---r~~e~~ar~~F~q~vsaveYcH~---k~ivHrdLk~eNilL~~~mnikIaDfgfS~~~~~  207 (596)
T KOG0586|consen  134 MEYASGGELFDYLVKHG---RMKEKEARAKFRQIVSAVEYCHS---KNIVHRDLKAENILLDENMNIKIADFGFSTFFDY  207 (596)
T ss_pred             EEeccCchhHHHHHhcc---cchhhhhhhhhHHHHHHHHHHhh---cceeccccchhhcccccccceeeeccccceeecc
Confidence            99999999999998765   46668899999999999999998   9999999999999999999999999999998875


Q ss_pred             CCcceeeeeeccccCCCccccccCCC-CccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhHHHHHhhhc
Q 005257          521 GQVASTTRVVGTVGYLAPEVFSSGRA-STQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRA  599 (705)
Q Consensus       521 ~~~~~~~~~~gt~~y~APE~~~~~~~-s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~l~~  599 (705)
                      +..  ....+|++.|.|||++.+.+| .+++|+||+|++||-|++|..||++..-.   ...+..            +..
T Consensus       208 ~~~--lqt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG~~lk---~Lr~rv------------l~g  270 (596)
T KOG0586|consen  208 GLM--LQTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDGQNLK---ELRPRV------------LRG  270 (596)
T ss_pred             ccc--ccccCCCCCccChHhhcCcccCCcceehhhhhhhheeeeecccccCCcccc---cccchh------------eee
Confidence            443  345799999999999988765 68999999999999999999999864321   001111            111


Q ss_pred             CCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 005257          600 KGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKV  635 (705)
Q Consensus       600 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  635 (705)
                      +..++.-.....-+++++.+-++|.+|++++++.+.
T Consensus       271 k~rIp~~ms~dce~lLrk~lvl~Pskr~~~dqim~~  306 (596)
T KOG0586|consen  271 KYRIPFYMSCDCEDLLRKFLVLNPSKRGPCDQIMKD  306 (596)
T ss_pred             eecccceeechhHHHHHHhhccCccccCCHHHhhhh
Confidence            111222223445677788888999999999999774

>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]

Probab=100.00  E-value=1.4e-34  Score=330.03  Aligned_cols=255  Identities=27%  Similarity=0.418  Sum_probs=196.5

Q ss_pred             HhCCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccC-CchhHHHHHHHHHHhccCCCCCcceeeeeeee--------
Q 005257          362 ATKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHE-NDGGTRAFLAEISSLGRLKHKSLVGLRGWCKR--------  432 (705)
Q Consensus       362 at~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~-~~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~--------  432 (705)
                      -..+|++.+.||+||||.|||++.+-+|+.+|||+|... .......+.+|++++++|+|||||+++....+        
T Consensus       477 Y~~DFEEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~s~~~~skI~rEVk~LArLnHpNVVRYysAWVEs~~~~~~~  556 (1351)
T KOG1035|consen  477 YLNDFEELELLGKGGFGSVVKVRNKLDGREYAIKKIPLKASDKLYSKILREVKLLARLNHPNVVRYYSAWVESTAELTVL  556 (1351)
T ss_pred             HhhhhHHHHHhcCCCCceEEEEeecccchhhhhhhccCchHHHHHHHHHHHHHHHhhcCCcceeeeehhhhccCCccccc
Confidence            446788899999999999999999999999999999765 34456678999999999999999987542110        


Q ss_pred             --------------------------------------------------------c-----------------------
Q 005257          433 --------------------------------------------------------E-----------------------  433 (705)
Q Consensus       433 --------------------------------------------------------~-----------------------  433 (705)
                                                                              +                       
T Consensus       557 ei~~~~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~S~tS~~  636 (1351)
T KOG1035|consen  557 EIVASDSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNLSNTSDS  636 (1351)
T ss_pred             cccccchhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCccccccccccccccccccc
Confidence                                                                    0                       


Q ss_pred             -----------------------c--------CceEEEEeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHh
Q 005257          434 -----------------------K--------GSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLH  482 (705)
Q Consensus       434 -----------------------~--------~~~~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH  482 (705)
                                             +        ..+||-||||+...|++++.++.-.  -.....++++++|++||.|+|
T Consensus       637 e~~~~~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N~~~--~~~d~~wrLFreIlEGLaYIH  714 (1351)
T KOG1035|consen  637 EGSVILDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRNHFN--SQRDEAWRLFREILEGLAYIH  714 (1351)
T ss_pred             CCccccCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHhcccc--hhhHHHHHHHHHHHHHHHHHH
Confidence                                   0        2368899999998888887654311  046788999999999999999


Q ss_pred             cCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecC----------------C-CCcceeeeeeccccCCCccccccC-
Q 005257          483 EGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHG----------------H-GQVASTTRVVGTVGYLAPEVFSSG-  544 (705)
Q Consensus       483 ~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~----------------~-~~~~~~~~~~gt~~y~APE~~~~~-  544 (705)
                      +   +++|||||||.||+||++..+||+|||+|....                . ......+..+||.-|+|||++.+. 
T Consensus       715 ~---~giIHRDLKP~NIFLd~~~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEll~~~~  791 (1351)
T KOG1035|consen  715 D---QGIIHRDLKPRNIFLDSRNSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPELLSDTS  791 (1351)
T ss_pred             h---CceeeccCCcceeEEcCCCCeeecccccchhhhhhhhhHhhccCccccccCCCCcccccccceeeeecHHHhcccc
Confidence            9   999999999999999999999999999997621                0 111234567999999999999764 


Q ss_pred             --CCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhHHHHHhhhcCCCCCHHHHHHHHHHHHHcCCCC
Q 005257          545 --RASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRAKGGFDEDEVERVLHLGLLCAYPD  622 (705)
Q Consensus       545 --~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~l~~~~~~~~~~~~~l~~l~~~Cl~~d  622 (705)
                        +|+.|+|+||+|||++||+.   ||...-+  ...+....+.|.+...        ..+..+....-..++.++++.|
T Consensus       792 ~~~Yn~KiDmYSLGIVlFEM~y---PF~TsME--Ra~iL~~LR~g~iP~~--------~~f~~~~~~~e~slI~~Ll~hd  858 (1351)
T KOG1035|consen  792 SNKYNSKIDMYSLGIVLFEMLY---PFGTSME--RASILTNLRKGSIPEP--------ADFFDPEHPEEASLIRWLLSHD  858 (1351)
T ss_pred             cccccchhhhHHHHHHHHHHhc---cCCchHH--HHHHHHhcccCCCCCC--------cccccccchHHHHHHHHHhcCC
Confidence              59999999999999999985   5654321  1112222333333221        2233445556678999999999


Q ss_pred             CCCCCCHHHHHH
Q 005257          623 PRARPTMRQVVK  634 (705)
Q Consensus       623 P~~RPs~~evl~  634 (705)
                      |.+|||+.|+++
T Consensus       859 P~kRPtA~eLL~  870 (1351)
T KOG1035|consen  859 PSKRPTATELLN  870 (1351)
T ss_pred             CccCCCHHHHhh
Confidence            999999999887

>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta

Probab=100.00  E-value=1.3e-33  Score=303.02  Aligned_cols=257  Identities=19%  Similarity=0.246  Sum_probs=193.3

Q ss_pred             eEEeec--CceEEEEEEEcCCCeEEEEEEeccCC--chhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEEEEeeCC
Q 005257          370 NVIGVG--GNGKVYKGVLEGGGAEIAVKRISHEN--DGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYME  445 (705)
Q Consensus       370 ~~LG~G--~fg~Vy~~~~~~~~~~vavK~i~~~~--~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~lV~E~~~  445 (705)
                      ..||+|  +||+||++.+..+++.||+|++....  ....+.+.+|+.+++.++||||+++++++.. ++..++|+||+.
T Consensus         4 ~~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~-~~~~~~v~e~~~   82 (328)
T cd08226           4 VEIGRGFCNLTSVYLARHTPTGTLVTVRITDLENCTEEHLKALQNEVVLSHFFRHPNIMTSWTVFTT-GSWLWVISPFMA   82 (328)
T ss_pred             HHhCCcccCceeEEEEEEcCCCcEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEeeeEec-CCceEEEEeccc
Confidence            346666  99999999999899999999986542  2345678899999999999999999999876 668899999999


Q ss_pred             CCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecCCCCcce
Q 005257          446 NGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVAS  525 (705)
Q Consensus       446 ~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~~~~~~~  525 (705)
                      +++|.+++.+.... .+++..+..++.|++.||+|||+   .+++||||||+|||++.++.++++||+.+..........
T Consensus        83 ~~~l~~~l~~~~~~-~~~~~~~~~~~~qi~~aL~~lH~---~~ivHrDlkp~Nill~~~~~~~~~~~~~~~~~~~~~~~~  158 (328)
T cd08226          83 YGSANSLLKTYFPE-GMSEALIGNILFGALRGLNYLHQ---NGYIHRNIKASHILISGDGLVSLSGLSHLYSLVRNGQKA  158 (328)
T ss_pred             CCCHHHHHHhhccc-CCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEeCCCcEEEechHHHhhhhccCccc
Confidence            99999998765332 58999999999999999999998   999999999999999999999999998654322111100


Q ss_pred             ------eeeeeccccCCCccccccC--CCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCch--------
Q 005257          526 ------TTRVVGTVGYLAPEVFSSG--RASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKL--------  589 (705)
Q Consensus       526 ------~~~~~gt~~y~APE~~~~~--~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~--------  589 (705)
                            .....++..|+|||++.+.  .++.++|||||||++|||++|+.||......  ............        
T Consensus       159 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~~~~~~--~~~~~~~~~~~~~~~~~~~~  236 (328)
T cd08226         159 KVVYDFPQFSTSVLPWLSPELLRQDLYGYNVKSDIYSVGITACELATGRVPFQDMLRT--QMLLQKLKGPPYSPLDITTF  236 (328)
T ss_pred             cccccccccccCccCccChhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCcChH--HHHHHHhcCCCCCCcccccc
Confidence                  0112345679999998763  4789999999999999999999999764321  111111100000        


Q ss_pred             ------------------h----------HHHHHhhhcCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 005257          590 ------------------L----------DALDARLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKV  635 (705)
Q Consensus       590 ------------------~----------~~id~~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  635 (705)
                                        .          ...+..+.  ..........+.+++.+||+.||++|||+.|+++.
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~li~~~l~~dP~~Rpta~e~l~~  308 (328)
T cd08226         237 PCEESRMKNSQSGVDSGIGESVVAAGMTQTMTSERLR--TPSSKTFSPAFQNLVELCLQQDPEKRPSASSLLSH  308 (328)
T ss_pred             chhhhhhccchhhhhcccccchhcccccccccccccc--chhhhhhhHHHHHHHHHHccCCcccCCCHHHHhhC
Confidence                              0          00000000  11123355678999999999999999999999874

Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig

>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

Probab=100.00  E-value=1.9e-33  Score=301.87  Aligned_cols=264  Identities=20%  Similarity=0.280  Sum_probs=202.9

Q ss_pred             HHHHhCCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccC--CchhHHHHHHHHHHhccCCCCCcceeeeeeeeccCc
Q 005257          359 IEAATKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHE--NDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGS  436 (705)
Q Consensus       359 l~~at~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~--~~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~  436 (705)
                      +...+++|+..+.||+|+||.||++....+++.||||++...  .....+.+.+|++++..++||||+++.+++......
T Consensus         5 ~~~~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~   84 (328)
T cd07856           5 VFEITNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRHENIISLSDIFISPLED   84 (328)
T ss_pred             eeccccceEEEEeecccCCeEEEEEEECCCCCEEEEEEecccccccchhHHHHHHHHHHHhcCCCCeeeEeeeEecCCCc
Confidence            345678899999999999999999999989999999988643  223456788999999999999999999988765667


Q ss_pred             eEEEEeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccce
Q 005257          437 LMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLAR  516 (705)
Q Consensus       437 ~~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~  516 (705)
                      .++|+||+ +++|..++..    ..+++..+..++.|+++||.|||+   .+++||||+|+||++++++.+||+|||++.
T Consensus        85 ~~lv~e~~-~~~L~~~~~~----~~~~~~~~~~~~~ql~~aL~~LH~---~~iiH~dl~p~Nili~~~~~~~l~dfg~~~  156 (328)
T cd07856          85 IYFVTELL-GTDLHRLLTS----RPLEKQFIQYFLYQILRGLKYVHS---AGVVHRDLKPSNILINENCDLKICDFGLAR  156 (328)
T ss_pred             EEEEeehh-ccCHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCHHHEeECCCCCEEeCcccccc
Confidence            89999999 5689888753    257888899999999999999998   999999999999999999999999999987


Q ss_pred             ecCCCCcceeeeeeccccCCCcccccc-CCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHH-----------
Q 005257          517 MHGHGQVASTTRVVGTVGYLAPEVFSS-GRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELM-----------  584 (705)
Q Consensus       517 ~~~~~~~~~~~~~~gt~~y~APE~~~~-~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~-----------  584 (705)
                      ......    ....++..|+|||.+.+ ..++.++|||||||++|||++|+.||...............           
T Consensus       157 ~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (328)
T cd07856         157 IQDPQM----TGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQFSIITDLLGTPPDDVINT  232 (328)
T ss_pred             ccCCCc----CCCcccccccCceeeeccCCcCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHh
Confidence            543321    22356889999999766 56899999999999999999999999764431111111111           


Q ss_pred             -HhCchhHHHHHhhhcCCCCCH-----HHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 005257          585 -VQGKLLDALDARLRAKGGFDE-----DEVERVLHLGLLCAYPDPRARPTMRQVVKV  635 (705)
Q Consensus       585 -~~~~~~~~id~~l~~~~~~~~-----~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  635 (705)
                       ..+...+.+ ..+......+.     .....+.+++..|++.+|++||++.+++..
T Consensus       233 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~ell~~  288 (328)
T cd07856         233 ICSENTLRFV-QSLPKREPVPFSEKFKNADPSAIDLLEKMLVFDPQKRISAAEALAH  288 (328)
T ss_pred             ccchhhHHHH-hhccccCCCcHHHHcCCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence             011111111 01111111111     123678899999999999999999998775

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U

>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase

Probab=100.00  E-value=3.1e-33  Score=292.88  Aligned_cols=242  Identities=24%  Similarity=0.315  Sum_probs=188.0

Q ss_pred             EEeecCceEEEEEEEcCCCeEEEEEEeccCCc---hhHHHHHHHH---HHhccCCCCCcceeeeeeeeccCceEEEEeeC
Q 005257          371 VIGVGGNGKVYKGVLEGGGAEIAVKRISHEND---GGTRAFLAEI---SSLGRLKHKSLVGLRGWCKREKGSLMLVYDYM  444 (705)
Q Consensus       371 ~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~---~~~~~~~~Ei---~~l~~l~Hpniv~l~g~~~~~~~~~~lV~E~~  444 (705)
                      .||+|+||.||++....+++.||+|.+.....   .....+..|.   ..++...||||+++.+.+.. .+..++||||+
T Consensus         1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~~~~v~e~~   79 (278)
T cd05606           1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHT-PDKLSFILDLM   79 (278)
T ss_pred             CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeec-CCEEEEEEecC
Confidence            38999999999999988899999999865421   1222234443   34455679999999988775 66889999999


Q ss_pred             CCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecCCCCcc
Q 005257          445 ENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVA  524 (705)
Q Consensus       445 ~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~~~~~~  524 (705)
                      ++|+|..++....   .+++.++..++.|++.||.|||+   .+++||||||+||+++.++.+||+|||++........ 
T Consensus        80 ~g~~L~~~l~~~~---~l~~~~~~~~~~ql~~~l~~lH~---~~i~H~di~p~nili~~~~~~kl~dfg~~~~~~~~~~-  152 (278)
T cd05606          80 NGGDLHYHLSQHG---VFSEAEMRFYAAEIILGLEHMHN---RFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKP-  152 (278)
T ss_pred             CCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHH---CCEEcCCCCHHHEEECCCCCEEEccCcCccccCccCC-
Confidence            9999999886432   69999999999999999999998   9999999999999999999999999999875533221 


Q ss_pred             eeeeeeccccCCCccccccC-CCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhHHHHHhhhcCCCC
Q 005257          525 STTRVVGTVGYLAPEVFSSG-RASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRAKGGF  603 (705)
Q Consensus       525 ~~~~~~gt~~y~APE~~~~~-~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~l~~~~~~  603 (705)
                        ....|+..|+|||.+.++ .++.++||||+||++|||++|+.||................            ......
T Consensus       153 --~~~~~~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~~~~~~~~~~------------~~~~~~  218 (278)
T cd05606         153 --HASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTL------------TMAVEL  218 (278)
T ss_pred             --cCcCCCcCCcCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCccchHHHHHHhh------------ccCCCC
Confidence              224689999999998754 68999999999999999999999997643211111111110            000122


Q ss_pred             CHHHHHHHHHHHHHcCCCCCCCCC-----CHHHHHH
Q 005257          604 DEDEVERVLHLGLLCAYPDPRARP-----TMRQVVK  634 (705)
Q Consensus       604 ~~~~~~~l~~l~~~Cl~~dP~~RP-----s~~evl~  634 (705)
                      +......+.+++..|+..+|.+||     ++.++++
T Consensus       219 ~~~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~  254 (278)
T cd05606         219 PDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKE  254 (278)
T ss_pred             CCcCCHHHHHHHHHHhhcCHHhccCCCCCCHHHHHh
Confidence            223356788999999999999999     8888875

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co

>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

Probab=100.00  E-value=3.5e-33  Score=301.97  Aligned_cols=270  Identities=21%  Similarity=0.270  Sum_probs=204.2

Q ss_pred             cccCHHHHHHHhCCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCC--chhHHHHHHHHHHhccCCCCCcceeeee
Q 005257          352 HRITYQEIEAATKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHEN--DGGTRAFLAEISSLGRLKHKSLVGLRGW  429 (705)
Q Consensus       352 ~~~~~~el~~at~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~--~~~~~~~~~Ei~~l~~l~Hpniv~l~g~  429 (705)
                      ++....++...+++|...+.||+|+||.||+|....+++.||+|++....  ....+.+.+|+.++++++||||++++++
T Consensus         5 ~~~~~~~~~~~~~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~iv~~~~~   84 (345)
T cd07877           5 RQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV   84 (345)
T ss_pred             hhhHHHHHhhccCceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcchhhHHHHHHHHHHHHHHHcCCCcccceeee
Confidence            34445667778899999999999999999999998889999999987542  2234668889999999999999999998


Q ss_pred             eeec-----cCceEEEEeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccC
Q 005257          430 CKRE-----KGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKE  504 (705)
Q Consensus       430 ~~~~-----~~~~~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~  504 (705)
                      +...     ....+++++++ +++|.+++..    ..+++..+..++.|++.||+|||+   .+++||||||+||+++++
T Consensus        85 ~~~~~~~~~~~~~~lv~~~~-~~~L~~~~~~----~~l~~~~~~~i~~qi~~aL~~LH~---~~ivH~dlkp~NIll~~~  156 (345)
T cd07877          85 FTPARSLEEFNDVYLVTHLM-GADLNNIVKC----QKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNED  156 (345)
T ss_pred             eeecccccccccEEEEehhc-ccCHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHH---CCeeecCCChHHEEEcCC
Confidence            7532     23468888887 7799887753    258999999999999999999998   999999999999999999


Q ss_pred             CCeeeeeeccceecCCCCcceeeeeeccccCCCcccccc-CCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHH
Q 005257          505 MNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSS-GRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWEL  583 (705)
Q Consensus       505 ~~~kL~DFGla~~~~~~~~~~~~~~~gt~~y~APE~~~~-~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~  583 (705)
                      +.+||+|||+++.....    .....|+..|+|||.+.+ ..++.++|||||||++|||++|+.||......  ......
T Consensus       157 ~~~kl~dfg~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~--~~~~~~  230 (345)
T cd07877         157 CELKILDFGLARHTDDE----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI--DQLKLI  230 (345)
T ss_pred             CCEEEeccccccccccc----ccccccCCCccCHHHHhCccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH--HHHHHH
Confidence            99999999998764332    223467899999999866 56889999999999999999999999654321  111111


Q ss_pred             HH-hCchhHHH------------HHhhhcCCCCC-----HHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 005257          584 MV-QGKLLDAL------------DARLRAKGGFD-----EDEVERVLHLGLLCAYPDPRARPTMRQVVKV  635 (705)
Q Consensus       584 ~~-~~~~~~~i------------d~~l~~~~~~~-----~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  635 (705)
                      .. .+.....+            ...+.......     ......+.+++..|++.||.+||++.+++.+
T Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h  300 (345)
T cd07877         231 LRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH  300 (345)
T ss_pred             HHHhCCCCHHHHhhcccHhHHHHHHHhcccCCcchhhhcCCCCHHHHHHHHHHcCCChhhcCCHHHHhcC
Confidence            00 01000000            00000000000     0123457899999999999999999998874

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14

>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

Probab=100.00  E-value=3.6e-33  Score=296.95  Aligned_cols=248  Identities=26%  Similarity=0.360  Sum_probs=197.7

Q ss_pred             CCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccC---CchhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEEEE
Q 005257          365 GFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHE---NDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVY  441 (705)
Q Consensus       365 ~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~---~~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~lV~  441 (705)
                      .|+..+.||+|+||.||+|+...++..+|+|.+...   .....+++.+|+++++.++|+|++++.+++.. ....++||
T Consensus        16 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~lv~   94 (308)
T cd06634          16 LFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLR-EHTAWLVM   94 (308)
T ss_pred             HHHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEEEEEEc-CCeeEEEE
Confidence            366677899999999999999988999999998643   22344678899999999999999999998876 66889999


Q ss_pred             eeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecCCC
Q 005257          442 DYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHG  521 (705)
Q Consensus       442 E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~~~  521 (705)
                      ||+. |+|.+++....  ..+++.++..++.|++.||.|||+   .+++||||||+||+++.++.+||+|||++......
T Consensus        95 e~~~-~~l~~~~~~~~--~~l~~~~~~~~~~~l~~~l~~LH~---~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~  168 (308)
T cd06634          95 EYCL-GSASDLLEVHK--KPLQEVEIAAVTHGALQGLAYLHS---HNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPA  168 (308)
T ss_pred             EccC-CCHHHHHHHcC--CCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCHHhEEECCCCcEEECCcccceeecCc
Confidence            9996 68888775433  258999999999999999999998   99999999999999999999999999998765432


Q ss_pred             CcceeeeeeccccCCCccccc---cCCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhHHHHHhhh
Q 005257          522 QVASTTRVVGTVGYLAPEVFS---SGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDARLR  598 (705)
Q Consensus       522 ~~~~~~~~~gt~~y~APE~~~---~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~l~  598 (705)
                           ....|++.|+|||.+.   ...++.++|||||||++|||++|+.||......  ..... ...+...        
T Consensus       169 -----~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~--~~~~~-~~~~~~~--------  232 (308)
T cd06634         169 -----NXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAM--SALYH-IAQNESP--------  232 (308)
T ss_pred             -----ccccCCccccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCccccHH--HHHHH-HhhcCCC--------
Confidence                 2346788999999974   346788999999999999999999998654321  11111 1111100        


Q ss_pred             cCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHH
Q 005257          599 AKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLE  637 (705)
Q Consensus       599 ~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  637 (705)
                        ..........+.+++.+||+.+|++||++.++++...
T Consensus       233 --~~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~ll~~~~  269 (308)
T cd06634         233 --ALQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRF  269 (308)
T ss_pred             --CcCcccccHHHHHHHHHHhhCCcccCCCHHHHhhCcc
Confidence              1112234466889999999999999999999998754

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin

>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]

Probab=100.00  E-value=3.7e-34  Score=312.45  Aligned_cols=202  Identities=28%  Similarity=0.431  Sum_probs=175.4

Q ss_pred             CCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCC-chhHHHHHHHHHHhccCCCCCcceeeeeeeecc-----CceEE
Q 005257          366 FSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHEN-DGGTRAFLAEISSLGRLKHKSLVGLRGWCKREK-----GSLML  439 (705)
Q Consensus       366 f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~-~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~-----~~~~l  439 (705)
                      +...+.||+|+||.||+|+++.+|+.||||.++... ....+...+|+++|++|+|||||+++++=....     ....+
T Consensus        15 W~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~~~~~vl   94 (732)
T KOG4250|consen   15 WEMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKESSLRPRERWCREIEILKKLNHPNIVKLFDIEETKFLGLVTRLPVL   94 (732)
T ss_pred             eeehhhhcCCccceeeeecccccccchhHHhhhhhcccchHHHHHHHHHHHHHcCchhhhhhcccCCccccCcccccceE
Confidence            344678999999999999999999999999987653 344567889999999999999999998643321     24589


Q ss_pred             EEeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEcc--CC--Ceeeeeeccc
Q 005257          440 VYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDK--EM--NGRLGDFGLA  515 (705)
Q Consensus       440 V~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~--~~--~~kL~DFGla  515 (705)
                      |||||++|||+..|.+-.....|++.+.+.++.+++.||.|||+   ++|+||||||.||++-.  +|  --||+|||.|
T Consensus        95 vmEyC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~LrE---n~IvHRDlKP~NIvl~~Gedgq~IyKLtDfG~A  171 (732)
T KOG4250|consen   95 VMEYCSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHLRE---NGIVHRDLKPGNIVLQIGEDGQSIYKLTDFGAA  171 (732)
T ss_pred             EEeecCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHHH---cCceeccCCCCcEEEeecCCCceEEeeeccccc
Confidence            99999999999999886666689999999999999999999998   99999999999999842  23  3699999999


Q ss_pred             eecCCCCcceeeeeeccccCCCcccccc-CCCCccccEEEEehhHHHHhhCCCCCCCC
Q 005257          516 RMHGHGQVASTTRVVGTVGYLAPEVFSS-GRASTQTDVFGFGILILEVLSGRRPIEEG  572 (705)
Q Consensus       516 ~~~~~~~~~~~~~~~gt~~y~APE~~~~-~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~  572 (705)
                      +....+.  ..+.++||+.|.+||++.. ..|+..+|.|||||++||++||..||.+.
T Consensus       172 rel~d~s--~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG~lPF~p~  227 (732)
T KOG4250|consen  172 RELDDNS--LFTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECATGELPFIPF  227 (732)
T ss_pred             ccCCCCC--eeeeecCchhhcChHHHhhccCcCceeehhhhhhHHHHHhccCCCCCcC
Confidence            9887655  5667899999999999984 78999999999999999999999999754

>PHA03210 serine/threonine kinase US3; Provisional

Probab=100.00  E-value=5.7e-34  Score=322.53  Aligned_cols=290  Identities=19%  Similarity=0.261  Sum_probs=196.9

Q ss_pred             hCCCCcceEEeecCceEEEEEEEcCCC-eEEEEE------------------EeccCCchhHHHHHHHHHHhccCCCCCc
Q 005257          363 TKGFSEENVIGVGGNGKVYKGVLEGGG-AEIAVK------------------RISHENDGGTRAFLAEISSLGRLKHKSL  423 (705)
Q Consensus       363 t~~f~~~~~LG~G~fg~Vy~~~~~~~~-~~vavK------------------~i~~~~~~~~~~~~~Ei~~l~~l~Hpni  423 (705)
                      .++|...+.||+|+||+||++..+... ...++|                  .+. ........+.+|+.+|++++||||
T Consensus       147 ~~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~-~~~~~~~~~~~Ei~il~~l~HpnI  225 (501)
T PHA03210        147 LAHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVK-AGSRAAIQLENEILALGRLNHENI  225 (501)
T ss_pred             hhccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhh-cchHHHHHHHHHHHHHHhCCCCCc
Confidence            467999999999999999998865322 112222                  111 122234568899999999999999


Q ss_pred             ceeeeeeeeccCceEEEEeeCCCCChhHHHHhcCC--CCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEE
Q 005257          424 VGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDG--SMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLL  501 (705)
Q Consensus       424 v~l~g~~~~~~~~~~lV~E~~~~gsL~~~L~~~~~--~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILl  501 (705)
                      +++++++.. .+..++|+|++. ++|..++.....  .......++..++.||+.||.|||+   ++|+||||||+|||+
T Consensus       226 v~l~~~~~~-~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~---~gIiHrDLKP~NILl  300 (501)
T PHA03210        226 LKIEEILRS-EANTYMITQKYD-FDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHD---KKLIHRDIKLENIFL  300 (501)
T ss_pred             CcEeEEEEE-CCeeEEEEeccc-cCHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEE
Confidence            999999876 667899999995 577777754321  1134466788899999999999998   999999999999999


Q ss_pred             ccCCCeeeeeeccceecCCCCcceeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhhCCCC-CCCCCccHHHHH
Q 005257          502 DKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRP-IEEGKPNLVEMV  580 (705)
Q Consensus       502 d~~~~~kL~DFGla~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~P-f~~~~~~~~~~v  580 (705)
                      +.++.+||+|||+++.+............||..|+|||++.+..++.++|||||||++|||++|..+ +..........+
T Consensus       301 ~~~~~vkL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~~~~~p~~~~~~~~~~~~  380 (501)
T PHA03210        301 NCDGKIVLGDFGTAMPFEKEREAFDYGWVGTVATNSPEILAGDGYCEITDIWSCGLILLDMLSHDFCPIGDGGGKPGKQL  380 (501)
T ss_pred             CCCCCEEEEeCCCceecCcccccccccccCCcCCCCchhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCccCCCCCHHHHH
Confidence            9999999999999987765443333446799999999999998999999999999999999998754 433222211111


Q ss_pred             HHHHHhCchhHHHHHhhhcCCCCCHHHHHHHHHHHHHcCCCCCCCC-CCHHHHHHHHHhccccCCCCCcchhhHHHHHHh
Q 005257          581 WELMVQGKLLDALDARLRAKGGFDEDEVERVLHLGLLCAYPDPRAR-PTMRQVVKVLEGKIEAGIENETEDMDAYLLQQV  659 (705)
Q Consensus       581 ~~~~~~~~~~~~id~~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~R-Ps~~evl~~L~~~~~~~~~~~~~~~~~~~~~~~  659 (705)
                      .+.+..-...   +      ..++. ....+.+.+..-   ..... .+...+++.+             ..+..+.+++
T Consensus       381 ~~~~~~~~~~---~------~~~p~-~~~~~~~~i~~~---~~~~~~~~~~~~~~~~-------------~~~~~~~~li  434 (501)
T PHA03210        381 LKIIDSLSVC---D------EEFPD-PPCKLFDYIDSA---EIDHAGHSVPPLIRNL-------------GLPADFEYPL  434 (501)
T ss_pred             HHHHHhcccC---h------hhcCC-cHHHHHHHhhhh---hcccCccchhhHHHhc-------------CCChHHHHHH
Confidence            1111100000   0      00100 011112211110   01111 1112222111             1223355667


Q ss_pred             hccccccccccccccCCCCCCCccc
Q 005257          660 KSKDMWANYSRSFGYGYATHPTFHD  684 (705)
Q Consensus       660 ~~~~~~~~~~r~~~~~~~~hp~f~~  684 (705)
                      .++..++|..|.++.+++.||||..
T Consensus       435 ~kmL~~DP~~Rpsa~elL~hp~f~~  459 (501)
T PHA03210        435 VKMLTFDWHLRPGAAELLALPLFSA  459 (501)
T ss_pred             HHHhccCcccCcCHHHHhhChhhhc
Confidence            7888999999999999999999965

>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]

Probab=100.00  E-value=2e-35  Score=287.84  Aligned_cols=255  Identities=25%  Similarity=0.297  Sum_probs=196.3

Q ss_pred             CcceEEeecCceEEEEEEEcCCCeEEEEEEeccCCc-hhHHHHHHHHHHhccC-CCCCcceeeeeeeeccCceEEEEeeC
Q 005257          367 SEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHEND-GGTRAFLAEISSLGRL-KHKSLVGLRGWCKREKGSLMLVYDYM  444 (705)
Q Consensus       367 ~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~-~~~~~~~~Ei~~l~~l-~Hpniv~l~g~~~~~~~~~~lV~E~~  444 (705)
                      +....||.|+||+|+|-.++..|+.+|||+++.... ...++++.|.+...+- +.||||+++|.+.. ++..|+.||.|
T Consensus        67 qdlg~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~~keq~rll~e~d~~mks~~cp~IVkfyGa~F~-EGdcWiCMELM  145 (361)
T KOG1006|consen   67 QDLGEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNIEKEQKRLLMEHDTVMKSSNCPNIVKFYGALFS-EGDCWICMELM  145 (361)
T ss_pred             HHHHHhcCCcchhhhhhhcCccCcEEEEEEeeeccchHHHHHHHHHHHHHHhhcCCcHHHHHhhhhhc-CCceeeeHHHH
Confidence            335679999999999999999999999999987754 5567888998875554 79999999999987 66789999999


Q ss_pred             CCCChhHHHHhc--CCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecCCCC
Q 005257          445 ENGSLDKWIFQC--DGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQ  522 (705)
Q Consensus       445 ~~gsL~~~L~~~--~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~~~~  522 (705)
                      . .||+.+.+.-  .....+++.-+-+|......||.||.+  +..|||||+||+|||||..|.+||||||++-.....-
T Consensus       146 d-~SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~--~lkiIHRDvKPSNILldr~G~vKLCDFGIcGqLv~Si  222 (361)
T KOG1006|consen  146 D-ISLDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKE--ELKIIHRDVKPSNILLDRHGDVKLCDFGICGQLVDSI  222 (361)
T ss_pred             h-hhHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHH--HhhhhhccCChhheEEecCCCEeeecccchHhHHHHH
Confidence            5 4777654321  112368888888999999999999998  5899999999999999999999999999986554322


Q ss_pred             cceeeeeeccccCCCcccccc--CCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhHHHHHhhhcC
Q 005257          523 VASTTRVVGTVGYLAPEVFSS--GRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRAK  600 (705)
Q Consensus       523 ~~~~~~~~gt~~y~APE~~~~--~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~l~~~  600 (705)
                        ..+.-+|-..|||||.+..  ..|+.++||||||+.|+|+.||+.|+..-.. ..+.+ ..+..|......-      
T Consensus       223 --AkT~daGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr~w~s-vfeql-~~Vv~gdpp~l~~------  292 (361)
T KOG1006|consen  223 --AKTVDAGCRPYMAPERIDPSDKGYDIRSDVWSLGITLYEVATGNFPYRKWDS-VFEQL-CQVVIGDPPILLF------  292 (361)
T ss_pred             --HhhhccCCccccChhccCCccCCcchhhhhhhhcceEeeeecCCCCcchHHH-HHHHH-HHHHcCCCCeecC------
Confidence              2334578899999999964  3489999999999999999999999975321 11111 1122222211100      


Q ss_pred             CCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 005257          601 GGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKV  635 (705)
Q Consensus       601 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  635 (705)
                      ..-..+....+...+..|+.+|-..||+..++.++
T Consensus       293 ~~~~~~~s~~~~~fintCl~Kd~~~Rpky~~Lk~~  327 (361)
T KOG1006|consen  293 DKECVHYSFSMVRFINTCLIKDRSDRPKYDDLKKF  327 (361)
T ss_pred             cccccccCHHHHHHHHHHhhcccccCcchhhhhcC
Confidence            11112345678889999999999999999998774

>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein

Probab=100.00  E-value=3.3e-33  Score=297.53  Aligned_cols=252  Identities=21%  Similarity=0.270  Sum_probs=188.8

Q ss_pred             CceEEEEEEEcCCCeEEEEEEeccC--CchhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEEEEeeCCCCChhHHH
Q 005257          376 GNGKVYKGVLEGGGAEIAVKRISHE--NDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWI  453 (705)
Q Consensus       376 ~fg~Vy~~~~~~~~~~vavK~i~~~--~~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~lV~E~~~~gsL~~~L  453 (705)
                      ++|.||.+....+++.||||+++..  .....+.+.+|+++++.++||||+++++++.. +...+++|||+++|+|.+++
T Consensus        12 ~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~-~~~~~~~~e~~~~~~l~~~l   90 (314)
T cd08216          12 DLMIVHLAKHKPTNTLVAVKKINLDSCSKEDLKLLQQEIITSRQLQHPNILPYVTSFIV-DSELYVVSPLMAYGSCEDLL   90 (314)
T ss_pred             CCceEEEEEecCCCCEEEEEEEeccccchhHHHHHHHHHHHHHhcCCcchhhhhheeec-CCeEEEEEeccCCCCHHHHH
Confidence            4455555555567899999998754  34456789999999999999999999998775 67889999999999999999


Q ss_pred             HhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecCCCCc------ceee
Q 005257          454 FQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQV------ASTT  527 (705)
Q Consensus       454 ~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~~~~~------~~~~  527 (705)
                      ...... .+++..+..++.|++.||.|||+   .+|+||||||+||+++.++.+||+|||.+........      ....
T Consensus        91 ~~~~~~-~~~~~~~~~~~~~l~~~L~~LH~---~~ivH~dlk~~Nili~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~  166 (314)
T cd08216          91 KTHFPE-GLPELAIAFILKDVLNALDYIHS---KGFIHRSVKASHILLSGDGKVVLSGLRYSVSMIKHGKRQRVVHDFPK  166 (314)
T ss_pred             HHhccc-CCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCcceEEEecCCceEEecCccceeeccccccccccccccc
Confidence            764332 58899999999999999999998   9999999999999999999999999999875432211      1112


Q ss_pred             eeeccccCCCcccccc--CCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhHHHH-----------
Q 005257          528 RVVGTVGYLAPEVFSS--GRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALD-----------  594 (705)
Q Consensus       528 ~~~gt~~y~APE~~~~--~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~~id-----------  594 (705)
                      ...++..|+|||++..  ..++.++|||||||++|||++|+.||......  ....+.. .+.....++           
T Consensus       167 ~~~~~~~y~aPE~~~~~~~~~~~~~Diws~G~il~el~~g~~pf~~~~~~--~~~~~~~-~~~~~~~~~~~~~~~~~~~~  243 (314)
T cd08216         167 SSVKNLPWLSPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKDMPAT--QMLLEKV-RGTVPCLLDKSTYPLYEDSM  243 (314)
T ss_pred             cccccccccCHHHhcCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHH--HHHHHHH-hccCccccccCchhhhcCCc
Confidence            2456788999999865  35889999999999999999999999764321  1111111 110000000           


Q ss_pred             ---------H--hhhcCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 005257          595 ---------A--RLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKV  635 (705)
Q Consensus       595 ---------~--~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  635 (705)
                               .  ...............+.+++..||+.||++|||+.+++++
T Consensus       244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~  295 (314)
T cd08216         244 SQSRSSNEHPNNRDSVDHPYTRTFSEHFHQFVELCLQRDPESRPSASQLLNH  295 (314)
T ss_pred             CcccccccccchhhhhhcchhhHHHHHHHHHHHHHhhcCCCcCcCHHHHhcC
Confidence                     0  0000011122334578889999999999999999999884

Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc

>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=100.00  E-value=1.2e-33  Score=281.43  Aligned_cols=280  Identities=21%  Similarity=0.299  Sum_probs=210.7

Q ss_pred             CHHHHHHHhCCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCCchhHHHHHHHHHHhccC-CCCCcceeeeeeeec
Q 005257          355 TYQEIEAATKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRL-KHKSLVGLRGWCKRE  433 (705)
Q Consensus       355 ~~~el~~at~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~~~~~~~~~Ei~~l~~l-~Hpniv~l~g~~~~~  433 (705)
                      +++|+...|     .+.||+|+|+.|--++...++..+|||++.+.....+....+|++++... .|+||++++.|+.+ 
T Consensus        74 ~F~d~YkLt-----~e~LGeGAyasVqtcv~i~t~~EYAVKiidKq~gHsR~RvfREVe~f~~Cqgh~nilqLiefFEd-  147 (463)
T KOG0607|consen   74 KFEDMYKLT-----SELLGEGAYASVQTCVSIQTGKEYAVKIIDKQPGHSRSRVFREVETFYQCQGHKNILQLIEFFED-  147 (463)
T ss_pred             hHHHHHHhH-----HHHhcCccceeeeeeeeeccchhhhhhhhhcCCchHHHHHHHHHHHHHHhcCCccHHHHHHHhcc-
Confidence            356776666     56799999999999999999999999999888777778899999999998 49999999999876 


Q ss_pred             cCceEEEEeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCC---eeee
Q 005257          434 KGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMN---GRLG  510 (705)
Q Consensus       434 ~~~~~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~---~kL~  510 (705)
                      +...|||||-|.||+|..+|.+..   .+++.+..+++++|+.||.+||.   ++|.||||||+|||-.+-..   +||+
T Consensus       148 d~~FYLVfEKm~GGplLshI~~~~---~F~E~EAs~vvkdia~aLdFlH~---kgIAHRDlKPENiLC~~pn~vsPvKiC  221 (463)
T KOG0607|consen  148 DTRFYLVFEKMRGGPLLSHIQKRK---HFNEREASRVVKDIASALDFLHT---KGIAHRDLKPENILCESPNKVSPVKIC  221 (463)
T ss_pred             cceEEEEEecccCchHHHHHHHhh---hccHHHHHHHHHHHHHHHHHHhh---cCcccccCCccceeecCCCCcCceeee
Confidence            778999999999999999997654   79999999999999999999998   99999999999999976543   7999


Q ss_pred             eeccceecCC------CCcceeeeeeccccCCCccccc-----cCCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHH
Q 005257          511 DFGLARMHGH------GQVASTTRVVGTVGYLAPEVFS-----SGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEM  579 (705)
Q Consensus       511 DFGla~~~~~------~~~~~~~~~~gt~~y~APE~~~-----~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~  579 (705)
                      ||.|..-...      ...+.....+|+..|||||+..     ...|+.++|.||||||||-|++|..||.+....-..|
T Consensus       222 DfDLgSg~k~~~~~spastP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~Cg~dCGW  301 (463)
T KOG0607|consen  222 DFDLGSGIKLNNDCSPASTPELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGHCGADCGW  301 (463)
T ss_pred             ccccccccccCCCCCCCCCccccCcccchhhcchhHHhhhccccccccccccHHHHHHHHHHHHhCCCCccCccCCcCCc
Confidence            9998753321      1222334468999999999863     2358999999999999999999999998643211111


Q ss_pred             HHHHHHhCchhHHHHHhhhcCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH-HhccccCCCCCcchhhHHHHHH
Q 005257          580 VWELMVQGKLLDALDARLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVL-EGKIEAGIENETEDMDAYLLQQ  658 (705)
Q Consensus       580 v~~~~~~~~~~~~id~~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L-~~~~~~~~~~~~~~~~~~~~~~  658 (705)
                           .+              ++....+-+.|.                     +.+ ++..+ .|+.+.......-.++
T Consensus       302 -----dr--------------Ge~Cr~CQ~~LF---------------------esIQEGkYe-FPdkdWahIS~eakdl  340 (463)
T KOG0607|consen  302 -----DR--------------GEVCRVCQNKLF---------------------ESIQEGKYE-FPDKDWAHISSEAKDL  340 (463)
T ss_pred             -----cC--------------CCccHHHHHHHH---------------------HHHhccCCc-CChhhhHHhhHHHHHH
Confidence                 11              111111111111                     112 12223 4444444444444455


Q ss_pred             hhccccccccccccccCCCCCCCcccccc
Q 005257          659 VKSKDMWANYSRSFGYGYATHPTFHDIRQ  687 (705)
Q Consensus       659 ~~~~~~~~~~~r~~~~~~~~hp~f~~~~~  687 (705)
                      +.....-++..|..+...++|||+.-..+
T Consensus       341 isnLlvrda~~rlsa~~vlnhPw~~~~~~  369 (463)
T KOG0607|consen  341 ISNLLVRDAKQRLSAAQVLNHPWVQRCAP  369 (463)
T ss_pred             HHHHHhccHHhhhhhhhccCCccccccch
Confidence            55545556777888888899999975544

>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

Probab=100.00  E-value=1.3e-32  Score=293.45  Aligned_cols=245  Identities=24%  Similarity=0.363  Sum_probs=195.2

Q ss_pred             CCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCCc---hhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEEEEe
Q 005257          366 FSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHEND---GGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYD  442 (705)
Q Consensus       366 f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~---~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~lV~E  442 (705)
                      |...+.||+|+||.||+|+...+++.|++|++.....   ...+.+.+|+++++.++|||++++++++.. ....++|||
T Consensus        23 ~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-~~~~~lv~e  101 (313)
T cd06633          23 FVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLK-EHTAWLVME  101 (313)
T ss_pred             hhcceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEe-CCEEEEEEe
Confidence            5557789999999999999988899999999875422   334578899999999999999999998876 678899999


Q ss_pred             eCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecCCCC
Q 005257          443 YMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQ  522 (705)
Q Consensus       443 ~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~~~~  522 (705)
                      |+. |+|.+++....  ..+++.++..++.|++.||.|||+   .+++|+||+|+||+++.++.+||+|||++.....  
T Consensus       102 ~~~-~~l~~~l~~~~--~~l~~~~~~~~~~qi~~al~~LH~---~gi~H~dl~p~nili~~~~~~kL~dfg~~~~~~~--  173 (313)
T cd06633         102 YCL-GSASDLLEVHK--KPLQEVEIAAITHGALQGLAYLHS---HNMIHRDIKAGNILLTEPGQVKLADFGSASKSSP--  173 (313)
T ss_pred             cCC-CCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCChhhEEECCCCCEEEeecCCCcccCC--
Confidence            996 57877776533  258999999999999999999998   9999999999999999999999999999864322  


Q ss_pred             cceeeeeeccccCCCccccc---cCCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhHHHHHhhhc
Q 005257          523 VASTTRVVGTVGYLAPEVFS---SGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRA  599 (705)
Q Consensus       523 ~~~~~~~~gt~~y~APE~~~---~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~l~~  599 (705)
                         .....|+..|+|||++.   ...++.++|||||||++|||++|..||.....  ...+..... ....         
T Consensus       174 ---~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~~--~~~~~~~~~-~~~~---------  238 (313)
T cd06633         174 ---ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNA--MSALYHIAQ-NDSP---------  238 (313)
T ss_pred             ---CCCccccccccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCh--HHHHHHHHh-cCCC---------
Confidence               12346889999999984   35688899999999999999999999876432  111111111 1000         


Q ss_pred             CCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 005257          600 KGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKV  635 (705)
Q Consensus       600 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  635 (705)
                       ..........+.+++.+||+.+|.+||++.+++.+
T Consensus       239 -~~~~~~~~~~l~~li~~~l~~~P~~Rp~~~~~l~~  273 (313)
T cd06633         239 -TLQSNEWTDSFRGFVDYCLQKIPQERPASAELLRH  273 (313)
T ss_pred             -CCCccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence             11111223467889999999999999999999875

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co

>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

Probab=100.00  E-value=2.9e-33  Score=302.20  Aligned_cols=262  Identities=24%  Similarity=0.327  Sum_probs=197.2

Q ss_pred             CCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCCchhHHHHHHHHHHhccCCCCCcceeeeeeeecc---------
Q 005257          364 KGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREK---------  434 (705)
Q Consensus       364 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~---------  434 (705)
                      .+|...+.||.|+||.||+|....++..||+|++........+.+.+|++++++++||||+++++.+....         
T Consensus         5 ~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~   84 (342)
T cd07854           5 SRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTEDVGS   84 (342)
T ss_pred             cceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCCCchHHHHHHHHHHHHhcCCCcchhhHhhhccccccccccccc
Confidence            57888999999999999999999999999999997766666778999999999999999999998665322         


Q ss_pred             ----CceEEEEeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEc-cCCCeee
Q 005257          435 ----GSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLD-KEMNGRL  509 (705)
Q Consensus       435 ----~~~~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld-~~~~~kL  509 (705)
                          ...++||||++ ++|.+++..    ..+++..+..++.|++.||.|||+   .+++||||||+||+++ +++.+||
T Consensus        85 ~~~~~~~~lv~e~~~-~~L~~~~~~----~~l~~~~~~~~~~qi~~aL~~LH~---~givH~dikp~Nili~~~~~~~kl  156 (342)
T cd07854          85 LTELNSVYIVQEYME-TDLANVLEQ----GPLSEEHARLFMYQLLRGLKYIHS---ANVLHRDLKPANVFINTEDLVLKI  156 (342)
T ss_pred             ccccceEEEEeeccc-ccHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCHHHEEEcCCCceEEE
Confidence                35789999997 588888753    258899999999999999999998   9999999999999997 4567899


Q ss_pred             eeeccceecCCCCcc--eeeeeeccccCCCcccccc-CCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHh
Q 005257          510 GDFGLARMHGHGQVA--STTRVVGTVGYLAPEVFSS-GRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQ  586 (705)
Q Consensus       510 ~DFGla~~~~~~~~~--~~~~~~gt~~y~APE~~~~-~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~  586 (705)
                      +|||+++........  ......|+..|+|||.+.. ..++.++|||||||++|||++|+.||....+.  +........
T Consensus       157 ~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~--~~~~~~~~~  234 (342)
T cd07854         157 GDFGLARIVDPHYSHKGYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKPLFAGAHEL--EQMQLILES  234 (342)
T ss_pred             CCcccceecCCccccccccccccccccccCHHHHhCccccCchhhHHHHHHHHHHHHhCCCCCCCCCHH--HHHHHHHHh
Confidence            999999865432111  1122357889999998754 56788999999999999999999999754321  111111100


Q ss_pred             C---------chhHHHHHhhh---cCCCCC-----HHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 005257          587 G---------KLLDALDARLR---AKGGFD-----EDEVERVLHLGLLCAYPDPRARPTMRQVVKV  635 (705)
Q Consensus       587 ~---------~~~~~id~~l~---~~~~~~-----~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  635 (705)
                      .         .....+.....   .....+     ......+.+++..||+.||++||++.+++++
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h  300 (342)
T cd07854         235 VPVVREEDRNELLNVIPSFVRNDGGEPRRPLRDLLPGVNPEALDFLEQILTFNPMDRLTAEEALMH  300 (342)
T ss_pred             cCCCChHHhhhhhhhhhhhhhhcccccCCCHHHHccCCCHHHHHHHHHHhCCCchhccCHHHHhCC
Confidence            0         00000000000   000000     1123567889999999999999999999863

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi

>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

Probab=100.00  E-value=1.3e-32  Score=297.20  Aligned_cols=261  Identities=21%  Similarity=0.307  Sum_probs=198.8

Q ss_pred             HHHhCCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCC--chhHHHHHHHHHHhccCCCCCcceeeeeeeecc---
Q 005257          360 EAATKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHEN--DGGTRAFLAEISSLGRLKHKSLVGLRGWCKREK---  434 (705)
Q Consensus       360 ~~at~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~--~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~---  434 (705)
                      ....++|...+.||+|+||.||++....++..||||++....  ....+.+.+|+.++++++||||+++++++....   
T Consensus        11 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~   90 (343)
T cd07880          11 WEVPDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLSLD   90 (343)
T ss_pred             hccccceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCccceeeeecCCcccc
Confidence            335678999999999999999999999889999999986432  223456889999999999999999999876432   


Q ss_pred             --CceEEEEeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeee
Q 005257          435 --GSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDF  512 (705)
Q Consensus       435 --~~~~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DF  512 (705)
                        ...++||||+ +++|.+++..    ..+++..+..++.|++.||.|||+   .+|+||||||+||+++.++.+||+||
T Consensus        91 ~~~~~~lv~e~~-~~~l~~~~~~----~~l~~~~~~~i~~qi~~al~~LH~---~gi~H~dlkp~Nill~~~~~~kl~df  162 (343)
T cd07880          91 RFHDFYLVMPFM-GTDLGKLMKH----EKLSEDRIQFLVYQMLKGLKYIHA---AGIIHRDLKPGNLAVNEDCELKILDF  162 (343)
T ss_pred             ccceEEEEEecC-CCCHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEcCCCCEEEeec
Confidence              2458999999 6799888753    258999999999999999999998   99999999999999999999999999


Q ss_pred             ccceecCCCCcceeeeeeccccCCCcccccc-CCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHh-Cchh
Q 005257          513 GLARMHGHGQVASTTRVVGTVGYLAPEVFSS-GRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQ-GKLL  590 (705)
Q Consensus       513 Gla~~~~~~~~~~~~~~~gt~~y~APE~~~~-~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~-~~~~  590 (705)
                      |+++......    ....+++.|+|||.+.+ ..++.++|||||||++|+|++|+.||.....  .......+.. +...
T Consensus       163 g~~~~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~--~~~~~~~~~~~~~~~  236 (343)
T cd07880         163 GLARQTDSEM----TGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKGHDH--LDQLMEIMKVTGTPS  236 (343)
T ss_pred             ccccccccCc----cccccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCH--HHHHHHHHHhcCCCC
Confidence            9998654322    23467889999999876 4588999999999999999999999976432  1111111110 0000


Q ss_pred             HHHHHh------------hhcCC-----CCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHH
Q 005257          591 DALDAR------------LRAKG-----GFDEDEVERVLHLGLLCAYPDPRARPTMRQVVK  634 (705)
Q Consensus       591 ~~id~~------------l~~~~-----~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~  634 (705)
                      ..+...            +....     .........+.+++..|++.||++|||+.+++.
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~t~~~~l~  297 (343)
T cd07880         237 KEFVQKLQSEDAKNYVKKLPRFRKKDFRSLLPNANPLAVNVLEKMLVLDAESRITAAEALA  297 (343)
T ss_pred             HHHHHhhcchhHHHHHHhccccCcchHHHhccCCChHHHHHHHHHcCCChhhCCCHHHHhc
Confidence            000000            00000     000122345789999999999999999999984

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12

>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

Probab=100.00  E-value=6.6e-33  Score=286.75  Aligned_cols=251  Identities=22%  Similarity=0.332  Sum_probs=197.4

Q ss_pred             CCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccC-----CchhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEE
Q 005257          365 GFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHE-----NDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLML  439 (705)
Q Consensus       365 ~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~-----~~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~l  439 (705)
                      +|...+.||+|+||.||++.+...+..+++|.++..     ......++..|+.++++++||||+++++++.. ....++
T Consensus         1 ~y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~l   79 (260)
T cd08222           1 RYILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASFLE-RDAFCI   79 (260)
T ss_pred             CceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHHhc-CCceEE
Confidence            477889999999999999999876666666665432     22234457789999999999999999998876 567899


Q ss_pred             EEeeCCCCChhHHHHhc-CCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceec
Q 005257          440 VYDYMENGSLDKWIFQC-DGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMH  518 (705)
Q Consensus       440 V~E~~~~gsL~~~L~~~-~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~  518 (705)
                      ||||+++++|.+++... .....+++.+++.++.|++.||.|||+   .+++|+||||+||++++ +.+||+|||+++..
T Consensus        80 v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~---~~i~h~~l~~~nili~~-~~~~l~d~g~~~~~  155 (260)
T cd08222          80 ITEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQ---RRILHRDLKAKNIFLKN-NLLKIGDFGVSRLL  155 (260)
T ss_pred             EEEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHH---cCccccCCChhheEeec-CCEeecccCceeec
Confidence            99999999999988653 223469999999999999999999998   99999999999999975 56999999999766


Q ss_pred             CCCCcceeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhHHHHHhhh
Q 005257          519 GHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDARLR  598 (705)
Q Consensus       519 ~~~~~~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~l~  598 (705)
                      ..... ......|++.|+|||.+.+..++.++|+||||+++|+|++|..||.....  .... .....+..         
T Consensus       156 ~~~~~-~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~~~~~~~~~~~--~~~~-~~~~~~~~---------  222 (260)
T cd08222         156 MGSCD-LATTFTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEMCCLAHAFEGQNF--LSVV-LRIVEGPT---------  222 (260)
T ss_pred             CCCcc-cccCCCCCcCccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCccH--HHHH-HHHHcCCC---------
Confidence            43322 12234578899999999888889999999999999999999999965331  1111 11111110         


Q ss_pred             cCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 005257          599 AKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKV  635 (705)
Q Consensus       599 ~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  635 (705)
                        ...+......+.+++.+||+.+|++||++.++++.
T Consensus       223 --~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~  257 (260)
T cd08222         223 --PSLPETYSRQLNSIMQSMLNKDPSLRPSAAEILRN  257 (260)
T ss_pred             --CCCcchhcHHHHHHHHHHhcCChhhCcCHHHHhhC
Confidence              12233455678899999999999999999999863

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check

>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]

Probab=100.00  E-value=1.9e-33  Score=287.28  Aligned_cols=301  Identities=19%  Similarity=0.243  Sum_probs=215.4

Q ss_pred             HHhCCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCCchhHHHHHHHHHHhccCC--CCC----cceeeeeeeecc
Q 005257          361 AATKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLK--HKS----LVGLRGWCKREK  434 (705)
Q Consensus       361 ~at~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~~~~~~~~~Ei~~l~~l~--Hpn----iv~l~g~~~~~~  434 (705)
                      ..+++|.+...+|+|.||.|-++.+..++..||||+++... .-.+.-+-|+++|++|.  -|+    ++++.+|+.- .
T Consensus        86 ~l~~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V~-kYreAa~iEi~vLqki~~~DP~g~~rcv~m~~wFdy-r  163 (415)
T KOG0671|consen   86 ILTNRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKNVD-KYREAALIEIEVLQKINESDPNGKFRCVQMRDWFDY-R  163 (415)
T ss_pred             ccccceehhhhhcCCcccceEEEeecCCCceehHHHHHHHH-HHhhHHHHHHHHHHHHHhcCCCCceEEEeeehhhhc-c
Confidence            34788999999999999999999999999999999986543 23445577999999993  232    6778887765 7


Q ss_pred             CceEEEEeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEcc-----------
Q 005257          435 GSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDK-----------  503 (705)
Q Consensus       435 ~~~~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~-----------  503 (705)
                      ++.|||+|.+ |.|+.++|..++.. +++...+..|+.|+++++++||+   .+++|-||||+|||+.+           
T Consensus       164 ghiCivfell-G~S~~dFlk~N~y~-~fpi~~ir~m~~QL~~sv~fLh~---~kl~HTDLKPENILfvss~~~~~~~~k~  238 (415)
T KOG0671|consen  164 GHICIVFELL-GLSTFDFLKENNYI-PFPIDHIRHMGYQLLESVAFLHD---LKLTHTDLKPENILFVSSEYFKTYNPKK  238 (415)
T ss_pred             CceEEEEecc-ChhHHHHhccCCcc-ccchHHHHHHHHHHHHHHHHHHh---cceeecCCChheEEEeccceEEEeccCC
Confidence            8999999999 56999999876544 79999999999999999999999   99999999999999921           


Q ss_pred             ---------CCCeeeeeeccceecCCCCcceeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhhCCCCCCCCCc
Q 005257          504 ---------EMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKP  574 (705)
Q Consensus       504 ---------~~~~kL~DFGla~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~  574 (705)
                               +..+||+|||.|.......    ...+.|..|+|||++.+-.++.++||||+||||.|+.+|...|+....
T Consensus       239 ~~~~~r~~ks~~I~vIDFGsAtf~~e~h----s~iVsTRHYRAPEViLgLGwS~pCDvWSiGCIL~ElytG~~LFqtHen  314 (415)
T KOG0671|consen  239 KVCFIRPLKSTAIKVIDFGSATFDHEHH----STIVSTRHYRAPEVILGLGWSQPCDVWSIGCILVELYTGETLFQTHEN  314 (415)
T ss_pred             ccceeccCCCcceEEEecCCcceeccCc----ceeeeccccCCchheeccCcCCccCceeeeeEEEEeeccceecccCCc
Confidence                     3458999999998754433    446889999999999999999999999999999999999999986542


Q ss_pred             cHHHHHHHHHHhCchhHHHHHhhhcCCCCCHHHHHHHHHHHHHcCCCC-CCCCCCHHHHHHHHHhccccCCCCCcchhhH
Q 005257          575 NLVEMVWELMVQGKLLDALDARLRAKGGFDEDEVERVLHLGLLCAYPD-PRARPTMRQVVKVLEGKIEAGIENETEDMDA  653 (705)
Q Consensus       575 ~~~~~v~~~~~~~~~~~~id~~l~~~~~~~~~~~~~l~~l~~~Cl~~d-P~~RPs~~evl~~L~~~~~~~~~~~~~~~~~  653 (705)
                       .-........-|.++..+-.+..         .+....-+  |+..+ -..+-.++.+.+...-+..  ..........
T Consensus       315 -~EHLaMMerIlGp~P~~mi~r~~---------~~Kyf~~~--rldw~e~~~~~~~k~v~~~ckpl~~--~~~~~d~e~~  380 (415)
T KOG0671|consen  315 -LEHLAMMERILGPIPSRMIKKTR---------KEKYFRRG--RLDWPEVSSKGKSKYVFEPCKPLKK--YMLQDDLEHV  380 (415)
T ss_pred             -HHHHHHHHHhhCCCcHHHhhhhh---------hHhhhhcc--cccCccccccccchhhhcCCccHHH--HhccCcHHHh
Confidence             21221111111222222111110         11112111  33211 1111112222221110000  0011122344


Q ss_pred             HHHHHhhccccccccccccccCCCCCCCccccc
Q 005257          654 YLLQQVKSKDMWANYSRSFGYGYATHPTFHDIR  686 (705)
Q Consensus       654 ~~~~~~~~~~~~~~~~r~~~~~~~~hp~f~~~~  686 (705)
                      .+.++++.+..++|..|.+..+|+.||||.-++
T Consensus       381 ~LfDLl~~mL~fDP~~RiTl~EAL~HpFF~~~~  413 (415)
T KOG0671|consen  381 QLFDLLRRMLEFDPARRITLREALSHPFFARLT  413 (415)
T ss_pred             HHHHHHHHHHccCccccccHHHHhcCHHhhcCC
Confidence            588999999999999999999999999998665

>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases

Probab=100.00  E-value=8.3e-33  Score=283.75  Aligned_cols=237  Identities=26%  Similarity=0.327  Sum_probs=194.6

Q ss_pred             EeecCceEEEEEEEcCCCeEEEEEEeccCCc---hhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEEEEeeCCCCC
Q 005257          372 IGVGGNGKVYKGVLEGGGAEIAVKRISHEND---GGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGS  448 (705)
Q Consensus       372 LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~---~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~lV~E~~~~gs  448 (705)
                      ||+|+||.||++....+++.+|+|.+.....   .....+..|++++++++||||+++++.+.. +...++||||+++++
T Consensus         1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~~v~e~~~~~~   79 (250)
T cd05123           1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYAFQT-EEKLYLVLEYAPGGE   79 (250)
T ss_pred             CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHHHHHeec-CCeeEEEEecCCCCc
Confidence            6899999999999988899999999865432   245678999999999999999999998765 678899999999999


Q ss_pred             hhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecCCCCcceeee
Q 005257          449 LDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTR  528 (705)
Q Consensus       449 L~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~~~~~~~~~~  528 (705)
                      |.+++....   .+++..+..++.|++.||.|||+   .+++|+||+|+||+++.++.++|+|||++........ ....
T Consensus        80 L~~~l~~~~---~l~~~~~~~~~~qi~~~l~~lh~---~~~~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~~-~~~~  152 (250)
T cd05123          80 LFSHLSKEG---RFSEERARFYAAEIVLALEYLHS---LGIIYRDLKPENILLDADGHIKLTDFGLAKELSSEGS-RTNT  152 (250)
T ss_pred             HHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHH---CCceecCCCcceEEEcCCCcEEEeecCcceecccCCC-cccC
Confidence            999997543   58999999999999999999998   9999999999999999999999999999987644321 2233


Q ss_pred             eeccccCCCccccccCCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhHHHHHhhhcCCCCCHHHH
Q 005257          529 VVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRAKGGFDEDEV  608 (705)
Q Consensus       529 ~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~l~~~~~~~~~~~  608 (705)
                      ..++..|+|||.+.+...+.++|+||||+++|||++|+.||.....   .........+            ...++....
T Consensus       153 ~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~---~~~~~~~~~~------------~~~~~~~~~  217 (250)
T cd05123         153 FCGTPEYLAPEVLLGKGYGKAVDWWSLGVLLYEMLTGKPPFYAEDR---KEIYEKILKD------------PLRFPEFLS  217 (250)
T ss_pred             CcCCccccChHHhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCH---HHHHHHHhcC------------CCCCCCCCC
Confidence            5678899999999888889999999999999999999999975432   1111111111            122233335


Q ss_pred             HHHHHHHHHcCCCCCCCCCCHHH
Q 005257          609 ERVLHLGLLCAYPDPRARPTMRQ  631 (705)
Q Consensus       609 ~~l~~l~~~Cl~~dP~~RPs~~e  631 (705)
                      ..+.+++..||..||++||++.+
T Consensus       218 ~~l~~~i~~~l~~~p~~R~~~~~  240 (250)
T cd05123         218 PEARDLISGLLQKDPTKRLGSGG  240 (250)
T ss_pred             HHHHHHHHHHhcCCHhhCCCccc
Confidence            67889999999999999999954

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the

>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=8.3e-34  Score=282.83  Aligned_cols=249  Identities=25%  Similarity=0.356  Sum_probs=201.4

Q ss_pred             hCCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccC---CchhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEE
Q 005257          363 TKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHE---NDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLML  439 (705)
Q Consensus       363 t~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~---~~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~l  439 (705)
                      .++|...++||+|.||+|.+++-+.+++.+|+|+++++   .+.....-+.|-++|+..+||.+..+.-.+.. .+++|+
T Consensus       167 m~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKYsFQt-~drlCF  245 (516)
T KOG0690|consen  167 MEDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKYSFQT-QDRLCF  245 (516)
T ss_pred             cchhhHHHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhhhhcc-CceEEE
Confidence            45788899999999999999999999999999999876   33445566889999999999999888766665 789999


Q ss_pred             EEeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecC
Q 005257          440 VYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHG  519 (705)
Q Consensus       440 V~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~  519 (705)
                      ||||..||.|.-+|.+.+   .+++....-+-..|..||.|||+   ++||.||||.+|.|||.+|++||.||||++.--
T Consensus       246 VMeyanGGeLf~HLsrer---~FsE~RtRFYGaEIvsAL~YLHs---~~ivYRDlKLENLlLDkDGHIKitDFGLCKE~I  319 (516)
T KOG0690|consen  246 VMEYANGGELFFHLSRER---VFSEDRTRFYGAEIVSALGYLHS---RNIVYRDLKLENLLLDKDGHIKITDFGLCKEEI  319 (516)
T ss_pred             EEEEccCceEeeehhhhh---cccchhhhhhhHHHHHHhhhhhh---CCeeeeechhhhheeccCCceEeeecccchhcc
Confidence            999999999999886543   68888888899999999999999   999999999999999999999999999997532


Q ss_pred             CCCcceeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhHHHHHhhhc
Q 005257          520 HGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRA  599 (705)
Q Consensus       520 ~~~~~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~l~~  599 (705)
                      . ....+..++|||.|+|||++....|...+|.|.+|||+|||+||+.||...+..   .+.+++..+        .+  
T Consensus       320 ~-~g~t~kTFCGTPEYLAPEVleDnDYgraVDWWG~GVVMYEMmCGRLPFyn~dh~---kLFeLIl~e--------d~--  385 (516)
T KOG0690|consen  320 K-YGDTTKTFCGTPEYLAPEVLEDNDYGRAVDWWGVGVVMYEMMCGRLPFYNKDHE---KLFELILME--------DL--  385 (516)
T ss_pred             c-ccceeccccCChhhcCchhhccccccceeehhhhhHHHHHHHhccCcccccchh---HHHHHHHhh--------hc--
Confidence            2 223455689999999999999999999999999999999999999999875432   222222211        11  


Q ss_pred             CCCCCHHHHHHHHHHHHHcCCCCCCCCC-----CHHHHHH
Q 005257          600 KGGFDEDEVERVLHLGLLCAYPDPRARP-----TMRQVVK  634 (705)
Q Consensus       600 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RP-----s~~evl~  634 (705)
                        .++.....+...|..-.+..||.+|-     .++||.+
T Consensus       386 --kFPr~ls~eAktLLsGLL~kdP~kRLGgGpdDakEi~~  423 (516)
T KOG0690|consen  386 --KFPRTLSPEAKTLLSGLLKKDPKKRLGGGPDDAKEIMR  423 (516)
T ss_pred             --cCCccCCHHHHHHHHHHhhcChHhhcCCCchhHHHHHh
Confidence              12333334455566667888999994     4555544

>PTZ00024 cyclin-dependent protein kinase; Provisional

Probab=100.00  E-value=8.6e-33  Score=297.42  Aligned_cols=265  Identities=21%  Similarity=0.277  Sum_probs=196.5

Q ss_pred             CCCCc-ceEEeecCceEEEEEEEcCCCeEEEEEEeccCCchh--------------HHHHHHHHHHhccCCCCCcceeee
Q 005257          364 KGFSE-ENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGG--------------TRAFLAEISSLGRLKHKSLVGLRG  428 (705)
Q Consensus       364 ~~f~~-~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~~~--------------~~~~~~Ei~~l~~l~Hpniv~l~g  428 (705)
                      ++|.. .+.||+|+||.||+|.+..+++.||||+++......              ...+.+|++++++++||||+++++
T Consensus         8 ~ry~~~~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~   87 (335)
T PTZ00024          8 ERYIQKGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMGLVD   87 (335)
T ss_pred             cchhhhhhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceeeeeE
Confidence            45543 567999999999999998889999999986542211              125788999999999999999999


Q ss_pred             eeeeccCceEEEEeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCee
Q 005257          429 WCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGR  508 (705)
Q Consensus       429 ~~~~~~~~~~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~k  508 (705)
                      ++.. ++..++||||++ |+|.+++...   ..+++.....++.|++.||.|||+   .+++|+||||+||+++.++.+|
T Consensus        88 ~~~~-~~~~~lv~e~~~-~~l~~~l~~~---~~~~~~~~~~~~~ql~~aL~~LH~---~~i~H~dl~~~nill~~~~~~k  159 (335)
T PTZ00024         88 VYVE-GDFINLVMDIMA-SDLKKVVDRK---IRLTESQVKCILLQILNGLNVLHK---WYFMHRDLSPANIFINSKGICK  159 (335)
T ss_pred             EEec-CCcEEEEEeccc-cCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHh---CCeecccccHHHeEECCCCCEE
Confidence            8876 678899999997 6899888643   258999999999999999999998   9999999999999999999999


Q ss_pred             eeeeccceecCCCC-------------cceeeeeeccccCCCccccccC-CCCccccEEEEehhHHHHhhCCCCCCCCCc
Q 005257          509 LGDFGLARMHGHGQ-------------VASTTRVVGTVGYLAPEVFSSG-RASTQTDVFGFGILILEVLSGRRPIEEGKP  574 (705)
Q Consensus       509 L~DFGla~~~~~~~-------------~~~~~~~~gt~~y~APE~~~~~-~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~  574 (705)
                      |+|||+++......             ........++..|+|||.+.+. .++.++|||||||++|||++|+.||.....
T Consensus       160 l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~  239 (335)
T PTZ00024        160 IADFGLARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTGKPLFPGENE  239 (335)
T ss_pred             ECCccceeecccccccccccccccccccccccccccccCCCCChhcccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCH
Confidence            99999998664111             1111223568899999998764 468999999999999999999999976543


Q ss_pred             c-HHHHHHHHHHhCc---hhHHHHHh-hhc-CC-------CCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Q 005257          575 N-LVEMVWELMVQGK---LLDALDAR-LRA-KG-------GFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVL  636 (705)
Q Consensus       575 ~-~~~~v~~~~~~~~---~~~~id~~-l~~-~~-------~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L  636 (705)
                      . ....+........   ..+..+.. ... ..       .........+.+++..||+.+|++||++.|++.+-
T Consensus       240 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~~~  314 (335)
T PTZ00024        240 IDQLGRIFELLGTPNEDNWPQAKKLPLYTEFTPRKPKDLKTIFPNASDDAIDLLQSLLKLNPLERISAKEALKHE  314 (335)
T ss_pred             HHHHHHHHHHhCCCchhhCcchhhcccccccCcCCcccHHHhCcCCChHHHHHHHHHcCCCchhccCHHHHhcCc
Confidence            1 1111111111100   00000000 000 00       00011235678999999999999999999998743

>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

Probab=100.00  E-value=1.4e-32  Score=287.30  Aligned_cols=260  Identities=25%  Similarity=0.370  Sum_probs=199.9

Q ss_pred             CCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCC--chhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEEEEee
Q 005257          366 FSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHEN--DGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDY  443 (705)
Q Consensus       366 f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~--~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~lV~E~  443 (705)
                      |+..+.||+|++|.||+|+...+++.+|+|.+....  ....+.+..|+.++++++|+|++++++++.. .+..++|+||
T Consensus         1 y~~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~-~~~~~~v~e~   79 (282)
T cd07829           1 YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKELKHPNIVKLLDVIHT-ERKLYLVFEY   79 (282)
T ss_pred             CeeehcccccCcceEEEeeecCCCcEEEEEEeccccccccccHHHHHHHHHHHhcCCCCHHHHHhhhhc-CCceEEEecC
Confidence            456778999999999999999889999999987653  3345678899999999999999999998876 5789999999


Q ss_pred             CCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecCCCCc
Q 005257          444 MENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQV  523 (705)
Q Consensus       444 ~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~~~~~  523 (705)
                      ++ ++|.+++.+..  ..+++.++..++.|++.||.|||+   .+++||||+|+||++++++.+||+|||+++.......
T Consensus        80 ~~-~~l~~~i~~~~--~~~~~~~~~~~~~~i~~~l~~LH~---~~i~H~~l~~~ni~~~~~~~~~l~d~g~~~~~~~~~~  153 (282)
T cd07829          80 CD-MDLKKYLDKRP--GPLSPNLIKSIMYQLLRGLAYCHS---HRILHRDLKPQNILINRDGVLKLADFGLARAFGIPLR  153 (282)
T ss_pred             cC-cCHHHHHHhhc--cCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCChheEEEcCCCCEEEecCCcccccCCCcc
Confidence            97 59999997653  258999999999999999999998   9999999999999999999999999999987654332


Q ss_pred             ceeeeeeccccCCCccccccC-CCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHh-CchhHH---------
Q 005257          524 ASTTRVVGTVGYLAPEVFSSG-RASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQ-GKLLDA---------  592 (705)
Q Consensus       524 ~~~~~~~gt~~y~APE~~~~~-~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~-~~~~~~---------  592 (705)
                      . .....++..|+|||.+.+. .++.++|||||||++|||++|+.||.....  .+........ +...+.         
T Consensus       154 ~-~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (282)
T cd07829         154 T-YTHEVVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDSE--IDQLFKIFQILGTPTEESWPGVTKLP  230 (282)
T ss_pred             c-cCccccCcCcCChHHhcCCcCCCccccHHHHHHHHHHHHhCCCCCCCccH--HHHHHHHHHHhCCCcHHHHHhhcccc
Confidence            1 2223457889999998776 789999999999999999999999976432  1111111100 000000         


Q ss_pred             -HHHhhhcCC-----CCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 005257          593 -LDARLRAKG-----GFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKV  635 (705)
Q Consensus       593 -id~~l~~~~-----~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  635 (705)
                       .+.......     ...+.....+.+++..||..+|++||++.+++..
T Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~  279 (282)
T cd07829         231 DYKPTFPKFPPKDLEKVLPRLDPEGIDLLSKMLQYNPAKRISAKEALKH  279 (282)
T ss_pred             cccccccccCccchHHhcccccHHHHHHHHHhhccCcccCCCHHHHhhC
Confidence             000000000     0001124568999999999999999999998863

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the

>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]

Probab=100.00  E-value=3.4e-33  Score=292.99  Aligned_cols=197  Identities=29%  Similarity=0.463  Sum_probs=170.7

Q ss_pred             ceEEeecCceEEEEEEEcCCCeEEEEEEeccCC--chhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEEEEeeCCC
Q 005257          369 ENVIGVGGNGKVYKGVLEGGGAEIAVKRISHEN--DGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMEN  446 (705)
Q Consensus       369 ~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~--~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~lV~E~~~~  446 (705)
                      .++||.|.||+||-|+++.+|+.||||++.+..  ..+...+.+|+.+|+.++||.||.+.-.|.. .++.+.|||-+.|
T Consensus       569 devLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~HPGiV~le~M~ET-~ervFVVMEKl~G  647 (888)
T KOG4236|consen  569 DEVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLHHPGIVNLECMFET-PERVFVVMEKLHG  647 (888)
T ss_pred             HhhccCCcceeeecceecccCceeeeeeeecccCCCchHHHHHHHHHHHHhcCCCCeeEEEEeecC-CceEEEEehhhcc
Confidence            578999999999999999999999999998763  3445778999999999999999999887765 7789999999965


Q ss_pred             CChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccC---CCeeeeeeccceecCCCCc
Q 005257          447 GSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKE---MNGRLGDFGLARMHGHGQV  523 (705)
Q Consensus       447 gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~---~~~kL~DFGla~~~~~~~~  523 (705)
                      .-|.-.|...++  +|++..-.-++.||+.||.|||.   ++|+|+||||+||||.+.   -.+||||||.||.+++...
T Consensus       648 DMLEMILSsEkg--RL~er~TkFlvtQIL~ALr~LH~---knIvHCDLKPENVLLas~~~FPQvKlCDFGfARiIgEksF  722 (888)
T KOG4236|consen  648 DMLEMILSSEKG--RLPERITKFLVTQILVALRYLHF---KNIVHCDLKPENVLLASASPFPQVKLCDFGFARIIGEKSF  722 (888)
T ss_pred             hHHHHHHHhhcc--cchHHHHHHHHHHHHHHHHHhhh---cceeeccCCchheeeccCCCCCceeeccccceeecchhhh
Confidence            444444444333  69998888999999999999998   999999999999999754   3689999999999876544


Q ss_pred             ceeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhhCCCCCCCCC
Q 005257          524 ASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGK  573 (705)
Q Consensus       524 ~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~  573 (705)
                      .  ..++||+.|+|||++.+..|...-|+||.||++|--++|..||..+.
T Consensus       723 R--rsVVGTPAYLaPEVLrnkGyNrSLDMWSVGVIiYVsLSGTFPFNEdE  770 (888)
T KOG4236|consen  723 R--RSVVGTPAYLAPEVLRNKGYNRSLDMWSVGVIIYVSLSGTFPFNEDE  770 (888)
T ss_pred             h--hhhcCCccccCHHHHhhccccccccceeeeEEEEEEecccccCCCcc
Confidence            3  34799999999999999999999999999999999999999998653

>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=1.3e-33  Score=299.10  Aligned_cols=251  Identities=23%  Similarity=0.347  Sum_probs=194.7

Q ss_pred             CCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccC--CchhHHHHHHHHHHhccCC-CCCcceeeeeeeeccCceEEE
Q 005257          364 KGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHE--NDGGTRAFLAEISSLGRLK-HKSLVGLRGWCKREKGSLMLV  440 (705)
Q Consensus       364 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~--~~~~~~~~~~Ei~~l~~l~-Hpniv~l~g~~~~~~~~~~lV  440 (705)
                      ..|++.++||+||.+.||++...+. ..+|+|++...  +.+...-|..|+..|.+|+ |.+|+++++|-.. ++.+|+|
T Consensus       361 ~~Yeilk~iG~GGSSkV~kV~~s~~-~iyalkkv~~~~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~-d~~lYmv  438 (677)
T KOG0596|consen  361 REYEILKQIGSGGSSKVFKVLNSDK-QIYALKKVVLLEADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVT-DGYLYMV  438 (677)
T ss_pred             chhhHHHhhcCCCcceeeeeecCCC-cchhhhHHHHhhcCHHHHHHHHHHHHHHHHhcCCceEEEEeeeecc-CceEEEE
Confidence            4688899999999999999988654 55777766443  4456778999999999995 9999999998776 7899999


Q ss_pred             EeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecCC
Q 005257          441 YDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGH  520 (705)
Q Consensus       441 ~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~~  520 (705)
                      |||=+ .+|..+|.+.... ...| .+..+..||+.|+.++|.   .+|||.||||.|+|+-. |.+||+|||+|..+..
T Consensus       439 mE~Gd-~DL~kiL~k~~~~-~~~~-~lk~ywkqML~aV~~IH~---~gIVHSDLKPANFLlVk-G~LKLIDFGIA~aI~~  511 (677)
T KOG0596|consen  439 MECGD-IDLNKILKKKKSI-DPDW-FLKFYWKQMLLAVKTIHQ---HGIVHSDLKPANFLLVK-GRLKLIDFGIANAIQP  511 (677)
T ss_pred             eeccc-ccHHHHHHhccCC-CchH-HHHHHHHHHHHHHHHHHH---hceeecCCCcccEEEEe-eeEEeeeechhcccCc
Confidence            99974 5999999875543 2334 788999999999999998   99999999999999964 6899999999988766


Q ss_pred             CCcce-eeeeeccccCCCccccccC-----------CCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCc
Q 005257          521 GQVAS-TTRVVGTVGYLAPEVFSSG-----------RASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGK  588 (705)
Q Consensus       521 ~~~~~-~~~~~gt~~y~APE~~~~~-----------~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~  588 (705)
                      +.... ....+||+.||+||.+...           +.+.++||||+||+||+|+.|+.||.....     +|.     +
T Consensus       512 DTTsI~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~~~n-----~~a-----K  581 (677)
T KOG0596|consen  512 DTTSIVKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQIIN-----QIA-----K  581 (677)
T ss_pred             cccceeeccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchHHHHH-----HHH-----H
Confidence            54332 3346999999999998432           357899999999999999999999975321     111     1


Q ss_pred             hhHHHHHhhhcCCCCCH-HHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 005257          589 LLDALDARLRAKGGFDE-DEVERVLHLGLLCAYPDPRARPTMRQVVKV  635 (705)
Q Consensus       589 ~~~~id~~l~~~~~~~~-~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  635 (705)
                      +....++...  -+|+. .....+.+++..||+.||.+||+..+++++
T Consensus       582 l~aI~~P~~~--Iefp~~~~~~~li~~mK~CL~rdPkkR~si~eLLqh  627 (677)
T KOG0596|consen  582 LHAITDPNHE--IEFPDIPENDELIDVMKCCLARDPKKRWSIPELLQH  627 (677)
T ss_pred             HHhhcCCCcc--ccccCCCCchHHHHHHHHHHhcCcccCCCcHHHhcC
Confidence            2222333211  01111 111238999999999999999999999874

>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

Probab=100.00  E-value=9.9e-33  Score=298.15  Aligned_cols=260  Identities=21%  Similarity=0.331  Sum_probs=199.2

Q ss_pred             HhCCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccC--CchhHHHHHHHHHHhccCCCCCcceeeeeeeecc-----
Q 005257          362 ATKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHE--NDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREK-----  434 (705)
Q Consensus       362 at~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~--~~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~-----  434 (705)
                      ..++|...+.||+|++|.||+|.+..+++.||||++...  .....+.+.+|+.+++.++|||++++.+++...+     
T Consensus        13 ~~~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~   92 (343)
T cd07851          13 VPDRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMDHENVIGLLDVFTPASSLEDF   92 (343)
T ss_pred             ccCceEEEEEeccCCceEEEEEEECCCCcEEEEEecccccchhhHHHHHHHHHHHHHhccCCCHHHHHHHhhcccccccc
Confidence            467899999999999999999999988999999998653  2234466788999999999999999998765422     


Q ss_pred             CceEEEEeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeecc
Q 005257          435 GSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGL  514 (705)
Q Consensus       435 ~~~~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGl  514 (705)
                      ...++|+||+ +++|.+++..    ..+++.++..++.|++.||.|||+   .+++||||||+||++++++.+||+|||+
T Consensus        93 ~~~~lv~e~~-~~~L~~~~~~----~~l~~~~~~~~~~ql~~aL~~LH~---~gi~H~dlkp~Nill~~~~~~kL~dfg~  164 (343)
T cd07851          93 QDVYLVTHLM-GADLNNIVKC----QKLSDDHIQFLVYQILRGLKYIHS---AGIIHRDLKPSNIAVNEDCELKILDFGL  164 (343)
T ss_pred             ccEEEEEecC-CCCHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHeEECCCCCEEEccccc
Confidence            2489999999 5699998854    268999999999999999999998   9999999999999999999999999999


Q ss_pred             ceecCCCCcceeeeeeccccCCCcccccc-CCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHH-hCchhHH
Q 005257          515 ARMHGHGQVASTTRVVGTVGYLAPEVFSS-GRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMV-QGKLLDA  592 (705)
Q Consensus       515 a~~~~~~~~~~~~~~~gt~~y~APE~~~~-~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~-~~~~~~~  592 (705)
                      +......    .....++..|+|||.+.+ ..++.++|||||||++|||++|+.||.....  .+.+..... .+...+.
T Consensus       165 ~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg~~pf~~~~~--~~~~~~i~~~~~~~~~~  238 (343)
T cd07851         165 ARHTDDE----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPGSDH--IDQLKRIMNLVGTPDEE  238 (343)
T ss_pred             ccccccc----ccCCcccccccCHHHHhCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCh--HHHHHHHHHhcCCCCHH
Confidence            9865432    223467889999999865 3678999999999999999999999975432  111111110 0100111


Q ss_pred             HHHhh------------hcC--CCCC---HHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 005257          593 LDARL------------RAK--GGFD---EDEVERVLHLGLLCAYPDPRARPTMRQVVKV  635 (705)
Q Consensus       593 id~~l------------~~~--~~~~---~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  635 (705)
                      +..++            ...  ..+.   ......+.+++..|++++|++|||+.+++++
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~dli~~~l~~~P~~Rpt~~ell~h  298 (343)
T cd07851         239 LLQKISSESARNYIQSLPQMPKKDFKEVFSGANPLAIDLLEKMLVLDPDKRITAAEALAH  298 (343)
T ss_pred             HHhhccchhHHHHHHhccccCCCCHHHHhccCCHHHHHHHHHhCCCChhhCCCHHHHhcC
Confidence            10000            000  0000   0124578899999999999999999999874

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK

>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

Probab=100.00  E-value=3.3e-32  Score=292.67  Aligned_cols=262  Identities=22%  Similarity=0.250  Sum_probs=194.3

Q ss_pred             CCCcceEEeecCceEEEEEEEcCC--CeEEEEEEeccC--CchhHHHHHHHHHHhccC-CCCCcceeeeeeeec---cCc
Q 005257          365 GFSEENVIGVGGNGKVYKGVLEGG--GAEIAVKRISHE--NDGGTRAFLAEISSLGRL-KHKSLVGLRGWCKRE---KGS  436 (705)
Q Consensus       365 ~f~~~~~LG~G~fg~Vy~~~~~~~--~~~vavK~i~~~--~~~~~~~~~~Ei~~l~~l-~Hpniv~l~g~~~~~---~~~  436 (705)
                      +|...+.||+|+||.||++.....  +..||+|++...  .....+.+.+|+.++.++ +||||+++++.+...   ...
T Consensus         1 ~y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~~~   80 (332)
T cd07857           1 RYELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGNFNE   80 (332)
T ss_pred             CceEEEEccccCCeEEEEEEeCCCCcCceEEEEEeccccccchhHHHHHHHHHHHHHhcCCCChheeeeeeeeccccCCc
Confidence            477789999999999999999877  889999998653  222356788999999999 599999999865421   235


Q ss_pred             eEEEEeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccce
Q 005257          437 LMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLAR  516 (705)
Q Consensus       437 ~~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~  516 (705)
                      .++++||+. ++|.+++...   ..+++..+..++.|++.||.|||+   .+++||||||+|||++.++.+||+|||+++
T Consensus        81 ~~~~~e~~~-~~L~~~l~~~---~~~~~~~~~~~~~qi~~aL~~LH~---~givH~dlkp~Nili~~~~~~kl~Dfg~a~  153 (332)
T cd07857          81 LYLYEELME-ADLHQIIRSG---QPLTDAHFQSFIYQILCGLKYIHS---ANVLHRDLKPGNLLVNADCELKICDFGLAR  153 (332)
T ss_pred             EEEEEeccc-CCHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCHHHeEEcCCCCEEeCcCCCce
Confidence            788899986 6899888643   268999999999999999999998   999999999999999999999999999998


Q ss_pred             ecCCCCcc---eeeeeeccccCCCcccccc-CCCCccccEEEEehhHHHHhhCCCCCCCCCcc-HHHHHHHH--------
Q 005257          517 MHGHGQVA---STTRVVGTVGYLAPEVFSS-GRASTQTDVFGFGILILEVLSGRRPIEEGKPN-LVEMVWEL--------  583 (705)
Q Consensus       517 ~~~~~~~~---~~~~~~gt~~y~APE~~~~-~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~-~~~~v~~~--------  583 (705)
                      ........   ......|+..|+|||.+.+ ..++.++||||+||++|||++|+.||...... ........        
T Consensus       154 ~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~  233 (332)
T cd07857         154 GFSENPGENAGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFKGKDYVDQLNQILQVLGTPDEET  233 (332)
T ss_pred             ecccccccccccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHHHHHHhCCcCCCCCCHHHHHHHHHHHhCCCCHHH
Confidence            65432211   1223578999999998765 46899999999999999999999999764321 11111000        


Q ss_pred             ---HHhCchhHHHHHhhhcCCCC-----CHHHHHHHHHHHHHcCCCCCCCCCCHHHHHH
Q 005257          584 ---MVQGKLLDALDARLRAKGGF-----DEDEVERVLHLGLLCAYPDPRARPTMRQVVK  634 (705)
Q Consensus       584 ---~~~~~~~~~id~~l~~~~~~-----~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~  634 (705)
                         +........+. ........     .......+.+++.+|++.||++||++.++++
T Consensus       234 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~ll~  291 (332)
T cd07857         234 LSRIGSPKAQNYIR-SLPNIPKKPFESIFPNANPLALDLLEKLLAFDPTKRISVEEALE  291 (332)
T ss_pred             HHhhhhhhHHHHHH-hccccCCcchHhhCCCCCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence               00000000000 00000000     0112356889999999999999999999865

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co

>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]

Probab=99.98  E-value=2.7e-33  Score=317.28  Aligned_cols=210  Identities=27%  Similarity=0.339  Sum_probs=187.5

Q ss_pred             HHHHHHHhCCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccC---CchhHHHHHHHHHHhccCCCCCcceeeeeeee
Q 005257          356 YQEIEAATKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHE---NDGGTRAFLAEISSLGRLKHKSLVGLRGWCKR  432 (705)
Q Consensus       356 ~~el~~at~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~---~~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~  432 (705)
                      ..+++...++|.+.++||+|+||.|..++++.+++.+|+|++++.   .......|..|-.+|..-..+-|++++-.+.+
T Consensus        67 v~~lrl~~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyAFQD  146 (1317)
T KOG0612|consen   67 VKELRLKAEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLHYAFQD  146 (1317)
T ss_pred             HHHHhCCHHhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHHHHhcC
Confidence            456677778999999999999999999999999999999999773   34556778999999998888999999877766


Q ss_pred             ccCceEEEEeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeee
Q 005257          433 EKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDF  512 (705)
Q Consensus       433 ~~~~~~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DF  512 (705)
                       ..++|+|||||+||+|-.++.+..   +++++.++-++..|..||.-||+   .|+|||||||.|||||..|++||+||
T Consensus       147 -~~~LYlVMdY~pGGDlltLlSk~~---~~pE~~ArFY~aEiVlAldslH~---mgyVHRDiKPDNvLld~~GHikLADF  219 (1317)
T KOG0612|consen  147 -ERYLYLVMDYMPGGDLLTLLSKFD---RLPEDWARFYTAEIVLALDSLHS---MGYVHRDIKPDNVLLDKSGHIKLADF  219 (1317)
T ss_pred             -ccceEEEEecccCchHHHHHhhcC---CChHHHHHHHHHHHHHHHHHHHh---ccceeccCCcceeEecccCcEeeccc
Confidence             779999999999999999997655   69999999999999999999998   99999999999999999999999999


Q ss_pred             ccceecCCCCcceeeeeeccccCCCcccccc-----CCCCccccEEEEehhHHHHhhCCCCCCCC
Q 005257          513 GLARMHGHGQVASTTRVVGTVGYLAPEVFSS-----GRASTQTDVFGFGILILEVLSGRRPIEEG  572 (705)
Q Consensus       513 Gla~~~~~~~~~~~~~~~gt~~y~APE~~~~-----~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~  572 (705)
                      |.|-.+..+..-.....+|||.|++||++..     +.|...+|.||+||++|||+.|..||..+
T Consensus       220 GsClkm~~dG~V~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFYad  284 (1317)
T KOG0612|consen  220 GSCLKMDADGTVRSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFYAD  284 (1317)
T ss_pred             hhHHhcCCCCcEEeccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcchHH
Confidence            9998777655555566799999999999853     57899999999999999999999999763

>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]

Probab=99.98  E-value=2e-33  Score=268.36  Aligned_cols=293  Identities=18%  Similarity=0.277  Sum_probs=213.7

Q ss_pred             hCCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCCchhHHHHHHHHHHhccCC-CCCcceeeeeeeecc-CceEEE
Q 005257          363 TKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLK-HKSLVGLRGWCKREK-GSLMLV  440 (705)
Q Consensus       363 t~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~~~~~~~~~Ei~~l~~l~-Hpniv~l~g~~~~~~-~~~~lV  440 (705)
                      .++|++.+++|+|.++.||.|....+++.++||.++..   ..+.+.+|+++|..|+ ||||+++++...+.. ....||
T Consensus        37 ~ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKPV---kkkKIkREikIL~nL~gg~NIi~L~DiV~Dp~SktpaLi  113 (338)
T KOG0668|consen   37 QDDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILKPV---KKKKIKREIKILQNLRGGPNIIKLLDIVKDPESKTPSLI  113 (338)
T ss_pred             cchHHHHHHHcCccHhhHhcccccCCCceEEEeeechH---HHHHHHHHHHHHHhccCCCCeeehhhhhcCccccCchhH
Confidence            45788889999999999999998888999999999654   3477899999999997 999999999886432 356899


Q ss_pred             EeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccC-CCeeeeeeccceecC
Q 005257          441 YDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKE-MNGRLGDFGLARMHG  519 (705)
Q Consensus       441 ~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~-~~~kL~DFGla~~~~  519 (705)
                      +||+.+.+...+..      .|+..++..++.++++||.|||+   +||+|||+||.|++||.. -.++|+|+|||..+.
T Consensus       114 FE~v~n~Dfk~ly~------tl~d~dIryY~~elLkALdyCHS---~GImHRDVKPhNvmIdh~~rkLrlIDWGLAEFYH  184 (338)
T KOG0668|consen  114 FEYVNNTDFKQLYP------TLTDYDIRYYIYELLKALDYCHS---MGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYH  184 (338)
T ss_pred             hhhhccccHHHHhh------hhchhhHHHHHHHHHHHHhHHHh---cCcccccCCcceeeechhhceeeeeecchHhhcC
Confidence            99999988876652      58888999999999999999999   999999999999999964 569999999999887


Q ss_pred             CCCcceeeeeeccccCCCcccccc-CCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCc--hhHHHHHh
Q 005257          520 HGQVASTTRVVGTVGYLAPEVFSS-GRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGK--LLDALDAR  596 (705)
Q Consensus       520 ~~~~~~~~~~~gt~~y~APE~~~~-~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~--~~~~id~~  596 (705)
                      ++.....  .+.+..|.-||.+.. ..|+..-|+|||||+|.+|+..+.||..+..+..+.|...-.-|.  +..-+.+ 
T Consensus       185 p~~eYnV--RVASRyfKGPELLVdy~~YDYSLD~WS~GcmlA~miFrkepFFhG~dN~DQLVkIakVLGt~el~~Yl~K-  261 (338)
T KOG0668|consen  185 PGKEYNV--RVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVKIAKVLGTDELYAYLNK-  261 (338)
T ss_pred             CCceeee--eeehhhcCCchheeechhccccHHHHHHHHHHHHHHhccCcccCCCCCHHHHHHHHHHhChHHHHHHHHH-
Confidence            6654332  356888999999865 568999999999999999999999998877665555433322221  1111110 


Q ss_pred             hhcCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHhccccCCCCCcchhhHHHHHHhhccccccccccccccCC
Q 005257          597 LRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLEGKIEAGIENETEDMDAYLLQQVKSKDMWANYSRSFGYGY  676 (705)
Q Consensus       597 l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~  676 (705)
                      ..  -..++    ++-.++.         |-+-+..-.++....+...       ....++++.....++++.|.++++|
T Consensus       262 Y~--i~Ldp----~~~~i~~---------~~~rk~w~~Fi~~~n~hl~-------~peaiDlldklLrYDHqeRlTakEa  319 (338)
T KOG0668|consen  262 YQ--IDLDP----QFEDILG---------RHSRKPWSRFINSENQHLV-------SPEAIDLLDKLLRYDHQERLTAKEA  319 (338)
T ss_pred             Hc--cCCCh----hHhhHhh---------ccccccHHHhCCccccccC-------ChHHHHHHHHHHhhccccccchHHH
Confidence            00  00111    1111111         1111111222222222111       1223445555556999999999999


Q ss_pred             CCCCCccccccccccc
Q 005257          677 ATHPTFHDIRQSNSYS  692 (705)
Q Consensus       677 ~~hp~f~~~~~~~~~~  692 (705)
                      +.||||.+++...+..
T Consensus       320 m~HpyF~~~~~~~~~~  335 (338)
T KOG0668|consen  320 MAHPYFAPVREAESSR  335 (338)
T ss_pred             hcCchHHHHHHHhhcc
Confidence            9999999998776654

>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

Probab=99.98  E-value=3.8e-32  Score=317.17  Aligned_cols=146  Identities=27%  Similarity=0.394  Sum_probs=131.2

Q ss_pred             CCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCC---chhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEEE
Q 005257          364 KGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHEN---DGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLV  440 (705)
Q Consensus       364 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~---~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~lV  440 (705)
                      ++|.+.++||+|+||.||+|.+..+++.||||+++...   ......+.+|+.++..++||||+++++++.. ...+++|
T Consensus         4 ~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~-~~~~~lV   82 (669)
T cd05610           4 EEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSLQS-ANNVYLV   82 (669)
T ss_pred             CCEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEEE-CCEEEEE
Confidence            57888999999999999999999889999999986542   2334678899999999999999999987765 6789999


Q ss_pred             EeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccce
Q 005257          441 YDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLAR  516 (705)
Q Consensus       441 ~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~  516 (705)
                      |||+++++|.+++....   .+++..++.++.||+.||.|||.   .+|+||||||+|||++.++.+||+|||+++
T Consensus        83 mEy~~g~~L~~li~~~~---~l~~~~~~~i~~qil~aL~yLH~---~gIiHrDLKP~NILl~~~g~vkL~DFGls~  152 (669)
T cd05610          83 MEYLIGGDVKSLLHIYG---YFDEEMAVKYISEVALALDYLHR---HGIIHRDLKPDNMLISNEGHIKLTDFGLSK  152 (669)
T ss_pred             EeCCCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHh---CCEEeCCccHHHEEEcCCCCEEEEeCCCCc
Confidence            99999999999996543   58899999999999999999998   899999999999999999999999999986

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481

>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]

Probab=99.97  E-value=7.6e-32  Score=299.42  Aligned_cols=263  Identities=24%  Similarity=0.352  Sum_probs=214.7

Q ss_pred             CHHHHHHHhCCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCCchhHHHHHHHHHHhccC-CCCCcceeeeeeee-
Q 005257          355 TYQEIEAATKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRL-KHKSLVGLRGWCKR-  432 (705)
Q Consensus       355 ~~~el~~at~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~~~~~~~~~Ei~~l~~l-~Hpniv~l~g~~~~-  432 (705)
                      .++.+...++.|.+.+.||.|.+|.||+++...+++.+|+|+.... ....+++..|.++++.+ .|||++.++|++.. 
T Consensus        10 ~~~~lpdp~d~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~-~d~deEiE~eynil~~~~~hpnv~~fyg~~~k~   88 (953)
T KOG0587|consen   10 DLSSLPDPADIFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPT-EDEEEEIELEYNMLKKYSHHPNVATFYGAFIKK   88 (953)
T ss_pred             chhhCCCCCCccEEEEEEeeccceeEEEEeeeecCceeeeEeecCC-ccccHHHHHHHHHHHhccCCCCcceEEEEEEEe
Confidence            4445555677899999999999999999999999999999987554 33456788899999998 69999999998863 


Q ss_pred             ---ccCceEEEEeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeee
Q 005257          433 ---EKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRL  509 (705)
Q Consensus       433 ---~~~~~~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL  509 (705)
                         .++.+|||||||.+||..++++... ...+.|..+..|++.++.||.+||.   ..++|||||-.|||++.++.+||
T Consensus        89 ~~~~~DqLWLVMEfC~gGSVTDLVKn~~-g~rl~E~~IaYI~re~lrgl~HLH~---nkviHRDikG~NiLLT~e~~VKL  164 (953)
T KOG0587|consen   89 DPGNGDQLWLVMEFCGGGSVTDLVKNTK-GNRLKEEWIAYILREILRGLAHLHN---NKVIHRDIKGQNVLLTENAEVKL  164 (953)
T ss_pred             cCCCCCeEEEEeeccCCccHHHHHhhhc-ccchhhHHHHHHHHHHHHHHHHHhh---cceeeecccCceEEEeccCcEEE
Confidence               2458999999999999999998776 4489999999999999999999998   99999999999999999999999


Q ss_pred             eeeccceecCCCCcceeeeeeccccCCCcccccc-----CCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHH
Q 005257          510 GDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSS-----GRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELM  584 (705)
Q Consensus       510 ~DFGla~~~~~~~~~~~~~~~gt~~y~APE~~~~-----~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~  584 (705)
                      +|||++........ .....+||+.|||||++.-     ..|+.++|+||||++..||.-|.+|+.+..+..     .+.
T Consensus       165 vDFGvSaQldsT~g-rRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~PPl~DmHPmr-----aLF  238 (953)
T KOG0587|consen  165 VDFGVSAQLDSTVG-RRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGAPPLCDMHPMR-----ALF  238 (953)
T ss_pred             eeeeeeeeeecccc-cccCcCCCcccccceeeecccCCCCCcccccchhhccceeehhcCCCCCccCcchhh-----hhc
Confidence            99999987654332 2334689999999999854     357889999999999999999999997755410     000


Q ss_pred             HhCchhHHHHHhhhcCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 005257          585 VQGKLLDALDARLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKV  635 (705)
Q Consensus       585 ~~~~~~~~id~~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  635 (705)
                             .+.+..+.+..-+....+.+.+.+..|+.+|-++||++.+++++
T Consensus       239 -------~IpRNPPPkLkrp~kWs~~FndFIs~cL~Kd~e~RP~~~~ll~h  282 (953)
T KOG0587|consen  239 -------LIPRNPPPKLKRPKKWSKKFNDFISTCLVKDYEQRPSTEELLKH  282 (953)
T ss_pred             -------cCCCCCCccccchhhHHHHHHHHHHHHHhhccccCcchhhhccC
Confidence                   01111111122245667889999999999999999999998874

>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]

Probab=99.97  E-value=4.2e-32  Score=279.79  Aligned_cols=259  Identities=23%  Similarity=0.359  Sum_probs=203.4

Q ss_pred             HhCCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCC--ch-----hHHHHHHHHHHhccCCCCCcceeeeeeeecc
Q 005257          362 ATKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHEN--DG-----GTRAFLAEISSLGRLKHKSLVGLRGWCKREK  434 (705)
Q Consensus       362 at~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~--~~-----~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~  434 (705)
                      ..++|-..++||+|||+.|||+.+....+.||||+-....  ..     ..+...+|..+-+.|.||.||++++++.-+.
T Consensus       461 Ln~RYLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyfslDt  540 (775)
T KOG1151|consen  461 LNDRYLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYFSLDT  540 (775)
T ss_pred             hHHHHHHHHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeeeeeecc
Confidence            3446777889999999999999998888999999764331  11     1234678999999999999999999998778


Q ss_pred             CceEEEEeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEcc---CCCeeeee
Q 005257          435 GSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDK---EMNGRLGD  511 (705)
Q Consensus       435 ~~~~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~---~~~~kL~D  511 (705)
                      ..+|-|.|||+|.+|+-||++.+   .+++.++..|+.||+.||.||.+ ...+|||-||||.||||-.   .|.+||.|
T Consensus       541 dsFCTVLEYceGNDLDFYLKQhk---lmSEKEARSIiMQiVnAL~YLNE-ikpPIIHYDLKPgNILLv~GtacGeIKITD  616 (775)
T KOG1151|consen  541 DSFCTVLEYCEGNDLDFYLKQHK---LMSEKEARSIIMQIVNALKYLNE-IKPPIIHYDLKPGNILLVNGTACGEIKITD  616 (775)
T ss_pred             ccceeeeeecCCCchhHHHHhhh---hhhHHHHHHHHHHHHHHHHHHhc-cCCCeeeeccCCccEEEecCcccceeEeee
Confidence            88999999999999999998765   68999999999999999999986 5789999999999999954   47899999


Q ss_pred             eccceecCCCCcc------eeeeeeccccCCCccccccC----CCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHH
Q 005257          512 FGLARMHGHGQVA------STTRVVGTVGYLAPEVFSSG----RASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVW  581 (705)
Q Consensus       512 FGla~~~~~~~~~------~~~~~~gt~~y~APE~~~~~----~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~  581 (705)
                      |||++.+..+...      .+...+||.+|++||++.-+    +.+.|+||||.||++|.++.|+.||......     .
T Consensus       617 FGLSKIMdddSy~~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQClYGrKPFGhnqsQ-----Q  691 (775)
T KOG1151|consen  617 FGLSKIMDDDSYNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYGRKPFGHNQSQ-----Q  691 (775)
T ss_pred             cchhhhccCCccCcccceeeecccCceeeecCcceeecCCCCCccccceeeEeeehhhhhhhccCCCCCCchhH-----H
Confidence            9999988754432      23346899999999998533    5789999999999999999999999764321     1


Q ss_pred             HHHHhCchhHHHHHhhhcCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHH
Q 005257          582 ELMVQGKLLDALDARLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVV  633 (705)
Q Consensus       582 ~~~~~~~~~~~id~~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl  633 (705)
                      +.+....++.+-...+..+    +........+++.|++..-++|....++.
T Consensus       692 dILqeNTIlkAtEVqFP~K----PvVsseAkaFIRRCLaYRKeDR~DV~qLA  739 (775)
T KOG1151|consen  692 DILQENTILKATEVQFPPK----PVVSSEAKAFIRRCLAYRKEDRIDVQQLA  739 (775)
T ss_pred             HHHhhhchhcceeccCCCC----CccCHHHHHHHHHHHHhhhhhhhhHHHHc
Confidence            2233334443333333322    23335567889999999888887755543

>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]

Probab=99.97  E-value=1.3e-33  Score=273.05  Aligned_cols=277  Identities=26%  Similarity=0.387  Sum_probs=209.9

Q ss_pred             CCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCC--chhHHHHHHHHHHhccCCCCCcceeeeeeee-------ccCc
Q 005257          366 FSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHEN--DGGTRAFLAEISSLGRLKHKSLVGLRGWCKR-------EKGS  436 (705)
Q Consensus       366 f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~--~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~-------~~~~  436 (705)
                      |....+||+|.||.||+|..+.+++.||+|++-.++  ..-...-++|+++|..|+|+|++.++..|..       ....
T Consensus        19 yek~~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneKeGfpitalreikiL~~lkHenv~nliEic~tk~Tp~~r~r~t   98 (376)
T KOG0669|consen   19 YEKLAKIGQGTFGEVFKARSKNTGKKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPTNRDRAT   98 (376)
T ss_pred             HHHHHhcCCchHHHHHHHhhcCccchhHHHHHHHhccccCCcHHHHHHHHHHHHhcchhHHHHHHHHhhccCCcccccce
Confidence            445667999999999999999999999999876543  2334567899999999999999999999863       2335


Q ss_pred             eEEEEeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccce
Q 005257          437 LMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLAR  516 (705)
Q Consensus       437 ~~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~  516 (705)
                      +|+||++|+. +|.-+|....  .+++..++.+++.++..||.|+|.   ..|+|||+||.|+||+.++.+||+|||++|
T Consensus        99 ~ylVf~~ceh-DLaGlLsn~~--vr~sls~Ikk~Mk~Lm~GL~~iHr---~kilHRDmKaaNvLIt~dgilklADFGlar  172 (376)
T KOG0669|consen   99 FYLVFDFCEH-DLAGLLSNRK--VRFSLSEIKKVMKGLMNGLYYIHR---NKILHRDMKAANVLITKDGILKLADFGLAR  172 (376)
T ss_pred             eeeeHHHhhh-hHHHHhcCcc--ccccHHHHHHHHHHHHHHHHHHHH---hhHHhhcccHhhEEEcCCceEEeecccccc
Confidence            8999999987 8888885432  369999999999999999999998   999999999999999999999999999998


Q ss_pred             ecCCCCc---ceeeeeeccccCCCcccccc-CCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhHH
Q 005257          517 MHGHGQV---ASTTRVVGTVGYLAPEVFSS-GRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDA  592 (705)
Q Consensus       517 ~~~~~~~---~~~~~~~gt~~y~APE~~~~-~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~~  592 (705)
                      .+.....   ...+..+-|.+|++||.+.+ ..|+++.|||.-||++.||+||.+-+.+..+.                 
T Consensus       173 ~fs~~~n~~kprytnrvvTLwYrppEllLG~r~yg~~iDiWgAgCimaeMwtrspimqgnteq-----------------  235 (376)
T KOG0669|consen  173 AFSTSKNVVKPRYTNRVVTLWYRPPELLLGDREYGPPIDIWGAGCIMAEMWTRSPIMQGNTEQ-----------------  235 (376)
T ss_pred             ceecccccCCCCcccceeeeecCCHHHhhcccccCCcchhHhHHHHHHHHHccCccccCChHH-----------------
Confidence            7654322   22233456999999999877 46999999999999999999998887764321                 


Q ss_pred             HHHhhhcCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHH--HHHHHhccccCCCCC---------cchhhHHHHHHhhc
Q 005257          593 LDARLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQV--VKVLEGKIEAGIENE---------TEDMDAYLLQQVKS  661 (705)
Q Consensus       593 id~~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev--l~~L~~~~~~~~~~~---------~~~~~~~~~~~~~~  661 (705)
                                      +.+.-+-..|-+..|+--|.+..+  .+.++.  +..++..         +.-.++.-++++.+
T Consensus       236 ----------------qql~~Is~LcGs~tkevWP~~d~lpL~~sie~--ePl~~~~~rkv~n~~kp~~kd~~a~dLle~  297 (376)
T KOG0669|consen  236 ----------------QQLHLISQLCGSITKEVWPNVDNLPLYQSIEL--EPLPKGQKRKVKNRLKPYVKDDEALDLLEK  297 (376)
T ss_pred             ----------------HHHHHHHHHhccCCcccCCCcccchHHHhccC--CCCCcchhhhhhhhcccccCChhHHHHHHH
Confidence                            122223334555566666655432  222211  1011111         11113345667777


Q ss_pred             cccccccccccccCCCCCCCcc
Q 005257          662 KDMWANYSRSFGYGYATHPTFH  683 (705)
Q Consensus       662 ~~~~~~~~r~~~~~~~~hp~f~  683 (705)
                      ...++|..|..+.+++.|-||-
T Consensus       298 ll~~DP~kR~~ad~alnh~~F~  319 (376)
T KOG0669|consen  298 LLKLDPTKRIDADQALNHDFFW  319 (376)
T ss_pred             HhccCcccCcchHhhhchhhhh
Confidence            7789999999999999999993

>PLN03225 Serine/threonine-protein kinase SNT7; Provisional

Probab=99.97  E-value=1.9e-31  Score=304.16  Aligned_cols=262  Identities=16%  Similarity=0.185  Sum_probs=173.7

Q ss_pred             HhCCCCcceEEeecCceEEEEEEEcCC----CeEEEEEEeccCCchhHHHHHHHHHHhccCCCCCcceeeee----e-ee
Q 005257          362 ATKGFSEENVIGVGGNGKVYKGVLEGG----GAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGW----C-KR  432 (705)
Q Consensus       362 at~~f~~~~~LG~G~fg~Vy~~~~~~~----~~~vavK~i~~~~~~~~~~~~~Ei~~l~~l~Hpniv~l~g~----~-~~  432 (705)
                      ..++|...+.||+|+||.||+|++..+    +..||||++.....  .+....|  .+.+..+.++..+...    . ..
T Consensus       130 ~~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~~--~e~~~~e--~l~~~~~~~~~~~~~~~~~~~~~~  205 (566)
T PLN03225        130 KKDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYGA--VEIWMNE--RVRRACPNSCADFVYGFLEPVSSK  205 (566)
T ss_pred             ccCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccch--hHHHHHH--HHHhhchhhHHHHHHhhhcccccc
Confidence            567899999999999999999999888    89999998754322  1111111  1122222222222211    1 12


Q ss_pred             ccCceEEEEeeCCCCChhHHHHhcCCC-----------------CcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCC
Q 005257          433 EKGSLMLVYDYMENGSLDKWIFQCDGS-----------------MMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIK  495 (705)
Q Consensus       433 ~~~~~~lV~E~~~~gsL~~~L~~~~~~-----------------~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLk  495 (705)
                      .+...++||||+++++|.+++......                 .......+..++.|++.||.|||+   ++|+|||||
T Consensus       206 ~~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~---~gIiHRDLK  282 (566)
T PLN03225        206 KEDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHS---TGIVHRDVK  282 (566)
T ss_pred             cCCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHH---CCEEeCcCC
Confidence            356789999999999999998653210                 011234466899999999999998   999999999


Q ss_pred             CCCeEEcc-CCCeeeeeeccceecCCCCcceeeeeeccccCCCccccccC----------------------CCCccccE
Q 005257          496 SSNVLLDK-EMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSG----------------------RASTQTDV  552 (705)
Q Consensus       496 p~NILld~-~~~~kL~DFGla~~~~~~~~~~~~~~~gt~~y~APE~~~~~----------------------~~s~ksDV  552 (705)
                      |+|||++. ++.+||+|||+++..............|++.|||||.+...                      .++.++||
T Consensus       283 P~NILl~~~~~~~KL~DFGlA~~l~~~~~~~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~~~~k~DV  362 (566)
T PLN03225        283 PQNIIFSEGSGSFKIIDLGAAADLRVGINYIPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNLPDRFDI  362 (566)
T ss_pred             HHHEEEeCCCCcEEEEeCCCccccccccccCCcccccCCCccChHHhhccCCCCCCccccccccccchhccccCCCCccc
Confidence            99999986 57999999999986654433334456889999999976322                      23456799


Q ss_pred             EEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhHHHHHhhhcCCCCCHH----------HHHHHHHHHHHcCCCC
Q 005257          553 FGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRAKGGFDED----------EVERVLHLGLLCAYPD  622 (705)
Q Consensus       553 wS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~l~~~~~~~~~----------~~~~l~~l~~~Cl~~d  622 (705)
                      |||||+||||+++..|....   ...........+.-.........  .....+          ......+|+..|++.|
T Consensus       363 wSlGviL~el~~~~~~~~~~---~~~~~~~l~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~d~~~~~~~dLi~~mL~~d  437 (566)
T PLN03225        363 YSAGLIFLQMAFPNLRSDSN---LIQFNRQLKRNDYDLVAWRKLVE--PRASPDLRRGFEVLDLDGGAGWELLKSMMRFK  437 (566)
T ss_pred             HHHHHHHHHHHhCcCCCchH---HHHHHHHHHhcCCcHHHHHHhhc--cccchhhhhhhhhccccchHHHHHHHHHccCC
Confidence            99999999999977665432   11111111111111111111111  001111          1123457999999999


Q ss_pred             CCCCCCHHHHHHH
Q 005257          623 PRARPTMRQVVKV  635 (705)
Q Consensus       623 P~~RPs~~evl~~  635 (705)
                      |++|||+.|++++
T Consensus       438 P~kR~ta~e~L~H  450 (566)
T PLN03225        438 GRQRISAKAALAH  450 (566)
T ss_pred             cccCCCHHHHhCC
Confidence            9999999999985

>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.97  E-value=3.7e-33  Score=272.32  Aligned_cols=292  Identities=20%  Similarity=0.277  Sum_probs=219.9

Q ss_pred             CCcceEEeecCceEEEEEEEcCCCeEEEEEEeccC--CchhHHHHHHHHHHhccCCCCCcceeeeeeeec----cCceEE
Q 005257          366 FSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHE--NDGGTRAFLAEISSLGRLKHKSLVGLRGWCKRE----KGSLML  439 (705)
Q Consensus       366 f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~--~~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~----~~~~~l  439 (705)
                      .+..+.||.|+||.||..++..+|+.||+|++...  +-...+.+.+|+++|..++|.|++..++.....    -.++|.
T Consensus        55 i~PDRPIGYGAFGVVWsVTDPRdgrrvalkK~pnvfq~L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~dfFqEiYV  134 (449)
T KOG0664|consen   55 IQPDRPIGYGAFGVVWSVTDPRSGKRVALKKMPNVFQNLASCKRVFREIKMLSSFRHDNVLSLLDILQPANPSFFQELYV  134 (449)
T ss_pred             CCCCCcccccceeEEEeccCCCCccchhHhhcchHHHHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCchHHHHHHH
Confidence            34577899999999999999999999999998654  233467889999999999999999988765421    125678


Q ss_pred             EEeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecC
Q 005257          440 VYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHG  519 (705)
Q Consensus       440 V~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~  519 (705)
                      ++|.|.. +|.+.+-.   ...|+.+.+.-++.||++||.|||+   .+|.||||||.|.|+++|..+||||||++|..+
T Consensus       135 ~TELmQS-DLHKIIVS---PQ~Ls~DHvKVFlYQILRGLKYLHs---A~ILHRDIKPGNLLVNSNCvLKICDFGLARvee  207 (449)
T KOG0664|consen  135 LTELMQS-DLHKIIVS---PQALTPDHVKVFVYQILRGLKYLHT---ANILHRDIKPGNLLVNSNCILKICDFGLARTWD  207 (449)
T ss_pred             HHHHHHh-hhhheecc---CCCCCcchhhhhHHHHHhhhHHHhh---cchhhccCCCccEEeccCceEEecccccccccc
Confidence            8999954 88887754   2378999999999999999999999   999999999999999999999999999999988


Q ss_pred             CCCcceeeeeeccccCCCcccccc-CCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhHHHHHhhh
Q 005257          520 HGQVASTTRVVGTVGYLAPEVFSS-GRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDARLR  598 (705)
Q Consensus       520 ~~~~~~~~~~~gt~~y~APE~~~~-~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~l~  598 (705)
                      .++...++.-+-|..|+|||++.+ ..|+.+.||||.||++.||+..+..|....+-               ++++-...
T Consensus       208 ~d~~~hMTqEVVTQYYRAPEiLMGaRhYs~AvDiWSVGCIFaELLgRrILFQAq~Pi---------------qQL~lItd  272 (449)
T KOG0664|consen  208 QRDRLNMTHEVVTQYYRAPELLMGARRYTGAVDIWSVGCIFAELLQRKILFQAAGPI---------------EQLQMIID  272 (449)
T ss_pred             hhhhhhhHHHHHHHHhccHHHhhcchhhcCccceehhhHHHHHHHhhhhhhhccChH---------------HHHHHHHH
Confidence            777777766677999999999987 46999999999999999999999888765431               11111111


Q ss_pred             cCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHhccccCCCCCcchhhHHHHHHhhccccccccccccccCCCC
Q 005257          599 AKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLEGKIEAGIENETEDMDAYLLQQVKSKDMWANYSRSFGYGYAT  678 (705)
Q Consensus       599 ~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~  678 (705)
                      ..+....+.+...++=++.-+-.-|-+-|+..-+.. |.     .+    .+....-+..+..+..+++..|....+++.
T Consensus       273 LLGTPs~EaMr~ACEGAk~H~LR~~~k~Ps~~vLYt-ls-----S~----~~~~heav~~~~~~l~~d~dkris~~~A~~  342 (449)
T KOG0664|consen  273 LLGTPSQEAMKYACEGAKNHVLRAGLRAPDTQRLYK-IA-----SP----DDKNHEAVDLLQKLLHFDPDKRISVEEALQ  342 (449)
T ss_pred             HhCCCcHHHHHHHhhhhHHHhhccCCCCCCccceee-ec-----CC----cccchHHHHHHHHHhCCCCcccccHhhhcc
Confidence            114445555554444444433345555666543322 11     11    111222333444566789999999999999


Q ss_pred             CCCcccccccc
Q 005257          679 HPTFHDIRQSN  689 (705)
Q Consensus       679 hp~f~~~~~~~  689 (705)
                      |||..+.|-..
T Consensus       343 ~~~~~e~R~r~  353 (449)
T KOG0664|consen  343 HRYLEEGRLRF  353 (449)
T ss_pred             cccccccceee
Confidence            99999888543

>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins

Probab=99.97  E-value=9e-32  Score=275.04  Aligned_cols=220  Identities=19%  Similarity=0.154  Sum_probs=177.1

Q ss_pred             cCceEEEEEEEcCCCeEEEEEEeccCCchhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEEEEeeCCCCChhHHHH
Q 005257          375 GGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIF  454 (705)
Q Consensus       375 G~fg~Vy~~~~~~~~~~vavK~i~~~~~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~lV~E~~~~gsL~~~L~  454 (705)
                      |.+|.||++.+..+++.+|+|++....     .+.+|...+....||||+++++++.. ....++||||+++|+|.+++.
T Consensus         4 g~~~~v~~~~~~~~~~~~~~K~i~~~~-----~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~~~lv~e~~~~~~L~~~l~   77 (237)
T cd05576           4 GVIDKVLLVMDTRTQQTFILKGLRKSS-----EYSRERLTIIPHCVPNMVCLHKYIVS-EDSVFLVLQHAEGGKLWSHIS   77 (237)
T ss_pred             cccceEEEEEEccCCcEEEEEeecchh-----hhhhHHHHHHhcCCCceeehhhheec-CCeEEEEEecCCCCCHHHHHH
Confidence            899999999999999999999986543     23345555556679999999998876 678899999999999999986


Q ss_pred             hcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecCCCCcceeeeeecccc
Q 005257          455 QCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRVVGTVG  534 (705)
Q Consensus       455 ~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~~~~~~~~~~~~gt~~  534 (705)
                      +..   .+++.++..++.|++.||.|||+   ++++||||||+||+++.++.++++|||++.......    ....++..
T Consensus        78 ~~~---~l~~~~~~~~~~ql~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~~l~df~~~~~~~~~~----~~~~~~~~  147 (237)
T cd05576          78 KFL---NIPEECVKRWAAEMVVALDALHR---EGIVCRDLNPNNILLDDRGHIQLTYFSRWSEVEDSC----DGEAVENM  147 (237)
T ss_pred             Hhc---CCCHHHHHHHHHHHHHHHHHHHh---CCeeccCCCHHHEEEcCCCCEEEecccchhcccccc----ccCCcCcc
Confidence            543   58999999999999999999998   999999999999999999999999999886554321    12345778


Q ss_pred             CCCccccccCCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhHHHHHhhhcCCCCCHHHHHHHHHH
Q 005257          535 YLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRAKGGFDEDEVERVLHL  614 (705)
Q Consensus       535 y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~l~~~~~~~~~~~~~l~~l  614 (705)
                      |+|||.+.+..++.++||||+||++|||++|+.|+.......        ...       ..    ...+......+.++
T Consensus       148 y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~~~~~~~~~~--------~~~-------~~----~~~~~~~~~~~~~l  208 (237)
T cd05576         148 YCAPEVGGISEETEACDWWSLGAILFELLTGKTLVECHPSGI--------NTH-------TT----LNIPEWVSEEARSL  208 (237)
T ss_pred             ccCCcccCCCCCCchhhHHHHHHHHHHHHHCcchhhcCchhc--------ccc-------cc----cCCcccCCHHHHHH
Confidence            999999988889999999999999999999998875321100        000       00    01122234567889


Q ss_pred             HHHcCCCCCCCCCCH
Q 005257          615 GLLCAYPDPRARPTM  629 (705)
Q Consensus       615 ~~~Cl~~dP~~RPs~  629 (705)
                      +.+|++.||++||++
T Consensus       209 i~~~l~~dp~~R~~~  223 (237)
T cd05576         209 LQQLLQFNPTERLGA  223 (237)
T ss_pred             HHHHccCCHHHhcCC
Confidence            999999999999996

Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha

>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.97  E-value=5.8e-32  Score=276.83  Aligned_cols=242  Identities=24%  Similarity=0.378  Sum_probs=197.3

Q ss_pred             hCCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccC---CchhHHHHHHHHHHhccC-CCCCcceeeeeeeeccCceE
Q 005257          363 TKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHE---NDGGTRAFLAEISSLGRL-KHKSLVGLRGWCKREKGSLM  438 (705)
Q Consensus       363 t~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~---~~~~~~~~~~Ei~~l~~l-~Hpniv~l~g~~~~~~~~~~  438 (705)
                      ..+|....+||+|+||.|.++..+++.+.+|||++++.   .+.+.+--+.|-++|.-. +-|.++++...+.. -+++|
T Consensus       348 ~tDFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScFQT-mDRLy  426 (683)
T KOG0696|consen  348 ATDFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCFQT-MDRLY  426 (683)
T ss_pred             ecccceEEEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHhhh-hhhee
Confidence            34688899999999999999999999999999999765   233344456677888777 56677888875554 77999


Q ss_pred             EEEeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceec
Q 005257          439 LVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMH  518 (705)
Q Consensus       439 lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~  518 (705)
                      +||||+.||+|-.++.+-+   .+.+..+.-++.+||-||-+||+   ++||.||||..|||||.+|++||+|||+++.-
T Consensus       427 FVMEyvnGGDLMyhiQQ~G---kFKEp~AvFYAaEiaigLFFLh~---kgIiYRDLKLDNvmLd~eGHiKi~DFGmcKEn  500 (683)
T KOG0696|consen  427 FVMEYVNGGDLMYHIQQVG---KFKEPVAVFYAAEIAIGLFFLHS---KGIIYRDLKLDNVMLDSEGHIKIADFGMCKEN  500 (683)
T ss_pred             eEEEEecCchhhhHHHHhc---ccCCchhhhhhHHHHHHhhhhhc---CCeeeeeccccceEeccCCceEeeeccccccc
Confidence            9999999999988887654   58888999999999999999998   99999999999999999999999999999854


Q ss_pred             CCCCcceeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhHHHHHhhh
Q 005257          519 GHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDARLR  598 (705)
Q Consensus       519 ~~~~~~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~l~  598 (705)
                      -.+. ..+...+||+.|+|||++...+|...+|.|||||+||||+.|+.||++.++.   .+.+.+.+.+          
T Consensus       501 i~~~-~TTkTFCGTPdYiAPEIi~YqPYgksvDWWa~GVLLyEmlaGQpPFdGeDE~---elF~aI~ehn----------  566 (683)
T KOG0696|consen  501 IFDG-VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDED---ELFQAIMEHN----------  566 (683)
T ss_pred             ccCC-cceeeecCCCcccccceEEecccccchhHHHHHHHHHHHHcCCCCCCCCCHH---HHHHHHHHcc----------
Confidence            3322 2345589999999999999999999999999999999999999999987653   2222222211          


Q ss_pred             cCCCCCHHHHHHHHHHHHHcCCCCCCCCC
Q 005257          599 AKGGFDEDEVERVLHLGLLCAYPDPRARP  627 (705)
Q Consensus       599 ~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP  627 (705)
                        ..|+.....+...+....+...|.+|-
T Consensus       567 --vsyPKslSkEAv~ickg~ltK~P~kRL  593 (683)
T KOG0696|consen  567 --VSYPKSLSKEAVAICKGLLTKHPGKRL  593 (683)
T ss_pred             --CcCcccccHHHHHHHHHHhhcCCcccc
Confidence              345555666677777778888888884

>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]

Probab=99.97  E-value=7.1e-32  Score=267.03  Aligned_cols=250  Identities=24%  Similarity=0.326  Sum_probs=196.6

Q ss_pred             hCCCCcc-eEEeecCceEEEEEEEcCCCeEEEEEEeccCCchhHHHHHHHHHHhccC-CCCCcceeeeeee---eccCce
Q 005257          363 TKGFSEE-NVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRL-KHKSLVGLRGWCK---REKGSL  437 (705)
Q Consensus       363 t~~f~~~-~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~~~~~~~~~Ei~~l~~l-~Hpniv~l~g~~~---~~~~~~  437 (705)
                      +++|++. ++||-|-.|.|-.+.++.+++.+|+|++...     ..-.+|+++--.. .|||||.+++++.   ....++
T Consensus        60 tedY~is~qvLG~GinGkV~~C~~k~T~ekfALKvL~Ds-----~KARrEVeLHw~~s~h~~iV~IidVyeNs~~~rkcL  134 (400)
T KOG0604|consen   60 TEDYSISWQVLGAGINGKVVQCVHKRTQEKFALKVLLDS-----PKARREVELHWMASGHPHIVSIIDVYENSYQGRKCL  134 (400)
T ss_pred             hhhheehhhhhccccCCceEEEEeccchhhhHHHHHhcC-----HHHHhHhhhhhhhcCCCceEEeehhhhhhccCceee
Confidence            4445443 5799999999999999999999999988532     3445677764333 6999999999874   335578


Q ss_pred             EEEEeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEcc---CCCeeeeeecc
Q 005257          438 MLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDK---EMNGRLGDFGL  514 (705)
Q Consensus       438 ~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~---~~~~kL~DFGl  514 (705)
                      .+|||+|+||.|...+.+.+. ..+++.++-.|++||+.|+.|||+   .+|.||||||+|+|...   |..+||+|||.
T Consensus       135 LiVmE~meGGeLfsriq~~g~-~afTErea~eI~~qI~~Av~~lH~---~nIAHRDlKpENLLyt~t~~na~lKLtDfGF  210 (400)
T KOG0604|consen  135 LIVMECMEGGELFSRIQDRGD-QAFTEREASEIMKQIGLAVRYLHS---MNIAHRDLKPENLLYTTTSPNAPLKLTDFGF  210 (400)
T ss_pred             EeeeecccchHHHHHHHHccc-ccchHHHHHHHHHHHHHHHHHHHh---cchhhccCChhheeeecCCCCcceEeccccc
Confidence            999999999999999977554 379999999999999999999999   99999999999999964   45689999999


Q ss_pred             ceecCCCCcceeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhhCCCCCCCCCcc-HHHHHHHHHHhCchhHHH
Q 005257          515 ARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPN-LVEMVWELMVQGKLLDAL  593 (705)
Q Consensus       515 a~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~-~~~~v~~~~~~~~~~~~i  593 (705)
                      |+......  .....+-|+.|.|||++...+|+..+|+||+||++|-|+||.+||...... +..-....+..|      
T Consensus       211 AK~t~~~~--~L~TPc~TPyYvaPevlg~eKydkscdmwSlgVimYIlLCGyPPFYS~hg~aispgMk~rI~~g------  282 (400)
T KOG0604|consen  211 AKETQEPG--DLMTPCFTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKRRIRTG------  282 (400)
T ss_pred             ccccCCCc--cccCCcccccccCHHHhCchhcCCCCCccchhHHHHHhhcCCCcccccCCccCChhHHhHhhcc------
Confidence            98765422  233457799999999999999999999999999999999999999764321 111111111111      


Q ss_pred             HHhhhcCCCCCHHH----HHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 005257          594 DARLRAKGGFDEDE----VERVLHLGLLCAYPDPRARPTMRQVVKV  635 (705)
Q Consensus       594 d~~l~~~~~~~~~~----~~~l~~l~~~Cl~~dP~~RPs~~evl~~  635 (705)
                            ..+++.++    .+...++++..+..+|.+|-|+.+++.+
T Consensus       283 ------qy~FP~pEWs~VSe~aKdlIR~LLkt~PteRlTI~~~m~h  322 (400)
T KOG0604|consen  283 ------QYEFPEPEWSCVSEAAKDLIRKLLKTEPTERLTIEEVMDH  322 (400)
T ss_pred             ------CccCCChhHhHHHHHHHHHHHHHhcCCchhheeHHHhhcC
Confidence                  12344433    3567788888999999999999999874

>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain

Probab=99.97  E-value=9e-31  Score=265.67  Aligned_cols=239  Identities=29%  Similarity=0.391  Sum_probs=194.7

Q ss_pred             CceEEEEEEEcCCCeEEEEEEeccCCchh-HHHHHHHHHHhccCCCCCcceeeeeeeeccCceEEEEeeCCCCChhHHHH
Q 005257          376 GNGKVYKGVLEGGGAEIAVKRISHENDGG-TRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIF  454 (705)
Q Consensus       376 ~fg~Vy~~~~~~~~~~vavK~i~~~~~~~-~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~lV~E~~~~gsL~~~L~  454 (705)
                      +||.||+|...++++.+|+|++....... .+.+.+|++.+++++|+|++++++++.. ....++++||+++++|.+++.
T Consensus         1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~-~~~~~l~~e~~~~~~L~~~~~   79 (244)
T smart00220        1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKKRERILREISILKKLKHPNIVRLYDVFED-EDKLYLVMEYCDGGDLFDLLK   79 (244)
T ss_pred             CceEEEEEEECCCCcEEEEEEecccccccHHHHHHHHHHHHHhCCCCcHHHHHhheee-CCEEEEEEeCCCCCCHHHHHH
Confidence            58999999999889999999997665444 6889999999999999999999999876 568899999999999999986


Q ss_pred             hcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecCCCCcceeeeeecccc
Q 005257          455 QCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRVVGTVG  534 (705)
Q Consensus       455 ~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~~~~~~~~~~~~gt~~  534 (705)
                      ...   .+++..++.++.+++.++.|||+   .+++|+||+|+||+++.++.++|+|||.+.......  ......++..
T Consensus        80 ~~~---~~~~~~~~~~~~~l~~~l~~lh~---~~i~h~~i~~~ni~~~~~~~~~l~d~~~~~~~~~~~--~~~~~~~~~~  151 (244)
T smart00220       80 KRG---RLSEDEARFYARQILSALEYLHS---NGIIHRDLKPENILLDEDGHVKLADFGLARQLDPGG--LLTTFVGTPE  151 (244)
T ss_pred             hcc---CCCHHHHHHHHHHHHHHHHHHHH---cCeecCCcCHHHeEECCCCcEEEccccceeeecccc--ccccccCCcC
Confidence            543   38899999999999999999998   899999999999999999999999999998765442  2233567889


Q ss_pred             CCCccccccCCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhHHHHHhhhcCCCCCHHHHHHHHHH
Q 005257          535 YLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRAKGGFDEDEVERVLHL  614 (705)
Q Consensus       535 y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~l~~~~~~~~~~~~~l~~l  614 (705)
                      |++||.+.....+.++||||||++++||++|..||......  ....+....+...         ...........+.++
T Consensus       152 ~~~pE~~~~~~~~~~~Di~slG~~l~~l~~~~~p~~~~~~~--~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~  220 (244)
T smart00220      152 YMAPEVLLGKGYGKAVDVWSLGVILYELLTGKPPFPGDDQL--LELFKKIGKPKPP---------FPPPEWKISPEAKDL  220 (244)
T ss_pred             CCCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcH--HHHHHHHhccCCC---------CccccccCCHHHHHH
Confidence            99999998888899999999999999999999999762211  1111111111110         000000044678899


Q ss_pred             HHHcCCCCCCCCCCHHHHHH
Q 005257          615 GLLCAYPDPRARPTMRQVVK  634 (705)
Q Consensus       615 ~~~Cl~~dP~~RPs~~evl~  634 (705)
                      +.+|+..+|++||++.++++
T Consensus       221 i~~~l~~~p~~Rp~~~~~~~  240 (244)
T smart00220      221 IRKLLVKDPEKRLTAEEALQ  240 (244)
T ss_pred             HHHHccCCchhccCHHHHhh
Confidence            99999999999999999986

Phosphotransferases. Serine or threonine-specific kinase subfamily.

>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]

Probab=99.97  E-value=1.4e-31  Score=290.39  Aligned_cols=242  Identities=24%  Similarity=0.269  Sum_probs=197.2

Q ss_pred             HhCCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCCchhHHHHHHHHHHhccC-CCCCcceeeeeeeeccCceEEE
Q 005257          362 ATKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRL-KHKSLVGLRGWCKREKGSLMLV  440 (705)
Q Consensus       362 at~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~~~~~~~~~Ei~~l~~l-~Hpniv~l~g~~~~~~~~~~lV  440 (705)
                      .+..|.....+|.|+|+.|-++.+..+++..++|++.+...    +-.+|+.++... +||||+++.+.+.+ +.+.++|
T Consensus       320 ~~~~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~~~----~~~~e~~~~~~~~~h~niv~~~~v~~~-~~~~~~v  394 (612)
T KOG0603|consen  320 FTESYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKRAD----DNQDEIPISLLVRDHPNIVKSHDVYED-GKEIYLV  394 (612)
T ss_pred             cchhhccccccCCCCccceeeeeccccccchhheecccccc----ccccccchhhhhcCCCcceeecceecC-Cceeeee
Confidence            35677778889999999999999999999999999976522    223567666655 79999999999886 6789999


Q ss_pred             EeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEE-ccCCCeeeeeeccceecC
Q 005257          441 YDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLL-DKEMNGRLGDFGLARMHG  519 (705)
Q Consensus       441 ~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILl-d~~~~~kL~DFGla~~~~  519 (705)
                      ||.+.++-|.+.+....    ....++..|+.+|+.|+.|||+   ++||||||||+|||+ ++.++++|+|||.++...
T Consensus       395 ~e~l~g~ell~ri~~~~----~~~~e~~~w~~~lv~Av~~LH~---~gvvhRDLkp~NIL~~~~~g~lrltyFG~a~~~~  467 (612)
T KOG0603|consen  395 MELLDGGELLRRIRSKP----EFCSEASQWAAELVSAVDYLHE---QGVVHRDLKPGNILLDGSAGHLRLTYFGFWSELE  467 (612)
T ss_pred             ehhccccHHHHHHHhcc----hhHHHHHHHHHHHHHHHHHHHh---cCeeecCCChhheeecCCCCcEEEEEechhhhCc
Confidence            99999998888776543    2337888899999999999998   999999999999999 588999999999998776


Q ss_pred             CCCcceeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhHHHHHhhhc
Q 005257          520 HGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRA  599 (705)
Q Consensus       520 ~~~~~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~l~~  599 (705)
                      ..    ....+-|..|.|||++....+++++|+||||++||||++|+.||......  ......+..             
T Consensus       468 ~~----~~tp~~t~~y~APEvl~~~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~--~ei~~~i~~-------------  528 (612)
T KOG0603|consen  468 RS----CDTPALTLQYVAPEVLAIQEYTEACDWWSLGVLLYEMLTGRTLFAAHPAG--IEIHTRIQM-------------  528 (612)
T ss_pred             hh----hcccchhhcccChhhhccCCCCcchhhHHHHHHHHHHHhCCCccccCCch--HHHHHhhcC-------------
Confidence            55    12234588999999999999999999999999999999999999865432  111112221             


Q ss_pred             CCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 005257          600 KGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKV  635 (705)
Q Consensus       600 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  635 (705)
                       +.++........+|+.+|++.||.+||+|.++..+
T Consensus       529 -~~~s~~vS~~AKdLl~~LL~~dP~~Rl~~~~i~~h  563 (612)
T KOG0603|consen  529 -PKFSECVSDEAKDLLQQLLQVDPALRLGADEIGAH  563 (612)
T ss_pred             -CccccccCHHHHHHHHHhccCChhhCcChhhhccC
Confidence             33344555678899999999999999999999874

>PLN03224 probable serine/threonine protein kinase; Provisional

Probab=99.97  E-value=1.3e-30  Score=290.59  Aligned_cols=267  Identities=19%  Similarity=0.254  Sum_probs=181.9

Q ss_pred             HhCCCCcceEEeecCceEEEEEEEc----------------CCCeEEEEEEeccCCchhHHHH--------------HHH
Q 005257          362 ATKGFSEENVIGVGGNGKVYKGVLE----------------GGGAEIAVKRISHENDGGTRAF--------------LAE  411 (705)
Q Consensus       362 at~~f~~~~~LG~G~fg~Vy~~~~~----------------~~~~~vavK~i~~~~~~~~~~~--------------~~E  411 (705)
                      ..++|++.++||+|+||.||+|.+.                ..++.||||++........++|              ..|
T Consensus       143 ~~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~vE  222 (507)
T PLN03224        143 SSDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMVE  222 (507)
T ss_pred             cccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHHH
Confidence            3678999999999999999999752                2346799999876544333334              346


Q ss_pred             HHHhccCCCCCc-----ceeeeeeee-------ccCceEEEEeeCCCCChhHHHHhcCC---------------------
Q 005257          412 ISSLGRLKHKSL-----VGLRGWCKR-------EKGSLMLVYDYMENGSLDKWIFQCDG---------------------  458 (705)
Q Consensus       412 i~~l~~l~Hpni-----v~l~g~~~~-------~~~~~~lV~E~~~~gsL~~~L~~~~~---------------------  458 (705)
                      +.++.+++|.++     ++++++|..       .++..+|||||+++++|.++|+....                     
T Consensus       223 ~~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~  302 (507)
T PLN03224        223 AYMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMP  302 (507)
T ss_pred             HHHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhcc
Confidence            777777776654     667777653       13568999999999999999874211                     


Q ss_pred             CCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecCCCCcceeeeeeccccCCCc
Q 005257          459 SMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAP  538 (705)
Q Consensus       459 ~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~~~~~~~~~~~~gt~~y~AP  538 (705)
                      ...+++..+..++.|++.||.|||+   .+|+||||||+|||++.++.+||+|||+++..............+|+.|+||
T Consensus       303 ~~~~~~~~~~~i~~ql~~aL~~lH~---~~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~g~~tp~Y~aP  379 (507)
T PLN03224        303 QDKRDINVIKGVMRQVLTGLRKLHR---IGIVHRDIKPENLLVTVDGQVKIIDFGAAVDMCTGINFNPLYGMLDPRYSPP  379 (507)
T ss_pred             cccCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCchHhEEECCCCcEEEEeCcCccccccCCccCccccCCCcceeCh
Confidence            1135677889999999999999998   8999999999999999999999999999976544322222223457899999


Q ss_pred             cccccCCC----------------------CccccEEEEehhHHHHhhCCC-CCCCCCccHHHHHHHHHHhCchhHHHHH
Q 005257          539 EVFSSGRA----------------------STQTDVFGFGILILEVLSGRR-PIEEGKPNLVEMVWELMVQGKLLDALDA  595 (705)
Q Consensus       539 E~~~~~~~----------------------s~ksDVwS~Gvvl~ElltG~~-Pf~~~~~~~~~~v~~~~~~~~~~~~id~  595 (705)
                      |.+.....                      ..+.||||+||+++||++|.. |+..... .....   ............
T Consensus       380 E~l~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~~~~~-f~~~~---~~~~~~~~~~r~  455 (507)
T PLN03224        380 EELVMPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVANIRL-FNTEL---RQYDNDLNRWRM  455 (507)
T ss_pred             hhhcCCCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCccchhh-hhhHH---hhccchHHHHHh
Confidence            99754321                      234799999999999999875 6643211 00000   000000000000


Q ss_pred             hhhcCCCCC--HHHHHHHHHHHHHcCCCCC---CCCCCHHHHHHH
Q 005257          596 RLRAKGGFD--EDEVERVLHLGLLCAYPDP---RARPTMRQVVKV  635 (705)
Q Consensus       596 ~l~~~~~~~--~~~~~~l~~l~~~Cl~~dP---~~RPs~~evl~~  635 (705)
                      .......++  ........+++..++..+|   .+|+|+.|++++
T Consensus       456 ~~~~~~~~~~~d~~s~~~~dLi~~LL~~~~~~~~~RlSa~eaL~H  500 (507)
T PLN03224        456 YKGQKYDFSLLDRNKEAGWDLACKLITKRDQANRGRLSVGQALSH  500 (507)
T ss_pred             hcccCCCcccccccChHHHHHHHHHhccCCCCcccCCCHHHHhCC
Confidence            000001111  1233556777888887655   789999999875

>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]

Probab=99.97  E-value=6e-31  Score=248.08  Aligned_cols=203  Identities=26%  Similarity=0.353  Sum_probs=171.0

Q ss_pred             CCcceEEeecCceEEEEEEEcCCCeEEEEEEeccC-CchhHHHHHHHHHHhccC-CCCCcceeeeeeeeccCceEEEEee
Q 005257          366 FSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHE-NDGGTRAFLAEISSLGRL-KHKSLVGLRGWCKREKGSLMLVYDY  443 (705)
Q Consensus       366 f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~-~~~~~~~~~~Ei~~l~~l-~Hpniv~l~g~~~~~~~~~~lV~E~  443 (705)
                      ......||+|++|.|-+-++..+|...|+|++... +.+..++.++|+.+..+- ..|.+|.++|...+ .+..++.||.
T Consensus        48 L~~i~elGrGayG~vekmrh~~sg~imAvKri~~tvn~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~r-egdvwIcME~  126 (282)
T KOG0984|consen   48 LVGIEELGRGAYGVVEKMRHIQSGTIMAVKRIRATVNSQEQKRLLMDLDIIMRTVDCPFTVHFYGALFR-EGDVWICMEL  126 (282)
T ss_pred             hhhhhhhcCCccchhhheeeccCCeEEEEeeehhhcChHHHHHHHHhhhhhccCCCCCeEEEeehhhhc-cccEEEeHHH
Confidence            33456799999999999999999999999999765 556677889999886665 79999999998776 6789999999


Q ss_pred             CCCCChhHHHHhc-CCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecCCCC
Q 005257          444 MENGSLDKWIFQC-DGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQ  522 (705)
Q Consensus       444 ~~~gsL~~~L~~~-~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~~~~  522 (705)
                      |.. ||+.+..+- +....+++.-+-+|+..+.+||.|||+  +..+||||+||+|||++.+|++|+||||.+-.+.+.-
T Consensus       127 M~t-Sldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~--kL~vIHRDvKPsNiLIn~~GqVKiCDFGIsG~L~dSi  203 (282)
T KOG0984|consen  127 MDT-SLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHS--KLSVIHRDVKPSNILINYDGQVKICDFGISGYLVDSI  203 (282)
T ss_pred             hhh-hHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHH--HhhhhhccCCcceEEEccCCcEEEcccccceeehhhh
Confidence            964 888876542 334478999999999999999999999  6899999999999999999999999999997665432


Q ss_pred             cceeeeeeccccCCCcccccc----CCCCccccEEEEehhHHHHhhCCCCCCCCCc
Q 005257          523 VASTTRVVGTVGYLAPEVFSS----GRASTQTDVFGFGILILEVLSGRRPIEEGKP  574 (705)
Q Consensus       523 ~~~~~~~~gt~~y~APE~~~~----~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~  574 (705)
                      .  .+...|-..|||||.+..    ..|+-|+||||||+.+.||.+++.||+....
T Consensus       204 A--kt~daGCkpYmaPEri~~e~n~~gY~vksDvWSLGItmiElA~lr~PY~~w~t  257 (282)
T KOG0984|consen  204 A--KTMDAGCKPYMAPERINPELNQKGYSVKSDVWSLGITMIEMAILRFPYESWGT  257 (282)
T ss_pred             H--HHHhcCCCccCChhhcCcccCcccceeehhhhhhhhhhhhhhhccccccccCC
Confidence            2  222467788999999854    3689999999999999999999999986543

>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.96  E-value=4.6e-30  Score=268.83  Aligned_cols=300  Identities=21%  Similarity=0.239  Sum_probs=207.8

Q ss_pred             hCCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCCchhHHHHHHHHHHhccCC-----C---CCcceeeeeeee--
Q 005257          363 TKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLK-----H---KSLVGLRGWCKR--  432 (705)
Q Consensus       363 t~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~~~~~~~~~Ei~~l~~l~-----H---pniv~l~g~~~~--  432 (705)
                      ..+|...++||.|.|++||++.+..+.+.||+|+.+.. ..-.+.-+.||++|++++     |   ..||+|++.|..  
T Consensus        77 ~gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSA-qhYtEaAlDEIklL~~v~~~Dp~~~~~~~VV~LlD~FkhsG  155 (590)
T KOG1290|consen   77 GGRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKSA-QHYTEAALDEIKLLQQVREGDPNDPGKKCVVQLLDHFKHSG  155 (590)
T ss_pred             CceEEEEEeccccccceeEEEeeccCCeEEEEEEEehh-hHHHHHHHHHHHHHHHHHhcCCCCCCCceeeeeeccceecC
Confidence            36788999999999999999999999999999988543 334566788999999984     3   359999998864  


Q ss_pred             -ccCceEEEEeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEcc--------
Q 005257          433 -EKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDK--------  503 (705)
Q Consensus       433 -~~~~~~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~--------  503 (705)
                       .+.++|+|+|++ |-+|..+|.....+ .++...+.+|++||+.||.|||.  +.+|||-||||+|||+..        
T Consensus       156 pNG~HVCMVfEvL-GdnLLklI~~s~Yr-Glpl~~VK~I~~qvL~GLdYLH~--ecgIIHTDlKPENvLl~~~e~~~~~~  231 (590)
T KOG1290|consen  156 PNGQHVCMVFEVL-GDNLLKLIKYSNYR-GLPLSCVKEICRQVLTGLDYLHR--ECGIIHTDLKPENVLLCSTEIDPAKD  231 (590)
T ss_pred             CCCcEEEEEehhh-hhHHHHHHHHhCCC-CCcHHHHHHHHHHHHHHHHHHHH--hcCccccCCCcceeeeeccccchhhh
Confidence             245899999999 66999999877655 69999999999999999999999  479999999999999900        


Q ss_pred             --------------------------------------------------------------------------------
Q 005257          504 --------------------------------------------------------------------------------  503 (705)
Q Consensus       504 --------------------------------------------------------------------------------  503 (705)
                                                                                                      
T Consensus       232 ~~~a~e~~~~~p~~s~s~~~t~~d~~~~~~~~~~s~~~~k~~~kk~~r~~~~~~~~l~~~~~~~~~~~~~s~n~~~~~n~  311 (590)
T KOG1290|consen  232 AREAGEATTSLPKMSPSAVSTRPDALQRMAAEPMSKSKFKKMKKKLKRQAKKLEASLAGLEGIEEEPNQESYNNEPRING  311 (590)
T ss_pred             hhhhccccccCCCCCcccccccccccchhhccccchhhHHHHHHHHhhhhhhhhhhhcccccccccccccccccccCCCc
Confidence                                                                                            


Q ss_pred             ------------------------------------------------------------------------------CC
Q 005257          504 ------------------------------------------------------------------------------EM  505 (705)
Q Consensus       504 ------------------------------------------------------------------------------~~  505 (705)
                                                                                                    +.
T Consensus       312 ~~~~v~~~~~~~~~~~~~~~~n~~~k~~e~~~~~~~sl~~~~~~~~~t~~~~~~~s~~s~~~~~~n~~v~p~~~~~~~di  391 (590)
T KOG1290|consen  312 NESTVERSTLEEDSNENGNRENLPIKSPENFRGNNTSLPESQLRDSATPSDGSLSSPSSPGTIASNPLVNPDIPLPECDI  391 (590)
T ss_pred             cccchhhcccccccccccCCccccccCccccccccccccchhcccccccccccccCcCCccccccccccCCCCCCCccce
Confidence                                                                                          00


Q ss_pred             CeeeeeeccceecCCCCcceeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhhCCCCCCCCCc-----cHHHHH
Q 005257          506 NGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKP-----NLVEMV  580 (705)
Q Consensus       506 ~~kL~DFGla~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~-----~~~~~v  580 (705)
                      ++||+|||-|+.....    .+.-+.|..|+|||++.+..|++.+||||++|+++||+||...|++...     +.....
T Consensus       392 ~vKIaDlGNACW~~kh----FT~DIQTRQYRapEVllGsgY~~~ADiWS~AC~~FELaTGDyLFePhsG~~Y~rDEDHiA  467 (590)
T KOG1290|consen  392 RVKIADLGNACWVHKH----FTEDIQTRQYRAPEVLLGSGYSTSADIWSTACMAFELATGDYLFEPHSGENYSRDEDHIA  467 (590)
T ss_pred             eEEEeeccchhhhhhh----hchhhhhhhccCcceeecCCCCCchhHHHHHHHHHHhhcCceeecCCCCCCCCccHHHHH
Confidence            1456666666543321    1223568889999999999999999999999999999999999975321     111111


Q ss_pred             HHHHHhCchhHHHHHhhhcCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHhccccCCCCCcchhhHHHHHHhh
Q 005257          581 WELMVQGKLLDALDARLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLEGKIEAGIENETEDMDAYLLQQVK  660 (705)
Q Consensus       581 ~~~~~~~~~~~~id~~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~~~~~~~~~~~~~~~~~~~~  660 (705)
                      ...-.-|.++.    .+...+.+..+...+--+   .|    --.|-.+--+.+.|.+..+ .++.+    ...+.+++.
T Consensus       468 ~i~ELLG~iPr----~ia~~Gk~SRdFFnr~G~---Lr----hI~~LK~WpL~~VL~eKY~-~s~e~----A~~fsdFL~  531 (590)
T KOG1290|consen  468 LIMELLGKIPR----KIALGGKYSRDFFNRRGE---LR----HIRRLKPWPLYEVLIEKYE-WSEED----AQQFSDFLS  531 (590)
T ss_pred             HHHHHHhhccH----HHHhcCcchHhhhccccc---ee----cccccCCCcHHHHHHHHhC-CCHHH----HHHHHHHHH
Confidence            11111232222    222223344333211000   00    0111111123334443433 33322    334555666


Q ss_pred             ccccccccccccccCCCCCCCcccccc
Q 005257          661 SKDMWANYSRSFGYGYATHPTFHDIRQ  687 (705)
Q Consensus       661 ~~~~~~~~~r~~~~~~~~hp~f~~~~~  687 (705)
                      -|..+.|.+|.+|.+|+.|||+++.-.
T Consensus       532 PmLef~PeKR~tA~~cl~hPwLn~~~~  558 (590)
T KOG1290|consen  532 PMLEFDPEKRPTAAQCLKHPWLNPVAG  558 (590)
T ss_pred             HHHhcCccccccHHHHhcCccccCCCC
Confidence            677799999999999999999986554

>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=99.96  E-value=4.5e-30  Score=274.60  Aligned_cols=203  Identities=25%  Similarity=0.391  Sum_probs=175.7

Q ss_pred             CCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCC---chhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEEEE
Q 005257          365 GFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHEN---DGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVY  441 (705)
Q Consensus       365 ~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~---~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~lV~  441 (705)
                      -|...+.||-|+||+|.++...++...+|+|.+++.+   +.+....++|-.||..-..+-||+|+-.+.+ ++.+|+||
T Consensus       630 mFvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVrLyySFQD-kdnLYFVM  708 (1034)
T KOG0608|consen  630 MFVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVRLYYSFQD-KDNLYFVM  708 (1034)
T ss_pred             ceEEEeeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEEEEEEecc-CCceEEEE
Confidence            4778889999999999999999998999999987653   4455678899999999999999999987776 88999999


Q ss_pred             eeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceec---
Q 005257          442 DYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMH---  518 (705)
Q Consensus       442 E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~---  518 (705)
                      ||++||++-.+|.+.+   .+.+..++-++.++..|+++.|.   .|+|||||||.|||||.+|++||.|||||.-+   
T Consensus       709 dYIPGGDmMSLLIrmg---IFeE~LARFYIAEltcAiesVHk---mGFIHRDiKPDNILIDrdGHIKLTDFGLCTGfRWT  782 (1034)
T KOG0608|consen  709 DYIPGGDMMSLLIRMG---IFEEDLARFYIAELTCAIESVHK---MGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWT  782 (1034)
T ss_pred             eccCCccHHHHHHHhc---cCHHHHHHHHHHHHHHHHHHHHh---ccceecccCccceEEccCCceeeeeccccccceec
Confidence            9999999999998765   68888888999999999999998   99999999999999999999999999998432   


Q ss_pred             ------CCCCcc---------------------------e-----eeeeeccccCCCccccccCCCCccccEEEEehhHH
Q 005257          519 ------GHGQVA---------------------------S-----TTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILIL  560 (705)
Q Consensus       519 ------~~~~~~---------------------------~-----~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~  560 (705)
                            ..+.-.                           .     ....+||+.|+|||++....++..+|.||.|||||
T Consensus       783 HdskYYq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r~g~~q~cdwws~gvil~  862 (1034)
T KOG0608|consen  783 HDSKYYQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLARTGYTQLCDWWSVGVILY  862 (1034)
T ss_pred             cccccccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcccCccccchhhHhhHHHH
Confidence                  110000                           0     01258999999999999999999999999999999


Q ss_pred             HHhhCCCCCCCCCc
Q 005257          561 EVLSGRRPIEEGKP  574 (705)
Q Consensus       561 ElltG~~Pf~~~~~  574 (705)
                      ||+.|+.||....+
T Consensus       863 em~~g~~pf~~~tp  876 (1034)
T KOG0608|consen  863 EMLVGQPPFLADTP  876 (1034)
T ss_pred             HHhhCCCCccCCCC
Confidence            99999999976544

>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]

Probab=99.96  E-value=3.4e-30  Score=257.87  Aligned_cols=287  Identities=20%  Similarity=0.224  Sum_probs=216.5

Q ss_pred             hCCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccC--CchhHHHHHHHHHHhccCCCCCcceeeeeeeec-----cC
Q 005257          363 TKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHE--NDGGTRAFLAEISSLGRLKHKSLVGLRGWCKRE-----KG  435 (705)
Q Consensus       363 t~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~--~~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~-----~~  435 (705)
                      ..+|.....+|.|.- .|..+.+.-.+++||+|++...  +....+.-.+|..++..+.|+|+++++.++...     ..
T Consensus        16 ~~Ry~nL~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~pf~n~~~akra~rel~l~~~v~~~nii~l~n~ftP~~~l~~~~   94 (369)
T KOG0665|consen   16 PKRYVNLKPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRPFQNQTHAKRAYRELKLMKCVNHKNIISLLNVFTPQKTLEEFQ   94 (369)
T ss_pred             eeeeeeecccCCCCc-eEEecchhhccCceehhhhcCccccCccchhhhhhhhhhhhhcccceeeeeeccCccccHHHHH
Confidence            346677778888888 7778888778899999988655  233445667899999999999999999988632     23


Q ss_pred             ceEEEEeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccc
Q 005257          436 SLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLA  515 (705)
Q Consensus       436 ~~~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla  515 (705)
                      ..|+|||+|. .+|...+.-     .+.-+.+..|..|++.|+.|||+   .+|+||||||+||++..+..+||.|||+|
T Consensus        95 e~y~v~e~m~-~nl~~vi~~-----elDH~tis~i~yq~~~~ik~lhs---~~IihRdLkPsnivv~~~~~lKi~dfg~a  165 (369)
T KOG0665|consen   95 EVYLVMELMD-ANLCQVILM-----ELDHETISYILYQMLCGIKHLHS---AGIIHRDLKPSNIVVNSDCTLKILDFGLA  165 (369)
T ss_pred             hHHHHHHhhh-hHHHHHHHH-----hcchHHHHHHHHHHHHHHHHHHh---cceeecccCcccceecchhheeeccchhh
Confidence            6799999995 589888862     46778888999999999999999   99999999999999999999999999999


Q ss_pred             eecCCCCcceeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhHHHHH
Q 005257          516 RMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDA  595 (705)
Q Consensus       516 ~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~  595 (705)
                      +.....  ...+..+.|..|.|||++.+..+.+.+||||.||++.||++|+..|.+.+ .+.+|-.           ++.
T Consensus       166 r~e~~~--~~mtpyVvtRyyrapevil~~~~ke~vdiwSvGci~gEli~~~Vlf~g~d-~idQ~~k-----------i~~  231 (369)
T KOG0665|consen  166 RTEDTD--FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELILGTVLFPGKD-HIDQWNK-----------IIE  231 (369)
T ss_pred             cccCcc--cccCchhheeeccCchheeccCCcccchhhhhhhHHHHHhhceEEecCch-HHHHHHH-----------HHH
Confidence            875543  34566788999999999998889999999999999999999999998533 2333321           111


Q ss_pred             hhhcCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHhcc-----ccCCCCCcchhhHHHHHHhhcccccccccc
Q 005257          596 RLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLEGKI-----EAGIENETEDMDAYLLQQVKSKDMWANYSR  670 (705)
Q Consensus       596 ~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r  670 (705)
                      .   .+..++.....+...+..-..    .||-...  -.+...+     +...+.+ .......-+++.++..-.|..|
T Consensus       232 ~---lgtpd~~F~~qL~~~~r~yv~----~~~~y~~--~~f~~~fpD~~f~~~~e~~-~~~~~~ardll~~MLvi~pe~R  301 (369)
T KOG0665|consen  232 Q---LGTPDPSFMKQLQPTVRNYVE----NRPQYQA--ISFSELFPDSLFPVVLEGS-KLDCSLARDLLSKMLVIDPEKR  301 (369)
T ss_pred             H---hcCCCHHHHHHhhHHHHHHhh----cChHhhc--cchhhhCCcccccccccCC-ccchHHHHHHHHHhhccChhhc
Confidence            1   255666777777777666554    2332221  1111111     1111222 1223445566778888999999


Q ss_pred             ccccCCCCCCCcc
Q 005257          671 SFGYGYATHPTFH  683 (705)
Q Consensus       671 ~~~~~~~~hp~f~  683 (705)
                      ..+.++|.||||+
T Consensus       302 isv~daL~HPY~~  314 (369)
T KOG0665|consen  302 ISVDDALRHPYIK  314 (369)
T ss_pred             ccHHHHhcCCeee
Confidence            9999999999997

>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]

Probab=99.96  E-value=8.3e-30  Score=282.05  Aligned_cols=244  Identities=29%  Similarity=0.434  Sum_probs=185.4

Q ss_pred             CCcceEEeecCceE-EEEEEEcCCCeEEEEEEeccCCchhHHHHHHHHHHhccC-CCCCcceeeeeeeeccCceEEEEee
Q 005257          366 FSEENVIGVGGNGK-VYKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRL-KHKSLVGLRGWCKREKGSLMLVYDY  443 (705)
Q Consensus       366 f~~~~~LG~G~fg~-Vy~~~~~~~~~~vavK~i~~~~~~~~~~~~~Ei~~l~~l-~Hpniv~l~g~~~~~~~~~~lV~E~  443 (705)
                      |...+++|.|+-|+ ||+|...  ++.||||++-.+   ...-..+|+..|+.- +|||||++++.-.+ ...+||+.|.
T Consensus       511 ~~~~eilG~Gs~Gt~Vf~G~ye--~R~VAVKrll~e---~~~~A~rEi~lL~eSD~H~NviRyyc~E~d-~qF~YIalEL  584 (903)
T KOG1027|consen  511 FSPKEILGYGSNGTVVFRGVYE--GREVAVKRLLEE---FFDFAQREIQLLQESDEHPNVIRYYCSEQD-RQFLYIALEL  584 (903)
T ss_pred             eccHHHcccCCCCcEEEEEeeC--CceehHHHHhhH---hHHHHHHHHHHHHhccCCCceEEEEeeccC-CceEEEEehH
Confidence            56677899999875 8999996  689999988433   223446899999888 69999999975443 5678999999


Q ss_pred             CCCCChhHHHHhc-CCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEcc---C--CCeeeeeecccee
Q 005257          444 MENGSLDKWIFQC-DGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDK---E--MNGRLGDFGLARM  517 (705)
Q Consensus       444 ~~~gsL~~~L~~~-~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~---~--~~~kL~DFGla~~  517 (705)
                      |. .+|.+++... .......-...+.++.|+++||++||+   .+||||||||.||||+.   +  .+++|+|||+++.
T Consensus       585 C~-~sL~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLHs---l~iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsKk  660 (903)
T KOG1027|consen  585 CA-CSLQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLHS---LKIVHRDLKPQNILISVPSADGTLRAKISDFGLSKK  660 (903)
T ss_pred             hh-hhHHHHHhccccchhhcccccHHHHHHHHHHHHHHHHh---cccccccCCCceEEEEccCCCcceeEEecccccccc
Confidence            95 5999999873 111122225667889999999999999   99999999999999975   2  5689999999998


Q ss_pred             cCCCCcce--eeeeeccccCCCccccccCCCCccccEEEEehhHHHHhhC-CCCCCCCCccHHHHHHHHHHhCch-hHHH
Q 005257          518 HGHGQVAS--TTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSG-RRPIEEGKPNLVEMVWELMVQGKL-LDAL  593 (705)
Q Consensus       518 ~~~~~~~~--~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG-~~Pf~~~~~~~~~~v~~~~~~~~~-~~~i  593 (705)
                      ...+....  .....||-+|+|||++....-+.++||||+|||+|..++| .+||.+......     .+..|.. +.. 
T Consensus       661 l~~~~sS~~r~s~~sGt~GW~APE~L~~~~~~~avDiFslGCvfyYvltgG~HpFGd~~~R~~-----NIl~~~~~L~~-  734 (903)
T KOG1027|consen  661 LAGGKSSFSRLSGGSGTSGWQAPEQLREDRKTQAVDIFSLGCVFYYVLTGGSHPFGDSLERQA-----NILTGNYTLVH-  734 (903)
T ss_pred             cCCCcchhhcccCCCCcccccCHHHHhccccCcccchhhcCceEEEEecCCccCCCchHHhhh-----hhhcCccceee-
Confidence            87654432  3446899999999999998888899999999999999994 999976422100     0111110 000 


Q ss_pred             HHhhhcCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHH
Q 005257          594 DARLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVK  634 (705)
Q Consensus       594 d~~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~  634 (705)
                             -....++  ...+|+..+++++|..||++.+|+.
T Consensus       735 -------L~~~~d~--eA~dLI~~ml~~dP~~RPsa~~VL~  766 (903)
T KOG1027|consen  735 -------LEPLPDC--EAKDLISRMLNPDPQLRPSATDVLN  766 (903)
T ss_pred             -------eccCchH--HHHHHHHHhcCCCcccCCCHHHHhC
Confidence                   0011122  6788999999999999999999975

>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]

Probab=99.96  E-value=2.8e-29  Score=263.85  Aligned_cols=312  Identities=19%  Similarity=0.197  Sum_probs=222.6

Q ss_pred             HHHhCCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCCchhHHHHHHHHHHhccCC------CCCcceeeeeeeec
Q 005257          360 EAATKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLK------HKSLVGLRGWCKRE  433 (705)
Q Consensus       360 ~~at~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~~~~~~~~~Ei~~l~~l~------Hpniv~l~g~~~~~  433 (705)
                      +..-.+|......|+|-|++|.+|.+..-|..||||+|... .-..+.=+.|+++|++|.      --|.++++-.|.. 
T Consensus       428 E~LD~RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnN-E~M~KtGl~EleiLkKL~~AD~Edk~Hclrl~r~F~h-  505 (752)
T KOG0670|consen  428 ELLDSRYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNN-EVMHKTGLKELEILKKLNDADPEDKFHCLRLFRHFKH-  505 (752)
T ss_pred             hhhcceeEEEeccccceeeeeeeccccCCCCeeEEEEeecc-hHHhhhhhHHHHHHHHhhccCchhhhHHHHHHHHhhh-
Confidence            34456788888899999999999999888899999999654 333445578999999995      3468888887765 


Q ss_pred             cCceEEEEeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCC-Ceeeeee
Q 005257          434 KGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEM-NGRLGDF  512 (705)
Q Consensus       434 ~~~~~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~-~~kL~DF  512 (705)
                      .+++|||+|-+ ..+|.++|++.+....|....+..++.|+.-||..|..   .+|+|.||||.|||+++.. .+|||||
T Consensus       506 knHLClVFE~L-slNLRevLKKyG~nvGL~ikaVRsYaqQLflALklLK~---c~vlHaDIKPDNiLVNE~k~iLKLCDf  581 (752)
T KOG0670|consen  506 KNHLCLVFEPL-SLNLREVLKKYGRNVGLHIKAVRSYAQQLFLALKLLKK---CGVLHADIKPDNILVNESKNILKLCDF  581 (752)
T ss_pred             cceeEEEehhh-hchHHHHHHHhCcccceeehHHHHHHHHHHHHHHHHHh---cCeeecccCccceEeccCcceeeeccC
Confidence            78999999998 46999999988777789999999999999999999998   9999999999999999765 5799999


Q ss_pred             ccceecCCCCcceeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhHH
Q 005257          513 GLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDA  592 (705)
Q Consensus       513 Gla~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~~  592 (705)
                      |.|-.......   +.+.-+..|.|||++.+.+|+...|+||.||.||||.||+..|++...+-.-.+ ..-..|++...
T Consensus       582 GSA~~~~enei---tPYLVSRFYRaPEIiLG~~yd~~iD~WSvgctLYElYtGkIlFpG~TNN~MLrl-~me~KGk~p~K  657 (752)
T KOG0670|consen  582 GSASFASENEI---TPYLVSRFYRAPEIILGLPYDYPIDTWSVGCTLYELYTGKILFPGRTNNQMLRL-FMELKGKFPNK  657 (752)
T ss_pred             ccccccccccc---cHHHHHHhccCcceeecCcccCCccceeeceeeEEeeccceecCCCCcHHHHHH-HHHhcCCCcHH
Confidence            99976654432   233457789999999999999999999999999999999999988655321111 11234444433


Q ss_pred             HHHh-hhcCCCCCHHHHH---HHHHHH-HHcCCCCCCCCCCHHHHHHHHHhccccCCCCCcchhhHHHHHHhhccccccc
Q 005257          593 LDAR-LRAKGGFDEDEVE---RVLHLG-LLCAYPDPRARPTMRQVVKVLEGKIEAGIENETEDMDAYLLQQVKSKDMWAN  667 (705)
Q Consensus       593 id~~-l~~~~~~~~~~~~---~l~~l~-~~Cl~~dP~~RPs~~evl~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  667 (705)
                      +-.. .-....++.++--   +.-.+- ..-..+-+.-.|| +++...|.+. + ....+..+....+.+++.++.+.+|
T Consensus       658 mlRKgqF~dqHFD~d~nf~~~e~D~vT~r~~~~vm~~vkPt-kdl~s~l~~~-q-~~~deq~~~~~~~rdLLdkml~LdP  734 (752)
T KOG0670|consen  658 MLRKGQFKDQHFDQDLNFLYIEVDKVTEREKRTVMVNVKPT-KDLGSELIAV-Q-RLPDEQPKIVQQLRDLLDKMLILDP  734 (752)
T ss_pred             HhhhcchhhhhcccccceEEEeccccccceeEEEecccCcc-hhHHHHHhcc-C-CCCchhHHHHHHHHHHHHHHhccCh
Confidence            2111 1000111111000   000000 0000011223343 3344444322 1 1223334456667888999999999


Q ss_pred             cccccccCCCCCCCccc
Q 005257          668 YSRSFGYGYATHPTFHD  684 (705)
Q Consensus       668 ~~r~~~~~~~~hp~f~~  684 (705)
                      ..|.+.-+||.||||..
T Consensus       735 ~KRit~nqAL~HpFi~~  751 (752)
T KOG0670|consen  735 EKRITVNQALKHPFITE  751 (752)
T ss_pred             hhcCCHHHHhcCCcccC
Confidence            99999999999999964

>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.96  E-value=2.3e-29  Score=251.72  Aligned_cols=246  Identities=24%  Similarity=0.361  Sum_probs=195.3

Q ss_pred             hCCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCC---chhHHHHHHHHHHhccC-CCCCcceeeeeeeeccCceE
Q 005257          363 TKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHEN---DGGTRAFLAEISSLGRL-KHKSLVGLRGWCKREKGSLM  438 (705)
Q Consensus       363 t~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~---~~~~~~~~~Ei~~l~~l-~Hpniv~l~g~~~~~~~~~~  438 (705)
                      .++|...++||+|+|.+|..+.++.+.+.+|+|+++++.   +++.+=...|-.+...- +||.+|.+..++.. +..++
T Consensus       249 l~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscfqt-esrlf  327 (593)
T KOG0695|consen  249 LQDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQT-ESRLF  327 (593)
T ss_pred             cccceeeeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhhcc-cceEE
Confidence            457899999999999999999999999999999998762   33333345566666555 69999999986665 77899


Q ss_pred             EEEeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceec
Q 005257          439 LVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMH  518 (705)
Q Consensus       439 lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~  518 (705)
                      +|.||++||+|--++.+   ...|+++.+.-+...|+.||.|||+   ++||.||||..|+|||..|.+||.|+|+++.-
T Consensus       328 fvieyv~ggdlmfhmqr---qrklpeeharfys~ei~lal~flh~---rgiiyrdlkldnvlldaeghikltdygmcke~  401 (593)
T KOG0695|consen  328 FVIEYVNGGDLMFHMQR---QRKLPEEHARFYSAEICLALNFLHE---RGIIYRDLKLDNVLLDAEGHIKLTDYGMCKEG  401 (593)
T ss_pred             EEEEEecCcceeeehhh---hhcCcHHHhhhhhHHHHHHHHHHhh---cCeeeeeccccceEEccCCceeecccchhhcC
Confidence            99999999999665543   2379999999999999999999999   99999999999999999999999999999864


Q ss_pred             CCCCcceeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhhCCCCCCC-----CCccHHHHHHHHHHhCchhHHH
Q 005257          519 GHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEE-----GKPNLVEMVWELMVQGKLLDAL  593 (705)
Q Consensus       519 ~~~~~~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~-----~~~~~~~~v~~~~~~~~~~~~i  593 (705)
                      -... ..+..++|||.|+|||++.+..|....|.|++||+++||+.|+.||+-     .+.+..+.+.+.+.+.      
T Consensus       402 l~~g-d~tstfcgtpnyiapeilrgeeygfsvdwwalgvlmfemmagrspfdivgm~n~d~ntedylfqvilek------  474 (593)
T KOG0695|consen  402 LGPG-DTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIVGMDNPDMNTEDYLFQVILEK------  474 (593)
T ss_pred             CCCC-cccccccCCCcccchhhhcccccCceehHHHHHHHHHHHHcCCCCcceecCCCcccchhHHHHHHHhhh------
Confidence            3322 234458999999999999999999999999999999999999999962     2233444444443322      


Q ss_pred             HHhhhcCCCCCHHHHHHHHHHHHHcCCCCCCCCCC
Q 005257          594 DARLRAKGGFDEDEVERVLHLGLLCAYPDPRARPT  628 (705)
Q Consensus       594 d~~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs  628 (705)
                        .++    ++.....+...+...-+++||.+|--
T Consensus       475 --qir----iprslsvkas~vlkgflnkdp~erlg  503 (593)
T KOG0695|consen  475 --QIR----IPRSLSVKASHVLKGFLNKDPKERLG  503 (593)
T ss_pred             --ccc----ccceeehhhHHHHHHhhcCCcHHhcC
Confidence              121    22233344566777788999998853

>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]

Probab=99.96  E-value=2.8e-30  Score=270.69  Aligned_cols=248  Identities=23%  Similarity=0.328  Sum_probs=202.0

Q ss_pred             CCcceEEeecCceEEEEEEEcCCCeEEEEEEeccC---CchhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEEEEe
Q 005257          366 FSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHE---NDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYD  442 (705)
Q Consensus       366 f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~---~~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~lV~E  442 (705)
                      +.....||-||||.|=++..+.....+|+|++++.   ...+.+....|-++|...+.|.||+++.-+.+ ...+|+.||
T Consensus       422 l~~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrLYrTfrd-~kyvYmLmE  500 (732)
T KOG0614|consen  422 LKRIATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVRLYRTFRD-SKYVYMLME  500 (732)
T ss_pred             hhhhhhcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHHHHHHhcc-chhhhhhHH
Confidence            33455699999999999998765555888887654   45566778999999999999999999998876 668899999


Q ss_pred             eCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecCCCC
Q 005257          443 YMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQ  522 (705)
Q Consensus       443 ~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~~~~  522 (705)
                      -|-||.|...|++.+   .+......-++..+.+|+.|||.   ++||.|||||+|.+||.+|-+||.|||.|+....+.
T Consensus       501 aClGGElWTiLrdRg---~Fdd~tarF~~acv~EAfeYLH~---k~iIYRDLKPENllLd~~Gy~KLVDFGFAKki~~g~  574 (732)
T KOG0614|consen  501 ACLGGELWTILRDRG---SFDDYTARFYVACVLEAFEYLHR---KGIIYRDLKPENLLLDNRGYLKLVDFGFAKKIGSGR  574 (732)
T ss_pred             hhcCchhhhhhhhcC---CcccchhhhhHHHHHHHHHHHHh---cCceeccCChhheeeccCCceEEeehhhHHHhccCC
Confidence            999999999997654   68888889999999999999998   999999999999999999999999999999887654


Q ss_pred             cceeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhHHHHHhhhcCCC
Q 005257          523 VASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRAKGG  602 (705)
Q Consensus       523 ~~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~l~~~~~  602 (705)
                        .+-.++||+.|.|||++.+...+.++|.||||+++|||++|++||...++-   .-...+..|     +|.     -.
T Consensus       575 --KTwTFcGTpEYVAPEIILnKGHD~avDyWaLGIli~ELL~G~pPFs~~dpm---ktYn~ILkG-----id~-----i~  639 (732)
T KOG0614|consen  575 --KTWTFCGTPEYVAPEIILNKGHDRAVDYWALGILIYELLTGSPPFSGVDPM---KTYNLILKG-----IDK-----IE  639 (732)
T ss_pred             --ceeeecCCcccccchhhhccCcchhhHHHHHHHHHHHHHcCCCCCCCCchH---HHHHHHHhh-----hhh-----hh
Confidence              345589999999999999999999999999999999999999999876541   112222222     221     12


Q ss_pred             CCHHHHHHHHHHHHHcCCCCCCCCCC-----HHHHHHH
Q 005257          603 FDEDEVERVLHLGLLCAYPDPRARPT-----MRQVVKV  635 (705)
Q Consensus       603 ~~~~~~~~l~~l~~~Cl~~dP~~RPs-----~~evl~~  635 (705)
                      ++........++++..+..+|.+|--     ..+|.++
T Consensus       640 ~Pr~I~k~a~~Lik~LCr~~P~ERLG~~~~gI~DIkkH  677 (732)
T KOG0614|consen  640 FPRRITKTATDLIKKLCRDNPTERLGYQKGGINDIKKH  677 (732)
T ss_pred             cccccchhHHHHHHHHHhcCcHhhhccccCChHHHHhh
Confidence            34444556778888888889999865     4555544

>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]

Probab=99.96  E-value=1.5e-28  Score=254.94  Aligned_cols=304  Identities=25%  Similarity=0.319  Sum_probs=222.2

Q ss_pred             HHHHhCCCCcceEEeecCceEEEEEEEcC---CCeEEEEEEeccCCchhHHHHHHHHHHhccCC-CCCcceeeeeeeecc
Q 005257          359 IEAATKGFSEENVIGVGGNGKVYKGVLEG---GGAEIAVKRISHENDGGTRAFLAEISSLGRLK-HKSLVGLRGWCKREK  434 (705)
Q Consensus       359 l~~at~~f~~~~~LG~G~fg~Vy~~~~~~---~~~~vavK~i~~~~~~~~~~~~~Ei~~l~~l~-Hpniv~l~g~~~~~~  434 (705)
                      +....+.|...++||+|.|++||++++..   .++.||+|.+...+  ....+.+|+++|..+. +.||+++.+++.. +
T Consensus        31 ~p~~~~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts--~p~ri~~El~~L~~~gG~~ni~~~~~~~rn-n  107 (418)
T KOG1167|consen   31 IPFISNAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTS--SPSRILNELEMLYRLGGSDNIIKLNGCFRN-N  107 (418)
T ss_pred             hhhhhhhhhhhccccccchhhhhhhhHhhhccccceEeeeeccccc--CchHHHHHHHHHHHhccchhhhcchhhhcc-C
Confidence            44456678899999999999999999876   67899999986543  3456889999999995 8999999996654 7


Q ss_pred             CceEEEEeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccC-CCeeeeeec
Q 005257          435 GSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKE-MNGRLGDFG  513 (705)
Q Consensus       435 ~~~~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~-~~~kL~DFG  513 (705)
                      +...+|+||++.....+++.      .++..++..+++.+..||.++|.   .|||||||||+|+|.+.. +.-.|.|||
T Consensus       108 d~v~ivlp~~~H~~f~~l~~------~l~~~~i~~Yl~~ll~Al~~~h~---~GIvHRDiKpsNFL~n~~t~rg~LvDFg  178 (418)
T KOG1167|consen  108 DQVAIVLPYFEHDRFRDLYR------SLSLAEIRWYLRNLLKALAHLHK---NGIVHRDIKPSNFLYNRRTQRGVLVDFG  178 (418)
T ss_pred             CeeEEEecccCccCHHHHHh------cCCHHHHHHHHHHHHHHhhhhhc---cCccccCCCccccccccccCCceEEech
Confidence            78999999999999999885      47788999999999999999998   999999999999999854 667999999


Q ss_pred             cceecCCC--------------Cc-----------------------------ceeeeeeccccCCCcccccc-CCCCcc
Q 005257          514 LARMHGHG--------------QV-----------------------------ASTTRVVGTVGYLAPEVFSS-GRASTQ  549 (705)
Q Consensus       514 la~~~~~~--------------~~-----------------------------~~~~~~~gt~~y~APE~~~~-~~~s~k  549 (705)
                      ||......              ..                             ......+||+||+|||++.. ...+++
T Consensus       179 LA~~~d~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~k~~~Qtta  258 (418)
T KOG1167|consen  179 LAQRYDGYQQTEHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGRPSERANRAGTPGFRAPEVLFRCPRQTTA  258 (418)
T ss_pred             hHHHHHhhhhhhhhhhhhcccCCccccCcccccccccccCCCCceeccCCCccceecccCCCCCCCchHHHhhccCcCCc
Confidence            99621100              00                             00112479999999999865 567999


Q ss_pred             ccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhHHHHHhhhcCCCCCHHHHHHHHHHHHHcCCCCCCCCCCH
Q 005257          550 TDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTM  629 (705)
Q Consensus       550 sDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~  629 (705)
                      +||||.||+++.+++++.||.....+....+ +.+.                .+...++.....+-..-+-..+..+|++
T Consensus       259 iDiws~GVI~Lslls~~~PFf~a~dd~~al~-ei~t----------------ifG~~~mrk~A~l~g~~~l~~ksn~~~~  321 (418)
T KOG1167|consen  259 IDIWSAGVILLSLLSRRYPFFKAKDDADALA-EIAT----------------IFGSAEMRKCAALPGRILLWQKSNIPTI  321 (418)
T ss_pred             cceeeccceeehhhccccccccCccccchHH-HHHH----------------HhChHHHHHHhhcCCceeeecccccccc
Confidence            9999999999999999999975433211111 1110                0111222222211111111233568888


Q ss_pred             HHHHHHHHhc-cccCCC---------CCcchhhHHHHHHhhccccccccccccccCCCCCCCcccccccccc
Q 005257          630 RQVVKVLEGK-IEAGIE---------NETEDMDAYLLQQVKSKDMWANYSRSFGYGYATHPTFHDIRQSNSY  691 (705)
Q Consensus       630 ~evl~~L~~~-~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~hp~f~~~~~~~~~  691 (705)
                      .++..-++.. .+..-.         ...+-.+...++++.+....+|.+|.++++||.||||++.-.....
T Consensus       322 ~e~~~~f~s~~~~~~~~~~q~n~~~~~~~d~~~~~~~dlLdk~le~np~kRitAEeALkHpFF~~~~~~~~~  393 (418)
T KOG1167|consen  322 PELRVNFETLHIESIYKSRQPNTEREIGSDVFPALLLDLLDKCLELNPQKRITAEDALKHPFFDEADRTERG  393 (418)
T ss_pred             HHHHhchhccChhhcccccccceeeccccccccHHHHHHHHHHccCChhhcccHHHHhcCcCCcchhhhhhh
Confidence            8888777665 232221         1112234567888888888999999999999999999876544443

>cd00180 PKc Catalytic domain of Protein Kinases

Probab=99.95  E-value=1.4e-27  Score=235.93  Aligned_cols=211  Identities=32%  Similarity=0.546  Sum_probs=183.6

Q ss_pred             EeecCceEEEEEEEcCCCeEEEEEEeccCCch-hHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEEEEeeCCCCChh
Q 005257          372 IGVGGNGKVYKGVLEGGGAEIAVKRISHENDG-GTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLD  450 (705)
Q Consensus       372 LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~~-~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~lV~E~~~~gsL~  450 (705)
                      ||+|++|.||++....+++.+++|++...... ..+.+.+|++.++.++|++++++++++.. ....++++||+++++|.
T Consensus         1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~-~~~~~~~~e~~~~~~l~   79 (215)
T cd00180           1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVFED-ENHLYLVMEYCEGGSLK   79 (215)
T ss_pred             CCcCCceEEEEEEecCCCcEEEEEEeccccchhHHHHHHHHHHHHHhcCCCCeeeEeeeeec-CCeEEEEEecCCCCcHH
Confidence            68999999999999888899999998765432 35678999999999999999999998876 57889999999999999


Q ss_pred             HHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEcc-CCCeeeeeeccceecCCCCcceeeee
Q 005257          451 KWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDK-EMNGRLGDFGLARMHGHGQVASTTRV  529 (705)
Q Consensus       451 ~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~-~~~~kL~DFGla~~~~~~~~~~~~~~  529 (705)
                      +++....  ..+++..+..++.+++.+|.+||+   .+++|+||+|.||+++. ++.++|+|||.+........ .....
T Consensus        80 ~~~~~~~--~~~~~~~~~~~~~~l~~~l~~lh~---~~~~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~~~~~~-~~~~~  153 (215)
T cd00180          80 DLLKENE--GKLSEDEILRILLQILEGLEYLHS---NGIIHRDLKPENILLDSDNGKVKLADFGLSKLLTSDKS-LLKTI  153 (215)
T ss_pred             HHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHh---CCeeccCCCHhhEEEeCCCCcEEEecCCceEEccCCcc-hhhcc
Confidence            9987643  258999999999999999999998   89999999999999999 89999999999987654321 12234


Q ss_pred             eccccCCCccccccC-CCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhHHHHHhhhcCCCCCHHHH
Q 005257          530 VGTVGYLAPEVFSSG-RASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRAKGGFDEDEV  608 (705)
Q Consensus       530 ~gt~~y~APE~~~~~-~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~l~~~~~~~~~~~  608 (705)
                      .+...|++||.+... ..+.+.|+|++|+++++|                                              
T Consensus       154 ~~~~~~~~pe~~~~~~~~~~~~D~~~lg~~~~~l----------------------------------------------  187 (215)
T cd00180         154 VGTPAYMAPEVLLGKGYYSEKSDIWSLGVILYEL----------------------------------------------  187 (215)
T ss_pred             cCCCCccChhHhcccCCCCchhhhHHHHHHHHHH----------------------------------------------
Confidence            578899999999877 788999999999999999                                              


Q ss_pred             HHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 005257          609 ERVLHLGLLCAYPDPRARPTMRQVVKV  635 (705)
Q Consensus       609 ~~l~~l~~~Cl~~dP~~RPs~~evl~~  635 (705)
                      ..+.+++..|++.+|++||++.++++.
T Consensus       188 ~~~~~~l~~~l~~~p~~R~~~~~l~~~  214 (215)
T cd00180         188 PELKDLIRKMLQKDPEKRPSAKEILEH  214 (215)
T ss_pred             HHHHHHHHHHhhCCcccCcCHHHHhhC
Confidence            356788899999999999999999875

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which

>smart00221 STYKc Protein kinase; unclassified specificity

Probab=99.95  E-value=4.9e-27  Score=236.13  Aligned_cols=200  Identities=35%  Similarity=0.519  Sum_probs=174.6

Q ss_pred             CCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCCch-hHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEEEEeeC
Q 005257          366 FSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDG-GTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYM  444 (705)
Q Consensus       366 f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~~-~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~lV~E~~  444 (705)
                      |...+.||+|++|.||++...++++.+|+|.+...... ..+.+.+|++.+.+++|+|++++++++.. ....++++||+
T Consensus         1 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~-~~~~~~v~e~~   79 (225)
T smart00221        1 YELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTEKQREEFLREIRILKKLKHPNIVKLYGVFED-PEPLYLVMEYC   79 (225)
T ss_pred             CceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccchHHHHHHHHHHHHHHhCCCCChhhheeeeec-CCceEEEEecc
Confidence            45678899999999999999988899999999766554 67789999999999999999999998876 56889999999


Q ss_pred             CCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecCCCCcc
Q 005257          445 ENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVA  524 (705)
Q Consensus       445 ~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~~~~~~  524 (705)
                      ++++|.+++.....  .+++..+..++.+++.+|.+||+   .+++|+||+|+||+++.++.++|+|||++.........
T Consensus        80 ~~~~L~~~~~~~~~--~~~~~~~~~~~~~l~~~l~~lh~---~~i~h~di~~~ni~v~~~~~~~l~d~g~~~~~~~~~~~  154 (225)
T smart00221       80 EGGDLFDYLRKKGG--KLSEEEARFYLRQILEALEYLHS---LGIVHRDLKPENILLGMDGLVKLADFGLARFIHRDLAA  154 (225)
T ss_pred             CCCCHHHHHHhccc--CCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEcCCCCEEEeeCceeeEecCcccc
Confidence            99999999976432  17899999999999999999998   89999999999999999999999999999877654311


Q ss_pred             eeeeeeccccCCCcccc-ccCCCCccccEEEEehhHHHHhhCCCCCCC
Q 005257          525 STTRVVGTVGYLAPEVF-SSGRASTQTDVFGFGILILEVLSGRRPIEE  571 (705)
Q Consensus       525 ~~~~~~gt~~y~APE~~-~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~  571 (705)
                      ......++..|++||.+ ....++.++|||+||++++||++|+.||..
T Consensus       155 ~~~~~~~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~~~~l~~g~~pf~~  202 (225)
T smart00221      155 LLKTVKGTPFYLAPEVLLGGKGYGEAVDIWSLGVILYELLWGPEPFSG  202 (225)
T ss_pred             cccceeccCCcCCHhHhcCCCCCCchhhHHHHHHHHHHHHHCCCCccc
Confidence            22335678899999998 666788899999999999999999999965

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.

>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]

Probab=99.95  E-value=3.7e-28  Score=258.58  Aligned_cols=198  Identities=28%  Similarity=0.416  Sum_probs=171.6

Q ss_pred             CCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCC---chhHH-----HHHHHHHHhccCC---CCCcceeeeeeee
Q 005257          364 KGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHEN---DGGTR-----AFLAEISSLGRLK---HKSLVGLRGWCKR  432 (705)
Q Consensus       364 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~---~~~~~-----~~~~Ei~~l~~l~---Hpniv~l~g~~~~  432 (705)
                      ..|...+.||.|+||.|+.|+++.+...|+||.+.+++   +.+.+     ..-.||.+|.+|+   |+||++++.++.+
T Consensus       561 s~yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdfFEd  640 (772)
T KOG1152|consen  561 SDYTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDFFED  640 (772)
T ss_pred             ccceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhheeec
Confidence            35888999999999999999999999999999987652   12222     3567999999997   9999999998876


Q ss_pred             ccCceEEEEeeC-CCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeee
Q 005257          433 EKGSLMLVYDYM-ENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGD  511 (705)
Q Consensus       433 ~~~~~~lV~E~~-~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~D  511 (705)
                       ++.+||+||-. ++.+|.+++....   .+++.+..-|++||+.|+++||+   ++|||||||-+||.++.+|-+||+|
T Consensus       641 -dd~yyl~te~hg~gIDLFd~IE~kp---~m~E~eAk~IFkQV~agi~hlh~---~~ivhrdikdenvivd~~g~~klid  713 (772)
T KOG1152|consen  641 -DDYYYLETEVHGEGIDLFDFIEFKP---RMDEPEAKLIFKQVVAGIKHLHD---QGIVHRDIKDENVIVDSNGFVKLID  713 (772)
T ss_pred             -CCeeEEEecCCCCCcchhhhhhccC---ccchHHHHHHHHHHHhccccccc---cCceecccccccEEEecCCeEEEee
Confidence             77889999987 5678999996543   68999999999999999999999   9999999999999999999999999


Q ss_pred             eccceecCCCCcceeeeeeccccCCCccccccCCC-CccccEEEEehhHHHHhhCCCCCCC
Q 005257          512 FGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRA-STQTDVFGFGILILEVLSGRRPIEE  571 (705)
Q Consensus       512 FGla~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~-s~ksDVwS~Gvvl~ElltG~~Pf~~  571 (705)
                      ||.|.....+..   ..++||.+|.|||++.+.+| ...-|||++|++||.++....||.+
T Consensus       714 fgsaa~~ksgpf---d~f~gtv~~aapevl~g~~y~gk~qdiwalgillytivykenpyyn  771 (772)
T KOG1152|consen  714 FGSAAYTKSGPF---DVFVGTVDYAAPEVLGGEKYLGKPQDIWALGILLYTIVYKENPYYN  771 (772)
T ss_pred             ccchhhhcCCCc---ceeeeeccccchhhhCCCccCCCcchhhhhhheeeEEEeccCCCcC
Confidence            999987655433   34789999999999999876 5678999999999999999999853

>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]

Probab=99.95  E-value=2.2e-28  Score=264.20  Aligned_cols=254  Identities=26%  Similarity=0.357  Sum_probs=206.4

Q ss_pred             hCCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCCchhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEEEEe
Q 005257          363 TKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYD  442 (705)
Q Consensus       363 t~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~lV~E  442 (705)
                      .++|.....+|.|.||.|||+++..+++..|+|.++.+......-..+|+-+++..+||||+.++|-+.. ...++++||
T Consensus        14 ~ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkLep~dd~~~iqqei~~~~dc~h~nivay~gsylr-~dklwicME   92 (829)
T KOG0576|consen   14 QDDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEPGDDFSGIQQEIGMLRDCRHPNIVAYFGSYLR-RDKLWICME   92 (829)
T ss_pred             ccchhheeeecCCcccchhhhcccccCchhhheeeeccCCccccccccceeeeecCCCcChHHHHhhhhh-hcCcEEEEE
Confidence            3567788999999999999999999999999999998877777778899999999999999999998876 678999999


Q ss_pred             eCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecCCCC
Q 005257          443 YMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQ  522 (705)
Q Consensus       443 ~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~~~~  522 (705)
                      ||.+|+|.+.-+-   ..++++.++..+++...+||+|||+   ++-+|||||-.|||+++.|.+|++|||.+-.+...-
T Consensus        93 ycgggslQdiy~~---TgplselqiayvcRetl~gl~ylhs---~gk~hRdiKGanilltd~gDvklaDfgvsaqitati  166 (829)
T KOG0576|consen   93 YCGGGSLQDIYHV---TGPLSELQIAYVCRETLQGLKYLHS---QGKIHRDIKGANILLTDEGDVKLADFGVSAQITATI  166 (829)
T ss_pred             ecCCCcccceeee---cccchhHHHHHHHhhhhccchhhhc---CCcccccccccceeecccCceeecccCchhhhhhhh
Confidence            9999999987653   3379999999999999999999998   999999999999999999999999999987664332


Q ss_pred             cceeeeeeccccCCCcccc---ccCCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhHHHHHhhhc
Q 005257          523 VASTTRVVGTVGYLAPEVF---SSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRA  599 (705)
Q Consensus       523 ~~~~~~~~gt~~y~APE~~---~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~l~~  599 (705)
                       .....++||+.|||||+.   ..+.|..++|||++|+...|+.--..|..+..+.-   +..++.+....   .+.++.
T Consensus       167 -~KrksfiGtpywmapEvaaverkggynqlcdiwa~gitAiel~eLqpplfdlhpmr---~l~LmTkS~~q---pp~lkD  239 (829)
T KOG0576|consen  167 -AKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPLFDLHPMR---ALFLMTKSGFQ---PPTLKD  239 (829)
T ss_pred             -hhhhcccCCccccchhHHHHHhcccccccccccccccchhhhhhcCCcccccchHH---HHHHhhccCCC---CCcccC
Confidence             233457999999999986   45679999999999999999988777766544311   11112111110   011221


Q ss_pred             CCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHH
Q 005257          600 KGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVK  634 (705)
Q Consensus       600 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~  634 (705)
                      +    ....+.+-++++.|+..+|.+||++..+++
T Consensus       240 k----~kws~~fh~fvK~altknpKkRptaeklL~  270 (829)
T KOG0576|consen  240 K----TKWSEFFHNFVKGALTKNPKKRPTAEKLLQ  270 (829)
T ss_pred             C----ccchHHHHHHHHHHhcCCCccCCChhhhee
Confidence            1    223466888999999999999999987765

>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]

Probab=99.93  E-value=2.7e-26  Score=224.68  Aligned_cols=252  Identities=20%  Similarity=0.305  Sum_probs=191.5

Q ss_pred             hCCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCCchhHHHHHHHHHHhccC-CCCCcceeeeeeeeccCceEEEE
Q 005257          363 TKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRL-KHKSLVGLRGWCKREKGSLMLVY  441 (705)
Q Consensus       363 t~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~~~~~~~~~Ei~~l~~l-~Hpniv~l~g~~~~~~~~~~lV~  441 (705)
                      .+.|.+.+.||+|.||.+-++.++.+...+++|-+.... ...++|.+|..---.| .|.||+.-+.+..+..+.+.+++
T Consensus        23 ~d~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p~-tt~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt~d~YvF~q  101 (378)
T KOG1345|consen   23 EDVYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPRPQ-TTQADFVREFHYSFFLSPHQHIIDTYEVAFQTSDAYVFVQ  101 (378)
T ss_pred             hhhhhHHHHhcccceeeEEeeeccCCceEEEeeccCcch-hhHHHHHHHhccceeeccchhhhHHHHHHhhcCceEEEee
Confidence            456888999999999999999999999999999986553 3467899998876666 59999998887776677888999


Q ss_pred             eeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEc--cCCCeeeeeeccceecC
Q 005257          442 DYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLD--KEMNGRLGDFGLARMHG  519 (705)
Q Consensus       442 E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld--~~~~~kL~DFGla~~~~  519 (705)
                      ||++.|+|..-+...    .+.+....+++.|+++||.|+|+   .++||||||.+||||-  +..++||||||+.+..+
T Consensus       102 E~aP~gdL~snv~~~----GigE~~~K~v~~ql~SAi~fMHs---knlVHRdlK~eNiLif~~df~rvKlcDFG~t~k~g  174 (378)
T KOG1345|consen  102 EFAPRGDLRSNVEAA----GIGEANTKKVFAQLLSAIEFMHS---KNLVHRDLKAENILIFDADFYRVKLCDFGLTRKVG  174 (378)
T ss_pred             ccCccchhhhhcCcc----cccHHHHHHHHHHHHHHHHHhhc---cchhhcccccceEEEecCCccEEEeeecccccccC
Confidence            999999998877432    47888899999999999999999   9999999999999993  33579999999987543


Q ss_pred             CCCcceeeeeeccccCCCccccccC-----CCCccccEEEEehhHHHHhhCCCCCCCCCc-cHHHHHHHHHHhCchhHHH
Q 005257          520 HGQVASTTRVVGTVGYLAPEVFSSG-----RASTQTDVFGFGILILEVLSGRRPIEEGKP-NLVEMVWELMVQGKLLDAL  593 (705)
Q Consensus       520 ~~~~~~~~~~~gt~~y~APE~~~~~-----~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~-~~~~~v~~~~~~~~~~~~i  593 (705)
                      ..-    ...--+..|.+||.....     ...+.+|||.||++++.++||..||+.... +..-|-|..+.+++... +
T Consensus       175 ~tV----~~~~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQka~~~d~~Y~~~~~w~~rk~~~-~  249 (378)
T KOG1345|consen  175 TTV----KYLEYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQKASIMDKPYWEWEQWLKRKNPA-L  249 (378)
T ss_pred             cee----hhhhhhcccCCcHHHhhccccceEecccccchheeeeeeeeecCCCcchhhhccCchHHHHHHHhcccCcc-C
Confidence            211    111235679999987542     357789999999999999999999984321 22234455565555431 1


Q ss_pred             HHhhhcCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHH
Q 005257          594 DARLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVK  634 (705)
Q Consensus       594 d~~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~  634 (705)
                      ....   .    ...+.++.+..+-+.++|++|=...++.+
T Consensus       250 P~~F---~----~fs~~a~r~Fkk~lt~~~~drcki~~~kk  283 (378)
T KOG1345|consen  250 PKKF---N----PFSEKALRLFKKSLTPRFKDRCKIWTAKK  283 (378)
T ss_pred             chhh---c----ccCHHHHHHHHHhcCCcccccchhHHHHH
Confidence            1111   1    12355677778889999999944444444

>PLN00181 protein SPA1-RELATED; Provisional

Probab=99.92  E-value=3.7e-26  Score=272.95  Aligned_cols=198  Identities=17%  Similarity=0.254  Sum_probs=141.5

Q ss_pred             ccCCC-CCcceeeeeeee------ccCceEEEEeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCC
Q 005257          416 GRLKH-KSLVGLRGWCKR------EKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKK  488 (705)
Q Consensus       416 ~~l~H-pniv~l~g~~~~------~~~~~~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~  488 (705)
                      +.++| +||++++++|..      ....+++++||+ +++|.++|....  ..+++.+++.++.||++||.|||+   ++
T Consensus        27 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~al~~lH~---~g  100 (793)
T PLN00181         27 KSLSHIDYVRSLLGSHKEGNLDGLDDDSIVRALECE-DVSLRQWLDNPD--RSVDAFECFHVFRQIVEIVNAAHS---QG  100 (793)
T ss_pred             chhhHHHHHHHhhcccCCccccccccchhhhhhccC-CccHHHHHhccc--ccccHHHHHHHHHHHHHHHHHHHh---CC
Confidence            34556 688888887721      124577889988 569999996432  359999999999999999999998   99


Q ss_pred             eeecCCCCCCeEEcc-------------------CCCeeeeeeccceecCCCC---------------cceeeeeecccc
Q 005257          489 VLHRDIKSSNVLLDK-------------------EMNGRLGDFGLARMHGHGQ---------------VASTTRVVGTVG  534 (705)
Q Consensus       489 iiHrDLkp~NILld~-------------------~~~~kL~DFGla~~~~~~~---------------~~~~~~~~gt~~  534 (705)
                      |+||||||+||||+.                   ++.+||+|||+++......               .......+||+.
T Consensus       101 IvHrDlKP~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~  180 (793)
T PLN00181        101 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEMSW  180 (793)
T ss_pred             eeeccCCchhEEEcccCcEEEeeccccCcccccccCcccccccccccccccccccchhhhhccccCCCcccccccCCCcc
Confidence            999999999999954                   4556777777775422100               000112468999


Q ss_pred             CCCccccccCCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhHHHHHhhhcCCCCCHHHHHHHHHH
Q 005257          535 YLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRAKGGFDEDEVERVLHL  614 (705)
Q Consensus       535 y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~l~~~~~~~~~~~~~l~~l  614 (705)
                      |||||++.+..++.++|||||||+||||++|..|+......     ...+....    +.+       ...........+
T Consensus       181 Y~APE~~~~~~~~~~sDVwSlGviL~ELl~~~~~~~~~~~~-----~~~~~~~~----~~~-------~~~~~~~~~~~~  244 (793)
T PLN00181        181 YTSPEEDNGSSSNCASDVYRLGVLLFELFCPVSSREEKSRT-----MSSLRHRV----LPP-------QILLNWPKEASF  244 (793)
T ss_pred             eEChhhhccCCCCchhhhhhHHHHHHHHhhCCCchhhHHHH-----HHHHHHhh----cCh-------hhhhcCHHHHHH
Confidence            99999999999999999999999999999988886532111     01111000    000       001122345678


Q ss_pred             HHHcCCCCCCCCCCHHHHHHH
Q 005257          615 GLLCAYPDPRARPTMRQVVKV  635 (705)
Q Consensus       615 ~~~Cl~~dP~~RPs~~evl~~  635 (705)
                      +.+||+++|.+||++.|++++
T Consensus       245 ~~~~L~~~P~~Rps~~eil~h  265 (793)
T PLN00181        245 CLWLLHPEPSCRPSMSELLQS  265 (793)
T ss_pred             HHHhCCCChhhCcChHHHhhc
Confidence            889999999999999999874

>smart00750 KIND kinase non-catalytic C-lobe domain

Probab=99.91  E-value=2.6e-24  Score=209.25  Aligned_cols=168  Identities=21%  Similarity=0.183  Sum_probs=126.1

Q ss_pred             CChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecCCCCccee
Q 005257          447 GSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVAST  526 (705)
Q Consensus       447 gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~~~~~~~~  526 (705)
                      |+|.+++...+.  .+++.+++.++.|++.||.|||+   .+      ||+|||++.++.+|+  ||+++......    
T Consensus         1 GsL~~~l~~~~~--~l~~~~~~~i~~qi~~~L~~lH~---~~------kp~Nil~~~~~~~~~--fG~~~~~~~~~----   63 (176)
T smart00750        1 VSLADILEVRGR--PLNEEEIWAVCLQCLRALRELHR---QA------KSGNILLTWDGLLKL--DGSVAFKTPEQ----   63 (176)
T ss_pred             CcHHHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHHh---cC------CcccEeEcCccceee--ccceEeecccc----
Confidence            689999975432  69999999999999999999998   44      999999999999999  99998764422    


Q ss_pred             eeeeccccCCCccccccCCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhHHHHHhhhcCCCCCHH
Q 005257          527 TRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRAKGGFDED  606 (705)
Q Consensus       527 ~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~l~~~~~~~~~  606 (705)
                        ..||+.|||||++.+..++.++|||||||++|||++|+.||..... ...........      ..............
T Consensus        64 --~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p~~~~~~-~~~~~~~~~~~------~~~~~~~~~~~~~~  134 (176)
T smart00750       64 --SRVDPYFMAPEVIQGQSYTEKADIYSLGITLYEALDYELPYNEERE-LSAILEILLNG------MPADDPRDRSNLES  134 (176)
T ss_pred             --CCCcccccChHHhcCCCCcchhhHHHHHHHHHHHHhCCCCccccch-hcHHHHHHHHH------hccCCccccccHHH
Confidence              2589999999999999999999999999999999999999965332 11111111100      00000000001112


Q ss_pred             HHH--HHHHHHHHcCCCCCCCCCCHHHHHHHHHhcc
Q 005257          607 EVE--RVLHLGLLCAYPDPRARPTMRQVVKVLEGKI  640 (705)
Q Consensus       607 ~~~--~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~  640 (705)
                      ...  .+.+++..||+.+|.+||++.|+++++....
T Consensus       135 ~~~~~~~~~~i~~cl~~~p~~Rp~~~~ll~~~~~~~  170 (176)
T smart00750      135 VSAARSFADFMRVCASRLPQRREAANHYLAHCRALF  170 (176)
T ss_pred             HHhhhhHHHHHHHHHhcccccccCHHHHHHHHHHHH
Confidence            222  5899999999999999999999999887543

It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features

>PRK09188 serine/threonine protein kinase; Provisional

Probab=99.90  E-value=1.8e-23  Score=224.12  Aligned_cols=179  Identities=20%  Similarity=0.202  Sum_probs=137.9

Q ss_pred             HHHHHhCCCCcceEEeecCceEEEEEEEcC-CCeEEEEEEeccC-----CchhHHHHHHHHHHhccCCCCCcceeeeeee
Q 005257          358 EIEAATKGFSEENVIGVGGNGKVYKGVLEG-GGAEIAVKRISHE-----NDGGTRAFLAEISSLGRLKHKSLVGLRGWCK  431 (705)
Q Consensus       358 el~~at~~f~~~~~LG~G~fg~Vy~~~~~~-~~~~vavK~i~~~-----~~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~  431 (705)
                      .......+|...+.||+|+||+||+|++.. +++.||||++...     .....+.|.+|+++|++++|+|+++.+..  
T Consensus        12 ~~~~~~~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~--   89 (365)
T PRK09188         12 QIPALSARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLA--   89 (365)
T ss_pred             ccccccCCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEE--
Confidence            344567789999999999999999999875 6777899987533     12235568999999999999999864432  


Q ss_pred             eccCceEEEEeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCC-CCCCeEEccCCCeeee
Q 005257          432 REKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDI-KSSNVLLDKEMNGRLG  510 (705)
Q Consensus       432 ~~~~~~~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDL-kp~NILld~~~~~kL~  510 (705)
                        .+..+|||||+++++|... .  .    ..   ...++.|++++|.|||+   ++|+|||| ||+|||++.++.+||+
T Consensus        90 --~~~~~LVmE~~~G~~L~~~-~--~----~~---~~~~~~~i~~aL~~lH~---~gIiHrDL~KP~NILv~~~~~ikLi  154 (365)
T PRK09188         90 --TGKDGLVRGWTEGVPLHLA-R--P----HG---DPAWFRSAHRALRDLHR---AGITHNDLAKPQNWLMGPDGEAAVI  154 (365)
T ss_pred             --cCCcEEEEEccCCCCHHHh-C--c----cc---hHHHHHHHHHHHHHHHH---CCCeeCCCCCcceEEEcCCCCEEEE
Confidence              2357999999999999632 1  1    11   14678999999999998   99999999 9999999999999999


Q ss_pred             eeccceecCCCCcce-------eeeeeccccCCCccccccCC------CCccccEE
Q 005257          511 DFGLARMHGHGQVAS-------TTRVVGTVGYLAPEVFSSGR------ASTQTDVF  553 (705)
Q Consensus       511 DFGla~~~~~~~~~~-------~~~~~gt~~y~APE~~~~~~------~s~ksDVw  553 (705)
                      |||+|+.+.......       .+...+++.|+|||.+....      .+..+|-|
T Consensus       155 DFGlA~~~~~~~~~~~~~~~~d~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~~dgW  210 (365)
T PRK09188        155 DFQLASVFRRRGALYRIAAYEDLRHLLKHKRTYAPDALTPRERKILARKSLPSRIW  210 (365)
T ss_pred             ECccceecccCcchhhhhhhhhhhhhhccCccCCcccCChhhhccccccccccCcE
Confidence            999998765432111       13467888999999986532      23446666

>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]

Probab=99.88  E-value=1.4e-23  Score=205.32  Aligned_cols=245  Identities=21%  Similarity=0.385  Sum_probs=187.2

Q ss_pred             eEEeecCceEEEEEEEcCCCeEEEEEEeccC--CchhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEEEEeeCCCC
Q 005257          370 NVIGVGGNGKVYKGVLEGGGAEIAVKRISHE--NDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENG  447 (705)
Q Consensus       370 ~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~--~~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~lV~E~~~~g  447 (705)
                      .+|.+...|..|+|+++++  .+++|++...  .....++|..|.-.|+-+.||||++++|.|.. ...+.++..||+.|
T Consensus       196 tkl~e~hsgelwrgrwqgn--divakil~vr~~t~risrdfneefp~lrifshpnilpvlgacns-ppnlv~isq~mp~g  272 (448)
T KOG0195|consen  196 TKLAESHSGELWRGRWQGN--DIVAKILNVREVTARISRDFNEEFPALRIFSHPNILPVLGACNS-PPNLVIISQYMPFG  272 (448)
T ss_pred             hhhccCCCcccccccccCc--chhhhhhhhhhcchhhcchhhhhCcceeeecCCchhhhhhhccC-CCCceEeeeeccch
Confidence            4578889999999999854  4666766433  33445789999999999999999999999987 57889999999999


Q ss_pred             ChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeee--eeccceecCCCCcce
Q 005257          448 SLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLG--DFGLARMHGHGQVAS  525 (705)
Q Consensus       448 sL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~--DFGla~~~~~~~~~~  525 (705)
                      +|..+|+...+ ......+..+++.++|+|++|||+ .++-|.---|.+..+++|++.+++|+  |--.+-.        
T Consensus       273 slynvlhe~t~-vvvd~sqav~faldiargmaflhs-lep~ipr~~lns~hvmidedltarismad~kfsfq--------  342 (448)
T KOG0195|consen  273 SLYNVLHEQTS-VVVDHSQAVRFALDIARGMAFLHS-LEPMIPRFYLNSKHVMIDEDLTARISMADTKFSFQ--------  342 (448)
T ss_pred             HHHHHHhcCcc-EEEecchHHHHHHHHHhhHHHHhh-cchhhhhhhcccceEEecchhhhheecccceeeee--------
Confidence            99999987543 367888999999999999999997 33445556799999999999998875  2111110        


Q ss_pred             eeeeeccccCCCccccccCCC---CccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhHHHHHhhhcCCC
Q 005257          526 TTRVVGTVGYLAPEVFSSGRA---STQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRAKGG  602 (705)
Q Consensus       526 ~~~~~gt~~y~APE~~~~~~~---s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~l~~~~~  602 (705)
                      .....-.+.||+||.++..+.   -.++|+|||.+++|||.|...||.+-.+-....  ..         .-+.++  ..
T Consensus       343 e~gr~y~pawmspealqrkped~n~raadmwsfaillwel~trevpfadlspmecgm--ki---------aleglr--v~  409 (448)
T KOG0195|consen  343 EVGRAYSPAWMSPEALQRKPEDLNIRAADMWSFAILLWELNTREVPFADLSPMECGM--KI---------ALEGLR--VH  409 (448)
T ss_pred             ccccccCcccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhccccccccCCchhhhh--hh---------hhcccc--cc
Confidence            111123678999999977543   457999999999999999999998754421111  01         111222  33


Q ss_pred             CCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHhcc
Q 005257          603 FDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLEGKI  640 (705)
Q Consensus       603 ~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~  640 (705)
                      +++.....+.+|+.-|++.||.+||.+..++-+|+++.
T Consensus       410 ippgis~hm~klm~icmnedpgkrpkfdmivpilekm~  447 (448)
T KOG0195|consen  410 IPPGISRHMNKLMNICMNEDPGKRPKFDMIVPILEKMI  447 (448)
T ss_pred             CCCCccHHHHHHHHHHhcCCCCcCCCcceehhhHHHhc
Confidence            45566677889999999999999999999999998653

>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=99.87  E-value=8.7e-22  Score=210.76  Aligned_cols=261  Identities=21%  Similarity=0.208  Sum_probs=192.8

Q ss_pred             CCCcceEEeecCceEEEEEEEcCCC-eEEEEEEeccCCchhHHHHHHHHHHhccCCC----CCcceeeeeeeeccCceEE
Q 005257          365 GFSEENVIGVGGNGKVYKGVLEGGG-AEIAVKRISHENDGGTRAFLAEISSLGRLKH----KSLVGLRGWCKREKGSLML  439 (705)
Q Consensus       365 ~f~~~~~LG~G~fg~Vy~~~~~~~~-~~vavK~i~~~~~~~~~~~~~Ei~~l~~l~H----pniv~l~g~~~~~~~~~~l  439 (705)
                      +|...+.||+|+||.||++.....+ ..+|+|............+..|+.++..+..    +++..++......+...++
T Consensus        19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~~~~~~i   98 (322)
T KOG1164|consen   19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKPSVLKIEIQVLKKLEKKNGPSHFPKLLDHGRSTEDFNFI   98 (322)
T ss_pred             ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCCCccchhHHHHHHHHhhhcCCCCCCEEEEeccCCCceeEE
Confidence            7899999999999999999987664 6799998766544333367888888888863    4677777765333556799


Q ss_pred             EEeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccC-----CCeeeeeecc
Q 005257          440 VYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKE-----MNGRLGDFGL  514 (705)
Q Consensus       440 V~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~-----~~~kL~DFGl  514 (705)
                      ||+.+ |.+|.++..... ...++....++|+.|++.+|.+||+   .+++||||||.|+++...     ..+.|.|||+
T Consensus        99 VM~l~-G~sL~dl~~~~~-~~~fs~~T~l~ia~q~l~~l~~lH~---~G~iHRDiKp~N~~~g~~~~~~~~~~~llDfGl  173 (322)
T KOG1164|consen   99 VMSLL-GPSLEDLRKRNP-PGRFSRKTVLRIAIQNLNALEDLHS---KGFIHRDIKPENFVVGQSSRSEVRTLYLLDFGL  173 (322)
T ss_pred             EEecc-CccHHHHHHhCC-CCCcCHhHHHHHHHHHHHHHHHHHh---cCcccCCcCHHHeeecCCCCcccceEEEEecCC
Confidence            99998 779999876655 3479999999999999999999998   999999999999999865     4589999999


Q ss_pred             ce--ecCCCCc-----c-e-eeeeeccccCCCccccccCCCCccccEEEEehhHHHHhhCCCCCCCCCcc-HHHHHHHHH
Q 005257          515 AR--MHGHGQV-----A-S-TTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPN-LVEMVWELM  584 (705)
Q Consensus       515 a~--~~~~~~~-----~-~-~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~-~~~~v~~~~  584 (705)
                      ++  .+.....     . . .....||..|.++.+..+.+.+.+.|+||++.++.|+..|..||...... ....+....
T Consensus       174 ar~~~~~~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~~e~~r~DDles~~Y~l~el~~g~LPW~~~~~~~~~~~~~~~~  253 (322)
T KOG1164|consen  174 ARRFKYVGDSGGNLRPPRPQKGLFRGTLRYASINVHLGIEQGRRDDLESLFYMLLELLKGSLPWEALEMTDLKSKFEKDP  253 (322)
T ss_pred             CccccccCCCCcccccCCCCccCCCCccccccHHHhCCCccCCchhhhhHHHHHHHHhcCCCCCccccccchHHHHHHHh
Confidence            98  3322111     1 1 12356999999999999999999999999999999999999999654321 111110000


Q ss_pred             HhCchhHHHHHhhhcCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHhccc
Q 005257          585 VQGKLLDALDARLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLEGKIE  641 (705)
Q Consensus       585 ~~~~~~~~id~~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~  641 (705)
                               .....  .......+..+.++...+-..+..++|....+...|.+...
T Consensus       254 ---------~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~Pdy~~~~~~l~~~~~  299 (322)
T KOG1164|consen  254 ---------RKLLT--DRFGDLKPEEFAKILEYIDSLDYEDKPDYEKLAELLKDVFD  299 (322)
T ss_pred             ---------hhhcc--ccccCCChHHHHHHHHHhhccCCcCCCCHHHHHHHHHHHHH
Confidence                     00000  00111122344455555555799999999999999876655

>cd07308 lectin_leg-like legume-like lectins: ERGIC-53, ERGL, VIP36, VIPL, EMP46, and EMP47

Probab=99.87  E-value=3.2e-21  Score=194.31  Aligned_cols=195  Identities=19%  Similarity=0.276  Sum_probs=136.7

Q ss_pred             CCeEEEcceEeecCcEEecCCCCCeEEEEEcCCCccccCCCCCcccceEEEEEEEEecCCCCCCCCceEEEEeeCCCCCC
Q 005257           36 SNLSLYGTATVESRILTLTNSTTFTIGRALYPSKIPTKRPNSSYVYPFSTSFIFAMAPYKGVLAGHGLVFLFVPFHGIKG  115 (705)
Q Consensus        36 ~~~~~~g~a~~~~~~l~lt~~~~~~~Gr~~y~~pv~l~~~~~~~~~sF~t~F~f~i~~~~~~~~g~G~aF~~~~~~~~~~  115 (705)
                      .+|.+.|+|.+.++.|+||++..++.|+++|+.|+++        ++|+|+|+|+|.+.. ..+||||||+++|...   
T Consensus        20 ~~w~~~G~a~~~~~~i~LT~~~~~~~G~~~~~~pi~~--------~~F~~~f~F~i~~~~-~~~gdG~af~~~~~~~---   87 (218)
T cd07308          20 GNWTVGGSTVITKNYIRLTPDVPSQSGSLWSRVPIPA--------KDFEIEVEFSIHGGS-GLGGDGFAFWYTEEPG---   87 (218)
T ss_pred             CCeEEcCCeEEeCCEEEeCCCCCCCEeEEEeCCCccC--------CCEEEEEEEEEeCCC-CCCCCEEEEEEECCCC---
Confidence            6899999999999999999999999999999999998        479999999998763 4589999999999643   


Q ss_pred             CCCCCcccccccCCCCCCCCcEEEEEeecccCCCCCCCCCCeeEEecCCCc-ccccccccccCCCCCCCCCCCCCCCCCC
Q 005257          116 ATEAQHLGLFNRTNDGNSSNHVFGVEFDVFKNQEFNDIDENHVGIDVNSLT-SVSAHAAGYWPDNQTDSSGSNSNSGTGD  194 (705)
Q Consensus       116 ~~~g~~lGl~~~~~~~~~~~~~vaVEFDt~~n~~~~d~~~~Hvgidvns~~-S~~~~~~~~~~~~~~~~~~~~~~~~~~~  194 (705)
                       ..|+.+|-       ....+.+||||||+.|.   +-...+|.+-+|.-+ +.....       +.+.....+|     
T Consensus        88 -~~g~~~G~-------~~~~~Glai~fdt~~n~---~~~~p~i~~~~Ndg~~~~~~~~-------d~~~~~~~~c-----  144 (218)
T cd07308          88 -SDGPLFGG-------PDKFKGLAIFFDTYDND---GKGFPSISVFLNDGTKSYDYET-------DGEKLELASC-----  144 (218)
T ss_pred             -CCCccccc-------CCCCCEEEEEEEcCCCC---CCCCCeEEEEEeCCCceecccC-------CCccccccce-----
Confidence             24555555       23467899999999985   223344544333221 110000       0000011122     


Q ss_pred             CccccceeecCC-CcceEEEEEecCceEEEEEEEccCCCCCCCceeeeecCccccccceecccccccccccccceeeeee
Q 005257          195 DEKSFKELKLNN-GKNYQVWIDYADSFINITMVEAGMKRPKRPLLSVPLNLSGVLEDEMYVGFTAATGQLVESHKILAWS  273 (705)
Q Consensus       195 ~~~~~~~~~l~~-g~~~~~~I~Y~~~~~~v~~~~~~~~~~~~~~ls~~vdl~~~l~~~~~vGfsastg~~~~~h~i~~ws  273 (705)
                            .+...+ +.+++++|.|....+.|.+....   +.....-..++.. .+|+..|+||||+||...+.|.|++|.
T Consensus       145 ------~~~~~~~~~~~~~~I~y~~~~l~v~i~~~~---~~~~~~c~~~~~~-~l~~~~y~G~sA~tg~~~d~~dIls~~  214 (218)
T cd07308         145 ------SLKFRNSNAPTTLRISYLNNTLKVDITYSE---GNNWKECFTVEDV-ILPSQGYFGFSAQTGDLSDNHDILSVH  214 (218)
T ss_pred             ------eEecccCCCCeEEEEEEECCEEEEEEeCCC---CCCccEEEEcCCc-ccCCCCEEEEEeccCCCcCcEEEEEEE
Confidence                  222222 67899999999888888887432   2222233333322 467899999999999999999999997


Q ss_pred             ec
Q 005257          274 FS  275 (705)
Q Consensus       274 f~  275 (705)
                      +.
T Consensus       215 ~~  216 (218)
T cd07308         215 TY  216 (218)
T ss_pred             ee
Confidence            64

The legume-like (leg-like) lectins are eukaryotic intracellular sugar transport proteins with a carbohydrate recognition domain similar to that of the legume lectins. This domain binds high-mannose-type oligosaccharides for transport from the endoplasmic reticulum to the Golgi complex. These leg-like lectins include ERGIC-53, ERGL, VIP36, VIPL, EMP46, EMP47, and the UIP5 (ULP1-interacting protein 5) precursor protein. Leg-like lectins have different intracellular distributions and dynamics in the endoplasmic reticulum-Golgi system of the secretory pathway and interact with N-glycans of glycoproteins in a calcium-dependent manner, suggesting a role in glycoprotein sorting and trafficking. L-type lectins have a dome-shaped beta-barrel carbohydrate recognition domain with a curved seven-stranded beta-sheet referred to as the "front face" and a flat six-stranded beta-sheet referred to as the "ba

>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=99.87  E-value=1.1e-21  Score=189.67  Aligned_cols=263  Identities=20%  Similarity=0.270  Sum_probs=201.3

Q ss_pred             hCCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCCchhHHHHHHHHHHhccCCCC-CcceeeeeeeeccCceEEEE
Q 005257          363 TKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHK-SLVGLRGWCKREKGSLMLVY  441 (705)
Q Consensus       363 t~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~~~~~~~~~Ei~~l~~l~Hp-niv~l~g~~~~~~~~~~lV~  441 (705)
                      ...|...++||.|+||.+|.|....+|+.||||.-+..  ....++.-|.++...|++- .|..+..+ ..++..-.+||
T Consensus        14 ~gky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~--a~hpqL~yEskvY~iL~~g~GiP~i~~y-~~e~~ynvlVM   90 (341)
T KOG1163|consen   14 GGKYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESSK--AKHPQLLYESKVYRILQGGVGIPHIRHY-GTEKDYNVLVM   90 (341)
T ss_pred             ccceEEEEeecCCchhheeeeeeccCCceEEEEeeccc--CCCcchhHHHHHHHHhccCCCCchhhhh-ccccccceeee
Confidence            45788999999999999999999999999999976433  2335677899999999764 44444444 44477778999


Q ss_pred             eeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccC---CCeeeeeeccceec
Q 005257          442 DYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKE---MNGRLGDFGLARMH  518 (705)
Q Consensus       442 E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~---~~~kL~DFGla~~~  518 (705)
                      |.+ |.||.++..-+..  .++...++-++-|++.-++|+|.   +++|||||||+|+|..-+   ..+.++|||||+.+
T Consensus        91 dLL-GPsLEdLfnfC~R--~ftmkTvLMLaDQml~RiEyvH~---r~fiHRDIKPdNFLMGlgrh~~kl~LIDFGLaKky  164 (341)
T KOG1163|consen   91 DLL-GPSLEDLFNFCSR--RFTMKTVLMLADQMLSRIEYVHL---RNFIHRDIKPDNFLMGLGRHCNKLYLIDFGLAKKY  164 (341)
T ss_pred             ecc-CccHHHHHHHHhh--hhhHHhHHHHHHHHHHHHHHHHh---hccccccCCccceeeccccccceEEEEeccchhhh
Confidence            999 7799998877665  59999999999999999999998   999999999999999643   45889999999876


Q ss_pred             CCCCc------ceeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhHH
Q 005257          519 GHGQV------ASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDA  592 (705)
Q Consensus       519 ~~~~~------~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~~  592 (705)
                      .....      .......||.+|.+--...+.+.+.+.|+-|+|.+|..+-.|..||++-....-..-.+.+.+.++...
T Consensus       165 ~d~~t~~HIpyre~r~ltGTaRYASinAh~g~eqSRRDDmeSvgYvLmYfnrG~LPWQglka~tk~QKyEkI~EkK~s~~  244 (341)
T KOG1163|consen  165 RDIRTRQHIPYREDRNLTGTARYASINAHLGIEQSRRDDMESVGYVLMYFNRGSLPWQGLKAATKKQKYEKISEKKMSTP  244 (341)
T ss_pred             ccccccccCccccCCccceeeeehhhhhhhhhhhhhhhhhhhhcceeeeeecCCCcccccchhhHHHHHHHHHHhhcCCC
Confidence            54322      223457899999998888888889999999999999999999999998665443333444444332221


Q ss_pred             HHHhhhcCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHhccc
Q 005257          593 LDARLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLEGKIE  641 (705)
Q Consensus       593 id~~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~  641 (705)
                      +..-.   ..+    +.++.-.+..|-..--++.|...-+.+.+.-+..
T Consensus       245 ie~LC---~G~----P~EF~myl~Y~R~L~F~E~Pdy~ylrqlFriLfr  286 (341)
T KOG1163|consen  245 IEVLC---KGF----PAEFAMYLNYCRGLGFEEKPDYMYLRQLFRILFR  286 (341)
T ss_pred             HHHHh---CCC----cHHHHHHHHHHhhcCCCCCCcHHHHHHHHHHHHh
Confidence            11111   122    2345666777888889999999888887776655

>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=99.87  E-value=7.4e-22  Score=198.75  Aligned_cols=263  Identities=19%  Similarity=0.255  Sum_probs=202.0

Q ss_pred             CCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCCchhHHHHHHHHHHhccC-CCCCcceeeeeeeeccCceEEEEee
Q 005257          365 GFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRL-KHKSLVGLRGWCKREKGSLMLVYDY  443 (705)
Q Consensus       365 ~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~~~~~~~~~Ei~~l~~l-~Hpniv~l~g~~~~~~~~~~lV~E~  443 (705)
                      .|...++||+|.||..+.|+.--++++||||.-...  ....++..|.+..+.| ..++|...+-+-. ++.+-.||+|.
T Consensus        29 hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPrk--S~APQLrdEYr~YKlL~g~~GIP~vYYFGq-eG~~NiLVidL  105 (449)
T KOG1165|consen   29 HYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPRK--SEAPQLRDEYRTYKLLGGTEGIPQVYYFGQ-EGKYNILVIDL  105 (449)
T ss_pred             cceeccccccCcceeeecccccccCceEEEEecccc--CCcchHHHHHHHHHHHcCCCCCCceeeecc-ccchhhhhhhh
Confidence            588899999999999999999889999999975543  3345677788777777 4677777765443 35566899999


Q ss_pred             CCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccC-----CCeeeeeeccceec
Q 005257          444 MENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKE-----MNGRLGDFGLARMH  518 (705)
Q Consensus       444 ~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~-----~~~kL~DFGla~~~  518 (705)
                      + |-||+++..-++.  .++.+.+..+++|++.-++|+|+   +.+|.|||||+|+||..-     ..+.|+|||+|+.+
T Consensus       106 L-GPSLEDLFD~CgR--~FSvKTV~miA~Qmi~rie~vH~---k~LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGmAK~Y  179 (449)
T KOG1165|consen  106 L-GPSLEDLFDLCGR--RFSVKTVAMIAKQMITRIEYVHE---KDLIYRDIKPDNFLIGRPGTKDANVIHIIDFGMAKEY  179 (449)
T ss_pred             h-CcCHHHHHHHhcC--cccHHhHHHHHHHHHHHHHHHHh---cceeecccCccceeecCCCCCCCceEEEEeccchhhh
Confidence            9 7799998877765  69999999999999999999998   999999999999999643     34789999999988


Q ss_pred             CCCCcce------eeeeeccccCCCccccccCCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhHH
Q 005257          519 GHGQVAS------TTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDA  592 (705)
Q Consensus       519 ~~~~~~~------~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~~  592 (705)
                      .......      .....||.+||+-....+.+.+.+.|+-|+|-++...+.|..||++-...-...-.+.+.+.+-...
T Consensus       180 rDp~TkqHIPYrE~KSLsGTARYMSINTHlGrEQSRRDDLEaLGHvFmYFLRGsLPWQGLKA~tnK~kYeKIGe~Kr~T~  259 (449)
T KOG1165|consen  180 RDPKTKQHIPYREHKSLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKADTNKEKYEKIGETKRSTP  259 (449)
T ss_pred             cCccccccCccccccccccceeeeEeeccccchhhhhhhHHHhhhhhhhhccCCCccccccCcchHHHHHHhccccccCC
Confidence            6554322      3446899999999999999999999999999999999999999998665444444455544333222


Q ss_pred             HHHhhhcCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHhccccC
Q 005257          593 LDARLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLEGKIEAG  643 (705)
Q Consensus       593 id~~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~~~  643 (705)
                      ++.-.   ..+ ++++...+..++   ..+-.+-|...-+...+.+.++..
T Consensus       260 i~~Lc---~g~-P~efa~Yl~yvR---~L~F~E~PDYdylr~Lf~dvldr~  303 (449)
T KOG1165|consen  260 IEVLC---EGF-PEEFATYLRYVR---RLDFFETPDYDYLRKLFDDVLDRL  303 (449)
T ss_pred             HHHHH---hcC-HHHHHHHHHHHH---hcCcccCCCHHHHHHHHHHHHHhc
Confidence            22211   112 234444555544   457888899998888887766533

>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

Probab=99.85  E-value=1.2e-20  Score=198.18  Aligned_cols=260  Identities=29%  Similarity=0.427  Sum_probs=196.4

Q ss_pred             CCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCCch---hHHHHHHHHHHhccCCCC-CcceeeeeeeeccCceEEEE
Q 005257          366 FSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDG---GTRAFLAEISSLGRLKHK-SLVGLRGWCKREKGSLMLVY  441 (705)
Q Consensus       366 f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~~---~~~~~~~Ei~~l~~l~Hp-niv~l~g~~~~~~~~~~lV~  441 (705)
                      |...+.||.|+||.||++...   ..+++|.+......   ....+.+|+.++..+.|+ +++++...+.. ....++++
T Consensus         2 ~~~~~~l~~g~~~~v~~~~~~---~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~-~~~~~~~~   77 (384)
T COG0515           2 YRILRKLGEGSFGEVYLARDR---KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQD-EGSLYLVM   77 (384)
T ss_pred             ceeEEeecCCCCeEEEEEEec---cEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEEec-CCEEEEEE
Confidence            566788999999999999997   67999998765332   467899999999999988 79999998844 55579999


Q ss_pred             eeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCC-CeeeeeeccceecCC
Q 005257          442 DYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEM-NGRLGDFGLARMHGH  520 (705)
Q Consensus       442 E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~-~~kL~DFGla~~~~~  520 (705)
                      +++.++++.+++........+.......++.|++.++.|+|+   .+++|||+||+||+++..+ .++++|||+++....
T Consensus        78 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~H~---~~~~hrd~kp~nil~~~~~~~~~l~dfg~~~~~~~  154 (384)
T COG0515          78 EYVDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLHS---KGIIHRDIKPENILLDRDGRVVKLIDFGLAKLLPD  154 (384)
T ss_pred             ecCCCCcHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHh---CCeeccCCCHHHeeecCCCCeEEEeccCcceecCC
Confidence            999999999776543211258899999999999999999998   8899999999999999988 699999999986554


Q ss_pred             CCcc-----eeeeeeccccCCCcccccc---CCCCccccEEEEehhHHHHhhCCCCCCCCCcc-HHHHHHHHHHhCchhH
Q 005257          521 GQVA-----STTRVVGTVGYLAPEVFSS---GRASTQTDVFGFGILILEVLSGRRPIEEGKPN-LVEMVWELMVQGKLLD  591 (705)
Q Consensus       521 ~~~~-----~~~~~~gt~~y~APE~~~~---~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~-~~~~v~~~~~~~~~~~  591 (705)
                      ....     ......|+..|+|||.+..   .......|+||+|++++++++|..|+...... ........+...... 
T Consensus       155 ~~~~~~~~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~-  233 (384)
T COG0515         155 PGSTSSIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQTLKIILELPTP-  233 (384)
T ss_pred             CCccccccccccccccccccCCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccccHHHHHHHHHhcCCc-
Confidence            4322     2345689999999999987   57899999999999999999999997654421 111222222111110 


Q ss_pred             HHHHhhhcCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 005257          592 ALDARLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKV  635 (705)
Q Consensus       592 ~id~~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  635 (705)
                      .......  ..........+.+++..|+..+|..|.++.+....
T Consensus       234 ~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~  275 (384)
T COG0515         234 SLASPLS--PSNPELISKAASDLLKKLLAKDPKNRLSSSSDLSH  275 (384)
T ss_pred             ccccccC--ccccchhhHHHHHHHHHHHhcCchhcCCHHHHhhc
Confidence            0000000  00001122567888888999999999999887764

>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=99.83  E-value=7e-21  Score=217.09  Aligned_cols=254  Identities=20%  Similarity=0.233  Sum_probs=185.2

Q ss_pred             CcceEEeecCceEEEEEEEcCCCeEEEEEEecc-----CCchh-HHHHHHHHHHhccCCCCCcceeeeeeeeccCceEEE
Q 005257          367 SEENVIGVGGNGKVYKGVLEGGGAEIAVKRISH-----ENDGG-TRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLV  440 (705)
Q Consensus       367 ~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~-----~~~~~-~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~lV  440 (705)
                      ...+++|.|.+|.|+........+..+.|....     ..... ...+..|+.+-..++|||++..+..+.+.. ...-.
T Consensus       321 ~~~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~~~~~~s~~~~~~~i~sE~~i~~~l~h~~~~e~l~~~~~~~-~~~~~  399 (601)
T KOG0590|consen  321 KPGRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVRVKPTESERKYNYNITSEFCIGSSLSHPNIIETLDIVQEID-GILQS  399 (601)
T ss_pred             CccceeeecccCceEEEEecCCCccchhhhhhcccCCcccHHHHhhhhhhheeecccccCCchhhhHHHHhhcc-cchhh
Confidence            456789999999888887765555555554431     11111 122667888888999999988877766533 33444


Q ss_pred             EeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecCC
Q 005257          441 YDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGH  520 (705)
Q Consensus       441 ~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~~  520 (705)
                      |||+++ +|..++...   ..++..++..+++|+..|+.|||+   .+|.|||||++|++++.++.+||+|||.+..+..
T Consensus       400 mE~~~~-Dlf~~~~~~---~~~~~~e~~c~fKqL~~Gv~y~h~---~GiahrdlK~enll~~~~g~lki~Dfg~~~vf~~  472 (601)
T KOG0590|consen  400 MEYCPY-DLFSLVMSN---GKLTPLEADCFFKQLLRGVKYLHS---MGLAHRDLKLENLLVTENGILKIIDFGAASVFRY  472 (601)
T ss_pred             hhcccH-HHHHHHhcc---cccchhhhhHHHHHHHHHHHHHHh---cCceeccCccccEEEecCCceEEeecCcceeecc
Confidence            999999 999988654   268899999999999999999999   9999999999999999999999999999987654


Q ss_pred             CCc---ceeeeeeccccCCCccccccCCCCc-cccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhHHHHHh
Q 005257          521 GQV---ASTTRVVGTVGYLAPEVFSSGRAST-QTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDAR  596 (705)
Q Consensus       521 ~~~---~~~~~~~gt~~y~APE~~~~~~~s~-ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~  596 (705)
                      +..   ......+|+..|+|||.+.+.+|.+ ..||||.|+++..|++|+.||.......... .+....+.. .... .
T Consensus       473 ~~e~~~~~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~~~~~~-~~~~~~~~~-~~~~-~  549 (601)
T KOG0590|consen  473 PWEKNIHESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYICMILGRFPWKVAKKSDNSF-KTNNYSDQR-NIFE-G  549 (601)
T ss_pred             CcchhhhhhcCcccCCcCcCcccccccccCcchhhhhhccceEEEEecCCCccccccccccch-hhhcccccc-cccc-C
Confidence            433   3345578999999999999988865 5899999999999999999996533211000 000000000 0000 0


Q ss_pred             hhcCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHH
Q 005257          597 LRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVK  634 (705)
Q Consensus       597 l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~  634 (705)
                      .   .......+..-..++..++++||.+|-++.+|++
T Consensus       550 ~---~~~~~~lp~~~~~~~~~~l~~~P~~R~ti~~i~~  584 (601)
T KOG0590|consen  550 P---NRLLSLLPRETRIIIYRMLQLDPTKRITIEQILN  584 (601)
T ss_pred             h---HHHHHhchhhHHHHHHHHccCChhheecHHHHhh
Confidence            0   0111233456677888899999999999999987

>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain

Probab=99.81  E-value=7.8e-20  Score=180.21  Aligned_cols=141  Identities=19%  Similarity=0.179  Sum_probs=108.7

Q ss_pred             ceEEeecCceEEEEEEEcCCCeEEEEEEeccCCch--h-------HHH-----------------HHHHHHHhccCCCCC
Q 005257          369 ENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDG--G-------TRA-----------------FLAEISSLGRLKHKS  422 (705)
Q Consensus       369 ~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~~--~-------~~~-----------------~~~Ei~~l~~l~Hpn  422 (705)
                      .+.||+|+||.||+|.+. +|+.||||+++.....  .       ...                 ...|++.+.++.+++
T Consensus         2 ~~~ig~G~~~~Vy~a~~~-~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~   80 (190)
T cd05147           2 NGCISTGKEANVYHATTA-NGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAG   80 (190)
T ss_pred             CCccccccceEEEEEECC-CCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCC
Confidence            467999999999999997 7899999998654211  1       111                 234999999998887


Q ss_pred             cceeeeeeeeccCceEEEEeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHH-hcCCCCCeeecCCCCCCeEE
Q 005257          423 LVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYL-HEGWEKKVLHRDIKSSNVLL  501 (705)
Q Consensus       423 iv~l~g~~~~~~~~~~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yL-H~~~~~~iiHrDLkp~NILl  501 (705)
                      +.....+..  . ..+|||||++++++...+...   ..++..+..+++.|++.+|.+| |+   .+|+||||||+|||+
T Consensus        81 v~~p~~~~~--~-~~~iVmE~i~g~~l~~~~~~~---~~~~~~~~~~i~~qi~~~L~~l~H~---~giiHrDlkP~NIli  151 (190)
T cd05147          81 IPCPEPILL--K-SHVLVMEFIGDDGWAAPRLKD---APLSESKARELYLQVIQIMRILYQD---CRLVHADLSEYNLLY  151 (190)
T ss_pred             CCCCcEEEe--c-CCEEEEEEeCCCCCcchhhhc---CCCCHHHHHHHHHHHHHHHHHHHHh---CCcccCCCCHHHEEE
Confidence            643332211  2 238999999988776543222   2688999999999999999999 66   899999999999999


Q ss_pred             ccCCCeeeeeeccceecCC
Q 005257          502 DKEMNGRLGDFGLARMHGH  520 (705)
Q Consensus       502 d~~~~~kL~DFGla~~~~~  520 (705)
                      + ++.++|+|||+|....+
T Consensus       152 ~-~~~v~LiDFG~a~~~~~  169 (190)
T cd05147         152 H-DGKLYIIDVSQSVEHDH  169 (190)
T ss_pred             E-CCcEEEEEccccccCCC
Confidence            8 47899999999975443

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c

>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional

Probab=99.81  E-value=1e-19  Score=181.98  Aligned_cols=180  Identities=16%  Similarity=0.167  Sum_probs=136.1

Q ss_pred             cCHHHHH--HHhCCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCCchhHH---H------HHHHHHHhccCCCCC
Q 005257          354 ITYQEIE--AATKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTR---A------FLAEISSLGRLKHKS  422 (705)
Q Consensus       354 ~~~~el~--~at~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~~~~~---~------~~~Ei~~l~~l~Hpn  422 (705)
                      ..|.++.  ...++|...++||.|+||.||....  ++..+|||.+........+   .      +.+|++.+.+++||+
T Consensus        19 ~~~~~~~~~~l~~~y~~~~~l~~~~f~~v~l~~~--~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~G   96 (232)
T PRK10359         19 NKYKEIFDDFLSYNIKTIKVFRNIDDTKVSLIDT--DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEG   96 (232)
T ss_pred             ccHHHHHHHHhhCceEEEEEecCCCceEEEEEec--CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCC
Confidence            3455543  3678999999999999999999655  3567999999755322222   2      679999999999999


Q ss_pred             cceeeeeeeec-------cCceEEEEeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCC
Q 005257          423 LVGLRGWCKRE-------KGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIK  495 (705)
Q Consensus       423 iv~l~g~~~~~-------~~~~~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLk  495 (705)
                      |..+..+....       .+..+|||||++|.+|.++.       .++.    ....+++.+|..||+   .+++|||+|
T Consensus        97 I~~~~d~~~~~~~~~~~~~~~~~lvmEyi~G~tL~~~~-------~~~~----~~~~~i~~~l~~lH~---~gi~H~Dik  162 (232)
T PRK10359         97 LASLNDFYLLAERKTLRYAHTYIMLIEYIEGVELNDMP-------EISE----DVKAKIKASIESLHQ---HGMVSGDPH  162 (232)
T ss_pred             CCcceEeeeecccccccccCCeEEEEEEECCccHHHhh-------hccH----HHHHHHHHHHHHHHH---cCCccCCCC
Confidence            99988875432       23578999999999998874       2332    245699999999998   999999999


Q ss_pred             CCCeEEccCCCeeeeeeccceecCCCCcceeeeeeccccCCCccccccCCCCccccEEEEehhHHHHh
Q 005257          496 SSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVL  563 (705)
Q Consensus       496 p~NILld~~~~~kL~DFGla~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~Ell  563 (705)
                      |+||+++.++ ++|+|||............             .+.....+..++|+||||+.+.-+.
T Consensus       163 p~Nili~~~g-i~liDfg~~~~~~e~~a~d-------------~~vler~y~~~~di~~lg~~~~~~~  216 (232)
T PRK10359        163 KGNFIVSKNG-LRIIDLSGKRCTAQRKAKD-------------RIDLERHYGIKNEIKDLGYYLLIYK  216 (232)
T ss_pred             hHHEEEeCCC-EEEEECCCcccccchhhHH-------------HHHHHhHhcccccccceeEeehHHH
Confidence            9999999888 9999999887553221111             1233445667999999999986543

>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain

Probab=99.79  E-value=1.3e-18  Score=171.71  Aligned_cols=141  Identities=20%  Similarity=0.185  Sum_probs=111.0

Q ss_pred             ceEEeecCceEEEEEEEcCCCeEEEEEEeccCCchh--------------------------HHHHHHHHHHhccCCCCC
Q 005257          369 ENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGG--------------------------TRAFLAEISSLGRLKHKS  422 (705)
Q Consensus       369 ~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~~~--------------------------~~~~~~Ei~~l~~l~Hpn  422 (705)
                      .+.||+|++|.||+|.+. +|+.||||+++......                          ...+..|.+.+.+++|++
T Consensus         2 ~~~ig~G~~~~Vy~a~~~-~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~   80 (190)
T cd05145           2 NGCISTGKEANVYHARTG-DGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEAG   80 (190)
T ss_pred             CceeecCCCcEEEEEEcC-CCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhCC
Confidence            468999999999999987 78999999987542110                          112357899999999998


Q ss_pred             cceeeeeeeeccCceEEEEeeCCCCChhHH-HHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEE
Q 005257          423 LVGLRGWCKREKGSLMLVYDYMENGSLDKW-IFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLL  501 (705)
Q Consensus       423 iv~l~g~~~~~~~~~~lV~E~~~~gsL~~~-L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILl  501 (705)
                      +.....+...   ..+|||||++++++... +..    ..++..+..+++.|++.+|.+||+  ..+|+||||||+|||+
T Consensus        81 i~~p~~~~~~---~~~lVmE~~~g~~~~~~~l~~----~~~~~~~~~~i~~~l~~~l~~lH~--~~givHrDlkP~NIll  151 (190)
T cd05145          81 VPVPEPILLK---KNVLVMEFIGDDGSPAPRLKD----VPLEEEEAEELYEQVVEQMRRLYQ--EAGLVHGDLSEYNILY  151 (190)
T ss_pred             CCCceEEEec---CCEEEEEEecCCCchhhhhhh----ccCCHHHHHHHHHHHHHHHHHHHH--hCCEecCCCChhhEEE
Confidence            7544433322   23899999998865443 322    257888999999999999999996  4799999999999999


Q ss_pred             ccCCCeeeeeeccceecCC
Q 005257          502 DKEMNGRLGDFGLARMHGH  520 (705)
Q Consensus       502 d~~~~~kL~DFGla~~~~~  520 (705)
                      + ++.++|+|||++....+
T Consensus       152 ~-~~~~~liDFG~a~~~~~  169 (190)
T cd05145         152 H-DGKPYIIDVSQAVELDH  169 (190)
T ss_pred             E-CCCEEEEEcccceecCC
Confidence            9 78999999999987654

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro

>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]

Probab=99.78  E-value=3.3e-19  Score=194.68  Aligned_cols=217  Identities=22%  Similarity=0.335  Sum_probs=160.8

Q ss_pred             hccCCCCCcceeeeeeeeccCceEEEEeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCC
Q 005257          415 LGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDI  494 (705)
Q Consensus       415 l~~l~Hpniv~l~g~~~~~~~~~~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDL  494 (705)
                      |+.+.|.|+.+++|.|.. +...++|.+|++.|+|.+.+....  ..+++.....++++++.||.|||+.  .--.|+.+
T Consensus         1 l~~l~h~n~~~f~g~~~~-~~~~~~i~~~c~rGsl~D~i~~~~--~~~d~~F~~s~~rdi~~Gl~ylh~s--~i~~hg~l   75 (484)
T KOG1023|consen    1 LRQLDHDNLNKFIGASVD-GPEMIVIWEYCSRGSLLDILSNED--IKLDYFFILSFIRDISKGLAYLHNS--PIGYHGAL   75 (484)
T ss_pred             CcccchhhhhhheeeEec-CCceEEEEeeecCccHHhHHhccc--cCccHHHHHHHHHHHHHHHHHHhcC--cceeeeee
Confidence            467899999999999998 578899999999999999997633  3689999999999999999999982  33399999


Q ss_pred             CCCCeEEccCCCeeeeeeccceecCCC-CcceeeeeeccccCCCccccccC-------CCCccccEEEEehhHHHHhhCC
Q 005257          495 KSSNVLLDKEMNGRLGDFGLARMHGHG-QVASTTRVVGTVGYLAPEVFSSG-------RASTQTDVFGFGILILEVLSGR  566 (705)
Q Consensus       495 kp~NILld~~~~~kL~DFGla~~~~~~-~~~~~~~~~gt~~y~APE~~~~~-------~~s~ksDVwS~Gvvl~ElltG~  566 (705)
                      +++|+++|..+.+||+|||+....... .........-...|.|||.+...       ..+.+.||||||++++|+++.+
T Consensus        76 ~s~nClvd~~w~lklt~~Gl~~~~~~~~~~~~~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiYs~~ii~~ei~~r~  155 (484)
T KOG1023|consen   76 KSSNCLVDSRWVLKLTDFGLNSLLEETAEPEAHHPIRKALLWTAPELLRGALSQSLESALTQKGDIYSFGIIMYEILFRS  155 (484)
T ss_pred             ccccceeeeeEEEEechhhhcccccccccccccchhHHHHhccCHHHhcccccccccccccccCCeehHHHHHHHHHhcc
Confidence            999999999999999999998766421 11111111234579999999763       1467899999999999999999


Q ss_pred             CCCCCCCccHH-HHHHHHHHhCchhHHHHHhhhcCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHhccc
Q 005257          567 RPIEEGKPNLV-EMVWELMVQGKLLDALDARLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLEGKIE  641 (705)
Q Consensus       567 ~Pf~~~~~~~~-~~v~~~~~~~~~~~~id~~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~  641 (705)
                      .||........ +.+...+..+. ...+.+.+..    ..+..+.+..++..||..+|.+||+++++...++....
T Consensus       156 ~~~~~~~~~~~~~eii~~~~~~~-~~~~rP~i~~----~~e~~~~l~~l~~~cw~e~P~~rPs~~~i~~~~~~~~~  226 (484)
T KOG1023|consen  156 GPFDLRNLVEDPDEIILRVKKGG-SNPFRPSIEL----LNELPPELLLLVARCWEEIPEKRPSIEQIRSKLLTINK  226 (484)
T ss_pred             CccccccccCChHHHHHHHHhcC-CCCcCcchhh----hhhcchHHHHHHHHhcccChhhCccHHHHHhhhhhhcc
Confidence            99986432211 11111122200 0111111110    11333468999999999999999999999998886655

>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]

Probab=99.78  E-value=6.6e-20  Score=199.84  Aligned_cols=233  Identities=25%  Similarity=0.296  Sum_probs=179.9

Q ss_pred             EeecCceEEEEEEE---cCCCeEEEEEEeccCCch--hHHHHHHHHHHhccCC-CCCcceeeeeeeeccCceEEEEeeCC
Q 005257          372 IGVGGNGKVYKGVL---EGGGAEIAVKRISHENDG--GTRAFLAEISSLGRLK-HKSLVGLRGWCKREKGSLMLVYDYME  445 (705)
Q Consensus       372 LG~G~fg~Vy~~~~---~~~~~~vavK~i~~~~~~--~~~~~~~Ei~~l~~l~-Hpniv~l~g~~~~~~~~~~lV~E~~~  445 (705)
                      +|+|.||.|+++.-   .+.+.-+|+|.+++....  .......|..++...+ ||.++++...+.. +..++++.++..
T Consensus         2 lg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~~t~~er~il~~~~~~~f~v~lhyafqt-~~kl~l~ld~~r   80 (612)
T KOG0603|consen    2 LGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRTHTKQERIILAFVHNTPFLVKLHYAFQT-DGKLYLILDFLR   80 (612)
T ss_pred             CCcCCCcchHHHHHhccccccchhhhhcccccccccccccccccHHHHHhhccCCCceeeeeeeecc-ccchhHhhhhcc
Confidence            78999999987543   345677899887665321  1124566888888887 9999998876654 788999999999


Q ss_pred             CCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecCCCCcce
Q 005257          446 NGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVAS  525 (705)
Q Consensus       446 ~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~~~~~~~  525 (705)
                      +|.|...+.+..   .+...........++-+++++|+   .+++|||+|++||+++.+|.+++.|||+++..-..... 
T Consensus        81 gg~lft~l~~~~---~f~~~~~~~~~aelaLald~lh~---l~iiyrd~k~enilld~~Ghi~~tdfglske~v~~~~~-  153 (612)
T KOG0603|consen   81 GGDLFTRLSKEV---MFDELDVAFYLAELALALDHLHK---LGIAYRDYKLENVLLLLEGHIKLTDFGLSKEAVKEKIA-  153 (612)
T ss_pred             cchhhhccccCC---chHHHHHHHHHHHHHHHHhhcch---hHHHHhcccccceeecccCccccCCchhhhHhHhhhhc-
Confidence            999988886533   57777888888999999999998   99999999999999999999999999999865443322 


Q ss_pred             eeeeeccccCCCccccccCCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhHHHHHhhhcCCCCCH
Q 005257          526 TTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRAKGGFDE  605 (705)
Q Consensus       526 ~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~l~~~~~~~~  605 (705)
                          +||..|||||++.  .....+|.||||++.+||+||..||..                   +.+...++.+...+.
T Consensus       154 ----cgt~eymApEI~~--gh~~a~D~ws~gvl~felltg~~pf~~-------------------~~~~~Il~~~~~~p~  208 (612)
T KOG0603|consen  154 ----CGTYEYRAPEIIN--GHLSAADWWSFGVLAFELLTGTLPFGG-------------------DTMKRILKAELEMPR  208 (612)
T ss_pred             ----ccchhhhhhHhhh--ccCCcccchhhhhhHHHHhhCCCCCch-------------------HHHHHHhhhccCCch
Confidence                8999999999997  578899999999999999999999975                   111112222244555


Q ss_pred             HHHHHHHHHHHHcCCCCCCCCCCH--HHHHHHHH
Q 005257          606 DEVERVLHLGLLCAYPDPRARPTM--RQVVKVLE  637 (705)
Q Consensus       606 ~~~~~l~~l~~~Cl~~dP~~RPs~--~evl~~L~  637 (705)
                      +.......+.......+|..|--.  ..+.++++
T Consensus       209 ~l~~~a~~~~~~l~~r~p~nrLg~~~~~~~eik~  242 (612)
T KOG0603|consen  209 ELSAEARSLFRQLFKRNPENRLGAGPDGVDEIKQ  242 (612)
T ss_pred             hhhHHHHHHHHHHHhhCHHHHhccCcchhHHHhc
Confidence            666666777777777788888544  44445444

>cd06901 lectin_VIP36_VIPL VIP36 and VIPL type 1 transmembrane proteins, lectin domain

Probab=99.77  E-value=3.7e-17  Score=165.94  Aligned_cols=201  Identities=19%  Similarity=0.232  Sum_probs=133.8

Q ss_pred             CCCeEEEcceEeecCcEEecCCCCCeEEEEEcCCCccccCCCCCcccceEEEEEEEEecCCCCCCCCceEEEEeeCCCCC
Q 005257           35 SSNLSLYGTATVESRILTLTNSTTFTIGRALYPSKIPTKRPNSSYVYPFSTSFIFAMAPYKGVLAGHGLVFLFVPFHGIK  114 (705)
Q Consensus        35 ~~~~~~~g~a~~~~~~l~lt~~~~~~~Gr~~y~~pv~l~~~~~~~~~sF~t~F~f~i~~~~~~~~g~G~aF~~~~~~~~~  114 (705)
                      ..+|.+.|+|.+.++.|+||++.+.+.|++||+.|+++        .+|+|+|+|+|.+.+...+||||||+++....  
T Consensus        19 i~~w~~~G~a~v~~~~IrLTp~~~~~~G~~w~~~p~~~--------~~F~~~f~F~I~~~~~~~~GdGlAfw~t~~~~--   88 (248)
T cd06901          19 MPLWDFLGSTMVTSQYIRLTPDHQSKQGSIWNRVPCYL--------RDWEMHVHFKVHGSGKNLFGDGFAIWYTKERM--   88 (248)
T ss_pred             CCCEEEcceEEEcCCeEEECCCCCCCEEEEeccCCccC--------CCEEEEEEEEEeCCCCCCCCCEEEEEEEcCCC--
Confidence            47899999999998899999999989999999999999        57999999999987666789999999998632  


Q ss_pred             CCCCCCcccccccCCCCCCCCcEEEEEeecccCCCCC-CCCCCeeEEecCCCcccccccccccC-CCCCCCCCCCCCCCC
Q 005257          115 GATEAQHLGLFNRTNDGNSSNHVFGVEFDVFKNQEFN-DIDENHVGIDVNSLTSVSAHAAGYWP-DNQTDSSGSNSNSGT  192 (705)
Q Consensus       115 ~~~~g~~lGl~~~~~~~~~~~~~vaVEFDt~~n~~~~-d~~~~Hvgidvns~~S~~~~~~~~~~-~~~~~~~~~~~~~~~  192 (705)
                        ..|..+|-       .....-+||-|||+.|..-. ....+=|.+=+|.= +..      |+ +.+.+.....+|...
T Consensus        89 --~~G~~fG~-------~~~f~Gl~I~~Dt~~n~~~~~~~~~P~i~~~~NDG-t~~------yd~~~Dg~~~~~~~C~~~  152 (248)
T cd06901          89 --QPGPVFGS-------KDNFHGLAIFFDTYSNQNGEHEHVHPYISAMVNNG-SLS------YDHDRDGTHTELAGCSAP  152 (248)
T ss_pred             --ccCccccc-------CCCCceEEEEEECCCCCCCcccCCCceEEEEEcCC-Cee------ecccCCCchhhcCceeee
Confidence              33444454       23446799999999986310 01111122222211 111      11 111112233444322


Q ss_pred             CCCccccceeecCCCcceEEEEEecCceEEEEEEEccCCCCCCCceeeeecCcc-ccccceecccccccccccccceeee
Q 005257          193 GDDEKSFKELKLNNGKNYQVWIDYADSFINITMVEAGMKRPKRPLLSVPLNLSG-VLEDEMYVGFTAATGQLVESHKILA  271 (705)
Q Consensus       193 ~~~~~~~~~~~l~~g~~~~~~I~Y~~~~~~v~~~~~~~~~~~~~~ls~~vdl~~-~l~~~~~vGfsastg~~~~~h~i~~  271 (705)
                      ++          ..+.+.+++|.|....+.|.+...+.  ..  .... .+... .||...|+||||+||...+.|.|++
T Consensus       153 ~r----------n~~~~t~~rI~Y~~~~l~v~vd~~~~--~~--w~~C-f~~~~v~LP~~~yfGiSA~Tg~~sd~hdIls  217 (248)
T cd06901         153 FR----------NKDHDTFVAIRYSKGRLTVMTDIDGK--NE--WKEC-FDVTGVRLPTGYYFGASAATGDLSDNHDIIS  217 (248)
T ss_pred             cc----------CCCCCeEEEEEEECCeEEEEEecCCC--Cc--eeee-EEeCCeecCCCCEEEEEecCCCCCCcEEEEE
Confidence            22          23456789999977778888865432  11  1111 22222 2677799999999999999999999


Q ss_pred             eeecc
Q 005257          272 WSFSN  276 (705)
Q Consensus       272 wsf~~  276 (705)
                      -.+..
T Consensus       218 v~~~~  222 (248)
T cd06901         218 MKLYE  222 (248)
T ss_pred             EEEec
Confidence            66544

The vesicular integral protein of 36 kDa (VIP36) is a type 1 transmembrane protein of the mammalian early secretory pathway that acts as a cargo receptor transporting high mannose type glycoproteins between the Golgi and the endoplasmic reticulum (ER). Lectins of the early secretory pathway are involved in the selective transport of newly synthesized glycoproteins from the ER to the ER-Golgi intermediate compartment (ERGIC). The most prominent cycling lectin is the mannose-binding type1 membrane protein ERGIC-53, which functions as a cargo receptor to facilitate export of glycoproteins from the ER. L-type lectins have a dome-shaped beta-barrel carbohydrate recognition domain with a curved seven-stranded beta-sheet referred to as the "front face" and a flat six-stranded beta-sheet referred to as the "back face". This domain homodimerizes so that adjacent back sheets form a contiguous 12-stranded she

>PRK10345 hypothetical protein; Provisional

Probab=99.76  E-value=4.9e-18  Score=169.25  Aligned_cols=138  Identities=20%  Similarity=0.344  Sum_probs=109.3

Q ss_pred             CCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCCchhHHHHHHHHHHhccC-----CCCCcceeeeeeeecc--Cc-e
Q 005257          366 FSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRL-----KHKSLVGLRGWCKREK--GS-L  437 (705)
Q Consensus       366 f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~~~~~~~~~Ei~~l~~l-----~Hpniv~l~g~~~~~~--~~-~  437 (705)
                      ....+.||+|+||.||.  ++.++.. +||++........+.+.+|++++..+     .||||++++|++..+.  +. .
T Consensus         4 L~~~~~LG~G~~~~Vy~--hp~~~~k-~IKv~~~~~~~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g~v~   80 (210)
T PRK10345          4 LSEQSPLGTGRHRKCYA--HPEDAQR-CIKIVYHRGDGGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTGYVY   80 (210)
T ss_pred             cCCcceecCCCceEEEE--CCCCcCe-EEEEEeccccchHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCeEEE
Confidence            34567899999999996  6666555 69988766555667899999999999     5799999999988753  23 3


Q ss_pred             EEEEee--CCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHH-HHHhcCCCCCeeecCCCCCCeEEcc----CCCeeee
Q 005257          438 MLVYDY--MENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGV-LYLHEGWEKKVLHRDIKSSNVLLDK----EMNGRLG  510 (705)
Q Consensus       438 ~lV~E~--~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL-~yLH~~~~~~iiHrDLkp~NILld~----~~~~kL~  510 (705)
                      .+|+||  +++|+|.+++.+.    .+++.  ..++.|++.++ +|||+   ++|+||||||+|||++.    +..++|+
T Consensus        81 ~~I~e~~G~~~~tL~~~l~~~----~~~e~--~~~~~~~L~~l~~yLh~---~~IvhrDlKp~NILl~~~~~~~~~~~Li  151 (210)
T PRK10345         81 DVIADFDGKPSITLTEFAEQC----RYEED--VAQLRQLLKKLKRYLLD---NRIVTMELKPQNILCQRISESEVIPVVC  151 (210)
T ss_pred             EEEecCCCCcchhHHHHHHcc----cccHh--HHHHHHHHHHHHHHHHH---CCEeecCCCHHHEEEeccCCCCCcEEEE
Confidence            378999  5589999999542    35544  35678888888 89998   99999999999999974    3479999


Q ss_pred             eeccc
Q 005257          511 DFGLA  515 (705)
Q Consensus       511 DFGla  515 (705)
                      ||+.+
T Consensus       152 Dg~G~  156 (210)
T PRK10345        152 DNIGE  156 (210)
T ss_pred             ECCCC
Confidence            95544

>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A

Probab=99.76  E-value=1.3e-18  Score=179.15  Aligned_cols=234  Identities=22%  Similarity=0.228  Sum_probs=153.6

Q ss_pred             CCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCC---chhHHHHHHHHHHhccCCC----------CCcceeeeeee-
Q 005257          366 FSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHEN---DGGTRAFLAEISSLGRLKH----------KSLVGLRGWCK-  431 (705)
Q Consensus       366 f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~---~~~~~~~~~Ei~~l~~l~H----------pniv~l~g~~~-  431 (705)
                      +...+.||.|+++.||.+++..+++++|||......   ....+++.+|.-.+..+.+          -.++..++... 
T Consensus        14 l~~~~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~d~~~i   93 (288)
T PF14531_consen   14 LVRGRIIGKGGFSIVFEVTDVETGEEFAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPLDLLRI   93 (288)
T ss_dssp             EEEEEEEEEETTEEEEEEEETTTTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---SEEEEE
T ss_pred             EEEccccccCCceEEEEEEEccCCceEEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeeeEEEEE
Confidence            345778999999999999999999999999876543   2345677777766666433          11221111111 


Q ss_pred             --------ecc--C-----ceEEEEeeCCCCChhHHHHh---cCC-CCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeec
Q 005257          432 --------REK--G-----SLMLVYDYMENGSLDKWIFQ---CDG-SMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHR  492 (705)
Q Consensus       432 --------~~~--~-----~~~lV~E~~~~gsL~~~L~~---~~~-~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHr  492 (705)
                              ...  .     ..+++|+-+. ++|.+++.-   ... ...+....+..+..|+++.+++||+   .+++|+
T Consensus        94 ~~~~~~~~~~~~~~~~~v~n~~~l~P~~~-~dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh~---~GlVHg  169 (288)
T PF14531_consen   94 PGKPPFFERGPGQSIYWVLNRFLLMPRAQ-GDLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLHS---YGLVHG  169 (288)
T ss_dssp             TTS-SEEEECETTEEEEEESEEEEEE--S-EEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHH---TTEEES
T ss_pred             cCCCcceecCCCCccceeehhhhccchhh-hcHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHhh---cceEec
Confidence                    100  1     2467888884 588887643   221 1245566777888999999999999   999999


Q ss_pred             CCCCCCeEEccCCCeeeeeeccceecCCCCcceeeeeeccccCCCcccccc--------CCCCccccEEEEehhHHHHhh
Q 005257          493 DIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSS--------GRASTQTDVFGFGILILEVLS  564 (705)
Q Consensus       493 DLkp~NILld~~~~~kL~DFGla~~~~~~~~~~~~~~~gt~~y~APE~~~~--------~~~s~ksDVwS~Gvvl~Ellt  564 (705)
                      ||||+|++++.+|.++|+||+.....+.....    ...+..|.+||....        -.++.+.|.|++|+++|.|+|
T Consensus       170 di~~~nfll~~~G~v~Lg~F~~~~r~g~~~~~----~~~~~~~~PPe~~~~~~~~~~~~~~~t~~~DaW~LG~~ly~lWC  245 (288)
T PF14531_consen  170 DIKPENFLLDQDGGVFLGDFSSLVRAGTRYRC----SEFPVAFTPPELESCAGQFGQNNAPYTFATDAWQLGITLYSLWC  245 (288)
T ss_dssp             T-SGGGEEE-TTS-EEE--GGGEEETTEEEEG----GGS-TTTS-HHHHHHHTSCHHSEEEE-HHHHHHHHHHHHHHHHH
T ss_pred             ccceeeEEEcCCCCEEEcChHHHeecCceeec----cCCCcccCChhhhhhhcccCcccceeeeccCHHHHHHHHHHHHH
Confidence            99999999999999999999987765432211    133577999997643        247889999999999999999


Q ss_pred             CCCCCCCCCccHHHHHHHHHHhCchhHHHHHhhhcCCCCCHHHHHHHHHHHHHcCCCCCCCC
Q 005257          565 GRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRAKGGFDEDEVERVLHLGLLCAYPDPRAR  626 (705)
Q Consensus       565 G~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~R  626 (705)
                      |+.||........               .+..+   ..+. +.++.+..|+...++.+|++|
T Consensus       246 ~~lPf~~~~~~~~---------------~~~~f---~~C~-~~Pe~v~~LI~~lL~~~~~~R  288 (288)
T PF14531_consen  246 GRLPFGLSSPEAD---------------PEWDF---SRCR-DMPEPVQFLIRGLLQRNPEDR  288 (288)
T ss_dssp             SS-STCCCGGGST---------------SGGGG---TTSS----HHHHHHHHHHT-SSGGGS
T ss_pred             ccCCCCCCCcccc---------------ccccc---hhcC-CcCHHHHHHHHHHccCCcccC
Confidence            9999975432100               00011   3344 777889999999999999987

>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]

Probab=99.74  E-value=1e-18  Score=198.85  Aligned_cols=249  Identities=20%  Similarity=0.206  Sum_probs=177.2

Q ss_pred             CCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCC-chhHHHHHHHHHH--hccCCCCCcceeeeeeeeccCceEEEE
Q 005257          365 GFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHEN-DGGTRAFLAEISS--LGRLKHKSLVGLRGWCKREKGSLMLVY  441 (705)
Q Consensus       365 ~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~-~~~~~~~~~Ei~~--l~~l~Hpniv~l~g~~~~~~~~~~lV~  441 (705)
                      ++...+.||.+.|=+|.+|++++ |. |+||++-+.. .-..+.|.++++-  ...++|||.+++..+-.. +...|||-
T Consensus        24 e~~~~~~LGstRFlKv~r~k~~e-G~-vVvKVFvk~~p~~sL~~~~qrL~~ik~~l~~~pn~lPfqk~~~t-~kAAylvR  100 (1431)
T KOG1240|consen   24 ECHYVENLGSTRFLKVARAKDRE-GL-VVVKVFVKQDPTISLRPFKQRLEEIKFALMKAPNCLPFQKVLVT-DKAAYLVR  100 (1431)
T ss_pred             ceeeecccCchhhhhhhhccCCC-ce-EEEEEEeccCCCCCchHHHHHHHHHHHHhhcCCcccchHHHHHh-hHHHHHHH
Confidence            46667889999999999999975 44 9999886554 3344555444433  444589999999887554 45678899


Q ss_pred             eeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeecccee--cC
Q 005257          442 DYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARM--HG  519 (705)
Q Consensus       442 E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~--~~  519 (705)
                      +|..+ +|.|.|..   +..+...+..=|+.|++.||.-+|.   .+|+|+|||.+||||+.=.=+.|+||..-+-  ..
T Consensus       101 qyvkh-nLyDRlST---RPFL~~iEKkWiaFQLL~al~qcH~---~gVcHGDIKsENILiTSWNW~~LtDFAsFKPtYLP  173 (1431)
T KOG1240|consen  101 QYVKH-NLYDRLST---RPFLVLIEKKWIAFQLLKALSQCHK---LGVCHGDIKSENILITSWNWLYLTDFASFKPTYLP  173 (1431)
T ss_pred             HHHhh-hhhhhhcc---chHHHHHHHHHHHHHHHHHHHHHHH---cCccccccccceEEEeeechhhhhcccccCCccCC
Confidence            99866 89888853   3367888888899999999999998   9999999999999999866689999986542  22


Q ss_pred             CCCcceeeeeec----cccCCCccccccC----------C-CCccccEEEEehhHHHHhh-CCCCCCCCCccHHHHHHHH
Q 005257          520 HGQVASTTRVVG----TVGYLAPEVFSSG----------R-ASTQTDVFGFGILILEVLS-GRRPIEEGKPNLVEMVWEL  583 (705)
Q Consensus       520 ~~~~~~~~~~~g----t~~y~APE~~~~~----------~-~s~ksDVwS~Gvvl~Ellt-G~~Pf~~~~~~~~~~v~~~  583 (705)
                      ++.....+-+-.    -..|+|||.+...          . .+++.||||+||++.||++ |++||.-     .+..  .
T Consensus       174 eDNPadf~fFFDTSrRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~PlF~L-----SQL~--a  246 (1431)
T KOG1240|consen  174 EDNPADFTFFFDTSRRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPLFTL-----SQLL--A  246 (1431)
T ss_pred             CCCcccceEEEecCCceeeecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCCCcccH-----HHHH--h
Confidence            222222111111    2469999987431          1 5788999999999999988 7777742     1111  1


Q ss_pred             HHhC--chhHHHHHhhhcCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHhc
Q 005257          584 MVQG--KLLDALDARLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLEGK  639 (705)
Q Consensus       584 ~~~~--~~~~~id~~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~  639 (705)
                      ++.|  ...+.+-+.+.         -..+..+++.+++.||++|-++++.++.-.+.
T Consensus       247 Yr~~~~~~~e~~Le~Ie---------d~~~Rnlil~Mi~rdPs~RlSAedyL~~yrG~  295 (1431)
T KOG1240|consen  247 YRSGNADDPEQLLEKIE---------DVSLRNLILSMIQRDPSKRLSAEDYLQKYRGL  295 (1431)
T ss_pred             HhccCccCHHHHHHhCc---------CccHHHHHHHHHccCchhccCHHHHHHhhhcc
Confidence            1222  11222222221         12578899999999999999999999875543

>PRK12274 serine/threonine protein kinase; Provisional

Probab=99.74  E-value=6.9e-18  Score=165.45  Aligned_cols=186  Identities=15%  Similarity=0.082  Sum_probs=137.7

Q ss_pred             CcceEEeecCceEEEEEEEcCCCeEEEEEEeccCCch----hHHHHHHHHHHhccCC-CCCcceeeeeeeeccCceEEEE
Q 005257          367 SEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDG----GTRAFLAEISSLGRLK-HKSLVGLRGWCKREKGSLMLVY  441 (705)
Q Consensus       367 ~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~~----~~~~~~~Ei~~l~~l~-Hpniv~l~g~~~~~~~~~~lV~  441 (705)
                      .....|++|+||+||.+..  .+.+++.+.+.....-    ..+.+.+|+++|++|. |+++.+++++     +..+++|
T Consensus         5 ~~~~~l~~~~f~~v~~~~~--~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~-----~~~~lvm   77 (218)
T PRK12274          5 AVNEPLKSDTFGRILLVRG--GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHW-----DGRHLDR   77 (218)
T ss_pred             ccceeecCCCcceEEEeec--CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEE-----cCEEEEE
Confidence            4567899999999997765  4677887777544321    1125789999999995 5788888885     2358999


Q ss_pred             eeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCC-CCCCeEEccCCCeeeeeeccceecCC
Q 005257          442 DYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDI-KSSNVLLDKEMNGRLGDFGLARMHGH  520 (705)
Q Consensus       442 E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDL-kp~NILld~~~~~kL~DFGla~~~~~  520 (705)
                      ||+.|.+|...+..          ....++.|++.+|.++|+   .+|+|||| ||+|||++.++.++|+|||+|.....
T Consensus        78 eyI~G~~L~~~~~~----------~~~~~~~qi~~~L~~lH~---~GIvHrDL~kp~NILv~~~g~i~LIDFG~A~~~~~  144 (218)
T PRK12274         78 SYLAGAAMYQRPPR----------GDLAYFRAARRLLQQLHR---CGVAHNDLAKEANWLVQEDGSPAVIDFQLAVRGNP  144 (218)
T ss_pred             eeecCccHHhhhhh----------hhHHHHHHHHHHHHHHHH---CcCccCCCCCcceEEEcCCCCEEEEECCCceecCC
Confidence            99999988654311          123578899999999998   99999999 79999999999999999999986554


Q ss_pred             CCcc----e--------eeeeeccccCCCcccccc--CCCCccccEEEEehhHHHHhhCCCCCCCC
Q 005257          521 GQVA----S--------TTRVVGTVGYLAPEVFSS--GRASTQTDVFGFGILILEVLSGRRPIEEG  572 (705)
Q Consensus       521 ~~~~----~--------~~~~~gt~~y~APE~~~~--~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~  572 (705)
                      ....    .        ..-...++.|++|+...-  .+.-...+.++-|+-+|.++|++.+.-.+
T Consensus       145 ~~~~~r~L~~rDl~~llk~~~~y~~~~l~~~~~~~l~~~~~~~~~w~~~g~~~~~~~~~~~~~~~~  210 (218)
T PRK12274        145 RARWMRLLAREDLRHLLKHKRMYCPAALTPVERRVLKRTSWIRELWFATGKPVYRFVTRRVLHWED  210 (218)
T ss_pred             cchHHHHHHHHHHHHHHHHHHhcCCCCCCHHHHhhhccchhHHHHHHHhcchHHHHHhccCCcccc
Confidence            3310    0        000124677778875432  22225678889999999999999887543

>cd06902 lectin_ERGIC-53_ERGL ERGIC-53 and ERGL type 1 transmembrane proteins, N-terminal lectin domain

Probab=99.71  E-value=7.8e-16  Score=154.30  Aligned_cols=200  Identities=19%  Similarity=0.204  Sum_probs=136.6

Q ss_pred             CCeEEEcceEeecCcEEecCCCCCeEEEEEcCCCccccCCCCCcccceEEEEEEEEecCCCCCCCCceEEEEeeCCCCCC
Q 005257           36 SNLSLYGTATVESRILTLTNSTTFTIGRALYPSKIPTKRPNSSYVYPFSTSFIFAMAPYKGVLAGHGLVFLFVPFHGIKG  115 (705)
Q Consensus        36 ~~~~~~g~a~~~~~~l~lt~~~~~~~Gr~~y~~pv~l~~~~~~~~~sF~t~F~f~i~~~~~~~~g~G~aF~~~~~~~~~~  115 (705)
                      ++|.+.|+|.+.++.|+||++.+++.|.+|.+.|++.        -+|+.+|+|+|.... ..+||||||+++....   
T Consensus        22 ~~W~~~G~t~~~~~~IrLTp~~~~~~G~iw~~~~~~~--------~~w~ie~~Fri~g~~-~~~gdG~a~W~t~~~~---   89 (225)
T cd06902          22 PFWSHGGDAIASLEQVRLTPSLRSKKGSVWTKNPFSF--------ENWEVEVTFRVTGRG-RIGADGLAIWYTKERG---   89 (225)
T ss_pred             CceEecccEEecCCEEEECCCCCCCEEEEeeCCCcCC--------CCEEEEEEEEEecCC-CCCCCEEEEEEECCCC---
Confidence            7899999999999999999999999999999999984        359999999998764 2468999999997632   


Q ss_pred             CCCCCcccccccCCCCCCCCcEEEEEeecccCCCCCCCCCCeeEEecCCC-cccccccccccCCCCCCCCCCCCCCCCCC
Q 005257          116 ATEAQHLGLFNRTNDGNSSNHVFGVEFDVFKNQEFNDIDENHVGIDVNSL-TSVSAHAAGYWPDNQTDSSGSNSNSGTGD  194 (705)
Q Consensus       116 ~~~g~~lGl~~~~~~~~~~~~~vaVEFDt~~n~~~~d~~~~Hvgidvns~-~S~~~~~~~~~~~~~~~~~~~~~~~~~~~  194 (705)
                       ..|+.+|-       .....-+||.|||+.|.+  ..+...|-+=+|.= +....       +.+.......+|...|+
T Consensus        90 -~~G~~~G~-------~~~f~Gl~I~~Dt~~n~~--~~~~p~i~~~~NDGt~~yd~-------~~D~~~~~~~~C~~~~r  152 (225)
T cd06902          90 -EEGPVFGS-------SDKWNGVGIFFDSFDNDG--KKNNPAILVVGNDGTKSYDH-------QNDGLTQALGSCLRDFR  152 (225)
T ss_pred             -CCCCccCC-------CCcccEEEEEEECCCCCC--CCCCcEEEEEECCCCeeccc-------cCCCcccccceEEEecc
Confidence             24555655       234567899999998863  23344564443331 11110       11111222344432222


Q ss_pred             CccccceeecCCCcceEEEEEecCceEEEEEEEccCCCCCCCceeeeecCcc-ccccceecccccccccccccceeeeee
Q 005257          195 DEKSFKELKLNNGKNYQVWIDYADSFINITMVEAGMKRPKRPLLSVPLNLSG-VLEDEMYVGFTAATGQLVESHKILAWS  273 (705)
Q Consensus       195 ~~~~~~~~~l~~g~~~~~~I~Y~~~~~~v~~~~~~~~~~~~~~ls~~vdl~~-~l~~~~~vGfsastg~~~~~h~i~~ws  273 (705)
                                +...+.++.|+|....+.|.+....  .+.......-+++.. .||+..|+||||+||...+.|.|++|+
T Consensus       153 ----------n~~~p~~~rI~Y~~~~l~V~~d~~~--~~~~~~~~~Cf~~~~v~LP~~~yfGiSA~Tg~l~d~hDIls~~  220 (225)
T cd06902         153 ----------NKPYPVRAKITYYQNVLTVSINNGF--TPNKDDYELCTRVENMVLPPNGYFGVSAATGGLADDHDVLSFL  220 (225)
T ss_pred             ----------CCCCCeEEEEEEECCeEEEEEeCCc--CCCCCcccEEEecCCeeCCCCCEEEEEecCCCCCCcEeEEEEE
Confidence                      1235789999997777888776322  222111222233333 377889999999999999999999998


Q ss_pred             ecc
Q 005257          274 FSN  276 (705)
Q Consensus       274 f~~  276 (705)
                      +.+
T Consensus       221 ~~s  223 (225)
T cd06902         221 TFS  223 (225)
T ss_pred             Eec
Confidence            864

ERGIC-53 and ERGL, N-terminal carbohydrate recognition domain. ERGIC-53 and ERGL are eukaryotic mannose-binding type 1 transmembrane proteins of the early secretory pathway that transport newly synthesized glycoproteins from the endoplasmic reticulum (ER) to the ER-Golgi intermediate compartment (ERGIC). ERGIC-53 and ERGL have an N-terminal lectin-like carbohydrate recognition domain (represented by this alignment model) as well as a C-terminal transmembrane domain. ERGIC-53 functions as a 'cargo receptor' to facilitate the export of glycoproteins with different characteristics from the ER, while the ERGIC-53-like protein (ERGL) which may act as a regulator of ERGIC-53. In mammals, ERGIC-53 forms a complex with MCFD2 (multi-coagulation factor deficiency 2) which then recruits blood coagulation factors V and VIII. Mutations in either MCFD2 or ERGIC-53 cause a mild form of inherite

>smart00090 RIO RIO-like kinase

Probab=99.70  E-value=8.1e-17  Score=164.21  Aligned_cols=142  Identities=19%  Similarity=0.219  Sum_probs=110.4

Q ss_pred             CCcceEEeecCceEEEEEE-EcCCCeEEEEEEeccCCch------------------------hHHHHHHHHHHhccCCC
Q 005257          366 FSEENVIGVGGNGKVYKGV-LEGGGAEIAVKRISHENDG------------------------GTRAFLAEISSLGRLKH  420 (705)
Q Consensus       366 f~~~~~LG~G~fg~Vy~~~-~~~~~~~vavK~i~~~~~~------------------------~~~~~~~Ei~~l~~l~H  420 (705)
                      |+..+.||+|++|.||+|. +..+|+.||||+++.....                        ....+..|++.+.++.+
T Consensus        30 ~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L~~  109 (237)
T smart00090       30 SAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRLYE  109 (237)
T ss_pred             HHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHHHh
Confidence            6778899999999999998 6667899999998754210                        01235689999999976


Q ss_pred             CC--cceeeeeeeeccCceEEEEeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCC-eeecCCCCC
Q 005257          421 KS--LVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKK-VLHRDIKSS  497 (705)
Q Consensus       421 pn--iv~l~g~~~~~~~~~~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~-iiHrDLkp~  497 (705)
                      ..  +.+++++     ...++||||+++++|...+...   ..+...+...++.|++.+|.+||+   .+ ++||||||+
T Consensus       110 ~~i~~p~~~~~-----~~~~lV~E~~~g~~L~~~~~~~---~~~~~~~~~~i~~qi~~~l~~LH~---~g~iiH~Dikp~  178 (237)
T smart00090      110 AGVPVPKPIAW-----RRNVLVMEFIGGDGLPAPRLKD---VEPEEEEEFELYDDILEEMRKLYK---EGELVHGDLSEY  178 (237)
T ss_pred             cCCCCCeeeEe-----cCceEEEEEecCCccccccccc---CCcchHHHHHHHHHHHHHHHHHHh---cCCEEeCCCChh
Confidence            33  3334432     2348999999998887654222   135566778999999999999998   88 999999999


Q ss_pred             CeEEccCCCeeeeeeccceecC
Q 005257          498 NVLLDKEMNGRLGDFGLARMHG  519 (705)
Q Consensus       498 NILld~~~~~kL~DFGla~~~~  519 (705)
                      ||+++ +++++|+|||++....
T Consensus       179 NIli~-~~~i~LiDFg~a~~~~  199 (237)
T smart00090      179 NILVH-DGKVVIIDVSQSVELD  199 (237)
T ss_pred             hEEEE-CCCEEEEEChhhhccC
Confidence            99999 8899999999987543

>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]

Probab=99.70  E-value=4e-17  Score=168.10  Aligned_cols=198  Identities=21%  Similarity=0.289  Sum_probs=142.1

Q ss_pred             CCCCcceeeeeeee--------------------------ccCceEEEEeeCCCCChhHHHHhcCCCCcccHHHHHHHHH
Q 005257          419 KHKSLVGLRGWCKR--------------------------EKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLK  472 (705)
Q Consensus       419 ~Hpniv~l~g~~~~--------------------------~~~~~~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~  472 (705)
                      +|||||++.+.+.+                          +...+|+||..++. +|..++...    ..+.....-++.
T Consensus       274 ~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~g~~~tlylvMkrY~~-tLr~yl~~~----~~s~r~~~~~la  348 (598)
T KOG4158|consen  274 KHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGAGEPKTLYLVMKRYRQ-TLREYLWTR----HRSYRTGRVILA  348 (598)
T ss_pred             CCCCEEeehhhhhhhhccCCchhhhCcccccceecccccCCCceEEEehhcchh-hHHHHHhcC----CCchHHHHHHHH
Confidence            59999998876642                          23468999999865 999999643    466777888999


Q ss_pred             HHHHHHHHHhcCCCCCeeecCCCCCCeEEc--cCC--CeeeeeeccceecCCCC-----cceeeeeeccccCCCcccccc
Q 005257          473 DVAAGVLYLHEGWEKKVLHRDIKSSNVLLD--KEM--NGRLGDFGLARMHGHGQ-----VASTTRVVGTVGYLAPEVFSS  543 (705)
Q Consensus       473 qia~gL~yLH~~~~~~iiHrDLkp~NILld--~~~--~~kL~DFGla~~~~~~~-----~~~~~~~~gt~~y~APE~~~~  543 (705)
                      |+++|+.|||.   ++|.|||+|+.|||+.  ++.  .+.|+|||++-......     .......-|...-||||+...
T Consensus       349 QlLEav~hL~~---hgvAhRDlKSDNiL~ElddD~~P~LVvaDFGCcLAd~~hGlqlpy~S~~Vd~GGNa~lmAPEi~ta  425 (598)
T KOG4158|consen  349 QLLEAVTHLHK---HGVAHRDLKSDNILLELDDDEIPQLVVADFGCCLADDNHGLQLPYESDEVDLGGNAKLMAPEIATA  425 (598)
T ss_pred             HHHHHHHHHHH---ccchhhcccccceEEEecCCCCcEEEEcccceeeeccccccccccccccccCCCcceecchhhhhc
Confidence            99999999998   9999999999999983  443  36899999985433211     111122356778999999854


Q ss_pred             C--C----CCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhHHHHHhhhcCCCCCHHHHHHHHHHHHH
Q 005257          544 G--R----ASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRAKGGFDEDEVERVLHLGLL  617 (705)
Q Consensus       544 ~--~----~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~l~~~~~~~~~~~~~l~~l~~~  617 (705)
                      .  +    .-.|+|.|+.|.+.||+++...||....+-..+..  .+++..        +   +..+..++..+.+++..
T Consensus       426 ~PGp~avvny~kAD~WA~GalaYEIfg~~NPFY~rGem~L~~r--~Yqe~q--------L---Palp~~vpp~~rqlV~~  492 (598)
T KOG4158|consen  426 VPGPNAVVNYEKADTWAAGALAYEIFGRSNPFYKRGEMLLDTR--TYQESQ--------L---PALPSRVPPVARQLVFD  492 (598)
T ss_pred             CCCCceeeccchhhhhhhhhhHHHHhccCCcccccchheechh--hhhhhh--------C---CCCcccCChHHHHHHHH
Confidence            2  2    24689999999999999999999986433211110  011111        1   22344455667888899


Q ss_pred             cCCCCCCCCCCHHHHHHHHH
Q 005257          618 CAYPDPRARPTMRQVVKVLE  637 (705)
Q Consensus       618 Cl~~dP~~RPs~~evl~~L~  637 (705)
                      .++.||++||+..-....|+
T Consensus       493 lL~r~pskRvsp~iAANvl~  512 (598)
T KOG4158|consen  493 LLKRDPSKRVSPNIAANVLN  512 (598)
T ss_pred             HhcCCccccCCccHHHhHHH
Confidence            99999999999876666554

>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]

Probab=99.69  E-value=5.4e-18  Score=181.74  Aligned_cols=173  Identities=24%  Similarity=0.416  Sum_probs=132.3

Q ss_pred             ceEEEEeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccc
Q 005257          436 SLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLA  515 (705)
Q Consensus       436 ~~~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla  515 (705)
                      +++|.|++|...+|.+||.........++.....++.|++.|+.|      ++.+|||+||.||+...+..+||+|||+.
T Consensus       330 ~lyI~Mn~c~~~tledWl~rr~~~e~~s~s~~~~~~~q~~~~~~y------k~~ihrdlkp~nif~~~d~q~kIgDFgl~  403 (516)
T KOG1033|consen  330 YLYIQMNLCEKETLEDWLRRRRTGEERSLSLMLDIFKQIAPAVEY------KGLIHRDLKPSNIFFSDDDQLKIGDFGLV  403 (516)
T ss_pred             chhhhhhhhhhhhHHHHhhCCCcccccchhHHHHHHHhhccchhh------ccchhhhccccccccccchhhhhhhhhhe
Confidence            588999999999999999876666678899999999999999999      68899999999999999999999999998


Q ss_pred             eecCCCC-----cceeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhh-CCCCCCCCCccHHHHHHHHHHhCch
Q 005257          516 RMHGHGQ-----VASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLS-GRRPIEEGKPNLVEMVWELMVQGKL  589 (705)
Q Consensus       516 ~~~~~~~-----~~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~Ellt-G~~Pf~~~~~~~~~~v~~~~~~~~~  589 (705)
                      .......     ....+..+||..||+||.+.+..|+.|+||||||++|+||+. =..++...      .....++.|.+
T Consensus       404 ts~~~~~~~~~~~a~~t~~~gt~~YmsPEQi~g~~y~~kvdIyaLGlil~EL~~~f~T~~er~------~t~~d~r~g~i  477 (516)
T KOG1033|consen  404 TSQDKDETVAPAAASHTQQVGTLLYMSPEQIRGQQYSEKVDIYALGLILAELLIQFSTQFERI------ATLTDIRDGII  477 (516)
T ss_pred             eecccCCcccchhhhhhhcccccccCCHHHHhhhhhhhhcchhhHHHHHHHHHHHhccHHHHH------HhhhhhhcCCC
Confidence            7665544     334566789999999999999999999999999999999987 22222210      01112223322


Q ss_pred             hHHHHHhhhcCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHH
Q 005257          590 LDALDARLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQ  631 (705)
Q Consensus       590 ~~~id~~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~e  631 (705)
                      ....    .  .++     ..-..+..+.+++.|.+||++.+
T Consensus       478 p~~~----~--~d~-----p~e~~ll~~lls~~p~~RP~~~~  508 (516)
T KOG1033|consen  478 PPEF----L--QDY-----PEEYTLLQQLLSPSPEERPSAIE  508 (516)
T ss_pred             ChHH----h--hcC-----cHHHHHHHHhcCCCcccCchHHH
Confidence            2111    0  111     12246778899999999995443

>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.68  E-value=7.6e-17  Score=187.63  Aligned_cols=254  Identities=22%  Similarity=0.214  Sum_probs=179.3

Q ss_pred             HHHHHHhCCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCCchhHHHHHHHHHHhccCC---CCCcceeeeeeeec
Q 005257          357 QEIEAATKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLK---HKSLVGLRGWCKRE  433 (705)
Q Consensus       357 ~el~~at~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~~~~~~~~~Ei~~l~~l~---Hpniv~l~g~~~~~  433 (705)
                      .+.+.-.+.|.+.+.||+|+||+||+|...+ ++.||+|.-+..+.   .+|.--.+++.||+   -+-|..+.....- 
T Consensus       691 ~~~~~~~~~~~I~~e~G~g~y~~vy~a~~~~-~~~~alK~e~P~~~---WEfYI~~q~~~RLk~~~~~~~~~~~~a~~~-  765 (974)
T KOG1166|consen  691 TEFEVGGEKFCISKEIGEGSYGSVYVATHSN-GKLVALKVEKPPNP---WEFYICLQVMERLKPQMLPSIMHISSAHVF-  765 (974)
T ss_pred             ceeeecceeEEEEeeeccccceEEEEeecCC-CcEEEEEeecCCCc---eeeeehHHHHHhhchhhhcchHHHHHHHcc-
Confidence            3444555678999999999999999999987 89999997654432   33433445555665   1223333332222 


Q ss_pred             cCceEEEEeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEc-------cCCC
Q 005257          434 KGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLD-------KEMN  506 (705)
Q Consensus       434 ~~~~~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld-------~~~~  506 (705)
                      .+.-+||+||.+.|+|.+++.   ..+.++|.....++.|++.-+..||.   .+|||+||||.|.||.       ++..
T Consensus       766 ~~~S~lv~ey~~~Gtlld~~N---~~~~m~e~lv~~~~~qml~ive~lH~---~~IIHgDiKPDNfll~~~~~~~~~~~~  839 (974)
T KOG1166|consen  766 QNASVLVSEYSPYGTLLDLIN---TNKVMDEYLVMFFSCQMLRIVEHLHA---MGIIHGDIKPDNFLLRREICADSDSKG  839 (974)
T ss_pred             CCcceeeeeccccccHHHhhc---cCCCCCchhhhHHHHHHHHHHHHHHh---cceecccCCcceeEeecccCCCCcccc
Confidence            345679999999999999996   33378999999999999999999998   9999999999999994       2345


Q ss_pred             eeeeeeccceecCC-CCcceeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHH
Q 005257          507 GRLGDFGLARMHGH-GQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMV  585 (705)
Q Consensus       507 ~kL~DFGla~~~~~-~~~~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~  585 (705)
                      ++|+|||.+-.+.- .........++|-.+-.+|+..+.++++++|.|.++.+++-|+.|+.--              ..
T Consensus       840 l~lIDfG~siDm~lfp~~~~F~~~~~td~f~C~EM~~grpWtYq~DyfGlAa~~h~mLFG~y~q--------------~~  905 (974)
T KOG1166|consen  840 LYLIDFGRSIDMKLFPDGTKFKAVWHTDLFDCIEMREGRPWTYQIDYFGLAATVHVMLFGKYME--------------VK  905 (974)
T ss_pred             eEEEecccceeeeEcCCCcEEeeeeccccchhHHHhcCCCCchhhhhHHHHHHHHHHHHHHHHH--------------hc
Confidence            89999999854321 1223455678899999999999999999999999999999999986431              11


Q ss_pred             hCchhHHHHHhhhcCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHhccc
Q 005257          586 QGKLLDALDARLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLEGKIE  641 (705)
Q Consensus       586 ~~~~~~~id~~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~  641 (705)
                      .|.. ..++..++  ..+..+.+..+..+++   ++|...=|...++...|++.+.
T Consensus       906 ~g~~-~~~~~~~~--Ry~~~~~W~~~F~~lL---N~~~~~~p~l~~lr~~~~~~~~  955 (974)
T KOG1166|consen  906 NGSS-WMVKTNFP--RYWKRDMWNKFFDLLL---NPDCDTLPNLQELRTELEEVLA  955 (974)
T ss_pred             CCcc-eeccccch--hhhhHHHHHHHHHHHh---CcCcccchhHHHHHHHHHHHHH
Confidence            1111 11111111  1122344444555444   3555556888888888876654

>PRK14879 serine/threonine protein kinase; Provisional

Probab=99.68  E-value=3.1e-16  Score=157.22  Aligned_cols=134  Identities=21%  Similarity=0.299  Sum_probs=111.0

Q ss_pred             eEEeecCceEEEEEEEcCCCeEEEEEEeccCCc--h------hHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEEEE
Q 005257          370 NVIGVGGNGKVYKGVLEGGGAEIAVKRISHEND--G------GTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVY  441 (705)
Q Consensus       370 ~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~--~------~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~lV~  441 (705)
                      +.||+|++|.||+|..  .+..+++|+......  .      ....+.+|+.++..++|+++.....++.. ....+++|
T Consensus         2 ~~l~~G~~~~vy~~~~--~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~-~~~~~lv~   78 (211)
T PRK14879          2 KLIKRGAEAEIYLGDF--LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVD-PENFIIVM   78 (211)
T ss_pred             cccccCceEEEEEEee--CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEe-CCCCEEEE
Confidence            5799999999999988  467799997654321  1      12457889999999999998776666654 45678999


Q ss_pred             eeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeecccee
Q 005257          442 DYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARM  517 (705)
Q Consensus       442 E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~  517 (705)
                      ||++|++|.+++...      .+ ++..++.+++.+|.+||+   .+++|+|++|.|||++ ++.++|+|||++..
T Consensus        79 e~~~G~~L~~~~~~~------~~-~~~~i~~~i~~~l~~lH~---~~i~H~Dl~p~Nil~~-~~~~~liDf~~a~~  143 (211)
T PRK14879         79 EYIEGEPLKDLINSN------GM-EELELSREIGRLVGKLHS---AGIIHGDLTTSNMILS-GGKIYLIDFGLAEF  143 (211)
T ss_pred             EEeCCcCHHHHHHhc------cH-HHHHHHHHHHHHHHHHHh---CCcccCCCCcccEEEE-CCCEEEEECCcccC
Confidence            999999999998532      22 888999999999999998   9999999999999999 78899999999864

>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated

Probab=99.66  E-value=4.6e-16  Score=177.86  Aligned_cols=141  Identities=20%  Similarity=0.266  Sum_probs=112.2

Q ss_pred             HHHhCCCCcceEEeecCceEEEEEEEcCCCeEEEEEEec-cC-Cc------hhHHHHHHHHHHhccCCCCCcceeeeeee
Q 005257          360 EAATKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRIS-HE-ND------GGTRAFLAEISSLGRLKHKSLVGLRGWCK  431 (705)
Q Consensus       360 ~~at~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~-~~-~~------~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~  431 (705)
                      ......|...+.||+|+||+||+|.+...  .+++|+.. .. ..      ...+.+.+|++++..++|++++....++.
T Consensus       329 ~~~~~~~~~~~~iG~G~~g~Vy~~~~~~~--~~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~  406 (535)
T PRK09605        329 EEVKRRKIPDHLIGKGAEADIKKGEYLGR--DAVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPVIYDV  406 (535)
T ss_pred             cccccccCccceeccCCcEEEEEEeecCc--cceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeEEEEE
Confidence            33445567789999999999999988643  34444321 11 11      12356889999999999999988777666


Q ss_pred             eccCceEEEEeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeee
Q 005257          432 REKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGD  511 (705)
Q Consensus       432 ~~~~~~~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~D  511 (705)
                      . ....++||||+++++|.+++.           ....++.+++.+|.+||+   .+++||||||+|||+ +++.++|+|
T Consensus       407 ~-~~~~~lv~E~~~g~~L~~~l~-----------~~~~~~~~i~~~L~~lH~---~giiHrDlkp~NILl-~~~~~~liD  470 (535)
T PRK09605        407 D-PEEKTIVMEYIGGKDLKDVLE-----------GNPELVRKVGEIVAKLHK---AGIVHGDLTTSNFIV-RDDRLYLID  470 (535)
T ss_pred             e-CCCCEEEEEecCCCcHHHHHH-----------HHHHHHHHHHHHHHHHHh---CCCccCCCChHHEEE-ECCcEEEEe
Confidence            5 456789999999999998874           356789999999999998   999999999999999 678999999


Q ss_pred             eccceec
Q 005257          512 FGLARMH  518 (705)
Q Consensus       512 FGla~~~  518 (705)
                      ||+++..
T Consensus       471 FGla~~~  477 (535)
T PRK09605        471 FGLGKYS  477 (535)
T ss_pred             CcccccC
Confidence            9999753

>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain

Probab=99.66  E-value=5.1e-16  Score=154.32  Aligned_cols=138  Identities=20%  Similarity=0.226  Sum_probs=108.4

Q ss_pred             CCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCCch----------------------hHHHHHHHHHHhccCCCCC
Q 005257          365 GFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDG----------------------GTRAFLAEISSLGRLKHKS  422 (705)
Q Consensus       365 ~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~~----------------------~~~~~~~Ei~~l~~l~Hpn  422 (705)
                      .|...+.||+|+||.||++... +|+.||||++......                      ....+..|+.++..+.|++
T Consensus        16 ~~~~~~~i~~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~   94 (198)
T cd05144          16 VESLGNQIGVGKESDVYLALDP-DGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALKALYEEG   94 (198)
T ss_pred             hhhcCCccccCcceEEEEEEcC-CCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHHHHHHcC
Confidence            4777889999999999999885 6899999987543210                      1123567899999998874


Q ss_pred             --cceeeeeeeeccCceEEEEeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeE
Q 005257          423 --LVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVL  500 (705)
Q Consensus       423 --iv~l~g~~~~~~~~~~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NIL  500 (705)
                        +...++     ....++||||+++++|.....         ......++.+++.++.++|+   .+++||||||+||+
T Consensus        95 i~v~~~~~-----~~~~~lv~e~~~g~~L~~~~~---------~~~~~~~~~~i~~~l~~lh~---~gi~H~Dl~p~Nil  157 (198)
T cd05144          95 FPVPKPID-----WNRHAVVMEYIDGVELYRVRV---------LEDPEEVLDEILEEIVKAYK---HGIIHGDLSEFNIL  157 (198)
T ss_pred             CCCCceee-----cCCceEEEEEeCCcchhhccc---------cccHHHHHHHHHHHHHHHHH---CCCCcCCCCcccEE
Confidence              344443     234589999999999876542         13456788999999999998   99999999999999


Q ss_pred             EccCCCeeeeeeccceecCC
Q 005257          501 LDKEMNGRLGDFGLARMHGH  520 (705)
Q Consensus       501 ld~~~~~kL~DFGla~~~~~  520 (705)
                      +++++.++|+|||++.....
T Consensus       158 l~~~~~~~liDfg~~~~~~~  177 (198)
T cd05144         158 VDDDEKIYIIDWPQMVSTDH  177 (198)
T ss_pred             EcCCCcEEEEECCccccCCC
Confidence            99999999999999965543

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom

>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]

Probab=99.66  E-value=5.9e-17  Score=184.80  Aligned_cols=208  Identities=26%  Similarity=0.342  Sum_probs=143.0

Q ss_pred             hCCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCCchhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEEEEe
Q 005257          363 TKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYD  442 (705)
Q Consensus       363 t~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~lV~E  442 (705)
                      ..+|...+.|..|+||.||..+++.+.+++|+| +++.+.     ++           +||..+-+       ..+.|  
T Consensus        82 e~df~~IklisngAygavylvrh~~trqrfa~k-iNkq~l-----il-----------Rnilt~a~-------npfvv--  135 (1205)
T KOG0606|consen   82 ESDFNTIKLISNGAYGAVYLVRHKETRQRFAMK-INKQNL-----IL-----------RNILTFAG-------NPFVV--  135 (1205)
T ss_pred             ccccceeEeeccCCCCceeeeeccccccchhhc-ccccch-----hh-----------hccccccC-------Cccee--
Confidence            457888999999999999999999888999994 432211     11           11222221       11222  


Q ss_pred             eCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecCCCC
Q 005257          443 YMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQ  522 (705)
Q Consensus       443 ~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~~~~  522 (705)
                          |+-...++..+   .++.        +++.+++|||+   .+|+|||+||.|.+|+.-|.+|+.|||+.+......
T Consensus       136 ----gDc~tllk~~g---~lPv--------dmvla~Eylh~---ygivhrdlkpdnllIT~mGhiKlTDfgLsk~GLms~  197 (1205)
T KOG0606|consen  136 ----GDCATLLKNIG---PLPV--------DMVLAVEYLHS---YGIVHRDLKPDNLLITSMGHIKLTDFGLSKKGLMSL  197 (1205)
T ss_pred             ----chhhhhcccCC---CCcc--------hhhHHhHhhcc---CCeecCCCCCCcceeeecccccccchhhhhhhhhhc
Confidence                33333343222   3333        23889999998   999999999999999999999999999986432111


Q ss_pred             --------------cceeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhhCCCCCCCCCcc-HHHHHHHHHHhC
Q 005257          523 --------------VASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPN-LVEMVWELMVQG  587 (705)
Q Consensus       523 --------------~~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~-~~~~v~~~~~~~  587 (705)
                                    ......++||+.|+|||++....|...+|.|++|+++||.+-|..||.++.+. +...+   +.  
T Consensus       198 atnl~eg~I~k~t~Ef~dKqvcgTPeyiaPeVilrqgygkpvdwwamGiIlyeFLVgcvpffGdtpeelfg~v---is--  272 (1205)
T KOG0606|consen  198 ATNLKEGHIEKDTHEFQDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQV---IS--  272 (1205)
T ss_pred             cchhhhcchHHHHHHhhhccccCCccccChhhhhhhccCCCccHHHHHHHHHHHheeeeeccCCCHHHHHhhh---hh--
Confidence                          11123469999999999999999999999999999999999999999987542 11111   10  


Q ss_pred             chhHHHHHhhhcCCCCCHHHHHHHHHHHHHcCCCCCCCCC
Q 005257          588 KLLDALDARLRAKGGFDEDEVERVLHLGLLCAYPDPRARP  627 (705)
Q Consensus       588 ~~~~~id~~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP  627 (705)
                              ......+-+.....+..+++...++.+|.+|-
T Consensus       273 --------d~i~wpE~dea~p~Ea~dli~~LL~qnp~~Rl  304 (1205)
T KOG0606|consen  273 --------DDIEWPEEDEALPPEAQDLIEQLLRQNPLCRL  304 (1205)
T ss_pred             --------hhccccccCcCCCHHHHHHHHHHHHhChHhhc
Confidence                    00000111223335567777888888999993

>TIGR03724 arch_bud32 Kae1-associated kinase Bud32

Probab=99.65  E-value=8.1e-16  Score=152.75  Aligned_cols=130  Identities=21%  Similarity=0.283  Sum_probs=104.2

Q ss_pred             EEeecCceEEEEEEEcCCCeEEEEEEeccCCc--------hhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEEEEe
Q 005257          371 VIGVGGNGKVYKGVLEGGGAEIAVKRISHEND--------GGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYD  442 (705)
Q Consensus       371 ~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~--------~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~lV~E  442 (705)
                      .||+|++|.||+|.+.  +..|++|+......        .....+.+|++++..++|+++.....++.. ....++|||
T Consensus         1 ~ig~G~~~~vy~~~~~--~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~-~~~~~lv~e   77 (199)
T TIGR03724         1 LIAKGAEAIIYLGDFL--GLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDVD-PDNKTIVME   77 (199)
T ss_pred             CCCCCceEEEEEeecC--CccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEE-CCCCEEEEE
Confidence            3899999999999864  67899998643321        113557789999999998876544444443 456689999


Q ss_pred             eCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeecccee
Q 005257          443 YMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARM  517 (705)
Q Consensus       443 ~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~  517 (705)
                      |+++++|.+++....    .      .++.+++.+|.+||+   .+++|+|++|.||+++ ++.+++.|||+++.
T Consensus        78 ~~~g~~l~~~~~~~~----~------~~~~~i~~~l~~lH~---~gi~H~Dl~~~Nil~~-~~~~~liDfg~a~~  138 (199)
T TIGR03724        78 YIEGKPLKDVIEEGN----D------ELLREIGRLVGKLHK---AGIVHGDLTTSNIIVR-DDKLYLIDFGLGKY  138 (199)
T ss_pred             EECCccHHHHHhhcH----H------HHHHHHHHHHHHHHH---CCeecCCCCcceEEEE-CCcEEEEECCCCcC
Confidence            999999998874321    1      789999999999998   9999999999999999 88999999999865

Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.

>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family

Probab=99.56  E-value=2.5e-14  Score=134.01  Aligned_cols=136  Identities=18%  Similarity=0.161  Sum_probs=112.8

Q ss_pred             cceEEeecCceEEEEEEEcCCCeEEEEEEeccCCchhHHHHHHHHHHhccCCC--CCcceeeeeeeeccCceEEEEeeCC
Q 005257          368 EENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLKH--KSLVGLRGWCKREKGSLMLVYDYME  445 (705)
Q Consensus       368 ~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~~~~~~~~~Ei~~l~~l~H--pniv~l~g~~~~~~~~~~lV~E~~~  445 (705)
                      +.+.||+|.++.||++...+  ..+++|.......  ...+.+|+..+..++|  .++.+++.+... ++..++++||++
T Consensus         2 ~~~~i~~g~~~~v~~~~~~~--~~~~iK~~~~~~~--~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~-~~~~~~v~e~~~   76 (155)
T cd05120           2 SIKLLKGGLTNRVYLLGTKD--EDYVLKINPSREK--GADREREVAILQLLARKGLPVPKVLASGES-DGWSYLLMEWIE   76 (155)
T ss_pred             cceecccccccceEEEEecC--CeEEEEecCCCCc--hhHHHHHHHHHHHHHHcCCCCCeEEEEcCC-CCccEEEEEecC
Confidence            45789999999999999864  6799998865433  5678899999999976  488888887654 467899999999


Q ss_pred             CCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceec
Q 005257          446 NGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMH  518 (705)
Q Consensus       446 ~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~  518 (705)
                      ++.+..+          +......++.+++.+|.+||.....+++|+|++|+||+++..+.+++.|||.++..
T Consensus        77 g~~~~~~----------~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~~~~~~l~Df~~~~~~  139 (155)
T cd05120          77 GETLDEV----------SEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDDGKILGIIDWEYAGYG  139 (155)
T ss_pred             CeecccC----------CHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEECCcEEEEEecccccCC
Confidence            8777543          55677788999999999999844457999999999999999899999999998753

The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves

>cd05119 RIO RIO kinase family, catalytic domain

Probab=99.54  E-value=2.8e-14  Score=140.21  Aligned_cols=138  Identities=20%  Similarity=0.241  Sum_probs=97.8

Q ss_pred             ceEEeecCceEEEEEEEcCCCeEEEEEEeccCCch--hHHHH----------------------HHHHHHhccCCCCC--
Q 005257          369 ENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDG--GTRAF----------------------LAEISSLGRLKHKS--  422 (705)
Q Consensus       369 ~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~~--~~~~~----------------------~~Ei~~l~~l~Hpn--  422 (705)
                      .+.||+|+||.||+|.+. +++.||||++......  ....+                      ..|...+.++.+..  
T Consensus         2 ~~~lg~G~~g~Vy~a~~~-~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~   80 (187)
T cd05119           2 GGPIGTGKEADVYLALDG-DGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGVP   80 (187)
T ss_pred             CcccccccceeEEEEECC-CCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCCC
Confidence            467999999999999987 6889999988654221  11111                      34555555554432  


Q ss_pred             cceeeeeeeeccCceEEEEeeCCCCChhHH-HHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEE
Q 005257          423 LVGLRGWCKREKGSLMLVYDYMENGSLDKW-IFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLL  501 (705)
Q Consensus       423 iv~l~g~~~~~~~~~~lV~E~~~~gsL~~~-L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILl  501 (705)
                      +.+.++.     ...++||||++++.+... +....    .. .+...++.+++.++.++|.  .++|+|+||||+||++
T Consensus        81 ~~~~~~~-----~~~~lv~e~~~g~~~~~~~l~~~~----~~-~~~~~~~~~~~~~l~~lh~--~~~ivH~Dl~p~Nili  148 (187)
T cd05119          81 VPKPIDL-----NRHVLVMEFIGGDGIPAPRLKDVR----LL-EDPEELYDQILELMRKLYR--EAGLVHGDLSEYNILV  148 (187)
T ss_pred             CCceEec-----CCCEEEEEEeCCCCccChhhhhhh----hc-ccHHHHHHHHHHHHHHHhh--ccCcCcCCCChhhEEE
Confidence            3333331     235899999998654321 21110    11 6678899999999999996  3899999999999999


Q ss_pred             ccCCCeeeeeeccceecCC
Q 005257          502 DKEMNGRLGDFGLARMHGH  520 (705)
Q Consensus       502 d~~~~~kL~DFGla~~~~~  520 (705)
                      + ++.++|+|||.+.....
T Consensus       149 ~-~~~~~liDfg~a~~~~~  166 (187)
T cd05119         149 D-DGKVYIIDVPQAVEIDH  166 (187)
T ss_pred             E-CCcEEEEECcccccccC
Confidence            9 88999999999975543

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct

>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed

Probab=99.53  E-value=6.2e-14  Score=143.29  Aligned_cols=136  Identities=20%  Similarity=0.232  Sum_probs=106.2

Q ss_pred             ceEEe-ecCceEEEEEEEcCCCeEEEEEEeccCC-------------chhHHHHHHHHHHhccCCCCCc--ceeeeeeee
Q 005257          369 ENVIG-VGGNGKVYKGVLEGGGAEIAVKRISHEN-------------DGGTRAFLAEISSLGRLKHKSL--VGLRGWCKR  432 (705)
Q Consensus       369 ~~~LG-~G~fg~Vy~~~~~~~~~~vavK~i~~~~-------------~~~~~~~~~Ei~~l~~l~Hpni--v~l~g~~~~  432 (705)
                      ...|| .||.|+||++...  +..++||++....             ......+.+|++++.+|+|+++  +..++++..
T Consensus        36 ~~~lg~~~g~gtv~~v~~~--~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~~~~  113 (239)
T PRK01723         36 ARVVGSAKGRGTTWFVQTP--GVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAARVV  113 (239)
T ss_pred             CceeecCCCCccEEEEEeC--CceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEeeeee
Confidence            45788 8999999999885  6779999875321             1223567889999999998885  566666543


Q ss_pred             ccCc---eEEEEeeCCC-CChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCee
Q 005257          433 EKGS---LMLVYDYMEN-GSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGR  508 (705)
Q Consensus       433 ~~~~---~~lV~E~~~~-gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~k  508 (705)
                      +...   .++|+|++++ .+|.+++...    .++..    .+.+++.+|.+||+   .+|+||||||.|||++.++.++
T Consensus       114 ~~~~~~~~~lV~e~l~G~~~L~~~l~~~----~l~~~----~~~~i~~~l~~lH~---~GI~HrDlkp~NILv~~~~~v~  182 (239)
T PRK01723        114 RHGLFYRADILIERIEGARDLVALLQEA----PLSEE----QWQAIGQLIARFHD---AGVYHADLNAHNILLDPDGKFW  182 (239)
T ss_pred             ecCcceeeeEEEEecCCCCCHHHHHhcC----CCCHH----HHHHHHHHHHHHHH---CCCCCCCCCchhEEEcCCCCEE
Confidence            3332   3599999997 6898887532    34443    36789999999998   9999999999999999988999


Q ss_pred             eeeecccee
Q 005257          509 LGDFGLARM  517 (705)
Q Consensus       509 L~DFGla~~  517 (705)
                      |+|||.++.
T Consensus       183 LIDfg~~~~  191 (239)
T PRK01723        183 LIDFDRGEL  191 (239)
T ss_pred             EEECCCccc
Confidence            999999875

>PF03388 Lectin_leg-like: Legume-like lectin family; InterPro: IPR005052 Lectins are structurally diverse proteins that bind to specific carbohydrates

Probab=99.51  E-value=5.4e-13  Score=134.90  Aligned_cols=202  Identities=19%  Similarity=0.255  Sum_probs=125.9

Q ss_pred             CCeEEEcceEeecCcEEecCCCCCeEEEEEcCCCccccCCCCCcccceEEEEEEEEecCCCCCCCCceEEEEeeCCCCCC
Q 005257           36 SNLSLYGTATVESRILTLTNSTTFTIGRALYPSKIPTKRPNSSYVYPFSTSFIFAMAPYKGVLAGHGLVFLFVPFHGIKG  115 (705)
Q Consensus        36 ~~~~~~g~a~~~~~~l~lt~~~~~~~Gr~~y~~pv~l~~~~~~~~~sF~t~F~f~i~~~~~~~~g~G~aF~~~~~~~~~~  115 (705)
                      .+|.+.|+|.+.++.|+||++.+++.|.++.+.|++.        .+|+.+|+|+|........||||||+++....   
T Consensus        22 ~~W~~~G~t~i~~~~IrLTp~~~~~~G~iws~~~~~~--------~~w~i~~~Fri~g~~~~~~g~G~a~W~t~~~~---   90 (229)
T PF03388_consen   22 PNWDIGGSTVITDNFIRLTPDRQSQSGSIWSRKPIPF--------DNWEIEFTFRISGQEKGLGGDGMAFWYTKDPG---   90 (229)
T ss_dssp             TTEEEEET-EEESSEEEEE-SSTTEEEEEEESS-BEE--------SEEEEEEEEEEESS-SSS-S-EEEEEEESSSS---
T ss_pred             CCEEECCeEEecCCEEEECCCcccCEEEEEEcCCCCc--------cCEEEEEEEEEeccccCcCCCeEEEEEEcCcc---
Confidence            5899999999999999999999999999999999988        25999999999988556689999999997543   


Q ss_pred             CCCCCcccccccCCCCCCCCcEEEEEeecccCCCCC-CCCCCeeEEecCCCcccccccccccCCCCCCCCCCCCCCCCCC
Q 005257          116 ATEAQHLGLFNRTNDGNSSNHVFGVEFDVFKNQEFN-DIDENHVGIDVNSLTSVSAHAAGYWPDNQTDSSGSNSNSGTGD  194 (705)
Q Consensus       116 ~~~g~~lGl~~~~~~~~~~~~~vaVEFDt~~n~~~~-d~~~~Hvgidvns~~S~~~~~~~~~~~~~~~~~~~~~~~~~~~  194 (705)
                       ..|..+|-       .....-+||=||||.|.+-. ......|.+-+|.-    +.....-.  +.....-++|+..|+
T Consensus        91 -~~G~~fG~-------~~~f~Gl~i~idt~~N~~~~~~~~~p~i~~~~NDG----t~~~~~~~--dg~~~~~~~C~~~~r  156 (229)
T PF03388_consen   91 -SDGPVFGG-------PDKFDGLGIFIDTYDNDEGGHKRGFPYISAMLNDG----TKSYDHDN--DGKDQSLGSCSADYR  156 (229)
T ss_dssp             -SSCSBTTB--------SS-EEEEEEEEES-TTCTTCTSTSSEEEEEEEES----SS---GGG--TTTTT-SEEEE---B
T ss_pred             -ccccccCC-------CcccceEEEEEEcccCCCcccccccceEEEEecCC----Cccccccc--cCcccccccceeccC
Confidence             25666665       23456789999999986321 12334455444431    11110010  101122233433222


Q ss_pred             CccccceeecCCCcceEEEEEecCceEEEEEEEccCCCCCCCceeeeecCccccccceecccccccccccccceeeeee
Q 005257          195 DEKSFKELKLNNGKNYQVWIDYADSFINITMVEAGMKRPKRPLLSVPLNLSGVLEDEMYVGFTAATGQLVESHKILAWS  273 (705)
Q Consensus       195 ~~~~~~~~~l~~g~~~~~~I~Y~~~~~~v~~~~~~~~~~~~~~ls~~vdl~~~l~~~~~vGfsastg~~~~~h~i~~ws  273 (705)
                                +.+.+.++.|.|....+.|.+...-.........=..++ .-.||+..|+||||+||...+.|.|++-.
T Consensus       157 ----------n~~~p~~~ri~Y~~~~l~v~id~~~~~~~~~~~~Cf~~~-~v~LP~~~yfGvSA~Tg~~~d~hdi~s~~  224 (229)
T PF03388_consen  157 ----------NSDVPTRIRISYSKNTLTVSIDSNYLKNQDDWELCFTTD-GVDLPEGYYFGVSAATGELSDNHDILSVK  224 (229)
T ss_dssp             ----------TESSEEEEEEEEETTEEEEEEETSCCSECCTTEEEEEES-TEEGGSSBEEEEEEEESSSGGEEEEEEEE
T ss_pred             ----------cCCCCEEEEEEEECCeEEEEEecccccCCcCCcEEEEcC-CeecCCCCEEEEEecCCCCCCcEEEEEEE
Confidence                      124467899999888888888632111111111111111 11367888999999999999999998853

This family includes the VIP36 and ERGIC-53 lectins. These two proteins were the first members of the family of animal lectins similar to the leguminous plant lectins []. The alignment for this family is towards the N terminus, where the similarity of VIP36 and ERGIC-53 is greatest. Although they have been identified as a family of animal lectins, this alignment also includes yeast sequences[]. ERGIC-53 is a 53kDa protein, localised to the intermediate region between the endoplasmic reticulum and the Golgi apparatus (ER-Golgi-Intermediate Compartment, ERGIC). It was identified as a calcium-dependent, mannose-specific lectin []. Its dysfunction has been associated with combined factors V and VIII deficiency, suggesting an important and substrate-specific role for ERGIC-53 in the glycoprotein-secreting pathway [,]. The L-type lectin-like domain has an overall globular shape composed of a beta-sandwich of two major twisted antiparallel beta-sheets. The beta-sandwich comprises a major concave beta-sheet and a minor convex beta-sheet, in a variation of the jelly roll fold [, , , ]. ; GO: 0016020 membrane; PDB: 3A4U_A 3LCP_B 2A6Z_A 2A71_C 2A70_B 2A6Y_A 2A6X_A 2A6W_B 2A6V_B 2E6V_B ....

>cd06903 lectin_EMP46_EMP47 EMP46 and EMP47 type 1 transmembrane proteins, N-terminal lectin domain

Probab=99.49  E-value=1.8e-12  Score=128.90  Aligned_cols=186  Identities=18%  Similarity=0.148  Sum_probs=124.6

Q ss_pred             CCeEEEcceEeecCcEEecCCCCCeEEEEEcCCCccccCCCCCcccceEEEEEEEEecCCCCCCCCceEEEEeeCCCCCC
Q 005257           36 SNLSLYGTATVESRILTLTNSTTFTIGRALYPSKIPTKRPNSSYVYPFSTSFIFAMAPYKGVLAGHGLVFLFVPFHGIKG  115 (705)
Q Consensus        36 ~~~~~~g~a~~~~~~l~lt~~~~~~~Gr~~y~~pv~l~~~~~~~~~sF~t~F~f~i~~~~~~~~g~G~aF~~~~~~~~~~  115 (705)
                      .+|.+.|+|.+.++.|+||++ +++.|.+|-+.|+++-+       +|+.+|+|+|+.... .+||||||+++...... 
T Consensus        21 ~~W~~~G~t~v~~~~IrLTp~-~s~~G~iWs~~pl~~~~-------~w~ie~~Fri~G~~~-~~gdGla~W~t~~~~~~-   90 (215)
T cd06903          21 PNWQTSGNPKLESGRIILTPP-GNQRGSLWLKKPLSLKD-------EWTIEWTFRSTGPEG-RSGGGLNFWLVKDGNAD-   90 (215)
T ss_pred             CCeEEcCcEEeeCCeEEECCC-CCceEeEeeCCcCCCCC-------CEEEEEEEEecccCC-cCCCEEEEEEECCCccc-
Confidence            689999999999999999999 99999999999998842       599999999987643 68999999999764311 


Q ss_pred             CCCC-CcccccccCCCCCCCCcEEEEEeecccCCCCCCCCCCeeEEecC-CCcccccccccccCCCCCCCCCCCCCCCCC
Q 005257          116 ATEA-QHLGLFNRTNDGNSSNHVFGVEFDVFKNQEFNDIDENHVGIDVN-SLTSVSAHAAGYWPDNQTDSSGSNSNSGTG  193 (705)
Q Consensus       116 ~~~g-~~lGl~~~~~~~~~~~~~vaVEFDt~~n~~~~d~~~~Hvgidvn-s~~S~~~~~~~~~~~~~~~~~~~~~~~~~~  193 (705)
                        .| +.+|-       .....-+||.|||+.|.   .|   .|-+-+| +-+...       ...+ +....++|...|
T Consensus        91 --~g~~~fG~-------~~~f~Gl~I~~Dt~~n~---~p---~i~~~~NDGt~~yd-------~~~d-~~~~~g~C~~~~  147 (215)
T cd06903          91 --VGTSSIYG-------PSKFDGLQLLIDNNGGS---GG---SLRGFLNDGSKDYK-------NEDV-DSLAFGSCLFAY  147 (215)
T ss_pred             --CCccccCC-------CCCCcEEEEEEECCCCC---Cc---eEEEEECCCCeecc-------ccCC-cccccceeeEec
Confidence              11 23333       23445689999999873   12   2333222 211111       1111 234445554333


Q ss_pred             CCccccceeecCCCcceEEEEEecC--ceEEEEEEEccCCCCCCCceeeeecCccccc-cceecccccccccccccceee
Q 005257          194 DDEKSFKELKLNNGKNYQVWIDYAD--SFINITMVEAGMKRPKRPLLSVPLNLSGVLE-DEMYVGFTAATGQLVESHKIL  270 (705)
Q Consensus       194 ~~~~~~~~~~l~~g~~~~~~I~Y~~--~~~~v~~~~~~~~~~~~~~ls~~vdl~~~l~-~~~~vGfsastg~~~~~h~i~  270 (705)
                      +          +.+.+.++.|.|..  ..+.|.+.  +    ...+-...|.    || ...|+||||+||...+.|.|+
T Consensus       148 r----------n~~~p~~iri~Y~~~~~~l~v~vd--~----~~Cf~~~~v~----lP~~~y~fGiSAaTg~~~d~hdIl  207 (215)
T cd06903         148 Q----------DSGVPSTIRLSYDALNSLFKVQVD--N----RLCFQTDKVQ----LPQGGYRFGITAANADNPESFEIL  207 (215)
T ss_pred             c----------CCCCCEEEEEEEECCCCEEEEEEC--C----CEEEecCCee----cCCCCCEEEEEEcCCCCCCcEEEE
Confidence            2          34558999999955  77777763  2    1111111233    55 457799999999999999999


Q ss_pred             eeee
Q 005257          271 AWSF  274 (705)
Q Consensus       271 ~wsf  274 (705)
                      +-.+
T Consensus       208 ~~~~  211 (215)
T cd06903         208 KLKV  211 (215)
T ss_pred             EEEE
Confidence            8654

EMP46 and EMP47, N-terminal carbohydrate recognition domain. EMP46 and EMP47 are fungal type-I transmembrane proteins that cycle between the endoplasmic reticulum and the golgi apparatus and are thought to function as cargo receptors that transport newly synthesized glycoproteins. EMP47 is a receptor for EMP46 responsible for the selective transport of EMP46 by forming hetero-oligomerization between the two proteins. EMP46 and EMP47 have an N-terminal lectin-like carbohydrate recognition domain (represented by this alignment model) as well as a C-terminal transmembrane domain. EMP46 and EMP47 are 45% sequence-identical to one another and have sequence homology to a class of intracellular lectins defined by ERGIC-53 and VIP36. L-type lectins have a dome-shaped beta-barrel carbohydrate recognition domain with a curved seven-stranded beta-sheet referred to as the "front face" and a flat s

>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=99.47  E-value=7.7e-15  Score=167.75  Aligned_cols=257  Identities=25%  Similarity=0.263  Sum_probs=185.6

Q ss_pred             hCCCCcceEEeecCceEEEEEEEcC-CCeEEEEEEeccCC--chhHHHHHHHHHHhccCC-CCCcceeeeeeeeccCceE
Q 005257          363 TKGFSEENVIGVGGNGKVYKGVLEG-GGAEIAVKRISHEN--DGGTRAFLAEISSLGRLK-HKSLVGLRGWCKREKGSLM  438 (705)
Q Consensus       363 t~~f~~~~~LG~G~fg~Vy~~~~~~-~~~~vavK~i~~~~--~~~~~~~~~Ei~~l~~l~-Hpniv~l~g~~~~~~~~~~  438 (705)
                      ...|...+.||+|.|+.|-...... ....+|+|.+....  .........|..+-..+. |+|++.+++.... ....+
T Consensus        19 ~~~~~~~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~~~-~~~~~   97 (601)
T KOG0590|consen   19 NSQYKLSRSIGKGSFSSSALASNSRDPESSSATKPISIPPKSEDSSEHIDTETDIQKKLSKHSNTVHMIEPSSS-PRSYL   97 (601)
T ss_pred             cccccccccccccccchhhhhhhcCCCcceeeccCCCCCCCccchhhhcCccccccccccccccccccCCccCC-Ccccc
Confidence            3456777789999999998887743 34567777776553  222334455777777776 9999999996655 66788


Q ss_pred             EEEeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHh-cCCCCCeeecCCCCCCeEEccCC-Ceeeeeeccce
Q 005257          439 LVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLH-EGWEKKVLHRDIKSSNVLLDKEM-NGRLGDFGLAR  516 (705)
Q Consensus       439 lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH-~~~~~~iiHrDLkp~NILld~~~-~~kL~DFGla~  516 (705)
                      ++.+|..++++..-+.... ....+....-.++.|+..++.|+| +   .++.||||||+|.+++..+ +.+++|||+|.
T Consensus        98 ~~~~~s~g~~~f~~i~~~~-~~~~~~~~~~~~~~ql~s~l~~~H~~---~~~~h~~ikP~n~~l~~s~~~l~~~df~~At  173 (601)
T KOG0590|consen   98 LSLSYSDGGSLFSKISHPD-STGTSSSSASRYLPQLNSGLSYLHPE---NGVTHRDIKPSNSLLDESGSALKIADFGLAT  173 (601)
T ss_pred             cccCcccccccccccccCC-ccCCCCcchhhhhhhhccCccccCcc---cccccCCCCCccchhccCCCcccCCCchhhc
Confidence            9999999999988873211 114566677889999999999999 6   9999999999999999999 99999999998


Q ss_pred             ecCC--CCcceeeeeec-cccCCCccccccC-CCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhHH
Q 005257          517 MHGH--GQVASTTRVVG-TVGYLAPEVFSSG-RASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDA  592 (705)
Q Consensus       517 ~~~~--~~~~~~~~~~g-t~~y~APE~~~~~-~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~~  592 (705)
                      .+..  +........+| ++.|+|||...+. ......|+||.|+++.-+++|..|+.......          +.....
T Consensus       174 ~~~~~~g~~~~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~l~~~~~g~~p~~~~~~~~----------~~~~~~  243 (601)
T KOG0590|consen  174 AYRNKNGAERSLKDRCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIVLSAMLTGELPWDFPSRKD----------GRYSSW  243 (601)
T ss_pred             cccccCCcceeeecccCCCCCCCCcccccchhhcCCCcccccccccccccccCCCCcccccccc----------ccceee
Confidence            7766  33334445678 9999999998874 45788999999999999999999987533211          000011


Q ss_pred             HHHhhhcCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHH
Q 005257          593 LDARLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVK  634 (705)
Q Consensus       593 id~~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~  634 (705)
                      .....................+...++..+|..|.+.+++..
T Consensus       244 ~~~~~~~~~~~~~~~~~~~~~~l~k~l~~~~~~r~s~~~~~~  285 (601)
T KOG0590|consen  244 KSNKGRFTQLPWNSISDQAHDLLHKILKENPSNRLSIEELKL  285 (601)
T ss_pred             cccccccccCccccCChhhhhcccccccCCchhccccccccc
Confidence            111000000011122344566777788899999999887654

>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase

Probab=99.37  E-value=2.3e-12  Score=143.07  Aligned_cols=143  Identities=16%  Similarity=0.164  Sum_probs=100.7

Q ss_pred             ceEEeecCceEEEEEEEcCCCeEEEEEEeccCCchhH----------------------------------------HHH
Q 005257          369 ENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGT----------------------------------------RAF  408 (705)
Q Consensus       369 ~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~~~~----------------------------------------~~~  408 (705)
                      .+.||.|++|.||+|+++ +|+.||||+.+.......                                        -+|
T Consensus       122 ~~plasaSigQVh~A~l~-~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eldf  200 (437)
T TIGR01982       122 EKPLAAASIAQVHRARLV-DGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRRELDL  200 (437)
T ss_pred             CcceeeeehhheEEEEec-CCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHHHCH
Confidence            468999999999999987 578999998754321100                                        024


Q ss_pred             HHHHHHhccCC----CCCcceeeeeeeeccCceEEEEeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHH-HHHHHhc
Q 005257          409 LAEISSLGRLK----HKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAA-GVLYLHE  483 (705)
Q Consensus       409 ~~Ei~~l~~l~----Hpniv~l~g~~~~~~~~~~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~-gL~yLH~  483 (705)
                      .+|...+.+++    |.+-+.+-.++.+.....+|||||++|++|.++......  ..   .+.+++.+++. .+..+|.
T Consensus       201 ~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~~~~~~~~~--~~---~~~~ia~~~~~~~l~ql~~  275 (437)
T TIGR01982       201 RREAANASELGENFKNDPGVYVPEVYWDRTSERVLTMEWIDGIPLSDIAALDEA--GL---DRKALAENLARSFLNQVLR  275 (437)
T ss_pred             HHHHHHHHHHHHhcCCCCCEEeCCEehhhcCCceEEEEeECCcccccHHHHHhc--CC---CHHHHHHHHHHHHHHHHHh
Confidence            44555555542    333344444443334456899999999999987653211  12   24456666666 4677887


Q ss_pred             CCCCCeeecCCCCCCeEEccCCCeeeeeeccceecCC
Q 005257          484 GWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGH  520 (705)
Q Consensus       484 ~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~~  520 (705)
                         .+++|+|++|.||+++.++.+++.|||++.....
T Consensus       276 ---~g~~H~D~hPgNilv~~~g~i~liDfG~~~~l~~  309 (437)
T TIGR01982       276 ---DGFFHADLHPGNIFVLKDGKIIALDFGIVGRLSE  309 (437)
T ss_pred             ---CCceeCCCCcccEEECCCCcEEEEeCCCeeECCH
Confidence               9999999999999999999999999999976643

This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.

>KOG1266 consensus Protein kinase [Signal transduction mechanisms]

Probab=99.33  E-value=1.3e-12  Score=132.32  Aligned_cols=205  Identities=17%  Similarity=0.293  Sum_probs=142.5

Q ss_pred             HHHhccCCCCCcceeeeeeeec----cCceEEEEeeCCCCChhHHHHhcCC-CCcccHHHHHHHHHHHHHHHHHHhcCCC
Q 005257          412 ISSLGRLKHKSLVGLRGWCKRE----KGSLMLVYDYMENGSLDKWIFQCDG-SMMLSCEERIRVLKDVAAGVLYLHEGWE  486 (705)
Q Consensus       412 i~~l~~l~Hpniv~l~g~~~~~----~~~~~lV~E~~~~gsL~~~L~~~~~-~~~l~~~~~~~i~~qia~gL~yLH~~~~  486 (705)
                      ..-|-.+-|-|||+++.|..+.    +.+..++.|||..|+|..+|++.+. ...+......+++-||..||.|||+ |.
T Consensus       118 FdnllqlvHsnlvkfH~yw~d~K~~e~~rviFiteymssgs~~~fLkrt~~~~~a~~~~~wkkw~tqIlsal~yLhs-~~  196 (458)
T KOG1266|consen  118 FDNLLQLVHSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLKQFLKRTKKNQKALFQKAWKKWCTQILSALSYLHS-CD  196 (458)
T ss_pred             HHHHHHHHHHHHHHHHHhhcccccccccceEEEEecccchhHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhc-cC
Confidence            3445566799999999987542    3467899999999999999987432 3468888999999999999999997 78


Q ss_pred             CCeeecCCCCCCeEEccCCCeeeeeeccceec---CCCCcceeeeeeccccCCCccccccCCCCccccEEEEehhHHHHh
Q 005257          487 KKVLHRDIKSSNVLLDKEMNGRLGDFGLARMH---GHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVL  563 (705)
Q Consensus       487 ~~iiHrDLkp~NILld~~~~~kL~DFGla~~~---~~~~~~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~Ell  563 (705)
                      ++|+|+++..+-|++..++-+|++----....   ............+-++|.|||.=.....+..+|||+||+..+||.
T Consensus       197 PpiihgnlTc~tifiq~ngLIkig~~ap~s~h~s~~~~~~~Ek~~~~~~~g~~a~~sg~~tn~~~a~dIy~fgmcAlema  276 (458)
T KOG1266|consen  197 PPIIHGNLTCDTIFIQHNGLIKIGSVAPDSTHPSVNSTREAEKSVNTSLPGFSAPESGTTTNTTGASDIYKFGMCALEMA  276 (458)
T ss_pred             CccccCCcchhheeecCCceEEecccCccccchhhhhhhHhhhhccccCCccccCCcCcccccccchhhhhhhHHHHHHH
Confidence            99999999999999999998887532111000   000111122245678999999877777788999999999999998


Q ss_pred             hCCCCCCCC-CccHHHHHHHHHHhCchhHHHHHhhhcCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 005257          564 SGRRPIEEG-KPNLVEMVWELMVQGKLLDALDARLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKV  635 (705)
Q Consensus       564 tG~~Pf~~~-~~~~~~~v~~~~~~~~~~~~id~~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  635 (705)
                      -+..--... ....++.        .+...+   +....       ..-...+..|++..|+.||+|++++.+
T Consensus       277 ilEiq~tnseS~~~~ee--------~ia~~i---~~len-------~lqr~~i~kcl~~eP~~rp~ar~llfH  331 (458)
T KOG1266|consen  277 ILEIQSTNSESKVEVEE--------NIANVI---IGLEN-------GLQRGSITKCLEGEPNGRPDARLLLFH  331 (458)
T ss_pred             HheeccCCCcceeehhh--------hhhhhe---eeccC-------ccccCcCcccccCCCCCCcchhhhhcC
Confidence            876542221 1111100        000000   00000       011346678999999999999998764

>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]

Probab=99.27  E-value=4.5e-12  Score=139.04  Aligned_cols=248  Identities=24%  Similarity=0.321  Sum_probs=181.8

Q ss_pred             CCCcceEEee--cCceEEEEEEE--cCCCeEEEEEEeccCCc--hhHHHHHHHHHHhccC-CCCCcceeeeeeeeccCce
Q 005257          365 GFSEENVIGV--GGNGKVYKGVL--EGGGAEIAVKRISHEND--GGTRAFLAEISSLGRL-KHKSLVGLRGWCKREKGSL  437 (705)
Q Consensus       365 ~f~~~~~LG~--G~fg~Vy~~~~--~~~~~~vavK~i~~~~~--~~~~~~~~Ei~~l~~l-~Hpniv~l~g~~~~~~~~~  437 (705)
                      .|...+.+|.  |.+|.||.+..  ...+..+|+|+-+....  .....=.+|+..-.++ .|+|.++....... .+.+
T Consensus       115 ~~~~~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~s~p~~~~~k~~~~~s~~~i~~~~~~v~~~~~~e~-~~~l  193 (524)
T KOG0601|consen  115 RFPISSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPFSPPLDSKRKLREFLSHHKIDSHENPVRDSPAWEG-SGIL  193 (524)
T ss_pred             hcccccccccCCCCCceeecccCCcccCCcccccccccCCCCCccccccccchhhcccccCccccccccCccccc-CCcc
Confidence            4566778999  99999999998  78889999998443322  3333345677777777 49999996665544 7788


Q ss_pred             EEEEeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHH----HHHHHhcCCCCCeeecCCCCCCeEEccC-CCeeeeee
Q 005257          438 MLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAA----GVLYLHEGWEKKVLHRDIKSSNVLLDKE-MNGRLGDF  512 (705)
Q Consensus       438 ~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~----gL~yLH~~~~~~iiHrDLkp~NILld~~-~~~kL~DF  512 (705)
                      ++-+|++. .+|..+.+....  .++...++....+...    ||.++|.   ..++|-|+||.||++..+ ..++++||
T Consensus       194 fiqtE~~~-~sl~~~~~~~~~--~~p~~~l~~~~~~~~~~~~~al~~~hs---~~~~~~~~kp~~i~~~~~~~s~~~~df  267 (524)
T KOG0601|consen  194 FIQTELCG-ESLQSYCHTPCN--FLPDNLLWNSLRDWLSRDVTALSHLHS---NNIVHDDLKPANIFTTSDWTSCKLTDF  267 (524)
T ss_pred             eeeecccc-chhHHhhhcccc--cCCchhhhhHHhhhhhcccccccccCC---CcccccccchhheecccccceeecCCc
Confidence            99999985 688777754322  4778888888888888    9999998   999999999999999999 88999999


Q ss_pred             ccceecCCCCcce----eeeeeccccCCCccccccCCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCc
Q 005257          513 GLARMHGHGQVAS----TTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGK  588 (705)
Q Consensus       513 Gla~~~~~~~~~~----~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~  588 (705)
                      |+...+..+....    ..+..|...|++||.+.+ -++...|+|++|.+++|..++..+...+...    .|....++.
T Consensus       268 ~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~-l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~----~W~~~r~~~  342 (524)
T KOG0601|consen  268 GLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNG-LATFASDIFSLGEVILEAILGSHLPSVGKNS----SWSQLRQGY  342 (524)
T ss_pred             ceeEEccCCccccceeeeecCCCCceEeChhhhcc-ccchHhhhcchhhhhHhhHhhcccccCCCCC----Ccccccccc
Confidence            9998877654222    222357778999998754 6788999999999999999987776544211    123333322


Q ss_pred             hhHHHHHhhhcCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHH
Q 005257          589 LLDALDARLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVK  634 (705)
Q Consensus       589 ~~~~id~~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~  634 (705)
                      +...          +...-...+.....++++.+|..|++.+.+..
T Consensus       343 ip~e----------~~~~~s~~l~~~~~~~~d~~~~~~~~~q~~~~  378 (524)
T KOG0601|consen  343 IPLE----------FCEGGSSSLRSVTSQMLDEDPRLRLTAQILTA  378 (524)
T ss_pred             Cchh----------hhcCcchhhhhHHHHhcCcchhhhhHHHHHhc
Confidence            2221          11111233444777889999999999887765

>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed

Probab=99.25  E-value=2.4e-11  Score=136.63  Aligned_cols=147  Identities=13%  Similarity=0.126  Sum_probs=96.4

Q ss_pred             hCCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCCch----------------------------------hHH--
Q 005257          363 TKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDG----------------------------------GTR--  406 (705)
Q Consensus       363 t~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~~----------------------------------~~~--  406 (705)
                      -..|+. +.||.|++|+||+|+++++|+.||||+.+.....                                  ..+  
T Consensus       119 F~~fd~-~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~l  197 (537)
T PRK04750        119 FDDFDI-KPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKTL  197 (537)
T ss_pred             HHhcCh-hhhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHH
Confidence            345766 7899999999999999987999999998643110                                  011  


Q ss_pred             ----HHHHHHHHhccCC----CCCcceeeeeeeeccCceEEEEeeCCCCChhHHH--HhcCC-CCcccHHHHHHHHHHHH
Q 005257          407 ----AFLAEISSLGRLK----HKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWI--FQCDG-SMMLSCEERIRVLKDVA  475 (705)
Q Consensus       407 ----~~~~Ei~~l~~l~----Hpniv~l~g~~~~~~~~~~lV~E~~~~gsL~~~L--~~~~~-~~~l~~~~~~~i~~qia  475 (705)
                          +|.+|...+.+++    +.+.+.+-.++.+-....+|||||++|+.+.++-  ...+. ...+....+..++.|+.
T Consensus       198 ~~ElD~~~Ea~N~~~~~~~f~~~~~v~VP~v~~d~st~~VLvmE~i~G~~l~d~~~l~~~g~d~~~la~~~v~~~~~Qif  277 (537)
T PRK04750        198 HDELDLMREAANASQLRRNFEDSDMLYVPEVYWDYCSETVMVMERMYGIPVSDVAALRAAGTDMKLLAERGVEVFFTQVF  277 (537)
T ss_pred             HHhhCHHHHHHHHHHHHHHccCCCCeecceeecccCCCceEEEeeecCccHHhHHHHHhcCCCHHHHHHHHHHHHHHHHH
Confidence                1344444444442    3333443333333334568999999999998753  22110 01233333333344432


Q ss_pred             HHHHHHhcCCCCCeeecCCCCCCeEEccCC----CeeeeeeccceecCC
Q 005257          476 AGVLYLHEGWEKKVLHRDIKSSNVLLDKEM----NGRLGDFGLARMHGH  520 (705)
Q Consensus       476 ~gL~yLH~~~~~~iiHrDLkp~NILld~~~----~~kL~DFGla~~~~~  520 (705)
                             .   .+++|+|+||.||+++.++    .+++.|||++.....
T Consensus       278 -------~---~GffHaDpHPGNIlv~~~g~~~~~i~llDFGivg~l~~  316 (537)
T PRK04750        278 -------R---DGFFHADMHPGNIFVSYDPPENPRYIALDFGIVGSLNK  316 (537)
T ss_pred             -------h---CCeeeCCCChHHeEEecCCCCCCeEEEEecceEEECCH
Confidence                   3   8999999999999999888    999999999976644

>KOG1243 consensus Protein kinase [General function prediction only]

Probab=99.20  E-value=1.4e-10  Score=128.54  Aligned_cols=171  Identities=19%  Similarity=0.297  Sum_probs=130.9

Q ss_pred             EEEEcCCCeEEEEEEeccCCchhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEEEEeeCCCCChhHHHHhcCCCCc
Q 005257          382 KGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMM  461 (705)
Q Consensus       382 ~~~~~~~~~~vavK~i~~~~~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~lV~E~~~~gsL~~~L~~~~~~~~  461 (705)
                      .|..+.++.+|.|...+..+........+-++.|+.||||||++++..... ++.+|||+|-+.  -|..++.+      
T Consensus        30 ~~t~k~~~~~vsVF~~~~~~~~~~~~~~~A~k~lKtlRHP~Il~yL~t~e~-~~~~ylvTErV~--Pl~~~lk~------  100 (690)
T KOG1243|consen   30 DGTRKADGGPVSVFVYKRSNGEVTELAKRAVKRLKTLRHPNILSYLDTTEE-EGTLYLVTERVR--PLETVLKE------  100 (690)
T ss_pred             ccceeccCCceEEEEEeCCCchhhHHHHHHHHHhhhccCchhhhhhhhhcc-cCceEEEeeccc--cHHHHHHH------
Confidence            566777888999998877766556667888999999999999999996554 779999999984  67777754      


Q ss_pred             ccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecCCCCcceeeeeeccccCCCcccc
Q 005257          462 LSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVF  541 (705)
Q Consensus       462 l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~~~~~~~~~~~~gt~~y~APE~~  541 (705)
                      +......-.+.||+.||.+||+  +.+++|++|.-.-|+++..|..||++|.++........ ......--..|..|+.+
T Consensus       101 l~~~~v~~Gl~qIl~AL~FL~~--d~~lvHgNv~~~SVfVn~~GeWkLggle~v~~~~~~~~-~~~~~~~~~s~~~P~~~  177 (690)
T KOG1243|consen  101 LGKEEVCLGLFQILAALSFLND--DCNLVHGNVCKDSVFVNESGEWKLGGLELVSKASGFNA-PAKSLYLIESFDDPEEI  177 (690)
T ss_pred             hHHHHHHHHHHHHHHHHHHHhc--cCCeeeccEeeeeEEEcCCCcEEEeeeEEEeccccCCc-ccccchhhhcccChhhc
Confidence            3455566678999999999997  58999999999999999999999999998864432221 00001112246667655


Q ss_pred             ccCCCCccccEEEEehhHHHHhhCC
Q 005257          542 SSGRASTQTDVFGFGILILEVLSGR  566 (705)
Q Consensus       542 ~~~~~s~ksDVwS~Gvvl~ElltG~  566 (705)
                      ....  -..|.|-|||+++|++.|.
T Consensus       178 ~~s~--~s~D~~~Lg~li~el~ng~  200 (690)
T KOG1243|consen  178 DPSE--WSIDSWGLGCLIEELFNGS  200 (690)
T ss_pred             Cccc--cchhhhhHHHHHHHHhCcc
Confidence            3322  4579999999999999993

>cd05151 ChoK Choline Kinase (ChoK)

Probab=99.20  E-value=5.9e-11  Score=114.39  Aligned_cols=132  Identities=17%  Similarity=0.078  Sum_probs=96.0

Q ss_pred             ceEEeecCceEEEEEEEcCCCeEEEEEEeccCCchhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEEEEeeCCCCC
Q 005257          369 ENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGS  448 (705)
Q Consensus       369 ~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~lV~E~~~~gs  448 (705)
                      .+.|+.|.++.||++...  +..+++|....... ....+..|++++..+.+.++++.+-++.  ....++||||+++.+
T Consensus         3 ~~~l~~G~~~~vy~~~~~--~~~~~lK~~~~~~~-~~~~~~~E~~~l~~l~~~~~~P~~~~~~--~~~~~lv~e~i~G~~   77 (170)
T cd05151           3 ISPLKGGMTNKNYRVEVA--NKKYVVRIPGNGTE-LLINRENEAENSKLAAEAGIGPKLYYFD--PETGVLITEFIEGSE   77 (170)
T ss_pred             eeecCCcccCceEEEEEC--CeEEEEEeCCCCcc-cccCHHHHHHHHHHHHHhCCCCceEEEe--CCCCeEEEEecCCCc
Confidence            356899999999999875  67899998754432 2234678999999987666554333232  223479999999988


Q ss_pred             hhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCC--CCCeeecCCCCCCeEEccCCCeeeeeecccee
Q 005257          449 LDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGW--EKKVLHRDIKSSNVLLDKEMNGRLGDFGLARM  517 (705)
Q Consensus       449 L~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~--~~~iiHrDLkp~NILld~~~~~kL~DFGla~~  517 (705)
                      +....           .....++.+++++|..||...  ...++|+|++|.||+++ ++.+++.|||.+..
T Consensus        78 l~~~~-----------~~~~~~~~~l~~~l~~LH~~~~~~~~~~HgD~~~~Nil~~-~~~~~liDf~~a~~  136 (170)
T cd05151          78 LLTED-----------FSDPENLEKIAKLLKKLHSSPLPDLVPCHNDLLPGNFLLD-DGRLWLIDWEYAGM  136 (170)
T ss_pred             ccccc-----------ccCHHHHHHHHHHHHHHhCCCCCCceeecCCCCcCcEEEE-CCeEEEEecccccC
Confidence            76430           111345678999999999821  12369999999999999 66899999999863

The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph

>KOG3839 consensus Lectin VIP36, involved in the transport of glycoproteins carrying high mannose-type glycans [Intracellular trafficking, secretion, and vesicular transport]

Probab=99.16  E-value=4.9e-10  Score=113.58  Aligned_cols=195  Identities=19%  Similarity=0.249  Sum_probs=134.2

Q ss_pred             CCeEEEcceEeecCcEEecCCCCCeEEEEEcCCCccccCCCCCcccceEEEEEEEEecCCCCCCCCceEEEEeeCCCCCC
Q 005257           36 SNLSLYGTATVESRILTLTNSTTFTIGRALYPSKIPTKRPNSSYVYPFSTSFIFAMAPYKGVLAGHGLVFLFVPFHGIKG  115 (705)
Q Consensus        36 ~~~~~~g~a~~~~~~l~lt~~~~~~~Gr~~y~~pv~l~~~~~~~~~sF~t~F~f~i~~~~~~~~g~G~aF~~~~~~~~~~  115 (705)
                      .+|.+.|...+...-|+||.+.+++.|.++=..||...        +|.-.+.|.|..+.....|||||+.++-...   
T Consensus        72 ~~W~~~Gstvv~~~~irLT~d~qsk~GAv~n~~Pv~s~--------~wev~v~fkv~~~s~~lfgdG~Aiw~t~Er~---  140 (351)
T KOG3839|consen   72 PNWNLSGSTVVTSNYIRLTPDEQSKSGAVWNRQPVFSR--------DWEVLVHFKVHGQSKNLFGDGMAIWYTKERA---  140 (351)
T ss_pred             cCccccccEEEEeeeeeccccccccccccccCCCcccc--------ceeEEEEEEEecCCCcccccceEEEeecccc---
Confidence            68999999999988999999999999999999999753        5999999999999888899999999987643   


Q ss_pred             CCCCCcccccccCCCCCCCCcEEEEEeecccCCCCCCCCCCe--eEEecCCCcccccccccccCCCCCCCCCCCCCCCCC
Q 005257          116 ATEAQHLGLFNRTNDGNSSNHVFGVEFDVFKNQEFNDIDENH--VGIDVNSLTSVSAHAAGYWPDNQTDSSGSNSNSGTG  193 (705)
Q Consensus       116 ~~~g~~lGl~~~~~~~~~~~~~vaVEFDt~~n~~~~d~~~~H--vgidvns~~S~~~~~~~~~~~~~~~~~~~~~~~~~~  193 (705)
                       ..|..+|-+.       ..+.+||=.|||.|.+ +-+..-|  |.+.+|..      +.+|.-+.+.-.+-..+|    
T Consensus       141 -q~GPvFG~~d-------kF~GL~vfidtY~n~~-g~~~~v~P~isvmv~~g------s~sYD~~~Dg~~tel~gc----  201 (351)
T KOG3839|consen  141 -QPGPVFGSKD-------KFTGLAVFIDTYGNHN-GPHEHVFPYISVMVNIG------SLSYDHSKDGTHTELAGC----  201 (351)
T ss_pred             -cCCCCCCCcc-------cceeEEEEEeccCCcC-CCcccceeeEEEEeccC------CcccccCCCCCccccccc----
Confidence             2566677643       3467899999998853 1122111  22222211      222222211111111112    


Q ss_pred             CCccccceeecCCCc-ceEEEEEecCceEEEEEEEccCCCCCCCceeeeecCccc-cccceecccccccccccccceeee
Q 005257          194 DDEKSFKELKLNNGK-NYQVWIDYADSFINITMVEAGMKRPKRPLLSVPLNLSGV-LEDEMYVGFTAATGQLVESHKILA  271 (705)
Q Consensus       194 ~~~~~~~~~~l~~g~-~~~~~I~Y~~~~~~v~~~~~~~~~~~~~~ls~~vdl~~~-l~~~~~vGfsastg~~~~~h~i~~  271 (705)
                             ...+++.. --.+-|.|..+++++.....+   |.  ....-.++..+ ||.--|+|+||+||...+.|.|.+
T Consensus       202 -------~a~~rn~~~dt~~~iry~~~~l~~~~dl~~---~~--~~~~c~~~n~v~lp~g~~fg~SasTGdlSd~HdivS  269 (351)
T KOG3839|consen  202 -------TANFRNLPHDTLVVIRYEKKTLSISIDLEG---PN--EWIDCFSLNNVELPLGYFFGVSASTGDLSDSHDIVS  269 (351)
T ss_pred             -------eeeeccCCCcceeEEEecCCceEEEEecCC---Cc--eeeeeeeecceecccceEEeeeeccCccchhhHHHH
Confidence                   11222221 134668898888888877654   22  24555777776 788899999999999999999988


Q ss_pred             e
Q 005257          272 W  272 (705)
Q Consensus       272 w  272 (705)
                      -
T Consensus       270 ~  270 (351)
T KOG3839|consen  270 L  270 (351)
T ss_pred             h
Confidence            6

>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain

Probab=99.10  E-value=9e-10  Score=108.20  Aligned_cols=140  Identities=16%  Similarity=0.128  Sum_probs=99.7

Q ss_pred             ceEEeecCceEEEEEEEcC------CCeEEEEEEeccCC----------------------chhHHHHH----HHHHHhc
Q 005257          369 ENVIGVGGNGKVYKGVLEG------GGAEIAVKRISHEN----------------------DGGTRAFL----AEISSLG  416 (705)
Q Consensus       369 ~~~LG~G~fg~Vy~~~~~~------~~~~vavK~i~~~~----------------------~~~~~~~~----~Ei~~l~  416 (705)
                      ...||.|--+.||.|...+      .+..+|||+.+...                      ....+.+.    +|.+.|.
T Consensus         2 ~g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~   81 (197)
T cd05146           2 NGCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLK   81 (197)
T ss_pred             CCccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHH
Confidence            3568999999999998654      35789999764321                      01122333    7999999


Q ss_pred             cCCC--CCcceeeeeeeeccCceEEEEeeCCCCChhH-HHHhcCCCCcccHHHHHHHHHHHHHHHHHH-hcCCCCCeeec
Q 005257          417 RLKH--KSLVGLRGWCKREKGSLMLVYDYMENGSLDK-WIFQCDGSMMLSCEERIRVLKDVAAGVLYL-HEGWEKKVLHR  492 (705)
Q Consensus       417 ~l~H--pniv~l~g~~~~~~~~~~lV~E~~~~gsL~~-~L~~~~~~~~l~~~~~~~i~~qia~gL~yL-H~~~~~~iiHr  492 (705)
                      ++..  -++.+.+.+     ..-+|||||+.+..+.. .+.+    ..++..+...+..+++.+|..| |.   .++||+
T Consensus        82 rl~~~Gv~vP~pi~~-----~~~~lvME~Ig~~~~~~~~Lkd----~~~~~~~~~~i~~~i~~~l~~l~H~---~glVHG  149 (197)
T cd05146          82 RMQKAGIPCPEVVVL-----KKHVLVMSFIGDDQVPAPKLKD----AKLNDEEMKNAYYQVLSMMKQLYKE---CNLVHA  149 (197)
T ss_pred             HHHHcCCCCCeEEEe-----cCCEEEEEEcCCCCccchhhhc----cccCHHHHHHHHHHHHHHHHHHHHh---CCeecC
Confidence            9854  344555543     23479999997654422 2221    1345566778889999999999 76   899999


Q ss_pred             CCCCCCeEEccCCCeeeeeeccceecCCC
Q 005257          493 DIKSSNVLLDKEMNGRLGDFGLARMHGHG  521 (705)
Q Consensus       493 DLkp~NILld~~~~~kL~DFGla~~~~~~  521 (705)
                      ||++.|||++ ++.+.|+|||.+-...+.
T Consensus       150 DLs~~NIL~~-~~~v~iIDF~qav~~~hp  177 (197)
T cd05146         150 DLSEYNMLWH-DGKVWFIDVSQSVEPTHP  177 (197)
T ss_pred             CCCHHHEEEE-CCcEEEEECCCceeCCCC
Confidence            9999999997 468999999998765543

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.

>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]

Probab=99.08  E-value=1.5e-10  Score=127.32  Aligned_cols=248  Identities=20%  Similarity=0.220  Sum_probs=170.4

Q ss_pred             HHhCCCCcceEEeecCceEEEEEEEc-CCCeEEEEEEeccCCchhHHH--HHHHHHHhccC-CCCCcceeeeeeeeccCc
Q 005257          361 AATKGFSEENVIGVGGNGKVYKGVLE-GGGAEIAVKRISHENDGGTRA--FLAEISSLGRL-KHKSLVGLRGWCKREKGS  436 (705)
Q Consensus       361 ~at~~f~~~~~LG~G~fg~Vy~~~~~-~~~~~vavK~i~~~~~~~~~~--~~~Ei~~l~~l-~Hpniv~l~g~~~~~~~~  436 (705)
                      .-+.+|.....||.|.|+.|++...+ .++..+++|.+.........+  -+.|+.+...+ .|.++++....... ...
T Consensus       262 ~~~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~-~r~  340 (524)
T KOG0601|consen  262 CKLTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIFSLGEVILEAILGSHLPSVGKNSSWSQ-LRQ  340 (524)
T ss_pred             eecCCcceeEEccCCccccceeeeecCCCCceEeChhhhccccchHhhhcchhhhhHhhHhhcccccCCCCCCccc-ccc
Confidence            34567889999999999999998876 667889999876553332222  24566555555 47777765443332 345


Q ss_pred             eEEEEeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccC-CCeeeeeeccc
Q 005257          437 LMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKE-MNGRLGDFGLA  515 (705)
Q Consensus       437 ~~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~-~~~kL~DFGla  515 (705)
                      .++--||++++++...+.   ....+.+..++++..|++.++.++|+   +.++|+|+||+||++..+ +..+++|||++
T Consensus       341 ~~ip~e~~~~~s~~l~~~---~~~~~d~~~~~~~~~q~~~~l~~i~s---~~~~~~d~~psni~i~~~~~~~~~~~~~~~  414 (524)
T KOG0601|consen  341 GYIPLEFCEGGSSSLRSV---TSQMLDEDPRLRLTAQILTALNVIHS---KLFVHLDVKPSNILISNDGFFSKLGDFGCW  414 (524)
T ss_pred             ccCchhhhcCcchhhhhH---HHHhcCcchhhhhHHHHHhccccccc---hhhhcccccccceeeccchhhhhccccccc
Confidence            568899999999877662   12267888899999999999999998   999999999999999876 88899999998


Q ss_pred             eecCCCCcceeeeeeccccCC--CccccccCCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhHHH
Q 005257          516 RMHGHGQVASTTRVVGTVGYL--APEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDAL  593 (705)
Q Consensus       516 ~~~~~~~~~~~~~~~gt~~y~--APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~~i  593 (705)
                      ..+.-.    .....+.-+++  +++......+..+.|++|||.-+.|.+++...-.....      |..+..+....  
T Consensus       415 t~~~~~----~~~~~~~~r~~p~~~~~~e~~~~~~~~~~~sl~~~~~e~~~~~~ls~~~~~------~~~i~~~~~p~--  482 (524)
T KOG0601|consen  415 TRLAFS----SGVFHHIDRLYPIAEILLEDYPHLSKADIFSLGLSVDEAITGSPLSESGVQ------SLTIRSGDTPN--  482 (524)
T ss_pred             ccccee----cccccccccccccchhhccccccccccccccccccccccccCcccCccccc------ceeeecccccC--
Confidence            642111    11112233444  44445556788999999999999999998654333221      11222222111  


Q ss_pred             HHhhhcCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHH
Q 005257          594 DARLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLE  637 (705)
Q Consensus       594 d~~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  637 (705)
                                .......+..+......+++..||.+.++..+.+
T Consensus       483 ----------~~~~~~~~q~~~kv~~~~~~~~~~l~~~l~~~~~  516 (524)
T KOG0601|consen  483 ----------LPGLKLQLQVLLKVMINPDRKRRPSAVELSLHSE  516 (524)
T ss_pred             ----------CCchHHhhhhhhhhhcCCccccchhhhhhcccch
Confidence                      1112245566666778899999999887766543

>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins

Probab=98.98  E-value=3.2e-09  Score=106.71  Aligned_cols=144  Identities=19%  Similarity=0.238  Sum_probs=109.4

Q ss_pred             ceEEeecCceEEEEEEEcCCCeEEEEEEeccCCc-hhHHHHHHHHHHhccCCCC--Ccceeeeeeeecc--CceEEEEee
Q 005257          369 ENVIGVGGNGKVYKGVLEGGGAEIAVKRISHEND-GGTRAFLAEISSLGRLKHK--SLVGLRGWCKREK--GSLMLVYDY  443 (705)
Q Consensus       369 ~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~-~~~~~~~~Ei~~l~~l~Hp--niv~l~g~~~~~~--~~~~lV~E~  443 (705)
                      .+.|+.|..+.||++...+ |+.+++|....... .....+..|.++++.+++.  ++.+++.++....  +..++||||
T Consensus         3 ~~~l~~G~~n~~~~v~~~~-g~~~ilK~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~~~~~~~v~e~   81 (223)
T cd05154           3 VRQLSGGQSNLTYLLTAGG-GRRLVLRRPPPGALLPSAHDVAREYRVLRALAGTGVPVPKVLALCEDPSVLGTPFYVMER   81 (223)
T ss_pred             ceecCCCccceEEEEEecC-CcceEEEeCCCcccCcccccHHHHHHHHHHhhCCCCCCCCEEEECCCCCccCCceEEEEE
Confidence            3568999999999998854 57899998754322 1355788999999999764  3566777654321  356899999


Q ss_pred             CCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcC---------------------------------------
Q 005257          444 MENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEG---------------------------------------  484 (705)
Q Consensus       444 ~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~---------------------------------------  484 (705)
                      +++.++...+..    ..++..++..++.+++++|..||+.                                       
T Consensus        82 i~G~~l~~~~~~----~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  157 (223)
T cd05154          82 VDGRVLRDRLLR----PELSPEERRALARALADTLAALHSVDPAAVGLGDLGRPGGYLERQVARWRRQYDASRTDEPPAM  157 (223)
T ss_pred             eCCEecCCCCCC----CCCCHHHHHHHHHHHHHHHHHHhCCChhhcCCcccCCCCchHHHHHHHHHHHHHhhcccccHHH
Confidence            999888775521    1467778888888999999888842                                       


Q ss_pred             --------------CCCCeeecCCCCCCeEEcc--CCCeeeeeecccee
Q 005257          485 --------------WEKKVLHRDIKSSNVLLDK--EMNGRLGDFGLARM  517 (705)
Q Consensus       485 --------------~~~~iiHrDLkp~NILld~--~~~~kL~DFGla~~  517 (705)
                                    ....++|+|+.|.||+++.  ++.+.|.||+.+..
T Consensus       158 ~~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~~~iID~e~~~~  206 (223)
T cd05154         158 ERLLRWLEAHLPADSRPGLVHGDYRLGNVLFHPDEPRVVAVLDWELATL  206 (223)
T ss_pred             HHHHHHHHhhCCCCCCcEEEECCCCcccEEEcCCCCcEEEEEecccccc
Confidence                          1356899999999999998  56689999998864

This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain

>KOG3838 consensus Mannose lectin ERGIC-53, involved in glycoprotein traffic [Intracellular trafficking, secretion, and vesicular transport]

Probab=98.96  E-value=2e-08  Score=103.43  Aligned_cols=193  Identities=20%  Similarity=0.287  Sum_probs=128.8

Q ss_pred             CeEEEcceEeecCcEEecCCCCCeEEEEEcCCCccccCCCCCcccceEEEEEEEEecCCCCCCCCceEEEEeeCCCCCCC
Q 005257           37 NLSLYGTATVESRILTLTNSTTFTIGRALYPSKIPTKRPNSSYVYPFSTSFIFAMAPYKGVLAGHGLVFLFVPFHGIKGA  116 (705)
Q Consensus        37 ~~~~~g~a~~~~~~l~lt~~~~~~~Gr~~y~~pv~l~~~~~~~~~sF~t~F~f~i~~~~~~~~g~G~aF~~~~~~~~~~~  116 (705)
                      -|...|||-.....|+|+++-.++.|.+|-+..+++        --|...-+|+|+..+ -.++|||||..+....    
T Consensus        55 FW~~~GdAIas~eqvRlaPSmrsrkGavWtka~~~f--------e~weVev~~rVtGrG-RiGAdGlaiWYt~~~G----  121 (497)
T KOG3838|consen   55 FWSHHGDAIASSEQVRLAPSMRSRKGAVWTKASVPF--------ENWEVEVQFRVTGRG-RIGADGLAIWYTRGRG----  121 (497)
T ss_pred             eeeecCcccccccceeeccccccccCceeecccCCc--------ccceEEEEEEecccc-cccCCceEEEEecCCC----
Confidence            488999999888899999999999999977666655        348999999999874 4579999999986532    


Q ss_pred             CCCCcccccccCCCCCCCCcEEEEEeecccCCCCCCCCCCeeEEecCCCcccccccccccCCCC-CCCCCCCCCCCCCCC
Q 005257          117 TEAQHLGLFNRTNDGNSSNHVFGVEFDVFKNQEFNDIDENHVGIDVNSLTSVSAHAAGYWPDNQ-TDSSGSNSNSGTGDD  195 (705)
Q Consensus       117 ~~g~~lGl~~~~~~~~~~~~~vaVEFDt~~n~~~~d~~~~Hvgidvns~~S~~~~~~~~~~~~~-~~~~~~~~~~~~~~~  195 (705)
                      --|..+|-.+       .=.-+++=||.|-|+  +.-|..-|.+-.|.-.    .+   |+..+ .-+-+-.+|      
T Consensus       122 ~~GpVfGg~d-------~WnGigiffDSfdnD--~qknnP~Is~~lndGt----~~---ydh~~DGasQ~LssC------  179 (497)
T KOG3838|consen  122 HVGPVFGGLD-------SWNGIGIFFDSFDND--GQKNNPAISVLLNDGT----IP---YDHPGDGASQGLSSC------  179 (497)
T ss_pred             cccccccccc-------cccceEEEeeccccc--CCcCCccEEEEecCCc----cc---ccCCCccHHHHHHHh------
Confidence            2344444322       223479999999986  4445666666554421    11   11111 001111222      


Q ss_pred             ccccceeecCCC-cceEEEEEecCceEEEEEEEccCCCCCCC-ceeeeecCcc-ccccceecccccccccccccceeeee
Q 005257          196 EKSFKELKLNNG-KNYQVWIDYADSFINITMVEAGMKRPKRP-LLSVPLNLSG-VLEDEMYVGFTAATGQLVESHKILAW  272 (705)
Q Consensus       196 ~~~~~~~~l~~g-~~~~~~I~Y~~~~~~v~~~~~~~~~~~~~-~ls~~vdl~~-~l~~~~~vGfsastg~~~~~h~i~~w  272 (705)
                           ..++.|. -++.|.|+|-...|.|.+...-  .|..+ -+-  ++... .||..-|+|.|||||....-|+|++.
T Consensus       180 -----qrDFRNkPyPvRarItY~~nvLtv~innGm--tp~d~yE~C--~rve~~~lp~nGyFGvSAATGgLADDHDVl~F  250 (497)
T KOG3838|consen  180 -----QRDFRNKPYPVRARITYYGNVLTVMINNGM--TPSDDYEFC--VRVENLLLPPNGYFGVSAATGGLADDHDVLSF  250 (497)
T ss_pred             -----hHHhccCCCCceEEEEEeccEEEEEEcCCC--CCCCCccee--EeccceeccCCCeeeeeecccccccccceeee
Confidence                 2344444 3789999998888888775432  33322 122  33333 47899999999999999999999987


Q ss_pred             e
Q 005257          273 S  273 (705)
Q Consensus       273 s  273 (705)
                      .
T Consensus       251 l  251 (497)
T KOG3838|consen  251 L  251 (497)
T ss_pred             E
Confidence            3

>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]

Probab=98.90  E-value=1.8e-08  Score=95.53  Aligned_cols=142  Identities=17%  Similarity=0.251  Sum_probs=102.4

Q ss_pred             cceEEeecCceEEEEEEEcCCCeEEEEEEeccC--C------chhHHHHHHHHHHhccCCCCCcc-eeeeeeeeccCceE
Q 005257          368 EENVIGVGGNGKVYKGVLEGGGAEIAVKRISHE--N------DGGTRAFLAEISSLGRLKHKSLV-GLRGWCKREKGSLM  438 (705)
Q Consensus       368 ~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~--~------~~~~~~~~~Ei~~l~~l~Hpniv-~l~g~~~~~~~~~~  438 (705)
                      ....|-+|+-+.|+++.+.  |+.+.||.-...  .      .-..+..++|.+.|.+++--.|. +.+-+|.  ...-.
T Consensus        11 ~l~likQGAEArv~~~~~~--Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~GI~~P~l~~~D--~~~~~   86 (229)
T KOG3087|consen   11 SLELIKQGAEARVPRGSFS--GEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRALGIPAPRLIFID--TYGGQ   86 (229)
T ss_pred             cceeeeccceeeEeeeccC--CceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEEe--cCCCe
Confidence            5678999999999999986  677788753221  1      11235678899999998755553 2232333  23346


Q ss_pred             EEEeeCCC-CChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCC---eeeeeecc
Q 005257          439 LVYDYMEN-GSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMN---GRLGDFGL  514 (705)
Q Consensus       439 lV~E~~~~-gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~---~kL~DFGl  514 (705)
                      |+|||+++ .++.+++...... .........++.+|-+.+.-||.   ..+||+||..+||+|..+++   +.+.|||+
T Consensus        87 i~ME~~~g~~~vk~~i~~~~~~-~~~d~~~~~~~~~iG~~igklH~---ndiiHGDLTTSNill~~~~~~~~~~lIdfgl  162 (229)
T KOG3087|consen   87 IYMEFIDGASTVKDFILSTMED-ESEDEGLAELARRIGELIGKLHD---NDIIHGDLTTSNILLRSDGNQITPILIDFGL  162 (229)
T ss_pred             EEEEeccchhHHHHHHHHHccC-cccchhHHHHHHHHHHHHHHhhh---CCeecccccccceEEecCCCcCceEEEeecc
Confidence            89999976 4788888664332 22333337889999999999998   99999999999999976553   58999999


Q ss_pred             cee
Q 005257          515 ARM  517 (705)
Q Consensus       515 a~~  517 (705)
                      +..
T Consensus       163 s~~  165 (229)
T KOG3087|consen  163 SSV  165 (229)
T ss_pred             hhc
Confidence            753

>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.88  E-value=1.3e-08  Score=97.01  Aligned_cols=130  Identities=21%  Similarity=0.254  Sum_probs=95.0

Q ss_pred             EEeecCceEEEEEEEcCCCeEEEEEEeccC--Cch------hHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEEEEe
Q 005257          371 VIGVGGNGKVYKGVLEGGGAEIAVKRISHE--NDG------GTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYD  442 (705)
Q Consensus       371 ~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~--~~~------~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~lV~E  442 (705)
                      .+++|+-+.+|.+.+.  |.++++|.-...  ...      ....-.+|.++|.+++--.|.--.-+..+ .+...|+||
T Consensus         3 ~i~~GAEa~i~~~~~~--g~~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~GV~~P~v~dvD-~~~~~I~me   79 (204)
T COG3642           3 LIKQGAEAIIYLTDFL--GLPAVVKERIPKRYRHPELDEKLRRERTRREARILAKAREAGVPVPIVYDVD-PDNGLIVME   79 (204)
T ss_pred             hhhCCcceeEEeeecc--CcceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEc-CCCCEEEEE
Confidence            5789999999999775  455777743222  111      12346789999999875544322222222 445679999


Q ss_pred             eCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeecccee
Q 005257          443 YMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARM  517 (705)
Q Consensus       443 ~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~  517 (705)
                      |++|-.|.+.+...          ...++..+-.-+.-||.   .+|+|+||.++||++..+. +.++||||+..
T Consensus        80 ~I~G~~lkd~l~~~----------~~~~~r~vG~~vg~lH~---~givHGDLTtsNiIl~~~~-i~~IDfGLg~~  140 (204)
T COG3642          80 YIEGELLKDALEEA----------RPDLLREVGRLVGKLHK---AGIVHGDLTTSNIILSGGR-IYFIDFGLGEF  140 (204)
T ss_pred             EeCChhHHHHHHhc----------chHHHHHHHHHHHHHHh---cCeecCCCccceEEEeCCc-EEEEECCcccc
Confidence            99999998888543          25677788888889998   9999999999999998764 99999999874

>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]

Probab=98.85  E-value=4.9e-10  Score=129.05  Aligned_cols=250  Identities=21%  Similarity=0.274  Sum_probs=164.8

Q ss_pred             HhCCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccC---CchhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceE
Q 005257          362 ATKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHE---NDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLM  438 (705)
Q Consensus       362 at~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~---~~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~  438 (705)
                      ..+.|.+.+-+-+|.++.++.+.-...+...++|.....   .....+....+-.++-..++|-++...--+. .....+
T Consensus       802 S~d~~~i~~p~qS~sp~ss~p~~pa~sgh~~~~~v~~~ap~i~~~~~~s~r~~s~~~i~p~~P~v~~~~~s~~-~rsP~~  880 (1205)
T KOG0606|consen  802 SPDGFEITKPSQSGSPSSSFPASPAGSGHTRPSKVHGLAPKIRTNDYESIRSKSNILITPRSPAVVRSFPSFP-CRSPLP  880 (1205)
T ss_pred             CCccceecccccCCCCcccccCCccccccccchhhhccchhhccccccccCCccCccccCCCCceecccCCCC-CCCCcc
Confidence            344566667778899999988877666644444443222   2222333334444444445565554443322 245789


Q ss_pred             EEEeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceec
Q 005257          439 LVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMH  518 (705)
Q Consensus       439 lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~  518 (705)
                      |+++|..+++|...|+...   ..+..-....+..+..+++|||.   ..+.|||++|.|++...++..++.|||.....
T Consensus       881 L~~~~~~~~~~~Skl~~~~---~~saepaRs~i~~~vqs~e~L~s---~~r~h~~~~p~~~l~~~~gh~~l~~~~t~~~v  954 (1205)
T KOG0606|consen  881 LVGHYLNGGDLPSKLHNSG---CLSAEPARSPILERVQSLESLHS---SLRKHRDLKPDSLLIAYDGHRPLTDFGTLSKV  954 (1205)
T ss_pred             hhhHHhccCCchhhhhcCC---CcccccccchhHHHHhhhhcccc---chhhcccccccchhhcccCCcccCcccccccc
Confidence            9999999999999887644   34555556677788899999998   66999999999999999999999999843211


Q ss_pred             C---------------------CCC----c-----ceeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhhCCCC
Q 005257          519 G---------------------HGQ----V-----ASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRP  568 (705)
Q Consensus       519 ~---------------------~~~----~-----~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~P  568 (705)
                      .                     ...    .     .......||+.|.+||.+.+......+|.|+.|++++|.++|..|
T Consensus       955 g~~~p~~~~sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~laPe~~lg~~hgs~ad~~~~g~~l~e~l~g~pp 1034 (1205)
T KOG0606|consen  955 GLIPPTTDLSGPSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDYLAPEILLGRRHGSAADWWSSGVCLFEVLTGIPP 1034 (1205)
T ss_pred             ccccCcCCcccccccCccccccccccccccccchhhccccccCCCcccCCcccccccCCCcchhhhhhhhhhhhhcCCCC
Confidence            0                     000    0     112235789999999999999999999999999999999999999


Q ss_pred             CCCCCccHHHHHHHHHHhCchhHHHHHhhhcCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHH
Q 005257          569 IEEGKPNLVEMVWELMVQGKLLDALDARLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMR  630 (705)
Q Consensus       569 f~~~~~~~~~~v~~~~~~~~~~~~id~~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~  630 (705)
                      |....+.   .+.+.+..+.+         ....-+.........++...+..+|.+|-.+.
T Consensus      1035 ~na~tpq---~~f~ni~~~~~---------~~p~g~~~~s~~aq~~~~~ll~~~~~qr~~a~ 1084 (1205)
T KOG0606|consen 1035 FNAETPQ---QIFENILNRDI---------PWPEGPEEGSYEAQDLINRLLTEEPTQRLGAK 1084 (1205)
T ss_pred             CCCcchh---hhhhccccCCC---------CCCCCccccChhhhhhhhhhhccCchhccCcc
Confidence            9875432   12222222211         11222233334455566666667787776554

>KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification]

Probab=98.80  E-value=4.6e-08  Score=105.56  Aligned_cols=171  Identities=20%  Similarity=0.305  Sum_probs=132.6

Q ss_pred             ceEEEEEEEcCCCeEEEEEEeccCCchhHHHHHHHHHHhccCCCCCcceeeeeeee---ccCceEEEEeeCCC-CChhHH
Q 005257          377 NGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKR---EKGSLMLVYDYMEN-GSLDKW  452 (705)
Q Consensus       377 fg~Vy~~~~~~~~~~vavK~i~~~~~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~---~~~~~~lV~E~~~~-gsL~~~  452 (705)
                      -.+.||+...-+|..+++|+++....+.......-++.++++.|+|+|++..++..   .+..+++||+|+++ ++|.++
T Consensus       289 ~~Ttyk~~s~~DG~~YvLkRlhg~r~~~~nk~t~lve~wkkl~h~NvV~frevf~t~tF~D~SlvlvYDYyP~s~TL~d~  368 (655)
T KOG3741|consen  289 SITTYKATSNVDGNAYVLKRLHGDRDQSTNKDTSLVEAWKKLCHTNVVPFREVFLTYTFGDLSLVLVYDYYPSSPTLYDL  368 (655)
T ss_pred             cceeEeeeeccCCceeeeeeeccccccCcccchHHHHHHHHhccCceeehhhhhhhhccCcceEEEEEecCCCCchHHHH
Confidence            46899999999999999999965554444444566889999999999999987752   24578999999985 467665


Q ss_pred             HHhcC------------CCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecCC
Q 005257          453 IFQCD------------GSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGH  520 (705)
Q Consensus       453 L~~~~------------~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~~  520 (705)
                      -+...            .....++..+|.++.|+..||.++|+   .|+.-+-|.+++||++.+.+++|+..|.......
T Consensus       369 ~F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIHs---sGLAck~L~~~kIlv~G~~RIriS~C~i~Dvl~~  445 (655)
T KOG3741|consen  369 YFANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIHS---SGLACKTLDLKKILVTGKMRIRISGCGIMDVLQE  445 (655)
T ss_pred             HccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHh---cCceeecccHhHeEeeCcceEEEecccceeeecC
Confidence            54321            11257889999999999999999999   8999999999999999999999999888776544


Q ss_pred             CCcceeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhhCCCC
Q 005257          521 GQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRP  568 (705)
Q Consensus       521 ~~~~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~P  568 (705)
                      +..               |-+.   --.+-|.=.||.+++.|.||..-
T Consensus       446 d~~---------------~~le---~~Qq~D~~~lG~ll~aLAt~~~n  475 (655)
T KOG3741|consen  446 DPT---------------EPLE---SQQQNDLRDLGLLLLALATGTEN  475 (655)
T ss_pred             CCC---------------cchh---HHhhhhHHHHHHHHHHHhhcccc
Confidence            330               1111   12356777899999999999654

>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional

Probab=98.73  E-value=1.8e-07  Score=96.88  Aligned_cols=142  Identities=16%  Similarity=0.112  Sum_probs=100.5

Q ss_pred             eEEeecCceEEEEEEEcCCCeEEEEEEeccCCch-hH----------HHHHHHHHHhccCCCCCc--ceeeeeeeec---
Q 005257          370 NVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDG-GT----------RAFLAEISSLGRLKHKSL--VGLRGWCKRE---  433 (705)
Q Consensus       370 ~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~~-~~----------~~~~~Ei~~l~~l~Hpni--v~l~g~~~~~---  433 (705)
                      +.+-.-....|+++...  |+.+.||+....... ..          ..+.+|...+.+|...+|  .+.+++....   
T Consensus        28 e~v~~~~~rrvvr~~~~--g~~~~vKr~~~~~~~~~~k~l~~~~~p~~~a~rE~~~l~~L~~~GIptP~pVa~~e~~~~~  105 (268)
T PRK15123         28 EVFRELEGRRTLRFELA--GKSYFLKWHRGTGWGEIFKNLLSLRMPVLGADREWRAIHRLHEVGVDTMTGVAFGERGSNP  105 (268)
T ss_pred             cEEecCCCceEEEEEEC--CEEEEEEEecCCcHHHHhhhhcccccccHHHHHHHHHHHHHHHcCCCCCCeeEEEEecCCC
Confidence            44554444557777663  678999976433211 11          137789999888854443  3344443321   


Q ss_pred             -cCceEEEEeeCCCC-ChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEcc-------C
Q 005257          434 -KGSLMLVYDYMENG-SLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDK-------E  504 (705)
Q Consensus       434 -~~~~~lV~E~~~~g-sL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~-------~  504 (705)
                       ...-+||+|++++- +|.+++..... ...+...+..++.+++..+.-||.   .+|+|+|++++|||++.       +
T Consensus       106 ~~~~s~LVte~l~~~~sL~~~~~~~~~-~~~~~~~~~~ll~~la~~i~~LH~---~Gi~HgDL~~~NiLl~~~~~~~~~~  181 (268)
T PRK15123        106 ATRTSFIITEDLAPTISLEDYCADWAT-NPPDPRLKRMLIKRVATMVRDMHA---AGINHRDCYICHFLLHLPFPGREED  181 (268)
T ss_pred             ccceeEEEEeeCCCCccHHHHHHhhcc-cCCCHHHHHHHHHHHHHHHHHHHH---CcCccCCCChhhEEEeccccCCCCC
Confidence             22468999999876 89998854322 245667788999999999999998   99999999999999975       4


Q ss_pred             CCeeeeeecccee
Q 005257          505 MNGRLGDFGLARM  517 (705)
Q Consensus       505 ~~~kL~DFGla~~  517 (705)
                      ..+.|+||+.++.
T Consensus       182 ~~~~LIDl~r~~~  194 (268)
T PRK15123        182 LKLSVIDLHRAQI  194 (268)
T ss_pred             ceEEEEECCcccc
Confidence            6789999998864

>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases

Probab=98.63  E-value=3.5e-07  Score=89.55  Aligned_cols=127  Identities=24%  Similarity=0.332  Sum_probs=81.5

Q ss_pred             EEEEEEEcCCCeEEEEEEeccCC--------------c--------h----hHHHHHHHHHHhccCCCCC--cceeeeee
Q 005257          379 KVYKGVLEGGGAEIAVKRISHEN--------------D--------G----GTRAFLAEISSLGRLKHKS--LVGLRGWC  430 (705)
Q Consensus       379 ~Vy~~~~~~~~~~vavK~i~~~~--------------~--------~----~~~~~~~Ei~~l~~l~Hpn--iv~l~g~~  430 (705)
                      .||.|... ++..+|||..+...              .        .    ......+|.+.|.++...+  +.+.+.+ 
T Consensus         1 ~Vy~~~~~-~~~~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~~Gv~vP~p~~~-   78 (188)
T PF01163_consen    1 DVYHAIDP-DGEEVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYEAGVPVPKPYDY-   78 (188)
T ss_dssp             EEEEEEEC-TTEEEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHCCCTT-SS--EEEE-
T ss_pred             CEEEEECC-CCCEEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHHHHCCccCCcEEEE-
Confidence            48999885 47799999864320              0        0    0123567999999997664  4455543 


Q ss_pred             eeccCceEEEEeeCC--CCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHH-HhcCCCCCeeecCCCCCCeEEccCCCe
Q 005257          431 KREKGSLMLVYDYME--NGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLY-LHEGWEKKVLHRDIKSSNVLLDKEMNG  507 (705)
Q Consensus       431 ~~~~~~~~lV~E~~~--~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~y-LH~~~~~~iiHrDLkp~NILld~~~~~  507 (705)
                       .   .-+|||||++  +..+..+. ..    .++..+...++.+++..+.. +|.   .+++|+||.+.|||++++ .+
T Consensus        79 -~---~~~ivME~I~~~G~~~~~l~-~~----~~~~~~~~~~~~~il~~~~~~~~~---~givHGDLs~~NIlv~~~-~~  145 (188)
T PF01163_consen   79 -N---RNVIVMEYIGEDGVPLPRLK-DV----DLSPEEPKELLEEILEEIIKMLHK---AGIVHGDLSEYNILVDDG-KV  145 (188)
T ss_dssp             -E---TTEEEEE--EETTEEGGCHH-HC----GGGGSTHHHHHHHHHHHHHHHHHC---TTEEESS-STTSEEEETT-CE
T ss_pred             -e---CCEEEEEecCCCccchhhHH-hc----cccchhHHHHHHHHHHHHHHHHHh---cCceecCCChhhEEeecc-eE
Confidence             1   2379999998  54554433 21    12245566778888886666 466   999999999999999988 99


Q ss_pred             eeeeeccceecCC
Q 005257          508 RLGDFGLARMHGH  520 (705)
Q Consensus       508 kL~DFGla~~~~~  520 (705)
                      .|+|||.+....+
T Consensus       146 ~iIDf~qav~~~~  158 (188)
T PF01163_consen  146 YIIDFGQAVDSSH  158 (188)
T ss_dssp             EE--GTTEEETTS
T ss_pred             EEEecCcceecCC
Confidence            9999999876543

Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.

>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]

Probab=98.51  E-value=2.5e-06  Score=90.15  Aligned_cols=260  Identities=18%  Similarity=0.196  Sum_probs=161.4

Q ss_pred             CcceEEeecCceEEEEEEEcCCCeEEEEEEeccCCchhHHHHHHHHHHhccC-CCCCcceeeeee------eeccCceEE
Q 005257          367 SEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRL-KHKSLVGLRGWC------KREKGSLML  439 (705)
Q Consensus       367 ~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~~~~~~~~~Ei~~l~~l-~Hpniv~l~g~~------~~~~~~~~l  439 (705)
                      ...+.||+|+-+.+|-.---   ...+-|+..........+..   ..|... .||-+-.-+.|=      -++.....+
T Consensus        14 ~~gr~LgqGgea~ly~l~e~---~d~VAKIYh~Pppa~~aqk~---a~la~~p~~p~~~~rvaWPqa~L~G~~~~~~iGf   87 (637)
T COG4248          14 PPGRPLGQGGEADLYTLGEV---RDQVAKIYHAPPPAAQAQKV---AELAATPDAPLLNYRVAWPQATLHGGRRGKVIGF   87 (637)
T ss_pred             CCCccccCCccceeeecchh---hchhheeecCCCchHHHHHH---HHhccCCCCcchhhhhcccHHHhhCCCccceeEE
Confidence            34677999999999964322   12455777655443333322   233333 566443322221      122223677


Q ss_pred             EEeeCCCCCh-hHHHH---hcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccc
Q 005257          440 VYDYMENGSL-DKWIF---QCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLA  515 (705)
Q Consensus       440 V~E~~~~gsL-~~~L~---~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla  515 (705)
                      .|..+++..= ..++.   +........|.-.++.++.+|.+.+-||+   .|.+-+|+.++|+|+.+++.+.|.|=..-
T Consensus        88 lmP~v~g~~pI~~~y~p~tRRqs~P~~~w~fllrvaRnlA~aFA~lH~---~Gh~vGDVn~~~~lVsd~~~V~LVdsDsf  164 (637)
T COG4248          88 LMPKVSGKEPIHMIYSPATRRQSYPHCAWDFLLRVARNLASAFATLHE---HGHVVGDVNQNSFLVSDDSKVVLVDSDSF  164 (637)
T ss_pred             ecccCCCccchhhhcCchhhcccCCccccHHHHHHHHHHHHHHHHHHh---cCCcccccCccceeeecCceEEEEcccce
Confidence            8888766422 22221   11222357899999999999999999998   99999999999999999999999885544


Q ss_pred             eecCCCCcceeeeeeccccCCCccccc-----cCCCCccccEEEEehhHHHHhhC-CCCCCCC-----CccHHHHHHHHH
Q 005257          516 RMHGHGQVASTTRVVGTVGYLAPEVFS-----SGRASTQTDVFGFGILILEVLSG-RRPIEEG-----KPNLVEMVWELM  584 (705)
Q Consensus       516 ~~~~~~~~~~~~~~~gt~~y~APE~~~-----~~~~s~ksDVwS~Gvvl~ElltG-~~Pf~~~-----~~~~~~~v~~~~  584 (705)
                      ....++..  ....+|...|.+||.-.     +...+...|-|.+|+++++++.| ++||.+.     .++..+   ..+
T Consensus       165 qi~~ng~~--~~cpVg~~eftPPElQ~~~sf~g~~r~~~hD~FGLavLiF~lL~ggrHPysGI~~~~~ap~p~E---~~I  239 (637)
T COG4248         165 QINANGTL--HLCPVGVSEFTPPELQTLPSFVGFERTANHDNFGLAVLIFHLLFGGRHPYSGIPLISDAPNPLE---TDI  239 (637)
T ss_pred             eeccCCce--EecccCccccCCHHHhccccccccCCCccccchhHHHHHHHHHhcCCCCCCcccccCCCCCcch---hhh
Confidence            44333322  22347889999999754     34567889999999999999885 9999752     111111   123


Q ss_pred             HhCchhHHHHHhhhc---CCCCCHH-HHHHHHHHHHHcCCC--CCCCCCCHHHHHHHHHhcc
Q 005257          585 VQGKLLDALDARLRA---KGGFDED-EVERVLHLGLLCAYP--DPRARPTMRQVVKVLEGKI  640 (705)
Q Consensus       585 ~~~~~~~~id~~l~~---~~~~~~~-~~~~l~~l~~~Cl~~--dP~~RPs~~evl~~L~~~~  640 (705)
                      ..|.....-+.+...   ...++-. ....+..+..+|...  ++.-|||++..+..|..+.
T Consensus       240 a~g~f~ya~~~~~g~~p~P~~~P~~~Lpp~vqAlF~qaF~~~~~~~~RP~a~aW~aAl~al~  301 (637)
T COG4248         240 AHGRFAYASDQRRGLKPPPRSIPLSMLPPDVQALFQQAFTESGVATPRPTAKAWVAALDALR  301 (637)
T ss_pred             hcceeeechhccCCCCCCCCCCChhhcCHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHHH
Confidence            334443333322211   1122222 124566677778753  4778999999988876543

>KOG2137 consensus Protein kinase [Signal transduction mechanisms]

Probab=98.47  E-value=1e-07  Score=106.63  Aligned_cols=151  Identities=22%  Similarity=0.351  Sum_probs=102.3

Q ss_pred             HHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecCCCCcce----e----eeeeccccCCCccccc
Q 005257          471 LKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVAS----T----TRVVGTVGYLAPEVFS  542 (705)
Q Consensus       471 ~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~~~~~~~----~----~~~~gt~~y~APE~~~  542 (705)
                      +.+++.||.|+|.  ..++||++|.|++|.++.++..||+.|+.+..........    .    .-..-...|.|||++.
T Consensus       105 l~~v~dgl~flh~--sAk~VH~ni~p~~i~~na~~~wkl~Gf~f~v~~~~~~~~p~~~yd~~lp~~~~~~~~f~apE~~~  182 (700)
T KOG2137|consen  105 LGNVADGLAFLHR--SAKVVHGNIQPEAIVVNANGDWKLAGFSFCVNANGPTEYPFSEYDPPLPLLLQPHLNFLAPEYLL  182 (700)
T ss_pred             hhcccchhhhhcc--CcceeecccchhheeeccCcceeeccchhhhccCCCCccccccCCCCCChhhccCcccccchhhc
Confidence            3456699999998  5899999999999999999999999999875443311100    0    0012345799999999


Q ss_pred             cCCCCccccEEEEehhHHHHhhCCCC-CCCCCccHHHHHHHHHHhCchhHHHHHhhhcCCCCCHHHHHHHHHHHHHcCCC
Q 005257          543 SGRASTQTDVFGFGILILEVLSGRRP-IEEGKPNLVEMVWELMVQGKLLDALDARLRAKGGFDEDEVERVLHLGLLCAYP  621 (705)
Q Consensus       543 ~~~~s~ksDVwS~Gvvl~ElltG~~P-f~~~~~~~~~~v~~~~~~~~~~~~id~~l~~~~~~~~~~~~~l~~l~~~Cl~~  621 (705)
                      ....+.++|+||+||++|-+..|..+ +......+ ..-    ..+..   .+...   ..++...+.++.+-+.+.+..
T Consensus       183 ~~~~~~~sd~fSlG~li~~i~~~gk~i~~a~~~~~-~~~----~~~~~---~~~~~---~~~s~~~p~el~~~l~k~l~~  251 (700)
T KOG2137|consen  183 GTTNTPASDVFSLGVLIYTIYNGGKSIIAANGGLL-SYS----FSRNL---LNAGA---FGYSNNLPSELRESLKKLLNG  251 (700)
T ss_pred             cccccccccceeeeeEEEEEecCCcchhhccCCcc-hhh----hhhcc---ccccc---ccccccCcHHHHHHHHHHhcC
Confidence            88899999999999999999854444 43322111 000    00000   00011   223344556677777788899


Q ss_pred             CCCCCCCHHHHHH
Q 005257          622 DPRARPTMRQVVK  634 (705)
Q Consensus       622 dP~~RPs~~evl~  634 (705)
                      ++..||++.++..
T Consensus       252 ~~~~rp~~~~l~~  264 (700)
T KOG2137|consen  252 DSAVRPTLDLLLS  264 (700)
T ss_pred             CcccCcchhhhhc
Confidence            9999998877654

>cd06900 lectin_VcfQ VcfQ bacterial pilus biogenesis protein, lectin domain

Probab=98.45  E-value=1.1e-05  Score=79.57  Aligned_cols=95  Identities=14%  Similarity=0.132  Sum_probs=71.2

Q ss_pred             ecCcEEecCCCCCeEEEEEcCCCccccCCCCCcccceEEEEEEEEecCCCCCCCCceEEEEeeCCC-CCCCCCCCccccc
Q 005257           47 ESRILTLTNSTTFTIGRALYPSKIPTKRPNSSYVYPFSTSFIFAMAPYKGVLAGHGLVFLFVPFHG-IKGATEAQHLGLF  125 (705)
Q Consensus        47 ~~~~l~lt~~~~~~~Gr~~y~~pv~l~~~~~~~~~sF~t~F~f~i~~~~~~~~g~G~aF~~~~~~~-~~~~~~g~~lGl~  125 (705)
                      .++.||||+...++.|-+.|.+++|--+.      -...+|.+..-.. ...++||+||||+--.. ...+..||.||+-
T Consensus        30 ~~g~LRLT~~~~nqata~~~~~~FPs~~n------~v~veFd~yayg~-~g~GADGia~vLsDasv~p~~G~fGGsLGYa  102 (255)
T cd06900          30 VNNRLRLTDASGNQATAVTLQRLFPSAGN------YVEVEFDYYAYGS-GGNGADGVALVLSDASVTPQAGAFGGSLGYA  102 (255)
T ss_pred             ccCeEEeccCccCcceeEEEeeeeccCCC------eEEEEEEEEEecC-CCCCCceEEEEEeCCCcCCcCCCcCcccccc
Confidence            48999999999999999999999987432      2777888877654 45589999999984322 2245678899997


Q ss_pred             ccC-CCCCCCCcEEEEEeecccCC
Q 005257          126 NRT-NDGNSSNHVFGVEFDVFKNQ  148 (705)
Q Consensus       126 ~~~-~~~~~~~~~vaVEFDt~~n~  148 (705)
                      .++ .........++|-||-|-|.
T Consensus       103 ~~~~~~~GfaGGwLGiGlDEyGNF  126 (255)
T cd06900         103 QRNDGVPGFAGGWLGIGLDEYGNF  126 (255)
T ss_pred             cccCCCCccccceEEEEEeccccc
Confidence            664 23335667889999987773

This family includes bacterial proteins homologous to the VcfQ (also known as MshQ) bacterial pilus biogenesis protein. VcfQ is encoded by the vcfQ gene of the type IV pilus gene cluster of Vibrio cholerae and is essential for type IV pilus assembly. VcfQ has a Laminin G-like domain as well as an L-type lectin domain.

>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]

Probab=98.43  E-value=1.3e-06  Score=88.27  Aligned_cols=137  Identities=23%  Similarity=0.269  Sum_probs=95.2

Q ss_pred             CcceEEeecCceEEEEEEEcCCCeEEEEEEeccCCc----------------------hhHHHHHHHHHHhccCCCC--C
Q 005257          367 SEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHEND----------------------GGTRAFLAEISSLGRLKHK--S  422 (705)
Q Consensus       367 ~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~----------------------~~~~~~~~Ei~~l~~l~Hp--n  422 (705)
                      .+...||-|--+.||.|..+ .|.++|||.-+....                      -....-.+|.+.|.+|.-.  .
T Consensus        94 ~iG~~IGvGKEsdVY~~~~~-~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L~~~G~~  172 (304)
T COG0478          94 AIGTKIGVGKESDVYVAIDP-KGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLYPEGVK  172 (304)
T ss_pred             hhccccccCccceEEEEECC-CCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHhhhcCCC
Confidence            34678999999999999997 478899995432110                      0112346799999999655  6


Q ss_pred             cceeeeeeeeccCceEEEEeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEc
Q 005257          423 LVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLD  502 (705)
Q Consensus       423 iv~l~g~~~~~~~~~~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld  502 (705)
                      +.+.++|     +...+||||+++-.|...-        +.....-.++..|+.-+.-+-.   .|+||+|+.+-||+++
T Consensus       173 VP~P~~~-----nRHaVvMe~ieG~eL~~~r--------~~~en~~~il~~il~~~~~~~~---~GiVHGDlSefNIlV~  236 (304)
T COG0478         173 VPKPIAW-----NRHAVVMEYIEGVELYRLR--------LDVENPDEILDKILEEVRKAYR---RGIVHGDLSEFNILVT  236 (304)
T ss_pred             CCCcccc-----ccceeeeehcccceeeccc--------CcccCHHHHHHHHHHHHHHHHH---cCccccCCchheEEEe
Confidence            6666664     3457999999886664431        1233333344444444443334   8999999999999999


Q ss_pred             cCCCeeeeeeccceecCC
Q 005257          503 KEMNGRLGDFGLARMHGH  520 (705)
Q Consensus       503 ~~~~~kL~DFGla~~~~~  520 (705)
                      ++|.+.++||--+....+
T Consensus       237 ~dg~~~vIDwPQ~v~~~h  254 (304)
T COG0478         237 EDGDIVVIDWPQAVPISH  254 (304)
T ss_pred             cCCCEEEEeCcccccCCC
Confidence            999999999987754433

>PRK09902 hypothetical protein; Provisional

Probab=98.39  E-value=3.7e-06  Score=83.04  Aligned_cols=139  Identities=22%  Similarity=0.210  Sum_probs=104.0

Q ss_pred             EeecCceEEEEEEEcCCCeEEEEEEeccC-----C-chhHHHHHHHHHHhccCCCCC--cceeeeeeeecc----CceEE
Q 005257          372 IGVGGNGKVYKGVLEGGGAEIAVKRISHE-----N-DGGTRAFLAEISSLGRLKHKS--LVGLRGWCKREK----GSLML  439 (705)
Q Consensus       372 LG~G~fg~Vy~~~~~~~~~~vavK~i~~~-----~-~~~~~~~~~Ei~~l~~l~Hpn--iv~l~g~~~~~~----~~~~l  439 (705)
                      -|+||-+.|++..+.  |..+-+|+-...     . ..+...|.+|+..|.+|..-+  +.+.. ++...+    ...+|
T Consensus        26 ~~rgG~SgV~r~~~~--g~~~ylKrq~nhl~~s~r~P~g~ptf~rE~~~L~~L~~~GvPVP~pv-f~~~~k~~~~~rA~L  102 (216)
T PRK09902         26 YRRNGMSGVQCVERN--GKKLYVKRMTHHLFHSVRYPFGRPTIVREVAVIKELERAGVIVPKIV-FGEAVKIEGEWRALL  102 (216)
T ss_pred             cCCCCcceEEEEEeC--CcEEEEEeccCcccccccCCCCchHHHHHHHHHHHHHHcCCCCCccc-eeeeeccCCceEEEE
Confidence            467999999998775  446889976421     1 335678999999999996433  33333 332111    23689


Q ss_pred             EEeeCCC-CChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCC--eeeeeeccce
Q 005257          440 VYDYMEN-GSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMN--GRLGDFGLAR  516 (705)
Q Consensus       440 V~E~~~~-gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~--~kL~DFGla~  516 (705)
                      |+|-+++ -+|.+++.+.... +.+..++..++.+++..+.-||+   .++.|+|+-+.|||++.++.  ++++||.-++
T Consensus       103 VTe~L~g~~~L~~~l~~~~~~-~~~~~~k~~il~~va~~ia~LH~---~Gv~Hgdly~khIll~~~g~~~v~lIDlEk~r  178 (216)
T PRK09902        103 VTEDMAGFISIADWYAQHAVS-PYSDEVRQAMLKAVALAFKKMHS---VNRQHGCCYVRHIYVKTEGKAEAGFLDLEKSR  178 (216)
T ss_pred             EEEeCCCCccHHHHHhcCCcC-CcchHHHHHHHHHHHHHHHHHHH---CCCcCCCCCHhheeecCCCCeeEEEEEhhccc
Confidence            9997753 5888888553322 56788889999999999999998   99999999999999986667  8999998765


Q ss_pred             e
Q 005257          517 M  517 (705)
Q Consensus       517 ~  517 (705)
                      .
T Consensus       179 ~  179 (216)
T PRK09902        179 R  179 (216)
T ss_pred             h
Confidence            3

>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases

Probab=98.38  E-value=3.3e-06  Score=84.38  Aligned_cols=108  Identities=22%  Similarity=0.275  Sum_probs=83.9

Q ss_pred             HHHHHHHHHHhccCCCCC--cceeeeeeeecc---CceEEEEeeCCCC-ChhHHHHhcCCCCcccHHHHHHHHHHHHHHH
Q 005257          405 TRAFLAEISSLGRLKHKS--LVGLRGWCKREK---GSLMLVYDYMENG-SLDKWIFQCDGSMMLSCEERIRVLKDVAAGV  478 (705)
Q Consensus       405 ~~~~~~Ei~~l~~l~Hpn--iv~l~g~~~~~~---~~~~lV~E~~~~g-sL~~~L~~~~~~~~l~~~~~~~i~~qia~gL  478 (705)
                      .....+|...+.+|+...  ..+.+++.....   ...+||+|++++. +|.+++....   .++......++.+++..+
T Consensus        55 ~~ra~~E~~~~~~L~~~Gi~tP~pva~~~~r~~~~~~s~lite~l~~~~~L~~~~~~~~---~~~~~~~~~ll~~l~~~i  131 (206)
T PF06293_consen   55 RSRAKREWRNLQRLREAGIPTPEPVAYGERRKGGGYRSYLITEALPGAQDLRDLLQQWE---QLDPSQRRELLRALARLI  131 (206)
T ss_pred             chHHHHHHHHHHHHHHcCCCCCcEEEEEEEcCCCceeEEEEEEeCCCcccHHHHHHhhc---ccchhhHHHHHHHHHHHH
Confidence            345778888888886443  345555554322   2358999999874 7999886533   256677889999999999


Q ss_pred             HHHhcCCCCCeeecCCCCCCeEEccCC---Ceeeeeeccceec
Q 005257          479 LYLHEGWEKKVLHRDIKSSNVLLDKEM---NGRLGDFGLARMH  518 (705)
Q Consensus       479 ~yLH~~~~~~iiHrDLkp~NILld~~~---~~kL~DFGla~~~  518 (705)
                      .-||+   .+|+|+|+++.|||++.+.   .+.++||+-++..
T Consensus       132 ~~lH~---~gi~H~Dl~~~NILv~~~~~~~~~~lIDld~~~~~  171 (206)
T PF06293_consen  132 AKLHD---AGIYHGDLNPSNILVDPDDGQYRFYLIDLDRMRFR  171 (206)
T ss_pred             HHHHH---CcCCCCCCCcccEEEeCCCCceeEEEEcchhceeC
Confidence            99998   9999999999999999887   8999999988754

Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane

>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172

Probab=98.10  E-value=3.2e-05  Score=78.44  Aligned_cols=139  Identities=16%  Similarity=0.190  Sum_probs=81.9

Q ss_pred             eEEeecCceEEEEEEEcCCCeEEEEEEeccCCchhHHHHHHHHHHhccCCCCCc--ceeeeeeeeccCceEEEEeeCCCC
Q 005257          370 NVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSL--VGLRGWCKREKGSLMLVYDYMENG  447 (705)
Q Consensus       370 ~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~~~~~~~~~Ei~~l~~l~Hpni--v~l~g~~~~~~~~~~lV~E~~~~g  447 (705)
                      ..||+|..+.||+..    +..+++|......  ......+|.+++..+..-.+  .+.++++.. .+...+|||+++|.
T Consensus         7 ~~i~~G~t~~~y~~~----~~~~VlR~~~~~~--~~~~i~~E~~~l~~l~~~glpvP~~~~~~~~-~~~~glv~e~i~G~   79 (226)
T TIGR02172         7 TQTGEGGNGESYTHK----TGKWMLKLYNPGF--DKETIKREFDASRKVFSLGIPTPHPFDLVED-GGRLGLIYELIVGK   79 (226)
T ss_pred             eeecCCCCcceeEec----CCCEEEEeCCCCC--CHHHHHHHHHHHHHHHHcCCCCCceEEEEec-CCeeeeeeeecCCc
Confidence            568999999999842    3457788765432  33456889999999864444  455665543 55678899999886


Q ss_pred             C-hhHHH---------------------HhcCCCCcccHHHHH-HHHH----------HHHH-HHHHHhc-CCCCCeeec
Q 005257          448 S-LDKWI---------------------FQCDGSMMLSCEERI-RVLK----------DVAA-GVLYLHE-GWEKKVLHR  492 (705)
Q Consensus       448 s-L~~~L---------------------~~~~~~~~l~~~~~~-~i~~----------qia~-gL~yLH~-~~~~~iiHr  492 (705)
                      . +...+                     +..... ........ .+..          .+.. ...+|.. .....++|+
T Consensus        80 ~~~~~~~~~~~~~~~~l~~~la~~l~~lH~~~~~-~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~Hg  158 (226)
T TIGR02172        80 RSFSRIISDNPSRLEEIAKIFAEMAKKLHSTKCD-TSTFQSYKEKIRKFIEEKDFVPKDYKEKARAFIKEVPDTSTCLHG  158 (226)
T ss_pred             cchhhhhcCCHHHHHHHHHHHHHHHHHHhCCCCC-CCcHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHhCCCCCceEec
Confidence            3 21111                     111000 01111000 0000          0011 1122221 113567999


Q ss_pred             CCCCCCeEEccCCCeeeeeecccee
Q 005257          493 DIKSSNVLLDKEMNGRLGDFGLARM  517 (705)
Q Consensus       493 DLkp~NILld~~~~~kL~DFGla~~  517 (705)
                      |+.|.||++++++ +.|.||+.+..
T Consensus       159 D~~~~Nii~~~~~-~~iIDwe~a~~  182 (226)
T TIGR02172       159 DFQIGNLITSGKG-TYWIDLGDFGY  182 (226)
T ss_pred             CCCCCcEEEcCCC-cEEEechhcCc
Confidence            9999999999888 99999998753

This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.

>COG0661 AarF Predicted unusual protein kinase [General function prediction only]

Probab=98.05  E-value=1.8e-05  Score=88.94  Aligned_cols=143  Identities=17%  Similarity=0.152  Sum_probs=91.7

Q ss_pred             eEEeecCceEEEEEEEcCCCeEEEEEEeccCCchh------------------------------HH----------HHH
Q 005257          370 NVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGG------------------------------TR----------AFL  409 (705)
Q Consensus       370 ~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~~~------------------------------~~----------~~~  409 (705)
                      +.|+.++-|.||+|+++. |+.||||+.+..-...                              .+          ++.
T Consensus       131 ~PiAsASIaQVH~A~L~s-G~~VAVKVqrPgi~~~i~~DL~il~~~a~~~~~~~~~~~~l~~~~vv~e~~~~l~~ElDy~  209 (517)
T COG0661         131 EPIASASIAQVHRAVLKS-GEEVAVKVQRPGIRERIEADLKLLRRLARLIKRLPPGGRRLDLVEVVDEFEKRLREELDYR  209 (517)
T ss_pred             CchhhhhHhhheeEEecC-CCEEEEEecCCChHHHHHHHHHHHHHHHHHHHHcCCccccCChHHHHHHHHHHHHHHhCHH
Confidence            679999999999999985 8999999865421100                              01          133


Q ss_pred             HHHHHhccCC----CCCcceeeeeeeeccCceEEEEeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCC
Q 005257          410 AEISSLGRLK----HKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGW  485 (705)
Q Consensus       410 ~Ei~~l~~l~----Hpniv~l~g~~~~~~~~~~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~  485 (705)
                      +|..-+.+++    +..-+.+-.++.+-.+.-.|+|||++|-.+.+...-...  .++.+.+.....++.-  .-+-   
T Consensus       210 ~EA~n~~~~~~nf~~~~~v~VP~V~we~t~~~VLtmE~i~Gi~i~d~~~l~~~--g~d~k~ia~~~~~~f~--~q~~---  282 (517)
T COG0661         210 REAANAERFRENFKDDPDVYVPKVYWEYTTRRVLTMEWIDGIKISDIAALKSA--GIDRKELAELLVRAFL--RQLL---  282 (517)
T ss_pred             HHHHHHHHHHHHcCCCCCeEeceeehhccCCcEEEEEeeCCEecccHHHHHhc--CCCHHHHHHHHHHHHH--HHHH---
Confidence            4544444442    222333334444334556899999999999888532221  2443333322222211  1111   


Q ss_pred             CCCeeecCCCCCCeEEccCCCeeeeeeccceecCC
Q 005257          486 EKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGH  520 (705)
Q Consensus       486 ~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~~  520 (705)
                      ..+++|.|..|.||+++.++.+.+.|||+.....+
T Consensus       283 ~dgffHaDpHpGNi~v~~~g~i~~lDfGi~g~l~~  317 (517)
T COG0661         283 RDGFFHADPHPGNILVRSDGRIVLLDFGIVGRLDP  317 (517)
T ss_pred             hcCccccCCCccceEEecCCcEEEEcCcceecCCH
Confidence            26899999999999999999999999999876544

>PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily

Probab=97.92  E-value=9.8e-05  Score=74.43  Aligned_cols=145  Identities=16%  Similarity=0.169  Sum_probs=85.1

Q ss_pred             ceEEeecCceEEEEEEEcCCCeEEEEEEeccCCchhHHHHHHHHHHhccCCCCC--cceeeeeeeec--cCceEEEEeeC
Q 005257          369 ENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKS--LVGLRGWCKRE--KGSLMLVYDYM  444 (705)
Q Consensus       369 ~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~~~~~~~~~Ei~~l~~l~Hpn--iv~l~g~~~~~--~~~~~lV~E~~  444 (705)
                      .+.|+.|..+.||+....+  ..+++|.....  .....+.+|..++..+....  +.+++.++...  ....+++|+++
T Consensus         2 i~~l~~G~~n~~~~v~~~~--~~~vlK~~~~~--~~~~~~~~e~~~~~~l~~~~~pvP~~~~~~~~~~~~~~~~~~~~~i   77 (239)
T PF01636_consen    2 IRPLSGGFSNRVYRVTTDD--GRYVLKFYRPP--DAAERLRREAAVLRQLAEHGIPVPRVLAFDTSDEFNGFPYLLMEYI   77 (239)
T ss_dssp             EEEEEESSSSEEEEEEETT--SEEEEEEESSH--HHHHHHHHHHHHHHHHHHTTSBS--EEEEEEETEETSEEEEEEEEE
T ss_pred             CccCCCCCeeeEEEEEECC--cEEEEEEeCCC--CCHHHHHHHHHHHHHHHhcCCCCceEEeecccccccccceEEEEEe
Confidence            4679999999999999875  47999986543  45567788999988885433  44556544321  23468999999


Q ss_pred             CCCChhH----------------HHH---hcC-CCCcccHHH---------HHHH------------HHHHHH-HHHHHh
Q 005257          445 ENGSLDK----------------WIF---QCD-GSMMLSCEE---------RIRV------------LKDVAA-GVLYLH  482 (705)
Q Consensus       445 ~~gsL~~----------------~L~---~~~-~~~~l~~~~---------~~~i------------~~qia~-gL~yLH  482 (705)
                      ++..+..                .+.   ... ....+....         ....            ...+.. .+..++
T Consensus        78 ~g~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  157 (239)
T PF01636_consen   78 PGRPLDDELSPEQRPELLRQLGRALAQLHQVPPPFSPFADWPEWRLEFLRQLESWTARLRASELFDDLEELEERLLQELE  157 (239)
T ss_dssp             SSEEHHHTSTHHHHHHHHHHHHHHHHHHHHSHTTCCCHTHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
T ss_pred             ccccccccccccccccccccchhhhhhcccccccccccccccccccccccccccccccccchhhhhhhHHHHHHHHHHHH
Confidence            9988777                111   110 000111100         0000            111222 233333


Q ss_pred             c----CCCCCeeecCCCCCCeEEc-cCCCeeeeeecccee
Q 005257          483 E----GWEKKVLHRDIKSSNVLLD-KEMNGRLGDFGLARM  517 (705)
Q Consensus       483 ~----~~~~~iiHrDLkp~NILld-~~~~~kL~DFGla~~  517 (705)
                      +    .....++|+|+.|.|||++ +++.+-|.||+.+..
T Consensus       158 ~~~~~~~~~~~~HgD~~~~Nil~~~~~~~i~iID~e~a~~  197 (239)
T PF01636_consen  158 ALLPKPLPPVLIHGDLHPGNILVDPSDGRIGIIDFEDAGW  197 (239)
T ss_dssp             HHHHCCSCEEEE-SS-SGGGEEEESSTTEEEE--GTT-EE
T ss_pred             hhhccCCCcEEEEeccccccceeeeccceeEEEecccceE
Confidence            2    2357899999999999999 666667999998753

; InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B ....

>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]

Probab=97.90  E-value=1.9e-06  Score=95.51  Aligned_cols=183  Identities=17%  Similarity=0.118  Sum_probs=130.7

Q ss_pred             cceEEeecCceEEEEEEEcCCCeEEEEEEeccCCchhHHHHHHHHHHhccCCCCC-cceeeeeeeeccCceEEEEeeCCC
Q 005257          368 EENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKS-LVGLRGWCKREKGSLMLVYDYMEN  446 (705)
Q Consensus       368 ~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~~~~~~~~~Ei~~l~~l~Hpn-iv~l~g~~~~~~~~~~lV~E~~~~  446 (705)
                      ..+-+++|++++++|.+...+.. ...+.+...     ....-++++|.+++||| .+..++-+.. +...+++++++.+
T Consensus       246 ~fh~fvK~altknpKkRptaekl-L~h~fvs~~-----l~~rl~~eLLdK~n~P~~~v~~~~d~~~-E~~~~i~~~i~s~  318 (829)
T KOG0576|consen  246 FFHNFVKGALTKNPKKRPTAEKL-LQHPFVSQT-----LSRRLAIELLDKVNNPNPVVRYLEDYDG-EDYLWIPMRICST  318 (829)
T ss_pred             HHHHHHHHHhcCCCccCCChhhh-eeceeeccc-----hhhHHHHHHHHHccCCCCcccccccCCc-ccccchhhhhhcC
Confidence            34457899999999987754433 335555332     34456889999999999 6666665543 5678899999987


Q ss_pred             C-ChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecCCCCcce
Q 005257          447 G-SLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVAS  525 (705)
Q Consensus       447 g-sL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~~~~~~~  525 (705)
                      + +-..-.  ......+...+...+.+.-+++|++||+   ..-+|+|    ||+..+ ...|.+||+.+..+....  .
T Consensus       319 ~rs~~~~~--~~se~~~~~~~~~~~~r~et~~l~~l~~---~~~~~~d----~~l~s~-~~~~~~~~~v~~~L~~~~--~  386 (829)
T KOG0576|consen  319 GRSSALEM--TVSEIALEQYQFAYPLRKETRPLAELHS---SYKVHRD----NILGSE-EEVKLLDFAVPPQLTRTM--K  386 (829)
T ss_pred             CccccccC--ChhhHhhhhhhhhhhhhhhccccccccc---ccccCcc----cccccc-cccccccccCCcccCccc--c
Confidence            7 221111  1111134445556677778899999998   4458888    777765 678999999988766544  2


Q ss_pred             eeeeeccccCCCccccccCCCCccccEEEEehhHHHHhhCCCCC
Q 005257          526 TTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPI  569 (705)
Q Consensus       526 ~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~Pf  569 (705)
                      .....+|+.|+|||+.....+..+.|+|+.|+--.++.-|-.|-
T Consensus       387 ~~t~~~~~~~~~pev~~~~~~~~~p~~~~~~~~~~~~ap~~pPr  430 (829)
T KOG0576|consen  387 PRTAIGTPEPLAPEVIQENTIDGCPDSGSLAVSAIQMAPGLPPR  430 (829)
T ss_pred             cccCCCCCCCCCchhhcccccccCCCccCCCcchhhcCCCCCCC
Confidence            33467899999999999999999999999999777777776664

>PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY)

Probab=97.89  E-value=0.00019  Score=71.35  Aligned_cols=140  Identities=16%  Similarity=0.200  Sum_probs=91.5

Q ss_pred             HHhCCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCCchhHHH---------HHHHHHHhccCCCC---Ccceeee
Q 005257          361 AATKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRA---------FLAEISSLGRLKHK---SLVGLRG  428 (705)
Q Consensus       361 ~at~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~~~~~~---------~~~Ei~~l~~l~Hp---niv~l~g  428 (705)
                      ...++|...+++-......|.+-...  +..+++|..+.......+.         ..+++..+.+++..   ....++.
T Consensus        28 i~~~~~~~~kv~k~~~r~~ValIei~--~~kyIlK~pr~~~~r~er~~~sf~kg~~~~~l~~~~~~i~~~g~~~~~~~yl  105 (229)
T PF06176_consen   28 ILDNNYKIIKVFKNTKRNYVALIEID--GKKYILKEPREENRRPERRFKSFFKGSEYSRLINNTDKIRNEGFTEPADPYL  105 (229)
T ss_pred             HHhCCceEEEeecCCCccEEEEEEEC--CcEEEEeccchhhhhHHHHHHHHhccHHHHHHHHHHHHHHHcCcccccccee
Confidence            35567888888887777777666554  6889999876543322222         23444444444322   2222222


Q ss_pred             eeeec----cCceEEEEeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccC
Q 005257          429 WCKRE----KGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKE  504 (705)
Q Consensus       429 ~~~~~----~~~~~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~  504 (705)
                      ++...    ....+++|||++|..|.++.       .++.    .+...+++++.-||.   .|+.|+|..|.|++++.+
T Consensus       106 ~~ekk~~~~~~~~~ll~EYIeG~~l~d~~-------~i~e----~~~~ki~~~ikqlH~---~G~~HGD~hpgNFlv~~~  171 (229)
T PF06176_consen  106 AAEKKIFRYTSSYVLLMEYIEGVELNDIE-------DIDE----DLAEKIVEAIKQLHK---HGFYHGDPHPGNFLVSNN  171 (229)
T ss_pred             eeeeeeccceeEEEEEEEEecCeecccch-------hcCH----HHHHHHHHHHHHHHH---cCCccCCCCcCcEEEECC
Confidence            22211    12456899999998887654       1222    244567788999998   999999999999999865


Q ss_pred             CCeeeeeecccee
Q 005257          505 MNGRLGDFGLARM  517 (705)
Q Consensus       505 ~~~kL~DFGla~~  517 (705)
                       .+++.||+..+.
T Consensus       172 -~i~iID~~~k~~  183 (229)
T PF06176_consen  172 -GIRIIDTQGKRM  183 (229)
T ss_pred             -cEEEEECccccc
Confidence             499999987764

The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process

>COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning]

Probab=97.87  E-value=0.00022  Score=71.64  Aligned_cols=156  Identities=19%  Similarity=0.219  Sum_probs=100.4

Q ss_pred             ccCHHHHHHHhCCCCcceEEe---ecCceEEEEEEEcCCCeEEEEEEeccCCch-------------------hHHH---
Q 005257          353 RITYQEIEAATKGFSEENVIG---VGGNGKVYKGVLEGGGAEIAVKRISHENDG-------------------GTRA---  407 (705)
Q Consensus       353 ~~~~~el~~at~~f~~~~~LG---~G~fg~Vy~~~~~~~~~~vavK~i~~~~~~-------------------~~~~---  407 (705)
                      ..+.+.+....++..+....|   .|--+.||+|... ++..+|||+.......                   ..++   
T Consensus        34 ~~t~~~l~~L~~rg~i~~~~g~istGKEA~Vy~a~~~-~~~~~avKiyr~~t~~fk~~~~Yi~gd~Rf~~~~~~rr~lv~  112 (268)
T COG1718          34 KRTLETLRRLLSRGVITELVGCISTGKEANVYLAETG-DGRYVAVKIYRTSTSEFKRIRRYIQGDPRFRNSRSNRRKLVF  112 (268)
T ss_pred             hHHHHHHHHHhcCCceeeeEeeecCCcceEEEeeccC-CCceEEEEEEehhhhhhhhHHHHHhcChhhhcCCCCHHHHHH
Confidence            456667777777766666555   5666789998763 4788999988643211                   1111   


Q ss_pred             --HHHHHHHhccCCCC--CcceeeeeeeeccCceEEEEeeCCCCCh-hHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHh
Q 005257          408 --FLAEISSLGRLKHK--SLVGLRGWCKREKGSLMLVYDYMENGSL-DKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLH  482 (705)
Q Consensus       408 --~~~Ei~~l~~l~Hp--niv~l~g~~~~~~~~~~lV~E~~~~gsL-~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH  482 (705)
                        ..+|+.-|.++...  .+.+-+++.     .-.|||||+....+ .-.|..    ..+...+...+..++++.+.-|-
T Consensus       113 ~W~~kEf~NL~R~~eAGVrvP~Pi~~~-----~nVLvMEfIg~~g~pAP~LkD----v~~e~~e~~~~~~~~v~~~~~l~  183 (268)
T COG1718         113 AWARKEFRNLKRAYEAGVRVPEPIAFR-----NNVLVMEFIGDDGLPAPRLKD----VPLELEEAEGLYEDVVEYMRRLY  183 (268)
T ss_pred             HHHHHHHHHHHHHHHcCCCCCCceeec-----CCeEEEEeccCCCCCCCCccc----CCcCchhHHHHHHHHHHHHHHHH
Confidence              13566666666422  333334322     22699999965311 111111    12334466777778888887776


Q ss_pred             cCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecCCC
Q 005257          483 EGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHG  521 (705)
Q Consensus       483 ~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~~~  521 (705)
                      .  ..++||+||..=|||+. ++.+.|+|+|-|....++
T Consensus       184 ~--~a~LVHgDLSEyNiL~~-~~~p~iID~~QaV~~~hp  219 (268)
T COG1718         184 K--EAGLVHGDLSEYNILVH-DGEPYIIDVSQAVTIDHP  219 (268)
T ss_pred             H--hcCcccccchhhheEEE-CCeEEEEECccccccCCC
Confidence            5  48999999999999999 889999999998765543

>PF12260 PIP49_C: Protein-kinase domain of FAM69; InterPro: IPR022049 Family with sequence similarity 69 has three members (A, B and C)

Probab=97.80  E-value=6.3e-05  Score=73.90  Aligned_cols=103  Identities=19%  Similarity=0.151  Sum_probs=81.2

Q ss_pred             HHHHHhccCCC-CCcceeeeeeeeccCceEEEEeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCC
Q 005257          410 AEISSLGRLKH-KSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKK  488 (705)
Q Consensus       410 ~Ei~~l~~l~H-pniv~l~g~~~~~~~~~~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~  488 (705)
                      .|.-+++.+++ +++.+++|.|-.     ++|.||.+.+++...-.....-...+|..|.+|+.++++.+.+|++.....
T Consensus         8 ~E~lll~~l~~~~~~pk~lG~CG~-----~~v~E~~~~~~~~~~~~~l~~~~~~~w~~R~~iA~~lL~~l~~l~~~~~~~   82 (188)
T PF12260_consen    8 NEPLLLQLLQGSEPFPKLLGSCGR-----FYVVEYVGAGSLYGIYRPLSQFLQSPWEQRAKIALQLLELLEELDHGPLGF   82 (188)
T ss_pred             cHHHHHHHcCCCCCCCCeeeECCC-----EEEEEeecCccccccccccccccccCHHHHHHHHHHHHHHHHHHhcCCCCc
Confidence            47778888866 589999999943     578999987766421000000014689999999999999999999876666


Q ss_pred             eeecCCCCCCeEEccCCCeeeeeecccee
Q 005257          489 VLHRDIKSSNVLLDKEMNGRLGDFGLARM  517 (705)
Q Consensus       489 iiHrDLkp~NILld~~~~~kL~DFGla~~  517 (705)
                      +.-.|++++|+-+++++++|+.|...+-.
T Consensus        83 ~~lcDv~~~nfgv~~~~~lk~iDld~v~~  111 (188)
T PF12260_consen   83 FYLCDVSPDNFGVNDDGRLKLIDLDDVFV  111 (188)
T ss_pred             EEEeecchHHeEEeCCCcEEEEechhcch
Confidence            89999999999999999999999987654

Proteins in this uncharacterised family are described as transmembrane proteins.

>KOG1235 consensus Predicted unusual protein kinase [General function prediction only]

Probab=97.77  E-value=0.00014  Score=81.72  Aligned_cols=144  Identities=19%  Similarity=0.191  Sum_probs=92.0

Q ss_pred             ceEEeecCceEEEEEEEcCCCeEEEEEEeccCCch-------------------------------hHH------HHHHH
Q 005257          369 ENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDG-------------------------------GTR------AFLAE  411 (705)
Q Consensus       369 ~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~~-------------------------------~~~------~~~~E  411 (705)
                      .+.||.-+.|.||+|++++ |+.||||+-+..-..                               ..+      +|.+|
T Consensus       166 ~~piaaASlaQVhrA~L~~-G~~VaVKVQ~P~l~~~~~~Dl~~~~~~~~~l~k~~p~~~~~~lvdE~~~~L~~ELDF~~E  244 (538)
T KOG1235|consen  166 EEPIAAASLAQVHRARLKN-GEDVAVKVQHPGLEKLIMLDLRNLRLLAKVLQKFFPDFDLVWLVDEIAKSLPQELDFTKE  244 (538)
T ss_pred             cchhhhcchhheEEEEecC-CCEEEEEecCcChHHHHHHHHHHHHHHHHHHHHhCcCCchhhHHHHHHhhhHhhcchHHH
Confidence            4679999999999999987 899999975432100                               001      24445


Q ss_pred             HHHhccC----CCCC---cceeeeeeeeccCceEEEEeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcC
Q 005257          412 ISSLGRL----KHKS---LVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEG  484 (705)
Q Consensus       412 i~~l~~l----~Hpn---iv~l~g~~~~~~~~~~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~  484 (705)
                      .+-..+.    +|-+   -|.+-.++.+-.....|+||||+|..+.+.-.-.+.  .++...+..-+.+...-+-     
T Consensus       245 A~Nae~~~~~f~~~~~~~~V~VP~Vy~~~st~RVLtME~~~G~~i~Dl~~i~~~--gi~~~~i~~~l~~~~~~qI-----  317 (538)
T KOG1235|consen  245 AKNAERFRENFKDFSLLTYVLVPKVYWDLSTKRVLTMEYVDGIKINDLDAIDKR--GISPHDILNKLVEAYLEQI-----  317 (538)
T ss_pred             HHhHHHHHHHHHhcccccceeCCeehhhcCcceEEEEEecCCccCCCHHHHHHc--CCCHHHHHHHHHHHHHHHH-----
Confidence            4433333    3555   122333333333466899999999988776533222  3555554444444322222     


Q ss_pred             CCCCeeecCCCCCCeEEcc----CCCeeeeeeccceecCC
Q 005257          485 WEKKVLHRDIKSSNVLLDK----EMNGRLGDFGLARMHGH  520 (705)
Q Consensus       485 ~~~~iiHrDLkp~NILld~----~~~~kL~DFGla~~~~~  520 (705)
                      ...|++|+|-.|.||+++.    ++.+.+-|||+.....+
T Consensus       318 f~~GffHaDPHPGNilv~~~~~~~~~ivllDhGl~~~is~  357 (538)
T KOG1235|consen  318 FKTGFFHADPHPGNILVRPNPEGDEEIVLLDHGLYAVISH  357 (538)
T ss_pred             HhcCCccCCCCCCcEEEecCCCCCccEEEEcccccccccH
Confidence            2368999999999999983    67899999999876554

>PLN02876 acyl-CoA dehydrogenase

Probab=97.71  E-value=0.00036  Score=84.23  Aligned_cols=81  Identities=16%  Similarity=0.288  Sum_probs=57.6

Q ss_pred             ceEEeecCceEEEEEEEcCCC--eEEEEEEeccCC-chhHHHHHHHHHHhccCC-CCCc--ceeeeeeeecc--CceEEE
Q 005257          369 ENVIGVGGNGKVYKGVLEGGG--AEIAVKRISHEN-DGGTRAFLAEISSLGRLK-HKSL--VGLRGWCKREK--GSLMLV  440 (705)
Q Consensus       369 ~~~LG~G~fg~Vy~~~~~~~~--~~vavK~i~~~~-~~~~~~~~~Ei~~l~~l~-Hpni--v~l~g~~~~~~--~~~~lV  440 (705)
                      .+.++.|.+..+|+.....++  ..+++|+..... ......+.+|.++|+.+. |+++  .+++.+|.+..  +..++|
T Consensus        43 v~~l~gG~sn~ty~l~~~~~~~~~~~VLR~~p~~~~~~~~~~~~rE~~~l~~L~~~~~vpVP~v~~~~~d~~v~G~~flV  122 (822)
T PLN02876         43 VSQFGHGQSNPTFLLEVGNGGSVKRYVLRKKPPGKLLQSAHAVEREYQVLRALGEHTDVPVPKVYCLCTDASVIGTAFYI  122 (822)
T ss_pred             EEEeCCCCcCceEEEEECCCCcceeEEEEeCCCCccCccHHHHHHHHHHHHHHhhcCCCCCCcEEEEecCCCcCCCceEE
Confidence            567899999999998775433  467888764432 123457889999999995 6665  67777775421  467899


Q ss_pred             EeeCCCCCh
Q 005257          441 YDYMENGSL  449 (705)
Q Consensus       441 ~E~~~~gsL  449 (705)
                      |||+++..+
T Consensus       123 ME~v~G~~~  131 (822)
T PLN02876        123 MEYLEGRIF  131 (822)
T ss_pred             EEecCCccc
Confidence            999987643

>cd05150 APH Aminoglycoside 3'-phosphotransferase (APH)

Probab=97.63  E-value=0.00041  Score=71.12  Aligned_cols=139  Identities=14%  Similarity=0.082  Sum_probs=81.7

Q ss_pred             EeecCc-eEEEEEEEcCCCeEEEEEEeccCCchhHHHHHHHHHHhccCC-CCCcceeeeeeeeccCceEEEEeeCCCCCh
Q 005257          372 IGVGGN-GKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLK-HKSLVGLRGWCKREKGSLMLVYDYMENGSL  449 (705)
Q Consensus       372 LG~G~f-g~Vy~~~~~~~~~~vavK~i~~~~~~~~~~~~~Ei~~l~~l~-Hpniv~l~g~~~~~~~~~~lV~E~~~~gsL  449 (705)
                      |-.|.. ..||+....  +..+.||+.....   ..+..+|++++..+. +--+.+++++... .+..++|||+++|.+|
T Consensus         6 ~~~g~~~~~v~~~~~~--~~~~~vk~~~~~~---~~~~~~E~~~l~~l~~~~~vP~v~~~~~~-~~~~~lv~e~i~G~~l   79 (244)
T cd05150           6 VTEGQSGATVYRLDGK--NPGLYLKIAPSGP---TYELEREAERLRWLAGKLPVPEVIDYGSD-DGRAWLLTSAVPGVPA   79 (244)
T ss_pred             cCCCCCcCeEEEEcCC--CCcEEEEecCCCc---ccchHHHHHHHHHHHhcCCCCeEEEEEec-CCccEEEEEeeCCccH
Confidence            444555 789999764  3578888765432   345678888888884 3334456665544 3567899999999877


Q ss_pred             hHHH-------------------HhcCC-CCccc--HHHHHHHHH--------------------HHHHHHHHHhc----
Q 005257          450 DKWI-------------------FQCDG-SMMLS--CEERIRVLK--------------------DVAAGVLYLHE----  483 (705)
Q Consensus       450 ~~~L-------------------~~~~~-~~~l~--~~~~~~i~~--------------------qia~gL~yLH~----  483 (705)
                      ....                   +.... ...+.  .........                    .+...+..|-.    
T Consensus        80 ~~~~~~~~~~~~~~~l~~~l~~lH~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~  159 (244)
T cd05150          80 AALWEELEPERLVDALAEALRRLHALPVADCPFDRRLDRRLAEARARVENGLVDEDDFDDERRGWSAEELYAELEATRPA  159 (244)
T ss_pred             hHhhcccCHHHHHHHHHHHHHHHhcCCcccCCcchhHHHHHHHHHHHHhcCCcChhhCcHhhcCCCHHHHHHHHHhhCCC
Confidence            6432                   11100 00111  000000000                    01111222211    


Q ss_pred             CCCCCeeecCCCCCCeEEccCCCeeeeeeccce
Q 005257          484 GWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLAR  516 (705)
Q Consensus       484 ~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~  516 (705)
                      .....++|+|+.|.|||++++....|.||+.+.
T Consensus       160 ~~~~~l~HgD~~~~Nil~~~~~~~~iIDwe~a~  192 (244)
T cd05150         160 EEDLVVTHGDACLPNIIVDPGKFSGFIDLGRLG  192 (244)
T ss_pred             cCceEEECCCCCCccEEEeCCcEEEEEEccccc
Confidence            123569999999999999987778899999875

The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio

>PRK10593 hypothetical protein; Provisional

Probab=97.32  E-value=0.0033  Score=66.56  Aligned_cols=79  Identities=14%  Similarity=0.043  Sum_probs=55.9

Q ss_pred             CcceEEeecCceEEEEEEEcCCCeEEEEEEeccCCchhHHHHHHHHHHhccCCC---CCcceeeeeeeec--cCceEEEE
Q 005257          367 SEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLKH---KSLVGLRGWCKRE--KGSLMLVY  441 (705)
Q Consensus       367 ~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~~~~~~~~~Ei~~l~~l~H---pniv~l~g~~~~~--~~~~~lV~  441 (705)
                      ...+.||.|..+.||+....+ + .+.+|..+.  ......+.+|...|+.|.-   -.+.+++++|..+  .+..+|||
T Consensus        17 ~~~~~i~~G~~~~vy~~~~~~-~-~~~~k~~~~--~~~~~~~~~Ea~~L~~L~~~~~vpVP~V~~~~~~~~~~g~~~LVm   92 (297)
T PRK10593         17 SRVECISEQPYAALWALYDSQ-G-NPMPLMARS--FSTPGVAQQEAWKLSMLARSGTVRMPTVYGVMTHEQSPGPDVLLL   92 (297)
T ss_pred             heeeecCCccceeEEEEEcCC-C-CEEEEEecc--cccchHHHHHHHHHHHHccCCCCCcCcEEEEeccCCcCCCeEEEE
Confidence            345679999999999987643 3 466776432  1123578899999988853   3567788877532  35689999


Q ss_pred             eeCCCCCh
Q 005257          442 DYMENGSL  449 (705)
Q Consensus       442 E~~~~gsL  449 (705)
                      |+++++++
T Consensus        93 E~i~G~~~  100 (297)
T PRK10593         93 ERLRGVSV  100 (297)
T ss_pred             eccCCEec
Confidence            99998765

>PF10707 YrbL-PhoP_reg: PhoP regulatory network protein YrbL; InterPro: IPR019647 This entry represents proteins that are activated by the protein PhoP

Probab=97.31  E-value=0.002  Score=63.77  Aligned_cols=133  Identities=20%  Similarity=0.308  Sum_probs=89.2

Q ss_pred             CcceEEeecCceEEEEEEEcCCCeEEEEEEeccCC----------------chhHHHHHHHHHHhccCC------CCCcc
Q 005257          367 SEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHEN----------------DGGTRAFLAEISSLGRLK------HKSLV  424 (705)
Q Consensus       367 ~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~----------------~~~~~~~~~Ei~~l~~l~------Hpniv  424 (705)
                      +....||+|+.-.||.--.   +....||+.....                ....+++.+|+.-...+.      +.+|.
T Consensus         4 ~~~~~i~~G~~R~cy~HP~---dp~~cIKV~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~E~~~y~~l~~~~~~~~~~i~   80 (199)
T PF10707_consen    4 SESDLIAQGGERDCYQHPD---DPNLCIKVMRPDRGERRRPFKRWLKRLRPKSRYRQNRRELRYYKQLSLRRGVDWSHIP   80 (199)
T ss_pred             CCCcccccCCCceEEECCC---CCCeEEEEEccccccccccchhHHHhhcccchhHHHHHHHHHHHHHhhccCCcccccc
Confidence            3456799999999986533   3447888876654                223466777776666665      78899


Q ss_pred             eeeeeeeeccCceEEEEeeCCC------CChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCC
Q 005257          425 GLRGWCKREKGSLMLVYDYMEN------GSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSN  498 (705)
Q Consensus       425 ~l~g~~~~~~~~~~lV~E~~~~------gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~N  498 (705)
                      +++|+... +.-+.+|+|.+.+      -+|.+++.+.    .++. +..+.+.+   -..||-+   ..|+.+|++|+|
T Consensus        81 r~~G~veT-~~G~Glv~e~I~d~dG~~s~TL~~~l~~~----~~~~-~~~~~L~~---f~~~l~~---~~Iv~~dl~~~N  148 (199)
T PF10707_consen   81 RFYGFVET-NLGLGLVVELIRDADGNISPTLEDYLKEG----GLTE-ELRQALDE---FKRYLLD---HHIVIRDLNPHN  148 (199)
T ss_pred             cEeEEEec-CCceEEEEEEEECCCCCcCccHHHHHHcC----CccH-HHHHHHHH---HHHHHHH---cCCeecCCCccc
Confidence            99999887 4456888888743      2577777432    3444 44444443   3445655   889999999999


Q ss_pred             eEEccCC----Ceeeee-ecc
Q 005257          499 VLLDKEM----NGRLGD-FGL  514 (705)
Q Consensus       499 ILld~~~----~~kL~D-FGl  514 (705)
                      |++..+.    .+.|+| ||-
T Consensus       149 Iv~~~~~~~~~~lvlIDG~G~  169 (199)
T PF10707_consen  149 IVVQRRDSGEFRLVLIDGLGE  169 (199)
T ss_pred             EEEEecCCCceEEEEEeCCCC
Confidence            9996432    466666 443

PhoP controls the expression of a large number of genes that mediate adaptation to low Mg2+ environments and/or virulence in several bacterial species. YbrL is proposed to be acting in a loop activity with PhoP and PrmA analogous to the multi-component loop in Salmonella sp., where the PhoP-dependent PmrD protein activates the regulatory protein PmrA, and the activated PmrA then represses transcription from the PmrD promoter which harbours binding sites for both the PhoP and PmrA proteins. Expression of YrbL is induced in low Mg2+ in a PhoP-dependent fashion and repressed by Fe3+ in a PmrA-dependent manner [].

>cd05155 APH_ChoK_like_1 Uncharacterized bacterial proteins with similarity to Aminoglycoside 3'-phosphotransferase (APH) and Choline kinase (ChoK) family members

Probab=97.28  E-value=0.0016  Score=66.49  Aligned_cols=74  Identities=18%  Similarity=0.178  Sum_probs=44.4

Q ss_pred             eEEeecCce-EEEEEEEcCCCeEEEEEEeccCCchhHHHHHHHHHHhccCCCC---Ccceeeeeeeecc--CceEEEEee
Q 005257          370 NVIGVGGNG-KVYKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHK---SLVGLRGWCKREK--GSLMLVYDY  443 (705)
Q Consensus       370 ~~LG~G~fg-~Vy~~~~~~~~~~vavK~i~~~~~~~~~~~~~Ei~~l~~l~Hp---niv~l~g~~~~~~--~~~~lV~E~  443 (705)
                      +.|+.||.. .||+..     ..+++|..+.  ......+.+|.+++..|...   .+.+.++.+...+  ...+++|++
T Consensus         3 ~~~~~gG~~n~vy~~~-----~~~VlR~~~~--~~~~~~~~~E~~~l~~L~~~~~v~vP~~~~~~~~~~~~~~~~~l~~~   75 (235)
T cd05155           3 EPVDSGGTDNATFRLG-----DDMSVRLPSA--AGYAGQVRKEQRWLPRLAPHLPLPVPEPLGKGEPGEGYPWPWSVYRW   75 (235)
T ss_pred             eeccCCCcccceEEcC-----CceEEEcCCc--cchHHHHHHHHHHHHHHhccCCCCCCceeecCCCccCCCcceEEEEe
Confidence            457777776 588751     2467776433  22345788899999887532   2333343332211  234789999


Q ss_pred             CCCCChh
Q 005257          444 MENGSLD  450 (705)
Q Consensus       444 ~~~gsL~  450 (705)
                      ++|.++.
T Consensus        76 i~G~~l~   82 (235)
T cd05155          76 LEGETAT   82 (235)
T ss_pred             ecCCCCC
Confidence            9987764

The APH/ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates, such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides, and macrolides leads to their inactivation and to bacterial antibiotic resista

>PF13095 FTA2: Kinetochore Sim4 complex subunit FTA2

Probab=97.27  E-value=0.0023  Score=62.97  Aligned_cols=126  Identities=24%  Similarity=0.364  Sum_probs=90.3

Q ss_pred             CCCCcceEEeecCc-eEEEEEEEcCCCeEEEEEEeccC---C--------c----------hhHHHHHHHHHHhccCC--
Q 005257          364 KGFSEENVIGVGGN-GKVYKGVLEGGGAEIAVKRISHE---N--------D----------GGTRAFLAEISSLGRLK--  419 (705)
Q Consensus       364 ~~f~~~~~LG~G~f-g~Vy~~~~~~~~~~vavK~i~~~---~--------~----------~~~~~~~~Ei~~l~~l~--  419 (705)
                      ..++..+.||.|.- |.|||+...  |..+|+|.+..-   .        .          .....|..|.+...+|+  
T Consensus        37 ~~I~flefLg~g~~~~~V~kv~I~--g~~YALKlf~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~PF~~ECRAfgRLke~  114 (207)
T PF13095_consen   37 DDIEFLEFLGHGSHDGYVFKVEID--GRIYALKLFRFWDYTEPDYTRERFAGHETSLSTPAHYADPFNCECRAFGRLKEA  114 (207)
T ss_pred             CcEeeeeecCCCCceeEEEEEEEC--CeEEEEEEeeccccCCCccccccccccccccchhhhhcChHHHHHHhhHHHHhc
Confidence            56777899999999 999999996  679999983221   0        0          11235888999888885  


Q ss_pred             -CCCc--ceeeeeeeecc-----------------CceEEEEeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHH
Q 005257          420 -HKSL--VGLRGWCKREK-----------------GSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVL  479 (705)
Q Consensus       420 -Hpni--v~l~g~~~~~~-----------------~~~~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~  479 (705)
                       +.++  ++++||..-..                 ....||.||.+...            .+...+    +.+|.+-|.
T Consensus       115 ~~e~~~Avkc~Gyl~L~~~~q~~~~~~~~~~~~~~~~~aIVKD~v~~~~------------~~~~~~----~~~~~~dl~  178 (207)
T PF13095_consen  115 GREGLWAVKCHGYLLLTEDQQFEQLRQRGSDHRPLPIRAIVKDFVPDDP------------PLQIRD----IPQMLRDLK  178 (207)
T ss_pred             cccCceEEEeeEEEEEchHHHHHHhhcccccCCCCccEEEEEeecCCcc------------ccchhH----HHHHHHHHH
Confidence             4456  89999884321                 12467888876532            123333    445666677


Q ss_pred             HHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccc
Q 005257          480 YLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLA  515 (705)
Q Consensus       480 yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla  515 (705)
                      .+|.   .+|+-+|+++.|..     .-||+|||.+
T Consensus       179 ~~~k---~gI~~~Dv~~~ny~-----~G~lvDfs~~  206 (207)
T PF13095_consen  179 ILHK---LGIVPRDVKPRNYR-----GGKLVDFSSS  206 (207)
T ss_pred             HHHH---CCeeeccCcccccc-----CCEEEecccC
Confidence            8998   99999999999986     3589999864

>COG2112 Predicted Ser/Thr protein kinase [Signal transduction mechanisms]

Probab=97.24  E-value=0.0015  Score=62.36  Aligned_cols=128  Identities=20%  Similarity=0.221  Sum_probs=86.7

Q ss_pred             cceEEeecCceEEEEEEEcCCCeEEEEEEeccCCchhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEEEEeeCCCC
Q 005257          368 EENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENG  447 (705)
Q Consensus       368 ~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~lV~E~~~~g  447 (705)
                      ..+.|++|++|.||+|.+.  |..+|+|+-+.+  .....+..|.++|..+.-.++.+-+-.+.    .-.+.|||+.|-
T Consensus        26 v~~~L~KG~~s~Vyl~~~~--~~~~a~Kvrr~d--s~r~~l~kEakiLeil~g~~~~p~vy~yg----~~~i~me~i~G~   97 (201)
T COG2112          26 VEKELAKGTTSVVYLGEWR--GGEVALKVRRRD--SPRRNLEKEAKILEILAGEGVTPEVYFYG----EDFIRMEYIDGR   97 (201)
T ss_pred             hhhhhhcccccEEEEeecc--CceEEEEEecCC--cchhhHHHHHHHHHHhhhcCCCceEEEec----hhhhhhhhhcCc
Confidence            4567999999999999997  568999976543  34577889999999998877765333222    224569999988


Q ss_pred             ChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC--CCeEEccCCCeeeeeecccee
Q 005257          448 SLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKS--SNVLLDKEMNGRLGDFGLARM  517 (705)
Q Consensus       448 sL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp--~NILld~~~~~kL~DFGla~~  517 (705)
                      .|.+.-..      .+...+    ..+++.---|..   .+|-|..|.-  .||++.+ ..+.|+||.-|..
T Consensus        98 ~L~~~~~~------~~rk~l----~~vlE~a~~LD~---~GI~H~El~~~~k~vlv~~-~~~~iIDFd~At~  155 (201)
T COG2112          98 PLGKLEIG------GDRKHL----LRVLEKAYKLDR---LGIEHGELSRPWKNVLVND-RDVYIIDFDSATF  155 (201)
T ss_pred             chhhhhhc------ccHHHH----HHHHHHHHHHHH---hccchhhhcCCceeEEecC-CcEEEEEccchhh
Confidence            88765431      122222    333444333443   7788888763  4555554 4899999998873

>TIGR02721 ycfN_thiK thiamine kinase

Probab=97.18  E-value=0.0015  Score=67.54  Aligned_cols=138  Identities=14%  Similarity=0.024  Sum_probs=77.6

Q ss_pred             EeecCceEEEEEEEcCCCeEEEEEEeccCCchhHHHHHHHHHHhccCCCCCcce-eeeeeeeccCceEEEEeeCCCCChh
Q 005257          372 IGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVG-LRGWCKREKGSLMLVYDYMENGSLD  450 (705)
Q Consensus       372 LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~~~~~~~~~Ei~~l~~l~Hpniv~-l~g~~~~~~~~~~lV~E~~~~gsL~  450 (705)
                      +..|-...+|+...  ++..+++|..........-...+|.++++.+....+.+ ++..+   .  -++||||++|..+.
T Consensus         4 ~~~G~tn~~y~~~~--~~~~~vlR~~~~~~~~~~~~r~~E~~~l~~l~~~g~~P~~i~~~---~--~~~v~e~i~G~~~~   76 (256)
T TIGR02721         4 LSGGLTNRSWRIEH--PGISFVWRPQSPVCKALGVDRQREYQILQALSALGLAPKPILVN---E--HWLLVEWLEGEVIT   76 (256)
T ss_pred             CCCcCcCCeEEEEe--CCccEEEeeCCcccccccCcHHHHHHHHHHHHhcCCCCceEEEe---C--CEEEEEeccCcccc
Confidence            45677789998874  46678888754332221113567888888886544433 33322   1  26899999987654


Q ss_pred             HH-----------------HHhcCC-CCcccHHHH-HHHHHH---------HHHHHHHHhc-----CCCCCeeecCCCCC
Q 005257          451 KW-----------------IFQCDG-SMMLSCEER-IRVLKD---------VAAGVLYLHE-----GWEKKVLHRDIKSS  497 (705)
Q Consensus       451 ~~-----------------L~~~~~-~~~l~~~~~-~~i~~q---------ia~gL~yLH~-----~~~~~iiHrDLkp~  497 (705)
                      ..                 |+.... ...+..... .....+         +...+..+-.     .....++|+|+.|.
T Consensus        77 ~~~~~~~~~~~~la~~l~~lH~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~H~Dl~~~  156 (256)
T TIGR02721        77 LDQFVALDLLLELAALLHQLHSQPRFGYPLSLKARIAHYWLQIDPARRTPEWLRLYKQFRSAPEPAPLPLAPLHMDVHAY  156 (256)
T ss_pred             cccccCchhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHHhcccccCChHHHHHHHHHHhccCCCCCCCeeecCCCCcC
Confidence            21                 111111 111222211 111111         1111221211     11356999999999


Q ss_pred             CeEEccCCCeeeeeecccee
Q 005257          498 NVLLDKEMNGRLGDFGLARM  517 (705)
Q Consensus       498 NILld~~~~~kL~DFGla~~  517 (705)
                      ||++++++ +.|.||..+..
T Consensus       157 Nil~~~~~-~~lIDwE~a~~  175 (256)
T TIGR02721       157 NLVVTPQG-LKLIDWEYASD  175 (256)
T ss_pred             cEEEeCCC-CEEEeccccCc
Confidence            99999876 78999998753

Members of this family are the ycfN gene product of Escherichia coli, now identified as the salvage enzyme thiamine kinase (thiK), and additional proteobacterial homologs taken to be orthologs with equivalent function.

>cd05157 ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes

Probab=97.16  E-value=0.0027  Score=64.51  Aligned_cols=142  Identities=13%  Similarity=0.101  Sum_probs=80.6

Q ss_pred             ceEEeecCceEEEEEEEcC-CCeEEEEEEeccCCchhHHHHHHHHHHhccCCCCCcce-eeeeeeeccCceEEEEeeCCC
Q 005257          369 ENVIGVGGNGKVYKGVLEG-GGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVG-LRGWCKREKGSLMLVYDYMEN  446 (705)
Q Consensus       369 ~~~LG~G~fg~Vy~~~~~~-~~~~vavK~i~~~~~~~~~~~~~Ei~~l~~l~Hpniv~-l~g~~~~~~~~~~lV~E~~~~  446 (705)
                      .+.|..|-...+|+....+ .+..+++|+....... .-+..+|+.++..+...++++ +++.+ . .   .++|||++|
T Consensus         3 i~~l~gG~tN~~~~v~~~~~~~~~~vlR~~~~~~~~-~~d~~~E~~~~~~l~~~gl~P~v~~~~-~-~---~~l~e~i~G   76 (235)
T cd05157           3 FKRFTGGITNKLVKVSNKEDNQDAVLVRVYGNKTEL-IIDRERELRIHKLLSKHGLAPKLYATF-Q-N---GLIYEFIPG   76 (235)
T ss_pred             EEEcCCcccceEEEEEcCCCCCCeEEEEEccCCccc-eecHHHHHHHHHHHHhCCCCCeEEEEe-C-C---cEEEEeeCC
Confidence            3567778888999997653 2467888976533221 122347888888886544443 33322 1 2   379999998


Q ss_pred             CChhHH--------------H---HhcCCCC--------cc-cHHHHHHHHH----------------------HHH---
Q 005257          447 GSLDKW--------------I---FQCDGSM--------ML-SCEERIRVLK----------------------DVA---  475 (705)
Q Consensus       447 gsL~~~--------------L---~~~~~~~--------~l-~~~~~~~i~~----------------------qia---  475 (705)
                      .++...              |   +......        .. .+..+..+..                      .+.   
T Consensus        77 ~~l~~~~~~~~~~~~~la~~l~~lH~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  156 (235)
T cd05157          77 RTLEPEDLRNPKIYRLIARELAKLHSIKPPEAISSPGTPKPILWPTIRKWINLVPTEFKKPEKFQKKTKAISFEQLRDEI  156 (235)
T ss_pred             CcCCHHHccChHHHHHHHHHHHHHhcccccccccccCCCCCcHHHHHHHHHHHhHHhhccccchhhhhccccHHHHHHHH
Confidence            765321              1   1111100        11 1122112111                      111   


Q ss_pred             HHHH-HHhc-CCCCCeeecCCCCCCeEEcc-CCCeeeeeeccce
Q 005257          476 AGVL-YLHE-GWEKKVLHRDIKSSNVLLDK-EMNGRLGDFGLAR  516 (705)
Q Consensus       476 ~gL~-yLH~-~~~~~iiHrDLkp~NILld~-~~~~kL~DFGla~  516 (705)
                      ..|. .+.. .....++|+|+.+.|||+++ ++.+.|.||..|.
T Consensus       157 ~~l~~~l~~~~~~~~l~H~Dl~~~Nil~~~~~~~~~lIDwe~a~  200 (235)
T cd05157         157 SWLKELLSALNSPIVFCHNDLLSGNIIYNEEKNSVKFIDYEYAG  200 (235)
T ss_pred             HHHHHHhcccCCCEEEEcCCCCcCcEEEeCCCCCEEEEEcccCC
Confidence            1111 1111 12357999999999999998 5789999998875

ETNK is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major phospholipid, phosphatidylethanolamine (PtdEtn). Unlike ChoK, ETNK shows specific activity for its substrate, and displays negligible activity towards N-methylated derivatives of Etn. The Drosophila ETNK is implicated in development and neuronal function. Mammals contain two ETNK proteins, ETNK1 and ETNK2. ETNK1 selectively increases Etn uptake and phosphorylation, as well as PtdEtn synthesis. ETNK2 is found primarily in the liver and reproductive tissues. It plays a critical role in regulating placental hemostasis to support late embryo

>PRK09550 mtnK methylthioribose kinase; Reviewed

Probab=96.91  E-value=0.01  Score=65.00  Aligned_cols=77  Identities=14%  Similarity=0.076  Sum_probs=52.5

Q ss_pred             ceEEeecCceEEEEEEEcCCCeEEEEEEeccC------C-chhHHHHHHHHHHhccCC---CCCcceeeeeeeeccCceE
Q 005257          369 ENVIGVGGNGKVYKGVLEGGGAEIAVKRISHE------N-DGGTRAFLAEISSLGRLK---HKSLVGLRGWCKREKGSLM  438 (705)
Q Consensus       369 ~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~------~-~~~~~~~~~Ei~~l~~l~---Hpniv~l~g~~~~~~~~~~  438 (705)
                      .+.||.|.+..||++...++++.++||.-...      . ....+.+..|.+.|..+.   -.++.+++.+.   ....+
T Consensus        31 ~~elggGn~N~VyrV~~~~g~~svIVKqa~p~~r~~g~~wpl~~eR~~~Eae~L~~l~~~~p~~VPkV~~~D---~~~~~  107 (401)
T PRK09550         31 AREIGDGNLNLVFRVSDTEGGKSVIVKQALPYVRVVGESWPLTLDRARIEAEALKIQAKYVPDLVPKVYHYD---EELAV  107 (401)
T ss_pred             eeEcCCCceEEEEEEEeCCCCeEEEEEecCcccccccccccccHHHHHHHHHHHHHHHhhCCCCCCeEEEEC---CCCCE
Confidence            45799999999999999754468999974311      0 123456677888887763   23455666642   34568


Q ss_pred             EEEeeCCCCC
Q 005257          439 LVYDYMENGS  448 (705)
Q Consensus       439 lV~E~~~~gs  448 (705)
                      +||||+++..
T Consensus       108 lVME~L~~~~  117 (401)
T PRK09550        108 TVMEDLSDHK  117 (401)
T ss_pred             EEEecCCCcc
Confidence            9999998643

>cd05156 ChoK_euk Choline Kinase (ChoK) in eukaryotes

Probab=96.72  E-value=0.0089  Score=63.32  Aligned_cols=142  Identities=20%  Similarity=0.175  Sum_probs=83.0

Q ss_pred             eEEeecCceEEEEEEEcC------CCeEEEEEEeccCCchhHHHHHHHHHHhccCCCCCcc-eeeeeeeeccCceEEEEe
Q 005257          370 NVIGVGGNGKVYKGVLEG------GGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLV-GLRGWCKREKGSLMLVYD  442 (705)
Q Consensus       370 ~~LG~G~fg~Vy~~~~~~------~~~~vavK~i~~~~~~~~~~~~~Ei~~l~~l~Hpniv-~l~g~~~~~~~~~~lV~E  442 (705)
                      +.|..|-...+|+.....      .++.+++|+..... .......+|.+++..+....+. ++++.+ . +   .+|+|
T Consensus         4 ~~l~gGltN~~y~v~~~~~~~~~~~~~~~vlRi~~~~~-~~~~~r~~E~~~~~~l~~~g~~P~~~~~~-~-~---~~v~e   77 (302)
T cd05156           4 SKISGGLTNAVYKVSLPDEDALSDEPRKVLLRVYGQSV-ELLIDRERELVVFARLSERNLGPKLYGIF-P-N---GRIEE   77 (302)
T ss_pred             EEecCcccceeEEEEcCCcccccCCCCeEEEEEecCCC-cceechHHHHHHHHHHHhCCCCCceEEEe-C-C---Cchhh
Confidence            456667777999988653      25778899865432 2233456788888888544444 344433 2 2   35899


Q ss_pred             eCCCCChhHH-----------------HHhcCCCC------cc--cHHHHHH--------------------------HH
Q 005257          443 YMENGSLDKW-----------------IFQCDGSM------ML--SCEERIR--------------------------VL  471 (705)
Q Consensus       443 ~~~~gsL~~~-----------------L~~~~~~~------~l--~~~~~~~--------------------------i~  471 (705)
                      |++|..+...                 +++.....      ..  -+..+..                          +.
T Consensus        78 ~i~G~~l~~~~~~~~~~~~~ia~~L~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  157 (302)
T cd05156          78 FIPSRTLTTEELRDPDISAEIARRMAKLHSIVVPLSPEERDLTPAIWKLLKQWLDLAETVIEIVDSDSEKLLEVELSLFL  157 (302)
T ss_pred             eeCCCcCCHhHcCCcHHHHHHHHHHHHhhCCCCCCCCCcCcccchHHHHHHHHHHHhhhhhhhcccchhhhhhhhHHHHH
Confidence            9988766431                 11111100      00  0111111                          11


Q ss_pred             HHHHHHHHHHhc------CCCCCeeecCCCCCCeEEccC----CCeeeeeecccee
Q 005257          472 KDVAAGVLYLHE------GWEKKVLHRDIKSSNVLLDKE----MNGRLGDFGLARM  517 (705)
Q Consensus       472 ~qia~gL~yLH~------~~~~~iiHrDLkp~NILld~~----~~~kL~DFGla~~  517 (705)
                      ..+..-+..|..      .....++|+|+.+.|||++++    +.++++||..|..
T Consensus       158 ~~~~~~~~~l~~~~~~~~~~~~~lcH~Dl~~~Nil~~~~~~~~~~i~lIDwEya~~  213 (302)
T cd05156         158 EDEAKYLRFLLESTSEESGSPVVFCHNDLQEGNILLLNPSSETKKLVLIDFEYASY  213 (302)
T ss_pred             HHHHHHHHHHHhhccCCCCCCceEEecCCCcCeEEecCCCCCCCcEEEEeeCCCCC
Confidence            122223334431      235789999999999999985    7899999998753

The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC) and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. ChoK plays an important role in cell signaling pathways and the regulation of cell growth. Along with PCho, it is involved in malignant transformation through Ras oncogenes in various human cancer

>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]

Probab=96.69  E-value=0.0017  Score=77.43  Aligned_cols=198  Identities=18%  Similarity=0.162  Sum_probs=131.1

Q ss_pred             HHHHHHHHhccCCCCCcceeeeeeeeccC---ceEEEEeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhc
Q 005257          407 AFLAEISSLGRLKHKSLVGLRGWCKREKG---SLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHE  483 (705)
Q Consensus       407 ~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~---~~~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~  483 (705)
                      ...-|++.+.++.|+|++.++.|-.+...   .+.+..|++..-++...+....   .++....+.+..++.+||.|+|+
T Consensus       228 ~~E~e~~~l~k~~~~n~~~~~~~~le~~~~g~~~~v~~~~~s~~~~~~~~q~v~---~i~~~~~r~~~~~~~~GL~~~h~  304 (1351)
T KOG1035|consen  228 TTEIELESLSKIAHDNLGGYFVYGLERLFRGIVLDVLQEICSKVELRSLLQSVG---SIPLETLRILHQKLLEGLAYLHS  304 (1351)
T ss_pred             HHHHHHHHHHhhccccccceeEEeehhhcchHHHHHHHhhcCccchHHHHhhcc---ccCHHHHHHHHHHHhhhHHHHHH
Confidence            34567788889999999999998765322   1233457777777777775433   67888899999999999999998


Q ss_pred             CCCCCeeecCCCCC---CeEEccCCCeeee--eeccceecCCCCcceeeeeeccccCCCccccccCCCC--ccccEEEEe
Q 005257          484 GWEKKVLHRDIKSS---NVLLDKEMNGRLG--DFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRAS--TQTDVFGFG  556 (705)
Q Consensus       484 ~~~~~iiHrDLkp~---NILld~~~~~kL~--DFGla~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~s--~ksDVwS~G  556 (705)
                         ....|.-+..+   +...+.++...++  ||+..+..........  ..-+..|-+||......+.  ...|+|.+|
T Consensus       305 ---~~l~~v~L~~s~~~~~~~~~e~~~~~sl~~~~ss~~l~d~~~~~~--~~~~~~~~~~e~~~~~~~~~~r~~dL~~lg  379 (1351)
T KOG1035|consen  305 ---LSLEHVVLSASSSKESTVDGEGVVAISLSDFDSSKPLPDNEKSFS--DLLAEIRNADEDLKENTAKKSRLTDLWCLG  379 (1351)
T ss_pred             ---hccceeEEecccccccccCccceeecchhhhcccccCCCcccchh--hcCccccccccccccccchhhhhhHHHHHH
Confidence               55555555444   4444556666666  8887765543322211  1234567788887665444  447999999


Q ss_pred             hhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhHHHHHhhhcCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Q 005257          557 ILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVL  636 (705)
Q Consensus       557 vvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L  636 (705)
                      ..+..+..|..+-.....               ...   -+      +......+......|...++++|++..+++...
T Consensus       380 ll~~~~~~~~~i~~~~~~---------------~~~---~l------~~~~~~~~~d~~~~~~~~~~~~Rl~~~~ll~~~  435 (1351)
T KOG1035|consen  380 LLLLQLSQGEDISEKSAV---------------PVS---LL------DVLSTSELLDALPKCLDEDSEERLSALELLTHP  435 (1351)
T ss_pred             HHHhhhhhcCcccccccc---------------hhh---hh------ccccchhhhhhhhhhcchhhhhccchhhhhhch
Confidence            999999987655322110               000   00      001111456677789999999999999988764

>PRK05231 homoserine kinase; Provisional

Probab=96.65  E-value=0.035  Score=59.24  Aligned_cols=142  Identities=15%  Similarity=0.154  Sum_probs=75.3

Q ss_pred             eEEeecCceEEEEEEEcCCCeEEEEEEeccCCchhHHHHHHHHHHhccCCCCC--cceeeee-----eeeccCceEEEEe
Q 005257          370 NVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKS--LVGLRGW-----CKREKGSLMLVYD  442 (705)
Q Consensus       370 ~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~~~~~~~~~Ei~~l~~l~Hpn--iv~l~g~-----~~~~~~~~~lV~E  442 (705)
                      +.|+.|....+|+....+ | .+++|+.....   .+....|+.++..|...+  +.+.+..     +....+..++++|
T Consensus        28 ~~l~~G~~n~~y~v~t~~-g-~~vLK~~~~~~---~~~l~~~~~~l~~L~~~glpvP~~i~~~~G~~~~~~~g~~~~l~~  102 (319)
T PRK05231         28 KGIAEGIENSNFFLTTTQ-G-EYVLTLFERLT---AEDLPFFLGLMQHLAARGVPVPAPVARRDGAALGELAGKPAAIVT  102 (319)
T ss_pred             chhccccccceEEEEeCC-C-cEEEEEeccCC---hHHhHHHHHHHHHHHHCCCCCCcceeCCCCCEeeeeCCEEEEEEE
Confidence            456677778999987643 3 58889875212   233344555555553222  2222211     1112456789999


Q ss_pred             eCCCCChhH-----------HH---HhcCCC--------CcccH-HHHHH------------HHHH-HHHHHHHHhc---
Q 005257          443 YMENGSLDK-----------WI---FQCDGS--------MMLSC-EERIR------------VLKD-VAAGVLYLHE---  483 (705)
Q Consensus       443 ~~~~gsL~~-----------~L---~~~~~~--------~~l~~-~~~~~------------i~~q-ia~gL~yLH~---  483 (705)
                      |++|..+..           .|   +.....        ..+.| .+...            .+.+ +...+..+..   
T Consensus       103 ~l~G~~~~~~~~~~~~~~G~~LA~lH~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~  182 (319)
T PRK05231        103 FLEGKWPRAPTAAHCAEVGEMLARMHLAGRDFPLERPNLRGLAWWRELAPRLLPFLADEQAALLEAELAAQLAFLASAAW  182 (319)
T ss_pred             ecCCCCCCCCCHHHHHHHHHHHHHHHhhhhcCCccCCCCCChHHHHHHHHHHhhccChhHHHHHHHHHHHHHHhhhcccc
Confidence            998875421           11   111000        01111 11111            1111 1112233321   


Q ss_pred             -CCCCCeeecCCCCCCeEEccCCCeeeeeeccce
Q 005257          484 -GWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLAR  516 (705)
Q Consensus       484 -~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~  516 (705)
                       ....++||+|+.|.||+++.+...-|.||+.+.
T Consensus       183 ~~lp~~liHgD~~~~Nil~~~~~~~~iIDf~~~~  216 (319)
T PRK05231        183 PALPRGVIHADLFRDNVLFEGDRLSGFIDFYFAC  216 (319)
T ss_pred             ccCCcccCCCCCCCCcEEEECCceEEEEeccccc
Confidence             134689999999999999966555799999875

>cd05153 HomoserineK_II Homoserine Kinase, type II

Probab=96.57  E-value=0.018  Score=60.70  Aligned_cols=143  Identities=14%  Similarity=0.099  Sum_probs=84.1

Q ss_pred             ceEEeecCceEEEEEEEcCCCeEEEEEEeccCCchhHHHHHHHHHHhccCCCCC--cceeeee-----eeeccCceEEEE
Q 005257          369 ENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKS--LVGLRGW-----CKREKGSLMLVY  441 (705)
Q Consensus       369 ~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~~~~~~~~~Ei~~l~~l~Hpn--iv~l~g~-----~~~~~~~~~lV~  441 (705)
                      .+.|..|....+|+....  +..+++|+...   ........|+.++..|.+.+  +.+.+..     .....+..++|+
T Consensus        19 i~~i~~G~~n~~y~v~~~--~~~~vLr~~~~---~~~~~~~~e~~~l~~L~~~g~~vp~~i~~~~g~~~~~~~~~~~~l~   93 (296)
T cd05153          19 FEGISAGIENTNYFVTTD--SGRYVLTLFEK---VSAEELPFFLALLDHLAERGLPVPRPIADRDGEYLSELAGKPAALV   93 (296)
T ss_pred             eecccCccccceEEEEeC--CCcEEEEEcCC---CChHhccHHHHHHHHHHHCCCCCCccccCCCCcEeeeeCCceEEEE
Confidence            456777878899998664  34688898754   22345667888888775433  3333331     112234568999


Q ss_pred             eeCCCCChhH----HH----------HhcCCC--------CcccHHHHH----------HHHHHHHHHHHHHhc----CC
Q 005257          442 DYMENGSLDK----WI----------FQCDGS--------MMLSCEERI----------RVLKDVAAGVLYLHE----GW  485 (705)
Q Consensus       442 E~~~~gsL~~----~L----------~~~~~~--------~~l~~~~~~----------~i~~qia~gL~yLH~----~~  485 (705)
                      +|++|..+..    ..          +.....        ....|....          .....+..++.++..    ..
T Consensus        94 ~~i~G~~~~~~~~~~~~~lg~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~  173 (296)
T cd05153          94 EFLAGEHLTRPTAAHCRQIGEALARLHLAAQSFPGERNNLRGLAWIRELGKDLLPLLSAEDRALLADELARQDAFDPSDL  173 (296)
T ss_pred             EeCCCCCCCCCCHHHHHHHHHHHHHHHHHhccCCccCCCcCCcHHHHHHHHHhccccCHHHHHHHHHHHHHHHhhhhhcC
Confidence            9999876532    11          110000        011221111          011123334444442    22


Q ss_pred             CCCeeecCCCCCCeEEccCCCeeeeeeccce
Q 005257          486 EKKVLHRDIKSSNVLLDKEMNGRLGDFGLAR  516 (705)
Q Consensus       486 ~~~iiHrDLkp~NILld~~~~~kL~DFGla~  516 (705)
                      ..+++|+|+.|.||+++++..+.|.||+.+.
T Consensus       174 ~~~l~HgD~~~~Nil~~~~~~~~iIDfe~a~  204 (296)
T cd05153         174 PRGVIHADLFRDNVLFDGDELSGVIDFYFAC  204 (296)
T ss_pred             CCcCCccCcCcccEEEeCCceEEEeehhhhc
Confidence            4679999999999999987767899999875

Homoserine kinase is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of unusual homoserine kinases, from a subset of bacteria, which have a PK fold. These proteins do not bear any similarity to the GHMP family homoserine kinases present in most bacteria and eukaryotes. Homoserine kinase catalyzes the transfer of the gamma-phosphoryl group from ATP to L-homoserine producing L-homoserine phosphate, an intermediate in the production of the amino acids threonine, methionine, and isoleucine.

>TIGR00938 thrB_alt homoserine kinase, Neisseria type

Probab=96.32  E-value=0.063  Score=57.06  Aligned_cols=144  Identities=13%  Similarity=0.109  Sum_probs=81.1

Q ss_pred             ceEEeecCceEEEEEEEcCCCeEEEEEEeccCCchhHHHHHHHHHHhccCCCCC--cceeeeee-----eeccCceEEEE
Q 005257          369 ENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKS--LVGLRGWC-----KREKGSLMLVY  441 (705)
Q Consensus       369 ~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~~~~~~~~~Ei~~l~~l~Hpn--iv~l~g~~-----~~~~~~~~lV~  441 (705)
                      .+.++.|....+|+.... ++ .+++|+.....  ...+...|++++..|....  +.+.+...     ....+..++++
T Consensus        27 i~~~~~G~~n~~y~v~t~-~~-~~vLK~~~~~~--~~~~i~~e~~~l~~L~~~g~pvp~~i~t~~g~~~~~~~g~~~~l~  102 (307)
T TIGR00938        27 LKGIAEGVENSNYLLTTD-VG-RYILTLYEKRV--KAEELPFFLALTTHLAARGLPVPKPVKSRDGRQLSTLAGKPACLV  102 (307)
T ss_pred             ccccCCccccceEEEEeC-CC-cEEEEEecCCC--CHHHHHHHHHHHHHHHHCCCCCCccccCCCCCeehhcCCeEEEEE
Confidence            345677777899988653 33 57788765422  1334556677777764322  23333311     11235678999


Q ss_pred             eeCCCCChhH-----------H---HHhcCCC------C---cccHHHHHH------------HHHHHHHHHHHHhc---
Q 005257          442 DYMENGSLDK-----------W---IFQCDGS------M---MLSCEERIR------------VLKDVAAGVLYLHE---  483 (705)
Q Consensus       442 E~~~~gsL~~-----------~---L~~~~~~------~---~l~~~~~~~------------i~~qia~gL~yLH~---  483 (705)
                      ||++|..+..           .   ++.....      .   .-.|.....            ....+.+.++++..   
T Consensus       103 e~i~G~~~~~~~~~~~~~~G~~LA~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~l~~~~~~~l~~~~~~l~~~~~  182 (307)
T TIGR00938       103 EFLQGLSVGRPTAMHCRPVGEVLAWMHLAGAHFPENRKNSLRLEAWHILAEKCFEAAPQLEAHMGAELDKELDYLDKFWP  182 (307)
T ss_pred             EeCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCCCCCChHHHHHHHHhhhhcccccCHHHHHHHHHHHHHHHhhhh
Confidence            9998865421           1   1111000      0   011111110            01123344555532   


Q ss_pred             -CCCCCeeecCCCCCCeEEccCCCeeeeeeccce
Q 005257          484 -GWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLAR  516 (705)
Q Consensus       484 -~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~  516 (705)
                       ....+++|+|+.+.||+++.++...|.||+.+.
T Consensus       183 ~~~~~~l~HgD~~~~Nvl~~~~~~~~vIDfd~~~  216 (307)
T TIGR00938       183 RDLPRGVIHADLFPDNVLFDGDSVKGVIDFYFAC  216 (307)
T ss_pred             hcCCCccCCCCCCcCcEEEECCceEEEeeccccc
Confidence             235789999999999999988767899999874

Homoserine kinase is required in the biosynthesis of threonine from aspartate.The member of this family from Pseudomonas aeruginosa was shown by direct assay and complementation to act specifically as a homoserine kinase.

>PLN02236 choline kinase

Probab=96.07  E-value=0.035  Score=60.04  Aligned_cols=142  Identities=16%  Similarity=0.149  Sum_probs=81.9

Q ss_pred             eEEeecCceEEEEEEEcC----CCeEEEEEEeccCCchhHHHHHHHHHHhccCCCCCcc-eeeeeeeeccCceEEEEeeC
Q 005257          370 NVIGVGGNGKVYKGVLEG----GGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLV-GLRGWCKREKGSLMLVYDYM  444 (705)
Q Consensus       370 ~~LG~G~fg~Vy~~~~~~----~~~~vavK~i~~~~~~~~~~~~~Ei~~l~~l~Hpniv-~l~g~~~~~~~~~~lV~E~~  444 (705)
                      ..|-.|-...+|+.....    .++.+++|+......... .-.+|..++..+...++. ++++.+ . .+   .|.||+
T Consensus        42 ~~l~gGlTN~~y~v~~~~~~~~~~~~~v~Ri~g~~t~~~i-dR~~E~~~~~~l~~~gl~P~~~~~~-~-~g---~v~efi  115 (344)
T PLN02236         42 IPLKGAMTNEVFQIKWPTKEGNLGRKVLVRIYGEGVELFF-DRDDEIRTFECMSRHGQGPRLLGRF-P-NG---RVEEFI  115 (344)
T ss_pred             EEcCCcccceeEEEEeCCCCCCCCCeEEEEEccCCCCeee-chHHHHHHHHHHHHcCCCCceEEEE-C-Cc---eEEEee
Confidence            345557778899987543    236788997755432222 226788888888665554 344433 2 22   589999


Q ss_pred             CCCChhHH-----------------HHhcC--CC-CcccHHHHHHHHHHH-----------------HHHHHHH----hc
Q 005257          445 ENGSLDKW-----------------IFQCD--GS-MMLSCEERIRVLKDV-----------------AAGVLYL----HE  483 (705)
Q Consensus       445 ~~gsL~~~-----------------L~~~~--~~-~~l~~~~~~~i~~qi-----------------a~gL~yL----H~  483 (705)
                      ++.+|...                 +++.+  .. ....+.++.++..++                 ...+..|    ..
T Consensus       116 ~g~~l~~~~l~~~~~~~~ia~~L~~lH~~~~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~L~~~~~~  195 (344)
T PLN02236        116 HARTLSAADLRDPEISALIAAKLREFHSLDMPGPKNVLLWDRLRNWLKEAKNLCSPEEAKEFRLDSLEDEINLLEKELSG  195 (344)
T ss_pred             CCCCCCHHHcCChHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhhcCcchhhhcCHHHHHHHHHHHHHHhcc
Confidence            87666421                 11111  01 012233333332211                 1112222    21


Q ss_pred             -CCCCCeeecCCCCCCeEEcc-CCCeeeeeecccee
Q 005257          484 -GWEKKVLHRDIKSSNVLLDK-EMNGRLGDFGLARM  517 (705)
Q Consensus       484 -~~~~~iiHrDLkp~NILld~-~~~~kL~DFGla~~  517 (705)
                       .....++|+|+++.|||+++ ++.+++.||..+..
T Consensus       196 ~~~~~~~cH~Dl~~~Nil~~~~~~~~~lID~Eya~~  231 (344)
T PLN02236        196 DDQEIGFCHNDLQYGNIMIDEETRAITIIDYEYASY  231 (344)
T ss_pred             cCCCceEEeCCCCcCcEEEeCCCCcEEEEeehhccc
Confidence             22457999999999999986 46799999998763

>cd05152 MPH2' Macrolide 2'-Phosphotransferase (MPH2')

Probab=95.95  E-value=0.064  Score=56.12  Aligned_cols=31  Identities=23%  Similarity=0.471  Sum_probs=26.0

Q ss_pred             CCeeecCCCCCCeEEccCCC-eeeeeecccee
Q 005257          487 KKVLHRDIKSSNVLLDKEMN-GRLGDFGLARM  517 (705)
Q Consensus       487 ~~iiHrDLkp~NILld~~~~-~kL~DFGla~~  517 (705)
                      ..++|+|+.|.|||++++++ .-|.||+.+..
T Consensus       185 ~~lvHGD~~~~Nilv~~~~~~~gviDWe~a~i  216 (276)
T cd05152         185 TVLVHGDLHPGHILIDEDARVTGLIDWTEAKV  216 (276)
T ss_pred             CeeEeCCCCCCcEEEeCCCCEEEEECcHhccc
Confidence            56999999999999997555 46999998864

MPH2' is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). MPH2' catalyzes the transfer of the gamma-phosphoryl group from ATP to the 2'-hydroxyl of macrolide antibiotics such as erythromycin, clarithromycin, and azithromycin, among others. Macrolides penetrate the bacterial cell and bind to ribosomes, where it interrupts protein elongation, leading ultimately to the demise of the bacterium. Phosphorylation of macrolides leads to their inactivation. Based on substrate specificity and amino acid sequence, MPH2' is divided into types I and II, encoded by mphA and mphB genes, respectively. MPH2'I inactivates 14-membered ring macrolides while MPH2'II inactivates both 14- and 16-membered ring macrolides. Enzymatic inactivation of macrolides has been reported

>KOG1826 consensus Ras GTPase activating protein RasGAP/neurofibromin [Defense mechanisms]

Probab=95.79  E-value=0.0005  Score=83.25  Aligned_cols=163  Identities=14%  Similarity=0.016  Sum_probs=113.3

Q ss_pred             HHHHHHHHHhccCCCCCcceeeeeee-eccCceEEEEeeCCCCChhHHHHhcCC-CCcccHHHHHHHHHHHHHHHHHHhc
Q 005257          406 RAFLAEISSLGRLKHKSLVGLRGWCK-REKGSLMLVYDYMENGSLDKWIFQCDG-SMMLSCEERIRVLKDVAAGVLYLHE  483 (705)
Q Consensus       406 ~~~~~Ei~~l~~l~Hpniv~l~g~~~-~~~~~~~lV~E~~~~gsL~~~L~~~~~-~~~l~~~~~~~i~~qia~gL~yLH~  483 (705)
                      +..+.|...+++..|+++.....-.. .+....+..++|+.+|.+.+.|-+.-. ...+...-+.....+......-+|.
T Consensus      1274 emll~e~de~~~~~h~~~~~~p~rI~ps~s~ee~~r~~~~~~g~~f~iIikg~ee~~~ld~~~v~~~~kvsvl~~~~~ls 1353 (2724)
T KOG1826|consen 1274 EMLLSERDELREAKHYLTEVDPLRIPPSESTEEYIRSLYVEFGKLFSIIIKGLEESPDLDRSPVHLRHKVSVLNRNVILS 1353 (2724)
T ss_pred             HhhhhhhhhhhhhhceeeecccccCCCCCChHHHHHHHHHHHhHHHHHHHhccccCCcchhchHHHHHHHHHhccchhhh
Confidence            33455666666678998766544322 234456889999999999998876422 2223332233333333555555553


Q ss_pred             C--CCCCeeecCCCCCCeEEccCCCeeeeeeccceecCCCCcceeeeeeccccCCCccccccCCCCccccEEEEehhHHH
Q 005257          484 G--WEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILE  561 (705)
Q Consensus       484 ~--~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~E  561 (705)
                      .  ...-.+|++||+-|.+|..+.++|++++|+.+...+.... ....++++.|++|+....-+++.++|+|..|+-+|+
T Consensus      1354 ~tnlg~T~v~~~Lkf~lpmIVtny~v~~gk~gLdKIknp~~sf-~Gl~l~sp~~v~qli~N~ik~t~rsdilr~s~~ly~ 1432 (2724)
T KOG1826|consen 1354 LTNLGNTNVSKSLKFTLPMIVTNYNVKLGKGGLDKIKNPVLSF-FGLELCSPIYVLQLIKNEIKFTKRSDILRRSLSLYL 1432 (2724)
T ss_pred             cccCCccchhhhhhhhccceecCCcccccccccccccCchHhh-hhhhhCCHHHHHHHHHHHHhhhhHHHHHHHHHHHHH
Confidence            2  2345899999999999999999999999999844333222 223467888999999888888989999999999999


Q ss_pred             HhhCCCCC
Q 005257          562 VLSGRRPI  569 (705)
Q Consensus       562 lltG~~Pf  569 (705)
                      ..-|..+|
T Consensus      1433 rs~~n~~f 1440 (2724)
T KOG1826|consen 1433 RSDGNAYF 1440 (2724)
T ss_pred             HhcccHHH
Confidence            98887665

>KOG1093 consensus Predicted protein kinase (contains TBC and RHOD domains) [General function prediction only]

Probab=95.58  E-value=0.01  Score=65.23  Aligned_cols=51  Identities=16%  Similarity=0.253  Sum_probs=40.2

Q ss_pred             HHHHHHHHHHhccCCCCCcceeeeeeeeccCceEEEEeeCCCCChhHHHHhc
Q 005257          405 TRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQC  456 (705)
Q Consensus       405 ~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~lV~E~~~~gsL~~~L~~~  456 (705)
                      ..+++-...+++.+.|+|+.+.+.+.........+|+|++ +.||++.+...
T Consensus        26 s~~ilgr~~~lktl~~~~l~~yl~~~r~~~~r~IVV~e~~-~~Sled~~~~~   76 (725)
T KOG1093|consen   26 SIQILGRFQYLKSLQHDNLCQYLDFSRGKHERVIVVMEHY-TMSLEDILKTG   76 (725)
T ss_pred             HHHHhhhhHHHHhhcCccceeeEeeecCccceEEEEehhh-ccchHHHHHhc
Confidence            3556777888999999999999987665445678999999 56999988653

>KOG2268 consensus Serine/threonine protein kinase [Signal transduction mechanisms; General function prediction only]

Probab=95.56  E-value=0.014  Score=60.94  Aligned_cols=149  Identities=17%  Similarity=0.174  Sum_probs=95.5

Q ss_pred             cCHHHHHHHhC---CCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCC----------------chhH------HHH
Q 005257          354 ITYQEIEAATK---GFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHEN----------------DGGT------RAF  408 (705)
Q Consensus       354 ~~~~el~~at~---~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~----------------~~~~------~~~  408 (705)
                      +.|-.|....+   -++..+.||-|--+.||.+.+.. |.+.++|.-+...                .+..      -..
T Consensus        79 yDyLAlktL~~R~~v~svGnqIGVGKESDIY~v~d~~-G~~~~lK~HRLGRtSFR~Vk~kRDY~r~r~~~sWlyLSRlaa  157 (465)
T KOG2268|consen   79 YDYLALKTLSNRGSVESVGNQIGVGKESDIYVVADEE-GNPLILKLHRLGRTSFRNVKNKRDYLRKRKSGSWLYLSRLAA  157 (465)
T ss_pred             chHHHHHHHHhcchhhhhccccccccccceEEEecCC-CCchhHHHHhhhhhhHHHhhhhhhhHhcCCccchhhhHHHHH
Confidence            34444544443   35678999999999999999864 6778888432110                0000      123


Q ss_pred             HHHHHHhccCCC-C-CcceeeeeeeeccCceEEEEeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCC
Q 005257          409 LAEISSLGRLKH-K-SLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWE  486 (705)
Q Consensus       409 ~~Ei~~l~~l~H-p-niv~l~g~~~~~~~~~~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~  486 (705)
                      .+|...|+.|.- . -+.+.+++     +..++|||++.+-.|...-+      ......++.-+.++   +.-|..   
T Consensus       158 ~kEfafmkaL~e~gfpVPkpiD~-----~RH~Vvmelv~g~Pl~~v~~------v~d~~~ly~~lm~~---Iv~la~---  220 (465)
T KOG2268|consen  158 TKEFAFMKALYERGFPVPKPIDH-----NRHCVVMELVDGYPLRQVRH------VEDPPTLYDDLMGL---IVRLAN---  220 (465)
T ss_pred             HHHHHHHHHHHHcCCCCCCcccc-----cceeeHHHhhcccceeeeee------cCChHHHHHHHHHH---HHHHHH---
Confidence            457777777742 2 23334442     35589999998877765432      22333333333332   334444   


Q ss_pred             CCeeecCCCCCCeEEccCCCeeeeeeccceecCC
Q 005257          487 KKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGH  520 (705)
Q Consensus       487 ~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~~  520 (705)
                      +|+||+|..-=||++++++.++++||--+-...+
T Consensus       221 ~GlIHgDFNEFNimv~dd~~i~vIDFPQmvS~sh  254 (465)
T KOG2268|consen  221 HGLIHGDFNEFNIMVKDDDKIVVIDFPQMVSTSH  254 (465)
T ss_pred             cCceecccchheeEEecCCCEEEeechHhhccCC
Confidence            9999999999999999999999999986654443

>COG3173 Predicted aminoglycoside phosphotransferase [General function prediction only]

Probab=95.55  E-value=0.12  Score=54.94  Aligned_cols=138  Identities=12%  Similarity=0.136  Sum_probs=76.8

Q ss_pred             EEEEEEEcCCCeEEEEEEecc--CCchhHHHHHHHHHHhccCC--CCCcceeeeeeeecc-CceEEEEeeCCCCChhHHH
Q 005257          379 KVYKGVLEGGGAEIAVKRISH--ENDGGTRAFLAEISSLGRLK--HKSLVGLRGWCKREK-GSLMLVYDYMENGSLDKWI  453 (705)
Q Consensus       379 ~Vy~~~~~~~~~~vavK~i~~--~~~~~~~~~~~Ei~~l~~l~--Hpniv~l~g~~~~~~-~~~~lV~E~~~~gsL~~~L  453 (705)
                      .+|.....  ++.+++. ...  .......+..+|..+|+.+.  ---....++.|.++. +..+.||+|++|..+.+.+
T Consensus        40 ~t~~~~~~--~~~~vlR-~P~~~~~~~~~~~~~re~~~i~~l~~~~vP~p~~~~~~~~~~~g~pf~v~~~veGe~~~~~~  116 (321)
T COG3173          40 DTFRLGDT--GQKYVLR-KPPRGDPVESAHDEKREYRVIAALLDVDVPVPRAFGLCGEGYLGTPFYVMEWVEGEVVWSAL  116 (321)
T ss_pred             ceEEEecC--CceEEEe-cCCccccchhhhHHHhHHHHHHHhcCCCCCCcccccccccCCCCCceEEEEEecceeccCcC
Confidence            44444433  5667777 331  12233455667777777763  233455677787655 5779999999884332222


Q ss_pred             HhcCC-----------------------------------CCcccHHHHHHHH--------HHHHHHHHHHhcC-----C
Q 005257          454 FQCDG-----------------------------------SMMLSCEERIRVL--------KDVAAGVLYLHEG-----W  485 (705)
Q Consensus       454 ~~~~~-----------------------------------~~~l~~~~~~~i~--------~qia~gL~yLH~~-----~  485 (705)
                      .....                                   ++.-.|...+..+        -....-..+|+..     .
T Consensus       117 ~~~~~~~~~~~~~l~~~La~LH~ida~~~~~~g~~~~~~~rql~~~~~~~~~~~~~~~~~~p~~~~~~~Wl~~~~p~~~~  196 (321)
T COG3173         117 PPESLGRQFALDALADFLAELHSIDAAGLPDPGKPNAYRGRQLARWDDEYRRAKKELGGRIPLADRLIKWLEANRPPWAG  196 (321)
T ss_pred             CcccchHHHHHHHHHHHHHHHhCCCCcCCCCCCccCccccchhhHHHHHHHHHHHhccCCCchHHHHHHHHHhcCCCcCC
Confidence            11000                                   0000111111100        0112223333321     1


Q ss_pred             CCCeeecCCCCCCeEEccCCCeeeeeeccceecC
Q 005257          486 EKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHG  519 (705)
Q Consensus       486 ~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~  519 (705)
                      ...++|+|+.+.||+++.+.-+=|.||+++..-+
T Consensus       197 ~~~lvHGD~~~gNlii~~~~~~gVlDwe~~~lGD  230 (321)
T COG3173         197 PPVLVHGDYRPGNLIIDPGRPTGVLDWELATLGD  230 (321)
T ss_pred             CceeeeCCcccCCEEEeCCCeeEEEeccccccCC
Confidence            3579999999999999988888999999987643

>TIGR01767 MTRK 5-methylthioribose kinase

Probab=95.30  E-value=0.14  Score=55.15  Aligned_cols=74  Identities=18%  Similarity=0.038  Sum_probs=46.1

Q ss_pred             EEeecCceEEEEEEEcCCCeEEEEEEeccC-------CchhHHHHHHHHHHhccCC--CCCcce-eeeeeeeccCceEEE
Q 005257          371 VIGVGGNGKVYKGVLEGGGAEIAVKRISHE-------NDGGTRAFLAEISSLGRLK--HKSLVG-LRGWCKREKGSLMLV  440 (705)
Q Consensus       371 ~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~-------~~~~~~~~~~Ei~~l~~l~--Hpniv~-l~g~~~~~~~~~~lV  440 (705)
                      .||.|....||++...++++.|+||.-...       ..-..+...-|.+.|....  -|..++ ++. +.  .....+|
T Consensus         2 EigdGnlN~VfrV~~~~g~~svIVKQAlp~vRv~g~~wpl~~~R~~~E~~~L~~~~~~~P~~vP~vy~-~D--~e~~~~v   78 (370)
T TIGR01767         2 EVGDGNLNLVFHVYDQEGDRAAIVKQALPYVRVVGESWPLTLDRARIESSALIRQGEHVPHLVPRIFH-FD--TEMAVTV   78 (370)
T ss_pred             cCCCCceEEEEEEEcCCCCeeEEEEEcCHHHhhcCCCCCCCccHHHHHHHHHHHhhccCccccCeEEE-Ec--cccceeh
Confidence            479999999999998654468999963211       1222334455666776652  354444 444 32  3455799


Q ss_pred             EeeCCCC
Q 005257          441 YDYMENG  447 (705)
Q Consensus       441 ~E~~~~g  447 (705)
                      ||+++..
T Consensus        79 MEdL~~~   85 (370)
T TIGR01767        79 MEDLSHH   85 (370)
T ss_pred             HhhCccc
Confidence            9999653

This enzyme is involved in the methionine salvage pathway in certain bacteria.

>PF03881 Fructosamin_kin: Fructosamine kinase; InterPro: IPR016477 Ketosamines derive from a non-enzymatic reaction between a sugar and a protein []

Probab=94.95  E-value=0.21  Score=52.52  Aligned_cols=75  Identities=20%  Similarity=0.312  Sum_probs=45.5

Q ss_pred             CcceEEeecCceEEEEEEEcCCCeEEEEEEeccCCchhHHHHHHHHHHhccCC---CCCcceeeeeeeeccCceEEEEee
Q 005257          367 SEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLK---HKSLVGLRGWCKREKGSLMLVYDY  443 (705)
Q Consensus       367 ~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~~~~~~~~~Ei~~l~~l~---Hpniv~l~g~~~~~~~~~~lV~E~  443 (705)
                      ...+.|+-|....+|+..  .+++.+.||.-.   ......|..|..-|+.|.   --.+.+.+++... ++..+||+||
T Consensus        20 ~~~~~v~GG~i~~a~~~~--~~~~~~FvK~~~---~~~~~~f~~Ea~gL~~L~~~~~~~vP~vi~~G~~-~~~~fLlle~   93 (288)
T PF03881_consen   20 TSIEPVSGGDINEAYRLD--TDGGSYFVKVNS---ESGRDMFEGEAEGLKALAEANPIRVPKVIAWGEY-DDDAFLLLEF   93 (288)
T ss_dssp             -EEEEE--SSSSEEEEEE--TTS-EEEEEEEE---GGGCCHHHHHHHHHHHHCHTTTSBS--EEEEEE--SSCCEEEEE-
T ss_pred             eeeEecCCCChhheEEEE--CCCccEEEEecC---hhhHHHHHHHHHHHHHHHhcCCCCCCeEEEEEee-cCCceEEEEe
Confidence            345678989999999987  457789999765   333456778888888773   3345667776654 4456899999


Q ss_pred             CCCC
Q 005257          444 MENG  447 (705)
Q Consensus       444 ~~~g  447 (705)
                      ++.+
T Consensus        94 l~~~   97 (288)
T PF03881_consen   94 LEMG   97 (288)
T ss_dssp             ----
T ss_pred             ecCC
Confidence            9876

Ketosamine-3-kinases (KT3K), of which fructosamine-3-kinase (FN3K) is the best-known example, catalyse the phosphorylation of the ketosamine moiety of glycated proteins. The instability of a phosphorylated ketosamine leads to its degradation, and KT3K is thus thought to be involved in protein repair []. The function of the prokaryotic members of this group has not been established. However, several lines of evidence indicate that they may function as fructosamine-3-kinases (FN3K). First, they are similar to characterised FN3K from mouse and human. Second, the Escherichia coli members are found in close proximity on the genome to fructose-6-phosphate kinase (PfkB). Last, FN3K activity has been found in a Anacystis montana (Gloeocapsa montana Kutzing 1843) [], indicating such activity-directly demonstrated in eukaryotes-is nonetheless not confined to eukaryotes. This family includes eukaryotic fructosamine-3-kinase enzymes [] which may initiate a process leading to the deglycation of fructoselysine and of glycated proteins and in the phosphorylation of 1-deoxy-1-morpholinofructose, fructoselysine, fructoseglycine, fructose and glycated lysozyme. The family also includes bacterial members that have not been characterised but probably have a similar or identical function. For additional information please see [].; PDB: 3JR1_B 3F7W_A.

>PLN02421 phosphotransferase, alcohol group as acceptor/kinase

Probab=94.61  E-value=0.18  Score=54.31  Aligned_cols=142  Identities=17%  Similarity=0.192  Sum_probs=79.3

Q ss_pred             eEEeecCceEEEEEEEcCC---CeEEEEEEeccCCchhHHHHHHHHHHhccCCCCCcc-eeeeeeeeccCceEEEEeeCC
Q 005257          370 NVIGVGGNGKVYKGVLEGG---GAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLV-GLRGWCKREKGSLMLVYDYME  445 (705)
Q Consensus       370 ~~LG~G~fg~Vy~~~~~~~---~~~vavK~i~~~~~~~~~~~~~Ei~~l~~l~Hpniv-~l~g~~~~~~~~~~lV~E~~~  445 (705)
                      +.|..|=...+|+....+.   +..|++|+....... .-.-.+|..+++.+..-++. ++++++ . .+   +|.+|++
T Consensus        20 ~~l~gGlTN~~~~v~~~~~~~~~~~~v~Ri~g~~t~~-~IdR~~E~~il~~l~~~gl~P~~l~~~-~-~G---~i~~fi~   93 (330)
T PLN02421         20 ERISGGITNLLLKVSVKEENGNEVSVTVRLFGPNTDY-VIDRERELQAIKYLSAAGFGAKLLGVF-G-NG---MIQSFIN   93 (330)
T ss_pred             EEeCCcccceEEEEEecCCCCCCceEEEEEecCCcCe-EechHHHHHHHHHHHhcCCCCceeEEe-C-Cc---Eeehhhc
Confidence            4455577778998876532   237888876543322 22235788888888766664 345443 2 22   5899997


Q ss_pred             CCChhH-------HH----------HhcC--CCC-cccHHHHHHHHHHH----------------------HHHHHHHhc
Q 005257          446 NGSLDK-------WI----------FQCD--GSM-MLSCEERIRVLKDV----------------------AAGVLYLHE  483 (705)
Q Consensus       446 ~gsL~~-------~L----------~~~~--~~~-~l~~~~~~~i~~qi----------------------a~gL~yLH~  483 (705)
                      +-.|..       .+          +..+  ... .-.|..+.++..++                      ..-+..+..
T Consensus        94 g~~l~~~~l~~~~~~~~ia~~L~~lH~~~~~~~~~~~~~~~i~~y~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~  173 (330)
T PLN02421         94 ARTLTPSDMRKPKVAAEIAKELRRLHQVEIPGSKEPQLWNDIFKFYEKASTVKFEDPEKQKKYETISFEELRDEIVELKE  173 (330)
T ss_pred             CCCCChHHCCCHHHHHHHHHHHHHHhCCCCCCCCCCcHHHHHHHHHHHhhhcccCcHHHhhhhcccCHHHHHHHHHHHHH
Confidence            765531       11          1111  000 11233332222221                      111221111


Q ss_pred             -----CCCCCeeecCCCCCCeEEcc-CCCeeeeeecccee
Q 005257          484 -----GWEKKVLHRDIKSSNVLLDK-EMNGRLGDFGLARM  517 (705)
Q Consensus       484 -----~~~~~iiHrDLkp~NILld~-~~~~kL~DFGla~~  517 (705)
                           ......+|.|+.+.|||+++ ++.++++||..|..
T Consensus       174 ~~~~~~~~~v~CHnDl~~~NiL~~~~~~~l~lID~EYag~  213 (330)
T PLN02421        174 ITDSLKAPVVFAHNDLLSGNLMLNEDEGKLYFIDFEYGSY  213 (330)
T ss_pred             HhccCCCCeEEEECCCCcccEEEeCCCCcEEEEcccccCC
Confidence                 11245899999999999975 57899999998753

>COG5072 ALK1 Serine/threonine kinase of the haspin family [Cell division and chromosome partitioning]

Probab=94.47  E-value=0.11  Score=55.19  Aligned_cols=75  Identities=24%  Similarity=0.248  Sum_probs=59.4

Q ss_pred             ccCceEEEEeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeee
Q 005257          433 EKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDF  512 (705)
Q Consensus       433 ~~~~~~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DF  512 (705)
                      +....|++|++- |++|...       ..-.+.+...++.+.+.-+.-+..  +-+.=|||+.-.||||+ +|++-|+||
T Consensus       297 e~~y~yl~~kdh-gt~is~i-------k~~~~~e~lsff~s~~sil~~lek--kf~fehrnlt~~niLId-~GnvtLIDf  365 (488)
T COG5072         297 ETLYLYLHFKDH-GTPISII-------KADRSEEELSFFWSCISILDILEK--KFPFEHRNLTLDNILID-EGNVTLIDF  365 (488)
T ss_pred             CceEEEEEEecC-Cceeeee-------ecccHHHHHHHHHHHHHHHhhhhh--cCCcccccccccceeee-cCceEEEEe
Confidence            344567777776 4454321       135688999999999888888876  57889999999999999 999999999


Q ss_pred             ccceec
Q 005257          513 GLARMH  518 (705)
Q Consensus       513 Gla~~~  518 (705)
                      -++|.-
T Consensus       366 klsRl~  371 (488)
T COG5072         366 KLSRLS  371 (488)
T ss_pred             eeeecc
Confidence            999954

>KOG2270 consensus Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning]

Probab=94.45  E-value=0.19  Score=53.67  Aligned_cols=144  Identities=19%  Similarity=0.216  Sum_probs=94.4

Q ss_pred             CcceEEeecCceEEEEEEEcCCCeEEEEEEeccCC---------------------chhHHH-----HHHHHHHhccCCC
Q 005257          367 SEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHEN---------------------DGGTRA-----FLAEISSLGRLKH  420 (705)
Q Consensus       367 ~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~---------------------~~~~~~-----~~~Ei~~l~~l~H  420 (705)
                      .+..+|..|--+.||.+.-. +|..+|||+.+..-                     ....+.     -..|++-|.+|+.
T Consensus       147 ~inGCiSTGKEANVYHat~~-dG~~~AIKIYKTSILvFKDRdRYV~GEfRFRhgyck~NPRKMVk~WAEKE~RNLkRl~~  225 (520)
T KOG2270|consen  147 EINGCISTGKEANVYHATEE-DGSEFAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKHNPRKMVKTWAEKEMRNLKRLNN  225 (520)
T ss_pred             ecccccccCccceeEeeecC-CCceEEEEEEeeeEEEEechhhhccceeeeecccccCCcHHHHHHHHHHHHHHHHHHHh
Confidence            34567889999999999876 46779999865320                     011111     1346777777765


Q ss_pred             CCcceeeeeeeeccCceEEEEeeCCCCChh-HHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCe
Q 005257          421 KSLVGLRGWCKREKGSLMLVYDYMENGSLD-KWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNV  499 (705)
Q Consensus       421 pniv~l~g~~~~~~~~~~lV~E~~~~gsL~-~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NI  499 (705)
                      ..|.- -.-..- + ...|||+|+.....- -.|+    ...++...+..+-.|++.-|.-|..  ..++||.||.-=|+
T Consensus       226 aGIP~-PePIlL-k-~hVLVM~FlGrdgw~aPkLK----d~~ls~~ka~~~Y~~~v~~MR~lY~--~c~LVHADLSEfN~  296 (520)
T KOG2270|consen  226 AGIPC-PEPILL-K-NHVLVMEFLGRDGWAAPKLK----DASLSTSKARELYQQCVRIMRRLYQ--KCRLVHADLSEFNL  296 (520)
T ss_pred             cCCCC-CCceee-e-cceEeeeeccCCCCcCcccc----cccCChHHHHHHHHHHHHHHHHHHH--Hhceeccchhhhhh
Confidence            55321 111111 2 236999999532221 1111    1247777788888888888888877  47899999999999


Q ss_pred             EEccCCCeeeeeeccceecCCC
Q 005257          500 LLDKEMNGRLGDFGLARMHGHG  521 (705)
Q Consensus       500 Lld~~~~~kL~DFGla~~~~~~  521 (705)
                      |+. +|.+.|+|-+-+....++
T Consensus       297 Lyh-dG~lyiIDVSQSVE~DHP  317 (520)
T KOG2270|consen  297 LYH-DGKLYIIDVSQSVEHDHP  317 (520)
T ss_pred             eEE-CCEEEEEEccccccCCCh
Confidence            995 468999998887655544

>PF01633 Choline_kinase: Choline/ethanolamine kinase; InterPro: IPR002573 Choline kinase, (ATP:choline phosphotransferase, 2

Probab=94.44  E-value=0.062  Score=53.65  Aligned_cols=31  Identities=29%  Similarity=0.435  Sum_probs=22.3

Q ss_pred             CCeeecCCCCCCeEE-ccCCCeeeeeecccee
Q 005257          487 KKVLHRDIKSSNVLL-DKEMNGRLGDFGLARM  517 (705)
Q Consensus       487 ~~iiHrDLkp~NILl-d~~~~~kL~DFGla~~  517 (705)
                      ..++|.|+.|.|||+ +.++.++++||..|..
T Consensus       143 ~v~cHnDl~~~Nil~~~~~~~~~lIDfEya~~  174 (211)
T PF01633_consen  143 LVFCHNDLNPGNILINNKDGEVKLIDFEYAGY  174 (211)
T ss_dssp             EEEE-S--SGGGEEETSSSSCEEE--GTT-EE
T ss_pred             ceEeeccCccccEEeccCCCeEEEecHHHHhh
Confidence            579999999999999 8889999999998754

7.1.32 from EC) belongs to the choline/ethanolamine kinase family. Ethanolamine and choline are major membrane phospholipids, in the form of glycerophosphoethanolamine and glycerophosphocholine. Ethanolamine is also a component of the glycosylphosphatidylinositol (GPI) anchor, which is necessary for cell-surface protein attachment []. The de novo synthesis of these phospholipids begins with the creation of phosphoethanolamine and phosphocholine by ethanolamine and choline kinases in the first step of the CDP-ethanolamine pathway [, ]. There are two putative choline/ethanolamine kinases (C/EKs) in the Trypanosoma brucei genome. Ethanolamine kinase has no choline kinase activity [] and its activity is inhibited by ADP []. Inositol supplementation represses ethanolamine kinase, decreasing the incorporation of ethanolamine into the CDP-ethanolamine pathway and into phosphatidylethanolamine and phosphatidylcholine []. ; GO: 0016773 phosphotransferase activity, alcohol group as acceptor; PDB: 3C5I_A 2IG7_A 3LQ3_A 3FEG_A 2QG7_E 3FI8_A 1NW1_A 3MES_A 3G15_A 2CKP_B ....

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	705
3tl8_A	349	The Avrptob-Bak1 Complex Reveals Two Structurally S		1e-38
3uim_A	326	Structural Basis For The Impact Of Phosphorylation		1e-37
3hgk_A	327	Crystal Structure Of Effect Protein Avrptob Complex		2e-28
2qkw_B	321	Structural Basis For Activation Of Plant Immunity B		1e-27
2nry_A	307	Crystal Structure Of Irak-4 Length = 307		4e-27
2nru_A	307	Crystal Structure Of Irak-4 Length = 307		8e-27
2oib_A	301	Crystal Structure Of Irak4 Kinase Domain Apo Form L		1e-26
2o8y_A	298	Apo Irak4 Kinase Domain Length = 298		1e-25
3ppz_A	309	Crystal Structure Of Ctr1 Kinase Domain In Complex		4e-20
3p86_A	309	Crystal Structure Of Ctr1 Kinase Domain Mutant D676		5e-20
1k9a_A	450	Crystal Structure Analysis Of Full-Length Carboxyl-		2e-19
4gs6_A	315	Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxoz		3e-19
3d7u_A	263	Structural Basis For The Recognition Of C-Src By It		3e-19
2eva_A	307	Structural Basis For The Interaction Of Tak1 Kinase		3e-19
3ujo_A	281	Galactose-Specific Seed Lectin From Dolichos Lablab		4e-19
1byg_A	278	Kinase Domain Of Human C-Terminal Src Kinase (Csk)		4e-19
3miy_A	266	X-Ray Crystal Structure Of Itk Complexed With Sunit		7e-19
3d7t_A	269	Structural Basis For The Recognition Of C-Src By It		7e-19
1sm2_A	264	Crystal Structure Of The Phosphorylated Interleukin		1e-18
3v5j_A	266	Crystal Structure Of Interleukin-2 Inducible T-Cell		1e-18
4hct_A	269	Crystal Structure Of Itk In Complex With Compound 5		1e-18
3qgw_A	286	Crystal Structure Of Itk Kinase Bound To An Inhibit		1e-18
3t9t_A	267	Crystal Structure Of Btk Mutant (F435t,K596r) Compl		4e-18
1mqb_A	333	Crystal Structure Of Ephrin A2 (Epha2) Receptor Pro		8e-18
2qok_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f:		1e-17
3kul_B	325	Kinase Domain Of Human Ephrin Type-A Receptor 8 (Ep		2e-17
2r2p_A	295	Kinase Domain Of Human Ephrin Type-A Receptor 5 (Ep		2e-17
2zm1_A	285	Crystal Structure Of Imidazo Pyrazin 1 Bound To The		2e-17
1qpd_A	279	Structural Analysis Of The Lymphocyte-specific Kina		2e-17
3kmm_A	288	Structure Of Human Lck Kinase With A Small Molecule		2e-17
3kul_A	325	Kinase Domain Of Human Ephrin Type-A Receptor 8 (Ep		2e-17
3kxz_A	287	The Complex Crystal Structure Of Lck With A Probe M		2e-17
1qpe_A	279	Structural Analysis Of The Lymphocyte-Specific Kina		2e-17
2ofv_A	277	Crystal Structure Of Aminoquinazoline 1 Bound To Lc		2e-17
2ofu_A	273	X-Ray Crystal Structure Of 2-Aminopyrimidine Carbam		2e-17
3bys_A	277	Co-Crystal Structure Of Lck And Aminopyrimidine Ami		3e-17
2pl0_A	289	Lck Bound To Imatinib Length = 289		3e-17
2of2_A	271	Crystal Structure Of Furanopyrimidine 8 Bound To Lc		3e-17
3lck_A	271	The Kinase Domain Of Human Lymphocyte Kinase (Lck),		3e-17
3bym_A	272	X-Ray Co-Crystal Structure Aminobenzimidazole Triaz		3e-17
2qoo_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f:		3e-17
3fxx_A	371	Human Epha3 Kinase And Juxtamembrane Region Bound T		3e-17
2qoi_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f:		3e-17
2og8_A	265	Crystal Structure Of Aminoquinazoline 36 Bound To L		3e-17
2qof_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f		4e-17
2qod_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y602f		4e-17
2qoc_A	344	Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp		4e-17
2gsf_A	373	The Human Epha3 Receptor Tyrosine Kinase And Juxtam		4e-17
2fmd_A	240	Structural Basis Of Carbohydrate Recognition By Bow		4e-17
3dzq_A	361	Human Epha3 Kinase Domain In Complex With Inhibitor		4e-17
2rei_A	318	Kinase Domain Of Human Ephrin Type-a Receptor 7 (ep		4e-17
2qol_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596:y		5e-17
2hel_A	306	Crystal Structure Of A Mutant Epha4 Kinase Domain (		6e-17
1jpa_A	312	Crystal Structure Of Unphosphorylated Ephb2 Recepto		7e-17
3mpm_A	267	Lck Complexed With A Pyrazolopyrimidine Length = 26		1e-16
2y6m_A	291	Crystal Structure Of Epha4 Kinase Domain Length = 2		1e-16
2xyu_A	285	Crystal Structure Of Epha4 Kinase Domain In Complex		1e-16
4apc_A	350	Crystal Structure Of Human Nima-Related Kinase 1 (N		1e-16
1lul_A	253	Db58, A Legume Lectin From Dolichos Biflorus Length		2e-16
2qon_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f:		2e-16
2qo7_A	373	Human Epha3 Kinase And Juxtamembrane Region, Dephos		3e-16
1fat_A	252	Phytohemagglutinin-L Length = 252		4e-16
2qob_A	344	Human Epha3 Kinase Domain, Base Structure Length =		4e-16
3rzf_A	677	Crystal Structure Of Inhibitor Of Kappab Kinase Bet		5e-16
3qa8_A	676	Crystal Structure Of Inhibitor Of Kappa B Kinase Be		5e-16
3sxr_A	268	Crystal Structure Of Bmx Non-Receptor Tyrosine Kina		6e-16
1bjq_A	253	The Dolichos Biflorus Seed Lectin In Complex With A		8e-16
3usu_A	256	Crystal Structure Of Butea Monosperma Seed Lectin L		9e-16
2hen_A	286	Crystal Structure Of The Ephb2 Receptor Kinase Doma		1e-15
3dtc_A	271	Crystal Structure Of Mixed-Lineage Kinase Mlk1 Comp		2e-15
3usu_B	242	Crystal Structure Of Butea Monosperma Seed Lectin L		2e-15
2zoq_A	382	Structural Dissection Of Human Mitogen-Activated Ki		3e-15
3sa0_A	360	Complex Of Erk2 With Norathyriol Length = 360		3e-15
4fv7_A	360	Crystal Structure Of The Erk2 Complexed With E94 Le		3e-15
4fux_A	360	Crystal Structure Of The Erk2 Complexed With E75 Le		3e-15
4fv6_A	360	Crystal Structure Of The Erk2 Complexed With E57 Le		4e-15
2vwu_A	302	Ephb4 Kinase Domain Inhibitor Complex Length = 302		4e-15
3zu7_A	365	Crystal Structure Of A Designed Selected Ankyrin Re		4e-15
3qyw_A	364	Crystal Structure Of Erk2 In Complex With An Inhibi		4e-15
3r63_A	358	Structure Of Erk2 (Spe) Mutant (S246e) Length = 358		4e-15
2z7l_A	366	Unphosphorylated Mitogen Activated Protein Kinase E		4e-15
3c9w_A	357	Crystal Structure Of Erk-2 With Hypothemycin Covale		4e-15
2fys_B	364	Crystal Structure Of Erk2 Complex With Kim Peptide		4e-15
3o71_A	358	Crystal Structure Of Erk2DCC PEPTIDE COMPLEX Length		4e-15
4gsb_A	364	Monoclinic Crystal Form Of The Apo-Erk2 Length = 36		4e-15
4aw5_A	291	Complex Of The Ephb4 Kinase Domain With An Oxindole		4e-15
2y9q_A	362	Crystal Structure Of Human Erk2 Complexed With A Ma		5e-15
4eqm_A	294	Structural Analysis Of Staphylococcus Aureus Serine		5e-15
1wzy_A	368	Crystal Structure Of Human Erk2 Complexed With A Py		5e-15
1tvo_A	368	The Structure Of Erk2 In Complex With A Small Molec		5e-15
1g8w_A	233	Improved Structure Of Phytohemagglutinin-L From The		5e-15
2ojg_A	380	Crystal Structure Of Erk2 In Complex With N,n-dimet		5e-15
2gph_A	364	Docking Motif Interactions In The Map Kinase Erk2 L		6e-15
3ocs_A	271	Crystal Structure Of Bruton's Tyrosine Kinase In Co		8e-15
1k2p_A	263	Crystal Structure Of Bruton's Tyrosine Kinase Domai		8e-15
1gol_A	364	Coordinates Of Rat Map Kinase Erk2 With An Arginine		8e-15
1ua2_A	346	Crystal Structure Of Human Cdk7 Length = 346		9e-15
3p08_A	267	Crystal Structure Of The Human Btk Kinase Domain Le		9e-15
3gen_A	283	The 1.6 A Crystal Structure Of Human Bruton's Tyros		1e-14
3pix_A	274	Crystal Structure Of Btk Kinase Domain Complexed Wi		1e-14
1v0o_A	288	Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulpho		1e-14
1v0b_A	288	Crystal Structure Of The T198a Mutant Of Pfpk5 Leng		1e-14
2dq7_X	283	Crystal Structure Of Fyn Kinase Domain Complexed Wi		1e-14
3oct_A	265	Crystal Structure Of Bruton's Tyrosine Kinase Mutan		1e-14
3k54_A	283	Structures Of Human Bruton's Tyrosine Kinase In Act		1e-14
3i5n_A	309	Crystal Structure Of C-Met With Triazolopyridazine		2e-14
1ob3_A	288	Structure Of P. Falciparum Pfpk5 Length = 288		2e-14
3q6w_A	307	Structure Of Dually-phosphorylated Met Receptor Kin		2e-14
3q6u_A	308	Structure Of The Apo Met Receptor Kinase In The Dua		2e-14
3mi9_A	351	Crystal Structure Of Hiv-1 Tat Complexed With Human		2e-14
4gg5_A	319	Crystal Structure Of Cmet In Complex With Novel Inh		2e-14
3zuv_A	364	Crystal Structure Of A Designed Selected Ankyrin Re		2e-14
2erk_A	365	Phosphorylated Map Kinase Erk2 Length = 365		2e-14
4ec8_A	373	Structure Of Full Length Cdk9 In Complex With Cycli		2e-14
3lq8_A	302	Structure Of The Kinase Domain Of C-Met Bound To Xl		2e-14
2rfn_A	310	X-ray Structure Of C-met With Inhibitor. Length = 3		2e-14
3f66_A	298	Human C-Met Kinase In Complex With Quinoxaline Inhi		2e-14
2wd1_A	292	Human C-Met Kinase In Complex With Azaindole Inhibi		2e-14
3blh_A	331	Crystal Structure Of Human Cdk9CYCLINT1 Length = 33		2e-14
2wgj_A	306	X-Ray Structure Of Pf-02341066 Bound To The Kinase		3e-14
3omv_A	307	Crystal Structure Of C-Raf (Raf-1) Length = 307		3e-14
2g15_A	318	Structural Characterization Of Autoinhibited C-Met		3e-14
3tei_A	362	Crystal Structure Of Human Erk2 Complexed With A Ma		3e-14
3mn3_A	271	An Inhibited Conformation For The Protein Kinase Do		3e-14
3a4o_X	286	Lyn Kinase Domain Length = 286		3e-14
2fh9_A	274	Structure And Dimerization Of The Kinase Domain Fro		4e-14
2xa4_A	298	Inhibitors Of Jak2 Kinase Domain Length = 298		4e-14
3e62_A	293	Fragment Based Discovery Of Jak-2 Inhibitors Length		4e-14
3hyh_A	275	Crystal Structure Of The Protein Kinase Domain Of Y		4e-14
3rvg_A	303	Crystals Structure Of Jak2 With A 1-Amino-5h-Pyrido		4e-14
2y94_A	476	Structure Of An Active Form Of Mammalian Ampk Lengt		4e-14
3dae_A	283	Crystal Structure Of Phosphorylated Snf1 Kinase Dom		4e-14
2w1i_A	326	Structure Determination Of Aurora Kinase In Complex		4e-14
2hk5_A	270	Hck Kinase In Complex With Lck Targetted Inhibitor		4e-14
2b7a_A	293	The Structural Basis Of Janus Kinase 2 Inhibition B		4e-14
3ipv_B	239	Crystal Structure Of Spatholobus Parviflorus Seed L		4e-14
3s95_A	310	Crystal Structure Of The Human Limk1 Kinase Domain		4e-14
1r0p_A	312	Crystal Structure Of The Tyrosine Kinase Domain Of		5e-14
3cth_A	314	Crystal Structure Of The Tyrosine Kinase Domain Of		5e-14
3q32_A	301	Structure Of Janus Kinase 2 With A Pyrrolotriazine		5e-14
4hge_A	300	Jak2 Kinase (Jh1 Domain) In Complex With Compound 8		5e-14
3orx_A	316	Pdk1 Mutant Bound To Allosteric Disulfide Fragment		5e-14
4aqc_A	301	Triazolopyridine-Based Inhibitor Of Janus Kinase 2		5e-14
4h3q_A	362	Crystal Structure Of Human Erk2 Complexed With A Ma		5e-14
3lpb_A	295	Crystal Structure Of Jak2 Complexed With A Potent 2		5e-14
3a4p_A	319	Human C-Met Kinase Domain Complexed With 6-Benzylox		5e-14
3qti_A	314	C-Met Kinase In Complex With Nvp-Bvu972 Length = 31		5e-14
3tjc_A	298	Co-Crystal Structure Of Jak2 With Thienopyridine 8		5e-14
4e4m_A	302	Jak2 Kinase (Jh1 Domain) In Complex With Compound 3		5e-14
3dkc_A	317	Sgx Clone 5698a65kfg1h1 Length = 317		6e-14
3jy9_A	311	Janus Kinase 2 Inhibitors Length = 311		6e-14
3c1x_A	373	Crystal Structure Of The Tyrosine Kinase Domain Of		6e-14
3dkg_A	317	Sgx Clone 5698a109kfg1h1 Length = 317		6e-14
3ipv_A	251	Crystal Structure Of Spatholobus Parviflorus Seed L		6e-14
3io7_A	313	2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Sel		7e-14
4bcf_A	331	Structure Of Cdk9 In Complex With Cyclin T And A 2-		7e-14
2bqp_A	234	The Structure Of The Pea Lectin-D-Glucopyranose Com		8e-14
4e6d_A	298	Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex W		9e-14
4asz_A	299	Crystal Structure Of Apo Trkb Kinase Domain Length		9e-14
1qcf_A	454	Crystal Structure Of Hck In Complex With A Src Fami		9e-14
2pk9_A	317	Structure Of The Pho85-pho80 Cdk-cyclin Complex Of		1e-13
3c4c_A	280	B-Raf Kinase In Complex With Plx4720 Length = 280		1e-13
1h4l_A	292	Structure And Regulation Of The Cdk5-P25(Nck5a) Com		1e-13
3ugc_A	295	Structural Basis Of Jak2 Inhibition By The Type Ii		1e-13
4fk3_A	292	B-Raf Kinase V600e Oncogenic Mutant In Complex With		1e-13
3niz_A	311	Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5		1e-13
1luf_A	343	Crystal Structure Of The Musk Tyrosine Kinase: Insi		1e-13
2qkr_A	313	Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5		1e-13
3mtl_A	324	Crystal Structure Of The Pctaire1 Kinase In Complex		2e-13
2sba_A	253	Soybean Agglutinin Complexed With 2,6-Pentasacchari		2e-13
2ptk_A	453	Chicken Src Tyrosine Kinase Length = 453		2e-13
2h6d_A	276	Protein Kinase Domain Of The Human 5'-Amp-Activated		2e-13
3dk3_A	293	Crystal Structure Of Mutant Abl Kinase Domain In Co		2e-13
1pme_A	380	Structure Of Penta Mutant Human Erk2 Map Kinase Com		2e-13
3dk6_A	293	Crystal Structure Of Mutant Abl Kinase Domain In Co		3e-13
4bbe_A	298	Aminoalkylpyrimidine Inhibitor Complexes With Jak2		3e-13
2bdf_A	279	Src Kinase In Complex With Inhibitor Ap23451 Length		3e-13
3d7u_B	277	Structural Basis For The Recognition Of C-Src By It		3e-13
1yi6_A	276	C-Term Tail Segment Of Human Tyrosine Kinase (258-5		3e-13
3u4w_A	275	Src In Complex With Dna-Templated Macrocyclic Inhib		3e-13
3pwy_A	311	Crystal Structure Of An Extender (Spd28345)-Modifie		3e-13
3g6h_A	286	Src Thr338ile Inhibited In The Dfg-Asp-Out Conforma		3e-13
3dqw_A	286	C-Src Kinase Domain Thr338ile Mutant In Complex Wit		3e-13
1y57_A	452	Structure Of Unphosphorylated C-Src In Complex With		3e-13
1fmk_A	452	Crystal Structure Of Human Tyrosine-Protein Kinase		3e-13
3oy3_A	284	Crystal Structure Of Abl T315i Mutant Kinase Domain		3e-13
3oxz_A	284	Crystal Structure Of Abl Kinase Domain Bound With A		3e-13
3svv_A	286	Crystal Structure Of T338c C-Src Covalently Bound T		3e-13
3og7_A	289	B-Raf Kinase V600e Oncogenic Mutant In Complex With		4e-13
2oiq_A	286	Crystal Structure Of Chicken C-Src Kinase Domain In		4e-13
2z60_A	288	Crystal Structure Of The T315i Mutant Of Abl Kinase		4e-13
1yol_A	283	Crystal Structure Of Src Kinase Domain In Complex W		4e-13
2qoh_A	288	Crystal Structure Of Abl Kinase Bound With Ppy-a Le		4e-13
1fpu_A	293	Crystal Structure Of Abl Kinase Domain In Complex W		4e-13
2h8h_A	535	Src Kinase In Complex With A Quinazoline Inhibitor		5e-13
3dk7_A	277	Crystal Structure Of Mutant Abl Kinase Domain In Co		5e-13
2f4j_A	287	Structure Of The Kinase Domain Of An Imatinib-Resis		5e-13
2g2f_A	287	A Src-Like Inactive Conformation In The Abl Tyrosin		5e-13
3pyy_A	298	Discovery And Characterization Of A Cell-Permeable,		6e-13
1ksw_A	452	Structure Of Human C-Src Tyrosine Kinase (Thr338gly		6e-13
2v7a_A	286	Crystal Structure Of The T315i Abl Mutant In Comple		6e-13
2r0i_A	327	Crystal Structure Of A Kinase Mark2PAR-1 Mutant Len		6e-13
1zmu_A	327	Catalytic And Ubiqutin-Associated Domains Of Mark2P		6e-13
1yoj_A	283	Crystal Structure Of Src Kinase Domain Length = 283		6e-13
1ung_A	292	Structural Mechanism For The Inhibition Of Cdk5-P25		7e-13
4h58_A	275	Braf In Complex With Compound 3 Length = 275		7e-13
1opk_A	495	Structural Basis For The Auto-Inhibition Of C-Abl T		7e-13
3oez_A	286	Crystal Structure Of The L317i Mutant Of The Chicke		7e-13
3nax_A	311	Pdk1 In Complex With Inhibitor Mp7 Length = 311		7e-13
3nay_A	311	Pdk1 In Complex With Inhibitor Mp6 Length = 311		7e-13
3hrc_A	311	Crystal Structure Of A Mutant Of Human Pdk1 Kinase		7e-13
3lxn_A	318	Structural And Thermodynamic Characterization Of Th		8e-13
2hiw_A	287	Crystal Structure Of Inactive Conformation Abl Kina		8e-13
2g1t_A	287	A Src-Like Inactive Conformation In The Abl Tyrosin		8e-13
3q96_A	282	B-Raf Kinase Domain In Complex With A Tetrahydronap		8e-13
2e2b_A	293	Crystal Structure Of The C-Abl Kinase Domain In Com		8e-13
3geq_A	286	Structural Basis For The Chemical Rescue Of Src Kin		8e-13
1uwj_A	276	The Complex Of Mutant V599e B-raf And Bay439006 Len		8e-13
4a07_A	311	Human Pdk1 Kinase Domain In Complex With Allosteric		8e-13
2fb8_A	281	Structure Of The B-Raf Kinase Domain Bound To Sb-59		8e-13
3cok_A	278	Crystal Structure Of Plk4 Kinase Length = 278		9e-13
1uu9_A	286	Structure Of Human Pdk1 Kinase Domain In Complex Wi		9e-13
3iop_A	312	Pdk-1 In Complex With The Inhibitor Compound-8i Len		9e-13
2qq7_A	286	Crystal Structure Of Drug Resistant Src Kinase Doma		9e-13
4dbn_A	284	Crystal Structure Of The Kinase Domain Of Human B-R		9e-13
2r7b_A	312	Crystal Structure Of The Phosphoinositide-Dependent		9e-13
1h1w_A	289	High Resolution Crystal Structure Of The Human Pdk1		9e-13
3qc4_A	314	Pdk1 In Complex With Dfg-Out Inhibitor Xxx Length =		9e-13
2zv7_A	279	Lyn Tyrosine Kinase Domain, Apo Form Length = 279		9e-13
1uu3_A	310	Structure Of Human Pdk1 Kinase Domain In Complex Wi		9e-13
2xch_A	309	Crystal Structure Of Pdk1 In Complex With A Pyrazol		9e-13
1z5m_A	286	Crystal Structure Of N1-[3-[[5-bromo-2-[[3-[(1-pyrr		9e-13
3rwp_A	311	Discovery Of A Novel, Potent And Selective Inhibito		9e-13
2yza_A	276	Crystal Structure Of Kinase Domain Of Human 5'-Amp-		9e-13
3sc1_A	311	Novel Isoquinolone Pdk1 Inhibitors Discovered Throu		9e-13
2xck_A	309	Crystal Structure Of Pdk1 In Complex With A Pyrazol		9e-13
3iec_A	319	Helicobacter Pylori Caga Inhibits Par1MARK FAMILY K		1e-12
3h9o_A	311	Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1)		1e-12
2hwo_A	286	Crystal Structure Of Src Kinase Domain In Complex W		1e-12
3nun_A	292	Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lea		1e-12
3nus_A	286	Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fra		1e-12
2biy_A	310	Structure Of Pdk1-S241a Mutant Kinase Domain Length		1e-12
3nyx_A	302	Non-Phosphorylated Tyk2 Jh1 Domain With Quinoline-T		1e-12
1avb_A	226	Arcelin-1 From Phaseolus Vulgaris L Length = 226		1e-12
3nz0_A	302	Non-Phosphorylated Tyk2 Kinase With Cmp6 Length = 3		1e-12
1zmv_A	327	Catalytic And Ubiqutin-Associated Domains Of Mark2P		1e-12
3idp_A	300	B-Raf V600e Kinase Domain In Complex With An Aminoi		1e-12
3zvx_A	261	Structure Of The Lectin From Platypodium Elegans In		1e-12
3f61_A	311	Crystal Structure Of M. Tuberculosis Pknb Leu33aspV		2e-12
3ii5_A	306	The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimi		2e-12
2w5a_A	279	Human Nek2 Kinase Adp-Bound Length = 279		2e-12
3d4q_A	307	Pyrazole-Based Inhibitors Of B-Raf Kinase Length =		2e-12
4g9r_A	307	B-Raf V600e Kinase Domain Bound To A Type Ii Dihydr		2e-12
1opl_A	537	Structural Basis For The Auto-Inhibition Of C-Abl T		2e-12
3qri_A	277	The Crystal Structure Of Human Abl1 Kinase Domain I		2e-12
3qrj_A	277	The Crystal Structure Of Human Abl1 Kinase Domain T		2e-12
1ad5_A	438	Src Family Kinase Hck-Amp-Pnp Complex Length = 438		2e-12
1uwh_A	276	The Complex Of Wild Type B-Raf And Bay439006 Length		2e-12
2hyy_A	273	Human Abl Kinase Domain In Complex With Imatinib (S		2e-12
2hak_A	328	Catalytic And Ubiqutin-Associated Domains Of Mark1P		2e-12
2fo0_A	495	Organization Of The Sh3-Sh2 Unit In Active And Inac		2e-12
2gqg_A	278	X-Ray Crystal Structure Of Dasatinib (Bms-354825) B		2e-12
3gqi_A	326	Crystal Structure Of Activated Receptor Tyrosine Ki		2e-12
2hz0_A	270	Abl Kinase Domain In Complex With Nvp-Aeg082 Length		3e-12
3orm_A	311	Mycobacterium Tuberculosis Pknb Kinase Domain D76a		3e-12
3f69_A	311	Crystal Structure Of The Mycobacterium Tuberculosis		3e-12
2hzi_A	277	Abl Kinase Domain In Complex With Pd180970 Length =		3e-12
3tt0_A	382	Co-Structure Of Fibroblast Growth Factor Receptor 1		3e-12
4fg8_A	315	Crystal Structure Of Human Calcium/calmodulin-depen		3e-12
4fg7_A	293	Crystal Structure Of Human Calcium/calmodulin-depen		3e-12
4fg9_A	320	Crystal Structure Of Human Calcium/calmodulin-depen		3e-12
1zmw_A	327	Catalytic And Ubiqutin-Associated Domains Of Mark2P		4e-12
4e4l_A	302	Jak1 Kinase (Jh1 Domain) In Complex With Compound 3		4e-12
4e1z_A	291	Structure Of Mouse Tyk-2 Complexed To A 3-Aminoinda		4e-12
2jc6_A	334	Crystal Structure Of Human Calmodulin-Dependent Pro		4e-12
3eyg_A	290	Crystal Structures Of Jak1 And Jak2 Inhibitor Compl		4e-12
4e20_A	290	Structure Of Mouse Tyk-2 Complexed To A 3-Aminoinda		4e-12
2wzj_A	327	Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82		4e-12
1mru_A	311	Intracellular SerTHR PROTEIN KINASE DOMAIN OF Mycob		4e-12
3ori_A	311	Mycobacterium Tuberculosis Pknb Kinase Domain L33d		4e-12
2y4i_C	395	Ksr2-Mek1 Heterodimer Length = 395		4e-12
3gql_A	326	Crystal Structure Of Activated Receptor Tyrosine Ki		4e-12
3a8w_A	345	Crystal Structure Of Pkciota Kinase Domain Length =		4e-12
4hvd_A	314	Jak3 Kinase Domain In Complex With 2-cyclopropyl-5h		5e-12
3pjc_A	315	Crystal Structure Of Jak3 Complexed With A Potent A		5e-12
3zh8_A	349	A Novel Small Molecule Apkc Inhibitor Length = 349		5e-12
3c4f_A	302	Fgfr Tyrosine Kinase Domain In Complex With 3-(3- M		5e-12
3lxk_A	327	Structural And Thermodynamic Characterization Of Th		5e-12
2jav_A	279	Human Kinase With Pyrrole-Indolinone Ligand Length		5e-12
3kxx_A	317	Structure Of The Mutant Fibroblast Growth Factor Re		5e-12
4a4x_A	279	Nek2-Ede Bound To Cct248662 Length = 279		5e-12
3cd3_A	377	Crystal Structure Of Phosphorylated Human Feline Sa		5e-12
2p55_A	333	X-Ray Structure Of The Human Mitogen-Activated Prot		6e-12
1o6y_A	299	Catalytic Domain Of Pknb Kinase From Mycobacterium		6e-12
1fgk_A	310	Crystal Structure Of The Tyrosine Kinase Domain Of		6e-12
1s9j_A	341	X-Ray Structure Of The Human Mitogen-Activated Prot		6e-12
2qnj_A	328	Kinase And Ubiquitin-Associated Domains Of Mark3PAR		6e-12
3bkb_A	377	Crystal Structure Of Human Feline Sarcoma Viral Onc		6e-12
4dc2_A	396	Structure Of Pkc In Complex With A Substrate Peptid		6e-12
3rhx_B	306	Crystal Structure Of The Catalytic Domain Of Fgfr1		6e-12
3js2_A	317	Crystal Structure Of Minimal Kinase Domain Of Fibro		6e-12
1yvj_A	290	Crystal Structure Of The Jak3 Kinase Domain In Comp		6e-12
1zrz_A	364	Crystal Structure Of The Catalytic Domain Of Atypic		7e-12
4f63_A	309	Crystal Structure Of Human Fibroblast Growth Factor		7e-12
2a19_B	284	Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex. Leng		7e-12
3mbl_A	328	Crystal Structure Of The Human Mitogen-Activated Pr		7e-12
3dv3_A	322	Mek1 With Pf-04622664 Bound Length = 322		7e-12
1qnw_A	242	Lectin Ii From Ulex Europaeus Length = 242		8e-12
3eqc_A	360	X-Ray Structure Of The Human Mitogen-Activated Prot		8e-12
1dbn_A	239	Maackia Amurensis Leukoagglutinin (Lectin) With Sia		1e-11
3v5q_A	297	Discovery Of A Selective Trk Inhibitor With Efficac		1e-11
3h4j_B	336	Crystal Structure Of Pombe Ampk Kdaid Fragment Leng		1e-11
2z7q_A	321	Crystal Structure Of The N-Terminal Kinase Domain O		1e-11
1a06_A	332	Calmodulin-Dependent Protein Kinase From Rat Length		1e-11
1zy4_A	303	Crystal Structure Of Eif2alpha Protein Kinase Gcn2:		1e-11
3ma6_A	298	Crystal Structure Of Kinase Domain Of Tgcdpk1 In Pr		1e-11
3ggf_A	301	Crystal Structure Of Human SerineTHREONINE-Protein		1e-11
1loa_A	181	Three-Dimensional Structures Of Complexes Of Lathyr		1e-11
3uiu_A	306	Crystal Structure Of Apo-Pkr Kinase Domain Length =		1e-11
1i44_A	306	Crystallographic Studies Of An Activation Loop Muta		1e-11
1lof_C	181	X-Ray Structure Of A Biantennary Octasaccharide-Lec		1e-11
2acx_A	576	Crystal Structure Of G Protein Coupled Receptor Kin		1e-11
3tub_A	293	Crystal Structure Of Syk Kinase Domain With 1-(5-(6		1e-11
3vf8_A	299	Crystal Structure Of Spleen Tyrosine Kinase Syk Cat		1e-11
3q4t_A	322	Crystal Structure Of Activin Receptor Type-Iia (Acv		1e-11
2y7j_A	365	Structure Of Human Phosphorylase Kinase, Gamma 2 Le		1e-11
3nyn_A	576	Crystal Structure Of G Protein-Coupled Receptor Kin		1e-11
3fe3_A	328	Crystal Structure Of The Kinase Mark3PAR-1: T211a-S		1e-11
1lgb_A	181	Interaction Of A Legume Lectin With The N2 Fragment		2e-11
1lgc_A	181	Interaction Of A Legume Lectin With The N2 Fragment		2e-11
3cqu_A	342	Crystal Structure Of Akt-1 Complexed With Substrate		2e-11
3ocb_A	341	Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor		2e-11
3srv_A	277	Crystal Structure Of Spleen Tyrosine Kinase (Syk) I		2e-11
1fot_A	318	Structure Of The Unliganded Camp-Dependent Protein		2e-11
4gt5_A	306	Crystal Structure Of The Inactive Trka Kinase Domai		2e-11
3emg_A	291	Discovery And Sar Of Novel 4-Thiazolyl-2- Phenylami		2e-11
1irk_A	306	Crystal Structure Of The Tyrosine Kinase Domain Of		2e-11
4gv1_A	340	Pkb Alpha In Complex With Azd5363 Length = 340		2e-11
4f0f_A	287	Crystal Structure Of The Roco4 Kinase Domain Bound		2e-11
4f0i_A	300	Crystal Structure Of Apo Trka Length = 300		2e-11
3i79_A	484	Calcium-Dependent Protein Kinase 1 From Toxoplasma		2e-11
3o96_A	446	Crystal Structure Of Human Akt1 With An Allosteric		2e-11
4aoj_A	329	Human Trka In Complex With The Inhibitor Az-23 Leng		2e-11
4ejn_A	446	Crystal Structure Of Autoinhibited Form Of Akt1 In		2e-11
3srv_B	277	Crystal Structure Of Spleen Tyrosine Kinase (Syk) I		2e-11
3txo_A	353	Pkc Eta Kinase In Complex With A Naphthyridine Leng		2e-11
2v5q_A	315	Crystal Structure Of Wild-type Plk-1 Kinase Domain		2e-11
1xba_A	291	Crystal Structure Of Apo Syk Tyrosine Kinase Domain		2e-11
2b7y_A	182	Fava Bean Lectin-Glucose Complex Length = 182		2e-11
4fl3_A	635	Structural And Biophysical Characterization Of The		2e-11
2yac_A	311	Crystal Structure Of Polo-Like Kinase 1 In Complex		2e-11
3gvu_A	292	The Crystal Structure Of Human Abl2 In Complex With		2e-11
3kb7_A	311	Crystal Structure Of Polo-Like Kinase 1 In Complex		2e-11
4dfl_A	274	Crystal Structure Of Spleen Tyrosine Kinase Complex		3e-11
4fl2_A	636	Structural And Biophysical Characterization Of The		3e-11
1f3m_C	297	Crystal Structure Of Human SerineTHREONINE KINASE P		3e-11
3ckw_A	304	Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3		3e-11
4f4p_A	273	Syk In Complex With Ligand Lasw836 Length = 273		3e-11
3orn_A	307	Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In		3e-11
1n3o_A	252	Pterocarcpus Angolensis Lectin In Complex With Alph		3e-11
1q8o_A	252	Pterocartpus Angolensis Lectin Pal In Complex With		3e-11
2oo8_X	317	Synthesis, Structural Analysis, And Sar Studies Of		3e-11
3g51_A	325	Structural Diversity Of The Active Conformation Of		3e-11
1fvr_A	327	Tie2 Kinase Domain Length = 327		3e-11
3n35_A	242	Erythrina Corallodendron Lectin Mutant (Y106g) With		3e-11
3zhp_C	294	Human Mst3 (stk24) In Complex With Mo25beta Length		3e-11
3sls_A	304	Crystal Structure Of Human Mek-1 Kinase In Complex		3e-11
1u59_A	287	Crystal Structure Of The Zap-70 Kinase Domain In Co		4e-11
1ir3_A	306	Phosphorylated Insulin Receptor Tyrosine Kinase In		4e-11
3ku2_A	507	Crystal Structure Of Inactivated Form Of Cdpk1 From		4e-11
3hx4_A	508	Crystal Structure Of Cdpk1 Of Toxoplasma Gondii, Tg		4e-11
2pzr_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		4e-11
2pvf_A	334	Crystal Structure Of Tyrosine Phosphorylated Activa		4e-11
2jed_A	352	The Crystal Structure Of The Kinase Domain Of The P		4e-11
3eta_A	317	Kinase Domain Of Insulin Receptor Complexed With A		4e-11
1yhv_A	297	Crystal Structure Of Pak1 Kinase Domain With Two Po		4e-11
3com_A	314	Crystal Structure Of Mst1 Kinase Length = 314		5e-11
2pml_X	348	Crystal Structure Of Pfpk7 In Complex With An Atp A		5e-11
1sfy_A	239	Crystal Structure Of Recombinant Erythrina Corallod		5e-11
2lal_A	181	Crystal Structure Determination And Refinement At 2		5e-11
3cly_A	334	Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase		5e-11
1xjd_A	345	Crystal Structure Of Pkc-Theta Complexed With Staur		5e-11
4b99_A	398	Crystal Structure Of Mapk7 (Erk5) With Inhibitor Le		5e-11
3fxz_A	297	Crystal Structure Of Pak1 Kinase Domain With Ruthen		5e-11
2z8c_A	303	Phosphorylated Insulin Receptor Tyrosine Kinase In		5e-11
2jdo_A	342	Structure Of Pkb-Beta (Akt2) Complexed With Isoquin		5e-11
3q52_A	306	Structure Of Phosphorylated Pak1 Kinase Domain Leng		5e-11
1o6l_A	337	Crystal Structure Of An Activated Akt/protein Kinas		6e-11
3d5u_A	317	Crystal Structure Of A Wildtype Polo-Like Kinase 1		6e-11
3e87_A	335	Crystal Structures Of The Kinase Domain Of Akt2 In		6e-11
2jam_A	304	Crystal Structure Of Human Calmodulin-Dependent Pro		6e-11
3c4x_A	543	Crystal Structure Of G Protein Coupled Receptor Kin		6e-11
3c4w_A	543	Crystal Structure Of G Protein Coupled Receptor Kin		6e-11
2pvy_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		6e-11
4el9_A	305	Structure Of N-Terminal Kinase Domain Of Rsk2 With		6e-11
3ubd_A	304	Structure Of N-Terminal Domain Of Rsk2 Kinase In Co		6e-11
1o6k_A	336	Structure Of Activated Form Of Pkb Kinase Domain S4		6e-11
3t8o_A	543	Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolu		6e-11
3i7c_A	484	Calcium-Dependent Protein Kinase 1 From Toxoplasma		7e-11
1gzn_A	335	Structure Of Pkb Kinase Domain Length = 335		7e-11
2ozo_A	613	Autoinhibited Intact Human Zap-70 Length = 613		7e-11
1zyc_A	303	Crystal Structure Of Eif2alpha Protein Kinase Gcn2:		7e-11
1gzk_A	315	Molecular Mechanism For The Regulation Of Protein K		7e-11
1mrv_A	339	Crystal Structure Of An Inactive Akt2 Kinase Domain		7e-11
4ic7_A	442	Crystal Structure Of The Erk5 Kinase Domain In Comp		8e-11
3qc9_A	543	Crystal Structure Of Cross-Linked Bovine Grk1 T8cN4		8e-11
3b2t_A	311	Structure Of Phosphotransferase Length = 311		8e-11
1pf8_A	298	Crystal Structure Of Human Cyclin-dependent Kinase		8e-11
4f1o_A	287	Crystal Structure Of The L1180t Mutant Roco4 Kinase		8e-11
3ri1_A	313	Crystal Structure Of The Catalytic Domain Of Fgfr2		8e-11
1rqq_A	306	Crystal Structure Of The Insulin Receptor Kinase In		8e-11
3pxf_A	306	Cdk2 In Complex With Two Molecules Of 8-Anilino-1-N		8e-11
3thb_A	333	Structure Of Plk1 Kinase Domain In Complex With A B		9e-11
4f1m_A	287	Crystal Structure Of The G1179s Roco4 Kinase Domain		9e-11
3iw4_A	360	Crystal Structure Of Pkc Alpha In Complex With Nvp-		9e-11
2w17_A	299	Cdk2 In Complex With The Imidazole Pyrimidine Amide		9e-11
4erw_A	306	Cdk2 In Complex With Staurosporine Length = 306		9e-11
2ou7_A	335	Structure Of The Catalytic Domain Of Human Polo-Lik		9e-11
1fin_A	298	Cyclin A-Cyclin-Dependent Kinase 2 Complex Length =		9e-11
1s9i_A	354	X-Ray Structure Of The Human Mitogen-Activated Prot		9e-11
2psq_A	370	Crystal Structure Of Unphosphorylated Unactivated W		9e-11
1gz8_A	299	Human Cyclin Dependent Kinase 2 Complexed With The		9e-11
2ltn_A	181	Design, Expression, And Crystallization Of Recombin		9e-11
3q4z_A	306	Structure Of Unphosphorylated Pak1 Kinase Domain Le		9e-11
1gjo_A	316	The Fgfr2 Tyrosine Kinase Domain Length = 316		9e-11
2rku_A	294	Structure Of Plk1 In Complex With Bi2536 Length = 2		1e-10
2pel_A	236	Peanut Lectin Length = 236		1e-10
2pzp_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		1e-10
1ofs_A	187	Pea Lectin-sucrose Complex Length = 187		1e-10
3ezr_A	300	Cdk-2 With Indazole Inhibitor 17 Bound At Its Activ		1e-10
2xik_A	294	Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related K		1e-10
3pj8_A	299	Structure Of Cdk2 In Complex With A Pyrazolo[4,3-D]		1e-10
1bzw_A	232	Peanut Lectin Complexed With C-Lactose Length = 232		1e-10
3mfr_A	351	Cask-4m Cam Kinase Domain, Native Length = 351		1e-10
1vyw_A	309	Structure Of Cdk2CYCLIN A WITH PNU-292137 Length =		1e-10
3ckx_A	304	Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3		1e-10
2c30_A	321	Crystal Structure Of The Human P21-Activated Kinase		1e-10
1ax0_A	239	Erythrina Corallodendron Lectin In Complex With N-A		1e-10
3a7f_A	303	Human Mst3 Kinase Length = 303		1e-10
1p14_A	306	Crystal Structure Of A Catalytic-Loop Mutant Of The		1e-10
1rin_A	180	X-Ray Crystal Structure Of A Pea Lectin-Trimannosid		1e-10
1oit_A	299	Imidazopyridines: A Potent And Selective Class Of C		1e-10
2pz5_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		1e-10
3ekk_A	307	Insulin Receptor Kinase Complexed With An Inhibitor		1e-10
1y8g_A	327	Catalytic And Ubiqutin-Associated Domains Of Mark2P		1e-10
2wqb_A	324	Structure Of The Tie2 Kinase Domain In Complex With		1e-10
1lte_A	239	Structure Of A Legume Lectin With An Ordered N-Link		1e-10
2pwl_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		2e-10
1oir_A	299	Imidazopyridines: A Potent And Selective Class Of C		2e-10
1h01_A	298	Cdk2 In Complex With A Disubstituted 2, 4-Bis Anili		2e-10
3lm0_A	327	Crystal Structure Of Human SerineTHREONINE KINASE 1		2e-10
3d5w_A	317	Crystal Structure Of A Phosphorylated Polo-Like Kin		2e-10
2q0b_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		2e-10
2vwi_A	303	Structure Of The Osr1 Kinase, A Hypertension Drug T		2e-10
1fyu_A	255	Crystal Structure Of Erythrina Corallodendron Lecti		2e-10
2x4f_A	373	The Crystal Structure Of The Human Myosin Light Cha		2e-10
1zxe_A	303	Crystal Structure Of Eif2alpha Protein Kinase Gcn2:		2e-10
3dak_A	290	Crystal Structure Of Domain-Swapped Osr1 Kinase Dom		2e-10
3d5v_A	317	Crystal Structure Of An Activated (Thr->asp) Polo-L		2e-10
2py3_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		3e-10
4an2_A	301	Crystal Structures Of Human Mek1 With Carboxamide-B		3e-10
3db6_A	301	Crystal Structure Of An Activated (Thr->asp) Polo-L		3e-10
1koa_A	491	Twitchin Kinase Fragment (C.Elegans), Autoregulated		3e-10
4i3z_A	296	Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNES		3e-10
1gz9_A	239	High-Resolution Crystal Structure Of Erythrina Cris		3e-10
2f57_A	317	Crystal Structure Of The Human P21-activated Kinase		3e-10
3vw6_A	269	Crystal Structure Of Human Apoptosis Signal-Regulat		3e-10
1e9h_A	297	Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex		3e-10
3uto_A	573	Twitchin Kinase Region From C.Elegans (Fn31-Nl-Kin-		4e-10
3qhr_A	298	Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic		4e-10
4eoq_A	301	Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Co		4e-10
4bcq_A	301	Structure Of Cdk2 In Complex With Cyclin A And A 2-		4e-10
1w98_A	298	The Structural Basis Of Cdk2 Activation By Cyclin E		4e-10
1jst_A	298	Phosphorylated Cyclin-Dependent Kinase-2 Bound To C		4e-10
1qmz_A	299	Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Com		4e-10
4eos_A	300	Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Co		4e-10
3bht_A	300	Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN		4e-10
1b6c_B	342	Crystal Structure Of The Cytoplasmic Domain Of The		4e-10
1ogu_A	302	Structure Of Human Thr160-phospho Cdk2/cyclin A Com		4e-10
4eop_A	300	Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3		4e-10
3my0_A	305	Crystal Structure Of The Acvrl1 (Alk1) Kinase Domai		4e-10
2phk_A	277	The Crystal Structure Of A Phosphorylase Kinase Pep		4e-10
1h1p_A	303	Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMP		5e-10
4eoo_A	299	Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3		5e-10
1rw8_A	301	Crystal Structure Of Tgf-Beta Receptor I Kinase Wit		5e-10
3cjf_A	309	Crystal Structure Of Vegfr2 In Complex With A 3,4,5		5e-10
2jgz_A	289	Crystal Structure Of Phospho-Cdk2 In Complex With C		5e-10
2clq_A	295	Structure Of Mitogen-Activated Protein Kinase Kinas		5e-10
1py5_A	326	Crystal Structure Of Tgf-Beta Receptor I Kinase Wit		5e-10
1phk_A	298	Two Structures Of The Catalytic Domain Of Phosphory		5e-10
4dym_A	301	Crystal Structure Of The Acvr1 Kinase Domain In Com		5e-10
3pls_A	298	Ron In Complex With Ligand Amp-Pnp Length = 298		5e-10
4eom_A	301	Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Hum		5e-10
2i0e_A	353	Structure Of Catalytic Domain Of Human Protein Kina		5e-10
1vjy_A	303	Crystal Structure Of A Naphthyridine Inhibitor Of H		5e-10
3tzm_A	309	Tgf-Beta Receptor Type 1 In Complex With Sb431542 L		6e-10
2wot_A	306	Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)		6e-10
1ql6_A	298	The Catalytic Mechanism Of Phosphorylase Kinase Pro		6e-10
3gbz_A	329	Structure Of The Cmgc Cdk Kinase From Giardia Lambl		6e-10
4eoj_A	302	Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Huma		6e-10
4af3_A	292	Human Aurora B Kinase In Complex With Incenp And Vx		6e-10
2wqm_A	310	Structure Of Apo Human Nek7 Length = 310		6e-10
4eon_A	300	Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Hum		6e-10
1gii_A	298	Human Cyclin Dependent Kinase 2 Complexed With The		6e-10
4fr4_A	384	Crystal Structure Of Human SerineTHREONINE-Protein		6e-10
4eok_A	300	Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Huma		6e-10
4bc6_A	293	Crystal Structure Of Human Serine Threonine Kinase-		6e-10
2uv2_A	287	Crystal Structure Of Human Ste20-Like Kinase Bound		6e-10
2iw8_A	302	Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82		6e-10
1rjb_A	344	Crystal Structure Of Flt3 Length = 344		7e-10
3mtf_A	301	Crystal Structure Of The Acvr1 Kinase In Complex Wi		7e-10
3pfq_A	674	Crystal Structure And Allosteric Activation Of Prot		7e-10
3h9r_A	330	Crystal Structure Of The Kinase Domain Of Type I Ac		7e-10
4aaa_A	331	Crystal Structure Of The Human Cdkl2 Kinase Domain		8e-10
3l9p_A	367	Crystal Structure Of The Anaplastic Lymphoma Kinase		8e-10
3bea_A	333	Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A P		8e-10
2j7t_A	302	Crystal Structure Of Human Serine Threonine Kinase-		8e-10
4eoi_A	299	Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyc		9e-10
3cjg_A	309	Crystal Structure Of Vegfr2 In Complex With A 3,4,5		1e-09
1zys_A	273	Co-Crystal Structure Of Checkpoint Kinase Chk1 With		1e-09
3lct_A	344	Crystal Structure Of The Anaplastic Lymphoma Kinase		1e-09
1uzy_A	242	Erythrina Crystagalli Lectin Length = 242		1e-09
2iw6_A	302	Structure Of Human Thr160-Phospho Cdk2-Cyclin A Com		1e-09
2yjr_A	342	Structure Of F1174l Mutant Anaplastic Lymphoma Kina		1e-09
2e9v_A	268	Structure Of H-Chk1 Complexed With A859017 Length =		1e-09
2ayp_A	269	Crystal Structure Of Chk1 With An Indol Inhibitor L		1e-09
2gcd_A	309	Tao2 Kinase Domain-Staurosporine Structure Length =		1e-09
4fsn_A	278	Crystal Structure Of The Chk1 Length = 278		1e-09
2r0u_A	323	Crystal Structure Of Chek1 In Complex With Inhibito		1e-09
2hog_A	322	Crystal Structure Of Chek1 In Complex With Inhibito		1e-09
2ghg_A	269	H-Chk1 Complexed With A431994 Length = 269		2e-09
3jvr_A	271	Characterization Of The Chk1 Allosteric Inhibitor B		2e-09
2x8e_A	276	Discovery Of A Novel Class Of Triazolones As Checkp		2e-09
2wtw_A	285	Aurora-A Inhibitor Structure (2nd Crystal Form) Len		2e-09
1u5q_A	348	Crystal Structure Of The Tao2 Kinase Domain: Activa		2e-09
3ot3_A	273	X-Ray Crystal Structure Of Compound 22k Bound To Hu		2e-09
2i1m_A	333	Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An		2e-09
4fsm_A	279	Crystal Structure Of The Chk1 Length = 279		2e-09
4fnw_A	327	Crystal Structure Of The Apo F1174l Anaplastic Lymp		2e-09
4fsu_A	279	Crystal Structure Of The Chk1 Length = 279		2e-09
3dfa_A	286	Crystal Structure Of Kinase Domain Of Calcium-depen		2e-09
4ft3_A	279	Crystal Structure Of The Chk1 Length = 279		2e-09
4fsy_A	279	Crystal Structure Of The Chk1 Length = 279		2e-09
4fst_A	269	Crystal Structure Of The Chk1 Length = 269		2e-09
2wei_A	287	Crystal Structure Of The Kinase Domain Of Cryptospo		2e-09
2ogv_A	317	Crystal Structure Of The Autoinhibited Human C-Fms		2e-09
2br1_A	297	Structure-Based Design Of Novel Chk1 Inhibitors: In		2e-09
1ia8_A	289	The 1.7 A Crystal Structure Of Human Cell Cycle Che		2e-09
1zlt_A	295	Crystal Structure Of Chk1 Complexed With A Hymenald		2e-09
4fsw_A	279	Crystal Structure Of The Chk1 Length = 279		2e-09
2xir_A	316	Crystal Structure Of The Vegfr2 Kinase Domain In Co		2e-09
2ydj_A	276	Discovery Of Checkpoint Kinase Inhibitor Azd7762 By		2e-09
1vr2_A	316	Human Vascular Endothelial Growth Factor Receptor 2		2e-09
3zgw_A	347	Crystal Structure Of Maternal Embryonic Leucine Zip		2e-09
4fsz_A	279	Crystal Structure Of The Chk1 Length = 279		2e-09
3vnt_A	318	Crystal Structure Of The Kinase Domain Of Human Veg		2e-09
3c7q_A	316	Structure Of Vegfr2 Kinase Domain In Complex With B		2e-09
2j4z_A	306	Structure Of Aurora-2 In Complex With Pha-680626 Le		2e-09
2xru_A	280	Aurora-A T288e Complexed With Pha-828300 Length = 2		2e-09
4agc_A	353	Crystal Structure Of Vegfr2 (Juxtamembrane And Kina		2e-09
3ewh_A	314	Crystal Structure Of The Vegfr2 Kinase Domain In Co		3e-09
3u6j_A	314	Crystal Structure Of The Vegfr2 Kinase Domain In Co		3e-09
3a60_A	327	Crystal Structure Of Unphosphorylated P70s6k1 (Form		3e-09
3o50_A	267	Crystal Structure Of Benzamide 9 Bound To Auroraa L		3e-09
3lcd_A	329	Inhibitor Bound To A Dfg-In Structure Of The Kinase		3e-09
3e5a_A	268	Crystal Structure Of Aurora A In Complex With Vx-68		3e-09
3igo_A	486	Crystal Structure Of Cryptosporidium Parvum Cdpk1,		3e-09
1muo_A	297	Crystal Structure Of Aurora-2, An Oncogenic Serine-		3e-09
2r5t_A	373	Crystal Structure Of Inactive Serum And Glucocortic		3e-09
2wqe_A	262	Structure Of S155r Aurora-A Somatic Mutant Length =		3e-09
2j50_A	280	Structure Of Aurora-2 In Complex With Pha-739358 Le		3e-09
2oh4_A	316	Crystal Structure Of Vegfr2 With A Benzimidazole-Ur		3e-09
4gt4_A	308	Structure Of Unliganded, Inactive Ror2 Kinase Domai		3e-09
3q5i_A	504	Crystal Structure Of Pbanka_031420 Length = 504		3e-09
2w1d_A	275	Structure Determination Of Aurora Kinase In Complex		3e-09
2p0c_A	313	Catalytic Domain Of The Proto-Oncogene Tyrosine-Pro		4e-09
2yjs_A	342	Structure Of C1156y Mutant Anaplastic Lymphoma Kina		4e-09
2xng_A	283	Structure Of Aurora-A Bound To A Selective Imidazop		4e-09
3qbn_A	281	Structure Of Human Aurora A In Complex With A Diami		4e-09
2yhv_A	342	Structure Of L1196m Mutant Anaplastic Lymphoma Kina		4e-09
2c6d_A	275	Aurora A Kinase Activated Mutant (T287d) In Complex		4e-09
2c6e_A	283	Aurora A Kinase Activated Mutant (T287d) In Complex		4e-09
3zzw_A	289	Crystal Structure Of The Kinase Domain Of Ror2 Leng		4e-09
2x6d_A	285	Aurora-A Bound To An Inhibitor Length = 285		4e-09
2qlu_A	314	Crystal Structure Of Activin Receptor Type Ii Kinas		4e-09
1mq4_A	272	Crystal Structure Of Aurora-A Protein Kinase Length		4e-09
3qup_A	323	Inhibitor Bound Structure Of The Kinase Domain Of T		4e-09
3lau_A	287	Crystal Structure Of Aurora2 Kinase In Complex With		4e-09
3fdn_A	279	Structure-Based Drug Design Of Novel Aurora Kinase		4e-09
4dce_A	333	Crystal Structure Of Human Anaplastic Lymphoma Kina		4e-09
4g31_A	299	Crystal Structure Of Gsk6414 Bound To Perk (R587-R1		4e-09
2xp2_A	327	Structure Of The Human Anaplastic Lymphoma Kinase I		4e-09
2ivs_A	314	Crystal Structure Of Non-Phosphorylated Ret Tyrosin		4e-09
2dwb_A	285	Aurora-A Kinase Complexed With Amppnp Length = 285		5e-09
3aox_A	344	X-Ray Crystal Structure Of Human Anaplastic Lymphom		5e-09
4fnz_A	327	Crystal Structure Of Human Anaplastic Lymphoma Kina		5e-09
2i0v_A	335	C-Fms Tyrosine Kinase In Complex With A Quinolone I		5e-09
2xb7_A	315	Structure Of Human Anaplastic Lymphoma Kinase In Co		5e-09
2yfx_A	327	Structure Of L1196m Mutant Anaplastic Lymphoma Kina		5e-09
2ivt_A	314	Crystal Structure Of Phosphorylated Ret Tyrosine Ki		5e-09
4fob_A	353	Crystal Structure Of Human Anaplastic Lymphoma Kina		5e-09
1ywn_A	316	Vegfr2 In Complex With A Novel 4-amino-furo[2,3-d]p		5e-09
1p4o_A	322	Structure Of Apo Unactivated Igf-1r Kinase Domain A		5e-09
3a62_A	327	Crystal Structure Of Phosphorylated P70s6k1 Length		5e-09
3coh_A	268	Crystal Structure Of Aurora-A In Complex With A Pen		6e-09
2p2i_A	314	Crystal Structure Of The Vegfr2 Kinase Domain In Co		6e-09
2p2h_A	314	Crystal Structure Of The Vegfr2 Kinase Domain In Co		6e-09
3aln_A	327	Crystal Structure Of Human Non-Phosphorylated Mkk4		6e-09
3i6w_A	443	Structure And Activation Mechanism Of The Chk2 Dna-		7e-09
3i6u_A	419	Structure And Activation Mechanism Of The Chk2 Dna-		7e-09
3g2f_A	336	Crystal Structure Of The Kinase Domain Of Bone Morp		7e-09
3lw0_A	304	Igf-1rk In Complex With Ligand Msc1609119a-1 Length		7e-09
2wtv_A	285	Aurora-A Inhibitor Structure Length = 285		7e-09
3c0g_A	351	Cask Cam-kinase Domain- 3'-amp Complex, P1 Form Len		8e-09
1bi8_A	326	Mechanism Of G1 Cyclin Dependent Kinase Inhibition		9e-09
3nup_A	307	Cdk6 (Monomeric) In Complex With Inhibitor Length =		1e-08
3lvp_A	336	Crystal Structure Of Bisphosphorylated Igf1-R Kinas		1e-08
3tac_A	361	Crystal Structure Of The Liprin-AlphaCASK COMPLEX L		1e-08
3d14_A	272	Crystal Structure Of Mouse Aurora A (Asn186->gly, L		1e-08
2xne_A	272	Structure Of Aurora-A Bound To An Imidazopyrazine I		1e-08
1m7n_A	322	Crystal Structure Of Unactivated Apo Insulin-Like G		1e-08
3coi_A	353	Crystal Structure Of P38delta Kinase Length = 353		1e-08
2xk9_A	322	Structural Analysis Of Checkpoint Kinase 2 (Chk2) I		1e-08
3h0y_A	268	Aurora A In Complex With A Bisanilinopyrimidine Len		1e-08
2bmc_A	306	Aurora-2 T287d T288d Complexed With Pha-680632 Leng		1e-08
1ol6_A	282	Structure Of Unphosphorylated D274n Mutant Of Auror		1e-08
1jow_B	308	Crystal Structure Of A Complex Of Human Cdk6 And A		1e-08
4exu_A	371	Mapk13, Inactive Form Length = 371		1e-08
3ha6_A	268	Crystal Structure Of Aurora A In Complex With Tpx2		1e-08
2w0j_A	323	Crystal Structure Of Chk2 In Complex With Nsc 10955		1e-08
2ycr_A	323	Crystal Structure Of Checkpoint Kinase 2 In Complex		1e-08
2ycf_A	322	Crystal Structure Of Checkpoint Kinase 2 In Complex		1e-08
1ol5_A	282	Structure Of Aurora-A 122-403, Phosphorylated On Th		1e-08
3lco_A	324	Inhibitor Bound To A Dfg-Out Structure Of The Kinas		1e-08
2w1c_A	275	Structure Determination Of Aurora Kinase In Complex		1e-08
2cn5_A	329	Crystal Structure Of Human Chk2 In Complex With Adp		1e-08
4fnx_A	327	Crystal Structure Of The Apo R1275q Anaplastic Lymp		1e-08
3i81_A	315	Crystal Structure Of Insulin-Like Growth Factor 1 R		2e-08
1yrp_A	278	Catalytic Domain Of Human Zip Kinase Phosphorylated		2e-08
3bbt_B	328	Crystal Structure Of The Erbb4 Kinase In Complex Wi		2e-08
1omw_A	689	Crystal Structure Of The Complex Between G Protein-		2e-08
3psc_A	695	Bovine Grk2 In Complex With Gbetagamma Subunits Len		2e-08
3o23_A	305	Human Unphosphorylated Igf1-R Kinase Domain In Comp		2e-08
3d94_A	301	Crystal Structure Of The Insulin-Like Growth Factor		2e-08
1jqh_A	308	Igf-1 Receptor Kinase Domain Length = 308		2e-08
2oj9_A	307	Structure Of Igf-1r Kinase Domain Complexed With A		2e-08
3cik_A	689	Human Grk2 In Complex With Gbetagamma Subunits Leng		2e-08
3unz_A	279	Aurora A In Complex With Rpm1679 Length = 279		2e-08
3krw_A	688	Human Grk2 In Complex With Gbetgamma Subunits And B		2e-08
3r21_A	271	Design, Synthesis, And Biological Evaluation Of Pyr		2e-08
3nrm_A	283	Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibito		2e-08
1zws_A	288	Crystal Structure Of The Catalytic Domain Of Human		2e-08
1k3a_A	299	Structure Of The Insulin-Like Growth Factor 1 Recep		2e-08
2jfl_A	325	Crystal Structure Of Human Ste20-Like Kinase ( Diph		2e-08
2bfy_A	284	Complex Of Aurora-B With Incenp And Hesperidin. Len		2e-08
2jfm_A	325	Crystal Structure Of Human Ste20-Like Kinase (Unlig		2e-08
3qqu_A	301	Cocrystal Structure Of Unphosphorylated Igf With Py		2e-08
2ivv_A	314	Crystal Structure Of Phosphorylated Ret Tyrosine Ki		2e-08
2f9g_A	353	Crystal Structure Of Fus3 Phosphorylated On Tyr182		2e-08
2j51_A	325	Crystal Structure Of Human Ste20-Like Kinase Bound		2e-08
2b9f_A	353	Crystal Structure Of Non-Phosphorylated Fus3 Length		2e-08
2bfx_B	284	Mechanism Of Aurora-B Activation By Incenp And Inhi		2e-08
3rgf_A	405	Crystal Structure Of Human Cdk8CYCC Length = 405		2e-08
2zv2_A	298	Crystal Structure Of Human CalciumCALMODULIN-Depend		2e-08
2vrx_A	285	Structure Of Aurora B Kinase In Complex With Zm4474		2e-08
1wmk_A	321	Human Death-Associated Kinase Drp-1, Mutant S308d D		2e-08
2a2a_A	321	High-resolution Crystallographic Analysis Of The Au		2e-08
1kob_A	387	Twitchin Kinase Fragment (Aplysia), Autoregulated P		2e-08
1fay_A	238	Winged Bean Acidic Lectin Complexed With Methyl-Alp		2e-08
2r4b_A	321	Erbb4 Kinase Domain Complexed With A Thienopyrimidi		2e-08
3bhy_A	283	Crystal Structure Of Human Death Associated Protein		3e-08
3dxn_A	287	Crystal Structure Of The Calcium-dependent Kinase F		3e-08
1hql_A	257	The Xenograft Antigen In Complex With The B4 Isolec		3e-08
1z9x_A	321	Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal		3e-08
2a27_A	321	Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal		3e-08
3vum_A	370	Crystal Structure Of A Cysteine-deficient Mutant M7		3e-08
1gnz_A	257	Lectin I-B4 From Griffonia Simplicifolia (Gs I-B4)m		3e-08
1n47_A	233	Isolectin B4 From Vicia Villosa In Complex With The		3e-08
3vul_A	370	Crystal Structure Of A Cysteine-deficient Mutant M1		3e-08
2zm3_A	308	Complex Structure Of Insulin-Like Growth Factor Rec		3e-08
3oz6_A	388	Crystal Structure Of Mapk From Cryptosporidium Parv		3e-08
2vz6_A	313	Structure Of Human Calcium Calmodulin Dependent Pro		5e-08
3daj_A	272	Crystal Structure Of Aurora A Complexed With An Inh		5e-08
4e5a_X	360	The W197a Mutant Of P38a Map Kinase Length = 360		6e-08
2ya9_A	361	Crystal Structure Of The Autoinhibited Form Of Mous		7e-08
3hzt_A	467	Crystal Structure Of Toxoplasma Gondii Cdpk3, Tgme4		7e-08
2wnt_A	330	Crystal Structure Of The Human Ribosomal Protein S6		7e-08
3mdy_A	337	Crystal Structure Of The Cytoplasmic Domain Of The		7e-08
2b9h_A	353	Crystal Structure Of Fus3 With A Docking Motif From		7e-08
2bva_A	292	Crystal Structure Of The Human P21-Activated Kinase		7e-08
1ywr_A	360	Crystal Structure Analysis Of Inactive P38 Kinase D		7e-08
2q0n_A	301	Structure Of Human P21 Activating Kinase 4 (Pak4) I		8e-08
2e7q_A	237	Crystal Structure Of Basic Winged Bean Lectin In Co		8e-08
1yw2_A	360	Mutated Mus Musculus P38 Kinase (Mp38) Length = 360		8e-08
3vui_A	370	Crystal Structure Of A Cysteine-deficient Mutant M2		8e-08
3vug_A	370	Crystal Structure Of A Cysteine-deficient Mutant M2		8e-08
2cdz_A	303	Crystal Structure Of The Human P21-Activated Kinase		8e-08
3qfv_A	415	Mrck Beta In Complex With Tpca-1 Length = 415		8e-08
2x4z_A	296	Crystal Structure Of The Human P21-Activated Kinase		8e-08
3tku_A	433	Mrck Beta In Complex With Fasudil Length = 433		8e-08
2eig_A	234	Lotus Tetragonolobus Seed Lectin (Isoform) Length =		8e-08
2ghl_A	348	Mutant Mus Musculus P38 Kinase Domain In Complex Wi		8e-08
2j90_A	304	Crystal Structure Of Human Zip Kinase In Complex Wi		9e-08
3vuk_A	370	Crystal Structure Of A Cysteine-deficient Mutant M5		9e-08
3vuh_A	370	Crystal Structure Of A Cysteine-deficient Mutant M3		9e-08
2v55_A	406	Mechanism Of Multi-site Phosphorylation From A Rock		9e-08
3v8s_A	410	Human Rho-Associated Protein Kinase 1 (Rock 1) In C		9e-08
2esm_A	415	Crystal Structure Of Rock 1 Bound To Fasudil Length		1e-07
1wbl_A	241	Winged Bean Lectin Complexed With Methyl-Alpha-D-Ga		1e-07
4fie_A	423	Full-Length Human Pak4 Length = 423		1e-07
4fif_A	346	Catalytic Domain Of Human Pak4 With Rpkplvdp Peptid		1e-07
2w4o_A	349	Crystal Structure Of Human Camk4 In Complex With 4-		1e-07
4aw2_A	437	Crystal Structure Of Cdc42 Binding Protein Kinase A		1e-07
1wbf_A	242	Winged Bean Lectin, Saccharide Free Form Length = 2		1e-07
1fny_A	237	Legume Lectin Of The Bark Of Robinia Pseudoacacia.		1e-07
3lmg_A	344	Crystal Structure Of The Erbb3 Kinase Domain In Com		1e-07
2baq_A	365	P38alpha Bound To Ro3201195 Length = 365		1e-07
3bhh_A	295	Crystal Structure Of Human Calcium/calmodulin-depen		1e-07
3nnx_A	354	Crystal Structure Of Phosphorylated P38 Alpha In Co		1e-07
2bal_A	365	P38alpha Map Kinase Bound To Pyrazoloamine Length =		1e-07
3hvc_A	362	Crystal Structure Of Human P38alpha Map Kinase Leng		1e-07
1zzl_A	351	Crystal Structure Of P38 With Triazolopyridine Leng		1e-07
3lij_A	494	Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820)		1e-07
2baj_A	365	P38alpha Bound To Pyrazolourea Length = 365		1e-07
3nnu_A	354	Crystal Structure Of P38 Alpha In Complex With Dp13		1e-07
3hrb_A	359	P38 Kinase Crystal Structure In Complex With Small		1e-07
3zsg_A	362	X-Ray Structure Of P38alpha Bound To Tak-715 Length		1e-07
1di9_A	360	The Structure Of P38 Mitogen-Activated Protein Kina		1e-07
2lgc_A	359	Joint Nmr And X-Ray Refinement Reveals The Structur		1e-07
1ian_A	366	Human P38 Map Kinase Inhibitor Complex Length = 366		1e-07
3oef_X	360	Crystal Structure Of Y323f Inactive Mutant Of P38al		1e-07
1ukh_A	369	Structural Basis For The Selective Inhibition Of Jn		1e-07
2oza_B	366	Structure Of P38alpha Complex Length = 366		1e-07
3hec_A	348	P38 In Complex With Imatinib Length = 348		1e-07
1lew_A	360	Crystal Structure Of Map Kinase P38 Complexed To Th		1e-07
2x7f_A	326	Crystal Structure Of The Kinase Domain Of Human Tra		1e-07
2npq_A	367	A Novel Lipid Binding Site In The P38 Alpha Map Kin		1e-07
3s3i_A	349	P38 Kinase Crystal Structure In Complex With Small		1e-07
3od6_X	360	Crystal Structure Of P38alpha Y323t Active Mutant L		1e-07
3ody_X	360	Crystal Structure Of P38alpha Y323q Active Mutant L		1e-07
3gcu_A	360	Human P38 Map Kinase In Complex With Rl48 Length =		1e-07
3rny_A	346	Crystal Structure Of Human Rsk1 C-Terminal Kinase D		1e-07
3k3i_A	350	P38alpha Bound To Novel Dgf-Out Compound Pf-0021595		1e-07
2j0l_A	276	Crystal Structure Of A The Active Conformation Of T		1e-07
3vud_A	370	Crystal Structure Of A Cysteine-deficient Mutant M1		1e-07
1m7q_A	366	Crystal Structure Of P38 Map Kinase In Complex With		1e-07
3k3j_A	362	P38alpha Bound To Novel Dfg-Out Compound Pf-0041612		1e-07
3e92_A	371	Crystal Structure Of P38 Kinase In Complex With A B		1e-07
2xrw_A	371	Linear Binding Motifs For Jnk And For Calcineurin A		1e-07
3odz_X	360	Crystal Structure Of P38alpha Y323r Active Mutant L		1e-07
3p4k_A	370	The Third Conformation Of P38a Map Kinase Observed		1e-07
2gtm_A	348	Mutated Mouse P38 Map Kinase Domain In Complex With		1e-07
3gu4_A	295	Crystal Structure Of Dapkq23v-Amppnp Length = 295		1e-07
3v3v_A	379	Structural And Functional Analysis Of Quercetagetin		2e-07
2fso_X	367	Mitogen Activated Protein Kinase P38alpha (D176a) A		2e-07
1oz1_A	372	P38 Mitogen-Activated Kinase In Complex With 4-Azai		2e-07
3soa_A	444	Full-Length Human Camkii Length = 444		2e-07
2gfs_A	372	P38 Kinase Crystal Structure In Complex With Ro3201		2e-07
1p4f_A	293	Death Associated Protein Kinase Catalytic Domain Wi		2e-07
3kex_A	325	Crystal Structure Of The Catalytically Inactive Kin		2e-07
3gp0_A	348	Crystal Structure Of Human Mitogen Activated Protei		2e-07
4agu_A	311	Crystal Structure Of The Human Cdkl1 Kinase Domain		2e-07
2fsl_X	367	Mitogen Activated Protein Kinase P38alpha (D176a+f3		2e-07
3kq7_A	380	Structure Of Human P38alpha With N-[4-Methyl-3-(6-{		2e-07
1ove_A	366	The Structure Of P38 Alpha In Complex With A Dihydr		2e-07
3mpt_A	371	Crystal Structure Of P38 Kinase In Complex With A P		2e-07
1bl6_A	379	The Complex Structure Of The Map Kinase P38SB216995		2e-07
3f5u_A	295	Crystal Structure Of The Death Associated Protein K		2e-07
1ig1_A	294	1.8a X-Ray Structure Of Ternary Complex Of A Cataly		2e-07
3tg1_A	380	Crystal Structure Of P38alpha In Complex With A Map		2e-07
2y8o_A	362	Crystal Structure Of Human P38alpha Complexed With		2e-07
3dt1_A	383	P38 Complexed With A Quinazoline Inhibitor Length =		2e-07
3fi4_A	372	P38 Kinase Crystal Structure In Complex With Ro4499		2e-07
2fst_X	367	Mitogen Activated Protein Kinase P38alpha (d176a+f3		2e-07
3oht_A	389	Crystal Structure Of Salmo Salar P38alpha Length =		2e-07
3dfc_B	295	Crystal Structure Of A Glycine-Rich Loop Mutant Of		2e-07
4ebw_A	304	Structure Of Focal Adhesion Kinase Catalytic Domain		2e-07
1bmk_A	379	The Complex Structure Of The Map Kinase P38SB218655		2e-07
2jkm_A	276	Focal Adhesion Kinase Catalytic Domain In Complex W		2e-07
2f2u_A	402	Crystal Structure Of The Rho-Kinase Kinase Domain L		2e-07
3g0f_A	336	Kit Kinase Domain Mutant D816h In Complex With Suni		2e-07
2j0m_B	276	Crystal Structure A Two-Chain Complex Between The F		2e-07
2yak_A	285	Structure Of Death-Associated Protein Kinase 1 (Dap		2e-07
3g33_A	308	Crystal Structure Of Cdk4CYCLIN D3 Length = 308		2e-07
3bz3_A	276	Crystal Structure Analysis Of Focal Adhesion Kinase		2e-07
1wvw_A	278	Crystal Structures Of Kinase Domain Of Dap Kinase I		2e-07
2w99_B	306	Crystal Structure Of Cdk4 In Complex With A D-Type		2e-07
2puu_A	348	Crystal Structure Of P38 Complex With 1-(5-Tert-But		2e-07
2w4j_A	277	X-Ray Structure Of A Dap-Kinase 2-277 Length = 277		2e-07
2j0j_A	656	Crystal Structure Of A Fragment Of Focal Adhesion K		2e-07
2gnj_A	350	Pka Three Fold Mutant Model Of Rho-Kinase With Y-27		2e-07
2etm_A	281	Crystal Structure Of Focal Adhesion Kinase Domain C		2e-07
2gnf_A	350	Protein Kinase A Fivefold Mutant Model Of Rho-Kinas		2e-07
2jkk_A	276	Focal Adhesion Kinase Catalytic Domain In Complex W		2e-07
2gng_A	350	Protein Kinase A Fivefold Mutant Model Of Rho-Kinas		2e-07
3ama_A	351	Protein Kinase A Sixfold Mutant Model Of Aurora B W		2e-07
1mp8_A	281	Crystal Structure Of Focal Adhesion Kinase (Fak) Le		3e-07
3fhr_A	336	High Resolution Crystal Structure Of Mitogen-Activa		3e-07
1xh9_A	350	Crystal Structures Of Protein Kinase B Selective In		3e-07
3pxk_A	282	Focal Adhesion Kinase Catalytic Domain In Complex W		3e-07
2w96_B	306	Crystal Structure Of Cdk4 In Complex With A D-Type		3e-07
3r1n_A	317	Mk3 Kinase Bound To Compound 5b Length = 317		3e-07
2j0k_A	656	Crystal Structure Of A Fragment Of Focal Adhesion K		3e-07
2xuu_A	334	Crystal Structure Of A Dap-Kinase 1 Mutant Length =		3e-07
3gc8_A	370	The Structure Of P38beta C162s In Complex With A Di		3e-07
2w4k_A	302	X-Ray Structure Of A Dap-Kinase 2-302 Length = 302		3e-07
4ewq_A	383	Human P38 Alpha Mapk In Complex With A Pyridazine B		3e-07
2v7o_A	336	Crystal Structure Of Human Calcium-Calmodulin-Depen		3e-07
3mh2_A	360	Mutagenesis Of P38 Map Kinase Establishes Key Roles		3e-07
2xzs_A	312	Death Associated Protein Kinase 1 Residues 1-312 Le		3e-07
1ctp_E	350	Structure Of The Mammalian Catalytic Subunit Of Cam		3e-07
2y0a_A	326	Structure Of Dapk1 Construct Residues 1-304 Length		3e-07
1cdk_A	350	Camp-Dependent Protein Kinase Catalytic Subunit (E.		3e-07
1cmk_E	350	Crystal Structures Of The Myristylated Catalytic Su		3e-07
1smh_A	350	Protein Kinase A Variant Complex With Completely Or		4e-07
3py3_A	380	Crystal Structure Of Phosphorylated P38alpha Map Ki		4e-07
3gu8_A	295	Crystal Structure Of Dapkl93g With N6-Cyclopentylad		4e-07
2w9f_B	306	Crystal Structure Of Cdk4 In Complex With A D-Type		4e-07
2y4i_B	319	Ksr2-Mek1 Heterodimer Length = 319		4e-07
3e7o_A	360	Crystal Structure Of Jnk2 Length = 360		5e-07
1gsl_A	243	Lectin (Fourth Isolated From (Griffonia Simplicifol		5e-07
3qal_E	350	Crystal Structure Of Arg280ala Mutant Of Catalytic		5e-07
2xs0_A	386	Linear Binding Motifs For Jnk And For Calcineurin A		5e-07
4dfy_A	371	Crystal Structure Of R194a Mutant Of Camp-Dependent		5e-07
1fmo_E	350	Crystal Structure Of A Polyhistidine-Tagged Recombi		5e-07
2qur_A	350	Crystal Structure Of F327aK285P MUTANT OF CAMP-Depe		5e-07
2erz_E	351	Crystal Structure Of C-amp Dependent Kinase (pka) B		5e-07
4ae6_A	343	Structure And Function Of The Human Sperm-specific		5e-07
4ae9_A	343	Structure And Function Of The Human Sperm-specific		5e-07
2h34_A	309	Apoenzyme Crystal Structure Of The Tuberculosis Ser		5e-07
4dfx_E	350	Crystal Structure Of Myristoylated K7c Catalytic Su		5e-07
2uzt_A	336	Pka Structures Of Akt, Indazole-Pyridine Inhibitors		5e-07
1apm_E	350	2.0 Angstrom Refined Crystal Structure Of The Catal		5e-07
2c1a_A	351	Structure Of Camp-Dependent Protein Kinase Complexe		5e-07
3npc_A	364	Crystal Structure Of Jnk2 Complexed With Birb796 Le		5e-07
2x0g_A	334	X-ray Structure Of A Dap-kinase Calmodulin Complex		5e-07
3fhi_A	350	Crystal Structure Of A Complex Between The Catalyti		5e-07
3pvb_A	345	Crystal Structure Of (73-244)ria:c Holoenzyme Of Ca		5e-07
2qcs_A	350	A Complex Structure Between The Catalytic And Regul		5e-07
1bkx_A	350	A Binary Complex Of The Catalytic Subunit Of Camp-D		5e-07
3agm_A	351	Complex Of Pka With The Bisubstrate Protein Kinase		6e-07
1svh_A	350	Crystal Structure Of Protein Kinase A In Complex Wi		6e-07
3nx8_A	351	Human Camp Dependent Protein Kinase In Complex With		6e-07
2jds_A	351	Structure Of Camp-Dependent Protein Kinase Complexe		6e-07
1xh7_A	350	Crystal Structures Of Protein Kinase B Selective In		6e-07
2gu8_A	337	Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel		6e-07
1q8w_A	350	The Catalytic Subunit Of Camp-Dependent Protein Kin		6e-07
3dnd_A	350	Camp-Dependent Protein Kinase Pka Catalytic Subunit		6e-07
1ydt_E	350	Structure Of Camp-Dependent Protein Kinase, Alpha-C		6e-07
1stc_E	350	Camp-Dependent Protein Kinase, Alpha-Catalytic Subu		6e-07
1l3r_E	350	Crystal Structure Of A Transition State Mimic Of Th		6e-07
3agl_A	351	Complex Of Pka With The Bisubstrate Protein Kinase		6e-07
2f7e_E	351	Pka Complexed With (S)-2-(1h-Indol-3-Yl)-1-(5-Isoqu		6e-07
1jbp_E	350	Crystal Structure Of The Catalytic Subunit Of Camp-		7e-07
4dg3_E	371	Crystal Structure Of R336a Mutant Of Camp-dependent		7e-07
3mvj_A	371	Human Cyclic Amp-Dependent Protein Kinase Pka Inhib		7e-07
3g0e_A	336	Kit Kinase Domain In Complex With Sunitinib Length		7e-07
1q61_A	350	Pka Triple Mutant Model Of Pkb Length = 350		7e-07
3l9m_A	351	Crystal Structure Of Pkab3 (Pka Triple Mutant V123a		7e-07
1j3h_A	350	Crystal Structure Of Apoenzyme Camp-Dependent Prote		7e-07
2jdt_A	351	Structure Of Pka-Pkb Chimera Complexed With Isoquin		7e-07
1szm_A	350	Dual Binding Mode Of Bisindolylmaleimide 2 To Prote		7e-07
3pze_A	358	Jnk1 In Complex With Inhibitor Length = 358		7e-07
1t45_A	331	Structural Basis For The Autoinhibition And Sti-571		7e-07
2vo0_A	351	Structure Of Pka-Pkb Chimera Complexed With C-(4-(4		7e-07
2uvy_A	351	Structure Of Pka-pkb Chimera Complexed With Methyl-		7e-07
3gc9_A	370	The Structure Of P38beta C119s, C162s In Complex Wi		8e-07
1t46_A	313	Structural Basis For The Autoinhibition And Sti-571		8e-07
1pkg_A	329	Structure Of A C-kit Kinase Product Complex Length		9e-07
3o7l_B	350	Crystal Structure Of Phospholamban (1-19):pka C-Sub		9e-07
1q24_A	350	Pka Double Mutant Model Of Pkb In Complex With Mgat		9e-07
2qr8_A	342	2.0a X-ray Structure Of C-terminal Kinase Domain Of		1e-06
3d83_A	360	Crystal Structure Of P38 Kinase In Complex With A B		1e-06
3d7z_A	360	Crystal Structure Of P38 Kinase In Complex With A B		1e-06
3gi3_A	360	Crystal Structure Of A N-Phenyl-N'-Naphthylurea Ana		1e-06
3elj_A	369	Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine		1e-06
1dhk_B	223	Structure Of Porcine Pancreatic Alpha-Amylase Lengt		1e-06
1vzo_A	355	The Structure Of The N-Terminal Kinase Domain Of Ms		1e-06
1syk_A	350	Crystal Structure Of E230q Mutant Of Camp-Dependent		1e-06
3mh0_A	360	Mutagenesis Of P38 Map Kinase Eshtablishes Key Role		1e-06
3gcp_A	360	Human P38 Map Kinase In Complex With Sb203580 Lengt		1e-06
3o8p_A	360	Conformational Plasticity Of P38 Map Kinase Dfg Mot		1e-06
3o17_A	370	Crystal Structure Of Jnk1-Alpha1 Isoform Length = 3		1e-06
3mh3_A	360	Mutagenesis Of P38 Map Kinase Establishes Key Roles		2e-06
3uc4_A	362	The Crystal Structure Of Snf1-Related Kinase 2.6 Le		2e-06
3ujg_A	361	Crystal Structure Of Snrk2.6 In Complex With Hab1 L		2e-06
3fzo_A	277	Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosin		2e-06
2dyl_A	318	Crystal Structure Of Human Mitogen-Activated Protei		2e-06
2qr7_A	342	2.0a X-Ray Structure Of C-Terminal Kinase Domain Of		2e-06
4h1j_A	293	Crystal Structure Of Pyk2 With The Pyrazole 13a Len		2e-06
3mh1_A	360	Mutagenesis Of P38 Map Kinase Establishes Key Roles		2e-06
3fv8_A	355	Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774 Le		2e-06
2g01_A	370	Pyrazoloquinolones As Novel, Selective Jnk1 Inhibit		2e-06
3qd2_B	332	Crsytal Structure Of Mouse Perk Kinase Domain Lengt		2e-06
3cc6_A	281	Crystal Structure Of Kinase Domain Of Protein Tyros		2e-06
3fi3_A	364	Crystal Structure Of Jnk3 With Indazole Inhibitor,		2e-06
3qam_E	350	Crystal Structure Of Glu208ala Mutant Of Catalytic		3e-06
3kl8_A	269	Camkiintide Inhibitor Complex Length = 269		3e-06
2pzy_A	324	Structure Of Mk2 Complexed With Compound 76 Length		3e-06
1jnk_A	423	The C-Jun N-Terminal Kinase (Jnk3s) Complexed With		3e-06
3ka0_A	320	Mk2 Complex With Inhibitor 6-(5-(2-Aminopyrimidin-4		3e-06
4h36_A	356	Crystal Structure Of Jnk3 In Complex With Atf2 Pept		4e-06
2b1p_A	355	Inhibitor Complex Of Jnk3 Length = 355		4e-06
3fpm_A	325	Crystal Structure Of A Squarate Inhibitor Bound To		4e-06
3oxi_A	362	Design And Synthesis Of Disubstituted Thiophene And		4e-06
3ptg_A	363	Design And Synthesis Of A Novel, Orally Efficacious		4e-06
1viw_B	205	Tenebrio Molitor Alpha-Amylase-Inhibitor Complex Le		4e-06
3uc3_A	361	The Crystal Structure Of Snf1-Related Kinase 2.3 Le		4e-06
2jbo_A	326	Protein Kinase Mk2 In Complex With An Inhibitor (Cr		4e-06
2exc_X	356	Inhibitor Complex Of Jnk3 Length = 356		4e-06
2r9s_A	356	C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Qu		4e-06
2o0u_A	364	Crystal Structure Of Human Jnk3 Complexed With N-{3		4e-06
3kk9_A	282	Camkii Substrate Complex B Length = 282		4e-06
1pmn_A	364	Crystal Structure Of Jnk3 In Complex With An Imidaz		4e-06
3fi2_A	353	Crystal Structure Of Jnk3 With Amino-Pyrazole Inhib		4e-06
3udb_A	317	Crystal Structure Of Snrk2.6 Length = 317		4e-06
2p3g_X	327	Crystal Structure Of A Pyrrolopyridine Inhibitor Bo		4e-06
4hzs_A	341	Crystal Structure Of Ack1 Kinase Domain With C-term		4e-06
3ttj_A	464	Crystal Structure Of Jnk3 Complexed With Cc-359, A		4e-06
3r2y_A	319	Mk2 Kinase Bound To Compound 1 Length = 319		4e-06
3kk8_A	284	Camkii Substrate Complex A Length = 284		4e-06
3kvx_A	364	Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562 Le		4e-06
4ewh_B	275	Co-Crystal Structure Of Ack1 With Inhibitor Length		4e-06
1ioa_A	240	Arcelin-5, A Lectin-Like Defense Protein From Phase		4e-06
2ok1_A	365	Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3		4e-06
3r2b_A	318	Mk2 Kinase Bound To Compound 5b Length = 318		4e-06
1u54_A	291	Crystal Structures Of The Phosphorylated And Unphos		4e-06
3gok_A	334	Binding Site Mapping Of Protein Ligands Length = 33		5e-06
3eqp_B	276	Crystal Structure Of Ack1 With Compound T95 Length		5e-06
2oza_A	356	Structure Of P38alpha Complex Length = 356		5e-06
1kwp_A	400	Crystal Structure Of Mapkap2 Length = 400		6e-06
1u46_A	291	Crystal Structure Of The Unphosphorylated Kinase Do		6e-06
1rdq_E	350	Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of		6e-06
3hng_A	360	Crystal Structure Of Vegfr1 In Complex With N-(4-ch		6e-06
4id7_A	273	Ack1 Kinase In Complex With The Inhibitor Cis-3-[8-		6e-06
3ll6_A	337	Crystal Structure Of The Human Cyclin G Associated		6e-06
2onl_C	406	Crystal Structure Of The P38a-Mapkap Kinase 2 Heter		7e-06
4hzr_A	277	Crystal Structure Of Ack1 Kinase Domain Length = 27		7e-06
3p23_A	432	Crystal Structure Of The Human Kinase And Rnase Dom		7e-06
2vn9_A	301	Crystal Structure Of Human Calcium Calmodulin Depen		7e-06
2wel_A	327	Crystal Structure Of Su6656-Bound CalciumCALMODULIN		7e-06
1y6a_A	366	Crystal Structure Of Vegfr2 In Complex With A 2-Ani		8e-06
2rio_A	434	Structure Of The Dual Enzyme Ire1 Reveals The Basis		8e-06
3vhe_A	359	Crystal Structure Of Human Vegfr2 Kinase Domain Wit		8e-06
3vid_A	356	Crystal Structure Of Human Vegfr2 Kinase Domain Wit		9e-06
2bdw_A	362	Crystal Structure Of The Auto-Inhibited Kinase Doma		9e-06
3vhk_A	368	Crystal Structure Of The Vegfr2 Kinase Domain In Co		9e-06
3f3z_A	277	Crystal Structure Of Cryptosporidium Parvum Calcium		1e-05
3zdi_A	350	Glycogen Synthase Kinase 3 Beta Complexed With Axin		1e-05
3f7z_A	350	X-ray Co-crystal Structure Of Glycogen Synthase Kin		1e-05
2ow3_A	352	Glycogen Synthase Kinase-3 Beta In Complex With Bis		1e-05
3sd0_A	350	Identification Of A Glycogen Synthase Kinase-3b Inh		1e-05
2qg5_A	294	Cryptosporidium Parvum Calcium Dependent Protein Ki		1e-05
4e7w_A	394	Structure Of Gsk3 From Ustilago Maydis Length = 394		1e-05
1gng_A	378	Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With		1e-05
3zrk_A	371	Identification Of 2-(4-Pyridyl)thienopyridinones As		1e-05
4afj_A	367	5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selec		1e-05
3zut_A	362	The Structure Of Ost1 (D160a) Kinase Length = 362		1e-05
2o5k_A	372	Crystal Structure Of Gsk3beta In Complex With A Ben		1e-05
3gb2_A	353	Gsk3beta Inhibitor Complex Length = 353		2e-05
3p1a_A	311	Structure Of Human Membrane-Associated Tyrosine- An		2e-05
3sdj_A	448	Structure Of Rnase-Inactive Point Mutant Of Oligome		2e-05
2vd5_A	412	Structure Of Human Myotonic Dystrophy Protein Kinas		2e-05
1r0e_A	391	Glycogen Synthase Kinase-3 Beta In Complex With 3-I		2e-05
1q5k_A	414	Crystal Structure Of Glycogen Synthase Kinase 3 In		2e-05
3fbv_A	448	Crystal Structure Of The Oligomer Formed By The Kin		2e-05
4dit_A	382	Crystal Structure Of Gsk3beta In Complex With A Imi		2e-05
2i6l_A	320	Crystal Structure Of Human Mitogen Activated Protei		2e-05
2ac5_A	316	Structure Of Human Mnk2 Kinase Domain Mutant D228g		2e-05
4fvp_A	289	Crystal Structure Of The Jak2 Pseudokinase Domain (		2e-05
3kn5_A	325	Crystal Structure Of The C-Terminal Kinase Domain O		2e-05
3f88_A	349	Glycogen Synthase Kinase 3beta Inhibitor Complex Le		2e-05
3say_A	430	Crystal Structure Of Human Glycogen Synthase Kinase		3e-05
1i09_A	420	Structure Of Glycogen Synthase Kinase-3 (Gsk3b) Len		3e-05
1nxk_A	400	Crystal Structure Of Staurosporine Bound To Map Kap		3e-05
3n9x_A	432	Crystal Structure Of Map Kinase From Plasmodium Ber		3e-05
1pyx_A	422	Gsk-3 Beta Complexed With Amp-Pnp Length = 422		3e-05
2buj_A	317	Crystal Structure Of The Human Serine-Threonine Kin		3e-05
1cm8_A	367	Phosphorylated Map Kinase P38-Gamma Length = 367		3e-05
1q3d_A	424	Gsk-3 Beta Complexed With Staurosporine Length = 42		3e-05
4acc_A	465	Gsk3b In Complex With Inhibitor Length = 465		3e-05
1h8f_A	352	Glycogen Synthase Kinase 3 Beta. Length = 352		4e-05
3lj0_A	434	Ire1 Complexed With Adp And Quercetin Length = 434		4e-05
3zuu_A	362	The Structure Of Ost1 (D160a, S175d) Kinase In Comp		4e-05
4dn5_A	356	Crystal Structure Of Nf-kb-inducing Kinase (nik) Le		4e-05
1uv5_A	350	Glycogen Synthase Kinase 3 Beta Complexed With 6-Br		4e-05
4g3g_A	350	Crystal Structure Of Murine Nf-kappab Inducing Kina		4e-05
3is5_A	285	Crystal Structure Of Cdpk Kinase Domain From Toxopl		5e-05
4g3f_A	336	Crystal Structure Of Murine Nf-kappab Inducing Kina		5e-05
4g3d_A	371	Crystal Structure Of Human Nf-kappab Inducing Kinas		5e-05
3fpq_A	290	Crystal Structure Of The Kinase Domain Of Wnk1 Leng		5e-05
4g3c_A	352	Crystal Structure Of Apo Murine Nf-kappab Inducing		5e-05
3nie_A	429	Crystal Structure Of Pf11_0147 Length = 429		5e-05
1o9u_A	350	Glycogen Synthase Kinase 3 Beta Complexed With Axin		5e-05
1qmo_E	133	Structure Of Fril, A Legume Lectin That Delays Hema		6e-05
2hw6_A	307	Crystal Structure Of Mnk1 Catalytic Domain Length =		6e-05
3uib_A	362	Map Kinase Lmampk10 From Leishmania Major In Comple		8e-05
3pg1_A	362	Map Kinase Lmampk10 From Leishmania Major (1.95 Ang		8e-05
2ac3_A	316	Structure Of Human Mnk2 Kinase Domain Length = 316		1e-04
4f99_A	361	Human Cdc7 Kinase In Complex With Dbf4 And Nucleoti		1e-04

>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector Length = 349

Iteration: 1
 Score =  158 bits (399), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 93/292 (31%), Positives = 160/292 (54%), Gaps = 8/292 (2%)
Query: 353 RITYQEIEAATKGFSEEXXXXXXXXXXXXXXXLEGGGAEIAVKRISHEN-DGGTRAFLAE 411
           R + +E++ A+  FS +               L   G  +AVKR+  E   GG   F  E
Sbjct: 27  RFSLRELQVASDNFSNKNILGRGGFGKVYKGRL-ADGTLVAVKRLKEERXQGGELQFQTE 85
Query: 412 ISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMM-LSCEERIRV 470
           +  +    H++L+ LRG+C      L LVY YM NGS+   + +   S   L   +R R+
Sbjct: 86  VEMISMAVHRNLLRLRGFCMTPTERL-LVYPYMANGSVASCLRERPESQPPLDWPKRQRI 144
Query: 471 LKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRVV 530
               A G+ YLH+  + K++HRD+K++N+LLD+E    +GDFGLA++  +        V 
Sbjct: 145 ALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAVR 204
Query: 531 GTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGK----PNLVEMVWELMVQ 586
           GT+G++APE  S+G++S +TDVFG+G+++LE+++G+R  +  +     +++ + W   + 
Sbjct: 205 GTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLL 264
Query: 587 GKXXXXXXXXXXXKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLEG 638
            +           +G + ++EVE+++ + LLC    P  RP M +VV++LEG
Sbjct: 265 KEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEG 316

>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On Plant Receptor- Like Kinase Bak1 Activation Length = 326

Iteration: 1
 Score =  154 bits (390), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 86/256 (33%), Positives = 147/256 (57%), Gaps = 7/256 (2%)
Query: 389 GAEIAVKRISHEN-DGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENG 447
           G  +AVKR+  E   GG   F  E+  +    H++L+ LRG+C      L LVY YM NG
Sbjct: 54  GXLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERL-LVYPYMANG 112
Query: 448 SLDKWIFQCDGSMM-LSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMN 506
           S+   + +   S   L   +R R+    A G+ YLH+  + K++HRD+K++N+LLD+E  
Sbjct: 113 SVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFE 172
Query: 507 GRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGR 566
             +GDFGLA++  +        V G +G++APE  S+G++S +TDVFG+G+++LE+++G+
Sbjct: 173 AVVGDFGLAKLMDYKDXHVXXAVRGXIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQ 232
Query: 567 RPIEEGK----PNLVEMVWELMVQGKXXXXXXXXXXXKGGFDEDEVERVLHLGLLCAYPD 622
           R  +  +     +++ + W   +  +           +G + ++EVE+++ + LLC    
Sbjct: 233 RAFDLARLANDDDVMLLDWVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSS 292
Query: 623 PRARPTMRQVVKVLEG 638
           P  RP M +VV++LEG
Sbjct: 293 PMERPKMSEVVRMLEG 308

>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With Kinase Pto Length = 327

Iteration: 1
 Score =  124 bits (310), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 73/194 (37%), Positives = 116/194 (59%), Gaps = 8/194 (4%)
Query: 389 GAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGS 448
           GA++A+KR + E+  G   F  EI +L   +H  LV L G+C  E+  ++L+Y YMENG+
Sbjct: 63  GAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCD-ERNEMILIYKYMENGN 121
Query: 449 LDKWIFQCD-GSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNG 507
           L + ++  D  +M +S E+R+ +    A G+ YLH    + ++HRD+KS N+LLD+    
Sbjct: 122 LKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHT---RAIIHRDVKSINILLDENFVP 178
Query: 508 RLGDFGLARMHGH-GQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGR 566
           ++ DFG+++     GQ      V GT+GY+ PE F  GR + ++DV+ FG+++ EVL  R
Sbjct: 179 KITDFGISKKGTELGQTHLXXVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCAR 238
Query: 567 RPIEEGKPNLVEMV 580
             I +  P   EMV
Sbjct: 239 SAIVQSLPR--EMV 250

>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By Bacterial Effector Protein Avrpto Length = 321

Iteration: 1
 Score =  121 bits (303), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 72/194 (37%), Positives = 115/194 (59%), Gaps = 8/194 (4%)
Query: 389 GAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGS 448
           GA++A+KR + E+  G   F  EI +L   +H  LV L G+C  E+  ++L+Y YMENG+
Sbjct: 63  GAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCD-ERNEMILIYKYMENGN 121
Query: 449 LDKWIFQCD-GSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNG 507
           L + ++  D  +M +S E+R+ +    A G+ YLH    + ++HRD+KS N+LLD+    
Sbjct: 122 LKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHT---RAIIHRDVKSINILLDENFVP 178
Query: 508 RLGDFGLARMHGHGQVASTTRVV-GTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGR 566
           ++ DFG+++            VV GT+GY+ PE F  GR + ++DV+ FG+++ EVL  R
Sbjct: 179 KITDFGISKKGTELDQTHLXXVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCAR 238
Query: 567 RPIEEGKPNLVEMV 580
             I +  P   EMV
Sbjct: 239 SAIVQSLPR--EMV 250

>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4 Length = 307

Iteration: 1
 Score =  119 bits (299), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 74/251 (29%), Positives = 131/251 (52%), Gaps = 10/251 (3%)
Query: 392 IAVKRISHENDGGT----RAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENG 447
           +AVK+++   D  T    + F  EI  + + +H++LV L G+   +   L LVY YM NG
Sbjct: 57  VAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGF-SSDGDDLCLVYVYMPNG 115
Query: 448 SLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNG 507
           SL   +   DG+  LS   R ++ +  A G+ +LHE      +HRDIKS+N+LLD+    
Sbjct: 116 SLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTA 172
Query: 508 RLGDFGLARM-HGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGR 566
           ++ DFGLAR      Q    +R+VGT  Y+APE    G  + ++D++ FG+++LE+++G 
Sbjct: 173 KISDFGLARASEKFAQTVMXSRIVGTTAYMAPEAL-RGEITPKSDIYSFGVVLLEIITGL 231
Query: 567 RPIEEGKPNLVEMVWELMVQGKXXXXXXXXXXXKGGFDEDEVERVLHLGLLCAYPDPRAR 626
             ++E +   + +  +  ++ +               D   VE +  +   C +     R
Sbjct: 232 PAVDEHREPQLLLDIKEEIEDEEKTIEDYIDKKMNDADSTSVEAMYSVASQCLHEKKNKR 291
Query: 627 PTMRQVVKVLE 637
           P +++V ++L+
Sbjct: 292 PDIKKVQQLLQ 302

>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4 Length = 307

Iteration: 1
 Score =  119 bits (297), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 74/251 (29%), Positives = 130/251 (51%), Gaps = 10/251 (3%)
Query: 392 IAVKRISHENDGGT----RAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENG 447
           +AVK+++   D  T    + F  EI  + + +H++LV L G+   +   L LVY YM NG
Sbjct: 57  VAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGF-SSDGDDLCLVYVYMPNG 115
Query: 448 SLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNG 507
           SL   +   DG+  LS   R ++ +  A G+ +LHE      +HRDIKS+N+LLD+    
Sbjct: 116 SLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTA 172
Query: 508 RLGDFGLARM-HGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGR 566
           ++ DFGLAR      Q     R+VGT  Y+APE    G  + ++D++ FG+++LE+++G 
Sbjct: 173 KISDFGLARASEKFAQTVMXXRIVGTTAYMAPEAL-RGEITPKSDIYSFGVVLLEIITGL 231
Query: 567 RPIEEGKPNLVEMVWELMVQGKXXXXXXXXXXXKGGFDEDEVERVLHLGLLCAYPDPRAR 626
             ++E +   + +  +  ++ +               D   VE +  +   C +     R
Sbjct: 232 PAVDEHREPQLLLDIKEEIEDEEKTIEDYIDKKMNDADSTSVEAMYSVASQCLHEKKNKR 291
Query: 627 PTMRQVVKVLE 637
           P +++V ++L+
Sbjct: 292 PDIKKVQQLLQ 302

>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form Length = 301

Iteration: 1
 Score =  118 bits (296), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 74/251 (29%), Positives = 130/251 (51%), Gaps = 10/251 (3%)
Query: 392 IAVKRISHENDGGT----RAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENG 447
           +AVK+++   D  T    + F  EI  + + +H++LV L G+   +   L LVY YM NG
Sbjct: 51  VAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGF-SSDGDDLCLVYVYMPNG 109
Query: 448 SLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNG 507
           SL   +   DG+  LS   R ++ +  A G+ +LHE      +HRDIKS+N+LLD+    
Sbjct: 110 SLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTA 166
Query: 508 RLGDFGLARM-HGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGR 566
           ++ DFGLAR      Q     R+VGT  Y+APE    G  + ++D++ FG+++LE+++G 
Sbjct: 167 KISDFGLARASEKFAQXVMXXRIVGTTAYMAPEAL-RGEITPKSDIYSFGVVLLEIITGL 225
Query: 567 RPIEEGKPNLVEMVWELMVQGKXXXXXXXXXXXKGGFDEDEVERVLHLGLLCAYPDPRAR 626
             ++E +   + +  +  ++ +               D   VE +  +   C +     R
Sbjct: 226 PAVDEHREPQLLLDIKEEIEDEEKTIEDYIDKKMNDADSTSVEAMYSVASQCLHEKKNKR 285
Query: 627 PTMRQVVKVLE 637
           P +++V ++L+
Sbjct: 286 PDIKKVQQLLQ 296

>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain Length = 298

Iteration: 1
 Score =  115 bits (287), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 73/251 (29%), Positives = 127/251 (50%), Gaps = 10/251 (3%)
Query: 392 IAVKRISHENDGGT----RAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENG 447
           +AVK+++   D  T    + F  EI    + +H++LV L G+   +   L LVY Y  NG
Sbjct: 48  VAVKKLAAMVDITTEELKQQFDQEIKVXAKCQHENLVELLGF-SSDGDDLCLVYVYXPNG 106
Query: 448 SLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNG 507
           SL   +   DG+  LS   R ++ +  A G+ +LHE      +HRDIKS+N+LLD+    
Sbjct: 107 SLLDRLSCLDGTPPLSWHXRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTA 163
Query: 508 RLGDFGLARM-HGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGR 566
           ++ DFGLAR      Q    +R+VGT  Y APE    G  + ++D++ FG+++LE+++G 
Sbjct: 164 KISDFGLARASEKFAQXVXXSRIVGTTAYXAPEAL-RGEITPKSDIYSFGVVLLEIITGL 222
Query: 567 RPIEEGKPNLVEMVWELMVQGKXXXXXXXXXXXKGGFDEDEVERVLHLGLLCAYPDPRAR 626
             ++E +   + +  +  ++ +               D   VE    +   C +     R
Sbjct: 223 PAVDEHREPQLLLDIKEEIEDEEKTIEDYIDKKXNDADSTSVEAXYSVASQCLHEKKNKR 282
Query: 627 PTMRQVVKVLE 637
           P +++V ++L+
Sbjct: 283 PDIKKVQQLLQ 293

>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With Staurosporine Length = 309

Iteration: 1
 Score = 96.7 bits (239), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 56/185 (30%), Positives = 104/185 (56%), Gaps = 5/185 (2%)
Query: 386 EGGGAEIAVKRISHENDGGTRA--FLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDY 443
           E  G+++AVK +  ++    R   FL E++ + RL+H ++V   G    +  +L +V +Y
Sbjct: 57  EWHGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMG-AVTQPPNLSIVTEY 115
Query: 444 MENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDK 503
           +  GSL + + +      L    R+ +  DVA G+ YLH      ++HRD+KS N+L+DK
Sbjct: 116 LSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNR-NPPIVHRDLKSPNLLVDK 174
Query: 504 EMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVL 563
           +   ++ DFGL+R+     + S     GT  ++APEV     ++ ++DV+ FG+++ E+ 
Sbjct: 175 KYTVKVCDFGLSRLKASXFLXSKX-AAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELA 233
Query: 564 SGRRP 568
           + ++P
Sbjct: 234 TLQQP 238

>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In Complex With Staurosporine Length = 309

Iteration: 1
 Score = 96.3 bits (238), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 55/185 (29%), Positives = 106/185 (57%), Gaps = 5/185 (2%)
Query: 386 EGGGAEIAVKRISHENDGGTRA--FLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDY 443
           E  G+++AVK +  ++    R   FL E++ + RL+H ++V   G    +  +L +V +Y
Sbjct: 57  EWHGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMG-AVTQPPNLSIVTEY 115
Query: 444 MENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDK 503
           +  GSL + + +      L    R+ +  DVA G+ YLH      ++HR++KS N+L+DK
Sbjct: 116 LSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNR-NPPIVHRNLKSPNLLVDK 174
Query: 504 EMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVL 563
           +   ++ DFGL+R+     ++S +   GT  ++APEV     ++ ++DV+ FG+++ E+ 
Sbjct: 175 KYTVKVCDFGLSRLKASTFLSSKS-AAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELA 233
Query: 564 SGRRP 568
           + ++P
Sbjct: 234 TLQQP 238

>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length Carboxyl-Terminal Src Kinase At 2.5 A Resolution Length = 450

Iteration: 1
 Score = 94.4 bits (233), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 68/183 (37%), Positives = 104/183 (56%), Gaps = 15/183 (8%)
Query: 389 GAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGS 448
           G ++AVK I  +ND   +AFLAE S + +L+H +LV L G    EKG L +V +YM  GS
Sbjct: 216 GNKVAVKCI--KNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGS 273
Query: 449 LDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGR 508
           L  ++ +  G  +L  +  ++   DV   + YL EG     +HRD+ + NVL+ ++   +
Sbjct: 274 LVDYL-RSRGRSVLGGDCLLKFSLDVCEAMEYL-EG--NNFVHRDLAARNVLVSEDNVAK 329
Query: 509 LGDFGLARMHGHGQVASTTRVVGT--VGYLAPEVFSSGRASTQTDVFGFGILILEVLS-G 565
           + DFGL +       AS+T+  G   V + APE     + ST++DV+ FGIL+ E+ S G
Sbjct: 330 VSDFGLTKE------ASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFG 383
Query: 566 RRP 568
           R P
Sbjct: 384 RVP 386

>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol Length = 315

Iteration: 1
 Score = 94.0 bits (232), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 68/251 (27%), Positives = 119/251 (47%), Gaps = 30/251 (11%)
Query: 391 EIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLD 450
           ++A+K+I  E++   +AF+ E+  L R+ H ++V L G C      + LV +Y E GSL 
Sbjct: 34  DVAIKQIESESE--RKAFIVELRQLSRVNHPNIVKLYGACL---NPVCLVMEYAEGGSLY 88
Query: 451 KWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNG--- 507
             +   +     +    +      + GV YLH    K ++HRD+K  N+LL   + G   
Sbjct: 89  NVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLL---VAGGTV 145
Query: 508 -RLGDFGLA-RMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSG 565
            ++ DFG A  +  H      T   G+  ++APEVF     S + DVF +GI++ EV++ 
Sbjct: 146 LKICDFGTACDIQTH-----MTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITR 200
Query: 566 RRPIEEGKPNLVEMVWELMVQGKXXXXXXXXXXXKGGFDEDEVERVLHLGLLCAYPDPRA 625
           R+P +E       ++W +                +    ++  + +  L   C   DP  
Sbjct: 201 RKPFDEIGGPAFRIMWAV------------HNGTRPPLIKNLPKPIESLMTRCWSKDPSQ 248
Query: 626 RPTMRQVVKVL 636
           RP+M ++VK++
Sbjct: 249 RPSMEEIVKIM 259

>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 263

Iteration: 1
 Score = 93.6 bits (231), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 68/183 (37%), Positives = 104/183 (56%), Gaps = 15/183 (8%)
Query: 389 GAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGS 448
           G ++AVK I  +ND   +AFLAE S + +L+H +LV L G    EKG L +V +YM  GS
Sbjct: 29  GNKVAVKCI--KNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGS 86
Query: 449 LDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGR 508
           L  ++ +  G  +L  +  ++   DV   + YL EG     +HRD+ + NVL+ ++   +
Sbjct: 87  LVDYL-RSRGRSVLGGDCLLKFSLDVCEAMEYL-EG--NNFVHRDLAARNVLVSEDNVAK 142
Query: 509 LGDFGLARMHGHGQVASTTRVVGT--VGYLAPEVFSSGRASTQTDVFGFGILILEVLS-G 565
           + DFGL +       AS+T+  G   V + APE     + ST++DV+ FGIL+ E+ S G
Sbjct: 143 VSDFGLTKE------ASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFG 196
Query: 566 RRP 568
           R P
Sbjct: 197 RVP 199

>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With Its Activating Protein Tab1 Length = 307

Iteration: 1
 Score = 93.6 bits (231), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 68/251 (27%), Positives = 119/251 (47%), Gaps = 30/251 (11%)
Query: 391 EIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLD 450
           ++A+K+I  E++   +AF+ E+  L R+ H ++V L G C      + LV +Y E GSL 
Sbjct: 33  DVAIKQIESESE--RKAFIVELRQLSRVNHPNIVKLYGACL---NPVCLVMEYAEGGSLY 87
Query: 451 KWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNG--- 507
             +   +     +    +      + GV YLH    K ++HRD+K  N+LL   + G   
Sbjct: 88  NVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLL---VAGGTV 144
Query: 508 -RLGDFGLA-RMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSG 565
            ++ DFG A  +  H      T   G+  ++APEVF     S + DVF +GI++ EV++ 
Sbjct: 145 LKICDFGTACDIQTH-----MTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITR 199
Query: 566 RRPIEEGKPNLVEMVWELMVQGKXXXXXXXXXXXKGGFDEDEVERVLHLGLLCAYPDPRA 625
           R+P +E       ++W +                +    ++  + +  L   C   DP  
Sbjct: 200 RKPFDEIGGPAFRIMWAV------------HNGTRPPLIKNLPKPIESLMTRCWSKDPSQ 247
Query: 626 RPTMRQVVKVL 636
           RP+M ++VK++
Sbjct: 248 RPSMEEIVKIM 258

>pdb|3UJO|A Chain A, Galactose-Specific Seed Lectin From Dolichos Lablab In Complex With Adenine And Galactose Length = 281

Iteration: 1
 Score = 93.2 bits (230), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 85/271 (31%), Positives = 128/271 (47%), Gaps = 48/271 (17%)
Query: 26  VDFVFNGFNSSNLSLYGTATVESRILTLTNS------TTFTIGRALYPSKIPTKRPNSSY 79
           + F F  FN +NL L   ATV S  L +T +      T  ++GRA Y + I      +  
Sbjct: 27  ISFTFKKFNETNLILQRDATVSSGKLRITKAAENGVPTAGSLGRAFYSTPIQIWDNTTGT 86
Query: 80  VYPFSTSFIFAMAPYKGVLAGHGLVFLFVPFHGIKGATEAQHLGLFNRTNDGNSSNHVFG 139
           V  ++TSF F +          GL F  VP  G +   +   LGLF+  N   SSN    
Sbjct: 87  VASWATSFTFNLQAPNAASPADGLAFALVPV-GSQPKDKGGFLGLFDSKNYA-SSNQTVA 144
Query: 140 VEFDVFKNQEFNDIDENHVGIDVNSLTSVSAHAAGYWPDNQXXXXXXXXXXXXXXXEKSF 199
           VEFD F N  + D  E H+GIDVNS+ S+   +   W                       
Sbjct: 145 VEFDTFYNGGW-DPTERHIGIDVNSIKSIKTTS---W----------------------- 177
Query: 200 KELKLNNGKNYQVWIDYADSFINITMVEAGMKRPKRP---LLSVPLNLSGVLEDEMYVGF 256
                 NG+N +V I Y DS  N+ +  A +  P +    ++S  ++L+ VL + + VGF
Sbjct: 178 ---DFANGENAEVLITY-DSSTNLLV--ASLVHPSQKTSFIVSERVDLTSVLPEWVSVGF 231
Query: 257 TAATGQ---LVESHKILAWSFSNTKFSLSEE 284
           +A TG     VE++++L+WSF+ +K S+++E
Sbjct: 232 SATTGLSKGYVETNEVLSWSFA-SKLSINKE 261

>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In Complex With Inhibitor Staurosporine Length = 278

Iteration: 1
 Score = 93.2 bits (230), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 68/183 (37%), Positives = 104/183 (56%), Gaps = 15/183 (8%)
Query: 389 GAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGS 448
           G ++AVK I  +ND   +AFLAE S + +L+H +LV L G    EKG L +V +YM  GS
Sbjct: 44  GNKVAVKCI--KNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGS 101
Query: 449 LDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGR 508
           L  ++ +  G  +L  +  ++   DV   + YL EG     +HRD+ + NVL+ ++   +
Sbjct: 102 LVDYL-RSRGRSVLGGDCLLKFSLDVCEAMEYL-EG--NNFVHRDLAARNVLVSEDNVAK 157
Query: 509 LGDFGLARMHGHGQVASTTRVVGT--VGYLAPEVFSSGRASTQTDVFGFGILILEVLS-G 565
           + DFGL +       AS+T+  G   V + APE     + ST++DV+ FGIL+ E+ S G
Sbjct: 158 VSDFGLTKE------ASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFG 211
Query: 566 RRP 568
           R P
Sbjct: 212 RVP 214

>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib Length = 266

Iteration: 1
 Score = 92.4 bits (228), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 60/181 (33%), Positives = 97/181 (53%), Gaps = 8/181 (4%)
Query: 391 EIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLD 450
           ++A+K I  E       F+ E   + +L H  LV L G C  E+  + LV+++ME+G L 
Sbjct: 33  KVAIKTI-REGAMSEEDFIEEAEVMMKLSHPKLVQLYGVC-LEQAPICLVFEFMEHGCLS 90
Query: 451 KWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLG 510
            ++    G  + + E  + +  DV  G+ YL E     V+HRD+ + N L+ +    ++ 
Sbjct: 91  DYLRTQRG--LFAAETLLGMCLDVCEGMAYLEEA---SVIHRDLAARNCLVGENQVIKVS 145
Query: 511 DFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLS-GRRPI 569
           DFG+ R     Q  S+T     V + +PEVFS  R S+++DV+ FG+L+ EV S G+ P 
Sbjct: 146 DFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPY 205
Query: 570 E 570
           E
Sbjct: 206 E 206

>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 269

Iteration: 1
 Score = 92.4 bits (228), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 68/183 (37%), Positives = 103/183 (56%), Gaps = 15/183 (8%)
Query: 389 GAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGS 448
           G ++AVK I  +ND   +AFLAE S + +L+H +LV L G    EKG L +V +YM  GS
Sbjct: 35  GNKVAVKCI--KNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGS 92
Query: 449 LDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGR 508
           L  ++ +  G  +L  +  ++   DV   + YL EG     +HRD+ + NVL+ ++   +
Sbjct: 93  LVDYL-RSRGRSVLGGDCLLKFSLDVCEAMEYL-EG--NNFVHRDLAARNVLVSEDNVAK 148
Query: 509 LGDFGLARMHGHGQVASTTRVVGT--VGYLAPEVFSSGRASTQTDVFGFGILILEVLS-G 565
           + DFGL +       AS+T+  G   V + APE       ST++DV+ FGIL+ E+ S G
Sbjct: 149 VSDFGLTKE------ASSTQDTGKLPVKWTAPEALREAAFSTKSDVWSFGILLWEIYSFG 202
Query: 566 RRP 568
           R P
Sbjct: 203 RVP 205

>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2 Tyrosine Kinase Catalytic Domain Length = 264

Iteration: 1
 Score = 92.0 bits (227), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 60/181 (33%), Positives = 97/181 (53%), Gaps = 8/181 (4%)
Query: 391 EIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLD 450
           ++A+K I  E       F+ E   + +L H  LV L G C  E+  + LV+++ME+G L 
Sbjct: 31  KVAIKTI-REGAMSEEDFIEEAEVMMKLSHPKLVQLYGVC-LEQAPICLVFEFMEHGCLS 88
Query: 451 KWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLG 510
            ++    G  + + E  + +  DV  G+ YL E     V+HRD+ + N L+ +    ++ 
Sbjct: 89  DYLRTQRG--LFAAETLLGMCLDVCEGMAYLEEAC---VIHRDLAARNCLVGENQVIKVS 143
Query: 511 DFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLS-GRRPI 569
           DFG+ R     Q  S+T     V + +PEVFS  R S+++DV+ FG+L+ EV S G+ P 
Sbjct: 144 DFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPY 203
Query: 570 E 570
           E
Sbjct: 204 E 204

>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase Itk Catalytic Domain With Thienopyrazolylindole Inhibitor 090 Length = 266

Iteration: 1
 Score = 92.0 bits (227), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 60/181 (33%), Positives = 97/181 (53%), Gaps = 8/181 (4%)
Query: 391 EIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLD 450
           ++A+K I  E       F+ E   + +L H  LV L G C  E+  + LV+++ME+G L 
Sbjct: 33  KVAIKTI-REGAMSEEDFIEEAEVMMKLSHPKLVQLYGVC-LEQAPICLVFEFMEHGCLS 90
Query: 451 KWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLG 510
            ++    G  + + E  + +  DV  G+ YL E     V+HRD+ + N L+ +    ++ 
Sbjct: 91  DYLRTQRG--LFAAETLLGMCLDVCEGMAYLEEAC---VIHRDLAARNCLVGENQVIKVS 145
Query: 511 DFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLS-GRRPI 569
           DFG+ R     Q  S+T     V + +PEVFS  R S+++DV+ FG+L+ EV S G+ P 
Sbjct: 146 DFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPY 205
Query: 570 E 570
           E
Sbjct: 206 E 206

>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52 Length = 269

Iteration: 1
 Score = 91.7 bits (226), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 60/181 (33%), Positives = 97/181 (53%), Gaps = 8/181 (4%)
Query: 391 EIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLD 450
           ++A+K I  E       F+ E   + +L H  LV L G C  E+  + LV+++ME+G L 
Sbjct: 36  KVAIKTI-REGAMSEEDFIEEAEVMMKLSHPKLVQLYGVC-LEQAPICLVFEFMEHGCLS 93
Query: 451 KWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLG 510
            ++    G  + + E  + +  DV  G+ YL E     V+HRD+ + N L+ +    ++ 
Sbjct: 94  DYLRTQRG--LFAAETLLGMCLDVCEGMAYLEEA---CVIHRDLAARNCLVGENQVIKVS 148
Query: 511 DFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLS-GRRPI 569
           DFG+ R     Q  S+T     V + +PEVFS  R S+++DV+ FG+L+ EV S G+ P 
Sbjct: 149 DFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPY 208
Query: 570 E 570
           E
Sbjct: 209 E 209

>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor Length = 286

Iteration: 1
 Score = 91.7 bits (226), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 60/181 (33%), Positives = 97/181 (53%), Gaps = 8/181 (4%)
Query: 391 EIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLD 450
           ++A+K I  E       F+ E   + +L H  LV L G C  E+  + LV+++ME+G L 
Sbjct: 53  KVAIKTIK-EGSMSEDDFIEEAEVMMKLSHPKLVQLYGVC-LEQAPICLVFEFMEHGCLS 110
Query: 451 KWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLG 510
            ++    G  + + E  + +  DV  G+ YL E     V+HRD+ + N L+ +    ++ 
Sbjct: 111 DYLRTQRG--LFAAETLLGMCLDVCEGMAYLEEAC---VIHRDLAARNCLVGENQVIKVS 165
Query: 511 DFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLS-GRRPI 569
           DFG+ R     Q  S+T     V + +PEVFS  R S+++DV+ FG+L+ EV S G+ P 
Sbjct: 166 DFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPY 225
Query: 570 E 570
           E
Sbjct: 226 E 226

>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed With Imidazo[1,5-A]quinoxaline Length = 267

Iteration: 1
 Score = 90.1 bits (222), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 60/181 (33%), Positives = 96/181 (53%), Gaps = 8/181 (4%)
Query: 391 EIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLD 450
           ++A+K I  E       F+ E   + +L H  LV L G C  E+  + LV ++ME+G L 
Sbjct: 34  KVAIKTI-REGAMSEEDFIEEAEVMMKLSHPKLVQLYGVC-LEQAPICLVTEFMEHGCLS 91
Query: 451 KWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLG 510
            ++    G  + + E  + +  DV  G+ YL E     V+HRD+ + N L+ +    ++ 
Sbjct: 92  DYLRTQRG--LFAAETLLGMCLDVCEGMAYLEEA---CVIHRDLAARNCLVGENQVIKVS 146
Query: 511 DFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLS-GRRPI 569
           DFG+ R     Q  S+T     V + +PEVFS  R S+++DV+ FG+L+ EV S G+ P 
Sbjct: 147 DFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPY 206
Query: 570 E 570
           E
Sbjct: 207 E 207

>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein Kinase Length = 333

Iteration: 1
 Score = 89.0 bits (219), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 54/167 (32%), Positives = 97/167 (58%), Gaps = 9/167 (5%)
Query: 408 FLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEER 467
           FL E   +G+  H +++ L G   + K  +M++ +YMENG+LDK++ + DG    S  + 
Sbjct: 93  FLGEAGIMGQFSHHNIIRLEGVISKYK-PMMIITEYMENGALDKFLREKDGE--FSVLQL 149
Query: 468 IRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTT 527
           + +L+ +AAG+ YL        +HRD+ + N+L++  +  ++ DFGL+R+      A+ T
Sbjct: 150 VGMLRGIAAGMKYLA---NMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYT 206
Query: 528 RVVGTVG--YLAPEVFSSGRASTQTDVFGFGILILEVLS-GRRPIEE 571
              G +   + APE  S  + ++ +DV+ FGI++ EV++ G RP  E
Sbjct: 207 TSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWE 253

>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:s768a Triple Mutant Length = 373

Iteration: 1
 Score = 88.2 bits (217), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 67/238 (28%), Positives = 117/238 (49%), Gaps = 23/238 (9%)
Query: 406 RAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCE 465
           R FL E S +G+  H +++ L G   + K  +M+V +YMENGSLD ++ + D    +   
Sbjct: 91  RDFLGEASIMGQFDHPNIIRLEGVVTKSK-PVMIVTEYMENGSLDSFLRKHDAQFTVI-- 147
Query: 466 ERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLAR-MHGHGQVA 524
           + + +L+ +A+G+ YL +      +HRD+ + N+L++  +  ++ DFGLAR +    + A
Sbjct: 148 QLVGMLRGIASGMKYLSD---MGYVHRDLAARNILINSNLVCKVSDFGLARVLEDDPEAA 204
Query: 525 STTRVVGT-VGYLAPEVFSSGRASTQTDVFGFGILILEVLS-GRRPIEEGKPNLVEMVWE 582
            TTR     + + +PE  +  + ++ +DV+ +GI++ EV+S G RP            WE
Sbjct: 205 YTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP-----------YWE 253
Query: 583 LMVQGKXXXXXXXXXXXKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLEGKI 640
           +  Q                   D    +  L L C   D   RP   Q+V +L+  I
Sbjct: 254 MSNQDVIKAVDEGYRLPP---PMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLI 308

>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8) Length = 325

Iteration: 1
 Score = 87.8 bits (216), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 58/167 (34%), Positives = 98/167 (58%), Gaps = 11/167 (6%)
Query: 406 RAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCE 465
           R FL+E S +G+  H +++ L G   R + + M+V +YMENGSLD ++   DG   +   
Sbjct: 95  RDFLSEASIMGQFDHPNIIRLEGVVTRGRLA-MIVTEYMENGSLDTFLRTHDGQFTIM-- 151
Query: 466 ERIRVLKDVAAGVLYLHE-GWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVA 524
           + + +L+ V AG+ YL + G+    +HRD+ + NVL+D  +  ++ DFGL+R+      A
Sbjct: 152 QLVGMLRGVGAGMRYLSDLGY----VHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDA 207
Query: 525 STTRVVGTVG--YLAPEVFSSGRASTQTDVFGFGILILEVLS-GRRP 568
           + T   G +   + APE  +    S+ +DV+ FG+++ EVL+ G RP
Sbjct: 208 AXTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERP 254

>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5) Length = 295

Iteration: 1
 Score = 87.8 bits (216), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 55/169 (32%), Positives = 100/169 (59%), Gaps = 9/169 (5%)
Query: 406 RAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCE 465
           R FL E S +G+  H +++ L G   + K  +M+V +YMENGSLD ++ + DG    +  
Sbjct: 68  RDFLGEASIMGQFDHPNIIHLEGVVTKSK-PVMIVTEYMENGSLDTFLKKNDGQ--FTVI 124
Query: 466 ERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLAR-MHGHGQVA 524
           + + +L+ ++AG+ YL +      +HRD+ + N+L++  +  ++ DFGL+R +    + A
Sbjct: 125 QLVGMLRGISAGMKYLSD---MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAA 181
Query: 525 STTRVVGT-VGYLAPEVFSSGRASTQTDVFGFGILILEVLS-GRRPIEE 571
            TTR     + + APE  +  + ++ +DV+ +GI++ EV+S G RP  E
Sbjct: 182 YTTRGGKIPIRWTAPEAIAFRKFTSASDVWSYGIVMWEVVSYGERPYWE 230

>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase Domain Of Human Lck, (Auto-Phosphorylated On Tyr394) Length = 285

Iteration: 1
 Score = 87.4 bits (215), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 52/182 (28%), Positives = 103/182 (56%), Gaps = 8/182 (4%)
Query: 388 GGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENG 447
           G  ++AVK +  +      AFLAE + + +L+H+ LV L     +E   + ++ +YMENG
Sbjct: 42  GHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQE--PIYIITEYMENG 98
Query: 448 SLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNG 507
           SL  ++    G + L+  + + +   +A G+ ++ E   +  +HRD++++N+L+   ++ 
Sbjct: 99  SLVDFLKTPSG-IKLTINKLLDMAAQIAEGMAFIEE---RNYIHRDLRAANILVSDTLSC 154
Query: 508 RLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLS-GR 566
           ++ DFGLAR+    +  +       + + APE  + G  + ++DV+ FGIL+ E+++ GR
Sbjct: 155 KIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGR 214
Query: 567 RP 568
            P
Sbjct: 215 IP 216

>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck In Complex With Non-selective And Src Family Selective Kinase Inhibitors Length = 279

Iteration: 1
 Score = 87.4 bits (215), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 52/182 (28%), Positives = 103/182 (56%), Gaps = 8/182 (4%)
Query: 388 GGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENG 447
           G  ++AVK +  +      AFLAE + + +L+H+ LV L     +E   + ++ +YMENG
Sbjct: 36  GHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQE--PIYIITEYMENG 92
Query: 448 SLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNG 507
           SL  ++    G + L+  + + +   +A G+ ++ E   +  +HRD++++N+L+   ++ 
Sbjct: 93  SLVDFLKTPSG-IKLTINKLLDMAAQIAEGMAFIEE---RNYIHRDLRAANILVSDTLSC 148
Query: 508 RLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLS-GR 566
           ++ DFGLAR+    +  +       + + APE  + G  + ++DV+ FGIL+ E+++ GR
Sbjct: 149 KIADFGLARLIEDAEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGR 208
Query: 567 RP 568
            P
Sbjct: 209 IP 210

>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule Inhibitor Length = 288

Iteration: 1
 Score = 87.4 bits (215), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 52/182 (28%), Positives = 103/182 (56%), Gaps = 8/182 (4%)
Query: 388 GGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENG 447
           G  ++AVK +  +      AFLAE + + +L+H+ LV L     +E   + ++ +YMENG
Sbjct: 45  GHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQE--PIYIITEYMENG 101
Query: 448 SLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNG 507
           SL  ++    G + L+  + + +   +A G+ ++ E   +  +HRD++++N+L+   ++ 
Sbjct: 102 SLVDFLKTPSG-IKLTINKLLDMAAQIAEGMAFIEE---RNYIHRDLRAANILVSDTLSC 157
Query: 508 RLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLS-GR 566
           ++ DFGLAR+    +  +       + + APE  + G  + ++DV+ FGIL+ E+++ GR
Sbjct: 158 KIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGR 217
Query: 567 RP 568
            P
Sbjct: 218 IP 219

>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8) Length = 325

Iteration: 1
 Score = 87.4 bits (215), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 58/167 (34%), Positives = 98/167 (58%), Gaps = 11/167 (6%)
Query: 406 RAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCE 465
           R FL+E S +G+  H +++ L G   R + + M+V +YMENGSLD ++   DG   +   
Sbjct: 95  RDFLSEASIMGQFDHPNIIRLEGVVTRGRLA-MIVTEYMENGSLDTFLRTHDGQFTIM-- 151
Query: 466 ERIRVLKDVAAGVLYLHE-GWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVA 524
           + + +L+ V AG+ YL + G+    +HRD+ + NVL+D  +  ++ DFGL+R+      A
Sbjct: 152 QLVGMLRGVGAGMRYLSDLGY----VHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDA 207
Query: 525 STTRVVGTVG--YLAPEVFSSGRASTQTDVFGFGILILEVLS-GRRP 568
           + T   G +   + APE  +    S+ +DV+ FG+++ EVL+ G RP
Sbjct: 208 AYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERP 254

>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule W259 Length = 287

Iteration: 1
 Score = 87.4 bits (215), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 52/182 (28%), Positives = 103/182 (56%), Gaps = 8/182 (4%)
Query: 388 GGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENG 447
           G  ++AVK +  +      AFLAE + + +L+H+ LV L     +E   + ++ +YMENG
Sbjct: 44  GHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQE--PIYIITEYMENG 100
Query: 448 SLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNG 507
           SL  ++    G + L+  + + +   +A G+ ++ E   +  +HRD++++N+L+   ++ 
Sbjct: 101 SLVDFLKTPSG-IKLTINKLLDMAAQIAEGMAFIEE---RNYIHRDLRAANILVSDTLSC 156
Query: 508 RLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLS-GR 566
           ++ DFGLAR+    +  +       + + APE  + G  + ++DV+ FGIL+ E+++ GR
Sbjct: 157 KIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGR 216
Query: 567 RP 568
            P
Sbjct: 217 IP 218

>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck In Complex With Non-Selective And Src Family Selective Kinase Inhibitors Length = 279

Iteration: 1
 Score = 87.4 bits (215), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 52/182 (28%), Positives = 103/182 (56%), Gaps = 8/182 (4%)
Query: 388 GGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENG 447
           G  ++AVK +  +      AFLAE + + +L+H+ LV L     +E   + ++ +YMENG
Sbjct: 36  GHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQE--PIYIITEYMENG 92
Query: 448 SLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNG 507
           SL  ++    G + L+  + + +   +A G+ ++ E   +  +HRD++++N+L+   ++ 
Sbjct: 93  SLVDFLKTPSG-IKLTINKLLDMAAQIAEGMAFIEE---RNYIHRDLRAANILVSDTLSC 148
Query: 508 RLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLS-GR 566
           ++ DFGLAR+    +  +       + + APE  + G  + ++DV+ FGIL+ E+++ GR
Sbjct: 149 KIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGR 208
Query: 567 RP 568
            P
Sbjct: 209 IP 210

>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck Length = 277

Iteration: 1
 Score = 87.4 bits (215), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 52/183 (28%), Positives = 103/183 (56%), Gaps = 8/183 (4%)
Query: 387 GGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMEN 446
            G  ++AVK +  +      AFLAE + + +L+H+ LV L     +E   + ++ +YMEN
Sbjct: 40  NGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQE--PIYIITEYMEN 96
Query: 447 GSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMN 506
           GSL  ++    G + L+  + + +   +A G+ ++ E   +  +HRD++++N+L+   ++
Sbjct: 97  GSLVDFLKTPSG-IKLTINKLLDMAAQIAEGMAFIEE---RNYIHRDLRAANILVSDTLS 152
Query: 507 GRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLS-G 565
            ++ DFGLAR+    +  +       + + APE  + G  + ++DV+ FGIL+ E+++ G
Sbjct: 153 CKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHG 212
Query: 566 RRP 568
           R P
Sbjct: 213 RIP 215

>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43 Bound To Lck Length = 273

Iteration: 1
 Score = 87.4 bits (215), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 52/183 (28%), Positives = 103/183 (56%), Gaps = 8/183 (4%)
Query: 387 GGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMEN 446
            G  ++AVK +  +      AFLAE + + +L+H+ LV L     +E   + ++ +YMEN
Sbjct: 37  NGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQE--PIYIITEYMEN 93
Query: 447 GSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMN 506
           GSL  ++    G + L+  + + +   +A G+ ++ E   +  +HRD++++N+L+   ++
Sbjct: 94  GSLVDFLKTPSG-IKLTINKLLDMAAQIAEGMAFIEE---RNYIHRDLRAANILVSDTLS 149
Query: 507 GRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLS-G 565
            ++ DFGLAR+    +  +       + + APE  + G  + ++DV+ FGIL+ E+++ G
Sbjct: 150 CKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHG 209
Query: 566 RRP 568
           R P
Sbjct: 210 RIP 212

>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b Length = 277

Iteration: 1
 Score = 87.4 bits (215), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 52/183 (28%), Positives = 103/183 (56%), Gaps = 8/183 (4%)
Query: 387 GGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMEN 446
            G  ++AVK +  +      AFLAE + + +L+H+ LV L     +E   + ++ +YMEN
Sbjct: 41  NGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQE--PIYIITEYMEN 97
Query: 447 GSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMN 506
           GSL  ++    G + L+  + + +   +A G+ ++ E   +  +HRD++++N+L+   ++
Sbjct: 98  GSLVDFLKTPSG-IKLTINKLLDMAAQIAEGMAFIEE---RNYIHRDLRAANILVSDTLS 153
Query: 507 GRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLS-G 565
            ++ DFGLAR+    +  +       + + APE  + G  + ++DV+ FGIL+ E+++ G
Sbjct: 154 CKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHG 213
Query: 566 RRP 568
           R P
Sbjct: 214 RIP 216

>pdb|2PL0|A Chain A, Lck Bound To Imatinib Length = 289

Iteration: 1
 Score = 87.4 bits (215), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 52/182 (28%), Positives = 103/182 (56%), Gaps = 8/182 (4%)
Query: 388 GGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENG 447
           G  ++AVK +  +      AFLAE + + +L+H+ LV L     +E   + ++ +YMENG
Sbjct: 46  GHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQE--PIYIITEYMENG 102
Query: 448 SLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNG 507
           SL  ++    G + L+  + + +   +A G+ ++ E   +  +HRD++++N+L+   ++ 
Sbjct: 103 SLVDFLKTPSG-IKLTINKLLDMAAQIAEGMAFIEE---RNYIHRDLRAANILVSDTLSC 158
Query: 508 RLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLS-GR 566
           ++ DFGLAR+    +  +       + + APE  + G  + ++DV+ FGIL+ E+++ GR
Sbjct: 159 KIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGR 218
Query: 567 RP 568
            P
Sbjct: 219 IP 220

>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck Length = 271

Iteration: 1
 Score = 87.0 bits (214), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 52/183 (28%), Positives = 103/183 (56%), Gaps = 8/183 (4%)
Query: 387 GGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMEN 446
            G  ++AVK +  +      AFLAE + + +L+H+ LV L     +E   + ++ +YMEN
Sbjct: 35  NGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQE--PIYIITEYMEN 91
Query: 447 GSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMN 506
           GSL  ++    G + L+  + + +   +A G+ ++ E   +  +HRD++++N+L+   ++
Sbjct: 92  GSLVDFLKTPSG-IKLTINKLLDMAAQIAEGMAFIEE---RNYIHRDLRAANILVSDTLS 147
Query: 507 GRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLS-G 565
            ++ DFGLAR+    +  +       + + APE  + G  + ++DV+ FGIL+ E+++ G
Sbjct: 148 CKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHG 207
Query: 566 RRP 568
           R P
Sbjct: 208 RIP 210

>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck), Activated Form (Auto-Phosphorylated On Tyr394) Length = 271

Iteration: 1
 Score = 87.0 bits (214), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 52/183 (28%), Positives = 103/183 (56%), Gaps = 8/183 (4%)
Query: 387 GGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMEN 446
            G  ++AVK +  +      AFLAE + + +L+H+ LV L     +E   + ++ +YMEN
Sbjct: 35  NGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQE--PIYIITEYMEN 91
Query: 447 GSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMN 506
           GSL  ++    G + L+  + + +   +A G+ ++ E   +  +HRD++++N+L+   ++
Sbjct: 92  GSLVDFLKTPSG-IKLTINKLLDMAAQIAEGMAFIEE---RNYIHRDLRAANILVSDTLS 147
Query: 507 GRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLS-G 565
            ++ DFGLAR+    +  +       + + APE  + G  + ++DV+ FGIL+ E+++ G
Sbjct: 148 CKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHG 207
Query: 566 RRP 568
           R P
Sbjct: 208 RIP 210

>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1 Bound To Lck Length = 272

Iteration: 1
 Score = 87.0 bits (214), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 52/183 (28%), Positives = 103/183 (56%), Gaps = 8/183 (4%)
Query: 387 GGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMEN 446
            G  ++AVK +  +      AFLAE + + +L+H+ LV L     +E   + ++ +YMEN
Sbjct: 36  NGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQE--PIYIITEYMEN 92
Query: 447 GSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMN 506
           GSL  ++    G + L+  + + +   +A G+ ++ E   +  +HRD++++N+L+   ++
Sbjct: 93  GSLVDFLKTPSG-IKLTINKLLDMAAQIAEGMAFIEE---RNYIHRDLRAANILVSDTLS 148
Query: 507 GRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLS-G 565
            ++ DFGLAR+    +  +       + + APE  + G  + ++DV+ FGIL+ E+++ G
Sbjct: 149 CKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHG 208
Query: 566 RRP 568
           R P
Sbjct: 209 RIP 211

>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:y742f Triple Mutant Length = 373

Iteration: 1
 Score = 87.0 bits (214), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 66/238 (27%), Positives = 117/238 (49%), Gaps = 23/238 (9%)
Query: 406 RAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCE 465
           R FL E S +G+  H +++ L G   + K  +M+V +YMENGSLD ++ + D    +   
Sbjct: 91  RDFLGEASIMGQFDHPNIIRLEGVVTKSK-PVMIVTEYMENGSLDSFLRKHDAQFTVI-- 147
Query: 466 ERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLAR-MHGHGQVA 524
           + + +L+ +A+G+ YL +      +HRD+ + N+L++  +  ++ DFGL+R +    + A
Sbjct: 148 QLVGMLRGIASGMKYLSD---MGFVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAA 204
Query: 525 STTRVVGT-VGYLAPEVFSSGRASTQTDVFGFGILILEVLS-GRRPIEEGKPNLVEMVWE 582
            TTR     + + +PE  +  + ++ +DV+ +GI++ EV+S G RP            WE
Sbjct: 205 YTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP-----------YWE 253
Query: 583 LMVQGKXXXXXXXXXXXKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLEGKI 640
           +  Q                   D    +  L L C   D   RP   Q+V +L+  I
Sbjct: 254 MSNQDVIKAVDEGYRLPP---PMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLI 308

>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To Substrate Kqwdnye[ptyr]iw Length = 371

Iteration: 1
 Score = 87.0 bits (214), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 66/238 (27%), Positives = 118/238 (49%), Gaps = 23/238 (9%)
Query: 406 RAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCE 465
           R FL E S +G+  H +++ L G   + K  +M+V +YMENGSLD ++ + D    +   
Sbjct: 89  RDFLGEASIMGQFDHPNIIRLEGVVTKSK-PVMIVTEYMENGSLDSFLRKHDAQFTVI-- 145
Query: 466 ERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLAR-MHGHGQVA 524
           + + +L+ +A+G+ YL +      +HRD+ + N+L++  +  ++ DFGL+R +    + A
Sbjct: 146 QLVGMLRGIASGMKYLSD---MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAA 202
Query: 525 STTRVVGT-VGYLAPEVFSSGRASTQTDVFGFGILILEVLS-GRRPIEEGKPNLVEMVWE 582
            TTR     + + +PE  +  + ++ +DV+ +GI++ EV+S G RP            WE
Sbjct: 203 YTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP-----------YWE 251
Query: 583 LMVQGKXXXXXXXXXXXKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLEGKI 640
           +  Q             +     D    +  L L C   D   RP   Q+V +L+  I
Sbjct: 252 MSNQD---VIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLI 306

>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f Double Mutant Length = 373

Iteration: 1
 Score = 87.0 bits (214), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 66/238 (27%), Positives = 117/238 (49%), Gaps = 23/238 (9%)
Query: 406 RAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCE 465
           R FL E S +G+  H +++ L G   + K  +M+V +YMENGSLD ++ + D    +   
Sbjct: 91  RDFLGEASIMGQFDHPNIIRLEGVVTKSK-PVMIVTEYMENGSLDSFLRKHDAQFTVI-- 147
Query: 466 ERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLAR-MHGHGQVA 524
           + + +L+ +A+G+ YL +      +HRD+ + N+L++  +  ++ DFGL+R +    + A
Sbjct: 148 QLVGMLRGIASGMKYLSD---MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAA 204
Query: 525 STTRVVGT-VGYLAPEVFSSGRASTQTDVFGFGILILEVLS-GRRPIEEGKPNLVEMVWE 582
            TTR     + + +PE  +  + ++ +DV+ +GI++ EV+S G RP            WE
Sbjct: 205 YTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP-----------YWE 253
Query: 583 LMVQGKXXXXXXXXXXXKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLEGKI 640
           +  Q                   D    +  L L C   D   RP   Q+V +L+  I
Sbjct: 254 MSNQDVIKAVDEGYRLPP---PMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLI 308

>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck Length = 265

Iteration: 1
 Score = 87.0 bits (214), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 52/182 (28%), Positives = 103/182 (56%), Gaps = 8/182 (4%)
Query: 388 GGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENG 447
           G  ++AVK +  +      AFLAE + + +L+H+ LV L     +E   + ++ +YMENG
Sbjct: 31  GHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQE--PIYIITEYMENG 87
Query: 448 SLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNG 507
           SL  ++    G + L+  + + +   +A G+ ++ E   +  +HRD++++N+L+   ++ 
Sbjct: 88  SLVDFLKTPSG-IKLTINKLLDMAAQIAEGMAFIEE---RNYIHRDLRAANILVSDTLSC 143
Query: 508 RLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLS-GR 566
           ++ DFGLAR+    +  +       + + APE  + G  + ++DV+ FGIL+ E+++ GR
Sbjct: 144 KIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGR 203
Query: 567 RP 568
            P
Sbjct: 204 IP 205

>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant Length = 373

Iteration: 1
 Score = 86.7 bits (213), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 66/238 (27%), Positives = 117/238 (49%), Gaps = 23/238 (9%)
Query: 406 RAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCE 465
           R FL E S +G+  H +++ L G   + K  +M+V +YMENGSLD ++ + D    +   
Sbjct: 91  RDFLGEASIMGQFDHPNIIRLEGVVTKSK-PVMIVTEYMENGSLDSFLRKHDAQFTVI-- 147
Query: 466 ERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLAR-MHGHGQVA 524
           + + +L+ +A+G+ YL +      +HRD+ + N+L++  +  ++ DFGL+R +    + A
Sbjct: 148 QLVGMLRGIASGMKYLSD---MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAA 204
Query: 525 STTRVVGT-VGYLAPEVFSSGRASTQTDVFGFGILILEVLS-GRRPIEEGKPNLVEMVWE 582
            TTR     + + +PE  +  + ++ +DV+ +GI++ EV+S G RP            WE
Sbjct: 205 YTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP-----------YWE 253
Query: 583 LMVQGKXXXXXXXXXXXKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLEGKI 640
           +  Q                   D    +  L L C   D   RP   Q+V +L+  I
Sbjct: 254 MSNQDVIKAVDEGYRLPP---PMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLI 308

>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant Length = 373

Iteration: 1
 Score = 86.7 bits (213), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 66/238 (27%), Positives = 117/238 (49%), Gaps = 23/238 (9%)
Query: 406 RAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCE 465
           R FL E S +G+  H +++ L G   + K  +M+V +YMENGSLD ++ + D    +   
Sbjct: 91  RDFLGEASIMGQFDHPNIIRLEGVVTKSK-PVMIVTEYMENGSLDSFLRKHDAQFTVI-- 147
Query: 466 ERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLAR-MHGHGQVA 524
           + + +L+ +A+G+ YL +      +HRD+ + N+L++  +  ++ DFGL+R +    + A
Sbjct: 148 QLVGMLRGIASGMKYLSD---MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAA 204
Query: 525 STTRVVGT-VGYLAPEVFSSGRASTQTDVFGFGILILEVLS-GRRPIEEGKPNLVEMVWE 582
            TTR     + + +PE  +  + ++ +DV+ +GI++ EV+S G RP            WE
Sbjct: 205 YTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP-----------YWE 253
Query: 583 LMVQGKXXXXXXXXXXXKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLEGKI 640
           +  Q                   D    +  L L C   D   RP   Q+V +L+  I
Sbjct: 254 MSNQDVIKAVDEGYRLPP---PMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLI 308

>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound Structure Length = 344

Iteration: 1
 Score = 86.7 bits (213), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 66/238 (27%), Positives = 117/238 (49%), Gaps = 23/238 (9%)
Query: 406 RAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCE 465
           R FL E S +G+  H +++ L G   + K  +M+V +YMENGSLD ++ + D    +   
Sbjct: 62  RDFLGEASIMGQFDHPNIIRLEGVVTKSK-PVMIVTEYMENGSLDSFLRKHDAQFTVI-- 118
Query: 466 ERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLAR-MHGHGQVA 524
           + + +L+ +A+G+ YL +      +HRD+ + N+L++  +  ++ DFGL+R +    + A
Sbjct: 119 QLVGMLRGIASGMKYLSD---MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAA 175
Query: 525 STTRVVGT-VGYLAPEVFSSGRASTQTDVFGFGILILEVLS-GRRPIEEGKPNLVEMVWE 582
            TTR     + + +PE  +  + ++ +DV+ +GI++ EV+S G RP            WE
Sbjct: 176 YTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP-----------YWE 224
Query: 583 LMVQGKXXXXXXXXXXXKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLEGKI 640
           +  Q                   D    +  L L C   D   RP   Q+V +L+  I
Sbjct: 225 MSNQDVIKAVDEGYRLPP---PMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLI 279

>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane Region Length = 373

Iteration: 1
 Score = 86.7 bits (213), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 66/238 (27%), Positives = 117/238 (49%), Gaps = 23/238 (9%)
Query: 406 RAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCE 465
           R FL E S +G+  H +++ L G   + K  +M+V +YMENGSLD ++ + D    +   
Sbjct: 91  RDFLGEASIMGQFDHPNIIRLEGVVTKSK-PVMIVTEYMENGSLDSFLRKHDAQFTVI-- 147
Query: 466 ERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLAR-MHGHGQVA 524
           + + +L+ +A+G+ YL +      +HRD+ + N+L++  +  ++ DFGL+R +    + A
Sbjct: 148 QLVGMLRGIASGMKYLSD---MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAA 204
Query: 525 STTRVVGT-VGYLAPEVFSSGRASTQTDVFGFGILILEVLS-GRRPIEEGKPNLVEMVWE 582
            TTR     + + +PE  +  + ++ +DV+ +GI++ EV+S G RP            WE
Sbjct: 205 YTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP-----------YWE 253
Query: 583 LMVQGKXXXXXXXXXXXKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLEGKI 640
           +  Q                   D    +  L L C   D   RP   Q+V +L+  I
Sbjct: 254 MSNQDVIKAVDEGYRLPP---PMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLI 308

>pdb|2FMD|A Chain A, Structural Basis Of Carbohydrate Recognition By Bowringia Milbraedii Seed Agglutinin Length = 240

Iteration: 1
 Score = 86.7 bits (213), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 78/259 (30%), Positives = 115/259 (44%), Gaps = 40/259 (15%)
Query: 25  AVDFVFNGFNS--SNLSLYGTATVES-RILTLT------NSTTFTIGRALYPSKIPTKRP 75
           +V F F  F S   +L   G A+V S + L LT      N    ++GRALY + I   + 
Sbjct: 3   SVCFTFTDFESGQQDLIFQGDASVGSNKALQLTKVDSKGNPQGGSVGRALYTAPIRLWQ- 61
Query: 76  NSSYVYPFSTSFIFAMAPYKGVLAGHGLVFLFVPFHGIKGATEAQHLGLFNRTNDGNSSN 135
           +SS V  F T+F F+++      A     F+  P   I   +  + LGLF  +N+  S N
Sbjct: 62  SSSLVASFETTFTFSISQGSSTPADALTFFIASPDTKIPSGSGGRLLGLFGSSNNAGSDN 121
Query: 136 HVFGVEFDVFKNQEFNDIDENHVGIDVNSLTSVSAHAAGYWPDNQXXXXXXXXXXXXXXX 195
            V  VEFD + N +  D +  H+GIDVNS+ S    AA  W                   
Sbjct: 122 GVVSVEFDTYPNTDIGDPNYRHIGIDVNSIRS---KAASKW------------------- 159
Query: 196 EKSFKELKLNNGKNYQVWIDYADSFINITMVEAGMKRPKRPLLSVPLNLSGVLEDEMYVG 255
                     NGK     I Y  +   +++V +        ++S  + L+ V    + VG
Sbjct: 160 -------DWQNGKTATAHISYNSASKRLSVVSS-YPNSSPVVVSFDVELNNVXPXWVRVG 211
Query: 256 FTAATGQLVESHKILAWSF 274
           F+A TGQ  +++ ILAWSF
Sbjct: 212 FSATTGQYTQTNNILAWSF 230

>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor Awl-Ii- 38.3 Length = 361

Iteration: 1
 Score = 86.7 bits (213), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 66/238 (27%), Positives = 117/238 (49%), Gaps = 23/238 (9%)
Query: 406 RAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCE 465
           R FL E S +G+  H +++ L G   + K  +M+V +YMENGSLD ++ + D     +  
Sbjct: 79  RDFLGEASIMGQFDHPNIIRLEGVVTKSK-PVMIVTEYMENGSLDSFLRKHDAQ--FTVI 135
Query: 466 ERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLAR-MHGHGQVA 524
           + + +L+ +A+G+ YL +      +HRD+ + N+L++  +  ++ DFGL+R +    + A
Sbjct: 136 QLVGMLRGIASGMKYLSD---MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAA 192
Query: 525 STTRVVGT-VGYLAPEVFSSGRASTQTDVFGFGILILEVLS-GRRPIEEGKPNLVEMVWE 582
            TTR     + + +PE  +  + ++ +DV+ +GI++ EV+S G RP            WE
Sbjct: 193 YTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP-----------YWE 241
Query: 583 LMVQGKXXXXXXXXXXXKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLEGKI 640
           +  Q                   D    +  L L C   D   RP   Q+V +L+  I
Sbjct: 242 MSNQDVIKAVDEGYRLPP---PMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLI 296

>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7) Length = 318

Iteration: 1
 Score = 86.7 bits (213), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 55/166 (33%), Positives = 96/166 (57%), Gaps = 9/166 (5%)
Query: 406 RAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCE 465
           R FL E S +G+  H ++V L G   R K  +M+V ++MENG+LD ++ + DG   +   
Sbjct: 89  RDFLCEASIMGQFDHPNVVHLEGVVTRGK-PVMIVIEFMENGALDAFLRKHDGQFTVI-- 145
Query: 466 ERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVAS 525
           + + +L+ +AAG+ YL +      +HRD+ + N+L++  +  ++ DFGL+R+      A 
Sbjct: 146 QLVGMLRGIAAGMRYLAD---MGYVHRDLAARNILVNSNLVCKVSDFGLSRVIEDDPEAV 202
Query: 526 TTRVVGT--VGYLAPEVFSSGRASTQTDVFGFGILILEVLS-GRRP 568
            T   G   V + APE     + ++ +DV+ +GI++ EV+S G RP
Sbjct: 203 YTTTGGKIPVRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERP 248

>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596:y602:s768g Triple Mutant Length = 373

Iteration: 1
 Score = 86.3 bits (212), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 66/238 (27%), Positives = 116/238 (48%), Gaps = 23/238 (9%)
Query: 406 RAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCE 465
           R FL E S +G+  H +++ L G   + K  +M+V +YMENGSLD ++ + D    +   
Sbjct: 91  RDFLGEASIMGQFDHPNIIRLEGVVTKSK-PVMIVTEYMENGSLDSFLRKHDAQFTVI-- 147
Query: 466 ERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLAR-MHGHGQVA 524
           + + +L+ +A+G+ YL +      +HRD+ + N+L++  +  ++ DFGL R +    + A
Sbjct: 148 QLVGMLRGIASGMKYLSD---MGYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAA 204
Query: 525 STTRVVGT-VGYLAPEVFSSGRASTQTDVFGFGILILEVLS-GRRPIEEGKPNLVEMVWE 582
            TTR     + + +PE  +  + ++ +DV+ +GI++ EV+S G RP            WE
Sbjct: 205 YTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP-----------YWE 253
Query: 583 LMVQGKXXXXXXXXXXXKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLEGKI 640
           +  Q                   D    +  L L C   D   RP   Q+V +L+  I
Sbjct: 254 MSNQDVIKAVDEGYRLPP---PMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLI 308

>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a) Length = 306

Iteration: 1
 Score = 86.3 bits (212), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 52/171 (30%), Positives = 100/171 (58%), Gaps = 9/171 (5%)
Query: 401 NDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSM 460
            D   R FL+E S +G+  H +++ L G   + K  +M++ +YMENGSLD ++ + DG  
Sbjct: 70  TDKQRRDFLSEASIMGQFDHPNIIHLEGVVTKCK-PVMIITEYMENGSLDAFLRKNDGRF 128
Query: 461 MLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLAR-MHG 519
            +   + + +L+ + +G+ YL    +   +HRD+ + N+L++  +  ++ DFG++R +  
Sbjct: 129 TVI--QLVGMLRGIGSGMKYLS---DMSAVHRDLAARNILVNSNLVCKVSDFGMSRVLED 183
Query: 520 HGQVASTTRVVGT-VGYLAPEVFSSGRASTQTDVFGFGILILEVLS-GRRP 568
             + A TTR     + + APE  +  + ++ +DV+ +GI++ EV+S G RP
Sbjct: 184 DPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERP 234

>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor Tyrosine Kinase And Juxtamembrane Region Length = 312

Iteration: 1
 Score = 85.9 bits (211), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 51/168 (30%), Positives = 97/168 (57%), Gaps = 11/168 (6%)
Query: 406 RAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCE 465
           R FL+E S +G+  H +++ L G   +    +M++ ++MENGSLD ++ Q DG    +  
Sbjct: 79  RDFLSEASIMGQFDHPNVIHLEGVVTKST-PVMIITEFMENGSLDSFLRQNDGQ--FTVI 135
Query: 466 ERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLAR-MHGHGQVA 524
           + + +L+ +AAG+ YL    +   +HRD+ + N+L++  +  ++ DFGL+R +       
Sbjct: 136 QLVGMLRGIAAGMKYLA---DMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDP 192
Query: 525 STTRVVG---TVGYLAPEVFSSGRASTQTDVFGFGILILEVLS-GRRP 568
           + T  +G    + + APE     + ++ +DV+ +GI++ EV+S G RP
Sbjct: 193 TYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERP 240

>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine Length = 267

Iteration: 1
 Score = 85.1 bits (209), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 51/182 (28%), Positives = 103/182 (56%), Gaps = 8/182 (4%)
Query: 388 GGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENG 447
           G  ++AVK +  +      AFLAE + + +L+H+ LV L     +E   + ++ +YMENG
Sbjct: 32  GHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQE--PIYIITEYMENG 88
Query: 448 SLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNG 507
           SL  ++    G + L+  + + +   +A G+ ++ E   +  +HR+++++N+L+   ++ 
Sbjct: 89  SLVDFLKTPSG-IKLTINKLLDMAAQIAEGMAFIEE---RNYIHRNLRAANILVSDTLSC 144
Query: 508 RLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLS-GR 566
           ++ DFGLAR+    +  +       + + APE  + G  + ++DV+ FGIL+ E+++ GR
Sbjct: 145 KIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGR 204
Query: 567 RP 568
            P
Sbjct: 205 IP 206

>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain Length = 291

Iteration: 1
 Score = 85.1 bits (209), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 52/171 (30%), Positives = 100/171 (58%), Gaps = 9/171 (5%)
Query: 401 NDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSM 460
            D   R FL+E S +G+  H +++ L G   + K  +M++ +YMENGSLD ++ + DG  
Sbjct: 55  TDKQRRDFLSEASIMGQFDHPNIIHLEGVVTKCK-PVMIITEYMENGSLDAFLRKNDGRF 113
Query: 461 MLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLAR-MHG 519
            +   + + +L+ + +G+ YL    +   +HRD+ + N+L++  +  ++ DFG++R +  
Sbjct: 114 TVI--QLVGMLRGIGSGMKYLS---DMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLED 168
Query: 520 HGQVASTTRVVGT-VGYLAPEVFSSGRASTQTDVFGFGILILEVLS-GRRP 568
             + A TTR     + + APE  +  + ++ +DV+ +GI++ EV+S G RP
Sbjct: 169 DPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERP 219

>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With Vuf 12058 Length = 285

Iteration: 1
 Score = 85.1 bits (209), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 52/171 (30%), Positives = 100/171 (58%), Gaps = 9/171 (5%)
Query: 401 NDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSM 460
            D   R FL+E S +G+  H +++ L G   + K  +M++ +YMENGSLD ++ + DG  
Sbjct: 49  TDKQRRDFLSEASIMGQFDHPNIIHLEGVVTKCK-PVMIITEYMENGSLDAFLRKNDGRF 107
Query: 461 MLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLAR-MHG 519
            +   + + +L+ + +G+ YL    +   +HRD+ + N+L++  +  ++ DFG++R +  
Sbjct: 108 TVI--QLVGMLRGIGSGMKYLS---DMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLED 162
Query: 520 HGQVASTTRVVGT-VGYLAPEVFSSGRASTQTDVFGFGILILEVLS-GRRP 568
             + A TTR     + + APE  +  + ++ +DV+ +GI++ EV+S G RP
Sbjct: 163 DPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERP 213

>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1) Length = 350

Iteration: 1
 Score = 84.7 bits (208), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 60/188 (31%), Positives = 98/188 (52%), Gaps = 10/188 (5%)
Query: 391 EIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLD 450
           EI + R+S +    +R    E++ L  +KH ++V  R   + E GSL +V DY E G L 
Sbjct: 56  EINISRMSSKEREESRR---EVAVLANMKHPNIVQYRESFE-ENGSLYIVMDYCEGGDLF 111
Query: 451 KWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLG 510
           K I    G +     +  ++L       L L    ++K+LHRDIKS N+ L K+   +LG
Sbjct: 112 KRINAQKGVLF----QEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLTKDGTVQLG 167
Query: 511 DFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIE 570
           DFG+AR+  +  V      +GT  YL+PE+  +   + ++D++  G ++ E+ + +   E
Sbjct: 168 DFGIARVL-NSTVELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFE 226
Query: 571 EGK-PNLV 577
            G   NLV
Sbjct: 227 AGSMKNLV 234

>pdb|1LUL|A Chain A, Db58, A Legume Lectin From Dolichos Biflorus Length = 253

Iteration: 1
 Score = 84.3 bits (207), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 79/262 (30%), Positives = 123/262 (46%), Gaps = 49/262 (18%)
Query: 28  FVFNGFNSSNLSLYGTATVESRILTLTN------STTFTIGRALYPSKIPTKRPNSSYVY 81
           F F  FNSS+  L G ATV S  L LT        T  ++GRA Y S I     ++  V 
Sbjct: 6   FSFKNFNSSSFILQGDATVSSSKLRLTKVKGNGLPTLSSLGRAFYSSPIQIYDKSTGAVA 65
Query: 82  PFSTSFIFAM-APYKGVLAGHGLVFLFVPFHGIKGATEAQHLGLFNRTNDGNSSNHVFGV 140
            ++TSF   + AP K   A  G+ F  VP  G +  + +  LG+F+     NS+  V  V
Sbjct: 66  SWATSFTANIFAPNKSSSA-DGIAFALVPV-GSEPKSNSGFLGVFDSDVYDNSAQTV-AV 122
Query: 141 EFDVFKNQEFNDIDENHVGIDVNSLTSVSAHAAGYWPDNQXXXXXXXXXXXXXXXEKSFK 200
           EFD F N ++ D    H+GIDVNS+ S+   + G                          
Sbjct: 123 EFDTFSNTDW-DPTSRHIGIDVNSIKSIRTASWG-------------------------- 155
Query: 201 ELKLNNGKNYQVWIDYADSFINITMVEAGMKRPKRP---LLSVPLNLSGVLEDEMYVGFT 257
              L NG+N ++ I Y  +    +++ A +  P R    ++S  ++++  L + + +GF+
Sbjct: 156 ---LANGQNAEILITYNAA---TSLLVASLVHPSRRTSYIVSERVDITNELPEYVSIGFS 209
Query: 258 AATG---QLVESHKILAWSFSN 276
           A TG      E+H +L+WSF++
Sbjct: 210 ATTGLSEGYTETHDVLSWSFAS 231

>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:y742a Triple Mutant Length = 373

Iteration: 1
 Score = 84.3 bits (207), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 65/238 (27%), Positives = 116/238 (48%), Gaps = 23/238 (9%)
Query: 406 RAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCE 465
           R FL E S +G+  H +++ L G   + K  +M+V + MENGSLD ++ + D    +   
Sbjct: 91  RDFLGEASIMGQFDHPNIIRLEGVVTKSK-PVMIVTEXMENGSLDSFLRKHDAQFTVI-- 147
Query: 466 ERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLAR-MHGHGQVA 524
           + + +L+ +A+G+ YL +      +HRD+ + N+L++  +  ++ DFGL+R +    + A
Sbjct: 148 QLVGMLRGIASGMKYLSD---MGAVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAA 204
Query: 525 STTRVVGT-VGYLAPEVFSSGRASTQTDVFGFGILILEVLS-GRRPIEEGKPNLVEMVWE 582
            TTR     + + +PE  +  + ++ +DV+ +GI++ EV+S G RP            WE
Sbjct: 205 YTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP-----------YWE 253
Query: 583 LMVQGKXXXXXXXXXXXKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLEGKI 640
           +  Q                   D    +  L L C   D   RP   Q+V +L+  I
Sbjct: 254 MSNQDVIKAVDEGYRLPP---PMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLI 308

>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Dephosphorylated, Amp-Pnp Bound Length = 373

Iteration: 1
 Score = 83.6 bits (205), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 65/238 (27%), Positives = 116/238 (48%), Gaps = 23/238 (9%)
Query: 406 RAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCE 465
           R FL E S +G+  H +++ L G   + K  +M+V + MENGSLD ++ + D    +   
Sbjct: 91  RDFLGEASIMGQFDHPNIIRLEGVVTKSK-PVMIVTEXMENGSLDSFLRKHDAQFTVI-- 147
Query: 466 ERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLAR-MHGHGQVA 524
           + + +L+ +A+G+ YL +      +HRD+ + N+L++  +  ++ DFGL+R +    + A
Sbjct: 148 QLVGMLRGIASGMKYLSD---MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAA 204
Query: 525 STTRVVGT-VGYLAPEVFSSGRASTQTDVFGFGILILEVLS-GRRPIEEGKPNLVEMVWE 582
            TTR     + + +PE  +  + ++ +DV+ +GI++ EV+S G RP            WE
Sbjct: 205 YTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP-----------YWE 253
Query: 583 LMVQGKXXXXXXXXXXXKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLEGKI 640
           +  Q                   D    +  L L C   D   RP   Q+V +L+  I
Sbjct: 254 MSNQDVIKAVDEGYRLPP---PMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLI 308

>pdb|1FAT|A Chain A, Phytohemagglutinin-L Length = 252

Iteration: 1
 Score = 83.6 bits (205), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 87/277 (31%), Positives = 126/277 (45%), Gaps = 55/277 (19%)
Query: 28  FVFNGFNSSNLSLYGTATVESR-ILTLTN------STTFTIGRALYPSKIPTKRPNSSYV 80
           F F  FN +NL L   A+V S   L LTN          ++GRA Y + I      +  V
Sbjct: 6   FNFQRFNETNLILQRDASVSSSGQLRLTNLNGNGEPRVGSLGRAFYSAPIQIWDNTTGTV 65
Query: 81  YPFSTSFIFAMAPYKGVLAGHGLVFLFVPFHGIKGATEAQHLGLFNRTNDGNSSN-HVFG 139
             F+TSF F +          GL F  VP  G +   +   LGLF    DG++SN H   
Sbjct: 66  ASFATSFTFNIQVPNNAGPADGLAFALVPV-GSQPKDKGGFLGLF----DGSNSNFHTVA 120
Query: 140 VEFDVFKNQEFNDIDENHVGIDVNSLTSVSAHAAGYWPDNQXXXXXXXXXXXXXXXEKSF 199
           VEFD   N+++ D  E H+GIDVNS+ S+                               
Sbjct: 121 VEFDTLYNKDW-DPTERHIGIDVNSIRSIKT----------------------------- 150
Query: 200 KELKLNNGKNYQVWIDYADSFINITMVEAGMKRPKRP---LLSVPLNLSGVLEDEMYVGF 256
                 NG+N +V I Y DS  N+ +  A +  P +    ++S  ++L  VL + + VGF
Sbjct: 151 TRWDFVNGENAEVLITY-DSSTNLLV--ASLVYPSQKTSFIVSDTVDLKSVLPEWVSVGF 207
Query: 257 TAATG---QLVESHKILAWSFSNTKFSLSEELITSGL 290
           +A TG     VE++ +L+WSF++    LS+E  + GL
Sbjct: 208 SATTGINKGNVETNDVLSWSFAS---KLSDETTSEGL 241

>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure Length = 344

Iteration: 1
 Score = 83.6 bits (205), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 65/238 (27%), Positives = 117/238 (49%), Gaps = 23/238 (9%)
Query: 406 RAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCE 465
           R FL E S +G+  H +++ L G   + K  +M+V + MENGSLD ++ + D    +   
Sbjct: 62  RDFLGEASIMGQFDHPNIIRLEGVVTKSK-PVMIVTEXMENGSLDSFLRKHDAQFTVI-- 118
Query: 466 ERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLAR-MHGHGQVA 524
           + + +L+ +A+G+ YL +      +HRD+ + N+L++  +  ++ DFGL+R +    + A
Sbjct: 119 QLVGMLRGIASGMKYLSD---MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAA 175
Query: 525 STTRVVGT-VGYLAPEVFSSGRASTQTDVFGFGILILEVLS-GRRPIEEGKPNLVEMVWE 582
            TTR     + + +PE  +  + ++ +DV+ +GI++ EV+S G RP            WE
Sbjct: 176 YTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP-----------YWE 224
Query: 583 LMVQGKXXXXXXXXXXXKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLEGKI 640
           +  Q             +     D    +  L L C   D   RP   Q+V +L+  I
Sbjct: 225 MSNQD---VIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLI 279

>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta (I4122) Length = 677

Iteration: 1
 Score = 82.8 bits (203), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 63/210 (30%), Positives = 104/210 (49%), Gaps = 19/210 (9%)
Query: 389 GAEIAVKRISHENDGGTRA-FLAEISSLGRLKHKSLVGLR----GWCKREKGSL-MLVYD 442
           G ++A+K+   E     R  +  EI  + +L H ++V  R    G  K     L +L  +
Sbjct: 40  GEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDLPLLAME 99
Query: 443 YMENGSLDKWIFQCDGSMMLSCEERIR-VLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLL 501
           Y E G L K++ Q +    L  E  IR +L D+++ + YLHE    +++HRD+K  N++L
Sbjct: 100 YCEGGDLRKYLNQFENCCGLK-EGPIRTLLSDISSALRYLHEN---RIIHRDLKPENIVL 155
Query: 502 D---KEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGIL 558
               + +  ++ D G A+    G++   T  VGT+ YLAPE+    + +   D + FG L
Sbjct: 156 QPGPQRLIHKIIDLGYAKELDQGELC--TEFVGTLQYLAPELLEQKKYTVTVDYWSFGTL 213
Query: 559 ILEVLSGRRPIEEGKPNLVEMVWELMVQGK 588
             E ++G RP     PN   + W   V+ K
Sbjct: 214 AFECITGFRPF---LPNWQPVQWHGKVREK 240

>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta Length = 676

Iteration: 1
 Score = 82.8 bits (203), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 63/210 (30%), Positives = 104/210 (49%), Gaps = 19/210 (9%)
Query: 389 GAEIAVKRISHENDGGTRA-FLAEISSLGRLKHKSLVGLR----GWCKREKGSL-MLVYD 442
           G ++A+K+   E     R  +  EI  + +L H ++V  R    G  K     L +L  +
Sbjct: 39  GEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDLPLLAME 98
Query: 443 YMENGSLDKWIFQCDGSMMLSCEERIR-VLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLL 501
           Y E G L K++ Q +    L  E  IR +L D+++ + YLHE    +++HRD+K  N++L
Sbjct: 99  YCEGGDLRKYLNQFENCCGLK-EGPIRTLLSDISSALRYLHEN---RIIHRDLKPENIVL 154
Query: 502 D---KEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGIL 558
               + +  ++ D G A+    G++   T  VGT+ YLAPE+    + +   D + FG L
Sbjct: 155 QPGPQRLIHKIIDLGYAKELDQGELC--TEFVGTLQYLAPELLEQKKYTVTVDYWSFGTL 212
Query: 559 ILEVLSGRRPIEEGKPNLVEMVWELMVQGK 588
             E ++G RP     PN   + W   V+ K
Sbjct: 213 AFECITGFRPF---LPNWQPVQWHGKVREK 239

>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase Complex With Dasatinib Length = 268

Iteration: 1
 Score = 82.8 bits (203), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 55/184 (29%), Positives = 94/184 (51%), Gaps = 8/184 (4%)
Query: 388 GGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENG 447
           G  ++AVK I  E       F  E  ++ +L H  LV   G C +E   + +V +Y+ NG
Sbjct: 31  GQYDVAVKMIK-EGSMSEDEFFQEAQTMMKLSHPKLVKFYGVCSKEY-PIYIVTEYISNG 88
Query: 448 SLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNG 507
            L  ++      +  S  + + +  DV  G+ +L      + +HRD+ + N L+D+++  
Sbjct: 89  CLLNYLRSHGKGLEPS--QLLEMCYDVCEGMAFLES---HQFIHRDLAARNCLVDRDLCV 143
Query: 508 RLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLS-GR 566
           ++ DFG+ R     Q  S+      V + APEVF   + S+++DV+ FGIL+ EV S G+
Sbjct: 144 KVSDFGMTRYVLDDQYVSSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGK 203
Query: 567 RPIE 570
            P +
Sbjct: 204 MPYD 207

>pdb|1BJQ|A Chain A, The Dolichos Biflorus Seed Lectin In Complex With Adenine Length = 253

Iteration: 1
 Score = 82.4 bits (202), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 80/262 (30%), Positives = 120/262 (45%), Gaps = 49/262 (18%)
Query: 28  FVFNGFNSSNLSLYGTATVESRILTLTN------STTFTIGRALYPSKIPTKRPNSSYVY 81
           F F  FNS +  L G ATV S  L LT        T  ++GRA Y S I     ++  V 
Sbjct: 6   FSFKNFNSPSFILQGDATVSSGKLQLTKVKENGIPTPSSLGRAFYSSPIQIYDKSTGAVA 65
Query: 82  PFSTSFIFAM-APYKGVLAGHGLVFLFVPFHGIKGATEAQHLGLFNRTNDGNSSNHVFGV 140
            ++TSF   + AP K   A  G+ F  VP  G +      +LG+F+     NS+  V  V
Sbjct: 66  SWATSFTVKISAPSKASFA-DGIAFALVPV-GSEPRRNGGYLGVFDSDVYNNSAQTV-AV 122
Query: 141 EFDVFKNQEFNDIDENHVGIDVNSLTSVSAHAAGYWPDNQXXXXXXXXXXXXXXXEKSFK 200
           EFD   N  + D    H+GIDVNS+ S+   A   W                        
Sbjct: 123 EFDTLSNSGW-DPSMKHIGIDVNSIKSI---ATVSW------------------------ 154
Query: 201 ELKLNNGKNYQVWIDYADSFINITMVEAGMKRPKRP---LLSVPLNLSGVLEDEMYVGFT 257
              L NG+N ++ I Y  +    +++ A +  P R    +LS  ++++  L + + VGF+
Sbjct: 155 --DLANGENAEILITYNAA---TSLLVASLVHPSRRTSYILSERVDITNELPEYVSVGFS 209
Query: 258 AATGQ---LVESHKILAWSFSN 276
           A TG     +E+H +L+WSF++
Sbjct: 210 ATTGLSEGYIETHDVLSWSFAS 231

>pdb|3USU|A Chain A, Crystal Structure Of Butea Monosperma Seed Lectin Length = 256

Iteration: 1
 Score = 82.0 bits (201), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 91/286 (31%), Positives = 125/286 (43%), Gaps = 56/286 (19%)
Query: 28  FVFNGF--NSSNLSLYGTATVESR-ILTLTN------STTFTIGRALYPSKIPTKRPNSS 78
           F F+ F  N  NL   G ATV S   L LT           ++GRALY S I      + 
Sbjct: 7   FTFSKFKPNQPNLKKQGDATVTSSGTLQLTKVDKNGVPDPKSLGRALYASPINIWDSKTG 66
Query: 79  YVYPFSTSFIFAM-APYKGVLAGHGLVFLFVPFHGIKGATEAQHLGLFNRTNDGNSSNHV 137
            V  F+TSF F + AP    +A  GL F   P      A  A  LGLF+     NSS   
Sbjct: 67  VVASFATSFRFTIYAPNIATIA-DGLAFFLAPVSSPPKA-GAGFLGLFDSAV-FNSSYQT 123
Query: 138 FGVEFDVFKNQEFNDIDENHVGIDVNSLTSVSAHAAGYWPDNQXXXXXXXXXXXXXXXEK 197
             VEFD ++N  F D  + H+GIDVNS+                               K
Sbjct: 124 VAVEFDTYENTVFLDPPDTHIGIDVNSI-------------------------------K 152
Query: 198 SFKELK--LNNGKNYQVWIDYADSFINITMVEAGMKRPKRP---LLSVPLNLSGVLEDEM 252
           S K +K  L NG+  +V I Y  S     ++ A +  P      +LS  ++L  VL + +
Sbjct: 153 SIKTVKWDLANGEAAKVLITYDSS---AKLLVAALVYPSSKTSFILSDVVDLKSVLPEWV 209
Query: 253 YVGFTAATGQ---LVESHKILAWSFSNTKFSLSEELITSGLPSFVL 295
            +GF+AATG     +E+H + +WSF+ +K S         L SF++
Sbjct: 210 SIGFSAATGASSGYIETHDVFSWSFA-SKLSFXXXXXXLDLASFLV 254

>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In Complex With Adp Length = 286

Iteration: 1
 Score = 82.0 bits (201), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 50/168 (29%), Positives = 96/168 (57%), Gaps = 11/168 (6%)
Query: 406 RAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCE 465
           R FL+E S +G+  H +++ L G   +    +M++ ++MENGSLD ++ Q DG    +  
Sbjct: 53  RDFLSEASIMGQFDHPNVIHLEGVVTKST-PVMIITEFMENGSLDSFLRQNDGQ--FTVI 109
Query: 466 ERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLAR-MHGHGQVA 524
           + + +L+ +AAG+ YL    +   +HR + + N+L++  +  ++ DFGL+R +       
Sbjct: 110 QLVGMLRGIAAGMKYLA---DMNYVHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDP 166
Query: 525 STTRVVG---TVGYLAPEVFSSGRASTQTDVFGFGILILEVLS-GRRP 568
           + T  +G    + + APE     + ++ +DV+ +GI++ EV+S G RP
Sbjct: 167 TYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERP 214

>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed With Compound 16 Length = 271

Iteration: 1
 Score = 81.6 bits (200), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 57/192 (29%), Positives = 95/192 (49%), Gaps = 20/192 (10%)
Query: 389 GAEIAVKRISHENDGGTRAFLAEISSLGRL----KHKSLVGLRGWCKREKGSLMLVYDYM 444
           G E+AVK   H+ D      +  +    +L    KH +++ LRG C +E  +L LV ++ 
Sbjct: 30  GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEP-NLCLVMEFA 88
Query: 445 ENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVL-LDK 503
             G L++ +        +  +  +     +A G+ YLH+     ++HRD+KSSN+L L K
Sbjct: 89  RGGPLNRVL----SGKRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQK 144
Query: 504 EMNG-------RLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFG 556
             NG       ++ DFGLAR        +     G   ++APEV  +   S  +DV+ +G
Sbjct: 145 VENGDLSNKILKITDFGLAR---EWHRTTKMSAAGAYAWMAPEVIRASMFSKGSDVWSYG 201
Query: 557 ILILEVLSGRRP 568
           +L+ E+L+G  P
Sbjct: 202 VLLWELLTGEVP 213

>pdb|3USU|B Chain B, Crystal Structure Of Butea Monosperma Seed Lectin Length = 242

Iteration: 1
 Score = 81.3 bits (199), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 86/267 (32%), Positives = 118/267 (44%), Gaps = 55/267 (20%)
Query: 28  FVFNGF--NSSNLSLYGTATVESR-ILTLTN------STTFTIGRALYPSKIPTKRPNSS 78
           F F+ F  N  NL   G ATV S   L LT           ++GRALY S I      + 
Sbjct: 7   FTFSKFKPNQPNLKKQGDATVTSSGTLQLTKVDKNGVPDPKSLGRALYASPINIWDSKTG 66
Query: 79  YVYPFSTSFIFAM-APYKGVLAGHGLVFLFVPFHGIKGATEAQHLGLFNRTNDGNSSNHV 137
            V  F+TSF F + AP    +A  GL F   P      A  A  LGLF+     NSS   
Sbjct: 67  VVASFATSFRFTIYAPNIATIA-DGLAFFLAPVSSPPKA-GAGFLGLFDSAV-FNSSYQT 123
Query: 138 FGVEFDVFKNQEFNDIDENHVGIDVNSLTSVSAHAAGYWPDNQXXXXXXXXXXXXXXXEK 197
             VEFD ++N  F D  + H+GIDVNS+                               K
Sbjct: 124 VAVEFDTYENTVFLDPPDTHIGIDVNSI-------------------------------K 152
Query: 198 SFKELK--LNNGKNYQVWIDYADSFINITMVEAGMKRPKRP---LLSVPLNLSGVLEDEM 252
           S K +K  L NG+  +V I Y  S     ++ A +  P      +LS  ++L  VL + +
Sbjct: 153 SIKTVKWDLANGEAAKVLITYDSS---AKLLVAALVYPSSKTSFILSDVVDLKSVLPEWV 209
Query: 253 YVGFTAATGQ---LVESHKILAWSFSN 276
            +GF+AATG     +E+H + +WSF++
Sbjct: 210 SIGFSAATGASSGYIETHDVFSWSFAS 236

>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase Erk1 Length = 382

Iteration: 1
 Score = 80.5 bits (197), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 59/190 (31%), Positives = 97/190 (51%), Gaps = 17/190 (8%)
Query: 392 IAVKRIS-HENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLM----LVYDYMEN 446
           +A+K+IS  E+    +  L EI  L R +H++++G+R   +      M    +V D ME 
Sbjct: 71  VAIKKISPFEHQTYCQRTLREIQILLRFRHENVIGIRDILRASTLEAMRDVYIVQDLMET 130
Query: 447 GSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMN 506
                 +++   S  LS +     L  +  G+ Y+H      VLHRD+K SN+L++   +
Sbjct: 131 D-----LYKLLKSQQLSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLINTTCD 182
Query: 507 GRLGDFGLARMHG--HGQVASTTRVVGTVGYLAPEVFSSGRASTQT-DVFGFGILILEVL 563
            ++ DFGLAR+    H      T  V T  Y APE+  + +  T++ D++  G ++ E+L
Sbjct: 183 LKICDFGLARIADPEHDHTGFLTEXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML 242
Query: 564 SGRRPIEEGK 573
           S  RPI  GK
Sbjct: 243 SN-RPIFPGK 251

>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol Length = 360

Iteration: 1
 Score = 80.5 bits (197), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 58/192 (30%), Positives = 97/192 (50%), Gaps = 17/192 (8%)
Query: 390 AEIAVKRIS-HENDGGTRAFLAEISSLGRLKHKSLVGL----RGWCKREKGSLMLVYDYM 444
             +A+K+IS  E+    +  L EI  L R +H++++G+    R     +   + +V D M
Sbjct: 49  VRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLM 108
Query: 445 ENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKE 504
           E       +++   +  LS +     L  +  G+ Y+H      VLHRD+K SN+LL+  
Sbjct: 109 ETD-----LYKLLKTQHLSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTT 160
Query: 505 MNGRLGDFGLARMH--GHGQVASTTRVVGTVGYLAPEVFSSGRASTQT-DVFGFGILILE 561
            + ++ DFGLAR+    H      T  V T  Y APE+  + +  T++ D++  G ++ E
Sbjct: 161 XDLKIXDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAE 220
Query: 562 VLSGRRPIEEGK 573
           +LS  RPI  GK
Sbjct: 221 MLSN-RPIFPGK 231

>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94 Length = 360

Iteration: 1
 Score = 80.5 bits (197), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 58/192 (30%), Positives = 97/192 (50%), Gaps = 17/192 (8%)
Query: 390 AEIAVKRIS-HENDGGTRAFLAEISSLGRLKHKSLVGL----RGWCKREKGSLMLVYDYM 444
             +A+K+IS  E+    +  L EI  L R +H++++G+    R     +   + +V D M
Sbjct: 49  VRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLM 108
Query: 445 ENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKE 504
           E       +++   +  LS +     L  +  G+ Y+H      VLHRD+K SN+LL+  
Sbjct: 109 ETD-----LYKLLKTQHLSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTT 160
Query: 505 MNGRLGDFGLARMH--GHGQVASTTRVVGTVGYLAPEVFSSGRASTQT-DVFGFGILILE 561
            + ++ DFGLAR+    H      T  V T  Y APE+  + +  T++ D++  G ++ E
Sbjct: 161 XDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAE 220
Query: 562 VLSGRRPIEEGK 573
           +LS  RPI  GK
Sbjct: 221 MLSN-RPIFPGK 231

>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75 Length = 360

Iteration: 1
 Score = 80.1 bits (196), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 58/192 (30%), Positives = 97/192 (50%), Gaps = 17/192 (8%)
Query: 390 AEIAVKRIS-HENDGGTRAFLAEISSLGRLKHKSLVGL----RGWCKREKGSLMLVYDYM 444
             +A+K+IS  E+    +  L EI  L R +H++++G+    R     +   + +V D M
Sbjct: 49  VRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLM 108
Query: 445 ENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKE 504
           E       +++   +  LS +     L  +  G+ Y+H      VLHRD+K SN+LL+  
Sbjct: 109 ETD-----LYKLLKTQHLSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTT 160
Query: 505 MNGRLGDFGLARMH--GHGQVASTTRVVGTVGYLAPEVFSSGRASTQT-DVFGFGILILE 561
            + ++ DFGLAR+    H      T  V T  Y APE+  + +  T++ D++  G ++ E
Sbjct: 161 XDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAE 220
Query: 562 VLSGRRPIEEGK 573
           +LS  RPI  GK
Sbjct: 221 MLSN-RPIFPGK 231

>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57 Length = 360

Iteration: 1
 Score = 80.1 bits (196), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 58/192 (30%), Positives = 97/192 (50%), Gaps = 17/192 (8%)
Query: 390 AEIAVKRIS-HENDGGTRAFLAEISSLGRLKHKSLVGL----RGWCKREKGSLMLVYDYM 444
             +A+K+IS  E+    +  L EI  L R +H++++G+    R     +   + +V D M
Sbjct: 49  VRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLM 108
Query: 445 ENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKE 504
           E       +++   +  LS +     L  +  G+ Y+H      VLHRD+K SN+LL+  
Sbjct: 109 ETD-----LYKLLKTQHLSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTT 160
Query: 505 MNGRLGDFGLARMH--GHGQVASTTRVVGTVGYLAPEVFSSGRASTQT-DVFGFGILILE 561
            + ++ DFGLAR+    H      T  V T  Y APE+  + +  T++ D++  G ++ E
Sbjct: 161 CDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAE 220
Query: 562 VLSGRRPIEEGK 573
           +LS  RPI  GK
Sbjct: 221 MLSN-RPIFPGK 231

>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex Length = 302

Iteration: 1
 Score = 80.1 bits (196), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 63/240 (26%), Positives = 116/240 (48%), Gaps = 25/240 (10%)
Query: 406 RAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCE 465
           R FL+E S +G+ +H +++ L G        +M++ ++MENG+LD ++   DG    +  
Sbjct: 62  REFLSEASIMGQFEHPNIIRLEGVVTNSM-PVMILTEFMENGALDSFLRLNDGQ--FTVI 118
Query: 466 ERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLAR-MHGHGQVA 524
           + + +L+ +A+G+ YL E      +HRD+ + N+L++  +  ++ DFGL+R +  +    
Sbjct: 119 QLVGMLRGIASGMRYLAE---MSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDP 175
Query: 525 STTRVVG---TVGYLAPEVFSSGRASTQTDVFGFGILILEVLS-GRRPIEEGKPNLVEMV 580
           + T  +G    + + APE  +  + ++ +D + +GI++ EV+S G RP            
Sbjct: 176 TETSSLGGKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMSFGERP-----------Y 224
Query: 581 WELMVQGKXXXXXXXXXXXKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLEGKI 640
           W++  Q                   D    +  L L C   D  ARP   QVV  L+  I
Sbjct: 225 WDMSNQDVINAIEQDYRLPP---PPDCPTSLHQLMLDCWQKDRNARPRFPQVVSALDKMI 281

>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat Protein In Complex With The Map Kinase Erk2 Length = 365

Iteration: 1
 Score = 80.1 bits (196), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 58/192 (30%), Positives = 97/192 (50%), Gaps = 17/192 (8%)
Query: 390 AEIAVKRIS-HENDGGTRAFLAEISSLGRLKHKSLVGL----RGWCKREKGSLMLVYDYM 444
             +A+K+IS  E+    +  L EI  L R +H++++G+    R     +   + +V D M
Sbjct: 54  VRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLM 113
Query: 445 ENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKE 504
           E       +++   +  LS +     L  +  G+ Y+H      VLHRD+K SN+LL+  
Sbjct: 114 ETD-----LYKLLKTQHLSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTT 165
Query: 505 MNGRLGDFGLARMH--GHGQVASTTRVVGTVGYLAPEVFSSGRASTQT-DVFGFGILILE 561
            + ++ DFGLAR+    H      T  V T  Y APE+  + +  T++ D++  G ++ E
Sbjct: 166 CDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAE 225
Query: 562 VLSGRRPIEEGK 573
           +LS  RPI  GK
Sbjct: 226 MLSN-RPIFPGK 236

>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor Length = 364

Iteration: 1
 Score = 80.1 bits (196), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 58/192 (30%), Positives = 97/192 (50%), Gaps = 17/192 (8%)
Query: 390 AEIAVKRIS-HENDGGTRAFLAEISSLGRLKHKSLVGL----RGWCKREKGSLMLVYDYM 444
             +A+K+IS  E+    +  L EI  L R +H++++G+    R     +   + +V D M
Sbjct: 53  VRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLM 112
Query: 445 ENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKE 504
           E       +++   +  LS +     L  +  G+ Y+H      VLHRD+K SN+LL+  
Sbjct: 113 ETD-----LYKLLKTQHLSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTT 164
Query: 505 MNGRLGDFGLARMH--GHGQVASTTRVVGTVGYLAPEVFSSGRASTQT-DVFGFGILILE 561
            + ++ DFGLAR+    H      T  V T  Y APE+  + +  T++ D++  G ++ E
Sbjct: 165 XDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAE 224
Query: 562 VLSGRRPIEEGK 573
           +LS  RPI  GK
Sbjct: 225 MLSN-RPIFPGK 235

>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e) Length = 358

Iteration: 1
 Score = 80.1 bits (196), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 58/192 (30%), Positives = 97/192 (50%), Gaps = 17/192 (8%)
Query: 390 AEIAVKRIS-HENDGGTRAFLAEISSLGRLKHKSLVGL----RGWCKREKGSLMLVYDYM 444
             +A+K+IS  E+    +  L EI  L R +H++++G+    R     +   + +V D M
Sbjct: 47  VRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLM 106
Query: 445 ENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKE 504
           E       +++   +  LS +     L  +  G+ Y+H      VLHRD+K SN+LL+  
Sbjct: 107 ETD-----LYKLLKTQHLSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTT 158
Query: 505 MNGRLGDFGLARMH--GHGQVASTTRVVGTVGYLAPEVFSSGRASTQT-DVFGFGILILE 561
            + ++ DFGLAR+    H      T  V T  Y APE+  + +  T++ D++  G ++ E
Sbjct: 159 CDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAE 218
Query: 562 VLSGRRPIEEGK 573
           +LS  RPI  GK
Sbjct: 219 MLSN-RPIFPGK 229

>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In Complex With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin 2-Yl]amino}phenyl)acetic Acid Length = 366

Iteration: 1
 Score = 80.1 bits (196), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 58/192 (30%), Positives = 97/192 (50%), Gaps = 17/192 (8%)
Query: 390 AEIAVKRIS-HENDGGTRAFLAEISSLGRLKHKSLVGL----RGWCKREKGSLMLVYDYM 444
             +A+K+IS  E+    +  L EI  L R +H++++G+    R     +   + +V D M
Sbjct: 55  VRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLM 114
Query: 445 ENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKE 504
           E       +++   +  LS +     L  +  G+ Y+H      VLHRD+K SN+LL+  
Sbjct: 115 ETD-----LYKLLKTQHLSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTT 166
Query: 505 MNGRLGDFGLARMH--GHGQVASTTRVVGTVGYLAPEVFSSGRASTQT-DVFGFGILILE 561
            + ++ DFGLAR+    H      T  V T  Y APE+  + +  T++ D++  G ++ E
Sbjct: 167 CDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAE 226
Query: 562 VLSGRRPIEEGK 573
           +LS  RPI  GK
Sbjct: 227 MLSN-RPIFPGK 237

>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently Bound Length = 357

Iteration: 1
 Score = 80.1 bits (196), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 58/192 (30%), Positives = 97/192 (50%), Gaps = 17/192 (8%)
Query: 390 AEIAVKRIS-HENDGGTRAFLAEISSLGRLKHKSLVGL----RGWCKREKGSLMLVYDYM 444
             +A+K+IS  E+    +  L EI  L R +H++++G+    R     +   + +V D M
Sbjct: 46  VRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLM 105
Query: 445 ENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKE 504
           E       +++   +  LS +     L  +  G+ Y+H      VLHRD+K SN+LL+  
Sbjct: 106 ETD-----LYKLLKTQHLSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTT 157
Query: 505 MNGRLGDFGLARMH--GHGQVASTTRVVGTVGYLAPEVFSSGRASTQT-DVFGFGILILE 561
            + ++ DFGLAR+    H      T  V T  Y APE+  + +  T++ D++  G ++ E
Sbjct: 158 CDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAE 217
Query: 562 VLSGRRPIEEGK 573
           +LS  RPI  GK
Sbjct: 218 MLSN-RPIFPGK 228

>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived From Mkp3 Length = 364

Iteration: 1
 Score = 80.1 bits (196), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 58/192 (30%), Positives = 97/192 (50%), Gaps = 17/192 (8%)
Query: 390 AEIAVKRIS-HENDGGTRAFLAEISSLGRLKHKSLVGL----RGWCKREKGSLMLVYDYM 444
             +A+K+IS  E+    +  L EI  L R +H++++G+    R     +   + +V D M
Sbjct: 53  VRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLM 112
Query: 445 ENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKE 504
           E       +++   +  LS +     L  +  G+ Y+H      VLHRD+K SN+LL+  
Sbjct: 113 ETD-----LYKLLKTQHLSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTT 164
Query: 505 MNGRLGDFGLARMH--GHGQVASTTRVVGTVGYLAPEVFSSGRASTQT-DVFGFGILILE 561
            + ++ DFGLAR+    H      T  V T  Y APE+  + +  T++ D++  G ++ E
Sbjct: 165 CDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAE 224
Query: 562 VLSGRRPIEEGK 573
           +LS  RPI  GK
Sbjct: 225 MLSN-RPIFPGK 235

>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX Length = 358

Iteration: 1
 Score = 80.1 bits (196), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 58/192 (30%), Positives = 97/192 (50%), Gaps = 17/192 (8%)
Query: 390 AEIAVKRIS-HENDGGTRAFLAEISSLGRLKHKSLVGL----RGWCKREKGSLMLVYDYM 444
             +A+K+IS  E+    +  L EI  L R +H++++G+    R     +   + +V D M
Sbjct: 47  VRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLM 106
Query: 445 ENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKE 504
           E       +++   +  LS +     L  +  G+ Y+H      VLHRD+K SN+LL+  
Sbjct: 107 ETD-----LYKLLKTQHLSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTT 158
Query: 505 MNGRLGDFGLARMH--GHGQVASTTRVVGTVGYLAPEVFSSGRASTQT-DVFGFGILILE 561
            + ++ DFGLAR+    H      T  V T  Y APE+  + +  T++ D++  G ++ E
Sbjct: 159 CDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAE 218
Query: 562 VLSGRRPIEEGK 573
           +LS  RPI  GK
Sbjct: 219 MLSN-RPIFPGK 229

>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2 Length = 364

Iteration: 1
 Score = 79.7 bits (195), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 58/192 (30%), Positives = 97/192 (50%), Gaps = 17/192 (8%)
Query: 390 AEIAVKRIS-HENDGGTRAFLAEISSLGRLKHKSLVGL----RGWCKREKGSLMLVYDYM 444
             +A+K+IS  E+    +  L EI  L R +H++++G+    R     +   + +V D M
Sbjct: 53  VRVAIKKISPFEHQTYXQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLM 112
Query: 445 ENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKE 504
           E       +++   +  LS +     L  +  G+ Y+H      VLHRD+K SN+LL+  
Sbjct: 113 ETD-----LYKLLKTQHLSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTT 164
Query: 505 MNGRLGDFGLARMH--GHGQVASTTRVVGTVGYLAPEVFSSGRASTQT-DVFGFGILILE 561
            + ++ DFGLAR+    H      T  V T  Y APE+  + +  T++ D++  G ++ E
Sbjct: 165 XDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAE 224
Query: 562 VLSGRRPIEEGK 573
           +LS  RPI  GK
Sbjct: 225 MLSN-RPIFPGK 235

>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole Inhibitor Length = 291

Iteration: 1
 Score = 79.7 bits (195), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 63/240 (26%), Positives = 116/240 (48%), Gaps = 25/240 (10%)
Query: 406 RAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCE 465
           R FL+E S +G+ +H +++ L G        +M++ ++MENG+LD ++   DG    +  
Sbjct: 60  REFLSEASIMGQFEHPNIIRLEGVVTNSM-PVMILTEFMENGALDSFLRLNDGQ--FTVI 116
Query: 466 ERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLAR-MHGHGQVA 524
           + + +L+ +A+G+ YL E      +HRD+ + N+L++  +  ++ DFGL+R +  +    
Sbjct: 117 QLVGMLRGIASGMRYLAE---MSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDP 173
Query: 525 STTRVVG---TVGYLAPEVFSSGRASTQTDVFGFGILILEVLS-GRRPIEEGKPNLVEMV 580
           + T  +G    + + APE  +  + ++ +D + +GI++ EV+S G RP            
Sbjct: 174 TYTSSLGGKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMSFGERP-----------Y 222
Query: 581 WELMVQGKXXXXXXXXXXXKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLEGKI 640
           W++  Q                   D    +  L L C   D  ARP   QVV  L+  I
Sbjct: 223 WDMSNQDVINAIEQDYRLPP---PPDCPTSLHQLMLDCWQKDRNARPRFPQVVSALDKMI 279

>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk Docking Peptide Length = 362

Iteration: 1
 Score = 79.7 bits (195), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 58/192 (30%), Positives = 97/192 (50%), Gaps = 17/192 (8%)
Query: 390 AEIAVKRIS-HENDGGTRAFLAEISSLGRLKHKSLVGL----RGWCKREKGSLMLVYDYM 444
             +A+K+IS  E+    +  L EI  L R +H++++G+    R     +   + +V D M
Sbjct: 51  VRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLM 110
Query: 445 ENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKE 504
           E       +++   +  LS +     L  +  G+ Y+H      VLHRD+K SN+LL+  
Sbjct: 111 ETD-----LYKLLKTQHLSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTT 162
Query: 505 MNGRLGDFGLARMH--GHGQVASTTRVVGTVGYLAPEVFSSGRASTQT-DVFGFGILILE 561
            + ++ DFGLAR+    H      T  V T  Y APE+  + +  T++ D++  G ++ E
Sbjct: 163 CDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAE 222
Query: 562 VLSGRRPIEEGK 573
           +LS  RPI  GK
Sbjct: 223 MLSN-RPIFPGK 233

>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus SerineTHREONINE KINASE Pknb Length = 294

Iteration: 1
 Score = 79.7 bits (195), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 50/181 (27%), Positives = 90/181 (49%), Gaps = 10/181 (5%)
Query: 391 EIAVKRI---SHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENG 447
           ++A+K I     E +   + F  E+ +  +L H+++V +      E     LV +Y+E  
Sbjct: 38  KVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMID-VDEEDDCYYLVMEYIEGP 96
Query: 448 SLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNG 507
           +L ++I +  G   LS +  I     +  G+ + H+    +++HRDIK  N+L+D     
Sbjct: 97  TLSEYI-ESHGP--LSVDTAINFTNQILDGIKHAHD---MRIVHRDIKPQNILIDSNKTL 150
Query: 508 RLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRR 567
           ++ DFG+A+      +  T  V+GTV Y +PE          TD++  GI++ E+L G  
Sbjct: 151 KIFDFGIAKALSETSLTQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEP 210
Query: 568 P 568
           P
Sbjct: 211 P 211

>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Pyrazolopyridazine Derivative Length = 368

Iteration: 1
 Score = 79.7 bits (195), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 58/192 (30%), Positives = 97/192 (50%), Gaps = 17/192 (8%)
Query: 390 AEIAVKRIS-HENDGGTRAFLAEISSLGRLKHKSLVGL----RGWCKREKGSLMLVYDYM 444
             +A+K+IS  E+    +  L EI  L R +H++++G+    R     +   + +V D M
Sbjct: 57  VRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLM 116
Query: 445 ENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKE 504
           E       +++   +  LS +     L  +  G+ Y+H      VLHRD+K SN+LL+  
Sbjct: 117 ETD-----LYKLLKTQHLSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTT 168
Query: 505 MNGRLGDFGLARMH--GHGQVASTTRVVGTVGYLAPEVFSSGRASTQT-DVFGFGILILE 561
            + ++ DFGLAR+    H      T  V T  Y APE+  + +  T++ D++  G ++ E
Sbjct: 169 CDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAE 228
Query: 562 VLSGRRPIEEGK 573
           +LS  RPI  GK
Sbjct: 229 MLSN-RPIFPGK 239

>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule Inhibitor Length = 368

Iteration: 1
 Score = 79.7 bits (195), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 58/192 (30%), Positives = 97/192 (50%), Gaps = 17/192 (8%)
Query: 390 AEIAVKRIS-HENDGGTRAFLAEISSLGRLKHKSLVGL----RGWCKREKGSLMLVYDYM 444
             +A+K+IS  E+    +  L EI  L R +H++++G+    R     +   + +V D M
Sbjct: 49  VRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLM 108
Query: 445 ENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKE 504
           E       +++   +  LS +     L  +  G+ Y+H      VLHRD+K SN+LL+  
Sbjct: 109 ETD-----LYKLLKTQHLSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTT 160
Query: 505 MNGRLGDFGLARMH--GHGQVASTTRVVGTVGYLAPEVFSSGRASTQT-DVFGFGILILE 561
            + ++ DFGLAR+    H      T  V T  Y APE+  + +  T++ D++  G ++ E
Sbjct: 161 CDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAE 220
Query: 562 VLSGRRPIEEGK 573
           +LS  RPI  GK
Sbjct: 221 MLSN-RPIFPGK 231

>pdb|1G8W|A Chain A, Improved Structure Of Phytohemagglutinin-L From The Kidney Bean Length = 233

Iteration: 1
 Score = 79.7 bits (195), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 82/262 (31%), Positives = 118/262 (45%), Gaps = 52/262 (19%)
Query: 28  FVFNGFNSSNLSLYGTATVESR-ILTLTN------STTFTIGRALYPSKIPTKRPNSSYV 80
           F F  FN +NL L   A+V S   L LTN          ++GRA Y + I      +  V
Sbjct: 6   FNFQRFNETNLILQRDASVSSSGQLRLTNLNGNGEPRVGSLGRAFYSAPIQIWDNTTGTV 65
Query: 81  YPFSTSFIFAMAPYKGVLAGHGLVFLFVPFHGIKGATEAQHLGLFNRTNDGNSSN-HVFG 139
             F+TSF F +          GL F  VP  G +   +   LGLF    DG++SN H   
Sbjct: 66  ASFATSFTFNIQVPNNAGPADGLAFALVPV-GSQPKDKGGFLGLF----DGSNSNFHTVA 120
Query: 140 VEFDVFKNQEFNDIDENHVGIDVNSLTSVSAHAAGYWPDNQXXXXXXXXXXXXXXXEKSF 199
           VEFD   N+++ D  E H+GIDVNS+ S+                               
Sbjct: 121 VEFDTLYNKDW-DPTERHIGIDVNSIRSIKT----------------------------- 150
Query: 200 KELKLNNGKNYQVWIDYADSFINITMVEAGMKRPKRP---LLSVPLNLSGVLEDEMYVGF 256
                 NG+N +V I Y DS  N+ +  A +  P +    ++S  ++L  VL + + VGF
Sbjct: 151 TRWDFVNGENAEVLITY-DSSTNLLV--ASLVYPSQKTSFIVSDTVDLKSVLPEWVSVGF 207
Query: 257 TAATG---QLVESHKILAWSFS 275
           +A TG     VE++ +L+WSF+
Sbjct: 208 SATTGINKGNVETNDVLSWSFA 229

>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With N,n-dimethyl-4-(4- Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide Length = 380

Iteration: 1
 Score = 79.7 bits (195), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 58/192 (30%), Positives = 97/192 (50%), Gaps = 17/192 (8%)
Query: 390 AEIAVKRIS-HENDGGTRAFLAEISSLGRLKHKSLVGL----RGWCKREKGSLMLVYDYM 444
             +A+K+IS  E+    +  L EI  L R +H++++G+    R     +   + +V D M
Sbjct: 69  VRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLM 128
Query: 445 ENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKE 504
           E       +++   +  LS +     L  +  G+ Y+H      VLHRD+K SN+LL+  
Sbjct: 129 ETD-----LYKLLKTQHLSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTT 180
Query: 505 MNGRLGDFGLARMH--GHGQVASTTRVVGTVGYLAPEVFSSGRASTQT-DVFGFGILILE 561
            + ++ DFGLAR+    H      T  V T  Y APE+  + +  T++ D++  G ++ E
Sbjct: 181 CDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAE 240
Query: 562 VLSGRRPIEEGK 573
           +LS  RPI  GK
Sbjct: 241 MLSN-RPIFPGK 251

>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2 Length = 364

Iteration: 1
 Score = 79.3 bits (194), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 58/192 (30%), Positives = 96/192 (50%), Gaps = 17/192 (8%)
Query: 390 AEIAVKRIS-HENDGGTRAFLAEISSLGRLKHKSLVGL----RGWCKREKGSLMLVYDYM 444
             +A+K+IS  E+    +  L EI  L R +H++++G+    R     +   + +V D M
Sbjct: 53  VRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLM 112
Query: 445 ENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKE 504
           E       +++      LS +     L  +  G+ Y+H      VLHRD+K SN+LL+  
Sbjct: 113 ETD-----LYKLLKCQHLSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTT 164
Query: 505 MNGRLGDFGLARMH--GHGQVASTTRVVGTVGYLAPEVFSSGRASTQT-DVFGFGILILE 561
            + ++ DFGLAR+    H      T  V T  Y APE+  + +  T++ D++  G ++ E
Sbjct: 165 CDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAE 224
Query: 562 VLSGRRPIEEGK 573
           +LS  RPI  GK
Sbjct: 225 MLSN-RPIFPGK 235

>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex With Inhibitor Cgi1746 Length = 271

Iteration: 1
 Score = 79.0 bits (193), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 51/184 (27%), Positives = 94/184 (51%), Gaps = 8/184 (4%)
Query: 388 GGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENG 447
           G  ++A+K I  E       F+ E   +  L H+ LV L G C +++  + ++ +YM NG
Sbjct: 32  GQYDVAIKMIK-EGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQR-PIFIITEYMANG 89
Query: 448 SLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNG 507
            L  ++ +         ++ + + KDV   + YL     K+ LHRD+ + N L++ +   
Sbjct: 90  CLLNYLREMRHR--FQTQQLLEMCKDVCEAMEYLES---KQFLHRDLAARNCLVNDQGVV 144
Query: 508 RLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLS-GR 566
           ++ DFGL+R     +  S+      V +  PEV    + S+++D++ FG+L+ E+ S G+
Sbjct: 145 KVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGK 204
Query: 567 RPIE 570
            P E
Sbjct: 205 MPYE 208

>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain Length = 263

Iteration: 1
 Score = 79.0 bits (193), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 51/184 (27%), Positives = 94/184 (51%), Gaps = 8/184 (4%)
Query: 388 GGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENG 447
           G  ++A+K I  E       F+ E   +  L H+ LV L G C +++  + ++ +YM NG
Sbjct: 27  GQYDVAIKMIK-EGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQR-PIFIITEYMANG 84
Query: 448 SLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNG 507
            L  ++ +         ++ + + KDV   + YL     K+ LHRD+ + N L++ +   
Sbjct: 85  CLLNYLREMRHR--FQTQQLLEMCKDVCEAMEYLES---KQFLHRDLAARNCLVNDQGVV 139
Query: 508 RLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLS-GR 566
           ++ DFGL+R     +  S+      V +  PEV    + S+++D++ FG+L+ E+ S G+
Sbjct: 140 KVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGK 199
Query: 567 RPIE 570
            P E
Sbjct: 200 MPYE 203

>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine Mutation At Position 52 Length = 364

Iteration: 1
 Score = 79.0 bits (193), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 57/192 (29%), Positives = 97/192 (50%), Gaps = 17/192 (8%)
Query: 390 AEIAVKRIS-HENDGGTRAFLAEISSLGRLKHKSLVGL----RGWCKREKGSLMLVYDYM 444
             +A+++IS  E+    +  L EI  L R +H++++G+    R     +   + +V D M
Sbjct: 53  VRVAIRKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLM 112
Query: 445 ENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKE 504
           E       +++   +  LS +     L  +  G+ Y+H      VLHRD+K SN+LL+  
Sbjct: 113 ETD-----LYKLLKTQHLSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTT 164
Query: 505 MNGRLGDFGLARMH--GHGQVASTTRVVGTVGYLAPEVFSSGRASTQT-DVFGFGILILE 561
            + ++ DFGLAR+    H      T  V T  Y APE+  + +  T++ D++  G ++ E
Sbjct: 165 CDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAE 224
Query: 562 VLSGRRPIEEGK 573
           +LS  RPI  GK
Sbjct: 225 MLSN-RPIFPGK 235

>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7 Length = 346

Iteration: 1
 Score = 79.0 bits (193), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 63/195 (32%), Positives = 97/195 (49%), Gaps = 15/195 (7%)
Query: 392 IAVKRI-----SHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMEN 446
           +A+K+I     S   DG  R  L EI  L  L H +++GL       K ++ LV+D+ME 
Sbjct: 38  VAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLD-AFGHKSNISLVFDFMET 96
Query: 447 GSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMN 506
              D  +   D S++L+       +     G+ YLH+ W   +LHRD+K +N+LLD+   
Sbjct: 97  ---DLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHW---ILHRDLKPNNLLLDENGV 150
Query: 507 GRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRA-STQTDVFGFGILILEVLSG 565
            +L DFGLA+  G    A   +VV T  Y APE+    R      D++  G ++ E+L  
Sbjct: 151 LKLADFGLAKSFGSPNRAYXHQVV-TRWYRAPELLFGARMYGVGVDMWAVGCILAELLL- 208
Query: 566 RRPIEEGKPNLVEMV 580
           R P   G  +L ++ 
Sbjct: 209 RVPFLPGDSDLDQLT 223

>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain Length = 267

Iteration: 1
 Score = 79.0 bits (193), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 51/184 (27%), Positives = 94/184 (51%), Gaps = 8/184 (4%)
Query: 388 GGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENG 447
           G  ++A+K I  E       F+ E   +  L H+ LV L G C +++  + ++ +YM NG
Sbjct: 31  GQYDVAIKMIK-EGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQR-PIFIITEYMANG 88
Query: 448 SLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNG 507
            L  ++ +         ++ + + KDV   + YL     K+ LHRD+ + N L++ +   
Sbjct: 89  CLLNYLREMRHR--FQTQQLLEMCKDVCEAMEYLES---KQFLHRDLAARNCLVNDQGVV 143
Query: 508 RLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLS-GR 566
           ++ DFGL+R     +  S+      V +  PEV    + S+++D++ FG+L+ E+ S G+
Sbjct: 144 KVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGK 203
Query: 567 RPIE 570
            P E
Sbjct: 204 MPYE 207

>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine Kinase Bound To A Pyrrolopyrimidine-Containing Compound Length = 283

Iteration: 1
 Score = 79.0 bits (193), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 51/184 (27%), Positives = 94/184 (51%), Gaps = 8/184 (4%)
Query: 388 GGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENG 447
           G  ++A+K I  E       F+ E   +  L H+ LV L G C +++  + ++ +YM NG
Sbjct: 47  GQYDVAIKMIK-EGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQR-PIFIITEYMANG 104
Query: 448 SLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNG 507
            L  ++ +         ++ + + KDV   + YL     K+ LHRD+ + N L++ +   
Sbjct: 105 CLLNYLREMRHR--FQTQQLLEMCKDVCEAMEYLES---KQFLHRDLAARNCLVNDQGVV 159
Query: 508 RLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLS-GR 566
           ++ DFGL+R     +  S+      V +  PEV    + S+++D++ FG+L+ E+ S G+
Sbjct: 160 KVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGK 219
Query: 567 RPIE 570
            P E
Sbjct: 220 MPYE 223

>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With 2-Isopropyl-7- (4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3- Ylamino)-2h- Phthalazin-1-One Length = 274

Iteration: 1
 Score = 78.6 bits (192), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 51/184 (27%), Positives = 94/184 (51%), Gaps = 8/184 (4%)
Query: 388 GGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENG 447
           G  ++A+K I  E       F+ E   +  L H+ LV L G C +++  + ++ +YM NG
Sbjct: 38  GQYDVAIKMIK-EGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQR-PIFIITEYMANG 95
Query: 448 SLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNG 507
            L  ++ +         ++ + + KDV   + YL     K+ LHRD+ + N L++ +   
Sbjct: 96  CLLNYLREMRHR--FQTQQLLEMCKDVCEAMEYLES---KQFLHRDLAARNCLVNDQGVV 150
Query: 508 RLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLS-GR 566
           ++ DFGL+R     +  S+      V +  PEV    + S+++D++ FG+L+ E+ S G+
Sbjct: 151 KVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGK 210
Query: 567 RPIE 570
            P E
Sbjct: 211 MPYE 214

>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate Ligand Complex Length = 288

Iteration: 1
 Score = 78.6 bits (192), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 58/180 (32%), Positives = 97/180 (53%), Gaps = 11/180 (6%)
Query: 389 GAEIAVK--RISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMEN 446
           G   A+K  R+  E++G     + EIS L  LKH ++V L      +K  L+LV+++++ 
Sbjct: 26  GETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKK-RLVLVFEHLDQ 84
Query: 447 GSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMN 506
             L K +  C+G +     +    L  +  G+ Y H+   ++VLHRD+K  N+L+++E  
Sbjct: 85  -DLKKLLDVCEGGLESVTAKSF--LLQLLNGIAYCHD---RRVLHRDLKPQNLLINREGE 138
Query: 507 GRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVF-SSGRASTQTDVFGFGILILEVLSG 565
            ++ DFGLAR  G   V   T  V T+ Y AP+V   S + ST  D++  G +  E+++G
Sbjct: 139 LKIADFGLARAFG-IPVRKYTHEVVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNG 197

>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5 Length = 288

Iteration: 1
 Score = 78.6 bits (192), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 58/180 (32%), Positives = 97/180 (53%), Gaps = 11/180 (6%)
Query: 389 GAEIAVK--RISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMEN 446
           G   A+K  R+  E++G     + EIS L  LKH ++V L      +K  L+LV+++++ 
Sbjct: 26  GETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKK-RLVLVFEHLDQ 84
Query: 447 GSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMN 506
             L K +  C+G +     +    L  +  G+ Y H+   ++VLHRD+K  N+L+++E  
Sbjct: 85  -DLKKLLDVCEGGLESVTAKSF--LLQLLNGIAYCHD---RRVLHRDLKPQNLLINREGE 138
Query: 507 GRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVF-SSGRASTQTDVFGFGILILEVLSG 565
            ++ DFGLAR  G   V   T  V T+ Y AP+V   S + ST  D++  G +  E+++G
Sbjct: 139 LKIADFGLARAFG-IPVRKYTHEVVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNG 197

>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With Staurosporine Length = 283

Iteration: 1
 Score = 78.2 bits (191), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 53/182 (29%), Positives = 92/182 (50%), Gaps = 8/182 (4%)
Query: 388 GGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENG 447
           G  ++A+K +         +FL E   + +LKH  LV L      E   + +V +YM  G
Sbjct: 32  GNTKVAIKTLK-PGTMSPESFLEEAQIMKKLKHDKLVQLYAVVSEE--PIYIVTEYMNKG 88
Query: 448 SLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNG 507
           SL  ++   +G   L     + +   VAAG+ Y+        +HRD++S+N+L+   +  
Sbjct: 89  SLLDFLKDGEGRA-LKLPNLVDMAAQVAAGMAYIER---MNYIHRDLRSANILVGNGLIC 144
Query: 508 RLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLS-GR 566
           ++ DFGLAR+    +  +       + + APE    GR + ++DV+ FGIL+ E+++ GR
Sbjct: 145 KIADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGR 204
Query: 567 RP 568
            P
Sbjct: 205 VP 206

>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r In Complex With Dasatinib Length = 265

Iteration: 1
 Score = 78.2 bits (191), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 51/184 (27%), Positives = 94/184 (51%), Gaps = 8/184 (4%)
Query: 388 GGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENG 447
           G  ++A+K I  E       F+ E   +  L H+ LV L G C +++  + ++ +YM NG
Sbjct: 32  GQYDVAIKMIK-EGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQR-PIFIITEYMANG 89
Query: 448 SLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNG 507
            L  ++ +         ++ + + KDV   + YL     K+ LHRD+ + N L++ +   
Sbjct: 90  CLLNYLREMRHR--FQTQQLLEMCKDVCEAMEYLES---KQFLHRDLAARNCLVNDQGVV 144
Query: 508 RLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLS-GR 566
           ++ DFGL+R     +  S+      V +  PEV    + S+++D++ FG+L+ E+ S G+
Sbjct: 145 KVSDFGLSRYVLDDEYTSSRGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGK 204
Query: 567 RPIE 570
            P E
Sbjct: 205 MPYE 208

>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And Inactive Conformations Suggests A Mechanism Of Activation For Tec Family Kinases Length = 283

Iteration: 1
 Score = 78.2 bits (191), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 51/184 (27%), Positives = 94/184 (51%), Gaps = 8/184 (4%)
Query: 388 GGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENG 447
           G  ++A+K I  E       F+ E   +  L H+ LV L G C +++  + ++ +YM NG
Sbjct: 47  GQYDVAIKMIK-EGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQR-PIFIITEYMANG 104
Query: 448 SLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNG 507
            L  ++ +         ++ + + KDV   + YL     K+ LHRD+ + N L++ +   
Sbjct: 105 CLLNYLREMRHR--FQTQQLLEMCKDVCEAMEYLES---KQFLHRDLAARNCLVNDQGVV 159
Query: 508 RLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLS-GR 566
           ++ DFGL+R     +  S+      V +  PEV    + S+++D++ FG+L+ E+ S G+
Sbjct: 160 KVSDFGLSRYVLDDEETSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGK 219
Query: 567 RPIE 570
            P E
Sbjct: 220 MPYE 223

>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine Inhibitor 13 Length = 309

Iteration: 1
 Score = 78.2 bits (191), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 66/252 (26%), Positives = 119/252 (47%), Gaps = 22/252 (8%)
Query: 386 EGGGAEIAVKRISHEND-GGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYM 444
           +G     AVK ++   D G    FL E   +    H +++ L G C R +GS ++V  YM
Sbjct: 54  DGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYM 113
Query: 445 ENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKE 504
           ++G L  +I   + +   + ++ I     VA G+ YL     KK +HRD+ + N +LD++
Sbjct: 114 KHGDLRNFIR--NETHNPTVKDLIGFGLQVAKGMKYLAS---KKFVHRDLAARNCMLDEK 168
Query: 505 MNGRLGDFGLARMHGHGQVASTTRVVGT---VGYLAPEVFSSGRASTQTDVFGFGILILE 561
              ++ DFGLAR     +  S     G    V ++A E   + + +T++DV+ FG+L+ E
Sbjct: 169 FTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWE 228
Query: 562 VLSGRRPIEEGKPNLVEMVWELMVQGKXXXXXXXXXXXKGGFDEDEVERVLHLGLLCAYP 621
           +++   P           V+  ++QG+           +  +  D +  V+   L C +P
Sbjct: 229 LMTRGAPPYPDVNTFDITVY--LLQGR--------RLLQPEYCPDPLYEVM---LKCWHP 275
Query: 622 DPRARPTMRQVV 633
               RP+  ++V
Sbjct: 276 KAEMRPSFSELV 287

>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5 Length = 288

Iteration: 1
 Score = 77.8 bits (190), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 57/180 (31%), Positives = 97/180 (53%), Gaps = 11/180 (6%)
Query: 389 GAEIAVK--RISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMEN 446
           G   A+K  R+  E++G     + EIS L  LKH ++V L      +K  L+LV+++++ 
Sbjct: 26  GETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKK-RLVLVFEHLDQ 84
Query: 447 GSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMN 506
             L K +  C+G +     +    L  +  G+ Y H+   ++VLHRD+K  N+L+++E  
Sbjct: 85  -DLKKLLDVCEGGLESVTAKSF--LLQLLNGIAYCHD---RRVLHRDLKPQNLLINREGE 138
Query: 507 GRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVF-SSGRASTQTDVFGFGILILEVLSG 565
            ++ DFGLAR  G   V   T  + T+ Y AP+V   S + ST  D++  G +  E+++G
Sbjct: 139 LKIADFGLARAFG-IPVRKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNG 197

>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In Complex With An Mk-2461 Analog With Specificity For The Activated Receptor Length = 307

Iteration: 1
 Score = 77.8 bits (190), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 55/187 (29%), Positives = 96/187 (51%), Gaps = 9/187 (4%)
Query: 386 EGGGAEIAVKRISHEND-GGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYM 444
           +G     AVK ++   D G    FL E   +    H +++ L G C R +GS ++V  YM
Sbjct: 54  DGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYM 113
Query: 445 ENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKE 504
           ++G L  +I   + +   + ++ I     VA G+ YL     KK +HRD+ + N +LD++
Sbjct: 114 KHGDLRNFIR--NETHNPTVKDLIGFGLQVAKGMKYLAS---KKFVHRDLAARNCMLDEK 168
Query: 505 MNGRLGDFGLARMHGHGQVASTTRVVGT---VGYLAPEVFSSGRASTQTDVFGFGILILE 561
              ++ DFGLAR     +  S     G    V ++A E   + + +T++DV+ FG+L+ E
Sbjct: 169 FTVKVADFGLARDMYDKEXXSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWE 228
Query: 562 VLSGRRP 568
           +++   P
Sbjct: 229 LMTRGAP 235

>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The Dually-Phosphorylated, Activated State Length = 308

Iteration: 1
 Score = 77.8 bits (190), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 66/252 (26%), Positives = 119/252 (47%), Gaps = 22/252 (8%)
Query: 386 EGGGAEIAVKRISHEND-GGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYM 444
           +G     AVK ++   D G    FL E   +    H +++ L G C R +GS ++V  YM
Sbjct: 55  DGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYM 114
Query: 445 ENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKE 504
           ++G L  +I   + +   + ++ I     VA G+ YL     KK +HRD+ + N +LD++
Sbjct: 115 KHGDLRNFIR--NETHNPTVKDLIGFGLQVAKGMKYLAS---KKFVHRDLAARNCMLDEK 169
Query: 505 MNGRLGDFGLARMHGHGQVASTTRVVGT---VGYLAPEVFSSGRASTQTDVFGFGILILE 561
              ++ DFGLAR     +  S     G    V ++A E   + + +T++DV+ FG+L+ E
Sbjct: 170 FTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWE 229
Query: 562 VLSGRRPIEEGKPNLVEMVWELMVQGKXXXXXXXXXXXKGGFDEDEVERVLHLGLLCAYP 621
           +++   P           V+  ++QG+           +  +  D +  V+   L C +P
Sbjct: 230 LMTRGAPPYPDVNTFDITVY--LLQGR--------RLLQPEYCPDPLYEVM---LKCWHP 276
Query: 622 DPRARPTMRQVV 633
               RP+  ++V
Sbjct: 277 KAEMRPSFSELV 288

>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb Length = 351

Iteration: 1
 Score = 77.8 bits (190), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 63/200 (31%), Positives = 104/200 (52%), Gaps = 26/200 (13%)
Query: 389 GAEIAVKRISHEND--GGTRAFLAEISSLGRLKHKSLVGLRGWCK-------REKGSLML 439
           G ++A+K++  EN+  G     L EI  L  LKH+++V L   C+       R KGS+ L
Sbjct: 42  GQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYL 101
Query: 440 VYDYMEN---GSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKS 496
           V+D+ E+   G L   + +       +  E  RV++ +  G+ Y+H     K+LHRD+K+
Sbjct: 102 VFDFCEHDLAGLLSNVLVK------FTLSEIKRVMQMLLNGLYYIHRN---KILHRDMKA 152
Query: 497 SNVLLDKEMNGRLGDFGLARMHGHGQVASTTRV---VGTVGYLAPEVFSSGRA-STQTDV 552
           +NVL+ ++   +L DFGLAR     + +   R    V T+ Y  PE+    R      D+
Sbjct: 153 ANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPPELLLGERDYGPPIDL 212
Query: 553 FGFGILILEVLSGRRPIEEG 572
           +G G ++ E+ + R PI +G
Sbjct: 213 WGAGCIMAEMWT-RSPIMQG 231

>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor Length = 319

Iteration: 1
 Score = 77.8 bits (190), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 66/252 (26%), Positives = 119/252 (47%), Gaps = 22/252 (8%)
Query: 386 EGGGAEIAVKRISHEND-GGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYM 444
           +G     AVK ++   D G    FL E   +    H +++ L G C R +GS ++V  YM
Sbjct: 74  DGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYM 133
Query: 445 ENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKE 504
           ++G L  +I   + +   + ++ I     VA G+ YL     KK +HRD+ + N +LD++
Sbjct: 134 KHGDLRNFIR--NETHNPTVKDLIGFGLQVAKGMKYLAS---KKFVHRDLAARNCMLDEK 188
Query: 505 MNGRLGDFGLARMHGHGQVASTTRVVGT---VGYLAPEVFSSGRASTQTDVFGFGILILE 561
              ++ DFGLAR     +  S     G    V ++A E   + + +T++DV+ FG+L+ E
Sbjct: 189 FTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWE 248
Query: 562 VLSGRRPIEEGKPNLVEMVWELMVQGKXXXXXXXXXXXKGGFDEDEVERVLHLGLLCAYP 621
           +++   P           V+  ++QG+           +  +  D +  V+   L C +P
Sbjct: 249 LMTRGAPPYPDVNTFDITVY--LLQGR--------RLLQPEYCPDPLYEVM---LKCWHP 295
Query: 622 DPRARPTMRQVV 633
               RP+  ++V
Sbjct: 296 KAEMRPSFSELV 307

>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat Protein In Complex With The Phosphorylated Map Kinase Erk2 Length = 364

Iteration: 1
 Score = 77.8 bits (190), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 57/192 (29%), Positives = 96/192 (50%), Gaps = 17/192 (8%)
Query: 390 AEIAVKRIS-HENDGGTRAFLAEISSLGRLKHKSLVGL----RGWCKREKGSLMLVYDYM 444
             +A+K+IS  E+    +  L EI  L R +H++++G+    R     +   + +V D M
Sbjct: 53  VRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLM 112
Query: 445 ENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKE 504
           E       +++   +  LS +     L  +  G+ Y+H      VLHRD+K SN+LL+  
Sbjct: 113 ETD-----LYKLLKTQHLSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTT 164
Query: 505 MNGRLGDFGLARMH--GHGQVASTTRVVGTVGYLAPEVFSSGRASTQT-DVFGFGILILE 561
            + ++ DFGLAR+    H         V T  Y APE+  + +  T++ D++  G ++ E
Sbjct: 165 CDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAE 224
Query: 562 VLSGRRPIEEGK 573
           +LS  RPI  GK
Sbjct: 225 MLSN-RPIFPGK 235

>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2 Length = 365

Iteration: 1
 Score = 77.8 bits (190), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 57/192 (29%), Positives = 96/192 (50%), Gaps = 17/192 (8%)
Query: 390 AEIAVKRIS-HENDGGTRAFLAEISSLGRLKHKSLVGL----RGWCKREKGSLMLVYDYM 444
             +A+K+IS  E+    +  L EI  L R +H++++G+    R     +   + +V D M
Sbjct: 54  VRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLM 113
Query: 445 ENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKE 504
           E       +++   +  LS +     L  +  G+ Y+H      VLHRD+K SN+LL+  
Sbjct: 114 ETD-----LYKLLKTQHLSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTT 165
Query: 505 MNGRLGDFGLARMH--GHGQVASTTRVVGTVGYLAPEVFSSGRASTQT-DVFGFGILILE 561
            + ++ DFGLAR+    H         V T  Y APE+  + +  T++ D++  G ++ E
Sbjct: 166 CDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAE 225
Query: 562 VLSGRRPIEEGK 573
           +LS  RPI  GK
Sbjct: 226 MLSN-RPIFPGK 236

>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And Drb Length = 373

Iteration: 1
 Score = 77.8 bits (190), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 63/200 (31%), Positives = 104/200 (52%), Gaps = 26/200 (13%)
Query: 389 GAEIAVKRISHEND--GGTRAFLAEISSLGRLKHKSLVGLRGWCK-------REKGSLML 439
           G ++A+K++  EN+  G     L EI  L  LKH+++V L   C+       R KGS+ L
Sbjct: 43  GQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYL 102
Query: 440 VYDYMEN---GSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKS 496
           V+D+ E+   G L   + +       +  E  RV++ +  G+ Y+H     K+LHRD+K+
Sbjct: 103 VFDFCEHDLAGLLSNVLVK------FTLSEIKRVMQMLLNGLYYIHRN---KILHRDMKA 153
Query: 497 SNVLLDKEMNGRLGDFGLARMHGHGQVASTTRV---VGTVGYLAPEVFSSGRA-STQTDV 552
           +NVL+ ++   +L DFGLAR     + +   R    V T+ Y  PE+    R      D+
Sbjct: 154 ANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPPELLLGERDYGPPIDL 213
Query: 553 FGFGILILEVLSGRRPIEEG 572
           +G G ++ E+ + R PI +G
Sbjct: 214 WGAGCIMAEMWT-RSPIMQG 232

>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880 (Gsk1 Length = 302

Iteration: 1
 Score = 77.8 bits (190), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 66/252 (26%), Positives = 119/252 (47%), Gaps = 22/252 (8%)
Query: 386 EGGGAEIAVKRISHEND-GGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYM 444
           +G     AVK ++   D G    FL E   +    H +++ L G C R +GS ++V  YM
Sbjct: 53  DGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYM 112
Query: 445 ENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKE 504
           ++G L  +I   + +   + ++ I     VA G+ YL     KK +HRD+ + N +LD++
Sbjct: 113 KHGDLRNFIR--NETHNPTVKDLIGFGLQVAKGMKYLAS---KKFVHRDLAARNCMLDEK 167
Query: 505 MNGRLGDFGLARMHGHGQVASTTRVVGT---VGYLAPEVFSSGRASTQTDVFGFGILILE 561
              ++ DFGLAR     +  S     G    V ++A E   + + +T++DV+ FG+L+ E
Sbjct: 168 FTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWE 227
Query: 562 VLSGRRPIEEGKPNLVEMVWELMVQGKXXXXXXXXXXXKGGFDEDEVERVLHLGLLCAYP 621
           +++   P           V+  ++QG+           +  +  D +  V+   L C +P
Sbjct: 228 LMTRGAPPYPDVNTFDITVY--LLQGR--------RLLQPEYCPDPLYEVM---LKCWHP 274
Query: 622 DPRARPTMRQVV 633
               RP+  ++V
Sbjct: 275 KAEMRPSFSELV 286

>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor. Length = 310

Iteration: 1
 Score = 77.8 bits (190), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 66/252 (26%), Positives = 119/252 (47%), Gaps = 22/252 (8%)
Query: 386 EGGGAEIAVKRISHEND-GGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYM 444
           +G     AVK ++   D G    FL E   +    H +++ L G C R +GS ++V  YM
Sbjct: 55  DGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYM 114
Query: 445 ENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKE 504
           ++G L  +I   + +   + ++ I     VA G+ YL     KK +HRD+ + N +LD++
Sbjct: 115 KHGDLRNFIR--NETHNPTVKDLIGFGLQVAKGMKYLAS---KKFVHRDLAARNCMLDEK 169
Query: 505 MNGRLGDFGLARMHGHGQVASTTRVVGT---VGYLAPEVFSSGRASTQTDVFGFGILILE 561
              ++ DFGLAR     +  S     G    V ++A E   + + +T++DV+ FG+L+ E
Sbjct: 170 FTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWE 229
Query: 562 VLSGRRPIEEGKPNLVEMVWELMVQGKXXXXXXXXXXXKGGFDEDEVERVLHLGLLCAYP 621
           +++   P           V+  ++QG+           +  +  D +  V+   L C +P
Sbjct: 230 LMTRGAPPYPDVNTFDITVY--LLQGR--------RLLQPEYCPDPLYEVM---LKCWHP 276
Query: 622 DPRARPTMRQVV 633
               RP+  ++V
Sbjct: 277 KAEMRPSFSELV 288

>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor Length = 298

Iteration: 1
 Score = 77.8 bits (190), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 66/252 (26%), Positives = 119/252 (47%), Gaps = 22/252 (8%)
Query: 386 EGGGAEIAVKRISHEND-GGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYM 444
           +G     AVK ++   D G    FL E   +    H +++ L G C R +GS ++V  YM
Sbjct: 50  DGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYM 109
Query: 445 ENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKE 504
           ++G L  +I   + +   + ++ I     VA G+ YL     KK +HRD+ + N +LD++
Sbjct: 110 KHGDLRNFIR--NETHNPTVKDLIGFGLQVAKGMKYLAS---KKFVHRDLAARNCMLDEK 164
Query: 505 MNGRLGDFGLARMHGHGQVASTTRVVGT---VGYLAPEVFSSGRASTQTDVFGFGILILE 561
              ++ DFGLAR     +  S     G    V ++A E   + + +T++DV+ FG+L+ E
Sbjct: 165 FTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWE 224
Query: 562 VLSGRRPIEEGKPNLVEMVWELMVQGKXXXXXXXXXXXKGGFDEDEVERVLHLGLLCAYP 621
           +++   P           V+  ++QG+           +  +  D +  V+   L C +P
Sbjct: 225 LMTRGAPPYPDVNTFDITVY--LLQGR--------RLLQPEYCPDPLYEVM---LKCWHP 271
Query: 622 DPRARPTMRQVV 633
               RP+  ++V
Sbjct: 272 KAEMRPSFSELV 283

>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor Length = 292

Iteration: 1
 Score = 77.8 bits (190), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 66/252 (26%), Positives = 119/252 (47%), Gaps = 22/252 (8%)
Query: 386 EGGGAEIAVKRISHEND-GGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYM 444
           +G     AVK ++   D G    FL E   +    H +++ L G C R +GS ++V  YM
Sbjct: 47  DGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYM 106
Query: 445 ENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKE 504
           ++G L  +I   + +   + ++ I     VA G+ YL     KK +HRD+ + N +LD++
Sbjct: 107 KHGDLRNFIR--NETHNPTVKDLIGFGLQVAKGMKYLAS---KKFVHRDLAARNCMLDEK 161
Query: 505 MNGRLGDFGLARMHGHGQVASTTRVVGT---VGYLAPEVFSSGRASTQTDVFGFGILILE 561
              ++ DFGLAR     +  S     G    V ++A E   + + +T++DV+ FG+L+ E
Sbjct: 162 FTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWE 221
Query: 562 VLSGRRPIEEGKPNLVEMVWELMVQGKXXXXXXXXXXXKGGFDEDEVERVLHLGLLCAYP 621
           +++   P           V+  ++QG+           +  +  D +  V+   L C +P
Sbjct: 222 LMTRGAPPYPDVNTFDITVY--LLQGR--------RLLQPEYCPDPLYEVM---LKCWHP 268
Query: 622 DPRARPTMRQVV 633
               RP+  ++V
Sbjct: 269 KAEMRPSFSELV 280

>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 Length = 331

Iteration: 1
 Score = 77.8 bits (190), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 63/200 (31%), Positives = 104/200 (52%), Gaps = 26/200 (13%)
Query: 389 GAEIAVKRISHEND--GGTRAFLAEISSLGRLKHKSLVGLRGWCK-------REKGSLML 439
           G ++A+K++  EN+  G     L EI  L  LKH+++V L   C+       R KGS+ L
Sbjct: 43  GQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYL 102
Query: 440 VYDYMEN---GSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKS 496
           V+D+ E+   G L   + +       +  E  RV++ +  G+ Y+H     K+LHRD+K+
Sbjct: 103 VFDFCEHDLAGLLSNVLVK------FTLSEIKRVMQMLLNGLYYIHRN---KILHRDMKA 153
Query: 497 SNVLLDKEMNGRLGDFGLARMHGHGQVASTTRV---VGTVGYLAPEVFSSGRA-STQTDV 552
           +NVL+ ++   +L DFGLAR     + +   R    V T+ Y  PE+    R      D+
Sbjct: 154 ANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPPELLLGERDYGPPIDL 213
Query: 553 FGFGILILEVLSGRRPIEEG 572
           +G G ++ E+ + R PI +G
Sbjct: 214 WGAGCIMAEMWT-RSPIMQG 232

>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain Of C-Met Length = 306

Iteration: 1
 Score = 77.4 bits (189), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 66/252 (26%), Positives = 119/252 (47%), Gaps = 22/252 (8%)
Query: 386 EGGGAEIAVKRISHEND-GGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYM 444
           +G     AVK ++   D G    FL E   +    H +++ L G C R +GS ++V  YM
Sbjct: 52  DGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYM 111
Query: 445 ENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKE 504
           ++G L  +I   + +   + ++ I     VA G+ YL     KK +HRD+ + N +LD++
Sbjct: 112 KHGDLRNFIR--NETHNPTVKDLIGFGLQVAKGMKYLAS---KKFVHRDLAARNCMLDEK 166
Query: 505 MNGRLGDFGLARMHGHGQVASTTRVVGT---VGYLAPEVFSSGRASTQTDVFGFGILILE 561
              ++ DFGLAR     +  S     G    V ++A E   + + +T++DV+ FG+L+ E
Sbjct: 167 FTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWE 226
Query: 562 VLSGRRPIEEGKPNLVEMVWELMVQGKXXXXXXXXXXXKGGFDEDEVERVLHLGLLCAYP 621
           +++   P           V+  ++QG+           +  +  D +  V+   L C +P
Sbjct: 227 LMTRGAPPYPDVNTFDITVY--LLQGR--------RLLQPEYCPDPLYEVM---LKCWHP 273
Query: 622 DPRARPTMRQVV 633
               RP+  ++V
Sbjct: 274 KAEMRPSFSELV 285

>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1) Length = 307

Iteration: 1
 Score = 77.4 bits (189), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 54/188 (28%), Positives = 98/188 (52%), Gaps = 17/188 (9%)
Query: 388 GGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENG 447
           G   + + ++        +AF  E++ L + +H +++   G+    K +L +V  + E  
Sbjct: 59  GDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMT--KDNLAIVTQWCEGS 116
Query: 448 SLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNG 507
           SL K +   +    +   + I + +  A G+ YLH    K ++HRD+KS+N+ L + +  
Sbjct: 117 SLYKHLHVQETKFQMF--QLIDIARQTAQGMDYLHA---KNIIHRDMKSNNIFLHEGLTV 171
Query: 508 RLGDFGLA----RMHGHGQVASTTRVVGTVGYLAPEVF---SSGRASTQTDVFGFGILIL 560
           ++GDFGLA    R  G  QV   T   G+V ++APEV     +   S Q+DV+ +GI++ 
Sbjct: 172 KIGDFGLATVKSRWSGSQQVEQPT---GSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLY 228
Query: 561 EVLSGRRP 568
           E+++G  P
Sbjct: 229 ELMTGELP 236

>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase Length = 318

Iteration: 1
 Score = 77.4 bits (189), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 66/252 (26%), Positives = 119/252 (47%), Gaps = 22/252 (8%)
Query: 386 EGGGAEIAVKRISHEND-GGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYM 444
           +G     AVK ++   D G    FL E   +    H +++ L G C R +GS ++V  YM
Sbjct: 73  DGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYM 132
Query: 445 ENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKE 504
           ++G L  +I   + +   + ++ I     VA G+ YL     KK +HRD+ + N +LD++
Sbjct: 133 KHGDLRNFIR--NETHNPTVKDLIGFGLQVAKGMKYLAS---KKFVHRDLAARNCMLDEK 187
Query: 505 MNGRLGDFGLARMHGHGQVASTTRVVGT---VGYLAPEVFSSGRASTQTDVFGFGILILE 561
              ++ DFGLAR     +  S     G    V ++A E   + + +T++DV+ FG+L+ E
Sbjct: 188 FTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWE 247
Query: 562 VLSGRRPIEEGKPNLVEMVWELMVQGKXXXXXXXXXXXKGGFDEDEVERVLHLGLLCAYP 621
           +++   P           V+  ++QG+           +  +  D +  V+   L C +P
Sbjct: 248 LMTRGAPPYPDVNTFDITVY--LLQGR--------RLLQPEYCPDPLYEVM---LKCWHP 294
Query: 622 DPRARPTMRQVV 633
               RP+  ++V
Sbjct: 295 KAEMRPSFSELV 306

>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk Docking Peptide Length = 362

Iteration: 1
 Score = 77.0 bits (188), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 57/192 (29%), Positives = 96/192 (50%), Gaps = 17/192 (8%)
Query: 390 AEIAVKRIS-HENDGGTRAFLAEISSLGRLKHKSLVGL----RGWCKREKGSLMLVYDYM 444
             +A+K+IS  E+    +  L EI  L   +H++++G+    R     +   + +V D M
Sbjct: 51  VRVAIKKISPFEHQTYCQRTLREIKILLAFRHENIIGINDIIRAPTIEQMKDVYIVQDLM 110
Query: 445 ENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKE 504
           E       +++   +  LS +     L  +  G+ Y+H      VLHRD+K SN+LL+  
Sbjct: 111 ETD-----LYKLLKTQHLSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTT 162
Query: 505 MNGRLGDFGLARMH--GHGQVASTTRVVGTVGYLAPEVFSSGRASTQT-DVFGFGILILE 561
            + ++ DFGLAR+    H      T  V T  Y APE+  + +  T++ D++  G ++ E
Sbjct: 163 CDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAE 222
Query: 562 VLSGRRPIEEGK 573
           +LS  RPI  GK
Sbjct: 223 MLSN-RPIFPGK 233

>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of The Saccharomyces Cerevisiae Ampk Homolog Snf1 Length = 271

Iteration: 1
 Score = 77.0 bits (188), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 52/162 (32%), Positives = 85/162 (52%), Gaps = 11/162 (6%)
Query: 411 EISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRV 470
           EIS L  L+H  ++ L    K  K  +++V +Y  N   D +I Q D    +S +E  R 
Sbjct: 54  EISYLRLLRHPHIIKLYDVIK-SKDEIIMVIEYAGNELFD-YIVQRDK---MSEQEARRF 108
Query: 471 LKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRVV 530
            + + + V Y H     K++HRD+K  N+LLD+ +N ++ DFGL+ +   G    T+   
Sbjct: 109 FQQIISAVEYCHR---HKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTS--C 163
Query: 531 GTVGYLAPEVFSSG-RASTQTDVFGFGILILEVLSGRRPIEE 571
           G+  Y APEV S    A  + DV+  G+++  +L  R P ++
Sbjct: 164 GSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDD 205

>pdb|3A4O|X Chain X, Lyn Kinase Domain Length = 286

Iteration: 1
 Score = 77.0 bits (188), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 48/166 (28%), Positives = 90/166 (54%), Gaps = 6/166 (3%)
Query: 404 GTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLS 463
             +AFL E + +  L+H  LV L     RE+  + ++ +YM  GSL  ++   +G  +L 
Sbjct: 51  SVQAFLEEANLMKTLQHDKLVRLYAVVTREE-PIYIITEYMAKGSLLDFLKSDEGGKVL- 108
Query: 464 CEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQV 523
             + I     +A G+ Y+     K  +HRD++++NVL+ + +  ++ DFGLAR+    + 
Sbjct: 109 LPKLIDFSAQIAEGMAYIER---KNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEY 165
Query: 524 ASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLS-GRRP 568
            +       + + APE  + G  + ++DV+ FGIL+ E+++ G+ P
Sbjct: 166 TAREGAKFPIKWTAPEAINFGCFTIKSDVWSFGILLYEIVTYGKIP 211

>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast Snf1 Length = 274

Iteration: 1
 Score = 77.0 bits (188), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 52/162 (32%), Positives = 85/162 (52%), Gaps = 11/162 (6%)
Query: 411 EISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRV 470
           EIS L  L+H  ++ L    K  K  +++V +Y  N   D +I Q D    +S +E  R 
Sbjct: 58  EISYLRLLRHPHIIKLYDVIK-SKDEIIMVIEYAGNELFD-YIVQRDK---MSEQEARRF 112
Query: 471 LKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRVV 530
            + + + V Y H     K++HRD+K  N+LLD+ +N ++ DFGL+ +   G    T+   
Sbjct: 113 FQQIISAVEYCHR---HKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTS--C 167
Query: 531 GTVGYLAPEVFSSG-RASTQTDVFGFGILILEVLSGRRPIEE 571
           G+  Y APEV S    A  + DV+  G+++  +L  R P ++
Sbjct: 168 GSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDD 209

>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain Length = 298

Iteration: 1
 Score = 76.6 bits (187), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 49/185 (26%), Positives = 96/185 (51%), Gaps = 14/185 (7%)
Query: 386 EGGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKRE-KGSLMLVYDYM 444
           +  G  +AVK++ H  +   R F  EI  L  L+H ++V  +G C    + +L L+ +Y+
Sbjct: 39  DNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYL 98
Query: 445 ENGSLDKWIFQCDGSMMLSCEERIRVLK---DVAAGVLYLHEGWEKKVLHRDIKSSNVLL 501
             GSL  ++ Q     +    + I++L+    +  G+ YL     K+ +HRD+ + N+L+
Sbjct: 99  PYGSLRDYL-QAHAERI----DHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILV 150
Query: 502 DKEMNGRLGDFGLARMHGHGQVASTTRVVGT--VGYLAPEVFSSGRASTQTDVFGFGILI 559
           + E   ++GDFGL ++    +     +  G   + + APE  +  + S  +DV+ FG+++
Sbjct: 151 ENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVL 210
Query: 560 LEVLS 564
            E+ +
Sbjct: 211 YELFT 215

>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors Length = 293

Iteration: 1
 Score = 76.6 bits (187), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 48/185 (25%), Positives = 96/185 (51%), Gaps = 14/185 (7%)
Query: 386 EGGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKRE-KGSLMLVYDYM 444
           +  G  +AVK++ H  +   R F  EI  L  L+H ++V  +G C    + +L L+ +Y+
Sbjct: 35  DNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYL 94
Query: 445 ENGSLDKWIFQCDGSMMLSCEERIRVLK---DVAAGVLYLHEGWEKKVLHRDIKSSNVLL 501
             GSL  ++ +    +     + I++L+    +  G+ YL     K+ +HRD+ + N+L+
Sbjct: 95  PYGSLRDYLQKHKERI-----DHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILV 146
Query: 502 DKEMNGRLGDFGLARMHGHGQVASTTRVVGT--VGYLAPEVFSSGRASTQTDVFGFGILI 559
           + E   ++GDFGL ++    +     +  G   + + APE  +  + S  +DV+ FG+++
Sbjct: 147 ENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVL 206
Query: 560 LEVLS 564
            E+ +
Sbjct: 207 YELFT 211

>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast Amp-Activated Protein Kinase Snf1 Length = 275

Iteration: 1
 Score = 76.6 bits (187), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 52/162 (32%), Positives = 85/162 (52%), Gaps = 11/162 (6%)
Query: 411 EISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRV 470
           EIS L  L+H  ++ L    K  K  +++V +Y  N   D +I Q D    +S +E  R 
Sbjct: 63  EISYLRLLRHPHIIKLYDVIK-SKDEIIMVIEYAGNELFD-YIVQRDK---MSEQEARRF 117
Query: 471 LKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRVV 530
            + + + V Y H     K++HRD+K  N+LLD+ +N ++ DFGL+ +   G    T+   
Sbjct: 118 FQQIISAVEYCHR---HKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTS--C 172
Query: 531 GTVGYLAPEVFSSG-RASTQTDVFGFGILILEVLSGRRPIEE 571
           G+  Y APEV S    A  + DV+  G+++  +L  R P ++
Sbjct: 173 GSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDD 214

>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A 1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor Length = 303

Iteration: 1
 Score = 76.6 bits (187), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 48/185 (25%), Positives = 96/185 (51%), Gaps = 14/185 (7%)
Query: 386 EGGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKRE-KGSLMLVYDYM 444
           +  G  +AVK++ H  +   R F  EI  L  L+H ++V  +G C    + +L L+ +Y+
Sbjct: 40  DNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYL 99
Query: 445 ENGSLDKWIFQCDGSMMLSCEERIRVLK---DVAAGVLYLHEGWEKKVLHRDIKSSNVLL 501
             GSL  ++ +    +     + I++L+    +  G+ YL     K+ +HRD+ + N+L+
Sbjct: 100 PYGSLRDYLQKHKERI-----DHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILV 151
Query: 502 DKEMNGRLGDFGLARMHGHGQVASTTRVVG--TVGYLAPEVFSSGRASTQTDVFGFGILI 559
           + E   ++GDFGL ++    +     +  G   + + APE  +  + S  +DV+ FG+++
Sbjct: 152 ENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVL 211
Query: 560 LEVLS 564
            E+ +
Sbjct: 212 YELFT 216

>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk Length = 476

Iteration: 1
 Score = 76.6 bits (187), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 53/175 (30%), Positives = 87/175 (49%), Gaps = 13/175 (7%)
Query: 411 EISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRV 470
           EI +L   +H  ++ L          + +V +Y+  G L  +I  C    +   E R R+
Sbjct: 66  EIQNLKLFRHPHIIKLYQVIS-TPSDIFMVMEYVSGGELFDYI--CKNGRLDEKESR-RL 121
Query: 471 LKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRVV 530
            + + +GV Y H      V+HRD+K  NVLLD  MN ++ DFGL+ M   G+    +   
Sbjct: 122 FQQILSGVDYCHRHM---VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRXS--C 176
Query: 531 GTVGYLAPEVFSSGR--ASTQTDVFGFGILILEVLSGRRPIEEGK-PNLVEMVWE 582
           G+  Y APEV  SGR  A  + D++  G+++  +L G  P ++   P L + + +
Sbjct: 177 GSPNYAAPEVI-SGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVPTLFKKICD 230

>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain Length = 283

Iteration: 1
 Score = 76.6 bits (187), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 52/162 (32%), Positives = 85/162 (52%), Gaps = 11/162 (6%)
Query: 411 EISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRV 470
           EIS L  L+H  ++ L    K  K  +++V +Y  N   D +I Q D    +S +E  R 
Sbjct: 64  EISYLRLLRHPHIIKLYDVIK-SKDEIIMVIEYAGNELFD-YIVQRDK---MSEQEARRF 118
Query: 471 LKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRVV 530
            + + + V Y H     K++HRD+K  N+LLD+ +N ++ DFGL+ +   G    T+   
Sbjct: 119 FQQIISAVEYCHR---HKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTS--C 173
Query: 531 GTVGYLAPEVFSSG-RASTQTDVFGFGILILEVLSGRRPIEE 571
           G+  Y APEV S    A  + DV+  G+++  +L  R P ++
Sbjct: 174 GSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDD 215

>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 326

Iteration: 1
 Score = 76.6 bits (187), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 48/185 (25%), Positives = 96/185 (51%), Gaps = 14/185 (7%)
Query: 386 EGGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKRE-KGSLMLVYDYM 444
           +  G  +AVK++ H  +   R F  EI  L  L+H ++V  +G C    + +L L+ +Y+
Sbjct: 67  DNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYL 126
Query: 445 ENGSLDKWIFQCDGSMMLSCEERIRVLK---DVAAGVLYLHEGWEKKVLHRDIKSSNVLL 501
             GSL  ++ +    +     + I++L+    +  G+ YL     K+ +HRD+ + N+L+
Sbjct: 127 PYGSLRDYLQKHKERI-----DHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILV 178
Query: 502 DKEMNGRLGDFGLARMHGHGQVASTTRVVG--TVGYLAPEVFSSGRASTQTDVFGFGILI 559
           + E   ++GDFGL ++    +     +  G   + + APE  +  + S  +DV+ FG+++
Sbjct: 179 ENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVL 238
Query: 560 LEVLS 564
            E+ +
Sbjct: 239 YELFT 243

>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg- 1009247 Length = 270

Iteration: 1
 Score = 76.6 bits (187), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 45/163 (27%), Positives = 89/163 (54%), Gaps = 7/163 (4%)
Query: 407 AFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEE 466
           AFLAE + +  L+H  LV L     +E   + ++ ++M  GSL  ++   +GS      +
Sbjct: 56  AFLAEANVMKTLQHDKLVKLHAVVTKE--PIYIITEFMAKGSLLDFLKSDEGSKQ-PLPK 112
Query: 467 RIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVAST 526
            I     +A G+ ++ +   +  +HRD++++N+L+   +  ++ DFGLAR+    +  + 
Sbjct: 113 LIDFSAQIAEGMAFIEQ---RNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAR 169
Query: 527 TRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLS-GRRP 568
                 + + APE  + G  + ++DV+ FGIL++E+++ GR P
Sbjct: 170 EGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIP 212

>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A Potent And Specific Pan-Janus Kinase Inhibitor Length = 293

Iteration: 1
 Score = 76.6 bits (187), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 48/185 (25%), Positives = 96/185 (51%), Gaps = 14/185 (7%)
Query: 386 EGGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKRE-KGSLMLVYDYM 444
           +  G  +AVK++ H  +   R F  EI  L  L+H ++V  +G C    + +L L+ +Y+
Sbjct: 34  DNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYL 93
Query: 445 ENGSLDKWIFQCDGSMMLSCEERIRVLK---DVAAGVLYLHEGWEKKVLHRDIKSSNVLL 501
             GSL  ++ +    +     + I++L+    +  G+ YL     K+ +HRD+ + N+L+
Sbjct: 94  PYGSLRDYLQKHKERI-----DHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILV 145
Query: 502 DKEMNGRLGDFGLARMHGHGQVASTTRVVGT--VGYLAPEVFSSGRASTQTDVFGFGILI 559
           + E   ++GDFGL ++    +     +  G   + + APE  +  + S  +DV+ FG+++
Sbjct: 146 ENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVL 205
Query: 560 LEVLS 564
            E+ +
Sbjct: 206 YELFT 210

>pdb|3IPV|B Chain B, Crystal Structure Of Spatholobus Parviflorus Seed Lectin Length = 239

Iteration: 1
 Score = 76.6 bits (187), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 79/267 (29%), Positives = 124/267 (46%), Gaps = 55/267 (20%)
Query: 28  FVFNGFNS--SNLSLYGTATVE-SRILTLTNSTT------FTIGRALYPSKIPTKRPNSS 78
           FVF+ F     NL L G A V  + +L LTN  +       ++GRA Y + I      + 
Sbjct: 6   FVFSKFKPLEPNLILQGDALVTVAGVLQLTNVDSNGVPEPSSLGRATYSAPINIWDSATG 65
Query: 79  YVYPFSTSFIFAM-APYKGVLAGHGLVFLFVPFHGIKGATEAQ--HLGLFNRTNDGNSSN 135
            V  F+TSF F + AP    +A  GL F   P   +  A ++    LGLF+    G+++ 
Sbjct: 66  LVASFATSFRFTIYAPNIATIA-DGLAFFLAP---VASAPDSGGGFLGLFDSAV-GDTTY 120
Query: 136 HVFGVEFDVFKNQEFNDIDENHVGIDVNSLTSVSAHAAGYWPDNQXXXXXXXXXXXXXXX 195
               VEFD ++N  F D    H+G DVNS++S+                           
Sbjct: 121 QTVAVEFDTYENTVFTDPPYTHIGFDVNSISSI--------------------------- 153
Query: 196 EKSFKELKLNNGKNYQVWIDYADSFINITMVEAGMKRPKRP---LLSVPLNLSGVLEDEM 252
            K+ K   L NG+  +V I Y  +   + ++ A +  P      +L+  ++LS VL + +
Sbjct: 154 -KTVK-WSLANGEAAKVLITYNSA---VKLLVASLVYPSSKTSFILADIVDLSSVLPEWV 208
Query: 253 YVGFTAATGQ---LVESHKILAWSFSN 276
            VGF+AATG     +E+H + +WSF++
Sbjct: 209 RVGFSAATGASKGYIETHDVFSWSFAS 235

>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In Complex With Staurosporine Length = 310

Iteration: 1
 Score = 76.6 bits (187), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 53/188 (28%), Positives = 93/188 (49%), Gaps = 19/188 (10%)
Query: 389 GAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGS 448
           G  + +K +   ++   R FL E+  +  L+H +++   G   ++K  L  + +Y++ G+
Sbjct: 35  GEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDK-RLNFITEYIKGGT 93
Query: 449 LDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGR 508
           L   I   D     S  +R+   KD+A+G+ YLH      ++HRD+ S N L+ +  N  
Sbjct: 94  LRGIIKSMDSQYPWS--QRVSFAKDIASGMAYLHS---MNIIHRDLNSHNCLVRENKNVV 148
Query: 509 LGDFGLARM--------HGHGQVASTTR-----VVGTVGYLAPEVFSSGRASTQTDVFGF 555
           + DFGLAR+         G   +    R     VVG   ++APE+ +      + DVF F
Sbjct: 149 VADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSF 208
Query: 556 GILILEVL 563
           GI++ E++
Sbjct: 209 GIVLCEII 216

>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Hepatocyte Growth Factor Receptor C-Met In Complex With The Microbial Alkaloid K-252a Length = 312

Iteration: 1
 Score = 76.6 bits (187), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 65/252 (25%), Positives = 119/252 (47%), Gaps = 22/252 (8%)
Query: 386 EGGGAEIAVKRISHEND-GGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYM 444
           +G     AVK ++   D G    FL E   +    H +++ L G C R +GS ++V  YM
Sbjct: 53  DGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYM 112
Query: 445 ENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKE 504
           ++G L  +I   + +   + ++ I     VA G+ +L     KK +HRD+ + N +LD++
Sbjct: 113 KHGDLRNFIR--NETHNPTVKDLIGFGLQVAKGMKFLAS---KKFVHRDLAARNCMLDEK 167
Query: 505 MNGRLGDFGLARMHGHGQVASTTRVVGT---VGYLAPEVFSSGRASTQTDVFGFGILILE 561
              ++ DFGLAR     +  S     G    V ++A E   + + +T++DV+ FG+L+ E
Sbjct: 168 FTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWE 227
Query: 562 VLSGRRPIEEGKPNLVEMVWELMVQGKXXXXXXXXXXXKGGFDEDEVERVLHLGLLCAYP 621
           +++   P           V+  ++QG+           +  +  D +  V+   L C +P
Sbjct: 228 LMTRGAPPYPDVNTFDITVY--LLQGR--------RLLQPEYCPDPLYEVM---LKCWHP 274
Query: 622 DPRARPTMRQVV 633
               RP+  ++V
Sbjct: 275 KAEMRPSFSELV 286

>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Hepatocyte Growth Factor Receptor C-Met In Complex With A Aminopyridine Based Inhibitor Length = 314

Iteration: 1
 Score = 76.6 bits (187), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 65/252 (25%), Positives = 119/252 (47%), Gaps = 22/252 (8%)
Query: 386 EGGGAEIAVKRISHEND-GGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYM 444
           +G     AVK ++   D G    FL E   +    H +++ L G C R +GS ++V  YM
Sbjct: 55  DGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYM 114
Query: 445 ENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKE 504
           ++G L  +I   + +   + ++ I     VA G+ +L     KK +HRD+ + N +LD++
Sbjct: 115 KHGDLRNFIR--NETHNPTVKDLIGFGLQVAKGMKFLAS---KKFVHRDLAARNCMLDEK 169
Query: 505 MNGRLGDFGLARMHGHGQVASTTRVVGT---VGYLAPEVFSSGRASTQTDVFGFGILILE 561
              ++ DFGLAR     +  S     G    V ++A E   + + +T++DV+ FG+L+ E
Sbjct: 170 FTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWE 229
Query: 562 VLSGRRPIEEGKPNLVEMVWELMVQGKXXXXXXXXXXXKGGFDEDEVERVLHLGLLCAYP 621
           +++   P           V+  ++QG+           +  +  D +  V+   L C +P
Sbjct: 230 LMTRGAPPYPDVNTFDITVY--LLQGR--------RLLQPEYCPDPLYEVM---LKCWHP 276
Query: 622 DPRARPTMRQVV 633
               RP+  ++V
Sbjct: 277 KAEMRPSFSELV 288

>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine Inhibitor Length = 301

Iteration: 1
 Score = 76.6 bits (187), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 48/185 (25%), Positives = 96/185 (51%), Gaps = 14/185 (7%)
Query: 386 EGGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKRE-KGSLMLVYDYM 444
           +  G  +AVK++ H  +   R F  EI  L  L+H ++V  +G C    + +L L+ +Y+
Sbjct: 36  DNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYL 95
Query: 445 ENGSLDKWIFQCDGSMMLSCEERIRVLK---DVAAGVLYLHEGWEKKVLHRDIKSSNVLL 501
             GSL  ++ +    +     + I++L+    +  G+ YL     K+ +HRD+ + N+L+
Sbjct: 96  PYGSLRDYLQKHKERI-----DHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILV 147
Query: 502 DKEMNGRLGDFGLARMHGHGQVASTTRVVGT--VGYLAPEVFSSGRASTQTDVFGFGILI 559
           + E   ++GDFGL ++    +     +  G   + + APE  +  + S  +DV+ FG+++
Sbjct: 148 ENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVL 207
Query: 560 LEVLS 564
            E+ +
Sbjct: 208 YELFT 212

>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8 Length = 300

Iteration: 1
 Score = 76.6 bits (187), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 48/185 (25%), Positives = 96/185 (51%), Gaps = 14/185 (7%)
Query: 386 EGGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKRE-KGSLMLVYDYM 444
           +  G  +AVK++ H  +   R F  EI  L  L+H ++V  +G C    + +L L+ +Y+
Sbjct: 41  DNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYL 100
Query: 445 ENGSLDKWIFQCDGSMMLSCEERIRVLK---DVAAGVLYLHEGWEKKVLHRDIKSSNVLL 501
             GSL  ++ +    +     + I++L+    +  G+ YL     K+ +HRD+ + N+L+
Sbjct: 101 PYGSLRDYLQKHKERI-----DHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILV 152
Query: 502 DKEMNGRLGDFGLARMHGHGQVASTTRVVGT--VGYLAPEVFSSGRASTQTDVFGFGILI 559
           + E   ++GDFGL ++    +     +  G   + + APE  +  + S  +DV+ FG+++
Sbjct: 153 ENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVL 212
Query: 560 LEVLS 564
            E+ +
Sbjct: 213 YELFT 217

>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment Inhibitor 1f8 Length = 316

Iteration: 1
 Score = 76.6 bits (187), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 48/168 (28%), Positives = 86/168 (51%), Gaps = 8/168 (4%)
Query: 411 EISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRV 470
           E   + RL H   V L  +C ++   L     Y +NG L K+I +  GS   +C      
Sbjct: 87  ERDVMSRLDHPFFVKLY-FCFQDDEKLYFGLSYAKNGELLKYIRKI-GSFDETCTRFYTA 144
Query: 471 LKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLAR-MHGHGQVASTTRV 529
             ++ + + YLH    K ++HRD+K  N+LL+++M+ ++ DFG A+ +    + A     
Sbjct: 145 --EIVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF 199
Query: 530 VGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLV 577
           VGT  Y++PE+ +   A   +D++  G +I ++++G  P   G   L+
Sbjct: 200 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLI 247

>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2 Length = 301

Iteration: 1
 Score = 76.6 bits (187), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 48/185 (25%), Positives = 96/185 (51%), Gaps = 14/185 (7%)
Query: 386 EGGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKRE-KGSLMLVYDYM 444
           +  G  +AVK++ H  +   R F  EI  L  L+H ++V  +G C    + +L L+ +Y+
Sbjct: 42  DNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYL 101
Query: 445 ENGSLDKWIFQCDGSMMLSCEERIRVLK---DVAAGVLYLHEGWEKKVLHRDIKSSNVLL 501
             GSL  ++ +    +     + I++L+    +  G+ YL     K+ +HRD+ + N+L+
Sbjct: 102 PYGSLRDYLQKHKERI-----DHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILV 153
Query: 502 DKEMNGRLGDFGLARMHGHGQVASTTRVVGT--VGYLAPEVFSSGRASTQTDVFGFGILI 559
           + E   ++GDFGL ++    +     +  G   + + APE  +  + S  +DV+ FG+++
Sbjct: 154 ENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVL 213
Query: 560 LEVLS 564
            E+ +
Sbjct: 214 YELFT 218

>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk Docking Peptide Length = 362

Iteration: 1
 Score = 76.3 bits (186), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 57/190 (30%), Positives = 96/190 (50%), Gaps = 17/190 (8%)
Query: 392 IAVKRIS-HENDGGTRAFLAEISSLGRLKHKSLVGL----RGWCKREKGSLMLVYDYMEN 446
           +A+K+IS  E+    +  L EI  L   +H++++G+    R     +   + +V D ME 
Sbjct: 53  VAIKKISPFEHQTYCQRTLREIKILLAFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET 112
Query: 447 GSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMN 506
                 +++   +  LS +     L  +  G+ Y+H      VLHRD+K SN+LL+   +
Sbjct: 113 D-----LYKLLKTQHLSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTSD 164
Query: 507 GRLGDFGLARMH--GHGQVASTTRVVGTVGYLAPEVFSSGRASTQT-DVFGFGILILEVL 563
            ++ DFGLAR+    H      T  V T  Y APE+  + +  T++ D++  G ++ E+L
Sbjct: 165 LKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML 224
Query: 564 SGRRPIEEGK 573
           S  RPI  GK
Sbjct: 225 SN-RPIFPGK 233

>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent 2,8-Diaryl Quinoxaline Inhibitor Length = 295

Iteration: 1
 Score = 76.3 bits (186), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 48/185 (25%), Positives = 96/185 (51%), Gaps = 14/185 (7%)
Query: 386 EGGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKRE-KGSLMLVYDYM 444
           +  G  +AVK++ H  +   R F  EI  L  L+H ++V  +G C    + +L L+ +Y+
Sbjct: 36  DNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYL 95
Query: 445 ENGSLDKWIFQCDGSMMLSCEERIRVLK---DVAAGVLYLHEGWEKKVLHRDIKSSNVLL 501
             GSL  ++ +    +     + I++L+    +  G+ YL     K+ +HRD+ + N+L+
Sbjct: 96  PYGSLRDYLQKHKERI-----DHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILV 147
Query: 502 DKEMNGRLGDFGLARMHGHGQVASTTRVVGT--VGYLAPEVFSSGRASTQTDVFGFGILI 559
           + E   ++GDFGL ++    +     +  G   + + APE  +  + S  +DV+ FG+++
Sbjct: 148 ENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVL 207
Query: 560 LEVLS 564
            E+ +
Sbjct: 208 YELFT 212

>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With 6-Benzyloxyquinoline Inhibitor Length = 319

Iteration: 1
 Score = 76.3 bits (186), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 65/252 (25%), Positives = 119/252 (47%), Gaps = 22/252 (8%)
Query: 386 EGGGAEIAVKRISHEND-GGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYM 444
           +G     AVK ++   D G    FL E   +    H +++ L G C R +GS ++V  YM
Sbjct: 60  DGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYM 119
Query: 445 ENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKE 504
           ++G L  +I   + +   + ++ I     VA G+ +L     KK +HRD+ + N +LD++
Sbjct: 120 KHGDLRNFIR--NETHNPTVKDLIGFGLQVAKGMKFLAS---KKFVHRDLAARNCMLDEK 174
Query: 505 MNGRLGDFGLARMHGHGQVASTTRVVGT---VGYLAPEVFSSGRASTQTDVFGFGILILE 561
              ++ DFGLAR     +  S     G    V ++A E   + + +T++DV+ FG+L+ E
Sbjct: 175 FTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWE 234
Query: 562 VLSGRRPIEEGKPNLVEMVWELMVQGKXXXXXXXXXXXKGGFDEDEVERVLHLGLLCAYP 621
           +++   P           V+  ++QG+           +  +  D +  V+   L C +P
Sbjct: 235 LMTRGAPPYPDVNTFDITVY--LLQGR--------RLLQPEYCPDPLYEVM---LKCWHP 281
Query: 622 DPRARPTMRQVV 633
               RP+  ++V
Sbjct: 282 KAEMRPSFSELV 293

>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972 Length = 314

Iteration: 1
 Score = 76.3 bits (186), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 65/252 (25%), Positives = 119/252 (47%), Gaps = 22/252 (8%)
Query: 386 EGGGAEIAVKRISHEND-GGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYM 444
           +G     AVK ++   D G    FL E   +    H +++ L G C R +GS ++V  YM
Sbjct: 55  DGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYM 114
Query: 445 ENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKE 504
           ++G L  +I   + +   + ++ I     VA G+ +L     KK +HRD+ + N +LD++
Sbjct: 115 KHGDLRNFIR--NETHNPTVKDLIGFGLQVAKGMKFLAS---KKFVHRDLAARNCMLDEK 169
Query: 505 MNGRLGDFGLARMHGHGQVASTTRVVGT---VGYLAPEVFSSGRASTQTDVFGFGILILE 561
              ++ DFGLAR     +  S     G    V ++A E   + + +T++DV+ FG+L+ E
Sbjct: 170 FTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWE 229
Query: 562 VLSGRRPIEEGKPNLVEMVWELMVQGKXXXXXXXXXXXKGGFDEDEVERVLHLGLLCAYP 621
           +++   P           V+  ++QG+           +  +  D +  V+   L C +P
Sbjct: 230 LMTRGAPPYPDVNTFDITVY--LLQGR--------RLLQPEYCPDPLYEVM---LKCWHP 276
Query: 622 DPRARPTMRQVV 633
               RP+  ++V
Sbjct: 277 KAEMRPSFSELV 288

>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8 Length = 298

Iteration: 1
 Score = 76.3 bits (186), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 48/185 (25%), Positives = 96/185 (51%), Gaps = 14/185 (7%)
Query: 386 EGGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKRE-KGSLMLVYDYM 444
           +  G  +AVK++ H  +   R F  EI  L  L+H ++V  +G C    + +L L+ +Y+
Sbjct: 39  DNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYL 98
Query: 445 ENGSLDKWIFQCDGSMMLSCEERIRVLK---DVAAGVLYLHEGWEKKVLHRDIKSSNVLL 501
             GSL  ++ +    +     + I++L+    +  G+ YL     K+ +HRD+ + N+L+
Sbjct: 99  PYGSLRDYLQKHKERI-----DHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILV 150
Query: 502 DKEMNGRLGDFGLARMHGHGQVASTTRVVGT--VGYLAPEVFSSGRASTQTDVFGFGILI 559
           + E   ++GDFGL ++    +     +  G   + + APE  +  + S  +DV+ FG+++
Sbjct: 151 ENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVL 210
Query: 560 LEVLS 564
            E+ +
Sbjct: 211 YELFT 215

>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30 Length = 302

Iteration: 1
 Score = 76.3 bits (186), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 48/185 (25%), Positives = 96/185 (51%), Gaps = 14/185 (7%)
Query: 386 EGGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKRE-KGSLMLVYDYM 444
           +  G  +AVK++ H  +   R F  EI  L  L+H ++V  +G C    + +L L+ +Y+
Sbjct: 43  DNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYL 102
Query: 445 ENGSLDKWIFQCDGSMMLSCEERIRVLK---DVAAGVLYLHEGWEKKVLHRDIKSSNVLL 501
             GSL  ++ +    +     + I++L+    +  G+ YL     K+ +HRD+ + N+L+
Sbjct: 103 PYGSLRDYLQKHKERI-----DHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILV 154
Query: 502 DKEMNGRLGDFGLARMHGHGQVASTTRVVGT--VGYLAPEVFSSGRASTQTDVFGFGILI 559
           + E   ++GDFGL ++    +     +  G   + + APE  +  + S  +DV+ FG+++
Sbjct: 155 ENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVL 214
Query: 560 LEVLS 564
            E+ +
Sbjct: 215 YELFT 219

>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1 Length = 317

Iteration: 1
 Score = 76.3 bits (186), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 65/252 (25%), Positives = 119/252 (47%), Gaps = 22/252 (8%)
Query: 386 EGGGAEIAVKRISHEND-GGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYM 444
           +G     AVK ++   D G    FL E   +    H +++ L G C R +GS ++V  YM
Sbjct: 56  DGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYM 115
Query: 445 ENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKE 504
           ++G L  +I   + +   + ++ I     VA G+ +L     KK +HRD+ + N +LD++
Sbjct: 116 KHGDLRNFIR--NETHNPTVKDLIGFGLQVAKGMKFLAS---KKFVHRDLAARNCMLDEK 170
Query: 505 MNGRLGDFGLARMHGHGQVASTTRVVGT---VGYLAPEVFSSGRASTQTDVFGFGILILE 561
              ++ DFGLAR     +  S     G    V ++A E   + + +T++DV+ FG+L+ E
Sbjct: 171 FTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWE 230
Query: 562 VLSGRRPIEEGKPNLVEMVWELMVQGKXXXXXXXXXXXKGGFDEDEVERVLHLGLLCAYP 621
           +++   P           V+  ++QG+           +  +  D +  V+   L C +P
Sbjct: 231 LMTRGAPPYPDVNTFDITVY--LLQGR--------RLLQPEYCPDPLYEVM---LKCWHP 277
Query: 622 DPRARPTMRQVV 633
               RP+  ++V
Sbjct: 278 KAEMRPSFSELV 289

>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors Length = 311

Iteration: 1
 Score = 76.3 bits (186), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 48/185 (25%), Positives = 96/185 (51%), Gaps = 14/185 (7%)
Query: 386 EGGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKRE-KGSLMLVYDYM 444
           +  G  +AVK++ H  +   R F  EI  L  L+H ++V  +G C    + +L L+ +Y+
Sbjct: 54  DNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYL 113
Query: 445 ENGSLDKWIFQCDGSMMLSCEERIRVLK---DVAAGVLYLHEGWEKKVLHRDIKSSNVLL 501
             GSL  ++ +    +     + I++L+    +  G+ YL     K+ +HRD+ + N+L+
Sbjct: 114 PYGSLRDYLQKHKERI-----DHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILV 165
Query: 502 DKEMNGRLGDFGLARMHGHGQVASTTRVVGT--VGYLAPEVFSSGRASTQTDVFGFGILI 559
           + E   ++GDFGL ++    +     +  G   + + APE  +  + S  +DV+ FG+++
Sbjct: 166 ENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVL 225
Query: 560 LEVLS 564
            E+ +
Sbjct: 226 YELFT 230

>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Hepatocyte Growth Factor Receptor C-Met In Complex With A Pyrrolotriazine Based Inhibitor Length = 373

Iteration: 1
 Score = 76.3 bits (186), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 65/252 (25%), Positives = 119/252 (47%), Gaps = 22/252 (8%)
Query: 386 EGGGAEIAVKRISHEND-GGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYM 444
           +G     AVK ++   D G    FL E   +    H +++ L G C R +GS ++V  YM
Sbjct: 114 DGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYM 173
Query: 445 ENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKE 504
           ++G L  +I   + +   + ++ I     VA G+ +L     KK +HRD+ + N +LD++
Sbjct: 174 KHGDLRNFIR--NETHNPTVKDLIGFGLQVAKGMKFLAS---KKFVHRDLAARNCMLDEK 228
Query: 505 MNGRLGDFGLARMHGHGQVASTTRVVGT---VGYLAPEVFSSGRASTQTDVFGFGILILE 561
              ++ DFGLAR     +  S     G    V ++A E   + + +T++DV+ FG+L+ E
Sbjct: 229 FTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWE 288
Query: 562 VLSGRRPIEEGKPNLVEMVWELMVQGKXXXXXXXXXXXKGGFDEDEVERVLHLGLLCAYP 621
           +++   P           V+  ++QG+           +  +  D +  V+   L C +P
Sbjct: 289 LMTRGAPPYPDVNTFDITVY--LLQGR--------RLLQPEYCPDPLYEVM---LKCWHP 335
Query: 622 DPRARPTMRQVV 633
               RP+  ++V
Sbjct: 336 KAEMRPSFSELV 347

>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1 Length = 317

Iteration: 1
 Score = 75.9 bits (185), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 65/252 (25%), Positives = 119/252 (47%), Gaps = 22/252 (8%)
Query: 386 EGGGAEIAVKRISHEND-GGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYM 444
           +G     AVK ++   D G    FL E   +    H +++ L G C R +GS ++V  YM
Sbjct: 56  DGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYM 115
Query: 445 ENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKE 504
           ++G L  +I   + +   + ++ I     VA G+ +L     KK +HRD+ + N +LD++
Sbjct: 116 KHGDLRNFIR--NETHNPTVKDLIGFGLQVAKGMKFLAS---KKFVHRDLAARNCMLDEK 170
Query: 505 MNGRLGDFGLARMHGHGQVASTTRVVGT---VGYLAPEVFSSGRASTQTDVFGFGILILE 561
              ++ DFGLAR     +  S     G    V ++A E   + + +T++DV+ FG+L+ E
Sbjct: 171 FTVKVADFGLARDMLDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWE 230
Query: 562 VLSGRRPIEEGKPNLVEMVWELMVQGKXXXXXXXXXXXKGGFDEDEVERVLHLGLLCAYP 621
           +++   P           V+  ++QG+           +  +  D +  V+   L C +P
Sbjct: 231 LMTRGAPPYPDVNTFDITVY--LLQGR--------RLLQPEYCPDPLYEVM---LKCWHP 277
Query: 622 DPRARPTMRQVV 633
               RP+  ++V
Sbjct: 278 KAEMRPSFSELV 289

>pdb|3IPV|A Chain A, Crystal Structure Of Spatholobus Parviflorus Seed Lectin Length = 251

Iteration: 1
 Score = 75.9 bits (185), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 79/265 (29%), Positives = 120/265 (45%), Gaps = 51/265 (19%)
Query: 28  FVFNGFNS--SNLSLYGTATVE-SRILTLTN------STTFTIGRALYPSKIPTKRPNSS 78
           FVF+ F     NL L G A V  + +L LTN          ++GRA Y + I      + 
Sbjct: 6   FVFSKFKPLEPNLILQGDALVTVAGVLQLTNVDKNGVPEPSSLGRATYSAPINIWDSATG 65
Query: 79  YVYPFSTSFIFAM-APYKGVLAGHGLVFLFVPFHGIKGATEAQHLGLFNRTNDGNSSNHV 137
            V  F+TSF F + AP    +A  GL F   P       +    LGLF+    G++   V
Sbjct: 66  LVASFATSFRFTIYAPNIATIA-DGLAFFLAPVASAPD-SGGGFLGLFDSAVSGSTYQTV 123
Query: 138 FGVEFDVFKNQEFNDIDENHVGIDVNSLTSVSAHAAGYWPDNQXXXXXXXXXXXXXXXEK 197
             VEFD ++N  F D    H+G DVNS++S+                            K
Sbjct: 124 -AVEFDTYENTVFTDPPYTHIGFDVNSISSI----------------------------K 154
Query: 198 SFKELKLNNGKNYQVWIDYADSFINITMVEAGMKRPKRP---LLSVPLNLSGVLEDEMYV 254
           + K   L NG+  +V I Y  +   + ++ A +  P      +L+  ++LS VL + + V
Sbjct: 155 TVK-WSLANGEAAKVLITYNSA---VKLLVASLVYPSSKTSFILADIVDLSSVLPEWVRV 210
Query: 255 GFTAATGQL---VESHKILAWSFSN 276
           GF+AATG     +E+H + +WSF++
Sbjct: 211 GFSAATGASGGKIETHDVFSWSFAS 235

>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective Inhibitors Of Jak2 Length = 313

Iteration: 1
 Score = 75.9 bits (185), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 48/185 (25%), Positives = 96/185 (51%), Gaps = 14/185 (7%)
Query: 386 EGGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKRE-KGSLMLVYDYM 444
           +  G  +AVK++ H  +   R F  EI  L  L+H ++V  +G C    + +L L+ +Y+
Sbjct: 54  DNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYL 113
Query: 445 ENGSLDKWIFQCDGSMMLSCEERIRVLK---DVAAGVLYLHEGWEKKVLHRDIKSSNVLL 501
             GSL  ++ +    +     + I++L+    +  G+ YL     K+ +HRD+ + N+L+
Sbjct: 114 PYGSLRDYLQKHKERI-----DHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILV 165
Query: 502 DKEMNGRLGDFGLARMHGHGQVASTTRVVGT--VGYLAPEVFSSGRASTQTDVFGFGILI 559
           + E   ++GDFGL ++    +     +  G   + + APE  +  + S  +DV+ FG+++
Sbjct: 166 ENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVL 225
Query: 560 LEVLS 564
            E+ +
Sbjct: 226 YELFT 230

>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A 2-amino-4- Heteroaryl-pyrimidine Inhibitor Length = 331

Iteration: 1
 Score = 75.9 bits (185), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 62/200 (31%), Positives = 103/200 (51%), Gaps = 26/200 (13%)
Query: 389 GAEIAVKRISHEND--GGTRAFLAEISSLGRLKHKSLVGLRGWCK-------REKGSLML 439
           G ++A+K++  EN+  G     L EI  L  LKH+++V L   C+       R K S+ L
Sbjct: 43  GQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCKASIYL 102
Query: 440 VYDYMEN---GSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKS 496
           V+D+ E+   G L   + +       +  E  RV++ +  G+ Y+H     K+LHRD+K+
Sbjct: 103 VFDFCEHDLAGLLSNVLVK------FTLSEIKRVMQMLLNGLYYIHRN---KILHRDMKA 153
Query: 497 SNVLLDKEMNGRLGDFGLARMHGHGQVASTTRV---VGTVGYLAPEVFSSGRA-STQTDV 552
           +NVL+ ++   +L DFGLAR     + +   R    V T+ Y  PE+    R      D+
Sbjct: 154 ANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPPELLLGERDYGPPIDL 213
Query: 553 FGFGILILEVLSGRRPIEEG 572
           +G G ++ E+ + R PI +G
Sbjct: 214 WGAGCIMAEMWT-RSPIMQG 232

>pdb|2BQP|A Chain A, The Structure Of The Pea Lectin-D-Glucopyranose Complex Length = 234

Iteration: 1
 Score = 75.5 bits (184), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 70/247 (28%), Positives = 103/247 (41%), Gaps = 43/247 (17%)
Query: 37  NLSLYGTATVESRILTLTNSTTFTIGRALYPSKIPTKRPNSSYVYPFSTSFIFAMAPYKG 96
           NL   G        LTLT +   T+GRALY S I      +  V  F TSF F +     
Sbjct: 17  NLIFQGDGYTTKEKLTLTKAVKNTVGRALYSSPIHIWDRETGNVANFVTSFTFVINAPNS 76
Query: 97  VLAGHGLVFLFVPFHGIKGATEAQHLGLFNRTNDGNSSNHVFGVEFDVFKNQEFNDIDEN 156
                G  F   P    K  T   +LG+FN   + + +     VEFD F N  ++  + +
Sbjct: 77  YNVADGFTFFIAPVD-TKPQTGGGYLGVFNSA-EYDKTTQTVAVEFDTFYNAAWDPSNRD 134
Query: 157 -HVGIDVNSLTSVSAHAAGYWPDNQXXXXXXXXXXXXXXXEKSFKELKLNNGKNYQVWID 215
            H+GIDVNS+ SV+                              K  KL NG+   V I 
Sbjct: 135 RHIGIDVNSIKSVNT-----------------------------KSWKLQNGEEANVVIA 165
Query: 216 YADSFINITMVEAGMKRPKRPL--------LSVPLNLSGVLEDEMYVGFTAATGQLVESH 267
           + ++  N+  V   +  P   L        LS  ++L  V+ + + +GF+A TG    +H
Sbjct: 166 F-NAATNVLTV--SLTYPNNSLEEEVTSYTLSDVVSLKDVVPEWVRIGFSATTGAEYAAH 222
Query: 268 KILAWSF 274
           ++L+WSF
Sbjct: 223 EVLSWSF 229

>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With Compound 7 Length = 298

Iteration: 1
 Score = 75.5 bits (184), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 47/185 (25%), Positives = 97/185 (52%), Gaps = 14/185 (7%)
Query: 386 EGGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKRE-KGSLMLVYDYM 444
           +  G  +AVK++ H  +   R F  EI  L  L+H ++V  +G C    + +L L+ +++
Sbjct: 39  DNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEFL 98
Query: 445 ENGSLDKWIFQCDGSMMLSCEERIRVLK---DVAAGVLYLHEGWEKKVLHRDIKSSNVLL 501
             GSL +++ +    +     + I++L+    +  G+ YL     K+ +HRD+ + N+L+
Sbjct: 99  PYGSLREYLQKHKERI-----DHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILV 150
Query: 502 DKEMNGRLGDFGLARMHGHGQVASTTRVVGT--VGYLAPEVFSSGRASTQTDVFGFGILI 559
           + E   ++GDFGL ++    +     +  G   + + APE  +  + S  +DV+ FG+++
Sbjct: 151 ENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVL 210
Query: 560 LEVLS 564
            E+ +
Sbjct: 211 YELFT 215

>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain Length = 299

Iteration: 1
 Score = 75.5 bits (184), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 58/214 (27%), Positives = 112/214 (52%), Gaps = 29/214 (13%)
Query: 392 IAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDK 451
           +AVK +   +D   + F  E   L  L+H+ +V   G C  E   L++V++YM++G L+K
Sbjct: 46  VAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCV-EGDPLIMVFEYMKHGDLNK 104
Query: 452 WIFQ--CDGSMM--------LSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLL 501
           ++     D  +M        L+  + + + + +AAG++YL     +  +HRD+ + N L+
Sbjct: 105 FLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLAS---QHFVHRDLATRNCLV 161
Query: 502 DKEMNGRLGDFGLARMHGHGQVASTT--RVVG----TVGYLAPEVFSSGRASTQTDVFGF 555
            + +  ++GDFG++R      V ST   RV G     + ++ PE     + +T++DV+  
Sbjct: 162 GENLLVKIGDFGMSR-----DVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSL 216
Query: 556 GILILEVLS-GRRPIEEGKPNLVEMVWELMVQGK 588
           G+++ E+ + G++P  +   N    V E + QG+
Sbjct: 217 GVVLWEIFTYGKQPWYQLSNN---EVIECITQGR 247

>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family- Selective Tyrosine Kinase Inhibitor Length = 454

Iteration: 1
 Score = 75.5 bits (184), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 45/163 (27%), Positives = 89/163 (54%), Gaps = 7/163 (4%)
Query: 407 AFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEE 466
           AFLAE + +  L+H  LV L     +E   + ++ ++M  GSL  ++   +GS      +
Sbjct: 229 AFLAEANVMKTLQHDKLVKLHAVVTKE--PIYIITEFMAKGSLLDFLKSDEGSKQ-PLPK 285
Query: 467 RIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVAST 526
            I     +A G+ ++ +   +  +HRD++++N+L+   +  ++ DFGLAR+    +  + 
Sbjct: 286 LIDFSAQIAEGMAFIEQ---RNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAR 342
Query: 527 TRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLS-GRRP 568
                 + + APE  + G  + ++DV+ FGIL++E+++ GR P
Sbjct: 343 EGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIP 385

>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The Phosphate-responsive Signal Transduction Pathway Length = 317

Iteration: 1
 Score = 75.5 bits (184), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 59/185 (31%), Positives = 103/185 (55%), Gaps = 15/185 (8%)
Query: 389 GAEIAVKRISHENDGGTRAF-LAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENG 447
           G  +A+K +  +++ GT +  + EIS +  LKH+++V L      E   L LV+++M+N 
Sbjct: 30  GVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHTE-NKLTLVFEFMDN- 87
Query: 448 SLDKWI-FQCDGSMMLSCEERIRVLK----DVAAGVLYLHEGWEKKVLHRDIKSSNVLLD 502
            L K++  +  G+     E  + ++K     +  G+ + HE    K+LHRD+K  N+L++
Sbjct: 88  DLKKYMDSRTVGNTPRGLE--LNLVKYFQWQLLQGLAFCHEN---KILHRDLKPQNLLIN 142
Query: 503 KEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRA-STQTDVFGFGILILE 561
           K    +LGDFGLAR  G      ++ VV T+ Y AP+V    R  ST  D++  G ++ E
Sbjct: 143 KRGQLKLGDFGLARAFGIPVNTFSSEVV-TLWYRAPDVLMGSRTYSTSIDIWSCGCILAE 201
Query: 562 VLSGR 566
           +++G+
Sbjct: 202 MITGK 206

>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720 Length = 280

Iteration: 1
 Score = 75.5 bits (184), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 54/184 (29%), Positives = 98/184 (53%), Gaps = 19/184 (10%)
Query: 406 RAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCE 465
           +AF  E+  L + +H +++   G+    K  L +V  + E  SL   +   +    +  +
Sbjct: 53  QAFKNEVGVLRKTRHVNILLFMGYST--KPQLAIVTQWCEGSSLYHHLHASETKFEM--K 108
Query: 466 ERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLA----RMHGHG 521
           + I + +  A G+ YLH    K ++HRD+KS+N+ L ++   ++GDFGLA    R  G  
Sbjct: 109 KLIDIARQTARGMDYLHA---KSIIHRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSH 165
Query: 522 QVASTTRVVGTVGYLAPEVF---SSGRASTQTDVFGFGILILEVLSGRRPIE--EGKPNL 576
           Q     ++ G++ ++APEV     S   S Q+DV+ FGI++ E+++G+ P      +  +
Sbjct: 166 QFE---QLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQI 222
Query: 577 VEMV 580
           +EMV
Sbjct: 223 IEMV 226

>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex Length = 292

Iteration: 1
 Score = 75.5 bits (184), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 59/184 (32%), Positives = 94/184 (51%), Gaps = 11/184 (5%)
Query: 392 IAVKRISHEND--GGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSL 449
           +A+KR+  ++D  G   + L EI  L  LKHK++V L      +K  L LV+++ +   L
Sbjct: 30  VALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDK-KLTLVFEFCDQ-DL 87
Query: 450 DKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRL 509
            K+   C+G   L  E     L  +  G+ + H    + VLHRD+K  N+L+++    +L
Sbjct: 88  KKYFDSCNGD--LDPEIVKSFLFQLLKGLGFCHS---RNVLHRDLKPQNLLINRNGELKL 142
Query: 510 GDFGLARMHGHGQVASTTRVVGTVGYLAPEV-FSSGRASTQTDVFGFGILILEVLSGRRP 568
            DFGLAR  G      +  VV T+ Y  P+V F +   ST  D++  G +  E+ +  RP
Sbjct: 143 ADFGLARAFGIPVRCYSAEVV-TLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAARP 201
Query: 569 IEEG 572
           +  G
Sbjct: 202 LFPG 205

>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii Inhibtor Nvp-Bbt594 Length = 295

Iteration: 1
 Score = 75.1 bits (183), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 48/185 (25%), Positives = 96/185 (51%), Gaps = 14/185 (7%)
Query: 386 EGGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKRE-KGSLMLVYDYM 444
           +  G  +AVK++ H  +   R F  EI  L  L+H ++V  +G C    + +L L+ +Y+
Sbjct: 36  DNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYL 95
Query: 445 ENGSLDKWIFQCDGSMMLSCEERIRVLK---DVAAGVLYLHEGWEKKVLHRDIKSSNVLL 501
             GSL  ++ +    +     + I++L+    +  G+ YL     K+ +HRD+ + N+L+
Sbjct: 96  PYGSLRDYLQKHKERI-----DHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILV 147
Query: 502 DKEMNGRLGDFGLARMHGHGQVASTTRVVGT--VGYLAPEVFSSGRASTQTDVFGFGILI 559
           + E   ++GDFGL ++    +     +  G   + + APE  +  + S  +DV+ FG+++
Sbjct: 148 ENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVL 207
Query: 560 LEVLS 564
            E+ +
Sbjct: 208 YELFT 212

>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With Plx3203 Length = 292

Iteration: 1
 Score = 75.1 bits (183), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 54/184 (29%), Positives = 98/184 (53%), Gaps = 19/184 (10%)
Query: 406 RAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCE 465
           +AF  E+  L + +H +++   G+    K  L +V  + E  SL   +   +    +  +
Sbjct: 65  QAFKNEVGVLRKTRHVNILLFMGYST--KPQLAIVTQWCEGSSLYHHLHASETKFEM--K 120
Query: 466 ERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLA----RMHGHG 521
           + I + +  A G+ YLH    K ++HRD+KS+N+ L ++   ++GDFGLA    R  G  
Sbjct: 121 KLIDIARQTARGMDYLHA---KSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSH 177
Query: 522 QVASTTRVVGTVGYLAPEVF---SSGRASTQTDVFGFGILILEVLSGRRPIE--EGKPNL 576
           Q     ++ G++ ++APEV     S   S Q+DV+ FGI++ E+++G+ P      +  +
Sbjct: 178 QFE---QLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQI 234
Query: 577 VEMV 580
           +EMV
Sbjct: 235 IEMV 238

>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510 With Adp Bound Length = 311

Iteration: 1
 Score = 75.1 bits (183), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 59/185 (31%), Positives = 99/185 (53%), Gaps = 13/185 (7%)
Query: 386 EGGGAEIAVKRI--SHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDY 443
           +  G  +A+KRI    E++G     + EIS L  L H ++V L      E+  L LV+++
Sbjct: 42  DSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSER-CLTLVFEF 100
Query: 444 MENGSLDKWIFQCDGSMMLSCEERIRV-LKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLD 502
           ME   L K + +    +    + +I++ L  +  GV + H+    ++LHRD+K  N+L++
Sbjct: 101 MEK-DLKKVLDENKTGLQ---DSQIKIYLYQLLRGVAHCHQ---HRILHRDLKPQNLLIN 153
Query: 503 KEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVF-SSGRASTQTDVFGFGILILE 561
            +   +L DFGLAR  G   V S T  V T+ Y AP+V   S + ST  D++  G +  E
Sbjct: 154 SDGALKLADFGLARAFG-IPVRSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAE 212
Query: 562 VLSGR 566
           +++G+
Sbjct: 213 MITGK 217

>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights Into Receptor Autoregulation Length = 343

Iteration: 1
 Score = 74.7 bits (182), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 50/196 (25%), Positives = 95/196 (48%), Gaps = 27/196 (13%)
Query: 392 IAVKRISHENDGGTRA-FLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLD 450
           +AVK +  E     +A F  E + +    + ++V L G C   K  + L+++YM  G L+
Sbjct: 80  VAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVGK-PMCLLFEYMAYGDLN 138
Query: 451 KWI---------------------FQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKV 489
           +++                         G   LSC E++ + + VAAG+ YL E   +K 
Sbjct: 139 EFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSE---RKF 195
Query: 490 LHRDIKSSNVLLDKEMNGRLGDFGLAR-MHGHGQVASTTRVVGTVGYLAPEVFSSGRAST 548
           +HRD+ + N L+ + M  ++ DFGL+R ++      +       + ++ PE     R +T
Sbjct: 196 VHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTT 255
Query: 549 QTDVFGFGILILEVLS 564
           ++DV+ +G+++ E+ S
Sbjct: 256 ESDVWAYGVVLWEIFS 271

>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510 With Indirubin 3'-Monoxime Bound Length = 313

Iteration: 1
 Score = 74.7 bits (182), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 59/185 (31%), Positives = 99/185 (53%), Gaps = 13/185 (7%)
Query: 386 EGGGAEIAVKRI--SHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDY 443
           +  G  +A+KRI    E++G     + EIS L  L H ++V L      E+  L LV+++
Sbjct: 42  DSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSER-CLTLVFEF 100
Query: 444 MENGSLDKWIFQCDGSMMLSCEERIRV-LKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLD 502
           ME   L K + +    +    + +I++ L  +  GV + H+    ++LHRD+K  N+L++
Sbjct: 101 MEK-DLKKVLDENKTGLQ---DSQIKIYLYQLLRGVAHCHQ---HRILHRDLKPQNLLIN 153
Query: 503 KEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVF-SSGRASTQTDVFGFGILILE 561
            +   +L DFGLAR  G   V S T  V T+ Y AP+V   S + ST  D++  G +  E
Sbjct: 154 SDGALKLADFGLARAFG-IPVRSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAE 212
Query: 562 VLSGR 566
           +++G+
Sbjct: 213 MITGK 217

>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With Ind E804 Length = 324

Iteration: 1
 Score = 74.7 bits (182), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 58/178 (32%), Positives = 93/178 (52%), Gaps = 12/178 (6%)
Query: 392 IAVK--RISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSL 449
           +A+K  R+ HE +G     + E+S L  LKH ++V L      EK SL LV++Y++   L
Sbjct: 30  VALKEIRLEHE-EGAPCTAIREVSLLKDLKHANIVTLHDIIHTEK-SLTLVFEYLDK-DL 86
Query: 450 DKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRL 509
            +++  C    +++       L  +  G+ Y H    +KVLHRD+K  N+L+++    +L
Sbjct: 87  KQYLDDCGN--IINMHNVKLFLFQLLRGLAYCHR---QKVLHRDLKPQNLLINERGELKL 141
Query: 510 GDFGLARMHGHGQVASTTRVVGTVGYLAPEV-FSSGRASTQTDVFGFGILILEVLSGR 566
            DFGLAR            VV T+ Y  P++   S   STQ D++G G +  E+ +GR
Sbjct: 142 ADFGLARAKSIPTKTYDNEVV-TLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGR 198

>pdb|2SBA|A Chain A, Soybean Agglutinin Complexed With 2,6-Pentasaccharide Length = 253

Iteration: 1
 Score = 74.3 bits (181), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 76/242 (31%), Positives = 108/242 (44%), Gaps = 45/242 (18%)
Query: 60  TIGRALYPSKIPTKRPNSSYVYPFSTSFIFAM-APYKGVLAGHGLVFLFVPFHGIKGATE 118
           ++GRALY + I      +  V  F+ SF F   AP    LA  GL F   P    K  T 
Sbjct: 47  SLGRALYSTPIHIWDKETGSVASFAASFNFTFYAPDTKRLAD-GLAFFLAPI-DTKPQTH 104
Query: 119 AQHLGLFNRTNDGNSSNHVFGVEFDVFKNQEFNDIDENHVGIDVNSLTSVSAHAAGYWPD 178
           A +LGLFN    G+    V  VEFD F+N    D    H+GI+VNS+ S+   +   W  
Sbjct: 105 AGYLGLFNENESGD---QVVAVEFDTFRNSW--DPPNPHIGINVNSIRSIKTTS---W-- 154
Query: 179 NQXXXXXXXXXXXXXXXEKSFKELKLNNGKNYQVWIDYADSFINITMVEAGMKRPKR--- 235
                                    L N K  +V I Y  S    +++ A +  P +   
Sbjct: 155 ------------------------DLANNKVAKVLITYDAS---TSLLVASLVYPSQRTS 187
Query: 236 PLLSVPLNLSGVLEDEMYVGFTAATGQLV--ESHKILAWSFSNTKFSLSEELITSGLPSF 293
            +LS  ++L   L + + +GF+AATG  +  ESH +L+WSF++     S  +    L SF
Sbjct: 188 NILSDVVDLKTSLPEWVRIGFSAATGLDIPGESHDVLSWSFASNLPHASSNIDPLDLTSF 247
Query: 294 VL 295
           VL
Sbjct: 248 VL 249

>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase Length = 453

Iteration: 1
 Score = 74.3 bits (181), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 67/254 (26%), Positives = 114/254 (44%), Gaps = 28/254 (11%)
Query: 388 GGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENG 447
           G   +A+K +   N     AFL E   + +L+H+ LV L      E   + +V +YM  G
Sbjct: 208 GTTRVAIKTLKPGN-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE--PIYIVTEYMSKG 264
Query: 448 SLDKWIFQCDGSM--MLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEM 505
           SL  ++    G M   L   + + +   +A+G+ Y+        +HRD++++N+L+ + +
Sbjct: 265 SLLDFL---KGEMGKYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLRAANILVGENL 318
Query: 506 NGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLS- 564
             ++ DFGL R+    +  +       + + APE    GR + ++DV+ FGIL+ E+ + 
Sbjct: 319 VCKVADFGLGRLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTK 378
Query: 565 GRRPIEEGKPNLVEMVWELMVQGKXXXXXXXXXXXKGGFDEDEVERVLH-LGLLCAYPDP 623
           GR P     P +V    E++ Q +                  E    LH L   C   DP
Sbjct: 379 GRVPY----PGMVNR--EVLDQVERGYRMPC---------PPECPESLHDLMCQCWRKDP 423
Query: 624 RARPTMRQVVKVLE 637
             RPT   +   LE
Sbjct: 424 EERPTFEYLQAFLE 437

>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2 Chain) Length = 276

Iteration: 1
 Score = 74.3 bits (181), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 55/173 (31%), Positives = 85/173 (49%), Gaps = 13/173 (7%)
Query: 411 EISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRV 470
           EI +L   +H  ++ L           M V +Y+  G L  +I  C    +   E R R+
Sbjct: 61  EIQNLKLFRHPHIIKLYQVISTPTDFFM-VMEYVSGGELFDYI--CKHGRVEEMEAR-RL 116
Query: 471 LKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRVV 530
            + + + V Y H      V+HRD+K  NVLLD  MN ++ DFGL+ M   G+   T+   
Sbjct: 117 FQQILSAVDYCHR---HMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTS--C 171
Query: 531 GTVGYLAPEVFSSGR--ASTQTDVFGFGILILEVLSGRRPI-EEGKPNLVEMV 580
           G+  Y APEV  SGR  A  + D++  G+++  +L G  P  +E  P L + +
Sbjct: 172 GSPNYAAPEVI-SGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKI 223

>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 293

Iteration: 1
 Score = 73.9 bits (180), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 63/260 (24%), Positives = 120/260 (46%), Gaps = 22/260 (8%)
Query: 392 IAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDK 451
           +AVK +  E+      FL E + +  +KH +LV L G C RE     ++ ++M  G+L  
Sbjct: 39  VAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREP-PFYIITEFMTYGNLLD 96
Query: 452 WIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGD 511
           ++ +C+    +S    + +   +++ + YL +   K  +HRD+ + N L+ +    ++ D
Sbjct: 97  YLRECN-RQEVSAVVLLYMATQISSAMEYLEK---KNFIHRDLAARNCLVGENHLVKVAD 152
Query: 512 FGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLS-GRRPIE 570
           FGL+R+       +       + + APE  +  + S ++DV+ FG+L+ E+ + G  P  
Sbjct: 153 FGLSRLMTGDTFTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYP 212
Query: 571 EGKPNLVEMVWELMVQGKXXXXXXXXXXXKGGFDEDEVERVLHLGLLCAYPDPRARPTMR 630
              P+    V+EL+ +                  E   E+V  L   C   +P  RP+  
Sbjct: 213 GIDPS---QVYELLEKDYRMER-----------PEGCPEKVYELMRACWQWNPSDRPSFA 258
Query: 631 QVVKVLEGKI-EAGIENETE 649
           ++ +  E    E+ I +E E
Sbjct: 259 EIHQAFETMFQESSISDEVE 278

>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed With A Specific Inhibitor Of Human P38 Map Kinase Length = 380

Iteration: 1
 Score = 73.9 bits (180), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 55/188 (29%), Positives = 94/188 (50%), Gaps = 9/188 (4%)
Query: 390 AEIAVKRIS-HENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGS 448
             +A+K+IS  E+    +  L EI  L R +H++++G+    +      M    Y+    
Sbjct: 69  VRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDV-YLVTHL 127
Query: 449 LDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGR 508
           +   +++   +  LS +     L  +  G+ Y+H      VLHRD+K SN+LL+   + +
Sbjct: 128 MGADLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTXDLK 184
Query: 509 LGDFGLARMH--GHGQVASTTRVVGTVGYLAPEVFSSGRASTQT-DVFGFGILILEVLSG 565
           + DFGLAR+    H      T  V T  Y APE+  + +  T++ D++  G ++ E+LS 
Sbjct: 185 ICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN 244
Query: 566 RRPIEEGK 573
            RPI  GK
Sbjct: 245 -RPIFPGK 251

>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 293

Iteration: 1
 Score = 73.9 bits (180), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 63/260 (24%), Positives = 120/260 (46%), Gaps = 22/260 (8%)
Query: 392 IAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDK 451
           +AVK +  E+      FL E + +  +KH +LV L G C RE     ++ ++M  G+L  
Sbjct: 39  VAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREP-PFYIITEFMTYGNLLD 96
Query: 452 WIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGD 511
           ++ +C+    +S    + +   +++ + YL +   K  +HRD+ + N L+ +    ++ D
Sbjct: 97  YLRECN-RQEVSAVVLLYMATQISSAMEYLEK---KNFIHRDLAARNCLVGENHLVKVAD 152
Query: 512 FGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLS-GRRPIE 570
           FGL+R+       +       + + APE  +  + S ++DV+ FG+L+ E+ + G  P  
Sbjct: 153 FGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYP 212
Query: 571 EGKPNLVEMVWELMVQGKXXXXXXXXXXXKGGFDEDEVERVLHLGLLCAYPDPRARPTMR 630
              P+    V+EL+ +                  E   E+V  L   C   +P  RP+  
Sbjct: 213 GIDPS---QVYELLEKDYRMER-----------PEGCPEKVYELMRACWQWNPSDRPSFA 258
Query: 631 QVVKVLEGKI-EAGIENETE 649
           ++ +  E    E+ I +E E
Sbjct: 259 EIHQAFETMFQESSISDEVE 278

>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2 Length = 298

Iteration: 1
 Score = 73.9 bits (180), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 47/185 (25%), Positives = 96/185 (51%), Gaps = 14/185 (7%)
Query: 386 EGGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKRE-KGSLMLVYDYM 444
           +  G  +AVK++ H  +   R F  EI  L  L+H ++V  +G C    + +L L+ +Y+
Sbjct: 37  DNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYL 96
Query: 445 ENGSLDKWIFQCDGSMMLSCEERIRVLK---DVAAGVLYLHEGWEKKVLHRDIKSSNVLL 501
             GSL  ++ +    +     + I++L+    +  G+ YL     K+ +HR++ + N+L+
Sbjct: 97  PYGSLRDYLQKHKERI-----DHIKLLQYTSQICKGMEYL---GTKRYIHRNLATRNILV 148
Query: 502 DKEMNGRLGDFGLARMHGHGQVASTTRVVGT--VGYLAPEVFSSGRASTQTDVFGFGILI 559
           + E   ++GDFGL ++    +     +  G   + + APE  +  + S  +DV+ FG+++
Sbjct: 149 ENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVL 208
Query: 560 LEVLS 564
            E+ +
Sbjct: 209 YELFT 213

>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451 Length = 279

Iteration: 1
 Score = 73.9 bits (180), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 49/182 (26%), Positives = 93/182 (51%), Gaps = 8/182 (4%)
Query: 388 GGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENG 447
           G   +A+K +         AFL E   + +L+H+ LV L      E   + +V +YM  G
Sbjct: 34  GTTRVAIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE--PIYIVTEYMSKG 90
Query: 448 SLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNG 507
           SL  ++ + +    L   + + +   +A+G+ Y+        +HRD++++N+L+ + +  
Sbjct: 91  SLLDFL-KGETGKYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLRAANILVGENLVC 146
Query: 508 RLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLS-GR 566
           ++ DFGLAR+    +  +       + + APE    GR + ++DV+ FGIL+ E+ + GR
Sbjct: 147 KVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGR 206
Query: 567 RP 568
            P
Sbjct: 207 VP 208

>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 277

Iteration: 1
 Score = 73.9 bits (180), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 51/184 (27%), Positives = 93/184 (50%), Gaps = 12/184 (6%)
Query: 388 GGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENG 447
           G   +A+K +         AFL E   + +L+H+ LV L      E   + +V +YM  G
Sbjct: 32  GTTRVAIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE--PIYIVTEYMSKG 88
Query: 448 SLDKWIFQCDGSM--MLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEM 505
           SL  ++    G M   L   + + +   +A+G+ Y+        +HRD++++N+L+ + +
Sbjct: 89  SLLDFL---KGEMGKYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLRAANILVGENL 142
Query: 506 NGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLS- 564
             ++ DFGLAR+    +  +       + + APE    GR + ++DV+ FGIL+ E+ + 
Sbjct: 143 VCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTK 202
Query: 565 GRRP 568
           GR P
Sbjct: 203 GRVP 206

>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533) Length = 276

Iteration: 1
 Score = 73.9 bits (180), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 49/182 (26%), Positives = 93/182 (51%), Gaps = 8/182 (4%)
Query: 388 GGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENG 447
           G   +A+K +         AFL E   + +L+H+ LV L      E   + +V +YM  G
Sbjct: 31  GTTRVAIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE--PIXIVTEYMSKG 87
Query: 448 SLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNG 507
           SL  ++ + +    L   + + +   +A+G+ Y+        +HRD++++N+L+ + +  
Sbjct: 88  SLLDFL-KGETGKYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLRAANILVGENLVC 143
Query: 508 RLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLS-GR 566
           ++ DFGLAR+    +  +       + + APE    GR + ++DV+ FGIL+ E+ + GR
Sbjct: 144 KVADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGR 203
Query: 567 RP 568
            P
Sbjct: 204 VP 205

>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor Mc4b Length = 275

Iteration: 1
 Score = 73.9 bits (180), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 51/184 (27%), Positives = 93/184 (50%), Gaps = 12/184 (6%)
Query: 388 GGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENG 447
           G   +A+K +         AFL E   + +L+H+ LV L      E   + +V +YM  G
Sbjct: 30  GTTRVAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE--PIYIVTEYMSKG 86
Query: 448 SLDKWIFQCDGSM--MLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEM 505
           SL  ++    G M   L   + + +   +A+G+ Y+        +HRD++++N+L+ + +
Sbjct: 87  SLLDFL---KGEMGKYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLRAANILVGENL 140
Query: 506 NGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLS- 564
             ++ DFGLAR+    +  +       + + APE    GR + ++DV+ FGIL+ E+ + 
Sbjct: 141 VCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTK 200
Query: 565 GRRP 568
           GR P
Sbjct: 201 GRVP 204

>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human Pdk1 Complex 2 Length = 311

Iteration: 1
 Score = 73.9 bits (180), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 48/168 (28%), Positives = 86/168 (51%), Gaps = 8/168 (4%)
Query: 411 EISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRV 470
           E   + RL H   V L  +  ++   L     Y +NG L K+I +  GS   +C      
Sbjct: 82  ERDVMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGCLLKYIRKI-GSFDETCTRFYTA 139
Query: 471 LKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLAR-MHGHGQVASTTRV 529
             ++ + + YLH    K ++HRD+K  N+LL+++M+ ++ DFG A+ +    + A     
Sbjct: 140 --EIVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSF 194
Query: 530 VGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLV 577
           VGT  Y++PE+ +   AS  +D++  G +I ++++G  P   G   L+
Sbjct: 195 VGTAQYVSPELLTEKSASKSSDLWALGCIIYQLVAGLPPFRAGNEYLI 242

>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation Length = 286

Iteration: 1
 Score = 73.9 bits (180), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 51/184 (27%), Positives = 93/184 (50%), Gaps = 12/184 (6%)
Query: 388 GGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENG 447
           G   +A+K +         AFL E   + +L+H+ LV L      E   + +V +YM  G
Sbjct: 41  GTTRVAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE--PIYIVIEYMSKG 97
Query: 448 SLDKWIFQCDGSM--MLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEM 505
           SL  ++    G M   L   + + +   +A+G+ Y+        +HRD++++N+L+ + +
Sbjct: 98  SLLDFL---KGEMGKYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLRAANILVGENL 151
Query: 506 NGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLS- 564
             ++ DFGLAR+    +  +       + + APE    GR + ++DV+ FGIL+ E+ + 
Sbjct: 152 VCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTK 211
Query: 565 GRRP 568
           GR P
Sbjct: 212 GRVP 215

>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs Length = 286

Iteration: 1
 Score = 73.9 bits (180), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 51/184 (27%), Positives = 93/184 (50%), Gaps = 12/184 (6%)
Query: 388 GGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENG 447
           G   +A+K +         AFL E   + +L+H+ LV L      E   + +V +YM  G
Sbjct: 41  GTTRVAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE--PIYIVIEYMSKG 97
Query: 448 SLDKWIFQCDGSM--MLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEM 505
           SL  ++    G M   L   + + +   +A+G+ Y+        +HRD++++N+L+ + +
Sbjct: 98  SLLDFL---KGEMGKYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLRAANILVGENL 151
Query: 506 NGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLS- 564
             ++ DFGLAR+    +  +       + + APE    GR + ++DV+ FGIL+ E+ + 
Sbjct: 152 VCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTK 211
Query: 565 GRRP 568
           GR P
Sbjct: 212 GRVP 215

>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An Inhibitor Length = 452

Iteration: 1
 Score = 73.6 bits (179), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 49/182 (26%), Positives = 93/182 (51%), Gaps = 8/182 (4%)
Query: 388 GGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENG 447
           G   +A+K +         AFL E   + +L+H+ LV L      E   + +V +YM  G
Sbjct: 207 GTTRVAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE--PIYIVTEYMSKG 263
Query: 448 SLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNG 507
           SL  ++ + +    L   + + +   +A+G+ Y+        +HRD++++N+L+ + +  
Sbjct: 264 SLLDFL-KGETGKYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLRAANILVGENLVC 319
Query: 508 RLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLS-GR 566
           ++ DFGLAR+    +  +       + + APE    GR + ++DV+ FGIL+ E+ + GR
Sbjct: 320 KVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGR 379
Query: 567 RP 568
            P
Sbjct: 380 VP 381

>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src Length = 452

Iteration: 1
 Score = 73.6 bits (179), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 49/182 (26%), Positives = 93/182 (51%), Gaps = 8/182 (4%)
Query: 388 GGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENG 447
           G   +A+K +         AFL E   + +L+H+ LV L      E   + +V +YM  G
Sbjct: 207 GTTRVAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE--PIYIVTEYMSKG 263
Query: 448 SLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNG 507
           SL  ++ + +    L   + + +   +A+G+ Y+        +HRD++++N+L+ + +  
Sbjct: 264 SLLDFL-KGETGKYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLRAANILVGENLVC 319
Query: 508 RLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLS-GR 566
           ++ DFGLAR+    +  +       + + APE    GR + ++DV+ FGIL+ E+ + GR
Sbjct: 320 KVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGR 379
Query: 567 RP 568
            P
Sbjct: 380 VP 381

>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound With A Dfg- Out Inhibitor Ap24589 Length = 284

Iteration: 1
 Score = 73.6 bits (179), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 63/261 (24%), Positives = 122/261 (46%), Gaps = 24/261 (9%)
Query: 392 IAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDK 451
           +AVK +  E+      FL E + +  +KH +LV L G C RE     ++ ++M  G+L  
Sbjct: 41  VAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREP-PFYIIIEFMTYGNLLD 98
Query: 452 WIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGD 511
           ++ +C+    +S    + +   +++ + YL +   K  +HRD+ + N L+ +    ++ D
Sbjct: 99  YLRECN-RQEVSAVVLLYMATQISSAMEYLEK---KNFIHRDLAARNCLVGENHLVKVAD 154
Query: 512 FGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLS-GRRPIE 570
           FGL+R+       +       + + APE  +  + S ++DV+ FG+L+ E+ + G  P  
Sbjct: 155 FGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY- 213
Query: 571 EGKPNL-VEMVWELMVQGKXXXXXXXXXXXKGGFDEDEVERVLHLGLLCAYPDPRARPTM 629
              P + +  V+EL+ +             +    E   E+V  L   C   +P  RP+ 
Sbjct: 214 ---PGIDLSQVYELLEKD-----------YRMERPEGCPEKVYELMRACWQWNPSDRPSF 259
Query: 630 RQVVKVLEGKI-EAGIENETE 649
            ++ +  E    E+ I +E E
Sbjct: 260 AEIHQAFETMFQESSISDEVE 280

>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A Dfg-Out Inhibitor Ap24534 Length = 284

Iteration: 1
 Score = 73.6 bits (179), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 63/261 (24%), Positives = 122/261 (46%), Gaps = 24/261 (9%)
Query: 392 IAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDK 451
           +AVK +  E+      FL E + +  +KH +LV L G C RE     ++ ++M  G+L  
Sbjct: 41  VAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREP-PFYIITEFMTYGNLLD 98
Query: 452 WIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGD 511
           ++ +C+    +S    + +   +++ + YL +   K  +HRD+ + N L+ +    ++ D
Sbjct: 99  YLRECN-RQEVSAVVLLYMATQISSAMEYLEK---KNFIHRDLAARNCLVGENHLVKVAD 154
Query: 512 FGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLS-GRRPIE 570
           FGL+R+       +       + + APE  +  + S ++DV+ FG+L+ E+ + G  P  
Sbjct: 155 FGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY- 213
Query: 571 EGKPNL-VEMVWELMVQGKXXXXXXXXXXXKGGFDEDEVERVLHLGLLCAYPDPRARPTM 629
              P + +  V+EL+ +             +    E   E+V  L   C   +P  RP+ 
Sbjct: 214 ---PGIDLSQVYELLEKD-----------YRMERPEGCPEKVYELMRACWQWNPSDRPSF 259
Query: 630 RQVVKVLEGKI-EAGIENETE 649
            ++ +  E    E+ I +E E
Sbjct: 260 AEIHQAFETMFQESSISDEVE 280

>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To Vinylsulfonamide- Pyrazolopyrimidine 9 Length = 286

Iteration: 1
 Score = 73.6 bits (179), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 51/184 (27%), Positives = 93/184 (50%), Gaps = 12/184 (6%)
Query: 388 GGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENG 447
           G   +A+K +         AFL E   + +L+H+ LV L      E   + +V +YM  G
Sbjct: 41  GTTRVAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE--PIYIVCEYMSKG 97
Query: 448 SLDKWIFQCDGSM--MLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEM 505
           SL  ++    G M   L   + + +   +A+G+ Y+        +HRD++++N+L+ + +
Sbjct: 98  SLLDFL---KGEMGKYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLRAANILVGENL 151
Query: 506 NGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLS- 564
             ++ DFGLAR+    +  +       + + APE    GR + ++DV+ FGIL+ E+ + 
Sbjct: 152 VCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTK 211
Query: 565 GRRP 568
           GR P
Sbjct: 212 GRVP 215

>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With Plx4032 Length = 289

Iteration: 1
 Score = 73.6 bits (179), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 53/184 (28%), Positives = 98/184 (53%), Gaps = 19/184 (10%)
Query: 406 RAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCE 465
           +AF  E+  L + +H +++   G+    +  L +V  + E  SL   +   +    +  +
Sbjct: 65  QAFKNEVGVLRKTRHVNILLFMGYSTAPQ--LAIVTQWCEGSSLYHHLHASETKFEM--K 120
Query: 466 ERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLA----RMHGHG 521
           + I + +  A G+ YLH    K ++HRD+KS+N+ L ++   ++GDFGLA    R  G  
Sbjct: 121 KLIDIARQTARGMDYLHA---KSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSH 177
Query: 522 QVASTTRVVGTVGYLAPEVF---SSGRASTQTDVFGFGILILEVLSGRRPIE--EGKPNL 576
           Q     ++ G++ ++APEV     S   S Q+DV+ FGI++ E+++G+ P      +  +
Sbjct: 178 QFE---QLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQI 234
Query: 577 VEMV 580
           +EMV
Sbjct: 235 IEMV 238

>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In Complex With The Cancer Drug Imatinib. Length = 286

Iteration: 1
 Score = 73.6 bits (179), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 51/184 (27%), Positives = 93/184 (50%), Gaps = 12/184 (6%)
Query: 388 GGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENG 447
           G   +A+K +         AFL E   + +L+H+ LV L      E   + +V +YM  G
Sbjct: 41  GTTRVAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE--PIYIVTEYMSKG 97
Query: 448 SLDKWIFQCDGSM--MLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEM 505
           SL  ++    G M   L   + + +   +A+G+ Y+        +HRD++++N+L+ + +
Sbjct: 98  SLLDFL---KGEMGKYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLRAANILVGENL 151
Query: 506 NGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLS- 564
             ++ DFGLAR+    +  +       + + APE    GR + ++DV+ FGIL+ E+ + 
Sbjct: 152 VCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTK 211
Query: 565 GRRP 568
           GR P
Sbjct: 212 GRVP 215

>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound With Ppy-A Length = 288

Iteration: 1
 Score = 73.2 bits (178), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 63/261 (24%), Positives = 122/261 (46%), Gaps = 24/261 (9%)
Query: 392 IAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDK 451
           +AVK +  E+      FL E + +  +KH +LV L G C RE     ++ ++M  G+L  
Sbjct: 41  VAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREP-PFYIIIEFMTYGNLLD 98
Query: 452 WIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGD 511
           ++ +C+    +S    + +   +++ + YL +   K  +HRD+ + N L+ +    ++ D
Sbjct: 99  YLRECN-RQEVSAVVLLYMATQISSAMEYLEK---KNFIHRDLAARNCLVGENHLVKVAD 154
Query: 512 FGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLS-GRRPIE 570
           FGL+R+       +       + + APE  +  + S ++DV+ FG+L+ E+ + G  P  
Sbjct: 155 FGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY- 213
Query: 571 EGKPNL-VEMVWELMVQGKXXXXXXXXXXXKGGFDEDEVERVLHLGLLCAYPDPRARPTM 629
              P + +  V+EL+ +             +    E   E+V  L   C   +P  RP+ 
Sbjct: 214 ---PGIDLSQVYELLEKD-----------YRMERPEGCPEKVYELMRACWQWNPSDRPSF 259
Query: 630 RQVVKVLEGKI-EAGIENETE 649
            ++ +  E    E+ I +E E
Sbjct: 260 AEIHQAFETMFQESSISDEVE 280

>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With Cgp77675 Length = 283

Iteration: 1
 Score = 73.2 bits (178), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 49/182 (26%), Positives = 93/182 (51%), Gaps = 8/182 (4%)
Query: 388 GGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENG 447
           G   +A+K +         AFL E   + +L+H+ LV L      E   + +V +YM  G
Sbjct: 38  GTTRVAIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE--PIYIVTEYMNKG 94
Query: 448 SLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNG 507
           SL  ++ + +    L   + + +   +A+G+ Y+        +HRD++++N+L+ + +  
Sbjct: 95  SLLDFL-KGETGKYLRLPQLVDMSAQIASGMAYVER---MNYVHRDLRAANILVGENLVC 150
Query: 508 RLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLS-GR 566
           ++ DFGLAR+    +  +       + + APE    GR + ++DV+ FGIL+ E+ + GR
Sbjct: 151 KVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGR 210
Query: 567 RP 568
            P
Sbjct: 211 VP 212

>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a Length = 288

Iteration: 1
 Score = 73.2 bits (178), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 63/261 (24%), Positives = 122/261 (46%), Gaps = 24/261 (9%)
Query: 392 IAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDK 451
           +AVK +  E+      FL E + +  +KH +LV L G C RE     ++ ++M  G+L  
Sbjct: 41  VAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREP-PFYIITEFMTYGNLLD 98
Query: 452 WIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGD 511
           ++ +C+    +S    + +   +++ + YL +   K  +HRD+ + N L+ +    ++ D
Sbjct: 99  YLRECN-RQEVSAVVLLYMATQISSAMEYLEK---KNFIHRDLAARNCLVGENHLVKVAD 154
Query: 512 FGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLS-GRRPIE 570
           FGL+R+       +       + + APE  +  + S ++DV+ FG+L+ E+ + G  P  
Sbjct: 155 FGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY- 213
Query: 571 EGKPNL-VEMVWELMVQGKXXXXXXXXXXXKGGFDEDEVERVLHLGLLCAYPDPRARPTM 629
              P + +  V+EL+ +             +    E   E+V  L   C   +P  RP+ 
Sbjct: 214 ---PGIDLSQVYELLEKD-----------YRMERPEGCPEKVYELMRACWQWNPSDRPSF 259
Query: 630 RQVVKVLEGKI-EAGIENETE 649
            ++ +  E    E+ I +E E
Sbjct: 260 AEIHQAFETMFQESSISDEVE 280

>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A Small Molecule Inhibitor Length = 293

Iteration: 1
 Score = 73.2 bits (178), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 63/261 (24%), Positives = 122/261 (46%), Gaps = 24/261 (9%)
Query: 392 IAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDK 451
           +AVK +  E+      FL E + +  +KH +LV L G C RE     ++ ++M  G+L  
Sbjct: 46  VAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREP-PFYIITEFMTYGNLLD 103
Query: 452 WIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGD 511
           ++ +C+    +S    + +   +++ + YL +   K  +HRD+ + N L+ +    ++ D
Sbjct: 104 YLRECN-RQEVSAVVLLYMATQISSAMEYLEK---KNFIHRDLAARNCLVGENHLVKVAD 159
Query: 512 FGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLS-GRRPIE 570
           FGL+R+       +       + + APE  +  + S ++DV+ FG+L+ E+ + G  P  
Sbjct: 160 FGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY- 218
Query: 571 EGKPNL-VEMVWELMVQGKXXXXXXXXXXXKGGFDEDEVERVLHLGLLCAYPDPRARPTM 629
              P + +  V+EL+ +             +    E   E+V  L   C   +P  RP+ 
Sbjct: 219 ---PGIDLSQVYELLEKD-----------YRMERPEGCPEKVYELMRACWQWNPSDRPSF 264
Query: 630 RQVVKVLEGKI-EAGIENETE 649
            ++ +  E    E+ I +E E
Sbjct: 265 AEIHQAFETMFQESSISDEVE 285

>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor Length = 535

Iteration: 1
 Score = 73.2 bits (178), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 46/163 (28%), Positives = 87/163 (53%), Gaps = 7/163 (4%)
Query: 407 AFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEE 466
           AFL E   + +L+H+ LV L      E   + +V +YM  GSL  ++ + +    L   +
Sbjct: 308 AFLQEAQVMKKLRHEKLVQLYAVVSEE--PIYIVTEYMSKGSLLDFL-KGETGKYLRLPQ 364
Query: 467 RIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVAST 526
            + +   +A+G+ Y+        +HRD++++N+L+ + +  ++ DFGLAR+    +  + 
Sbjct: 365 LVDMAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTAR 421
Query: 527 TRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLS-GRRP 568
                 + + APE    GR + ++DV+ FGIL+ E+ + GR P
Sbjct: 422 QGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP 464

>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 277

Iteration: 1
 Score = 73.2 bits (178), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 62/258 (24%), Positives = 119/258 (46%), Gaps = 22/258 (8%)
Query: 392 IAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDK 451
           +AVK +  E+      FL E + +  +KH +LV L G C RE     ++ ++M  G+L  
Sbjct: 39  VAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREP-PFYIIIEFMTYGNLLD 96
Query: 452 WIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGD 511
           ++ +C+    +S    + +   +++ + YL +   K  +HRD+ + N L+ +    ++ D
Sbjct: 97  YLRECN-RQEVSAVVLLYMATQISSAMEYLEK---KNFIHRDLAARNCLVGENHLVKVAD 152
Query: 512 FGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLS-GRRPIE 570
           FGL+R+       +       + + APE  +  + S ++DV+ FG+L+ E+ + G  P  
Sbjct: 153 FGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYP 212
Query: 571 EGKPNLVEMVWELMVQGKXXXXXXXXXXXKGGFDEDEVERVLHLGLLCAYPDPRARPTMR 630
              P+    V+EL+ +                  E   E+V  L   C   +P  RP+  
Sbjct: 213 GIDPS---QVYELLEKDYRMER-----------PEGCPEKVYELMRACWQWNPSDRPSFA 258
Query: 631 QVVKVLEGKI-EAGIENE 647
           ++ +  E    E+ I +E
Sbjct: 259 EIHQAFETMFQESSISDE 276

>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant Abl Mutant In Complex With The Aurora Kinase Inhibitor Vx-680 Length = 287

Iteration: 1
 Score = 73.2 bits (178), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 67/262 (25%), Positives = 120/262 (45%), Gaps = 26/262 (9%)
Query: 392 IAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDK 451
           +AVK +  E+      FL E + +  +KH +LV L G C RE     ++ ++M  G+L  
Sbjct: 42  VAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREP-PFYIITEFMTYGNLLD 99
Query: 452 WIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKK-VLHRDIKSSNVLLDKEMNGRLG 510
           ++ +C+       E    VL  +A  +    E  EKK  +HRD+ + N L+ +    ++ 
Sbjct: 100 YLRECNRQ-----EVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVA 154
Query: 511 DFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLS-GRRPI 569
           DFGL+R+       +       + + APE  +  + S ++DV+ FG+L+ E+ + G  P 
Sbjct: 155 DFGLSRLMTGDTYTAPAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 214
Query: 570 EEGKPNL-VEMVWELMVQGKXXXXXXXXXXXKGGFDEDEVERVLHLGLLCAYPDPRARPT 628
               P + +  V+EL+ +             +    E   E+V  L   C   +P  RP+
Sbjct: 215 ----PGIDLSQVYELLEKD-----------YRMERPEGCPEKVYELMRACWQWNPSDRPS 259
Query: 629 MRQVVKVLEGKI-EAGIENETE 649
             ++ +  E    E+ I +E E
Sbjct: 260 FAEIHQAFETMFQESSISDEVE 281

>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase Domain Length = 287

Iteration: 1
 Score = 73.2 bits (178), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 67/262 (25%), Positives = 120/262 (45%), Gaps = 26/262 (9%)
Query: 392 IAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDK 451
           +AVK +  E+      FL E + +  +KH +LV L G C RE     ++ ++M  G+L  
Sbjct: 43  VAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREP-PFYIITEFMTYGNLLD 100
Query: 452 WIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKK-VLHRDIKSSNVLLDKEMNGRLG 510
           ++ +C+       E    VL  +A  +    E  EKK  +HRD+ + N L+ +    ++ 
Sbjct: 101 YLRECNRQ-----EVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVA 155
Query: 511 DFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLS-GRRPI 569
           DFGL+R+       +       + + APE  +  + S ++DV+ FG+L+ E+ + G  P 
Sbjct: 156 DFGLSRLMTGDTYTAPAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 215
Query: 570 EEGKPNL-VEMVWELMVQGKXXXXXXXXXXXKGGFDEDEVERVLHLGLLCAYPDPRARPT 628
               P + +  V+EL+ +             +    E   E+V  L   C   +P  RP+
Sbjct: 216 ----PGIDLSQVYELLEKD-----------YRMERPEGCPEKVYELMRACWQWNPSDRPS 260
Query: 629 MRQVVKVLEGKI-EAGIENETE 649
             ++ +  E    E+ I +E E
Sbjct: 261 FAEIHQAFETMFQESSISDEVE 282

>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable, Small-Molecule C- Abl Kinase Activator That Binds To The Myristoyl Binding Site Length = 298

Iteration: 1
 Score = 72.8 bits (177), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 67/262 (25%), Positives = 120/262 (45%), Gaps = 26/262 (9%)
Query: 392 IAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDK 451
           +AVK +  E+      FL E + +  +KH +LV L G C RE     ++ ++M  G+L  
Sbjct: 54  VAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREP-PFYIITEFMTYGNLLD 111
Query: 452 WIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKK-VLHRDIKSSNVLLDKEMNGRLG 510
           ++ +C+       E    VL  +A  +    E  EKK  +HRD+ + N L+ +    ++ 
Sbjct: 112 YLRECNRQ-----EVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVA 166
Query: 511 DFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLS-GRRPI 569
           DFGL+R+       +       + + APE  +  + S ++DV+ FG+L+ E+ + G  P 
Sbjct: 167 DFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 226
Query: 570 EEGKPNL-VEMVWELMVQGKXXXXXXXXXXXKGGFDEDEVERVLHLGLLCAYPDPRARPT 628
               P + +  V+EL+ +             +    E   E+V  L   C   +P  RP+
Sbjct: 227 ----PGIDLSQVYELLEKD-----------YRMERPEGCPEKVYELMRACWQWNPSDRPS 271
Query: 629 MRQVVKVLEGKI-EAGIENETE 649
             ++ +  E    E+ I +E E
Sbjct: 272 FAEIHQAFETMFQESSISDEVE 293

>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly Mutant) In Complex With N6-Benzyl Adp Length = 452

Iteration: 1
 Score = 72.8 bits (177), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 49/182 (26%), Positives = 93/182 (51%), Gaps = 8/182 (4%)
Query: 388 GGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENG 447
           G   +A+K +         AFL E   + +L+H+ LV L      E   + +V +YM  G
Sbjct: 207 GTTRVAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE--PIYIVGEYMSKG 263
Query: 448 SLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNG 507
           SL  ++ + +    L   + + +   +A+G+ Y+        +HRD++++N+L+ + +  
Sbjct: 264 SLLDFL-KGETGKYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLRAANILVGENLVC 319
Query: 508 RLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLS-GR 566
           ++ DFGLAR+    +  +       + + APE    GR + ++DV+ FGIL+ E+ + GR
Sbjct: 320 KVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGR 379
Query: 567 RP 568
            P
Sbjct: 380 VP 381

>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With The Inhibitor Pha-739358 Length = 286

Iteration: 1
 Score = 72.8 bits (177), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 67/262 (25%), Positives = 120/262 (45%), Gaps = 26/262 (9%)
Query: 392 IAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDK 451
           +AVK +  E+      FL E + +  +KH +LV L G C RE     ++ ++M  G+L  
Sbjct: 42  VAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREP-PFYIIIEFMTYGNLLD 99
Query: 452 WIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKK-VLHRDIKSSNVLLDKEMNGRLG 510
           ++ +C+       E    VL  +A  +    E  EKK  +HRD+ + N L+ +    ++ 
Sbjct: 100 YLRECNRQ-----EVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVA 154
Query: 511 DFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLS-GRRPI 569
           DFGL+R+       +       + + APE  +  + S ++DV+ FG+L+ E+ + G  P 
Sbjct: 155 DFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 214
Query: 570 EEGKPNL-VEMVWELMVQGKXXXXXXXXXXXKGGFDEDEVERVLHLGLLCAYPDPRARPT 628
               P + +  V+EL+ +             +    E   E+V  L   C   +P  RP+
Sbjct: 215 ----PGIDLSQVYELLEKD-----------YRMERPEGCPEKVYELMRACWQWNPSDRPS 259
Query: 629 MRQVVKVLEGKI-EAGIENETE 649
             ++ +  E    E+ I +E E
Sbjct: 260 FAEIHQAFETMFQESSISDEVE 281

>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant Length = 327

Iteration: 1
 Score = 72.8 bits (177), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 58/203 (28%), Positives = 101/203 (49%), Gaps = 15/203 (7%)
Query: 389 GAEIAVKRI--SHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMEN 446
           G E+AVK I  +  N    +    E+  +  L H ++V L    + EK +L LV +Y   
Sbjct: 39  GKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEK-TLYLVMEYASG 97
Query: 447 GSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMN 506
           G +  ++       M   E R +  + + + V Y H+ +   ++HRD+K+ N+LLD +MN
Sbjct: 98  GEVFDYLVA--HGRMKEKEARAK-FRQIVSAVQYCHQKF---IVHRDLKAENLLLDADMN 151
Query: 507 GRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRAS-TQTDVFGFGILILEVLSG 565
            ++ DFG +     G    T    G+  Y APE+F   +    + DV+  G+++  ++SG
Sbjct: 152 IKIADFGFSNEFTFGNKLDT--FCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG 209
Query: 566 RRPIEEGKPNLVEMVWELMVQGK 588
             P +    NL E+  E +++GK
Sbjct: 210 SLPFD--GQNLKEL-RERVLRGK 229

>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: Wild Type Length = 327

Iteration: 1
 Score = 72.8 bits (177), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 58/203 (28%), Positives = 101/203 (49%), Gaps = 15/203 (7%)
Query: 389 GAEIAVKRI--SHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMEN 446
           G E+AVK I  +  N    +    E+  +  L H ++V L    + EK +L LV +Y   
Sbjct: 39  GKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEK-TLYLVMEYASG 97
Query: 447 GSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMN 506
           G +  ++       M   E R +  + + + V Y H+ +   ++HRD+K+ N+LLD +MN
Sbjct: 98  GEVFDYLVA--HGRMKEKEARAK-FRQIVSAVQYCHQKF---IVHRDLKAENLLLDADMN 151
Query: 507 GRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRAS-TQTDVFGFGILILEVLSG 565
            ++ DFG +     G    T    G+  Y APE+F   +    + DV+  G+++  ++SG
Sbjct: 152 IKIADFGFSNEFTFGNKLDT--FCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG 209
Query: 566 RRPIEEGKPNLVEMVWELMVQGK 588
             P +    NL E+  E +++GK
Sbjct: 210 SLPFD--GQNLKEL-RERVLRGK 229

>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain Length = 283

Iteration: 1
 Score = 72.8 bits (177), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 49/182 (26%), Positives = 93/182 (51%), Gaps = 8/182 (4%)
Query: 388 GGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENG 447
           G   +A+K +         AFL E   + +L+H+ LV L      E   + +V +YM  G
Sbjct: 38  GTTRVAIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE--PIYIVTEYMNKG 94
Query: 448 SLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNG 507
           SL  ++ + +    L   + + +   +A+G+ Y+        +HRD++++N+L+ + +  
Sbjct: 95  SLLDFL-KGETGKYLRLPQLVDMSAQIASGMAYVER---MNYVHRDLRAANILVGENLVC 150
Query: 508 RLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLS-GR 566
           ++ DFGLAR+    +  +       + + APE    GR + ++DV+ FGIL+ E+ + GR
Sbjct: 151 KVADFGLARLIEDNEWTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGR 210
Query: 567 RP 568
            P
Sbjct: 211 VP 212

>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By Roscovitine, Aloisine And Indirubin. Length = 292

Iteration: 1
 Score = 72.8 bits (177), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 58/184 (31%), Positives = 94/184 (51%), Gaps = 11/184 (5%)
Query: 392 IAVKRISHEND--GGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSL 449
           +A+KR+  ++D  G   + L EI  L  LKHK++V L      +K  L LV+++ +   L
Sbjct: 30  VALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDK-KLTLVFEFCDQ-DL 87
Query: 450 DKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRL 509
            K+   C+G   L  E     L  +  G+ + H    + VLHRD+K  N+L+++    +L
Sbjct: 88  KKYFDSCNGD--LDPEIVKSFLFQLLKGLGFCHS---RNVLHRDLKPQNLLINRNGELKL 142
Query: 510 GDFGLARMHGHGQVASTTRVVGTVGYLAPEV-FSSGRASTQTDVFGFGILILEVLSGRRP 568
            +FGLAR  G      +  VV T+ Y  P+V F +   ST  D++  G +  E+ +  RP
Sbjct: 143 ANFGLARAFGIPVRCYSAEVV-TLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRP 201
Query: 569 IEEG 572
           +  G
Sbjct: 202 LFPG 205

>pdb|4H58|A Chain A, Braf In Complex With Compound 3 Length = 275

Iteration: 1
 Score = 72.8 bits (177), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 53/187 (28%), Positives = 97/187 (51%), Gaps = 19/187 (10%)
Query: 391 EIAVK--RISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGS 448
           ++AVK   ++       +AF  E+  L + +H +++   G+    K  L +V  + E  S
Sbjct: 32  DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS--TKPQLAIVTQWCEGSS 89
Query: 449 LDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGR 508
           L   +   +    +   + I + +  A G+ YLH    K ++HRD+KS+N+ L +++  +
Sbjct: 90  LYHHLHIIETKFEMI--KLIDIARQTAQGMDYLHA---KSIIHRDLKSNNIFLHEDLTVK 144
Query: 509 LGDFGLA----RMHGHGQVASTTRVVGTVGYLAPEVF---SSGRASTQTDVFGFGILILE 561
           +GDFGLA    R  G  Q    +   G++ ++APEV         S Q+DV+ FGI++ E
Sbjct: 145 IGDFGLATVKSRWSGSHQFEQLS---GSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYE 201
Query: 562 VLSGRRP 568
           +++G+ P
Sbjct: 202 LMTGQLP 208

>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine Kinase Length = 495

Iteration: 1
 Score = 72.8 bits (177), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 62/261 (23%), Positives = 121/261 (46%), Gaps = 24/261 (9%)
Query: 392 IAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDK 451
           +AVK +  E+      FL E + +  +KH +LV L G C RE     ++ ++M  G+L  
Sbjct: 248 VAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREP-PFYIITEFMTYGNLLD 305
Query: 452 WIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGD 511
           ++ +C+    +S    + +   +++ + YL +   K  +HR++ + N L+ +    ++ D
Sbjct: 306 YLRECN-RQEVSAVVLLYMATQISSAMEYLEK---KNFIHRNLAARNCLVGENHLVKVAD 361
Query: 512 FGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLS-GRRPIE 570
           FGL+R+       +       + + APE  +  + S ++DV+ FG+L+ E+ + G  P  
Sbjct: 362 FGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY- 420
Query: 571 EGKPNL-VEMVWELMVQGKXXXXXXXXXXXKGGFDEDEVERVLHLGLLCAYPDPRARPTM 629
              P + +  V+EL+ +                  E   E+V  L   C   +P  RP+ 
Sbjct: 421 ---PGIDLSQVYELLEKDYRMER-----------PEGCPEKVYELMRACWQWNPSDRPSF 466
Query: 630 RQVVKVLEGKI-EAGIENETE 649
            ++ +  E    E+ I +E E
Sbjct: 467 AEIHQAFETMFQESSISDEVE 487

>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src Tyrosine Kinase Domain Complexed With Imatinib Length = 286

Iteration: 1
 Score = 72.8 bits (177), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 50/184 (27%), Positives = 93/184 (50%), Gaps = 12/184 (6%)
Query: 388 GGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENG 447
           G   +A+K +         AFL E   + +++H+ LV L      E   + +V +YM  G
Sbjct: 41  GTTRVAIKTLK-PGTMSPEAFLQEAQVMKKIRHEKLVQLYAVVSEE--PIYIVTEYMSKG 97
Query: 448 SLDKWIFQCDGSM--MLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEM 505
           SL  ++    G M   L   + + +   +A+G+ Y+        +HRD++++N+L+ + +
Sbjct: 98  SLLDFL---KGEMGKYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLRAANILVGENL 151
Query: 506 NGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLS- 564
             ++ DFGLAR+    +  +       + + APE    GR + ++DV+ FGIL+ E+ + 
Sbjct: 152 VCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTK 211
Query: 565 GRRP 568
           GR P
Sbjct: 212 GRVP 215

>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7 Length = 311

Iteration: 1
 Score = 72.4 bits (176), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 47/168 (27%), Positives = 85/168 (50%), Gaps = 8/168 (4%)
Query: 411 EISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRV 470
           E   + RL H   V L  +  ++   L     Y +NG L K+I +  GS   +C      
Sbjct: 79  ERDVMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKI-GSFDETCTRFYTA 136
Query: 471 LKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLAR-MHGHGQVASTTRV 529
             ++ + + YLH    K ++HRD+K  N+LL+++M+ ++ DFG A+ +    + A     
Sbjct: 137 --EIVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSF 191
Query: 530 VGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLV 577
           VGT  Y++PE+ +   A   +D++  G +I ++++G  P   G   L+
Sbjct: 192 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLI 239

>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6 Length = 311

Iteration: 1
 Score = 72.4 bits (176), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 47/168 (27%), Positives = 85/168 (50%), Gaps = 8/168 (4%)
Query: 411 EISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRV 470
           E   + RL H   V L  +  ++   L     Y +NG L K+I +  GS   +C      
Sbjct: 79  ERDVMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKI-GSFDETCTRFYTA 136
Query: 471 LKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLAR-MHGHGQVASTTRV 529
             ++ + + YLH    K ++HRD+K  N+LL+++M+ ++ DFG A+ +    + A     
Sbjct: 137 --EIVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF 191
Query: 530 VGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLV 577
           VGT  Y++PE+ +   A   +D++  G +I ++++G  P   G   L+
Sbjct: 192 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLI 239

>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain In Complex With Atp Length = 311

Iteration: 1
 Score = 72.4 bits (176), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 47/168 (27%), Positives = 85/168 (50%), Gaps = 8/168 (4%)
Query: 411 EISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRV 470
           E   + RL H   V L  +  ++   L     Y +NG L K+I +  GS   +C      
Sbjct: 82  ERDVMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKI-GSFDETCTRFYTA 139
Query: 471 LKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLAR-MHGHGQVASTTRV 529
             ++ + + YLH    K ++HRD+K  N+LL+++M+ ++ DFG A+ +    + A     
Sbjct: 140 --EIVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF 194
Query: 530 VGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLV 577
           VGT  Y++PE+ +   A   +D++  G +I ++++G  P   G   L+
Sbjct: 195 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEGLI 242

>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2 And Jak3 Kinase Domains In Complex With Cp-690550 And Cmp-6 Length = 318

Iteration: 1
 Score = 72.4 bits (176), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 66/260 (25%), Positives = 116/260 (44%), Gaps = 18/260 (6%)
Query: 386 EGGGAEIAVKRISHENDGGTRA-FLAEISSLGRLKHKSLVGLRGWCKRE-KGSLMLVYDY 443
           +G G  +AVK +  +     R+ +  EI  L  L H+ ++  +G C+     SL LV +Y
Sbjct: 57  DGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQLVMEY 116
Query: 444 MENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDK 503
           +  GSL  ++        +   + +   + +  G+ YLH    +  +HRD+ + NVLLD 
Sbjct: 117 VPLGSLRDYL----PRHSIGLAQLLLFAQQICEGMAYLHA---QHYIHRDLAARNVLLDN 169
Query: 504 EMNGRLGDFGLARMHGHGQVASTTRVVG--TVGYLAPEVFSSGRASTQTDVFGFGILILE 561
           +   ++GDFGLA+    G      R  G   V + APE     +    +DV+ FG+ + E
Sbjct: 170 DRLVKIGDFGLAKAVPEGHEXYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYE 229
Query: 562 VLSGRRPIEEGKPNLVEMVWELMVQGKXXXXXXXXXXXKGGF----DEDEVERVLHLGLL 617
           +L+     +      +E++   + QG+           +G      D+   E V HL   
Sbjct: 230 LLTHCDSSQSPPTKFLELIG--IAQGQMTVLRLTELLERGERLPRPDKCPAE-VYHLMKN 286
Query: 618 CAYPDPRARPTMRQVVKVLE 637
           C   +   RPT   ++ +L+
Sbjct: 287 CWETEASFRPTFENLIPILK 306

>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase Catalytic Domain Complexed With Type Ii Inhibitor Length = 287

Iteration: 1
 Score = 72.4 bits (176), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 67/262 (25%), Positives = 120/262 (45%), Gaps = 26/262 (9%)
Query: 392 IAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDK 451
           +AVK +  E+      FL E + +  +KH +LV L G C RE     ++ ++M  G+L  
Sbjct: 43  VAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREP-PFYIITEFMTYGNLLD 100
Query: 452 WIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKK-VLHRDIKSSNVLLDKEMNGRLG 510
           ++ +C+       E    VL  +A  +    E  EKK  +HRD+ + N L+ +    ++ 
Sbjct: 101 YLRECNRQ-----EVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVA 155
Query: 511 DFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLS-GRRPI 569
           DFGL+R+       +       + + APE  +  + S ++DV+ FG+L+ E+ + G  P 
Sbjct: 156 DFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 215
Query: 570 EEGKPNL-VEMVWELMVQGKXXXXXXXXXXXKGGFDEDEVERVLHLGLLCAYPDPRARPT 628
               P + +  V+EL+ +             +    E   E+V  L   C   +P  RP+
Sbjct: 216 ----PGIDLSQVYELLEKD-----------YRMERPEGCPEKVYELMRACWQWNPSDRPS 260
Query: 629 MRQVVKVLEGKI-EAGIENETE 649
             ++ +  E    E+ I +E E
Sbjct: 261 FAEIHQAFETMFQESSISDEVE 282

>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase Domain Length = 287

Iteration: 1
 Score = 72.4 bits (176), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 67/262 (25%), Positives = 120/262 (45%), Gaps = 26/262 (9%)
Query: 392 IAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDK 451
           +AVK +  E+      FL E + +  +KH +LV L G C RE     ++ ++M  G+L  
Sbjct: 43  VAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREP-PFYIITEFMTYGNLLD 100
Query: 452 WIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKK-VLHRDIKSSNVLLDKEMNGRLG 510
           ++ +C+       E    VL  +A  +    E  EKK  +HRD+ + N L+ +    ++ 
Sbjct: 101 YLRECNRQ-----EVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVA 155
Query: 511 DFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLS-GRRPI 569
           DFGL+R+       +       + + APE  +  + S ++DV+ FG+L+ E+ + G  P 
Sbjct: 156 DFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 215
Query: 570 EEGKPNL-VEMVWELMVQGKXXXXXXXXXXXKGGFDEDEVERVLHLGLLCAYPDPRARPT 628
               P + +  V+EL+ +             +    E   E+V  L   C   +P  RP+
Sbjct: 216 ----PGIDLSQVYELLEKD-----------YRMERPEGCPEKVYELMRACWQWNPSDRPS 260
Query: 629 MRQVVKVLEGKI-EAGIENETE 649
             ++ +  E    E+ I +E E
Sbjct: 261 FAEIHQAFETMFQESSISDEVE 282

>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A Tetrahydronaphthalene Inhibitor Length = 282

Iteration: 1
 Score = 72.4 bits (176), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 53/187 (28%), Positives = 97/187 (51%), Gaps = 19/187 (10%)
Query: 391 EIAVK--RISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGS 448
           ++AVK   ++       +AF  E+  L + +H +++   G+    K  L +V  + E  S
Sbjct: 34  DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS--TKPQLAIVTQWCEGSS 91
Query: 449 LDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGR 508
           L   +   +    +   + I + +  A G+ YLH    K ++HRD+KS+N+ L +++  +
Sbjct: 92  LYHHLHIIETKFEMI--KLIDIARQTAQGMDYLHA---KSIIHRDLKSNNIFLHEDLTVK 146
Query: 509 LGDFGLA----RMHGHGQVASTTRVVGTVGYLAPEVF---SSGRASTQTDVFGFGILILE 561
           +GDFGLA    R  G  Q    +   G++ ++APEV         S Q+DV+ FGI++ E
Sbjct: 147 IGDFGLATVKSRWSGSHQFEQLS---GSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYE 203
Query: 562 VLSGRRP 568
           +++G+ P
Sbjct: 204 LMTGQLP 210

>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex With Inno-406 Length = 293

Iteration: 1
 Score = 72.4 bits (176), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 67/262 (25%), Positives = 120/262 (45%), Gaps = 26/262 (9%)
Query: 392 IAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDK 451
           +AVK +  E+      FL E + +  +KH +LV L G C RE     ++ ++M  G+L  
Sbjct: 46  VAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREP-PFYIITEFMTYGNLLD 103
Query: 452 WIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKK-VLHRDIKSSNVLLDKEMNGRLG 510
           ++ +C+       E    VL  +A  +    E  EKK  +HRD+ + N L+ +    ++ 
Sbjct: 104 YLRECNRQ-----EVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVA 158
Query: 511 DFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLS-GRRPI 569
           DFGL+R+       +       + + APE  +  + S ++DV+ FG+L+ E+ + G  P 
Sbjct: 159 DFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 218
Query: 570 EEGKPNL-VEMVWELMVQGKXXXXXXXXXXXKGGFDEDEVERVLHLGLLCAYPDPRARPT 628
               P + +  V+EL+ +             +    E   E+V  L   C   +P  RP+
Sbjct: 219 ----PGIDLSQVYELLEKD-----------YRMERPEGCPEKVYELMRACWQWNPSDRPS 263
Query: 629 MRQVVKVLEGKI-EAGIENETE 649
             ++ +  E    E+ I +E E
Sbjct: 264 FAEIHQAFETMFQESSISDEVE 285

>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase Activity Length = 286

Iteration: 1
 Score = 72.4 bits (176), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 51/184 (27%), Positives = 92/184 (50%), Gaps = 12/184 (6%)
Query: 388 GGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENG 447
           G   +A+K +         AFL E   + +L+H+ LV L      E   + +V +YM  G
Sbjct: 41  GTTRVAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE--PIYIVTEYMSKG 97
Query: 448 SLDKWIFQCDGSM--MLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEM 505
           SL  ++    G M   L   + + +   +A+G+ Y+        +HRD+ ++N+L+ + +
Sbjct: 98  SLLDFL---KGEMGKYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLAAANILVGENL 151
Query: 506 NGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLS- 564
             ++ DFGLAR+    +  +       + + APE    GR + ++DV+ FGIL+ E+ + 
Sbjct: 152 VCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTK 211
Query: 565 GRRP 568
           GR P
Sbjct: 212 GRVP 215

>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006 Length = 276

Iteration: 1
 Score = 72.4 bits (176), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 55/189 (29%), Positives = 98/189 (51%), Gaps = 23/189 (12%)
Query: 391 EIAVK--RISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGS 448
           ++AVK   ++       +AF  E+  L + +H +++   G+    K  L +V  + E  S
Sbjct: 32  DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS--TKPQLAIVTQWCEGSS 89
Query: 449 L--DKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMN 506
           L     I +    M+    + I + +  A G+ YLH    K ++HRD+KS+N+ L +++ 
Sbjct: 90  LYHHLHIIETKFEMI----KLIDIARQTAQGMDYLHA---KSIIHRDLKSNNIFLHEDLT 142
Query: 507 GRLGDFGLA----RMHGHGQVASTTRVVGTVGYLAPEVF---SSGRASTQTDVFGFGILI 559
            ++GDFGLA    R  G  Q    +   G++ ++APEV         S Q+DV+ FGI++
Sbjct: 143 VKIGDFGLATEKSRWSGSHQFEQLS---GSILWMAPEVIRMQDKNPYSFQSDVYAFGIVL 199
Query: 560 LEVLSGRRP 568
            E+++G+ P
Sbjct: 200 YELMTGQLP 208

>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric Activator Ps171 Bound To The Pif-Pocket Length = 311

Iteration: 1
 Score = 72.4 bits (176), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 47/168 (27%), Positives = 85/168 (50%), Gaps = 8/168 (4%)
Query: 411 EISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRV 470
           E   + RL H   V L  +  ++   L     Y +NG L K+I +  GS   +C      
Sbjct: 82  ERDVMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKI-GSFDETCTRFYTA 139
Query: 471 LKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLAR-MHGHGQVASTTRV 529
             ++ + + YLH    K ++HRD+K  N+LL+++M+ ++ DFG A+ +    + A     
Sbjct: 140 --EIVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF 194
Query: 530 VGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLV 577
           VGT  Y++PE+ +   A   +D++  G +I ++++G  P   G   L+
Sbjct: 195 VGTAQYVSPELLTEKSAXKSSDLWALGCIIYQLVAGLPPFRAGNEGLI 242

>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885 Length = 281

Iteration: 1
 Score = 72.4 bits (176), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 55/189 (29%), Positives = 99/189 (52%), Gaps = 23/189 (12%)
Query: 391 EIAVK--RISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGS 448
           ++AVK   ++       +AF  E+  L + +H +++   G+    K  L +V  + E  S
Sbjct: 37  DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS--TKPQLAIVTQWCEGSS 94
Query: 449 L--DKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMN 506
           L     I +    M+    + I + +  A G+ YLH    K ++HRD+KS+N+ L +++ 
Sbjct: 95  LYHHLHIIETKFEMI----KLIDIARQTAQGMDYLHA---KSIIHRDLKSNNIFLHEDLT 147
Query: 507 GRLGDFGLA----RMHGHGQVASTTRVVGTVGYLAPEVF---SSGRASTQTDVFGFGILI 559
            ++GDFGLA    R  G  Q     ++ G++ ++APEV         S Q+DV+ FGI++
Sbjct: 148 VKIGDFGLATVKSRWSGSHQFE---QLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVL 204
Query: 560 LEVLSGRRP 568
            E+++G+ P
Sbjct: 205 YELMTGQLP 213

>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase Length = 278

Iteration: 1
 Score = 72.4 bits (176), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 51/185 (27%), Positives = 90/185 (48%), Gaps = 10/185 (5%)
Query: 389 GAEIAVKRISHE---NDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYME 445
           G E+A+K I  +     G  +    E+    +LKH S++ L  + + +   + LV +   
Sbjct: 36  GLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFE-DSNYVYLVLEMCH 94
Query: 446 NGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEM 505
           NG +++++   +     S  E    +  +  G+LYLH      +LHRD+  SN+LL + M
Sbjct: 95  NGEMNRYLK--NRVKPFSENEARHFMHQIITGMLYLHS---HGILHRDLTLSNLLLTRNM 149
Query: 506 NGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSG 565
           N ++ DFGLA           T + GT  Y++PE+ +      ++DV+  G +   +L G
Sbjct: 150 NIKIADFGLATQLKMPHEKHYT-LCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIG 208
Query: 566 RRPIE 570
           R P +
Sbjct: 209 RPPFD 213

>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With Bim-3 Length = 286

Iteration: 1
 Score = 72.4 bits (176), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 47/168 (27%), Positives = 85/168 (50%), Gaps = 8/168 (4%)
Query: 411 EISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRV 470
           E   + RL H   V L  +  ++   L     Y +NG L K+I +  GS   +C      
Sbjct: 59  ERDVMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKI-GSFDETCTRFYTA 116
Query: 471 LKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLAR-MHGHGQVASTTRV 529
             ++ + + YLH    K ++HRD+K  N+LL+++M+ ++ DFG A+ +    + A     
Sbjct: 117 --EIVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF 171
Query: 530 VGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLV 577
           VGT  Y++PE+ +   A   +D++  G +I ++++G  P   G   L+
Sbjct: 172 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLI 219

>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i Length = 312

Iteration: 1
 Score = 72.4 bits (176), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 47/168 (27%), Positives = 85/168 (50%), Gaps = 8/168 (4%)
Query: 411 EISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRV 470
           E   + RL H   V L  +  ++   L     Y +NG L K+I +  GS   +C      
Sbjct: 83  ERDVMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKI-GSFDETCTRFYTA 140
Query: 471 LKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLAR-MHGHGQVASTTRV 529
             ++ + + YLH    K ++HRD+K  N+LL+++M+ ++ DFG A+ +    + A     
Sbjct: 141 --EIVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF 195
Query: 530 VGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLV 577
           VGT  Y++PE+ +   A   +D++  G +I ++++G  P   G   L+
Sbjct: 196 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLI 243

>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With Irreversible Inhibitor Length = 286

Iteration: 1
 Score = 72.4 bits (176), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 50/184 (27%), Positives = 92/184 (50%), Gaps = 12/184 (6%)
Query: 388 GGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENG 447
           G   +A+K +         AFL E   + +L+H+ LV L      E   + +V +YM  G
Sbjct: 41  GTTRVAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE--PIYIVMEYMSKG 97
Query: 448 SLDKWIFQCDGSM--MLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEM 505
            L  ++    G M   L   + + +   +A+G+ Y+        +HRD++++N+L+ + +
Sbjct: 98  CLLDFL---KGEMGKYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLRAANILVGENL 151
Query: 506 NGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLS- 564
             ++ DFGLAR+    +  +       + + APE    GR + ++DV+ FGIL+ E+ + 
Sbjct: 152 VCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTK 211
Query: 565 GRRP 568
           GR P
Sbjct: 212 GRVP 215

>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With A [1, 3]thiazolo[5,4-B]pyridine Derivative Length = 284

Iteration: 1
 Score = 72.4 bits (176), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 55/189 (29%), Positives = 98/189 (51%), Gaps = 23/189 (12%)
Query: 391 EIAVK--RISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGS 448
           ++AVK   ++       +AF  E+  L + +H +++   G+    K  L +V  + E  S
Sbjct: 37  DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS--TKPQLAIVTQWCEGSS 94
Query: 449 L--DKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMN 506
           L     I +    M+    + I + +  A G+ YLH    K ++HRD+KS+N+ L +++ 
Sbjct: 95  LYHHLHIIETKFEMI----KLIDIARQTAQGMDYLHA---KSIIHRDLKSNNIFLHEDLT 147
Query: 507 GRLGDFGLA----RMHGHGQVASTTRVVGTVGYLAPEVF---SSGRASTQTDVFGFGILI 559
            ++GDFGLA    R  G  Q    +   G++ ++APEV         S Q+DV+ FGI++
Sbjct: 148 VKIGDFGLATVKSRWSGSHQFEQLS---GSILWMAPEVIRMQDKNPYSFQSDVYAFGIVL 204
Query: 560 LEVLSGRRP 568
            E+++G+ P
Sbjct: 205 YELMTGQLP 213

>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent Kinase- 1 (Pdk-1)catalytic Domain Bound To A Dibenzonaphthyridine Inhibitor Length = 312

Iteration: 1
 Score = 72.4 bits (176), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 47/168 (27%), Positives = 85/168 (50%), Gaps = 8/168 (4%)
Query: 411 EISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRV 470
           E   + RL H   V L  +  ++   L     Y +NG L K+I +  GS   +C      
Sbjct: 83  ERDVMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKI-GSFDETCTRFYTA 140
Query: 471 LKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLAR-MHGHGQVASTTRV 529
             ++ + + YLH    K ++HRD+K  N+LL+++M+ ++ DFG A+ +    + A     
Sbjct: 141 --EIVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSF 195
Query: 530 VGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLV 577
           VGT  Y++PE+ +   A   +D++  G +I ++++G  P   G   L+
Sbjct: 196 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLI 243

>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1 Catalytic Domain Length = 289

Iteration: 1
 Score = 72.4 bits (176), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 47/168 (27%), Positives = 85/168 (50%), Gaps = 8/168 (4%)
Query: 411 EISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRV 470
           E   + RL H   V L  +  ++   L     Y +NG L K+I +  GS   +C      
Sbjct: 60  ERDVMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKI-GSFDETCTRFYTA 117
Query: 471 LKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLAR-MHGHGQVASTTRV 529
             ++ + + YLH    K ++HRD+K  N+LL+++M+ ++ DFG A+ +    + A     
Sbjct: 118 --EIVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF 172
Query: 530 VGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLV 577
           VGT  Y++PE+ +   A   +D++  G +I ++++G  P   G   L+
Sbjct: 173 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLI 220

>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx Length = 314

Iteration: 1
 Score = 72.4 bits (176), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 47/168 (27%), Positives = 85/168 (50%), Gaps = 8/168 (4%)
Query: 411 EISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRV 470
           E   + RL H   V L  +  ++   L     Y +NG L K+I +  GS   +C      
Sbjct: 85  ERDVMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKI-GSFDETCTRFYTA 142
Query: 471 LKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLAR-MHGHGQVASTTRV 529
             ++ + + YLH    K ++HRD+K  N+LL+++M+ ++ DFG A+ +    + A     
Sbjct: 143 --EIVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF 197
Query: 530 VGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLV 577
           VGT  Y++PE+ +   A   +D++  G +I ++++G  P   G   L+
Sbjct: 198 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLI 245

>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form Length = 279

Iteration: 1
 Score = 72.4 bits (176), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 45/165 (27%), Positives = 90/165 (54%), Gaps = 6/165 (3%)
Query: 405 TRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSC 464
            +AFL E + +  L+H  LV L     +E+  + ++ ++M  GSL  ++   +G  +L  
Sbjct: 51  VQAFLEEANLMKTLQHDKLVRLYAVVTKEE-PIYIITEFMAKGSLLDFLKSDEGGKVL-L 108
Query: 465 EERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVA 524
            + I     +A G+ Y+     K  +HRD++++NVL+ + +  ++ DFGLAR+    +  
Sbjct: 109 PKLIDFSAQIAEGMAYIER---KNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYT 165
Query: 525 STTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLS-GRRP 568
           +       + + APE  + G  + +++V+ FGIL+ E+++ G+ P
Sbjct: 166 AREGAKFPIKWTAPEAINFGCFTIKSNVWSFGILLYEIVTYGKIP 210

>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With Ly333531 Length = 310

Iteration: 1
 Score = 72.4 bits (176), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 47/168 (27%), Positives = 85/168 (50%), Gaps = 8/168 (4%)
Query: 411 EISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRV 470
           E   + RL H   V L  +  ++   L     Y +NG L K+I +  GS   +C      
Sbjct: 80  ERDVMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKI-GSFDETCTRFYTA 137
Query: 471 LKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLAR-MHGHGQVASTTRV 529
             ++ + + YLH    K ++HRD+K  N+LL+++M+ ++ DFG A+ +    + A     
Sbjct: 138 --EIVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF 192
Query: 530 VGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLV 577
           VGT  Y++PE+ +   A   +D++  G +I ++++G  P   G   L+
Sbjct: 193 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLI 240

>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A Pyrazoloquinazoline Inhibitor Length = 309

Iteration: 1
 Score = 72.0 bits (175), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 47/168 (27%), Positives = 85/168 (50%), Gaps = 8/168 (4%)
Query: 411 EISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRV 470
           E   + RL H   V L  +  ++   L     Y +NG L K+I +  GS   +C      
Sbjct: 80  ERDVMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKI-GSFDETCTRFYTA 137
Query: 471 LKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLAR-MHGHGQVASTTRV 529
             ++ + + YLH    K ++HRD+K  N+LL+++M+ ++ DFG A+ +    + A     
Sbjct: 138 --EIVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF 192
Query: 530 VGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLV 577
           VGT  Y++PE+ +   A   +D++  G +I ++++G  P   G   L+
Sbjct: 193 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLI 240

>pdb|1Z5M|A Chain A, Crystal Structure Of N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl) Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2- Dimethylpropanediamide Complexed With Human Pdk1 Length = 286

Iteration: 1
 Score = 72.0 bits (175), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 47/168 (27%), Positives = 85/168 (50%), Gaps = 8/168 (4%)
Query: 411 EISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRV 470
           E   + RL H   V L  +  ++   L     Y +NG L K+I +  GS   +C      
Sbjct: 57  ERDVMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKI-GSFDETCTRFYTA 114
Query: 471 LKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLAR-MHGHGQVASTTRV 529
             ++ + + YLH    K ++HRD+K  N+LL+++M+ ++ DFG A+ +    + A     
Sbjct: 115 --EIVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF 169
Query: 530 VGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLV 577
           VGT  Y++PE+ +   A   +D++  G +I ++++G  P   G   L+
Sbjct: 170 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLI 217

>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3- Phosphoinositide Dependent Kinase (Pdk1) Length = 311

Iteration: 1
 Score = 72.0 bits (175), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 47/168 (27%), Positives = 85/168 (50%), Gaps = 8/168 (4%)
Query: 411 EISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRV 470
           E   + RL H   V L  +  ++   L     Y +NG L K+I +  GS   +C      
Sbjct: 82  ERDVMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKI-GSFDETCTRFYTA 139
Query: 471 LKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLAR-MHGHGQVASTTRV 529
             ++ + + YLH    K ++HRD+K  N+LL+++M+ ++ DFG A+ +    + A     
Sbjct: 140 --EIVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF 194
Query: 530 VGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLV 577
           VGT  Y++PE+ +   A   +D++  G +I ++++G  P   G   L+
Sbjct: 195 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLI 242

>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human 5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant (T172d) Length = 276

Iteration: 1
 Score = 72.0 bits (175), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 54/173 (31%), Positives = 84/173 (48%), Gaps = 13/173 (7%)
Query: 411 EISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRV 470
           EI +L   +H  ++ L           M V +Y+  G L  +I  C    +   E R R+
Sbjct: 61  EIQNLKLFRHPHIIKLYQVISTPTDFFM-VMEYVSGGELFDYI--CKHGRVEEMEAR-RL 116
Query: 471 LKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRVV 530
            + + + V Y H      V+HRD+K  NVLLD  MN ++ DFGL+ M   G+    +   
Sbjct: 117 FQQILSAVDYCHR---HMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRDS--C 171
Query: 531 GTVGYLAPEVFSSGR--ASTQTDVFGFGILILEVLSGRRPI-EEGKPNLVEMV 580
           G+  Y APEV  SGR  A  + D++  G+++  +L G  P  +E  P L + +
Sbjct: 172 GSPNYAAPEVI-SGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKI 223

>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through Fragment-Based Lead Discovery Length = 311

Iteration: 1
 Score = 72.0 bits (175), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 47/168 (27%), Positives = 85/168 (50%), Gaps = 8/168 (4%)
Query: 411 EISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRV 470
           E   + RL H   V L  +  ++   L     Y +NG L K+I +  GS   +C      
Sbjct: 82  ERDVMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKI-GSFDETCTRFYTA 139
Query: 471 LKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLAR-MHGHGQVASTTRV 529
             ++ + + YLH    K ++HRD+K  N+LL+++M+ ++ DFG A+ +    + A     
Sbjct: 140 --EIVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF 194
Query: 530 VGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLV 577
           VGT  Y++PE+ +   A   +D++  G +I ++++G  P   G   L+
Sbjct: 195 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLI 242

>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A Pyrazoloquinazoline Inhibitor Length = 309

Iteration: 1
 Score = 72.0 bits (175), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 47/168 (27%), Positives = 85/168 (50%), Gaps = 8/168 (4%)
Query: 411 EISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRV 470
           E   + RL H   V L  +  ++   L     Y +NG L K+I +  GS   +C      
Sbjct: 80  ERDVMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKI-GSFDETCTRFYTA 137
Query: 471 LKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLAR-MHGHGQVASTTRV 529
             ++ + + YLH    K ++HRD+K  N+LL+++M+ ++ DFG A+ +    + A     
Sbjct: 138 --EIVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF 192
Query: 530 VGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLV 577
           VGT  Y++PE+ +   A   +D++  G +I ++++G  P   G   L+
Sbjct: 193 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLI 240

>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES BY Mimicking Host Substrates Length = 319

Iteration: 1
 Score = 72.0 bits (175), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 53/185 (28%), Positives = 91/185 (49%), Gaps = 12/185 (6%)
Query: 389 GAEIAVKRI--SHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMEN 446
           G E+AVK I  +  N    +    E+  +  L H ++V L    + EK +L LV +Y   
Sbjct: 32  GKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEK-TLYLVMEYASG 90
Query: 447 GSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMN 506
           G +  ++       M   E R +  + + + V Y H+   K ++HRD+K+ N+LLD +MN
Sbjct: 91  GEVFDYLVA--HGWMKEKEARAK-FRQIVSAVQYCHQ---KFIVHRDLKAENLLLDADMN 144
Query: 507 GRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRAS-TQTDVFGFGILILEVLSG 565
            ++ DFG +     G    T    G+  Y APE+F   +    + DV+  G+++  ++SG
Sbjct: 145 IKIADFGFSNEFTFGNKLDT--FCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG 202
Query: 566 RRPIE 570
             P +
Sbjct: 203 SLPFD 207

>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In Complex With Compound 9 Length = 311

Iteration: 1
 Score = 72.0 bits (175), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 47/168 (27%), Positives = 85/168 (50%), Gaps = 8/168 (4%)
Query: 411 EISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRV 470
           E   + RL H   V L  +  ++   L     Y +NG L K+I +  GS   +C      
Sbjct: 82  ERDVMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKI-GSFDETCTRFYTA 139
Query: 471 LKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLAR-MHGHGQVASTTRV 529
             ++ + + YLH    K ++HRD+K  N+LL+++M+ ++ DFG A+ +    + A     
Sbjct: 140 --EIVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF 194
Query: 530 VGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLV 577
           VGT  Y++PE+ +   A   +D++  G +I ++++G  P   G   L+
Sbjct: 195 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLI 242

>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With Covalent Inhibitor Length = 286

Iteration: 1
 Score = 72.0 bits (175), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 50/184 (27%), Positives = 92/184 (50%), Gaps = 12/184 (6%)
Query: 388 GGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENG 447
           G   +A+K +         AFL E   + +L+H+ LV L      E   + +V +YM  G
Sbjct: 41  GTTRVAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE--PIYIVTEYMSKG 97
Query: 448 SLDKWIFQCDGSM--MLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEM 505
            L  ++    G M   L   + + +   +A+G+ Y+        +HRD++++N+L+ + +
Sbjct: 98  CLLDFL---KGEMGKYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLRAANILVGENL 151
Query: 506 NGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLS- 564
             ++ DFGLAR+    +  +       + + APE    GR + ++DV+ FGIL+ E+ + 
Sbjct: 152 VCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTK 211
Query: 565 GRRP 568
           GR P
Sbjct: 212 GRVP 215

>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead Compound Length = 292

Iteration: 1
 Score = 72.0 bits (175), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 47/168 (27%), Positives = 85/168 (50%), Gaps = 8/168 (4%)
Query: 411 EISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRV 470
           E   + RL H   V L  +  ++   L     Y +NG L K+I +  GS   +C      
Sbjct: 64  ERDVMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKI-GSFDETCTRFYTA 121
Query: 471 LKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLAR-MHGHGQVASTTRV 529
             ++ + + YLH    K ++HRD+K  N+LL+++M+ ++ DFG A+ +    + A     
Sbjct: 122 --EIVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF 176
Query: 530 VGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLV 577
           VGT  Y++PE+ +   A   +D++  G +I ++++G  P   G   L+
Sbjct: 177 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLI 224

>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8 Length = 286

Iteration: 1
 Score = 72.0 bits (175), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 47/168 (27%), Positives = 85/168 (50%), Gaps = 8/168 (4%)
Query: 411 EISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRV 470
           E   + RL H   V L  +  ++   L     Y +NG L K+I +  GS   +C      
Sbjct: 58  ERDVMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKI-GSFDETCTRFYTA 115
Query: 471 LKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLAR-MHGHGQVASTTRV 529
             ++ + + YLH    K ++HRD+K  N+LL+++M+ ++ DFG A+ +    + A     
Sbjct: 116 --EIVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF 170
Query: 530 VGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLV 577
           VGT  Y++PE+ +   A   +D++  G +I ++++G  P   G   L+
Sbjct: 171 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLI 218

>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain Length = 310

Iteration: 1
 Score = 72.0 bits (175), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 47/168 (27%), Positives = 85/168 (50%), Gaps = 8/168 (4%)
Query: 411 EISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRV 470
           E   + RL H   V L  +  ++   L     Y +NG L K+I +  GS   +C      
Sbjct: 80  ERDVMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKI-GSFDETCTRFYTA 137
Query: 471 LKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLAR-MHGHGQVASTTRV 529
             ++ + + YLH    K ++HRD+K  N+LL+++M+ ++ DFG A+ +    + A     
Sbjct: 138 --EIVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAF 192
Query: 530 VGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLV 577
           VGT  Y++PE+ +   A   +D++  G +I ++++G  P   G   L+
Sbjct: 193 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLI 240

>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With Quinoline-Thiadiazole- Thiophene Inhibitor Length = 302

Iteration: 1
 Score = 72.0 bits (175), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 67/260 (25%), Positives = 122/260 (46%), Gaps = 18/260 (6%)
Query: 386 EGGGAEIAVKRISHENDGGTRA-FLAEISSLGRLKHKSLVGLRGWCKRE-KGSLMLVYDY 443
           +G G  +AVK +  +     R+ +  EI  L  L H+ ++  +G C+ + + SL LV +Y
Sbjct: 40  DGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEY 99
Query: 444 MENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDK 503
           +  GSL  ++ +   S+ L+  + +   + +  G+ YLH    +  +HR++ + NVLLD 
Sbjct: 100 VPLGSLRDYLPR--HSIGLA--QLLLFAQQICEGMAYLHS---QHYIHRNLAARNVLLDN 152
Query: 504 EMNGRLGDFGLARMHGHGQVASTTRVVG--TVGYLAPEVFSSGRASTQTDVFGFGILILE 561
           +   ++GDFGLA+    G      R  G   V + APE     +    +DV+ FG+ + E
Sbjct: 153 DRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYE 212
Query: 562 VLSGRRPIEEGKPNLVEMVWELMVQGKXXXXXXXXXXXKGGF----DEDEVERVLHLGLL 617
           +L+     +      +E++   + QG+           +G      D+   E V HL   
Sbjct: 213 LLTHCDSSQSPPTKFLELIG--IAQGQMTVLRLTELLERGERLPRPDKCPCE-VYHLMKN 269
Query: 618 CAYPDPRARPTMRQVVKVLE 637
           C   +   RPT   ++ +L+
Sbjct: 270 CWETEASFRPTFENLIPILK 289

>pdb|1AVB|A Chain A, Arcelin-1 From Phaseolus Vulgaris L Length = 226

Iteration: 1
 Score = 72.0 bits (175), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 70/255 (27%), Positives = 109/255 (42%), Gaps = 45/255 (17%)
Query: 28  FVFNGFNSSNLSLYGTATVESR-ILTLTN---STTFTIGRALYPSKIPTKRPNSSYVYPF 83
           F    FN +NL L G ATV S   L LTN   +   ++GRA Y + I         +  F
Sbjct: 6   FNVETFNKTNLILQGDATVSSEGHLLLTNVKGNEEDSMGRAFYSAPIQINDRTIDNLASF 65
Query: 84  STSFIFAMAPYKGVLAGHGLVFLFVPFHGIKGATEAQHLGLFNRTNDGNSSNHVFGVEFD 143
           ST+F F +       + +GL F  VP  G +   + ++LGLFN TN    + H   V FD
Sbjct: 66  STNFTFRINAKNIENSAYGLAFALVPV-GSRPKLKGRYLGLFNTTNYDRDA-HTVAVVFD 123
Query: 144 VFKNQEFNDIDENHVGIDVNSLTSVSAHAAGYWPDNQXXXXXXXXXXXXXXXEKSFKELK 203
              N+         + IDVNS+  ++  +  +                            
Sbjct: 124 TVSNR---------IEIDVNSIRPIATESCNFGH-------------------------- 148
Query: 204 LNNGKNYQVWIDYADSFINITMVEAGMKRPKRPLLSVPLNLSGVLEDEMYVGFTAATG-- 261
            NNG+  +V I Y     ++ +        ++  +S  + L   +ED + VGF+A +G  
Sbjct: 149 -NNGEKAEVRITYDSPKNDLRVSLLYPSSEEKCHVSATVPLEKEVEDWVSVGFSATSGSK 207
Query: 262 -QLVESHKILAWSFS 275
            +  E+H +L+WSFS
Sbjct: 208 KETTETHNVLSWSFS 222

>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6 Length = 302

Iteration: 1
 Score = 72.0 bits (175), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 67/260 (25%), Positives = 122/260 (46%), Gaps = 18/260 (6%)
Query: 386 EGGGAEIAVKRISHENDGGTRA-FLAEISSLGRLKHKSLVGLRGWCKRE-KGSLMLVYDY 443
           +G G  +AVK +  +     R+ +  EI  L  L H+ ++  +G C+ + + SL LV +Y
Sbjct: 40  DGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEY 99
Query: 444 MENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDK 503
           +  GSL  ++ +   S+ L+  + +   + +  G+ YLH    +  +HR++ + NVLLD 
Sbjct: 100 VPLGSLRDYLPR--HSIGLA--QLLLFAQQICEGMAYLHA---QHYIHRNLAARNVLLDN 152
Query: 504 EMNGRLGDFGLARMHGHGQVASTTRVVG--TVGYLAPEVFSSGRASTQTDVFGFGILILE 561
           +   ++GDFGLA+    G      R  G   V + APE     +    +DV+ FG+ + E
Sbjct: 153 DRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYE 212
Query: 562 VLSGRRPIEEGKPNLVEMVWELMVQGKXXXXXXXXXXXKGGF----DEDEVERVLHLGLL 617
           +L+     +      +E++   + QG+           +G      D+   E V HL   
Sbjct: 213 LLTHCDSSQSPPTKFLELIG--IAQGQMTVLRLTELLERGERLPRPDKCPCE-VYHLMKN 269
Query: 618 CAYPDPRARPTMRQVVKVLE 637
           C   +   RPT   ++ +L+
Sbjct: 270 CWETEASFRPTFENLIPILK 289

>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: K82r Mutant Length = 327

Iteration: 1
 Score = 71.6 bits (174), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 57/203 (28%), Positives = 101/203 (49%), Gaps = 15/203 (7%)
Query: 389 GAEIAVKRI--SHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMEN 446
           G E+AV+ I  +  N    +    E+  +  L H ++V L    + EK +L LV +Y   
Sbjct: 39  GKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEK-TLYLVMEYASG 97
Query: 447 GSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMN 506
           G +  ++       M   E R +  + + + V Y H+ +   ++HRD+K+ N+LLD +MN
Sbjct: 98  GEVFDYLVA--HGRMKEKEARAK-FRQIVSAVQYCHQKF---IVHRDLKAENLLLDADMN 151
Query: 507 GRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRAS-TQTDVFGFGILILEVLSG 565
            ++ DFG +     G    T    G+  Y APE+F   +    + DV+  G+++  ++SG
Sbjct: 152 IKIADFGFSNEFTFGNKLDT--FCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG 209
Query: 566 RRPIEEGKPNLVEMVWELMVQGK 588
             P +    NL E+  E +++GK
Sbjct: 210 SLPFD--GQNLKEL-RERVLRGK 229

>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An Aminoisoquinoline Inhibitor Length = 300

Iteration: 1
 Score = 71.6 bits (174), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 50/170 (29%), Positives = 90/170 (52%), Gaps = 17/170 (10%)
Query: 406 RAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCE 465
           +AF  E+  L + +H +++   G+    K  L +V  + E  SL   +   +    +   
Sbjct: 69  QAFKNEVGVLRKTRHVNILLFMGYS--TKPQLAIVTQWCEGSSLYHHLHIIETKFEMI-- 124
Query: 466 ERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLA----RMHGHG 521
           + I + +  A G+ YLH    K ++HRD+KS+N+ L +++  ++GDFGLA    R  G  
Sbjct: 125 KLIDIARQTAQGMDYLHA---KSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSH 181
Query: 522 QVASTTRVVGTVGYLAPEVF---SSGRASTQTDVFGFGILILEVLSGRRP 568
           Q    +   G++ ++APEV         S Q+DV+ FGI++ E+++G+ P
Sbjct: 182 QFEQLS---GSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 228

>pdb|3ZVX|A Chain A, Structure Of The Lectin From Platypodium Elegans In Complex With A Trimannoside Length = 261

Iteration: 1
 Score = 71.6 bits (174), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 75/265 (28%), Positives = 115/265 (43%), Gaps = 42/265 (15%)
Query: 25  AVDFVFNGFNSS--NLSLYGTA-TVESRILTLTNSTT------FTIGRALYPSKIPTKRP 75
           ++ F F  F+    NL   G A T  + IL LT + +       T+GR L+ +++     
Sbjct: 11  SLSFSFINFDRDERNLIFQGDAHTSRNNILQLTRTDSNGAPVRSTVGRILHSAQVRLWEK 70
Query: 76  NSSYVYPFSTSFIFAMAPYKGVLAGHGLVFLFVPFHGIKGATEAQHLGLFN-RTNDGNSS 134
           +++ V    T F F ++      A     F+  P   I   +    LGLFN RT    S+
Sbjct: 71  STNRVANLQTQFSFFLSSPLSNPADGIAFFIAPPDTTIPSGSAGGLLGLFNPRTALNESA 130
Query: 135 NHVFGVEFDVFKNQEFNDIDEN--HVGIDVNSLTSVSAHAAGYWPDNQXXXXXXXXXXXX 192
           N V  VEFD F  Q  N  D N  H+GIDVNS+ S                         
Sbjct: 131 NQVLAVEFDTFFAQNSNTWDPNYQHIGIDVNSIRS------------------------- 165
Query: 193 XXXEKSFKELKLNNGKNYQVWIDYADSFINITMVEAGMKRPKRPLLSVPLNLSGVLEDEM 252
                     +   GK   V + Y  S   I +V A     +R  LS  ++L+ +L + +
Sbjct: 166 ----SKVVRWERREGKTLNVLVTYNPSTRTIDVV-ATYPDGQRYQLSHVVDLTTILPEWV 220
Query: 253 YVGFTAATGQLVESHKILAWSFSNT 277
            VGF+AA+G+  ++H + +WSF++T
Sbjct: 221 RVGFSAASGEQFQTHNLESWSFTST 245

>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP Length = 311

Iteration: 1
 Score = 71.6 bits (174), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 47/174 (27%), Positives = 81/174 (46%), Gaps = 9/174 (5%)
Query: 408 FLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYME--NGSLDKWIFQCDGSMMLSCE 465
           F  E  +   L H ++V +    + E  +  L Y  ME  +G   + I   +G M  + +
Sbjct: 59  FRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPM--TPK 116
Query: 466 ERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARM--HGHGQV 523
             I V+ D    + + H+     ++HRD+K +N+++      ++ DFG+AR        V
Sbjct: 117 RAIEVIADACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSV 173
Query: 524 ASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLV 577
             T  V+GT  YL+PE         ++DV+  G ++ EVL+G  P     P+ V
Sbjct: 174 TQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPDSV 227

>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine Inhibitor Length = 306

Iteration: 1
 Score = 71.2 bits (173), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 52/172 (30%), Positives = 91/172 (52%), Gaps = 21/172 (12%)
Query: 406 RAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSL--DKWIFQCDGSMMLS 463
           +AF  E+  L + +H +++   G+    K  L +V  + E  SL     I +    M+  
Sbjct: 76  QAFKNEVGVLRKTRHVNILLFMGYS--TKPQLAIVTQWCEGSSLYHHLHIIETKFEMI-- 131
Query: 464 CEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLA----RMHG 519
             + I + +  A G+ YLH    K ++HRD+KS+N+ L +++  ++GDFGLA    R  G
Sbjct: 132 --KLIDIARQTAQGMDYLHA---KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSG 186
Query: 520 HGQVASTTRVVGTVGYLAPEVF---SSGRASTQTDVFGFGILILEVLSGRRP 568
             Q    +   G++ ++APEV         S Q+DV+ FGI++ E+++G+ P
Sbjct: 187 SHQFEQLS---GSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 235

>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound Length = 279

Iteration: 1
 Score = 71.2 bits (173), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 51/167 (30%), Positives = 84/167 (50%), Gaps = 5/167 (2%)
Query: 406 RAFLAEISSLGRLKHKSLVGLRGWC-KREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSC 464
           +  ++E++ L  LKH ++V        R   +L +V +Y E G L   I +         
Sbjct: 50  QMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLD 109
Query: 465 EERI-RVLKDVAAGVLYLHEGWE--KKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHG 521
           EE + RV+  +   +   H   +    VLHRD+K +NV LD + N +LGDFGLAR+  H 
Sbjct: 110 EEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHD 169
Query: 522 QVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRP 568
              + T  VGT  Y++PE  +    + ++D++  G L+ E+ +   P
Sbjct: 170 TSFAKT-FVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPP 215

>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase Length = 307

Iteration: 1
 Score = 71.2 bits (173), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 52/172 (30%), Positives = 91/172 (52%), Gaps = 21/172 (12%)
Query: 406 RAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSL--DKWIFQCDGSMMLS 463
           +AF  E+  L + +H +++   G+    K  L +V  + E  SL     I +    M+  
Sbjct: 77  QAFKNEVGVLRKTRHVNILLFMGYS--TKPQLAIVTQWCEGSSLYHHLHIIETKFEMI-- 132
Query: 464 CEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLA----RMHG 519
             + I + +  A G+ YLH    K ++HRD+KS+N+ L +++  ++GDFGLA    R  G
Sbjct: 133 --KLIDIARQTAQGMDYLHA---KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSG 187
Query: 520 HGQVASTTRVVGTVGYLAPEVF---SSGRASTQTDVFGFGILILEVLSGRRP 568
             Q    +   G++ ++APEV         S Q+DV+ FGI++ E+++G+ P
Sbjct: 188 SHQFEQLS---GSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 236

>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii Dihydroquinazoline Inhibitor Length = 307

Iteration: 1
 Score = 71.2 bits (173), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 52/172 (30%), Positives = 91/172 (52%), Gaps = 21/172 (12%)
Query: 406 RAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSL--DKWIFQCDGSMMLS 463
           +AF  E+  L + +H +++   G+    K  L +V  + E  SL     I +    M+  
Sbjct: 77  QAFKNEVGVLRKTRHVNILLFMGYS--TKPQLAIVTQWCEGSSLYHHLHIIETKFEMI-- 132
Query: 464 CEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLA----RMHG 519
             + I + +  A G+ YLH    K ++HRD+KS+N+ L +++  ++GDFGLA    R  G
Sbjct: 133 --KLIDIARQTAQGMDYLHA---KSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSG 187
Query: 520 HGQVASTTRVVGTVGYLAPEVF---SSGRASTQTDVFGFGILILEVLSGRRP 568
             Q    +   G++ ++APEV         S Q+DV+ FGI++ E+++G+ P
Sbjct: 188 SHQFEQLS---GSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 236

>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine Kinase Length = 537

Iteration: 1
 Score = 71.2 bits (173), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 61/261 (23%), Positives = 121/261 (46%), Gaps = 24/261 (9%)
Query: 392 IAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDK 451
           +AVK +  E+      FL E + +  +KH +LV L G C RE     ++ ++M  G+L  
Sbjct: 287 VAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREP-PFYIITEFMTYGNLLD 344
Query: 452 WIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGD 511
           ++ +C+    ++    + +   +++ + YL +   K  +HR++ + N L+ +    ++ D
Sbjct: 345 YLRECN-RQEVNAVVLLYMATQISSAMEYLEK---KNFIHRNLAARNCLVGENHLVKVAD 400
Query: 512 FGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLS-GRRPIE 570
           FGL+R+       +       + + APE  +  + S ++DV+ FG+L+ E+ + G  P  
Sbjct: 401 FGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY- 459
Query: 571 EGKPNL-VEMVWELMVQGKXXXXXXXXXXXKGGFDEDEVERVLHLGLLCAYPDPRARPTM 629
              P + +  V+EL+ +                  E   E+V  L   C   +P  RP+ 
Sbjct: 460 ---PGIDLSQVYELLEKDYRMER-----------PEGCPEKVYELMRACWQWNPSDRPSF 505
Query: 630 RQVVKVLEGKI-EAGIENETE 649
            ++ +  E    E+ I +E E
Sbjct: 506 AEIHQAFETMFQESSISDEVE 526

>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In Complex With Dcc- 2036 Length = 277

Iteration: 1
 Score = 71.2 bits (173), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 63/249 (25%), Positives = 114/249 (45%), Gaps = 25/249 (10%)
Query: 392 IAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDK 451
           +AVK +  E+      FL E + +  +KH +LV L G C RE     ++ ++M  G+L  
Sbjct: 46  VAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREP-PFYIITEFMTYGNLLD 103
Query: 452 WIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKK-VLHRDIKSSNVLLDKEMNGRLG 510
           ++ +C+       E    VL  +A  +    E  EKK  +HRD+ + N L+ +    ++ 
Sbjct: 104 YLRECNRQ-----EVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVA 158
Query: 511 DFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLS-GRRPI 569
           DFGL+R+       +       + + APE  +  + S ++DV+ FG+L+ E+ + G  P 
Sbjct: 159 DFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 218
Query: 570 EEGKPNL-VEMVWELMVQGKXXXXXXXXXXXKGGFDEDEVERVLHLGLLCAYPDPRARPT 628
               P + +  V+EL+ +             +    E   E+V  L   C   +P  RP+
Sbjct: 219 ----PGIDLSQVYELLEKD-----------YRMERPEGCPEKVYELMRACWQWNPSDRPS 263
Query: 629 MRQVVKVLE 637
             ++ +  E
Sbjct: 264 FAEIHQAFE 272

>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i Mutant In Complex With Dcc-2036 Length = 277

Iteration: 1
 Score = 71.2 bits (173), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 63/249 (25%), Positives = 114/249 (45%), Gaps = 25/249 (10%)
Query: 392 IAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDK 451
           +AVK +  E+      FL E + +  +KH +LV L G C RE     ++ ++M  G+L  
Sbjct: 46  VAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREP-PFYIIIEFMTYGNLLD 103
Query: 452 WIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKK-VLHRDIKSSNVLLDKEMNGRLG 510
           ++ +C+       E    VL  +A  +    E  EKK  +HRD+ + N L+ +    ++ 
Sbjct: 104 YLRECNRQ-----EVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVA 158
Query: 511 DFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLS-GRRPI 569
           DFGL+R+       +       + + APE  +  + S ++DV+ FG+L+ E+ + G  P 
Sbjct: 159 DFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 218
Query: 570 EEGKPNL-VEMVWELMVQGKXXXXXXXXXXXKGGFDEDEVERVLHLGLLCAYPDPRARPT 628
               P + +  V+EL+ +             +    E   E+V  L   C   +P  RP+
Sbjct: 219 ----PGIDLSQVYELLEKD-----------YRMERPEGCPEKVYELMRACWQWNPSDRPS 263
Query: 629 MRQVVKVLE 637
             ++ +  E
Sbjct: 264 FAEIHQAFE 272

>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex Length = 438

Iteration: 1
 Score = 71.2 bits (173), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 46/163 (28%), Positives = 87/163 (53%), Gaps = 17/163 (10%)
Query: 407 AFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEE 466
           AFLAE + +  L+H  LV L     +E   + ++ ++M  GSL  ++   +GS      +
Sbjct: 223 AFLAEANVMKTLQHDKLVKLHAVVTKE--PIYIITEFMAKGSLLDFLKSDEGSKQ-PLPK 279
Query: 467 RIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVAST 526
            I     +A G+ ++ +   +  +HRD++++N+L+   +  ++ DFGLAR+     +  T
Sbjct: 280 LIDFSAQIAEGMAFIEQ---RNYIHRDLRAANILVSASLVCKIADFGLARVGAKFPIKWT 336
Query: 527 TRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLS-GRRP 568
                     APE  + G  + ++DV+ FGIL++E+++ GR P
Sbjct: 337 ----------APEAINFGSFTIKSDVWSFGILLMEIVTYGRIP 369

>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006 Length = 276

Iteration: 1
 Score = 70.9 bits (172), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 54/189 (28%), Positives = 98/189 (51%), Gaps = 23/189 (12%)
Query: 391 EIAVK--RISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGS 448
           ++AVK   ++       +AF  E+  L + +H +++   G+    +  L +V  + E  S
Sbjct: 32  DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTAPQ--LAIVTQWCEGSS 89
Query: 449 L--DKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMN 506
           L     I +    M+    + I + +  A G+ YLH    K ++HRD+KS+N+ L +++ 
Sbjct: 90  LYHHLHIIETKFEMI----KLIDIARQTAQGMDYLHA---KSIIHRDLKSNNIFLHEDLT 142
Query: 507 GRLGDFGLA----RMHGHGQVASTTRVVGTVGYLAPEVF---SSGRASTQTDVFGFGILI 559
            ++GDFGLA    R  G  Q    +   G++ ++APEV         S Q+DV+ FGI++
Sbjct: 143 VKIGDFGLATVKSRWSGSHQFEQLS---GSILWMAPEVIRMQDKNPYSFQSDVYAFGIVL 199
Query: 560 LEVLSGRRP 568
            E+++G+ P
Sbjct: 200 YELMTGQLP 208

>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571, Glivec) Length = 273

Iteration: 1
 Score = 70.9 bits (172), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 63/249 (25%), Positives = 114/249 (45%), Gaps = 25/249 (10%)
Query: 392 IAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDK 451
           +AVK +  E+      FL E + +  +KH +LV L G C RE     ++ ++M  G+L  
Sbjct: 41  VAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREP-PFYIITEFMTYGNLLD 98
Query: 452 WIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKK-VLHRDIKSSNVLLDKEMNGRLG 510
           ++ +C+       E    VL  +A  +    E  EKK  +HRD+ + N L+ +    ++ 
Sbjct: 99  YLRECNRQ-----EVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVA 153
Query: 511 DFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLS-GRRPI 569
           DFGL+R+       +       + + APE  +  + S ++DV+ FG+L+ E+ + G  P 
Sbjct: 154 DFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 213
Query: 570 EEGKPNL-VEMVWELMVQGKXXXXXXXXXXXKGGFDEDEVERVLHLGLLCAYPDPRARPT 628
               P + +  V+EL+ +             +    E   E+V  L   C   +P  RP+
Sbjct: 214 ----PGIDLSQVYELLEKD-----------YRMERPEGCPEKVYELMRACWQWNPSDRPS 258
Query: 629 MRQVVKVLE 637
             ++ +  E
Sbjct: 259 FAEIHQAFE 267

>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1 Length = 328

Iteration: 1
 Score = 70.9 bits (172), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 58/203 (28%), Positives = 101/203 (49%), Gaps = 15/203 (7%)
Query: 389 GAEIAVKRI--SHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMEN 446
           G E+AVK I  +  N    +    E+  +  L H ++V L    + EK +L LV +Y   
Sbjct: 40  GREVAVKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEK-TLYLVMEYASG 98
Query: 447 GSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMN 506
           G +  ++       M   E R +  + + + V Y H+ +   ++HRD+K+ N+LLD +MN
Sbjct: 99  GEVFDYLVA--HGRMKEKEARAK-FRQIVSAVQYCHQKY---IVHRDLKAENLLLDGDMN 152
Query: 507 GRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRAS-TQTDVFGFGILILEVLSG 565
            ++ DFG +     G    T    G+  Y APE+F   +    + DV+  G+++  ++SG
Sbjct: 153 IKIADFGFSNEFTVGNKLDT--FCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG 210
Query: 566 RRPIEEGKPNLVEMVWELMVQGK 588
             P +    NL E+  E +++GK
Sbjct: 211 SLPFD--GQNLKEL-RERVLRGK 230

>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To Activated Abl Kinase Domain Length = 278

Iteration: 1
 Score = 70.9 bits (172), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 63/249 (25%), Positives = 114/249 (45%), Gaps = 25/249 (10%)
Query: 392 IAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDK 451
           +AVK +  E+      FL E + +  +KH +LV L G C RE     ++ ++M  G+L  
Sbjct: 46  VAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREP-PFYIITEFMTYGNLLD 103
Query: 452 WIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKK-VLHRDIKSSNVLLDKEMNGRLG 510
           ++ +C+       E    VL  +A  +    E  EKK  +HRD+ + N L+ +    ++ 
Sbjct: 104 YLRECNRQ-----EVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVA 158
Query: 511 DFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLS-GRRPI 569
           DFGL+R+       +       + + APE  +  + S ++DV+ FG+L+ E+ + G  P 
Sbjct: 159 DFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 218
Query: 570 EEGKPNL-VEMVWELMVQGKXXXXXXXXXXXKGGFDEDEVERVLHLGLLCAYPDPRARPT 628
               P + +  V+EL+ +             +    E   E+V  L   C   +P  RP+
Sbjct: 219 ----PGIDLSQVYELLEKD-----------YRMERPEGCPEKVYELMRACWQWNPSDRPS 263
Query: 629 MRQVVKVLE 637
             ++ +  E
Sbjct: 264 FAEIHQAFE 272

>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In Complex With Substrates Length = 326

Iteration: 1
 Score = 70.9 bits (172), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 73/282 (25%), Positives = 129/282 (45%), Gaps = 35/282 (12%)
Query: 391 EIAVKRI-SHENDGGTRAFLAEISSLGRL-KHKSLVGLRGWCKREKGSLMLVYDYMENGS 448
           ++AVK + S   +      ++E+  +  + KHK+++ L G C ++ G L ++ +Y   G+
Sbjct: 62  KVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQD-GPLYVIVEYASKGN 120
Query: 449 LDKWI---------FQCDGSM----MLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIK 495
           L +++         F  + S      LS ++ +     VA G+ YL     KK +HRD+ 
Sbjct: 121 LREYLQARRPPGLEFSFNPSHNPEEQLSSKDLVSCAYQVARGMEYLAS---KKCIHRDLA 177
Query: 496 SSNVLLDKEMNGRLGDFGLAR-MHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFG 554
           + NVL+ ++   ++ DFGLAR +H       TT     V ++APE       + Q+DV+ 
Sbjct: 178 ARNVLVTEDNVMKIADFGLARDIHHIDXXKKTTNGRLPVKWMAPEALFDRIYTHQSDVWS 237
Query: 555 FGILILEVLS-GRRPIEEGKPNLVEMVWELMVQGKXXXXXXXXXXXKGGFDEDEVERVLH 613
           FG+L+ E+ + G  P   G P  VE +++L+ +G                  D       
Sbjct: 238 FGVLLWEIFTLGGSPY-PGVP--VEELFKLLKEGHRMDKPSNCTNELYMMMRD------- 287
Query: 614 LGLLCAYPDPRARPTMRQVVKVLEGKIEAGIENETEDMDAYL 655
               C +  P  RPT +Q+V+ L+  +      E  D+   L
Sbjct: 288 ----CWHAVPSQRPTFKQLVEDLDRIVALTSNQEXLDLSMPL 325

>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082 Length = 270

Iteration: 1
 Score = 70.9 bits (172), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 63/249 (25%), Positives = 114/249 (45%), Gaps = 25/249 (10%)
Query: 392 IAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDK 451
           +AVK +  E+      FL E + +  +KH +LV L G C RE     ++ ++M  G+L  
Sbjct: 41  VAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREP-PFYIITEFMTYGNLLD 98
Query: 452 WIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKK-VLHRDIKSSNVLLDKEMNGRLG 510
           ++ +C+       E    VL  +A  +    E  EKK  +HRD+ + N L+ +    ++ 
Sbjct: 99  YLRECNRQ-----EVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVA 153
Query: 511 DFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLS-GRRPI 569
           DFGL+R+       +       + + APE  +  + S ++DV+ FG+L+ E+ + G  P 
Sbjct: 154 DFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 213
Query: 570 EEGKPNL-VEMVWELMVQGKXXXXXXXXXXXKGGFDEDEVERVLHLGLLCAYPDPRARPT 628
               P + +  V+EL+ +             +    E   E+V  L   C   +P  RP+
Sbjct: 214 ----PGIDLSQVYELLEKD-----------YRMERPEGCPEKVYELMRACWQWNPSDRPS 258
Query: 629 MRQVVKVLE 637
             ++ +  E
Sbjct: 259 FAEIHQAFE 267

>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant Length = 311

Iteration: 1
 Score = 70.9 bits (172), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 46/171 (26%), Positives = 79/171 (46%), Gaps = 9/171 (5%)
Query: 408 FLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYME--NGSLDKWIFQCDGSMMLSCE 465
           F  E  +   L H ++V +    + E  +  L Y  ME  +G   + I   +G M  + +
Sbjct: 59  FRREAQNAAALNHPAIVAVYATGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPM--TPK 116
Query: 466 ERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHG--QV 523
             I V+ D    + + H+     ++HRD+K +N+++      ++ DFG+AR        V
Sbjct: 117 RAIEVIADACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSV 173
Query: 524 ASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKP 574
             T  V+GT  YL+PE         ++DV+  G ++ EVL+G  P     P
Sbjct: 174 TQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSP 224

>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb Mutant Kinase Domain In Complex With Kt5720 Length = 311

Iteration: 1
 Score = 70.9 bits (172), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 47/171 (27%), Positives = 79/171 (46%), Gaps = 9/171 (5%)
Query: 408 FLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYME--NGSLDKWIFQCDGSMMLSCE 465
           F  E  +   L H ++V +    + E  +  L Y  ME  +G   + I   +G M  + +
Sbjct: 59  FRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPM--TPK 116
Query: 466 ERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHG--QV 523
             I V+ D    + + H+     ++HRD+K +N+L+      ++ DFG+AR        V
Sbjct: 117 RAIEVIADACQALNFSHQNG---IIHRDVKPANILISATNAVKVVDFGIARAIADSGNSV 173
Query: 524 ASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKP 574
             T  V+GT  YL+PE         ++DV+  G ++ EVL+G  P     P
Sbjct: 174 XQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSP 224

>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970 Length = 277

Iteration: 1
 Score = 70.9 bits (172), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 63/249 (25%), Positives = 114/249 (45%), Gaps = 25/249 (10%)
Query: 392 IAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDK 451
           +AVK +  E+      FL E + +  +KH +LV L G C RE     ++ ++M  G+L  
Sbjct: 45  VAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREP-PFYIITEFMTYGNLLD 102
Query: 452 WIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKK-VLHRDIKSSNVLLDKEMNGRLG 510
           ++ +C+       E    VL  +A  +    E  EKK  +HRD+ + N L+ +    ++ 
Sbjct: 103 YLRECNRQ-----EVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVA 157
Query: 511 DFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLS-GRRPI 569
           DFGL+R+       +       + + APE  +  + S ++DV+ FG+L+ E+ + G  P 
Sbjct: 158 DFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 217
Query: 570 EEGKPNL-VEMVWELMVQGKXXXXXXXXXXXKGGFDEDEVERVLHLGLLCAYPDPRARPT 628
               P + +  V+EL+ +             +    E   E+V  L   C   +P  RP+
Sbjct: 218 ----PGIDLSQVYELLEKD-----------YRMERPEGCPEKVYELMRACWQWNPSDRPS 262
Query: 629 MRQVVKVLE 637
             ++ +  E
Sbjct: 263 FAEIHQAFE 271

>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase Domain With 3-(2,6-Dichloro-3, 5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1- Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398) Length = 382

Iteration: 1
 Score = 70.9 bits (172), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 68/264 (25%), Positives = 127/264 (48%), Gaps = 33/264 (12%)
Query: 390 AEIAVKRI-SHENDGGTRAFLAEISSLGRL-KHKSLVGLRGWCKREKGSLMLVYDYMENG 447
            ++AVK + S   +      ++E+  +  + KHK+++ L G C ++ G L ++ +Y   G
Sbjct: 102 TKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQD-GPLYVIVEYASKG 160
Query: 448 SLDKWI---------FQCDGSM----MLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDI 494
           +L +++         +  + S      LS ++ +     VA G+ YL     KK +HRD+
Sbjct: 161 NLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLAS---KKCIHRDL 217
Query: 495 KSSNVLLDKEMNGRLGDFGLAR-MHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVF 553
            + NVL+ ++   ++ DFGLAR +H       TT     V ++APE       + Q+DV+
Sbjct: 218 AARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVW 277
Query: 554 GFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKXXXXXXXXXXXKGGFDEDEVERVLH 613
            FG+L+ E+ +       G P  VE +++L+ +G            K     +E+  ++ 
Sbjct: 278 SFGVLLWEIFTLGGSPYPGVP--VEELFKLLKEGH--------RMDKPSNCTNELYMMMR 327
Query: 614 LGLLCAYPDPRARPTMRQVVKVLE 637
               C +  P  RPT +Q+V+ L+
Sbjct: 328 ---DCWHAVPSQRPTFKQLVEDLD 348

>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase I 1-315 In Complex With Atp Length = 315

Iteration: 1
 Score = 70.5 bits (171), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 58/194 (29%), Positives = 93/194 (47%), Gaps = 14/194 (7%)
Query: 392 IAVKRISHEN-DGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLD 450
           +A+K I+ E  +G   +   EI+ L ++KH ++V L        G L L+   +  G L 
Sbjct: 46  VAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALDD-IYESGGHLYLIMQLVSGGELF 104
Query: 451 KWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVL---LDKEMNG 507
             I +       +  +  R++  V   V YLH+     ++HRD+K  N+L   LD++   
Sbjct: 105 DRIVE---KGFYTERDASRLIFQVLDAVKYLHD---LGIVHRDLKPENLLYYSLDEDSKI 158
Query: 508 RLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRR 567
            + DFGL++M   G V ST    GT GY+APEV +    S   D +  G++   +L G  
Sbjct: 159 MISDFGLSKMEDPGSVLSTA--CGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYP 216
Query: 568 PI-EEGKPNLVEMV 580
           P  +E    L E +
Sbjct: 217 PFYDENDAKLFEQI 230

>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase I 1-293 In Complex With Atp Length = 293

Iteration: 1
 Score = 70.5 bits (171), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 58/194 (29%), Positives = 93/194 (47%), Gaps = 14/194 (7%)
Query: 392 IAVKRISHEN-DGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLD 450
           +A+K I+ E  +G   +   EI+ L ++KH ++V L        G L L+   +  G L 
Sbjct: 46  VAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALDD-IYESGGHLYLIMQLVSGGELF 104
Query: 451 KWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVL---LDKEMNG 507
             I +       +  +  R++  V   V YLH+     ++HRD+K  N+L   LD++   
Sbjct: 105 DRIVE---KGFYTERDASRLIFQVLDAVKYLHD---LGIVHRDLKPENLLYYSLDEDSKI 158
Query: 508 RLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRR 567
            + DFGL++M   G V ST    GT GY+APEV +    S   D +  G++   +L G  
Sbjct: 159 MISDFGLSKMEDPGSVLSTA--CGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYP 216
Query: 568 PI-EEGKPNLVEMV 580
           P  +E    L E +
Sbjct: 217 PFYDENDAKLFEQI 230

>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase I 1-320 In Complex With Atp Length = 320

Iteration: 1
 Score = 70.5 bits (171), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 58/194 (29%), Positives = 93/194 (47%), Gaps = 14/194 (7%)
Query: 392 IAVKRISHEN-DGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLD 450
           +A+K I+ E  +G   +   EI+ L ++KH ++V L        G L L+   +  G L 
Sbjct: 46  VAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALDD-IYESGGHLYLIMQLVSGGELF 104
Query: 451 KWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVL---LDKEMNG 507
             I +       +  +  R++  V   V YLH+     ++HRD+K  N+L   LD++   
Sbjct: 105 DRIVE---KGFYTERDASRLIFQVLDAVKYLHD---LGIVHRDLKPENLLYYSLDEDSKI 158
Query: 508 RLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRR 567
            + DFGL++M   G V ST    GT GY+APEV +    S   D +  G++   +L G  
Sbjct: 159 MISDFGLSKMEDPGSVLSTA--CGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYP 216
Query: 568 PI-EEGKPNLVEMV 580
           P  +E    L E +
Sbjct: 217 PFYDENDAKLFEQI 230

>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: T208aS212A INACTIVE DOUBLE MUTANT Length = 327

Iteration: 1
 Score = 70.1 bits (170), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 57/203 (28%), Positives = 99/203 (48%), Gaps = 15/203 (7%)
Query: 389 GAEIAVKRI--SHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMEN 446
           G E+AVK I  +  N    +    E+  +  L H ++V L    + EK +L LV +Y   
Sbjct: 39  GKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEK-TLYLVMEYASG 97
Query: 447 GSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMN 506
           G +  ++       M   E R +  + + + V Y H+ +   ++HRD+K+ N+LLD +MN
Sbjct: 98  GEVFDYLVA--HGRMKEKEARAK-FRQIVSAVQYCHQKF---IVHRDLKAENLLLDADMN 151
Query: 507 GRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRAS-TQTDVFGFGILILEVLSG 565
            ++ DFG +     G         G   Y APE+F   +    + DV+  G+++  ++SG
Sbjct: 152 IKIADFGFSNEFTFGNKLDA--FCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG 209
Query: 566 RRPIEEGKPNLVEMVWELMVQGK 588
             P +    NL E+  E +++GK
Sbjct: 210 SLPFD--GQNLKEL-RERVLRGK 229

>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30 Length = 302

Iteration: 1
 Score = 70.1 bits (170), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 48/180 (26%), Positives = 96/180 (53%), Gaps = 9/180 (5%)
Query: 389 GAEIAVKRISHENDGGTRAFLA-EISSLGRLKHKSLVGLRGWCKREKGS-LMLVYDYMEN 446
           G ++AVK +  E+ G   A L  EI  L  L H+++V  +G C  + G+ + L+ +++ +
Sbjct: 50  GEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPS 109
Query: 447 GSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMN 506
           GSL +++ +    + L  +++++    +  G+ YL     ++ +HRD+ + NVL++ E  
Sbjct: 110 GSLKEYLPKNKNKINL--KQQLKYAVQICKGMDYL---GSRQYVHRDLAARNVLVESEHQ 164
Query: 507 GRLGDFGLARMHGHGQVASTTR--VVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLS 564
            ++GDFGL +     +   T +      V + APE     +    +DV+ FG+ + E+L+
Sbjct: 165 VKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLT 224

>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole Inhibitor Length = 291

Iteration: 1
 Score = 70.1 bits (170), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 69/265 (26%), Positives = 116/265 (43%), Gaps = 20/265 (7%)
Query: 386 EGGGAEIAVKRISHENDGGTRA-FLAEISSLGRLKHKSLVGLRGWCKRE-KGSLMLVYDY 443
           +G G  +AVK +        R+ +  EI  L  L H+ +V  +G C+ + + S+ LV +Y
Sbjct: 35  DGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEY 94
Query: 444 MENGSLDKWI-FQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLD 502
           +  GSL  ++   C G   L     +   + +  G+ YLH    +  +HR + + NVLLD
Sbjct: 95  VPLGSLRDYLPRHCVGLAQL-----LLFAQQICEGMAYLHA---QHYIHRALAARNVLLD 146
Query: 503 KEMNGRLGDFGLARMHGHGQVASTTRVVG--TVGYLAPEVFSSGRASTQTDVFGFGILIL 560
            +   ++GDFGLA+    G      R  G   V + APE     +    +DV+ FG+ + 
Sbjct: 147 NDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKECKFYYASDVWSFGVTLY 206
Query: 561 EVLSGRRPIEEGKPNLVEMVWELMVQGKXXXXXXXXXXXKGGF----DEDEVERVLHLGL 616
           E+L+     +       E++     QG+           +G      D    E + HL  
Sbjct: 207 ELLTYCDSNQSPHTKFTELIGH--TQGQMTVLRLTELLERGERLPRPDRCPCE-IYHLMK 263
Query: 617 LCAYPDPRARPTMRQVVKVLEGKIE 641
            C   +   RPT + +V +L+   E
Sbjct: 264 NCWETEASFRPTFQNLVPILQTAQE 288

>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein Kinase 1d Length = 334

Iteration: 1
 Score = 70.1 bits (170), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 59/200 (29%), Positives = 93/200 (46%), Gaps = 14/200 (7%)
Query: 386 EGGGAEIAVKRISHENDGGTRAFLA-EISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYM 444
           +  G   AVK I  +   G  + +  EI+ L ++KH+++V L          L LV   +
Sbjct: 44  KATGKLFAVKCIPKKALKGKESSIENEIAVLRKIKHENIVALED-IYESPNHLYLVMQLV 102
Query: 445 ENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLL--- 501
             G L   I +       + ++   +++ V   V YLH      ++HRD+K  N+L    
Sbjct: 103 SGGELFDRIVE---KGFYTEKDASTLIRQVLDAVYYLHR---MGIVHRDLKPENLLYYSQ 156
Query: 502 DKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILE 561
           D+E    + DFGL++M G G V ST    GT GY+APEV +    S   D +  G++   
Sbjct: 157 DEESKIMISDFGLSKMEGKGDVMSTA--CGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYI 214
Query: 562 VLSGRRPI-EEGKPNLVEMV 580
           +L G  P  +E    L E +
Sbjct: 215 LLCGYPPFYDENDSKLFEQI 234

>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes Length = 290

Iteration: 1
 Score = 70.1 bits (170), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 48/180 (26%), Positives = 96/180 (53%), Gaps = 9/180 (5%)
Query: 389 GAEIAVKRISHENDGGTRAFLA-EISSLGRLKHKSLVGLRGWCKREKGS-LMLVYDYMEN 446
           G ++AVK +  E+ G   A L  EI  L  L H+++V  +G C  + G+ + L+ +++ +
Sbjct: 38  GEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPS 97
Query: 447 GSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMN 506
           GSL +++ +    + L  +++++    +  G+ YL     ++ +HRD+ + NVL++ E  
Sbjct: 98  GSLKEYLPKNKNKINL--KQQLKYAVQICKGMDYL---GSRQYVHRDLAARNVLVESEHQ 152
Query: 507 GRLGDFGLARMHGHGQVASTTR--VVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLS 564
            ++GDFGL +     +   T +      V + APE     +    +DV+ FG+ + E+L+
Sbjct: 153 VKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLT 212

>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole Inhibitor Length = 290

Iteration: 1
 Score = 70.1 bits (170), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 69/265 (26%), Positives = 116/265 (43%), Gaps = 20/265 (7%)
Query: 386 EGGGAEIAVKRISHENDGGTRA-FLAEISSLGRLKHKSLVGLRGWCKRE-KGSLMLVYDY 443
           +G G  +AVK +        R+ +  EI  L  L H+ +V  +G C+ + + S+ LV +Y
Sbjct: 34  DGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEY 93
Query: 444 MENGSLDKWI-FQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLD 502
           +  GSL  ++   C G   L     +   + +  G+ YLH    +  +HR + + NVLLD
Sbjct: 94  VPLGSLRDYLPRHCVGLAQL-----LLFAQQICEGMAYLHA---QHYIHRALAARNVLLD 145
Query: 503 KEMNGRLGDFGLARMHGHGQVASTTRVVG--TVGYLAPEVFSSGRASTQTDVFGFGILIL 560
            +   ++GDFGLA+    G      R  G   V + APE     +    +DV+ FG+ + 
Sbjct: 146 NDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKECKFYYASDVWSFGVTLY 205
Query: 561 EVLSGRRPIEEGKPNLVEMVWELMVQGKXXXXXXXXXXXKGGF----DEDEVERVLHLGL 616
           E+L+     +       E++     QG+           +G      D    E + HL  
Sbjct: 206 ELLTYCDSNQSPHTKFTELIGH--TQGQMTVLRLTELLERGERLPRPDRCPCE-IYHLMK 262
Query: 617 LCAYPDPRARPTMRQVVKVLEGKIE 641
            C   +   RPT + +V +L+   E
Sbjct: 263 NCWETEASFRPTFQNLVPILQTAQE 287

>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r, T208e Double Mutant Length = 327

Iteration: 1
 Score = 70.1 bits (170), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 56/203 (27%), Positives = 100/203 (49%), Gaps = 15/203 (7%)
Query: 389 GAEIAVKRI--SHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMEN 446
           G E+AV+ I  +  N    +    E+  +  L H ++V L    + EK +L LV +Y   
Sbjct: 39  GKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEK-TLYLVMEYASG 97
Query: 447 GSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMN 506
           G +  ++       M   E R +  + + + V Y H+ +   ++HRD+K+ N+LLD +MN
Sbjct: 98  GEVFDYLVA--HGRMKEKEARAK-FRQIVSAVQYCHQKF---IVHRDLKAENLLLDADMN 151
Query: 507 GRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRAS-TQTDVFGFGILILEVLSG 565
            ++ DFG +     G         G+  Y APE+F   +    + DV+  G+++  ++SG
Sbjct: 152 IKIADFGFSNEFTFGN--KLDEFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG 209
Query: 566 RRPIEEGKPNLVEMVWELMVQGK 588
             P +    NL E+  E +++GK
Sbjct: 210 SLPFD--GQNLKEL-RERVLRGK 229

>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF Mycobacterium Tuberculosis Pknb. Length = 311

Iteration: 1
 Score = 70.1 bits (170), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 46/171 (26%), Positives = 79/171 (46%), Gaps = 9/171 (5%)
Query: 408 FLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYME--NGSLDKWIFQCDGSMMLSCE 465
           F  E  +   L H ++V +    + E  +  L Y  ME  +G   + I   +G M  + +
Sbjct: 59  FRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPM--TPK 116
Query: 466 ERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHG--QV 523
             I V+ D    + + H+     ++HRD+K +N+++      ++ DFG+AR        V
Sbjct: 117 RAIEVIADACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSV 173
Query: 524 ASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKP 574
             T  V+GT  YL+PE         ++DV+  G ++ EVL+G  P     P
Sbjct: 174 TQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSP 224

>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant (Crystal Form 1) Length = 311

Iteration: 1
 Score = 70.1 bits (170), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 46/171 (26%), Positives = 79/171 (46%), Gaps = 9/171 (5%)
Query: 408 FLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYME--NGSLDKWIFQCDGSMMLSCE 465
           F  E  +   L H ++V +    + E  +  L Y  ME  +G   + I   +G M  + +
Sbjct: 59  FRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPM--TPK 116
Query: 466 ERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHG--QV 523
             I V+ D    + + H+     ++HRD+K +N+++      ++ DFG+AR        V
Sbjct: 117 RAIEVIADACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSV 173
Query: 524 ASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKP 574
             T  V+GT  YL+PE         ++DV+  G ++ EVL+G  P     P
Sbjct: 174 TQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSP 224

>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer Length = 395

Iteration: 1
 Score = 70.1 bits (170), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 52/184 (28%), Positives = 94/184 (51%), Gaps = 17/184 (9%)
Query: 408 FLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEER 467
            + E+  L       +VG  G    + G + +  ++M+ GSLD+ + +  G +     E+
Sbjct: 113 IIRELQVLHECNSPYIVGFYGAFYSD-GEISICMEHMDGGSLDQ-VLKKAGRI----PEQ 166
Query: 468 I--RVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVAS 525
           I  +V   V  G+ YL E  + K++HRD+K SN+L++     +L DFG++     GQ+  
Sbjct: 167 ILGKVSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVS-----GQLID 219
Query: 526 T--TRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWEL 583
           +     VGT  Y++PE       S Q+D++  G+ ++E+  GR PI       +E+++  
Sbjct: 220 SMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGC 279
Query: 584 MVQG 587
            V+G
Sbjct: 280 QVEG 283

>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In Complex With Substrates Length = 326

Iteration: 1
 Score = 70.1 bits (170), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 69/264 (26%), Positives = 123/264 (46%), Gaps = 35/264 (13%)
Query: 391 EIAVKRI-SHENDGGTRAFLAEISSLGRL-KHKSLVGLRGWCKREKGSLMLVYDYMENGS 448
           ++AVK + S   +      ++E+  +  + KHK+++ L G C ++ G L ++ +Y   G+
Sbjct: 62  KVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQD-GPLYVIVEYASKGN 120
Query: 449 LDKWIFQ--------C-----DGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIK 495
           L +++          C     +    LS ++ +     VA G+ YL     KK +HRD+ 
Sbjct: 121 LREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSCAYQVARGMEYLAS---KKCIHRDLA 177
Query: 496 SSNVLLDKEMNGRLGDFGLAR-MHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFG 554
           + NVL+ ++   ++ DFGLAR +H       TT     V ++APE       + Q+DV+ 
Sbjct: 178 ARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWS 237
Query: 555 FGILILEVLS-GRRPIEEGKPNLVEMVWELMVQGKXXXXXXXXXXXKGGFDEDEVERVLH 613
           FG+L+ E+ + G  P   G P  VE +++L+ +G                  D       
Sbjct: 238 FGVLLWEIFTLGGSPY-PGVP--VEELFKLLKEGHRMDKPSNCTNELYMMMRD------- 287
Query: 614 LGLLCAYPDPRARPTMRQVVKVLE 637
               C +  P  RPT +Q+V+ L+
Sbjct: 288 ----CWHAVPSQRPTFKQLVEDLD 307

>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain Length = 345

Iteration: 1
 Score = 70.1 bits (170), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 45/151 (29%), Positives = 75/151 (49%), Gaps = 8/151 (5%)
Query: 420 HKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVL 479
           H  LVGL   C + +  L  V +Y+  G L   +F       L  E       +++  + 
Sbjct: 69  HPFLVGLHS-CFQTESRLFFVIEYVNGGDL---MFHMQRQRKLPEEHARFYSAEISLALN 124
Query: 480 YLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPE 539
           YLHE   + +++RD+K  NVLLD E + +L D+G+ +  G     +T+   GT  Y+APE
Sbjct: 125 YLHE---RGIIYRDLKLDNVLLDSEGHIKLTDYGMCK-EGLRPGDTTSXFCGTPNYIAPE 180
Query: 540 VFSSGRASTQTDVFGFGILILEVLSGRRPIE 570
           +          D +  G+L+ E+++GR P +
Sbjct: 181 ILRGEDYGFSVDWWALGVLMFEMMAGRSPFD 211

>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With 2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic Acid ((s)-1,2,2-trimethyl-propyl)-amide Length = 314

Iteration: 1
 Score = 70.1 bits (170), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 53/186 (28%), Positives = 91/186 (48%), Gaps = 22/186 (11%)
Query: 389 GAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKRE-KGSLMLVYDYMENG 447
           GA +AVK++ H      R F  EI  L  L    +V  RG      + SL LV +Y+ +G
Sbjct: 39  GALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSG 98
Query: 448 SLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLY---LHEGWE----KKVLHRDIKSSNVL 500
            L  ++            +R R   D +  +LY   + +G E    ++ +HRD+ + N+L
Sbjct: 99  CLRDFL------------QRHRARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNIL 146
Query: 501 LDKEMNGRLGDFGLARMHGHGQVASTTRVVGT--VGYLAPEVFSSGRASTQTDVFGFGIL 558
           ++ E + ++ DFGLA++    +     R  G   + + APE  S    S Q+DV+ FG++
Sbjct: 147 VESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVV 206
Query: 559 ILEVLS 564
           + E+ +
Sbjct: 207 LYELFT 212

>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site Inhibitor Showing High Selectivity Within The Janus Kinase Family Length = 315

Iteration: 1
 Score = 69.7 bits (169), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 53/186 (28%), Positives = 91/186 (48%), Gaps = 22/186 (11%)
Query: 389 GAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKRE-KGSLMLVYDYMENG 447
           GA +AVK++ H      R F  EI  L  L    +V  RG      + SL LV +Y+ +G
Sbjct: 40  GALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSG 99
Query: 448 SLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLY---LHEGWE----KKVLHRDIKSSNVL 500
            L  ++            +R R   D +  +LY   + +G E    ++ +HRD+ + N+L
Sbjct: 100 CLRDFL------------QRHRARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNIL 147
Query: 501 LDKEMNGRLGDFGLARMHGHGQVASTTRVVG--TVGYLAPEVFSSGRASTQTDVFGFGIL 558
           ++ E + ++ DFGLA++    +     R  G   + + APE  S    S Q+DV+ FG++
Sbjct: 148 VESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVV 207
Query: 559 ILEVLS 564
           + E+ +
Sbjct: 208 LYELFT 213

>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor Length = 349

Iteration: 1
 Score = 69.7 bits (169), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 45/151 (29%), Positives = 75/151 (49%), Gaps = 8/151 (5%)
Query: 420 HKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVL 479
           H  LVGL   C + +  L  V +Y+  G L   +F       L  E       +++  + 
Sbjct: 65  HPFLVGLHS-CFQTESRLFFVIEYVNGGDL---MFHMQRQRKLPEEHARFYSAEISLALN 120
Query: 480 YLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPE 539
           YLHE   + +++RD+K  NVLLD E + +L D+G+ +  G     +T+   GT  Y+APE
Sbjct: 121 YLHE---RGIIYRDLKLDNVLLDSEGHIKLTDYGMCK-EGLRPGDTTSXFCGTPNYIAPE 176
Query: 540 VFSSGRASTQTDVFGFGILILEVLSGRRPIE 570
           +          D +  G+L+ E+++GR P +
Sbjct: 177 ILRGEDYGFSVDWWALGVLMFEMMAGRSPFD 207

>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3- Methoxybenzyl)-7-Azaindole Length = 302

Iteration: 1
 Score = 69.7 bits (169), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 69/264 (26%), Positives = 123/264 (46%), Gaps = 35/264 (13%)
Query: 391 EIAVKRI-SHENDGGTRAFLAEISSLGRL-KHKSLVGLRGWCKREKGSLMLVYDYMENGS 448
           ++AVK + S   +      ++E+  +  + KHK+++ L G C ++ G L ++ +Y   G+
Sbjct: 47  KVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQD-GPLYVIVEYASKGN 105
Query: 449 LDKWIFQ--------C-----DGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIK 495
           L +++          C     +    LS ++ +     VA G+ YL     KK +HRD+ 
Sbjct: 106 LREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSCAYQVARGMEYLAS---KKCIHRDLA 162
Query: 496 SSNVLLDKEMNGRLGDFGLAR-MHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFG 554
           + NVL+ ++   ++ DFGLAR +H       TT     V ++APE       + Q+DV+ 
Sbjct: 163 ARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWS 222
Query: 555 FGILILEVLS-GRRPIEEGKPNLVEMVWELMVQGKXXXXXXXXXXXKGGFDEDEVERVLH 613
           FG+L+ E+ + G  P   G P  VE +++L+ +G                  D       
Sbjct: 223 FGVLLWEIFTLGGSPY-PGVP--VEELFKLLKEGHRMDKPSNCTNELYMMMRD------- 272
Query: 614 LGLLCAYPDPRARPTMRQVVKVLE 637
               C +  P  RPT +Q+V+ L+
Sbjct: 273 ----CWHAVPSQRPTFKQLVEDLD 292

>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2 And Jak3 Kinase Domains In Complex With Cp-690550 And Cmp-6 Length = 327

Iteration: 1
 Score = 69.7 bits (169), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 53/186 (28%), Positives = 91/186 (48%), Gaps = 22/186 (11%)
Query: 389 GAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKRE-KGSLMLVYDYMENG 447
           GA +AVK++ H      R F  EI  L  L    +V  RG      + SL LV +Y+ +G
Sbjct: 52  GALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSG 111
Query: 448 SLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLY---LHEGWE----KKVLHRDIKSSNVL 500
            L  ++            +R R   D +  +LY   + +G E    ++ +HRD+ + N+L
Sbjct: 112 CLRDFL------------QRHRARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNIL 159
Query: 501 LDKEMNGRLGDFGLARMHGHGQVASTTRVVGT--VGYLAPEVFSSGRASTQTDVFGFGIL 558
           ++ E + ++ DFGLA++    +     R  G   + + APE  S    S Q+DV+ FG++
Sbjct: 160 VESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVV 219
Query: 559 ILEVLS 564
           + E+ +
Sbjct: 220 LYELFT 225

>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand Length = 279

Iteration: 1
 Score = 69.7 bits (169), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 50/167 (29%), Positives = 83/167 (49%), Gaps = 5/167 (2%)
Query: 406 RAFLAEISSLGRLKHKSLVGLRGWC-KREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSC 464
           +  ++E++ L  LKH ++V        R   +L +V +Y E G L   I +         
Sbjct: 50  QMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLD 109
Query: 465 EERI-RVLKDVAAGVLYLHEGWE--KKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHG 521
           EE + RV+  +   +   H   +    VLHRD+K +NV LD + N +LGDFGLAR+  H 
Sbjct: 110 EEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNH- 168
Query: 522 QVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRP 568
             +     VGT  Y++PE  +    + ++D++  G L+ E+ +   P
Sbjct: 169 DTSFAKAFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPP 215

>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor 1 Length = 317

Iteration: 1
 Score = 69.7 bits (169), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 68/264 (25%), Positives = 123/264 (46%), Gaps = 35/264 (13%)
Query: 391 EIAVKRI-SHENDGGTRAFLAEISSLGRL-KHKSLVGLRGWCKREKGSLMLVYDYMENGS 448
           ++AVK + S   +      ++E+  +  + KHK+++ L G C ++ G L ++ +Y   G+
Sbjct: 62  KVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQD-GPLYVIVEYASKGN 120
Query: 449 LDKWIFQCDGSMM-------------LSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIK 495
           L +++   +   +             LS ++ +     VA G+ YL     KK +HRD+ 
Sbjct: 121 LREYLQAREPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLAS---KKCIHRDLA 177
Query: 496 SSNVLLDKEMNGRLGDFGLAR-MHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFG 554
           + NVL+ ++   ++ DFGLAR +H       TT     V ++APE       + Q+DV+ 
Sbjct: 178 ARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWS 237
Query: 555 FGILILEVLS-GRRPIEEGKPNLVEMVWELMVQGKXXXXXXXXXXXKGGFDEDEVERVLH 613
           FG+L+ E+ + G  P   G P  VE +++L+ +G                  D       
Sbjct: 238 FGVLLWEIFTLGGSPY-PGVP--VEELFKLLKEGHRMDKPSNCTNELYMMMRD------- 287
Query: 614 LGLLCAYPDPRARPTMRQVVKVLE 637
               C +  P  RPT +Q+V+ L+
Sbjct: 288 ----CWHAVPSQRPTFKQLVEDLD 307

>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662 Length = 279

Iteration: 1
 Score = 69.7 bits (169), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 50/167 (29%), Positives = 84/167 (50%), Gaps = 5/167 (2%)
Query: 406 RAFLAEISSLGRLKHKSLVGLRGWC-KREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSC 464
           +  ++E++ L  LKH ++V        R   +L +V +Y E G L   I +         
Sbjct: 50  QMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLD 109
Query: 465 EERI-RVLKDVAAGVLYLHEGWE--KKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHG 521
           EE + RV+  +   +   H   +    VLHRD+K +NV LD + N +LGDFGLAR+  H 
Sbjct: 110 EEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHD 169
Query: 522 QVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRP 568
           +  +    VGT  Y++PE  +    + ++D++  G L+ E+ +   P
Sbjct: 170 EDFA-KEFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPP 215

>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma Viral Oncogene Homologue (V-Fes) In Complex With Staurosporine And A Consensus Peptide Length = 377

Iteration: 1
 Score = 69.7 bits (169), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 50/159 (31%), Positives = 84/159 (52%), Gaps = 9/159 (5%)
Query: 408 FLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEER 467
           FL E   L +  H ++V L G C  +K  + +V + ++ G  D   F       L  +  
Sbjct: 159 FLQEARILKQYSHPNIVRLIGVCT-QKQPIYIVMELVQGG--DFLTFLRTEGARLRVKTL 215
Query: 468 IRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVAST- 526
           ++++ D AAG+ YL     K  +HRD+ + N L+ ++   ++ DFG++R    G  A++ 
Sbjct: 216 LQMVGDAAAGMEYLES---KCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVXAASG 272
Query: 527 -TRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLS 564
             R V  V + APE  + GR S+++DV+ FGIL+ E  S
Sbjct: 273 GLRQV-PVKWTAPEALNYGRYSSESDVWSFGILLWETFS 310

>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In A Complex With Ligand And Mgatp Length = 333

Iteration: 1
 Score = 69.7 bits (169), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 58/204 (28%), Positives = 101/204 (49%), Gaps = 18/204 (8%)
Query: 389 GAEIAVKRISHENDGGTR-AFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENG 447
           G  +A K I  E     R   + E+  L       +VG  G    + G + +  ++M+ G
Sbjct: 31  GLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSD-GEISICMEHMDGG 89
Query: 448 SLDKWIFQCDGSMMLSCEERI--RVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEM 505
           SLD+ + +  G +     E+I  +V   V  G+ YL E  + K++HRD+K SN+L++   
Sbjct: 90  SLDQ-VLKKAGRI----PEQILGKVSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRG 142
Query: 506 NGRLGDFGLARMHGHGQVAST--TRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVL 563
             +L DFG++     GQ+  +     VGT  Y++PE       S Q+D++  G+ ++E+ 
Sbjct: 143 EIKLCDFGVS-----GQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMA 197
Query: 564 SGRRPIEEGKPNLVEMVWELMVQG 587
            GR PI       +E+++   V+G
Sbjct: 198 VGRYPIPPPDAKELELMFGCQVEG 221

>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium Tuberculosis Length = 299

Iteration: 1
 Score = 69.7 bits (169), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 46/171 (26%), Positives = 79/171 (46%), Gaps = 9/171 (5%)
Query: 408 FLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYME--NGSLDKWIFQCDGSMMLSCE 465
           F  E  +   L H ++V +    + E  +  L Y  ME  +G   + I   +G M  + +
Sbjct: 76  FRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPM--TPK 133
Query: 466 ERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHG--QV 523
             I V+ D    + + H+     ++HRD+K +N+++      ++ DFG+AR        V
Sbjct: 134 RAIEVIADACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSV 190
Query: 524 ASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKP 574
             T  V+GT  YL+PE         ++DV+  G ++ EVL+G  P     P
Sbjct: 191 TQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSP 241

>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fibroblast Growth Factor Receptor 1 Length = 310

Iteration: 1
 Score = 69.7 bits (169), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 69/264 (26%), Positives = 124/264 (46%), Gaps = 35/264 (13%)
Query: 391 EIAVKRI-SHENDGGTRAFLAEISSLGRL-KHKSLVGLRGWCKREKGSLMLVYDYMENGS 448
           ++AVK + S   +      ++E+  +  + KHK+++ L G C ++ G L ++ +Y   G+
Sbjct: 55  KVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQD-GPLYVIVEYASKGN 113
Query: 449 LDKWI---------FQCDGSM----MLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIK 495
           L +++         +  + S      LS ++ +     VA G+ YL     KK +HRD+ 
Sbjct: 114 LREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLAS---KKCIHRDLA 170
Query: 496 SSNVLLDKEMNGRLGDFGLAR-MHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFG 554
           + NVL+ ++   ++ DFGLAR +H       TT     V ++APE       + Q+DV+ 
Sbjct: 171 ARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWS 230
Query: 555 FGILILEVLS-GRRPIEEGKPNLVEMVWELMVQGKXXXXXXXXXXXKGGFDEDEVERVLH 613
           FG+L+ E+ + G  P   G P  VE +++L+ +G                  D       
Sbjct: 231 FGVLLWEIFTLGGSPY-PGVP--VEELFKLLKEGHRMDKPSNCTNELYMMMRD------- 280
Query: 614 LGLLCAYPDPRARPTMRQVVKVLE 637
               C +  P  RPT +Q+V+ L+
Sbjct: 281 ----CWHAVPSQRPTFKQLVEDLD 300

>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In A Complex With Ligand And Mgatp Length = 341

Iteration: 1
 Score = 69.7 bits (169), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 58/204 (28%), Positives = 101/204 (49%), Gaps = 18/204 (8%)
Query: 389 GAEIAVKRISHENDGGTR-AFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENG 447
           G  +A K I  E     R   + E+  L       +VG  G    + G + +  ++M+ G
Sbjct: 31  GLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSD-GEISICMEHMDGG 89
Query: 448 SLDKWIFQCDGSMMLSCEERI--RVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEM 505
           SLD+ + +  G +     E+I  +V   V  G+ YL E  + K++HRD+K SN+L++   
Sbjct: 90  SLDQ-VLKKAGRI----PEQILGKVSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRG 142
Query: 506 NGRLGDFGLARMHGHGQVAST--TRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVL 563
             +L DFG++     GQ+  +     VGT  Y++PE       S Q+D++  G+ ++E+ 
Sbjct: 143 EIKLCDFGVS-----GQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMA 197
Query: 564 SGRRPIEEGKPNLVEMVWELMVQG 587
            GR PI       +E+++   V+G
Sbjct: 198 VGRYPIPPPDAKELELMFGCQVEG 221

>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1 Length = 328

Iteration: 1
 Score = 69.7 bits (169), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 57/203 (28%), Positives = 102/203 (50%), Gaps = 15/203 (7%)
Query: 389 GAEIAVKRI--SHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMEN 446
           G E+A+K I  +  N    +    E+  +  L H ++V L    + EK +L L+ +Y   
Sbjct: 37  GREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEK-TLYLIMEYASG 95
Query: 447 GSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMN 506
           G +  ++       M   E R +  + + + V Y H+   K+++HRD+K+ N+LLD +MN
Sbjct: 96  GEVFDYLVA--HGRMKEKEARSK-FRQIVSAVQYCHQ---KRIVHRDLKAENLLLDADMN 149
Query: 507 GRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRAS-TQTDVFGFGILILEVLSG 565
            ++ DFG +     G    T    G+  Y APE+F   +    + DV+  G+++  ++SG
Sbjct: 150 IKIADFGFSNEFTVGGKLDT--FCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG 207
Query: 566 RRPIEEGKPNLVEMVWELMVQGK 588
             P +    NL E+  E +++GK
Sbjct: 208 SLPFD--GQNLKEL-RERVLRGK 227

>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene Homologue (V- Fes) Length = 377

Iteration: 1
 Score = 69.7 bits (169), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 50/159 (31%), Positives = 84/159 (52%), Gaps = 9/159 (5%)
Query: 408 FLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEER 467
           FL E   L +  H ++V L G C  +K  + +V + ++ G  D   F       L  +  
Sbjct: 159 FLQEARILKQYSHPNIVRLIGVCT-QKQPIYIVMELVQGG--DFLTFLRTEGARLRVKTL 215
Query: 468 IRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVAST- 526
           ++++ D AAG+ YL     K  +HRD+ + N L+ ++   ++ DFG++R    G  A++ 
Sbjct: 216 LQMVGDAAAGMEYLES---KCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAASG 272
Query: 527 -TRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLS 564
             R V  V + APE  + GR S+++DV+ FGIL+ E  S
Sbjct: 273 GLRQV-PVKWTAPEALNYGRYSSESDVWSFGILLWETFS 310

>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From Par-3 Length = 396

Iteration: 1
 Score = 69.7 bits (169), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 45/151 (29%), Positives = 75/151 (49%), Gaps = 8/151 (5%)
Query: 420 HKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVL 479
           H  LVGL   C + +  L  V +Y+  G L   +F       L  E       +++  + 
Sbjct: 112 HPFLVGLHS-CFQTESRLFFVIEYVNGGDL---MFHMQRQRKLPEEHARFYSAEISLALN 167
Query: 480 YLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPE 539
           YLHE   + +++RD+K  NVLLD E + +L D+G+ +  G     +T+   GT  Y+APE
Sbjct: 168 YLHE---RGIIYRDLKLDNVLLDSEGHIKLTDYGMCK-EGLRPGDTTSTFCGTPNYIAPE 223
Query: 540 VFSSGRASTQTDVFGFGILILEVLSGRRPIE 570
           +          D +  G+L+ E+++GR P +
Sbjct: 224 ILRGEDYGFSVDWWALGVLMFEMMAGRSPFD 254

>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase In Complex With Arq 069 Length = 306

Iteration: 1
 Score = 69.3 bits (168), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 69/265 (26%), Positives = 124/265 (46%), Gaps = 35/265 (13%)
Query: 390 AEIAVKRI-SHENDGGTRAFLAEISSLGRL-KHKSLVGLRGWCKREKGSLMLVYDYMENG 447
            ++AVK + S   +      ++E+  +  + KHK+++ L G C ++ G L ++ +Y   G
Sbjct: 50  TKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQD-GPLYVIVEYASKG 108
Query: 448 SLDKWI---------FQCDGSM----MLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDI 494
           +L +++         +  + S      LS ++ +     VA G+ YL     KK +HRD+
Sbjct: 109 NLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLAS---KKCIHRDL 165
Query: 495 KSSNVLLDKEMNGRLGDFGLAR-MHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVF 553
            + NVL+ ++   ++ DFGLAR +H       TT     V ++APE       + Q+DV+
Sbjct: 166 AARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVW 225
Query: 554 GFGILILEVLS-GRRPIEEGKPNLVEMVWELMVQGKXXXXXXXXXXXKGGFDEDEVERVL 612
            FG+L+ E+ + G  P   G P  VE +++L+ +G                  D      
Sbjct: 226 SFGVLLWEIFTLGGSPY-PGVP--VEELFKLLKEGHRMDKPSNCTNELYMMMRD------ 276
Query: 613 HLGLLCAYPDPRARPTMRQVVKVLE 637
                C +  P  RPT +Q+V+ L+
Sbjct: 277 -----CWHAVPSQRPTFKQLVEDLD 296

>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast Growth Factor Receptor 1 In Complex With 5-(2-Thienyl) Nicotinic Acid Length = 317

Iteration: 1
 Score = 69.3 bits (168), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 69/264 (26%), Positives = 124/264 (46%), Gaps = 35/264 (13%)
Query: 391 EIAVKRI-SHENDGGTRAFLAEISSLGRL-KHKSLVGLRGWCKREKGSLMLVYDYMENGS 448
           ++AVK + S   +      ++E+  +  + KHK+++ L G C ++ G L ++ +Y   G+
Sbjct: 62  KVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQD-GPLYVIVEYASKGN 120
Query: 449 LDKWI---------FQCDGSM----MLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIK 495
           L +++         +  + S      LS ++ +     VA G+ YL     KK +HRD+ 
Sbjct: 121 LREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLAS---KKCIHRDLA 177
Query: 496 SSNVLLDKEMNGRLGDFGLAR-MHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFG 554
           + NVL+ ++   ++ DFGLAR +H       TT     V ++APE       + Q+DV+ 
Sbjct: 178 ARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWS 237
Query: 555 FGILILEVLS-GRRPIEEGKPNLVEMVWELMVQGKXXXXXXXXXXXKGGFDEDEVERVLH 613
           FG+L+ E+ + G  P   G P  VE +++L+ +G                  D       
Sbjct: 238 FGVLLWEIFTLGGSPY-PGVP--VEELFKLLKEGHRMDKPSNCTNELYMMMRD------- 287
Query: 614 LGLLCAYPDPRARPTMRQVVKVLE 637
               C +  P  RPT +Q+V+ L+
Sbjct: 288 ----CWHAVPSQRPTFKQLVEDLD 307

>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex With A Staurosporine Analogue Length = 290

Iteration: 1
 Score = 69.3 bits (168), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 52/186 (27%), Positives = 90/186 (48%), Gaps = 22/186 (11%)
Query: 389 GAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKRE-KGSLMLVYDYMENG 447
           GA +AVK++ H      R F  EI  L  L    +V  RG      +  L LV +Y+ +G
Sbjct: 36  GALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRPELRLVMEYLPSG 95
Query: 448 SLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLY---LHEGWE----KKVLHRDIKSSNVL 500
            L  ++            +R R   D +  +LY   + +G E    ++ +HRD+ + N+L
Sbjct: 96  CLRDFL------------QRHRARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNIL 143
Query: 501 LDKEMNGRLGDFGLARMHGHGQVASTTRVVG--TVGYLAPEVFSSGRASTQTDVFGFGIL 558
           ++ E + ++ DFGLA++    +     R  G   + + APE  S    S Q+DV+ FG++
Sbjct: 144 VESEAHVKIADFGLAKLLPLDKDXXVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVV 203
Query: 559 ILEVLS 564
           + E+ +
Sbjct: 204 LYELFT 209

>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical Protein Kinase C-Iota Length = 364

Iteration: 1
 Score = 69.3 bits (168), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 45/151 (29%), Positives = 75/151 (49%), Gaps = 8/151 (5%)
Query: 420 HKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVL 479
           H  LVGL   C + +  L  V +Y+  G L   +F       L  E       +++  + 
Sbjct: 80  HPFLVGLHS-CFQTESRLFFVIEYVNGGDL---MFHMQRQRKLPEEHARFYSAEISLALN 135
Query: 480 YLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPE 539
           YLHE   + +++RD+K  NVLLD E + +L D+G+ +  G     +T+   GT  Y+APE
Sbjct: 136 YLHE---RGIIYRDLKLDNVLLDSEGHIKLTDYGMCK-EGLRPGDTTSXFCGTPNYIAPE 191
Query: 540 VFSSGRASTQTDVFGFGILILEVLSGRRPIE 570
           +          D +  G+L+ E+++GR P +
Sbjct: 192 ILRGEDYGFSVDWWALGVLMFEMMAGRSPFD 222

>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor Receptor 1 Kinase Domain In Complex With Compound 1 Length = 309

Iteration: 1
 Score = 69.3 bits (168), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 64/234 (27%), Positives = 110/234 (47%), Gaps = 33/234 (14%)
Query: 419 KHKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWI---------FQCDGSM----MLSCE 465
           KHK+++ L G C ++ G L ++ +Y   G+L +++         +  + S      LS +
Sbjct: 84  KHKNIINLLGACTQD-GPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSK 142
Query: 466 ERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLAR-MHGHGQVA 524
           + +     VA G+ YL     KK +HRD+ + NVL+ ++   ++ DFGLAR +H      
Sbjct: 143 DLVSCAYQVARGMEYLAS---KKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYK 199
Query: 525 STTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLS-GRRPIEEGKPNLVEMVWEL 583
            TT     V ++APE       + Q+DV+ FG+L+ E+ + G  P   G P  VE +++L
Sbjct: 200 KTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPY-PGVP--VEELFKL 256
Query: 584 MVQGKXXXXXXXXXXXKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLE 637
           + +G                  D           C +  P  RPT +Q+V+ L+
Sbjct: 257 LKEGHRMDKPSNCTNELYMMMRD-----------CWHAVPSQRPTFKQLVEDLD 299

>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex. Length = 284

Iteration: 1
 Score = 69.3 bits (168), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 48/191 (25%), Positives = 92/191 (48%), Gaps = 27/191 (14%)
Query: 389 GAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRG-W--------------CKRE 433
           G    +KR+ + N+   R    E+ +L +L H ++V   G W               + +
Sbjct: 36  GKTYVIKRVKYNNEKAER----EVKALAKLDHVNIVHYNGCWDGFDYDPETSSKNSSRSK 91
Query: 434 KGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRD 493
              L +  ++ + G+L++WI +  G  +      + + + +  GV Y+H    KK+++RD
Sbjct: 92  TKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLA-LELFEQITKGVDYIHS---KKLINRD 147
Query: 494 IKSSNVLLDKEMNGRLGDFGL-ARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDV 552
           +K SN+ L      ++GDFGL   +   G+     R  GT+ Y++PE  SS     + D+
Sbjct: 148 LKPSNIFLVDTKQVKIGDFGLVTSLKNDGK---RXRSKGTLRYMSPEQISSQDYGKEVDL 204
Query: 553 FGFGILILEVL 563
           +  G+++ E+L
Sbjct: 205 YALGLILAELL 215

>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp Length = 328

Iteration: 1
 Score = 69.3 bits (168), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 58/204 (28%), Positives = 101/204 (49%), Gaps = 18/204 (8%)
Query: 389 GAEIAVKRISHENDGGTR-AFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENG 447
           G  +A K I  E     R   + E+  L       +VG  G    + G + +  ++M+ G
Sbjct: 31  GLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSD-GEISICMEHMDGG 89
Query: 448 SLDKWIFQCDGSMMLSCEERI--RVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEM 505
           SLD+ + +  G +     E+I  +V   V  G+ YL E  + K++HRD+K SN+L++   
Sbjct: 90  SLDQ-VLKKAGRI----PEQILGKVSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRG 142
Query: 506 NGRLGDFGLARMHGHGQVAST--TRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVL 563
             +L DFG++     GQ+  +     VGT  Y++PE       S Q+D++  G+ ++E+ 
Sbjct: 143 EIKLCDFGVS-----GQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMA 197
Query: 564 SGRRPIEEGKPNLVEMVWELMVQG 587
            GR PI       +E+++   V+G
Sbjct: 198 VGRYPIPPPDAKELELMFGCQVEG 221

>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound Length = 322

Iteration: 1
 Score = 69.3 bits (168), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 58/204 (28%), Positives = 101/204 (49%), Gaps = 18/204 (8%)
Query: 389 GAEIAVKRISHENDGGTR-AFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENG 447
           G  +A K I  E     R   + E+  L       +VG  G    + G + +  ++M+ G
Sbjct: 31  GLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSD-GEISICMEHMDGG 89
Query: 448 SLDKWIFQCDGSMMLSCEERI--RVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEM 505
           SLD+ + +  G +     E+I  +V   V  G+ YL E  + K++HRD+K SN+L++   
Sbjct: 90  SLDQ-VLKKAGRI----PEQILGKVSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRG 142
Query: 506 NGRLGDFGLARMHGHGQVAST--TRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVL 563
             +L DFG++     GQ+  +     VGT  Y++PE       S Q+D++  G+ ++E+ 
Sbjct: 143 EIKLCDFGVS-----GQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMA 197
Query: 564 SGRRPIEEGKPNLVEMVWELMVQG 587
            GR PI       +E+++   V+G
Sbjct: 198 VGRYPIPPPDAKELELMFGCQVEG 221

>pdb|1QNW|A Chain A, Lectin Ii From Ulex Europaeus Length = 242

Iteration: 1
 Score = 69.3 bits (168), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 73/264 (27%), Positives = 118/264 (44%), Gaps = 50/264 (18%)
Query: 28  FVFNGF--NSSNLSLYGTATVES----RILTLTNSTTFTIGRALYPSKIPTKRPNSSYVY 81
           F F+ F  N  N+   G A+V +    ++  ++  TT +IGRALY + I      +  V 
Sbjct: 8   FNFDKFVPNQKNIIFQGDASVSTTGVLQVTKVSKPTTTSIGRALYAAPIQIWDSITGKVA 67
Query: 82  PFSTSFIFAMAPYK--GVLAGHGLVFLFVPFHG-IKGATEAQHLGLFNRTNDGNSSNHVF 138
            F+TSF F +   K  GV    GL F   P +  I   + A   GLF+ ++   SSN + 
Sbjct: 68  SFATSFSFVVKADKSDGV---DGLAFFLAPANSQIPSGSSAGMFGLFSSSD-SKSSNQII 123
Query: 139 GVEFDVFKNQEFN--DIDENHVGIDVNSLTSVSAHAAGYWPDNQXXXXXXXXXXXXXXXE 196
            VEFD +  + +N  D D  H+GIDVNS+                               
Sbjct: 124 AVEFDTYFGKAYNPWDPDFKHIGIDVNSI------------------------------- 152
Query: 197 KSFKELKLN--NGKNYQVWIDYADSFINITMVEAGMKRPKRPLLSVPLNLSGVLEDEMYV 254
           KS K +K +  NG+   V I Y     ++T+  +        +++  ++L  +L + + V
Sbjct: 153 KSIKTVKWDWRNGEVADVVITYRAPTKSLTVCLSYPSDGTSNIITASVDLKAILPEWVSV 212
Query: 255 GFTAATGQLV--ESHKILAWSFSN 276
           GF+   G     E+H +L+W F++
Sbjct: 213 GFSGGVGNAAEFETHDVLSWYFTS 236

>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In A Ternary Complex With Compound 1, Atp-Gs And Mg2p Length = 360

Iteration: 1
 Score = 68.9 bits (167), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 47/157 (29%), Positives = 85/157 (54%), Gaps = 16/157 (10%)
Query: 435 GSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERI--RVLKDVAAGVLYLHEGWEKKVLHR 492
           G + +  ++M+ GSLD+ + +  G +     E+I  +V   V  G+ YL E  + K++HR
Sbjct: 104 GEISICMEHMDGGSLDQ-VLKKAGRI----PEQILGKVSIAVIKGLTYLRE--KHKIMHR 156
Query: 493 DIKSSNVLLDKEMNGRLGDFGLARMHGHGQVAST--TRVVGTVGYLAPEVFSSGRASTQT 550
           D+K SN+L++     +L DFG++     GQ+  +     VGT  Y++PE       S Q+
Sbjct: 157 DVKPSNILVNSRGEIKLCDFGVS-----GQLIDSMANSFVGTRSYMSPERLQGTHYSVQS 211
Query: 551 DVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQG 587
           D++  G+ ++E+  GR PI       +E+++   V+G
Sbjct: 212 DIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEG 248

>pdb|1DBN|A Chain A, Maackia Amurensis Leukoagglutinin (Lectin) With Sialyllactose Length = 239

Iteration: 1
 Score = 68.9 bits (167), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 77/267 (28%), Positives = 123/267 (46%), Gaps = 47/267 (17%)
Query: 26  VDFVFNGF--NSSNLSLYGTATVESR-ILTLT-----NSTTFTIGRALYPSKIPTKRPNS 77
           + F  N F  N ++L   G A+V S  +L LT         +++GRALY + +      +
Sbjct: 4   LSFTINNFVPNEADLLFQGEASVSSTGVLQLTKVENGQPQKYSVGRALYAAPVRIWGNTT 63
Query: 78  SYVYPFSTSFIFAMAPYKGVLAGHGLVFLFVPFHG-IKGATEAQHLGLFNRTNDGNSSNH 136
             V  FSTSF F +      +   GL F   P    I   + +++LGLFN +N  +SSN 
Sbjct: 64  GSVASFSTSFTFVVKAPNPDITSDGLAFYLAPPDSQIPSGSVSKYLGLFNNSN-SDSSNQ 122
Query: 137 VFGVEFDVFKNQEFNDIDEN--HVGIDVNSLTSVSAHAAGYWPDNQXXXXXXXXXXXXXX 194
           +  VEFD +    ++  D N  H+GIDVN + S+                          
Sbjct: 123 IVAVEFDTYFAHSYDPWDPNYRHIGIDVNGIESI-------------------------- 156
Query: 195 XEKSFKELKLNNGKNYQVWIDYADSFINITMVEAGMKRPKRPLLSVP--LNLSGVLEDEM 252
             K+ +   +N G  +   I Y     N T++ + +    +   SV   ++L  +L + +
Sbjct: 157 --KTVQWDWINGGVAFAT-ITYLAP--NKTLIASLVYPSNQTTFSVAASVDLKEILPEWV 211
Query: 253 YVGFTAATG--QLVESHKILAWSFSNT 277
            VGF+AATG    VE+H +L+WSF++T
Sbjct: 212 RVGFSAATGYPTEVETHDVLSWSFTST 238

>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In Rodent Cancer Tumor Models Length = 297

Iteration: 1
 Score = 68.9 bits (167), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 52/199 (26%), Positives = 101/199 (50%), Gaps = 33/199 (16%)
Query: 392 IAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDK 451
           +AVK +        + F  E   L  L+H+ +V   G C  +   L++V++YM++G L+K
Sbjct: 48  VAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCG-DGDPLIMVFEYMKHGDLNK 106
Query: 452 WIF---------------QCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKS 496
           ++                Q  G + LS  + + +   +A+G++YL     +  +HRD+ +
Sbjct: 107 FLRAHGPDAMILVDGQPRQAKGELGLS--QMLHIASQIASGMVYLAS---QHFVHRDLAT 161
Query: 497 SNVLLDKEMNGRLGDFGLARMHGHGQVASTT--RVVG----TVGYLAPEVFSSGRASTQT 550
            N L+   +  ++GDFG++R      V ST   RV G     + ++ PE     + +T++
Sbjct: 162 RNCLVGANLLVKIGDFGMSR-----DVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTES 216
Query: 551 DVFGFGILILEVLS-GRRP 568
           DV+ FG+++ E+ + G++P
Sbjct: 217 DVWSFGVILWEIFTYGKQP 235

>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment Length = 336

Iteration: 1
 Score = 68.9 bits (167), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 52/172 (30%), Positives = 86/172 (50%), Gaps = 12/172 (6%)
Query: 411 EISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRV 470
           EIS L  L+H  ++ L          +++V +Y   G L  +I +      ++ +E  R 
Sbjct: 59  EISYLKLLRHPHIIKLYDVIT-TPTDIVMVIEYA-GGELFDYIVE---KKRMTEDEGRRF 113
Query: 471 LKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRVV 530
            + +   + Y H     K++HRD+K  N+LLD  +N ++ DFGL+ +   G    T+   
Sbjct: 114 FQQIICAIEYCHR---HKIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNFLKTS--C 168
Query: 531 GTVGYLAPEVFSSG-RASTQTDVFGFGILILEVLSGRRPI-EEGKPNLVEMV 580
           G+  Y APEV +    A  + DV+  GI++  +L GR P  +E  PNL + V
Sbjct: 169 GSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNLFKKV 220

>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human Rsk-1 Bound To Amp-Pcp Length = 321

Iteration: 1
 Score = 68.6 bits (166), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 48/157 (30%), Positives = 85/157 (54%), Gaps = 10/157 (6%)
Query: 415 LGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDV 474
           L  + H  +V L  +  + +G L L+ D++  G L     +    +M + E+    L ++
Sbjct: 84  LADVNHPFVVKLH-YAFQTEGKLYLILDFLRGGDL---FTRLSKEVMFTEEDVKFYLAEL 139
Query: 475 AAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMH-GHGQVASTTRVVGTV 533
           A G+ +LH      +++RD+K  N+LLD+E + +L DFGL++    H + A +    GTV
Sbjct: 140 ALGLDHLHS---LGIIYRDLKPENILLDEEGHIKLTDFGLSKEAIDHEKKAYS--FCGTV 194
Query: 534 GYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIE 570
            Y+APEV +    S   D + +G+L+ E+L+G  P +
Sbjct: 195 EYMAPEVVNRQGHSHSADWWSYGVLMFEMLTGSLPFQ 231

>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat Length = 332

Iteration: 1
 Score = 68.6 bits (166), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 57/194 (29%), Positives = 93/194 (47%), Gaps = 14/194 (7%)
Query: 392 IAVKRISHEN-DGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLD 450
           +A+K I+ +  +G   +   EI+ L ++KH ++V L        G L L+   +  G L 
Sbjct: 46  VAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIVALDD-IYESGGHLYLIMQLVSGGELF 104
Query: 451 KWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVL---LDKEMNG 507
             I +       +  +  R++  V   V YLH+     ++HRD+K  N+L   LD++   
Sbjct: 105 DRIVE---KGFYTERDASRLIFQVLDAVKYLHD---LGIVHRDLKPENLLYYSLDEDSKI 158
Query: 508 RLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRR 567
            + DFGL++M   G V ST    GT GY+APEV +    S   D +  G++   +L G  
Sbjct: 159 MISDFGLSKMEDPGSVLSTA--CGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYP 216
Query: 568 PI-EEGKPNLVEMV 580
           P  +E    L E +
Sbjct: 217 PFYDENDAKLFEQI 230

>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g Hyperactivating Mutant In Apo Form. Length = 303

Iteration: 1
 Score = 68.6 bits (166), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 51/197 (25%), Positives = 95/197 (48%), Gaps = 32/197 (16%)
Query: 393 AVKRISHENDGGTRAFLAEISSLGRLKHKSLVGL-RGWCKR-----------EKGSLMLV 440
           A+K+I H  +  +   L+E+  L  L H+ +V     W +R           +K +L + 
Sbjct: 35  AIKKIRHTEEKLS-TILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQ 93
Query: 441 YDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVL 500
            +Y ENG+L   I     ++    +E  R+ + +   + Y+H    + ++HRD+K  N+ 
Sbjct: 94  MEYCENGTLYDLIHS--ENLNQQRDEYWRLFRQILEALSYIHS---QGIIHRDLKPMNIF 148
Query: 501 LDKEMNGRLGDFGLAR-MHGH------------GQVASTTRVVGTVGYLAPEVFS-SGRA 546
           +D+  N ++GDFGLA+ +H              G   + T  +GT  Y+A EV   +G  
Sbjct: 149 IDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHY 208
Query: 547 STQTDVFGFGILILEVL 563
           + + D++  GI+  E++
Sbjct: 209 NEKIDMYSLGIIFFEMI 225

>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence Of 3brb-Pp1 Length = 298

Iteration: 1
 Score = 68.6 bits (166), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 57/187 (30%), Positives = 95/187 (50%), Gaps = 18/187 (9%)
Query: 389 GAEIAVKRISH---ENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYME 445
           G E AVK IS    +      + L E+  L +L H +++ L  + + +KG   LV +   
Sbjct: 57  GQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFE-DKGYFYLVGEVYT 115
Query: 446 NGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLD--- 502
            G L   I         S  +  R+++ V +G+ Y+H+    K++HRD+K  N+LL+   
Sbjct: 116 GGELFDEII---SRKRFSEVDAARIIRQVLSGITYMHKN---KIVHRDLKPENLLLESKS 169
Query: 503 KEMNGRLGDFGLARMHGHGQVASTTR-VVGTVGYLAPEVFSSGRASTQTDVFGFGILILE 561
           K+ N R+ DFGL+    H + +   +  +GT  Y+APEV   G    + DV+  G+++  
Sbjct: 170 KDANIRIIDFGLS---THFEASKKMKDKIGTAYYIAPEVL-HGTYDEKCDVWSTGVILYI 225
Query: 562 VLSGRRP 568
           +LSG  P
Sbjct: 226 LLSGCPP 232

>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase Mst4 In Complex With An Quinazolin Length = 301

Iteration: 1
 Score = 68.6 bits (166), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 39/105 (37%), Positives = 61/105 (58%), Gaps = 4/105 (3%)
Query: 470 VLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRV 529
           +LK++  G+ YLH   EKK+ HRDIK++NVLL ++ + +L DFG+A      Q+   T  
Sbjct: 125 MLKEILKGLDYLHS--EKKI-HRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNT-F 180
Query: 530 VGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKP 574
           VGT  ++APEV       ++ D++  GI  +E+  G  P  +  P
Sbjct: 181 VGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHP 225

>pdb|1LOA|A Chain A, Three-Dimensional Structures Of Complexes Of Lathyrus Ochrus Isolectin I With Glucose And Mannose: Fine Specificity Of The Monosaccharide-Binding Site Length = 181

Iteration: 1
 Score = 68.6 bits (166), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 46/142 (32%), Positives = 66/142 (46%), Gaps = 3/142 (2%)
Query: 32  GFNSSNLSLYGTATVESRILTLTNSTTFTIGRALYPSKIPTKRPNSSYVYPFSTSFIFAM 91
           G +  NL   G        LTLT +   T+GRALY S I      +  V  F TSF F +
Sbjct: 12  GPDQQNLIFQGDGYTTKERLTLTKAVRNTVGRALYSSPIHIWDSKTGNVANFVTSFTFVI 71
Query: 92  APYKGVLAGHGLVFLFVPFHGIKGATEAQHLGLFNRTNDGNSSNHVFGVEFDVFKNQEFN 151
                     G  F   P    K  T   +LG+FN + D + ++    VEFD F N  ++
Sbjct: 72  DAPNSYNVADGFTFFIAPVD-TKPQTGGGYLGVFN-SKDYDKTSQTVAVEFDTFYNTAWD 129
Query: 152 DID-ENHVGIDVNSLTSVSAHA 172
             + + H+GIDVNS+ S++  +
Sbjct: 130 PSNGDRHIGIDVNSIKSINTKS 151

>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain Length = 306

Iteration: 1
 Score = 68.6 bits (166), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 51/207 (24%), Positives = 95/207 (45%), Gaps = 46/207 (22%)
Query: 389 GAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRG-W------------------ 429
           G    ++R+ + N+   R    E+ +L +L H ++V   G W                  
Sbjct: 37  GKTYVIRRVKYNNEKAER----EVKALAKLDHVNIVHYNGCWDGFDYDPETSDDSLESSD 92
Query: 430 ---------CKREKGSLMLVYDYMENGSLDKWIFQCDGSMM---LSCEERIRVLKDVAAG 477
                     + +   L +  ++ + G+L++WI +  G  +   L+ E    + + +  G
Sbjct: 93  YDPENSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALE----LFEQITKG 148
Query: 478 VLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGL-ARMHGHGQVASTTRVVGTVGYL 536
           V Y+H    KK++HRD+K SN+ L      ++GDFGL   +   G+    TR  GT+ Y+
Sbjct: 149 VDYIHS---KKLIHRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGK---RTRSKGTLRYM 202
Query: 537 APEVFSSGRASTQTDVFGFGILILEVL 563
           +PE  SS     + D++  G+++ E+L
Sbjct: 203 SPEQISSQDYGKEVDLYALGLILAELL 229

>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of The Insulin Receptor Tyrosine Kinase Length = 306

Iteration: 1
 Score = 68.6 bits (166), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 66/266 (24%), Positives = 124/266 (46%), Gaps = 32/266 (12%)
Query: 388 GGAE--IAVKRISHENDGGTR-AFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYM 444
           G AE  +AVK ++       R  FL E S +       +V L G   + + +L +V + M
Sbjct: 44  GEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTL-VVMELM 102
Query: 445 ENGSLDKWIFQC-------DGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSS 497
            +G L  ++           G    + +E I++  ++A G+ YL+    KK +HRD+ + 
Sbjct: 103 AHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNA---KKFVHRDLAAR 159
Query: 498 NVLLDKEMNGRLGDFGLAR-MHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFG 556
           N ++  +   ++GDFG+ R ++         + +  V ++APE    G  +T +D++ FG
Sbjct: 160 NCMVAHDFTVKIGDFGMTRDIYETAYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFG 219
Query: 557 ILILEVLSGRRPIEEGKPNLVEMVWELMVQGKXXXXXXXXXXXKGGFDEDE--VERVLHL 614
           +++ E+ S      +G  N  E V + ++ G             G  D+ +   ERV  L
Sbjct: 220 VVLWEITSLAEQPYQGLSN--EQVLKFVMDG-------------GYLDQPDNCPERVTDL 264
Query: 615 GLLCAYPDPRARPTMRQVVKVLEGKI 640
             +C   +P+ RPT  ++V +L+  +
Sbjct: 265 MRMCWQFNPKMRPTFLEIVNLLKDDL 290

>pdb|1LOF|C Chain C, X-Ray Structure Of A Biantennary Octasaccharide-Lectin Complex At 2.3 Angstroms Resolution Length = 181

Iteration: 1
 Score = 68.6 bits (166), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 46/142 (32%), Positives = 66/142 (46%), Gaps = 3/142 (2%)
Query: 32  GFNSSNLSLYGTATVESRILTLTNSTTFTIGRALYPSKIPTKRPNSSYVYPFSTSFIFAM 91
           G +  NL   G        LTLT +   T+GRALY S I      +  V  F TSF F +
Sbjct: 12  GPDQQNLIFQGDGYTTKERLTLTKAVRNTVGRALYSSPIHIWDSKTGNVANFVTSFTFVI 71
Query: 92  APYKGVLAGHGLVFLFVPFHGIKGATEAQHLGLFNRTNDGNSSNHVFGVEFDVFKNQEFN 151
                     G  F   P    K  T   +LG+FN + D + ++    VEFD F N  ++
Sbjct: 72  DAPNSYNVADGFTFFIAPVD-TKPQTGGGYLGVFN-SKDYDKTSQTVAVEFDTFYNTAWD 129
Query: 152 DID-ENHVGIDVNSLTSVSAHA 172
             + + H+GIDVNS+ S++  +
Sbjct: 130 PSNGDRHIGIDVNSIKSINTKS 151

>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6 Bound To Amppnp Length = 576

Iteration: 1
 Score = 68.6 bits (166), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 46/153 (30%), Positives = 75/153 (49%), Gaps = 6/153 (3%)
Query: 434 KGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRD 493
           K +L LV   M  G L   I+   G         +    ++  G+  LH    +++++RD
Sbjct: 256 KDALCLVLTLMNGGDLKFHIYHM-GQAGFPEARAVFYAAEICCGLEDLHR---ERIVYRD 311
Query: 494 IKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVF 553
           +K  N+LLD   + R+ D GLA     GQ       VGTVGY+APEV  + R +   D +
Sbjct: 312 LKPENILLDDHGHIRISDLGLAVHVPEGQTIKGR--VGTVGYMAPEVVKNERYTFSPDWW 369
Query: 554 GFGILILEVLSGRRPIEEGKPNLVEMVWELMVQ 586
             G L+ E+++G+ P ++ K  +     E +V+
Sbjct: 370 ALGCLLYEMIAGQSPFQQRKKKIKREEVERLVK 402

>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7- Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2- Phenylcyclopropyl)urea Length = 293

Iteration: 1
 Score = 68.2 bits (165), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 49/164 (29%), Positives = 88/164 (53%), Gaps = 11/164 (6%)
Query: 408 FLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEER 467
            LAE + + +L +  +V + G C+ E  S MLV +  E G L+K++ Q   +  +  +  
Sbjct: 75  LLAEANVMQQLDNPYIVRMIGICEAE--SWMLVMEMAELGPLNKYLQQ---NRHVKDKNI 129
Query: 468 IRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTT 527
           I ++  V+ G+ YL E      +HRD+ + NVLL  +   ++ DFGL++     +     
Sbjct: 130 IELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKA 186
Query: 528 RVVGT--VGYLAPEVFSSGRASTQTDVFGFGILILEVLS-GRRP 568
           +  G   V + APE  +  + S+++DV+ FG+L+ E  S G++P
Sbjct: 187 QTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 230

>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic Domain With Pyrazolylbenzimidazole Inhibitor 416 Length = 299

Iteration: 1
 Score = 68.2 bits (165), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 49/164 (29%), Positives = 88/164 (53%), Gaps = 11/164 (6%)
Query: 408 FLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEER 467
            LAE + + +L +  +V + G C+ E  S MLV +  E G L+K++ Q   +  +  +  
Sbjct: 75  LLAEANVMQQLDNPYIVRMIGICEAE--SWMLVMEMAELGPLNKYLQQ---NRHVKDKNI 129
Query: 468 IRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTT 527
           I ++  V+ G+ YL E      +HRD+ + NVLL  +   ++ DFGL++     +     
Sbjct: 130 IELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKA 186
Query: 528 RVVGT--VGYLAPEVFSSGRASTQTDVFGFGILILEVLS-GRRP 568
           +  G   V + APE  +  + S+++DV+ FG+L+ E  S G++P
Sbjct: 187 QTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 230

>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a) Kinase Domain In Complex With Dorsomorphin Length = 322

Iteration: 1
 Score = 68.2 bits (165), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 54/170 (31%), Positives = 84/170 (49%), Gaps = 20/170 (11%)
Query: 411 EISSLGRLKHKSLVGLRGWCKREKG---SLMLVYDYMENGSLDKWIFQCDGSMMLSCEER 467
           E+ SL  +KH++++   G  KR       L L+  + E GSL  ++     + ++S  E 
Sbjct: 68  EVYSLPGMKHENILQFIGAEKRGTSVDVDLWLITAFHEKGSLSDFL----KANVVSWNEL 123
Query: 468 IRVLKDVAAGVLYLHE-------GWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGH 520
             + + +A G+ YLHE       G +  + HRDIKS NVLL   +   + DFGLA     
Sbjct: 124 CHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEA 183
Query: 521 GQVASTTR-VVGTVGYLAPEVFSSG-----RASTQTDVFGFGILILEVLS 564
           G+ A  T   VGT  Y+APEV          A  + D++  G+++ E+ S
Sbjct: 184 GKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELAS 233

>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2 Length = 365

Iteration: 1
 Score = 68.2 bits (165), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 45/144 (31%), Positives = 72/144 (50%), Gaps = 17/144 (11%)
Query: 433 EKGSLM-LVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLH 491
           E  S M LV+D M  G L  ++ +    + LS +E   +++ +   V +LH      ++H
Sbjct: 170 ESSSFMFLVFDLMRKGELFDYLTE---KVALSEKETRSIMRSLLEAVSFLHAN---NIVH 223
Query: 492 RDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTR-VVGTVGYLAPEVFSSGRAST-- 548
           RD+K  N+LLD  M  RL DFG +    H +     R + GT GYLAPE+       T  
Sbjct: 224 RDLKPENILLDDNMQIRLSDFGFS---CHLEPGEKLRELCGTPGYLAPEILKCSMDETHP 280
Query: 549 ----QTDVFGFGILILEVLSGRRP 568
               + D++  G+++  +L+G  P
Sbjct: 281 GYGKEVDLWACGVILFTLLAGSPP 304

>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6 In Complex With Sangivamycin Length = 576

Iteration: 1
 Score = 68.2 bits (165), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 46/153 (30%), Positives = 75/153 (49%), Gaps = 6/153 (3%)
Query: 434 KGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRD 493
           K +L LV   M  G L   I+   G         +    ++  G+  LH    +++++RD
Sbjct: 256 KDALCLVLTLMNGGDLKFHIYHM-GQAGFPEARAVFYAAEICCGLEDLHR---ERIVYRD 311
Query: 494 IKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVF 553
           +K  N+LLD   + R+ D GLA     GQ       VGTVGY+APEV  + R +   D +
Sbjct: 312 LKPENILLDDHGHIRISDLGLAVHVPEGQTIKGR--VGTVGYMAPEVVKNERYTFSPDWW 369
Query: 554 GFGILILEVLSGRRPIEEGKPNLVEMVWELMVQ 586
             G L+ E+++G+ P ++ K  +     E +V+
Sbjct: 370 ALGCLLYEMIAGQSPFQQRKKKIKREEVERLVK 402

>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a Double Mutant Length = 328

Iteration: 1
 Score = 68.2 bits (165), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 56/203 (27%), Positives = 100/203 (49%), Gaps = 15/203 (7%)
Query: 389 GAEIAVKRI--SHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMEN 446
           G E+A+K I  +  N    +    E+  +  L H ++V L    + EK +L L+ +Y   
Sbjct: 40  GREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEK-TLYLIMEYASG 98
Query: 447 GSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMN 506
           G +  ++       M   E R +  + + + V Y H+   K+++HRD+K+ N+LLD +MN
Sbjct: 99  GEVFDYLVA--HGRMKEKEARSK-FRQIVSAVQYCHQ---KRIVHRDLKAENLLLDADMN 152
Query: 507 GRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRAS-TQTDVFGFGILILEVLSG 565
            ++ DFG +     G         G   Y APE+F   +    + DV+  G+++  ++SG
Sbjct: 153 IKIADFGFSNEFTVG--GKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG 210
Query: 566 RRPIEEGKPNLVEMVWELMVQGK 588
             P +    NL E+  E +++GK
Sbjct: 211 SLPFD--GQNLKEL-RERVLRGK 230

>pdb|1LGB|A Chain A, Interaction Of A Legume Lectin With The N2 Fragment Of Human Lactotransferrin Or With The Isolated Biantennary Glycopeptide: Role Of The Fucose Moiety Length = 181

Iteration: 1
 Score = 68.2 bits (165), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 46/142 (32%), Positives = 66/142 (46%), Gaps = 3/142 (2%)
Query: 32  GFNSSNLSLYGTATVESRILTLTNSTTFTIGRALYPSKIPTKRPNSSYVYPFSTSFIFAM 91
           G +  NL   G        LTLT +   T+GRALY S I      +  V  F TSF F +
Sbjct: 12  GPDQPNLIFQGDGYTTKERLTLTKAVRNTVGRALYSSPIHIWDSKTGNVANFVTSFTFVI 71
Query: 92  APYKGVLAGHGLVFLFVPFHGIKGATEAQHLGLFNRTNDGNSSNHVFGVEFDVFKNQEFN 151
                     G  F   P    K  T   +LG+FN + D + ++    VEFD F N  ++
Sbjct: 72  DAPNSYNVADGFTFFIAPVD-TKPQTGGGYLGVFN-SKDYDKTSQTVAVEFDTFYNTAWD 129
Query: 152 DID-ENHVGIDVNSLTSVSAHA 172
             + + H+GIDVNS+ S++  +
Sbjct: 130 PSNGDRHIGIDVNSIKSINTKS 151

>pdb|1LGC|A Chain A, Interaction Of A Legume Lectin With The N2 Fragment Of Human Lactotransferrin Or With The Isolated Biantennary Glycopeptide: Role Of The Fucose Moiety Length = 181

Iteration: 1
 Score = 68.2 bits (165), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 46/142 (32%), Positives = 66/142 (46%), Gaps = 3/142 (2%)
Query: 32  GFNSSNLSLYGTATVESRILTLTNSTTFTIGRALYPSKIPTKRPNSSYVYPFSTSFIFAM 91
           G +  NL   G        LTLT +   T+GRALY S I      +  V  F TSF F +
Sbjct: 12  GPDQPNLIFQGDGYTTKERLTLTKAVRNTVGRALYSSPIHIWDSKTGNVANFVTSFTFVI 71
Query: 92  APYKGVLAGHGLVFLFVPFHGIKGATEAQHLGLFNRTNDGNSSNHVFGVEFDVFKNQEFN 151
                     G  F   P    K  T   +LG+FN + D + ++    VEFD F N  ++
Sbjct: 72  DAPNSYNVADGFTFFIAPVD-TKPQTGGGYLGVFN-SKDYDKTSQTVAVEFDTFYNTAWD 129
Query: 152 DID-ENHVGIDVNSLTSVSAHA 172
             + + H+GIDVNS+ S++  +
Sbjct: 130 PSNGDRHIGIDVNSIKSINTKS 151

>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate Peptide And Inhibitor Length = 342

Iteration: 1
 Score = 68.2 bits (165), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 50/162 (30%), Positives = 78/162 (48%), Gaps = 9/162 (5%)
Query: 409 LAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERI 468
           L E   L   +H  L  L+ +  +    L  V +Y   G L    F      + S E+R 
Sbjct: 58  LTENRVLQNSRHPFLTALK-YSFQTHDRLCFVMEYANGGEL---FFHLSRERVFS-EDRA 112
Query: 469 RVL-KDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTT 527
           R    ++ + + YLH   EK V++RD+K  N++LDK+ + ++ DFGL +  G    A+  
Sbjct: 113 RFYGAEIVSALDYLHS--EKNVVYRDLKLENLMLDKDGHIKITDFGLCK-EGIKDGATMK 169
Query: 528 RVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPI 569
              GT  YLAPEV          D +G G+++ E++ GR P 
Sbjct: 170 XFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 211

>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor Length = 341

Iteration: 1
 Score = 68.2 bits (165), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 50/162 (30%), Positives = 78/162 (48%), Gaps = 9/162 (5%)
Query: 409 LAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERI 468
           L E   L   +H  L  L+ +  +    L  V +Y   G L    F      + S E+R 
Sbjct: 57  LTENRVLQNSRHPFLTALK-YSFQTHDRLCFVMEYANGGEL---FFHLSRERVFS-EDRA 111
Query: 469 RVL-KDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTT 527
           R    ++ + + YLH   EK V++RD+K  N++LDK+ + ++ DFGL +  G    A+  
Sbjct: 112 RFYGAEIVSALDYLHS--EKNVVYRDLKLENLMLDKDGHIKITDFGLCK-EGIKDGATMK 168
Query: 528 RVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPI 569
              GT  YLAPEV          D +G G+++ E++ GR P 
Sbjct: 169 XFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 210

>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In Complex With A Diaminopyrimidine Carboxamide Inhibitor Length = 277

Iteration: 1
 Score = 67.8 bits (164), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 49/164 (29%), Positives = 88/164 (53%), Gaps = 11/164 (6%)
Query: 408 FLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEER 467
            LAE + + +L +  +V + G C+ E  S MLV +  E G L+K++ Q   +  +  +  
Sbjct: 59  LLAEANVMQQLDNPYIVRMIGICEAE--SWMLVMEMAELGPLNKYLQQ---NRHVKDKNI 113
Query: 468 IRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTT 527
           I ++  V+ G+ YL E      +HRD+ + NVLL  +   ++ DFGL++     +     
Sbjct: 114 IELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENXYKA 170
Query: 528 RVVGT--VGYLAPEVFSSGRASTQTDVFGFGILILEVLS-GRRP 568
           +  G   V + APE  +  + S+++DV+ FG+L+ E  S G++P
Sbjct: 171 QTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 214

>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase Catalytic Subunit From Saccharomyces Cerevisiae Length = 318

Iteration: 1
 Score = 67.8 bits (164), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 55/183 (30%), Positives = 87/183 (47%), Gaps = 31/183 (16%)
Query: 392 IAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDK 451
           + +K++ H ND        E   L  + H  ++ + G   ++   + ++ DY+E G L  
Sbjct: 45  VRLKQVEHTND--------ERLMLSIVTHPFIIRMWG-TFQDAQQIFMIMDYIEGGEL-- 93
Query: 452 WIFQCDGSMMLSCEERIR--VLKDVAAGVL----YLHEGWEKKVLHRDIKSSNVLLDKEM 505
                    +L   +R    V K  AA V     YLH    K +++RD+K  N+LLDK  
Sbjct: 94  -------FSLLRKSQRFPNPVAKFYAAEVCLALEYLHS---KDIIYRDLKPENILLDKNG 143
Query: 506 NGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSG 565
           + ++ DFG A+         T  + GT  Y+APEV S+   +   D + FGILI E+L+G
Sbjct: 144 HIKITDFGFAKYVPD----VTYXLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAG 199
Query: 566 RRP 568
             P
Sbjct: 200 YTP 202

>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain Length = 306

Iteration: 1
 Score = 67.8 bits (164), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 48/191 (25%), Positives = 99/191 (51%), Gaps = 18/191 (9%)
Query: 392 IAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDK 451
           +AVK +   ++   + F  E   L  L+H+ +V   G C  E   L++V++YM +G L++
Sbjct: 51  VAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCT-EGRPLLMVFEYMRHGDLNR 109
Query: 452 WIFQ--CDGSMMLSCE----------ERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNV 499
           ++     D  ++   E          + + V   VAAG++YL        +HRD+ + N 
Sbjct: 110 FLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAG---LHFVHRDLATRNC 166
Query: 500 LLDKEMNGRLGDFGLAR-MHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGIL 558
           L+ + +  ++GDFG++R ++         R +  + ++ PE     + +T++DV+ FG++
Sbjct: 167 LVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVV 226
Query: 559 ILEVLS-GRRP 568
           + E+ + G++P
Sbjct: 227 LWEIFTYGKQP 237

>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2- Phenylaminopyrimidines As Potent Inhibitors Of Spleen Tyrosine Kinase (Syk) Length = 291

Iteration: 1
 Score = 67.8 bits (164), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 49/164 (29%), Positives = 88/164 (53%), Gaps = 11/164 (6%)
Query: 408 FLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEER 467
            LAE + + +L +  +V + G C+ E  S MLV +  E G L+K++ Q   +  +  +  
Sbjct: 73  LLAEANVMQQLDNPYIVRMIGICEAE--SWMLVMEMAELGPLNKYLQQ---NRHVKDKNI 127
Query: 468 IRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTT 527
           I ++  V+ G+ YL E      +HRD+ + NVLL  +   ++ DFGL++     +     
Sbjct: 128 IELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKA 184
Query: 528 RVVGT--VGYLAPEVFSSGRASTQTDVFGFGILILEVLS-GRRP 568
           +  G   V + APE  +  + S+++DV+ FG+L+ E  S G++P
Sbjct: 185 QTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 228

>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Human Insulin Receptor Length = 306

Iteration: 1
 Score = 67.8 bits (164), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 66/266 (24%), Positives = 124/266 (46%), Gaps = 32/266 (12%)
Query: 388 GGAE--IAVKRISHENDGGTR-AFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYM 444
           G AE  +AVK ++       R  FL E S +       +V L G   + + +L +V + M
Sbjct: 44  GEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTL-VVMELM 102
Query: 445 ENGSLDKWIFQC-------DGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSS 497
            +G L  ++           G    + +E I++  ++A G+ YL+    KK +HRD+ + 
Sbjct: 103 AHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNA---KKFVHRDLAAR 159
Query: 498 NVLLDKEMNGRLGDFGLAR-MHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFG 556
           N ++  +   ++GDFG+ R ++         + +  V ++APE    G  +T +D++ FG
Sbjct: 160 NCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFG 219
Query: 557 ILILEVLSGRRPIEEGKPNLVEMVWELMVQGKXXXXXXXXXXXKGGFDEDE--VERVLHL 614
           +++ E+ S      +G  N  E V + ++ G             G  D+ +   ERV  L
Sbjct: 220 VVLWEITSLAEQPYQGLSN--EQVLKFVMDG-------------GYLDQPDNCPERVTDL 264
Query: 615 GLLCAYPDPRARPTMRQVVKVLEGKI 640
             +C   +P+ RPT  ++V +L+  +
Sbjct: 265 MRMCWQFNPKMRPTFLEIVNLLKDDL 290

>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363 Length = 340

Iteration: 1
 Score = 67.8 bits (164), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 50/162 (30%), Positives = 78/162 (48%), Gaps = 9/162 (5%)
Query: 409 LAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERI 468
           L E   L   +H  L  L+ +  +    L  V +Y   G L    F      + S E+R 
Sbjct: 56  LTENRVLQNSRHPFLTALK-YSFQTHDRLCFVMEYANGGEL---FFHLSRERVFS-EDRA 110
Query: 469 RVL-KDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTT 527
           R    ++ + + YLH   EK V++RD+K  N++LDK+ + ++ DFGL +  G    A+  
Sbjct: 111 RFYGAEIVSALDYLHS--EKNVVYRDLKLENLMLDKDGHIKITDFGLCK-EGIKDGATMK 167
Query: 528 RVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPI 569
              GT  YLAPEV          D +G G+++ E++ GR P 
Sbjct: 168 XFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 209

>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To Appcp From D. Discoideum Length = 287

Iteration: 1
 Score = 67.8 bits (164), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 55/241 (22%), Positives = 108/241 (44%), Gaps = 34/241 (14%)
Query: 406 RAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCE 465
           + F  E+  +  L H ++V L G          +V +++  G L   +   D +  +   
Sbjct: 68  QEFQREVFIMSNLNHPNIVKLYGLMHNPP---RMVMEFVPCGDLYHRLL--DKAHPIKWS 122
Query: 466 ERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLL-----DKEMNGRLGDFGLARMHGH 520
            ++R++ D+A G+ Y+ +     ++HRD++S N+ L     +  +  ++ DFGL++   H
Sbjct: 123 VKLRLMLDIALGIEYM-QNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQSVH 181
Query: 521 GQVASTTRVVGTVGYLAPEVFSSGRAS--TQTDVFGFGILILEVLSGRRPIEE---GKPN 575
               S + ++G   ++APE   +   S   + D + F +++  +L+G  P +E   GK  
Sbjct: 182 ----SVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIK 237
Query: 576 LVEMVWELMVQGKXXXXXXXXXXXKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKV 635
            + M+ E                 +    ED   R+ ++  LC   DP+ RP    +VK 
Sbjct: 238 FINMIRE--------------EGLRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKE 283
Query: 636 L 636
           L
Sbjct: 284 L 284

>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka Length = 300

Iteration: 1
 Score = 67.8 bits (164), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 48/191 (25%), Positives = 99/191 (51%), Gaps = 18/191 (9%)
Query: 392 IAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDK 451
           +AVK +   ++   + F  E   L  L+H+ +V   G C  E   L++V++YM +G L++
Sbjct: 45  VAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCT-EGRPLLMVFEYMRHGDLNR 103
Query: 452 WIFQ--CDGSMMLSCE----------ERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNV 499
           ++     D  ++   E          + + V   VAAG++YL        +HRD+ + N 
Sbjct: 104 FLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAG---LHFVHRDLATRNC 160
Query: 500 LLDKEMNGRLGDFGLAR-MHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGIL 558
           L+ + +  ++GDFG++R ++         R +  + ++ PE     + +T++DV+ FG++
Sbjct: 161 LVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVV 220
Query: 559 ILEVLS-GRRP 568
           + E+ + G++P
Sbjct: 221 LWEIFTYGKQP 231

>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii (Tgcdpk1) Length = 484

Iteration: 1
 Score = 67.8 bits (164), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 57/187 (30%), Positives = 95/187 (50%), Gaps = 18/187 (9%)
Query: 389 GAEIAVKRISH---ENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYME 445
           G E AVK IS    +      + L E+  L +L H +++ L  + + +KG   LV +   
Sbjct: 51  GQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFE-DKGYFYLVGEVYT 109
Query: 446 NGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLD--- 502
            G L   I         S  +  R+++ V +G+ Y+H+    K++HRD+K  N+LL+   
Sbjct: 110 GGELFDEII---SRKRFSEVDAARIIRQVLSGITYMHKN---KIVHRDLKPENLLLESKS 163
Query: 503 KEMNGRLGDFGLARMHGHGQVASTTR-VVGTVGYLAPEVFSSGRASTQTDVFGFGILILE 561
           K+ N R+ DFGL+    H + +   +  +GT  Y+APEV   G    + DV+  G+++  
Sbjct: 164 KDANIRIIDFGLS---THFEASKKMKDKIGTAYYIAPEVL-HGTYDEKCDVWSTGVILYI 219
Query: 562 VLSGRRP 568
           +LSG  P
Sbjct: 220 LLSGCPP 226

>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric Inhibitor Length = 446

Iteration: 1
 Score = 67.8 bits (164), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 50/162 (30%), Positives = 78/162 (48%), Gaps = 9/162 (5%)
Query: 409 LAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERI 468
           L E   L   +H  L  L+ +  +    L  V +Y   G L    F      + S E+R 
Sbjct: 199 LTENRVLQNSRHPFLTALK-YSFQTHDRLCFVMEYANGGEL---FFHLSRERVFS-EDRA 253
Query: 469 RVL-KDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTT 527
           R    ++ + + YLH   EK V++RD+K  N++LDK+ + ++ DFGL +  G    A+  
Sbjct: 254 RFYGAEIVSALDYLHS--EKNVVYRDLKLENLMLDKDGHIKITDFGLCK-EGIKDGATMK 310
Query: 528 RVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPI 569
              GT  YLAPEV          D +G G+++ E++ GR P 
Sbjct: 311 TFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 352

>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23 Length = 329

Iteration: 1
 Score = 67.8 bits (164), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 48/191 (25%), Positives = 99/191 (51%), Gaps = 18/191 (9%)
Query: 392 IAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDK 451
           +AVK +   ++   + F  E   L  L+H+ +V   G C  E   L++V++YM +G L++
Sbjct: 74  VAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCT-EGRPLLMVFEYMRHGDLNR 132
Query: 452 WIFQ--CDGSMMLSCE----------ERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNV 499
           ++     D  ++   E          + + V   VAAG++YL        +HRD+ + N 
Sbjct: 133 FLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAG---LHFVHRDLATRNC 189
Query: 500 LLDKEMNGRLGDFGLAR-MHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGIL 558
           L+ + +  ++GDFG++R ++         R +  + ++ PE     + +T++DV+ FG++
Sbjct: 190 LVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVV 249
Query: 559 ILEVLS-GRRP 568
           + E+ + G++P
Sbjct: 250 LWEIFTYGKQP 260

>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex With N-(4- (5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h- Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide Length = 446

Iteration: 1
 Score = 67.8 bits (164), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 50/162 (30%), Positives = 78/162 (48%), Gaps = 9/162 (5%)
Query: 409 LAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERI 468
           L E   L   +H  L  L+ +  +    L  V +Y   G L    F      + S E+R 
Sbjct: 196 LTENRVLQNSRHPFLTALK-YSFQTHDRLCFVMEYANGGEL---FFHLSRERVFS-EDRA 250
Query: 469 RVL-KDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTT 527
           R    ++ + + YLH   EK V++RD+K  N++LDK+ + ++ DFGL +  G    A+  
Sbjct: 251 RFYGAEIVSALDYLHS--EKNVVYRDLKLENLMLDKDGHIKITDFGLCK-EGIKDGATMK 307
Query: 528 RVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPI 569
              GT  YLAPEV          D +G G+++ E++ GR P 
Sbjct: 308 TFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 349

>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In Complex With A Diaminopyrimidine Carboxamide Inhibitor Length = 277

Iteration: 1
 Score = 67.8 bits (164), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 49/164 (29%), Positives = 88/164 (53%), Gaps = 11/164 (6%)
Query: 408 FLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEER 467
            LAE + + +L +  +V + G C+ E  S MLV +  E G L+K++ Q   +  +  +  
Sbjct: 59  LLAEANVMQQLDNPYIVRMIGICEAE--SWMLVMEMAELGPLNKYLQQ---NRHVKDKNI 113
Query: 468 IRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTT 527
           I ++  V+ G+ YL E      +HRD+ + NVLL  +   ++ DFGL++     +     
Sbjct: 114 IELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKA 170
Query: 528 RVVGT--VGYLAPEVFSSGRASTQTDVFGFGILILEVLS-GRRP 568
           +  G   V + APE  +  + S+++DV+ FG+L+ E  S G++P
Sbjct: 171 QTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 214

>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine Length = 353

Iteration: 1
 Score = 67.8 bits (164), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 52/171 (30%), Positives = 82/171 (47%), Gaps = 12/171 (7%)
Query: 412 ISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVL 471
           I SL R  H  L  L   C +    L  V +++  G L   +F    S     E R R  
Sbjct: 76  ILSLAR-NHPFLTQL-FCCFQTPDRLFFVMEFVNGGDL---MFHIQKSRRFD-EARARFY 129
Query: 472 K-DVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRVV 530
             ++ + +++LH+   K +++RD+K  NVLLD E + +L DFG+ +  G     +T    
Sbjct: 130 AAEIISALMFLHD---KGIIYRDLKLDNVLLDHEGHCKLADFGMCK-EGICNGVTTATFC 185
Query: 531 GTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIE-EGKPNLVEMV 580
           GT  Y+APE+          D +  G+L+ E+L G  P E E + +L E +
Sbjct: 186 GTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAI 236

>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In Complex With A Selective Darpin Length = 315

Iteration: 1
 Score = 67.8 bits (164), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 49/161 (30%), Positives = 83/161 (51%), Gaps = 10/161 (6%)
Query: 411 EISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRV 470
           EIS    L H+ +VG  G+ + +   + +V +     SL +   +      L+  E    
Sbjct: 71  EISIHRSLAHQHVVGFHGFFE-DNDFVFVVLELCRRRSLLELHKR---RKALTEPEARYY 126
Query: 471 LKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLA-RMHGHGQVASTTRV 529
           L+ +  G  YLH     +V+HRD+K  N+ L++++  ++GDFGLA ++   G+   T  +
Sbjct: 127 LRQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKT--L 181
Query: 530 VGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIE 570
            GT  Y+APEV S    S + DV+  G ++  +L G+ P E
Sbjct: 182 CGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFE 222

>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain Length = 291

Iteration: 1
 Score = 67.4 bits (163), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 49/164 (29%), Positives = 88/164 (53%), Gaps = 11/164 (6%)
Query: 408 FLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEER 467
            LAE + + +L +  +V + G C+ E  S MLV +  E G L+K++ Q   +  +  +  
Sbjct: 65  LLAEANVMQQLDNPYIVRMIGICEAE--SWMLVMEMAELGPLNKYLQQ---NRHVKDKNI 119
Query: 468 IRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTT 527
           I ++  V+ G+ YL E      +HRD+ + NVLL  +   ++ DFGL++     +     
Sbjct: 120 IELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKA 176
Query: 528 RVVGT--VGYLAPEVFSSGRASTQTDVFGFGILILEVLS-GRRP 568
           +  G   V + APE  +  + S+++DV+ FG+L+ E  S G++P
Sbjct: 177 QTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 220

>pdb|2B7Y|A Chain A, Fava Bean Lectin-Glucose Complex Length = 182

Iteration: 1
 Score = 67.4 bits (163), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 45/140 (32%), Positives = 65/140 (46%), Gaps = 3/140 (2%)
Query: 34  NSSNLSLYGTATVESRILTLTNSTTFTIGRALYPSKIPTKRPNSSYVYPFSTSFIFAMAP 93
           +  NL   G        LTLT +   T+GRALY   I      +  V  F+T+FIF +  
Sbjct: 15  DQPNLIFQGGGYTTKEKLTLTKAVKNTVGRALYSLPIHIWDSETGNVADFTTTFIFVIDA 74
Query: 94  YKGVLAGHGLVFLFVPFHGIKGATEAQHLGLFNRTNDGNSSNHVFGVEFDVFKNQEFNDI 153
             G     G  F   P    K  T   +LG+FN   D + +     VEFD F N  ++  
Sbjct: 75  PNGYNVADGFTFFIAPVD-TKPQTGGGYLGVFN-GKDYDKTAQTVAVEFDTFYNAAWDPS 132
Query: 154 D-ENHVGIDVNSLTSVSAHA 172
           + + H+GIDVN++ S+S  +
Sbjct: 133 NGKRHIGIDVNTIKSISTKS 152

>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk Activation Switch Length = 635

Iteration: 1
 Score = 67.4 bits (163), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 49/164 (29%), Positives = 88/164 (53%), Gaps = 11/164 (6%)
Query: 408 FLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEER 467
            LAE + + +L +  +V + G C+ E  S MLV +  E G L+K++ Q   +  +  +  
Sbjct: 417 LLAEANVMQQLDNPYIVRMIGICEAE--SWMLVMEMAELGPLNKYLQQ---NRHVKDKNI 471
Query: 468 IRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTT 527
           I ++  V+ G+ YL E      +HRD+ + NVLL  +   ++ DFGL++     +     
Sbjct: 472 IELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKA 528
Query: 528 RVVGT--VGYLAPEVFSSGRASTQTDVFGFGILILEVLS-GRRP 568
           +  G   V + APE  +  + S+++DV+ FG+L+ E  S G++P
Sbjct: 529 QTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 572

>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With Nms-P937 Length = 311

Iteration: 1
 Score = 67.4 bits (163), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 49/161 (30%), Positives = 83/161 (51%), Gaps = 10/161 (6%)
Query: 411 EISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRV 470
           EIS    L H+ +VG  G+ + +   + +V +     SL +   +      L+  E    
Sbjct: 67  EISIHRSLAHQHVVGFHGFFE-DNDFVFVVLELCRRRSLLELHKR---RKALTEPEARYY 122
Query: 471 LKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLA-RMHGHGQVASTTRV 529
           L+ +  G  YLH     +V+HRD+K  N+ L++++  ++GDFGLA ++   G+   T  +
Sbjct: 123 LRQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKT--L 177
Query: 530 VGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIE 570
            GT  Y+APEV S    S + DV+  G ++  +L G+ P E
Sbjct: 178 CGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFE 218

>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With Gleevec Length = 292

Iteration: 1
 Score = 67.4 bits (163), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 44/173 (25%), Positives = 87/173 (50%), Gaps = 6/173 (3%)
Query: 392 IAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDK 451
           +AVK +  E+      FL E + +  +KH +LV L G C  E     +V +YM  G+L  
Sbjct: 60  VAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTLEP-PFYIVTEYMPYGNLLD 117
Query: 452 WIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGD 511
           ++ +C+   + +    + +   +++ + YL +   K  +HRD+ + N L+ +    ++ D
Sbjct: 118 YLRECNREEVTAVV-LLYMATQISSAMEYLEK---KNFIHRDLAARNCLVGENHVVKVAD 173
Query: 512 FGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLS 564
           FGL+R+       +       + + APE  +    S ++DV+ FG+L+ E+ +
Sbjct: 174 FGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIAT 226

>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A Pyrazoloquinazoline Inhibitor Length = 311

Iteration: 1
 Score = 67.4 bits (163), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 49/161 (30%), Positives = 83/161 (51%), Gaps = 10/161 (6%)
Query: 411 EISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRV 470
           EIS    L H+ +VG  G+ + +   + +V +     SL +   +      L+  E    
Sbjct: 67  EISIHRSLAHQHVVGFHGFFE-DNDFVFVVLELCRRRSLLELHKR---RKALTEPEARYY 122
Query: 471 LKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLA-RMHGHGQVASTTRV 529
           L+ +  G  YLH     +V+HRD+K  N+ L++++  ++GDFGLA ++   G+   T  +
Sbjct: 123 LRQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKT--L 177
Query: 530 VGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIE 570
            GT  Y+APEV S    S + DV+  G ++  +L G+ P E
Sbjct: 178 CGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFE 218

>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With A Sulfonamidopyrazine Piperidine Inhibitor Length = 274

Iteration: 1
 Score = 67.4 bits (163), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 49/164 (29%), Positives = 88/164 (53%), Gaps = 11/164 (6%)
Query: 408 FLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEER 467
            LAE + + +L +  +V + G C+ E  S MLV +  E G L+K++ Q   +  +  +  
Sbjct: 55  LLAEANVMQQLDNPYIVRMIGICEAE--SWMLVMEMAELGPLNKYLQQ---NRHVKDKNI 109
Query: 468 IRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTT 527
           I ++  V+ G+ YL E      +HRD+ + NVLL  +   ++ DFGL++     +     
Sbjct: 110 IELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKA 166
Query: 528 RVVGT--VGYLAPEVFSSGRASTQTDVFGFGILILEVLS-GRRP 568
           +  G   V + APE  +  + S+++DV+ FG+L+ E  S G++P
Sbjct: 167 QTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 210

>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk Activation Switch Length = 636

Iteration: 1
 Score = 67.4 bits (163), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 49/164 (29%), Positives = 88/164 (53%), Gaps = 11/164 (6%)
Query: 408 FLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEER 467
            LAE + + +L +  +V + G C+ E  S MLV +  E G L+K++ Q   +  +  +  
Sbjct: 418 LLAEANVMQQLDNPYIVRMIGICEAE--SWMLVMEMAELGPLNKYLQQ---NRHVKDKNI 472
Query: 468 IRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTT 527
           I ++  V+ G+ YL E      +HRD+ + NVLL  +   ++ DFGL++     +     
Sbjct: 473 IELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKA 529
Query: 528 RVVGT--VGYLAPEVFSSGRASTQTDVFGFGILILEVLS-GRRP 568
           +  G   V + APE  +  + S+++DV+ FG+L+ E  S G++P
Sbjct: 530 QTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 573

>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1 Length = 297

Iteration: 1
 Score = 67.4 bits (163), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 50/184 (27%), Positives = 94/184 (51%), Gaps = 17/184 (9%)
Query: 389 GAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVG-LRGWCKREKGSLMLVYDYMENG 447
           G E+A+++++ +        + EI  +   K+ ++V  L  +   ++  L +V +Y+  G
Sbjct: 45  GQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDE--LWVVMEYLAGG 102
Query: 448 SLDKWIFQ-C--DGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKE 504
           SL   + + C  +G +   C E ++ L+       +LH     +V+HRDIKS N+LL  +
Sbjct: 103 SLTDVVTETCMDEGQIAAVCRECLQALE-------FLHSN---QVIHRDIKSDNILLGMD 152
Query: 505 MNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLS 564
            + +L DFG        Q   +T +VGT  ++APEV +      + D++  GI+ +E++ 
Sbjct: 153 GSVKLTDFGFCAQITPEQSKRST-MVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIE 211
Query: 565 GRRP 568
           G  P
Sbjct: 212 GEPP 215

>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3, Stk24) Length = 304

Iteration: 1
 Score = 67.4 bits (163), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 39/105 (37%), Positives = 59/105 (56%), Gaps = 4/105 (3%)
Query: 470 VLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRV 529
           +L+++  G+ YLH   EKK+ HRDIK++NVLL +    +L DFG+A      Q+   T  
Sbjct: 109 ILREILKGLDYLHS--EKKI-HRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNT-F 164
Query: 530 VGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKP 574
           VGT  ++APEV       ++ D++  GI  +E+  G  P  E  P
Sbjct: 165 VGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHP 209

>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836 Length = 273

Iteration: 1
 Score = 67.4 bits (163), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 49/164 (29%), Positives = 88/164 (53%), Gaps = 11/164 (6%)
Query: 408 FLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEER 467
            LAE + + +L +  +V + G C+ E  S MLV +  E G L+K++ Q   +  +  +  
Sbjct: 53  LLAEANVMQQLDNPYIVRMIGICEAE--SWMLVMEMAELGPLNKYLQQ---NRHVKDKNI 107
Query: 468 IRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTT 527
           I ++  V+ G+ YL E      +HRD+ + NVLL  +   ++ DFGL++     +     
Sbjct: 108 IELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKA 164
Query: 528 RVVGT--VGYLAPEVFSSGRASTQTDVFGFGILILEVLS-GRRP 568
           +  G   V + APE  +  + S+++DV+ FG+L+ E  S G++P
Sbjct: 165 QTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 208

>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In Complex With Ch4987655 And Mgamp-Pnp Length = 307

Iteration: 1
 Score = 67.4 bits (163), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 59/207 (28%), Positives = 103/207 (49%), Gaps = 26/207 (12%)
Query: 389 GAEIAVKRISHENDGGTR-AFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENG 447
           G  +A K I  E     R   + E+  L       +VG  G    + G + +  ++M+ G
Sbjct: 31  GLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSD-GEISICMEHMDGG 89
Query: 448 SLDKWIFQCDGSMMLSCEERI--RVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEM 505
           SLD+ + +  G +     E+I  +V   V  G+ YL E  + K++HRD+K SN+L++   
Sbjct: 90  SLDQ-VLKKAGRI----PEQILGKVSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRG 142
Query: 506 NGRLGDFGLARMHGHGQVAST--TRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVL 563
             +L DFG++     GQ+  +     VGT  Y++PE       S Q+D++  G+ ++E+ 
Sbjct: 143 EIKLCDFGVS-----GQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMA 197
Query: 564 SGRRPI------EEGKPNLVEMVWELM 584
            GR PI      E+ +P +   ++EL+
Sbjct: 198 VGRYPIPPPDAKEDSRPPMA--IFELL 222

>pdb|1N3O|A Chain A, Pterocarcpus Angolensis Lectin In Complex With Alpha-Methyl Glucose Length = 252

Iteration: 1
 Score = 67.4 bits (163), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 75/268 (27%), Positives = 121/268 (45%), Gaps = 49/268 (18%)
Query: 25  AVDFVFNGFNSS--NLSLYGTATVESRILTLT------NSTTFTIGRALYPSKIPTKRPN 76
           ++ F F  F S   NL   G A +++  + LT      N    T+GR L+ +++     +
Sbjct: 3   SLSFGFPTFPSDQKNLIFQGDAQIKNNAVQLTKTDSNGNPVASTVGRILFSAQVHLWEKS 62
Query: 77  SSYVYPFSTSFIFAM-APYKGVLAGHGLVFLFVPFHG-IKGATEAQHLGLFNR-TNDGNS 133
           SS V  F + F F++ +P        G+ F   P    I   +    LGLF   T    S
Sbjct: 63  SSRVANFQSQFSFSLKSPLSN--GADGIAFFIAPPDTTIPSGSGGGLLGLFAPGTAQNTS 120
Query: 134 SNHVFGVEFDVFKNQEFNDIDEN--HVGIDVNSLTSVSAHAAGYWPDNQXXXXXXXXXXX 191
           +N V  VEFD F  Q+ N  D N  H+GIDVNS+ SV                       
Sbjct: 121 ANQVIAVEFDTFYAQDSNTWDPNYPHIGIDVNSIRSV----------------------- 157
Query: 192 XXXXEKSFKELKLN--NGKNYQVWIDYADSFINITMVEAGMKRPKRPLLSVPLNLSGVLE 249
                   K +K +  +G++  V + +  S  N+ +V A      R  +S  +++  VL 
Sbjct: 158 --------KTVKWDRRDGQSLNVLVTFNPSTRNLDVV-ATYSDGTRYEVSYEVDVRSVLP 208
Query: 250 DEMYVGFTAATGQLVESHKILAWSFSNT 277
           + + VGF+AA+G+  ++H + +WSF++T
Sbjct: 209 EWVRVGFSAASGEQYQTHTLESWSFTST 236

>pdb|1Q8O|A Chain A, Pterocartpus Angolensis Lectin Pal In Complex With The Dimmanoside Man(Alpha1-2)man Length = 252

Iteration: 1
 Score = 67.4 bits (163), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 75/268 (27%), Positives = 121/268 (45%), Gaps = 49/268 (18%)
Query: 25  AVDFVFNGFNSS--NLSLYGTATVESRILTLT------NSTTFTIGRALYPSKIPTKRPN 76
           ++ F F  F S   NL   G A +++  + LT      N    T+GR L+ +++     +
Sbjct: 3   SLSFGFPTFPSDQKNLIFQGDAQIKNNAVQLTKTDSNGNPVASTVGRILFSAQVHLWEKS 62
Query: 77  SSYVYPFSTSFIFAM-APYKGVLAGHGLVFLFVPFHG-IKGATEAQHLGLFNR-TNDGNS 133
           SS V  F + F F++ +P        G+ F   P    I   +    LGLF   T    S
Sbjct: 63  SSRVANFQSQFSFSLKSPLSN--GADGIAFFIAPPDTTIPSGSGGGLLGLFAPGTAQNTS 120
Query: 134 SNHVFGVEFDVFKNQEFNDIDEN--HVGIDVNSLTSVSAHAAGYWPDNQXXXXXXXXXXX 191
           +N V  VEFD F  Q+ N  D N  H+GIDVNS+ SV                       
Sbjct: 121 ANQVIAVEFDTFYAQDSNTWDPNYPHIGIDVNSIRSV----------------------- 157
Query: 192 XXXXEKSFKELKLN--NGKNYQVWIDYADSFINITMVEAGMKRPKRPLLSVPLNLSGVLE 249
                   K +K +  +G++  V + +  S  N+ +V A      R  +S  +++  VL 
Sbjct: 158 --------KTVKWDRRDGQSLNVLVTFNPSTRNLDVV-ATYSDGTRYEVSYEVDVRSVLP 208
Query: 250 DEMYVGFTAATGQLVESHKILAWSFSNT 277
           + + VGF+AA+G+  ++H + +WSF++T
Sbjct: 209 EWVRVGFSAASGEQYQTHTLESWSFTST 236

>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of Triazine Derivatives As Potent, Selective Tie-2 Inhibitors Length = 317

Iteration: 1
 Score = 67.0 bits (162), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 52/196 (26%), Positives = 100/196 (51%), Gaps = 25/196 (12%)
Query: 386 EGGGAEIAVKRIS-HENDGGTRAFLAEISSLGRL-KHKSLVGLRGWCKREKGSLMLVYDY 443
           +G   + A+KR+  + +    R F  E+  L +L  H +++ L G C+  +G L L  +Y
Sbjct: 39  DGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACE-HRGYLYLAIEY 97
Query: 444 MENGSLDKW-----IFQCDGSM--------MLSCEERIRVLKDVAAGVLYLHEGWEKKVL 490
             +G+L  +     + + D +          LS ++ +    DVA G+ YL +   K+ +
Sbjct: 98  APHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQ---KQFI 154
Query: 491 HRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRVVG--TVGYLAPEVFSSGRAST 548
           HRD+ + N+L+ +    ++ DFGL+R    GQ     + +G   V ++A E  +    +T
Sbjct: 155 HRDLAARNILVGENYVAKIADFGLSR----GQEVYVKKTMGRLPVRWMAIESLNYSVYTT 210
Query: 549 QTDVFGFGILILEVLS 564
            +DV+ +G+L+ E++S
Sbjct: 211 NSDVWSYGVLLWEIVS 226

>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N- Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2 Length = 325

Iteration: 1
 Score = 67.0 bits (162), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 47/157 (29%), Positives = 84/157 (53%), Gaps = 10/157 (6%)
Query: 415 LGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDV 474
           L  + H  +V L  +  + +G L L+ D++  G L     +    +M + E+    L ++
Sbjct: 80  LVEVNHPFIVKLH-YAFQTEGKLYLILDFLRGGDL---FTRLSKEVMFTEEDVKFYLAEL 135
Query: 475 AAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMH-GHGQVASTTRVVGTV 533
           A  + +LH      +++RD+K  N+LLD+E + +L DFGL++    H + A +    GTV
Sbjct: 136 ALALDHLHS---LGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYS--FCGTV 190
Query: 534 GYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIE 570
            Y+APEV +    +   D + FG+L+ E+L+G  P +
Sbjct: 191 EYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQ 227

>pdb|1FVR|A Chain A, Tie2 Kinase Domain Length = 327

Iteration: 1
 Score = 67.0 bits (162), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 52/196 (26%), Positives = 100/196 (51%), Gaps = 25/196 (12%)
Query: 386 EGGGAEIAVKRIS-HENDGGTRAFLAEISSLGRL-KHKSLVGLRGWCKREKGSLMLVYDY 443
           +G   + A+KR+  + +    R F  E+  L +L  H +++ L G C+  +G L L  +Y
Sbjct: 49  DGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACE-HRGYLYLAIEY 107
Query: 444 MENGSLDKW-----IFQCDGSM--------MLSCEERIRVLKDVAAGVLYLHEGWEKKVL 490
             +G+L  +     + + D +          LS ++ +    DVA G+ YL +   K+ +
Sbjct: 108 APHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQ---KQFI 164
Query: 491 HRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRVVG--TVGYLAPEVFSSGRAST 548
           HRD+ + N+L+ +    ++ DFGL+R    GQ     + +G   V ++A E  +    +T
Sbjct: 165 HRDLAARNILVGENYVAKIADFGLSR----GQEVYVKKTMGRLPVRWMAIESLNYSVYTT 220
Query: 549 QTDVFGFGILILEVLS 564
            +DV+ +G+L+ E++S
Sbjct: 221 NSDVWSYGVLLWEIVS 236

>pdb|3N35|A Chain A, Erythrina Corallodendron Lectin Mutant (Y106g) With N- Acetylgalactosamine Length = 242

Iteration: 1
 Score = 67.0 bits (162), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 72/262 (27%), Positives = 109/262 (41%), Gaps = 45/262 (17%)
Query: 26  VDFVFNGFN--SSNLSLYGTATV-ESRILTLTN------STTFTIGRALYPSKIPTKRPN 76
           + F F+ F   + NL+L G + + +S +L LT           + GR LY   +      
Sbjct: 4   ISFSFSEFEPGNDNLTLQGASLITQSGVLQLTKINQNGMPAWDSTGRTLYAKPVHIWDMT 63
Query: 77  SSYVYPFSTSFIFAM-APYKGVLAGHGLVFLFVPFHGIKGATEAQHLGLFNRTNDGNSSN 135
           +  V  F T F F++  PY   L   GLVF   P    K A    +LG+FN +   NS  
Sbjct: 64  TGTVASFETRFSFSIEQPYTRPLPADGLVFFMGPTKS-KPAQGGGYLGIFNNSKQDNSY- 121
Query: 136 HVFGVEFDVFKNQEFNDIDENHVGIDVNSLTSVSAHAAGYWPDNQXXXXXXXXXXXXXXX 195
              GVEFD F NQ ++     H+GIDVNS+ S+                           
Sbjct: 122 QTLGVEFDTFSNQ-WDPPQVPHIGIDVNSIRSIKT------------------------- 155
Query: 196 EKSFKELKLNNGKNYQVWIDYADSFINITMVEAGMKRPKRPLLSVPLNLSGVLEDEMYVG 255
               +  +L+NG+   V I Y  S   +  V           ++  +++  VL + + VG
Sbjct: 156 ----QPFQLDNGQVANVVIKYDASSKILHAVLVYPSSGAIYTIAEIVDVKQVLPEWVDVG 211
Query: 256 FTAATG---QLVESHKILAWSF 274
            + ATG      E+H + +WSF
Sbjct: 212 LSGATGAQRDAAETHDVYSWSF 233

>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta Length = 294

Iteration: 1
 Score = 67.0 bits (162), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 39/105 (37%), Positives = 59/105 (56%), Gaps = 4/105 (3%)
Query: 470 VLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRV 529
           +L+++  G+ YLH   EKK+ HRDIK++NVLL +    +L DFG+A      Q+   T  
Sbjct: 129 ILREILKGLDYLHS--EKKI-HRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNT-F 184
Query: 530 VGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKP 574
           VGT  ++APEV       ++ D++  GI  +E+  G  P  E  P
Sbjct: 185 VGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHP 229

>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With Ucb1353770 And Amppnp Length = 304

Iteration: 1
 Score = 67.0 bits (162), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 47/154 (30%), Positives = 85/154 (55%), Gaps = 18/154 (11%)
Query: 435 GSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERI--RVLKDVAAGVLYLHEGWEKKVLHR 492
           G + +  ++M+ GSLD+ + +  G +     E+I  +V   V  G+ YL E  + K++HR
Sbjct: 96  GEISICMEHMDGGSLDQ-VLKKAGRI----PEQILGKVSIAVIKGLTYLRE--KHKIMHR 148
Query: 493 DIKSSNVLLDKEMNGRLGDFGLARMHGHGQVAST--TRVVGTVGYLAPEVFSSGRASTQT 550
           D+K SN+L++     +L DFG++     GQ+  +     VGT  Y++PE       S Q+
Sbjct: 149 DVKPSNILVNSRGEIKLCDFGVS-----GQLIDSMANSFVGTRSYMSPERLQGTHYSVQS 203
Query: 551 DVFGFGILILEVLSGRRPIEEGKPNLVEMVWELM 584
           D++  G+ ++E+  GR PI  G  ++   ++EL+
Sbjct: 204 DIWSMGLSLVEMAVGRYPIGSGSGSMA--IFELL 235

>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex With Staurosporine Length = 287

Iteration: 1
 Score = 67.0 bits (162), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 53/187 (28%), Positives = 95/187 (50%), Gaps = 11/187 (5%)
Query: 391 EIAVKRISHEND-GGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSL 449
           ++A+K +    +   T   + E   + +L +  +V L G C+ E  +LMLV +    G L
Sbjct: 39  DVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQAE--ALMLVMEMAGGGPL 96
Query: 450 DKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRL 509
            K++      + +S      +L  V+ G+ YL E   K  +HRD+ + NVLL      ++
Sbjct: 97  HKFLVGKREEIPVS--NVAELLHQVSMGMKYLEE---KNFVHRDLAARNVLLVNRHYAKI 151
Query: 510 GDFGLARMHGHGQVASTTRVVGT--VGYLAPEVFSSGRASTQTDVFGFGILILEVLS-GR 566
            DFGL++  G      T R  G   + + APE  +  + S+++DV+ +G+ + E LS G+
Sbjct: 152 SDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQ 211
Query: 567 RPIEEGK 573
           +P ++ K
Sbjct: 212 KPYKKMK 218

>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex With Peptide Substrate And Atp Analog Length = 306

Iteration: 1
 Score = 67.0 bits (162), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 66/266 (24%), Positives = 123/266 (46%), Gaps = 32/266 (12%)
Query: 388 GGAE--IAVKRISHENDGGTR-AFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYM 444
           G AE  +AVK ++       R  FL E S +       +V L G   + + +L +V + M
Sbjct: 44  GEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTL-VVMELM 102
Query: 445 ENGSLDKWIFQC-------DGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSS 497
            +G L  ++           G    + +E I++  ++A G+ YL+    KK +HRD+ + 
Sbjct: 103 AHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNA---KKFVHRDLAAR 159
Query: 498 NVLLDKEMNGRLGDFGLAR-MHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFG 556
           N ++  +   ++GDFG+ R +          + +  V ++APE    G  +T +D++ FG
Sbjct: 160 NCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFG 219
Query: 557 ILILEVLSGRRPIEEGKPNLVEMVWELMVQGKXXXXXXXXXXXKGGFDEDE--VERVLHL 614
           +++ E+ S      +G  N  E V + ++ G             G  D+ +   ERV  L
Sbjct: 220 VVLWEITSLAEQPYQGLSN--EQVLKFVMDG-------------GYLDQPDNCPERVTDL 264
Query: 615 GLLCAYPDPRARPTMRQVVKVLEGKI 640
             +C   +P+ RPT  ++V +L+  +
Sbjct: 265 MRMCWQFNPKMRPTFLEIVNLLKDDL 290

>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From Toxoplasma Gondii, Tgme49.101440 Length = 507

Iteration: 1
 Score = 67.0 bits (162), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 57/187 (30%), Positives = 95/187 (50%), Gaps = 18/187 (9%)
Query: 389 GAEIAVKRISH---ENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYME 445
           G E AVK IS    +      + L E+  L +L H +++ L  + + +KG   LV +   
Sbjct: 74  GQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFE-DKGYFYLVGEVYT 132
Query: 446 NGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLD--- 502
            G L   I         S  +  R+++ V +G+ Y+H+    K++HRD+K  N+LL+   
Sbjct: 133 GGELFDEII---SRKRFSEVDAARIIRQVLSGITYMHKN---KIVHRDLKPENLLLESKS 186
Query: 503 KEMNGRLGDFGLARMHGHGQVASTTR-VVGTVGYLAPEVFSSGRASTQTDVFGFGILILE 561
           K+ N R+ DFGL+    H + +   +  +GT  Y+APEV   G    + DV+  G+++  
Sbjct: 187 KDANIRIIDFGLST---HFEASKKMKDKIGTAYYIAPEVL-HGTYDEKCDVWSTGVILYI 242
Query: 562 VLSGRRP 568
           +LSG  P
Sbjct: 243 LLSGCPP 249

>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii, Tgme49_101440, In Presence Of Calcium Length = 508

Iteration: 1
 Score = 67.0 bits (162), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 57/187 (30%), Positives = 95/187 (50%), Gaps = 18/187 (9%)
Query: 389 GAEIAVKRISH---ENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYME 445
           G E AVK IS    +      + L E+  L +L H +++ L  + + +KG   LV +   
Sbjct: 75  GQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFE-DKGYFYLVGEVYT 133
Query: 446 NGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLD--- 502
            G L   I         S  +  R+++ V +G+ Y+H+    K++HRD+K  N+LL+   
Sbjct: 134 GGELFDEII---SRKRFSEVDAARIIRQVLSGITYMHKN---KIVHRDLKPENLLLESKS 187
Query: 503 KEMNGRLGDFGLARMHGHGQVASTTR-VVGTVGYLAPEVFSSGRASTQTDVFGFGILILE 561
           K+ N R+ DFGL+    H + +   +  +GT  Y+APEV   G    + DV+  G+++  
Sbjct: 188 KDANIRIIDFGLST---HFEASKKMKDKIGTAYYIAPEVL-HGTYDEKCDVWSTGVILYI 243
Query: 562 VLSGRRP 568
           +LSG  P
Sbjct: 244 LLSGCPP 250

>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic K641r Mutation Responsible For Pfeiffer Syndrome Length = 324

Iteration: 1
 Score = 67.0 bits (162), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 71/263 (26%), Positives = 124/263 (47%), Gaps = 35/263 (13%)
Query: 392 IAVKRISHENDGGTRAFLAEISSLGRL-----KHKSLVGLRGWCKREKGSLMLVYDYMEN 446
           +AVK +    D  T   L+++ S   +     KHK+++ L G C ++ G L ++ +Y   
Sbjct: 70  VAVKMLK---DDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD-GPLYVIVEYASK 125
Query: 447 GSLDKWIFQCDGSMMLSCEERIRV------LKDVAAGVLYLHEGWE----KKVLHRDIKS 496
           G+L +++       M    +  RV       KD+ +    L  G E    +K +HRD+ +
Sbjct: 126 GNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAA 185
Query: 497 SNVLLDKEMNGRLGDFGLAR-MHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGF 555
            NVL+ +    R+ DFGLAR ++       TT     V ++APE       + Q+DV+ F
Sbjct: 186 RNVLVTENNVMRIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSF 245
Query: 556 GILILEVLS-GRRPIEEGKPNLVEMVWELMVQGKXXXXXXXXXXXKGGFDEDEVERVLHL 614
           G+L+ E+ + G  P   G P  VE +++L+ +G            K     +E+  ++  
Sbjct: 246 GVLMWEIFTLGGSPY-PGIP--VEELFKLLKEGH--------RMDKPANCTNELYMMMR- 293
Query: 615 GLLCAYPDPRARPTMRQVVKVLE 637
              C +  P  RPT +Q+V+ L+
Sbjct: 294 --DCWHAVPSQRPTFKQLVEDLD 314

>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp Analog And Substrate Peptide Length = 334

Iteration: 1
 Score = 66.6 bits (161), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 74/283 (26%), Positives = 130/283 (45%), Gaps = 35/283 (12%)
Query: 392 IAVKRISHENDGGTRAFLAEISSLGRL-----KHKSLVGLRGWCKREKGSLMLVYDYMEN 446
           +AVK +    D  T   L+++ S   +     KHK+++ L G C ++ G L ++ +Y   
Sbjct: 70  VAVKMLK---DDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD-GPLYVIVEYASK 125
Query: 447 GSLDKWIFQCDGSMMLSCEERIRV------LKDVAAGVLYLHEGWE----KKVLHRDIKS 496
           G+L +++       M    +  RV       KD+ +    L  G E    +K +HRD+ +
Sbjct: 126 GNLREYLRARRPPGMEXSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAA 185
Query: 497 SNVLLDKEMNGRLGDFGLAR-MHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGF 555
            NVL+ +    ++ DFGLAR ++       TT     V ++APE       + Q+DV+ F
Sbjct: 186 RNVLVTENNVMKIADFGLARDINNIDXXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSF 245
Query: 556 GILILEVLS-GRRPIEEGKPNLVEMVWELMVQGKXXXXXXXXXXXKGGFDEDEVERVLHL 614
           G+L+ E+ + G  P   G P  VE +++L+ +G            K     +E+  ++  
Sbjct: 246 GVLMWEIFTLGGSPY-PGIP--VEELFKLLKEGH--------RMDKPANCTNELYMMMR- 293
Query: 615 GLLCAYPDPRARPTMRQVVKVLEGKIEAGIENETEDMDAYLLQ 657
              C +  P  RPT +Q+V+ L+  +      E  D+   L Q
Sbjct: 294 --DCWHAVPSQRPTFKQLVEDLDRILTLTTNEEYLDLSQPLEQ 334

>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a Resolution. Length = 352

Iteration: 1
 Score = 66.6 bits (161), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 38/136 (27%), Positives = 68/136 (50%), Gaps = 7/136 (5%)
Query: 434 KGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRD 493
           K +L  V +Y+  G L   ++                  ++  G+ +LH    K +++RD
Sbjct: 91  KENLFFVMEYLNGGDL---MYHIQSCHKFDLSRATFYAAEIILGLQFLHS---KGIVYRD 144
Query: 494 IKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVF 553
           +K  N+LLDK+ + ++ DFG+ + +  G  A T    GT  Y+APE+    + +   D +
Sbjct: 145 LKLDNILLDKDGHIKIADFGMCKENMLGD-AKTNEFCGTPDYIAPEILLGQKYNHSVDWW 203
Query: 554 GFGILILEVLSGRRPI 569
            FG+L+ E+L G+ P 
Sbjct: 204 SFGVLLYEMLIGQSPF 219

>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo Pyridine Inhibitor Length = 317

Iteration: 1
 Score = 66.6 bits (161), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 63/260 (24%), Positives = 121/260 (46%), Gaps = 30/260 (11%)
Query: 392 IAVKRISHENDGGTR-AFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLD 450
           +AVK ++       R  FL E S +       +V L G   + + +L +V + M +G L 
Sbjct: 49  VAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTL-VVMELMAHGDLK 107
Query: 451 KWIFQC-------DGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDK 503
            ++           G    + +E I++  ++A G+ YL+    KK +HRD+ + N ++  
Sbjct: 108 SYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNA---KKFVHRDLAARNCMVAH 164
Query: 504 EMNGRLGDFGLAR-MHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEV 562
           +   ++GDFG+ R ++         + +  V ++APE    G  +T +D++ FG+++ E+
Sbjct: 165 DFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEI 224
Query: 563 LSGRRPIEEGKPNLVEMVWELMVQGKXXXXXXXXXXXKGGFDEDE--VERVLHLGLLCAY 620
            S      +G  N  E V + ++ G             G  D+ +   ERV  L  +C  
Sbjct: 225 TSLAEQPYQGLSN--EQVLKFVMDG-------------GYLDQPDNCPERVTDLMRMCWQ 269
Query: 621 PDPRARPTMRQVVKVLEGKI 640
            +P+ RPT  ++V +L+  +
Sbjct: 270 FNPKMRPTFLEIVNLLKDDL 289

>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point Mutations (K299r, T423e) Length = 297

Iteration: 1
 Score = 66.6 bits (161), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 49/184 (26%), Positives = 94/184 (51%), Gaps = 17/184 (9%)
Query: 389 GAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVG-LRGWCKREKGSLMLVYDYMENG 447
           G E+A+++++ +        + EI  +   K+ ++V  L  +   ++  L +V +Y+  G
Sbjct: 45  GQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDE--LWVVMEYLAGG 102
Query: 448 SLDKWIFQ-C--DGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKE 504
           SL   + + C  +G +   C E ++ L+       +LH     +V+HRDIKS N+LL  +
Sbjct: 103 SLTDVVTETCMDEGQIAAVCRECLQALE-------FLHSN---QVIHRDIKSDNILLGMD 152
Query: 505 MNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLS 564
            + +L DFG        Q +  + +VGT  ++APEV +      + D++  GI+ +E++ 
Sbjct: 153 GSVKLTDFGFCAQITPEQ-SKRSEMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIE 211
Query: 565 GRRP 568
           G  P
Sbjct: 212 GEPP 215

>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase Length = 314

Iteration: 1
 Score = 66.6 bits (161), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 55/190 (28%), Positives = 96/190 (50%), Gaps = 17/190 (8%)
Query: 389 GAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGS 448
           G  +A+K++  E+D   +  + EIS + +     +V   G    +   L +V +Y   GS
Sbjct: 54  GQIVAIKQVPVESD--LQEIIKEISIMQQCDSPHVVKYYG-SYFKNTDLWIVMEYCGAGS 110
Query: 449 LDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGR 508
           +   I   + +  L+ +E   +L+    G+ YLH  + +K+ HRDIK+ N+LL+ E + +
Sbjct: 111 VSDIIRLRNKT--LTEDEIATILQSTLKGLEYLH--FMRKI-HRDIKAGNILLNTEGHAK 165
Query: 509 LGDFGLARMHGHGQV----ASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLS 564
           L DFG+A     GQ+    A    V+GT  ++APEV      +   D++  GI  +E+  
Sbjct: 166 LADFGVA-----GQLTDXMAKRNXVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAE 220
Query: 565 GRRPIEEGKP 574
           G+ P  +  P
Sbjct: 221 GKPPYADIHP 230

>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue Length = 348

Iteration: 1
 Score = 66.6 bits (161), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 47/152 (30%), Positives = 78/152 (51%), Gaps = 17/152 (11%)
Query: 437 LMLVYDYMENGSL---DKWIFQCDGSMMLSCEERIRVLKDVAAGVL----YLHEGWEKKV 489
           + ++Y+YMEN S+   D++ F  D +   +C   I+V+K +   VL    Y+H   EK +
Sbjct: 118 VYIIYEYMENDSILKFDEYFFVLDKNY--TCFIPIQVIKCIIKSVLNSFSYIHN--EKNI 173
Query: 490 LHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFS--SGRAS 547
            HRD+K SN+L+DK    +L DFG +      ++  +    GT  ++ PE FS  S    
Sbjct: 174 CHRDVKPSNILMDKNGRVKLSDFGESEYMVDKKIKGSR---GTYEFMPPEFFSNESSYNG 230
Query: 548 TQTDVFGFGILILEVLSGRRPIEEGKPNLVEM 579
            + D++  GI +  +     P    K +LVE+
Sbjct: 231 AKVDIWSLGICLYVMFYNVVPF-SLKISLVEL 261

>pdb|1SFY|A Chain A, Crystal Structure Of Recombinant Erythrina Corallodandron Lectin Length = 239

Iteration: 1
 Score = 66.6 bits (161), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 73/265 (27%), Positives = 112/265 (42%), Gaps = 51/265 (19%)
Query: 26  VDFVFNGFN--SSNLSLYGTATV-ESRILTLTN------STTFTIGRALYPSKIPTKRPN 76
           + F F+ F   + NL+L G + + +S +L LT           + GR LY   +      
Sbjct: 4   ISFSFSEFEPGNDNLTLQGASLITQSGVLQLTKINQNGMPAWDSTGRTLYAKPVHIWDMT 63
Query: 77  SSYVYPFSTSFIFAM-APYKGVLAGHGLVFLFVPFHGIKGATEAQHLGLFNRTNDGNSSN 135
           +  V  F T F F++  PY   L   GLVF   P    K A    +LG+FN +   NS  
Sbjct: 64  TGTVASFETRFSFSIEQPYTRPLPADGLVFFMGPTKS-KPAQGYGYLGIFNNSKQDNSY- 121
Query: 136 HVFGVEFDVFKNQEFNDIDENHVGIDVNSLTSVSAHAAGYWPDNQXXXXXXXXXXXXXXX 195
              GVEFD F NQ ++     H+GIDVNS+ S+                           
Sbjct: 122 QTLGVEFDTFSNQ-WDPPQVPHIGIDVNSIRSIKT------------------------- 155
Query: 196 EKSFKELKLNNGKNYQVWIDYADSFINITMVEAGMKRPKRP---LLSVPLNLSGVLEDEM 252
               +  +L+NG+   V I Y  S     ++ A +  P       ++  +++  VL + +
Sbjct: 156 ----QPFQLDNGQVANVVIKYDAS---SKLLHAVLVYPSSGAIYTIAEIVDVKQVLPEWV 208
Query: 253 YVGFTAATG---QLVESHKILAWSF 274
            VG + ATG      E+H + +WSF
Sbjct: 209 DVGLSGATGAQRDAAETHDVYSWSF 233

>pdb|2LAL|A Chain A, Crystal Structure Determination And Refinement At 2.3 Angstroms Resolution Of The Lentil Lectin Length = 181

Iteration: 1
 Score = 66.6 bits (161), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 45/140 (32%), Positives = 66/140 (47%), Gaps = 3/140 (2%)
Query: 34  NSSNLSLYGTATVESRILTLTNSTTFTIGRALYPSKIPTKRPNSSYVYPFSTSFIFAMAP 93
           +  NL   G        LTLT +   T+GRALY + I     ++  V  F TSF F +  
Sbjct: 14  DQQNLIFQGDGYTTKGKLTLTKAVKSTVGRALYSTPIHIWDRDTGNVANFVTSFTFVIDA 73
Query: 94  YKGVLAGHGLVFLFVPFHGIKGATEAQHLGLFNRTNDGNSSNHVFGVEFDVFKNQEFNDI 153
                   G  F   P    K  T   +LG+FN + + + ++    VEFD F N  ++  
Sbjct: 74  PSSYNVADGFTFFIAPVD-TKPQTGGGYLGVFN-SKEYDKTSQTVAVEFDTFYNAAWDPS 131
Query: 154 D-ENHVGIDVNSLTSVSAHA 172
           + E H+GIDVNS+ SV+  +
Sbjct: 132 NKERHIGIDVNSIKSVNTKS 151

>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains Trapped In Trans-Phosphorylation Reaction Length = 334

Iteration: 1
 Score = 66.6 bits (161), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 74/283 (26%), Positives = 130/283 (45%), Gaps = 35/283 (12%)
Query: 392 IAVKRISHENDGGTRAFLAEISSLGRL-----KHKSLVGLRGWCKREKGSLMLVYDYMEN 446
           +AVK +    D  T   L+++ S   +     KHK+++ L G C ++ G L ++ +Y   
Sbjct: 70  VAVKMLK---DDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD-GPLYVIVEYASK 125
Query: 447 GSLDKWIFQCDGSMMLSCEERIRV------LKDVAAGVLYLHEGWE----KKVLHRDIKS 496
           G+L +++       M    +  RV       KD+ +    L  G E    +K +HRD+ +
Sbjct: 126 GNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAA 185
Query: 497 SNVLLDKEMNGRLGDFGLAR-MHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGF 555
            NVL+ +    ++ DFGLAR ++       TT     V ++APE       + Q+DV+ F
Sbjct: 186 RNVLVTENNVMKIADFGLARDINNIDXXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSF 245
Query: 556 GILILEVLS-GRRPIEEGKPNLVEMVWELMVQGKXXXXXXXXXXXKGGFDEDEVERVLHL 614
           G+L+ E+ + G  P   G P  VE +++L+ +G            K     +E+  ++  
Sbjct: 246 GVLMWEIFTLGGSPY-PGIP--VEELFKLLKEGH--------RMDKPANCTNELYMMMR- 293
Query: 615 GLLCAYPDPRARPTMRQVVKVLEGKIEAGIENETEDMDAYLLQ 657
              C +  P  RPT +Q+V+ L+  +      E  D+   L Q
Sbjct: 294 --DCWHAVPSQRPTFKQLVEDLDRILTLTTNEEYLDLSQPLEQ 334

>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With Staurosporine At 2a Resolution Length = 345

Iteration: 1
 Score = 66.2 bits (160), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 40/136 (29%), Positives = 68/136 (50%), Gaps = 7/136 (5%)
Query: 434 KGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRD 493
           K +L  V +Y+  G L   I  C                ++  G+ +LH    K +++RD
Sbjct: 90  KENLFFVMEYLNGGDLMYHIQSCHK---FDLSRATFYAAEIILGLQFLHS---KGIVYRD 143
Query: 494 IKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVF 553
           +K  N+LLDK+ + ++ DFG+ + +  G  A T    GT  Y+APE+    + +   D +
Sbjct: 144 LKLDNILLDKDGHIKIADFGMCKENMLGD-AKTNXFCGTPDYIAPEILLGQKYNHSVDWW 202
Query: 554 GFGILILEVLSGRRPI 569
            FG+L+ E+L G+ P 
Sbjct: 203 SFGVLLYEMLIGQSPF 218

>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor Length = 398

Iteration: 1
 Score = 66.2 bits (160), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 64/214 (29%), Positives = 105/214 (49%), Gaps = 27/214 (12%)
Query: 389 GAEIAVKRISHENDGGTRA--FLAEISSLGRLKHKSLVGLRGWCKR-----EKGSLMLVY 441
           G ++A+K+I +  D  T A   L E+  L   KH +++ ++   +      E  S+ +V 
Sbjct: 79  GQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKSVYVVL 138
Query: 442 DYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLL 501
           D ME+  L + I     S  L+ E     L  +  G+ Y+H     +V+HRD+K SN+L+
Sbjct: 139 DLMES-DLHQIIH---SSQPLTLEHVRYFLYQLLRGLKYMHSA---QVIHRDLKPSNLLV 191
Query: 502 DKEMNGRLGDFGLARMHGHGQVAST-------TRVVGTVGYLAPEVFSSGRASTQT-DVF 553
           ++    ++GDFG+AR    G   S        T  V T  Y APE+  S    TQ  D++
Sbjct: 192 NENCELKIGDFGMAR----GLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLW 247
Query: 554 GFGILILEVLSGRRPIEEGKPNLVEMVWELMVQG 587
             G +  E+L+ RR +  GK  + ++   +MV G
Sbjct: 248 SVGCIFGEMLA-RRQLFPGKNYVHQLQLIMMVLG 280

>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium Complex Lambda-Fl172 Length = 297

Iteration: 1
 Score = 66.2 bits (160), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 49/184 (26%), Positives = 94/184 (51%), Gaps = 17/184 (9%)
Query: 389 GAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVG-LRGWCKREKGSLMLVYDYMENG 447
           G E+A+++++ +        + EI  +   K+ ++V  L  +   ++  L +V +Y+  G
Sbjct: 45  GQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDE--LWVVMEYLAGG 102
Query: 448 SLDKWIFQ-C--DGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKE 504
           SL   + + C  +G +   C E ++ L+       +LH     +V+HRDIKS N+LL  +
Sbjct: 103 SLTDVVTETCMDEGQIAAVCRECLQALE-------FLHSN---QVIHRDIKSDNILLGMD 152
Query: 505 MNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLS 564
            + +L DFG        Q +  + +VGT  ++APEV +      + D++  GI+ +E++ 
Sbjct: 153 GSVKLTDFGFCAQITPEQ-SKRSXMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIE 211
Query: 565 GRRP 568
           G  P
Sbjct: 212 GEPP 215

>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2- Yl]amino}phenyl)acetic Acid Length = 303

Iteration: 1
 Score = 66.2 bits (160), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 63/260 (24%), Positives = 120/260 (46%), Gaps = 30/260 (11%)
Query: 392 IAVKRISHENDGGTR-AFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLD 450
           +AVK ++       R  FL E S +       +V L G   + + +L +V + M +G L 
Sbjct: 47  VAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTL-VVMELMAHGDLK 105
Query: 451 KWIFQC-------DGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDK 503
            ++           G    + +E I++  ++A G+ YL+    KK +HRD+ + N ++  
Sbjct: 106 SYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNA---KKFVHRDLAARNCMVAH 162
Query: 504 EMNGRLGDFGLAR-MHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEV 562
           +   ++GDFG+ R +          + +  V ++APE    G  +T +D++ FG+++ E+
Sbjct: 163 DFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEI 222
Query: 563 LSGRRPIEEGKPNLVEMVWELMVQGKXXXXXXXXXXXKGGFDEDE--VERVLHLGLLCAY 620
            S      +G  N  E V + ++ G             G  D+ +   ERV  L  +C  
Sbjct: 223 TSLAEQPYQGLSN--EQVLKFVMDG-------------GYLDQPDNCPERVTDLMRMCWQ 267
Query: 621 PDPRARPTMRQVVKVLEGKI 640
            +P+ RPT  ++V +L+  +
Sbjct: 268 FNPKMRPTFLEIVNLLKDDL 287

>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy) Ethylamino)ethyl) Amide Length = 342

Iteration: 1
 Score = 66.2 bits (160), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 48/162 (29%), Positives = 77/162 (47%), Gaps = 10/162 (6%)
Query: 409 LAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERI 468
           + E   L   +H  L  L+ +  +    L  V +Y   G L    F      + + EER 
Sbjct: 58  VTESRVLQNTRHPFLTALK-YAFQTHDRLCFVMEYANGGEL---FFHLSRERVFT-EERA 112
Query: 469 RVL-KDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTT 527
           R    ++ + + YLH    + V++RDIK  N++LDK+ + ++ DFGL +  G    A+  
Sbjct: 113 RFYGAEIVSALEYLHS---RDVVYRDIKLENLMLDKDGHIKITDFGLCK-EGISDGATMK 168
Query: 528 RVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPI 569
              GT  YLAPEV          D +G G+++ E++ GR P 
Sbjct: 169 XFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 210

>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain Length = 306

Iteration: 1
 Score = 66.2 bits (160), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 49/184 (26%), Positives = 94/184 (51%), Gaps = 17/184 (9%)
Query: 389 GAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVG-LRGWCKREKGSLMLVYDYMENG 447
           G E+A+++++ +        + EI  +   K+ ++V  L  +   ++  L +V +Y+  G
Sbjct: 46  GQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDE--LWVVMEYLAGG 103
Query: 448 SLDKWIFQ-C--DGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKE 504
           SL   + + C  +G +   C E ++ L+       +LH     +V+HRDIKS N+LL  +
Sbjct: 104 SLTDVVTETCMDEGQIAAVCRECLQALE-------FLHSN---QVIHRDIKSDNILLGMD 153
Query: 505 MNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLS 564
            + +L DFG        Q +  + +VGT  ++APEV +      + D++  GI+ +E++ 
Sbjct: 154 GSVKLTDFGFCAQITPEQ-SKRSXMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIE 212
Query: 565 GRRP 568
           G  P
Sbjct: 213 GEPP 216

>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B (pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3 Peptide Length = 337

Iteration: 1
 Score = 66.2 bits (160), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 48/162 (29%), Positives = 77/162 (47%), Gaps = 10/162 (6%)
Query: 409 LAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERI 468
           + E   L   +H  L  L+ +  +    L  V +Y   G L    F      + + EER 
Sbjct: 53  VTESRVLQNTRHPFLTALK-YAFQTHDRLCFVMEYANGGEL---FFHLSRERVFT-EERA 107
Query: 469 RVL-KDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTT 527
           R    ++ + + YLH    + V++RDIK  N++LDK+ + ++ DFGL +  G    A+  
Sbjct: 108 RFYGAEIVSALEYLHS---RDVVYRDIKLENLMLDKDGHIKITDFGLCK-EGISDGATMK 163
Query: 528 RVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPI 569
              GT  YLAPEV          D +G G+++ E++ GR P 
Sbjct: 164 XFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 205

>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1) Catalytic Domain Length = 317

Iteration: 1
 Score = 66.2 bits (160), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 35/101 (34%), Positives = 58/101 (57%), Gaps = 6/101 (5%)
Query: 471 LKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLA-RMHGHGQVASTTRV 529
           ++    GV YLH     +V+HRD+K  N+ L+ +M+ ++GDFGLA ++   G+   T  +
Sbjct: 148 MRQTIQGVQYLHNN---RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKT--L 202
Query: 530 VGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIE 570
            GT  Y+APEV      S + D++  G ++  +L G+ P E
Sbjct: 203 CGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFE 243

>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex With Atp- Competitive Inhibitors Length = 335

Iteration: 1
 Score = 66.2 bits (160), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 48/162 (29%), Positives = 77/162 (47%), Gaps = 10/162 (6%)
Query: 409 LAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERI 468
           + E   L   +H  L  L+ +  +    L  V +Y   G L    F      + + EER 
Sbjct: 53  VTESRVLQNTRHPFLTALK-YAFQTHDRLCFVMEYANGGEL---FFHLSRERVFT-EERA 107
Query: 469 RVL-KDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTT 527
           R    ++ + + YLH    + V++RDIK  N++LDK+ + ++ DFGL +  G    A+  
Sbjct: 108 RFYGAEIVSALEYLHS---RDVVYRDIKLENLMLDKDGHIKITDFGLCK-EGISDGATMK 163
Query: 528 RVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPI 569
              GT  YLAPEV          D +G G+++ E++ GR P 
Sbjct: 164 XFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 205

>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein Kinase I G Length = 304

Iteration: 1
 Score = 66.2 bits (160), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 53/176 (30%), Positives = 88/176 (50%), Gaps = 14/176 (7%)
Query: 411 EISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRV 470
           EI+ L ++KH+++V L            LV   +  G L   I +     + + ++   V
Sbjct: 56  EIAVLKKIKHENIVTLED-IYESTTHYYLVMQLVSGGELFDRILE---RGVYTEKDASLV 111
Query: 471 LKDVAAGVLYLHEGWEKKVLHRDIKSSNVL-LDKEMNGRL--GDFGLARMHGHGQVASTT 527
           ++ V + V YLHE     ++HRD+K  N+L L  E N ++   DFGL++M  +G +++  
Sbjct: 112 IQQVLSAVKYLHEN---GIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNGIMSTA- 167
Query: 528 RVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPI-EEGKPNLVEMVWE 582
              GT GY+APEV +    S   D +  G++   +L G  P  EE +  L E + E
Sbjct: 168 --CGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETESKLFEKIKE 221

>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1 Bound To Atp And Magnesium Chloride At 2.9a Length = 543

Iteration: 1
 Score = 66.2 bits (160), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 48/167 (28%), Positives = 77/167 (46%), Gaps = 6/167 (3%)
Query: 404 GTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLS 463
           G +  + E   L ++  + +V L  +    K  L LV   M  G +   I+  D      
Sbjct: 228 GYQGAMVEKKILAKVHSRFIVSL-AYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGF 286
Query: 464 CEER-IRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQ 522
            E R I     + +G+ +LH+   + +++RD+K  NVLLD + N R+ D GLA     GQ
Sbjct: 287 QEPRAIFYTAQIVSGLEHLHQ---RNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQ 343
Query: 523 VASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPI 569
              T    GT G++APE+          D F  G+ + E+++ R P 
Sbjct: 344 T-KTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPF 389

>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1 Bound To Atp And Magnesium Chloride At 2.7a Length = 543

Iteration: 1
 Score = 66.2 bits (160), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 48/167 (28%), Positives = 77/167 (46%), Gaps = 6/167 (3%)
Query: 404 GTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLS 463
           G +  + E   L ++  + +V L  +    K  L LV   M  G +   I+  D      
Sbjct: 228 GYQGAMVEKKILAKVHSRFIVSL-AYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGF 286
Query: 464 CEER-IRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQ 522
            E R I     + +G+ +LH+   + +++RD+K  NVLLD + N R+ D GLA     GQ
Sbjct: 287 QEPRAIFYTAQIVSGLEHLHQ---RNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQ 343
Query: 523 VASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPI 569
              T    GT G++APE+          D F  G+ + E+++ R P 
Sbjct: 344 T-KTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPF 389

>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic K659n Mutation Responsible For An Unclassified Craniosynostosis Syndrome. Length = 324

Iteration: 1
 Score = 66.2 bits (160), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 70/263 (26%), Positives = 125/263 (47%), Gaps = 35/263 (13%)
Query: 392 IAVKRISHENDGGTRAFLAEISSLGRL-----KHKSLVGLRGWCKREKGSLMLVYDYMEN 446
           +AVK +    D  T   L+++ S   +     KHK+++ L G C ++ G L ++ +Y   
Sbjct: 70  VAVKMLK---DDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD-GPLYVIVEYASK 125
Query: 447 GSLDKWIFQCDGSMMLSCEERIRV------LKDVAAGVLYLHEGWE----KKVLHRDIKS 496
           G+L +++       M    +  RV       KD+ +    L  G E    +K +HRD+ +
Sbjct: 126 GNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAA 185
Query: 497 SNVLLDKEMNGRLGDFGLAR-MHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGF 555
            NVL+ +    ++ DFGLAR ++      +TT     V ++APE       + Q+DV+ F
Sbjct: 186 RNVLVTENNVMKIADFGLARDINNIDYYKNTTNGRLPVKWMAPEALFDRVYTHQSDVWSF 245
Query: 556 GILILEVLS-GRRPIEEGKPNLVEMVWELMVQGKXXXXXXXXXXXKGGFDEDEVERVLHL 614
           G+L+ E+ + G  P   G P  VE +++L+ +G            K     +E+  ++  
Sbjct: 246 GVLMWEIFTLGGSPY-PGIP--VEELFKLLKEGH--------RMDKPANCTNELYMMMR- 293
Query: 615 GLLCAYPDPRARPTMRQVVKVLE 637
              C +  P  RPT +Q+V+ L+
Sbjct: 294 --DCWHAVPSQRPTFKQLVEDLD 314

>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin Length = 305

Iteration: 1
 Score = 66.2 bits (160), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 47/157 (29%), Positives = 84/157 (53%), Gaps = 10/157 (6%)
Query: 415 LGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDV 474
           L  + H  +V L  +  + +G L L+ D++  G L     +    +M + E+    L ++
Sbjct: 81  LVEVNHPFIVKLH-YAFQTEGKLYLILDFLRGGDL---FTRLSKEVMFTEEDVKFYLAEL 136
Query: 475 AAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMH-GHGQVASTTRVVGTV 533
           A  + +LH      +++RD+K  N+LLD+E + +L DFGL++    H + A +    GTV
Sbjct: 137 ALALDHLHS---LGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYS--FCGTV 191
Query: 534 GYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIE 570
            Y+APEV +    +   D + FG+L+ E+L+G  P +
Sbjct: 192 EYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQ 228

>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex With Flavonoid Glycoside Sl0101 Length = 304

Iteration: 1
 Score = 66.2 bits (160), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 47/157 (29%), Positives = 84/157 (53%), Gaps = 10/157 (6%)
Query: 415 LGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDV 474
           L  + H  +V L  +  + +G L L+ D++  G L     +    +M + E+    L ++
Sbjct: 80  LVEVNHPFIVKLH-YAFQTEGKLYLILDFLRGGDL---FTRLSKEVMFTEEDVKFYLAEL 135
Query: 475 AAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMH-GHGQVASTTRVVGTV 533
           A  + +LH      +++RD+K  N+LLD+E + +L DFGL++    H + A +    GTV
Sbjct: 136 ALALDHLHS---LGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYS--FCGTV 190
Query: 534 GYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIE 570
            Y+APEV +    +   D + FG+L+ E+L+G  P +
Sbjct: 191 EYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQ 227

>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d With Gsk3 Peptide And Amp-Pnp Length = 336

Iteration: 1
 Score = 66.2 bits (160), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 48/162 (29%), Positives = 77/162 (47%), Gaps = 10/162 (6%)
Query: 409 LAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERI 468
           + E   L   +H  L  L+ +  +    L  V +Y   G L    F      + + EER 
Sbjct: 53  VTESRVLQNTRHPFLTALK-YAFQTHDRLCFVMEYANGGEL---FFHLSRERVFT-EERA 107
Query: 469 RVL-KDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTT 527
           R    ++ + + YLH    + V++RDIK  N++LDK+ + ++ DFGL +  G    A+  
Sbjct: 108 RFYGAEIVSALEYLHS---RDVVYRDIKLENLMLDKDGHIKITDFGLCK-EGISDGATMK 163
Query: 528 RVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPI 569
              GT  YLAPEV          D +G G+++ E++ GR P 
Sbjct: 164 XFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 205

>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution Length = 543

Iteration: 1
 Score = 66.2 bits (160), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 48/167 (28%), Positives = 77/167 (46%), Gaps = 6/167 (3%)
Query: 404 GTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLS 463
           G +  + E   L ++  + +V L  +    K  L LV   M  G +   I+  D      
Sbjct: 228 GYQGAMVEKKILAKVHSRFIVSL-AYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGF 286
Query: 464 CEER-IRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQ 522
            E R I     + +G+ +LH+   + +++RD+K  NVLLD + N R+ D GLA     GQ
Sbjct: 287 QEPRAIFYTAQIVSGLEHLHQ---RNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQ 343
Query: 523 VASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPI 569
              T    GT G++APE+          D F  G+ + E+++ R P 
Sbjct: 344 T-KTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPF 389

>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii (Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2 Length = 484

Iteration: 1
 Score = 65.9 bits (159), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 57/187 (30%), Positives = 93/187 (49%), Gaps = 18/187 (9%)
Query: 389 GAEIAVKRISH---ENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYME 445
           G E AVK IS    +      + L E+  L +L H ++  L  + + +KG   LV +   
Sbjct: 51  GQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIXKLYEFFE-DKGYFYLVGEVYT 109
Query: 446 NGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLD--- 502
            G L   I         S  +  R+++ V +G+ Y H+    K++HRD+K  N+LL+   
Sbjct: 110 GGELFDEII---SRKRFSEVDAARIIRQVLSGITYXHKN---KIVHRDLKPENLLLESKS 163
Query: 503 KEMNGRLGDFGLARMHGHGQVASTTR-VVGTVGYLAPEVFSSGRASTQTDVFGFGILILE 561
           K+ N R+ DFGL+    H + +   +  +GT  Y+APEV   G    + DV+  G+++  
Sbjct: 164 KDANIRIIDFGLS---THFEASKKXKDKIGTAYYIAPEVL-HGTYDEKCDVWSTGVILYI 219
Query: 562 VLSGRRP 568
           +LSG  P
Sbjct: 220 LLSGCPP 226

>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain Length = 335

Iteration: 1
 Score = 65.9 bits (159), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 48/162 (29%), Positives = 77/162 (47%), Gaps = 10/162 (6%)
Query: 409 LAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERI 468
           + E   L   +H  L  L+ +  +    L  V +Y   G L    F      + + EER 
Sbjct: 53  VTESRVLQNTRHPFLTALK-YAFQTHDRLCFVMEYANGGEL---FFHLSRERVFT-EERA 107
Query: 469 RVL-KDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTT 527
           R    ++ + + YLH    + V++RDIK  N++LDK+ + ++ DFGL +  G    A+  
Sbjct: 108 RFYGAEIVSALEYLHS---RDVVYRDIKLENLMLDKDGHIKITDFGLCK-EGISDGATMK 163
Query: 528 RVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPI 569
              GT  YLAPEV          D +G G+++ E++ GR P 
Sbjct: 164 TFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 205

>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70 Length = 613

Iteration: 1
 Score = 65.9 bits (159), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 52/187 (27%), Positives = 95/187 (50%), Gaps = 11/187 (5%)
Query: 391 EIAVKRISHEND-GGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSL 449
           ++A+K +    +   T   + E   + +L +  +V L G C+ E  +LMLV +    G L
Sbjct: 365 DVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQAE--ALMLVMEMAGGGPL 422
Query: 450 DKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRL 509
            K++      + +S      +L  V+ G+ YL E   K  +HR++ + NVLL      ++
Sbjct: 423 HKFLVGKREEIPVS--NVAELLHQVSMGMKYLEE---KNFVHRNLAARNVLLVNRHYAKI 477
Query: 510 GDFGLARMHGHGQVASTTRVVG--TVGYLAPEVFSSGRASTQTDVFGFGILILEVLS-GR 566
            DFGL++  G      T R  G   + + APE  +  + S+++DV+ +G+ + E LS G+
Sbjct: 478 SDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQ 537
Query: 567 RPIEEGK 573
           +P ++ K
Sbjct: 538 KPYKKMK 544

>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild- Type In Apo Form. Length = 303

Iteration: 1
 Score = 65.9 bits (159), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 50/197 (25%), Positives = 94/197 (47%), Gaps = 32/197 (16%)
Query: 393 AVKRISHENDGGTRAFLAEISSLGRLKHKSLVGL-RGWCKR-----------EKGSLMLV 440
           A+K+I H  +  +   L+E+  L  L H+ +V     W +R           +K +L + 
Sbjct: 35  AIKKIRHTEEKLS-TILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQ 93
Query: 441 YDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVL 500
            +Y EN +L   I     ++    +E  R+ + +   + Y+H    + ++HRD+K  N+ 
Sbjct: 94  MEYCENRTLYDLIHS--ENLNQQRDEYWRLFRQILEALSYIHS---QGIIHRDLKPMNIF 148
Query: 501 LDKEMNGRLGDFGLAR-MHGH------------GQVASTTRVVGTVGYLAPEVFS-SGRA 546
           +D+  N ++GDFGLA+ +H              G   + T  +GT  Y+A EV   +G  
Sbjct: 149 IDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHY 208
Query: 547 STQTDVFGFGILILEVL 563
           + + D++  GI+  E++
Sbjct: 209 NEKIDMYSLGIIFFEMI 225

>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B Akt By Hydrophobic Motif Phosphorylation Length = 315

Iteration: 1
 Score = 65.9 bits (159), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 48/161 (29%), Positives = 77/161 (47%), Gaps = 10/161 (6%)
Query: 409 LAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERI 468
           + E   L   +H  L  L+ +  +    L  V +Y   G L    F      + + EER 
Sbjct: 53  VTESRVLQNTRHPFLTALK-YAFQTHDRLCFVMEYANGGEL---FFHLSRERVFT-EERA 107
Query: 469 RVL-KDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTT 527
           R    ++ + + YLH    + V++RDIK  N++LDK+ + ++ DFGL +  G    A+  
Sbjct: 108 RFYGAEIVSALEYLHS---RDVVYRDIKLENLMLDKDGHIKITDFGLCK-EGISDGATMK 163
Query: 528 RVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRP 568
              GT  YLAPEV          D +G G+++ E++ GR P
Sbjct: 164 TFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 204

>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain Length = 339

Iteration: 1
 Score = 65.9 bits (159), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 48/162 (29%), Positives = 77/162 (47%), Gaps = 10/162 (6%)
Query: 409 LAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERI 468
           + E   L   +H  L  L+ +  +    L  V +Y   G L    F      + + EER 
Sbjct: 56  VTESRVLQNTRHPFLTALK-YAFQTHDRLCFVMEYANGGEL---FFHLSRERVFT-EERA 110
Query: 469 RVL-KDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTT 527
           R    ++ + + YLH    + V++RDIK  N++LDK+ + ++ DFGL +  G    A+  
Sbjct: 111 RFYGAEIVSALEYLHS---RDVVYRDIKLENLMLDKDGHIKITDFGLCK-EGISDGATMK 166
Query: 528 RVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPI 569
              GT  YLAPEV          D +G G+++ E++ GR P 
Sbjct: 167 TFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 208

>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex With An Mkk5 Binding Fragment Length = 442

Iteration: 1
 Score = 65.9 bits (159), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 64/214 (29%), Positives = 105/214 (49%), Gaps = 27/214 (12%)
Query: 389 GAEIAVKRISHENDGGTRA--FLAEISSLGRLKHKSLVGLRGWCKR-----EKGSLMLVY 441
           G ++A+K+I +  D  T A   L E+  L   KH +++ ++   +      E  S+ +V 
Sbjct: 80  GQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKSVYVVL 139
Query: 442 DYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLL 501
           D ME+  L + I     S  L+ E     L  +  G+ Y+H     +V+HRD+K SN+L+
Sbjct: 140 DLMES-DLHQIIH---SSQPLTLEHVRYFLYQLLRGLKYMHSA---QVIHRDLKPSNLLV 192
Query: 502 DKEMNGRLGDFGLARMHGHGQVAST-------TRVVGTVGYLAPEVFSSGRASTQT-DVF 553
           ++    ++GDFG+AR    G   S        T  V T  Y APE+  S    TQ  D++
Sbjct: 193 NENCELKIGDFGMAR----GLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLW 248
Query: 554 GFGILILEVLSGRRPIEEGKPNLVEMVWELMVQG 587
             G +  E+L+ RR +  GK  + ++   +MV G
Sbjct: 249 SVGCIFGEMLA-RRQLFPGKNYVHQLQLIMMVLG 281

>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C DOUBLE MUTANT Complexed With Adp And Mg Length = 543

Iteration: 1
 Score = 65.9 bits (159), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 48/167 (28%), Positives = 77/167 (46%), Gaps = 6/167 (3%)
Query: 404 GTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLS 463
           G +  + E   L ++  + +V L  +    K  L LV   M  G +   I+  D      
Sbjct: 228 GYQGAMVEKKILAKVHSRFIVSL-AYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGF 286
Query: 464 CEER-IRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQ 522
            E R I     + +G+ +LH+   + +++RD+K  NVLLD + N R+ D GLA     GQ
Sbjct: 287 QEPRAIFYTAQIVSGLEHLHQ---RNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQ 343
Query: 523 VASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPI 569
              T    GT G++APE+          D F  G+ + E+++ R P 
Sbjct: 344 T-KTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPF 389

>pdb|3B2T|A Chain A, Structure Of Phosphotransferase Length = 311

Iteration: 1
 Score = 65.9 bits (159), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 70/263 (26%), Positives = 124/263 (47%), Gaps = 35/263 (13%)
Query: 392 IAVKRISHENDGGTRAFLAEISSLGRL-----KHKSLVGLRGWCKREKGSLMLVYDYMEN 446
           +AVK +    D  T   L+++ S   +     KHK+++ L G C ++ G L ++ +Y   
Sbjct: 57  VAVKMLK---DDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD-GPLYVIVEYASK 112
Query: 447 GSLDKWIFQCDGSMMLSCEERIRV------LKDVAAGVLYLHEGWE----KKVLHRDIKS 496
           G+L +++       M    +  RV       KD+ +    L  G E    +K +HRD+ +
Sbjct: 113 GNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLTA 172
Query: 497 SNVLLDKEMNGRLGDFGLAR-MHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGF 555
            NVL+ +    ++ DFGLAR ++       TT     V ++APE       + Q+DV+ F
Sbjct: 173 RNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSF 232
Query: 556 GILILEVLS-GRRPIEEGKPNLVEMVWELMVQGKXXXXXXXXXXXKGGFDEDEVERVLHL 614
           G+L+ E+ + G  P   G P  VE +++L+ +G            K     +E+  ++  
Sbjct: 233 GVLMWEIFTLGGSPY-PGIP--VEELFKLLKEGH--------RMDKPANCTNELYMMMR- 280
Query: 615 GLLCAYPDPRARPTMRQVVKVLE 637
              C +  P  RPT +Q+V+ L+
Sbjct: 281 --DCWHAVPSQRPTFKQLVEDLD 301

>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2 Complexed With A Nucleoside Inhibitor Length = 298

Iteration: 1
 Score = 65.9 bits (159), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 56/183 (30%), Positives = 90/183 (49%), Gaps = 14/183 (7%)
Query: 389 GAEIAVK--RISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMEN 446
           G  +A+K  R+  E +G     + EIS L  L H ++V L      E   L LV++++  
Sbjct: 27  GEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTE-NKLYLVFEFLHQ 85
Query: 447 GSLDKWIFQCDGSMMLSCEERI--RVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKE 504
             L K++   D S +      +    L  +  G+ + H     +VLHRD+K  N+L++ E
Sbjct: 86  -DLKKFM---DASALTGIPLPLIKSYLFQLLQGLAFCHS---HRVLHRDLKPQNLLINTE 138
Query: 505 MNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGR-ASTQTDVFGFGILILEVL 563
              +L DFGLAR  G   V + T  V T+ Y APE+    +  ST  D++  G +  E++
Sbjct: 139 GAIKLADFGLARAFG-VPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV 197
Query: 564 SGR 566
           + R
Sbjct: 198 TRR 200

>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain From D. Discoideum Bound To Appcp Length = 287

Iteration: 1
 Score = 65.9 bits (159), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 54/241 (22%), Positives = 107/241 (44%), Gaps = 34/241 (14%)
Query: 406 RAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCE 465
           + F  E+  +  L H ++V L G          +V +++  G L   +   D +  +   
Sbjct: 68  QEFQREVFIMSNLNHPNIVKLYGLMHNPP---RMVMEFVPCGDLYHRLL--DKAHPIKWS 122
Query: 466 ERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLL-----DKEMNGRLGDFGLARMHGH 520
            ++R++ D+A G+ Y+ +     ++HRD++S N+ L     +  +  ++ DFG ++   H
Sbjct: 123 VKLRLMLDIALGIEYM-QNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQQSVH 181
Query: 521 GQVASTTRVVGTVGYLAPEVFSSGRAS--TQTDVFGFGILILEVLSGRRPIEE---GKPN 575
               S + ++G   ++APE   +   S   + D + F +++  +L+G  P +E   GK  
Sbjct: 182 ----SVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIK 237
Query: 576 LVEMVWELMVQGKXXXXXXXXXXXKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKV 635
            + M+ E                 +    ED   R+ ++  LC   DP+ RP    +VK 
Sbjct: 238 FINMIRE--------------EGLRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKE 283
Query: 636 L 636
           L
Sbjct: 284 L 284

>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase In Complex With Arq 069 Length = 313

Iteration: 1
 Score = 65.9 bits (159), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 70/263 (26%), Positives = 124/263 (47%), Gaps = 35/263 (13%)
Query: 392 IAVKRISHENDGGTRAFLAEISSLGRL-----KHKSLVGLRGWCKREKGSLMLVYDYMEN 446
           +AVK +    D  T   L+++ S   +     KHK+++ L G C ++ G L ++ +Y   
Sbjct: 59  VAVKMLK---DDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD-GPLYVIVEYASK 114
Query: 447 GSLDKWIFQCDGSMMLSCEERIRV------LKDVAAGVLYLHEGWE----KKVLHRDIKS 496
           G+L +++       M    +  RV       KD+ +    L  G E    +K +HRD+ +
Sbjct: 115 GNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAA 174
Query: 497 SNVLLDKEMNGRLGDFGLAR-MHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGF 555
            NVL+ +    ++ DFGLAR ++       TT     V ++APE       + Q+DV+ F
Sbjct: 175 RNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSF 234
Query: 556 GILILEVLS-GRRPIEEGKPNLVEMVWELMVQGKXXXXXXXXXXXKGGFDEDEVERVLHL 614
           G+L+ E+ + G  P   G P  VE +++L+ +G            K     +E+  ++  
Sbjct: 235 GVLMWEIFTLGGSPY-PGIP--VEELFKLLKEGH--------RMDKPANCTNELYMMMR- 282
Query: 615 GLLCAYPDPRARPTMRQVVKVLE 637
              C +  P  RPT +Q+V+ L+
Sbjct: 283 --DCWHAVPSQRPTFKQLVEDLD 303

>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In Complex With The Sh2 Domain Of Aps Length = 306

Iteration: 1
 Score = 65.9 bits (159), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 66/266 (24%), Positives = 122/266 (45%), Gaps = 32/266 (12%)
Query: 388 GGAE--IAVKRISHENDGGTR-AFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYM 444
           G AE  +AVK ++       R  FL E S +       +V L G   + + +L +V + M
Sbjct: 44  GEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTL-VVMELM 102
Query: 445 ENGSLDKWIFQC-------DGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSS 497
            +G L  ++           G    + +E I++  ++A G+ YL+    KK +HRD+ + 
Sbjct: 103 AHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNA---KKFVHRDLAAR 159
Query: 498 NVLLDKEMNGRLGDFGLAR-MHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFG 556
           N ++  +   ++GDFG+ R +          + +  V ++APE    G  +T +D++ FG
Sbjct: 160 NCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFG 219
Query: 557 ILILEVLSGRRPIEEGKPNLVEMVWELMVQGKXXXXXXXXXXXKGGFDEDE--VERVLHL 614
           +++ E+ S      +G  N  E V + ++ G             G  D+ +   ERV  L
Sbjct: 220 VVLWEITSLAEQPYQGLSN--EQVLKFVMDG-------------GYLDQPDNCPERVTDL 264
Query: 615 GLLCAYPDPRARPTMRQVVKVLEGKI 640
             +C   +P  RPT  ++V +L+  +
Sbjct: 265 MRMCWQFNPNMRPTFLEIVNLLKDDL 290

>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of 8-Anilino-1-Naphthalene Sulfonate Length = 306

Iteration: 1
 Score = 65.9 bits (159), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 56/183 (30%), Positives = 90/183 (49%), Gaps = 14/183 (7%)
Query: 389 GAEIAVK--RISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMEN 446
           G  +A+K  R+  E +G     + EIS L  L H ++V L      E   L LV++++  
Sbjct: 35  GEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTE-NKLYLVFEFLHQ 93
Query: 447 GSLDKWIFQCDGSMMLSCEERI--RVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKE 504
             L K++   D S +      +    L  +  G+ + H     +VLHRD+K  N+L++ E
Sbjct: 94  -DLKKFM---DASALTGIPLPLIKSYLFQLLQGLAFCHS---HRVLHRDLKPQNLLINTE 146
Query: 505 MNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGR-ASTQTDVFGFGILILEVL 563
              +L DFGLAR  G   V + T  V T+ Y APE+    +  ST  D++  G +  E++
Sbjct: 147 GAIKLADFGLARAFG-VPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV 205
Query: 564 SGR 566
           + R
Sbjct: 206 TRR 208

>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A Benzolactam-Derived Inhibitor Length = 333

Iteration: 1
 Score = 65.5 bits (158), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 48/161 (29%), Positives = 82/161 (50%), Gaps = 10/161 (6%)
Query: 411 EISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRV 470
           EIS    L H+ +VG  G+ + +   + +V +     SL +   +      L+  E    
Sbjct: 89  EISIHRSLAHQHVVGFHGFFE-DNDFVFVVLELCRRRSLLELHKR---RKALTEPEARYY 144
Query: 471 LKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLA-RMHGHGQVASTTRV 529
           L+ +  G  YLH     +V+HRD+K  N+ L++++  ++GDFGLA ++   G+      +
Sbjct: 145 LRQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKV--L 199
Query: 530 VGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIE 570
            GT  Y+APEV S    S + DV+  G ++  +L G+ P E
Sbjct: 200 CGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFE 240

>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound To Appcp From D. Discoideum Length = 287

Iteration: 1
 Score = 65.5 bits (158), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 54/241 (22%), Positives = 107/241 (44%), Gaps = 34/241 (14%)
Query: 406 RAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCE 465
           + F  E+  +  L H ++V L G          +V +++  G L   +   D +  +   
Sbjct: 68  QEFQREVFIMSNLNHPNIVKLYGLMHNPP---RMVMEFVPCGDLYHRLL--DKAHPIKWS 122
Query: 466 ERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLL-----DKEMNGRLGDFGLARMHGH 520
            ++R++ D+A G+ Y+ +     ++HRD++S N+ L     +  +  ++ DF L++   H
Sbjct: 123 VKLRLMLDIALGIEYM-QNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQQSVH 181
Query: 521 GQVASTTRVVGTVGYLAPEVFSSGRAS--TQTDVFGFGILILEVLSGRRPIEE---GKPN 575
               S + ++G   ++APE   +   S   + D + F +++  +L+G  P +E   GK  
Sbjct: 182 ----SVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIK 237
Query: 576 LVEMVWELMVQGKXXXXXXXXXXXKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKV 635
            + M+ E                 +    ED   R+ ++  LC   DP+ RP    +VK 
Sbjct: 238 FINMIRE--------------EGLRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKE 283
Query: 636 L 636
           L
Sbjct: 284 L 284

>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071 Length = 360

Iteration: 1
 Score = 65.5 bits (158), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 43/183 (23%), Positives = 84/183 (45%), Gaps = 8/183 (4%)
Query: 401 NDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSM 460
            D      + E   L  L     +     C +    L  V +Y+  G L   ++      
Sbjct: 59  QDDDVECTMVEKRVLALLDKPPFLTQLHSCFQTVDRLYFVMEYVNGGDL---MYHIQQVG 115
Query: 461 MLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGH 520
                + +    +++ G+ +LH+   + +++RD+K  NV+LD E + ++ DFG+ + H  
Sbjct: 116 KFKEPQAVFYAAEISIGLFFLHK---RGIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMM 172
Query: 521 GQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIE-EGKPNLVEM 579
             V +T    GT  Y+APE+ +        D + +G+L+ E+L+G+ P + E +  L + 
Sbjct: 173 DGV-TTREFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDELFQS 231
Query: 580 VWE 582
           + E
Sbjct: 232 IME 234

>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide, Compound (S)-8b Length = 299

Iteration: 1
 Score = 65.5 bits (158), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 56/183 (30%), Positives = 90/183 (49%), Gaps = 14/183 (7%)
Query: 389 GAEIAVK--RISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMEN 446
           G  +A+K  R+  E +G     + EIS L  L H ++V L      E   L LV++++  
Sbjct: 28  GEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTE-NKLYLVFEFLHQ 86
Query: 447 GSLDKWIFQCDGSMMLSCEERI--RVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKE 504
             L K++   D S +      +    L  +  G+ + H     +VLHRD+K  N+L++ E
Sbjct: 87  -DLKKFM---DASALTGIPLPLIKSYLFQLLQGLAFCHS---HRVLHRDLKPQNLLINTE 139
Query: 505 MNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGR-ASTQTDVFGFGILILEVL 563
              +L DFGLAR  G   V + T  V T+ Y APE+    +  ST  D++  G +  E++
Sbjct: 140 GAIKLADFGLARAFG-VPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV 198
Query: 564 SGR 566
           + R
Sbjct: 199 TRR 201

>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine Length = 306

Iteration: 1
 Score = 65.5 bits (158), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 56/183 (30%), Positives = 90/183 (49%), Gaps = 14/183 (7%)
Query: 389 GAEIAVK--RISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMEN 446
           G  +A+K  R+  E +G     + EIS L  L H ++V L      E   L LV++++  
Sbjct: 35  GEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTE-NKLYLVFEFLHQ 93
Query: 447 GSLDKWIFQCDGSMMLSCEERI--RVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKE 504
             L K++   D S +      +    L  +  G+ + H     +VLHRD+K  N+L++ E
Sbjct: 94  -DLKKFM---DASALTGIPLPLIKSYLFQLLQGLAFCHS---HRVLHRDLKPQNLLINTE 146
Query: 505 MNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGR-ASTQTDVFGFGILILEVL 563
              +L DFGLAR  G   V + T  V T+ Y APE+    +  ST  D++  G +  E++
Sbjct: 147 GAIKLADFGLARAFG-VPVRTYTHEVVTLWYRAPEILLGXKYYSTAVDIWSLGCIFAEMV 205
Query: 564 SGR 566
           + R
Sbjct: 206 TRR 208

>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like Kinase 1 Length = 335

Iteration: 1
 Score = 65.5 bits (158), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 48/161 (29%), Positives = 82/161 (50%), Gaps = 10/161 (6%)
Query: 411 EISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRV 470
           EIS    L H+ +VG  G+ + +   + +V +     SL +   +      L+  E    
Sbjct: 91  EISIHRSLAHQHVVGFHGFFE-DNDFVFVVLELCRRRSLLELHKR---RKALTEPEARYY 146
Query: 471 LKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLA-RMHGHGQVASTTRV 529
           L+ +  G  YLH     +V+HRD+K  N+ L++++  ++GDFGLA ++   G+      +
Sbjct: 147 LRQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKV--L 201
Query: 530 VGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIE 570
            GT  Y+APEV S    S + DV+  G ++  +L G+ P E
Sbjct: 202 CGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFE 242

>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex Length = 298

Iteration: 1
 Score = 65.5 bits (158), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 56/183 (30%), Positives = 90/183 (49%), Gaps = 14/183 (7%)
Query: 389 GAEIAVK--RISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMEN 446
           G  +A+K  R+  E +G     + EIS L  L H ++V L      E   L LV++++  
Sbjct: 27  GEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTE-NKLYLVFEFLHQ 85
Query: 447 GSLDKWIFQCDGSMMLSCEERI--RVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKE 504
             L K++   D S +      +    L  +  G+ + H     +VLHRD+K  N+L++ E
Sbjct: 86  -DLKKFM---DASALTGIPLPLIKSYLFQLLQGLAFCHS---HRVLHRDLKPQNLLINTE 138
Query: 505 MNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGR-ASTQTDVFGFGILILEVL 563
              +L DFGLAR  G   V + T  V T+ Y APE+    +  ST  D++  G +  E++
Sbjct: 139 GAIKLADFGLARAFG-VPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV 197
Query: 564 SGR 566
           + R
Sbjct: 198 TRR 200

>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp Length = 354

Iteration: 1
 Score = 65.5 bits (158), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 48/176 (27%), Positives = 88/176 (50%), Gaps = 13/176 (7%)
Query: 408 FLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEER 467
            + E+  L       +VG  G    + G + +  ++M+ GSLD+ + +   +  +  E  
Sbjct: 61  IIRELQVLHECNSPYIVGFYGAFYSD-GEISICMEHMDGGSLDQVLKE---AKRIPEEIL 116
Query: 468 IRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVAST- 526
            +V   V  G+ YL E  + +++HRD+K SN+L++     +L DFG++     GQ+  + 
Sbjct: 117 GKVSIAVLRGLAYLRE--KHQIMHRDVKPSNILVNSRGEIKLCDFGVS-----GQLIDSM 169
Query: 527 -TRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVW 581
               VGT  Y+APE       S Q+D++  G+ ++E+  GR PI       +E ++
Sbjct: 170 ANSFVGTRSYMAPERLQGTHYSVQSDIWSMGLSLVELAVGRYPIPPPDAKELEAIF 225

>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild Type Fgf Receptor 2 (Fgfr2) Kinase Domain Length = 370

Iteration: 1
 Score = 65.5 bits (158), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 70/263 (26%), Positives = 124/263 (47%), Gaps = 35/263 (13%)
Query: 392 IAVKRISHENDGGTRAFLAEISSLGRL-----KHKSLVGLRGWCKREKGSLMLVYDYMEN 446
           +AVK +    D  T   L+++ S   +     KHK+++ L G C ++ G L ++ +Y   
Sbjct: 116 VAVKMLK---DDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD-GPLYVIVEYASK 171
Query: 447 GSLDKWIFQCDGSMMLSCEERIRV------LKDVAAGVLYLHEGWE----KKVLHRDIKS 496
           G+L +++       M    +  RV       KD+ +    L  G E    +K +HRD+ +
Sbjct: 172 GNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAA 231
Query: 497 SNVLLDKEMNGRLGDFGLAR-MHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGF 555
            NVL+ +    ++ DFGLAR ++       TT     V ++APE       + Q+DV+ F
Sbjct: 232 RNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSF 291
Query: 556 GILILEVLS-GRRPIEEGKPNLVEMVWELMVQGKXXXXXXXXXXXKGGFDEDEVERVLHL 614
           G+L+ E+ + G  P   G P  VE +++L+ +G            K     +E+  ++  
Sbjct: 292 GVLMWEIFTLGGSPY-PGIP--VEELFKLLKEGH--------RMDKPANCTNELYMMMR- 339
Query: 615 GLLCAYPDPRARPTMRQVVKVLE 637
              C +  P  RPT +Q+V+ L+
Sbjct: 340 --DCWHAVPSQRPTFKQLVEDLD 360

>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine Length = 299

Iteration: 1
 Score = 65.5 bits (158), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 56/183 (30%), Positives = 90/183 (49%), Gaps = 14/183 (7%)
Query: 389 GAEIAVK--RISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMEN 446
           G  +A+K  R+  E +G     + EIS L  L H ++V L      E   L LV++++  
Sbjct: 28  GEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTE-NKLYLVFEFLHQ 86
Query: 447 GSLDKWIFQCDGSMMLSCEERI--RVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKE 504
             L K++   D S +      +    L  +  G+ + H     +VLHRD+K  N+L++ E
Sbjct: 87  -DLKKFM---DASALTGIPLPLIKSYLFQLLQGLAFCHS---HRVLHRDLKPQNLLINTE 139
Query: 505 MNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGR-ASTQTDVFGFGILILEVL 563
              +L DFGLAR  G   V + T  V T+ Y APE+    +  ST  D++  G +  E++
Sbjct: 140 GAIKLADFGLARAFG-VPVRTYTHEVVTLWYRAPEILLGXKYYSTAVDIWSLGCIFAEMV 198
Query: 564 SGR 566
           + R
Sbjct: 199 TRR 201

>pdb|2LTN|A Chain A, Design, Expression, And Crystallization Of Recombinant Lectin From The Garden Pea (Pisum Sativum) Length = 181

Iteration: 1
 Score = 65.5 bits (158), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 45/140 (32%), Positives = 64/140 (45%), Gaps = 3/140 (2%)
Query: 34  NSSNLSLYGTATVESRILTLTNSTTFTIGRALYPSKIPTKRPNSSYVYPFSTSFIFAMAP 93
           +  NL   G        LTLT +   T+GRALY S I      +  V  F TSF F +  
Sbjct: 14  DQQNLIFQGDGYTTKEKLTLTKAVKNTVGRALYSSPIHIWDRETGNVANFVTSFTFVINA 73
Query: 94  YKGVLAGHGLVFLFVPFHGIKGATEAQHLGLFNRTNDGNSSNHVFGVEFDVFKNQEFNDI 153
                   G  F   P    K  T   +LG+FN + + + +     VEFD F N  ++  
Sbjct: 74  PNSYNVADGFTFFIAPVD-TKPQTGGGYLGVFN-SAEYDKTTQTVAVEFDTFYNAAWDPS 131
Query: 154 DEN-HVGIDVNSLTSVSAHA 172
           + + H+GIDVNS+ SV+  +
Sbjct: 132 NRDRHIGIDVNSIKSVNTKS 151

>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain Length = 306

Iteration: 1
 Score = 65.5 bits (158), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 49/184 (26%), Positives = 94/184 (51%), Gaps = 17/184 (9%)
Query: 389 GAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVG-LRGWCKREKGSLMLVYDYMENG 447
           G E+A+++++ +        + EI  +   K+ ++V  L  +   ++  L +V +Y+  G
Sbjct: 46  GQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDE--LWVVMEYLAGG 103
Query: 448 SLDKWIFQ-C--DGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKE 504
           SL   + + C  +G +   C E ++ L+       +LH     +V+HR+IKS N+LL  +
Sbjct: 104 SLTDVVTETCMDEGQIAAVCRECLQALE-------FLHSN---QVIHRNIKSDNILLGMD 153
Query: 505 MNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLS 564
            + +L DFG        Q   +T +VGT  ++APEV +      + D++  GI+ +E++ 
Sbjct: 154 GSVKLTDFGFCAQITPEQSKRST-MVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIE 212
Query: 565 GRRP 568
           G  P
Sbjct: 213 GEPP 216

>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain Length = 316

Iteration: 1
 Score = 65.5 bits (158), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 70/263 (26%), Positives = 124/263 (47%), Gaps = 35/263 (13%)
Query: 392 IAVKRISHENDGGTRAFLAEISSLGRL-----KHKSLVGLRGWCKREKGSLMLVYDYMEN 446
           +AVK +    D  T   L+++ S   +     KHK+++ L G C ++ G L ++ +Y   
Sbjct: 62  VAVKMLK---DDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD-GPLYVIVEYASK 117
Query: 447 GSLDKWIFQCDGSMMLSCEERIRV------LKDVAAGVLYLHEGWE----KKVLHRDIKS 496
           G+L +++       M    +  RV       KD+ +    L  G E    +K +HRD+ +
Sbjct: 118 GNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAA 177
Query: 497 SNVLLDKEMNGRLGDFGLAR-MHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGF 555
            NVL+ +    ++ DFGLAR ++       TT     V ++APE       + Q+DV+ F
Sbjct: 178 RNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSF 237
Query: 556 GILILEVLS-GRRPIEEGKPNLVEMVWELMVQGKXXXXXXXXXXXKGGFDEDEVERVLHL 614
           G+L+ E+ + G  P   G P  VE +++L+ +G            K     +E+  ++  
Sbjct: 238 GVLMWEIFTLGGSPY-PGIP--VEELFKLLKEGH--------RMDKPANCTNELYMMMR- 285
Query: 615 GLLCAYPDPRARPTMRQVVKVLE 637
              C +  P  RPT +Q+V+ L+
Sbjct: 286 --DCWHAVPSQRPTFKQLVEDLD 306

>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536 Length = 294

Iteration: 1
 Score = 65.5 bits (158), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 48/161 (29%), Positives = 81/161 (50%), Gaps = 10/161 (6%)
Query: 411 EISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRV 470
           EIS    L H+ +VG  G+ + +   + +V +     SL +          L+  E    
Sbjct: 65  EISIHRSLAHQHVVGFHGFFE-DNDFVFVVLELCRRRSLLELH---KRRKALTEPEARYY 120
Query: 471 LKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLA-RMHGHGQVASTTRV 529
           L+ +  G  YLH     +V+HRD+K  N+ L++++  ++GDFGLA ++   G+      +
Sbjct: 121 LRQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKV--L 175
Query: 530 VGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIE 570
            GT  Y+APEV S    S + DV+  G ++  +L G+ P E
Sbjct: 176 CGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFE 216

>pdb|2PEL|A Chain A, Peanut Lectin Length = 236

Iteration: 1
 Score = 65.5 bits (158), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 54/153 (35%), Positives = 73/153 (47%), Gaps = 18/153 (11%)
Query: 26  VDFVFNGFNSSN--LSLYGTATVESR-ILTLTN-STTFTIGRALYPSKIPTKRPNSSYVY 81
           V F FN F+  N  ++  G  TV S   + LTN +   ++GR LY   +      +  V 
Sbjct: 4   VSFNFNSFSEGNPAINFQGDVTVLSNGNIQLTNLNKVNSVGRVLYAMPVRIWSSATGNVA 63
Query: 82  PFSTSFIFAMAPYKGVLAGHGLVFLF------VPFHGIKGATEAQHLGLFNRTNDGNSSN 135
            F TSF F M   K      G++F        +P   I G T    LG+    +D   + 
Sbjct: 64  SFLTSFSFEMKDIKDYDPADGIIFFIAPEDTQIPAGSIGGGT----LGV----SDTKGAG 115
Query: 136 HVFGVEFDVFKNQEFNDIDENHVGIDVNSLTSV 168
           H  GVEFD + N E+ND   +HVGIDVNS+ SV
Sbjct: 116 HFVGVEFDTYSNSEYNDPPTDHVGIDVNSVDSV 148

>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic K526e Mutation Responsible For Crouzon Syndrome Length = 324

Iteration: 1
 Score = 65.5 bits (158), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 70/263 (26%), Positives = 124/263 (47%), Gaps = 35/263 (13%)
Query: 392 IAVKRISHENDGGTRAFLAEISSLGRL-----KHKSLVGLRGWCKREKGSLMLVYDYMEN 446
           +AVK +    D  T   L+++ S   +     KHK+++ L G C ++ G L ++ +Y   
Sbjct: 70  VAVKMLK---DDATEEDLSDLVSEMEMMKMIGKHKNIINLLGACTQD-GPLYVIVEYASK 125
Query: 447 GSLDKWIFQCDGSMMLSCEERIRV------LKDVAAGVLYLHEGWE----KKVLHRDIKS 496
           G+L +++       M    +  RV       KD+ +    L  G E    +K +HRD+ +
Sbjct: 126 GNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAA 185
Query: 497 SNVLLDKEMNGRLGDFGLAR-MHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGF 555
            NVL+ +    ++ DFGLAR ++       TT     V ++APE       + Q+DV+ F
Sbjct: 186 RNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSF 245
Query: 556 GILILEVLS-GRRPIEEGKPNLVEMVWELMVQGKXXXXXXXXXXXKGGFDEDEVERVLHL 614
           G+L+ E+ + G  P   G P  VE +++L+ +G            K     +E+  ++  
Sbjct: 246 GVLMWEIFTLGGSPY-PGIP--VEELFKLLKEGH--------RMDKPANCTNELYMMMR- 293
Query: 615 GLLCAYPDPRARPTMRQVVKVLE 637
              C +  P  RPT +Q+V+ L+
Sbjct: 294 --DCWHAVPSQRPTFKQLVEDLD 314

>pdb|1OFS|A Chain A, Pea Lectin-sucrose Complex Length = 187

Iteration: 1
 Score = 65.5 bits (158), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 45/140 (32%), Positives = 64/140 (45%), Gaps = 3/140 (2%)
Query: 34  NSSNLSLYGTATVESRILTLTNSTTFTIGRALYPSKIPTKRPNSSYVYPFSTSFIFAMAP 93
           +  NL   G        LTLT +   T+GRALY S I      +  V  F TSF F +  
Sbjct: 14  DQQNLIFQGDGYTTKEKLTLTKAVKNTVGRALYSSPIHIWDRETGNVANFVTSFTFVINA 73
Query: 94  YKGVLAGHGLVFLFVPFHGIKGATEAQHLGLFNRTNDGNSSNHVFGVEFDVFKNQEFNDI 153
                   G  F   P    K  T   +LG+FN + + + +     VEFD F N  ++  
Sbjct: 74  PNSYNVADGFTFFIAPVD-TKPQTGGGYLGVFN-SAEYDKTTQTVAVEFDTFYNAAWDPS 131
Query: 154 DEN-HVGIDVNSLTSVSAHA 172
           + + H+GIDVNS+ SV+  +
Sbjct: 132 NRDRHIGIDVNSIKSVNTKS 151

>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site Length = 300

Iteration: 1
 Score = 65.5 bits (158), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 56/183 (30%), Positives = 90/183 (49%), Gaps = 14/183 (7%)
Query: 389 GAEIAVK--RISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMEN 446
           G  +A+K  R+  E +G     + EIS L  L H ++V L      E   L LV++++  
Sbjct: 29  GEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTE-NKLYLVFEFLHQ 87
Query: 447 GSLDKWIFQCDGSMMLSCEERI--RVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKE 504
             L K++   D S +      +    L  +  G+ + H     +VLHRD+K  N+L++ E
Sbjct: 88  -DLKKFM---DASALTGIPLPLIKSYLFQLLQGLAFCHS---HRVLHRDLKPQNLLINTE 140
Query: 505 MNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGR-ASTQTDVFGFGILILEVL 563
              +L DFGLAR  G   V + T  V T+ Y APE+    +  ST  D++  G +  E++
Sbjct: 141 GAIKLADFGLARAFG-VPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV 199
Query: 564 SGR 566
           + R
Sbjct: 200 TRR 202

>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase 1) Length = 294

Iteration: 1
 Score = 65.5 bits (158), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 49/165 (29%), Positives = 78/165 (47%), Gaps = 18/165 (10%)
Query: 470 VLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRV 529
           +L+++  G+ YLH   E+K+ HRDIK++NVLL ++ + +L DFG+A      Q+      
Sbjct: 121 ILREILKGLDYLHS--ERKI-HRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNX-F 176
Query: 530 VGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKX 589
           VGT  ++APEV        + D++  GI  +E+  G  P  +  P  V     L +  K 
Sbjct: 177 VGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMRV-----LFLIPKN 231
Query: 590 XXXXXXXXXXKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVK 634
                     K   +  E          C   DPR RPT ++++K
Sbjct: 232 SPPTLEGQHSKPFKEFVEA---------CLNKDPRFRPTAKELLK 267

>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine Length = 299

Iteration: 1
 Score = 65.5 bits (158), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 56/183 (30%), Positives = 90/183 (49%), Gaps = 14/183 (7%)
Query: 389 GAEIAVK--RISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMEN 446
           G  +A+K  R+  E +G     + EIS L  L H ++V L      E   L LV++++  
Sbjct: 28  GEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTE-NKLYLVFEFLHQ 86
Query: 447 GSLDKWIFQCDGSMMLSCEERI--RVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKE 504
             L K++   D S +      +    L  +  G+ + H     +VLHRD+K  N+L++ E
Sbjct: 87  -DLKKFM---DASALTGIPLPLIKSYLFQLLQGLAFCHS---HRVLHRDLKPQNLLINTE 139
Query: 505 MNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGR-ASTQTDVFGFGILILEVL 563
              +L DFGLAR  G   V + T  V T+ Y APE+    +  ST  D++  G +  E++
Sbjct: 140 GAIKLADFGLARAFG-VPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV 198
Query: 564 SGR 566
           + R
Sbjct: 199 TRR 201

>pdb|1BZW|A Chain A, Peanut Lectin Complexed With C-Lactose Length = 232

Iteration: 1
 Score = 65.5 bits (158), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 54/153 (35%), Positives = 73/153 (47%), Gaps = 18/153 (11%)
Query: 26  VDFVFNGFNSSN--LSLYGTATVESR-ILTLTN-STTFTIGRALYPSKIPTKRPNSSYVY 81
           V F FN F+  N  ++  G  TV S   + LTN +   ++GR LY   +      +  V 
Sbjct: 4   VSFNFNSFSEGNPAINFQGDVTVLSNGNIQLTNLNKVNSVGRVLYAMPVRIWSSATGNVA 63
Query: 82  PFSTSFIFAMAPYKGVLAGHGLVFLF------VPFHGIKGATEAQHLGLFNRTNDGNSSN 135
            F TSF F M   K      G++F        +P   I G T    LG+    +D   + 
Sbjct: 64  SFLTSFSFEMKDIKDYDPADGIIFFIAPEDTQIPAGSIGGGT----LGV----SDTKGAG 115
Query: 136 HVFGVEFDVFKNQEFNDIDENHVGIDVNSLTSV 168
           H  GVEFD + N E+ND   +HVGIDVNS+ SV
Sbjct: 116 HFVGVEFDTYSNSEYNDPPTDHVGIDVNSVDSV 148

>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native Length = 351

Iteration: 1
 Score = 65.5 bits (158), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 53/182 (29%), Positives = 89/182 (48%), Gaps = 13/182 (7%)
Query: 411 EISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLD-KWIFQCDGSMMLSCEERIR 469
           E S    LKH  +V L      + G L +V+++M+   L  + + + D   + S      
Sbjct: 76  EASICHMLKHPHIVELLETYSSD-GMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASH 134
Query: 470 VLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNG---RLGDFGLARMHGHGQVAST 526
            ++ +   + Y H+     ++HRD+K  NVLL  + N    +LGDFG+A   G   + + 
Sbjct: 135 YMRQILEALRYCHDN---NIIHRDVKPENVLLASKENSAPVKLGDFGVAIQLGESGLVAG 191
Query: 527 TRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQ 586
            RV GT  ++APEV          DV+G G+++  +LSG  P    K    E ++E +++
Sbjct: 192 GRV-GTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTK----ERLFEGIIK 246
Query: 587 GK 588
           GK
Sbjct: 247 GK 248

>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137 Length = 309

Iteration: 1
 Score = 65.5 bits (158), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 56/183 (30%), Positives = 90/183 (49%), Gaps = 14/183 (7%)
Query: 389 GAEIAVK--RISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMEN 446
           G  +A+K  R+  E +G     + EIS L  L H ++V L      E   L LV++++  
Sbjct: 32  GEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTE-NKLYLVFEFLHQ 90
Query: 447 GSLDKWIFQCDGSMMLSCEERI--RVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKE 504
             L K++   D S +      +    L  +  G+ + H     +VLHRD+K  N+L++ E
Sbjct: 91  -DLKKFM---DASALTGIPLPLIKSYLFQLLQGLAFCHS---HRVLHRDLKPQNLLINTE 143
Query: 505 MNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGR-ASTQTDVFGFGILILEVL 563
              +L DFGLAR  G   V + T  V T+ Y APE+    +  ST  D++  G +  E++
Sbjct: 144 GAIKLADFGLARAFG-VPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV 202
Query: 564 SGR 566
           + R
Sbjct: 203 TRR 205

>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3, Stk24) In Complex With Staurosporine Length = 304

Iteration: 1
 Score = 65.5 bits (158), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 38/105 (36%), Positives = 58/105 (55%), Gaps = 4/105 (3%)
Query: 470 VLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRV 529
           +L+++  G+ YLH   EKK+ HRDIK++NVLL +    +L DFG+A      Q+      
Sbjct: 109 ILREILKGLDYLHS--EKKI-HRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNX-F 164
Query: 530 VGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKP 574
           VGT  ++APEV       ++ D++  GI  +E+  G  P  E  P
Sbjct: 165 VGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHP 209

>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6 Length = 321

Iteration: 1
 Score = 65.5 bits (158), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 49/188 (26%), Positives = 92/188 (48%), Gaps = 11/188 (5%)
Query: 388 GGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGL-RGWCKREKGSLMLVYDYMEN 446
            G ++AVK +             E+  +   +H ++V + + +   E+  L ++ ++++ 
Sbjct: 69  SGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSYLVGEE--LWVLMEFLQG 126
Query: 447 GSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMN 506
           G+L   + Q    + L+ E+   V + V   + YLH    + V+HRDIKS ++LL  +  
Sbjct: 127 GALTDIVSQ----VRLNEEQIATVCEAVLQALAYLHA---QGVIHRDIKSDSILLTLDGR 179
Query: 507 GRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGR 566
            +L DFG         V     +VGT  ++APEV S    +T+ D++  GI+++E++ G 
Sbjct: 180 VKLSDFGFC-AQISKDVPKRKXLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGE 238
Query: 567 RPIEEGKP 574
            P     P
Sbjct: 239 PPYFSDSP 246

>pdb|1AX0|A Chain A, Erythrina Corallodendron Lectin In Complex With N-Actylgalactosamine Length = 239

Iteration: 1
 Score = 65.5 bits (158), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 72/262 (27%), Positives = 108/262 (41%), Gaps = 45/262 (17%)
Query: 26  VDFVFNGFN--SSNLSLYGTATV-ESRILTLTN------STTFTIGRALYPSKIPTKRPN 76
           + F F+ F   + NL+L G A + +S +L LT           + GR LY   +      
Sbjct: 4   ISFSFSEFEPGNDNLTLQGAALITQSGVLQLTKINQNGMPAWDSTGRTLYAKPVHIWDMT 63
Query: 77  SSYVYPFSTSFIFAM-APYKGVLAGHGLVFLFVPFHGIKGATEAQHLGLFNRTNDGNSSN 135
           +  V  F T F F++  PY   L   GLVF   P    K A    +LG+FN +   NS  
Sbjct: 64  TGTVASFETRFSFSIEQPYTRPLPADGLVFFMGPTKS-KPAQGYGYLGIFNNSKQDNSY- 121
Query: 136 HVFGVEFDVFKNQEFNDIDENHVGIDVNSLTSVSAHAAGYWPDNQXXXXXXXXXXXXXXX 195
              GVEFD F N  ++     H+GIDVNS+ S+                           
Sbjct: 122 QTLGVEFDTFSN-PWDPPQVPHIGIDVNSIRSIKT------------------------- 155
Query: 196 EKSFKELKLNNGKNYQVWIDYADSFINITMVEAGMKRPKRPLLSVPLNLSGVLEDEMYVG 255
               +  +L+NG+   V I Y  S   +  V           ++  +++  VL + + VG
Sbjct: 156 ----QPFQLDNGQVANVVIKYDASSKILHAVLVYPSSGAIYTIAEIVDVKQVLPEWVDVG 211
Query: 256 FTAATG---QLVESHKILAWSF 274
            + ATG      E+H + +WSF
Sbjct: 212 LSGATGAQRDAAETHDVYSWSF 233

>pdb|3A7F|A Chain A, Human Mst3 Kinase Length = 303

Iteration: 1
 Score = 65.5 bits (158), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 40/109 (36%), Positives = 60/109 (55%), Gaps = 12/109 (11%)
Query: 470 VLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVAST--- 526
           +L+++  G+ YLH   EKK+ HRDIK++NVLL +    +L DFG+A     GQ+  T   
Sbjct: 124 ILREILKGLDYLHS--EKKI-HRDIKAANVLLSEHGEVKLADFGVA-----GQLTDTQIK 175
Query: 527 -TRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKP 574
               VGT  ++APEV       ++ D++  GI  +E+  G  P  E  P
Sbjct: 176 RNXFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHP 224

>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The Insulin Receptor Tyrosine Kinase Length = 306

Iteration: 1
 Score = 65.1 bits (157), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 65/266 (24%), Positives = 123/266 (46%), Gaps = 32/266 (12%)
Query: 388 GGAE--IAVKRISHENDGGTR-AFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYM 444
           G AE  +AVK ++       R  FL E S +       +V L G   + + +L +V + M
Sbjct: 44  GEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTL-VVMELM 102
Query: 445 ENGSLDKWIFQC-------DGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSS 497
            +G L  ++           G    + +E I++  ++A G+ YL+    KK +HR++ + 
Sbjct: 103 AHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNA---KKFVHRNLAAR 159
Query: 498 NVLLDKEMNGRLGDFGLAR-MHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFG 556
           N ++  +   ++GDFG+ R ++         + +  V ++APE    G  +T +D++ FG
Sbjct: 160 NCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFG 219
Query: 557 ILILEVLSGRRPIEEGKPNLVEMVWELMVQGKXXXXXXXXXXXKGGFDEDE--VERVLHL 614
           +++ E+ S      +G  N  E V + ++ G             G  D+ +   ERV  L
Sbjct: 220 VVLWEITSLAEQPYQGLSN--EQVLKFVMDG-------------GYLDQPDNCPERVTDL 264
Query: 615 GLLCAYPDPRARPTMRQVVKVLEGKI 640
             +C   +P  RPT  ++V +L+  +
Sbjct: 265 MRMCWQFNPNMRPTFLEIVNLLKDDL 290

>pdb|1RIN|A Chain A, X-Ray Crystal Structure Of A Pea Lectin-Trimannoside Complex At 2.6 Angstroms Resolution Length = 180

Iteration: 1
 Score = 65.1 bits (157), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 45/140 (32%), Positives = 64/140 (45%), Gaps = 3/140 (2%)
Query: 34  NSSNLSLYGTATVESRILTLTNSTTFTIGRALYPSKIPTKRPNSSYVYPFSTSFIFAMAP 93
           +  NL   G        LTLT +   T+GRALY S I      +  V  F TSF F +  
Sbjct: 14  DQQNLIFQGDGYTTKEKLTLTKAVKNTVGRALYSSPIHIWDRETGNVANFVTSFTFVINA 73
Query: 94  YKGVLAGHGLVFLFVPFHGIKGATEAQHLGLFNRTNDGNSSNHVFGVEFDVFKNQEFNDI 153
                   G  F   P    K  T   +LG+FN + + + +     VEFD F N  ++  
Sbjct: 74  PNSYNVADGFTFFIAPVD-TKPQTGGGYLGVFN-SAEYDKTTETVAVEFDTFYNAAWDPS 131
Query: 154 DEN-HVGIDVNSLTSVSAHA 172
           + + H+GIDVNS+ SV+  +
Sbjct: 132 NRDRHIGIDVNSIKSVNTKS 151

>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of Cyclin-dependent Kinase Inhibitors Identified Through Structure-based Hybridisation Length = 299

Iteration: 1
 Score = 65.1 bits (157), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 56/183 (30%), Positives = 90/183 (49%), Gaps = 14/183 (7%)
Query: 389 GAEIAVK--RISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMEN 446
           G  +A+K  R+  E +G     + EIS L  L H ++V L      E   L LV++++  
Sbjct: 28  GEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTE-NKLYLVFEFLHQ 86
Query: 447 GSLDKWIFQCDGSMMLSCEERI--RVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKE 504
             L K++   D S +      +    L  +  G+ + H     +VLHRD+K  N+L++ E
Sbjct: 87  -DLKKFM---DASALTGIPLPLIKSYLFQLLQGLSFCHS---HRVLHRDLKPQNLLINTE 139
Query: 505 MNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGR-ASTQTDVFGFGILILEVL 563
              +L DFGLAR  G   V + T  V T+ Y APE+    +  ST  D++  G +  E++
Sbjct: 140 GAIKLADFGLARAFG-VPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV 198
Query: 564 SGR 566
           + R
Sbjct: 199 TRR 201

>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic N549t Mutation Responsible For Pfeiffer Syndrome Length = 324

Iteration: 1
 Score = 65.1 bits (157), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 70/263 (26%), Positives = 124/263 (47%), Gaps = 35/263 (13%)
Query: 392 IAVKRISHENDGGTRAFLAEISSLGRL-----KHKSLVGLRGWCKREKGSLMLVYDYMEN 446
           +AVK +    D  T   L+++ S   +     KHK+++ L G C ++ G L ++ +Y   
Sbjct: 70  VAVKMLK---DDATEKDLSDLVSEMEMMKMIGKHKNIITLLGACTQD-GPLYVIVEYASK 125
Query: 447 GSLDKWIFQCDGSMMLSCEERIRV------LKDVAAGVLYLHEGWE----KKVLHRDIKS 496
           G+L +++       M    +  RV       KD+ +    L  G E    +K +HRD+ +
Sbjct: 126 GNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAA 185
Query: 497 SNVLLDKEMNGRLGDFGLAR-MHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGF 555
            NVL+ +    ++ DFGLAR ++       TT     V ++APE       + Q+DV+ F
Sbjct: 186 RNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSF 245
Query: 556 GILILEVLS-GRRPIEEGKPNLVEMVWELMVQGKXXXXXXXXXXXKGGFDEDEVERVLHL 614
           G+L+ E+ + G  P   G P  VE +++L+ +G            K     +E+  ++  
Sbjct: 246 GVLMWEIFTLGGSPY-PGIP--VEELFKLLKEGH--------RMDKPANCTNELYMMMR- 293
Query: 615 GLLCAYPDPRARPTMRQVVKVLE 637
              C +  P  RPT +Q+V+ L+
Sbjct: 294 --DCWHAVPSQRPTFKQLVEDLD 314

>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor Length = 307

Iteration: 1
 Score = 65.1 bits (157), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 62/260 (23%), Positives = 120/260 (46%), Gaps = 30/260 (11%)
Query: 392 IAVKRISHENDGGTR-AFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLD 450
           +AVK ++       R  FL E S +       +V L G   + + +L +V + M +G L 
Sbjct: 51  VAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTL-VVMELMAHGDLK 109
Query: 451 KWIFQC-------DGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDK 503
            ++           G    + +E I++  ++A G+ YL+    KK +HR++ + N ++  
Sbjct: 110 SYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNA---KKFVHRNLAARNCMVAH 166
Query: 504 EMNGRLGDFGLAR-MHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEV 562
           +   ++GDFG+ R ++         + +  V ++APE    G  +T +D++ FG+++ E+
Sbjct: 167 DFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEI 226
Query: 563 LSGRRPIEEGKPNLVEMVWELMVQGKXXXXXXXXXXXKGGFDEDE--VERVLHLGLLCAY 620
            S      +G  N  E V + ++ G             G  D+ +   ERV  L  +C  
Sbjct: 227 TSLAEQPYQGLSN--EQVLKFVMDG-------------GYLDQPDNCPERVTDLMRMCWQ 271
Query: 621 PDPRARPTMRQVVKVLEGKI 640
            +P  RPT  ++V +L+  +
Sbjct: 272 FNPNMRPTFLEIVNLLKDDL 291

>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: Inactive Double Mutant With Selenomethionine Length = 327

Iteration: 1
 Score = 65.1 bits (157), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 54/203 (26%), Positives = 94/203 (46%), Gaps = 15/203 (7%)
Query: 389 GAEIAVKRI--SHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMEN 446
           G E+AVK I  +  N    +    E+     L H ++V L    + EK +L LV +Y   
Sbjct: 39  GKEVAVKIIDKTQLNSSSLQKLFREVRIXKVLNHPNIVKLFEVIETEK-TLYLVXEYASG 97
Query: 447 GSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMN 506
           G +  ++             + R    + + V Y H+ +   ++HRD+K+ N+LLD + N
Sbjct: 98  GEVFDYLVAHGRXKEKEARAKFR---QIVSAVQYCHQKF---IVHRDLKAENLLLDADXN 151
Query: 507 GRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRAS-TQTDVFGFGILILEVLSG 565
            ++ DFG +     G         G   Y APE+F   +    + DV+  G+++  ++SG
Sbjct: 152 IKIADFGFSNEFTFGNKLDA--FCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG 209
Query: 566 RRPIEEGKPNLVEMVWELMVQGK 588
             P +    NL E+  E +++GK
Sbjct: 210 SLPFD--GQNLKEL-RERVLRGK 229

>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A Thiazolopyrimidine Inhibitor Length = 324

Iteration: 1
 Score = 65.1 bits (157), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 51/196 (26%), Positives = 100/196 (51%), Gaps = 25/196 (12%)
Query: 386 EGGGAEIAVKRIS-HENDGGTRAFLAEISSLGRL-KHKSLVGLRGWCKREKGSLMLVYDY 443
           +G   + A+KR+  + +    R F  E+  L +L  H +++ L G C+  +G L L  +Y
Sbjct: 46  DGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACE-HRGYLYLAIEY 104
Query: 444 MENGSLDKW-----IFQCDGSM--------MLSCEERIRVLKDVAAGVLYLHEGWEKKVL 490
             +G+L  +     + + D +          LS ++ +    DVA G+ YL +   K+ +
Sbjct: 105 APHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQ---KQFI 161
Query: 491 HRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRVVG--TVGYLAPEVFSSGRAST 548
           HR++ + N+L+ +    ++ DFGL+R    GQ     + +G   V ++A E  +    +T
Sbjct: 162 HRNLAARNILVGENYVAKIADFGLSR----GQEVYVKKTMGRLPVRWMAIESLNYSVYTT 217
Query: 549 QTDVFGFGILILEVLS 564
            +DV+ +G+L+ E++S
Sbjct: 218 NSDVWSYGVLLWEIVS 233

>pdb|1LTE|A Chain A, Structure Of A Legume Lectin With An Ordered N-Linked Carbohydrate In Complex With Lactose Length = 239

Iteration: 1
 Score = 65.1 bits (157), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 72/265 (27%), Positives = 112/265 (42%), Gaps = 51/265 (19%)
Query: 26  VDFVFNGFN--SSNLSLYGTATV-ESRILTLTN------STTFTIGRALYPSKIPTKRPN 76
           + F F+ F   + NL+L G + + +S +L LT           + GR LY   +      
Sbjct: 4   ISFSFSEFEPGNDNLTLQGASLITQSGVLQLTKINQNGMPAWDSTGRTLYAKPVHIWDMT 63
Query: 77  SSYVYPFSTSFIFAM-APYKGVLAGHGLVFLFVPFHGIKGATEAQHLGLFNRTNDGNSSN 135
           +  V  F T F F++  PY   L   GLVF   P    K A    +LG+FN++   NS  
Sbjct: 64  TGTVASFETRFSFSIEQPYTRPLPADGLVFFMGPTKS-KPAQGYGYLGIFNQSKQDNSY- 121
Query: 136 HVFGVEFDVFKNQEFNDIDENHVGIDVNSLTSVSAHAAGYWPDNQXXXXXXXXXXXXXXX 195
              GVEFD F N  ++     H+GIDVNS+ S+                           
Sbjct: 122 QTLGVEFDTFSN-PWDPPQVPHIGIDVNSIRSIKT------------------------- 155
Query: 196 EKSFKELKLNNGKNYQVWIDYADSFINITMVEAGMKRPKRP---LLSVPLNLSGVLEDEM 252
               +  +L+NG+   V I Y  S     ++ A +  P       ++  +++  VL + +
Sbjct: 156 ----QPFQLDNGQVANVVIKYDAS---SKLLHAVLVYPSSGAIYTIAEIVDVKQVLPEWV 208
Query: 253 YVGFTAATG---QLVESHKILAWSF 274
            VG + ATG      E+H + +WSF
Sbjct: 209 DVGLSGATGAQRDAAETHDVYSWSF 233

>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic N549h Mutation Responsible For Crouzon Syndrome. Length = 324

Iteration: 1
 Score = 64.7 bits (156), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 70/263 (26%), Positives = 124/263 (47%), Gaps = 35/263 (13%)
Query: 392 IAVKRISHENDGGTRAFLAEISSLGRL-----KHKSLVGLRGWCKREKGSLMLVYDYMEN 446
           +AVK +    D  T   L+++ S   +     KHK+++ L G C ++ G L ++ +Y   
Sbjct: 70  VAVKMLK---DDATEKDLSDLVSEMEMMKMIGKHKNIIHLLGACTQD-GPLYVIVEYASK 125
Query: 447 GSLDKWIFQCDGSMMLSCEERIRV------LKDVAAGVLYLHEGWE----KKVLHRDIKS 496
           G+L +++       M    +  RV       KD+ +    L  G E    +K +HRD+ +
Sbjct: 126 GNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAA 185
Query: 497 SNVLLDKEMNGRLGDFGLAR-MHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGF 555
            NVL+ +    ++ DFGLAR ++       TT     V ++APE       + Q+DV+ F
Sbjct: 186 RNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSF 245
Query: 556 GILILEVLS-GRRPIEEGKPNLVEMVWELMVQGKXXXXXXXXXXXKGGFDEDEVERVLHL 614
           G+L+ E+ + G  P   G P  VE +++L+ +G            K     +E+  ++  
Sbjct: 246 GVLMWEIFTLGGSPY-PGIP--VEELFKLLKEGH--------RMDKPANCTNELYMMMR- 293
Query: 615 GLLCAYPDPRARPTMRQVVKVLE 637
              C +  P  RPT +Q+V+ L+
Sbjct: 294 --DCWHAVPSQRPTFKQLVEDLD 314

>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of Cyclin-Dependent Kinase Inhibitors Identified Through Structure-Based Hybridisation Length = 299

Iteration: 1
 Score = 64.7 bits (156), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 55/185 (29%), Positives = 88/185 (47%), Gaps = 12/185 (6%)
Query: 385 LEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYM 444
           L G    +   R+  E +G     + EIS L  L H ++V L      E   L LV++++
Sbjct: 26  LTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTE-NKLYLVFEFL 84
Query: 445 ENGSLDKWIFQCDGSMMLSCEERI--RVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLD 502
               L K++   D S +      +    L  +  G+ + H     +VLHRD+K  N+L++
Sbjct: 85  HQ-DLKKFM---DASALTGIPLPLIKSYLFQLLQGLAFCHS---HRVLHRDLKPQNLLIN 137
Query: 503 KEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGR-ASTQTDVFGFGILILE 561
            E   +L DFGLAR  G   V + T  V T+ Y APE+    +  ST  D++  G +  E
Sbjct: 138 TEGAIKLADFGLARAFG-VPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAE 196
Query: 562 VLSGR 566
           +++ R
Sbjct: 197 MVTRR 201

>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino Pyrimidine Cdk4 Inhibitor Length = 298

Iteration: 1
 Score = 64.7 bits (156), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 55/185 (29%), Positives = 88/185 (47%), Gaps = 12/185 (6%)
Query: 385 LEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYM 444
           L G    +   R+  E +G     + EIS L  L H ++V L      E   L LV++++
Sbjct: 25  LTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTE-NKLYLVFEFL 83
Query: 445 ENGSLDKWIFQCDGSMMLSCEERI--RVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLD 502
               L K++   D S +      +    L  +  G+ + H     +VLHRD+K  N+L++
Sbjct: 84  HQ-DLKKFM---DASALTGIPLPLIKSYLFQLLQGLAFCHS---HRVLHRDLKPQNLLIN 136
Query: 503 KEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGR-ASTQTDVFGFGILILE 561
            E   +L DFGLAR  G   V + T  V T+ Y APE+    +  ST  D++  G +  E
Sbjct: 137 TEGAIKLADFGLARAFG-VPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAE 195
Query: 562 VLSGR 566
           +++ R
Sbjct: 196 MVTRR 200

>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B (STK17B) Length = 327

Iteration: 1
 Score = 64.7 bits (156), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 36/111 (32%), Positives = 61/111 (54%), Gaps = 8/111 (7%)
Query: 461 MLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEM---NGRLGDFGLARM 517
           M+S  + IR++K +  GV YLH+     ++H D+K  N+LL       + ++ DFG++R 
Sbjct: 127 MVSENDVIRLIKQILEGVYYLHQN---NIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRK 183
Query: 518 HGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRP 568
            GH        ++GT  YLAPE+ +    +T TD++  GI+   +L+   P
Sbjct: 184 IGHA--CELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSP 232

>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1 (Plk1) Catalytic Domain In Complex With Adp Length = 317

Iteration: 1
 Score = 64.3 bits (155), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 34/101 (33%), Positives = 57/101 (56%), Gaps = 6/101 (5%)
Query: 471 LKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLA-RMHGHGQVASTTRV 529
           ++    GV YLH     +V+HRD+K  N+ L+ +M+ ++GDFGLA ++   G+      +
Sbjct: 148 MRQTIQGVQYLHNN---RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGE--RKKXL 202
Query: 530 VGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIE 570
            GT  Y+APEV      S + D++  G ++  +L G+ P E
Sbjct: 203 CGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFE 243

>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic E565a Mutation Responsible For Pfeiffer Syndrome Length = 324

Iteration: 1
 Score = 64.3 bits (155), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 70/263 (26%), Positives = 123/263 (46%), Gaps = 35/263 (13%)
Query: 392 IAVKRISHENDGGTRAFLAEISSLGRL-----KHKSLVGLRGWCKREKGSLMLVYDYMEN 446
           +AVK +    D  T   L+++ S   +     KHK+++ L G C ++ G L ++  Y   
Sbjct: 70  VAVKMLK---DDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD-GPLYVIVAYASK 125
Query: 447 GSLDKWIFQCDGSMMLSCEERIRV------LKDVAAGVLYLHEGWE----KKVLHRDIKS 496
           G+L +++       M    +  RV       KD+ +    L  G E    +K +HRD+ +
Sbjct: 126 GNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAA 185
Query: 497 SNVLLDKEMNGRLGDFGLAR-MHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGF 555
            NVL+ +    ++ DFGLAR ++       TT     V ++APE       + Q+DV+ F
Sbjct: 186 RNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSF 245
Query: 556 GILILEVLS-GRRPIEEGKPNLVEMVWELMVQGKXXXXXXXXXXXKGGFDEDEVERVLHL 614
           G+L+ E+ + G  P   G P  VE +++L+ +G            K     +E+  ++  
Sbjct: 246 GVLMWEIFTLGGSPY-PGIP--VEELFKLLKEGH--------RMDKPANCTNELYMMMR- 293
Query: 615 GLLCAYPDPRARPTMRQVVKVLE 637
              C +  P  RPT +Q+V+ L+
Sbjct: 294 --DCWHAVPSQRPTFKQLVEDLD 314

>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target Length = 303

Iteration: 1
 Score = 64.3 bits (155), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 67/263 (25%), Positives = 113/263 (42%), Gaps = 36/263 (13%)
Query: 391 EIAVKRISHEN-DGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSL 449
           ++A+KRI+ E         L EI ++ +  H ++V         K  L LV   +  GS+
Sbjct: 42  KVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYT-SFVVKDELWLVMKLLSGGSV 100
Query: 450 DKWIFQC-----DGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKE 504
              I          S +L       +L++V  G+ YLH+  +   +HRD+K+ N+LL ++
Sbjct: 101 LDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQ---IHRDVKAGNILLGED 157
Query: 505 MNGRLGDFGLARMHGHGQVASTTRV----VGTVGYLAPEVFSSGRA-STQTDVFGFGILI 559
            + ++ DFG++     G   +  +V    VGT  ++APEV    R    + D++ FGI  
Sbjct: 158 GSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITA 217
Query: 560 LEVLSGRRPIEEGKPNLVEMV--------WELMVQGKXXXXXXXXXXXKGGFDEDEVERV 611
           +E+ +G  P  +  P  V M+         E  VQ K           K           
Sbjct: 218 IELATGAAPYHKYPPMKVLMLTLQNDPPSLETGVQDKEMLKKYGKSFRK----------- 266
Query: 612 LHLGLLCAYPDPRARPTMRQVVK 634
             +  LC   DP  RPT  ++++
Sbjct: 267 --MISLCLQKDPEKRPTAAELLR 287

>pdb|1FYU|A Chain A, Crystal Structure Of Erythrina Corallodendron Lectin In Hexagonal Crystal Form Length = 255

Iteration: 1
 Score = 64.3 bits (155), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 72/262 (27%), Positives = 108/262 (41%), Gaps = 45/262 (17%)
Query: 26  VDFVFNGFN--SSNLSLYGTATV-ESRILTLTN------STTFTIGRALYPSKIPTKRPN 76
           + F F+ F   + NL+L G A + +S +L LT           + GR LY   +      
Sbjct: 4   ISFSFSEFEPGNDNLTLQGAALITQSGVLQLTKINQNGMPAWDSTGRTLYAKPVHIWDMT 63
Query: 77  SSYVYPFSTSFIFAM-APYKGVLAGHGLVFLFVPFHGIKGATEAQHLGLFNRTNDGNSSN 135
           +  V  F T F F++  PY   L   GLVF   P    K A    +LG+FN +   NS  
Sbjct: 64  TGTVASFETRFSFSIEQPYTRPLPADGLVFFMGPTKS-KPAQGYGYLGIFNNSKQDNSY- 121
Query: 136 HVFGVEFDVFKNQEFNDIDENHVGIDVNSLTSVSAHAAGYWPDNQXXXXXXXXXXXXXXX 195
              GVEFD F N  ++     H+GIDVNS+ S+                           
Sbjct: 122 QTLGVEFDTFSN-PWDPPQVPHIGIDVNSIRSIKT------------------------- 155
Query: 196 EKSFKELKLNNGKNYQVWIDYADSFINITMVEAGMKRPKRPLLSVPLNLSGVLEDEMYVG 255
               +  +L+NG+   V I Y  S   +  V           ++  +++  VL + + VG
Sbjct: 156 ----QPFQLDNGQVANVVIKYDASSKILHAVLVYPSSGAIYTIAEIVDVKQVLPEWVDVG 211
Query: 256 FTAATG---QLVESHKILAWSF 274
            + ATG      E+H + +WSF
Sbjct: 212 LSGATGAQRDAAETHDVYSWSF 233

>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain Kinase Loc340156. Length = 373

Iteration: 1
 Score = 64.3 bits (155), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 57/203 (28%), Positives = 99/203 (48%), Gaps = 17/203 (8%)
Query: 389 GAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGS 448
           G ++A K I             EIS + +L H +L+ L       K  ++LV +Y++ G 
Sbjct: 114 GLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYD-AFESKNDIVLVMEYVDGGE 172
Query: 449 L-DKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVL-LDKEMN 506
           L D+ I   D S  L+  + I  +K +  G+ ++H+ +   +LH D+K  N+L ++++  
Sbjct: 173 LFDRII---DESYNLTELDTILFMKQICEGIRHMHQMY---ILHLDLKPENILCVNRDAK 226
Query: 507 G-RLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSG 565
             ++ DFGLAR +   +        GT  +LAPEV +    S  TD++  G++   +LSG
Sbjct: 227 QIKIIDFGLARRYKPREKLKVN--FGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSG 284
Query: 566 RRPI-----EEGKPNLVEMVWEL 583
             P       E   N++   W+L
Sbjct: 285 LSPFLGDNDAETLNNILACRWDL 307

>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n Inactivating Mutant In Apo Form Length = 303

Iteration: 1
 Score = 64.3 bits (155), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 49/197 (24%), Positives = 92/197 (46%), Gaps = 32/197 (16%)
Query: 393 AVKRISHENDGGTRAFLAEISSLGRLKHKSLVGL-RGWCKR-----------EKGSLMLV 440
           A+K+I H  +  +   L+E+  L  L H+ +V     W +R           +K +L + 
Sbjct: 35  AIKKIRHTEEKLS-TILSEVXLLASLNHQYVVRYYAAWLERRNFVKPXTAVKKKSTLFIQ 93
Query: 441 YDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVL 500
            +Y EN +L   I     ++    +E  R+ + +   + Y+H    + ++HR++K  N+ 
Sbjct: 94  XEYCENRTLYDLIHS--ENLNQQRDEYWRLFRQILEALSYIHS---QGIIHRNLKPXNIF 148
Query: 501 LDKEMNGRLGDFGLAR-MHGH------------GQVASTTRVVGTVGYLAPEVFS-SGRA 546
           +D+  N ++GDFGLA+ +H              G   + T  +GT  Y+A EV   +G  
Sbjct: 149 IDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAXYVATEVLDGTGHY 208
Query: 547 STQTDVFGFGILILEVL 563
           + + D +  GI+  E +
Sbjct: 209 NEKIDXYSLGIIFFEXI 225

>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain Length = 290

Iteration: 1
 Score = 64.3 bits (155), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 66/259 (25%), Positives = 117/259 (45%), Gaps = 28/259 (10%)
Query: 391 EIAVKRISHEN-DGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSL 449
           ++A+KRI+ E         L EI ++ +  H ++V         K  L LV   +  GS+
Sbjct: 37  KVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYT-SFVVKDELWLVMKLLSGGSV 95
Query: 450 DKWIFQC-----DGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKE 504
              I          S +L       +L++V  G+ YLH+  +   +HRD+K+ N+LL ++
Sbjct: 96  LDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQ---IHRDVKAGNILLGED 152
Query: 505 MNGRLGDFGLARMHGHGQVASTTRV----VGTVGYLAPEVFSSGRA-STQTDVFGFGILI 559
            + ++ DFG++     G   +  +V    VGT  ++APEV    R    + D++ FGI  
Sbjct: 153 GSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITA 212
Query: 560 LEVLSGRRPIEEGKPNLVEMVWELMVQGKXXXXXXXXXXXKGGFDEDEVER----VLHLG 615
           +E+ +G  P  +  P  V M   L +Q              G  D++ +++       + 
Sbjct: 213 IELATGAAPYHKYPPMKVLM---LTLQNDPPSLET------GVQDKEMLKKYGKSFRKMI 263
Query: 616 LLCAYPDPRARPTMRQVVK 634
            LC   DP  RPT  ++++
Sbjct: 264 SLCLQKDPEKRPTAAELLR 282

>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like Kinase 1 (Plk1) Catalytic Domain. Length = 317

Iteration: 1
 Score = 64.3 bits (155), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 34/101 (33%), Positives = 57/101 (56%), Gaps = 6/101 (5%)
Query: 471 LKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLA-RMHGHGQVASTTRV 529
           ++    GV YLH     +V+HRD+K  N+ L+ +M+ ++GDFGLA ++   G+      +
Sbjct: 148 MRQTIQGVQYLHNN---RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGE--RKKDL 202
Query: 530 VGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIE 570
            GT  Y+APEV      S + D++  G ++  +L G+ P E
Sbjct: 203 CGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFE 243

>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic E565g Mutation Responsible For Pfeiffer Syndrome Length = 324

Iteration: 1
 Score = 63.9 bits (154), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 70/263 (26%), Positives = 123/263 (46%), Gaps = 35/263 (13%)
Query: 392 IAVKRISHENDGGTRAFLAEISSLGRL-----KHKSLVGLRGWCKREKGSLMLVYDYMEN 446
           +AVK +    D  T   L+++ S   +     KHK+++ L G C ++ G L ++  Y   
Sbjct: 70  VAVKMLK---DDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD-GPLYVIVGYASK 125
Query: 447 GSLDKWIFQCDGSMMLSCEERIRV------LKDVAAGVLYLHEGWE----KKVLHRDIKS 496
           G+L +++       M    +  RV       KD+ +    L  G E    +K +HRD+ +
Sbjct: 126 GNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAA 185
Query: 497 SNVLLDKEMNGRLGDFGLAR-MHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGF 555
            NVL+ +    ++ DFGLAR ++       TT     V ++APE       + Q+DV+ F
Sbjct: 186 RNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSF 245
Query: 556 GILILEVLS-GRRPIEEGKPNLVEMVWELMVQGKXXXXXXXXXXXKGGFDEDEVERVLHL 614
           G+L+ E+ + G  P   G P  VE +++L+ +G            K     +E+  ++  
Sbjct: 246 GVLMWEIFTLGGSPY-PGIP--VEELFKLLKEGH--------RMDKPANCTNELYMMMR- 293
Query: 615 GLLCAYPDPRARPTMRQVVKVLE 637
              C +  P  RPT +Q+V+ L+
Sbjct: 294 --DCWHAVPSQRPTFKQLVEDLD 314

>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based Allosteric Inhibitor Xl518 (Gdc-0973), Or Related Analogs. Length = 301

Iteration: 1
 Score = 63.9 bits (154), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 60/216 (27%), Positives = 99/216 (45%), Gaps = 31/216 (14%)
Query: 389 GAEIAVKRISHENDGGTR-AFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENG 447
           G  +A K I  E     R   + E+  L       +VG  G    + G + +  ++M+ G
Sbjct: 34  GLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSD-GEISICMEHMDGG 92
Query: 448 SLDKWIFQCDGSMMLSCEERI--RVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEM 505
           SLD+ + +  G +     E+I  +V   V  G+ YL E  + K++HRD+K SN+L++   
Sbjct: 93  SLDQ-VLKKAGRI----PEQILGKVSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRG 145
Query: 506 NGRLGDFGLARMHGHGQVAS--TTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVL 563
             +L DFG++     GQ+        VGT  Y++PE       S Q+D++  G+ ++E+ 
Sbjct: 146 EIKLCDFGVS-----GQLIDEMANEFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMA 200
Query: 564 SGRRP-------------IEEGKPNLVEMVWELMVQ 586
            GR P             + E  P L   V+ L  Q
Sbjct: 201 VGRYPRPPMAIFELLDYIVNEPPPKLPSAVFSLEFQ 236

>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like Kinase 1 (Plk1) Catalytic Domain In Complex With Compound 902 Length = 301

Iteration: 1
 Score = 63.9 bits (154), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 34/101 (33%), Positives = 57/101 (56%), Gaps = 6/101 (5%)
Query: 471 LKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLA-RMHGHGQVASTTRV 529
           ++    GV YLH     +V+HRD+K  N+ L+ +M+ ++GDFGLA ++   G+      +
Sbjct: 132 MRQTIQGVQYLHNN---RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGE--RKKDL 186
Query: 530 VGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIE 570
            GT  Y+APEV      S + D++  G ++  +L G+ P E
Sbjct: 187 CGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFE 227

>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated Protein Kinase And Immunoglobulin Domains Length = 491

Iteration: 1
 Score = 63.9 bits (154), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 49/173 (28%), Positives = 83/173 (47%), Gaps = 14/173 (8%)
Query: 399 HENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDG 458
           HE+D  T     EI ++  L+H +LV L      +   ++++Y++M  G L + +   D 
Sbjct: 88  HESDKET--VRKEIQTMSVLRHPTLVNLHD-AFEDDNEMVMIYEFMSGGELFEKV--ADE 142
Query: 459 SMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLG--DFGL-A 515
              +S +E +  ++ V  G+ ++HE      +H D+K  N++   + +  L   DFGL A
Sbjct: 143 HNKMSEDEAVEYMRQVCKGLCHMHEN---NYVHLDLKPENIMFTTKRSNELKLIDFGLTA 199
Query: 516 RMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRP 568
            +     V  TT   GT  + APEV         TD++  G+L   +LSG  P
Sbjct: 200 HLDPKQSVKVTT---GTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSP 249

>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM IONS Length = 296

Iteration: 1
 Score = 63.9 bits (154), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 55/183 (30%), Positives = 89/183 (48%), Gaps = 14/183 (7%)
Query: 389 GAEIAVK--RISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMEN 446
           G  +A+K  R+  E +G     + EIS L  L H ++V L      E   L LV++++  
Sbjct: 27  GEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTE-NKLYLVFEFLHQ 85
Query: 447 GSLDKWIFQCDGSMMLSCEERI--RVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKE 504
             L K++   D S +      +    L  +  G+ + H     +VLHRD+K  N+L++ E
Sbjct: 86  -DLKKFM---DASALTGIPLPLIKSYLFQLLQGLAFCHS---HRVLHRDLKPQNLLINTE 138
Query: 505 MNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGR-ASTQTDVFGFGILILEVL 563
              +L DFGLAR  G   V +    V T+ Y APE+    +  ST  D++  G +  E++
Sbjct: 139 GAIKLADFGLARAFG-VPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV 197
Query: 564 SGR 566
           + R
Sbjct: 198 TRR 200

>pdb|1GZ9|A Chain A, High-Resolution Crystal Structure Of Erythrina Cristagalli Lectin In Complex With 2'-Alpha-L-Fucosyllactose Length = 239

Iteration: 1
 Score = 63.9 bits (154), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 71/262 (27%), Positives = 107/262 (40%), Gaps = 45/262 (17%)
Query: 26  VDFVFNGFN--SSNLSLYGTATV-ESRILTLTN------STTFTIGRALYPSKIPTKRPN 76
           + F F+ F   + NL+L G A + +S +L LT           + GR LY   +      
Sbjct: 4   ISFSFSEFEPGNDNLTLQGAALITQSGVLQLTKINQNGMPAWDSTGRTLYTKPVHMWDST 63
Query: 77  SSYVYPFSTSFIFAM-APYKGVLAGHGLVFLFVPFHGIKGATEAQHLGLFNRTNDGNSSN 135
           +  V  F T F F++  PY   L   GLVF   P    K A    +LG+FN +   NS  
Sbjct: 64  TGTVASFETRFSFSIEQPYTRPLPADGLVFFMGPTKS-KPAQGYGYLGVFNNSKQDNSY- 121
Query: 136 HVFGVEFDVFKNQEFNDIDENHVGIDVNSLTSVSAHAAGYWPDNQXXXXXXXXXXXXXXX 195
               VEFD F N  ++     H+GIDVNS+ S+                           
Sbjct: 122 QTLAVEFDTFSN-PWDPPQVPHIGIDVNSIRSIKT------------------------- 155
Query: 196 EKSFKELKLNNGKNYQVWIDYADSFINITMVEAGMKRPKRPLLSVPLNLSGVLEDEMYVG 255
               +  +L+NG+   V I Y      + +V           ++  +++  VL D + VG
Sbjct: 156 ----QPFQLDNGQVANVVIKYDAPSKILHVVLVYPSSGAIYTIAEIVDVKQVLPDWVDVG 211
Query: 256 FTAATG---QLVESHKILAWSF 274
            + ATG      E+H + +WSF
Sbjct: 212 LSGATGAQRDAAETHDVYSWSF 233

>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5 Length = 317

Iteration: 1
 Score = 63.9 bits (154), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 48/181 (26%), Positives = 86/181 (47%), Gaps = 11/181 (6%)
Query: 389 GAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGS-LMLVYDYMENG 447
           G ++AVK++             E+  +    H ++V +  +     G  L +V +++E G
Sbjct: 70  GKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHDNVVDM--YSSYLVGDELWVVMEFLEGG 127
Query: 448 SLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNG 507
           +L   +        ++ E+   V   V   + YLH    + V+HRDIKS ++LL  +   
Sbjct: 128 ALTDIVTHTR----MNEEQIATVCLSVLRALSYLHN---QGVIHRDIKSDSILLTSDGRI 180
Query: 508 RLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRR 567
           +L DFG        +V     +VGT  ++APEV S     T+ D++  GI+++E++ G  
Sbjct: 181 KLSDFGFC-AQVSKEVPKRKXLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEP 239
Query: 568 P 568
           P
Sbjct: 240 P 240

>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating Kinase 1 (Ask1) With Imidazopyridine Inhibitor Length = 269

Iteration: 1
 Score = 63.5 bits (153), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 53/189 (28%), Positives = 91/189 (48%), Gaps = 11/189 (5%)
Query: 392 IAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDK 451
           IA+K I   +   ++    EI+    LKHK++V   G    E G + +  + +  GSL  
Sbjct: 36  IAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFS-ENGFIKIFMEQVPGGSLSA 94
Query: 452 WIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNG--RL 509
            +    G +  + +      K +  G+ YLH+    +++HRDIK  NVL++   +G  ++
Sbjct: 95  LLRSKWGPLKDNEQTIGFYTKQILEGLKYLHD---NQIVHRDIKGDNVLINT-YSGVLKI 150
Query: 510 GDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRA--STQTDVFGFGILILEVLSGRR 567
            DFG ++    G    T    GT+ Y+APE+   G        D++  G  I+E+ +G+ 
Sbjct: 151 SDFGTSKRLA-GINPCTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKP 209
Query: 568 PIEE-GKPN 575
           P  E G+P 
Sbjct: 210 PFYELGEPQ 218

>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With The Inhibitor Indirubin-5-Sulphonate Bound Length = 297

Iteration: 1
 Score = 63.5 bits (153), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 55/183 (30%), Positives = 89/183 (48%), Gaps = 14/183 (7%)
Query: 389 GAEIAVK--RISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMEN 446
           G  +A+K  R+  E +G     + EIS L  L H ++V L      E   L LV++++  
Sbjct: 28  GEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTE-NKLYLVFEFLHQ 86
Query: 447 GSLDKWIFQCDGSMMLSCEERI--RVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKE 504
             L K++   D S +      +    L  +  G+ + H     +VLHRD+K  N+L++ E
Sbjct: 87  -DLKKFM---DASALTGIPLPLIKSYLFQLLQGLAFCHS---HRVLHRDLKPQNLLINTE 139
Query: 505 MNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGR-ASTQTDVFGFGILILEVL 563
              +L DFGLAR  G   V +    V T+ Y APE+    +  ST  D++  G +  E++
Sbjct: 140 GAIKLADFGLARAFG-VPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV 198
Query: 564 SGR 566
           + R
Sbjct: 199 TRR 201

>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans (Fn31-Nl-Kin-Crd-Ig26) Length = 573

Iteration: 1
 Score = 63.5 bits (153), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 49/173 (28%), Positives = 83/173 (47%), Gaps = 14/173 (8%)
Query: 399 HENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDG 458
           HE+D  T     EI ++  L+H +LV L      +   ++++Y++M  G L + +   D 
Sbjct: 194 HESDKET--VRKEIQTMSVLRHPTLVNLHD-AFEDDNEMVMIYEFMSGGELFEKV--ADE 248
Query: 459 SMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLG--DFGL-A 515
              +S +E +  ++ V  G+ ++HE      +H D+K  N++   + +  L   DFGL A
Sbjct: 249 HNKMSEDEAVEYMRQVCKGLCHMHEN---NYVHLDLKPENIMFTTKRSNELKLIDFGLTA 305
Query: 516 RMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRP 568
            +     V  TT   GT  + APEV         TD++  G+L   +LSG  P
Sbjct: 306 HLDPKQSVKVTT---GTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSP 355

>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic Length = 298

Iteration: 1
 Score = 63.5 bits (153), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 55/183 (30%), Positives = 89/183 (48%), Gaps = 14/183 (7%)
Query: 389 GAEIAVK--RISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMEN 446
           G  +A+K  R+  E +G     + EIS L  L H ++V L      E   L LV++++  
Sbjct: 29  GEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTE-NKLYLVFEFLHQ 87
Query: 447 GSLDKWIFQCDGSMMLSCEERI--RVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKE 504
             L K++   D S +      +    L  +  G+ + H     +VLHRD+K  N+L++ E
Sbjct: 88  -DLKKFM---DASALTGIPLPLIKSYLFQLLQGLAFCHS---HRVLHRDLKPQNLLINTE 140
Query: 505 MNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGR-ASTQTDVFGFGILILEVL 563
              +L DFGLAR  G   V +    V T+ Y APE+    +  ST  D++  G +  E++
Sbjct: 141 GAIKLADFGLARAFG-VPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV 199
Query: 564 SGR 566
           + R
Sbjct: 200 TRR 202

>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex With Atp Length = 301

Iteration: 1
 Score = 63.5 bits (153), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 55/183 (30%), Positives = 89/183 (48%), Gaps = 14/183 (7%)
Query: 389 GAEIAVK--RISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMEN 446
           G  +A+K  R+  E +G     + EIS L  L H ++V L      E   L LV++++  
Sbjct: 31  GEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTE-NKLYLVFEFLHQ 89
Query: 447 GSLDKWIFQCDGSMMLSCEERI--RVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKE 504
             L K++   D S +      +    L  +  G+ + H     +VLHRD+K  N+L++ E
Sbjct: 90  -DLKKFM---DASALTGIPLPLIKSYLFQLLQGLAFCHS---HRVLHRDLKPQNLLINTE 142
Query: 505 MNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGR-ASTQTDVFGFGILILEVL 563
              +L DFGLAR  G   V +    V T+ Y APE+    +  ST  D++  G +  E++
Sbjct: 143 GAIKLADFGLARAFG-VPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV 201
Query: 564 SGR 566
           + R
Sbjct: 202 TRR 204

>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A 2-amino-4- Heteroaryl-pyrimidine Inhibitor Length = 301

Iteration: 1
 Score = 63.5 bits (153), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 55/183 (30%), Positives = 89/183 (48%), Gaps = 14/183 (7%)
Query: 389 GAEIAVK--RISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMEN 446
           G  +A+K  R+  E +G     + EIS L  L H ++V L      E   L LV++++  
Sbjct: 30  GEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTE-NKLYLVFEFLHQ 88
Query: 447 GSLDKWIFQCDGSMMLSCEERI--RVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKE 504
             L K++   D S +      +    L  +  G+ + H     +VLHRD+K  N+L++ E
Sbjct: 89  -DLKKFM---DASALTGIPLPLIKSYLFQLLQGLAFCHS---HRVLHRDLKPQNLLINTE 141
Query: 505 MNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGR-ASTQTDVFGFGILILEVL 563
              +L DFGLAR  G   V +    V T+ Y APE+    +  ST  D++  G +  E++
Sbjct: 142 GAIKLADFGLARAFG-VPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV 200
Query: 564 SGR 566
           + R
Sbjct: 201 TRR 203

>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E Length = 298

Iteration: 1
 Score = 63.5 bits (153), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 55/183 (30%), Positives = 89/183 (48%), Gaps = 14/183 (7%)
Query: 389 GAEIAVK--RISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMEN 446
           G  +A+K  R+  E +G     + EIS L  L H ++V L      E   L LV++++  
Sbjct: 28  GEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTE-NKLYLVFEFLHQ 86
Query: 447 GSLDKWIFQCDGSMMLSCEERI--RVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKE 504
             L K++   D S +      +    L  +  G+ + H     +VLHRD+K  N+L++ E
Sbjct: 87  -DLKKFM---DASALTGIPLPLIKSYLFQLLQGLAFCHS---HRVLHRDLKPQNLLINTE 139
Query: 505 MNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGR-ASTQTDVFGFGILILEVL 563
              +L DFGLAR  G   V +    V T+ Y APE+    +  ST  D++  G +  E++
Sbjct: 140 GAIKLADFGLARAFG-VPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV 198
Query: 564 SGR 566
           + R
Sbjct: 199 TRR 201

>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A Length = 298

Iteration: 1
 Score = 63.5 bits (153), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 55/183 (30%), Positives = 89/183 (48%), Gaps = 14/183 (7%)
Query: 389 GAEIAVK--RISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMEN 446
           G  +A+K  R+  E +G     + EIS L  L H ++V L      E   L LV++++  
Sbjct: 27  GEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTE-NKLYLVFEFLHQ 85
Query: 447 GSLDKWIFQCDGSMMLSCEERI--RVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKE 504
             L K++   D S +      +    L  +  G+ + H     +VLHRD+K  N+L++ E
Sbjct: 86  -DLKKFM---DASALTGIPLPLIKSYLFQLLQGLAFCHS---HRVLHRDLKPQNLLINTE 138
Query: 505 MNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGR-ASTQTDVFGFGILILEVL 563
              +L DFGLAR  G   V +    V T+ Y APE+    +  ST  D++  G +  E++
Sbjct: 139 GAIKLADFGLARAFG-VPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV 197
Query: 564 SGR 566
           + R
Sbjct: 198 TRR 200

>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex Length = 299

Iteration: 1
 Score = 63.5 bits (153), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 55/183 (30%), Positives = 89/183 (48%), Gaps = 14/183 (7%)
Query: 389 GAEIAVK--RISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMEN 446
           G  +A+K  R+  E +G     + EIS L  L H ++V L      E   L LV++++  
Sbjct: 28  GEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTE-NKLYLVFEFLHQ 86
Query: 447 GSLDKWIFQCDGSMMLSCEERI--RVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKE 504
             L K++   D S +      +    L  +  G+ + H     +VLHRD+K  N+L++ E
Sbjct: 87  -DLKKFM---DASALTGIPLPLIKSYLFQLLQGLAFCHS---HRVLHRDLKPQNLLINTE 139
Query: 505 MNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGR-ASTQTDVFGFGILILEVL 563
              +L DFGLAR  G   V +    V T+ Y APE+    +  ST  D++  G +  E++
Sbjct: 140 GAIKLADFGLARAFG-VPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV 198
Query: 564 SGR 566
           + R
Sbjct: 199 TRR 201

>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300

Iteration: 1
 Score = 63.5 bits (153), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 55/183 (30%), Positives = 89/183 (48%), Gaps = 14/183 (7%)
Query: 389 GAEIAVK--RISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMEN 446
           G  +A+K  R+  E +G     + EIS L  L H ++V L      E   L LV++++  
Sbjct: 30  GEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTE-NKLYLVFEFLHQ 88
Query: 447 GSLDKWIFQCDGSMMLSCEERI--RVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKE 504
             L K++   D S +      +    L  +  G+ + H     +VLHRD+K  N+L++ E
Sbjct: 89  -DLKKFM---DASALTGIPLPLIKSYLFQLLQGLAFCHS---HRVLHRDLKPQNLLINTE 141
Query: 505 MNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGR-ASTQTDVFGFGILILEVL 563
              +L DFGLAR  G   V +    V T+ Y APE+    +  ST  D++  G +  E++
Sbjct: 142 GAIKLADFGLARAFG-VPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV 200
Query: 564 SGR 566
           + R
Sbjct: 201 TRR 203

>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX WITH THE Inhibitor Meriolin 3 Length = 300

Iteration: 1
 Score = 63.5 bits (153), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 55/183 (30%), Positives = 89/183 (48%), Gaps = 14/183 (7%)
Query: 389 GAEIAVK--RISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMEN 446
           G  +A+K  R+  E +G     + EIS L  L H ++V L      E   L LV++++  
Sbjct: 29  GEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTE-NKLYLVFEFLHQ 87
Query: 447 GSLDKWIFQCDGSMMLSCEERI--RVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKE 504
             L K++   D S +      +    L  +  G+ + H     +VLHRD+K  N+L++ E
Sbjct: 88  -DLKKFM---DASALTGIPLPLIKSYLFQLLQGLAFCHS---HRVLHRDLKPQNLLINTE 140
Query: 505 MNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGR-ASTQTDVFGFGILILEVL 563
              +L DFGLAR  G   V +    V T+ Y APE+    +  ST  D++  G +  E++
Sbjct: 141 GAIKLADFGLARAFG-VPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV 199
Query: 564 SGR 566
           + R
Sbjct: 200 TRR 202

>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I Tgf-Beta Receptor In Complex With Fkbp12 Length = 342

Iteration: 1
 Score = 63.5 bits (153), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 57/195 (29%), Positives = 93/195 (47%), Gaps = 30/195 (15%)
Query: 389 GAEIAVKRISHENDGGTRAFL--AEISSLGRLKHKSLVGLRGWCKREKGS---LMLVYDY 443
           G E+AVK  S   +   R++   AEI     L+H++++G      ++ G+   L LV DY
Sbjct: 65  GEEVAVKIFSSREE---RSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDY 121
Query: 444 MENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLH------EGWEKKVLHRDIKSS 497
            E+GSL    F       ++ E  I++    A+G+ +LH      +G +  + HRD+KS 
Sbjct: 122 HEHGSL----FDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQG-KPAIAHRDLKSK 176
Query: 498 NVLLDKEMNGRLGDFGLARMHGHG----QVASTTRVVGTVGYLAPEVFSSG------RAS 547
           N+L+ K     + D GLA  H        +A   R VGT  Y+APEV           + 
Sbjct: 177 NILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHR-VGTKRYMAPEVLDDSINMKHFESF 235
Query: 548 TQTDVFGFGILILEV 562
            + D++  G++  E+
Sbjct: 236 KRADIYAMGLVFWEI 250

>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed With A 2-arylamino-4-cyclohexylmethyl-5-nitroso-6- aminopyrimidine Inhibitor Length = 302

Iteration: 1
 Score = 63.5 bits (153), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 55/183 (30%), Positives = 89/183 (48%), Gaps = 14/183 (7%)
Query: 389 GAEIAVK--RISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMEN 446
           G  +A+K  R+  E +G     + EIS L  L H ++V L      E   L LV++++  
Sbjct: 31  GEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTE-NKLYLVFEFLHQ 89
Query: 447 GSLDKWIFQCDGSMMLSCEERI--RVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKE 504
             L K++   D S +      +    L  +  G+ + H     +VLHRD+K  N+L++ E
Sbjct: 90  -DLKKFM---DASALTGIPLPLIKSYLFQLLQGLAFCHS---HRVLHRDLKPQNLLINTE 142
Query: 505 MNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGR-ASTQTDVFGFGILILEVL 563
              +L DFGLAR  G   V +    V T+ Y APE+    +  ST  D++  G +  E++
Sbjct: 143 GAIKLADFGLARAFG-VPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV 201
Query: 564 SGR 566
           + R
Sbjct: 202 TRR 204

>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300

Iteration: 1
 Score = 63.5 bits (153), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 55/183 (30%), Positives = 89/183 (48%), Gaps = 14/183 (7%)
Query: 389 GAEIAVK--RISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMEN 446
           G  +A+K  R+  E +G     + EIS L  L H ++V L      E   L LV++++  
Sbjct: 30  GEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTE-NKLYLVFEFLHQ 88
Query: 447 GSLDKWIFQCDGSMMLSCEERI--RVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKE 504
             L K++   D S +      +    L  +  G+ + H     +VLHRD+K  N+L++ E
Sbjct: 89  -DLKKFM---DASALTGIPLPLIKSYLFQLLQGLAFCHS---HRVLHRDLKPENLLINTE 141
Query: 505 MNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGR-ASTQTDVFGFGILILEVL 563
              +L DFGLAR  G   V +    V T+ Y APE+    +  ST  D++  G +  E++
Sbjct: 142 GAIKLADFGLARAFG-VPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV 200
Query: 564 SGR 566
           + R
Sbjct: 201 TRR 203

>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound To Ldn- 193189 Length = 305

Iteration: 1
 Score = 63.2 bits (152), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 76/279 (27%), Positives = 119/279 (42%), Gaps = 41/279 (14%)
Query: 389 GAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGS---LMLVYDYME 445
           G  +AVK I    D  +     EI +   L+H +++G        + S   L L+  Y E
Sbjct: 31  GESVAVK-IFSSRDEQSWFRETEIYNTVLLRHDNILGFIASDMTSRNSSTQLWLITHYHE 89
Query: 446 NGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLH------EGWEKKVLHRDIKSSNV 499
           +GSL  ++ +      L     +R+    A G+ +LH      +G +  + HRD KS NV
Sbjct: 90  HGSLYDFLQR----QTLEPHLALRLAVSAACGLAHLHVEIFGTQG-KPAIAHRDFKSRNV 144
Query: 500 LLDKEMNGRLGDFGLARMHGHG----QVASTTRVVGTVGYLAPEVFSSG------RASTQ 549
           L+   +   + D GLA MH  G     + +  R VGT  Y+APEV           +   
Sbjct: 145 LVKSNLQCCIADLGLAVMHSQGSDYLDIGNNPR-VGTKRYMAPEVLDEQIRTDCFESYKW 203
Query: 550 TDVFGFGILILEVLSGRRPI-----EEGKPNLVEMV-----WELMVQGKXXXXXXXXXXX 599
           TD++ FG+++ E+   RR I     E+ +P   ++V     +E M   K           
Sbjct: 204 TDIWAFGLVLWEI--ARRTIVNGIVEDYRPPFYDVVPNDPSFEDM--KKVVCVDQQTPTI 259
Query: 600 KGGFDEDEVERVL-HLGLLCAYPDPRARPTMRQVVKVLE 637
                 D V   L  +   C YP+P AR T  ++ K L+
Sbjct: 260 PNRLAADPVLSGLAQMMRECWYPNPSARLTALRIKKTLQ 298

>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide Substrate Complex: Kinase Substrate Recognition Length = 277

Iteration: 1
 Score = 63.2 bits (152), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 45/169 (26%), Positives = 83/169 (49%), Gaps = 16/169 (9%)
Query: 407 AFLAEISSLGRLK-HKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCE 465
           A L E+  L ++  H +++ L+           LV+D M+ G L  ++ +    + LS +
Sbjct: 56  ATLKEVDILRKVSGHPNIIQLKD-TYETNTFFFLVFDLMKKGELFDYLTE---KVTLSEK 111
Query: 466 ERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVAS 525
           E  ++++ +   +  LH+     ++HRD+K  N+LLD +MN +L DFG +     G+   
Sbjct: 112 ETRKIMRALLEVICALHK---LNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGE--K 166
Query: 526 TTRVVGTVGYLAPEVFSSGRAST------QTDVFGFGILILEVLSGRRP 568
              V GT  YLAPE+              + D++  G+++  +L+G  P
Sbjct: 167 LREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPP 215

>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED With The Inhibitor Nu2058 Length = 303

Iteration: 1
 Score = 63.2 bits (152), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 55/183 (30%), Positives = 89/183 (48%), Gaps = 14/183 (7%)
Query: 389 GAEIAVK--RISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMEN 446
           G  +A+K  R+  E +G     + EIS L  L H ++V L      E   L LV++++  
Sbjct: 32  GEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTE-NKLYLVFEFLHQ 90
Query: 447 GSLDKWIFQCDGSMMLSCEERI--RVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKE 504
             L K++   D S +      +    L  +  G+ + H     +VLHRD+K  N+L++ E
Sbjct: 91  -DLKKFM---DASALTGIPLPLIKSYLFQLLQGLAFCHS---HRVLHRDLKPQNLLINTE 143
Query: 505 MNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGR-ASTQTDVFGFGILILEVL 563
              +L DFGLAR  G   V +    V T+ Y APE+    +  ST  D++  G +  E++
Sbjct: 144 GAIKLADFGLARAFG-VPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV 202
Query: 564 SGR 566
           + R
Sbjct: 203 TRR 205

>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 Complex With Atp Length = 299

Iteration: 1
 Score = 63.2 bits (152), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 55/183 (30%), Positives = 89/183 (48%), Gaps = 14/183 (7%)
Query: 389 GAEIAVK--RISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMEN 446
           G  +A+K  R+  E +G     + EIS L  L H ++V L      E   L LV++++  
Sbjct: 29  GEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTE-NKLYLVFEFLHQ 87
Query: 447 GSLDKWIFQCDGSMMLSCEERI--RVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKE 504
             L K++   D S +      +    L  +  G+ + H     +VLHRD+K  N+L++ E
Sbjct: 88  -DLKKFM---DASALTGIPLPLIKSYLFQLLQGLAFCHS---HRVLHRDLKPENLLINTE 140
Query: 505 MNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGR-ASTQTDVFGFGILILEVL 563
              +L DFGLAR  G   V +    V T+ Y APE+    +  ST  D++  G +  E++
Sbjct: 141 GAIKLADFGLARAFG-VPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV 199
Query: 564 SGR 566
           + R
Sbjct: 200 TRR 202

>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp Site Inhibitor Length = 301

Iteration: 1
 Score = 63.2 bits (152), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 57/195 (29%), Positives = 93/195 (47%), Gaps = 30/195 (15%)
Query: 389 GAEIAVKRISHENDGGTRAFL--AEISSLGRLKHKSLVGLRGWCKREKGS---LMLVYDY 443
           G E+AVK  S   +   R++   AEI     L+H++++G      ++ G+   L LV DY
Sbjct: 27  GEEVAVKIFSSREE---RSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDY 83
Query: 444 MENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLH------EGWEKKVLHRDIKSS 497
            E+GSL    F       ++ E  I++    A+G+ +LH      +G +  + HRD+KS 
Sbjct: 84  HEHGSL----FDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQG-KPAIAHRDLKSK 138
Query: 498 NVLLDKEMNGRLGDFGLARMHGHG----QVASTTRVVGTVGYLAPEVFSSG------RAS 547
           N+L+ K     + D GLA  H        +A   R VGT  Y+APEV           + 
Sbjct: 139 NILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHR-VGTKRYMAPEVLDDSINMKHFESF 197
Query: 548 TQTDVFGFGILILEV 562
            + D++  G++  E+
Sbjct: 198 KRADIYAMGLVFWEI 212

>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A 3,4,5-Trimethoxy Aniline Containing Pyrimidine Length = 309

Iteration: 1
 Score = 63.2 bits (152), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 45/170 (26%), Positives = 84/170 (49%), Gaps = 14/170 (8%)
Query: 406 RAFLAEISSLGRLKHK-SLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMM--- 461
           RA ++E+  L  + H  ++V L G C +  G LM++ ++ + G+L  ++       +   
Sbjct: 75  RALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYK 134
Query: 462 ------LSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLA 515
                 L+ E  I     VA G+ +L     +K +HRD+ + N+LL ++   ++ DFGLA
Sbjct: 135 DLYKDFLTLEHLIXYSFQVAKGMEFLAS---RKXIHRDLAARNILLSEKNVVKIXDFGLA 191
Query: 516 R-MHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLS 564
           R ++              + ++APE       + Q+DV+ FG+L+ E+ S
Sbjct: 192 RDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 241

>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B Length = 289

Iteration: 1
 Score = 63.2 bits (152), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 55/183 (30%), Positives = 89/183 (48%), Gaps = 14/183 (7%)
Query: 389 GAEIAVK--RISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMEN 446
           G  +A+K  R+  E +G     + EIS L  L H ++V L      E   L LV++++  
Sbjct: 28  GEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTE-NKLYLVFEFLHQ 86
Query: 447 GSLDKWIFQCDGSMMLSCEERI--RVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKE 504
             L K++   D S +      +    L  +  G+ + H     +VLHRD+K  N+L++ E
Sbjct: 87  -DLKKFM---DASALTGIPLPLIKSYLFQLLQGLAFCHS---HRVLHRDLKPQNLLINTE 139
Query: 505 MNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGR-ASTQTDVFGFGILILEVL 563
              +L DFGLAR  G   V +    V T+ Y APE+    +  ST  D++  G +  E++
Sbjct: 140 GAIKLADFGLARAFG-VPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV 198
Query: 564 SGR 566
           + R
Sbjct: 199 TRR 201

>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase Kinase 5 Length = 295

Iteration: 1
 Score = 63.2 bits (152), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 53/189 (28%), Positives = 91/189 (48%), Gaps = 11/189 (5%)
Query: 392 IAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDK 451
           IA+K I   +   ++    EI+    LKHK++V   G    E G + +  + +  GSL  
Sbjct: 50  IAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFS-ENGFIKIFMEQVPGGSLSA 108
Query: 452 WIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNG--RL 509
            +    G +  + +      K +  G+ YLH+    +++HRDIK  NVL++   +G  ++
Sbjct: 109 LLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDN---QIVHRDIKGDNVLINT-YSGVLKI 164
Query: 510 GDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRA--STQTDVFGFGILILEVLSGRR 567
            DFG ++    G    T    GT+ Y+APE+   G        D++  G  I+E+ +G+ 
Sbjct: 165 SDFGTSKRLA-GINPCTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKP 223
Query: 568 PIEE-GKPN 575
           P  E G+P 
Sbjct: 224 PFYELGEPQ 232

>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Inhibitor Length = 326

Iteration: 1
 Score = 63.2 bits (152), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 57/195 (29%), Positives = 93/195 (47%), Gaps = 30/195 (15%)
Query: 389 GAEIAVKRISHENDGGTRAFL--AEISSLGRLKHKSLVGLRGWCKREKGS---LMLVYDY 443
           G E+AVK  S   +   R++   AEI     L+H++++G      ++ G+   L LV DY
Sbjct: 52  GEEVAVKIFSSREE---RSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDY 108
Query: 444 MENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLH------EGWEKKVLHRDIKSS 497
            E+GSL    F       ++ E  I++    A+G+ +LH      +G +  + HRD+KS 
Sbjct: 109 HEHGSL----FDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQG-KPAIAHRDLKSK 163
Query: 498 NVLLDKEMNGRLGDFGLARMHGHG----QVASTTRVVGTVGYLAPEVFSSG------RAS 547
           N+L+ K     + D GLA  H        +A   R VGT  Y+APEV           + 
Sbjct: 164 NILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHR-VGTKRYMAPEVLDDSINMKHFESF 222
Query: 548 TQTDVFGFGILILEV 562
            + D++  G++  E+
Sbjct: 223 KRADIYAMGLVFWEI 237

>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase, Kinase: An Active Protein Kinase Complexed With Nucleotide, Substrate-Analogue And Product Length = 298

Iteration: 1
 Score = 63.2 bits (152), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 45/169 (26%), Positives = 83/169 (49%), Gaps = 16/169 (9%)
Query: 407 AFLAEISSLGRLK-HKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCE 465
           A L E+  L ++  H +++ L+           LV+D M+ G L  ++ +    + LS +
Sbjct: 69  ATLKEVDILRKVSGHPNIIQLKD-TYETNTFFFLVFDLMKKGELFDYLTE---KVTLSEK 124
Query: 466 ERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVAS 525
           E  ++++ +   +  LH+     ++HRD+K  N+LLD +MN +L DFG +     G+   
Sbjct: 125 ETRKIMRALLEVICALHK---LNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGE--K 179
Query: 526 TTRVVGTVGYLAPEVFSSGRAST------QTDVFGFGILILEVLSGRRP 568
              V GT  YLAPE+              + D++  G+++  +L+G  P
Sbjct: 180 LREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPP 228

>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex With The Imidazo[1,2-B]pyridazine Inhibitor K00135 Length = 301

Iteration: 1
 Score = 63.2 bits (152), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 73/277 (26%), Positives = 122/277 (44%), Gaps = 39/277 (14%)
Query: 389 GAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRG---WCKREKGSLMLVYDYME 445
           G  +AVK I    D  +     E+ +   L+H++++G        +     L L+  Y E
Sbjct: 31  GENVAVK-IFSSRDEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLWLITHYHE 89
Query: 446 NGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLH------EGWEKKVLHRDIKSSNV 499
            GSL  ++ Q      +SC   +R++  +A+G+ +LH      +G +  + HRD+KS N+
Sbjct: 90  MGSLYDYL-QLTTLDTVSC---LRIVLSIASGLAHLHIEIFGTQG-KPAIAHRDLKSKNI 144
Query: 500 LLDKEMNGRLGDFGLARMHGHG----QVASTTRVVGTVGYLAPEVFSSG------RASTQ 549
           L+ K     + D GLA MH        V +  R VGT  Y+APEV           +  +
Sbjct: 145 LVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPR-VGTKRYMAPEVLDETIQVDCFDSYKR 203
Query: 550 TDVFGFGILILEVLSGRRPIEEG-----KPNLVEMV-----WELMVQGKXXXXXXXXXXX 599
            D++ FG+++ EV   RR +  G     KP   ++V     +E M +             
Sbjct: 204 VDIWAFGLVLWEV--ARRMVSNGIVEDYKPPFYDVVPNDPSFEDMRKVVCVDQQRPNIPN 261
Query: 600 KGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVL 636
           +  F +  +  +  L   C Y +P AR T  ++ K L
Sbjct: 262 R-WFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTL 297

>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp Length = 298

Iteration: 1
 Score = 63.2 bits (152), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 70/272 (25%), Positives = 118/272 (43%), Gaps = 54/272 (19%)
Query: 391 EIAVKRISHEND-GGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSL 449
           + A+K +S   +     AFL E   +  L H +++ L G     +G   ++  YM +G L
Sbjct: 51  QCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVLLPYMCHGDL 110
Query: 450 DKWIFQCDGSMMLSCEERIRVLKD-------VAAGVLYLHEGWEKKVLHRDIKSSNVLLD 502
            ++I            +R   +KD       VA G+ YL E   +K +HRD+ + N +LD
Sbjct: 111 LQFI---------RSPQRNPTVKDLISFGLQVARGMEYLAE---QKFVHRDLAARNCMLD 158
Query: 503 KEMNGRLGDFGLAR-----------MHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTD 551
           +    ++ DFGLAR            H H ++         V + A E   + R +T++D
Sbjct: 159 ESFTVKVADFGLARDILDREYYSVQQHRHARLP--------VKWTALESLQTYRFTTKSD 210
Query: 552 VFGFGILILEVLS-GRRPIEEGKPNLVEMVWELMVQGKXXXXXXXXXXXKGGFDEDEVER 610
           V+ FG+L+ E+L+ G  P     P  +      + QG+           +  +  D + +
Sbjct: 211 VWSFGVLLWELLTRGAPPYRHIDPFDLT---HFLAQGRRLP--------QPEYCPDSLYQ 259
Query: 611 VLHLGLLCAYPDPRARPTMRQVVKVLEGKIEA 642
           V+     C   DP  RPT R +V  +E  + A
Sbjct: 260 VMQQ---CWEADPAVRPTFRVLVGEVEQIVSA 288

>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human Cyclin A3 Complex With Atp Length = 301

Iteration: 1
 Score = 63.2 bits (152), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 56/183 (30%), Positives = 89/183 (48%), Gaps = 14/183 (7%)
Query: 389 GAEIAVK--RISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMEN 446
           G  +A+K  R+  E +G     + EIS L  L H ++V L      E   L LV++++  
Sbjct: 31  GEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTE-NKLYLVFEFL-- 87
Query: 447 GSLDKWIFQCDGSMMLSCEERI--RVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKE 504
            S+D   F  D S +      +    L  +  G+ + H     +VLHRD+K  N+L++ E
Sbjct: 88  -SMDLKKFM-DASALTGIPLPLIKSYLFQLLQGLAFCHS---HRVLHRDLKPENLLINTE 142
Query: 505 MNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGR-ASTQTDVFGFGILILEVL 563
              +L DFGLAR  G   V +    V T+ Y APE+    +  ST  D++  G +  E++
Sbjct: 143 GAIKLADFGLARAFG-VPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV 201
Query: 564 SGR 566
           + R
Sbjct: 202 TRR 204

>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C Beta Ii Complexed With A Bisindolylmaleimide Inhibitor Length = 353

Iteration: 1
 Score = 63.2 bits (152), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 35/111 (31%), Positives = 63/111 (56%), Gaps = 5/111 (4%)
Query: 473 DVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRVVGT 532
           ++A G+ +L     K +++RD+K  NV+LD E + ++ DFG+ + +    V +T    GT
Sbjct: 129 EIAIGLFFLQS---KGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGV-TTKXFCGT 184
Query: 533 VGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIE-EGKPNLVEMVWE 582
             Y+APE+ +        D + FG+L+ E+L+G+ P E E +  L + + E
Sbjct: 185 PDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIME 235

>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human Tgf- Beta Type I Receptor Length = 303

Iteration: 1
 Score = 63.2 bits (152), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 57/195 (29%), Positives = 93/195 (47%), Gaps = 30/195 (15%)
Query: 389 GAEIAVKRISHENDGGTRAFL--AEISSLGRLKHKSLVGLRGWCKREKGS---LMLVYDY 443
           G E+AVK  S   +   R++   AEI     L+H++++G      ++ G+   L LV DY
Sbjct: 26  GEEVAVKIFSSREE---RSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDY 82
Query: 444 MENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLH------EGWEKKVLHRDIKSS 497
            E+GSL    F       ++ E  I++    A+G+ +LH      +G +  + HRD+KS 
Sbjct: 83  HEHGSL----FDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQG-KPAIAHRDLKSK 137
Query: 498 NVLLDKEMNGRLGDFGLARMHGHG----QVASTTRVVGTVGYLAPEVFSSG------RAS 547
           N+L+ K     + D GLA  H        +A   R VGT  Y+APEV           + 
Sbjct: 138 NILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHR-VGTKRYMAPEVLDDSINMKHFESF 196
Query: 548 TQTDVFGFGILILEV 562
            + D++  G++  E+
Sbjct: 197 KRADIYAMGLVFWEI 211

>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542 Length = 309

Iteration: 1
 Score = 62.8 bits (151), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 57/195 (29%), Positives = 93/195 (47%), Gaps = 30/195 (15%)
Query: 389 GAEIAVKRISHENDGGTRAFL--AEISSLGRLKHKSLVGLRGWCKREKGS---LMLVYDY 443
           G E+AVK  S   +   R++   AEI     L+H++++G      ++ G+   L LV DY
Sbjct: 32  GEEVAVKIFSSREE---RSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDY 88
Query: 444 MENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLH------EGWEKKVLHRDIKSS 497
            E+GSL    F       ++ E  I++    A+G+ +LH      +G +  + HRD+KS 
Sbjct: 89  HEHGSL----FDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQG-KPAIAHRDLKSK 143
Query: 498 NVLLDKEMNGRLGDFGLARMHGHG----QVASTTRVVGTVGYLAPEVFSSG------RAS 547
           N+L+ K     + D GLA  H        +A   R VGT  Y+APEV           + 
Sbjct: 144 NILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHR-VGTKRYMAPEVLDDSINMKHFESF 202
Query: 548 TQTDVFGFGILILEV 562
            + D++  G++  E+
Sbjct: 203 KRADIYAMGLVFWEI 217

>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3- Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine Length = 306

Iteration: 1
 Score = 62.8 bits (151), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 57/195 (29%), Positives = 93/195 (47%), Gaps = 30/195 (15%)
Query: 389 GAEIAVKRISHENDGGTRAFL--AEISSLGRLKHKSLVGLRGWCKREKGS---LMLVYDY 443
           G E+AVK  S   +   R++   AEI     L+H++++G      ++ G+   L LV DY
Sbjct: 29  GEEVAVKIFSSREE---RSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDY 85
Query: 444 MENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLH------EGWEKKVLHRDIKSS 497
            E+GSL    F       ++ E  I++    A+G+ +LH      +G +  + HRD+KS 
Sbjct: 86  HEHGSL----FDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQG-KPAIAHRDLKSK 140
Query: 498 NVLLDKEMNGRLGDFGLARMHGHG----QVASTTRVVGTVGYLAPEVFSSG------RAS 547
           N+L+ K     + D GLA  H        +A   R VGT  Y+APEV           + 
Sbjct: 141 NILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHR-VGTKRYMAPEVLDDSINMKHFESF 199
Query: 548 TQTDVFGFGILILEV 562
            + D++  G++  E+
Sbjct: 200 KRADIYAMGLVFWEI 214

>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By Mutational Studies Length = 298

Iteration: 1
 Score = 62.8 bits (151), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 45/169 (26%), Positives = 84/169 (49%), Gaps = 16/169 (9%)
Query: 407 AFLAEISSLGRLK-HKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCE 465
           A L E+  L ++  H +++ L+           LV+D M+ G L  ++ +    + LS +
Sbjct: 69  ATLKEVDILRKVSGHPNIIQLKD-TYETNTFFFLVFDLMKKGELFDYLTE---KVTLSEK 124
Query: 466 ERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVAS 525
           E  ++++ +   +  LH+     ++HRD+K  N+LLD +MN +L DFG +     G+   
Sbjct: 125 ETRKIMRALLEVICALHK---LNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLR 181
Query: 526 TTRVVGTVGYLAPEVFSSGRAST------QTDVFGFGILILEVLSGRRP 568
           +  V GT  YLAPE+              + D++  G+++  +L+G  P
Sbjct: 182 S--VCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPP 228

>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia Length = 329

Iteration: 1
 Score = 62.8 bits (151), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 53/180 (29%), Positives = 87/180 (48%), Gaps = 17/180 (9%)
Query: 392 IAVKRI--SHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSL 449
           +A+KRI   HE +G     + E+S L  L+H++++ L+         L L+++Y EN  L
Sbjct: 62  VAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKS-VIHHNHRLHLIFEYAEN-DL 119
Query: 450 DKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNG-- 507
            K++   D +  +S       L  +  GV + H    ++ LHRD+K  N+LL        
Sbjct: 120 KKYM---DKNPDVSMRVIKSFLYQLINGVNFCH---SRRCLHRDLKPQNLLLSVSDASET 173
Query: 508 ---RLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRA-STQTDVFGFGILILEVL 563
              ++GDFGLAR  G   +   T  + T+ Y  PE+    R  ST  D++    +  E+L
Sbjct: 174 PVLKIGDFGLARAFG-IPIRQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEML 232

>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human Cyclin A3 Complex With Atp Length = 302

Iteration: 1
 Score = 62.8 bits (151), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 56/183 (30%), Positives = 89/183 (48%), Gaps = 14/183 (7%)
Query: 389 GAEIAVK--RISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMEN 446
           G  +A+K  R+  E +G     + EIS L  L H ++V L      E   L LV++++  
Sbjct: 31  GEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTE-NKLYLVFEFL-- 87
Query: 447 GSLDKWIFQCDGSMMLSCEERI--RVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKE 504
            S+D   F  D S +      +    L  +  G+ + H     +VLHRD+K  N+L++ E
Sbjct: 88  -SMDLKDFM-DASALTGIPLPLIKSYLFQLLQGLAFCHS---HRVLHRDLKPQNLLINTE 142
Query: 505 MNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGR-ASTQTDVFGFGILILEVL 563
              +L DFGLAR  G   V +    V T+ Y APE+    +  ST  D++  G +  E++
Sbjct: 143 GAIKLADFGLARAFG-VPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV 201
Query: 564 SGR 566
           + R
Sbjct: 202 TRR 204

>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680 Length = 292

Iteration: 1
 Score = 62.8 bits (151), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 46/176 (26%), Positives = 80/176 (45%), Gaps = 10/176 (5%)
Query: 400 ENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGS 459
           E +G       EI     L H +++ L  +   ++  + L+ +Y   G L K   +   S
Sbjct: 62  EKEGVEHQLRREIEIQAHLHHPNILRLYNYFY-DRRRIYLILEYAPRGELYK---ELQKS 117
Query: 460 MMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHG 519
                +    +++++A  ++Y H    KKV+HRDIK  N+LL  +   ++ DFG +    
Sbjct: 118 CTFDEQRTATIMEELADALMYCHG---KKVIHRDIKPENLLLGLKGELKIADFGWS---V 171
Query: 520 HGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPN 575
           H        + GT+ YL PE+      + + D++  G+L  E+L G  P E    N
Sbjct: 172 HAPSLRRKTMCGTLDYLPPEMIEGRMHNEKVDLWCIGVLCYELLVGNPPFESASHN 227

>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7 Length = 310

Iteration: 1
 Score = 62.8 bits (151), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 60/251 (23%), Positives = 107/251 (42%), Gaps = 20/251 (7%)
Query: 389 GAEIAVKRISHEN--DGGTRA-FLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYME 445
           G  +A+K++   +  D   RA  + EI  L +L H +++        E   L +V +  +
Sbjct: 57  GVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFI-EDNELNIVLELAD 115
Query: 446 NGSLDKWIFQCDGSMMLSCEERI-RVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKE 504
            G L + I        L  E  + +    + + + ++H    ++V+HRDIK +NV +   
Sbjct: 116 AGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHS---RRVMHRDIKPANVFITAT 172
Query: 505 MNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLS 564
              +LGD GL R       A+ + +VGT  Y++PE       + ++D++  G L+ E+ +
Sbjct: 173 GVVKLGDLGLGRFFSSKTTAAHS-LVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAA 231
Query: 565 GRRPIEEGKPNLVEMVWELMVQGKXXXXXXXXXXXKGGFDEDEVERVLHLGLLCAYPDPR 624
            + P    K NL  +        K              + E+    +  L  +C  PDP 
Sbjct: 232 LQSPFYGDKMNLYSLC-------KKIEQCDYPPLPSDHYSEE----LRQLVNMCINPDPE 280
Query: 625 ARPTMRQVVKV 635
            RP +  V  V
Sbjct: 281 KRPDVTYVYDV 291

>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300

Iteration: 1
 Score = 62.8 bits (151), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 56/183 (30%), Positives = 89/183 (48%), Gaps = 14/183 (7%)
Query: 389 GAEIAVK--RISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMEN 446
           G  +A+K  R+  E +G     + EIS L  L H ++V L      E   L LV++++  
Sbjct: 29  GEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTE-NKLYLVFEFL-- 85
Query: 447 GSLDKWIFQCDGSMMLSCEERI--RVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKE 504
            S+D   F  D S +      +    L  +  G+ + H     +VLHRD+K  N+L++ E
Sbjct: 86  -SMDLKKFM-DASALTGIPLPLIKSYLFQLLQGLAFCHS---HRVLHRDLKPENLLINTE 140
Query: 505 MNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGR-ASTQTDVFGFGILILEVL 563
              +L DFGLAR  G   V +    V T+ Y APE+    +  ST  D++  G +  E++
Sbjct: 141 GAIKLADFGLARAFG-VPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV 199
Query: 564 SGR 566
           + R
Sbjct: 200 TRR 202

>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4 Inhibitor Length = 298

Iteration: 1
 Score = 62.8 bits (151), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 56/183 (30%), Positives = 88/183 (48%), Gaps = 14/183 (7%)
Query: 389 GAEIAVK--RISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMEN 446
           G  +A+K  R+  E +G     + EIS L  L H ++V L      E   L LV++++  
Sbjct: 27  GEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTE-NKLYLVFEHVHQ 85
Query: 447 GSLDKWIFQCDGSMMLSCEERI--RVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKE 504
              D   F  D S +      +    L  +  G+ + H     +VLHRD+K  N+L++ E
Sbjct: 86  ---DLKTFM-DASALTGIPLPLIKSYLFQLLQGLAFCHS---HRVLHRDLKPQNLLINTE 138
Query: 505 MNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGR-ASTQTDVFGFGILILEVL 563
              +L DFGLAR  G   V + T  V T+ Y APE+    +  ST  D++  G +  E++
Sbjct: 139 GAIKLADFGLARAFG-VPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV 197
Query: 564 SGR 566
           + R
Sbjct: 198 TRR 200

>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase 32a (Yank1) Length = 384

Iteration: 1
 Score = 62.8 bits (151), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 47/167 (28%), Positives = 82/167 (49%), Gaps = 12/167 (7%)
Query: 405 TRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSC 464
            R    E+  +  L+H  LV L  +  +++  + +V D +  G L ++  Q +       
Sbjct: 59  VRNVFKELQIMQGLEHPFLVNL-WYSFQDEEDMFMVVDLLLGGDL-RYHLQQNVHFK--- 113
Query: 465 EERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVA 524
           EE +++   +   V+ L     ++++HRD+K  N+LLD+  +  + DF +A M       
Sbjct: 114 EETVKLF--ICELVMALDYLQNQRIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRE--T 169
Query: 525 STTRVVGTVGYLAPEVFSSGRA---STQTDVFGFGILILEVLSGRRP 568
             T + GT  Y+APE+FSS +    S   D +  G+   E+L GRRP
Sbjct: 170 QITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRP 216

>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human Cyclin A3 Complex With The Inhibitor Nu6102 Length = 300

Iteration: 1
 Score = 62.8 bits (151), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 56/183 (30%), Positives = 89/183 (48%), Gaps = 14/183 (7%)
Query: 389 GAEIAVK--RISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMEN 446
           G  +A+K  R+  E +G     + EIS L  L H ++V L      E   L LV++++  
Sbjct: 30  GEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTE-NKLYLVFEFL-- 86
Query: 447 GSLDKWIFQCDGSMMLSCEERI--RVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKE 504
            S+D   F  D S +      +    L  +  G+ + H     +VLHRD+K  N+L++ E
Sbjct: 87  -SMDLKDFM-DASALTGIPLPLIKSYLFQLLQGLAFCHS---HRVLHRDLKPQNLLINTE 141
Query: 505 MNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGR-ASTQTDVFGFGILILEVL 563
              +L DFGLAR  G   V +    V T+ Y APE+    +  ST  D++  G +  E++
Sbjct: 142 GAIKLADFGLARAFG-VPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV 200
Query: 564 SGR 566
           + R
Sbjct: 201 TRR 203

>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10 Bound To Novel Bosutinib Isoform 1, Previously Thought To Be Bosutinib Length = 293

Iteration: 1
 Score = 62.8 bits (151), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 49/192 (25%), Positives = 90/192 (46%), Gaps = 14/192 (7%)
Query: 389 GAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGS 448
           GA  A K I  +++     ++ EI  L    H  +V L G      G L ++ ++   G+
Sbjct: 36  GALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLG-AYYHDGKLWIMIEFCPGGA 94
Query: 449 LDKWIFQCDGSMMLSCEERIRVL-KDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNG 507
           +D  + + D  +    E +I+V+ + +   + +LH    K+++HRD+K+ NVL+  E + 
Sbjct: 95  VDAIMLELDRGL---TEPQIQVVCRQMLEALNFLHS---KRIIHRDLKAGNVLMTLEGDI 148
Query: 508 RLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRAST-----QTDVFGFGILILEV 562
           RL DFG++       +      +GT  ++APEV             + D++  GI ++E+
Sbjct: 149 RLADFGVS-AKNLKTLQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEM 207
Query: 563 LSGRRPIEEGKP 574
                P  E  P
Sbjct: 208 AQIEPPHHELNP 219

>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v- H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor Length = 302

Iteration: 1
 Score = 62.8 bits (151), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 55/183 (30%), Positives = 90/183 (49%), Gaps = 14/183 (7%)
Query: 389 GAEIAVK--RISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMEN 446
           G  +A+K  R+  E +G     + EIS L  L H ++V L      E   L LV+++++ 
Sbjct: 31  GEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTE-NKLYLVFEHVDQ 89
Query: 447 GSLDKWIFQCDGSMMLSCEERI--RVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKE 504
             L K++   D S +      +    L  +  G+ + H     +VLHRD+K  N+L++ E
Sbjct: 90  -DLKKFM---DASALTGIPLPLIKSYLFQLLQGLAFCHS---HRVLHRDLKPQNLLINTE 142
Query: 505 MNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGR-ASTQTDVFGFGILILEVL 563
              +L DFGLAR  G   V +    V T+ Y APE+    +  ST  D++  G +  E++
Sbjct: 143 GAIKLADFGLARAFG-VPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV 201
Query: 564 SGR 566
           + R
Sbjct: 202 TRR 204

>pdb|1RJB|A Chain A, Crystal Structure Of Flt3 Length = 344

Iteration: 1
 Score = 62.8 bits (151), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 54/200 (27%), Positives = 96/200 (48%), Gaps = 25/200 (12%)
Query: 387 GGGAEIAVKRISHENDGGTR-AFLAEISSLGRL-KHKSLVGLRGWCKREKGSLMLVYDYM 444
           G   ++AVK +  + D   R A ++E+  + +L  H+++V L G C    G + L+++Y 
Sbjct: 73  GVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTL-SGPIYLIFEYC 131
Query: 445 ENGSLDKWI-----------FQCDGSMMLSCEERIRVL--KDVAAGVLYLHEGWE----K 487
             G L  ++            + +    L  EE + VL  +D+      + +G E    K
Sbjct: 132 CYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFK 191
Query: 488 KVLHRDIKSSNVLLDKEMNGRLGDFGLAR---MHGHGQVASTTRVVGTVGYLAPEVFSSG 544
             +HRD+ + NVL+      ++ DFGLAR      +  V    R+   V ++APE    G
Sbjct: 192 SCVHRDLAARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARL--PVKWMAPESLFEG 249
Query: 545 RASTQTDVFGFGILILEVLS 564
             + ++DV+ +GIL+ E+ S
Sbjct: 250 IYTIKSDVWSYGILLWEIFS 269

>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2- Aminopyridine Inhibitor Length = 301

Iteration: 1
 Score = 62.8 bits (151), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 73/277 (26%), Positives = 121/277 (43%), Gaps = 39/277 (14%)
Query: 389 GAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRG---WCKREKGSLMLVYDYME 445
           G  +AVK I    D  +     E+ +   L+H++++G        +     L L+  Y E
Sbjct: 31  GENVAVK-IFSSRDEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLWLITHYHE 89
Query: 446 NGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLH------EGWEKKVLHRDIKSSNV 499
            GSL  ++ Q      +SC   +R++  +A+G+ +LH      +G +  + HRD+KS N+
Sbjct: 90  MGSLYDYL-QLTTLDTVSC---LRIVLSIASGLAHLHIEIFGTQG-KPAIAHRDLKSKNI 144
Query: 500 LLDKEMNGRLGDFGLARMHGHG----QVASTTRVVGTVGYLAPEVFSSG------RASTQ 549
           L+ K     + D GLA MH        V +  R VGT  Y+APEV           +  +
Sbjct: 145 LVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPR-VGTKRYMAPEVLDETIQVDCFDSYKR 203
Query: 550 TDVFGFGILILEVLSGRRPIEEG-----KPNLVEMV-----WELMVQGKXXXXXXXXXXX 599
            D++ FG+++ EV   RR +  G     KP   ++V     +E M +             
Sbjct: 204 VDIWAFGLVLWEV--ARRMVSNGIVEDYKPPFYDVVPNDPSFEDM-RKVVCVDQQRPNIP 260
Query: 600 KGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVL 636
              F +  +  +  L   C Y +P AR T  ++ K L
Sbjct: 261 NRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTL 297

>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein Kinase C Beta Ii Length = 674

Iteration: 1
 Score = 62.8 bits (151), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 35/111 (31%), Positives = 63/111 (56%), Gaps = 5/111 (4%)
Query: 473 DVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRVVGT 532
           ++A G+ +L     K +++RD+K  NV+LD E + ++ DFG+ + +    V +T    GT
Sbjct: 450 EIAIGLFFLQS---KGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGV-TTKXFCGT 505
Query: 533 VGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIE-EGKPNLVEMVWE 582
             Y+APE+ +        D + FG+L+ E+L+G+ P E E +  L + + E
Sbjct: 506 PDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIME 556

>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin Length = 330

Iteration: 1
 Score = 62.8 bits (151), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 73/277 (26%), Positives = 122/277 (44%), Gaps = 39/277 (14%)
Query: 389 GAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRG---WCKREKGSLMLVYDYME 445
           G  +AVK I    D  +     E+ +   L+H++++G        +     L L+  Y E
Sbjct: 60  GENVAVK-IFSSRDEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLWLITHYHE 118
Query: 446 NGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLH------EGWEKKVLHRDIKSSNV 499
            GSL  ++ Q      +SC   +R++  +A+G+ +LH      +G +  + HRD+KS N+
Sbjct: 119 MGSLYDYL-QLTTLDTVSC---LRIVLSIASGLAHLHIEIFGTQG-KPAIAHRDLKSKNI 173
Query: 500 LLDKEMNGRLGDFGLARMHGHG----QVASTTRVVGTVGYLAPEVFSSG------RASTQ 549
           L+ K     + D GLA MH        V +  R VGT  Y+APEV           +  +
Sbjct: 174 LVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPR-VGTKRYMAPEVLDETIQVDCFDSYKR 232
Query: 550 TDVFGFGILILEVLSGRRPIEEG-----KPNLVEMV-----WELMVQGKXXXXXXXXXXX 599
            D++ FG+++ EV   RR +  G     KP   ++V     +E M +             
Sbjct: 233 VDIWAFGLVLWEV--ARRMVSNGIVEDYKPPFYDVVPNDPSFEDMRKVVCVDQQRPNIPN 290
Query: 600 KGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVL 636
           +  F +  +  +  L   C Y +P AR T  ++ K L
Sbjct: 291 R-WFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTL 326

>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain Length = 331

Iteration: 1
 Score = 62.4 bits (150), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 55/203 (27%), Positives = 98/203 (48%), Gaps = 14/203 (6%)
Query: 389 GAEIAVKRISHENDGGT--RAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMEN 446
           G  +A+K+    +D     +  + EI  L +L+H++LV L   CK++K    LV++++++
Sbjct: 50  GRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKK-RWYLVFEFVDH 108
Query: 447 GSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMN 506
             LD      +G   L  +   + L  +  G+ + H      ++HRDIK  N+L+ +   
Sbjct: 109 TILDDLELFPNG---LDYQVVQKYLFQIINGIGFCHS---HNIIHRDIKPENILVSQSGV 162
Query: 507 GRLGDFGLAR-MHGHGQVASTTRVVGTVGYLAPEVFSSG-RASTQTDVFGFGILILEVLS 564
            +L DFG AR +   G+V      V T  Y APE+     +     DV+  G L+ E+  
Sbjct: 163 VKLCDFGFARTLAAPGEVYDDE--VATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFM 220
Query: 565 GRRPIEEGKPNLVEMVWELMVQG 587
           G  P+  G  ++ ++   +M  G
Sbjct: 221 G-EPLFPGDSDIDQLYHIMMCLG 242

>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase Catalytic Domain Length = 367

Iteration: 1
 Score = 62.4 bits (150), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 51/185 (27%), Positives = 87/185 (47%), Gaps = 17/185 (9%)
Query: 391 EIAVK---RISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENG 447
           ++AVK    +  E D     FL E   + +  H+++V   G   +     +L+ + M  G
Sbjct: 103 QVAVKTLPEVCSEQD--ELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILL-ELMAGG 159
Query: 448 SLDKWIFQC----DGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDK 503
            L  ++ +          L+  + + V +D+A G  YL E      +HRDI + N LL  
Sbjct: 160 DLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEE---NHFIHRDIAARNCLLTC 216
Query: 504 EMNGR---LGDFGLAR-MHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILI 559
              GR   +GDFG+AR ++  G        +  V ++ PE F  G  +++TD + FG+L+
Sbjct: 217 PGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLL 276
Query: 560 LEVLS 564
            E+ S
Sbjct: 277 WEIFS 281

>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A Pyrimidinopyridone Inhibitor Length = 333

Iteration: 1
 Score = 62.4 bits (150), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 65/274 (23%), Positives = 121/274 (44%), Gaps = 38/274 (13%)
Query: 386 EGGGAEIAVKRI-SHENDGGTRAFLAEISSLGRL-KHKSLVGLRGWCKREKGSLMLVYDY 443
           E    ++AVK + S  +     A ++E+  +  L +H+++V L G C    G ++++ +Y
Sbjct: 73  EDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACT-HGGPVLVITEY 131
Query: 444 MENGSLDKW------IFQCDGSM-----MLSCEERIRVLKDVAAGVLYLHEGWEKKVLHR 492
              G L  +      + + D +       LS  + +     VA G+ +L     K  +HR
Sbjct: 132 CCYGDLLNFLRRKSRVLETDPAFAIANSTLSTRDLLHFSSQVAQGMAFLAS---KNCIHR 188
Query: 493 DIKSSNVLLDKEMNGRLGDFGLAR--MHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQT 550
           D+ + NVLL      ++GDFGLAR  M+    +      +  V ++APE       + Q+
Sbjct: 189 DVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARL-PVKWMAPESIFDCVYTVQS 247
Query: 551 DVFGFGILILEVLS-GRRPIEEGKPNLV--EMVWELMVQGKXXXXXXXXXXXKGGFDEDE 607
           DV+ +GIL+ E+ S G  P     P ++     ++L+  G            +  F    
Sbjct: 248 DVWSYGILLWEIFSLGLNPY----PGILVNSKFYKLVKDG--------YQMAQPAFAPKN 295
Query: 608 VERVLHLGLLCAYPDPRARPTMRQVVKVLEGKIE 641
           +  ++     C   +P  RPT +Q+   L+ + +
Sbjct: 296 IYSIMQ---ACWALEPTHRPTFQQICSFLQEQAQ 326

>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10 Bound To Su11274 Length = 302

Iteration: 1
 Score = 62.4 bits (150), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 49/192 (25%), Positives = 90/192 (46%), Gaps = 14/192 (7%)
Query: 389 GAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGS 448
           GA  A K I  +++     ++ EI  L    H  +V L G      G L ++ ++   G+
Sbjct: 44  GALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLG-AYYHDGKLWIMIEFCPGGA 102
Query: 449 LDKWIFQCDGSMMLSCEERIRVL-KDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNG 507
           +D  + + D  +    E +I+V+ + +   + +LH    K+++HRD+K+ NVL+  E + 
Sbjct: 103 VDAIMLELDRGL---TEPQIQVVCRQMLEALNFLHS---KRIIHRDLKAGNVLMTLEGDI 156
Query: 508 RLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRAST-----QTDVFGFGILILEV 562
           RL DFG++       +      +GT  ++APEV             + D++  GI ++E+
Sbjct: 157 RLADFGVS-AKNLKTLQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEM 215
Query: 563 LSGRRPIEEGKP 574
                P  E  P
Sbjct: 216 AQIEPPHHELNP 227

>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 299

Iteration: 1
 Score = 62.4 bits (150), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 54/183 (29%), Positives = 86/183 (46%), Gaps = 14/183 (7%)
Query: 389 GAEIAVK--RISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMEN 446
           G  +A+K  R+  E +G     + EIS L  L H ++V L      E   L LV++++  
Sbjct: 28  GEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTE-NKLYLVFEFLHQ 86
Query: 447 GSLDKWIFQCDGSMMLSCEERI--RVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKE 504
              D      D S +      +    L  +  G+ + H     +VLHRD+K  N+L++ E
Sbjct: 87  DLKD----FMDASALTGIPLPLIKSYLFQLLQGLAFCHS---HRVLHRDLKPENLLINTE 139
Query: 505 MNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGR-ASTQTDVFGFGILILEVL 563
              +L DFGLAR  G   V +    V T+ Y APE+    +  ST  D++  G +  E++
Sbjct: 140 GAIKLADFGLARAFG-VPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV 198
Query: 564 SGR 566
           + R
Sbjct: 199 TRR 201

>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A 3,4,5-Trimethoxy Aniline Containing Pyrimidine Length = 309

Iteration: 1
 Score = 62.0 bits (149), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 50/188 (26%), Positives = 92/188 (48%), Gaps = 21/188 (11%)
Query: 392 IAVKRISHENDGGT----RAFLAEISSLGRLKHK-SLVGLRGWCKREKGSLMLVYDYMEN 446
           +AVK +    +G T    RA ++E+  L  + H  ++V L G C +  G LM++ ++ + 
Sbjct: 60  VAVKML---KEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKF 116
Query: 447 GSLDKWIFQCDGSMM---------LSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSS 497
           G+L  ++       +         L+ E  I     VA G+ +L     +K +HRD+ + 
Sbjct: 117 GNLSTYLRSKRNEFVPYKDLYKDFLTLEHLICYSFQVAKGMEFLAS---RKXIHRDLAAR 173
Query: 498 NVLLDKEMNGRLGDFGLAR-MHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFG 556
           N+LL ++   ++ DFGLAR ++              + ++APE       + Q+DV+ FG
Sbjct: 174 NILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFG 233
Query: 557 ILILEVLS 564
           +L+ E+ S
Sbjct: 234 VLLWEIFS 241

>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A Pyrrolo-Pyridine Inhibitor Length = 273

Iteration: 1
 Score = 62.0 bits (149), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 47/163 (28%), Positives = 79/163 (48%), Gaps = 9/163 (5%)
Query: 411 EISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRV 470
           EI     L H+++V   G  +RE     L  +Y   G L     + +  + +   +  R 
Sbjct: 55  EICINAMLNHENVVKFYGH-RREGNIQYLFLEYCSGGEL---FDRIEPDIGMPEPDAQRF 110
Query: 471 LKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVAS-TTRV 529
              + AGV+YLH      + HRDIK  N+LLD+  N ++ DFGLA +  +        ++
Sbjct: 111 FHQLMAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKM 167
Query: 530 VGTVGYLAPEVFSSGRASTQ-TDVFGFGILILEVLSGRRPIEE 571
            GT+ Y+APE+        +  DV+  GI++  +L+G  P ++
Sbjct: 168 CGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 210

>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase Catalytic Domain Length = 344

Iteration: 1
 Score = 62.0 bits (149), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 51/185 (27%), Positives = 87/185 (47%), Gaps = 17/185 (9%)
Query: 391 EIAVK---RISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENG 447
           ++AVK    +  E D     FL E   + +  H+++V   G   +     +L+ + M  G
Sbjct: 80  QVAVKTLPEVCSEQD--ELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILL-ELMAGG 136
Query: 448 SLDKWIFQC----DGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDK 503
            L  ++ +          L+  + + V +D+A G  YL E      +HRDI + N LL  
Sbjct: 137 DLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEE---NHFIHRDIAARNCLLTC 193
Query: 504 EMNGR---LGDFGLAR-MHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILI 559
              GR   +GDFG+AR ++  G        +  V ++ PE F  G  +++TD + FG+L+
Sbjct: 194 PGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLL 253
Query: 560 LEVLS 564
            E+ S
Sbjct: 254 WEIFS 258

>pdb|1UZY|A Chain A, Erythrina Crystagalli Lectin Length = 242

Iteration: 1
 Score = 62.0 bits (149), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 71/262 (27%), Positives = 106/262 (40%), Gaps = 45/262 (17%)
Query: 26  VDFVFNGFNSSN--LSLYGTATV-ESRILTLTN------STTFTIGRALYPSKIPTKRPN 76
           + F F+ F   N  L+L G A + +S +L LT           + GR LY   +      
Sbjct: 4   ISFSFSEFEPGNNDLTLQGAAIITQSGVLQLTKINQNGMPAWDSTGRTLYTKPVHIWDMT 63
Query: 77  SSYVYPFSTSFIFAM-APYKGVLAGHGLVFLFVPFHGIKGATEAQHLGLFNRTNDGNSSN 135
           +  V  F T F F++  PY   L   GLVF   P    K A    +LG+FN +   NS  
Sbjct: 64  TGTVASFETRFSFSIEQPYTRPLPADGLVFFMGPTKS-KPAQGYGYLGVFNNSKQDNSY- 121
Query: 136 HVFGVEFDVFKNQEFNDIDENHVGIDVNSLTSVSAHAAGYWPDNQXXXXXXXXXXXXXXX 195
               VEFD F N  ++     H+GIDVNS+ S+                           
Sbjct: 122 QTLAVEFDTFSN-PWDPPQVPHIGIDVNSIRSIKT------------------------- 155
Query: 196 EKSFKELKLNNGKNYQVWIDYADSFINITMVEAGMKRPKRPLLSVPLNLSGVLEDEMYVG 255
               +  +L+NG+   V I Y  S   +  V           ++  +++  VL + + VG
Sbjct: 156 ----QPFQLDNGQVANVVIKYDASSKILLAVLVYPSSGAIYTIAEIVDVKQVLPEWVDVG 211
Query: 256 FTAATG---QLVESHKILAWSF 274
            + ATG      E+H + +WSF
Sbjct: 212 LSGATGAQRDAAETHDVYSWSF 233

>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed With A Bisanilinopyrimidine Inhibitor Length = 302

Iteration: 1
 Score = 61.6 bits (148), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 55/183 (30%), Positives = 87/183 (47%), Gaps = 14/183 (7%)
Query: 389 GAEIAVK--RISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMEN 446
           G  +A+K  R+  E +G     + EIS L  L H ++V L      E   L LV++++  
Sbjct: 31  GEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTE-NKLYLVFEFLHQ 89
Query: 447 GSLDKWIFQCDGSMMLSCEERI--RVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKE 504
              D   F  D S +      +    L  +  G+ + H     +VLHRD+K  N+L++ E
Sbjct: 90  ---DLKTFM-DASALTGIPLPLIKSYLFQLLQGLAFCHS---HRVLHRDLKPQNLLINTE 142
Query: 505 MNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGR-ASTQTDVFGFGILILEVL 563
              +L DFGLAR  G   V +    V T+ Y APE+    +  ST  D++  G +  E++
Sbjct: 143 GAIKLADFGLARAFG-VPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV 201
Query: 564 SGR 566
           + R
Sbjct: 202 TRR 204

>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase Length = 342

Iteration: 1
 Score = 61.6 bits (148), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 51/185 (27%), Positives = 87/185 (47%), Gaps = 17/185 (9%)
Query: 391 EIAVK---RISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENG 447
           ++AVK    +  E D     FL E   + +L H+++V   G   +     +L+ + M  G
Sbjct: 77  QVAVKTLPEVCSEQD--ELDFLMEALIISKLNHQNIVRCIGVSLQSLPRFILL-ELMAGG 133
Query: 448 SLDKWIFQC----DGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDK 503
            L  ++ +          L+  + + V +D+A G  YL E      +HRDI + N LL  
Sbjct: 134 DLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEE---NHFIHRDIAARNCLLTC 190
Query: 504 EMNGR---LGDFGLAR-MHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILI 559
              GR   +GDFG+AR ++           +  V ++ PE F  G  +++TD + FG+L+
Sbjct: 191 PGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLL 250
Query: 560 LEVLS 564
            E+ S
Sbjct: 251 WEIFS 255

>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017 Length = 268

Iteration: 1
 Score = 61.6 bits (148), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 47/163 (28%), Positives = 79/163 (48%), Gaps = 9/163 (5%)
Query: 411 EISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRV 470
           EI     L H+++V   G  +RE     L  +Y   G L     + +  + +   +  R 
Sbjct: 54  EICINKMLNHENVVKFYGH-RREGNIQYLFLEYCSGGEL---FDRIEPDIGMPEPDAQRF 109
Query: 471 LKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVAS-TTRV 529
              + AGV+YLH      + HRDIK  N+LLD+  N ++ DFGLA +  +        ++
Sbjct: 110 FHQLMAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKM 166
Query: 530 VGTVGYLAPEVFSSGRASTQ-TDVFGFGILILEVLSGRRPIEE 571
            GT+ Y+APE+        +  DV+  GI++  +L+G  P ++
Sbjct: 167 CGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 209

>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor Length = 269

Iteration: 1
 Score = 61.6 bits (148), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 47/163 (28%), Positives = 79/163 (48%), Gaps = 9/163 (5%)
Query: 411 EISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRV 470
           EI     L H+++V   G  +RE     L  +Y   G L     + +  + +   +  R 
Sbjct: 55  EICINKMLNHENVVKFYGH-RREGNIQYLFLEYCSGGEL---FDRIEPDIGMPEPDAQRF 110
Query: 471 LKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVAS-TTRV 529
              + AGV+YLH      + HRDIK  N+LLD+  N ++ DFGLA +  +        ++
Sbjct: 111 FHQLMAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKM 167
Query: 530 VGTVGYLAPEVFSSGRASTQ-TDVFGFGILILEVLSGRRPIEE 571
            GT+ Y+APE+        +  DV+  GI++  +L+G  P ++
Sbjct: 168 CGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 210

>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure Length = 309

Iteration: 1
 Score = 61.6 bits (148), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 53/192 (27%), Positives = 92/192 (47%), Gaps = 37/192 (19%)
Query: 392 IAVKRISH---ENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGS 448
           +A+K++S+   +++   +  + E+  L +L+H + +  RG C   + +  LV +Y     
Sbjct: 43  VAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRG-CYLREHTAWLVMEY----- 96
Query: 449 LDKWIFQCDGSMMLSCEERIRVLKDVA---------AGVLYLHEGWEKKVLHRDIKSSNV 499
                  C GS     E   + L++V           G+ YLH      ++HRD+K+ N+
Sbjct: 97  -------CLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHS---HNMIHRDVKAGNI 146
Query: 500 LLDKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEV---FSSGRASTQTDVFGFG 556
           LL +    +LGDFG A +     +A     VGT  ++APEV      G+   + DV+  G
Sbjct: 147 LLSEPGLVKLGDFGSASI-----MAPANXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLG 201
Query: 557 ILILEVLSGRRP 568
           I  +E L+ R+P
Sbjct: 202 ITCIE-LAERKP 212

>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1 Length = 278

Iteration: 1
 Score = 61.6 bits (148), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 47/163 (28%), Positives = 79/163 (48%), Gaps = 9/163 (5%)
Query: 411 EISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRV 470
           EI     L H+++V   G  +RE     L  +Y   G L     + +  + +   +  R 
Sbjct: 53  EICINKMLNHENVVKFYGH-RREGNIQYLFLEYCSGGEL---FDRIEPDIGMPEPDAQRF 108
Query: 471 LKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVAS-TTRV 529
              + AGV+YLH      + HRDIK  N+LLD+  N ++ DFGLA +  +        ++
Sbjct: 109 FHQLMAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKM 165
Query: 530 VGTVGYLAPEVFSSGRASTQ-TDVFGFGILILEVLSGRRPIEE 571
            GT+ Y+APE+        +  DV+  GI++  +L+G  P ++
Sbjct: 166 CGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 208

>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54 Length = 323

Iteration: 1
 Score = 61.6 bits (148), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 47/163 (28%), Positives = 79/163 (48%), Gaps = 9/163 (5%)
Query: 411 EISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRV 470
           EI     L H+++V   G  +RE     L  +Y   G L     + +  + +   +  R 
Sbjct: 55  EICINKMLNHENVVKFYG-HRREGNIQYLFLEYCSGGEL---FDRIEPDIGMPEPDAQRF 110
Query: 471 LKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVAS-TTRV 529
              + AGV+YLH      + HRDIK  N+LLD+  N ++ DFGLA +  +        ++
Sbjct: 111 FHQLMAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKM 167
Query: 530 VGTVGYLAPEVFSSGRASTQ-TDVFGFGILILEVLSGRRPIEE 571
            GT+ Y+APE+        +  DV+  GI++  +L+G  P ++
Sbjct: 168 CGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 210

>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20 Length = 322

Iteration: 1
 Score = 61.6 bits (148), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 47/163 (28%), Positives = 79/163 (48%), Gaps = 9/163 (5%)
Query: 411 EISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRV 470
           EI     L H+++V   G  +RE     L  +Y   G L     + +  + +   +  R 
Sbjct: 54  EICINKMLNHENVVKFYG-HRREGNIQYLFLEYCSGGEL---FDRIEPDIGMPEPDAQRF 109
Query: 471 LKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVAS-TTRV 529
              + AGV+YLH      + HRDIK  N+LLD+  N ++ DFGLA +  +        ++
Sbjct: 110 FHQLMAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKM 166
Query: 530 VGTVGYLAPEVFSSGRASTQ-TDVFGFGILILEVLSGRRPIEE 571
            GT+ Y+APE+        +  DV+  GI++  +L+G  P ++
Sbjct: 167 CGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 209

>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994 Length = 269

Iteration: 1
 Score = 61.6 bits (148), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 47/163 (28%), Positives = 79/163 (48%), Gaps = 9/163 (5%)
Query: 411 EISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRV 470
           EI     L H+++V   G  +RE     L  +Y   G L     + +  + +   +  R 
Sbjct: 54  EICINKMLNHENVVKFYGH-RREGNIQYLFLEYCSGGEL---FDRIEPDIGMPEPDAQRF 109
Query: 471 LKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVAS-TTRV 529
              + AGV+YLH      + HRDIK  N+LLD+  N ++ DFGLA +  +        ++
Sbjct: 110 FHQLMAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKM 166
Query: 530 VGTVGYLAPEVFSSGRASTQ-TDVFGFGILILEVLSGRRPIEE 571
            GT+ Y+APE+        +  DV+  GI++  +L+G  P ++
Sbjct: 167 CGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 209

>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding Site Length = 271

Iteration: 1
 Score = 61.6 bits (148), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 47/163 (28%), Positives = 79/163 (48%), Gaps = 9/163 (5%)
Query: 411 EISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRV 470
           EI     L H+++V   G  +RE     L  +Y   G L     + +  + +   +  R 
Sbjct: 54  EICINKMLNHENVVKFYGH-RREGNIQYLFLEYCSGGEL---FDRIEPDIGMPEPDAQRF 109
Query: 471 LKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVAS-TTRV 529
              + AGV+YLH      + HRDIK  N+LLD+  N ++ DFGLA +  +        ++
Sbjct: 110 FHQLMAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKM 166
Query: 530 VGTVGYLAPEVFSSGRASTQ-TDVFGFGILILEVLSGRRPIEE 571
            GT+ Y+APE+        +  DV+  GI++  +L+G  P ++
Sbjct: 167 CGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 209

>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint Kinase Inhibitors - Hit To Lead Exploration Length = 276

Iteration: 1
 Score = 61.6 bits (148), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 47/163 (28%), Positives = 79/163 (48%), Gaps = 9/163 (5%)
Query: 411 EISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRV 470
           EI     L H+++V   G  +RE     L  +Y   G L     + +  + +   +  R 
Sbjct: 55  EICINKMLNHENVVKFYGH-RREGNIQYLFLEYCSGGEL---FDRIEPDIGMPEPDAQRF 110
Query: 471 LKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVAS-TTRV 529
              + AGV+YLH      + HRDIK  N+LLD+  N ++ DFGLA +  +        ++
Sbjct: 111 FHQLMAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKM 167
Query: 530 VGTVGYLAPEVFSSGRASTQ-TDVFGFGILILEVLSGRRPIEE 571
            GT+ Y+APE+        +  DV+  GI++  +L+G  P ++
Sbjct: 168 CGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 210

>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form) Length = 285

Iteration: 1
 Score = 61.6 bits (148), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 43/171 (25%), Positives = 76/171 (44%), Gaps = 10/171 (5%)
Query: 400 ENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGS 459
           E  G       E+     L+H +++ L G+   +   + L+ +Y   G + K + +    
Sbjct: 52  EKAGVEHQLRREVEIQSHLRHPNILRLYGYF-HDATRVYLILEYAPRGEVYKELQKLSK- 109
Query: 460 MMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHG 519
                +     + ++A  + Y H    K+V+HRDIK  N+LL      ++ DFG +    
Sbjct: 110 --FDEQRTATYITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWS---V 161
Query: 520 HGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIE 570
           H   +  T + GT+ YL PE+        + D++  G+L  E L G+ P E
Sbjct: 162 HAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 212

>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation And Specifity Of A Ste20p Map3k Length = 348

Iteration: 1
 Score = 61.6 bits (148), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 51/193 (26%), Positives = 91/193 (47%), Gaps = 36/193 (18%)
Query: 392 IAVKRISH---ENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGS 448
           +A+K++S+   +++   +  + E+  L +L+H + +  RG C   + +  LV +Y     
Sbjct: 82  VAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRG-CYLREHTAWLVMEY----- 135
Query: 449 LDKWIFQCDGSMMLSCEERIRVLKDVA---------AGVLYLHEGWEKKVLHRDIKSSNV 499
                  C GS     E   + L++V           G+ YLH      ++HRD+K+ N+
Sbjct: 136 -------CLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHS---HNMIHRDVKAGNI 185
Query: 500 LLDKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEV---FSSGRASTQTDVFGFG 556
           LL +    +LGDFG A +     +A     VGT  ++APEV      G+   + DV+  G
Sbjct: 186 LLSEPGLVKLGDFGSASI-----MAPANXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLG 240
Query: 557 ILILEVLSGRRPI 569
           I  +E+   + P+
Sbjct: 241 ITCIELAERKPPL 253

>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human Chk1 Kinase Domain Length = 273

Iteration: 1
 Score = 61.6 bits (148), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 47/163 (28%), Positives = 79/163 (48%), Gaps = 9/163 (5%)
Query: 411 EISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRV 470
           EI     L H+++V   G  +RE     L  +Y   G L     + +  + +   +  R 
Sbjct: 54  EICINKMLNHENVVKFYGH-RREGNIQYLFLEYCSGGEL---FDRIEPDIGMPEPDAQRF 109
Query: 471 LKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVAS-TTRV 529
              + AGV+YLH      + HRDIK  N+LLD+  N ++ DFGLA +  +        ++
Sbjct: 110 FHQLMAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKM 166
Query: 530 VGTVGYLAPEVFSSGRASTQ-TDVFGFGILILEVLSGRRPIEE 571
            GT+ Y+APE+        +  DV+  GI++  +L+G  P ++
Sbjct: 167 CGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 209

>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An Arylamide Inhibitor Length = 333

Iteration: 1
 Score = 61.2 bits (147), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 61/265 (23%), Positives = 118/265 (44%), Gaps = 39/265 (14%)
Query: 394 VKRISHENDGGTRAFLAEISSLGRL-KHKSLVGLRGWCKREKGSLMLVYDYMENGSLDKW 452
           +K  +H ++    A ++E+  +  L +H+++V L G C    G ++++ +Y   G L  +
Sbjct: 84  LKSTAHADE--KEALMSELKIMSHLGQHENIVNLLGACT-HGGPVLVITEYCCYGDLLNF 140
Query: 453 ------IFQCDGSMML-----SCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLL 501
                 + + D +  +     S  + +     VA G+ +L     K  +HRD+ + NVLL
Sbjct: 141 LRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLAS---KNCIHRDVAARNVLL 197
Query: 502 DKEMNGRLGDFGLAR--MHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILI 559
                 ++GDFGLAR  M+    +      +  V ++APE       + Q+DV+ +GIL+
Sbjct: 198 TNGHVAKIGDFGLARDIMNDSNYIVKGNARL-PVKWMAPESIFDCVYTVQSDVWSYGILL 256
Query: 560 LEVLS-GRRPIEEGKPNLV--EMVWELMVQGKXXXXXXXXXXXKGGFDEDEVERVLHLGL 616
            E+ S G  P     P ++     ++L+  G            +  F    +  ++    
Sbjct: 257 WEIFSLGLNPY----PGILVNSKFYKLVKDG--------YQMAQPAFAPKNIYSIMQ--- 301
Query: 617 LCAYPDPRARPTMRQVVKVLEGKIE 641
            C   +P  RPT +Q+   L+ + +
Sbjct: 302 ACWALEPTHRPTFQQICSFLQEQAQ 326

>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 61.2 bits (147), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 47/163 (28%), Positives = 79/163 (48%), Gaps = 9/163 (5%)
Query: 411 EISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRV 470
           EI     L H+++V   G  +RE     L  +Y   G L     + +  + +   +  R 
Sbjct: 54  EICINKMLNHENVVKFYGH-RREGNIQYLFLEYCSGGEL---FDRIEPDIGMPEPDAQRF 109
Query: 471 LKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVAS-TTRV 529
              + AGV+YLH      + HRDIK  N+LLD+  N ++ DFGLA +  +        ++
Sbjct: 110 FHQLMAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKM 166
Query: 530 VGTVGYLAPEVFSSGRASTQ-TDVFGFGILILEVLSGRRPIEE 571
            GT+ Y+APE+        +  DV+  GI++  +L+G  P ++
Sbjct: 167 CGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 209

>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma Kinase Catalytic Domain Length = 327

Iteration: 1
 Score = 61.2 bits (147), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 51/185 (27%), Positives = 87/185 (47%), Gaps = 17/185 (9%)
Query: 391 EIAVK---RISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENG 447
           ++AVK    +  E D     FL E   + +L H+++V   G   +     +L+ + M  G
Sbjct: 63  QVAVKTLPEVCSEQD--ELDFLMEALIISKLNHQNIVRCIGVSLQSLPRFILL-ELMAGG 119
Query: 448 SLDKWIFQC----DGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDK 503
            L  ++ +          L+  + + V +D+A G  YL E      +HRDI + N LL  
Sbjct: 120 DLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEE---NHFIHRDIAARNCLLTC 176
Query: 504 EMNGR---LGDFGLAR-MHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILI 559
              GR   +GDFG+AR ++           +  V ++ PE F  G  +++TD + FG+L+
Sbjct: 177 PGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLL 236
Query: 560 LEVLS 564
            E+ S
Sbjct: 237 WEIFS 241

>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 61.2 bits (147), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 47/163 (28%), Positives = 79/163 (48%), Gaps = 9/163 (5%)
Query: 411 EISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRV 470
           EI     L H+++V   G  +RE     L  +Y   G L     + +  + +   +  R 
Sbjct: 54  EICINKMLNHENVVKFYGH-RREGNIQYLFLEYCSGGEL---FDRIEPDIGMPEPDAQRF 109
Query: 471 LKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVAS-TTRV 529
              + AGV+YLH      + HRDIK  N+LLD+  N ++ DFGLA +  +        ++
Sbjct: 110 FHQLMAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKM 166
Query: 530 VGTVGYLAPEVFSSGRASTQ-TDVFGFGILILEVLSGRRPIEE 571
            GT+ Y+APE+        +  DV+  GI++  +L+G  P ++
Sbjct: 167 CGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 209

>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent Protein Kinase Cgd3_920 From Cryptosporidium Parvum Length = 286

Iteration: 1
 Score = 61.2 bits (147), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 52/183 (28%), Positives = 90/183 (49%), Gaps = 15/183 (8%)
Query: 391 EIAVKRISHEN--DGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGS 448
           E AVK I+  +  +  T   L E+  L +L H +++ L    + +  S  +V +    G 
Sbjct: 49  EYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILE-DSSSFYIVGELYTGGE 107
Query: 449 LDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLL---DKEM 505
           L   I +       S  +  R++K V +G+ Y+H+     ++HRD+K  N+LL   +K+ 
Sbjct: 108 LFDEIIK---RKRFSEHDAARIIKQVFSGITYMHK---HNIVHRDLKPENILLESKEKDC 161
Query: 506 NGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSG 565
           + ++ DFGL+      Q       +GT  Y+APEV   G    + DV+  G+++  +LSG
Sbjct: 162 DIKIIDFGLSTC--FQQNTKMKDRIGTAYYIAPEVL-RGTYDEKCDVWSAGVILYILLSG 218
Query: 566 RRP 568
             P
Sbjct: 219 TPP 221

>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 61.2 bits (147), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 47/163 (28%), Positives = 79/163 (48%), Gaps = 9/163 (5%)
Query: 411 EISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRV 470
           EI     L H+++V   G  +RE     L  +Y   G L     + +  + +   +  R 
Sbjct: 54  EICINKMLNHENVVKFYG-HRREGNIQYLFLEYCSGGEL---FDRIEPDIGMPEPDAQRF 109
Query: 471 LKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVAS-TTRV 529
              + AGV+YLH      + HRDIK  N+LLD+  N ++ DFGLA +  +        ++
Sbjct: 110 FHQLMAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKM 166
Query: 530 VGTVGYLAPEVFSSGRASTQ-TDVFGFGILILEVLSGRRPIEE 571
            GT+ Y+APE+        +  DV+  GI++  +L+G  P ++
Sbjct: 167 XGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 209

>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 61.2 bits (147), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 47/163 (28%), Positives = 79/163 (48%), Gaps = 9/163 (5%)
Query: 411 EISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRV 470
           EI     L H+++V   G  +RE     L  +Y   G L     + +  + +   +  R 
Sbjct: 54  EIXINKMLNHENVVKFYG-HRREGNIQYLFLEYCSGGEL---FDRIEPDIGMPEPDAQRF 109
Query: 471 LKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVAS-TTRV 529
              + AGV+YLH      + HRDIK  N+LLD+  N ++ DFGLA +  +        ++
Sbjct: 110 FHQLMAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKM 166
Query: 530 VGTVGYLAPEVFSSGRASTQ-TDVFGFGILILEVLSGRRPIEE 571
            GT+ Y+APE+        +  DV+  GI++  +L+G  P ++
Sbjct: 167 CGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 209

>pdb|4FST|A Chain A, Crystal Structure Of The Chk1 Length = 269

Iteration: 1
 Score = 61.2 bits (147), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 47/163 (28%), Positives = 79/163 (48%), Gaps = 9/163 (5%)
Query: 411 EISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRV 470
           EI     L H+++V   G  +RE     L  +Y   G L     + +  + +   +  R 
Sbjct: 54  EICINKMLNHENVVKFYG-HRREGNIQYLFLEYCSGGEL---FDRIEPDIGMPEPDAQRF 109
Query: 471 LKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVAS-TTRV 529
              + AGV+YLH      + HRDIK  N+LLD+  N ++ DFGLA +  +        ++
Sbjct: 110 FHQLMAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKM 166
Query: 530 VGTVGYLAPEVFSSGRASTQ-TDVFGFGILILEVLSGRRPIEE 571
            GT+ Y+APE+        +  DV+  GI++  +L+G  P ++
Sbjct: 167 XGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 209

>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium Parvum Calcium Dependent Protein Kinase In Complex With 3- Mb-Pp1 Length = 287

Iteration: 1
 Score = 61.2 bits (147), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 52/183 (28%), Positives = 90/183 (49%), Gaps = 15/183 (8%)
Query: 391 EIAVKRISHEN--DGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGS 448
           E AVK I+  +  +  T   L E+  L +L H +++ L    + +  S  +V +    G 
Sbjct: 49  EYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILE-DSSSFYIVGELYTGGE 107
Query: 449 LDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLL---DKEM 505
           L   I +       S  +  R++K V +G+ Y+H+     ++HRD+K  N+LL   +K+ 
Sbjct: 108 LFDEIIK---RKRFSEHDAARIIKQVFSGITYMHK---HNIVHRDLKPENILLESKEKDC 161
Query: 506 NGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSG 565
           + ++ DFGL+      Q       +GT  Y+APEV   G    + DV+  G+++  +LSG
Sbjct: 162 DIKIIDFGLSTC--FQQNTKMKDRIGTAYYIAPEVL-RGTYDEKCDVWSAGVILYILLSG 218
Query: 566 RRP 568
             P
Sbjct: 219 TPP 221

>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase Domain Length = 317

Iteration: 1
 Score = 61.2 bits (147), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 62/261 (23%), Positives = 119/261 (45%), Gaps = 35/261 (13%)
Query: 394 VKRISHENDGGTRAFLAEISSLGRL-KHKSLVGLRGWCKREKGSLMLVYDYMENGSLDKW 452
           +K  +H ++    A ++E+  +  L +H+++V L G C    G ++++ +Y   G L  +
Sbjct: 76  LKSTAHADE--KEALMSELKIMSHLGQHENIVNLLGACTH-GGPVLVITEYCCYGDLLNF 132
Query: 453 IFQCDGSMMLSCEERIRVLKD-------VAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEM 505
           + +   + +   + R   L+D       VA G+ +L     K  +HRD+ + NVLL    
Sbjct: 133 LRRKAEADLDKEDGRPLELRDLLHFSSQVAQGMAFLAS---KNCIHRDVAARNVLLTNGH 189
Query: 506 NGRLGDFGLAR--MHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVL 563
             ++GDFGLAR  M+    +      +  V ++APE       + Q+DV+ +GIL+ E+ 
Sbjct: 190 VAKIGDFGLARDIMNDSNYIVKGNARL-PVKWMAPESIFDCVYTVQSDVWSYGILLWEIF 248
Query: 564 S-GRRPIEEGKPNLV--EMVWELMVQGKXXXXXXXXXXXKGGFDEDEVERVLHLGLLCAY 620
           S G  P     P ++     ++L+  G            +  F    +  ++     C  
Sbjct: 249 SLGLNPY----PGILVNSKFYKLVKDG--------YQMAQPAFAPKNIYSIMQ---ACWA 293
Query: 621 PDPRARPTMRQVVKVLEGKIE 641
            +P  RPT +Q+   L+ + +
Sbjct: 294 LEPTHRPTFQQICSFLQEQAQ 314

>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights Into Hydrogen Bonding And Protein-Ligand Affinity Length = 297

Iteration: 1
 Score = 61.2 bits (147), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 47/163 (28%), Positives = 79/163 (48%), Gaps = 9/163 (5%)
Query: 411 EISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRV 470
           EI     L H+++V   G  +RE     L  +Y   G L     + +  + +   +  R 
Sbjct: 55  EICINKMLNHENVVKFYGH-RREGNIQYLFLEYCSGGEL---FDRIEPDIGMPEPDAQRF 110
Query: 471 LKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVAS-TTRV 529
              + AGV+YLH      + HRDIK  N+LLD+  N ++ DFGLA +  +        ++
Sbjct: 111 FHQLMAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKM 167
Query: 530 VGTVGYLAPEVFSSGRASTQ-TDVFGFGILILEVLSGRRPIEE 571
            GT+ Y+APE+        +  DV+  GI++  +L+G  P ++
Sbjct: 168 CGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 210

>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint Kinase Chk1 Length = 289

Iteration: 1
 Score = 61.2 bits (147), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 47/163 (28%), Positives = 79/163 (48%), Gaps = 9/163 (5%)
Query: 411 EISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRV 470
           EI     L H+++V   G  +RE     L  +Y   G L     + +  + +   +  R 
Sbjct: 55  EICINKMLNHENVVKFYGH-RREGNIQYLFLEYCSGGEL---FDRIEPDIGMPEPDAQRF 110
Query: 471 LKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVAS-TTRV 529
              + AGV+YLH      + HRDIK  N+LLD+  N ++ DFGLA +  +        ++
Sbjct: 111 FHQLMAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKM 167
Query: 530 VGTVGYLAPEVFSSGRASTQ-TDVFGFGILILEVLSGRRPIEE 571
            GT+ Y+APE+        +  DV+  GI++  +L+G  P ++
Sbjct: 168 CGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 210

>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine Analog Length = 295

Iteration: 1
 Score = 61.2 bits (147), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 47/163 (28%), Positives = 79/163 (48%), Gaps = 9/163 (5%)
Query: 411 EISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRV 470
           EI     L H+++V   G  +RE     L  +Y   G L     + +  + +   +  R 
Sbjct: 55  EICINKMLNHENVVKFYGH-RREGNIQYLFLEYCSGGEL---FDRIEPDIGMPEPDAQRF 110
Query: 471 LKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVAS-TTRV 529
              + AGV+YLH      + HRDIK  N+LLD+  N ++ DFGLA +  +        ++
Sbjct: 111 FHQLMAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKM 167
Query: 530 VGTVGYLAPEVFSSGRASTQ-TDVFGFGILILEVLSGRRPIEE 571
            GT+ Y+APE+        +  DV+  GI++  +L+G  P ++
Sbjct: 168 CGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 210

>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 61.2 bits (147), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 47/163 (28%), Positives = 79/163 (48%), Gaps = 9/163 (5%)
Query: 411 EISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRV 470
           EI     L H+++V   G  +RE     L  +Y   G L     + +  + +   +  R 
Sbjct: 54  EICINKMLNHENVVKFYG-HRREGNIQYLFLEYCSGGEL---FDRIEPDIGMPEPDAQRF 109
Query: 471 LKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVAS-TTRV 529
              + AGV+YLH      + HRDIK  N+LLD+  N ++ DFGLA +  +        ++
Sbjct: 110 FHQLMAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKM 166
Query: 530 VGTVGYLAPEVFSSGRASTQ-TDVFGFGILILEVLSGRRPIEE 571
            GT+ Y+APE+        +  DV+  GI++  +L+G  P ++
Sbjct: 167 XGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 209

>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy) Quinolin-4-Yloxy)benzofuran-3-Carboxamide) Length = 316

Iteration: 1
 Score = 61.2 bits (147), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 50/192 (26%), Positives = 92/192 (47%), Gaps = 25/192 (13%)
Query: 392 IAVKRISHENDGGT----RAFLAEISSLGRLKHK-SLVGLRGWCKREKGSLMLVYDYMEN 446
           +AVK +    +G T    RA ++E+  L  + H  ++V L G C +  G LM++ ++ + 
Sbjct: 60  VAVKML---KEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKF 116
Query: 447 GSLDKWIFQCDGSMM-------------LSCEERIRVLKDVAAGVLYLHEGWEKKVLHRD 493
           G+L  ++       +             L+ E  I     VA G+ +L     +K +HRD
Sbjct: 117 GNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLAS---RKCIHRD 173
Query: 494 IKSSNVLLDKEMNGRLGDFGLAR-MHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDV 552
           + + N+LL ++   ++ DFGLAR ++              + ++APE       + Q+DV
Sbjct: 174 LAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDV 233
Query: 553 FGFGILILEVLS 564
           + FG+L+ E+ S
Sbjct: 234 WSFGVLLWEIFS 245

>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By Structure Based Design And Optimization Of Thiophene Carboxamide Ureas Length = 276

Iteration: 1
 Score = 60.8 bits (146), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 47/163 (28%), Positives = 79/163 (48%), Gaps = 9/163 (5%)
Query: 411 EISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRV 470
           EI     L H+++V   G  +RE     L  +Y   G L     + +  + +   +  R 
Sbjct: 55  EIXINKMLNHENVVKFYG-HRREGNIQYLFLEYCSGGEL---FDRIEPDIGMPEPDAQRF 110
Query: 471 LKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVAS-TTRV 529
              + AGV+YLH      + HRDIK  N+LLD+  N ++ DFGLA +  +        ++
Sbjct: 111 FHQLMAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKM 167
Query: 530 VGTVGYLAPEVFSSGRASTQ-TDVFGFGILILEVLSGRRPIEE 571
            GT+ Y+APE+        +  DV+  GI++  +L+G  P ++
Sbjct: 168 XGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 210

>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr) Kinase Domain Length = 316

Iteration: 1
 Score = 60.8 bits (146), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 50/192 (26%), Positives = 92/192 (47%), Gaps = 25/192 (13%)
Query: 392 IAVKRISHENDGGT----RAFLAEISSLGRLKHK-SLVGLRGWCKREKGSLMLVYDYMEN 446
           +AVK +    +G T    RA ++E+  L  + H  ++V L G C +  G LM++ ++ + 
Sbjct: 60  VAVKML---KEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKF 116
Query: 447 GSLDKWIFQCDGSMM-------------LSCEERIRVLKDVAAGVLYLHEGWEKKVLHRD 493
           G+L  ++       +             L+ E  I     VA G+ +L     +K +HRD
Sbjct: 117 GNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLAS---RKCIHRD 173
Query: 494 IKSSNVLLDKEMNGRLGDFGLAR-MHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDV 552
           + + N+LL ++   ++ DFGLAR ++              + ++APE       + Q+DV
Sbjct: 174 LAARNILLSEKNVVKICDFGLARDIYKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDV 233
Query: 553 FGFGILILEVLS 564
           + FG+L+ E+ S
Sbjct: 234 WSFGVLLWEIFS 245

>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 60.8 bits (146), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 47/163 (28%), Positives = 79/163 (48%), Gaps = 9/163 (5%)
Query: 411 EISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRV 470
           EI     L H+++V   G  +RE     L  +Y   G L     + +  + +   +  R 
Sbjct: 54  EIXINKMLNHENVVKFYG-HRREGNIQYLFLEYCSGGEL---FDRIEPDIGMPEPDAQRF 109
Query: 471 LKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVAS-TTRV 529
              + AGV+YLH      + HRDIK  N+LLD+  N ++ DFGLA +  +        ++
Sbjct: 110 FHQLMAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKM 166
Query: 530 VGTVGYLAPEVFSSGRASTQ-TDVFGFGILILEVLSGRRPIEE 571
            GT+ Y+APE+        +  DV+  GI++  +L+G  P ++
Sbjct: 167 XGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 209

>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2 With A [1, 3]thiazolo[5,4-B]pyridine Derivative Length = 318

Iteration: 1
 Score = 60.8 bits (146), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 50/192 (26%), Positives = 92/192 (47%), Gaps = 25/192 (13%)
Query: 392 IAVKRISHENDGGT----RAFLAEISSLGRLKHK-SLVGLRGWCKREKGSLMLVYDYMEN 446
           +AVK +    +G T    RA ++E+  L  + H  ++V L G C +  G LM++ ++ + 
Sbjct: 62  VAVKML---KEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKF 118
Query: 447 GSLDKWIFQCDGSMM-------------LSCEERIRVLKDVAAGVLYLHEGWEKKVLHRD 493
           G+L  ++       +             L+ E  I     VA G+ +L     +K +HRD
Sbjct: 119 GNLSTYLRSKRNEFVPYKEAPEDLYKDFLTLEHLICYSFQVAKGMEFLAS---RKCIHRD 175
Query: 494 IKSSNVLLDKEMNGRLGDFGLAR-MHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDV 552
           + + N+LL ++   ++ DFGLAR ++              + ++APE       + Q+DV
Sbjct: 176 LAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDV 235
Query: 553 FGFGILILEVLS 564
           + FG+L+ E+ S
Sbjct: 236 WSFGVLLWEIFS 247

>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120 Length = 316

Iteration: 1
 Score = 60.8 bits (146), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 50/190 (26%), Positives = 91/190 (47%), Gaps = 23/190 (12%)
Query: 392 IAVKRISHENDGGT----RAFLAEISSLGRLKHK-SLVGLRGWCKREKGSLMLVYDYMEN 446
           +AVK +    +G T    RA ++E+  L  + H  ++V L G C +  G LM++ ++ + 
Sbjct: 62  VAVKML---KEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKF 118
Query: 447 GSLDKWIFQCDGSMM-----------LSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIK 495
           G+L  ++       +           L+ E  I     VA G+ +L     +K +HRD+ 
Sbjct: 119 GNLSTYLRSKRNEFVPYKPEDLYKDFLTLEHLIXYSFQVAKGMEFLAS---RKXIHRDLA 175
Query: 496 SSNVLLDKEMNGRLGDFGLAR-MHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFG 554
           + N+LL ++   ++ DFGLAR +               + ++APE       + Q+DV+ 
Sbjct: 176 ARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWS 235
Query: 555 FGILILEVLS 564
           FG+L+ E+ S
Sbjct: 236 FGVLLWEIFS 245

>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626 Length = 306

Iteration: 1
 Score = 60.8 bits (146), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 44/172 (25%), Positives = 79/172 (45%), Gaps = 12/172 (6%)
Query: 400 ENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGS 459
           E  G       E+     L+H +++ L G+   +   + L+ +Y   G+    +++    
Sbjct: 73  EKAGVEHQLRREVEIQSHLRHPNILRLYGYF-HDATRVYLILEYAPLGT----VYRELQK 127
Query: 460 MMLSCEERIRV-LKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMH 518
           +    E+R    + ++A  + Y H    K+V+HRDIK  N+LL      ++ DFG +   
Sbjct: 128 LSKFDEQRTATYITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWS--- 181
Query: 519 GHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIE 570
            H   +  T + GT+ YL PE+        + D++  G+L  E L G+ P E
Sbjct: 182 VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 233

>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300 Length = 280

Iteration: 1
 Score = 60.8 bits (146), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 44/172 (25%), Positives = 79/172 (45%), Gaps = 12/172 (6%)
Query: 400 ENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGS 459
           E  G       E+     L+H +++ L G+   +   + L+ +Y   G+    +++    
Sbjct: 47  EKAGVEHQLRREVEIQSHLRHPNILRLYGYF-HDATRVYLILEYAPLGT----VYRELQK 101
Query: 460 MMLSCEERIRV-LKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMH 518
           +    E+R    + ++A  + Y H    K+V+HRDIK  N+LL      ++ DFG +   
Sbjct: 102 LSKFDEQRTATYITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWS--- 155
Query: 519 GHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIE 570
            H   +  T + GT+ YL PE+        + D++  G+L  E L G+ P E
Sbjct: 156 VHAPSSRRTELCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 207

>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase Domains) In Complex With Axitinib (Ag-013736) (N-Methyl-2-( 3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)- Benzamide) Length = 353

Iteration: 1
 Score = 60.8 bits (146), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 50/192 (26%), Positives = 92/192 (47%), Gaps = 25/192 (13%)
Query: 392 IAVKRISHENDGGT----RAFLAEISSLGRLKHK-SLVGLRGWCKREKGSLMLVYDYMEN 446
           +AVK +    +G T    RA ++E+  L  + H  ++V L G C +  G LM++ ++ + 
Sbjct: 97  VAVKML---KEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKF 153
Query: 447 GSLDKWIFQCDGSMM-------------LSCEERIRVLKDVAAGVLYLHEGWEKKVLHRD 493
           G+L  ++       +             L+ E  I     VA G+ +L     +K +HRD
Sbjct: 154 GNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLAS---RKCIHRD 210
Query: 494 IKSSNVLLDKEMNGRLGDFGLAR-MHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDV 552
           + + N+LL ++   ++ DFGLAR ++              + ++APE       + Q+DV
Sbjct: 211 LAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDV 270
Query: 553 FGFGILILEVLS 564
           + FG+L+ E+ S
Sbjct: 271 WSFGVLLWEIFS 282

>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Pyridyl-Pyrimidine Benzimidazole Inhibitor Length = 314

Iteration: 1
 Score = 60.8 bits (146), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 50/192 (26%), Positives = 92/192 (47%), Gaps = 25/192 (13%)
Query: 392 IAVKRISHENDGGT----RAFLAEISSLGRLKHK-SLVGLRGWCKREKGSLMLVYDYMEN 446
           +AVK +    +G T    RA ++E+  L  + H  ++V L G C +  G LM++ ++ + 
Sbjct: 51  VAVKML---KEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKF 107
Query: 447 GSLDKWIFQCDGSMM-------------LSCEERIRVLKDVAAGVLYLHEGWEKKVLHRD 493
           G+L  ++       +             L+ E  I     VA G+ +L     +K +HRD
Sbjct: 108 GNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLAS---RKCIHRD 164
Query: 494 IKSSNVLLDKEMNGRLGDFGLAR-MHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDV 552
           + + N+LL ++   ++ DFGLAR ++              + ++APE       + Q+DV
Sbjct: 165 LAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDV 224
Query: 553 FGFGILILEVLS 564
           + FG+L+ E+ S
Sbjct: 225 WSFGVLLWEIFS 236

>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Pyrazolone Inhibitor Length = 314

Iteration: 1
 Score = 60.8 bits (146), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 50/192 (26%), Positives = 92/192 (47%), Gaps = 25/192 (13%)
Query: 392 IAVKRISHENDGGT----RAFLAEISSLGRLKHK-SLVGLRGWCKREKGSLMLVYDYMEN 446
           +AVK +    +G T    RA ++E+  L  + H  ++V L G C +  G LM++ ++ + 
Sbjct: 51  VAVKML---KEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKF 107
Query: 447 GSLDKWIFQCDGSMM-------------LSCEERIRVLKDVAAGVLYLHEGWEKKVLHRD 493
           G+L  ++       +             L+ E  I     VA G+ +L     +K +HRD
Sbjct: 108 GNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLAS---RKCIHRD 164
Query: 494 IKSSNVLLDKEMNGRLGDFGLAR-MHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDV 552
           + + N+LL ++   ++ DFGLAR ++              + ++APE       + Q+DV
Sbjct: 165 LAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDV 224
Query: 553 FGFGILILEVLS 564
           + FG+L+ E+ S
Sbjct: 225 WSFGVLLWEIFS 236

>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I) Length = 327

Iteration: 1
 Score = 60.8 bits (146), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 42/159 (26%), Positives = 80/159 (50%), Gaps = 8/159 (5%)
Query: 410 AEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIR 469
           AE + L  +KH  +V L  +  +  G L L+ +Y+  G L     Q +   +   +    
Sbjct: 70  AERNILEEVKHPFIVDLI-YAFQTGGKLYLILEYLSGGEL---FMQLEREGIFMEDTACF 125
Query: 470 VLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRV 529
            L +++  + +LH+   K +++RD+K  N++L+ + + +L DFGL +   H    + T  
Sbjct: 126 YLAEISMALGHLHQ---KGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHT-F 181
Query: 530 VGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRP 568
            GT+ Y+APE+      +   D +  G L+ ++L+G  P
Sbjct: 182 CGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPP 220

>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa Length = 267

Iteration: 1
 Score = 60.5 bits (145), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 44/172 (25%), Positives = 79/172 (45%), Gaps = 12/172 (6%)
Query: 400 ENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGS 459
           E  G       E+     L+H +++ L G+   +   + L+ +Y   G+    +++    
Sbjct: 46  EKAGVEHQLRREVEIQSHLRHPNILRLYGYF-HDATRVYLILEYAPLGT----VYRELQK 100
Query: 460 MMLSCEERIRV-LKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMH 518
           +    E+R    + ++A  + Y H    K+V+HRDIK  N+LL      ++ DFG +   
Sbjct: 101 LSKFDEQRTATYITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWS--- 154
Query: 519 GHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIE 570
            H   +  T + GT+ YL PE+        + D++  G+L  E L G+ P E
Sbjct: 155 VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 206

>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain Of Csf-1r Length = 329

Iteration: 1
 Score = 60.5 bits (145), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 62/261 (23%), Positives = 119/261 (45%), Gaps = 35/261 (13%)
Query: 394 VKRISHENDGGTRAFLAEISSLGRL-KHKSLVGLRGWCKREKGSLMLVYDYMENGSLDKW 452
           +K  +H ++    A ++E+  +  L +H+++V L G C    G ++++ +Y   G L  +
Sbjct: 84  LKSTAHADE--KEALMSELKIMSHLGQHENIVNLLGACTH-GGPVLVITEYCCYGDLLNF 140
Query: 453 IFQCDGSMMLSCEERIRVLKD-------VAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEM 505
           + +   + +   + R   L+D       VA G+ +L     K  +HRD+ + NVLL    
Sbjct: 141 LRRKAEADLDKEDGRPLELRDLLHFSSQVAQGMAFLAS---KNCIHRDVAARNVLLTNGH 197
Query: 506 NGRLGDFGLAR--MHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVL 563
             ++GDFGLAR  M+    +      +  V ++APE       + Q+DV+ +GIL+ E+ 
Sbjct: 198 VAKIGDFGLARDIMNDSNYIVKGNARL-PVKWMAPESIFDCVYTVQSDVWSYGILLWEIF 256
Query: 564 S-GRRPIEEGKPNLV--EMVWELMVQGKXXXXXXXXXXXKGGFDEDEVERVLHLGLLCAY 620
           S G  P     P ++     ++L+  G            +  F    +  ++     C  
Sbjct: 257 SLGLNPY----PGILVNSKFYKLVKDG--------YQMAQPAFAPKNIYSIMQ---ACWA 301
Query: 621 PDPRARPTMRQVVKVLEGKIE 641
            +P  RPT +Q+   L+ + +
Sbjct: 302 LEPTHRPTFQQICSFLQEQAQ 322

>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And Tpx2 Length = 268

Iteration: 1
 Score = 60.5 bits (145), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 44/172 (25%), Positives = 79/172 (45%), Gaps = 12/172 (6%)
Query: 400 ENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGS 459
           E  G       E+     L+H +++ L G+   +   + L+ +Y   G+    +++    
Sbjct: 47  EKAGVEHQLRREVEIQSHLRHPNILRLYGYF-HDATRVYLILEYAPLGT----VYRELQK 101
Query: 460 MMLSCEERIRV-LKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMH 518
           +    E+R    + ++A  + Y H    K+V+HRDIK  N+LL      ++ DFG +   
Sbjct: 102 LSKFDEQRTATYITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWS--- 155
Query: 519 GHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIE 570
            H   +  T + GT+ YL PE+        + D++  G+L  E L G+ P E
Sbjct: 156 VHAPSSRRTXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 207

>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1, Cgd3_920 Length = 486

Iteration: 1
 Score = 60.5 bits (145), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 52/183 (28%), Positives = 90/183 (49%), Gaps = 15/183 (8%)
Query: 391 EIAVKRISHEN--DGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGS 448
           E AVK I+  +  +  T   L E+  L +L H +++ L    + +  S  +V +    G 
Sbjct: 49  EYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILE-DSSSFYIVGELYTGGE 107
Query: 449 LDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLL---DKEM 505
           L   I +       S  +  R++K V +G+ Y+H+     ++HRD+K  N+LL   +K+ 
Sbjct: 108 LFDEIIK---RKRFSEHDAARIIKQVFSGITYMHK---HNIVHRDLKPENILLESKEKDC 161
Query: 506 NGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSG 565
           + ++ DFGL+      Q       +GT  Y+APEV   G    + DV+  G+++  +LSG
Sbjct: 162 DIKIIDFGLSTC--FQQNTKMKDRIGTAYYIAPEVL-RGTYDEKCDVWSAGVILYILLSG 218
Query: 566 RRP 568
             P
Sbjct: 219 TPP 221

>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine- Threonine Kinase Length = 297

Iteration: 1
 Score = 60.5 bits (145), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 44/172 (25%), Positives = 79/172 (45%), Gaps = 12/172 (6%)
Query: 400 ENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGS 459
           E  G       E+     L+H +++ L G+   +   + L+ +Y   G+    +++    
Sbjct: 64  EKAGVEHQLRREVEIQSHLRHPNILRLYGYF-HDATRVYLILEYAPLGT----VYRELQK 118
Query: 460 MMLSCEERIRV-LKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMH 518
           +    E+R    + ++A  + Y H    K+V+HRDIK  N+LL      ++ DFG +   
Sbjct: 119 LSKFDEQRTATYITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWS--- 172
Query: 519 GHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIE 570
            H   +  T + GT+ YL PE+        + D++  G+L  E L G+ P E
Sbjct: 173 VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 224

>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid- Regulated Kinase 1 In Complex With Amp-Pnp Length = 373

Iteration: 1
 Score = 60.5 bits (145), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 48/156 (30%), Positives = 75/156 (48%), Gaps = 10/156 (6%)
Query: 415 LGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLK-D 473
           L  +KH  LVGL  +  +    L  V DY+  G L  +  Q +   +   E R R    +
Sbjct: 93  LKNVKHPFLVGLH-FSFQTADKLYFVLDYINGGEL-FYHLQRERCFL---EPRARFYAAE 147
Query: 474 VAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRVVGTV 533
           +A+ + YLH      +++RD+K  N+LLD + +  L DFGL + +     ++T+   GT 
Sbjct: 148 IASALGYLHS---LNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHN-STTSTFCGTP 203
Query: 534 GYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPI 569
            YLAPEV          D +  G ++ E+L G  P 
Sbjct: 204 EYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPF 239

>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant Length = 262

Iteration: 1
 Score = 60.5 bits (145), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 44/172 (25%), Positives = 79/172 (45%), Gaps = 12/172 (6%)
Query: 400 ENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGS 459
           E  G       E+     L+H +++ L G+   +   + L+ +Y   G+    +++    
Sbjct: 44  EKAGVEHQLRREVEIQSHLRHPNILRLYGYF-HDATRVYLILEYAPLGT----VYRELQK 98
Query: 460 MMLSCEERIRV-LKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMH 518
           +    E+R    + ++A  + Y H    K+V+HRDIK  N+LL      ++ DFG +   
Sbjct: 99  LSKFDEQRTATYITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWS--- 152
Query: 519 GHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIE 570
            H   +  T + GT+ YL PE+        + D++  G+L  E L G+ P E
Sbjct: 153 VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 204

>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358 Length = 280

Iteration: 1
 Score = 60.5 bits (145), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 44/172 (25%), Positives = 79/172 (45%), Gaps = 12/172 (6%)
Query: 400 ENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGS 459
           E  G       E+     L+H +++ L G+   +   + L+ +Y   G+    +++    
Sbjct: 47  EKAGVEHQLRREVEIQSHLRHPNILRLYGYF-HDATRVYLILEYAPLGT----VYRELQK 101
Query: 460 MMLSCEERIRV-LKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMH 518
           +    E+R    + ++A  + Y H    K+V+HRDIK  N+LL      ++ DFG +   
Sbjct: 102 LSKFDEQRTATYITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWS--- 155
Query: 519 GHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIE 570
            H   +  T + GT+ YL PE+        + D++  G+L  E L G+ P E
Sbjct: 156 VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 207

>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea Inhibitor Length = 316

Iteration: 1
 Score = 60.5 bits (145), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 50/191 (26%), Positives = 91/191 (47%), Gaps = 24/191 (12%)
Query: 392 IAVKRISHENDGGT----RAFLAEISSLGRLKHK-SLVGLRGWCKREKGSLMLVYDYMEN 446
           +AVK +    +G T    RA ++E+  L  + H  ++V L G C +  G LM++ ++ + 
Sbjct: 61  VAVKML---KEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKF 117
Query: 447 GSLDKWIFQCDGSMM------------LSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDI 494
           G+L  ++       +            L+ E  I     VA G+ +L     +K +HRD+
Sbjct: 118 GNLSTYLRSKRNEFVPYKTPEDLYKDFLTLEHLICYSFQVAKGMEFLAS---RKCIHRDL 174
Query: 495 KSSNVLLDKEMNGRLGDFGLAR-MHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVF 553
            + N+LL ++   ++ DFGLAR +               + ++APE       + Q+DV+
Sbjct: 175 AARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVW 234
Query: 554 GFGILILEVLS 564
            FG+L+ E+ S
Sbjct: 235 SFGVLLWEIFS 245

>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain Length = 308

Iteration: 1
 Score = 60.5 bits (145), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 52/209 (24%), Positives = 103/209 (49%), Gaps = 27/209 (12%)
Query: 392 IAVKRISHENDGGTRA-FLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLD 450
           +A+K +  + +G  R  F  E     RL+H ++V L G   +++  L +++ Y  +G L 
Sbjct: 59  VAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQ-PLSMIFSYCSHGDLH 117
Query: 451 KWIFQCD-----GSM--------MLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSS 497
           +++         GS          L   + + ++  +AAG+ YL       V+H+D+ + 
Sbjct: 118 EFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSS---HHVVHKDLATR 174
Query: 498 NVLLDKEMNGRLGDFGLARMHGHGQVASTTRVVGT----VGYLAPEVFSSGRASTQTDVF 553
           NVL+  ++N ++ D GL R       A   +++G     + ++APE    G+ S  +D++
Sbjct: 175 NVLVYDKLNVKISDLGLFR---EVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIW 231
Query: 554 GFGILILEVLS-GRRP-IEEGKPNLVEMV 580
            +G+++ EV S G +P       ++VEM+
Sbjct: 232 SYGVVLWEVFSYGLQPYCGYSNQDVVEMI 260

>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420 Length = 504

Iteration: 1
 Score = 60.5 bits (145), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 47/167 (28%), Positives = 82/167 (49%), Gaps = 25/167 (14%)
Query: 411 EISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIF------QCDGSMMLSC 464
           EIS L  L H +++ L    + +K    LV ++ E G L + I       +CD +     
Sbjct: 96  EISLLKSLDHPNIIKLFDVFE-DKKYFYLVTEFYEGGELFEQIINRHKFDECDAA----- 149
Query: 465 EERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKE---MNGRLGDFGLARMHGHG 521
                ++K + +G+ YLH+     ++HRDIK  N+LL+ +   +N ++ DFGL+      
Sbjct: 150 ----NIMKQILSGICYLHK---HNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKD 202
Query: 522 QVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRP 568
                   +GT  Y+APEV    + + + DV+  G+++  +L G  P
Sbjct: 203 YKLRDR--LGTAYYIAPEVLKK-KYNEKCDVWSCGVIMYILLCGYPP 246

>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 275

Iteration: 1
 Score = 60.5 bits (145), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 44/172 (25%), Positives = 79/172 (45%), Gaps = 12/172 (6%)
Query: 400 ENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGS 459
           E  G       E+     L+H +++ L G+   +   + L+ +Y   G+    +++    
Sbjct: 50  EKAGVEHQLRREVEIQSHLRHPNILRLYGYF-HDATRVYLILEYAPLGT----VYRELQK 104
Query: 460 MMLSCEERIRV-LKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMH 518
           +    E+R    + ++A  + Y H    K+V+HRDIK  N+LL      ++ DFG +   
Sbjct: 105 LSKFDEQRTATYITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWS--- 158
Query: 519 GHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIE 570
            H   +  T + GT+ YL PE+        + D++  G+L  E L G+ P E
Sbjct: 159 VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 210

>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein Kina Length = 313

Iteration: 1
 Score = 60.5 bits (145), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 57/267 (21%), Positives = 114/267 (42%), Gaps = 26/267 (9%)
Query: 386 EGGGAEIAVKRISHENDGG--TRAFLAEISSLGRLKHKSLVGLRGWCKREKGS----LML 439
           +G   ++AVK +  +N        FL+E + +    H +++ L G C           M+
Sbjct: 59  DGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSSQGIPKPMV 118
Query: 440 VYDYMENGSLDKWIFQC---DGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKS 496
           +  +M+ G L  ++       G   +  +  ++ + D+A G+ YL     +  LHRD+ +
Sbjct: 119 ILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSN---RNFLHRDLAA 175
Query: 497 SNVLLDKEMNGRLGDFGLARMHGHGQVASTTRVVGT-VGYLAPEVFSSGRASTQTDVFGF 555
            N +L  +M   + DFGL++    G      R+    V ++A E  +    ++++DV+ F
Sbjct: 176 RNCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAF 235
Query: 556 GILILEVLSGRRPIEEGKPNLVEMVWELMVQGKXXXXXXXXXXXKGGFDEDEVERVLHLG 615
           G+ + E+ +       G  N    +++ ++ G                 ED ++ +  + 
Sbjct: 236 GVTMWEIATRGMTPYPGVQN--HEMYDYLLHGHRLKQP-----------EDCLDELYEIM 282
Query: 616 LLCAYPDPRARPTMRQVVKVLEGKIEA 642
             C   DP  RPT   +   LE  +E+
Sbjct: 283 YSCWRTDPLDRPTFSVLRLQLEKLLES 309

>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase Length = 342

Iteration: 1
 Score = 60.5 bits (145), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 45/165 (27%), Positives = 78/165 (47%), Gaps = 12/165 (7%)
Query: 408 FLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQC----DGSMMLS 463
           FL E   + +  H+++V   G   +     +L+ + M  G L  ++ +          L+
Sbjct: 95  FLMEALIISKFNHQNIVRCIGVSLQSLPRFILL-ELMAGGDLKSFLRETRPRPSQPSSLA 153
Query: 464 CEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGR---LGDFGLAR-MHG 519
             + + V +D+A G  YL E      +HRDI + N LL     GR   +GDFG+AR ++ 
Sbjct: 154 MLDLLHVARDIACGCQYLEE---NHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYR 210
Query: 520 HGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLS 564
                     +  V ++ PE F  G  +++TD + FG+L+ E+ S
Sbjct: 211 ASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 255

>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine Inhibitor Length = 283

Iteration: 1
 Score = 60.1 bits (144), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 44/172 (25%), Positives = 79/172 (45%), Gaps = 12/172 (6%)
Query: 400 ENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGS 459
           E  G       E+     L+H +++ L G+   +   + L+ +Y   G+    +++    
Sbjct: 50  EKAGVEHQLRREVEIQSHLRHPNILRLYGYF-HDATRVYLILEYAPLGT----VYRELQK 104
Query: 460 MMLSCEERIRV-LKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMH 518
           +    E+R    + ++A  + Y H    K+V+HRDIK  N+LL      ++ DFG +   
Sbjct: 105 LSKFDEQRTATYITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWS--- 158
Query: 519 GHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIE 570
            H   +  T + GT+ YL PE+        + D++  G+L  E L G+ P E
Sbjct: 159 VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 210

>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A Diaminopyrimidine Length = 281

Iteration: 1
 Score = 60.1 bits (144), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 44/172 (25%), Positives = 79/172 (45%), Gaps = 12/172 (6%)
Query: 400 ENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGS 459
           E  G       E+     L+H +++ L G+   +   + L+ +Y   G+    +++    
Sbjct: 48  EKAGVEHQLRREVEIQSHLRHPNILRLYGYF-HDATRVYLILEYAPLGT----VYRELQK 102
Query: 460 MMLSCEERIRV-LKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMH 518
           +    E+R    + ++A  + Y H    K+V+HRDIK  N+LL      ++ DFG +   
Sbjct: 103 LSKFDEQRTATYITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWS--- 156
Query: 519 GHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIE 570
            H   +  T + GT+ YL PE+        + D++  G+L  E L G+ P E
Sbjct: 157 CHAPSSRRTTLSGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 208

>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase Length = 342

Iteration: 1
 Score = 60.1 bits (144), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 50/185 (27%), Positives = 86/185 (46%), Gaps = 17/185 (9%)
Query: 391 EIAVK---RISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENG 447
           ++AVK    +  E D     FL E   + +  H+++V   G   +     +L+ + M  G
Sbjct: 77  QVAVKTLPEVCSEQD--ELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILM-ELMAGG 133
Query: 448 SLDKWIFQC----DGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDK 503
            L  ++ +          L+  + + V +D+A G  YL E      +HRDI + N LL  
Sbjct: 134 DLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEE---NHFIHRDIAARNCLLTC 190
Query: 504 EMNGR---LGDFGLAR-MHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILI 559
              GR   +GDFG+AR ++           +  V ++ PE F  G  +++TD + FG+L+
Sbjct: 191 PGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLL 250
Query: 560 LEVLS 564
            E+ S
Sbjct: 251 WEIFS 255

>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With Adpnp Length = 275

Iteration: 1
 Score = 60.1 bits (144), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 44/172 (25%), Positives = 79/172 (45%), Gaps = 12/172 (6%)
Query: 400 ENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGS 459
           E  G       E+     L+H +++ L G+   +   + L+ +Y   G+    +++    
Sbjct: 47  EKAGVEHQLRREVEIQSHLRHPNILRLYGYF-HDATRVYLILEYAPLGT----VYRELQK 101
Query: 460 MMLSCEERIRV-LKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMH 518
           +    E+R    + ++A  + Y H    K+V+HRDIK  N+LL      ++ DFG +   
Sbjct: 102 LSKFDEQRTATYITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWS--- 155
Query: 519 GHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIE 570
            H   +  T + GT+ YL PE+        + D++  G+L  E L G+ P E
Sbjct: 156 VHAPSSRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 207

>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A 5-Aminopyrimidinyl Quinazoline Inhibitor Length = 283

Iteration: 1
 Score = 60.1 bits (144), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 44/172 (25%), Positives = 79/172 (45%), Gaps = 12/172 (6%)
Query: 400 ENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGS 459
           E  G       E+     L+H +++ L G+   +   + L+ +Y   G+    +++    
Sbjct: 52  EKAGVEHQLRREVEIQSHLRHPNILRLYGYF-HDATRVYLILEYAPLGT----VYRELQK 106
Query: 460 MMLSCEERIRV-LKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMH 518
           +    E+R    + ++A  + Y H    K+V+HRDIK  N+LL      ++ DFG +   
Sbjct: 107 LSKFDEQRTATYITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWS--- 160
Query: 519 GHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIE 570
            H   +  T + GT+ YL PE+        + D++  G+L  E L G+ P E
Sbjct: 161 VHAPSSRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 212

>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2 Length = 289

Iteration: 1
 Score = 60.1 bits (144), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 52/209 (24%), Positives = 103/209 (49%), Gaps = 27/209 (12%)
Query: 392 IAVKRISHENDGGTRA-FLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLD 450
           +A+K +  + +G  R  F  E     RL+H ++V L G   +++  L +++ Y  +G L 
Sbjct: 42  VAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQ-PLSMIFSYCSHGDLH 100
Query: 451 KWIFQCD-----GSM--------MLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSS 497
           +++         GS          L   + + ++  +AAG+ YL       V+H+D+ + 
Sbjct: 101 EFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSS---HHVVHKDLATR 157
Query: 498 NVLLDKEMNGRLGDFGLARMHGHGQVASTTRVVGT----VGYLAPEVFSSGRASTQTDVF 553
           NVL+  ++N ++ D GL R       A   +++G     + ++APE    G+ S  +D++
Sbjct: 158 NVLVYDKLNVKISDLGLFR---EVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIW 214
Query: 554 GFGILILEVLS-GRRP-IEEGKPNLVEMV 580
            +G+++ EV S G +P       ++VEM+
Sbjct: 215 SYGVVLWEVFSYGLQPYCGYSNQDVVEMI 243

>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor Length = 285

Iteration: 1
 Score = 60.1 bits (144), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 44/172 (25%), Positives = 79/172 (45%), Gaps = 12/172 (6%)
Query: 400 ENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGS 459
           E  G       E+     L+H +++ L G+   +   + L+ +Y   G+    +++    
Sbjct: 52  EKAGVEHQLRREVEIQSHLRHPNILRLYGYF-HDATRVYLILEYAPLGT----VYRELQK 106
Query: 460 MMLSCEERIRV-LKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMH 518
           +    E+R    + ++A  + Y H    K+V+HRDIK  N+LL      ++ DFG +   
Sbjct: 107 LSKFDEQRTATYITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWS--- 160
Query: 519 GHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIE 570
            H   +  T + GT+ YL PE+        + D++  G+L  E L G+ P E
Sbjct: 161 VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 212

>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase Domain From Human Length = 314

Iteration: 1
 Score = 60.1 bits (144), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 51/171 (29%), Positives = 81/171 (47%), Gaps = 21/171 (12%)
Query: 411 EISSLGRLKHKSLVGLRGWCKREKG---SLMLVYDYMENGSLDKWIFQCDGSMMLSCEER 467
           EI S   +KH++L+      KR       L L+  + + GSL  ++       +++  E 
Sbjct: 59  EIFSTPGMKHENLLQFIAAEKRGSNLEVELWLITAFHDKGSLTDYL----KGNIITWNEL 114
Query: 468 IRVLKDVAAGVLYLHE--------GWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHG 519
             V + ++ G+ YLHE        G +  + HRD KS NVLL  ++   L DFGLA    
Sbjct: 115 CHVAETMSRGLSYLHEDVPWCRGEGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFE 174
Query: 520 HGQVASTTR-VVGTVGYLAPEVFSSG-----RASTQTDVFGFGILILEVLS 564
            G+    T   VGT  Y+APEV          A  + D++  G+++ E++S
Sbjct: 175 PGKPPGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELVS 225

>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase Length = 272

Iteration: 1
 Score = 60.1 bits (144), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 44/172 (25%), Positives = 79/172 (45%), Gaps = 12/172 (6%)
Query: 400 ENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGS 459
           E  G       E+     L+H +++ L G+   +   + L+ +Y   G+    +++    
Sbjct: 51  EKAGVEHQLRREVEIQSHLRHPNILRLYGYF-HDATRVYLILEYAPLGT----VYRELQK 105
Query: 460 MMLSCEERIRV-LKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMH 518
           +    E+R    + ++A  + Y H    K+V+HRDIK  N+LL      ++ DFG +   
Sbjct: 106 LSKFDEQRTATYITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWS--- 159
Query: 519 GHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIE 570
            H   +  T + GT+ YL PE+        + D++  G+L  E L G+ P E
Sbjct: 160 VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 211

>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The Murine Receptor Tyrosine Kinase Tyro3 (Sky) Length = 323

Iteration: 1
 Score = 60.1 bits (144), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 56/232 (24%), Positives = 105/232 (45%), Gaps = 36/232 (15%)
Query: 386 EGGGAEIAVKRISHE--NDGGTRAFLAEISSLGRLKHKSLVGLRGWC--KREKGSL---M 438
           +G   ++AVK +  +         FL E + +    H  +  L G     R KG L   M
Sbjct: 48  DGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAKGRLPIPM 107
Query: 439 LVYDYMENGSLDKWIFQC---DGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIK 495
           ++  +M++G L  ++      +    L  +  +R + D+A G+ YL     +  +HRD+ 
Sbjct: 108 VILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSS---RNFIHRDLA 164
Query: 496 SSNVLLDKEMNGRLGDFGLARMHGHG---QVASTTRVVGTVGYLAPEVFSSGRASTQTDV 552
           + N +L ++M   + DFGL+R    G   +    +++   V +LA E  +    +  +DV
Sbjct: 165 ARNCMLAEDMTVCVADFGLSRKIYSGDYYRQGCASKL--PVKWLALESLADNLYTVHSDV 222
Query: 553 FGFGILILEVLS-GRRP---IEEGK--------------PNLVEMVWELMVQ 586
           + FG+ + E+++ G+ P   IE  +              P  +E V++LM Q
Sbjct: 223 WAFGVTMWEIMTRGQTPYAGIENAEIYNYLIGGNRLKQPPECMEEVYDLMYQ 274

>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A Gsk3beta Inhibitor Length = 287

Iteration: 1
 Score = 60.1 bits (144), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 44/172 (25%), Positives = 79/172 (45%), Gaps = 12/172 (6%)
Query: 400 ENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGS 459
           E  G       E+     L+H +++ L G+   +   + L+ +Y   G+    +++    
Sbjct: 47  EKAGVEHQLRREVEIQSHLRHPNILRLYGYF-HDATRVYLILEYAPLGT----VYRELQK 101
Query: 460 MMLSCEERIRV-LKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMH 518
           +    E+R    + ++A  + Y H    K+V+HRDIK  N+LL      ++ DFG +   
Sbjct: 102 LSKFDEQRTATYITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWS--- 155
Query: 519 GHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIE 570
            H   +  T + GT+ YL PE+        + D++  G+L  E L G+ P E
Sbjct: 156 VHAPSSRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 207

>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A Inhibitors: Structure Basis For Potency And Specificity Length = 279

Iteration: 1
 Score = 60.1 bits (144), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 44/172 (25%), Positives = 79/172 (45%), Gaps = 12/172 (6%)
Query: 400 ENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGS 459
           E  G       E+     L+H +++ L G+   +   + L+ +Y   G+    +++    
Sbjct: 48  EKAGVEHQLRREVEIQSHLRHPNILRLYGYF-HDATRVYLILEYAPLGT----VYRELQK 102
Query: 460 MMLSCEERIRV-LKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMH 518
           +    E+R    + ++A  + Y H    K+V+HRDIK  N+LL      ++ DFG +   
Sbjct: 103 LSKFDEQRTATYITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWS--- 156
Query: 519 GHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIE 570
            H   +  T + GT+ YL PE+        + D++  G+L  E L G+ P E
Sbjct: 157 VHAPSSRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 208

>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With A Piperidine-Carboxamide Inhibitor Length = 333

Iteration: 1
 Score = 60.1 bits (144), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 50/185 (27%), Positives = 86/185 (46%), Gaps = 17/185 (9%)
Query: 391 EIAVK---RISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENG 447
           ++AVK    +  E D     FL E   + +  H+++V   G   +     +L+ + M  G
Sbjct: 69  QVAVKTLPEVCSEQD--ELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILL-ELMAGG 125
Query: 448 SLDKWIFQC----DGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDK 503
            L  ++ +          L+  + + V +D+A G  YL E      +HRDI + N LL  
Sbjct: 126 DLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEE---NHFIHRDIAARNCLLTC 182
Query: 504 EMNGR---LGDFGLAR-MHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILI 559
              GR   +GDFG+AR ++           +  V ++ PE F  G  +++TD + FG+L+
Sbjct: 183 PGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLL 242
Query: 560 LEVLS 564
            E+ S
Sbjct: 243 WEIFS 247

>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092, Delete A660- T867) At 2.28 A Resolution Length = 299

Iteration: 1
 Score = 60.1 bits (144), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 51/197 (25%), Positives = 87/197 (44%), Gaps = 32/197 (16%)
Query: 393 AVKRISHENDGGTR-AFLAEISSLGRLKHKSLVG-LRGWCKRE-----KGSLMLVYDYME 445
           A+KRI   N    R   + E+ +L +L+H  +V     W ++      + S   VY Y++
Sbjct: 34  AIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPSSPKVYLYIQ 93
Query: 446 -----NGSLDKWIFQCDGSMMLSCEER---IRVLKDVAAGVLYLHEGWEKKVLHRDIKSS 497
                  +L  W+   +G   +   ER   + +   +A  V +LH    K ++HRD+K S
Sbjct: 94  MQLCRKENLKDWM---NGRCTIEERERSVCLHIFLQIAEAVEFLHS---KGLMHRDLKPS 147
Query: 498 NVLLDKEMNGRLGDFGLARMHGHGQVAST-----------TRVVGTVGYLAPEVFSSGRA 546
           N+    +   ++GDFGL       +   T           T  VGT  Y++PE       
Sbjct: 148 NIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSY 207
Query: 547 STQTDVFGFGILILEVL 563
           S + D+F  G+++ E+L
Sbjct: 208 SHKVDIFSLGLILFELL 224

>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In Complex With Crizotinib (Pf-02341066) Length = 327

Iteration: 1
 Score = 60.1 bits (144), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 50/185 (27%), Positives = 86/185 (46%), Gaps = 17/185 (9%)
Query: 391 EIAVK---RISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENG 447
           ++AVK    +  E D     FL E   + +  H+++V   G   +     +L+ + M  G
Sbjct: 62  QVAVKTLPEVCSEQD--ELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILL-ELMAGG 118
Query: 448 SLDKWIFQC----DGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDK 503
            L  ++ +          L+  + + V +D+A G  YL E      +HRDI + N LL  
Sbjct: 119 DLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEE---NHFIHRDIAARNCLLTC 175
Query: 504 EMNGR---LGDFGLAR-MHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILI 559
              GR   +GDFG+AR ++           +  V ++ PE F  G  +++TD + FG+L+
Sbjct: 176 PGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLL 235
Query: 560 LEVLS 564
            E+ S
Sbjct: 236 WEIFS 240

>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine Kinase Domain Length = 314

Iteration: 1
 Score = 60.1 bits (144), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 63/272 (23%), Positives = 121/272 (44%), Gaps = 36/272 (13%)
Query: 387 GGGAEIAVKRIS-HENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYME 445
            G   +AVK +  + +    R  L+E + L ++ H  ++ L G C ++ G L+L+ +Y +
Sbjct: 51  AGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQD-GPLLLIVEYAK 109
Query: 446 NGSLDKWIFQCDG--------------SMMLSCEERIRVLKDVAAGVLYLHEGW----EK 487
            GSL  ++ +                 S +   +ER   + D+ +    + +G     E 
Sbjct: 110 YGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEM 169
Query: 488 KVLHRDIKSSNVLLDKEMNGRLGDFGLAR-MHGHGQVASTTRVVGTVGYLAPEVFSSGRA 546
           K++HRD+ + N+L+ +    ++ DFGL+R ++        ++    V ++A E       
Sbjct: 170 KLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIY 229
Query: 547 STQTDVFGFGILILEVLS-GRRPIEEGKPNLVEMVWELMVQGKXXXXXXXXXXXKGGFDE 605
           +TQ+DV+ FG+L+ E+++ G  P     P   E ++ L+  G                 +
Sbjct: 230 TTQSDVWSFGVLLWEIVTLGGNPYPGIPP---ERLFNLLKTGHRMER-----------PD 275
Query: 606 DEVERVLHLGLLCAYPDPRARPTMRQVVKVLE 637
           +  E +  L L C   +P  RP    + K LE
Sbjct: 276 NCSEEMYRLMLQCWKQEPDKRPVFADISKDLE 307

>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp Length = 285

Iteration: 1
 Score = 60.1 bits (144), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 44/172 (25%), Positives = 78/172 (45%), Gaps = 12/172 (6%)
Query: 400 ENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGS 459
           E  G       E+     L+H +++ L G+   +   + L+ +Y   G+    +++    
Sbjct: 52  EKAGVEHQLRREVEIQSHLRHPNILRLYGYF-HDATRVYLILEYAPLGT----VYRELQK 106
Query: 460 MMLSCEERIRV-LKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMH 518
           +    E+R    + ++A  + Y H    K+V+HRDIK  N+LL      ++ DFG +   
Sbjct: 107 LSKFDEQRTATYITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWS--- 160
Query: 519 GHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIE 570
            H   +  T + GT+ YL PE         + D++  G+L  E L G+ P E
Sbjct: 161 VHAPSSRRTTLCGTLDYLPPEXIEGRXHDEKVDLWSLGVLCYEFLVGKPPFE 212

>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With Ch5424802 Length = 344

Iteration: 1
 Score = 60.1 bits (144), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 50/185 (27%), Positives = 86/185 (46%), Gaps = 17/185 (9%)
Query: 391 EIAVK---RISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENG 447
           ++AVK    +  E D     FL E   + +  H+++V   G   +     +L+ + M  G
Sbjct: 79  QVAVKTLPEVCSEQD--ELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILL-ELMAGG 135
Query: 448 SLDKWIFQC----DGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDK 503
            L  ++ +          L+  + + V +D+A G  YL E      +HRDI + N LL  
Sbjct: 136 DLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEE---NHFIHRDIAARNCLLTC 192
Query: 504 EMNGR---LGDFGLAR-MHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILI 559
              GR   +GDFG+AR ++           +  V ++ PE F  G  +++TD + FG+L+
Sbjct: 193 PGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLL 252
Query: 560 LEVLS 564
            E+ S
Sbjct: 253 WEIFS 257

>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With Piperidine-Carboxamide Inhibitor 2 Length = 327

Iteration: 1
 Score = 60.1 bits (144), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 50/185 (27%), Positives = 86/185 (46%), Gaps = 17/185 (9%)
Query: 391 EIAVK---RISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENG 447
           ++AVK    +  E D     FL E   + +  H+++V   G   +     +L+ + M  G
Sbjct: 63  QVAVKTLPEVCSEQD--ELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILL-ELMAGG 119
Query: 448 SLDKWIFQC----DGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDK 503
            L  ++ +          L+  + + V +D+A G  YL E      +HRDI + N LL  
Sbjct: 120 DLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEE---NHFIHRDIAARNCLLTC 176
Query: 504 EMNGR---LGDFGLAR-MHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILI 559
              GR   +GDFG+AR ++           +  V ++ PE F  G  +++TD + FG+L+
Sbjct: 177 PGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLL 236
Query: 560 LEVLS 564
            E+ S
Sbjct: 237 WEIFS 241

>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone Inhibitor Length = 335

Iteration: 1
 Score = 60.1 bits (144), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 61/267 (22%), Positives = 117/267 (43%), Gaps = 41/267 (15%)
Query: 394 VKRISHENDGGTRAFLAEISSLGRL-KHKSLVGLRGWCKREKGSLMLVYDYMENGSLDKW 452
           +K  +H ++    A ++E+  +  L +H+++V L G C    G ++++ +Y   G L  +
Sbjct: 84  LKSTAHADE--KEALMSELKIMSHLGQHENIVNLLGACTH-GGPVLVITEYCCYGDLLNF 140
Query: 453 IFQC-------------DGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNV 499
           + +              +    LS  + +     VA G+ +L     K  +HRD+ + NV
Sbjct: 141 LRRKRPPGLEYSYNPSHNPEEQLSSRDLLHFSSQVAQGMAFLAS---KNCIHRDVAARNV 197
Query: 500 LLDKEMNGRLGDFGLAR--MHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGI 557
           LL      ++GDFGLAR  M+    +      +  V ++APE       + Q+DV+ +GI
Sbjct: 198 LLTNGHVAKIGDFGLARDIMNDSNYIVKGNARL-PVKWMAPESIFDCVYTVQSDVWSYGI 256
Query: 558 LILEVLS-GRRPIEEGKPNLV--EMVWELMVQGKXXXXXXXXXXXKGGFDEDEVERVLHL 614
           L+ E+ S G  P     P ++     ++L+  G            +  F    +  ++  
Sbjct: 257 LLWEIFSLGLNPY----PGILVNSKFYKLVKDG--------YQMAQPAFAPKNIYSIMQ- 303
Query: 615 GLLCAYPDPRARPTMRQVVKVLEGKIE 641
              C   +P  RPT +Q+   L+ + +
Sbjct: 304 --ACWALEPTHRPTFQQICSFLQEQAQ 328

>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex With Nvp- Tae684 Length = 315

Iteration: 1
 Score = 60.1 bits (144), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 50/185 (27%), Positives = 86/185 (46%), Gaps = 17/185 (9%)
Query: 391 EIAVK---RISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENG 447
           ++AVK    +  E D     FL E   + +  H+++V   G   +     +L+ + M  G
Sbjct: 54  QVAVKTLPEVCSEQD--ELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILL-ELMAGG 110
Query: 448 SLDKWIFQC----DGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDK 503
            L  ++ +          L+  + + V +D+A G  YL E      +HRDI + N LL  
Sbjct: 111 DLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEE---NHFIHRDIAARNCLLTC 167
Query: 504 EMNGR---LGDFGLAR-MHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILI 559
              GR   +GDFG+AR ++           +  V ++ PE F  G  +++TD + FG+L+
Sbjct: 168 PGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLL 227
Query: 560 LEVLS 564
            E+ S
Sbjct: 228 WEIFS 232

>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In Complex With Crizotinib Length = 327

Iteration: 1
 Score = 59.7 bits (143), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 50/185 (27%), Positives = 86/185 (46%), Gaps = 17/185 (9%)
Query: 391 EIAVK---RISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENG 447
           ++AVK    +  E D     FL E   + +  H+++V   G   +     +L+ + M  G
Sbjct: 62  QVAVKTLPEVCSEQD--ELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILM-ELMAGG 118
Query: 448 SLDKWIFQC----DGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDK 503
            L  ++ +          L+  + + V +D+A G  YL E      +HRDI + N LL  
Sbjct: 119 DLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEE---NHFIHRDIAARNCLLTC 175
Query: 504 EMNGR---LGDFGLAR-MHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILI 559
              GR   +GDFG+AR ++           +  V ++ PE F  G  +++TD + FG+L+
Sbjct: 176 PGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLL 235
Query: 560 LEVLS 564
            E+ S
Sbjct: 236 WEIFS 240

>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase Domain Length = 314

Iteration: 1
 Score = 59.7 bits (143), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 63/272 (23%), Positives = 121/272 (44%), Gaps = 36/272 (13%)
Query: 387 GGGAEIAVKRIS-HENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYME 445
            G   +AVK +  + +    R  L+E + L ++ H  ++ L G C ++ G L+L+ +Y +
Sbjct: 51  AGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQD-GPLLLIVEYAK 109
Query: 446 NGSLDKWIFQCDG--------------SMMLSCEERIRVLKDVAAGVLYLHEGW----EK 487
            GSL  ++ +                 S +   +ER   + D+ +    + +G     E 
Sbjct: 110 YGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEM 169
Query: 488 KVLHRDIKSSNVLLDKEMNGRLGDFGLAR-MHGHGQVASTTRVVGTVGYLAPEVFSSGRA 546
           K++HRD+ + N+L+ +    ++ DFGL+R ++        ++    V ++A E       
Sbjct: 170 KLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSXVKRSQGRIPVKWMAIESLFDHIY 229
Query: 547 STQTDVFGFGILILEVLS-GRRPIEEGKPNLVEMVWELMVQGKXXXXXXXXXXXKGGFDE 605
           +TQ+DV+ FG+L+ E+++ G  P     P   E ++ L+  G                 +
Sbjct: 230 TTQSDVWSFGVLLWEIVTLGGNPYPGIPP---ERLFNLLKTGHRMER-----------PD 275
Query: 606 DEVERVLHLGLLCAYPDPRARPTMRQVVKVLE 637
           +  E +  L L C   +P  RP    + K LE
Sbjct: 276 NCSEEMYRLMLQCWKQEPDKRPVFADISKDLE 307

>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With Acyliminobenzimidazole Inhibitor 1 Length = 353

Iteration: 1
 Score = 59.7 bits (143), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 50/185 (27%), Positives = 86/185 (46%), Gaps = 17/185 (9%)
Query: 391 EIAVK---RISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENG 447
           ++AVK    +  E D     FL E   + +  H+++V   G   +     +L+ + M  G
Sbjct: 89  QVAVKTLPEVCSEQD--ELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILL-ELMAGG 145
Query: 448 SLDKWIFQC----DGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDK 503
            L  ++ +          L+  + + V +D+A G  YL E      +HRDI + N LL  
Sbjct: 146 DLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTC 202
Query: 504 EMNGR---LGDFGLAR-MHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILI 559
              GR   +GDFG+AR ++           +  V ++ PE F  G  +++TD + FG+L+
Sbjct: 203 PGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLL 262
Query: 560 LEVLS 564
            E+ S
Sbjct: 263 WEIFS 267

>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel 4-amino-furo[2,3-d]pyrimidine Length = 316

Iteration: 1
 Score = 59.7 bits (143), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 50/192 (26%), Positives = 91/192 (47%), Gaps = 25/192 (13%)
Query: 392 IAVKRISHENDGGT----RAFLAEISSLGRLKHK-SLVGLRGWCKREKGSLMLVYDYMEN 446
           +AVK +    +G T    RA ++E+  L  + H  ++V L G C +  G LM++ ++ + 
Sbjct: 60  VAVKML---KEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKF 116
Query: 447 GSLDKWIFQCDGSMM-------------LSCEERIRVLKDVAAGVLYLHEGWEKKVLHRD 493
           G+L  ++       +             L+ E  I     VA G+ +L     +K +HRD
Sbjct: 117 GNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLAS---RKCIHRD 173
Query: 494 IKSSNVLLDKEMNGRLGDFGLAR-MHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDV 552
           + + N+LL ++   ++ DFGLAR +               + ++APE       + Q+DV
Sbjct: 174 LAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDV 233
Query: 553 FGFGILILEVLS 564
           + FG+L+ E+ S
Sbjct: 234 WSFGVLLWEIFS 245

>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a Resolution. Length = 322

Iteration: 1
 Score = 59.7 bits (143), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 55/263 (20%), Positives = 122/263 (46%), Gaps = 30/263 (11%)
Query: 392 IAVKRISHENDGGTR-AFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLD 450
           +A+K ++       R  FL E S +       +V L G   + + +L+++ + M  G L 
Sbjct: 58  VAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIM-ELMTRGDLK 116
Query: 451 KWIFQCDGSMM-------LSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDK 503
            ++     +M         S  + I++  ++A G+ YL+     K +HRD+ + N ++ +
Sbjct: 117 SYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAE 173
Query: 504 EMNGRLGDFGLAR-MHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEV 562
           +   ++GDFG+ R ++         + +  V +++PE    G  +T +DV+ FG+++ E+
Sbjct: 174 DFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 233
Query: 563 LSGRRPIEEGKPNLVEMVWELMVQGKXXXXXXXXXXXKGGFDEDE--VERVLHLGLLCAY 620
            +      +G  N  E V   +++G             G  D+ +   + +  L  +C  
Sbjct: 234 ATLAEQPYQGLSN--EQVLRFVMEG-------------GLLDKPDNCPDMLFELMRMCWQ 278
Query: 621 PDPRARPTMRQVVKVLEGKIEAG 643
            +P+ RP+  +++  ++ ++E G
Sbjct: 279 YNPKMRPSFLEIISSIKEEMEPG 301

>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1 Length = 327

Iteration: 1
 Score = 59.7 bits (143), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 42/159 (26%), Positives = 79/159 (49%), Gaps = 8/159 (5%)
Query: 410 AEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIR 469
           AE + L  +KH  +V L  +  +  G L L+ +Y+  G L     Q +   +   +    
Sbjct: 70  AERNILEEVKHPFIVDLI-YAFQTGGKLYLILEYLSGGEL---FMQLEREGIFMEDTACF 125
Query: 470 VLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRV 529
            L +++  + +LH+   K +++RD+K  N++L+ + + +L DFGL +   H     T   
Sbjct: 126 YLAEISMALGHLHQ---KGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTV-THXF 181
Query: 530 VGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRP 568
            GT+ Y+APE+      +   D +  G L+ ++L+G  P
Sbjct: 182 CGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPP 220

>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A Pentacyclic Inhibitor Length = 268

Iteration: 1
 Score = 59.7 bits (143), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 44/172 (25%), Positives = 78/172 (45%), Gaps = 12/172 (6%)
Query: 400 ENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGS 459
           E  G       E+     L+H +++ L G+   +   + L+ +Y   G+    +++    
Sbjct: 47  EKAGVEHQLRREVEIQSHLRHPNILRLYGYF-HDSTRVYLILEYAPLGT----VYRELQK 101
Query: 460 MMLSCEERIRV-LKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMH 518
           +    E+R    + ++A  + Y H    KKV+HRDIK  N+LL      ++ DFG +   
Sbjct: 102 LSKFDEQRTATYITELANALSYCHS---KKVIHRDIKPENLLLGSAGELKIADFGWS--- 155
Query: 519 GHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIE 570
            H   +    + GT+ YL PE+        + D++  G+L  E L G+ P E
Sbjct: 156 VHAPSSRRAALCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 207

>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Nicotinamide Inhibitor Length = 314

Iteration: 1
 Score = 59.7 bits (143), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 50/192 (26%), Positives = 91/192 (47%), Gaps = 25/192 (13%)
Query: 392 IAVKRISHENDGGT----RAFLAEISSLGRLKHK-SLVGLRGWCKREKGSLMLVYDYMEN 446
           +AVK +    +G T    RA ++E+  L  + H  ++V L G C +  G LM++ ++ + 
Sbjct: 51  VAVKML---KEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKF 107
Query: 447 GSLDKWIFQCDGSMM-------------LSCEERIRVLKDVAAGVLYLHEGWEKKVLHRD 493
           G+L  ++       +             L+ E  I     VA G+ +L     +K +HRD
Sbjct: 108 GNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLAS---RKCIHRD 164
Query: 494 IKSSNVLLDKEMNGRLGDFGLAR-MHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDV 552
           + + N+LL ++   ++ DFGLAR +               + ++APE       + Q+DV
Sbjct: 165 LAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDV 224
Query: 553 FGFGILILEVLS 564
           + FG+L+ E+ S
Sbjct: 225 WSFGVLLWEIFS 236

>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Pyridinyl-Triazine Inhibitor Length = 314

Iteration: 1
 Score = 59.7 bits (143), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 50/192 (26%), Positives = 91/192 (47%), Gaps = 25/192 (13%)
Query: 392 IAVKRISHENDGGT----RAFLAEISSLGRLKHK-SLVGLRGWCKREKGSLMLVYDYMEN 446
           +AVK +    +G T    RA ++E+  L  + H  ++V L G C +  G LM++ ++ + 
Sbjct: 51  VAVKML---KEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKF 107
Query: 447 GSLDKWIFQCDGSMM-------------LSCEERIRVLKDVAAGVLYLHEGWEKKVLHRD 493
           G+L  ++       +             L+ E  I     VA G+ +L     +K +HRD
Sbjct: 108 GNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLAS---RKCIHRD 164
Query: 494 IKSSNVLLDKEMNGRLGDFGLAR-MHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDV 552
           + + N+LL ++   ++ DFGLAR +               + ++APE       + Q+DV
Sbjct: 165 LAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDV 224
Query: 553 FGFGILILEVLS 564
           + FG+L+ E+ S
Sbjct: 225 WSFGVLLWEIFS 236

>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase Domain Complexed With Amp-Pnp Length = 327

Iteration: 1
 Score = 59.3 bits (142), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 35/88 (39%), Positives = 52/88 (59%), Gaps = 12/88 (13%)
Query: 488 KVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVAST---TRVVGTVGYLAPEVF--S 542
           K++HRDIK SN+LLD+  N +L DFG++     GQ+  +   TR  G   Y+APE    S
Sbjct: 146 KIIHRDIKPSNILLDRSGNIKLCDFGIS-----GQLVDSIAKTRDAGCRPYMAPERIDPS 200
Query: 543 SGRA--STQTDVFGFGILILEVLSGRRP 568
           + R     ++DV+  GI + E+ +GR P
Sbjct: 201 ASRQGYDVRSDVWSLGITLYELATGRFP 228

>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage Checkpoint Kinase Length = 443

Iteration: 1
 Score = 59.3 bits (142), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 56/192 (29%), Positives = 84/192 (43%), Gaps = 31/192 (16%)
Query: 410 AEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSL-DKWIFQCDGSMMLSCEERI 468
            EI  L +L H  ++ ++ +   E     +V + ME G L DK +    G+  L      
Sbjct: 203 TEIEILKKLNHPCIIKIKNFFDAE--DYYIVLELMEGGELFDKVV----GNKRLKEATCK 256
Query: 469 RVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNG---RLGDFGLARMHGHGQVAS 525
                +   V YLHE     ++HRD+K  NVLL  +      ++ DFG +++ G   +  
Sbjct: 257 LYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMR 313
Query: 526 TTRVVGTVGYLAPEVF-SSGRA--STQTDVFGFGILILEVLSGRRPIEE----------- 571
           T  + GT  YLAPEV  S G A  +   D +  G+++   LSG  P  E           
Sbjct: 314 T--LCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQI 371
Query: 572 --GKPNLVEMVW 581
             GK N +  VW
Sbjct: 372 TSGKYNFIPEVW 383

>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage Checkpoint Kinase Length = 419

Iteration: 1
 Score = 59.3 bits (142), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 56/192 (29%), Positives = 84/192 (43%), Gaps = 31/192 (16%)
Query: 410 AEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSL-DKWIFQCDGSMMLSCEERI 468
            EI  L +L H  ++ ++ +   E     +V + ME G L DK +    G+  L      
Sbjct: 189 TEIEILKKLNHPCIIKIKNFFDAE--DYYIVLELMEGGELFDKVV----GNKRLKEATCK 242
Query: 469 RVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNG---RLGDFGLARMHGHGQVAS 525
                +   V YLHE     ++HRD+K  NVLL  +      ++ DFG +++ G   +  
Sbjct: 243 LYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMR 299
Query: 526 TTRVVGTVGYLAPEVF-SSGRA--STQTDVFGFGILILEVLSGRRPIEE----------- 571
           T  + GT  YLAPEV  S G A  +   D +  G+++   LSG  P  E           
Sbjct: 300 T--LCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQI 357
Query: 572 --GKPNLVEMVW 581
             GK N +  VW
Sbjct: 358 TSGKYNFIPEVW 369

>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A Resolution Length = 336

Iteration: 1
 Score = 59.3 bits (142), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 43/146 (29%), Positives = 69/146 (47%), Gaps = 24/146 (16%)
Query: 438 MLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLH------EGWEKKVLH 491
           +LV +Y  NGSL K++       + SC    R+   V  G+ YLH      + ++  + H
Sbjct: 88  LLVMEYYPNGSLXKYLSLHTSDWVSSC----RLAHSVTRGLAYLHTELPRGDHYKPAISH 143
Query: 492 RDIKSSNVLLDKEMNGRLGDFGLA-RMHGHGQVA------STTRVVGTVGYLAPEVFSSG 544
           RD+ S NVL+  +    + DFGL+ R+ G+  V       +    VGT+ Y+APEV    
Sbjct: 144 RDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGA 203
Query: 545 -------RASTQTDVFGFGILILEVL 563
                   A  Q D++  G++  E+ 
Sbjct: 204 VNLRDXESALKQVDMYALGLIYWEIF 229

>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1 Length = 304

Iteration: 1
 Score = 59.3 bits (142), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 55/263 (20%), Positives = 122/263 (46%), Gaps = 30/263 (11%)
Query: 392 IAVKRISHENDGGTR-AFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLD 450
           +A+K ++       R  FL E S +       +V L G   + + +L+++ + M  G L 
Sbjct: 48  VAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIM-ELMTRGDLK 106
Query: 451 KWIFQCDGSMM-------LSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDK 503
            ++     +M         S  + I++  ++A G+ YL+     K +HRD+ + N ++ +
Sbjct: 107 SYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAE 163
Query: 504 EMNGRLGDFGLAR-MHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEV 562
           +   ++GDFG+ R ++         + +  V +++PE    G  +T +DV+ FG+++ E+
Sbjct: 164 DFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 223
Query: 563 LSGRRPIEEGKPNLVEMVWELMVQGKXXXXXXXXXXXKGGFDEDE--VERVLHLGLLCAY 620
            +      +G  N  E V   +++G             G  D+ +   + +  L  +C  
Sbjct: 224 ATLAEQPYQGLSN--EQVLRFVMEG-------------GLLDKPDNCPDMLFELMRMCWQ 268
Query: 621 PDPRARPTMRQVVKVLEGKIEAG 643
            +P+ RP+  +++  ++ ++E G
Sbjct: 269 YNPKMRPSFLEIISSIKEEMEPG 291

>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure Length = 285

Iteration: 1
 Score = 59.3 bits (142), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 42/171 (24%), Positives = 75/171 (43%), Gaps = 10/171 (5%)
Query: 400 ENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGS 459
           E  G       E+     L+H +++ L G+   +   + L+ +Y   G + K + +    
Sbjct: 52  EKAGVEHQLRREVEIQSHLRHPNILRLYGYF-HDATRVYLILEYAPRGEVYKELQKLSK- 109
Query: 460 MMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHG 519
                +     + ++A  + Y H    K+V+HRDIK  N+LL      ++ DFG +    
Sbjct: 110 --FDEQRTATYITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWS---V 161
Query: 520 HGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIE 570
           H   +    + GT+ YL PE+        + D++  G+L  E L G+ P E
Sbjct: 162 HAPSSRRXXLXGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 212

>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form Length = 351

Iteration: 1
 Score = 59.3 bits (142), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 51/182 (28%), Positives = 87/182 (47%), Gaps = 13/182 (7%)
Query: 411 EISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLD-KWIFQCDGSMMLSCEERIR 469
           E S    LKH  +V L      + G L +V+++M+   L  + + + D   + S      
Sbjct: 76  EASICHMLKHPHIVELLETYSSD-GMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASH 134
Query: 470 VLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNG---RLGDFGLARMHGHGQVAST 526
            ++ +   + Y H+     ++HRD+K   VLL  + N    +LG FG+A   G   + + 
Sbjct: 135 YMRQILEALRYCHDN---NIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAG 191
Query: 527 TRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQ 586
            RV GT  ++APEV          DV+G G+++  +LSG  P    K    E ++E +++
Sbjct: 192 GRV-GTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTK----ERLFEGIIK 246
Query: 587 GK 588
           GK
Sbjct: 247 GK 248

>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From The Structures Cdk6-P19ink4d Inhibitor Complex Length = 326

Iteration: 1
 Score = 58.9 bits (141), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 55/205 (26%), Positives = 107/205 (52%), Gaps = 19/205 (9%)
Query: 385 LEGGGAEIAVKRISHEN--DGGTRAFLAEISSLGRLK---HKSLVGLRGWCKREKGS--- 436
           L+ GG  +A+KR+  +   +G   + + E++ L  L+   H ++V L   C   +     
Sbjct: 33  LKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRET 92
Query: 437 -LMLVYDYMENGSLDKWIFQCDGSMMLSCEERIR-VLKDVAAGVLYLHEGWEKKVLHRDI 494
            L LV+++++   L  ++ +     + +  E I+ ++  +  G+ +LH     +V+HRD+
Sbjct: 93  KLTLVFEHVDQ-DLTTYLDKVPEPGVPT--ETIKDMMFQLLRGLDFLHS---HRVVHRDL 146
Query: 495 KSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFG 554
           K  N+L+      +L DFGLAR++   Q+A T+ VV T+ Y APEV      +T  D++ 
Sbjct: 147 KPQNILVTSSGQIKLADFGLARIYSF-QMALTS-VVVTLWYRAPEVLLQSSYATPVDLWS 204
Query: 555 FGILILEVLSGRRPIEEGKPNLVEM 579
            G +  E+   R+P+  G  ++ ++
Sbjct: 205 VGCIFAEMFR-RKPLFRGSSDVDQL 228

>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor Length = 307

Iteration: 1
 Score = 58.9 bits (141), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 55/205 (26%), Positives = 107/205 (52%), Gaps = 19/205 (9%)
Query: 385 LEGGGAEIAVKRISHEN--DGGTRAFLAEISSLGRLK---HKSLVGLRGWCKREKGS--- 436
           L+ GG  +A+KR+  +   +G   + + E++ L  L+   H ++V L   C   +     
Sbjct: 33  LKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRET 92
Query: 437 -LMLVYDYMENGSLDKWIFQCDGSMMLSCEERIR-VLKDVAAGVLYLHEGWEKKVLHRDI 494
            L LV+++++   L  ++ +     + +  E I+ ++  +  G+ +LH     +V+HRD+
Sbjct: 93  KLTLVFEHVDQ-DLTTYLDKVPEPGVPT--ETIKDMMFQLLRGLDFLHS---HRVVHRDL 146
Query: 495 KSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFG 554
           K  N+L+      +L DFGLAR++   Q+A T+ VV T+ Y APEV      +T  D++ 
Sbjct: 147 KPQNILVTSSGQIKLADFGLARIYSF-QMALTS-VVVTLWYRAPEVLLQSSYATPVDLWS 204
Query: 555 FGILILEVLSGRRPIEEGKPNLVEM 579
            G +  E+   R+P+  G  ++ ++
Sbjct: 205 VGCIFAEMFR-RKPLFRGSSDVDQL 228

>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase Domain (2p) In Complex With A Bis-Azaindole Inhibitor Length = 336

Iteration: 1
 Score = 58.9 bits (141), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 55/263 (20%), Positives = 121/263 (46%), Gaps = 30/263 (11%)
Query: 392 IAVKRISHENDGGTR-AFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLD 450
           +A+K ++       R  FL E S +       +V L G   + + +L+++ + M  G L 
Sbjct: 80  VAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIM-ELMTRGDLK 138
Query: 451 KWIFQCDGSMM-------LSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDK 503
            ++      M         S  + I++  ++A G+ YL+     K +HRD+ + N ++ +
Sbjct: 139 SYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAE 195
Query: 504 EMNGRLGDFGLAR-MHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEV 562
           +   ++GDFG+ R ++         + +  V +++PE    G  +T +DV+ FG+++ E+
Sbjct: 196 DFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 255
Query: 563 LSGRRPIEEGKPNLVEMVWELMVQGKXXXXXXXXXXXKGGFDEDE--VERVLHLGLLCAY 620
            +      +G  N  E V   +++G             G  D+ +   + +  L  +C  
Sbjct: 256 ATLAEQPYQGLSN--EQVLRFVMEG-------------GLLDKPDNCPDMLFELMRMCWQ 300
Query: 621 PDPRARPTMRQVVKVLEGKIEAG 643
            +P+ RP+  +++  ++ ++E G
Sbjct: 301 YNPKMRPSFLEIISSIKEEMEPG 323

>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX Length = 361

Iteration: 1
 Score = 58.9 bits (141), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 51/182 (28%), Positives = 87/182 (47%), Gaps = 13/182 (7%)
Query: 411 EISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLD-KWIFQCDGSMMLSCEERIR 469
           E S    LKH  +V L      + G L +V+++M+   L  + + + D   + S      
Sbjct: 78  EASICHMLKHPHIVELLETYSSD-GMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASH 136
Query: 470 VLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNG---RLGDFGLARMHGHGQVAST 526
            ++ +   + Y H+     ++HRD+K   VLL  + N    +LG FG+A   G   + + 
Sbjct: 137 YMRQILEALRYCHDN---NIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAG 193
Query: 527 TRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQ 586
            RV GT  ++APEV          DV+G G+++  +LSG  P    K    E ++E +++
Sbjct: 194 GRV-GTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTK----ERLFEGIIK 248
Query: 587 GK 588
           GK
Sbjct: 249 GK 250

>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240->arg, Met302- >leu) In Complex With 1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]- Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea Length = 272

Iteration: 1
 Score = 58.9 bits (141), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 44/172 (25%), Positives = 78/172 (45%), Gaps = 12/172 (6%)
Query: 400 ENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGS 459
           E  G       E+     L+H +++ L G+   +   + L+ +Y   G+    +++    
Sbjct: 51  EKAGVEHQLRREVEIQSHLRHPNILRLYGYF-HDATRVYLILEYAPLGT----VYRELQK 105
Query: 460 MMLSCEERIRV-LKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMH 518
           +    E+R    + ++A  + Y H    K+V+HRDIK  N+LL      ++ DFG +   
Sbjct: 106 LSRFDEQRTATYITELANALSYCHS---KRVIHRDIKPENLLLGSNGELKIADFGWS--- 159
Query: 519 GHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIE 570
            H   +  T + GT+ YL PE+        + D++  G+L  E L G  P E
Sbjct: 160 VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGMPPFE 211

>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine Inhibitor Length = 272

Iteration: 1
 Score = 58.5 bits (140), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 43/172 (25%), Positives = 79/172 (45%), Gaps = 12/172 (6%)
Query: 400 ENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGS 459
           E  G       E+     L+H +++ L G+   +   + L+ +Y   G+    +++    
Sbjct: 50  EKAGVEHQLRREVEIQSHLRHPNILRLYGYF-HDATRVYLILEYAPLGT----VYRELQK 104
Query: 460 MMLSCEERIRV-LKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMH 518
           +    E+R    + ++A  + Y H    K+V+HRDIK  N+LL      ++ +FG +   
Sbjct: 105 LSKFDEQRTATYITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIANFGWS--- 158
Query: 519 GHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIE 570
            H   +  T + GT+ YL PE+        + D++  G+L  E L G+ P E
Sbjct: 159 VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 210

>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth Factor-1 Receptor Kinase Domain Length = 322

Iteration: 1
 Score = 58.5 bits (140), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 55/263 (20%), Positives = 121/263 (46%), Gaps = 30/263 (11%)
Query: 392 IAVKRISHENDGGTR-AFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLD 450
           +A+K ++       R  FL E S +       +V L G   + + +L+++ + M  G L 
Sbjct: 58  VAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIM-ELMTRGDLK 116
Query: 451 KWIFQCDGSMM-------LSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDK 503
            ++      M         S  + I++  ++A G+ YL+     K +HRD+ + N ++ +
Sbjct: 117 SYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAE 173
Query: 504 EMNGRLGDFGLAR-MHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEV 562
           +   ++GDFG+ R ++         + +  V +++PE    G  +T +DV+ FG+++ E+
Sbjct: 174 DFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 233
Query: 563 LSGRRPIEEGKPNLVEMVWELMVQGKXXXXXXXXXXXKGGFDEDE--VERVLHLGLLCAY 620
            +      +G  N  E V   +++G             G  D+ +   + +  L  +C  
Sbjct: 234 ATLAEQPYQGLSN--EQVLRFVMEG-------------GLLDKPDNCPDMLFELMRMCWQ 278
Query: 621 PDPRARPTMRQVVKVLEGKIEAG 643
            +P+ RP+  +++  ++ ++E G
Sbjct: 279 YNPKMRPSFLEIISSIKEEMEPG 301

>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase Length = 353

Iteration: 1
 Score = 58.5 bits (140), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 61/208 (29%), Positives = 102/208 (49%), Gaps = 22/208 (10%)
Query: 388 GGAEIAVKRISHENDG---GTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYM 444
            G ++A+K++S          RA+  E+  L  ++H++++GL         SL   YD+ 
Sbjct: 48  SGEKVAIKKLSRPFQSEIFAKRAY-RELLLLKHMQHENVIGLLD-VFTPASSLRNFYDFY 105
Query: 445 ENGSLDKWIFQCDGSMMLS---CEERIRVL-KDVAAGVLYLHEGWEKKVLHRDIKSSNVL 500
               L     Q D   ++     EE+I+ L   +  G+ Y+H      V+HRD+K  N+ 
Sbjct: 106 ----LVMPFMQTDLQKIMGLKFSEEKIQYLVYQMLKGLKYIHSA---GVVHRDLKPGNLA 158
Query: 501 LDKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQT-DVFGFGILI 559
           ++++   ++ DFGLAR   H     T  VV T  Y APEV  S     QT D++  G ++
Sbjct: 159 VNEDCELKILDFGLAR---HADAEMTGYVV-TRWYRAPEVILSWMHYNQTVDIWSVGCIM 214
Query: 560 LEVLSGRRPIEEGKPNLVEMVWELMVQG 587
            E+L+G+  + +GK  L ++   L V G
Sbjct: 215 AEMLTGKT-LFKGKDYLDQLTQILKVTG 241

>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In Complex With Inhibitor Pv1533 Length = 322

Iteration: 1
 Score = 58.5 bits (140), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 56/191 (29%), Positives = 84/191 (43%), Gaps = 31/191 (16%)
Query: 411 EISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSL-DKWIFQCDGSMMLSCEERIR 469
           EI  L +L H  ++ ++ +   E     +V + ME G L DK +    G+  L       
Sbjct: 64  EIEILKKLNHPCIIKIKNFFDAE--DYYIVLELMEGGELFDKVV----GNKRLKEATCKL 117
Query: 470 VLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNG---RLGDFGLARMHGHGQVAST 526
               +   V YLHE     ++HRD+K  NVLL  +      ++ DFG +++ G   +  T
Sbjct: 118 YFYQMLLAVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRT 174
Query: 527 TRVVGTVGYLAPEVF-SSGRA--STQTDVFGFGILILEVLSGRRPIEE------------ 571
             + GT  YLAPEV  S G A  +   D +  G+++   LSG  P  E            
Sbjct: 175 --LCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQIT 232
Query: 572 -GKPNLVEMVW 581
            GK N +  VW
Sbjct: 233 SGKYNFIPEVW 243

>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine Length = 268

Iteration: 1
 Score = 58.5 bits (140), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 43/172 (25%), Positives = 78/172 (45%), Gaps = 12/172 (6%)
Query: 400 ENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGS 459
           E  G       E+     L+H +++ L G+   +   + L+ +Y   G+    +++    
Sbjct: 47  EKAGVEHQLRREVEIQSHLRHPNILRLYGYF-HDATRVYLILEYAPLGT----VYRELQK 101
Query: 460 MMLSCEERIRV-LKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMH 518
           +    E+R    + ++A  + Y H    K+V+HRDIK  N+LL      ++ DFG +   
Sbjct: 102 LSKFDEQRTATYITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWS--- 155
Query: 519 GHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIE 570
            H   +    + GT+ YL PE+        + D++  G+L  E L G+ P E
Sbjct: 156 VHAPSSRRAALCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 207

>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632 Length = 306

Iteration: 1
 Score = 58.5 bits (140), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 43/172 (25%), Positives = 78/172 (45%), Gaps = 12/172 (6%)
Query: 400 ENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGS 459
           E  G       E+     L+H +++ L G+   +   + L+ +Y   G+    +++    
Sbjct: 73  EKAGVEHQLRREVEIQSHLRHPNILRLYGYF-HDATRVYLILEYAPLGT----VYRELQK 127
Query: 460 MMLSCEERIRV-LKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMH 518
           +    E+R    + ++A  + Y H    K+V+HRDIK  N+LL      ++ DFG +   
Sbjct: 128 LSKFDEQRTATYITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWS--- 181
Query: 519 GHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIE 570
            H   +    + GT+ YL PE+        + D++  G+L  E L G+ P E
Sbjct: 182 VHAPSSRRDDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 233

>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a Length = 282

Iteration: 1
 Score = 58.5 bits (140), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 43/172 (25%), Positives = 79/172 (45%), Gaps = 12/172 (6%)
Query: 400 ENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGS 459
           E  G       E+     L+H +++ L G+   +   + L+ +Y   G+    +++    
Sbjct: 49  EKAGVEHQLRREVEIQSHLRHPNILRLYGYF-HDATRVYLILEYAPLGT----VYRELQK 103
Query: 460 MMLSCEERIRV-LKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMH 518
           +    E+R    + ++A  + Y H    K+V+HRDIK  N+LL      ++ +FG +   
Sbjct: 104 LSKFDEQRTATYITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIANFGWS--- 157
Query: 519 GHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIE 570
            H   +  T + GT+ YL PE+        + D++  G+L  E L G+ P E
Sbjct: 158 VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 209

>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral Cyclin Length = 308

Iteration: 1
 Score = 58.5 bits (140), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 55/205 (26%), Positives = 107/205 (52%), Gaps = 19/205 (9%)
Query: 385 LEGGGAEIAVKRISHEN--DGGTRAFLAEISSLGRLK---HKSLVGLRGWCKREKGS--- 436
           L+ GG  +A+KR+  +   +G   + + E++ L  L+   H ++V L   C   +     
Sbjct: 33  LKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRET 92
Query: 437 -LMLVYDYMENGSLDKWIFQCDGSMMLSCEERIR-VLKDVAAGVLYLHEGWEKKVLHRDI 494
            L LV+++++   L  ++ +     + +  E I+ ++  +  G+ +LH     +V+HRD+
Sbjct: 93  KLTLVFEHVDQ-DLTTYLDKVPEPGVPT--ETIKDMMFQLLRGLDFLHS---HRVVHRDL 146
Query: 495 KSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFG 554
           K  N+L+      +L DFGLAR++   Q+A T+ VV T+ Y APEV      +T  D++ 
Sbjct: 147 KPQNILVTSSGQIKLADFGLARIYSF-QMALTS-VVVTLWYRAPEVLLQSSYATPVDLWS 204
Query: 555 FGILILEVLSGRRPIEEGKPNLVEM 579
            G +  E+   R+P+  G  ++ ++
Sbjct: 205 VGCIFAEMFR-RKPLFRGSSDVDQL 228

>pdb|4EXU|A Chain A, Mapk13, Inactive Form Length = 371

Iteration: 1
 Score = 58.5 bits (140), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 61/205 (29%), Positives = 101/205 (49%), Gaps = 16/205 (7%)
Query: 388 GGAEIAVKRISHENDG---GTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYM 444
            G ++A+K++S          RA+  E+  L  ++H++++GL         SL   YD+ 
Sbjct: 66  SGEKVAIKKLSRPFQSEIFAKRAY-RELLLLKHMQHENVIGLLD-VFTPASSLRNFYDFY 123
Query: 445 ENGSLDKWIFQCDGSMMLSCEERIRVL-KDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDK 503
                 +   Q    M  S EE+I+ L   +  G+ Y+H      V+HRD+K  N+ +++
Sbjct: 124 LVMPFMQTDLQKIMGMEFS-EEKIQYLVYQMLKGLKYIHSA---GVVHRDLKPGNLAVNE 179
Query: 504 EMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQT-DVFGFGILILEV 562
           +   ++ DFGLAR   H     T  VV T  Y APEV  S     QT D++  G ++ E+
Sbjct: 180 DCELKILDFGLAR---HADAEMTGYVV-TRWYRAPEVILSWMHYNQTVDIWSVGCIMAEM 235
Query: 563 LSGRRPIEEGKPNLVEMVWELMVQG 587
           L+G+  + +GK  L ++   L V G
Sbjct: 236 LTGKT-LFKGKDYLDQLTQILKVTG 259

>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And Compound 10 Length = 268

Iteration: 1
 Score = 58.5 bits (140), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 43/172 (25%), Positives = 78/172 (45%), Gaps = 12/172 (6%)
Query: 400 ENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGS 459
           E  G       E+     L+H +++ L G+   +   + L+ +Y   G+    +++    
Sbjct: 47  EKAGVEHQLRREVEIQSHLRHPNILRLYGYF-HDATRVYLILEYAPLGT----VYRELQK 101
Query: 460 MMLSCEERIRV-LKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMH 518
           +    E+R    + ++A  + Y H    K+V+HRDIK  N+LL      ++ DFG +   
Sbjct: 102 LSKFDEQRTATYITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWS--- 155
Query: 519 GHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIE 570
            H   +    + GT+ YL PE+        + D++  G+L  E L G+ P E
Sbjct: 156 VHAPSSRRXXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 207

>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A Specific Inhibitor Length = 323

Iteration: 1
 Score = 58.5 bits (140), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 56/191 (29%), Positives = 84/191 (43%), Gaps = 31/191 (16%)
Query: 411 EISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSL-DKWIFQCDGSMMLSCEERIR 469
           EI  L +L H  ++ ++ +   E     +V + ME G L DK +    G+  L       
Sbjct: 65  EIEILKKLNHPCIIKIKNFFDAE--DYYIVLELMEGGELFDKVV----GNKRLKEATCKL 118
Query: 470 VLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNG---RLGDFGLARMHGHGQVAST 526
               +   V YLHE     ++HRD+K  NVLL  +      ++ DFG +++ G   +  T
Sbjct: 119 YFYQMLLAVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRT 175
Query: 527 TRVVGTVGYLAPEVF-SSGRA--STQTDVFGFGILILEVLSGRRPIEE------------ 571
             + GT  YLAPEV  S G A  +   D +  G+++   LSG  P  E            
Sbjct: 176 --LCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQIT 233
Query: 572 -GKPNLVEMVW 581
            GK N +  VW
Sbjct: 234 SGKYNFIPEVW 244

>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With Inhibitor Pv976 Length = 323

Iteration: 1
 Score = 58.5 bits (140), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 56/191 (29%), Positives = 84/191 (43%), Gaps = 31/191 (16%)
Query: 411 EISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSL-DKWIFQCDGSMMLSCEERIR 469
           EI  L +L H  ++ ++ +   E     +V + ME G L DK +    G+  L       
Sbjct: 65  EIEILKKLNHPCIIKIKNFFDAE--DYYIVLELMEGGELFDKVV----GNKRLKEATCKL 118
Query: 470 VLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNG---RLGDFGLARMHGHGQVAST 526
               +   V YLHE     ++HRD+K  NVLL  +      ++ DFG +++ G   +  T
Sbjct: 119 YFYQMLLAVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRT 175
Query: 527 TRVVGTVGYLAPEVF-SSGRA--STQTDVFGFGILILEVLSGRRPIEE------------ 571
             + GT  YLAPEV  S G A  +   D +  G+++   LSG  P  E            
Sbjct: 176 --LCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQIT 233
Query: 572 -GKPNLVEMVW 581
            GK N +  VW
Sbjct: 234 SGKYNFIPEVW 244

>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With Inhibitor Pv1531 Length = 322

Iteration: 1
 Score = 58.2 bits (139), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 56/191 (29%), Positives = 84/191 (43%), Gaps = 31/191 (16%)
Query: 411 EISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSL-DKWIFQCDGSMMLSCEERIR 469
           EI  L +L H  ++ ++ +   E     +V + ME G L DK +    G+  L       
Sbjct: 65  EIEILKKLNHPCIIKIKNFFDAE--DYYIVLELMEGGELFDKVV----GNKRLKEATCKL 118
Query: 470 VLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNG---RLGDFGLARMHGHGQVAST 526
               +   V YLHE     ++HRD+K  NVLL  +      ++ DFG +++ G   +  T
Sbjct: 119 YFYQMLLAVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRT 175
Query: 527 TRVVGTVGYLAPEVF-SSGRA--STQTDVFGFGILILEVLSGRRPIEE------------ 571
             + GT  YLAPEV  S G A  +   D +  G+++   LSG  P  E            
Sbjct: 176 --LCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQIT 233
Query: 572 -GKPNLVEMVW 581
            GK N +  VW
Sbjct: 234 SGKYNFIPEVW 244

>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287, Thr288 And Bound To Tpx2 1-43 Length = 282

Iteration: 1
 Score = 58.2 bits (139), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 43/172 (25%), Positives = 78/172 (45%), Gaps = 12/172 (6%)
Query: 400 ENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGS 459
           E  G       E+     L+H +++ L G+   +   + L+ +Y   G+    +++    
Sbjct: 49  EKAGVEHQLRREVEIQSHLRHPNILRLYGYF-HDATRVYLILEYAPLGT----VYRELQK 103
Query: 460 MMLSCEERIRV-LKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMH 518
           +    E+R    + ++A  + Y H    K+V+HRDIK  N+LL      ++ DFG +   
Sbjct: 104 LSKFDEQRTATYITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWS--- 157
Query: 519 GHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIE 570
            H   +    + GT+ YL PE+        + D++  G+L  E L G+ P E
Sbjct: 158 VHAPSSRRXXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 209

>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase Domain Of Csf-1r Length = 324

Iteration: 1
 Score = 58.2 bits (139), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 61/274 (22%), Positives = 118/274 (43%), Gaps = 48/274 (17%)
Query: 394 VKRISHENDGGTRAFLAEISSLGRL-KHKSLVGLRGWCKREKGSLMLVYDYMENGSLDKW 452
           +K  +H ++    A ++E+  +  L +H+++V L G C    G ++++ +Y   G L  +
Sbjct: 69  LKSTAHADE--KEALMSELKIMSHLGQHENIVNLLGACTH-GGPVLVITEYCCYGDLLNF 125
Query: 453 IFQCDGSMM--------------------LSCEERIRVLKDVAAGVLYLHEGWEKKVLHR 492
           + +   +M+                    L   + +     VA G+ +L     K  +HR
Sbjct: 126 LRRKAEAMLGPSLAPGQDPEGLDKEDGRPLELRDLLHFSSQVAQGMAFLAS---KNCIHR 182
Query: 493 DIKSSNVLLDKEMNGRLGDFGLAR--MHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQT 550
           D+ + NVLL      ++GDFGLAR  M+    +      +  V ++APE       + Q+
Sbjct: 183 DVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARL-PVKWMAPESIFDCVYTVQS 241
Query: 551 DVFGFGILILEVLS-GRRPIEEGKPNLV--EMVWELMVQGKXXXXXXXXXXXKGGFDEDE 607
           DV+ +GIL+ E+ S G  P     P ++     ++L+  G            +  F    
Sbjct: 242 DVWSYGILLWEIFSLGLNPY----PGILVNSKFYKLVKDG--------YQMAQPAFAPKN 289
Query: 608 VERVLHLGLLCAYPDPRARPTMRQVVKVLEGKIE 641
           +  ++     C   +P  RPT +Q+   L+ + +
Sbjct: 290 IYSIMQ---ACWALEPTHRPTFQQICSFLQEQAQ 320

>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 275

Iteration: 1
 Score = 58.2 bits (139), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 43/172 (25%), Positives = 78/172 (45%), Gaps = 12/172 (6%)
Query: 400 ENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGS 459
           E  G       E+     L+H +++ L G+   +   + L+ +Y   G+    +++    
Sbjct: 50  EKAGVEHQLRREVEIQSHLRHPNILRLYGYF-HDATRVYLILEYAPLGT----VYRELQK 104
Query: 460 MMLSCEERIRV-LKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMH 518
           +    E+R    + ++A  + Y H    K+V+HRDIK  N+LL      ++ DFG +   
Sbjct: 105 LSKFDEQRTATYITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWS--- 158
Query: 519 GHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIE 570
            H   +    + GT+ YL PE+        + D++  G+L  E L G+ P E
Sbjct: 159 VHAPSSRRXXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 210

>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp Length = 329

Iteration: 1
 Score = 58.2 bits (139), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 56/191 (29%), Positives = 84/191 (43%), Gaps = 31/191 (16%)
Query: 411 EISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSL-DKWIFQCDGSMMLSCEERIR 469
           EI  L +L H  ++ ++ +   E     +V + ME G L DK +    G+  L       
Sbjct: 71  EIEILKKLNHPCIIKIKNFFDAE--DYYIVLELMEGGELFDKVV----GNKRLKEATCKL 124
Query: 470 VLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNG---RLGDFGLARMHGHGQVAST 526
               +   V YLHE     ++HRD+K  NVLL  +      ++ DFG +++ G   +  T
Sbjct: 125 YFYQMLLAVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRT 181
Query: 527 TRVVGTVGYLAPEVF-SSGRA--STQTDVFGFGILILEVLSGRRPIEE------------ 571
             + GT  YLAPEV  S G A  +   D +  G+++   LSG  P  E            
Sbjct: 182 --LCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQIT 239
Query: 572 -GKPNLVEMVW 581
            GK N +  VW
Sbjct: 240 SGKYNFIPEVW 250

>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma Kinase Catalytic Domain Length = 327

Iteration: 1
 Score = 58.2 bits (139), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/185 (26%), Positives = 86/185 (46%), Gaps = 17/185 (9%)
Query: 391 EIAVK---RISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENG 447
           ++AVK    +  E D     FL E   + +  H+++V   G   +     +L+ + M  G
Sbjct: 63  QVAVKTLPEVCSEQD--ELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILL-ELMAGG 119
Query: 448 SLDKWIFQC----DGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDK 503
            L  ++ +          L+  + + V +D+A G  YL E      +HRDI + N LL  
Sbjct: 120 DLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEE---NHFIHRDIAARNCLLTC 176
Query: 504 EMNGR---LGDFGLAR-MHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILI 559
              GR   +GDFG+A+ ++           +  V ++ PE F  G  +++TD + FG+L+
Sbjct: 177 PGPGRVAKIGDFGMAQDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLL 236
Query: 560 LEVLS 564
            E+ S
Sbjct: 237 WEIFS 241

>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor (Igf-1r-Wt) Complex With Bms-754807 [1-(4-((5-Cyclopropyl- 1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2, 4]triazin-2-Yl)-N- (6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide] Length = 315

Iteration: 1
 Score = 58.2 bits (139), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 55/263 (20%), Positives = 121/263 (46%), Gaps = 30/263 (11%)
Query: 392 IAVKRISHENDGGTR-AFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLD 450
           +A+K ++       R  FL E S +       +V L G   + + +L+++ + M  G L 
Sbjct: 51  VAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIM-ELMTRGDLK 109
Query: 451 KWIFQCDGSMM-------LSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDK 503
            ++      M         S  + I++  ++A G+ YL+     K +HRD+ + N ++ +
Sbjct: 110 SYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAE 166
Query: 504 EMNGRLGDFGLAR-MHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEV 562
           +   ++GDFG+ R ++         + +  V +++PE    G  +T +DV+ FG+++ E+
Sbjct: 167 DFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 226
Query: 563 LSGRRPIEEGKPNLVEMVWELMVQGKXXXXXXXXXXXKGGFDEDE--VERVLHLGLLCAY 620
            +      +G  N  E V   +++G             G  D+ +   + +  L  +C  
Sbjct: 227 ATLAEQPYQGLSN--EQVLRFVMEG-------------GLLDKPDNCPDMLFELMRMCWQ 271
Query: 621 PDPRARPTMRQVVKVLEGKIEAG 643
            +P+ RP+  +++  ++ ++E G
Sbjct: 272 YNPKMRPSFLEIISSIKEEMEPG 294

>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At Thr265 Length = 278

Iteration: 1
 Score = 58.2 bits (139), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 52/193 (26%), Positives = 95/193 (49%), Gaps = 19/193 (9%)
Query: 386 EGGGAEIAVK-----RISHENDGGTRAFLA-EISSLGRLKHKSLVGLRGWCKREKGSLML 439
           +G G E A K     R+S    G +R  +  E++ L  ++H +++ L    +  K  ++L
Sbjct: 34  KGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFEN-KTDVVL 92
Query: 440 VYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNV 499
           + + +  G L  ++ + +    L+ +E  + LK +  GV YLH    K++ H D+K  N+
Sbjct: 93  ILELVSGGELFDFLAEKES---LTEDEATQFLKQILDGVHYLHS---KRIAHFDLKPENI 146
Query: 500 -LLDKEMNG---RLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGF 555
            LLDK +     +L DFG+A     G       + GT  ++APE+ +      + D++  
Sbjct: 147 MLLDKNVPNPRIKLIDFGIAHKIEAGN--EFKNIFGTPEFVAPEIVNYEPLGLEADMWSI 204
Query: 556 GILILEVLSGRRP 568
           G++   +LSG  P
Sbjct: 205 GVITYILLSGASP 217

>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With Lapatinib Length = 328

Iteration: 1
 Score = 58.2 bits (139), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 51/191 (26%), Positives = 95/191 (49%), Gaps = 18/191 (9%)
Query: 386 EGGGAEIAVK-RISHENDG--GTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYD 442
           EG   +I V  +I +E  G      F+ E   +  + H  LV L G C     ++ LV  
Sbjct: 39  EGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCL--SPTIQLVTQ 96
Query: 443 YMENGSLDKWIFQCD---GSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNV 499
            M +G L +++ +     GS +L     +     +A G++YL E   ++++HRD+ + NV
Sbjct: 97  LMPHGCLLEYVHEHKDNIGSQLL-----LNWCVQIAKGMMYLEE---RRLVHRDLAARNV 148
Query: 500 LLDKEMNGRLGDFGLAR-MHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGIL 558
           L+    + ++ DFGLAR + G  +  +       + ++A E     + + Q+DV+ +G+ 
Sbjct: 149 LVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVT 208
Query: 559 ILEVLS-GRRP 568
           I E+++ G +P
Sbjct: 209 IWELMTFGGKP 219

>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled Receptor Kinase 2 And Heterotrimeric G Protein Beta 1 And Gamma 2 Subunits Length = 689

Iteration: 1
 Score = 58.2 bits (139), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 33/102 (32%), Positives = 57/102 (55%), Gaps = 7/102 (6%)
Query: 473 DVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRVVGT 532
           ++  G+ ++H  +   V++RD+K +N+LLD+  + R+ D GLA      +  ++   VGT
Sbjct: 300 EIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS---VGT 353
Query: 533 VGYLAPEVFSSGRA-STQTDVFGFGILILEVLSGRRPIEEGK 573
            GY+APEV   G A  +  D F  G ++ ++L G  P  + K
Sbjct: 354 HGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHK 395

>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits Length = 695

Iteration: 1
 Score = 58.2 bits (139), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 33/102 (32%), Positives = 57/102 (55%), Gaps = 7/102 (6%)
Query: 473 DVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRVVGT 532
           ++  G+ ++H  +   V++RD+K +N+LLD+  + R+ D GLA      +  ++   VGT
Sbjct: 300 EIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS---VGT 353
Query: 533 VGYLAPEVFSSGRA-STQTDVFGFGILILEVLSGRRPIEEGK 573
            GY+APEV   G A  +  D F  G ++ ++L G  P  + K
Sbjct: 354 HGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHK 395

>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex With An Hydantoin Inhibitor Length = 305

Iteration: 1
 Score = 58.2 bits (139), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 55/263 (20%), Positives = 121/263 (46%), Gaps = 30/263 (11%)
Query: 392 IAVKRISHENDGGTR-AFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLD 450
           +A+K ++       R  FL E S +       +V L G   + + +L+++ + M  G L 
Sbjct: 49  VAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIM-ELMTRGDLK 107
Query: 451 KWIFQCDGSMM-------LSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDK 503
            ++      M         S  + I++  ++A G+ YL+     K +HRD+ + N ++ +
Sbjct: 108 SYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAE 164
Query: 504 EMNGRLGDFGLAR-MHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEV 562
           +   ++GDFG+ R ++         + +  V +++PE    G  +T +DV+ FG+++ E+
Sbjct: 165 DFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 224
Query: 563 LSGRRPIEEGKPNLVEMVWELMVQGKXXXXXXXXXXXKGGFDEDE--VERVLHLGLLCAY 620
            +      +G  N  E V   +++G             G  D+ +   + +  L  +C  
Sbjct: 225 ATLAEQPYQGLSN--EQVLRFVMEG-------------GLLDKPDNCPDMLFELMRMCWQ 269
Query: 621 PDPRARPTMRQVVKVLEGKIEAG 643
            +P+ RP+  +++  ++ ++E G
Sbjct: 270 YNPKMRPSFLEIISSIKEEMEPG 292

>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1 Receptor Kinase In Complex With Pqip Length = 301

Iteration: 1
 Score = 58.2 bits (139), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 56/263 (21%), Positives = 121/263 (46%), Gaps = 30/263 (11%)
Query: 392 IAVKRISHENDGGTR-AFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLD 450
           +A+K ++       R  FL E S +       +V L G   + + +L+++ + M  G L 
Sbjct: 45  VAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIM-ELMTRGDLK 103
Query: 451 KWIFQCDGSMM-------LSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDK 503
            ++      M         S  + I++  ++A G+ YL+     K +HRD+ + N  + +
Sbjct: 104 SYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCXVAE 160
Query: 504 EMNGRLGDFGLAR-MHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEV 562
           +   ++GDFG+ R ++         + +  V +++PE    G  +T +DV+ FG+++ E+
Sbjct: 161 DFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 220
Query: 563 LSGRRPIEEGKPNLVEMVWELMVQGKXXXXXXXXXXXKGGFDEDE--VERVLHLGLLCAY 620
            +      +G  N  E V   +++G             G  D+ +   + +L L  +C  
Sbjct: 221 ATLAEQPYQGLSN--EQVLRFVMEG-------------GLLDKPDNCPDMLLELMRMCWQ 265
Query: 621 PDPRARPTMRQVVKVLEGKIEAG 643
            +P+ RP+  +++  ++ ++E G
Sbjct: 266 YNPKMRPSFLEIISSIKEEMEPG 288

>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain Length = 308

Iteration: 1
 Score = 58.2 bits (139), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 55/263 (20%), Positives = 121/263 (46%), Gaps = 30/263 (11%)
Query: 392 IAVKRISHENDGGTR-AFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLD 450
           +A+K ++       R  FL E S +       +V L G   + + +L+++ + M  G L 
Sbjct: 52  VAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIM-ELMTRGDLK 110
Query: 451 KWIFQCDGSMM-------LSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDK 503
            ++      M         S  + I++  ++A G+ YL+     K +HRD+ + N ++ +
Sbjct: 111 SYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAE 167
Query: 504 EMNGRLGDFGLAR-MHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEV 562
           +   ++GDFG+ R ++         + +  V +++PE    G  +T +DV+ FG+++ E+
Sbjct: 168 DFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 227
Query: 563 LSGRRPIEEGKPNLVEMVWELMVQGKXXXXXXXXXXXKGGFDEDE--VERVLHLGLLCAY 620
            +      +G  N  E V   +++G             G  D+ +   + +  L  +C  
Sbjct: 228 ATLAEQPYQGLSN--EQVLRFVMEG-------------GLLDKPDNCPDMLFELMRMCWQ 272
Query: 621 PDPRARPTMRQVVKVLEGKIEAG 643
            +P+ RP+  +++  ++ ++E G
Sbjct: 273 YNPKMRPSFLEIISSIKEEMEPG 295

>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A Benzimidazole Inhibitor Length = 307

Iteration: 1
 Score = 58.2 bits (139), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 55/263 (20%), Positives = 121/263 (46%), Gaps = 30/263 (11%)
Query: 392 IAVKRISHENDGGTR-AFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLD 450
           +A+K ++       R  FL E S +       +V L G   + + +L+++ + M  G L 
Sbjct: 51  VAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIM-ELMTRGDLK 109
Query: 451 KWIFQCDGSMM-------LSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDK 503
            ++      M         S  + I++  ++A G+ YL+     K +HRD+ + N ++ +
Sbjct: 110 SYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAE 166
Query: 504 EMNGRLGDFGLAR-MHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEV 562
           +   ++GDFG+ R ++         + +  V +++PE    G  +T +DV+ FG+++ E+
Sbjct: 167 DFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 226
Query: 563 LSGRRPIEEGKPNLVEMVWELMVQGKXXXXXXXXXXXKGGFDEDE--VERVLHLGLLCAY 620
            +      +G  N  E V   +++G             G  D+ +   + +  L  +C  
Sbjct: 227 ATLAEQPYQGLSN--EQVLRFVMEG-------------GLLDKPDNCPDMLFELMRMCWQ 271
Query: 621 PDPRARPTMRQVVKVLEGKIEAG 643
            +P+ RP+  +++  ++ ++E G
Sbjct: 272 YNPKMRPSFLEIISSIKEEMEPG 294

>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits Length = 689

Iteration: 1
 Score = 58.2 bits (139), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 33/102 (32%), Positives = 57/102 (55%), Gaps = 7/102 (6%)
Query: 473 DVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRVVGT 532
           ++  G+ ++H  +   V++RD+K +N+LLD+  + R+ D GLA      +  ++   VGT
Sbjct: 300 EIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS---VGT 353
Query: 533 VGYLAPEVFSSGRA-STQTDVFGFGILILEVLSGRRPIEEGK 573
            GY+APEV   G A  +  D F  G ++ ++L G  P  + K
Sbjct: 354 HGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHK 395

>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679 Length = 279

Iteration: 1
 Score = 58.2 bits (139), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 43/172 (25%), Positives = 78/172 (45%), Gaps = 12/172 (6%)
Query: 400 ENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGS 459
           E  G       E+     L+H +++ L G+   +   + L+ +Y   G+    +++    
Sbjct: 48  EKAGVEHQLRREVEIQSHLRHPNILRLYGYF-HDATRVYLILEYAPLGT----VYRELQK 102
Query: 460 MMLSCEERIRV-LKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMH 518
           +    E+R    + ++A  + Y H    K+V+HRDIK  N+LL      ++ DFG +   
Sbjct: 103 LSKFDEQRTATYITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWS--- 156
Query: 519 GHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIE 570
            H   +    + GT+ YL PE+        + D++  G+L  E L G+ P E
Sbjct: 157 VHAPSSRRDTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 208

>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol (Soak) Length = 688

Iteration: 1
 Score = 58.2 bits (139), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 33/102 (32%), Positives = 57/102 (55%), Gaps = 7/102 (6%)
Query: 473 DVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRVVGT 532
           ++  G+ ++H  +   V++RD+K +N+LLD+  + R+ D GLA      +  ++   VGT
Sbjct: 299 EIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS---VGT 352
Query: 533 VGYLAPEVFSSGRA-STQTDVFGFGILILEVLSGRRPIEEGK 573
            GY+APEV   G A  +  D F  G ++ ++L G  P  + K
Sbjct: 353 HGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHK 394

>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of Pyrazolopyridine- Sulfonamides As Potent Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I) Length = 271

Iteration: 1
 Score = 58.2 bits (139), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 43/172 (25%), Positives = 78/172 (45%), Gaps = 12/172 (6%)
Query: 400 ENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGS 459
           E  G       E+     L+H +++ L G+   +   + L+ +Y   G+    +++    
Sbjct: 50  EKAGVEHQLRREVEIQSHLRHPNILRLYGYF-HDATRVYLILEYAPLGT----VYRELQK 104
Query: 460 MMLSCEERIRV-LKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMH 518
           +    E+R    + ++A  + Y H    K+V+HRDIK  N+LL      ++ DFG +   
Sbjct: 105 LSKFDEQRTATYITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWS--- 158
Query: 519 GHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIE 570
            H   +    + GT+ YL PE+        + D++  G+L  E L G+ P E
Sbjct: 159 VHAPSSRRDDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 210

>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors Length = 283

Iteration: 1
 Score = 58.2 bits (139), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 43/172 (25%), Positives = 78/172 (45%), Gaps = 12/172 (6%)
Query: 400 ENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGS 459
           E  G       E+     L+H +++ L G+   +   + L+ +Y   G+    +++    
Sbjct: 50  EKAGVEHQLRREVEIQSHLRHPNILRLYGYF-HDATRVYLILEYAPLGT----VYRELQK 104
Query: 460 MMLSCEERIRV-LKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMH 518
           +    E+R    + ++A  + Y H    K+V+HRDIK  N+LL      ++ DFG +   
Sbjct: 105 LSKFDEQRTATYITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWS--- 158
Query: 519 GHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIE 570
            H   +    + GT+ YL PE+        + D++  G+L  E L G+ P E
Sbjct: 159 VHAPSSRRAALCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 210

>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1 Kinase Length = 288

Iteration: 1
 Score = 58.2 bits (139), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 53/190 (27%), Positives = 90/190 (47%), Gaps = 19/190 (10%)
Query: 389 GAEIAVKRISHENDGGTRAFLA------EISSLGRLKHKSLVGLRGWCKREKGSLMLVYD 442
           G E A K I       +R  ++      E+S L ++ H +++ L       +  ++L+ +
Sbjct: 37  GLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHD-VYENRTDVVLILE 95
Query: 443 YMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNV-LL 501
            +  G L  ++ Q +    LS EE    +K +  GV YLH    KK+ H D+K  N+ LL
Sbjct: 96  LVSGGELFDFLAQKES---LSEEEATSFIKQILDGVNYLHT---KKIAHFDLKPENIMLL 149
Query: 502 DKEM---NGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGIL 558
           DK +   + +L DFGLA     G       + GT  ++APE+ +      + D++  G++
Sbjct: 150 DKNIPIPHIKLIDFGLAHEIEDG--VEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVI 207
Query: 559 ILEVLSGRRP 568
              +LSG  P
Sbjct: 208 TYILLSGASP 217

>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor Kinase Length = 299

Iteration: 1
 Score = 57.8 bits (138), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 56/263 (21%), Positives = 120/263 (45%), Gaps = 30/263 (11%)
Query: 392 IAVKRISHENDGGTR-AFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLD 450
           +A+K ++       R  FL E S +       +V L G   + + +L ++ + M  G L 
Sbjct: 43  VAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTL-VIMELMTRGDLK 101
Query: 451 KWIFQCDGSMM-------LSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDK 503
            ++      M         S  + I++  ++A G+ YL+     K +HRD+ + N ++ +
Sbjct: 102 SYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAE 158
Query: 504 EMNGRLGDFGLAR-MHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEV 562
           +   ++GDFG+ R +          + +  V +++PE    G  +T +DV+ FG+++ E+
Sbjct: 159 DFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 218
Query: 563 LSGRRPIEEGKPNLVEMVWELMVQGKXXXXXXXXXXXKGGFDEDE--VERVLHLGLLCAY 620
            +      +G  N  E V   +++G             G  D+ +   + +L L  +C  
Sbjct: 219 ATLAEQPYQGLSN--EQVLRFVMEG-------------GLLDKPDNCPDMLLELMRMCWQ 263
Query: 621 PDPRARPTMRQVVKVLEGKIEAG 643
            +P+ RP+  +++  ++ ++E G
Sbjct: 264 YNPKMRPSFLEIISSIKEEMEPG 286

>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase ( Diphosphorylated Form) Bound To 5- Amino-3-((4-( Aminosulfonyl)phenyl)amino)-N-(2,6- Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide Length = 325

Iteration: 1
 Score = 57.8 bits (138), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 47/188 (25%), Positives = 90/188 (47%), Gaps = 14/188 (7%)
Query: 393 AVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDKW 452
           A K I  +++     ++ EI  L    H ++V L      E  +L ++ ++   G++D  
Sbjct: 66  AAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYE-NNLWILIEFCAGGAVDAV 124
Query: 453 IFQCDGSMMLSCEERIRVL-KDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGD 511
           + + +  +    E +I+V+ K     + YLH+    K++HRD+K+ N+L   + + +L D
Sbjct: 125 MLELERPLT---ESQIQVVCKQTLDALNYLHDN---KIIHRDLKAGNILFTLDGDIKLAD 178
Query: 512 FGLARMHGHGQVASTTRVVGTVGYLAPEVF----SSGRA-STQTDVFGFGILILEVLSGR 566
           FG++  +    +      +GT  ++APEV     S  R    + DV+  GI ++E+    
Sbjct: 179 FGVSAKNTR-XIQRRDXFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIE 237
Query: 567 RPIEEGKP 574
            P  E  P
Sbjct: 238 PPHHELNP 245

>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin. Length = 284

Iteration: 1
 Score = 57.8 bits (138), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 42/171 (24%), Positives = 78/171 (45%), Gaps = 10/171 (5%)
Query: 400 ENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGS 459
           E +G       EI     L+H +++ +  +   ++  + L+ ++   G L K + Q  G 
Sbjct: 53  EKEGVEHQLRREIEIQSHLRHPNILRMYNYF-HDRKRIYLMLEFAPRGELYKEL-QKHGR 110
Query: 460 MMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHG 519
                +     ++++A  + Y HE   +KV+HRDIK  N+L+  +   ++ DFG +    
Sbjct: 111 --FDEQRSATFMEELADALHYCHE---RKVIHRDIKPENLLMGYKGELKIADFGWS---V 162
Query: 520 HGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIE 570
           H        + GT+ YL PE+        + D++  G+L  E L G  P +
Sbjct: 163 HAPSLRRRXMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFD 213

>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded Form) Length = 325

Iteration: 1
 Score = 57.8 bits (138), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 47/188 (25%), Positives = 90/188 (47%), Gaps = 14/188 (7%)
Query: 393 AVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDKW 452
           A K I  +++     ++ EI  L    H ++V L      E  +L ++ ++   G++D  
Sbjct: 66  AAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYE-NNLWILIEFCAGGAVDAV 124
Query: 453 IFQCDGSMMLSCEERIRVL-KDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGD 511
           + + +  +    E +I+V+ K     + YLH+    K++HRD+K+ N+L   + + +L D
Sbjct: 125 MLELERPLT---ESQIQVVCKQTLDALNYLHDN---KIIHRDLKAGNILFTLDGDIKLAD 178
Query: 512 FGLARMHGHGQVASTTRVVGTVGYLAPEVF----SSGRA-STQTDVFGFGILILEVLSGR 566
           FG++  +    +      +GT  ++APEV     S  R    + DV+  GI ++E+    
Sbjct: 179 FGVSAKNTR-XIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIE 237
Query: 567 RPIEEGKP 574
            P  E  P
Sbjct: 238 PPHHELNP 245

>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With Pyrimidine 8 Length = 301

Iteration: 1
 Score = 57.8 bits (138), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 55/263 (20%), Positives = 121/263 (46%), Gaps = 30/263 (11%)
Query: 392 IAVKRISHENDGGTR-AFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLD 450
           +A+K ++       R  FL E S +       +V L G   + + +L+++ + M  G L 
Sbjct: 45  VAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIM-ELMTRGDLK 103
Query: 451 KWIFQCDGSMM-------LSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDK 503
            ++      M         S  + I++  ++A G+ YL+     K +HRD+ + N ++ +
Sbjct: 104 SYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAE 160
Query: 504 EMNGRLGDFGLAR-MHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEV 562
           +   ++GDFG+ R ++         + +  V +++PE    G  +T +DV+ FG+++ E+
Sbjct: 161 DFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 220
Query: 563 LSGRRPIEEGKPNLVEMVWELMVQGKXXXXXXXXXXXKGGFDEDE--VERVLHLGLLCAY 620
            +      +G  N  E V   +++G             G  D+ +   + +  L  +C  
Sbjct: 221 ATLAEQPYQGLSN--EQVLRFVMEG-------------GLLDKPDNCPDMLFELMRMCWQ 265
Query: 621 PDPRARPTMRQVVKVLEGKIEAG 643
            +P+ RP+  +++  ++ ++E G
Sbjct: 266 YNPKMRPSFLEIISSIKEEMEPG 288

>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase Domain Complexed With The Inhibitor Pp1 Length = 314

Iteration: 1
 Score = 57.8 bits (138), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 62/272 (22%), Positives = 120/272 (44%), Gaps = 36/272 (13%)
Query: 387 GGGAEIAVKRIS-HENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYME 445
            G   +AVK +  + +    R  L+E + L ++ H  ++ L G C ++ G L+L+ +Y +
Sbjct: 51  AGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQD-GPLLLIVEYAK 109
Query: 446 NGSLDKWIFQCDG--------------SMMLSCEERIRVLKDVAAGVLYLHEGW----EK 487
            GSL  ++ +                 S +   +ER   + D+ +    + +G     E 
Sbjct: 110 YGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEM 169
Query: 488 KVLHRDIKSSNVLLDKEMNGRLGDFGLAR-MHGHGQVASTTRVVGTVGYLAPEVFSSGRA 546
            ++HRD+ + N+L+ +    ++ DFGL+R ++        ++    V ++A E       
Sbjct: 170 SLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSXVKRSQGRIPVKWMAIESLFDHIY 229
Query: 547 STQTDVFGFGILILEVLS-GRRPIEEGKPNLVEMVWELMVQGKXXXXXXXXXXXKGGFDE 605
           +TQ+DV+ FG+L+ E+++ G  P     P   E ++ L+  G                 +
Sbjct: 230 TTQSDVWSFGVLLWEIVTLGGNPYPGIPP---ERLFNLLKTGHRMER-----------PD 275
Query: 606 DEVERVLHLGLLCAYPDPRARPTMRQVVKVLE 637
           +  E +  L L C   +P  RP    + K LE
Sbjct: 276 NCSEEMYRLMLQCWKQEPDKRPVFADISKDLE 307

>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182 Length = 353

Iteration: 1
 Score = 57.8 bits (138), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 48/179 (26%), Positives = 82/179 (45%), Gaps = 23/179 (12%)
Query: 409 LAEISSLGRLKHKSLVGLRGWCKREK----GSLMLVYDYMENGSLDKWIFQCDGSMMLSC 464
           L EI  L   KH++++ +    + +       + ++ + M+       + +   + MLS 
Sbjct: 57  LREIKILKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTD-----LHRVISTQMLSD 111
Query: 465 EERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARM------- 517
           +     +      V  LH      V+HRD+K SN+L++   + ++ DFGLAR+       
Sbjct: 112 DHIQYFIYQTLRAVKVLHGS---NVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAAD 168
Query: 518 --HGHGQVASTTRVVGTVGYLAPEV-FSSGRASTQTDVFGFGILILEVLSGRRPIEEGK 573
                GQ +  T  V T  Y APEV  +S + S   DV+  G ++ E+   RRPI  G+
Sbjct: 169 NSEPTGQQSGMTEXVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFL-RRPIFPGR 226

>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5- Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6- Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide Length = 325

Iteration: 1
 Score = 57.8 bits (138), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 47/188 (25%), Positives = 90/188 (47%), Gaps = 14/188 (7%)
Query: 393 AVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDKW 452
           A K I  +++     ++ EI  L    H ++V L      E  +L ++ ++   G++D  
Sbjct: 66  AAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYE-NNLWILIEFCAGGAVDAV 124
Query: 453 IFQCDGSMMLSCEERIRVL-KDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGD 511
           + + +  +    E +I+V+ K     + YLH+    K++HRD+K+ N+L   + + +L D
Sbjct: 125 MLELERPLT---ESQIQVVCKQTLDALNYLHDN---KIIHRDLKAGNILFTLDGDIKLAD 178
Query: 512 FGLARMHGHGQVASTTRVVGTVGYLAPEVF----SSGRA-STQTDVFGFGILILEVLSGR 566
           FG++  +    +      +GT  ++APEV     S  R    + DV+  GI ++E+    
Sbjct: 179 FGVSAKNTRT-IQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIE 237
Query: 567 RPIEEGKP 574
            P  E  P
Sbjct: 238 PPHHELNP 245

>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3 Length = 353

Iteration: 1
 Score = 57.8 bits (138), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 49/179 (27%), Positives = 82/179 (45%), Gaps = 23/179 (12%)
Query: 409 LAEISSLGRLKHKSLVGLRGWCKREK----GSLMLVYDYMENGSLDKWIFQCDGSMMLSC 464
           L EI  L   KH++++ +    + +       + ++ + M+       + +   + MLS 
Sbjct: 57  LREIKILKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTD-----LHRVISTQMLSD 111
Query: 465 EERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARM------- 517
           +     +      V  LH      V+HRD+K SN+L++   + ++ DFGLAR+       
Sbjct: 112 DHIQYFIYQTLRAVKVLHGS---NVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAAD 168
Query: 518 --HGHGQVASTTRVVGTVGYLAPEV-FSSGRASTQTDVFGFGILILEVLSGRRPIEEGK 573
                GQ +  T  V T  Y APEV  +S + S   DV+  G ++ E L  RRPI  G+
Sbjct: 169 NSEPTGQQSGMTEYVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAE-LFLRRPIFPGR 226

>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC Length = 405

Iteration: 1
 Score = 57.8 bits (138), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 54/192 (28%), Positives = 87/192 (45%), Gaps = 30/192 (15%)
Query: 393 AVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRG-WCKREKGSLMLVYDYMEN----- 446
           A+K+I  E  G + +   EI+ L  LKH +++ L+  +       + L++DY E+     
Sbjct: 52  ALKQI--EGTGISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAEHDLWHI 109
Query: 447 ------GSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVL 500
                    +K   Q    M+ S      +L  +  G+ YLH  W   VLHRD+K +N+L
Sbjct: 110 IKFHRASKANKKPVQLPRGMVKS------LLYQILDGIHYLHANW---VLHRDLKPANIL 160
Query: 501 LDKEMNGR----LGDFGLARMHGH--GQVASTTRVVGTVGYLAPEVFSSGRASTQT-DVF 553
           +  E   R    + D G AR+       +A    VV T  Y APE+    R  T+  D++
Sbjct: 161 VMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIW 220
Query: 554 GFGILILEVLSG 565
             G +  E+L+ 
Sbjct: 221 AIGCIFAELLTS 232

>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In Complex With Sto-609 Length = 298

Iteration: 1
 Score = 57.8 bits (138), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 45/170 (26%), Positives = 82/170 (48%), Gaps = 12/170 (7%)
Query: 403 GGTRAFLAEISSLGRLKHKSLVGL-RGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMM 461
           G       EI+ L +L H ++V L        +  L +V++ +  G     + +      
Sbjct: 78  GPIEQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGP----VMEVPTLKP 133
Query: 462 LSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHG 521
           LS ++     +D+  G+ YLH    +K++HRDIK SN+L+ ++ + ++ DFG++     G
Sbjct: 134 LSEDQARFYFQDLIKGIEYLHY---QKIIHRDIKPSNLLVGEDGHIKIADFGVSN-EFKG 189
Query: 522 QVASTTRVVGTVGYLAPEVFSSGR---ASTQTDVFGFGILILEVLSGRRP 568
             A  +  VGT  ++APE  S  R   +    DV+  G+ +   + G+ P
Sbjct: 190 SDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCP 239

>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439 Length = 285

Iteration: 1
 Score = 57.8 bits (138), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 42/171 (24%), Positives = 78/171 (45%), Gaps = 10/171 (5%)
Query: 400 ENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGS 459
           E +G       EI     L+H +++ +  +   ++  + L+ ++   G L K + Q  G 
Sbjct: 54  EKEGVEHQLRREIEIQSHLRHPNILRMYNYF-HDRKRIYLMLEFAPRGELYKEL-QKHGR 111
Query: 460 MMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHG 519
                +     ++++A  + Y HE   +KV+HRDIK  N+L+  +   ++ DFG +    
Sbjct: 112 --FDEQRSATFMEELADALHYCHE---RKVIHRDIKPENLLMGYKGELKIADFGWS---V 163
Query: 520 HGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIE 570
           H        + GT+ YL PE+        + D++  G+L  E L G  P +
Sbjct: 164 HAPSLRRRXMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFD 214

>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40 Length = 321

Iteration: 1
 Score = 57.8 bits (138), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 53/190 (27%), Positives = 90/190 (47%), Gaps = 19/190 (10%)
Query: 389 GAEIAVKRISHENDGGTRAFLA------EISSLGRLKHKSLVGLRGWCKREKGSLMLVYD 442
           G E A K I       +R  ++      E+S L ++ H +++ L       +  ++L+ +
Sbjct: 37  GLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHD-VYENRTDVVLILE 95
Query: 443 YMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNV-LL 501
            +  G L  ++ Q +    LS EE    +K +  GV YLH    KK+ H D+K  N+ LL
Sbjct: 96  LVSGGELFDFLAQKES---LSEEEATSFIKQILDGVNYLHT---KKIAHFDLKPENIMLL 149
Query: 502 DKEM---NGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGIL 558
           DK +   + +L DFGLA     G       + GT  ++APE+ +      + D++  G++
Sbjct: 150 DKNIPIPHIKLIDFGLAHEIEDG--VEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVI 207
Query: 559 ILEVLSGRRP 568
              +LSG  P
Sbjct: 208 TYILLSGASP 217

>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The Autoinhibited Conformation Of A Human Death-associated Protein Kinase Length = 321

Iteration: 1
 Score = 57.8 bits (138), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 53/190 (27%), Positives = 90/190 (47%), Gaps = 19/190 (10%)
Query: 389 GAEIAVKRISHENDGGTRAFLA------EISSLGRLKHKSLVGLRGWCKREKGSLMLVYD 442
           G E A K I       +R  ++      E+S L ++ H +++ L       +  ++L+ +
Sbjct: 37  GLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHD-VYENRTDVVLILE 95
Query: 443 YMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNV-LL 501
            +  G L  ++ Q +    LS EE    +K +  GV YLH    KK+ H D+K  N+ LL
Sbjct: 96  LVSGGELFDFLAQKES---LSEEEATSFIKQILDGVNYLHT---KKIAHFDLKPENIMLL 149
Query: 502 DKEM---NGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGIL 558
           DK +   + +L DFGLA     G       + GT  ++APE+ +      + D++  G++
Sbjct: 150 DKNIPIPHIKLIDFGLAHEIEDG--VEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVI 207
Query: 559 ILEVLSGRRP 568
              +LSG  P
Sbjct: 208 TYILLSGASP 217

>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein Kinase Domain Length = 387

Iteration: 1
 Score = 57.4 bits (137), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 44/160 (27%), Positives = 75/160 (46%), Gaps = 10/160 (6%)
Query: 411 EISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRV 470
           EIS + +L H  L+ L      +K  ++L+ +++  G L   I   D  M  S  E I  
Sbjct: 98  EISIMNQLHHPKLINLHD-AFEDKYEMVLILEFLSGGELFDRIAAEDYKM--SEAEVINY 154
Query: 471 LKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLD--KEMNGRLGDFGLARMHGHGQVASTTR 528
           ++    G+ ++HE     ++H DIK  N++ +  K  + ++ DFGLA      ++   T 
Sbjct: 155 MRQACEGLKHMHE---HSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKVT- 210
Query: 529 VVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRP 568
              T  + APE+         TD++  G+L   +LSG  P
Sbjct: 211 -TATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSP 249

>pdb|1FAY|A Chain A, Winged Bean Acidic Lectin Complexed With Methyl-Alpha-D-Galactose (Monoclinic Form) Length = 238

Iteration: 1
 Score = 57.4 bits (137), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 75/265 (28%), Positives = 108/265 (40%), Gaps = 51/265 (19%)
Query: 28  FVFNGF--NSSNLSLYGTATVESR-ILTLTNSTTF------TIGRALYPSKIPTKRPNSS 78
           F F+ F  NS  L+L   A+++S  +L LT  T        + GRALY   I      + 
Sbjct: 5   FNFDHFEENSKELNLQRQASIKSNGVLELTKLTKNGVPVWKSTGRALYAEPIKIWDSTTG 64
Query: 79  YVYPFSTSFIFAMA-PYKGVLAGHGLVFLFVPFHGIKGATEAQHLGLFNRTNDGNSSNHV 137
            V  F T F F +  PY       GL F  VP +  +G  +  +LG+F      N+    
Sbjct: 65  NVASFETRFSFNITQPYAYPEPADGLTFFMVPPNSPQGE-DGGNLGVFKPPEGDNA---- 119
Query: 138 FGVEFDVFKNQEFNDIDENHVGIDVNSLTSVSAHAAGYWPDNQXXXXXXXXXXXXXXXEK 197
           F VEFD F+N    D    H+GIDVNS+ S                              
Sbjct: 120 FAVEFDTFQNTW--DPQVPHIGIDVNSIVSSKT--------------------------- 150
Query: 198 SFKELKLNNGKNYQVWIDYADSFINITMVEAGMKRPKRPLLSVPLNLSGVLEDEMY--VG 255
                +L NG    V I Y      + +V A         LS  ++L     +  +  VG
Sbjct: 151 --LHFQLENGGVANVVIKYDSPTKILNVVLAFHSVGTVYTLSNIVDLKQEFPNSEWVNVG 208
Query: 256 FTAATG---QLVESHKILAWSFSNT 277
            +A TG     VE+H+I++WSF+++
Sbjct: 209 LSATTGYQKNAVETHEIISWSFTSS 233

>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine Inhibitor Length = 321

Iteration: 1
 Score = 57.4 bits (137), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 51/191 (26%), Positives = 95/191 (49%), Gaps = 18/191 (9%)
Query: 386 EGGGAEIAVK-RISHENDG--GTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYD 442
           EG   +I V  +I +E  G      F+ E   +  + H  LV L G C     ++ LV  
Sbjct: 62  EGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLSP--TIQLVTQ 119
Query: 443 YMENGSLDKWIFQCD---GSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNV 499
            M +G L +++ +     GS +L     +     +A G++YL E   ++++HRD+ + NV
Sbjct: 120 LMPHGCLLEYVHEHKDNIGSQLL-----LNWCVQIAKGMMYLEE---RRLVHRDLAARNV 171
Query: 500 LLDKEMNGRLGDFGLAR-MHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGIL 558
           L+    + ++ DFGLAR + G  +  +       + ++A E     + + Q+DV+ +G+ 
Sbjct: 172 LVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVT 231
Query: 559 ILEVLS-GRRP 568
           I E+++ G +P
Sbjct: 232 IWELMTFGGKP 242

>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase 3 (Dapk3) In Complex With A Beta-Carboline Ligand Length = 283

Iteration: 1
 Score = 57.4 bits (137), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 52/193 (26%), Positives = 95/193 (49%), Gaps = 19/193 (9%)
Query: 386 EGGGAEIAVK-----RISHENDGGTRAFLA-EISSLGRLKHKSLVGLRGWCKREKGSLML 439
           +G G E A K     R+S    G +R  +  E++ L  ++H +++ L    +  K  ++L
Sbjct: 27  KGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFEN-KTDVVL 85
Query: 440 VYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNV 499
           + + +  G L  ++ + +    L+ +E  + LK +  GV YLH    K++ H D+K  N+
Sbjct: 86  ILELVSGGELFDFLAEKES---LTEDEATQFLKQILDGVHYLHS---KRIAHFDLKPENI 139
Query: 500 -LLDKEMNG---RLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGF 555
            LLDK +     +L DFG+A     G       + GT  ++APE+ +      + D++  
Sbjct: 140 MLLDKNVPNPRIKLIDFGIAHKIEAGN--EFKNIFGTPEFVAPEIVNYEPLGLEADMWSI 197
Query: 556 GILILEVLSGRRP 568
           G++   +LSG  P
Sbjct: 198 GVITYILLSGASP 210

>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From Toxoplasma Gondii, 541.m00134, Kinase Domain Length = 287

Iteration: 1
 Score = 57.4 bits (137), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 50/187 (26%), Positives = 93/187 (49%), Gaps = 18/187 (9%)
Query: 389 GAEIAVKRISHENDGGTR---AFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYME 445
           GAE A+K I   +   T    A L E++ L +L H +++ L  + + ++   +++  Y  
Sbjct: 46  GAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPNIMKLYEFFEDKRNYYLVMEVYRG 105
Query: 446 NGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEM 505
               D+ I +   S +    +   ++K V +G  YLH+     ++HRD+K  N+LL+ + 
Sbjct: 106 GELFDEIILRQKFSEV----DAAVIMKQVLSGTTYLHK---HNIVHRDLKPENLLLESKS 158
Query: 506 NG---RLGDFGLARMHGHGQVASTTR-VVGTVGYLAPEVFSSGRASTQTDVFGFGILILE 561
                ++ DFGL+    H +V    +  +GT  Y+APEV    +   + DV+  G+++  
Sbjct: 159 RDALIKIVDFGLS---AHFEVGGKMKERLGTAYYIAPEVLRK-KYDEKCDVWSCGVILYI 214
Query: 562 VLSGRRP 568
           +L G  P
Sbjct: 215 LLCGYPP 221

>pdb|1HQL|A Chain A, The Xenograft Antigen In Complex With The B4 Isolectin Of Griffonia Simplicifolia Lectin-1 Length = 257

Iteration: 1
 Score = 57.4 bits (137), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 72/265 (27%), Positives = 108/265 (40%), Gaps = 44/265 (16%)
Query: 25  AVDFVFNGFNSS---NLSLYGTATVESRILTLTNSTTF------TIGRALYPSKIPTKRP 75
           +V F F  F S    ++   G A   +  L L  +  +      + GRALY   +     
Sbjct: 4   SVSFTFPNFWSDVEDSIIFQGDANTTAGTLQLCKTNQYGTPLQWSAGRALYSDPVQLWDN 63
Query: 76  NSSYVYPFSTSFIFAMAPYKGVLAGHGLVFLFVPFHG-IKGATEAQHLGLFNR-TNDGNS 133
            +  V  F T F F +    G     GL F   P    +K A E  +LGLFN+ T    S
Sbjct: 64  KTESVASFYTEFTFFLK-ITGNGPADGLAFFLAPPDSDVKDAGE--YLGLFNKSTATQPS 120
Query: 134 SNHVFGVEFDVFKNQEFNDIDENHVGIDVNSLTSVSAHAAGYWPDNQXXXXXXXXXXXXX 193
            N V  VEFD + N  F +    H+GI+VNS+ SV+                        
Sbjct: 121 KNQVVAVEFDTWTNPNFPEPSYRHIGINVNSIVSVAT----------------------- 157
Query: 194 XXEKSFKELKLNNGKNYQVWIDYADSFINITMVEAGMKRPKRPLLSVPLNLSGVLEDEMY 253
              K +++  + +GK     I Y D    I  V          +LS  +++   L + + 
Sbjct: 158 ---KRWEDSDIFSGKIATARISY-DGSAEILTVVLSYPDGSDYILSHSVDMRQNLPESVR 213
Query: 254 VGFTAATG--QLVESHKILAWSFSN 276
           VG +A+TG  Q +  + IL+W FS+
Sbjct: 214 VGISASTGNNQFLTVY-ILSWRFSS 237

>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form With 3 Monomers In The Asymmetric Unit Length = 321

Iteration: 1
 Score = 57.4 bits (137), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 53/190 (27%), Positives = 90/190 (47%), Gaps = 19/190 (10%)
Query: 389 GAEIAVKRISHENDGGTRAFLA------EISSLGRLKHKSLVGLRGWCKREKGSLMLVYD 442
           G E A K I       +R  ++      E+S L ++ H +++ L       +  ++L+ +
Sbjct: 37  GLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHD-VYENRTDVVLILE 95
Query: 443 YMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNV-LL 501
            +  G L  ++ Q +    LS EE    +K +  GV YLH    KK+ H D+K  N+ LL
Sbjct: 96  LVSGGELFDFLAQKES---LSEEEATSFIKQILDGVNYLHT---KKIAHFDLKPENIMLL 149
Query: 502 DKEM---NGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGIL 558
           DK +   + +L DFGLA     G       + GT  ++APE+ +      + D++  G++
Sbjct: 150 DKNIPIPHIKLIDFGLAHEIEDG--VEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVI 207
Query: 559 ILEVLSGRRP 568
              +LSG  P
Sbjct: 208 TYILLSGASP 217

>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form With 8 Monomers In The Asymmetric Unit Length = 321

Iteration: 1
 Score = 57.4 bits (137), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 53/190 (27%), Positives = 90/190 (47%), Gaps = 19/190 (10%)
Query: 389 GAEIAVKRISHENDGGTRAFLA------EISSLGRLKHKSLVGLRGWCKREKGSLMLVYD 442
           G E A K I       +R  ++      E+S L ++ H +++ L       +  ++L+ +
Sbjct: 37  GLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHD-VYENRTDVVLILE 95
Query: 443 YMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNV-LL 501
            +  G L  ++ Q +    LS EE    +K +  GV YLH    KK+ H D+K  N+ LL
Sbjct: 96  LVSGGELFDFLAQKES---LSEEEATSFIKQILDGVNYLHT---KKIAHFDLKPENIMLL 149
Query: 502 DKEM---NGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGIL 558
           DK +   + +L DFGLA     G       + GT  ++APE+ +      + D++  G++
Sbjct: 150 DKNIPIPHIKLIDFGLAHEIEDG--VEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVI 207
Query: 559 ILEVLSGRRP 568
              +LSG  P
Sbjct: 208 TYILLSGASP 217

>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 57.0 bits (136), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 50/180 (27%), Positives = 85/180 (47%), Gaps = 16/180 (8%)
Query: 392 IAVKRISHENDGGTRAFLA--EISSLGRLKHKSLVGLRGWCKREKG--SLMLVYDYME-- 445
           +A+K++S      T A  A  E+  +  + HK+++GL      +K       VY  ME  
Sbjct: 52  VAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM 111
Query: 446 NGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEM 505
           + +L + I      M L  E    +L  +  G+ +LH      ++HRD+K SN+++  + 
Sbjct: 112 DANLSQVI-----QMELDHERMSYLLYQMLVGIKHLHSA---GIIHRDLKPSNIVVKSDA 163
Query: 506 NGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSG 565
             ++ DFGLAR  G   +   T  V T  Y APEV          D++  G+++ E++ G
Sbjct: 164 TLKILDFGLARTAGTSFM--MTPYVVTRYYRAPEVILGMGYKENVDIWSVGVIMGEMIKG 221

>pdb|1GNZ|A Chain A, Lectin I-B4 From Griffonia Simplicifolia (Gs I-B4)metal Free Form Length = 257

Iteration: 1
 Score = 57.0 bits (136), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 72/265 (27%), Positives = 108/265 (40%), Gaps = 44/265 (16%)
Query: 25  AVDFVFNGFNSS---NLSLYGTATVESRILTLTNSTTF------TIGRALYPSKIPTKRP 75
           +V F F  F S    ++   G A   +  L L  +  +      + GRALY   +     
Sbjct: 4   SVSFTFPNFWSDVEDSIIFQGDANTTAGTLQLCKTNQYGTPLQWSAGRALYSDPVQLWDN 63
Query: 76  NSSYVYPFSTSFIFAMAPYKGVLAGHGLVFLFVPFHG-IKGATEAQHLGLFNR-TNDGNS 133
            +  V  F T F F +    G     GL F   P    +K A E  +LGLFN+ T    S
Sbjct: 64  KTESVASFYTEFTFFLK-ITGNGPADGLAFFLAPPDSDVKDAGE--YLGLFNKSTATQPS 120
Query: 134 SNHVFGVEFDVFKNQEFNDIDENHVGIDVNSLTSVSAHAAGYWPDNQXXXXXXXXXXXXX 193
            N V  VEFD + N  F +    H+GI+VNS+ SV+                        
Sbjct: 121 KNQVVAVEFDTWTNPNFPEPSYRHIGINVNSIVSVAT----------------------- 157
Query: 194 XXEKSFKELKLNNGKNYQVWIDYADSFINITMVEAGMKRPKRPLLSVPLNLSGVLEDEMY 253
              K +++  + +GK     I Y D    I  V          +LS  +++   L + + 
Sbjct: 158 ---KRWEDSDIFSGKIATARISY-DGSAEILTVVLSYPDGSDYILSHSVDMRQNLPESVR 213
Query: 254 VGFTAATG--QLVESHKILAWSFSN 276
           VG +A+TG  Q +  + IL+W FS+
Sbjct: 214 VGISASTGNNQFLTVY-ILSWRFSS 237

>pdb|1N47|A Chain A, Isolectin B4 From Vicia Villosa In Complex With The Tn Antigen Length = 233

Iteration: 1
 Score = 57.0 bits (136), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 72/266 (27%), Positives = 107/266 (40%), Gaps = 54/266 (20%)
Query: 25  AVDFVFNGFN--SSNLSLYGTATVESR-ILTLTNSTTF-----TIGRALYPSKIPTKRPN 76
           +  F F  FN   +NL L   A V S   L LT          ++GRALY +  P    +
Sbjct: 3   STSFSFTNFNPNQNNLILQEDALVNSAGTLELTAVAAGAPVPDSLGRALYAA--PIHIHD 60
Query: 77  SSYVYPFSTSFIFAMAPYKGVLAGHGLVFLFVPFHGIKGATEAQHLGLF-NRTNDGNSSN 135
           ++ +  F+TSF F MA         GL F   P    +       LGLF +R +D  +S 
Sbjct: 61  NTTLASFTTSFSFVMAAPAAAAVADGLAFFLAP-PDTQPQARGGFLGLFADRAHD--ASY 117
Query: 136 HVFGVEFDVFKNQEFNDIDENHVGIDVNSLTSVSAHAAGYWPDNQXXXXXXXXXXXXXXX 195
               VEFD + N    D +  H+GID N + S                            
Sbjct: 118 QTVAVEFDTYSNAW--DPNYTHIGIDTNGIES---------------------------- 147
Query: 196 EKSFKELKLNNGKNYQVWIDYADSFINITMVEAGMKRPKRPL---LSVPLNLSGVLEDEM 252
            K      +  G+   + I Y  S      + A +  P       +S  ++L  +L + +
Sbjct: 148 -KKTTPFDMVYGEKANIVITYQAS---TKALAASLVFPVSQTSYAVSARVDLRDILPEYV 203
Query: 253 YVGFTAATG---QLVESHKILAWSFS 275
            VGF+A TG    +VE+H I++WSF+
Sbjct: 204 RVGFSATTGLNAGVVETHDIVSWSFA 229

>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 57.0 bits (136), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 50/180 (27%), Positives = 85/180 (47%), Gaps = 16/180 (8%)
Query: 392 IAVKRISHENDGGTRAFLA--EISSLGRLKHKSLVGLRGWCKREKG--SLMLVYDYME-- 445
           +A+K++S      T A  A  E+  +  + HK+++GL      +K       VY  ME  
Sbjct: 52  VAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM 111
Query: 446 NGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEM 505
           + +L + I      M L  E    +L  +  G+ +LH      ++HRD+K SN+++  + 
Sbjct: 112 DANLSQVI-----QMELDHERMSYLLYQMLVGIKHLHSA---GIIHRDLKPSNIVVKSDA 163
Query: 506 NGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSG 565
             ++ DFGLAR  G   +   T  V T  Y APEV          D++  G+++ E++ G
Sbjct: 164 TLKILDFGLARTAGTSFM--MTPYVVTRYYRAPEVILGMGYKENVDIWSVGVIMGEMIKG 221

>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor And Isoquinolinedione Inhibitor Length = 308

Iteration: 1
 Score = 57.0 bits (136), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 55/263 (20%), Positives = 119/263 (45%), Gaps = 30/263 (11%)
Query: 392 IAVKRISHENDGGTR-AFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLD 450
           +A+K ++       R  FL E S +       +V L G   + + +L ++ + M  G L 
Sbjct: 52  VAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTL-VIMELMTRGDLK 110
Query: 451 KWIFQCDGSMM-------LSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDK 503
            ++      M         S  + I++  ++A G+ YL+     K +HRD+ + N ++ +
Sbjct: 111 SYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAE 167
Query: 504 EMNGRLGDFGLAR-MHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEV 562
           +   ++GDFG+ R +          + +  V +++PE    G  +T +DV+ FG+++ E+
Sbjct: 168 DFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 227
Query: 563 LSGRRPIEEGKPNLVEMVWELMVQGKXXXXXXXXXXXKGGFDEDE--VERVLHLGLLCAY 620
            +      +G  N  E V   +++G             G  D+ +   + +  L  +C  
Sbjct: 228 ATLAEQPYQGLSN--EQVLRFVMEG-------------GLLDKPDNCPDMLFELMRMCWQ 272
Query: 621 PDPRARPTMRQVVKVLEGKIEAG 643
            +P+ RP+  +++  ++ ++E G
Sbjct: 273 YNPKMRPSFLEIISSIKEEMEPG 295

>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum, Cgd2_1960 Length = 388

Iteration: 1
 Score = 57.0 bits (136), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 56/216 (25%), Positives = 98/216 (45%), Gaps = 34/216 (15%)
Query: 389 GAEIAVKRI--SHENDGGTRAFLAEISSLGRLK-HKSLVGLRGWCKREKG-SLMLVYDYM 444
           G  +AVK+I  + +N    +    EI  L  L  H+++V L    + +    + LV+DYM
Sbjct: 34  GEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRDVYLVFDYM 93
Query: 445 ENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKE 504
           E       +     + +L    +  V+  +   + YLH G    +LHRD+K SN+LL+ E
Sbjct: 94  ETD-----LHAVIRANILEPVHKQYVVYQLIKVIKYLHSGG---LLHRDMKPSNILLNAE 145
Query: 505 MNGRLGDFGLARMHGHGQVAST--------------------TRVVGTVGYLAPEV-FSS 543
            + ++ DFGL+R   + +  +                     T  V T  Y APE+   S
Sbjct: 146 CHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGS 205
Query: 544 GRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEM 579
            + +   D++  G ++ E+L G +PI  G   + ++
Sbjct: 206 TKYTKGIDMWSLGCILGEILCG-KPIFPGSSTMNQL 240

>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin E804 Length = 313

Iteration: 1
 Score = 56.6 bits (135), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 45/154 (29%), Positives = 74/154 (48%), Gaps = 11/154 (7%)
Query: 418 LKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAG 477
           LKH ++V L      E+G   L++D +  G L + I         S  +    ++ +   
Sbjct: 78  LKHPNIVRLHDSIS-EEGHHYLIFDLVTGGELFEDIV---AREYYSEADASHCIQQILEA 133
Query: 478 VLYLHEGWEKKVLHRDIKSSNVLLDKEMNG---RLGDFGLARMHGHGQVASTTRVVGTVG 534
           VL+ H+     V+HRD+K  N+LL  ++ G   +L DFGLA +   G+  +     GT G
Sbjct: 134 VLHCHQ---MGVVHRDLKPENLLLASKLKGAAVKLADFGLA-IEVEGEQQAWFGFAGTPG 189
Query: 535 YLAPEVFSSGRASTQTDVFGFGILILEVLSGRRP 568
           YL+PEV          D++  G+++  +L G  P
Sbjct: 190 YLSPEVLRKDPYGKPVDLWACGVILYILLVGYPP 223

>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor Discovered Through Site-Directed Dynamic Tethering Length = 272

Iteration: 1
 Score = 56.6 bits (135), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 43/172 (25%), Positives = 77/172 (44%), Gaps = 12/172 (6%)
Query: 400 ENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGS 459
           E  G       E+     L+H +++ L G+   +   + L+ +Y   G+    +++    
Sbjct: 51  EKAGVEHQLRREVEIQSHLRHPNILRLYGYF-HDATRVYLILEYAPLGT----VYRELQK 105
Query: 460 MMLSCEERIRV-LKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMH 518
           +    E+R    + ++A  + Y H    K+V+HRDIK  N+LL      ++ DFG +   
Sbjct: 106 LSRFDEQRTATYITELANALSYCHS---KRVIHRDIKPENLLLGSNGELKIADFGWS--- 159
Query: 519 GHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIE 570
            H   +    + GT+ YL PE+        + D++  G+L  E L G  P E
Sbjct: 160 VHAPSSRRDTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGMPPFE 211

>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase Length = 360

Iteration: 1
 Score = 56.2 bits (134), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 51/186 (27%), Positives = 90/186 (48%), Gaps = 20/186 (10%)
Query: 389 GAEIAVKRISHENDGGTRA--FLAEISSLGRLKHKSLVGL-----RGWCKREKGSLMLVY 441
           G  +AVK++S        A     E+  L  +KH++++GL           E   + LV 
Sbjct: 47  GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 106
Query: 442 DYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLL 501
             M  G+    I +C     L+ +    ++  +  G+ Y+H      ++HRD+K SN+ +
Sbjct: 107 HLM--GADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAV 158
Query: 502 DKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQT-DVFGFGILIL 560
           +++   ++ DFGLAR H   ++   T  V T  Y APE+  +     QT D++  G ++ 
Sbjct: 159 NEDCELKILDFGLAR-HTDDEM---TGYVATRWYRAPEIMLNAMHYNQTVDIWSVGCIMA 214
Query: 561 EVLSGR 566
           E+L+GR
Sbjct: 215 ELLTGR 220

>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2 Length = 361

Iteration: 1
 Score = 56.2 bits (134), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 53/190 (27%), Positives = 89/190 (46%), Gaps = 19/190 (10%)
Query: 389 GAEIAVKRISHENDGGTRAFLA------EISSLGRLKHKSLVGLRGWCKREKGSLMLVYD 442
           G E A K I       +R  +       E+S L ++ H +++ L       +  ++L+ +
Sbjct: 37  GLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHD-VYENRTDVVLILE 95
Query: 443 YMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNV-LL 501
            +  G L  ++ Q +    LS EE    +K +  GV YLH    KK+ H D+K  N+ LL
Sbjct: 96  LVSGGELFDFLAQKES---LSEEEATSFIKQILDGVNYLHT---KKIAHFDLKPENIMLL 149
Query: 502 DKEM---NGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGIL 558
           DK +   + +L DFGLA     G       + GT  ++APE+ +      + D++  G++
Sbjct: 150 DKNIPIPHIKLIDFGLAHEIEDG--VEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVI 207
Query: 559 ILEVLSGRRP 568
              +LSG  P
Sbjct: 208 TYILLSGASP 217

>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3, Tgme49_105860 Length = 467

Iteration: 1
 Score = 56.2 bits (134), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 54/188 (28%), Positives = 94/188 (50%), Gaps = 20/188 (10%)
Query: 389 GAEIAVKRISHENDGGTR---AFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYME 445
           GAE A+K I   +   T    A L E++ L +L H +++ L  + + +K +  LV +   
Sbjct: 29  GAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPNIMKLYEFFE-DKRNYYLVMEVYR 87
Query: 446 NGSL-DKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKE 504
            G L D+ I +       S  +   ++K V +G  YLH+     ++HRD+K  N+LL+ +
Sbjct: 88  GGELFDEIILR----QKFSEVDAAVIMKQVLSGTTYLHK---HNIVHRDLKPENLLLESK 140
Query: 505 MNG---RLGDFGLARMHGHGQVASTTR-VVGTVGYLAPEVFSSGRASTQTDVFGFGILIL 560
                 ++ DFGL+    H +V    +  +GT  Y+APEV    +   + DV+  G+++ 
Sbjct: 141 SRDALIKIVDFGLS---AHFEVGGKMKERLGTAYYIAPEVLRK-KYDEKCDVWSCGVILY 196
Query: 561 EVLSGRRP 568
            +L G  P
Sbjct: 197 ILLCGYPP 204

>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase Length = 330

Iteration: 1
 Score = 55.8 bits (133), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 72/251 (28%), Positives = 108/251 (43%), Gaps = 29/251 (11%)
Query: 391 EIAVKRISHENDGGTRAFLAEISSLGRL-KHKSLVGLRGWCKREKGSLMLVYDYMENGSL 449
           E AVK I    D   R    EI  L R  +H +++ L+      K  + LV + M  G L
Sbjct: 54  EYAVKVI----DKSKRDPSEEIEILLRYGQHPNIITLKDVYDDGK-HVYLVTELMRGGEL 108
Query: 450 -DKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVL-LDKEMNG 507
            DK + Q       S  E   VL  +   V YLH    + V+HRD+K SN+L +D+  N 
Sbjct: 109 LDKILRQ----KFFSEREASFVLHTIGKTVEYLHS---QGVVHRDLKPSNILYVDESGNP 161
Query: 508 ---RLGDFGLAR-MHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVL 563
              R+ DFG A+ +     +  T     T  ++APEV          D++  GIL+  +L
Sbjct: 162 ECLRICDFGFAKQLRAENGLLMTP--CYTANFVAPEVLKRQGYDEGCDIWSLGILLYTML 219
Query: 564 SGRRPIEEGKPNLVEMVWELMVQGKXXXXXXXXXXXKGGFDEDEVERVLHLGLLCAYPDP 623
           +G  P   G  +  E +   +  GK                +D V ++LH+       DP
Sbjct: 220 AGYTPFANGPSDTPEEILTRIGSGKFTLSGGNWNTVSETA-KDLVSKMLHV-------DP 271
Query: 624 RARPTMRQVVK 634
             R T +QV++
Sbjct: 272 HQRLTAKQVLQ 282

>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone Morp Protein Receptor Type-1b (Bmpr1b) In Complex With Fkbp12 An 193189 Length = 337

Iteration: 1
 Score = 55.8 bits (133), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 50/182 (27%), Positives = 84/182 (46%), Gaps = 27/182 (14%)
Query: 410 AEISSLGRLKHKSLVGLRGWCKREKGS---LMLVYDYMENGSLDKWIFQCDGSMMLSCEE 466
            EI     ++H++++G      +  GS   L L+ DY ENGSL  ++     S  L  + 
Sbjct: 80  TEIYQTVLMRHENILGFIAADIKGTGSWTQLYLITDYHENGSLYDYL----KSTTLDAKS 135
Query: 467 RIRVLKDVAAGVLYLH------EGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMH-- 518
            +++     +G+ +LH      +G +  + HRD+KS N+L+ K     + D GLA     
Sbjct: 136 MLKLAYSSVSGLCHLHTEIFSTQG-KPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFIS 194
Query: 519 --GHGQVASTTRVVGTVGYLAPEVFSSG------RASTQTDVFGFGILILEVLSGRRPIE 570
                 +   TR VGT  Y+ PEV          ++    D++ FG+++ EV   RR + 
Sbjct: 195 DTNEVDIPPNTR-VGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEV--ARRCVS 251
Query: 571 EG 572
            G
Sbjct: 252 GG 253

>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7 Length = 353

Iteration: 1
 Score = 55.8 bits (133), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 48/179 (26%), Positives = 81/179 (45%), Gaps = 23/179 (12%)
Query: 409 LAEISSLGRLKHKSLVGLRGWCKREK----GSLMLVYDYMENGSLDKWIFQCDGSMMLSC 464
           L EI  L   KH++++ +    + +       + ++ + M+       + +   + MLS 
Sbjct: 57  LREIKILKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTD-----LHRVISTQMLSD 111
Query: 465 EERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARM------- 517
           +     +      V  LH      V+HRD+K SN+L++   + ++ DFGLAR+       
Sbjct: 112 DHIQYFIYQTLRAVKVLHGS---NVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAAD 168
Query: 518 --HGHGQVASTTRVVGTVGYLAPEV-FSSGRASTQTDVFGFGILILEVLSGRRPIEEGK 573
                GQ +     V T  Y APEV  +S + S   DV+  G ++ E L  RRPI  G+
Sbjct: 169 NSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAE-LFLRRPIFPGR 226

>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 Length = 292

Iteration: 1
 Score = 55.8 bits (133), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 44/184 (23%), Positives = 84/184 (45%), Gaps = 9/184 (4%)
Query: 385 LEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYM 444
           +   G  +AVK++             E+  +   +H+++V +          L +V +++
Sbjct: 41  VRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYN-SYLVGDELWVVMEFL 99
Query: 445 ENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKE 504
           E G+L   +        ++ E+   V   V   +  LH    + V+HRDIKS ++LL  +
Sbjct: 100 EGGALTDIVTHTR----MNEEQIAAVCLAVLQALSVLHA---QGVIHRDIKSDSILLTHD 152
Query: 505 MNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLS 564
              +L DFG        +V     +VGT  ++APE+ S      + D++  GI+++E++ 
Sbjct: 153 GRVKLSDFGFC-AQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVD 211
Query: 565 GRRP 568
           G  P
Sbjct: 212 GEPP 215

>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain In Complex With A Monocyclic Pyrazolone Inhibitor Length = 360

Iteration: 1
 Score = 55.8 bits (133), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 51/186 (27%), Positives = 90/186 (48%), Gaps = 20/186 (10%)
Query: 389 GAEIAVKRISHENDGGTRA--FLAEISSLGRLKHKSLVGL-----RGWCKREKGSLMLVY 441
           G  +AVK++S        A     E+  L  +KH++++GL           E   + LV 
Sbjct: 47  GHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 106
Query: 442 DYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLL 501
             M  G+    I +C     L+ +    ++  +  G+ Y+H      ++HRD+K SN+ +
Sbjct: 107 HLM--GADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAV 158
Query: 502 DKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQT-DVFGFGILIL 560
           +++   ++ DFGLAR H   ++A     V T  Y APE+  +     QT D++  G ++ 
Sbjct: 159 NEDCELKILDFGLAR-HTDDEMAG---FVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMA 214
Query: 561 EVLSGR 566
           E+L+GR
Sbjct: 215 ELLTGR 220

>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In Complex With A Consensus Peptide Length = 301

Iteration: 1
 Score = 55.8 bits (133), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 44/184 (23%), Positives = 84/184 (45%), Gaps = 9/184 (4%)
Query: 385 LEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYM 444
           +   G  +AVK++             E+  +   +H+++V +          L +V +++
Sbjct: 50  VRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYN-SYLVGDELWVVMEFL 108
Query: 445 ENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKE 504
           E G+L   +        ++ E+   V   V   +  LH    + V+HRDIKS ++LL  +
Sbjct: 109 EGGALTDIVTHTR----MNEEQIAAVCLAVLQALSVLHA---QGVIHRDIKSDSILLTHD 161
Query: 505 MNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLS 564
              +L DFG        +V     +VGT  ++APE+ S      + D++  GI+++E++ 
Sbjct: 162 GRVKLSDFGFC-AQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVD 220
Query: 565 GRRP 568
           G  P
Sbjct: 221 GEPP 224

>pdb|2E7Q|A Chain A, Crystal Structure Of Basic Winged Bean Lectin In Complex With B Blood Group Trisaccharide Length = 237

Iteration: 1
 Score = 55.8 bits (133), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 74/269 (27%), Positives = 105/269 (39%), Gaps = 56/269 (20%)
Query: 25  AVDFVFNGF--NSSNLSLYGTATVESR-ILTLTN-----STTFTIGRALYPSKIPTKRPN 76
            + F FN F  N   L L   A + S  +L LT       T  + GRALY   +      
Sbjct: 2   TISFNFNQFHQNEEQLKLQRDARISSNSVLELTKVVNGVPTWNSTGRALYAKPVQVWDST 61
Query: 77  SSYVYPFSTSFIFAM-APYKGVLAGHGLVFLFVPFHGIKGATEAQHLGLFNRTNDGNSSN 135
           +  V  F T F F++  P+       GLVF   P +   G     + G++N      S  
Sbjct: 62  TGNVASFETRFSFSIRQPFPRPHPADGLVFFIAPPNTQTGE-GGGYFGIYNPL----SPY 116
Query: 136 HVFGVEFDVFKNQEFNDIDENHVGIDVNSLTSVSAHAAGYWPDNQXXXXXXXXXXXXXXX 195
               VEFD F+N    D    H+GIDVNS+ S                            
Sbjct: 117 PFVAVEFDTFRNTW--DPQIPHIGIDVNSVISTKT------------------------- 149
Query: 196 EKSFKELKLNNGKNYQVWIDYADS--FINITMVEAGMKRPKRPLLSVPLNLSGVLEDEMY 253
                   L+NG    V I Y  S   +++ +V   +       ++  ++L  VL + + 
Sbjct: 150 ----VPFTLDNGGIANVVIKYDASTKILHVVLVFPSLGTIYT--IADIVDLKQVLPESVN 203
Query: 254 VGFTAATG-------QLVESHKILAWSFS 275
           VGF+AATG          E+H IL+WSFS
Sbjct: 204 VGFSAATGDPSGKQRNATETHDILSWSFS 232

>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38) Length = 360

Iteration: 1
 Score = 55.8 bits (133), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 51/186 (27%), Positives = 90/186 (48%), Gaps = 20/186 (10%)
Query: 389 GAEIAVKRISHENDGGTRA--FLAEISSLGRLKHKSLVGL-----RGWCKREKGSLMLVY 441
           G  +AVK++S        A     E+  L  +KH++++GL           E   + LV 
Sbjct: 47  GHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 106
Query: 442 DYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLL 501
             M  G+    I +C     L+ +    ++  +  G+ Y+H      ++HRD+K SN+ +
Sbjct: 107 HLM--GADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAV 158
Query: 502 DKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQT-DVFGFGILIL 560
           +++   ++ DFGLAR H   ++A     V T  Y APE+  +     QT D++  G ++ 
Sbjct: 159 NEDCELKILDFGLAR-HTDDEMAG---FVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMA 214
Query: 561 EVLSGR 566
           E+L+GR
Sbjct: 215 ELLTGR 220

>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 55.8 bits (133), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 50/180 (27%), Positives = 84/180 (46%), Gaps = 16/180 (8%)
Query: 392 IAVKRISHENDGGTRAFLA--EISSLGRLKHKSLVGLRGWCKREKG--SLMLVYDYME-- 445
           +A+K++S      T A  A  E+  +  + HK+++GL      +K       VY  ME  
Sbjct: 52  VAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM 111
Query: 446 NGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEM 505
           + +L + I      M L  E    +L  +  G+ +LH      ++HRD+K SN+++  + 
Sbjct: 112 DANLSQVI-----QMELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDA 163
Query: 506 NGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSG 565
             ++ DFGLAR  G   +   T  V T  Y APEV          D++  G ++ E++ G
Sbjct: 164 TLKILDFGLARTAGTSFM--MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221

>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 55.8 bits (133), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 50/180 (27%), Positives = 84/180 (46%), Gaps = 16/180 (8%)
Query: 392 IAVKRISHENDGGTRAFLA--EISSLGRLKHKSLVGLRGWCKREKG--SLMLVYDYME-- 445
           +A+K++S      T A  A  E+  +  + HK+++GL      +K       VY  ME  
Sbjct: 52  VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM 111
Query: 446 NGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEM 505
           + +L + I      M L  E    +L  +  G+ +LH      ++HRD+K SN+++  + 
Sbjct: 112 DANLSQVI-----QMELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDC 163
Query: 506 NGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSG 565
             ++ DFGLAR  G   +   T  V T  Y APEV          D++  G ++ E++ G
Sbjct: 164 TLKILDFGLARTAGTSFM--MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221

>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In Complex With Cgp74514a Length = 303

Iteration: 1
 Score = 55.8 bits (133), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 44/184 (23%), Positives = 84/184 (45%), Gaps = 9/184 (4%)
Query: 385 LEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYM 444
           +   G  +AVK++             E+  +   +H+++V +          L +V +++
Sbjct: 52  VRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYN-SYLVGDELWVVMEFL 110
Query: 445 ENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKE 504
           E G+L   +        ++ E+   V   V   +  LH    + V+HRDIKS ++LL  +
Sbjct: 111 EGGALTDIVTHTR----MNEEQIAAVCLAVLQALSVLHA---QGVIHRDIKSDSILLTHD 163
Query: 505 MNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLS 564
              +L DFG        +V     +VGT  ++APE+ S      + D++  GI+++E++ 
Sbjct: 164 GRVKLSDFGFC-AQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVD 222
Query: 565 GRRP 568
           G  P
Sbjct: 223 GEPP 226

>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1 Length = 415

Iteration: 1
 Score = 55.8 bits (133), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 32/85 (37%), Positives = 47/85 (55%), Gaps = 7/85 (8%)
Query: 490 LHRDIKSSNVLLDKEMNGRLGDFG-LARMHGHGQVASTTRVVGTVGYLAPEVFSS----- 543
           +HRDIK  NVLLD   + RL DFG   +M+  G V S+   VGT  Y++PE+  +     
Sbjct: 197 VHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSV-AVGTPDYISPEILQAMEDGM 255
Query: 544 GRASTQTDVFGFGILILEVLSGRRP 568
           G+   + D +  G+ + E+L G  P
Sbjct: 256 GKYGPECDWWSLGVCMYEMLYGETP 280

>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In Complex With Pf-03758309 Length = 296

Iteration: 1
 Score = 55.8 bits (133), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 44/184 (23%), Positives = 84/184 (45%), Gaps = 9/184 (4%)
Query: 385 LEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYM 444
           +   G  +AVK++             E+  +   +H+++V +          L +V +++
Sbjct: 45  VRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYN-SYLVGDELWVVMEFL 103
Query: 445 ENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKE 504
           E G+L   +        ++ E+   V   V   +  LH    + V+HRDIKS ++LL  +
Sbjct: 104 EGGALTDIVTHTR----MNEEQIAAVCLAVLQALSVLHA---QGVIHRDIKSDSILLTHD 156
Query: 505 MNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLS 564
              +L DFG        +V     +VGT  ++APE+ S      + D++  GI+++E++ 
Sbjct: 157 GRVKLSDFGFC-AQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVD 215
Query: 565 GRRP 568
           G  P
Sbjct: 216 GEPP 219

>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil Length = 433

Iteration: 1
 Score = 55.8 bits (133), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 32/85 (37%), Positives = 47/85 (55%), Gaps = 7/85 (8%)
Query: 490 LHRDIKSSNVLLDKEMNGRLGDFG-LARMHGHGQVASTTRVVGTVGYLAPEVFSS----- 543
           +HRDIK  NVLLD   + RL DFG   +M+  G V S+   VGT  Y++PE+  +     
Sbjct: 213 VHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSV-AVGTPDYISPEILQAMEDGM 271
Query: 544 GRASTQTDVFGFGILILEVLSGRRP 568
           G+   + D +  G+ + E+L G  P
Sbjct: 272 GKYGPECDWWSLGVCMYEMLYGETP 296

>pdb|2EIG|A Chain A, Lotus Tetragonolobus Seed Lectin (Isoform) Length = 234

Iteration: 1
 Score = 55.8 bits (133), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 60/223 (26%), Positives = 94/223 (42%), Gaps = 40/223 (17%)
Query: 60  TIGRALYPSKIPTKRPNSSYVYPFSTSFIFAMAPYKGVLAGHGLVFLFVPF-HGIKGATE 118
           T   ALY + +P     +  V  F TSF F ++  +      G+VF   P+   I   ++
Sbjct: 39  TTSHALYATPVPIWDSATGNVASFITSFSFIVSNVQRYPPTDGVVFFLAPWGTEIPPNSQ 98
Query: 119 AQHLGLFNRTNDGNSSNHVFGVEFDVFKN-QEFNDIDENHVGIDVNSLTSVSAHAAGYWP 177
             +LG+   T+  NS N    VEFD   N  +   +  +H+GIDVNS+ S+         
Sbjct: 99  GGYLGI---TDSSNSQNQFVAVEFDSHPNVWDPKSLRSSHIGIDVNSIMSL--------- 146
Query: 178 DNQXXXXXXXXXXXXXXXEKSFKELKLN--NGKNYQVWIDYADSFINITMVEAGMKRPKR 235
                                 K +  N  +G   +  I Y DS   I  V    +  + 
Sbjct: 147 ----------------------KAVNWNRVSGSLEKATIIY-DSDTKILTVVMTHQNGQI 183
Query: 236 PLLSVPLNLSGVLEDEMYVGFTAAT-GQLVESHKILAWSFSNT 277
             +S  ++L  VL +++ VGF+A T     E H I +WSF++T
Sbjct: 184 TTISQEIDLKTVLPEKVSVGFSATTWNPERERHDIYSWSFTST 226

>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With Inhibitor Pg-874743 Length = 348

Iteration: 1
 Score = 55.8 bits (133), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 51/186 (27%), Positives = 90/186 (48%), Gaps = 20/186 (10%)
Query: 389 GAEIAVKRISHENDGGTRA--FLAEISSLGRLKHKSLVGL-----RGWCKREKGSLMLVY 441
           G  +AVK++S        A     E+  L  +KH++++GL           E   + LV 
Sbjct: 43  GHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 102
Query: 442 DYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLL 501
             M  G+    I +C     L+ +    ++  +  G+ Y+H      ++HRD+K SN+ +
Sbjct: 103 HLM--GADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAV 154
Query: 502 DKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQT-DVFGFGILIL 560
           +++   ++ DFGLAR H   ++A     V T  Y APE+  +     QT D++  G ++ 
Sbjct: 155 NEDCELKILDFGLAR-HTDDEMAG---FVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMA 210
Query: 561 EVLSGR 566
           E+L+GR
Sbjct: 211 ELLTGR 216

>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A Tetracyclic Pyridone Inhibitor (pyridone 6) Length = 304

Iteration: 1
 Score = 55.8 bits (133), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 51/193 (26%), Positives = 94/193 (48%), Gaps = 19/193 (9%)
Query: 386 EGGGAEIAVK-----RISHENDGGTRAFLA-EISSLGRLKHKSLVGLRGWCKREKGSLML 439
           +G G E A K     R+     G +R  +  E++ L  ++H +++ L    +  K  ++L
Sbjct: 48  KGTGKEYAAKFIKKRRLXSSRRGVSREEIEREVNILREIRHPNIITLHDIFEN-KTDVVL 106
Query: 440 VYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNV 499
           + + +  G L  ++ + +    L+ +E  + LK +  GV YLH    K++ H D+K  N+
Sbjct: 107 ILELVSGGELFDFLAEKES---LTEDEATQFLKQILDGVHYLHS---KRIAHFDLKPENI 160
Query: 500 -LLDKEMNG---RLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGF 555
            LLDK +     +L DFG+A     G       + GT  ++APE+ +      + D++  
Sbjct: 161 MLLDKNVPNPRIKLIDFGIAHKIEAGN--EFKNIFGTPEFVAPEIVNYEPLGLEADMWSI 218
Query: 556 GILILEVLSGRRP 568
           G++   +LSG  P
Sbjct: 219 GVITYILLSGASP 231

>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 55.5 bits (132), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 50/180 (27%), Positives = 84/180 (46%), Gaps = 16/180 (8%)
Query: 392 IAVKRISHENDGGTRAFLA--EISSLGRLKHKSLVGLRGWCKREKG--SLMLVYDYME-- 445
           +A+K++S      T A  A  E+  +  + HK+++GL      +K       VY  ME  
Sbjct: 52  VAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM 111
Query: 446 NGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEM 505
           + +L + I      M L  E    +L  +  G+ +LH      ++HRD+K SN+++  + 
Sbjct: 112 DANLSQVI-----QMELDHERMSYLLYQMLVGIKHLHSA---GIIHRDLKPSNIVVKSDA 163
Query: 506 NGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSG 565
             ++ DFGLAR  G   +   T  V T  Y APEV          D++  G ++ E++ G
Sbjct: 164 TLKILDFGLARTAGTSFM--MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221

>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 55.5 bits (132), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 50/180 (27%), Positives = 84/180 (46%), Gaps = 16/180 (8%)
Query: 392 IAVKRISHENDGGTRAFLA--EISSLGRLKHKSLVGLRGWCKREKG--SLMLVYDYME-- 445
           +A+K++S      T A  A  E+  +  + HK+++GL      +K       VY  ME  
Sbjct: 52  VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM 111
Query: 446 NGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEM 505
           + +L + I      M L  E    +L  +  G+ +LH      ++HRD+K SN+++  + 
Sbjct: 112 DANLSQVI-----QMELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDA 163
Query: 506 NGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSG 565
             ++ DFGLAR  G   +   T  V T  Y APEV          D++  G ++ E++ G
Sbjct: 164 TLKILDFGLARTAGTSFM--MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221

>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe Complex Structure Length = 406

Iteration: 1
 Score = 55.5 bits (132), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 32/85 (37%), Positives = 46/85 (54%), Gaps = 6/85 (7%)
Query: 490 LHRDIKSSNVLLDKEMNGRLGDFGLA-RMHGHGQVASTTRVVGTVGYLAPEVFSS----G 544
           +HRD+K  N+LLDK  + +L DFG   +M+  G V   T  VGT  Y++PEV  S    G
Sbjct: 195 IHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDT-AVGTPDYISPEVLKSQGGDG 253
Query: 545 RASTQTDVFGFGILILEVLSGRRPI 569
               + D +  G+ + E+L G  P 
Sbjct: 254 YYGRECDWWSVGVFLYEMLVGDTPF 278

>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex With Indazole Derivative (Compound 18) Length = 410

Iteration: 1
 Score = 55.5 bits (132), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 32/85 (37%), Positives = 46/85 (54%), Gaps = 6/85 (7%)
Query: 490 LHRDIKSSNVLLDKEMNGRLGDFGLA-RMHGHGQVASTTRVVGTVGYLAPEVFSS----G 544
           +HRD+K  N+LLDK  + +L DFG   +M+  G V   T  VGT  Y++PEV  S    G
Sbjct: 190 IHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDT-AVGTPDYISPEVLKSQGGDG 248
Query: 545 RASTQTDVFGFGILILEVLSGRRPI 569
               + D +  G+ + E+L G  P 
Sbjct: 249 YYGRECDWWSVGVFLYEMLVGDTPF 273

>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil Length = 415

Iteration: 1
 Score = 55.5 bits (132), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 32/85 (37%), Positives = 46/85 (54%), Gaps = 6/85 (7%)
Query: 490 LHRDIKSSNVLLDKEMNGRLGDFGLA-RMHGHGQVASTTRVVGTVGYLAPEVFSS----G 544
           +HRD+K  N+LLDK  + +L DFG   +M+  G V   T  VGT  Y++PEV  S    G
Sbjct: 195 IHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDT-AVGTPDYISPEVLKSQGGDG 253
Query: 545 RASTQTDVFGFGILILEVLSGRRPI 569
               + D +  G+ + E+L G  P 
Sbjct: 254 YYGRECDWWSVGVFLYEMLVGDTPF 278

>pdb|1WBL|A Chain A, Winged Bean Lectin Complexed With Methyl-Alpha-D-Galactose Length = 241

Iteration: 1
 Score = 55.5 bits (132), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 74/269 (27%), Positives = 105/269 (39%), Gaps = 56/269 (20%)
Query: 25  AVDFVFNGF--NSSNLSLYGTATVESR-ILTLTN-----STTFTIGRALYPSKIPTKRPN 76
            + F FN F  N   L L   A + S  +L LT       T  + GRALY   +      
Sbjct: 2   TISFNFNQFHQNEEQLKLQRDARISSNSVLELTKVVNGVPTWNSTGRALYAKPVQVWDST 61
Query: 77  SSYVYPFSTSFIFAM-APYKGVLAGHGLVFLFVPFHGIKGATEAQHLGLFNRTNDGNSSN 135
           +  V  F T F F++  P+       GLVF   P +   G     + G++N      S  
Sbjct: 62  TGNVASFETRFSFSIRQPFPRPHPADGLVFFIAPPNTQTGE-GGGYFGIYNPL----SPY 116
Query: 136 HVFGVEFDVFKNQEFNDIDENHVGIDVNSLTSVSAHAAGYWPDNQXXXXXXXXXXXXXXX 195
               VEFD F+N    D    H+GIDVNS+ S                            
Sbjct: 117 PFVAVEFDTFRNTW--DPQIPHIGIDVNSVISTKT------------------------- 149
Query: 196 EKSFKELKLNNGKNYQVWIDYADS--FINITMVEAGMKRPKRPLLSVPLNLSGVLEDEMY 253
                   L+NG    V I Y  S   +++ +V   +       ++  ++L  VL + + 
Sbjct: 150 ----VPFTLDNGGIANVVIKYDASTKILHVVLVFPSLGTIYT--IADIVDLKQVLPESVN 203
Query: 254 VGFTAATG-------QLVESHKILAWSFS 275
           VGF+AATG          E+H IL+WSFS
Sbjct: 204 VGFSAATGDPSGKQRNATETHDILSWSFS 232

>pdb|4FIE|A Chain A, Full-Length Human Pak4 Length = 423

Iteration: 1
 Score = 55.5 bits (132), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 37/132 (28%), Positives = 66/132 (50%), Gaps = 8/132 (6%)
Query: 437 LMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKS 496
           L +V +++E G+L   +        ++ E+   V   V   +  LH    + V+HRDIKS
Sbjct: 223 LWVVMEFLEGGALTDIVTHT----RMNEEQIAAVCLAVLQALSVLHA---QGVIHRDIKS 275
Query: 497 SNVLLDKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFG 556
            ++LL  +   +L DFG        +V     +VGT  ++APE+ S      + D++  G
Sbjct: 276 DSILLTHDGRVKLSDFGFC-AQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLG 334
Query: 557 ILILEVLSGRRP 568
           I+++E++ G  P
Sbjct: 335 IMVIEMVDGEPP 346

>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide Length = 346

Iteration: 1
 Score = 55.5 bits (132), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 44/184 (23%), Positives = 84/184 (45%), Gaps = 9/184 (4%)
Query: 385 LEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYM 444
           +   G  +AVK++             E+  +   +H+++V +          L +V +++
Sbjct: 95  VRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYN-SYLVGDELWVVMEFL 153
Query: 445 ENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKE 504
           E G+L   +        ++ E+   V   V   +  LH    + V+HRDIKS ++LL  +
Sbjct: 154 EGGALTDIVTHTR----MNEEQIAAVCLAVLQALSVLHA---QGVIHRDIKSDSILLTHD 206
Query: 505 MNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLS 564
              +L DFG        +V     +VGT  ++APE+ S      + D++  GI+++E++ 
Sbjct: 207 GRVKLSDFGFC-AQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVD 265
Query: 565 GRRP 568
           G  P
Sbjct: 266 GEPP 269

>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino( Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6- Difluoro-Phenyl)-Amide) Length = 349

Iteration: 1
 Score = 55.5 bits (132), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 45/161 (27%), Positives = 74/161 (45%), Gaps = 12/161 (7%)
Query: 411 EISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRV 470
           EI  L RL H +++ L+   +     + LV + +  G L   I +       S  +    
Sbjct: 98  EIGVLLRLSHPNIIKLKEIFETPT-EISLVLELVTGGELFDRIVE---KGYYSERDAADA 153
Query: 471 LKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDK---EMNGRLGDFGLARMHGHGQVASTT 527
           +K +   V YLHE     ++HRD+K  N+L      +   ++ DFGL+++  H  +  T 
Sbjct: 154 VKQILEAVAYLHEN---GIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQVLMKT- 209
Query: 528 RVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRP 568
            V GT GY APE+        + D++  GI+   +L G  P
Sbjct: 210 -VCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEP 249

>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha (Mrck Alpha) Length = 437

Iteration: 1
 Score = 55.5 bits (132), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 42/143 (29%), Positives = 69/143 (48%), Gaps = 12/143 (8%)
Query: 432 REKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLH 491
           ++  +L LV DY   G L   + + +  +    EE  R    +A  V+ +    +   +H
Sbjct: 144 QDDNNLYLVMDYYVGGDLLTLLSKFEDRLP---EEMARFY--LAEMVIAIDSVHQLHYVH 198
Query: 492 RDIKSSNVLLDKEMNGRLGDFG-LARMHGHGQVASTTRVVGTVGYLAPEVFSS-----GR 545
           RDIK  N+L+D   + RL DFG   ++   G V S+   VGT  Y++PE+  +     GR
Sbjct: 199 RDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQSSV-AVGTPDYISPEILQAMEGGKGR 257
Query: 546 ASTQTDVFGFGILILEVLSGRRP 568
              + D +  G+ + E+L G  P
Sbjct: 258 YGPECDWWSLGVCMYEMLYGETP 280

>pdb|1WBF|A Chain A, Winged Bean Lectin, Saccharide Free Form Length = 242

Iteration: 1
 Score = 55.5 bits (132), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 74/269 (27%), Positives = 105/269 (39%), Gaps = 56/269 (20%)
Query: 25  AVDFVFNGF--NSSNLSLYGTATVESR-ILTLTN-----STTFTIGRALYPSKIPTKRPN 76
            + F FN F  N   L L   A + S  +L LT       T  + GRALY   +      
Sbjct: 3   TISFNFNQFHQNEEQLKLQRDARISSNSVLELTKVVNGVPTWNSTGRALYAKPVQVWDST 62
Query: 77  SSYVYPFSTSFIFAM-APYKGVLAGHGLVFLFVPFHGIKGATEAQHLGLFNRTNDGNSSN 135
           +  V  F T F F++  P+       GLVF   P +   G     + G++N      S  
Sbjct: 63  TGNVASFETRFSFSIRQPFPRPHPADGLVFFIAPPNTQTGE-GGGYFGIYNPL----SPY 117
Query: 136 HVFGVEFDVFKNQEFNDIDENHVGIDVNSLTSVSAHAAGYWPDNQXXXXXXXXXXXXXXX 195
               VEFD F+N    D    H+GIDVNS+ S                            
Sbjct: 118 PFVAVEFDTFRNTW--DPQIPHIGIDVNSVISTKT------------------------- 150
Query: 196 EKSFKELKLNNGKNYQVWIDYADS--FINITMVEAGMKRPKRPLLSVPLNLSGVLEDEMY 253
                   L+NG    V I Y  S   +++ +V   +       ++  ++L  VL + + 
Sbjct: 151 ----VPFTLDNGGIANVVIKYDASTKILHVVLVFPSLGTIYT--IADIVDLKQVLPESVN 204
Query: 254 VGFTAATG-------QLVESHKILAWSFS 275
           VGF+AATG          E+H IL+WSFS
Sbjct: 205 VGFSAATGDPSGKQRNATETHDILSWSFS 233

>pdb|1FNY|A Chain A, Legume Lectin Of The Bark Of Robinia Pseudoacacia. Length = 237

Iteration: 1
 Score = 55.5 bits (132), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 64/245 (26%), Positives = 99/245 (40%), Gaps = 47/245 (19%)
Query: 42  GTATVESR-ILTLTN-----STTFTIGRALYPSKIPTKRPNSSYVYPFSTSFIFAMAPYK 95
           G A V S  +L LTN      ++ ++GRALY +        +  V  F TSF F +    
Sbjct: 22  GDALVTSTGVLQLTNVVNGVPSSKSLGRALYAAPFQIWDSTTGNVASFVTSFTFIIQAPN 81
Query: 96  GVLAGHGLVFLFVPFHGIKGATEAQHL-GLFNRTNDG--NSSNHVFGVEFDVFKNQEFND 152
                 GL F   P       T+   L G+     DG  N SN +  VEFD F N ++ D
Sbjct: 82  PATTADGLAFFLAPVD-----TQPLDLGGMLGIFKDGYFNKSNQIVAVEFDTFSNGDW-D 135
Query: 153 IDENHVGIDVNSLTSVSAHAAGYWPDNQXXXXXXXXXXXXXXXEKSFKELKLNNGKNYQV 212
               H+GI+VNS+ S+      +                              NG+   V
Sbjct: 136 PKGRHLGINVNSIESIKTVPWNW-----------------------------TNGEVANV 166
Query: 213 WIDYADSFINITMVEAGMKRPKRPLLSVPLNLSGVLEDEMYVGFTAATG---QLVESHKI 269
           +I Y  S  ++T            ++   +++  VL + +  GF+A TG     V+++ +
Sbjct: 167 FISYEASTKSLTASLVYPSLETSFIIDAIVDVKIVLPEWVRFGFSATTGIDKGYVQTNDV 226
Query: 270 LAWSF 274
           L+WSF
Sbjct: 227 LSWSF 231

>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex With Amp-Pnp Length = 344

Iteration: 1
 Score = 55.5 bits (132), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 49/183 (26%), Positives = 88/183 (48%), Gaps = 11/183 (6%)
Query: 386 EGGGAEIAVKRISHENDGGTRAFLA---EISSLGRLKHKSLVGLRGWCKREKGSLMLVYD 442
           EG   +I V     E+  G ++F A    + ++G L H  +V L G C     SL LV  
Sbjct: 55  EGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCP--GSSLQLVTQ 112
Query: 443 YMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLD 502
           Y+  GSL   + Q  G+  L  +  +     +A G+ YL E     ++HR++ + NVLL 
Sbjct: 113 YLPLGSLLDHVRQHRGA--LGPQLLLNWGVQIAKGMYYLEE---HGMVHRNLAARNVLLK 167
Query: 503 KEMNGRLGDFGLAR-MHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILE 561
                ++ DFG+A  +    +    +     + ++A E    G+ + Q+DV+ +G+ + E
Sbjct: 168 SPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWE 227
Query: 562 VLS 564
           +++
Sbjct: 228 LMT 230

>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195 Length = 365

Iteration: 1
 Score = 55.5 bits (132), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 51/186 (27%), Positives = 90/186 (48%), Gaps = 20/186 (10%)
Query: 389 GAEIAVKRISHENDGGTRA--FLAEISSLGRLKHKSLVGL-----RGWCKREKGSLMLVY 441
           G  +AVK++S        A     E+  L  +KH++++GL           E   + LV 
Sbjct: 52  GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 111
Query: 442 DYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLL 501
             M  G+    I +C     L+ +    ++  +  G+ Y+H      ++HRD+K SN+ +
Sbjct: 112 HLM--GADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAV 163
Query: 502 DKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQT-DVFGFGILIL 560
           +++   ++ DFGLAR H   ++   T  V T  Y APE+  +     QT D++  G ++ 
Sbjct: 164 NEDXELKILDFGLAR-HTDDEM---TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMA 219
Query: 561 EVLSGR 566
           E+L+GR
Sbjct: 220 ELLTGR 225

>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase Iib Isoform 1 (camk2b) Length = 295

Iteration: 1
 Score = 55.5 bits (132), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 48/167 (28%), Positives = 78/167 (46%), Gaps = 12/167 (7%)
Query: 418 LKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAG 477
           LKH ++V L      E+G   LV+D +  G L + I         S  +    ++ +   
Sbjct: 60  LKHSNIVRLHD-SISEEGFHYLVFDLVTGGELFEDIV---AREYYSEADASHCIQQILEA 115
Query: 478 VLYLHEGWEKKVLHRDIKSSNVLLDKEMNG---RLGDFGLARMHGHGQVASTTRVVGTVG 534
           VL+ H+     V+HRD+K  N+LL  +  G   +L DFGLA +   G   +     GT G
Sbjct: 116 VLHCHQ---MGVVHRDLKPENLLLASKCKGAAVKLADFGLA-IEVQGDQQAWFGFAGTPG 171
Query: 535 YLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPI-EEGKPNLVEMV 580
           YL+PEV          D++  G+++  +L G  P  +E +  L + +
Sbjct: 172 YLSPEVLRKEAYGKPVDIWACGVILYILLVGYPPFWDEDQHKLYQQI 218

>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex With Dp802 Length = 354

Iteration: 1
 Score = 55.5 bits (132), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 51/186 (27%), Positives = 90/186 (48%), Gaps = 20/186 (10%)
Query: 389 GAEIAVKRISHENDGGTRA--FLAEISSLGRLKHKSLVGL-----RGWCKREKGSLMLVY 441
           G  +AVK++S        A     E+  L  +KH++++GL           E   + LV 
Sbjct: 47  GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 106
Query: 442 DYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLL 501
             M  G+    I +C     L+ +    ++  +  G+ Y+H      ++HRD+K SN+ +
Sbjct: 107 HLM--GADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAV 158
Query: 502 DKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQT-DVFGFGILIL 560
           +++   ++ DFGLAR H   ++   T  V T  Y APE+  +     QT D++  G ++ 
Sbjct: 159 NEDCELKILDFGLAR-HTDDEM---TGXVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMA 214
Query: 561 EVLSGR 566
           E+L+GR
Sbjct: 215 ELLTGR 220

>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine Length = 365

Iteration: 1
 Score = 55.5 bits (132), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 51/186 (27%), Positives = 90/186 (48%), Gaps = 20/186 (10%)
Query: 389 GAEIAVKRISHENDGGTRA--FLAEISSLGRLKHKSLVGL-----RGWCKREKGSLMLVY 441
           G  +AVK++S        A     E+  L  +KH++++GL           E   + LV 
Sbjct: 52  GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 111
Query: 442 DYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLL 501
             M  G+    I +C     L+ +    ++  +  G+ Y+H      ++HRD+K SN+ +
Sbjct: 112 HLM--GADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAV 163
Query: 502 DKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQT-DVFGFGILIL 560
           +++   ++ DFGLAR H   ++   T  V T  Y APE+  +     QT D++  G ++ 
Sbjct: 164 NEDXELKILDFGLAR-HTDDEM---TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMA 219
Query: 561 EVLSGR 566
           E+L+GR
Sbjct: 220 ELLTGR 225

>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase Length = 362

Iteration: 1
 Score = 55.1 bits (131), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 51/186 (27%), Positives = 90/186 (48%), Gaps = 20/186 (10%)
Query: 389 GAEIAVKRISHENDGGTRA--FLAEISSLGRLKHKSLVGL-----RGWCKREKGSLMLVY 441
           G  +AVK++S        A     E+  L  +KH++++GL           E   + LV 
Sbjct: 49  GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 108
Query: 442 DYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLL 501
             M  G+    I +C     L+ +    ++  +  G+ Y+H      ++HRD+K SN+ +
Sbjct: 109 HLM--GADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAV 160
Query: 502 DKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQT-DVFGFGILIL 560
           +++   ++ DFGLAR H   ++   T  V T  Y APE+  +     QT D++  G ++ 
Sbjct: 161 NEDCELKILDFGLAR-HTDDEM---TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMA 216
Query: 561 EVLSGR 566
           E+L+GR
Sbjct: 217 ELLTGR 222

>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine Length = 351

Iteration: 1
 Score = 55.1 bits (131), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 51/186 (27%), Positives = 90/186 (48%), Gaps = 20/186 (10%)
Query: 389 GAEIAVKRISHENDGGTRA--FLAEISSLGRLKHKSLVGL-----RGWCKREKGSLMLVY 441
           G  +AVK++S        A     E+  L  +KH++++GL           E   + LV 
Sbjct: 44  GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 103
Query: 442 DYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLL 501
             M  G+    I +C     L+ +    ++  +  G+ Y+H      ++HRD+K SN+ +
Sbjct: 104 HLM--GADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAV 155
Query: 502 DKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQT-DVFGFGILIL 560
           +++   ++ DFGLAR H   ++   T  V T  Y APE+  +     QT D++  G ++ 
Sbjct: 156 NEDCELKILDFGLAR-HTDDEM---TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMA 211
Query: 561 EVLSGR 566
           E+L+GR
Sbjct: 212 ELLTGR 217

>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In Complex With Ca2+ And Amppnp Length = 494

Iteration: 1
 Score = 55.1 bits (131), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 48/180 (26%), Positives = 90/180 (50%), Gaps = 13/180 (7%)
Query: 392 IAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDK 451
           I + R +  +       L E++ L  L H +++ L  + + +K +  LV +  + G L  
Sbjct: 67  IKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFE-DKRNYYLVMECYKGGELFD 125
Query: 452 WIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLD-KEMNG--R 508
            I      M  +  +   ++K V +GV YLH+     ++HRD+K  N+LL+ KE +   +
Sbjct: 126 EIIH---RMKFNEVDAAVIIKQVLSGVTYLHK---HNIVHRDLKPENLLLESKEKDALIK 179
Query: 509 LGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRP 568
           + DFGL+ +  + +       +GT  Y+APEV    +   + DV+  G+++  +L+G  P
Sbjct: 180 IVDFGLSAVFENQK--KMKERLGTAYYIAPEVLRK-KYDEKCDVWSIGVILFILLAGYPP 236

>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea Length = 365

Iteration: 1
 Score = 55.1 bits (131), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 51/186 (27%), Positives = 90/186 (48%), Gaps = 20/186 (10%)
Query: 389 GAEIAVKRISHENDGGTRA--FLAEISSLGRLKHKSLVGL-----RGWCKREKGSLMLVY 441
           G  +AVK++S        A     E+  L  +KH++++GL           E   + LV 
Sbjct: 52  GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 111
Query: 442 DYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLL 501
             M  G+    I +C     L+ +    ++  +  G+ Y+H      ++HRD+K SN+ +
Sbjct: 112 HLM--GADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAV 163
Query: 502 DKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQT-DVFGFGILIL 560
           +++   ++ DFGLAR H   ++   T  V T  Y APE+  +     QT D++  G ++ 
Sbjct: 164 NEDCELKILDFGLAR-HTDDEM---TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMA 219
Query: 561 EVLSGR 566
           E+L+GR
Sbjct: 220 ELLTGR 225

>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376 Length = 354

Iteration: 1
 Score = 55.1 bits (131), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 51/186 (27%), Positives = 90/186 (48%), Gaps = 20/186 (10%)
Query: 389 GAEIAVKRISHENDGGTRA--FLAEISSLGRLKHKSLVGL-----RGWCKREKGSLMLVY 441
           G  +AVK++S        A     E+  L  +KH++++GL           E   + LV 
Sbjct: 47  GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 106
Query: 442 DYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLL 501
             M  G+    I +C     L+ +    ++  +  G+ Y+H      ++HRD+K SN+ +
Sbjct: 107 HLM--GADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAV 158
Query: 502 DKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQT-DVFGFGILIL 560
           +++   ++ DFGLAR H   ++   T  V T  Y APE+  +     QT D++  G ++ 
Sbjct: 159 NEDCELKILDFGLAR-HTDDEM---TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMA 214
Query: 561 EVLSGR 566
           E+L+GR
Sbjct: 215 ELLTGR 220

>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small Molecule Inhibitor Length = 359

Iteration: 1
 Score = 55.1 bits (131), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 51/186 (27%), Positives = 90/186 (48%), Gaps = 20/186 (10%)
Query: 389 GAEIAVKRISHENDGGTRA--FLAEISSLGRLKHKSLVGL-----RGWCKREKGSLMLVY 441
           G  +AVK++S        A     E+  L  +KH++++GL           E   + LV 
Sbjct: 46  GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 105
Query: 442 DYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLL 501
             M  G+    I +C     L+ +    ++  +  G+ Y+H      ++HRD+K SN+ +
Sbjct: 106 HLM--GADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAV 157
Query: 502 DKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQT-DVFGFGILIL 560
           +++   ++ DFGLAR H   ++   T  V T  Y APE+  +     QT D++  G ++ 
Sbjct: 158 NEDCELKILDFGLAR-HTDDEM---TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMA 213
Query: 561 EVLSGR 566
           E+L+GR
Sbjct: 214 ELLTGR 219

>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715 Length = 362

Iteration: 1
 Score = 55.1 bits (131), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 51/186 (27%), Positives = 90/186 (48%), Gaps = 20/186 (10%)
Query: 389 GAEIAVKRISHENDGGTRA--FLAEISSLGRLKHKSLVGL-----RGWCKREKGSLMLVY 441
           G  +AVK++S        A     E+  L  +KH++++GL           E   + LV 
Sbjct: 49  GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 108
Query: 442 DYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLL 501
             M  G+    I +C     L+ +    ++  +  G+ Y+H      ++HRD+K SN+ +
Sbjct: 109 HLM--GADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAV 160
Query: 502 DKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQT-DVFGFGILIL 560
           +++   ++ DFGLAR H   ++   T  V T  Y APE+  +     QT D++  G ++ 
Sbjct: 161 NEDCELKILDFGLAR-HTDDEM---TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMA 216
Query: 561 EVLSGR 566
           E+L+GR
Sbjct: 217 ELLTGR 222

>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In Complex With 4-[3-Methylsulfanylanilino]-6,7- Dimethoxyquinazoline Length = 360

Iteration: 1
 Score = 55.1 bits (131), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 51/186 (27%), Positives = 90/186 (48%), Gaps = 20/186 (10%)
Query: 389 GAEIAVKRISHENDGGTRA--FLAEISSLGRLKHKSLVGL-----RGWCKREKGSLMLVY 441
           G  +AVK++S        A     E+  L  +KH++++GL           E   + LV 
Sbjct: 47  GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 106
Query: 442 DYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLL 501
             M  G+    I +C     L+ +    ++  +  G+ Y+H      ++HRD+K SN+ +
Sbjct: 107 HLM--GADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAV 158
Query: 502 DKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQT-DVFGFGILIL 560
           +++   ++ DFGLAR H   ++   T  V T  Y APE+  +     QT D++  G ++ 
Sbjct: 159 NEDCELKILDFGLAR-HTDDEM---TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMA 214
Query: 561 EVLSGR 566
           E+L+GR
Sbjct: 215 ELLTGR 220

>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE COMPLEX IN Solution Length = 359

Iteration: 1
 Score = 55.1 bits (131), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 51/186 (27%), Positives = 90/186 (48%), Gaps = 20/186 (10%)
Query: 389 GAEIAVKRISHENDGGTRA--FLAEISSLGRLKHKSLVGL-----RGWCKREKGSLMLVY 441
           G  +AVK++S        A     E+  L  +KH++++GL           E   + LV 
Sbjct: 52  GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 111
Query: 442 DYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLL 501
             M  G+    I +C     L+ +    ++  +  G+ Y+H      ++HRD+K SN+ +
Sbjct: 112 HLM--GADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAV 163
Query: 502 DKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQT-DVFGFGILIL 560
           +++   ++ DFGLAR H   ++   T  V T  Y APE+  +     QT D++  G ++ 
Sbjct: 164 NEDCELKILDFGLAR-HTDDEM---TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMA 219
Query: 561 EVLSGR 566
           E+L+GR
Sbjct: 220 ELLTGR 225

>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex Length = 366

Iteration: 1
 Score = 55.1 bits (131), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 51/186 (27%), Positives = 90/186 (48%), Gaps = 20/186 (10%)
Query: 389 GAEIAVKRISHENDGGTRA--FLAEISSLGRLKHKSLVGL-----RGWCKREKGSLMLVY 441
           G  +AVK++S        A     E+  L  +KH++++GL           E   + LV 
Sbjct: 53  GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 112
Query: 442 DYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLL 501
             M  G+    I +C     L+ +    ++  +  G+ Y+H      ++HRD+K SN+ +
Sbjct: 113 HLM--GADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAV 164
Query: 502 DKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQT-DVFGFGILIL 560
           +++   ++ DFGLAR H   ++   T  V T  Y APE+  +     QT D++  G ++ 
Sbjct: 165 NEDCELKILDFGLAR-HTDDEM---TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMA 220
Query: 561 EVLSGR 566
           E+L+GR
Sbjct: 221 ELLTGR 226

>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map Kinase Length = 360

Iteration: 1
 Score = 55.1 bits (131), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 51/186 (27%), Positives = 90/186 (48%), Gaps = 20/186 (10%)
Query: 389 GAEIAVKRISHENDGGTRA--FLAEISSLGRLKHKSLVGL-----RGWCKREKGSLMLVY 441
           G  +AVK++S        A     E+  L  +KH++++GL           E   + LV 
Sbjct: 47  GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 106
Query: 442 DYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLL 501
             M  G+    I +C     L+ +    ++  +  G+ Y+H      ++HRD+K SN+ +
Sbjct: 107 HLM--GADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAV 158
Query: 502 DKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQT-DVFGFGILIL 560
           +++   ++ DFGLAR H   ++   T  V T  Y APE+  +     QT D++  G ++ 
Sbjct: 159 NEDCELKILDFGLAR-HTDDEM---TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMA 214
Query: 561 EVLSGR 566
           E+L+GR
Sbjct: 215 ELLTGR 220

>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By The Scaffolding Protein Jip1 And Sp600125 Length = 369

Iteration: 1
 Score = 55.1 bits (131), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 50/180 (27%), Positives = 84/180 (46%), Gaps = 16/180 (8%)
Query: 392 IAVKRISHENDGGTRAFLA--EISSLGRLKHKSLVGLRGWCKREKG--SLMLVYDYME-- 445
           +A+K++S      T A  A  E+  +  + HK+++GL      +K       VY  ME  
Sbjct: 52  VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM 111
Query: 446 NGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEM 505
           + +L + I      M L  E    +L  +  G+ +LH      ++HRD+K SN+++  + 
Sbjct: 112 DANLCQVI-----QMELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDC 163
Query: 506 NGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSG 565
             ++ DFGLAR  G   +   T  V T  Y APEV          D++  G ++ E++ G
Sbjct: 164 TLKILDFGLARTAGTSFM--MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221

>pdb|2OZA|B Chain B, Structure Of P38alpha Complex Length = 366

Iteration: 1
 Score = 55.1 bits (131), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 51/186 (27%), Positives = 90/186 (48%), Gaps = 20/186 (10%)
Query: 389 GAEIAVKRISHENDGGTRA--FLAEISSLGRLKHKSLVGL-----RGWCKREKGSLMLVY 441
           G  +AVK++S        A     E+  L  +KH++++GL           E   + LV 
Sbjct: 53  GHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 112
Query: 442 DYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLL 501
             M  G+    I +C     L+ +    ++  +  G+ Y+H      ++HRD+K SN+ +
Sbjct: 113 HLM--GADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAV 164
Query: 502 DKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQT-DVFGFGILIL 560
           +++   ++ DFGLAR H   ++   T  V T  Y APE+  +     QT D++  G ++ 
Sbjct: 165 NEDCELKILDFGLAR-HTDDEM---TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMA 220
Query: 561 EVLSGR 566
           E+L+GR
Sbjct: 221 ELLTGR 226

>pdb|3HEC|A Chain A, P38 In Complex With Imatinib Length = 348

Iteration: 1
 Score = 55.1 bits (131), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 51/186 (27%), Positives = 90/186 (48%), Gaps = 20/186 (10%)
Query: 389 GAEIAVKRISHENDGGTRA--FLAEISSLGRLKHKSLVGL-----RGWCKREKGSLMLVY 441
           G  +AVK++S        A     E+  L  +KH++++GL           E   + LV 
Sbjct: 43  GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 102
Query: 442 DYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLL 501
             M  G+    I +C     L+ +    ++  +  G+ Y+H      ++HRD+K SN+ +
Sbjct: 103 HLM--GADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAV 154
Query: 502 DKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQT-DVFGFGILIL 560
           +++   ++ DFGLAR H   ++   T  V T  Y APE+  +     QT D++  G ++ 
Sbjct: 155 NEDCELKILDFGLAR-HTDDEM---TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMA 210
Query: 561 EVLSGR 566
           E+L+GR
Sbjct: 211 ELLTGR 216

>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The Docking Site On Its Nuclear Substrate Mef2a Length = 360

Iteration: 1
 Score = 55.1 bits (131), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 51/186 (27%), Positives = 90/186 (48%), Gaps = 20/186 (10%)
Query: 389 GAEIAVKRISHENDGGTRA--FLAEISSLGRLKHKSLVGL-----RGWCKREKGSLMLVY 441
           G  +AVK++S        A     E+  L  +KH++++GL           E   + LV 
Sbjct: 47  GHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 106
Query: 442 DYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLL 501
             M  G+    I +C     L+ +    ++  +  G+ Y+H      ++HRD+K SN+ +
Sbjct: 107 HLM--GADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAV 158
Query: 502 DKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQT-DVFGFGILIL 560
           +++   ++ DFGLAR H   ++   T  V T  Y APE+  +     QT D++  G ++ 
Sbjct: 159 NEDCELKILDFGLAR-HTDDEM---TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMA 214
Query: 561 EVLSGR 566
           E+L+GR
Sbjct: 215 ELLTGR 220

>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And Nck-Interacting Kinase With Wee1chk1 Inhibitor Length = 326

Iteration: 1
 Score = 55.1 bits (131), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 43/145 (29%), Positives = 70/145 (48%), Gaps = 12/145 (8%)
Query: 436 SLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIR-VLKDVAAGVLYLHEGWEKKVLHRDI 494
            L LV ++   GS+   I    G+ +   EE I  + +++  G+ +LH+    KV+HRDI
Sbjct: 101 QLWLVMEFCGAGSVTDLIKNTKGNTLK--EEWIAYICREILRGLSHLHQ---HKVIHRDI 155
Query: 495 KSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQT---- 550
           K  NVLL +    +L DFG++       V      +GT  ++APEV +       T    
Sbjct: 156 KGQNVLLTENAEVKLVDFGVSAQLDR-TVGRRNTFIGTPYWMAPEVIACDENPDATYDFK 214
Query: 551 -DVFGFGILILEVLSGRRPIEEGKP 574
            D++  GI  +E+  G  P+ +  P
Sbjct: 215 SDLWSLGITAIEMAEGAPPLCDMHP 239

>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase Length = 367

Iteration: 1
 Score = 55.1 bits (131), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 51/186 (27%), Positives = 90/186 (48%), Gaps = 20/186 (10%)
Query: 389 GAEIAVKRISHENDGGTRA--FLAEISSLGRLKHKSLVGL-----RGWCKREKGSLMLVY 441
           G  +AVK++S        A     E+  L  +KH++++GL           E   + LV 
Sbjct: 54  GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 113
Query: 442 DYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLL 501
             M  G+    I +C     L+ +    ++  +  G+ Y+H      ++HRD+K SN+ +
Sbjct: 114 HLM--GADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAV 165
Query: 502 DKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQT-DVFGFGILIL 560
           +++   ++ DFGLAR H   ++   T  V T  Y APE+  +     QT D++  G ++ 
Sbjct: 166 NEDCELKILDFGLAR-HTDDEM---TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMA 221
Query: 561 EVLSGR 566
           E+L+GR
Sbjct: 222 ELLTGR 227

>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small Molecule Inhibitor Length = 349

Iteration: 1
 Score = 55.1 bits (131), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 51/186 (27%), Positives = 90/186 (48%), Gaps = 20/186 (10%)
Query: 389 GAEIAVKRISHENDGGTRA--FLAEISSLGRLKHKSLVGL-----RGWCKREKGSLMLVY 441
           G  +AVK++S        A     E+  L  +KH++++GL           E   + LV 
Sbjct: 44  GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 103
Query: 442 DYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLL 501
             M  G+    I +C     L+ +    ++  +  G+ Y+H      ++HRD+K SN+ +
Sbjct: 104 HLM--GADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAV 155
Query: 502 DKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQT-DVFGFGILIL 560
           +++   ++ DFGLAR H   ++   T  V T  Y APE+  +     QT D++  G ++ 
Sbjct: 156 NEDCELKILDFGLAR-HTDDEM---TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMA 211
Query: 561 EVLSGR 566
           E+L+GR
Sbjct: 212 ELLTGR 217

>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant Length = 360

Iteration: 1
 Score = 55.1 bits (131), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 51/186 (27%), Positives = 90/186 (48%), Gaps = 20/186 (10%)
Query: 389 GAEIAVKRISHENDGGTRA--FLAEISSLGRLKHKSLVGL-----RGWCKREKGSLMLVY 441
           G  +AVK++S        A     E+  L  +KH++++GL           E   + LV 
Sbjct: 47  GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 106
Query: 442 DYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLL 501
             M  G+    I +C     L+ +    ++  +  G+ Y+H      ++HRD+K SN+ +
Sbjct: 107 HLM--GADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAV 158
Query: 502 DKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQT-DVFGFGILIL 560
           +++   ++ DFGLAR H   ++   T  V T  Y APE+  +     QT D++  G ++ 
Sbjct: 159 NEDCELKILDFGLAR-HTDDEM---TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMA 214
Query: 561 EVLSGR 566
           E+L+GR
Sbjct: 215 ELLTGR 220

>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant Length = 360

Iteration: 1
 Score = 55.1 bits (131), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 51/186 (27%), Positives = 90/186 (48%), Gaps = 20/186 (10%)
Query: 389 GAEIAVKRISHENDGGTRA--FLAEISSLGRLKHKSLVGL-----RGWCKREKGSLMLVY 441
           G  +AVK++S        A     E+  L  +KH++++GL           E   + LV 
Sbjct: 47  GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 106
Query: 442 DYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLL 501
             M  G+    I +C     L+ +    ++  +  G+ Y+H      ++HRD+K SN+ +
Sbjct: 107 HLM--GADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAV 158
Query: 502 DKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQT-DVFGFGILIL 560
           +++   ++ DFGLAR H   ++   T  V T  Y APE+  +     QT D++  G ++ 
Sbjct: 159 NEDCELKILDFGLAR-HTDDEM---TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMA 214
Query: 561 EVLSGR 566
           E+L+GR
Sbjct: 215 ELLTGR 220

>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48 Length = 360

Iteration: 1
 Score = 55.1 bits (131), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 51/186 (27%), Positives = 90/186 (48%), Gaps = 20/186 (10%)
Query: 389 GAEIAVKRISHENDGGTRA--FLAEISSLGRLKHKSLVGL-----RGWCKREKGSLMLVY 441
           G  +AVK++S        A     E+  L  +KH++++GL           E   + LV 
Sbjct: 47  GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 106
Query: 442 DYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLL 501
             M  G+    I +C     L+ +    ++  +  G+ Y+H      ++HRD+K SN+ +
Sbjct: 107 HLM--GADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAV 158
Query: 502 DKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQT-DVFGFGILIL 560
           +++   ++ DFGLAR H   ++   T  V T  Y APE+  +     QT D++  G ++ 
Sbjct: 159 NEDCELKILDFGLAR-HTDDEM---TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMA 214
Query: 561 EVLSGR 566
           E+L+GR
Sbjct: 215 ELLTGR 220

>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain Length = 346

Iteration: 1
 Score = 55.1 bits (131), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 72/251 (28%), Positives = 108/251 (43%), Gaps = 29/251 (11%)
Query: 391 EIAVKRISHENDGGTRAFLAEISSLGRL-KHKSLVGLRGWCKREKGSLMLVYDYMENGSL 449
           E AVK I    D   R    EI  L R  +H +++ L+      K  + LV + M  G L
Sbjct: 54  EYAVKVI----DKSKRDPSEEIEILLRYGQHPNIITLKDVYDDGK-HVYLVTELMRGGEL 108
Query: 450 -DKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVL-LDKEMNG 507
            DK + Q       S  E   VL  +   V YLH    + V+HRD+K SN+L +D+  N 
Sbjct: 109 LDKILRQ----KFFSEREASFVLHTIGKTVEYLHS---QGVVHRDLKPSNILYVDESGNP 161
Query: 508 ---RLGDFGLAR-MHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVL 563
              R+ DFG A+ +     +  T     T  ++APEV          D++  GIL+  +L
Sbjct: 162 ECLRICDFGFAKQLRAENGLLMTP--CYTANFVAPEVLKRQGYDEGCDIWSLGILLYTML 219
Query: 564 SGRRPIEEGKPNLVEMVWELMVQGKXXXXXXXXXXXKGGFDEDEVERVLHLGLLCAYPDP 623
           +G  P   G  +  E +   +  GK                +D V ++LH+       DP
Sbjct: 220 AGYTPFANGPSDTPEEILTRIGSGKFTLSGGNWNTV-SETAKDLVSKMLHV-------DP 271
Query: 624 RARPTMRQVVK 634
             R T +QV++
Sbjct: 272 HQRLTAKQVLQ 282

>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955 Length = 350

Iteration: 1
 Score = 55.1 bits (131), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 51/186 (27%), Positives = 90/186 (48%), Gaps = 20/186 (10%)
Query: 389 GAEIAVKRISHENDGGTRA--FLAEISSLGRLKHKSLVGL-----RGWCKREKGSLMLVY 441
           G  +AVK++S        A     E+  L  +KH++++GL           E   + LV 
Sbjct: 45  GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 104
Query: 442 DYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLL 501
             M  G+    I +C     L+ +    ++  +  G+ Y+H      ++HRD+K SN+ +
Sbjct: 105 HLM--GADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAV 156
Query: 502 DKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQT-DVFGFGILIL 560
           +++   ++ DFGLAR H   ++   T  V T  Y APE+  +     QT D++  G ++ 
Sbjct: 157 NEDCELKILDFGLAR-HTDDEM---TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMA 212
Query: 561 EVLSGR 566
           E+L+GR
Sbjct: 213 ELLTGR 218

>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The Kinase Domain Of Focal Adhesion Kinase With A Phosphorylated Activation Loop Length = 276

Iteration: 1
 Score = 55.1 bits (131), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 48/194 (24%), Positives = 88/194 (45%), Gaps = 9/194 (4%)
Query: 386 EGGGAEIAVKRISHENDGGTR-AFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYM 444
           E     +A+K   +      R  FL E  ++ +  H  +V L G     +  + ++ +  
Sbjct: 35  ENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT--ENPVWIIMELC 92
Query: 445 ENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKE 504
             G L  ++     S+ L+    I     ++  + YL     K+ +HRDI + NVL+   
Sbjct: 93  TLGELRSFLQVRKFSLDLA--SLILYAYQLSTALAYLES---KRFVHRDIAARNVLVSSN 147
Query: 505 MNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVL- 563
              +LGDFGL+R          ++    + ++APE  +  R ++ +DV+ FG+ + E+L 
Sbjct: 148 DCVKLGDFGLSRYMEDSTXXKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILM 207
Query: 564 SGRRPIEEGKPNLV 577
            G +P +  K N V
Sbjct: 208 HGVKPFQGVKNNDV 221

>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 55.1 bits (131), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 50/180 (27%), Positives = 84/180 (46%), Gaps = 16/180 (8%)
Query: 392 IAVKRISHENDGGTRAFLA--EISSLGRLKHKSLVGLRGWCKREKG--SLMLVYDYME-- 445
           +A+K++S      T A  A  E+  +  + HK+++GL      +K       VY  ME  
Sbjct: 52  VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM 111
Query: 446 NGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEM 505
           + +L + I      M L  E    +L  +  G+ +LH      ++HRD+K SN+++  + 
Sbjct: 112 DANLCQVI-----QMELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDC 163
Query: 506 NGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSG 565
             ++ DFGLAR  G   +   T  V T  Y APEV          D++  G ++ E++ G
Sbjct: 164 TLKILDFGLARTAGTSFM--MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221

>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A Dihydroquinazolinone Inhibitor Length = 366

Iteration: 1
 Score = 55.1 bits (131), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 51/186 (27%), Positives = 90/186 (48%), Gaps = 20/186 (10%)
Query: 389 GAEIAVKRISHENDGGTRA--FLAEISSLGRLKHKSLVGL-----RGWCKREKGSLMLVY 441
           G  +AVK++S        A     E+  L  +KH++++GL           E   + LV 
Sbjct: 53  GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 112
Query: 442 DYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLL 501
             M  G+    I +C     L+ +    ++  +  G+ Y+H      ++HRD+K SN+ +
Sbjct: 113 HLM--GADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAV 164
Query: 502 DKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQT-DVFGFGILIL 560
           +++   ++ DFGLAR H   ++   T  V T  Y APE+  +     QT D++  G ++ 
Sbjct: 165 NEDCELKILDFGLAR-HTDDEM---TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMA 220
Query: 561 EVLSGR 566
           E+L+GR
Sbjct: 221 ELLTGR 226

>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121 Length = 362

Iteration: 1
 Score = 55.1 bits (131), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 51/186 (27%), Positives = 90/186 (48%), Gaps = 20/186 (10%)
Query: 389 GAEIAVKRISHENDGGTRA--FLAEISSLGRLKHKSLVGL-----RGWCKREKGSLMLVY 441
           G  +AVK++S        A     E+  L  +KH++++GL           E   + LV 
Sbjct: 49  GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 108
Query: 442 DYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLL 501
             M  G+    I +C     L+ +    ++  +  G+ Y+H      ++HRD+K SN+ +
Sbjct: 109 HLM--GADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAV 160
Query: 502 DKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQT-DVFGFGILIL 560
           +++   ++ DFGLAR H   ++   T  V T  Y APE+  +     QT D++  G ++ 
Sbjct: 161 NEDCELKILDFGLAR-HTDDEM---TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMA 216
Query: 561 EVLSGR 566
           E+L+GR
Sbjct: 217 ELLTGR 222

>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl Amide Inhibitor Length = 371

Iteration: 1
 Score = 55.1 bits (131), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 51/186 (27%), Positives = 90/186 (48%), Gaps = 20/186 (10%)
Query: 389 GAEIAVKRISHENDGGTRA--FLAEISSLGRLKHKSLVGL-----RGWCKREKGSLMLVY 441
           G  +AVK++S        A     E+  L  +KH++++GL           E   + LV 
Sbjct: 58  GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 117
Query: 442 DYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLL 501
             M  G+    I +C     L+ +    ++  +  G+ Y+H      ++HRD+K SN+ +
Sbjct: 118 HLM--GADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAV 169
Query: 502 DKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQT-DVFGFGILIL 560
           +++   ++ DFGLAR H   ++   T  V T  Y APE+  +     QT D++  G ++ 
Sbjct: 170 NEDXELKILDFGLAR-HTDDEM---TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMA 225
Query: 561 EVLSGR 566
           E+L+GR
Sbjct: 226 ELLTGR 231

>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin Antagonistically Control The Nuclear Shuttling Of Nfat4 Length = 371

Iteration: 1
 Score = 55.1 bits (131), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 50/180 (27%), Positives = 84/180 (46%), Gaps = 16/180 (8%)
Query: 392 IAVKRISHENDGGTRAFLA--EISSLGRLKHKSLVGLRGWCKREKG--SLMLVYDYME-- 445
           +A+K++S      T A  A  E+  +  + HK+++GL      +K       VY  ME  
Sbjct: 53  VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM 112
Query: 446 NGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEM 505
           + +L + I      M L  E    +L  +  G+ +LH      ++HRD+K SN+++  + 
Sbjct: 113 DANLCQVI-----QMELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDC 164
Query: 506 NGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSG 565
             ++ DFGLAR  G   +   T  V T  Y APEV          D++  G ++ E++ G
Sbjct: 165 TLKILDFGLARTAGTSFM--MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 222

>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant Length = 360

Iteration: 1
 Score = 55.1 bits (131), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 51/186 (27%), Positives = 90/186 (48%), Gaps = 20/186 (10%)
Query: 389 GAEIAVKRISHENDGGTRA--FLAEISSLGRLKHKSLVGL-----RGWCKREKGSLMLVY 441
           G  +AVK++S        A     E+  L  +KH++++GL           E   + LV 
Sbjct: 47  GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 106
Query: 442 DYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLL 501
             M  G+    I +C     L+ +    ++  +  G+ Y+H      ++HRD+K SN+ +
Sbjct: 107 HLM--GADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAV 158
Query: 502 DKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQT-DVFGFGILIL 560
           +++   ++ DFGLAR H   ++   T  V T  Y APE+  +     QT D++  G ++ 
Sbjct: 159 NEDCELKILDFGLAR-HTDDEM---TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMA 214
Query: 561 EVLSGR 566
           E+L+GR
Sbjct: 215 ELLTGR 220

>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In Phosphorylated P38a And In Solution Length = 370

Iteration: 1
 Score = 55.1 bits (131), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 51/186 (27%), Positives = 90/186 (48%), Gaps = 20/186 (10%)
Query: 389 GAEIAVKRISHENDGGTRA--FLAEISSLGRLKHKSLVGL-----RGWCKREKGSLMLVY 441
           G  +AVK++S        A     E+  L  +KH++++GL           E   + LV 
Sbjct: 57  GHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 116
Query: 442 DYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLL 501
             M  G+    I +C     L+ +    ++  +  G+ Y+H      ++HRD+K SN+ +
Sbjct: 117 HLM--GADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAV 168
Query: 502 DKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQT-DVFGFGILIL 560
           +++   ++ DFGLAR H   ++   T  V T  Y APE+  +     QT D++  G ++ 
Sbjct: 169 NEDCELKILDFGLAR-HTDDEM---TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMA 224
Query: 561 EVLSGR 566
           E+L+GR
Sbjct: 225 ELLTGR 230

>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With Inhibitor Pg-892579 Length = 348

Iteration: 1
 Score = 55.1 bits (131), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 51/186 (27%), Positives = 90/186 (48%), Gaps = 20/186 (10%)
Query: 389 GAEIAVKRISHENDGGTRA--FLAEISSLGRLKHKSLVGL-----RGWCKREKGSLMLVY 441
           G  +AVK++S        A     E+  L  +KH++++GL           E   + LV 
Sbjct: 43  GHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 102
Query: 442 DYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLL 501
             M  G+    I +C     L+ +    ++  +  G+ Y+H      ++HRD+K SN+ +
Sbjct: 103 HLM--GADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAV 154
Query: 502 DKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQT-DVFGFGILIL 560
           +++   ++ DFGLAR H   ++   T  V T  Y APE+  +     QT D++  G ++ 
Sbjct: 155 NEDCELKILDFGLAR-HTDDEM---TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMA 210
Query: 561 EVLSGR 566
           E+L+GR
Sbjct: 211 ELLTGR 216

>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp Length = 295

Iteration: 1
 Score = 55.1 bits (131), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 48/189 (25%), Positives = 88/189 (46%), Gaps = 14/189 (7%)
Query: 385 LEGGGAEIAVKRISHENDGGTRAFLA-EISSLGRLKHKSLVGLRGWCKREKGSLMLVYDY 443
           L+     I  +R      G +R  +  E+S L  ++H +++ L       K  ++L+ + 
Sbjct: 37  LQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHE-VYENKTDVILILEL 95
Query: 444 MENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNV-LLD 502
           +  G L  ++ + +    L+ EE    LK +  GV YLH     ++ H D+K  N+ LLD
Sbjct: 96  VAGGELFDFLAEKES---LTEEEATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLD 149
Query: 503 KEMNG---RLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILI 559
           + +     ++ DFGLA     G       + GT  ++APE+ +      + D++  G++ 
Sbjct: 150 RNVPKPRIKIIDFGLAHKIDFGN--EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVIT 207
Query: 560 LEVLSGRRP 568
             +LSG  P
Sbjct: 208 YILLSGASP 216

>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A Natural Jnk1 Inhibitor Length = 379

Iteration: 1
 Score = 54.7 bits (130), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 50/180 (27%), Positives = 84/180 (46%), Gaps = 16/180 (8%)
Query: 392 IAVKRISHENDGGTRAFLA--EISSLGRLKHKSLVGLRGWCKREKG--SLMLVYDYME-- 445
           +A+K++S      T A  A  E+  +  + HK+++GL      +K       VY  ME  
Sbjct: 52  VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM 111
Query: 446 NGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEM 505
           + +L + I      M L  E    +L  +  G+ +LH      ++HRD+K SN+++  + 
Sbjct: 112 DANLCQVI-----QMELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDC 163
Query: 506 NGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSG 565
             ++ DFGLAR  G   +   T  V T  Y APEV          D++  G ++ E++ G
Sbjct: 164 TLKILDFGLARTAGTSFM--MTPEVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221

>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a) Activating Mutant Length = 367

Iteration: 1
 Score = 54.7 bits (130), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 51/186 (27%), Positives = 90/186 (48%), Gaps = 20/186 (10%)
Query: 389 GAEIAVKRISHENDGGTRA--FLAEISSLGRLKHKSLVGL-----RGWCKREKGSLMLVY 441
           G  +AVK++S        A     E+  L  +KH++++GL           E   + LV 
Sbjct: 54  GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 113
Query: 442 DYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLL 501
             M  G+    I +C     L+ +    ++  +  G+ Y+H      ++HRD+K SN+ +
Sbjct: 114 HLM--GADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAV 165
Query: 502 DKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQT-DVFGFGILIL 560
           +++   ++ DFGLAR H   ++   T  V T  Y APE+  +     QT D++  G ++ 
Sbjct: 166 NEDCELKILDFGLAR-HTADEM---TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMA 221
Query: 561 EVLSGR 566
           E+L+GR
Sbjct: 222 ELLTGR 227

>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole Inhibitor Length = 372

Iteration: 1
 Score = 54.7 bits (130), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 51/186 (27%), Positives = 90/186 (48%), Gaps = 20/186 (10%)
Query: 389 GAEIAVKRISHENDGGTRA--FLAEISSLGRLKHKSLVGL-----RGWCKREKGSLMLVY 441
           G  +AVK++S        A     E+  L  +KH++++GL           E   + LV 
Sbjct: 59  GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 118
Query: 442 DYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLL 501
             M  G+    I +C     L+ +    ++  +  G+ Y+H      ++HRD+K SN+ +
Sbjct: 119 HLM--GADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAV 170
Query: 502 DKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQT-DVFGFGILIL 560
           +++   ++ DFGLAR H   ++   T  V T  Y APE+  +     QT D++  G ++ 
Sbjct: 171 NEDCELKILDFGLAR-HTDDEM---TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMA 226
Query: 561 EVLSGR 566
           E+L+GR
Sbjct: 227 ELLTGR 232

>pdb|3SOA|A Chain A, Full-Length Human Camkii Length = 444

Iteration: 1
 Score = 54.7 bits (130), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 44/154 (28%), Positives = 74/154 (48%), Gaps = 11/154 (7%)
Query: 418 LKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAG 477
           LKH ++V L      E+G   L++D +  G L + I         S  +    ++ +   
Sbjct: 67  LKHPNIVRLHD-SISEEGHHYLIFDLVTGGELFEDIV---AREYYSEADASHCIQQILEA 122
Query: 478 VLYLHEGWEKKVLHRDIKSSNVLLDKEMNG---RLGDFGLARMHGHGQVASTTRVVGTVG 534
           VL+ H+     V+HR++K  N+LL  ++ G   +L DFGLA +   G+  +     GT G
Sbjct: 123 VLHCHQ---MGVVHRNLKPENLLLASKLKGAAVKLADFGLA-IEVEGEQQAWFGFAGTPG 178
Query: 535 YLAPEVFSSGRASTQTDVFGFGILILEVLSGRRP 568
           YL+PEV          D++  G+++  +L G  P
Sbjct: 179 YLSPEVLRKDPYGKPVDLWACGVILYILLVGYPP 212

>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195 Length = 372

Iteration: 1
 Score = 54.7 bits (130), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 51/186 (27%), Positives = 90/186 (48%), Gaps = 20/186 (10%)
Query: 389 GAEIAVKRISHENDGGTRA--FLAEISSLGRLKHKSLVGL-----RGWCKREKGSLMLVY 441
           G  +AVK++S        A     E+  L  +KH++++GL           E   + LV 
Sbjct: 59  GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 118
Query: 442 DYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLL 501
             M  G+    I +C     L+ +    ++  +  G+ Y+H      ++HRD+K SN+ +
Sbjct: 119 HLM--GADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAV 170
Query: 502 DKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQT-DVFGFGILIL 560
           +++   ++ DFGLAR H   ++   T  V T  Y APE+  +     QT D++  G ++ 
Sbjct: 171 NEDCELKILDFGLAR-HTDDEM---TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMA 226
Query: 561 EVLSGR 566
           E+L+GR
Sbjct: 227 ELLTGR 232

>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With Bound Inhibitor Fragment Length = 293

Iteration: 1
 Score = 54.7 bits (130), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 48/189 (25%), Positives = 88/189 (46%), Gaps = 14/189 (7%)
Query: 385 LEGGGAEIAVKRISHENDGGTRAFLA-EISSLGRLKHKSLVGLRGWCKREKGSLMLVYDY 443
           L+     I  +R      G +R  +  E+S L  ++H +++ L       K  ++L+ + 
Sbjct: 36  LQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHE-VYENKTDVILILEL 94
Query: 444 MENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNV-LLD 502
           +  G L  ++ + +    L+ EE    LK +  GV YLH     ++ H D+K  N+ LLD
Sbjct: 95  VAGGELFDFLAEKES---LTEEEATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLD 148
Query: 503 KEMNG---RLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILI 559
           + +     ++ DFGLA     G       + GT  ++APE+ +      + D++  G++ 
Sbjct: 149 RNVPKPRIKIIDFGLAHKIDFGN--EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVIT 206
Query: 560 LEVLSGRRP 568
             +LSG  P
Sbjct: 207 YILLSGASP 215

>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase Domain Of The Human Epidermal Growth Factor Receptor 3 (Her3) Length = 325

Iteration: 1
 Score = 54.7 bits (130), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 49/183 (26%), Positives = 88/183 (48%), Gaps = 11/183 (6%)
Query: 386 EGGGAEIAVKRISHENDGGTRAFLA---EISSLGRLKHKSLVGLRGWCKREKGSLMLVYD 442
           EG   +I V     E+  G ++F A    + ++G L H  +V L G C     SL LV  
Sbjct: 37  EGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCP--GSSLQLVTQ 94
Query: 443 YMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLD 502
           Y+  GSL   + Q  G+  L  +  +     +A G+ YL E     ++HR++ + NVLL 
Sbjct: 95  YLPLGSLLDHVRQHRGA--LGPQLLLNWGVQIAKGMYYLEE---HGMVHRNLAARNVLLK 149
Query: 503 KEMNGRLGDFGLAR-MHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILE 561
                ++ DFG+A  +    +    +     + ++A E    G+ + Q+DV+ +G+ + E
Sbjct: 150 SPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWE 209
Query: 562 VLS 564
           +++
Sbjct: 210 LMT 212

>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein Kinase 11 (p38 Beta) In Complex With Nilotinib Length = 348

Iteration: 1
 Score = 54.7 bits (130), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 51/183 (27%), Positives = 88/183 (48%), Gaps = 18/183 (9%)
Query: 391 EIAVKRISH--ENDGGTRAFLAEISSLGRLKHKSLVGL----RGWCKREKGSLMLVYDYM 444
           ++AVK++S   ++    R    E+  L  LKH++++GL          E  S + +   +
Sbjct: 47  KVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTL 106
Query: 445 ENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKE 504
               L+  I +C     LS E    ++  +  G+ Y+H      ++HRD+K SNV ++++
Sbjct: 107 MGADLNN-IVKCQA---LSDEHVQFLVYQLLRGLKYIHSA---GIIHRDLKPSNVAVNED 159
Query: 505 MNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQT-DVFGFGILILEVL 563
              R+ DFGLAR          T  V T  Y APE+  +     QT D++  G ++ E+L
Sbjct: 160 CELRILDFGLARQADE----EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 215
Query: 564 SGR 566
            G+
Sbjct: 216 QGK 218

>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain Length = 311

Iteration: 1
 Score = 54.7 bits (130), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 55/197 (27%), Positives = 92/197 (46%), Gaps = 18/197 (9%)
Query: 389 GAEIAVKR-ISHENDGGTRAF-LAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMEN 446
           G  +A+K+ +  E+D   +   L EI  L +LKH +LV L    +R K  L LV++Y ++
Sbjct: 28  GQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRR-KRRLHLVFEYCDH 86
Query: 447 G---SLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDK 503
                LD++       ++ S      +       V + H+      +HRD+K  N+L+ K
Sbjct: 87  TVLHELDRYQRGVPEHLVKS------ITWQTLQAVNFCHK---HNCIHRDVKPENILITK 137
Query: 504 EMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVF-SSGRASTQTDVFGFGILILEV 562
               +L DFG AR+   G        V T  Y +PE+     +     DV+  G +  E+
Sbjct: 138 HSVIKLCDFGFARLLT-GPSDYYDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAEL 196
Query: 563 LSGRRPIEEGKPNLVEM 579
           LSG  P+  GK ++ ++
Sbjct: 197 LSG-VPLWPGKSDVDQL 212

>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s) Activating Mutant Form-A Length = 367

Iteration: 1
 Score = 54.7 bits (130), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 51/186 (27%), Positives = 90/186 (48%), Gaps = 20/186 (10%)
Query: 389 GAEIAVKRISHENDGGTRA--FLAEISSLGRLKHKSLVGL-----RGWCKREKGSLMLVY 441
           G  +AVK++S        A     E+  L  +KH++++GL           E   + LV 
Sbjct: 54  GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 113
Query: 442 DYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLL 501
             M  G+    I +C     L+ +    ++  +  G+ Y+H      ++HRD+K SN+ +
Sbjct: 114 HLM--GADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAV 165
Query: 502 DKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQT-DVFGFGILIL 560
           +++   ++ DFGLAR H   ++   T  V T  Y APE+  +     QT D++  G ++ 
Sbjct: 166 NEDCELKILDFGLAR-HTADEM---TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMA 221
Query: 561 EVLSGR 566
           E+L+GR
Sbjct: 222 ELLTGR 227

>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1- Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3- Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide Length = 380

Iteration: 1
 Score = 54.7 bits (130), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 51/186 (27%), Positives = 90/186 (48%), Gaps = 20/186 (10%)
Query: 389 GAEIAVKRISHENDGGTRA--FLAEISSLGRLKHKSLVGL-----RGWCKREKGSLMLVY 441
           G  +AVK++S        A     E+  L  +KH++++GL           E   + LV 
Sbjct: 67  GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 126
Query: 442 DYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLL 501
             M  G+    I +C     L+ +    ++  +  G+ Y+H      ++HRD+K SN+ +
Sbjct: 127 HLM--GADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAV 178
Query: 502 DKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQT-DVFGFGILIL 560
           +++   ++ DFGLAR H   ++   T  V T  Y APE+  +     QT D++  G ++ 
Sbjct: 179 NEDCELKILDFGLAR-HTDDEM---TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMA 234
Query: 561 EVLSGR 566
           E+L+GR
Sbjct: 235 ELLTGR 240

>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A Dihydroquinolinone Length = 366

Iteration: 1
 Score = 54.7 bits (130), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 51/186 (27%), Positives = 90/186 (48%), Gaps = 20/186 (10%)
Query: 389 GAEIAVKRISHENDGGTRA--FLAEISSLGRLKHKSLVGL-----RGWCKREKGSLMLVY 441
           G  +AVK++S        A     E+  L  +KH++++GL           E   + LV 
Sbjct: 53  GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 112
Query: 442 DYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLL 501
             M  G+    I +C     L+ +    ++  +  G+ Y+H      ++HRD+K SN+ +
Sbjct: 113 HLM--GADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAV 164
Query: 502 DKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQT-DVFGFGILIL 560
           +++   ++ DFGLAR H   ++   T  V T  Y APE+  +     QT D++  G ++ 
Sbjct: 165 NEDSELKILDFGLAR-HTDDEM---TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMA 220
Query: 561 EVLSGR 566
           E+L+GR
Sbjct: 221 ELLTGR 226

>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Pyrrole-2- Carboxamide Inhibitor Length = 371

Iteration: 1
 Score = 54.7 bits (130), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 51/186 (27%), Positives = 90/186 (48%), Gaps = 20/186 (10%)
Query: 389 GAEIAVKRISHENDGGTRA--FLAEISSLGRLKHKSLVGL-----RGWCKREKGSLMLVY 441
           G  +AVK++S        A     E+  L  +KH++++GL           E   + LV 
Sbjct: 58  GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 117
Query: 442 DYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLL 501
             M  G+    I +C     L+ +    ++  +  G+ Y+H      ++HRD+K SN+ +
Sbjct: 118 HLM--GADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAV 169
Query: 502 DKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQT-DVFGFGILIL 560
           +++   ++ DFGLAR H   ++   T  V T  Y APE+  +     QT D++  G ++ 
Sbjct: 170 NEDCELKILDFGLAR-HTDDEM---TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMA 225
Query: 561 EVLSGR 566
           E+L+GR
Sbjct: 226 ELLTGR 231

>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995 Length = 379

Iteration: 1
 Score = 54.7 bits (130), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 51/186 (27%), Positives = 90/186 (48%), Gaps = 20/186 (10%)
Query: 389 GAEIAVKRISHENDGGTRA--FLAEISSLGRLKHKSLVGL-----RGWCKREKGSLMLVY 441
           G  +AVK++S        A     E+  L  +KH++++GL           E   + LV 
Sbjct: 66  GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 125
Query: 442 DYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLL 501
             M  G+    I +C     L+ +    ++  +  G+ Y+H      ++HRD+K SN+ +
Sbjct: 126 HLM--GADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAV 177
Query: 502 DKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQT-DVFGFGILIL 560
           +++   ++ DFGLAR H   ++   T  V T  Y APE+  +     QT D++  G ++ 
Sbjct: 178 NEDCELKILDFGLAR-HTDDEM---TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMA 233
Query: 561 EVLSGR 566
           E+L+GR
Sbjct: 234 ELLTGR 239

>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase In Complex With Amppnp And Mg2+ Length = 295

Iteration: 1
 Score = 54.7 bits (130), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 48/189 (25%), Positives = 88/189 (46%), Gaps = 14/189 (7%)
Query: 385 LEGGGAEIAVKRISHENDGGTRAFLA-EISSLGRLKHKSLVGLRGWCKREKGSLMLVYDY 443
           L+     I  +R      G +R  +  E+S L  ++H +++ L       K  ++L+ + 
Sbjct: 37  LQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHE-VYENKTDVILILEL 95
Query: 444 MENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNV-LLD 502
           +  G L  ++ + +    L+ EE    LK +  GV YLH     ++ H D+K  N+ LLD
Sbjct: 96  VAGGELFDFLAEKES---LTEEEATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLD 149
Query: 503 KEMNG---RLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILI 559
           + +     ++ DFGLA     G       + GT  ++APE+ +      + D++  G++ 
Sbjct: 150 RNVPKPRIKIIDFGLAHKIDFGN--EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVIT 207
Query: 560 LEVLSGRRP 568
             +LSG  P
Sbjct: 208 YILLSGASP 216

>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic Domain Of Death-Associated Protein Kinase With Atp Analogue And Mn. Length = 294

Iteration: 1
 Score = 54.7 bits (130), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 48/189 (25%), Positives = 88/189 (46%), Gaps = 14/189 (7%)
Query: 385 LEGGGAEIAVKRISHENDGGTRAFLA-EISSLGRLKHKSLVGLRGWCKREKGSLMLVYDY 443
           L+     I  +R      G +R  +  E+S L  ++H +++ L       K  ++L+ + 
Sbjct: 36  LQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHE-VYENKTDVILILEL 94
Query: 444 MENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNV-LLD 502
           +  G L  ++ + +    L+ EE    LK +  GV YLH     ++ H D+K  N+ LLD
Sbjct: 95  VAGGELFDFLAEKES---LTEEEATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLD 148
Query: 503 KEMNG---RLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILI 559
           + +     ++ DFGLA     G       + GT  ++APE+ +      + D++  G++ 
Sbjct: 149 RNVPKPRIKIIDFGLAHKIDFGN--EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVIT 206
Query: 560 LEVLSGRRP 568
             +LSG  P
Sbjct: 207 YILLSGASP 215

>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk Docking Partner Length = 380

Iteration: 1
 Score = 54.7 bits (130), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 51/186 (27%), Positives = 90/186 (48%), Gaps = 20/186 (10%)
Query: 389 GAEIAVKRISHENDGGTRA--FLAEISSLGRLKHKSLVGL-----RGWCKREKGSLMLVY 441
           G  +AVK++S        A     E+  L  +KH++++GL           E   + LV 
Sbjct: 67  GHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 126
Query: 442 DYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLL 501
             M  G+    I +C     L+ +    ++  +  G+ Y+H      ++HRD+K SN+ +
Sbjct: 127 HLM--GADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAV 178
Query: 502 DKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQT-DVFGFGILIL 560
           +++   ++ DFGLAR H   ++   T  V T  Y APE+  +     QT D++  G ++ 
Sbjct: 179 NEDCELKILDFGLAR-HTDDEM---TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMA 234
Query: 561 EVLSGR 566
           E+L+GR
Sbjct: 235 ELLTGR 240

>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk Docking Peptide Length = 362

Iteration: 1
 Score = 54.7 bits (130), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 51/186 (27%), Positives = 90/186 (48%), Gaps = 20/186 (10%)
Query: 389 GAEIAVKRISHENDGGTRA--FLAEISSLGRLKHKSLVGL-----RGWCKREKGSLMLVY 441
           G  +AVK++S        A     E+  L  +KH++++GL           E   + LV 
Sbjct: 49  GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 108
Query: 442 DYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLL 501
             M  G+    I +C     L+ +    ++  +  G+ Y+H      ++HRD+K SN+ +
Sbjct: 109 HLM--GADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAV 160
Query: 502 DKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQT-DVFGFGILIL 560
           +++   ++ DFGLAR H   ++   T  V T  Y APE+  +     QT D++  G ++ 
Sbjct: 161 NEDSELKILDFGLAR-HTDDEM---TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMA 216
Query: 561 EVLSGR 566
           E+L+GR
Sbjct: 217 ELLTGR 222

>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor Length = 383

Iteration: 1
 Score = 54.7 bits (130), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 51/186 (27%), Positives = 90/186 (48%), Gaps = 20/186 (10%)
Query: 389 GAEIAVKRISHENDGGTRA--FLAEISSLGRLKHKSLVGL-----RGWCKREKGSLMLVY 441
           G  +AVK++S        A     E+  L  +KH++++GL           E   + LV 
Sbjct: 70  GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 129
Query: 442 DYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLL 501
             M  G+    I +C     L+ +    ++  +  G+ Y+H      ++HRD+K SN+ +
Sbjct: 130 HLM--GADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAV 181
Query: 502 DKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQT-DVFGFGILIL 560
           +++   ++ DFGLAR H   ++   T  V T  Y APE+  +     QT D++  G ++ 
Sbjct: 182 NEDCELKILDFGLAR-HTDDEM---TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMA 237
Query: 561 EVLSGR 566
           E+L+GR
Sbjct: 238 ELLTGR 243

>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499 Length = 372

Iteration: 1
 Score = 54.7 bits (130), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 51/186 (27%), Positives = 90/186 (48%), Gaps = 20/186 (10%)
Query: 389 GAEIAVKRISHENDGGTRA--FLAEISSLGRLKHKSLVGL-----RGWCKREKGSLMLVY 441
           G  +AVK++S        A     E+  L  +KH++++GL           E   + LV 
Sbjct: 59  GLRVAVKKLSKPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 118
Query: 442 DYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLL 501
             M  G+    I +C     L+ +    ++  +  G+ Y+H      ++HRD+K SN+ +
Sbjct: 119 HLM--GADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAV 170
Query: 502 DKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQT-DVFGFGILIL 560
           +++   ++ DFGLAR H   ++   T  V T  Y APE+  +     QT D++  G ++ 
Sbjct: 171 NEDCELKILDFGLAR-HTDDEM---TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMA 226
Query: 561 EVLSGR 566
           E+L+GR
Sbjct: 227 ELLTGR 232

>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l) Activating Mutant Length = 367

Iteration: 1
 Score = 54.7 bits (130), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 51/186 (27%), Positives = 90/186 (48%), Gaps = 20/186 (10%)
Query: 389 GAEIAVKRISHENDGGTRA--FLAEISSLGRLKHKSLVGL-----RGWCKREKGSLMLVY 441
           G  +AVK++S        A     E+  L  +KH++++GL           E   + LV 
Sbjct: 54  GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 113
Query: 442 DYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLL 501
             M  G+    I +C     L+ +    ++  +  G+ Y+H      ++HRD+K SN+ +
Sbjct: 114 HLM--GADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAV 165
Query: 502 DKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQT-DVFGFGILIL 560
           +++   ++ DFGLAR H   ++   T  V T  Y APE+  +     QT D++  G ++ 
Sbjct: 166 NEDCELKILDFGLAR-HTADEM---TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMA 221
Query: 561 EVLSGR 566
           E+L+GR
Sbjct: 222 ELLTGR 227

>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha Length = 389

Iteration: 1
 Score = 54.7 bits (130), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 51/187 (27%), Positives = 90/187 (48%), Gaps = 20/187 (10%)
Query: 388 GGAEIAVKRISHENDGGTRA--FLAEISSLGRLKHKSLVGL-----RGWCKREKGSLMLV 440
            G +IAVK++S        A     E+  L  +KH++++GL           E   + LV
Sbjct: 75  SGLKIAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPATSLEEFNDVYLV 134
Query: 441 YDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVL 500
              M  G+    I +C     L+ +    ++  +  G+ Y+H      ++HRD+K SN+ 
Sbjct: 135 THLM--GADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLA 186
Query: 501 LDKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQT-DVFGFGILI 559
           ++++   ++ DFGLAR H   ++   T  V T  Y APE+  +      T D++  G ++
Sbjct: 187 VNEDCELKILDFGLAR-HTDDEM---TGYVATRWYRAPEIMLNWMHYNMTVDIWSVGCIM 242
Query: 560 LEVLSGR 566
            E+L+GR
Sbjct: 243 AELLTGR 249

>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The Death Associated Protein Kinase Catalytic Domain With Amppnp Length = 295

Iteration: 1
 Score = 54.7 bits (130), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 48/189 (25%), Positives = 88/189 (46%), Gaps = 14/189 (7%)
Query: 385 LEGGGAEIAVKRISHENDGGTRAFLA-EISSLGRLKHKSLVGLRGWCKREKGSLMLVYDY 443
           L+     I  +R      G +R  +  E+S L  ++H +++ L       K  ++L+ + 
Sbjct: 37  LQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHE-VYENKTDVILILEL 95
Query: 444 MENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNV-LLD 502
           +  G L  ++ + +    L+ EE    LK +  GV YLH     ++ H D+K  N+ LLD
Sbjct: 96  VAGGELFDFLAEKES---LTEEEATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLD 149
Query: 503 KEMNG---RLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILI 559
           + +     ++ DFGLA     G       + GT  ++APE+ +      + D++  G++ 
Sbjct: 150 RNVPKPRIKIIDFGLAHKIDFGN--EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVIT 207
Query: 560 LEVLSGRRP 568
             +LSG  P
Sbjct: 208 YILLSGASP 216

>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In Complex With Novel Allosteric Inhibitor Length = 304

Iteration: 1
 Score = 54.7 bits (130), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 48/194 (24%), Positives = 88/194 (45%), Gaps = 9/194 (4%)
Query: 386 EGGGAEIAVKRISHENDGGTR-AFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYM 444
           E     +A+K   +      R  FL E  ++ +  H  +V L G     +  + ++ +  
Sbjct: 63  ENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT--ENPVWIIMELC 120
Query: 445 ENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKE 504
             G L  ++     S+ L+    I     ++  + YL     K+ +HRDI + NVL+   
Sbjct: 121 TLGELRSFLQVRKYSLDLA--SLILYAYQLSTALAYLES---KRFVHRDIAARNVLVSSN 175
Query: 505 MNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVL- 563
              +LGDFGL+R          ++    + ++APE  +  R ++ +DV+ FG+ + E+L 
Sbjct: 176 DCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILM 235
Query: 564 SGRRPIEEGKPNLV 577
            G +P +  K N V
Sbjct: 236 HGVKPFQGVKNNDV 249

>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655 Length = 379

Iteration: 1
 Score = 54.7 bits (130), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 51/186 (27%), Positives = 90/186 (48%), Gaps = 20/186 (10%)
Query: 389 GAEIAVKRISHENDGGTRA--FLAEISSLGRLKHKSLVGL-----RGWCKREKGSLMLVY 441
           G  +AVK++S        A     E+  L  +KH++++GL           E   + LV 
Sbjct: 66  GHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 125
Query: 442 DYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLL 501
             M  G+    I +C     L+ +    ++  +  G+ Y+H      ++HRD+K SN+ +
Sbjct: 126 HLM--GADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAV 177
Query: 502 DKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQT-DVFGFGILIL 560
           +++   ++ DFGLAR H   ++   T  V T  Y APE+  +     QT D++  G ++ 
Sbjct: 178 NEDCELKILDFGLAR-HTDDEM---TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMA 233
Query: 561 EVLSGR 566
           E+L+GR
Sbjct: 234 ELLTGR 239

>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With Bis- Anilino Pyrimidine Inhibitor Length = 276

Iteration: 1
 Score = 54.7 bits (130), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 48/194 (24%), Positives = 88/194 (45%), Gaps = 9/194 (4%)
Query: 386 EGGGAEIAVKRISHENDGGTR-AFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYM 444
           E     +A+K   +      R  FL E  ++ +  H  +V L G     +  + ++ +  
Sbjct: 35  ENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT--ENPVWIIMELC 92
Query: 445 ENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKE 504
             G L  ++     S+ L+    I     ++  + YL     K+ +HRDI + NVL+   
Sbjct: 93  TLGELRSFLQVRKYSLDLA--SLILYAYQLSTALAYLES---KRFVHRDIAARNVLVSSN 147
Query: 505 MNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVL- 563
              +LGDFGL+R          ++    + ++APE  +  R ++ +DV+ FG+ + E+L 
Sbjct: 148 DCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILM 207
Query: 564 SGRRPIEEGKPNLV 577
            G +P +  K N V
Sbjct: 208 HGVKPFQGVKNNDV 221

>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain Length = 402

Iteration: 1
 Score = 54.7 bits (130), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 32/85 (37%), Positives = 46/85 (54%), Gaps = 6/85 (7%)
Query: 489 VLHRDIKSSNVLLDKEMNGRLGDFGLA-RMHGHGQVASTTRVVGTVGYLAPEVFSS---- 543
           ++HRD+K  N+LLDK  + +L DFG   +M   G V   T  VGT  Y++PEV  S    
Sbjct: 195 LIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETGMVHCDT-AVGTPDYISPEVLKSQGGD 253
Query: 544 GRASTQTDVFGFGILILEVLSGRRP 568
           G    + D +  G+ + E+L G  P
Sbjct: 254 GYYGRECDWWSVGVFLFEMLVGDTP 278

>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib Length = 336

Iteration: 1
 Score = 54.7 bits (130), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 49/176 (27%), Positives = 79/176 (44%), Gaps = 30/176 (17%)
Query: 473 DVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRVVGT 532
            VA G+ +L     K  +HRD+ + N+LL      ++ DFGLAR   H +  S   V G 
Sbjct: 176 QVAKGMAFLAS---KNCIHRDLAARNILLTHGRITKICDFGLAR---HIKNDSNYVVKGN 229
Query: 533 ----VGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGK 588
               V ++APE   +   + ++DV+ +GI + E+ S       G P  V+  +  M+   
Sbjct: 230 ARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMP--VDSKFYKMI--- 284
Query: 589 XXXXXXXXXXXKGGF----DEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLEGKI 640
                      K GF     E     +  +   C   DP  RPT +Q+V+++E +I
Sbjct: 285 -----------KEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQI 329

>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And Kinase Domains Of Focal Adhesion Kinase. Length = 276

Iteration: 1
 Score = 54.3 bits (129), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 48/194 (24%), Positives = 88/194 (45%), Gaps = 9/194 (4%)
Query: 386 EGGGAEIAVKRISHENDGGTR-AFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYM 444
           E     +A+K   +      R  FL E  ++ +  H  +V L G     +  + ++ +  
Sbjct: 35  ENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT--ENPVWIIMELC 92
Query: 445 ENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKE 504
             G L  ++     S+ L+    I     ++  + YL     K+ +HRDI + NVL+   
Sbjct: 93  TLGELRSFLQVRKYSLDLA--SLILYAYQLSTALAYLES---KRFVHRDIAARNVLVSSN 147
Query: 505 MNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVL- 563
              +LGDFGL+R          ++    + ++APE  +  R ++ +DV+ FG+ + E+L 
Sbjct: 148 DCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILM 207
Query: 564 SGRRPIEEGKPNLV 577
            G +P +  K N V
Sbjct: 208 HGVKPFQGVKNNDV 221

>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In Complex With A Ruthenium Octasporine Ligand (Osv) Length = 285

Iteration: 1
 Score = 54.3 bits (129), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 48/189 (25%), Positives = 88/189 (46%), Gaps = 14/189 (7%)
Query: 385 LEGGGAEIAVKRISHENDGGTRAFLA-EISSLGRLKHKSLVGLRGWCKREKGSLMLVYDY 443
           L+     I  +R      G +R  +  E+S L  ++H +++ L       K  ++L+ + 
Sbjct: 37  LQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHE-VYENKTDVILILEL 95
Query: 444 MENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNV-LLD 502
           +  G L  ++ + +    L+ EE    LK +  GV YLH     ++ H D+K  N+ LLD
Sbjct: 96  VAGGELFDFLAEKES---LTEEEATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLD 149
Query: 503 KEMNG---RLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILI 559
           + +     ++ DFGLA     G       + GT  ++APE+ +      + D++  G++ 
Sbjct: 150 RNVPKPRIKIIDFGLAHKIDFGN--EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVIT 207
Query: 560 LEVLSGRRP 568
             +LSG  P
Sbjct: 208 YILLSGASP 216

>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3 Length = 308

Iteration: 1
 Score = 54.3 bits (129), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 46/166 (27%), Positives = 84/166 (50%), Gaps = 15/166 (9%)
Query: 411 EISSLGRLK---HKSLVGLRGWCKREKGS----LMLVYDYMENGSLDKWIFQCDGSMMLS 463
           E++ L RL+   H ++V L   C   +      + LV+++++   L  ++ +      L 
Sbjct: 61  EVALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPG-LP 118
Query: 464 CEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQV 523
            E    +++    G+ +LH      ++HRD+K  N+L+      +L DFGLAR++ + Q+
Sbjct: 119 AETIKDLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSY-QM 174
Query: 524 ASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPI 569
           A T  VV T+ Y APEV      +T  D++  G +  E+   R+P+
Sbjct: 175 ALTP-VVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFR-RKPL 218

>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A Methanesulfonamide Diaminopyrimidine Inhibitor Length = 276

Iteration: 1
 Score = 54.3 bits (129), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 48/194 (24%), Positives = 88/194 (45%), Gaps = 9/194 (4%)
Query: 386 EGGGAEIAVKRISHENDGGTR-AFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYM 444
           E     +A+K   +      R  FL E  ++ +  H  +V L G     +  + ++ +  
Sbjct: 32  ENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT--ENPVWIIMELC 89
Query: 445 ENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKE 504
             G L  ++     S+ L+    I     ++  + YL     K+ +HRDI + NVL+   
Sbjct: 90  TLGELRSFLQVRKYSLDLA--SLILYAYQLSTALAYLES---KRFVHRDIAARNVLVSSN 144
Query: 505 MNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVL- 563
              +LGDFGL+R          ++    + ++APE  +  R ++ +DV+ FG+ + E+L 
Sbjct: 145 DCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILM 204
Query: 564 SGRRPIEEGKPNLV 577
            G +P +  K N V
Sbjct: 205 HGVKPFQGVKNNDV 218

>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In Complex With Small Molecular Inhibitors Length = 278

Iteration: 1
 Score = 54.3 bits (129), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 48/189 (25%), Positives = 88/189 (46%), Gaps = 14/189 (7%)
Query: 385 LEGGGAEIAVKRISHENDGGTRAFLA-EISSLGRLKHKSLVGLRGWCKREKGSLMLVYDY 443
           L+     I  +R      G +R  +  E+S L  ++H +++ L       K  ++L+ + 
Sbjct: 37  LQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHE-VYENKTDVILILEL 95
Query: 444 MENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNV-LLD 502
           +  G L  ++ + +    L+ EE    LK +  GV YLH     ++ H D+K  N+ LLD
Sbjct: 96  VAGGELFDFLAEKES---LTEEEATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLD 149
Query: 503 KEMNG---RLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILI 559
           + +     ++ DFGLA     G       + GT  ++APE+ +      + D++  G++ 
Sbjct: 150 RNVPKPRIKIIDFGLAHKIDFGN--EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVIT 207
Query: 560 LEVLSGRRP 568
             +LSG  P
Sbjct: 208 YILLSGASP 216

>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin Length = 306

Iteration: 1
 Score = 54.3 bits (129), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 45/181 (24%), Positives = 88/181 (48%), Gaps = 15/181 (8%)
Query: 396 RISHENDGGTRAFLAEISSLGRLK---HKSLVGLRGWCKREKGS----LMLVYDYMENGS 448
           R+ +  +G   + + E++ L RL+   H ++V L   C   +      + LV+++++   
Sbjct: 38  RVPNGEEGLPISTVREVALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-D 96
Query: 449 LDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGR 508
           L  ++ +      L  E    +++    G+ +LH      ++HRD+K  N+L+      +
Sbjct: 97  LRTYLDKAPPPG-LPAETIKDLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVK 152
Query: 509 LGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRP 568
           L DFGLAR++ +    +   VV T+ Y APEV      +T  D++  G +  E+   R+P
Sbjct: 153 LADFGLARIYSYQMALAP--VVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFR-RKP 209
Query: 569 I 569
           +
Sbjct: 210 L 210

>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P- Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl- Pyridin-3-Yl)naphthalen-1-Yl]urea Length = 348

Iteration: 1
 Score = 54.3 bits (129), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 51/186 (27%), Positives = 90/186 (48%), Gaps = 20/186 (10%)
Query: 389 GAEIAVKRISHENDGGTRA--FLAEISSLGRLKHKSLVGL-----RGWCKREKGSLMLVY 441
           G  +AVK++S        A     E+  L  +KH++++GL           E   + LV 
Sbjct: 43  GHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 102
Query: 442 DYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLL 501
             M  G+    I +C     L+ +    ++  +  G+ Y+H      ++HRD+K SN+ +
Sbjct: 103 HLM--GADLNNIVKC---AKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAV 154
Query: 502 DKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQT-DVFGFGILIL 560
           +++   ++ DFGLAR H   ++   T  V T  Y APE+  +     QT D++  G ++ 
Sbjct: 155 NEDCELKILDFGLAR-HTDDEM---TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMA 210
Query: 561 EVLSGR 566
           E+L+GR
Sbjct: 211 ELLTGR 216

>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277 Length = 277

Iteration: 1
 Score = 54.3 bits (129), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 48/189 (25%), Positives = 88/189 (46%), Gaps = 14/189 (7%)
Query: 385 LEGGGAEIAVKRISHENDGGTRAFLA-EISSLGRLKHKSLVGLRGWCKREKGSLMLVYDY 443
           L+     I  +R      G +R  +  E+S L  ++H +++ L       K  ++L+ + 
Sbjct: 37  LQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHE-VYENKTDVILILEL 95
Query: 444 MENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNV-LLD 502
           +  G L  ++ + +    L+ EE    LK +  GV YLH     ++ H D+K  N+ LLD
Sbjct: 96  VAGGELFDFLAEKES---LTEEEATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLD 149
Query: 503 KEMNG---RLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILI 559
           + +     ++ DFGLA     G       + GT  ++APE+ +      + D++  G++ 
Sbjct: 150 RNVPKPRIKIIDFGLAHKIDFGN--EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVIT 207
Query: 560 LEVLSGRRP 568
             +LSG  P
Sbjct: 208 YILLSGASP 216

>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase Containing The Ferm And Kinase Domains Length = 656

Iteration: 1
 Score = 54.3 bits (129), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 48/194 (24%), Positives = 88/194 (45%), Gaps = 9/194 (4%)
Query: 386 EGGGAEIAVKRISHENDGGTR-AFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYM 444
           E     +A+K   +      R  FL E  ++ +  H  +V L G     +  + ++ +  
Sbjct: 415 ENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT--ENPVWIIMELC 472
Query: 445 ENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKE 504
             G L  ++     S+ L+    I     ++  + YL     K+ +HRDI + NVL+   
Sbjct: 473 TLGELRSFLQVRKFSLDLA--SLILYAYQLSTALAYLES---KRFVHRDIAARNVLVSSN 527
Query: 505 MNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVL- 563
              +LGDFGL+R          ++    + ++APE  +  R ++ +DV+ FG+ + E+L 
Sbjct: 528 DCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILM 587
Query: 564 SGRRPIEEGKPNLV 577
            G +P +  K N V
Sbjct: 588 HGVKPFQGVKNNDV 601

>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632 Length = 350

Iteration: 1
 Score = 54.3 bits (129), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 36/110 (32%), Positives = 58/110 (52%), Gaps = 12/110 (10%)
Query: 480 YLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLA-RMHGHGQVASTTRVVGTVGYLAP 538
           YLH      +++RD+K  N+L+D++   ++ DFG A R+ G      T  + GT  YLAP
Sbjct: 156 YLHS---LDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGR-----TWXLCGTPEYLAP 207
Query: 539 EVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGK 588
           E+  S   +   D +  G+LI E+ +G  P    +P     ++E +V GK
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPI---QIYEKIVSGK 254

>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative Length = 281

Iteration: 1
 Score = 54.3 bits (129), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 34/113 (30%), Positives = 60/113 (53%), Gaps = 8/113 (7%)
Query: 473 DVAAGVLYLHEG-------WEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVAS 525
           D+A+ +LY ++          K+ +HRDI + NVL+      +LGDFGL+R         
Sbjct: 111 DLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYK 170
Query: 526 TTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVL-SGRRPIEEGKPNLV 577
            ++    + ++APE  +  R ++ +DV+ FG+ + E+L  G +P +  K N V
Sbjct: 171 ASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDV 223

>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With Y- 27632 Length = 350

Iteration: 1
 Score = 54.3 bits (129), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 36/110 (32%), Positives = 58/110 (52%), Gaps = 12/110 (10%)
Query: 480 YLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLA-RMHGHGQVASTTRVVGTVGYLAP 538
           YLH      +++RD+K  N+L+D++   ++ DFG A R+ G      T  + GT  YLAP
Sbjct: 156 YLHS---LDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGR-----TWXLCGTPEYLAP 207
Query: 539 EVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGK 588
           E+  S   +   D +  G+LI E+ +G  P    +P     ++E +V GK
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPI---QIYEKIVSGK 254

>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With Bis- Anilino Pyrimidine Inhibitor Length = 276

Iteration: 1
 Score = 54.3 bits (129), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 48/194 (24%), Positives = 88/194 (45%), Gaps = 9/194 (4%)
Query: 386 EGGGAEIAVKRISHENDGGTR-AFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYM 444
           E     +A+K   +      R  FL E  ++ +  H  +V L G     +  + ++ +  
Sbjct: 35  ENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT--ENPVWIIMELC 92
Query: 445 ENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKE 504
             G L  ++     S+ L+    I     ++  + YL     K+ +HRDI + NVL+   
Sbjct: 93  TLGELRSFLQVRKFSLDLA--SLILYAYQLSTALAYLES---KRFVHRDIAARNVLVSAT 147
Query: 505 MNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVL- 563
              +LGDFGL+R          ++    + ++APE  +  R ++ +DV+ FG+ + E+L 
Sbjct: 148 DCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILM 207
Query: 564 SGRRPIEEGKPNLV 577
            G +P +  K N V
Sbjct: 208 HGVKPFQGVKNNDV 221

>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase Length = 350

Iteration: 1
 Score = 54.3 bits (129), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 36/110 (32%), Positives = 58/110 (52%), Gaps = 12/110 (10%)
Query: 480 YLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLA-RMHGHGQVASTTRVVGTVGYLAP 538
           YLH      +++RD+K  N+L+D++   ++ DFG A R+ G      T  + GT  YLAP
Sbjct: 156 YLHS---LDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGR-----TWXLCGTPEYLAP 207
Query: 539 EVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGK 588
           E+  S   +   D +  G+LI E+ +G  P    +P     ++E +V GK
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPI---QIYEKIVSGK 254

>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With Inhibitor Jnj- 7706621 Length = 351

Iteration: 1
 Score = 54.3 bits (129), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 33/101 (32%), Positives = 55/101 (54%), Gaps = 9/101 (8%)
Query: 489 VLHRDIKSSNVLLDKEMNGRLGDFGLA-RMHGHGQVASTTRVVGTVGYLAPEVFSSGRAS 547
           +++RD+K  N+L+D++   ++ DFG A R+ G      T  + GT  YLAPE+  S   +
Sbjct: 163 LIYRDLKPENLLIDQQGYIKVADFGFAKRVKGR-----TWXLCGTPEYLAPEIILSKGYN 217
Query: 548 TQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGK 588
              D +  G+LI E+ +G  P    +P     ++E +V GK
Sbjct: 218 KAVDWWALGVLIYEMAAGYPPFFADQPI---QIYEKIVSGK 255

>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak) Length = 281

Iteration: 1
 Score = 53.9 bits (128), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 34/113 (30%), Positives = 60/113 (53%), Gaps = 8/113 (7%)
Query: 473 DVAAGVLYLHEGW-------EKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVAS 525
           D+A+ +LY ++          K+ +HRDI + NVL+      +LGDFGL+R         
Sbjct: 114 DLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYK 173
Query: 526 TTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVL-SGRRPIEEGKPNLV 577
            ++    + ++APE  +  R ++ +DV+ FG+ + E+L  G +P +  K N V
Sbjct: 174 ASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDV 226

>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated Protein Kinase-Activated Protein Kinase 3 (Mk3)-Inhibitor Complex Length = 336

Iteration: 1
 Score = 53.9 bits (128), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 36/138 (26%), Positives = 64/138 (46%), Gaps = 10/138 (7%)
Query: 434 KGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRD 493
           K  L+++ + ME G L   I Q  G    +  E   +++D+   + +LH      + HRD
Sbjct: 98  KRCLLIIMECMEGGELFSRI-QERGDQAFTEREAAEIMRDIGTAIQFLHS---HNIAHRD 153
Query: 494 IKSSNVLL---DKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQT 550
           +K  N+L    +K+   +L DFG A+      + +      T  Y+APEV    +     
Sbjct: 154 VKPENLLYTSKEKDAVLKLTDFGFAKETTQNALQTPCY---TPYYVAPEVLGPEKYDKSC 210
Query: 551 DVFGFGILILEVLSGRRP 568
           D++  G+++  +L G  P
Sbjct: 211 DMWSLGVIMYILLCGFPP 228

>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective Inhibitors In Complex With Protein Kinase A And Mutants Length = 350

Iteration: 1
 Score = 53.9 bits (128), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 33/101 (32%), Positives = 56/101 (55%), Gaps = 9/101 (8%)
Query: 489 VLHRDIKSSNVLLDKEMNGRLGDFGLA-RMHGHGQVASTTRVVGTVGYLAPEVFSSGRAS 547
           +++RD+K  N+++D++   ++ DFGLA R+ G      T  + GT  YLAPE+  S   +
Sbjct: 162 LIYRDLKPENLMIDQQGYIKVTDFGLAKRVKGR-----TWXLCGTPEYLAPEIILSKGYN 216
Query: 548 TQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGK 588
              D +  G+LI E+ +G  P    +P     ++E +V GK
Sbjct: 217 KAVDWWALGVLIYEMAAGYPPFFADQPI---QIYEKIVSGK 254

>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With Pyrrolo[2,3- D]thiazole Length = 282

Iteration: 1
 Score = 53.9 bits (128), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 34/113 (30%), Positives = 60/113 (53%), Gaps = 8/113 (7%)
Query: 473 DVAAGVLYLHEG-------WEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVAS 525
           D+A+ +LY ++          K+ +HRDI + NVL+      +LGDFGL+R         
Sbjct: 112 DLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYK 171
Query: 526 TTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVL-SGRRPIEEGKPNLV 577
            ++    + ++APE  +  R ++ +DV+ FG+ + E+L  G +P +  K N V
Sbjct: 172 ASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDV 224

>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin Length = 306

Iteration: 1
 Score = 53.9 bits (128), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 48/190 (25%), Positives = 92/190 (48%), Gaps = 17/190 (8%)
Query: 389 GAEIAVK--RISHENDGGTRAFLAEISSLGRLK---HKSLVGLRGWCKREKGS----LML 439
           G  +A+K  R+ +  +G   + + E++ L RL+   H ++V L   C   +      + L
Sbjct: 29  GHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTL 88
Query: 440 VYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNV 499
           V+++++   L  ++ +      L  E    +++    G+ +LH      ++HRD+K  N+
Sbjct: 89  VFEHVDQ-DLRTYLDKAPPPG-LPAETIKDLMRQFLRGLDFLHANC---IVHRDLKPENI 143
Query: 500 LLDKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILI 559
           L+      +L DFGLAR++ +        VV T+ Y APEV      +T  D++  G + 
Sbjct: 144 LVTSGGTVKLADFGLARIYSYQMALDP--VVVTLWYRAPEVLLQSTYATPVDMWSVGCIF 201
Query: 560 LEVLSGRRPI 569
            E+   R+P+
Sbjct: 202 AEMFR-RKPL 210

>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b Length = 317

Iteration: 1
 Score = 53.9 bits (128), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 36/138 (26%), Positives = 64/138 (46%), Gaps = 10/138 (7%)
Query: 434 KGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRD 493
           K  L+++ + ME G L   I Q  G    +  E   +++D+   + +LH      + HRD
Sbjct: 79  KRCLLIIMECMEGGELFSRI-QERGDQAFTEREAAEIMRDIGTAIQFLHS---HNIAHRD 134
Query: 494 IKSSNVLL---DKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQT 550
           +K  N+L    +K+   +L DFG A+      + +      T  Y+APEV    +     
Sbjct: 135 VKPENLLYTSKEKDAVLKLTDFGFAKETTQNALQTPCY---TPYYVAPEVLGPEKYDKSC 191
Query: 551 DVFGFGILILEVLSGRRP 568
           D++  G+++  +L G  P
Sbjct: 192 DMWSLGVIMYILLCGFPP 209

>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase Containing The Ferm And Kinase Domains. Length = 656

Iteration: 1
 Score = 53.9 bits (128), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 48/194 (24%), Positives = 88/194 (45%), Gaps = 9/194 (4%)
Query: 386 EGGGAEIAVKRISHENDGGTR-AFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYM 444
           E     +A+K   +      R  FL E  ++ +  H  +V L G     +  + ++ +  
Sbjct: 415 ENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT--ENPVWIIMELC 472
Query: 445 ENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKE 504
             G L  ++     S+ L+    I     ++  + YL     K+ +HRDI + NVL+   
Sbjct: 473 TLGELRSFLQVRKFSLDLA--SLILYAYQLSTALAYLES---KRFVHRDIAARNVLVSAT 527
Query: 505 MNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVL- 563
              +LGDFGL+R          ++    + ++APE  +  R ++ +DV+ FG+ + E+L 
Sbjct: 528 DCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILM 587
Query: 564 SGRRPIEEGKPNLV 577
            G +P +  K N V
Sbjct: 588 HGVKPFQGVKNNDV 601

>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant Length = 334

Iteration: 1
 Score = 53.9 bits (128), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 48/189 (25%), Positives = 88/189 (46%), Gaps = 14/189 (7%)
Query: 385 LEGGGAEIAVKRISHENDGGTRAFLA-EISSLGRLKHKSLVGLRGWCKREKGSLMLVYDY 443
           L+     I  +R      G +R  +  E+S L  ++H +++ L       K  ++L+ + 
Sbjct: 37  LQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHE-VYENKTDVILILEL 95
Query: 444 MENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNV-LLD 502
           +  G L  ++ + +    L+ EE    LK +  GV YLH     ++ H D+K  N+ LLD
Sbjct: 96  VAGGELFDFLAEKES---LTEEEATEFLKQILNGVYYLHSL---QIAHFDLKPENIMLLD 149
Query: 503 KEMNG---RLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILI 559
           + +     ++ DFGLA     G       + GT  ++APE+ +      + D++  G++ 
Sbjct: 150 RNVPKPRIKIIDFGLAHKIDFGN--EFKNIFGTPAFVAPEIVNYEPLGLEADMWSIGVIT 207
Query: 560 LEVLSGRRP 568
             +LSG  P
Sbjct: 208 YILLSGASP 216

>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A Dihydroquinazolinone Length = 370

Iteration: 1
 Score = 53.9 bits (128), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 51/183 (27%), Positives = 88/183 (48%), Gaps = 18/183 (9%)
Query: 391 EIAVKRISH--ENDGGTRAFLAEISSLGRLKHKSLVGL----RGWCKREKGSLMLVYDYM 444
           ++AVK++S   ++    R    E+  L  LKH++++GL          E  S + +   +
Sbjct: 55  KVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTL 114
Query: 445 ENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKE 504
               L+  I +C     LS E    ++  +  G+ Y+H      ++HRD+K SNV ++++
Sbjct: 115 MGADLNN-IVKCQA---LSDEHVQFLVYQLLRGLKYIHSA---GIIHRDLKPSNVAVNED 167
Query: 505 MNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQT-DVFGFGILILEVL 563
              R+ DFGLAR          T  V T  Y APE+  +     QT D++  G ++ E+L
Sbjct: 168 SELRILDFGLARQADE----EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 223
Query: 564 SGR 566
            G+
Sbjct: 224 QGK 226

>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302 Length = 302

Iteration: 1
 Score = 53.9 bits (128), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 48/189 (25%), Positives = 88/189 (46%), Gaps = 14/189 (7%)
Query: 385 LEGGGAEIAVKRISHENDGGTRAFLA-EISSLGRLKHKSLVGLRGWCKREKGSLMLVYDY 443
           L+     I  +R      G +R  +  E+S L  ++H +++ L       K  ++L+ + 
Sbjct: 37  LQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHE-VYENKTDVILILEL 95
Query: 444 MENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNV-LLD 502
           +  G L  ++ + +    L+ EE    LK +  GV YLH     ++ H D+K  N+ LLD
Sbjct: 96  VAGGELFDFLAEKES---LTEEEATEFLKQILNGVYYLHSL---QIAHFDLKPENIMLLD 149
Query: 503 KEMNG---RLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILI 559
           + +     ++ DFGLA     G       + GT  ++APE+ +      + D++  G++ 
Sbjct: 150 RNVPKPRIKIIDFGLAHKIDFGN--EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVIT 207
Query: 560 LEVLSGRRP 568
             +LSG  P
Sbjct: 208 YILLSGASP 216

>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based Inhibitor Length = 383

Iteration: 1
 Score = 53.9 bits (128), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 50/186 (26%), Positives = 89/186 (47%), Gaps = 20/186 (10%)
Query: 389 GAEIAVKRISHENDGGTRA--FLAEISSLGRLKHKSLVGL-----RGWCKREKGSLMLVY 441
           G  +AVK++S        A     E+  L  +KH++++GL           E   + LV 
Sbjct: 70  GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 129
Query: 442 DYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLL 501
             M  G+    I +C     L+ +    ++  +  G+ Y+H      ++HRD+K SN+ +
Sbjct: 130 HLM--GADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAV 181
Query: 502 DKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQT-DVFGFGILIL 560
           +++   ++ DFGLAR H   ++      V T  Y APE+  +     QT D++  G ++ 
Sbjct: 182 NEDCELKILDFGLAR-HTDDEMXG---YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMA 237
Query: 561 EVLSGR 566
           E+L+GR
Sbjct: 238 ELLTGR 243

>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent Protein Kinase Ii Gamma Length = 336

Iteration: 1
 Score = 53.9 bits (128), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 46/167 (27%), Positives = 78/167 (46%), Gaps = 12/167 (7%)
Query: 418 LKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAG 477
           LKH ++V L      E+G   LV+D +  G L + I         S  +    +  +   
Sbjct: 87  LKHPNIVRLHDSIS-EEGFHYLVFDLVTGGELFEDIV---AREYYSEADASHCIHQILES 142
Query: 478 VLYLHEGWEKKVLHRDIKSSNVLLDKEMNG---RLGDFGLARMHGHGQVASTTRVVGTVG 534
           V ++H+     ++HRD+K  N+LL  +  G   +L DFGLA +   G+  +     GT G
Sbjct: 143 VNHIHQ---HDIVHRDLKPENLLLASKCKGAAVKLADFGLA-IEVQGEQQAWFGFAGTPG 198
Query: 535 YLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPI-EEGKPNLVEMV 580
           YL+PEV          D++  G+++  +L G  P  +E +  L + +
Sbjct: 199 YLSPEVLRKDPYGKPVDIWACGVILYILLVGYPPFWDEDQHKLYQQI 245

>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360

Iteration: 1
 Score = 53.9 bits (128), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 50/186 (26%), Positives = 90/186 (48%), Gaps = 20/186 (10%)
Query: 389 GAEIAVKRISHENDGGTRA--FLAEISSLGRLKHKSLVGL-----RGWCKREKGSLMLVY 441
           G  +AVK++S        A     E+  L  +KH++++GL           E   + LV 
Sbjct: 47  GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 106
Query: 442 DYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLL 501
             M  G+    I +C     L+ +    ++  +  G+ Y+H      ++HRD+K SN+ +
Sbjct: 107 HLM--GADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAV 158
Query: 502 DKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQT-DVFGFGILIL 560
           +++   ++ D+GLAR H   ++   T  V T  Y APE+  +     QT D++  G ++ 
Sbjct: 159 NEDCELKILDYGLAR-HTDDEM---TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMA 214
Query: 561 EVLSGR 566
           E+L+GR
Sbjct: 215 ELLTGR 220

>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312 Length = 312

Iteration: 1
 Score = 53.9 bits (128), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 48/189 (25%), Positives = 88/189 (46%), Gaps = 14/189 (7%)
Query: 385 LEGGGAEIAVKRISHENDGGTRAFLA-EISSLGRLKHKSLVGLRGWCKREKGSLMLVYDY 443
           L+     I  +R      G +R  +  E+S L  ++H +++ L       K  ++L+ + 
Sbjct: 37  LQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHE-VYENKTDVILILEL 95
Query: 444 MENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNV-LLD 502
           +  G L  ++ + +    L+ EE    LK +  GV YLH     ++ H D+K  N+ LLD
Sbjct: 96  VAGGELFDFLAEKES---LTEEEATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLD 149
Query: 503 KEMNG---RLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILI 559
           + +     ++ DFGLA     G       + GT  ++APE+ +      + D++  G++ 
Sbjct: 150 RNVPKPRIKIIDFGLAHKIDFGN--EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVIT 207
Query: 560 LEVLSGRRP 568
             +LSG  P
Sbjct: 208 YILLSGASP 216

>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of Camp-Dependent Protein Kinase And An Inhibitor Peptide Displays An Open Conformation Length = 350

Iteration: 1
 Score = 53.9 bits (128), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 47/160 (29%), Positives = 76/160 (47%), Gaps = 21/160 (13%)
Query: 439 LVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKD-----VAAGVL----YLHEGWEKKV 489
           L Y + +N +L   +    G  M S   RI    +      AA ++    YLH      +
Sbjct: 106 LEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS---LDL 162
Query: 490 LHRDIKSSNVLLDKEMNGRLGDFGLA-RMHGHGQVASTTRVVGTVGYLAPEVFSSGRAST 548
           ++RD+K  N+L+D++   ++ DFG A R+ G      T  + GT  YLAPE+  S   + 
Sbjct: 163 IYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-----TWXLCGTPEYLAPEIILSKGYNK 217
Query: 549 QTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGK 588
             D +  G+LI E+ +G  P    +P     ++E +V GK
Sbjct: 218 AVDWWALGVLIYEMAAGYPPFFADQPI---QIYEKIVSGK 254

>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304 Length = 326

Iteration: 1
 Score = 53.9 bits (128), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 47/182 (25%), Positives = 86/182 (47%), Gaps = 14/182 (7%)
Query: 392 IAVKRISHENDGGTRAFLA-EISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLD 450
           I  +R      G +R  +  E+S L  ++H +++ L       K  ++L+ + +  G L 
Sbjct: 44  IKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHE-VYENKTDVILILELVAGGELF 102
Query: 451 KWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNV-LLDKEMNG-- 507
            ++ + +    L+ EE    LK +  GV YLH     ++ H D+K  N+ LLD+ +    
Sbjct: 103 DFLAEKES---LTEEEATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPR 156
Query: 508 -RLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGR 566
            ++ DFGLA     G       + GT  ++APE+ +      + D++  G++   +LSG 
Sbjct: 157 IKIIDFGLAHKIDFGN--EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGA 214
Query: 567 RP 568
            P
Sbjct: 215 SP 216

>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit (E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24) Isoelectric Variant Ca) And Mn2+ Adenylyl Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c Length = 350

Iteration: 1
 Score = 53.9 bits (128), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 47/160 (29%), Positives = 76/160 (47%), Gaps = 21/160 (13%)
Query: 439 LVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKD-----VAAGVL----YLHEGWEKKV 489
           L Y + +N +L   +    G  M S   RI    +      AA ++    YLH      +
Sbjct: 106 LEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS---LDL 162
Query: 490 LHRDIKSSNVLLDKEMNGRLGDFGLA-RMHGHGQVASTTRVVGTVGYLAPEVFSSGRAST 548
           ++RD+K  N+L+D++   ++ DFG A R+ G      T  + GT  YLAPE+  S   + 
Sbjct: 163 IYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-----TWXLCGTPEYLAPEIILSKGYNK 217
Query: 549 QTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGK 588
             D +  G+LI E+ +G  P    +P     ++E +V GK
Sbjct: 218 AVDWWALGVLIYEMAAGYPPFFADQPI---QIYEKIVSGK 254

>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit Of Camp- Dependent Protein Kinase Reveal Open And Closed Conformations Length = 350

Iteration: 1
 Score = 53.5 bits (127), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 47/160 (29%), Positives = 76/160 (47%), Gaps = 21/160 (13%)
Query: 439 LVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKD-----VAAGVL----YLHEGWEKKV 489
           L Y + +N +L   +    G  M S   RI    +      AA ++    YLH      +
Sbjct: 106 LEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS---LDL 162
Query: 490 LHRDIKSSNVLLDKEMNGRLGDFGLA-RMHGHGQVASTTRVVGTVGYLAPEVFSSGRAST 548
           ++RD+K  N+L+D++   ++ DFG A R+ G      T  + GT  YLAPE+  S   + 
Sbjct: 163 IYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-----TWXLCGTPEYLAPEIILSKGYNK 217
Query: 549 QTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGK 588
             D +  G+LI E+ +G  P    +P     ++E +V GK
Sbjct: 218 AVDWWALGVLIYEMAAGYPPFFADQPI---QIYEKIVSGK 254

>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered N- Terminal Helix Length = 350

Iteration: 1
 Score = 53.5 bits (127), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 33/101 (32%), Positives = 56/101 (55%), Gaps = 9/101 (8%)
Query: 489 VLHRDIKSSNVLLDKEMNGRLGDFGLA-RMHGHGQVASTTRVVGTVGYLAPEVFSSGRAS 547
           +++RD+K  N+++D++   ++ DFGLA R+ G      T  + GT  YLAPE+  S   +
Sbjct: 162 LIYRDLKPENLMIDQQGYIQVTDFGLAKRVKGR-----TWXLCGTPEYLAPEIILSKGYN 216
Query: 548 TQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGK 588
              D +  G+LI E+ +G  P    +P     ++E +V GK
Sbjct: 217 KAVDWWALGVLIYEMAAGYPPFFADQPI---QIYEKIVSGK 254

>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase Length = 380

Iteration: 1
 Score = 53.5 bits (127), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 50/186 (26%), Positives = 89/186 (47%), Gaps = 20/186 (10%)
Query: 389 GAEIAVKRISHENDGGTRA--FLAEISSLGRLKHKSLVGL-----RGWCKREKGSLMLVY 441
           G  +AVK++S        A     E+  L  +KH++++GL           E   + LV 
Sbjct: 67  GHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 126
Query: 442 DYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLL 501
             M  G+    I +C     L+ +    ++  +  G+ Y+H      ++HRD+K SN+ +
Sbjct: 127 HLM--GADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAV 178
Query: 502 DKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQT-DVFGFGILIL 560
           +++   ++ DFGLAR H   ++      V T  Y APE+  +     QT D++  G ++ 
Sbjct: 179 NEDCELKILDFGLAR-HTDDEMXGX---VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMA 234
Query: 561 EVLSGR 566
           E+L+GR
Sbjct: 235 ELLTGR 240

>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine Length = 295

Iteration: 1
 Score = 53.5 bits (127), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 48/189 (25%), Positives = 88/189 (46%), Gaps = 14/189 (7%)
Query: 385 LEGGGAEIAVKRISHENDGGTRAFLA-EISSLGRLKHKSLVGLRGWCKREKGSLMLVYDY 443
           L+     I  +R      G +R  +  E+S L  ++H +++ L       K  ++L+ + 
Sbjct: 37  LQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHE-VYENKTDVILIGEL 95
Query: 444 MENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNV-LLD 502
           +  G L  ++ + +    L+ EE    LK +  GV YLH     ++ H D+K  N+ LLD
Sbjct: 96  VAGGELFDFLAEKES---LTEEEATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLD 149
Query: 503 KEMNG---RLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILI 559
           + +     ++ DFGLA     G       + GT  ++APE+ +      + D++  G++ 
Sbjct: 150 RNVPKPRIKIIDFGLAHKIDFGN--EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVIT 207
Query: 560 LEVLSGRRP 568
             +LSG  P
Sbjct: 208 YILLSGASP 216

>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin Length = 306

Iteration: 1
 Score = 53.5 bits (127), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 50/190 (26%), Positives = 95/190 (50%), Gaps = 17/190 (8%)
Query: 389 GAEIAVK--RISHENDGGTRAFLAEISSLGRLK---HKSLVGLRGWCKREKGS----LML 439
           G  +A+K  R+ +  +G   + + E++ L RL+   H ++V L   C   +      + L
Sbjct: 29  GHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTL 88
Query: 440 VYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNV 499
           V+++++   L  ++ +      L  E    +++    G+ +LH      ++HRD+K  N+
Sbjct: 89  VFEHVDQ-DLRTYLDKAPPPG-LPAETIKDLMRQFLRGLDFLHANC---IVHRDLKPENI 143
Query: 500 LLDKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILI 559
           L+      +L DFGLAR++ + Q+A    VV T+ Y APEV      +T  D++  G + 
Sbjct: 144 LVTSGGTVKLADFGLARIYSY-QMALFP-VVVTLWYRAPEVLLQSTYATPVDMWSVGCIF 201
Query: 560 LEVLSGRRPI 569
            E+   R+P+
Sbjct: 202 AEMFR-RKPL 210

>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer Length = 319

Iteration: 1
 Score = 53.1 bits (126), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 50/211 (23%), Positives = 96/211 (45%), Gaps = 26/211 (12%)
Query: 388 GGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENG 447
           G   I +  I  +N+   +AF  E+ +  + +H+++V   G C      L ++    +  
Sbjct: 56  GEVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACM-SPPHLAIITSLCKGR 114
Query: 448 SLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNG 507
           +L  +    D  ++L   +  ++ +++  G+ YLH    K +LH+D+KS NV  D   NG
Sbjct: 115 TL--YSVVRDAKIVLDVNKTRQIAQEIVKGMGYLHA---KGILHKDLKSKNVFYD---NG 166
Query: 508 R--LGDFGLARMHG---HGQVASTTRVV-GTVGYLAPEVFSSGRASTQ---------TDV 552
           +  + DFGL  + G    G+     R+  G + +LAPE+       T+         +DV
Sbjct: 167 KVVITDFGLFSISGVLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDV 226
Query: 553 FGFGILILEVLSGRRPIEEGKPNLVEMVWEL 583
           F  G +  E+ +   P +      +  +W++
Sbjct: 227 FALGTIWYELHAREWPFKTQPAEAI--IWQM 255

>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2 Length = 360

Iteration: 1
 Score = 53.1 bits (126), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 54/187 (28%), Positives = 85/187 (45%), Gaps = 24/187 (12%)
Query: 389 GAEIAVKRISHENDGGTRAFLA--EISSLGRLKHKSLVGLRGWCKREKG--SLMLVYDYM 444
           G  +AVK++S      T A  A  E+  L  + HK+++ L      +K       VY  M
Sbjct: 47  GINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKTLEEFQDVYLVM 106
Query: 445 E--NGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLD 502
           E  + +L + I      M L  E    +L  +  G+ +LH      ++HRD+K SN+++ 
Sbjct: 107 ELMDANLCQVI-----HMELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVK 158
Query: 503 KEMNGRLGDFGLARMHGHGQVAST----TRVVGTVGYLAPEVFSSGRASTQTDVFGFGIL 558
            +   ++ DFGLAR       AST    T  V T  Y APEV          D++  G +
Sbjct: 159 SDCTLKILDFGLAR------TASTNFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCI 212
Query: 559 ILEVLSG 565
           + E++ G
Sbjct: 213 MGELVKG 219

>pdb|1GSL|A Chain A, Lectin (Fourth Isolated From (Griffonia Simplicifolia)) Complex With Y Human Blood Group Determinant Length = 243

Iteration: 1
 Score = 53.1 bits (126), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 57/196 (29%), Positives = 80/196 (40%), Gaps = 31/196 (15%)
Query: 83  FSTSFIFAMAPYKGVLAGHGLVFLFVPFHGIKGATEAQHLGLF-NRTNDGNSSNHVFGVE 141
           F TSF F +  Y G     GL F   P            LGLF + T    S N V  VE
Sbjct: 72  FYTSFTFLLKNY-GAPTADGLAFFLAPVDS-SVKDYGGFLGLFRHETAADPSKNQVVAVE 129
Query: 142 FDVFKNQEFNDIDENHVGIDVNSLTSVSAHAAGYWPDNQXXXXXXXXXXXXXXXEKSFKE 201
           FD + N+++ND    H+GIDVNS+ SV   A   W ++                      
Sbjct: 130 FDTWINKDWNDPPYPHIGIDVNSIVSV---ATTRWENDDAYGSSIATAH----------- 175
Query: 202 LKLNNGKNYQVWIDYADSFINITMVEAGMKRPKRPLLSVPLNLSGVLEDEMYVGFTAATG 261
                       I Y D+   I  V    +  +  +LS  ++L+ VL  ++ +GF+A  G
Sbjct: 176 ------------ITY-DARSKILTVLLSYEHGRDYILSHVVDLAKVLPQKVRIGFSAGVG 222
Query: 262 QLVESHKILAWSFSNT 277
              E   IL+W F +T
Sbjct: 223 -YDEVTYILSWHFFST 237

>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit Of Camp- Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 53.1 bits (126), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 36/110 (32%), Positives = 58/110 (52%), Gaps = 12/110 (10%)
Query: 480 YLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLA-RMHGHGQVASTTRVVGTVGYLAP 538
           YLH      +++RD+K  N+L+D++   ++ DFG A R+ G      T  + GT  YLAP
Sbjct: 156 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-----TWXLCGTPEYLAP 207
Query: 539 EVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGK 588
           E+  S   +   D +  G+LI E+ +G  P    +P     ++E +V GK
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPI---QIYEKIVSGK 254

>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin Antagonistically Control The Nuclear Shuttling Of Nfat4 Length = 386

Iteration: 1
 Score = 53.1 bits (126), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 49/180 (27%), Positives = 83/180 (46%), Gaps = 16/180 (8%)
Query: 392 IAVKRISHENDGGTRAFLA--EISSLGRLKHKSLVGLRGWCKREKG--SLMLVYDYME-- 445
           +A+K++S      T A  A  E+  +  + HK+++GL      +K       VY  ME  
Sbjct: 54  VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM 113
Query: 446 NGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEM 505
           + +L + I      M L  E    +L  +  G+ +LH      ++HRD+K SN+++  + 
Sbjct: 114 DANLCQVI-----QMELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDC 165
Query: 506 NGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSG 565
             ++ DFGLAR  G   +      V T  Y APEV          D++  G ++ E++ G
Sbjct: 166 TLKILDFGLARTAGTSFM--MVPFVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 223

>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent Protein Kinase With Unphosphorylated Activation Loop Length = 371

Iteration: 1
 Score = 53.1 bits (126), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 36/110 (32%), Positives = 59/110 (53%), Gaps = 12/110 (10%)
Query: 480 YLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLA-RMHGHGQVASTTRVVGTVGYLAP 538
           YLH      +++RD+K  N+L+D++   ++ DFG A R+ G     +T  + GT  YLAP
Sbjct: 177 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-----ATWTLCGTPEYLAP 228
Query: 539 EVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGK 588
           E+  S   +   D +  G+LI E+ +G  P    +P     ++E +V GK
Sbjct: 229 EIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPI---QIYEKIVSGK 275

>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant Catalytic Subunit Of Camp-Dependent Protein Kinase Complexed With The Peptide Inhibitor Pki(5-24) And Adenosine Length = 350

Iteration: 1
 Score = 53.1 bits (126), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 36/110 (32%), Positives = 58/110 (52%), Gaps = 12/110 (10%)
Query: 480 YLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLA-RMHGHGQVASTTRVVGTVGYLAP 538
           YLH      +++RD+K  N+L+D++   ++ DFG A R+ G      T  + GT  YLAP
Sbjct: 156 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-----TWXLCGTPEYLAP 207
Query: 539 EVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGK 588
           E+  S   +   D +  G+LI E+ +G  P    +P     ++E +V GK
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPI---QIYEKIVSGK 254

>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 53.1 bits (126), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 36/110 (32%), Positives = 58/110 (52%), Gaps = 12/110 (10%)
Query: 480 YLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLA-RMHGHGQVASTTRVVGTVGYLAP 538
           YLH      +++RD+K  N+L+D++   ++ DFG A R+ G      T  + GT  YLAP
Sbjct: 156 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-----TWXLCGTPEYLAP 207
Query: 539 EVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGK 588
           E+  S   +   D +  G+LI E+ +G  P    +P     ++E +V GK
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPI---QIYEKIVSGK 254

>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To Hydroxyfasudil Length = 351

Iteration: 1
 Score = 53.1 bits (126), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 36/110 (32%), Positives = 58/110 (52%), Gaps = 12/110 (10%)
Query: 480 YLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLA-RMHGHGQVASTTRVVGTVGYLAP 538
           YLH      +++RD+K  N+L+D++   ++ DFG A R+ G      T  + GT  YLAP
Sbjct: 157 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-----TWXLCGTPEYLAP 208
Query: 539 EVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGK 588
           E+  S   +   D +  G+LI E+ +G  P    +P     ++E +V GK
Sbjct: 209 EIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPI---QIYEKIVSGK 255

>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform Of Protein Kinase A (pka) Catalytic Subunit Calpha 2 Length = 343

Iteration: 1
 Score = 53.1 bits (126), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 36/110 (32%), Positives = 58/110 (52%), Gaps = 12/110 (10%)
Query: 480 YLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLA-RMHGHGQVASTTRVVGTVGYLAP 538
           YLH      +++RD+K  N+L+D++   ++ DFG A R+ G      T  + GT  YLAP
Sbjct: 149 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-----TWXLCGTPEYLAP 200
Query: 539 EVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGK 588
           E+  S   +   D +  G+LI E+ +G  P    +P     ++E +V GK
Sbjct: 201 EIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPI---QIYEKIVSGK 247

>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2 Length = 343

Iteration: 1
 Score = 53.1 bits (126), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 36/110 (32%), Positives = 58/110 (52%), Gaps = 12/110 (10%)
Query: 480 YLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLA-RMHGHGQVASTTRVVGTVGYLAP 538
           YLH      +++RD+K  N+L+D++   ++ DFG A R+ G      T  + GT  YLAP
Sbjct: 149 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-----TWXLCGTPEYLAP 200
Query: 539 EVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGK 588
           E+  S   +   D +  G+LI E+ +G  P    +P     ++E +V GK
Sbjct: 201 EIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPI---QIYEKIVSGK 247

>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis SerineTHREONINE Kinase, Pkne Length = 309

Iteration: 1
 Score = 53.1 bits (126), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 26/80 (32%), Positives = 42/80 (52%)
Query: 491 HRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQT 550
           HRD+K  N+L+  +    L DFG+A      ++      VGT+ Y APE FS   A+ + 
Sbjct: 157 HRDVKPENILVSADDFAYLVDFGIASATTDEKLTQLGNTVGTLYYXAPERFSESHATYRA 216
Query: 551 DVFGFGILILEVLSGRRPIE 570
           D++    ++ E L+G  P +
Sbjct: 217 DIYALTCVLYECLTGSPPYQ 236

>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit Of Camp- Dependent Protein Kinase In Complex With Sp20 And Amp-Pnp Length = 350

Iteration: 1
 Score = 53.1 bits (126), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 36/110 (32%), Positives = 58/110 (52%), Gaps = 12/110 (10%)
Query: 480 YLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLA-RMHGHGQVASTTRVVGTVGYLAP 538
           YLH      +++RD+K  N+L+D++   ++ DFG A R+ G      T  + GT  YLAP
Sbjct: 156 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-----TWXLCGTPEYLAP 207
Query: 539 EVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGK 588
           E+  S   +   D +  G+LI E+ +G  P    +P     ++E +V GK
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPI---QIYEKIVSGK 254

>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors Length = 336

Iteration: 1
 Score = 53.1 bits (126), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 36/110 (32%), Positives = 58/110 (52%), Gaps = 12/110 (10%)
Query: 480 YLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLA-RMHGHGQVASTTRVVGTVGYLAP 538
           YLH      +++RD+K  N+L+D++   ++ DFG A R+ G      T  + GT  YLAP
Sbjct: 142 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-----TWTLCGTPEYLAP 193
Query: 539 EVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGK 588
           E+  S   +   D +  G+LI E+ +G  P    +P     ++E +V GK
Sbjct: 194 EIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPI---QIYEKIVSGK 240

>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic Subunit Of Camp-Dependent Protein Kinase Complexed With A Peptide Inhibitor And Detergent Length = 350

Iteration: 1
 Score = 53.1 bits (126), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 36/110 (32%), Positives = 58/110 (52%), Gaps = 12/110 (10%)
Query: 480 YLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLA-RMHGHGQVASTTRVVGTVGYLAP 538
           YLH      +++RD+K  N+L+D++   ++ DFG A R+ G      T  + GT  YLAP
Sbjct: 156 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-----TWXLCGTPEYLAP 207
Query: 539 EVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGK 588
           E+  S   +   D +  G+LI E+ +G  P    +P     ++E +V GK
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPI---QIYEKIVSGK 254

>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy) Ethylamino)ethyl)amide Length = 351

Iteration: 1
 Score = 53.1 bits (126), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 36/110 (32%), Positives = 58/110 (52%), Gaps = 12/110 (10%)
Query: 480 YLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLA-RMHGHGQVASTTRVVGTVGYLAP 538
           YLH      +++RD+K  N+L+D++   ++ DFG A R+ G      T  + GT  YLAP
Sbjct: 157 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-----TWXLCGTPEYLAP 208
Query: 539 EVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGK 588
           E+  S   +   D +  G+LI E+ +G  P    +P     ++E +V GK
Sbjct: 209 EIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPI---QIYEKIVSGK 255

>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796 Length = 364

Iteration: 1
 Score = 53.1 bits (126), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 51/183 (27%), Positives = 84/183 (45%), Gaps = 16/183 (8%)
Query: 389 GAEIAVKRISHENDGGTRAFLA--EISSLGRLKHKSLVGLRGWCKREKG--SLMLVYDYM 444
           G  +AVK++S      T A  A  E+  L  + HK+++ L      +K       VY  M
Sbjct: 49  GINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKTLEEFQDVYLVM 108
Query: 445 E--NGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLD 502
           E  + +L + I      M L  E    +L  +  G+ +LH      ++HRD+K SN+++ 
Sbjct: 109 ELMDANLCQVI-----HMELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVK 160
Query: 503 KEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEV 562
            +   ++ DFGLAR      +   T  V T  Y APEV      +   D++  G ++ E+
Sbjct: 161 SDCTLKILDFGLARTACTNFM--MTPYVVTRYYRAPEVILGMGYAANVDIWSVGCIMGEL 218
Query: 563 LSG 565
           + G
Sbjct: 219 VKG 221

>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex Length = 334

Iteration: 1
 Score = 53.1 bits (126), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 48/189 (25%), Positives = 88/189 (46%), Gaps = 14/189 (7%)
Query: 385 LEGGGAEIAVKRISHENDGGTRAFLA-EISSLGRLKHKSLVGLRGWCKREKGSLMLVYDY 443
           L+     I  +R      G +R  +  E+S L  ++H +++ L       K  ++L+ + 
Sbjct: 37  LQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHE-VYENKTDVILILEL 95
Query: 444 MENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNV-LLD 502
           +  G L  ++ + +    L+ EE    LK +  GV YLH     ++ H D+K  N+ LLD
Sbjct: 96  VAGGELFDFLAEKES---LTEEEATEFLKQILNGVYYLHSL---QIAHFDLKPENIMLLD 149
Query: 503 KEMNG---RLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILI 559
           + +     ++ DFGLA     G       + GT  ++APE+ +      + D++  G++ 
Sbjct: 150 RNVPKPRIKIIDFGLAHKIDFGN--EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVIT 207
Query: 560 LEVLSGRRP 568
             +LSG  P
Sbjct: 208 YILLSGASP 216

>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And Regulatory (Ri{alpha}) Subunits Of Pka Length = 350

Iteration: 1
 Score = 53.1 bits (126), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 36/110 (32%), Positives = 58/110 (52%), Gaps = 12/110 (10%)
Query: 480 YLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLA-RMHGHGQVASTTRVVGTVGYLAP 538
           YLH      +++RD+K  N+L+D++   ++ DFG A R+ G      T  + GT  YLAP
Sbjct: 156 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-----TWXLAGTPEYLAP 207
Query: 539 EVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGK 588
           E+  S   +   D +  G+LI E+ +G  P    +P     ++E +V GK
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPI---QIYEKIVSGK 254

>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of Camp-Dependent Protein Kinase Length = 345

Iteration: 1
 Score = 53.1 bits (126), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 33/101 (32%), Positives = 55/101 (54%), Gaps = 9/101 (8%)
Query: 489 VLHRDIKSSNVLLDKEMNGRLGDFGLA-RMHGHGQVASTTRVVGTVGYLAPEVFSSGRAS 547
           +++RD+K  N+L+D++   ++ DFG A R+ G      T  + GT  YLAPE+  S   +
Sbjct: 157 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-----TWXLCGTPEYLAPEIILSKGYN 211
Query: 548 TQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGK 588
              D +  G+LI E+ +G  P    +P     ++E +V GK
Sbjct: 212 KAVDWWALGVLIYEMAAGYPPFFADQPI---QIYEKIVSGK 249

>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory Subunit Of Protein Kinase A That Represents The Inhibited State Length = 350

Iteration: 1
 Score = 53.1 bits (126), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 36/110 (32%), Positives = 58/110 (52%), Gaps = 12/110 (10%)
Query: 480 YLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLA-RMHGHGQVASTTRVVGTVGYLAP 538
           YLH      +++RD+K  N+L+D++   ++ DFG A R+ G      T  + GT  YLAP
Sbjct: 156 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-----TWXLCGTPEYLAP 207
Query: 539 EVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGK 588
           E+  S   +   D +  G+LI E+ +G  P    +P     ++E +V GK
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPI---QIYEKIVSGK 254

>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of Camp-Dependent Protein Kinase And Adenosine Further Defines Conformational Flexibility Length = 350

Iteration: 1
 Score = 53.1 bits (126), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 36/110 (32%), Positives = 58/110 (52%), Gaps = 12/110 (10%)
Query: 480 YLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLA-RMHGHGQVASTTRVVGTVGYLAP 538
           YLH      +++RD+K  N+L+D++   ++ DFG A R+ G      T  + GT  YLAP
Sbjct: 156 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-----TWXLCGTPEYLAP 207
Query: 539 EVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGK 588
           E+  S   +   D +  G+LI E+ +G  P    +P     ++E +V GK
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPI---QIYEKIVSGK 254

>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase Inhibitor Arc-670 Length = 351

Iteration: 1
 Score = 53.1 bits (126), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 36/110 (32%), Positives = 58/110 (52%), Gaps = 12/110 (10%)
Query: 480 YLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLA-RMHGHGQVASTTRVVGTVGYLAP 538
           YLH      +++RD+K  N+L+D++   ++ DFG A R+ G      T  + GT  YLAP
Sbjct: 157 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-----TWXLCGTPEYLAP 208
Query: 539 EVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGK 588
           E+  S   +   D +  G+LI E+ +G  P    +P     ++E +V GK
Sbjct: 209 EIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPI---QIYEKIVSGK 255

>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With Azepane Derivative 8 Length = 350

Iteration: 1
 Score = 53.1 bits (126), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 36/110 (32%), Positives = 58/110 (52%), Gaps = 12/110 (10%)
Query: 480 YLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLA-RMHGHGQVASTTRVVGTVGYLAP 538
           YLH      +++RD+K  N+L+D++   ++ DFG A R+ G      T  + GT  YLAP
Sbjct: 156 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-----TWXLCGTPEYLAP 207
Query: 539 EVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGK 588
           E+  S   +   D +  G+LI E+ +G  P    +P     ++E +V GK
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPI---QIYEKIVSGK 254

>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol Length = 351

Iteration: 1
 Score = 53.1 bits (126), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 36/110 (32%), Positives = 58/110 (52%), Gaps = 12/110 (10%)
Query: 480 YLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLA-RMHGHGQVASTTRVVGTVGYLAP 538
           YLH      +++RD+K  N+L+D++   ++ DFG A R+ G      T  + GT  YLAP
Sbjct: 157 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-----TWXLCGTPEYLAP 208
Query: 539 EVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGK 588
           E+  S   +   D +  G+LI E+ +G  P    +P     ++E +V GK
Sbjct: 209 EIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPI---QIYEKIVSGK 255

>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With A- 443654 Length = 351

Iteration: 1
 Score = 53.1 bits (126), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 36/110 (32%), Positives = 58/110 (52%), Gaps = 12/110 (10%)
Query: 480 YLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLA-RMHGHGQVASTTRVVGTVGYLAP 538
           YLH      +++RD+K  N+L+D++   ++ DFG A R+ G      T  + GT  YLAP
Sbjct: 157 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-----TWXLCGTPEYLAP 208
Query: 539 EVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGK 588
           E+  S   +   D +  G+LI E+ +G  P    +P     ++E +V GK
Sbjct: 209 EIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPI---QIYEKIVSGK 255

>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective Inhibitors In Complex With Protein Kinase A And Mutants Length = 350

Iteration: 1
 Score = 53.1 bits (126), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 36/110 (32%), Positives = 58/110 (52%), Gaps = 12/110 (10%)
Query: 480 YLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLA-RMHGHGQVASTTRVVGTVGYLAP 538
           YLH      +++RD+K  N+L+D++   ++ DFG A R+ G      T  + GT  YLAP
Sbjct: 156 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-----TWXLCGTPEYLAP 207
Query: 539 EVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGK 588
           E+  S   +   D +  G+LI E+ +G  P    +P     ++E +V GK
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPI---QIYEKIVSGK 254

>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And Potent Inhibitors For Akt: Synthesis And Sar Studies Length = 337

Iteration: 1
 Score = 53.1 bits (126), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 36/110 (32%), Positives = 58/110 (52%), Gaps = 12/110 (10%)
Query: 480 YLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLA-RMHGHGQVASTTRVVGTVGYLAP 538
           YLH      +++RD+K  N+L+D++   ++ DFG A R+ G      T  + GT  YLAP
Sbjct: 143 YLHS---LDLIYRDLKPENLLIDEQGYIQVTDFGFAKRVKGR-----TWXLCGTPEYLAP 194
Query: 539 EVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGK 588
           E+  S   +   D +  G+LI E+ +G  P    +P     ++E +V GK
Sbjct: 195 EIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPI---QIYEKIVSGK 241

>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077) Length = 350

Iteration: 1
 Score = 52.8 bits (125), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 36/110 (32%), Positives = 58/110 (52%), Gaps = 12/110 (10%)
Query: 480 YLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLA-RMHGHGQVASTTRVVGTVGYLAP 538
           YLH      +++RD+K  N+L+D++   ++ DFG A R+ G      T  + GT  YLAP
Sbjct: 156 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-----TWXLCGTPEYLAP 207
Query: 539 EVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGK 588
           E+  S   +   D +  G+LI E+ +G  P    +P     ++E +V GK
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPI---QIYEKIVSGK 254

>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With Pki-5-24 Length = 350

Iteration: 1
 Score = 52.8 bits (125), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 36/110 (32%), Positives = 58/110 (52%), Gaps = 12/110 (10%)
Query: 480 YLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLA-RMHGHGQVASTTRVVGTVGYLAP 538
           YLH      +++RD+K  N+L+D++   ++ DFG A R+ G      T  + GT  YLAP
Sbjct: 156 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-----TWXLCGTPEYLAP 207
Query: 539 EVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGK 588
           E+  S   +   D +  G+LI E+ +G  P    +P     ++E +V GK
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPI---QIYEKIVSGK 254

>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In Complex With H89 Protein Kinase Inhibitor N-[2- (4-Bromocinnamylamino)ethyl]-5-Isoquinoline Length = 350

Iteration: 1
 Score = 52.8 bits (125), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 36/110 (32%), Positives = 58/110 (52%), Gaps = 12/110 (10%)
Query: 480 YLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLA-RMHGHGQVASTTRVVGTVGYLAP 538
           YLH      +++RD+K  N+L+D++   ++ DFG A R+ G      T  + GT  YLAP
Sbjct: 156 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-----TWXLCGTPEYLAP 207
Query: 539 EVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGK 588
           E+  S   +   D +  G+LI E+ +G  P    +P     ++E +V GK
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPI---QIYEKIVSGK 254

>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In Complex With Staurosporine Length = 350

Iteration: 1
 Score = 52.8 bits (125), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 36/110 (32%), Positives = 58/110 (52%), Gaps = 12/110 (10%)
Query: 480 YLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLA-RMHGHGQVASTTRVVGTVGYLAP 538
           YLH      +++RD+K  N+L+D++   ++ DFG A R+ G      T  + GT  YLAP
Sbjct: 156 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-----TWXLCGTPEYLAP 207
Query: 539 EVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGK 588
           E+  S   +   D +  G+LI E+ +G  P    +P     ++E +V GK
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPI---QIYEKIVSGK 254

>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The Catalytic Subunit Of Camp-Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 52.8 bits (125), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 36/110 (32%), Positives = 58/110 (52%), Gaps = 12/110 (10%)
Query: 480 YLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLA-RMHGHGQVASTTRVVGTVGYLAP 538
           YLH      +++RD+K  N+L+D++   ++ DFG A R+ G      T  + GT  YLAP
Sbjct: 156 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-----TWXLCGTPEYLAP 207
Query: 539 EVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGK 588
           E+  S   +   D +  G+LI E+ +G  P    +P     ++E +V GK
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPI---QIYEKIVSGK 254

>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase Inhibitor Arc-1039 Length = 351

Iteration: 1
 Score = 52.8 bits (125), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 33/101 (32%), Positives = 55/101 (54%), Gaps = 9/101 (8%)
Query: 489 VLHRDIKSSNVLLDKEMNGRLGDFGLA-RMHGHGQVASTTRVVGTVGYLAPEVFSSGRAS 547
           +++RD+K  N+L+D++   ++ DFG A R+ G      T  + GT  YLAPE+  S   +
Sbjct: 163 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-----TWXLCGTPEYLAPEIILSKGYN 217
Query: 548 TQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGK 588
              D +  G+LI E+ +G  P    +P     ++E +V GK
Sbjct: 218 KAVDWWALGVLIYEMAAGYPPFFADQPI---QIYEKIVSGK 255

>pdb|2F7E|E Chain E, Pka Complexed With (S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6- Yl-Pyridin-3-Yloxymethyl-Etylamine Length = 351

Iteration: 1
 Score = 52.8 bits (125), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 36/110 (32%), Positives = 58/110 (52%), Gaps = 12/110 (10%)
Query: 480 YLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLA-RMHGHGQVASTTRVVGTVGYLAP 538
           YLH      +++RD+K  N+L+D++   ++ DFG A R+ G      T  + GT  YLAP
Sbjct: 157 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-----TWTLCGTPEYLAP 208
Query: 539 EVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGK 588
           E+  S   +   D +  G+LI E+ +G  P    +P     ++E +V GK
Sbjct: 209 EIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPI---QIYEKIVSGK 255

>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp- Dependent Protein Kinase Complexed With A Substrate Peptide, Adp And Detergent Length = 350

Iteration: 1
 Score = 52.8 bits (125), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 36/110 (32%), Positives = 58/110 (52%), Gaps = 12/110 (10%)
Query: 480 YLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLA-RMHGHGQVASTTRVVGTVGYLAP 538
           YLH      +++RD+K  N+L+D++   ++ DFG A R+ G      T  + GT  YLAP
Sbjct: 156 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-----TWXLCGTPEYLAP 207
Query: 539 EVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGK 588
           E+  S   +   D +  G+LI E+ +G  P    +P     ++E +V GK
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADEPI---QIYEKIVSGK 254

>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent Protein Kinase With Unphosphorylated Turn Motif Length = 371

Iteration: 1
 Score = 52.8 bits (125), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 36/110 (32%), Positives = 58/110 (52%), Gaps = 12/110 (10%)
Query: 480 YLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLA-RMHGHGQVASTTRVVGTVGYLAP 538
           YLH      +++RD+K  N+L+D++   ++ DFG A R+ G      T  + GT  YLAP
Sbjct: 177 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-----TWXLCGTPEYLAP 228
Query: 539 EVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGK 588
           E+  S   +   D +  G+LI E+ +G  P    +P     ++E +V GK
Sbjct: 229 EIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPI---QIYEKIVSGK 275

>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor Complex Length = 371

Iteration: 1
 Score = 52.8 bits (125), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 36/110 (32%), Positives = 58/110 (52%), Gaps = 12/110 (10%)
Query: 480 YLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLA-RMHGHGQVASTTRVVGTVGYLAP 538
           YLH      +++RD+K  N+L+D++   ++ DFG A R+ G      T  + GT  YLAP
Sbjct: 177 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-----TWXLCGTPEYLAP 228
Query: 539 EVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGK 588
           E+  S   +   D +  G+LI E+ +G  P    +P     ++E +V GK
Sbjct: 229 EIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPI---QIYEKIVSGK 275

>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib Length = 336

Iteration: 1
 Score = 52.8 bits (125), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 45/172 (26%), Positives = 75/172 (43%), Gaps = 24/172 (13%)
Query: 474 VAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLAR-MHGHGQVASTTRVVGT 532
           VA G+ +L     K  +HRD+ + N+LL      ++ DFGLAR +               
Sbjct: 177 VAKGMAFLAS---KNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLP 233
Query: 533 VGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKXXXX 592
           V ++APE   +   + ++DV+ +GI + E+ S       G P  V+  +  M+       
Sbjct: 234 VKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMP--VDSKFYKMI------- 284
Query: 593 XXXXXXXKGGF----DEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLEGKI 640
                  K GF     E     +  +   C   DP  RPT +Q+V+++E +I
Sbjct: 285 -------KEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQI 329

>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb Length = 350

Iteration: 1
 Score = 52.8 bits (125), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 32/101 (31%), Positives = 55/101 (54%), Gaps = 9/101 (8%)
Query: 489 VLHRDIKSSNVLLDKEMNGRLGDFGLA-RMHGHGQVASTTRVVGTVGYLAPEVFSSGRAS 547
           +++RD+K  N+++D++   ++ DFG A R+ G      T  + GT  YLAPE+  S   +
Sbjct: 162 LIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGR-----TWXLCGTPEYLAPEIILSKGYN 216
Query: 548 TQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGK 588
              D +  G+LI E+ +G  P    +P     ++E +V GK
Sbjct: 217 KAVDWWALGVLIYEMAAGYPPFFADQPI---QIYEKIVSGK 254

>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a, L173m, Q181k) With Compound 18 Length = 351

Iteration: 1
 Score = 52.8 bits (125), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 32/101 (31%), Positives = 55/101 (54%), Gaps = 9/101 (8%)
Query: 489 VLHRDIKSSNVLLDKEMNGRLGDFGLA-RMHGHGQVASTTRVVGTVGYLAPEVFSSGRAS 547
           +++RD+K  N+++D++   ++ DFG A R+ G      T  + GT  YLAPE+  S   +
Sbjct: 163 LIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGR-----TWXLCGTPEYLAPEIILSKGYN 217
Query: 548 TQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGK 588
              D +  G+LI E+ +G  P    +P     ++E +V GK
Sbjct: 218 KAVDWWALGVLIYEMAAGYPPFFADQPI---QIYEKIVSGK 255

>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein Kinase Catalytic Subunit Length = 350

Iteration: 1
 Score = 52.8 bits (125), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 36/110 (32%), Positives = 58/110 (52%), Gaps = 12/110 (10%)
Query: 480 YLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLA-RMHGHGQVASTTRVVGTVGYLAP 538
           YLH      +++RD+K  N+L+D++   ++ DFG A R+ G      T  + GT  YLAP
Sbjct: 156 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-----TWXLXGTPEYLAP 207
Query: 539 EVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGK 588
           E+  S   +   D +  G+LI E+ +G  P    +P     ++E +V GK
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPI---QIYEKIVSGK 254

>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy) Ethylamino)ethyl) Amide Length = 351

Iteration: 1
 Score = 52.8 bits (125), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 32/101 (31%), Positives = 55/101 (54%), Gaps = 9/101 (8%)
Query: 489 VLHRDIKSSNVLLDKEMNGRLGDFGLA-RMHGHGQVASTTRVVGTVGYLAPEVFSSGRAS 547
           +++RD+K  N+++D++   ++ DFG A R+ G      T  + GT  YLAPE+  S   +
Sbjct: 163 LIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGR-----TWXLCGTPEYLAPEIILSKGYN 217
Query: 548 TQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGK 588
              D +  G+LI E+ +G  P    +P     ++E +V GK
Sbjct: 218 KAVDWWALGVLIYEMAAGYPPFFADQPI---QIYEKIVSGK 255

>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein Kinase A (Pka) Length = 350

Iteration: 1
 Score = 52.8 bits (125), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 32/101 (31%), Positives = 55/101 (54%), Gaps = 9/101 (8%)
Query: 489 VLHRDIKSSNVLLDKEMNGRLGDFGLA-RMHGHGQVASTTRVVGTVGYLAPEVFSSGRAS 547
           +++RD+K  N+++D++   ++ DFG A R+ G      T  + GT  YLAPE+  S   +
Sbjct: 162 LIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGR-----TWXLCGTPEYLAPEIILSKGYN 216
Query: 548 TQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGK 588
              D +  G+LI E+ +G  P    +P     ++E +V GK
Sbjct: 217 KAVDWWALGVLIYEMAAGYPPFFADQPI---QIYEKIVSGK 254

>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor Length = 358

Iteration: 1
 Score = 52.8 bits (125), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 49/181 (27%), Positives = 84/181 (46%), Gaps = 16/181 (8%)
Query: 392 IAVKRISHENDGGTRAFLA--EISSLGRLKHKSLVGLRGWCKREKG--SLMLVYDYME-- 445
           +A+K++S      T A  A  E+  +  + HK+++GL      +K       VY  ME  
Sbjct: 46  VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM 105
Query: 446 NGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEM 505
           + +L + I      M L  E    +L  +  G+ +LH      ++HRD+K SN+++  + 
Sbjct: 106 DANLCQVI-----QMELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDC 157
Query: 506 NGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSG 565
             ++ DFGLAR  G   +   T  V T  Y APEV          D++  G ++ E++  
Sbjct: 158 TLKILDFGLARTAGTSFM--MTPYVVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCH 215
Query: 566 R 566
           +
Sbjct: 216 K 216

>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571 Inhibition Of C- Kit Tyrosine Kinase Length = 331

Iteration: 1
 Score = 52.8 bits (125), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 45/172 (26%), Positives = 75/172 (43%), Gaps = 24/172 (13%)
Query: 474 VAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLAR-MHGHGQVASTTRVVGT 532
           VA G+ +L     K  +HRD+ + N+LL      ++ DFGLAR +               
Sbjct: 172 VAKGMAFLAS---KNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLP 228
Query: 533 VGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKXXXX 592
           V ++APE   +   + ++DV+ +GI + E+ S       G P  V+  +  M+       
Sbjct: 229 VKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMP--VDSKFYKMI------- 279
Query: 593 XXXXXXXKGGF----DEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLEGKI 640
                  K GF     E     +  +   C   DP  RPT +Q+V+++E +I
Sbjct: 280 -------KEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQI 324

>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4- Chlorophenyl)-1-(7h-Pyrrolo(2, 3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine Length = 351

Iteration: 1
 Score = 52.8 bits (125), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 32/101 (31%), Positives = 55/101 (54%), Gaps = 9/101 (8%)
Query: 489 VLHRDIKSSNVLLDKEMNGRLGDFGLA-RMHGHGQVASTTRVVGTVGYLAPEVFSSGRAS 547
           +++RD+K  N+++D++   ++ DFG A R+ G      T  + GT  YLAPE+  S   +
Sbjct: 163 LIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGR-----TWXLCGTPEYLAPEIILSKGYN 217
Query: 548 TQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGK 588
              D +  G+LI E+ +G  P    +P     ++E +V GK
Sbjct: 218 KAVDWWALGVLIYEMAAGYPPFFADQPI---QIYEKIVSGK 255

>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h- Purin-6-yl)-benzyl)-amine Length = 351

Iteration: 1
 Score = 52.8 bits (125), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 32/101 (31%), Positives = 55/101 (54%), Gaps = 9/101 (8%)
Query: 489 VLHRDIKSSNVLLDKEMNGRLGDFGLA-RMHGHGQVASTTRVVGTVGYLAPEVFSSGRAS 547
           +++RD+K  N+++D++   ++ DFG A R+ G      T  + GT  YLAPE+  S   +
Sbjct: 163 LIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGR-----TWXLCGTPEYLAPEIILSKGYN 217
Query: 548 TQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGK 588
              D +  G+LI E+ +G  P    +P     ++E +V GK
Sbjct: 218 KAVDWWALGVLIYEMAAGYPPFFADQPI---QIYEKIVSGK 255

>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A Dihydroquinazolinone Inhibitor Length = 370

Iteration: 1
 Score = 52.4 bits (124), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 50/183 (27%), Positives = 87/183 (47%), Gaps = 18/183 (9%)
Query: 391 EIAVKRISH--ENDGGTRAFLAEISSLGRLKHKSLVGL----RGWCKREKGSLMLVYDYM 444
           ++AVK++S   ++    R    E+  L  LKH++++GL          E  S + +   +
Sbjct: 55  KVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTL 114
Query: 445 ENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKE 504
               L+  +     S  LS E    ++  +  G+ Y+H      ++HRD+K SNV ++++
Sbjct: 115 MGADLNNIV----KSQALSDEHVQFLVYQLLRGLKYIHSA---GIIHRDLKPSNVAVNED 167
Query: 505 MNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQT-DVFGFGILILEVL 563
              R+ DFGLAR          T  V T  Y APE+  +     QT D++  G ++ E+L
Sbjct: 168 SELRILDFGLARQADE----EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 223
Query: 564 SGR 566
            G+
Sbjct: 224 QGK 226

>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571 Inhibition Of C-kit Tyrosine Kinase Length = 313

Iteration: 1
 Score = 52.4 bits (124), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 45/172 (26%), Positives = 75/172 (43%), Gaps = 24/172 (13%)
Query: 474 VAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLAR-MHGHGQVASTTRVVGT 532
           VA G+ +L     K  +HRD+ + N+LL      ++ DFGLAR +               
Sbjct: 154 VAKGMAFLAS---KNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLP 210
Query: 533 VGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKXXXX 592
           V ++APE   +   + ++DV+ +GI + E+ S       G P  V+  +  M+       
Sbjct: 211 VKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMP--VDSKFYKMI------- 261
Query: 593 XXXXXXXKGGF----DEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLEGKI 640
                  K GF     E     +  +   C   DP  RPT +Q+V+++E +I
Sbjct: 262 -------KEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQI 306

>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex Length = 329

Iteration: 1
 Score = 52.4 bits (124), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 45/172 (26%), Positives = 75/172 (43%), Gaps = 24/172 (13%)
Query: 474 VAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLAR-MHGHGQVASTTRVVGT 532
           VA G+ +L     K  +HRD+ + N+LL      ++ DFGLAR +               
Sbjct: 170 VAKGMAFLAS---KNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLP 226
Query: 533 VGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKXXXX 592
           V ++APE   +   + ++DV+ +GI + E+ S       G P  V+  +  M+       
Sbjct: 227 VKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMP--VDSKFYKMI------- 277
Query: 593 XXXXXXXKGGF----DEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLEGKI 640
                  K GF     E     +  +   C   DP  RPT +Q+V+++E +I
Sbjct: 278 -------KEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQI 322

>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka C-Subunit:amp-Pnp:mg2+ Complex Length = 350

Iteration: 1
 Score = 52.4 bits (124), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 35/110 (31%), Positives = 58/110 (52%), Gaps = 12/110 (10%)
Query: 480 YLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLA-RMHGHGQVASTTRVVGTVGYLAP 538
           YLH      +++RD+K  N+++D++   ++ DFG A R+ G      T  + GT  YLAP
Sbjct: 156 YLHS---LDLIYRDLKPENLIIDQQGYIQVTDFGFAKRVKGR-----TWXLCGTPEYLAP 207
Query: 539 EVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGK 588
           E+  S   +   D +  G+LI E+ +G  P    +P     ++E +V GK
Sbjct: 208 EIIISKGYNKAVDWWALGVLIYEMAAGYPPFFADQPI---QIYEKIVSGK 254

>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp Length = 350

Iteration: 1
 Score = 52.4 bits (124), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 35/110 (31%), Positives = 58/110 (52%), Gaps = 12/110 (10%)
Query: 480 YLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLA-RMHGHGQVASTTRVVGTVGYLAP 538
           YLH      +++RD+K  N+++D++   ++ DFG A R+ G      T  + GT  YLAP
Sbjct: 156 YLHS---LDLIYRDLKPENLMIDQQGYIQVTDFGFAKRVKGR-----TWXLCGTPEYLAP 207
Query: 539 EVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGK 588
           E+  S   +   D +  G+LI E+ +G  P    +P     ++E +V GK
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPI---QIYEKIVSGK 254

>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2 (rsk2) Length = 342

Iteration: 1
 Score = 52.4 bits (124), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 71/258 (27%), Positives = 110/258 (42%), Gaps = 43/258 (16%)
Query: 391 EIAVKRISHENDGGTRAFLAEISSLGRL-KHKSLVGLRGWCKREKGSLMLVYDYMENGSL 449
           E AVK I    D   R    EI  L R  +H +++ L+      K  + +V + M+ G L
Sbjct: 49  EFAVKII----DKSKRDPTEEIEILLRYGQHPNIITLKDVYDDGK-YVYVVTELMKGGEL 103
Query: 450 -DKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVL-LDKEMNG 507
            DK + Q       S  E   VL  +   V YLH    + V+HRD+K SN+L +D+  N 
Sbjct: 104 LDKILRQ----KFFSEREASAVLFTITKTVEYLHA---QGVVHRDLKPSNILYVDESGNP 156
Query: 508 ---RLGDFGLAR-MHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVL 563
              R+ DFG A+ +     +  T     T  ++APEV          D++  G+L+  +L
Sbjct: 157 ESIRICDFGFAKQLRAENGLLMTP--CYTANFVAPEVLERQGYDAACDIWSLGVLLYTML 214
Query: 564 SGRRPIEEGKPNLVEMVWELMVQGKXXXXXXXXXXXKGGF-------DEDEVERVLHLGL 616
           +G  P   G  +  E +   +  GK            GG+        +D V ++LH+  
Sbjct: 215 TGYTPFANGPDDTPEEILARIGSGK--------FSLSGGYWNSVSDTAKDLVSKMLHV-- 264
Query: 617 LCAYPDPRARPTMRQVVK 634
                DP  R T   V++
Sbjct: 265 -----DPHQRLTAALVLR 277

>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl Amide Inhibitor Length = 360

Iteration: 1
 Score = 52.0 bits (123), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 49/186 (26%), Positives = 88/186 (47%), Gaps = 20/186 (10%)
Query: 389 GAEIAVKRISHENDGGTRA--FLAEISSLGRLKHKSLVGL-----RGWCKREKGSLMLVY 441
           G  +AVK++S        A     E+  L  +KH++++GL           E   + LV 
Sbjct: 47  GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 106
Query: 442 DYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLL 501
             M    L+  +        L+ +    ++  +  G+ Y+H      ++HRD+K SN+ +
Sbjct: 107 HLM-GADLNNIV----KXQKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAV 158
Query: 502 DKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQT-DVFGFGILIL 560
           +++   ++ DFGLAR H   ++   T  V T  Y APE+  +     QT D++  G ++ 
Sbjct: 159 NEDXELKILDFGLAR-HTDDEM---TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMA 214
Query: 561 EVLSGR 566
           E+L+GR
Sbjct: 215 ELLTGR 220

>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl Amide Inhibitor Length = 360

Iteration: 1
 Score = 52.0 bits (123), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 49/186 (26%), Positives = 88/186 (47%), Gaps = 20/186 (10%)
Query: 389 GAEIAVKRISHENDGGTRA--FLAEISSLGRLKHKSLVGL-----RGWCKREKGSLMLVY 441
           G  +AVK++S        A     E+  L  +KH++++GL           E   + LV 
Sbjct: 47  GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 106
Query: 442 DYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLL 501
             M    L+  +        L+ +    ++  +  G+ Y+H      ++HRD+K SN+ +
Sbjct: 107 HLM-GADLNNIV----KXQKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAV 158
Query: 502 DKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQT-DVFGFGILIL 560
           +++   ++ DFGLAR H   ++   T  V T  Y APE+  +     QT D++  G ++ 
Sbjct: 159 NEDCELKILDFGLAR-HTDDEM---TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMA 214
Query: 561 EVLSGR 566
           E+L+GR
Sbjct: 215 ELLTGR 220

>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In Complex With P38 Map Kinase Length = 360

Iteration: 1
 Score = 52.0 bits (123), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 50/186 (26%), Positives = 89/186 (47%), Gaps = 20/186 (10%)
Query: 389 GAEIAVKRISHENDGGTRA--FLAEISSLGRLKHKSLVGL-----RGWCKREKGSLMLVY 441
           G  +AVK++S        A     E+  L  +KH++++GL           E   + LV 
Sbjct: 47  GHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 106
Query: 442 DYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLL 501
             M  G+    I +C     L+ +    ++  +  G+ Y+H      ++HRD+K SN+ +
Sbjct: 107 HLM--GADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAV 158
Query: 502 DKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQT-DVFGFGILIL 560
           +++   ++ DF LAR H   ++   T  V T  Y APE+  +     QT D++  G ++ 
Sbjct: 159 NEDCELKILDFYLAR-HTDDEM---TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMA 214
Query: 561 EVLSGR 566
           E+L+GR
Sbjct: 215 ELLTGR 220

>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine Inhibitor Length = 369

Iteration: 1
 Score = 52.0 bits (123), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 49/181 (27%), Positives = 84/181 (46%), Gaps = 16/181 (8%)
Query: 392 IAVKRISHENDGGTRAFLA--EISSLGRLKHKSLVGLRGWCKREKG--SLMLVYDYME-- 445
           +A+K++S      T A  A  E+  +  + HK+++GL      +K       VY  ME  
Sbjct: 57  VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM 116
Query: 446 NGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEM 505
           + +L + I      M L  E    +L  +  G+ +LH      ++HRD+K SN+++  + 
Sbjct: 117 DANLCQVI-----QMELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDC 168
Query: 506 NGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSG 565
             ++ DFGLAR  G   +   T  V T  Y APEV          D++  G ++ E++  
Sbjct: 169 TLKILDFGLARTAGTSFM--MTPYVVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCH 226
Query: 566 R 566
           +
Sbjct: 227 K 227

>pdb|1DHK|B Chain B, Structure Of Porcine Pancreatic Alpha-Amylase Length = 223

Iteration: 1
 Score = 52.0 bits (123), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 64/264 (24%), Positives = 105/264 (39%), Gaps = 66/264 (25%)
Query: 28  FVFNGFNSSNLSLYGTATVESR-ILTLTNSTTFTIGRALYPSKIPTKRPNSSYVYPFSTS 86
           F+ + FN +NL L G ATV S   L L+ ++  ++ RA Y + I  +   +  V  F T+
Sbjct: 6   FIIDAFNKTNLILQGDATVSSNGNLQLSYNSYDSMSRAFYSAPIQIRDSTTGNVASFDTN 65
Query: 87  FIFAMAPYKGVLAGHGLVFLFVPFH-GIKGATEAQHLGLFNRTNDGNSSNHVFGVEFDVF 145
           F   +  ++   +  GL F+ VP     KG T                      VEFD F
Sbjct: 66  FTMNIRTHRQANSAVGLDFVLVPVQPESKGDT--------------------VTVEFDTF 105
Query: 146 KNQEFNDIDENHVGIDVNS--LTSVSAHAAGYWPDNQXXXXXXXXXXXXXXXEKSFKELK 203
            ++         + IDVN+  + SV      Y                            
Sbjct: 106 LSR---------ISIDVNNNDIKSVPWDVHDY---------------------------- 128
Query: 204 LNNGKNYQVWIDYADSFINITMVEAGMKRPKRPLLSVPLNLSGVLEDEMYVGFTAATGQL 263
             +G+N +V I Y  S    ++  +     K   +S  + L   + D + VGF+A +G  
Sbjct: 129 --DGQNAEVRITYNSSTKVFSVSLSNPSTGKSNNVSTTVELEKEVYDWVSVGFSATSGAY 186
Query: 264 ---VESHKILAWSFSNTKFSLSEE 284
               E+H +L+WSFS+   +L ++
Sbjct: 187 QWSYETHDVLSWSFSSKFINLKDQ 210

>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1 Reveals A Novel Autoinhibitory Conformation For A Dual Kinase Protein Length = 355

Iteration: 1
 Score = 52.0 bits (123), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 38/135 (28%), Positives = 64/135 (47%), Gaps = 8/135 (5%)
Query: 436 SLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIK 495
            L L+ DY+  G L   + Q +       E  +++   V   VL L    +  +++RDIK
Sbjct: 133 KLHLILDYINGGELFTHLSQRERF----TEHEVQIY--VGEIVLALEHLHKLGIIYRDIK 186
Query: 496 SSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRA--STQTDVF 553
             N+LLD   +  L DFGL++     +        GT+ Y+AP++   G +      D +
Sbjct: 187 LENILLDSNGHVVLTDFGLSKEFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWW 246
Query: 554 GFGILILEVLSGRRP 568
             G+L+ E+L+G  P
Sbjct: 247 SLGVLMYELLTGASP 261

>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent Protein Kinase Reveals Unexpected Apoenzyme Conformation Length = 350

Iteration: 1
 Score = 52.0 bits (123), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 35/110 (31%), Positives = 58/110 (52%), Gaps = 12/110 (10%)
Query: 480 YLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLA-RMHGHGQVASTTRVVGTVGYLAP 538
           YLH      +++RD+K  N+L+D++   ++ DFG A R+ G      T  + GT  YLAP
Sbjct: 156 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-----TWXLCGTPEYLAP 207
Query: 539 EVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGK 588
           E+  S   +   D +  G+LI ++ +G  P    +P     ++E +V GK
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYQMAAGYPPFFADQPI---QIYEKIVSGK 254

>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360

Iteration: 1
 Score = 51.6 bits (122), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 50/186 (26%), Positives = 89/186 (47%), Gaps = 20/186 (10%)
Query: 389 GAEIAVKRISHENDGGTRA--FLAEISSLGRLKHKSLVGL-----RGWCKREKGSLMLVY 441
           G  +AVK++S        A     E+  L  +KH++++GL           E   + LV 
Sbjct: 47  GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 106
Query: 442 DYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLL 501
             M  G+    I +C     L+ +    ++  +  G+ Y+H      ++HRD+K SN+ +
Sbjct: 107 HLM--GADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAV 158
Query: 502 DKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQT-DVFGFGILIL 560
           +++   ++ D GLAR H   ++   T  V T  Y APE+  +     QT D++  G ++ 
Sbjct: 159 NEDCELKILDAGLAR-HTDDEM---TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMA 214
Query: 561 EVLSGR 566
           E+L+GR
Sbjct: 215 ELLTGR 220

>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580 Length = 360

Iteration: 1
 Score = 51.6 bits (122), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 49/186 (26%), Positives = 88/186 (47%), Gaps = 20/186 (10%)
Query: 389 GAEIAVKRISHENDGGTRA--FLAEISSLGRLKHKSLVGL-----RGWCKREKGSLMLVY 441
           G  +AVK++S        A     E+  L  +KH++++GL           E   + LV 
Sbjct: 47  GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 106
Query: 442 DYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLL 501
             M    L+  +     S  L+ +    ++  +  G+ Y+H      ++HRD+K SN+ +
Sbjct: 107 HLM-GADLNNIV----KSQKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAV 158
Query: 502 DKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQT-DVFGFGILIL 560
           +++   ++ DFGL R H   ++   T  V T  Y APE+  +     QT D++  G ++ 
Sbjct: 159 NEDSELKILDFGLCR-HTDDEM---TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMA 214
Query: 561 EVLSGR 566
           E+L+GR
Sbjct: 215 ELLTGR 220

>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif Mutants In Response To Inhibitor Binding Length = 360

Iteration: 1
 Score = 51.6 bits (122), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 50/186 (26%), Positives = 89/186 (47%), Gaps = 20/186 (10%)
Query: 389 GAEIAVKRISHENDGGTRA--FLAEISSLGRLKHKSLVGL-----RGWCKREKGSLMLVY 441
           G  +AVK++S        A     E+  L  +KH++++GL           E   + LV 
Sbjct: 47  GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 106
Query: 442 DYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLL 501
             M  G+    I +C     L+ +    ++  +  G+ Y+H      ++HRD+K SN+ +
Sbjct: 107 HLM--GADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAV 158
Query: 502 DKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQT-DVFGFGILIL 560
           +++   ++  FGLAR H   ++   T  V T  Y APE+  +     QT D++  G ++ 
Sbjct: 159 NEDCELKILGFGLAR-HTDDEM---TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMA 214
Query: 561 EVLSGR 566
           E+L+GR
Sbjct: 215 ELLTGR 220

>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Length = 370

Iteration: 1
 Score = 51.6 bits (122), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 48/181 (26%), Positives = 83/181 (45%), Gaps = 16/181 (8%)
Query: 392 IAVKRISHENDGGTRAFLA--EISSLGRLKHKSLVGLRGWCKREKG--SLMLVYDYME-- 445
           +A+K++S      T A  A  E+  +  + HK+++GL      +K       VY  ME  
Sbjct: 52  VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM 111
Query: 446 NGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEM 505
           + +L + I      M L  E    +L  +  G+ +LH      ++HRD+K SN+++  + 
Sbjct: 112 DANLCQVI-----QMELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDC 163
Query: 506 NGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSG 565
             ++ DFGLAR  G   +      V T  Y APEV          D++  G ++ E++  
Sbjct: 164 TLKILDFGLARTAGTSFMMEPE--VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVCH 221
Query: 566 R 566
           +
Sbjct: 222 K 222

>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360

Iteration: 1
 Score = 51.6 bits (122), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 50/186 (26%), Positives = 89/186 (47%), Gaps = 20/186 (10%)
Query: 389 GAEIAVKRISHENDGGTRA--FLAEISSLGRLKHKSLVGL-----RGWCKREKGSLMLVY 441
           G  +AVK++S        A     E+  L  +KH++++GL           E   + LV 
Sbjct: 47  GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 106
Query: 442 DYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLL 501
             M  G+    I +C     L+ +    ++  +  G+ Y+H      ++HRD+K SN+ +
Sbjct: 107 HLM--GADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAV 158
Query: 502 DKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQT-DVFGFGILIL 560
           +++   ++ D GLAR H   ++   T  V T  Y APE+  +     QT D++  G ++ 
Sbjct: 159 NEDCELKILDRGLAR-HTDDEM---TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMA 214
Query: 561 EVLSGR 566
           E+L+GR
Sbjct: 215 ELLTGR 220

>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6 Length = 362

Iteration: 1
 Score = 51.6 bits (122), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 51/165 (30%), Positives = 74/165 (44%), Gaps = 14/165 (8%)
Query: 411 EISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRV 470
           EI +   L+H ++V  +         L +V +Y   G L + I  C+       E R   
Sbjct: 65  EIINHRSLRHPNIVRFKEVI-LTPTHLAIVMEYASGGELFERI--CNAGRFSEDEARF-F 120
Query: 471 LKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRL--GDFGLARMHG-HGQVASTT 527
            + + +GV Y H     +V HRD+K  N LLD     RL   DFG ++    H Q  ST 
Sbjct: 121 FQQLISGVSYCHA---MQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKST- 176
Query: 528 RVVGTVGYLAPEVFSSGRASTQ-TDVFGFGILILEVLSGRRPIEE 571
             VGT  Y+APEV        +  DV+  G+ +  +L G  P E+
Sbjct: 177 --VGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFED 219

>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1 Length = 361

Iteration: 1
 Score = 51.2 bits (121), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 51/165 (30%), Positives = 74/165 (44%), Gaps = 14/165 (8%)
Query: 411 EISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRV 470
           EI +   L+H ++V  +         L +V +Y   G L + I  C+       E R   
Sbjct: 64  EIINHRSLRHPNIVRFKEVI-LTPTHLAIVMEYASGGELFERI--CNAGRFSEDEARF-F 119
Query: 471 LKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRL--GDFGLARMHG-HGQVASTT 527
            + + +GV Y H     +V HRD+K  N LLD     RL   DFG ++    H Q  ST 
Sbjct: 120 FQQLISGVSYCHA---MQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKST- 175
Query: 528 RVVGTVGYLAPEVFSSGRASTQ-TDVFGFGILILEVLSGRRPIEE 571
             VGT  Y+APEV        +  DV+  G+ +  +L G  P E+
Sbjct: 176 --VGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFED 218

>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine Kinase Length = 277

Iteration: 1
 Score = 51.2 bits (121), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 49/188 (26%), Positives = 86/188 (45%), Gaps = 15/188 (7%)
Query: 386 EGGGAEIAVKRISHEND-GGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLML-VYDY 443
           +G    +AVK    +        F++E   +  L H  +V L G  + E   +++ +Y Y
Sbjct: 33  KGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEEEPTWIIMELYPY 92
Query: 444 MENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDK 503
              G L  ++ +   S  L     +     +   + YL        +HRDI   N+L+  
Sbjct: 93  ---GELGHYLERNKNS--LKVLTLVLYSLQICKAMAYLES---INCVHRDIAVRNILVAS 144
Query: 504 EMNGRLGDFGLARMHGHGQV--ASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILE 561
               +LGDFGL+R         AS TR+   + +++PE  +  R +T +DV+ F + + E
Sbjct: 145 PECVKLGDFGLSRYIEDEDYYKASVTRL--PIKWMSPESINFRRFTTASDVWMFAVCMWE 202
Query: 562 VLS-GRRP 568
           +LS G++P
Sbjct: 203 ILSFGKQP 210

>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein Kinase Kinase 7 Activated Mutant (S287d, T291d) Length = 318

Iteration: 1
 Score = 51.2 bits (121), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 44/180 (24%), Positives = 80/180 (44%), Gaps = 41/180 (22%)
Query: 431 KREKGSLMLVYDYMENGSLDKWIFQCDGS------------MMLSCEERI---------- 468
           K E   +++  D +       +I QC G+            +M +C E++          
Sbjct: 64  KEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAMELMGTCAEKLKKRMQGPIPE 123
Query: 469 RVLKDVAAGVL----YLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVA 524
           R+L  +   ++    YL E  +  V+HRD+K SN+LLD+    +L DFG++     G++ 
Sbjct: 124 RILGKMTVAIVKALYYLKE--KHGVIHRDVKPSNILLDERGQIKLCDFGIS-----GRLV 176
Query: 525 ---STTRVVGTVGYLAPEVFSSGRAST-----QTDVFGFGILILEVLSGRRPIEEGKPNL 576
              +  R  G   Y+APE       +      + DV+  GI ++E+ +G+ P +  K + 
Sbjct: 177 DDKAKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDF 236

>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2: Se-Met Derivative Length = 342

Iteration: 1
 Score = 51.2 bits (121), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 59/206 (28%), Positives = 89/206 (43%), Gaps = 23/206 (11%)
Query: 391 EIAVKRISHENDGGTRAFLAEISSLGRL-KHKSLVGLRGWCKREKGSLMLVYDYMENGS- 448
           E AVK I    D   R    EI  L R  +H +++ L+     + G  + V   +  G  
Sbjct: 49  EFAVKII----DKSKRDPTEEIEILLRYGQHPNIITLKD--VYDDGKYVYVVTELXKGGE 102
Query: 449 -LDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVL-LDKEMN 506
            LDK + Q       S  E   VL  +   V YLH    + V+HRD+K SN+L +D+  N
Sbjct: 103 LLDKILRQ----KFFSEREASAVLFTITKTVEYLHA---QGVVHRDLKPSNILYVDESGN 155
Query: 507 G---RLGDFGLAR-MHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEV 562
               R+ DFG A+ +     +  T     T  ++APEV          D++  G+L+   
Sbjct: 156 PESIRICDFGFAKQLRAENGLLXTP--CYTANFVAPEVLERQGYDAACDIWSLGVLLYTX 213
Query: 563 LSGRRPIEEGKPNLVEMVWELMVQGK 588
           L+G  P   G  +  E +   +  GK
Sbjct: 214 LTGYTPFANGPDDTPEEILARIGSGK 239

>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a Length = 293

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 49/188 (26%), Positives = 86/188 (45%), Gaps = 15/188 (7%)
Query: 386 EGGGAEIAVKRISHEND-GGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLML-VYDY 443
           +G    +AVK    +        F++E   +  L H  +V L G  + E   +++ +Y Y
Sbjct: 49  KGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEEEPTWIIMELYPY 108
Query: 444 MENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDK 503
              G L  ++ +   S  L     +     +   + YL        +HRDI   N+L+  
Sbjct: 109 ---GELGHYLERNKNS--LKVLTLVLYSLQICKAMAYLES---INCVHRDIAVRNILVAS 160
Query: 504 EMNGRLGDFGLARMHGHGQV--ASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILE 561
               +LGDFGL+R         AS TR+   + +++PE  +  R +T +DV+ F + + E
Sbjct: 161 PECVKLGDFGLSRYIEDEDYYKASVTRL--PIKWMSPESINFRRFTTASDVWMFAVCMWE 218
Query: 562 VLS-GRRP 568
           +LS G++P
Sbjct: 219 ILSFGKQP 226

>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 50/186 (26%), Positives = 89/186 (47%), Gaps = 20/186 (10%)
Query: 389 GAEIAVKRISHENDGGTRA--FLAEISSLGRLKHKSLVGL-----RGWCKREKGSLMLVY 441
           G  +AVK++S        A     E+  L  +KH++++GL           E   + LV 
Sbjct: 47  GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 106
Query: 442 DYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLL 501
             M  G+    I +C     L+ +    ++  +  G+ Y+H      ++HRD+K SN+ +
Sbjct: 107 HLM--GADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAV 158
Query: 502 DKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQT-DVFGFGILIL 560
           +++   ++ D GLAR H   ++   T  V T  Y APE+  +     QT D++  G ++ 
Sbjct: 159 NEDCELKILDGGLAR-HTDDEM---TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMA 214
Query: 561 EVLSGR 566
           E+L+GR
Sbjct: 215 ELLTGR 220

>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774 Length = 355

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 48/181 (26%), Positives = 83/181 (45%), Gaps = 16/181 (8%)
Query: 392 IAVKRISHENDGGTRAFLA--EISSLGRLKHKSLVGLRGWCKREKG--SLMLVYDYME-- 445
           +A+K++S      T A  A  E+  +  + HK+++ L      +K       VY  ME  
Sbjct: 52  VAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM 111
Query: 446 NGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEM 505
           + +L + I      M L  E    +L  +  G+ +LH      ++HRD+K SN+++  + 
Sbjct: 112 DANLXQVI-----QMELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDX 163
Query: 506 NGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSG 565
             ++ DFGLAR  G   +   T  V T  Y APEV          D++  G ++ E++  
Sbjct: 164 TLKILDFGLARTAGTSFM--MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRH 221
Query: 566 R 566
           +
Sbjct: 222 K 222

>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors Length = 370

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 48/181 (26%), Positives = 83/181 (45%), Gaps = 16/181 (8%)
Query: 392 IAVKRISHENDGGTRAFLA--EISSLGRLKHKSLVGLRGWCKREKG--SLMLVYDYME-- 445
           +A+K++S      T A  A  E+  +  + HK+++GL      +K       VY  ME  
Sbjct: 52  VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM 111
Query: 446 NGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEM 505
           + +L + I      M L  E    +L  +  G+ +LH      ++HRD+K SN+++  + 
Sbjct: 112 DANLCQVI-----QMELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDC 163
Query: 506 NGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSG 565
             ++ DFGLAR  G   +      V T  Y APEV          D++  G ++ E++  
Sbjct: 164 TLKILDFGLARTAGTSFMMEPE--VVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCH 221
Query: 566 R 566
           +
Sbjct: 222 K 222

>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain Length = 332

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 29/107 (27%), Positives = 49/107 (45%), Gaps = 14/107 (13%)
Query: 468 IRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTT 527
           + +   +A  V +LH    K ++HRD+K SN+    +   ++GDFGL       +   T 
Sbjct: 167 LHIFIQIAEAVEFLHS---KGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTV 223
Query: 528 RV-----------VGTVGYLAPEVFSSGRASTQTDVFGFGILILEVL 563
                        VGT  Y++PE       S + D+F  G+++ E+L
Sbjct: 224 LTPMPAYATHXGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELL 270

>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine Kinase 2 Beta (ptk2b) Length = 281

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 49/188 (26%), Positives = 86/188 (45%), Gaps = 15/188 (7%)
Query: 386 EGGGAEIAVKRISHEND-GGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLML-VYDY 443
           +G    +AVK    +        F++E   +  L H  +V L G  + E   +++ +Y Y
Sbjct: 37  KGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEEEPTWIIMELYPY 96
Query: 444 MENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDK 503
              G L  ++ +   S  L     +     +   + YL        +HRDI   N+L+  
Sbjct: 97  ---GELGHYLERNKNS--LKVLTLVLYSLQICKAMAYLES---INCVHRDIAVRNILVAS 148
Query: 504 EMNGRLGDFGLARMHGHGQV--ASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILE 561
               +LGDFGL+R         AS TR+   + +++PE  +  R +T +DV+ F + + E
Sbjct: 149 PECVKLGDFGLSRYIEDEDYYKASVTRL--PIKWMSPESINFRRFTTASDVWMFAVCMWE 206
Query: 562 VLS-GRRP 568
           +LS G++P
Sbjct: 207 ILSFGKQP 214

>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737 Length = 364

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 48/181 (26%), Positives = 83/181 (45%), Gaps = 16/181 (8%)
Query: 392 IAVKRISHENDGGTRAFLA--EISSLGRLKHKSLVGLRGWCKREKG--SLMLVYDYME-- 445
           +A+K++S      T A  A  E+  +  + HK+++ L      +K       VY  ME  
Sbjct: 52  VAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM 111
Query: 446 NGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEM 505
           + +L + I      M L  E    +L  +  G+ +LH      ++HRD+K SN+++  + 
Sbjct: 112 DANLXQVI-----QMELDHERMSYLLYQMLXGIKHLHSA---GIIHRDLKPSNIVVKSDX 163
Query: 506 NGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSG 565
             ++ DFGLAR  G   +   T  V T  Y APEV          D++  G ++ E++  
Sbjct: 164 TLKILDFGLARTAGTSFM--MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRH 221
Query: 566 R 566
           +
Sbjct: 222 K 222

>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit Of Camp- Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 50.8 bits (120), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 35/110 (31%), Positives = 57/110 (51%), Gaps = 12/110 (10%)
Query: 480 YLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLA-RMHGHGQVASTTRVVGTVGYLAP 538
           YLH      +++RD+K  N+L+D++   ++ DFG A R+ G      T  + GT  YLAP
Sbjct: 156 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-----TWXLCGTPEYLAP 207
Query: 539 EVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGK 588
            +  S   +   D +  G+LI E+ +G  P    +P     ++E +V GK
Sbjct: 208 AIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPI---QIYEKIVSGK 254

>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex Length = 269

Iteration: 1
 Score = 50.4 bits (119), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 51/201 (25%), Positives = 83/201 (41%), Gaps = 28/201 (13%)
Query: 387 GGGAEIAVKRISHENDG--------GTRAFLA--------EISSLGRLKHKSLVGLRGWC 430
           G GA   V+R  H+  G         T+   A        E     +L+H ++V L    
Sbjct: 15  GKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHD-S 73
Query: 431 KREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVL 490
            +E+    LV+D +  G L + I         S  +    ++ +   + Y H      ++
Sbjct: 74  IQEESFHYLVFDLVTGGELFEDIV---AREFYSEADASHCIQQILESIAYCHSN---GIV 127
Query: 491 HRDIKSSNVLLDKEMNG---RLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRAS 547
           HR++K  N+LL  +  G   +L DFGLA      +        GT GYL+PEV      S
Sbjct: 128 HRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHG--FAGTPGYLSPEVLKKDPYS 185
Query: 548 TQTDVFGFGILILEVLSGRRP 568
              D++  G+++  +L G  P
Sbjct: 186 KPVDIWACGVILYILLVGYPP 206

>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76 Length = 324

Iteration: 1
 Score = 50.4 bits (119), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 39/139 (28%), Positives = 63/139 (45%), Gaps = 11/139 (7%)
Query: 434 KGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRD 493
           +  L++V + ++ G L   I Q  G    +  E   ++K +   + YLH      + HRD
Sbjct: 91  RKCLLIVMECLDGGELFSRI-QDRGDQAFTEREASEIMKSIGEAIQYLHSI---NIAHRD 146
Query: 494 IKSSNVLL-DKEMNG--RLGDFGLAR-MHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQ 549
           +K  N+L   K  N   +L DFG A+    H    S T    T  Y+APEV    +    
Sbjct: 147 VKPENLLYTSKRPNAILKLTDFGFAKETTSHN---SLTTPCYTPYYVAPEVLGPEKYDKS 203
Query: 550 TDVFGFGILILEVLSGRRP 568
            D++  G+++  +L G  P
Sbjct: 204 CDMWSLGVIMYILLCGYPP 222

>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With Mgamp-Pnp Length = 423

Iteration: 1
 Score = 50.4 bits (119), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 48/181 (26%), Positives = 83/181 (45%), Gaps = 16/181 (8%)
Query: 392 IAVKRISHENDGGTRAFLA--EISSLGRLKHKSLVGLRGWCKREKG--SLMLVYDYME-- 445
           +A+K++S      T A  A  E+  +  + HK+++ L      +K       VY  ME  
Sbjct: 90  VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM 149
Query: 446 NGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEM 505
           + +L + I      M L  E    +L  +  G+ +LH      ++HRD+K SN+++  + 
Sbjct: 150 DANLCQVI-----QMELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDC 201
Query: 506 NGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSG 565
             ++ DFGLAR  G   +   T  V T  Y APEV          D++  G ++ E++  
Sbjct: 202 TLKILDFGLARTAGTSFM--MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRH 259
Query: 566 R 566
           +
Sbjct: 260 K 260

>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor 6-(5-(2-Aminopyrimidin-4-Ylamino)-2- Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide Length = 320

Iteration: 1
 Score = 50.4 bits (119), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 39/139 (28%), Positives = 63/139 (45%), Gaps = 11/139 (7%)
Query: 434 KGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRD 493
           +  L++V + ++ G L   I Q  G    +  E   ++K +   + YLH      + HRD
Sbjct: 85  RKCLLIVMECLDGGELFSRI-QDRGDQAFTEREASEIMKSIGEAIQYLHSI---NIAHRD 140
Query: 494 IKSSNVLL-DKEMNG--RLGDFGLAR-MHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQ 549
           +K  N+L   K  N   +L DFG A+    H    S T    T  Y+APEV    +    
Sbjct: 141 VKPENLLYTSKRPNAILKLTDFGFAKETTSHN---SLTEPCYTPYYVAPEVLGPEKYDKS 197
Query: 550 TDVFGFGILILEVLSGRRP 568
            D++  G+++  +L G  P
Sbjct: 198 CDMWSLGVIMYILLCGYPP 216

>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide Length = 356

Iteration: 1
 Score = 50.4 bits (119), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 48/181 (26%), Positives = 83/181 (45%), Gaps = 16/181 (8%)
Query: 392 IAVKRISHENDGGTRAFLA--EISSLGRLKHKSLVGLRGWCKREKG--SLMLVYDYME-- 445
           +A+K++S      T A  A  E+  +  + HK+++ L      +K       VY  ME  
Sbjct: 46  VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM 105
Query: 446 NGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEM 505
           + +L + I      M L  E    +L  +  G+ +LH      ++HRD+K SN+++  + 
Sbjct: 106 DANLCQVI-----QMELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDC 157
Query: 506 NGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSG 565
             ++ DFGLAR  G   +   T  V T  Y APEV          D++  G ++ E++  
Sbjct: 158 TLKILDFGLARTAGTSFM--MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRH 215
Query: 566 R 566
           +
Sbjct: 216 K 216

>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3 Length = 355

Iteration: 1
 Score = 50.4 bits (119), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 48/181 (26%), Positives = 83/181 (45%), Gaps = 16/181 (8%)
Query: 392 IAVKRISHENDGGTRAFLA--EISSLGRLKHKSLVGLRGWCKREKG--SLMLVYDYME-- 445
           +A+K++S      T A  A  E+  +  + HK+++ L      +K       VY  ME  
Sbjct: 45  VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM 104
Query: 446 NGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEM 505
           + +L + I      M L  E    +L  +  G+ +LH      ++HRD+K SN+++  + 
Sbjct: 105 DANLCQVI-----QMELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDC 156
Query: 506 NGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSG 565
             ++ DFGLAR  G   +   T  V T  Y APEV          D++  G ++ E++  
Sbjct: 157 TLKILDFGLARTAGTSFM--MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRH 214
Query: 566 R 566
           +
Sbjct: 215 K 215

>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap Kinase-2 Length = 325

Iteration: 1
 Score = 50.4 bits (119), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 39/139 (28%), Positives = 63/139 (45%), Gaps = 11/139 (7%)
Query: 434 KGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRD 493
           +  L++V + ++ G L   I Q  G    +  E   ++K +   + YLH      + HRD
Sbjct: 92  RKCLLIVMECLDGGELFSRI-QDRGDQAFTEREASEIMKSIGEAIQYLHSI---NIAHRD 147
Query: 494 IKSSNVLL-DKEMNG--RLGDFGLAR-MHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQ 549
           +K  N+L   K  N   +L DFG A+    H    S T    T  Y+APEV    +    
Sbjct: 148 VKPENLLYTSKRPNAILKLTDFGFAKETTSHN---SLTTPCYTPYYVAPEVLGPEKYDKS 204
Query: 550 TDVFGFGILILEVLSGRRP 568
            D++  G+++  +L G  P
Sbjct: 205 CDMWSLGVIMYILLCGYPP 223

>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And Thiazole Based Inhibitors Of Jnk For The Treatment Of Neurodegenerative Diseases Length = 362

Iteration: 1
 Score = 50.4 bits (119), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 48/181 (26%), Positives = 83/181 (45%), Gaps = 16/181 (8%)
Query: 392 IAVKRISHENDGGTRAFLA--EISSLGRLKHKSLVGLRGWCKREKG--SLMLVYDYME-- 445
           +A+K++S      T A  A  E+  +  + HK+++ L      +K       VY  ME  
Sbjct: 51  VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM 110
Query: 446 NGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEM 505
           + +L + I      M L  E    +L  +  G+ +LH      ++HRD+K SN+++  + 
Sbjct: 111 DANLCQVI-----QMELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDC 162
Query: 506 NGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSG 565
             ++ DFGLAR  G   +   T  V T  Y APEV          D++  G ++ E++  
Sbjct: 163 TLKILDFGLARTAGTSFM--MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRH 220
Query: 566 R 566
           +
Sbjct: 221 K 221

>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious Tri-Substituted Thiophene Based Jnk Inhibitor Length = 363

Iteration: 1
 Score = 50.4 bits (119), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 48/181 (26%), Positives = 83/181 (45%), Gaps = 16/181 (8%)
Query: 392 IAVKRISHENDGGTRAFLA--EISSLGRLKHKSLVGLRGWCKREKG--SLMLVYDYME-- 445
           +A+K++S      T A  A  E+  +  + HK+++ L      +K       VY  ME  
Sbjct: 52  VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM 111
Query: 446 NGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEM 505
           + +L + I      M L  E    +L  +  G+ +LH      ++HRD+K SN+++  + 
Sbjct: 112 DANLCQVI-----QMELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDC 163
Query: 506 NGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSG 565
             ++ DFGLAR  G   +   T  V T  Y APEV          D++  G ++ E++  
Sbjct: 164 TLKILDFGLARTAGTSFM--MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRH 221
Query: 566 R 566
           +
Sbjct: 222 K 222

>pdb|1VIW|B Chain B, Tenebrio Molitor Alpha-Amylase-Inhibitor Complex Length = 205

Iteration: 1
 Score = 50.4 bits (119), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 65/259 (25%), Positives = 103/259 (39%), Gaps = 67/259 (25%)
Query: 28  FVFNGFNSSNLSLYGTATVESR-ILTLTNSTTFTIGRALYPSKIPTKRPNSSYVYPFSTS 86
           F+ + FN +NL L G ATV S   L L+ ++  ++ RA Y + I  +   +  V  F T+
Sbjct: 6   FIIDAFNKTNLILQGDATVSSNGNLQLSYNSYDSMSRAFYSAPIQIRDSTTGNVASFDTN 65
Query: 87  FIFAMAPYKGVLAGHGLVFLFVPFH-GIKGATEAQHLGLFNRTNDGNSSNHVFGVEFDVF 145
           F   +  ++   +  GL F+ VP     KG T                      VEFD F
Sbjct: 66  FTMNIRTHRQANSAVGLDFVLVPVQPESKGDT--------------------VTVEFDTF 105
Query: 146 KNQEFNDIDENHVGIDVNS--LTSVSAHAAGYWPDNQXXXXXXXXXXXXXXXEKSFKELK 203
            ++         + IDVN+  + SV      Y                            
Sbjct: 106 LSR---------ISIDVNNNDIKSVPWDVHDY---------------------------- 128
Query: 204 LNNGKNYQVWIDYADSFINITMVEAGMKRPKRPLLSVPLNLSGVLEDEMYVGFTAATGQL 263
             +G+N +V I Y  S    ++  +     K   +S  + L   + D + VGF+A +G  
Sbjct: 129 --DGQNAEVRITYNSSTKVFSVSLSNPSTGKSNNVSTTVELEKEVYDWVSVGFSATSGAY 186
Query: 264 ---VESHKILAWSFSNTKF 279
               E+H +L+WSFS +KF
Sbjct: 187 QWSYETHDVLSWSFS-SKF 204

>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3 Length = 361

Iteration: 1
 Score = 50.4 bits (119), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 44/139 (31%), Positives = 64/139 (46%), Gaps = 13/139 (9%)
Query: 437 LMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKS 496
           L ++ +Y   G L + I  C+       E R    + + +GV Y H     ++ HRD+K 
Sbjct: 91  LAIIMEYASGGELYERI--CNAGRFSEDEARF-FFQQLLSGVSYCHS---MQICHRDLKL 144
Query: 497 SNVLLDKEMNGRL--GDFGLARMHG-HGQVASTTRVVGTVGYLAPEVFSSGRASTQ-TDV 552
            N LLD     RL   DFG ++    H Q  ST   VGT  Y+APEV        +  DV
Sbjct: 145 ENTLLDGSPAPRLKICDFGYSKSSVLHSQPKST---VGTPAYIAPEVLLRQEYDGKIADV 201
Query: 553 FGFGILILEVLSGRRPIEE 571
           +  G+ +  +L G  P E+
Sbjct: 202 WSCGVTLYVMLVGAYPFED 220

>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal Form-1, Soaking) Length = 326

Iteration: 1
 Score = 50.1 bits (118), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 39/139 (28%), Positives = 63/139 (45%), Gaps = 11/139 (7%)
Query: 434 KGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRD 493
           +  L++V + ++ G L   I Q  G    +  E   ++K +   + YLH      + HRD
Sbjct: 93  RKCLLIVMECLDGGELFSRI-QDRGDQAFTEREASEIMKSIGEAIQYLHS---INIAHRD 148
Query: 494 IKSSNVLL-DKEMNG--RLGDFGLAR-MHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQ 549
           +K  N+L   K  N   +L DFG A+    H    S T    T  Y+APEV    +    
Sbjct: 149 VKPENLLYTSKRPNAILKLTDFGFAKETTSHN---SLTTPCYTPYYVAPEVLGPEKYDKS 205
Query: 550 TDVFGFGILILEVLSGRRP 568
            D++  G+++  +L G  P
Sbjct: 206 CDMWSLGVIMYILLCGYPP 224

>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3 Length = 356

Iteration: 1
 Score = 50.1 bits (118), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 48/181 (26%), Positives = 83/181 (45%), Gaps = 16/181 (8%)
Query: 392 IAVKRISHENDGGTRAFLA--EISSLGRLKHKSLVGLRGWCKREKG--SLMLVYDYME-- 445
           +A+K++S      T A  A  E+  +  + HK+++ L      +K       VY  ME  
Sbjct: 46  VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM 105
Query: 446 NGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEM 505
           + +L + I      M L  E    +L  +  G+ +LH      ++HRD+K SN+++  + 
Sbjct: 106 DANLCQVI-----QMELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDC 157
Query: 506 NGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSG 565
             ++ DFGLAR  G   +   T  V T  Y APEV          D++  G ++ E++  
Sbjct: 158 TLKILDFGLARTAGTSFM--MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRH 215
Query: 566 R 566
           +
Sbjct: 216 K 216

>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline Inhibitor Length = 356

Iteration: 1
 Score = 50.1 bits (118), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 48/181 (26%), Positives = 83/181 (45%), Gaps = 16/181 (8%)
Query: 392 IAVKRISHENDGGTRAFLA--EISSLGRLKHKSLVGLRGWCKREKG--SLMLVYDYME-- 445
           +A+K++S      T A  A  E+  +  + HK+++ L      +K       VY  ME  
Sbjct: 45  VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM 104
Query: 446 NGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEM 505
           + +L + I      M L  E    +L  +  G+ +LH      ++HRD+K SN+++  + 
Sbjct: 105 DANLXQVI-----QMELDHERMSYLLYQMLXGIKHLHSA---GIIHRDLKPSNIVVKSDX 156
Query: 506 NGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSG 565
             ++ DFGLAR  G   +   T  V T  Y APEV          D++  G ++ E++  
Sbjct: 157 TLKILDFGLARTAGTSFM--MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRH 214
Query: 566 R 566
           +
Sbjct: 215 K 215

>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With N-{3-Cyano-6-[3-(1- Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2, 3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide Length = 364

Iteration: 1
 Score = 50.1 bits (118), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 48/181 (26%), Positives = 83/181 (45%), Gaps = 16/181 (8%)
Query: 392 IAVKRISHENDGGTRAFLA--EISSLGRLKHKSLVGLRGWCKREKG--SLMLVYDYME-- 445
           +A+K++S      T A  A  E+  +  + HK+++ L      +K       VY  ME  
Sbjct: 52  VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM 111
Query: 446 NGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEM 505
           + +L + I      M L  E    +L  +  G+ +LH      ++HRD+K SN+++  + 
Sbjct: 112 DANLCQVI-----QMELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDC 163
Query: 506 NGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSG 565
             ++ DFGLAR  G   +   T  V T  Y APEV          D++  G ++ E++  
Sbjct: 164 TLKILDFGLARTAGTSFM--MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRH 221
Query: 566 R 566
           +
Sbjct: 222 K 222

>pdb|3KK9|A Chain A, Camkii Substrate Complex B Length = 282

Iteration: 1
 Score = 50.1 bits (118), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 51/201 (25%), Positives = 83/201 (41%), Gaps = 28/201 (13%)
Query: 387 GGGAEIAVKRISHENDG--------GTRAFLA--------EISSLGRLKHKSLVGLRGWC 430
           G GA   V+R  H+  G         T+   A        E     +L+H ++V L    
Sbjct: 14  GKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHD-S 72
Query: 431 KREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVL 490
            +E+    LV+D +  G L + I         S  +    ++ +   + Y H      ++
Sbjct: 73  IQEESFHYLVFDLVTGGELFEDIV---AREFYSEADASHCIQQILESIAYCHSN---GIV 126
Query: 491 HRDIKSSNVLLDKEMNG---RLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRAS 547
           HR++K  N+LL  +  G   +L DFGLA      +        GT GYL+PEV      S
Sbjct: 127 HRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHG--FAGTPGYLSPEVLKKDPYS 184
Query: 548 TQTDVFGFGILILEVLSGRRP 568
              D++  G+++  +L G  P
Sbjct: 185 KPVDIWACGVILYILLVGYPP 205

>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole- Pyrimidine Inhibitor Length = 364

Iteration: 1
 Score = 50.1 bits (118), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 48/181 (26%), Positives = 83/181 (45%), Gaps = 16/181 (8%)
Query: 392 IAVKRISHENDGGTRAFLA--EISSLGRLKHKSLVGLRGWCKREKG--SLMLVYDYME-- 445
           +A+K++S      T A  A  E+  +  + HK+++ L      +K       VY  ME  
Sbjct: 53  VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM 112
Query: 446 NGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEM 505
           + +L + I      M L  E    +L  +  G+ +LH      ++HRD+K SN+++  + 
Sbjct: 113 DANLCQVI-----QMELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDC 164
Query: 506 NGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSG 565
             ++ DFGLAR  G   +   T  V T  Y APEV          D++  G ++ E++  
Sbjct: 165 TLKILDFGLARTAGTSFM--MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRH 222
Query: 566 R 566
           +
Sbjct: 223 K 223

>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor, Sr- 3451 Length = 353

Iteration: 1
 Score = 50.1 bits (118), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 48/179 (26%), Positives = 82/179 (45%), Gaps = 12/179 (6%)
Query: 392 IAVKRISHENDGGTRAFLA--EISSLGRLKHKSLVGLRGWCKREKG--SLMLVYDYMENG 447
           +A+K++S      T A  A  E+  +  + HK+++ L      +K       VY  ME  
Sbjct: 52  VAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVME-- 109
Query: 448 SLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNG 507
            +D  + Q    M L  E    +L  +  G+ +LH      ++HRD+K SN+++  +   
Sbjct: 110 LMDANLCQV-IQMELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDXTL 165
Query: 508 RLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGR 566
           ++ DFGLAR  G   +   T  V T  Y APEV          D++  G ++ E++  +
Sbjct: 166 KILDFGLARTAGTSFM--MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 222

>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6 Length = 317

Iteration: 1
 Score = 50.1 bits (118), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 50/165 (30%), Positives = 73/165 (44%), Gaps = 14/165 (8%)
Query: 411 EISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRV 470
           EI +   L+H ++V  +         L +V +Y   G L + I  C+       E R   
Sbjct: 65  EIINHRSLRHPNIVRFKEVI-LTPTHLAIVMEYASGGELFERI--CNAGRFSEDEARF-F 120
Query: 471 LKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRL--GDFGLARMHG-HGQVASTT 527
            + + +GV Y H     +V HRD+K  N LLD     RL   DFG ++    H Q  S  
Sbjct: 121 FQQLISGVSYAHA---MQVAHRDLKLENTLLDGSPAPRLKIADFGYSKASVLHSQPKSA- 176
Query: 528 RVVGTVGYLAPEVFSSGRASTQ-TDVFGFGILILEVLSGRRPIEE 571
             VGT  Y+APEV        +  DV+  G+ +  +L G  P E+
Sbjct: 177 --VGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFED 219

>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To Mapkap Kinase-2 Length = 327

Iteration: 1
 Score = 50.1 bits (118), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 39/139 (28%), Positives = 63/139 (45%), Gaps = 11/139 (7%)
Query: 434 KGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRD 493
           +  L++V + ++ G L   I Q  G    +  E   ++K +   + YLH      + HRD
Sbjct: 87  RKCLLIVMECLDGGELFSRI-QDRGDQAFTEREASEIMKSIGEAIQYLHSI---NIAHRD 142
Query: 494 IKSSNVLL-DKEMNG--RLGDFGLAR-MHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQ 549
           +K  N+L   K  N   +L DFG A+    H    S T    T  Y+APEV    +    
Sbjct: 143 VKPENLLYTSKRPNAILKLTDFGFAKETTSHN---SLTTPCYTPYYVAPEVLGPEKYDKS 199
Query: 550 TDVFGFGILILEVLSGRRP 568
            D++  G+++  +L G  P
Sbjct: 200 CDMWSLGVIMYILLCGYPP 218

>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal Sh3 Domain Length = 341

Iteration: 1
 Score = 50.1 bits (118), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 46/165 (27%), Positives = 77/165 (46%), Gaps = 12/165 (7%)
Query: 408 FLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEER 467
           F+ E++++  L H++L+ L G        + +V +    GSL   + +  G  +L    R
Sbjct: 62  FIREVNAMHSLDHRNLIRLYGVVL--TPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSR 119
Query: 468 IRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQ---VA 524
             V   VA G+ YL     K+ +HRD+ + N+LL      ++GDFGL R         V 
Sbjct: 120 YAV--QVAEGMGYLES---KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVM 174
Query: 525 STTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLS-GRRP 568
              R V    + APE   +   S  +D + FG+ + E+ + G+ P
Sbjct: 175 QEHRKV-PFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEP 218

>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk Inhibitor For The Prevention Of Ischemia-Reperfusion Injury Length = 464

Iteration: 1
 Score = 50.1 bits (118), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 48/181 (26%), Positives = 83/181 (45%), Gaps = 16/181 (8%)
Query: 392 IAVKRISHENDGGTRAFLA--EISSLGRLKHKSLVGLRGWCKREKG--SLMLVYDYME-- 445
           +A+K++S      T A  A  E+  +  + HK+++ L      +K       VY  ME  
Sbjct: 90  VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM 149
Query: 446 NGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEM 505
           + +L + I      M L  E    +L  +  G+ +LH      ++HRD+K SN+++  + 
Sbjct: 150 DANLCQVI-----QMELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDC 201
Query: 506 NGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSG 565
             ++ DFGLAR  G   +   T  V T  Y APEV          D++  G ++ E++  
Sbjct: 202 TLKILDFGLARTAGTSFM--MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRH 259
Query: 566 R 566
           +
Sbjct: 260 K 260

>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1 Length = 319

Iteration: 1
 Score = 50.1 bits (118), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 39/139 (28%), Positives = 63/139 (45%), Gaps = 11/139 (7%)
Query: 434 KGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRD 493
           +  L++V + ++ G L   I Q  G    +  E   ++K +   + YLH      + HRD
Sbjct: 86  RKCLLIVMECLDGGELFSRI-QDRGDQAFTEREASEIMKSIGEAIQYLHSI---NIAHRD 141
Query: 494 IKSSNVLL-DKEMNG--RLGDFGLAR-MHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQ 549
           +K  N+L   K  N   +L DFG A+    H    S T    T  Y+APEV    +    
Sbjct: 142 VKPENLLYTSKRPNAILKLTDFGFAKETTSHN---SLTTPCYTPYYVAPEVLGPEKYDKS 198
Query: 550 TDVFGFGILILEVLSGRRP 568
            D++  G+++  +L G  P
Sbjct: 199 CDMWSLGVIMYILLCGYPP 217

>pdb|3KK8|A Chain A, Camkii Substrate Complex A Length = 284

Iteration: 1
 Score = 50.1 bits (118), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 51/201 (25%), Positives = 83/201 (41%), Gaps = 28/201 (13%)
Query: 387 GGGAEIAVKRISHENDG--------GTRAFLA--------EISSLGRLKHKSLVGLRGWC 430
           G GA   V+R  H+  G         T+   A        E     +L+H ++V L    
Sbjct: 15  GKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHD-S 73
Query: 431 KREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVL 490
            +E+    LV+D +  G L + I         S  +    ++ +   + Y H      ++
Sbjct: 74  IQEESFHYLVFDLVTGGELFEDIV---AREFYSEADASHCIQQILESIAYCHSN---GIV 127
Query: 491 HRDIKSSNVLLDKEMNG---RLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRAS 547
           HR++K  N+LL  +  G   +L DFGLA      +        GT GYL+PEV      S
Sbjct: 128 HRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHG--FAGTPGYLSPEVLKKDPYS 185
Query: 548 TQTDVFGFGILILEVLSGRRP 568
              D++  G+++  +L G  P
Sbjct: 186 KPVDIWACGVILYILLVGYPP 206

>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562 Length = 364

Iteration: 1
 Score = 50.1 bits (118), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 48/181 (26%), Positives = 83/181 (45%), Gaps = 16/181 (8%)
Query: 392 IAVKRISHENDGGTRAFLA--EISSLGRLKHKSLVGLRGWCKREKG--SLMLVYDYME-- 445
           +A+K++S      T A  A  E+  +  + HK+++ L      +K       VY  ME  
Sbjct: 52  VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM 111
Query: 446 NGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEM 505
           + +L + I      M L  E    +L  +  G+ +LH      ++HRD+K SN+++  + 
Sbjct: 112 DANLXQVI-----QMELDHERMSYLLYQMLXGIKHLHSA---GIIHRDLKPSNIVVKSDX 163
Query: 506 NGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSG 565
             ++ DFGLAR  G   +   T  V T  Y APEV          D++  G ++ E++  
Sbjct: 164 TLKILDFGLARTAGTSFM--MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRH 221
Query: 566 R 566
           +
Sbjct: 222 K 222

>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor Length = 275

Iteration: 1
 Score = 50.1 bits (118), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 46/165 (27%), Positives = 78/165 (47%), Gaps = 12/165 (7%)
Query: 408 FLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEER 467
           F+ E++++  L H++L+ L G        + +V +    GSL   + +  G  +L    R
Sbjct: 58  FIREVNAMHSLDHRNLIRLYGVVL--TPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSR 115
Query: 468 IRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLAR---MHGHGQVA 524
             V   VA G+ YL     K+ +HRD+ + N+LL      ++GDFGL R    +    V 
Sbjct: 116 YAV--QVAEGMGYLES---KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVM 170
Query: 525 STTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLS-GRRP 568
              R V    + APE   +   S  +D + FG+ + E+ + G+ P
Sbjct: 171 QEHRKV-PFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEP 214

>pdb|1IOA|A Chain A, Arcelin-5, A Lectin-Like Defense Protein From Phaseolus Vulgaris Length = 240

Iteration: 1
 Score = 50.1 bits (118), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 66/265 (24%), Positives = 108/265 (40%), Gaps = 63/265 (23%)
Query: 28  FVFNGFNSSN-LSLYGTATVESR---ILTLTNSTTF----TIGRALYPSKIPTKRPNSSY 79
           F F  F++ + L L G AT+ S+    LT   S       ++GRA Y   I  K  N+  
Sbjct: 6   FNFPNFHTDDKLILQGNATISSKGQLQLTGVGSNELPRVDSLGRAFYSDPIQIKDSNN-- 63
Query: 80  VYPFSTSFIFAMAPYKGVLAGHGLVFLFVPFHGIKGATEAQHLGLFNRTNDGNSSNHVFG 139
           V  F+T+F F +      ++ +GL F  VP +      + + LG+FN TN+   +     
Sbjct: 64  VASFNTNFTFIIRAKNQSISAYGLAFALVPVNS-PPQKKQEFLGIFN-TNNPEPNARTVA 121
Query: 140 VEFDVFKNQEFNDIDENHVGIDVNSLTSVSAHAAGYWPDNQXXXXXXXXXXXXXXXEKSF 199
           V F+ FKN+   D D+N +   VN       +                            
Sbjct: 122 VVFNTFKNRI--DFDKNFIKPYVNENCDFHKY---------------------------- 151
Query: 200 KELKLNNGKNYQVWIDYADS------FINITMVEAGMKRPKRPLLSVPLNLSGVLEDEMY 253
                 NG+   V I Y  S      F++ T+ +          +S  ++L   +++ + 
Sbjct: 152 ------NGEKTDVQITYDSSNNDLRVFLHFTVSQVKCS------VSATVHLEKEVDEWVS 199
Query: 254 VGFTAATG---QLVESHKILAWSFS 275
           VGF+  +G      E+H +L+WSFS
Sbjct: 200 VGFSPTSGLTEDTTETHDVLSWSFS 224

>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3- Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide Length = 365

Iteration: 1
 Score = 50.1 bits (118), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 48/181 (26%), Positives = 83/181 (45%), Gaps = 16/181 (8%)
Query: 392 IAVKRISHENDGGTRAFLA--EISSLGRLKHKSLVGLRGWCKREKG--SLMLVYDYME-- 445
           +A+K++S      T A  A  E+  +  + HK+++ L      +K       VY  ME  
Sbjct: 53  VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM 112
Query: 446 NGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEM 505
           + +L + I      M L  E    +L  +  G+ +LH      ++HRD+K SN+++  + 
Sbjct: 113 DANLCQVI-----QMELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDC 164
Query: 506 NGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSG 565
             ++ DFGLAR  G   +   T  V T  Y APEV          D++  G ++ E++  
Sbjct: 165 TLKILDFGLARTAGTSFM--MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRH 222
Query: 566 R 566
           +
Sbjct: 223 K 223

>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b Length = 318

Iteration: 1
 Score = 50.1 bits (118), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 39/139 (28%), Positives = 63/139 (45%), Gaps = 11/139 (7%)
Query: 434 KGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRD 493
           +  L++V + ++ G L   I Q  G    +  E   ++K +   + YLH      + HRD
Sbjct: 85  RKCLLIVMECLDGGELFSRI-QDRGDQAFTEREASEIMKSIGEAIQYLHSI---NIAHRD 140
Query: 494 IKSSNVLL-DKEMNG--RLGDFGLAR-MHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQ 549
           +K  N+L   K  N   +L DFG A+    H    S T    T  Y+APEV    +    
Sbjct: 141 VKPENLLYTSKRPNAILKLTDFGFAKETTSHN---SLTTPCYTPYYVAPEVLGPEKYDKS 197
Query: 550 TDVFGFGILILEVLSGRRP 568
            D++  G+++  +L G  P
Sbjct: 198 CDMWSLGVIMYILLCGYPP 216

>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And Unphosphorylated Kinase Domains Of The Cdc42-Associated Tyrosine Kinase Ack1 Bound To Amp-Pcp Length = 291

Iteration: 1
 Score = 50.1 bits (118), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 46/165 (27%), Positives = 78/165 (47%), Gaps = 12/165 (7%)
Query: 408 FLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEER 467
           F+ E++++  L H++L+ L G        + +V +    GSL   + +  G  +L    R
Sbjct: 68  FIREVNAMHSLDHRNLIRLYGVVL--TPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSR 125
Query: 468 IRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLAR---MHGHGQVA 524
             V   VA G+ YL     K+ +HRD+ + N+LL      ++GDFGL R    +    V 
Sbjct: 126 YAV--QVAEGMGYLES---KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVM 180
Query: 525 STTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLS-GRRP 568
              R V    + APE   +   S  +D + FG+ + E+ + G+ P
Sbjct: 181 QEHRKV-PFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEP 224

>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands Length = 334

Iteration: 1
 Score = 50.1 bits (118), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 39/139 (28%), Positives = 63/139 (45%), Gaps = 11/139 (7%)
Query: 434 KGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRD 493
           +  L++V + ++ G L   I Q  G    +  E   ++K +   + YLH      + HRD
Sbjct: 101 RKCLLIVMECLDGGELFSRI-QDRGDQAFTEREASEIMKSIGEAIQYLHS---INIAHRD 156
Query: 494 IKSSNVLL-DKEMNG--RLGDFGLAR-MHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQ 549
           +K  N+L   K  N   +L DFG A+    H    S T    T  Y+APEV    +    
Sbjct: 157 VKPENLLYTSKRPNAILKLTDFGFAKETTSHN---SLTTPCYTPYYVAPEVLGPEKYDKS 213
Query: 550 TDVFGFGILILEVLSGRRP 568
            D++  G+++  +L G  P
Sbjct: 214 CDMWSLGVIMYILLCGYPP 232

>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95 Length = 276

Iteration: 1
 Score = 49.7 bits (117), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 46/165 (27%), Positives = 77/165 (46%), Gaps = 12/165 (7%)
Query: 408 FLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEER 467
           F+ E++++  L H++L+ L G        + +V +    GSL   + +  G  +L    R
Sbjct: 58  FIREVNAMHSLDHRNLIRLYGVVL--TPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSR 115
Query: 468 IRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQ---VA 524
             V   VA G+ YL     K+ +HRD+ + N+LL      ++GDFGL R         V 
Sbjct: 116 YAV--QVAEGMGYLES---KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVM 170
Query: 525 STTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLS-GRRP 568
              R V    + APE   +   S  +D + FG+ + E+ + G+ P
Sbjct: 171 QEHRKV-PFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEP 214

>pdb|2OZA|A Chain A, Structure Of P38alpha Complex Length = 356

Iteration: 1
 Score = 49.7 bits (117), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 39/139 (28%), Positives = 63/139 (45%), Gaps = 11/139 (7%)
Query: 434 KGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRD 493
           +  L++V + ++ G L   I Q  G    +  E   ++K +   + YLH      + HRD
Sbjct: 87  RKCLLIVMECLDGGELFSRI-QDRGDQAFTEREASEIMKSIGEAIQYLHSI---NIAHRD 142
Query: 494 IKSSNVLL-DKEMNG--RLGDFGLAR-MHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQ 549
           +K  N+L   K  N   +L DFG A+    H    S T    T  Y+APEV    +    
Sbjct: 143 VKPENLLYTSKRPNAILKLTDFGFAKETTSHN---SLTTPCYTPYYVAPEVLGPEKYDKS 199
Query: 550 TDVFGFGILILEVLSGRRP 568
            D++  G+++  +L G  P
Sbjct: 200 CDMWSLGVIMYILLCGYPP 218

>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2 Length = 400

Iteration: 1
 Score = 49.7 bits (117), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 39/139 (28%), Positives = 63/139 (45%), Gaps = 11/139 (7%)
Query: 434 KGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRD 493
           +  L++V + ++ G L   I Q  G    +  E   ++K +   + YLH      + HRD
Sbjct: 131 RKCLLIVMECLDGGELFSRI-QDRGDQAFTEREASEIMKSIGEAIQYLHSI---NIAHRD 186
Query: 494 IKSSNVLL-DKEMNG--RLGDFGLAR-MHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQ 549
           +K  N+L   K  N   +L DFG A+    H    S T    T  Y+APEV    +    
Sbjct: 187 VKPENLLYTSKRPNAILKLTDFGFAKETTSHN---SLTTPCYTPYYVAPEVLGPEKYDKS 243
Query: 550 TDVFGFGILILEVLSGRRP 568
            D++  G+++  +L G  P
Sbjct: 244 CDMWSLGVIMYILLCGYPP 262

>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of The Tyrosine Kinase Ack1 Length = 291

Iteration: 1
 Score = 49.7 bits (117), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 46/165 (27%), Positives = 77/165 (46%), Gaps = 12/165 (7%)
Query: 408 FLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEER 467
           F+ E++++  L H++L+ L G        + +V +    GSL   + +  G  +L    R
Sbjct: 68  FIREVNAMHSLDHRNLIRLYGVVL--TPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSR 125
Query: 468 IRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQ---VA 524
             V   VA G+ YL     K+ +HRD+ + N+LL      ++GDFGL R         V 
Sbjct: 126 YAV--QVAEGMGYLES---KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVM 180
Query: 525 STTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLS-GRRP 568
              R V    + APE   +   S  +D + FG+ + E+ + G+ P
Sbjct: 181 QEHRKV-PFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEP 224

>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of Camp-Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 49.7 bits (117), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 35/110 (31%), Positives = 57/110 (51%), Gaps = 12/110 (10%)
Query: 480 YLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLA-RMHGHGQVASTTRVVGTVGYLAP 538
           YLH      +++RD+K  N+L+D++   ++ DFG A R+ G      T  + GT   LAP
Sbjct: 156 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-----TWXLCGTPEALAP 207
Query: 539 EVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGK 588
           E+  S   +   D +  G+LI E+ +G  P    +P     ++E +V GK
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPI---QIYEKIVSGK 254

>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With N-(4-chlorophenyl)-2- ((pyridin-4-ylmethyl)amino)benzamide Length = 360

Iteration: 1
 Score = 49.7 bits (117), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 42/165 (25%), Positives = 73/165 (44%), Gaps = 18/165 (10%)
Query: 474 VAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLAR-MHGHGQVASTTRVVGT 532
           VA G+ +L     +K +HRD+ + N+LL +    ++ DFGLAR ++ +            
Sbjct: 208 VARGMEFLSS---RKCIHRDLAARNILLSENNVVKICDFGLARDIYKNPDYVRKGDTRLP 264
Query: 533 VGYLAPEVFSSGRASTQTDVFGFGILILEVLS-GRRPIEEGKPNLVEMVWELMVQGKXXX 591
           + ++APE       ST++DV+ +G+L+ E+ S G  P     P          VQ     
Sbjct: 265 LKWMAPESIFDKIYSTKSDVWSYGVLLWEIFSLGGSPY----PG---------VQMDEDF 311
Query: 592 XXXXXXXXKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVL 636
                   +    E     +  + L C + DP+ RP   ++V+ L
Sbjct: 312 CSRLREGMRMRAPEYSTPEIYQIMLDCWHRDPKERPRFAELVEKL 356

>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor Cis-3-[8-amino-1-(4- Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol Length = 273

Iteration: 1
 Score = 49.7 bits (117), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 46/165 (27%), Positives = 77/165 (46%), Gaps = 12/165 (7%)
Query: 408 FLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEER 467
           F+ E++++  L H++L+ L G        + +V +    GSL   + +  G  +L    R
Sbjct: 58  FIREVNAMHSLDHRNLIRLYGVVL--TPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSR 115
Query: 468 IRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQ---VA 524
             V   VA G+ YL     K+ +HRD+ + N+LL      ++GDFGL R         V 
Sbjct: 116 YAV--QVAEGMGYLES---KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVM 170
Query: 525 STTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLS-GRRP 568
              R V    + APE   +   S  +D + FG+ + E+ + G+ P
Sbjct: 171 QEHRKV-PFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEP 214

>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase (gak) Length = 337

Iteration: 1
 Score = 49.3 bits (116), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 46/207 (22%), Positives = 88/207 (42%), Gaps = 22/207 (10%)
Query: 387 GGGAEIAVKRISHENDGGTRAFLAEISSLGRLK-HKSLVGLR-----GWCKREKGSL-ML 439
           G G E A+KR+    +   RA + E+  + +L  H ++V        G  + + G    L
Sbjct: 51  GSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQAEFL 110
Query: 440 VYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNV 499
           +   +  G L +++ + +    LSC+  +++       V ++H   +  ++HRD+K  N+
Sbjct: 111 LLTELCKGQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHR-QKPPIIHRDLKVENL 169
Query: 500 LLDKEMNGRLGDFGLARMHGH-----------GQVASTTRVVGTVGYLAPEV---FSSGR 545
           LL  +   +L DFG A    H             V        T  Y  PE+   +S+  
Sbjct: 170 LLSNQGTIKLCDFGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFP 229
Query: 546 ASTQTDVFGFGILILEVLSGRRPIEEG 572
              + D++  G ++  +   + P E+G
Sbjct: 230 IGEKQDIWALGCILYLLCFRQHPFEDG 256

>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer Length = 406

Iteration: 1
 Score = 49.3 bits (116), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 39/139 (28%), Positives = 63/139 (45%), Gaps = 11/139 (7%)
Query: 434 KGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRD 493
           +  L++V + ++ G L   I Q  G    +  E   ++K +   + YLH      + HRD
Sbjct: 137 RKCLLIVMECLDGGELFSRI-QDRGDQAFTEREASEIMKSIGEAIQYLHSI---NIAHRD 192
Query: 494 IKSSNVLL-DKEMNG--RLGDFGLAR-MHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQ 549
           +K  N+L   K  N   +L DFG A+    H    S T    T  Y+APEV    +    
Sbjct: 193 VKPENLLYTSKRPNAILKLTDFGFAKETTSHN---SLTTPCYTPYYVAPEVLGPEKYDKS 249
Query: 550 TDVFGFGILILEVLSGRRP 568
            D++  G+++  +L G  P
Sbjct: 250 CDMWSLGVIMYILLCGYPP 268

>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain Length = 277

Iteration: 1
 Score = 49.3 bits (116), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 46/165 (27%), Positives = 77/165 (46%), Gaps = 12/165 (7%)
Query: 408 FLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEER 467
           F+ E++++  L H++L+ L G        + +V +    GSL   + +  G  +L    R
Sbjct: 62  FIREVNAMHSLDHRNLIRLYGVVL--TPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSR 119
Query: 468 IRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQ---VA 524
             V   VA G+ YL     K+ +HRD+ + N+LL      ++GDFGL R         V 
Sbjct: 120 YAV--QVAEGMGYLES---KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVM 174
Query: 525 STTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLS-GRRP 568
              R V    + APE   +   S  +D + FG+ + E+ + G+ P
Sbjct: 175 QEHRKV-PFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEP 218

>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In Complex With Adp Length = 432

Iteration: 1
 Score = 49.3 bits (116), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 62/255 (24%), Positives = 107/255 (41%), Gaps = 32/255 (12%)
Query: 391 EIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLD 450
           ++AVKRI  E      +F      L R   +    +R +C  +      +   +   +L 
Sbjct: 50  DVAVKRILPE----CFSFADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAIELCAATLQ 105
Query: 451 KWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDK-----EM 505
           +++ Q D + +    E I +L+   +G+ +LH      ++HRD+K  N+L+       ++
Sbjct: 106 EYVEQKDFAHLGL--EPITLLQQTTSGLAHLHS---LNIVHRDLKPHNILISMPNAHGKI 160
Query: 506 NGRLGDFGLARMHGHGQVASTTR--VVGTVGYLAPEVFSSGRASTQT---DVFGFGILIL 560
              + DFGL +    G+ + + R  V GT G++APE+ S       T   D+F  G +  
Sbjct: 161 KAMISDFGLCKKLAVGRHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFY 220
Query: 561 EVLS-GRRPIEEGKPNLVEMVWELMVQGKXXXXXXXXXXXKGGFDEDEVERVLHLGLLCA 619
            V+S G  P   GK         L  Q                  ED + R L   ++  
Sbjct: 221 YVISEGSHPF--GK--------SLQRQANILLGACSLDCLHPEKHEDVIARELIEKMIAM 270
Query: 620 YPDPRARPTMRQVVK 634
             DP+ RP+ + V+K
Sbjct: 271 --DPQKRPSAKHVLK 283

>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent Protein Kinase Ii Delta Isoform 1, Camkd Length = 301

Iteration: 1
 Score = 49.3 bits (116), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 44/154 (28%), Positives = 70/154 (45%), Gaps = 11/154 (7%)
Query: 418 LKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAG 477
           LKH ++V L      E+G   LV+D +  G L + I         S  +    ++ +   
Sbjct: 60  LKHPNIVRLHDSIS-EEGFHYLVFDLVTGGELFEDIV---AREYYSEADASHCIQQILES 115
Query: 478 VLYLHEGWEKKVLHRDIKSSNVLLDKEMNG---RLGDFGLARMHGHGQVASTTRVVGTVG 534
           V + H      ++HRD+K  N+LL  +  G   +L DFGLA +   G   +     GT G
Sbjct: 116 VNHCHLN---GIVHRDLKPENLLLASKSKGAAVKLADFGLA-IEVQGDQQAWFGFAGTPG 171
Query: 535 YLAPEVFSSGRASTQTDVFGFGILILEVLSGRRP 568
           YL+PEV          D++  G+++  +L G  P
Sbjct: 172 YLSPEVLRKDPYGKPVDMWACGVILYILLVGYPP 205

>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN- Dependent Protein Kinase Ii Delta In Complex With Calmodulin Length = 327

Iteration: 1
 Score = 49.3 bits (116), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 44/154 (28%), Positives = 70/154 (45%), Gaps = 11/154 (7%)
Query: 418 LKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAG 477
           LKH ++V L      E+G   LV+D +  G L + I         S  +    ++ +   
Sbjct: 60  LKHPNIVRLHDSIS-EEGFHYLVFDLVTGGELFEDIV---AREYYSEADASHCIQQILES 115
Query: 478 VLYLHEGWEKKVLHRDIKSSNVLLDKEMNG---RLGDFGLARMHGHGQVASTTRVVGTVG 534
           V + H      ++HRD+K  N+LL  +  G   +L DFGLA +   G   +     GT G
Sbjct: 116 VNHCHLN---GIVHRDLKPENLLLASKSKGAAVKLADFGLA-IEVQGDQQAWFGFAGTPG 171
Query: 535 YLAPEVFSSGRASTQTDVFGFGILILEVLSGRRP 568
           YL+PEV          D++  G+++  +L G  P
Sbjct: 172 YLSPEVLRKDPYGKPVDMWACGVILYILLVGYPP 205

>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A 2-Anilino-5-Aryl-Oxazole Inhibitor Length = 366

Iteration: 1
 Score = 49.3 bits (116), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 28/92 (30%), Positives = 50/92 (54%), Gaps = 4/92 (4%)
Query: 474 VAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLAR-MHGHGQVASTTRVVGT 532
           VA G+ +L     +K +HRD+ + N+LL ++   ++ DFGLAR ++              
Sbjct: 207 VAKGMEFLAS---RKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 263
Query: 533 VGYLAPEVFSSGRASTQTDVFGFGILILEVLS 564
           + ++APE       + Q+DV+ FG+L+ E+ S
Sbjct: 264 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 295

>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For Catalysis And Regulation Of Non-conventional Splicing Length = 434

Iteration: 1
 Score = 49.3 bits (116), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 36/125 (28%), Positives = 60/125 (48%), Gaps = 27/125 (21%)
Query: 468 IRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLL--------DKEMNGR-----LGDFGL 514
           I +L+ +A+GV +LH     K++HRD+K  N+L+        D++         + DFGL
Sbjct: 118 ISLLRQIASGVAHLHS---LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGL 174
Query: 515 ARMHGHGQVASTTRV---VGTVGYLAPEVF-------SSGRASTQTDVFGFGILILEVLS 564
            +    GQ +  T +    GT G+ APE+        +  R +   D+F  G +   +LS
Sbjct: 175 CKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILS 234
Query: 565 -GRRP 568
            G+ P
Sbjct: 235 KGKHP 239

>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A Novel Pyrrolopyrimidine Inhibitor Length = 359

Iteration: 1
 Score = 48.9 bits (115), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 28/92 (30%), Positives = 50/92 (54%), Gaps = 4/92 (4%)
Query: 474 VAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLAR-MHGHGQVASTTRVVGT 532
           VA G+ +L     +K +HRD+ + N+LL ++   ++ DFGLAR ++              
Sbjct: 202 VAKGMEFLAS---RKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 258
Query: 533 VGYLAPEVFSSGRASTQTDVFGFGILILEVLS 564
           + ++APE       + Q+DV+ FG+L+ E+ S
Sbjct: 259 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 290

>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With Compound A Length = 356

Iteration: 1
 Score = 48.9 bits (115), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 28/92 (30%), Positives = 50/92 (54%), Gaps = 4/92 (4%)
Query: 474 VAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLAR-MHGHGQVASTTRVVGT 532
           VA G+ +L     +K +HRD+ + N+LL ++   ++ DFGLAR ++              
Sbjct: 200 VAKGMEFLAS---RKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 256
Query: 533 VGYLAPEVFSSGRASTQTDVFGFGILILEVLS 564
           + ++APE       + Q+DV+ FG+L+ E+ S
Sbjct: 257 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 288

>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of CalciumCALMODULIN ACTIVATED KINASE II Length = 362

Iteration: 1
 Score = 48.9 bits (115), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 53/208 (25%), Positives = 84/208 (40%), Gaps = 42/208 (20%)
Query: 387 GGGAEIAVKRISHENDG--------GTRAFLA--------EISSLGRLKHKSLVGLRGWC 430
           G GA   V+R  H+  G         T+   A        E     +L+H ++V L    
Sbjct: 38  GKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSI 97
Query: 431 KREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVL 490
           + E+    LV+D +  G L + I         S  +    ++ +   + Y H      ++
Sbjct: 98  Q-EESFHYLVFDLVTGGELFEDIV---AREFYSEADASHCIQQILESIAYCHSN---GIV 150
Query: 491 HRDIKSSNVLLDKEMNG---RLGDFGLA-------RMHGHGQVASTTRVVGTVGYLAPEV 540
           HR++K  N+LL  +  G   +L DFGLA         HG           GT GYL+PEV
Sbjct: 151 HRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHG---------FAGTPGYLSPEV 201
Query: 541 FSSGRASTQTDVFGFGILILEVLSGRRP 568
                 S   D++  G+++  +L G  P
Sbjct: 202 LKKDPYSKPVDIWACGVILYILLVGYPP 229

>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Back Pocket Binder Length = 368

Iteration: 1
 Score = 48.9 bits (115), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 28/92 (30%), Positives = 50/92 (54%), Gaps = 4/92 (4%)
Query: 474 VAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLAR-MHGHGQVASTTRVVGT 532
           VA G+ +L     +K +HRD+ + N+LL ++   ++ DFGLAR ++              
Sbjct: 209 VAKGMEFLAS---RKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 265
Query: 533 VGYLAPEVFSSGRASTQTDVFGFGILILEVLS 564
           + ++APE       + Q+DV+ FG+L+ E+ S
Sbjct: 266 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 297

>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium Dependent Protein Kinase Cgd7_1840 In Presence Of Indirubin E804 Length = 277

Iteration: 1
 Score = 48.9 bits (115), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 34/103 (33%), Positives = 52/103 (50%), Gaps = 9/103 (8%)
Query: 469 RVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLL---DKEMNGRLGDFGLARMHGHGQVAS 525
           R++KDV + V Y H   +  V HRD+K  N L      +   +L DFGLA     G++  
Sbjct: 110 RIMKDVLSAVAYCH---KLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMR 166
Query: 526 TTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRP 568
           T   VGT  Y++P+V   G    + D +  G+++  +L G  P
Sbjct: 167 TK--VGTPYYVSPQVL-EGLYGPECDEWSAGVMMYVLLCGYPP 206

>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin Peptide And Inhibitor 7d Length = 350

Iteration: 1
 Score = 48.9 bits (115), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 51/205 (24%), Positives = 90/205 (43%), Gaps = 18/205 (8%)
Query: 385 LEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWC-----KREKGSLML 439
           L   G  +A+K++  +     R    E+  + +L H ++V LR +      K+++  L L
Sbjct: 41  LCDSGELVAIKKVLQDKRFKNR----ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNL 96
Query: 440 VYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNV 499
           V DY+                 L        +  +   + Y+H      + HRDIK  N+
Sbjct: 97  VLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG---ICHRDIKPQNL 153
Query: 500 LLDKEMNG-RLGDFGLARMHGHGQVASTTRVVGTVGYLAPE-VFSSGRASTQTDVFGFGI 557
           LLD +    +L DFG A+    G+       + +  Y APE +F +   ++  DV+  G 
Sbjct: 154 LLDPDTAVLKLCDFGSAKQLVRGE--PNVSXICSRYYRAPELIFGATDYTSSIDVWSAGC 211
Query: 558 LILEVLSGRR--PIEEGKPNLVEMV 580
           ++ E+L G+   P + G   LVE++
Sbjct: 212 VLAELLLGQPIFPGDSGVDQLVEII 236

>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase 3beta In Complex With An Inhibitor Length = 350

Iteration: 1
 Score = 48.9 bits (115), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 51/205 (24%), Positives = 90/205 (43%), Gaps = 18/205 (8%)
Query: 385 LEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWC-----KREKGSLML 439
           L   G  +A+K++  +     R    E+  + +L H ++V LR +      K+++  L L
Sbjct: 42  LCDSGELVAIKKVLQDKRFKNR----ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNL 97
Query: 440 VYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNV 499
           V DY+                 L        +  +   + Y+H      + HRDIK  N+
Sbjct: 98  VLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG---ICHRDIKPQNL 154
Query: 500 LLDKEMNG-RLGDFGLARMHGHGQVASTTRVVGTVGYLAPE-VFSSGRASTQTDVFGFGI 557
           LLD +    +L DFG A+    G+       + +  Y APE +F +   ++  DV+  G 
Sbjct: 155 LLDPDTAVLKLCDFGSAKQLVRGE--PNVSXICSRYYRAPELIFGATDYTSSIDVWSAGC 212
Query: 558 LILEVLSGRR--PIEEGKPNLVEMV 580
           ++ E+L G+   P + G   LVE++
Sbjct: 213 VLAELLLGQPIFPGDSGVDQLVEII 237

>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis- (Indole)maleimide Pyridinophane Inhibitor Length = 352

Iteration: 1
 Score = 48.9 bits (115), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 51/205 (24%), Positives = 90/205 (43%), Gaps = 18/205 (8%)
Query: 385 LEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWC-----KREKGSLML 439
           L   G  +A+K++  +     R    E+  + +L H ++V LR +      K+++  L L
Sbjct: 41  LCDSGELVAIKKVLQDKRFKNR----ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNL 96
Query: 440 VYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNV 499
           V DY+                 L        +  +   + Y+H      + HRDIK  N+
Sbjct: 97  VLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG---ICHRDIKPQNL 153
Query: 500 LLDKEMNG-RLGDFGLARMHGHGQVASTTRVVGTVGYLAPE-VFSSGRASTQTDVFGFGI 557
           LLD +    +L DFG A+    G+       + +  Y APE +F +   ++  DV+  G 
Sbjct: 154 LLDPDTAVLKLCDFGSAKQLVRGE--PNVSXICSRYYRAPELIFGATDYTSSIDVWSAGC 211
Query: 558 LILEVLSGRR--PIEEGKPNLVEMV 580
           ++ E+L G+   P + G   LVE++
Sbjct: 212 VLAELLLGQPIFPGDSGVDQLVEII 236

>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor That Attenuates Hyperactivity In Clock Mutant Mice Length = 350

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 51/205 (24%), Positives = 90/205 (43%), Gaps = 18/205 (8%)
Query: 385 LEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWC-----KREKGSLML 439
           L   G  +A+K++  +     R    E+  + +L H ++V LR +      K+++  L L
Sbjct: 41  LCDSGELVAIKKVLQDKRFKNR----ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNL 96
Query: 440 VYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNV 499
           V DY+                 L        +  +   + Y+H      + HRDIK  N+
Sbjct: 97  VLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG---ICHRDIKPQNL 153
Query: 500 LLDKEMNG-RLGDFGLARMHGHGQVASTTRVVGTVGYLAPE-VFSSGRASTQTDVFGFGI 557
           LLD +    +L DFG A+    G+       + +  Y APE +F +   ++  DV+  G 
Sbjct: 154 LLDPDTAVLKLCDFGSAKQLVRGE--PNVSYICSRYYRAPELIFGATDYTSSIDVWSAGC 211
Query: 558 LILEVLSGRR--PIEEGKPNLVEMV 580
           ++ E+L G+   P + G   LVE++
Sbjct: 212 VLAELLLGQPIFPGDSGVDQLVEII 236

>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase Cgd7_1840 Length = 294

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 34/103 (33%), Positives = 52/103 (50%), Gaps = 9/103 (8%)
Query: 469 RVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLL---DKEMNGRLGDFGLARMHGHGQVAS 525
           R++KDV + V Y H   +  V HRD+K  N L      +   +L DFGLA     G++  
Sbjct: 127 RIMKDVLSAVAYCH---KLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMR 183
Query: 526 TTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRP 568
           T   VGT  Y++P+V   G    + D +  G+++  +L G  P
Sbjct: 184 TK--VGTPYYVSPQVL-EGLYGPECDEWSAGVMMYVLLCGYPP 223

>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis Length = 394

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 52/203 (25%), Positives = 96/203 (47%), Gaps = 26/203 (12%)
Query: 391 EIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWC-----KREKGSLMLVYDYME 445
           E+A+K++  +     R    E+  +  +KH ++V L+ +      K+++  L LV +Y+ 
Sbjct: 66  EVAIKKVLQDKRFKNR----ELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLNLVLEYVP 121
Query: 446 ----NGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLL 501
                 S      +    M+L      ++L+ +A    Y+H      + HRDIK  N+LL
Sbjct: 122 ETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLA----YIHSIG---ICHRDIKPQNLLL 174
Query: 502 DKEMNG-RLGDFGLARMHGHGQVASTTRVVGTVGYLAPE-VFSSGRASTQTDVFGFGILI 559
           D      +L DFG A++   G+       + +  Y APE +F +   +T  D++  G ++
Sbjct: 175 DPPSGVLKLIDFGSAKILIAGE--PNVSXICSRYYRAPELIFGATNYTTNIDIWSTGCVM 232
Query: 560 LEVLSGRR--PIEEGKPNLVEMV 580
            E++ G+   P E G   LVE++
Sbjct: 233 AELMQGQPLFPGESGIDQLVEII 255

>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With Frattide Peptide Length = 378

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 51/205 (24%), Positives = 90/205 (43%), Gaps = 18/205 (8%)
Query: 385 LEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWC-----KREKGSLML 439
           L   G  +A+K++  +     R    E+  + +L H ++V LR +      K+++  L L
Sbjct: 60  LCDSGELVAIKKVLQDKRFKNR----ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNL 115
Query: 440 VYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNV 499
           V DY+                 L        +  +   + Y+H      + HRDIK  N+
Sbjct: 116 VLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG---ICHRDIKPQNL 172
Query: 500 LLDKEMNG-RLGDFGLARMHGHGQVASTTRVVGTVGYLAPE-VFSSGRASTQTDVFGFGI 557
           LLD +    +L DFG A+    G+       + +  Y APE +F +   ++  DV+  G 
Sbjct: 173 LLDPDTAVLKLCDFGSAKQLVRGE--PNVSXICSRYYRAPELIFGATDYTSSIDVWSAGC 230
Query: 558 LILEVLSGRR--PIEEGKPNLVEMV 580
           ++ E+L G+   P + G   LVE++
Sbjct: 231 VLAELLLGQPIFPGDSGVDQLVEII 255

>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-3beta Inhibitors Length = 371

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 51/205 (24%), Positives = 90/205 (43%), Gaps = 18/205 (8%)
Query: 385 LEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWC-----KREKGSLML 439
           L   G  +A+K++  +     R    E+  + +L H ++V LR +      K+++  L L
Sbjct: 53  LCDSGELVAIKKVLQDKRFKNR----ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNL 108
Query: 440 VYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNV 499
           V DY+                 L        +  +   + Y+H      + HRDIK  N+
Sbjct: 109 VLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG---ICHRDIKPQNL 165
Query: 500 LLDKEMNG-RLGDFGLARMHGHGQVASTTRVVGTVGYLAPE-VFSSGRASTQTDVFGFGI 557
           LLD +    +L DFG A+    G+       + +  Y APE +F +   ++  DV+  G 
Sbjct: 166 LLDPDTAVLKLCDFGSAKQLVRGE--PNVSXICSRYYRAPELIFGATDYTSSIDVWSAGC 223
Query: 558 LILEVLSGRR--PIEEGKPNLVEMV 580
           ++ E+L G+   P + G   LVE++
Sbjct: 224 VLAELLLGQPIFPGDSGVDQLVEII 248

>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective Gsk-3 Inhibitors Length = 367

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 51/205 (24%), Positives = 90/205 (43%), Gaps = 18/205 (8%)
Query: 385 LEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWC-----KREKGSLML 439
           L   G  +A+K++  +     R    E+  + +L H ++V LR +      K+++  L L
Sbjct: 49  LCDSGELVAIKKVLQDKRFKNR----ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNL 104
Query: 440 VYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNV 499
           V DY+                 L        +  +   + Y+H      + HRDIK  N+
Sbjct: 105 VLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG---ICHRDIKPQNL 161
Query: 500 LLDKEMNG-RLGDFGLARMHGHGQVASTTRVVGTVGYLAPE-VFSSGRASTQTDVFGFGI 557
           LLD +    +L DFG A+    G+       + +  Y APE +F +   ++  DV+  G 
Sbjct: 162 LLDPDTAVLKLCDFGSAKQLVRGE--PNVSXICSRYYRAPELIFGATDYTSSIDVWSAGC 219
Query: 558 LILEVLSGRR--PIEEGKPNLVEMV 580
           ++ E+L G+   P + G   LVE++
Sbjct: 220 VLAELLLGQPIFPGDSGVDQLVEII 244

>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase Length = 362

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 50/165 (30%), Positives = 73/165 (44%), Gaps = 14/165 (8%)
Query: 411 EISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRV 470
           EI +   L+H ++V  +         L +V +Y   G L + I  C+       E R   
Sbjct: 65  EIINHRSLRHPNIVRFKEVI-LTPTHLAIVMEYASGGELFERI--CNAGRFSEDEARF-F 120
Query: 471 LKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRL--GDFGLARMHG-HGQVASTT 527
            + + +GV Y H     +V HRD+K  N LLD     RL    FG ++    H Q  ST 
Sbjct: 121 FQQLISGVSYCHA---MQVCHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQPKST- 176
Query: 528 RVVGTVGYLAPEVFSSGRASTQ-TDVFGFGILILEVLSGRRPIEE 571
             VGT  Y+APEV        +  DV+  G+ +  +L G  P E+
Sbjct: 177 --VGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFED 219

>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A Benzoimidazol Inhibitor Length = 372

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 51/205 (24%), Positives = 90/205 (43%), Gaps = 18/205 (8%)
Query: 385 LEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWC-----KREKGSLML 439
           L   G  +A+K++  +     R    E+  + +L H ++V LR +      K+++  L L
Sbjct: 54  LCDSGELVAIKKVLQDKRFKNR----ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNL 109
Query: 440 VYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNV 499
           V DY+                 L        +  +   + Y+H      + HRDIK  N+
Sbjct: 110 VLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG---ICHRDIKPQNL 166
Query: 500 LLDKEMNG-RLGDFGLARMHGHGQVASTTRVVGTVGYLAPE-VFSSGRASTQTDVFGFGI 557
           LLD +    +L DFG A+    G+       + +  Y APE +F +   ++  DV+  G 
Sbjct: 167 LLDPDTAVLKLCDFGSAKQLVRGE--PNVSYICSRYYRAPELIFGATDYTSSIDVWSAGC 224
Query: 558 LILEVLSGRR--PIEEGKPNLVEMV 580
           ++ E+L G+   P + G   LVE++
Sbjct: 225 VLAELLLGQPIFPGDSGVDQLVEII 249

>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex Length = 353

Iteration: 1
 Score = 48.1 bits (113), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 51/205 (24%), Positives = 90/205 (43%), Gaps = 18/205 (8%)
Query: 385 LEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWC-----KREKGSLML 439
           L   G  +A+K++  +     R    E+  + +L H ++V LR +      K+++  L L
Sbjct: 45  LCDSGELVAIKKVLQDKRFKNR----ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNL 100
Query: 440 VYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNV 499
           V DY+                 L        +  +   + Y+H      + HRDIK  N+
Sbjct: 101 VLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG---ICHRDIKPQNL 157
Query: 500 LLDKEMNG-RLGDFGLARMHGHGQVASTTRVVGTVGYLAPE-VFSSGRASTQTDVFGFGI 557
           LLD +    +L DFG A+    G+       + +  Y APE +F +   ++  DV+  G 
Sbjct: 158 LLDPDTAVLKLCDFGSAKQLVRGE--PNVSXICSRYYRAPELIFGATDYTSSIDVWSAGC 215
Query: 558 LILEVLSGRR--PIEEGKPNLVEMV 580
           ++ E+L G+   P + G   LVE++
Sbjct: 216 VLAELLLGQPIFPGDSGVDQLVEII 240

>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1) Length = 311

Iteration: 1
 Score = 48.1 bits (113), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 31/92 (33%), Positives = 44/92 (47%), Gaps = 6/92 (6%)
Query: 471 LKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRVV 530
           L+D    + +LH    + ++H D+K +N+ L      +LGDFGL    G           
Sbjct: 163 LRDTLLALAHLHS---QGLVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAGAGEVQE-- 217
Query: 531 GTVGYLAPEVFSSGRASTQTDVFGFGILILEV 562
           G   Y+APE+   G   T  DVF  G+ ILEV
Sbjct: 218 GDPRYMAPELL-QGSYGTAADVFSLGLTILEV 248

>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric KinaseRNASE Ire1 Length = 448

Iteration: 1
 Score = 48.1 bits (113), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 35/121 (28%), Positives = 58/121 (47%), Gaps = 23/121 (19%)
Query: 468 IRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLL--------DKEMNGR-----LGDFGL 514
           I +L+ +A+GV +LH     K++HRD+K  N+L+        D++         + DFGL
Sbjct: 136 ISLLRQIASGVAHLHS---LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGL 192
Query: 515 ARMHGHGQV---ASTTRVVGTVGYLAPEVF---SSGRASTQTDVFGFGILILEVLS-GRR 567
            +    GQ     +     GT G+ APE+    +  R +   D+F  G +   +LS G+ 
Sbjct: 193 CKKLDSGQXXFRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKH 252
Query: 568 P 568
           P
Sbjct: 253 P 253

>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In Complex With The Bisindoylmaleide Inhibitor Bim Viii Length = 412

Iteration: 1
 Score = 48.1 bits (113), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 30/87 (34%), Positives = 44/87 (50%), Gaps = 9/87 (10%)
Query: 490 LHRDIKSSNVLLDKEMNGRLGDFG-LARMHGHGQVASTTRVVGTVGYLAPEVFSS----- 543
           +HRDIK  N+LLD+  + RL DFG   ++   G V S    VGT  YL+PE+  +     
Sbjct: 184 VHRDIKPDNILLDRCGHIRLADFGSCLKLRADGTVRSLV-AVGTPDYLSPEILQAVGGGP 242
Query: 544 --GRASTQTDVFGFGILILEVLSGRRP 568
             G    + D +  G+   E+  G+ P
Sbjct: 243 GTGSYGPECDWWALGVFAYEMFYGQTP 269

>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With 3-Indolyl-4- Arylmaleimide Inhibitor Length = 391

Iteration: 1
 Score = 48.1 bits (113), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 51/205 (24%), Positives = 90/205 (43%), Gaps = 18/205 (8%)
Query: 385 LEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWC-----KREKGSLML 439
           L   G  +A+K++  +     R    E+  + +L H ++V LR +      K+++  L L
Sbjct: 46  LCDSGELVAIKKVLQDKRFKNR----ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNL 101
Query: 440 VYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNV 499
           V DY+                 L        +  +   + Y+H      + HRDIK  N+
Sbjct: 102 VLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG---ICHRDIKPQNL 158
Query: 500 LLDKEMNG-RLGDFGLARMHGHGQVASTTRVVGTVGYLAPE-VFSSGRASTQTDVFGFGI 557
           LLD +    +L DFG A+    G+       + +  Y APE +F +   ++  DV+  G 
Sbjct: 159 LLDPDTAVLKLCDFGSAKQLVRGE--PNVSYICSRYYRAPELIFGATDYTSSIDVWSAGC 216
Query: 558 LILEVLSGRR--PIEEGKPNLVEMV 580
           ++ E+L G+   P + G   LVE++
Sbjct: 217 VLAELLLGQPIFPGDSGVDQLVEII 241

>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In Complexed With Inhibitor Length = 414

Iteration: 1
 Score = 48.1 bits (113), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 51/205 (24%), Positives = 90/205 (43%), Gaps = 18/205 (8%)
Query: 385 LEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWC-----KREKGSLML 439
           L   G  +A+K++  +     R    E+  + +L H ++V LR +      K+++  L L
Sbjct: 69  LCDSGELVAIKKVLQDKRFKNR----ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNL 124
Query: 440 VYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNV 499
           V DY+                 L        +  +   + Y+H      + HRDIK  N+
Sbjct: 125 VLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG---ICHRDIKPQNL 181
Query: 500 LLDKEMNG-RLGDFGLARMHGHGQVASTTRVVGTVGYLAPE-VFSSGRASTQTDVFGFGI 557
           LLD +    +L DFG A+    G+       + +  Y APE +F +   ++  DV+  G 
Sbjct: 182 LLDPDTAVLKLCDFGSAKQLVRGE--PNVSYICSRYYRAPELIFGATDYTSSIDVWSAGC 239
Query: 558 LILEVLSGRR--PIEEGKPNLVEMV 580
           ++ E+L G+   P + G   LVE++
Sbjct: 240 VLAELLLGQPIFPGDSGVDQLVEII 264

>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The Kinase-Ribonuclease Domain Of Ire1 Length = 448

Iteration: 1
 Score = 48.1 bits (113), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 35/121 (28%), Positives = 58/121 (47%), Gaps = 23/121 (19%)
Query: 468 IRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLL--------DKEMNGR-----LGDFGL 514
           I +L+ +A+GV +LH     K++HRD+K  N+L+        D++         + DFGL
Sbjct: 136 ISLLRQIASGVAHLHS---LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGL 192
Query: 515 ARMHGHGQV---ASTTRVVGTVGYLAPEVF---SSGRASTQTDVFGFGILILEVLS-GRR 567
            +    GQ     +     GT G+ APE+    +  R +   D+F  G +   +LS G+ 
Sbjct: 193 CKKLDSGQXXFRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKH 252
Query: 568 P 568
           P
Sbjct: 253 P 253

>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A Imidazopyridine Inhibitor Length = 382

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 51/205 (24%), Positives = 90/205 (43%), Gaps = 18/205 (8%)
Query: 385 LEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWC-----KREKGSLML 439
           L   G  +A+K++  +     R    E+  + +L H ++V LR +      K+++  L L
Sbjct: 53  LCDSGELVAIKKVLQDKRFKNR----ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNL 108
Query: 440 VYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNV 499
           V DY+                 L        +  +   + Y+H      + HRDIK  N+
Sbjct: 109 VLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG---ICHRDIKPQNL 165
Query: 500 LLDKEMNG-RLGDFGLARMHGHGQVASTTRVVGTVGYLAPE-VFSSGRASTQTDVFGFGI 557
           LLD +    +L DFG A+    G+       + +  Y APE +F +   ++  DV+  G 
Sbjct: 166 LLDPDTAVLKLCDFGSAKQLVRGE--PNVSXICSRYYRAPELIFGATDYTSSIDVWSAGC 223
Query: 558 LILEVLSGRR--PIEEGKPNLVEMV 580
           ++ E+L G+   P + G   LVE++
Sbjct: 224 VLAELLLGQPIFPGDSGVDQLVEII 248

>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein Kinase 6 (Mapk6) Length = 320

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 52/193 (26%), Positives = 92/193 (47%), Gaps = 27/193 (13%)
Query: 392 IAVKRISHENDGGTRAFLAEISSLGRLKHKSLV------GLRGW-------CKREKGSLM 438
           +A+K+I   +    +  L EI  + RL H ++V      G  G           E  S+ 
Sbjct: 39  VAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVGSLTELNSVY 98
Query: 439 LVYDYMENGSLDKWIFQCDGSMMLSCEERIRV-LKDVAAGVLYLHEGWEKKVLHRDIKSS 497
           +V +YME   L   + Q  G ++   EE  R+ +  +  G+ Y+H      VLHRD+K +
Sbjct: 99  IVQEYMET-DLANVLEQ--GPLL---EEHARLFMYQLLRGLKYIHSA---NVLHRDLKPA 149
Query: 498 NVLLDKE-MNGRLGDFGLARMHG--HGQVASTTRVVGTVGYLAPEVFSSGRASTQT-DVF 553
           N+ ++ E +  ++GDFGLAR+    +      +  + T  Y +P +  S    T+  D++
Sbjct: 150 NLFINTEDLVLKIGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMW 209
Query: 554 GFGILILEVLSGR 566
             G +  E+L+G+
Sbjct: 210 AAGCIFAEMLTGK 222

>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g Length = 316

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 41/145 (28%), Positives = 70/145 (48%), Gaps = 29/145 (20%)
Query: 470 VLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMN---GRLGDFGLA---RMHGHGQV 523
           V++DVA+ + +LH    K + HRD+K  N+L +        ++ DFGL    +++G    
Sbjct: 116 VVQDVASALDFLHN---KGIAHRDLKPENILCEHPNQVSPVKICDFGLGSGIKLNGDCSP 172
Query: 524 ASTTRVV---GTVGYLAPEVFS--SGRAST---QTDVFGFGILILEVLSGRRPIE----- 570
            ST  ++   G+  Y+APEV    S  AS    + D++  G+++  +LSG  P       
Sbjct: 173 ISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGS 232
Query: 571 -------EGKPNLVEMVWELMVQGK 588
                  E  P    M++E + +GK
Sbjct: 233 DCGWDRGEACPACQNMLFESIQEGK 257

>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo Form) Length = 289

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 40/180 (22%), Positives = 86/180 (47%), Gaps = 10/180 (5%)
Query: 390 AEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSL 449
            E+ +K +   +   + +F    S + +L HK LV   G C     ++ LV ++++ GSL
Sbjct: 41  TEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCVCGDENI-LVQEFVKFGSL 99
Query: 450 DKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRL 509
           D ++ +      ++   ++ V K +AA + +L E     ++H ++ + N+LL +E + + 
Sbjct: 100 DTYLKK--NKNCINILWKLEVAKQLAAAMHFLEEN---TLIHGNVCAKNILLIREEDRKT 154
Query: 510 GDFGLARMHGHG---QVASTTRVVGTVGYLAPEVFSSGR-ASTQTDVFGFGILILEVLSG 565
           G+    ++   G    V     +   + ++ PE   + +  +  TD + FG  + E+ SG
Sbjct: 155 GNPPFIKLSDPGISITVLPKDILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSG 214

>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1 In With Amp-Pnp Length = 325

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 27/104 (25%), Positives = 53/104 (50%), Gaps = 7/104 (6%)
Query: 470 VLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNG---RLGDFGLARMHGHGQVAST 526
           +++ + + V ++H+     V+HRD+K  N+L   E +    ++ DFG AR+         
Sbjct: 111 IMRKLVSAVSHMHDVG---VVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLK 167
Query: 527 TRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIE 570
           T    T+ Y APE+ +        D++  G+++  +LSG+ P +
Sbjct: 168 TPCF-TLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQ 210

>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex Length = 349

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 51/205 (24%), Positives = 89/205 (43%), Gaps = 18/205 (8%)
Query: 385 LEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWC-----KREKGSLML 439
           L   G  +A+K++  +     R    E+  + +L H ++V LR +      K++   L L
Sbjct: 41  LCDSGELVAIKKVLQDKRFKNR----ELQIMRKLDHCNIVRLRYFFYSSGEKKDVVYLNL 96
Query: 440 VYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNV 499
           V DY+                 L        +  +   + Y+H      + HRDIK  N+
Sbjct: 97  VLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG---ICHRDIKPQNL 153
Query: 500 LLDKEMNG-RLGDFGLARMHGHGQVASTTRVVGTVGYLAPE-VFSSGRASTQTDVFGFGI 557
           LLD +    +L DFG A+    G+       + +  Y APE +F +   ++  DV+  G 
Sbjct: 154 LLDPDTAVLKLCDFGSAKQLVRGE--PNVSXICSRYYRAPELIFGATDYTSSIDVWSAGC 211
Query: 558 LILEVLSGRR--PIEEGKPNLVEMV 580
           ++ E+L G+   P + G   LVE++
Sbjct: 212 VLAELLLGQPIFPGDSGVDQLVEII 236

>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta (Gsk3b) In Complex With Inhibitor 142 Length = 430

Iteration: 1
 Score = 47.4 bits (111), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 51/205 (24%), Positives = 90/205 (43%), Gaps = 18/205 (8%)
Query: 385 LEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWC-----KREKGSLML 439
           L   G  +A+K++  +     R    E+  + +L H ++V LR +      K+++  L L
Sbjct: 75  LCDSGELVAIKKVLQDKRFKNR----ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNL 130
Query: 440 VYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNV 499
           V DY+                 L        +  +   + Y+H      + HRDIK  N+
Sbjct: 131 VLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG---ICHRDIKPQNL 187
Query: 500 LLDKEMNG-RLGDFGLARMHGHGQVASTTRVVGTVGYLAPE-VFSSGRASTQTDVFGFGI 557
           LLD +    +L DFG A+    G+       + +  Y APE +F +   ++  DV+  G 
Sbjct: 188 LLDPDTAVLKLCDFGSAKQLVRGE--PNVSXICSRYYRAPELIFGATDYTSSIDVWSAGC 245
Query: 558 LILEVLSGRR--PIEEGKPNLVEMV 580
           ++ E+L G+   P + G   LVE++
Sbjct: 246 VLAELLLGQPIFPGDSGVDQLVEII 270

>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b) Length = 420

Iteration: 1
 Score = 47.4 bits (111), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 51/205 (24%), Positives = 90/205 (43%), Gaps = 18/205 (8%)
Query: 385 LEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWC-----KREKGSLML 439
           L   G  +A+K++  +     R    E+  + +L H ++V LR +      K+++  L L
Sbjct: 75  LCDSGELVAIKKVLQDKRFKNR----ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNL 130
Query: 440 VYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNV 499
           V DY+                 L        +  +   + Y+H      + HRDIK  N+
Sbjct: 131 VLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG---ICHRDIKPQNL 187
Query: 500 LLDKEMNG-RLGDFGLARMHGHGQVASTTRVVGTVGYLAPE-VFSSGRASTQTDVFGFGI 557
           LLD +    +L DFG A+    G+       + +  Y APE +F +   ++  DV+  G 
Sbjct: 188 LLDPDTAVLKLCDFGSAKQLVRGE--PNVSYICSRYYRAPELIFGATDYTSSIDVWSAGC 245
Query: 558 LILEVLSGRR--PIEEGKPNLVEMV 580
           ++ E+L G+   P + G   LVE++
Sbjct: 246 VLAELLLGQPIFPGDSGVDQLVEII 270

>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase 2 Length = 400

Iteration: 1
 Score = 47.4 bits (111), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 39/139 (28%), Positives = 60/139 (43%), Gaps = 11/139 (7%)
Query: 434 KGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRD 493
           +  L++V + ++ G L   I Q  G    +  E   + K +   + YLH      + HRD
Sbjct: 131 RKCLLIVXECLDGGELFSRI-QDRGDQAFTEREASEIXKSIGEAIQYLHSI---NIAHRD 186
Query: 494 IKSSNVL-LDKEMNG--RLGDFGLAR-MHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQ 549
           +K  N+L   K  N   +L DFG A+    H    S T    T  Y+APEV    +    
Sbjct: 187 VKPENLLYTSKRPNAILKLTDFGFAKETTSHN---SLTTPCYTPYYVAPEVLGPEKYDKS 243
Query: 550 TDVFGFGILILEVLSGRRP 568
            D +  G++   +L G  P
Sbjct: 244 CDXWSLGVIXYILLCGYPP 262

>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei, Pb000659.00.0 Length = 432

Iteration: 1
 Score = 47.4 bits (111), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 48/200 (24%), Positives = 90/200 (45%), Gaps = 33/200 (16%)
Query: 392 IAVKRISH--ENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYD--YMENG 447
           +A+K+++   E+    +  L EI+ L RLK   ++ L      +    +L +D  Y+   
Sbjct: 54  VAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDD---LLKFDELYIVLE 110
Query: 448 SLDKWIFQCDGSMMLSCEERIR-VLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMN 506
             D  + +   + +   EE I+ +L ++  G  ++HE     ++HRD+K +N LL+++ +
Sbjct: 111 IADSDLKKLFKTPIFLTEEHIKTILYNLLLGENFIHESG---IIHRDLKPANCLLNQDCS 167
Query: 507 GRLGDFGLARM---------------------HGHGQVASTTRVVGTVGYLAPEVFSSGR 545
            ++ DFGLAR                      H        T  V T  Y APE+     
Sbjct: 168 VKVCDFGLARTINSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQE 227
Query: 546 ASTQT-DVFGFGILILEVLS 564
             T++ D++  G +  E+L+
Sbjct: 228 NYTKSIDIWSTGCIFAELLN 247

>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp Length = 422

Iteration: 1
 Score = 47.4 bits (111), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 51/205 (24%), Positives = 90/205 (43%), Gaps = 18/205 (8%)
Query: 385 LEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWC-----KREKGSLML 439
           L   G  +A+K++  +     R    E+  + +L H ++V LR +      K+++  L L
Sbjct: 77  LCDSGELVAIKKVLQDKRFKNR----ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNL 132
Query: 440 VYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNV 499
           V DY+                 L        +  +   + Y+H      + HRDIK  N+
Sbjct: 133 VLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG---ICHRDIKPQNL 189
Query: 500 LLDKEMNG-RLGDFGLARMHGHGQVASTTRVVGTVGYLAPE-VFSSGRASTQTDVFGFGI 557
           LLD +    +L DFG A+    G+       + +  Y APE +F +   ++  DV+  G 
Sbjct: 190 LLDPDTAVLKLCDFGSAKQLVRGE--PNVSYICSRYYRAPELIFGATDYTSSIDVWSAGC 247
Query: 558 LILEVLSGRR--PIEEGKPNLVEMV 580
           ++ E+L G+   P + G   LVE++
Sbjct: 248 VLAELLLGQPIFPGDSGVDQLVEII 272

>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16 In Complex With Staurosporine Length = 317

Iteration: 1
 Score = 47.4 bits (111), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 53/195 (27%), Positives = 89/195 (45%), Gaps = 22/195 (11%)
Query: 393 AVKRI-SHENDGGTRAFLAEISSLGRL-KHKSLVGLRGWCKREKGS---LMLVYDYMENG 447
           A+KRI  HE      A     + + RL  H +++ L  +C RE+G+     L+  + + G
Sbjct: 58  ALKRILCHEQQDREEA--QREADMHRLFNHPNILRLVAYCLRERGAKHEAWLLLPFFKRG 115
Query: 448 SLDKWIFQC-DGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMN 506
           +L   I +  D    L+ ++ + +L  +  G+  +H    K   HRD+K +N+LL  E  
Sbjct: 116 TLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHA---KGYAHRDLKPTNILLGDEGQ 172
Query: 507 GRLGDFG---LARMHGHGQVASTT-----RVVGTVGYLAPEVFSSGRAST---QTDVFGF 555
             L D G    A +H  G   + T         T+ Y APE+FS         +TDV+  
Sbjct: 173 PVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSL 232
Query: 556 GILILEVLSGRRPIE 570
           G ++  ++ G  P +
Sbjct: 233 GCVLYAMMFGEGPYD 247

>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma Length = 367

Iteration: 1
 Score = 47.4 bits (111), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 32/104 (30%), Positives = 57/104 (54%), Gaps = 9/104 (8%)
Query: 465 EERIRVL-KDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQV 523
           E+RI+ L   +  G+ Y+H      ++HRD+K  N+ ++++   ++ DFGLAR       
Sbjct: 127 EDRIQFLVYQMLKGLRYIHAA---GIIHRDLKPGNLAVNEDCELKILDFGLARQAD---- 179
Query: 524 ASTTRVVGTVGYLAPEVFSSGRASTQT-DVFGFGILILEVLSGR 566
           +     V T  Y APEV  +    TQT D++  G ++ E+++G+
Sbjct: 180 SEMXGXVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGK 223

>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine Length = 424

Iteration: 1
 Score = 47.0 bits (110), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 51/205 (24%), Positives = 90/205 (43%), Gaps = 18/205 (8%)
Query: 385 LEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWC-----KREKGSLML 439
           L   G  +A+K++  +     R    E+  + +L H ++V LR +      K+++  L L
Sbjct: 79  LCDSGELVAIKKVLQDKRFKNR----ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNL 134
Query: 440 VYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNV 499
           V DY+                 L        +  +   + Y+H      + HRDIK  N+
Sbjct: 135 VLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG---ICHRDIKPQNL 191
Query: 500 LLDKEMNG-RLGDFGLARMHGHGQVASTTRVVGTVGYLAPE-VFSSGRASTQTDVFGFGI 557
           LLD +    +L DFG A+    G+       + +  Y APE +F +   ++  DV+  G 
Sbjct: 192 LLDPDTAVLKLCDFGSAKQLVRGE--PNVSYICSRYYRAPELIFGATDYTSSIDVWSAGC 249
Query: 558 LILEVLSGRR--PIEEGKPNLVEMV 580
           ++ E+L G+   P + G   LVE++
Sbjct: 250 VLAELLLGQPIFPGDSGVDQLVEII 274

>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor Length = 465

Iteration: 1
 Score = 47.0 bits (110), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 51/205 (24%), Positives = 90/205 (43%), Gaps = 18/205 (8%)
Query: 385 LEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWC-----KREKGSLML 439
           L   G  +A+K++  +     R    E+  + +L H ++V LR +      K+++  L L
Sbjct: 120 LCDSGELVAIKKVLQDKRFKNR----ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNL 175
Query: 440 VYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNV 499
           V DY+                 L        +  +   + Y+H      + HRDIK  N+
Sbjct: 176 VLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG---ICHRDIKPQNL 232
Query: 500 LLDKEMNG-RLGDFGLARMHGHGQVASTTRVVGTVGYLAPE-VFSSGRASTQTDVFGFGI 557
           LLD +    +L DFG A+    G+       + +  Y APE +F +   ++  DV+  G 
Sbjct: 233 LLDPDTAVLKLCDFGSAKQLVRGE--PNVSYICSRYYRAPELIFGATDYTSSIDVWSAGC 290
Query: 558 LILEVLSGRR--PIEEGKPNLVEMV 580
           ++ E+L G+   P + G   LVE++
Sbjct: 291 VLAELLLGQPIFPGDSGVDQLVEII 315

>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta. Length = 352

Iteration: 1
 Score = 47.0 bits (110), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 51/205 (24%), Positives = 89/205 (43%), Gaps = 18/205 (8%)
Query: 385 LEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWC-----KREKGSLML 439
           L   G  +A+K++        R    E+  + +L H ++V LR +      K+++  L L
Sbjct: 41  LCDSGELVAIKKVLQGKAFKNR----ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNL 96
Query: 440 VYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNV 499
           V DY+                 L        +  +   + Y+H      + HRDIK  N+
Sbjct: 97  VLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG---ICHRDIKPQNL 153
Query: 500 LLDKEMNG-RLGDFGLARMHGHGQVASTTRVVGTVGYLAPE-VFSSGRASTQTDVFGFGI 557
           LLD +    +L DFG A+    G+       + +  Y APE +F +   ++  DV+  G 
Sbjct: 154 LLDPDTAVLKLCDFGSAKQLVRGE--PNVSYICSRYYRAPELIFGATDYTSSIDVWSAGC 211
Query: 558 LILEVLSGRR--PIEEGKPNLVEMV 580
           ++ E+L G+   P + G   LVE++
Sbjct: 212 VLAELLLGQPIFPGDSGVDQLVEII 236

>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin Length = 434

Iteration: 1
 Score = 47.0 bits (110), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 35/125 (28%), Positives = 57/125 (45%), Gaps = 27/125 (21%)
Query: 468 IRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLL--------DKEMNGR-----LGDFGL 514
           I +L+ +A+GV +LH     K++HRD+K  N+L+        D++         + DFGL
Sbjct: 118 ISLLRQIASGVAHLHS---LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGL 174
Query: 515 ARMHGHGQV---ASTTRVVGTVGYLAPEVFSSG-------RASTQTDVFGFGILILEVLS 564
            +    GQ     +     GT G+ APE+           R +   D+F  G +   +LS
Sbjct: 175 CKKLDSGQXXFRXNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILS 234
Query: 565 -GRRP 568
            G+ P
Sbjct: 235 KGKHP 239

>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex With Gold Length = 362

Iteration: 1
 Score = 46.6 bits (109), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 49/165 (29%), Positives = 72/165 (43%), Gaps = 14/165 (8%)
Query: 411 EISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRV 470
           EI +   L+H ++V  +         L +V +Y   G L + I  C+       E R   
Sbjct: 65  EIINHRSLRHPNIVRFKEVI-LTPTHLAIVMEYASGGELFERI--CNAGRFSEDEARF-F 120
Query: 471 LKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRL--GDFGLARMHG-HGQVASTT 527
            + + +GV Y H     +V HRD+K  N LLD     RL    FG ++    H Q   T 
Sbjct: 121 FQQLISGVSYCHA---MQVCHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQPKDT- 176
Query: 528 RVVGTVGYLAPEVFSSGRASTQ-TDVFGFGILILEVLSGRRPIEE 571
             VGT  Y+APEV        +  DV+  G+ +  +L G  P E+
Sbjct: 177 --VGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFED 219

>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik) Length = 356

Iteration: 1
 Score = 46.6 bits (109), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 51/186 (27%), Positives = 87/186 (46%), Gaps = 19/186 (10%)
Query: 389 GAEIAVKRISHENDGGTRAFLAE-ISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENG 447
           G + AVK++  E       F AE + +   L    +V L G   RE   + +  + +E G
Sbjct: 99  GFQCAVKKVRLE------VFRAEELMACAGLTSPRIVPLYG-AVREGPWVNIFMELLEGG 151
Query: 448 SLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKE-MN 506
           SL + + +      L  +  +  L     G+ YLH    +++LH D+K+ NVLL  +  +
Sbjct: 152 SLGQLVKE---QGCLPEDRALYYLGQALEGLEYLHS---RRILHGDVKADNVLLSSDGSH 205
Query: 507 GRLGDFGLA---RMHGHGQ-VASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEV 562
             L DFG A   +  G G+ + +   + GT  ++APEV        + DV+    ++L +
Sbjct: 206 AALCDFGHAVCLQPDGLGKDLLTGDYIPGTETHMAPEVVLGRSCDAKVDVWSSCCMMLHM 265
Query: 563 LSGRRP 568
           L+G  P
Sbjct: 266 LNGCHP 271

>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With 6-Bromoindirubin-3'-Oxime Length = 350

Iteration: 1
 Score = 46.6 bits (109), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 51/205 (24%), Positives = 89/205 (43%), Gaps = 18/205 (8%)
Query: 385 LEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWC-----KREKGSLML 439
           L   G  +A+K++        R    E+  + +L H ++V LR +      K+++  L L
Sbjct: 41  LCDSGELVAIKKVLQGKAFKNR----ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNL 96
Query: 440 VYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNV 499
           V DY+                 L        +  +   + Y+H      + HRDIK  N+
Sbjct: 97  VLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG---ICHRDIKPQNL 153
Query: 500 LLDKEMNG-RLGDFGLARMHGHGQVASTTRVVGTVGYLAPE-VFSSGRASTQTDVFGFGI 557
           LLD +    +L DFG A+    G+       + +  Y APE +F +   ++  DV+  G 
Sbjct: 154 LLDPDTAVLKLCDFGSAKQLVRGE--PNVSYICSRYYRAPELIFGATDYTSSIDVWSAGC 211
Query: 558 LILEVLSGRR--PIEEGKPNLVEMV 580
           ++ E+L G+   P + G   LVE++
Sbjct: 212 VLAELLLGQPIFPGDSGVDQLVEII 236

>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase (nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3) Length = 350

Iteration: 1
 Score = 46.6 bits (109), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 54/187 (28%), Positives = 87/187 (46%), Gaps = 21/187 (11%)
Query: 389 GAEIAVKRISHENDGGTRAF-LAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENG 447
           G + AVK++  E       F + E+ +   L    +V L G   RE   + +  + +E G
Sbjct: 97  GFQCAVKKVRLE------VFRVEELVACAGLSSPRIVPLYG-AVREGPWVNIFMELLEGG 149
Query: 448 SLDKWIFQCDGSMMLSCEER-IRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKE-M 505
           SL + I Q    M    E+R +  L     G+ YLH    +++LH D+K+ NVLL  +  
Sbjct: 150 SLGQLIKQ----MGCLPEDRALYYLGQALEGLEYLHT---RRILHGDVKADNVLLSSDGS 202
Query: 506 NGRLGDFGLA---RMHGHGQVASTTRVV-GTVGYLAPEVFSSGRASTQTDVFGFGILILE 561
              L DFG A   +  G G+   T   + GT  ++APEV        + D++    ++L 
Sbjct: 203 RAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLH 262
Query: 562 VLSGRRP 568
           +L+G  P
Sbjct: 263 MLNGCHP 269

>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma Gondii, Tgme49_018720 Length = 285

Iteration: 1
 Score = 46.6 bits (109), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 40/163 (24%), Positives = 76/163 (46%), Gaps = 11/163 (6%)
Query: 410 AEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERI- 468
           AEI  L  L H +++ +    + +  ++ +V +  E G L + I           E  + 
Sbjct: 69  AEIEVLKSLDHPNIIKIFEVFE-DYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVA 127
Query: 469 RVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNG---RLGDFGLARMHGHGQVAS 525
            ++K +   + Y H    + V+H+D+K  N+L          ++ DFGLA +    +   
Sbjct: 128 ELMKQMMNALAYFHS---QHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDE--H 182
Query: 526 TTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRP 568
           +T   GT  Y+APEVF     + + D++  G+++  +L+G  P
Sbjct: 183 STNAAGTALYMAPEVFKRD-VTFKCDIWSAGVVMYFLLTGCLP 224

>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase (nik) Bound To A 2-(aminothiazoly)phenol (cmp2) Length = 336

Iteration: 1
 Score = 46.6 bits (109), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 43/143 (30%), Positives = 69/143 (48%), Gaps = 13/143 (9%)
Query: 432 REKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEER-IRVLKDVAAGVLYLHEGWEKKVL 490
           RE   + +  + +E GSL + I Q    M    E+R +  L     G+ YLH    +++L
Sbjct: 120 REGPWVNIFMELLEGGSLGQLIKQ----MGCLPEDRALYYLGQALEGLEYLHT---RRIL 172
Query: 491 HRDIKSSNVLLDKE-MNGRLGDFGLA---RMHGHGQVASTTRVV-GTVGYLAPEVFSSGR 545
           H D+K+ NVLL  +     L DFG A   +  G G+   T   + GT  ++APEV     
Sbjct: 173 HGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKP 232
Query: 546 ASTQTDVFGFGILILEVLSGRRP 568
              + D++    ++L +L+G  P
Sbjct: 233 CDAKVDIWSSCCMMLHMLNGCHP 255

>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik) Length = 371

Iteration: 1
 Score = 46.6 bits (109), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 51/186 (27%), Positives = 87/186 (46%), Gaps = 19/186 (10%)
Query: 389 GAEIAVKRISHENDGGTRAFLAE-ISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENG 447
           G + AVK++  E       F AE + +   L    +V L G   RE   + +  + +E G
Sbjct: 118 GFQCAVKKVRLE------VFRAEELMACAGLTSPRIVPLYG-AVREGPWVNIFMELLEGG 170
Query: 448 SLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKE-MN 506
           SL + + +      L  +  +  L     G+ YLH    +++LH D+K+ NVLL  +  +
Sbjct: 171 SLGQLVKE---QGCLPEDRALYYLGQALEGLEYLHS---RRILHGDVKADNVLLSSDGSH 224
Query: 507 GRLGDFGLA---RMHGHGQ-VASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEV 562
             L DFG A   +  G G+ + +   + GT  ++APEV        + DV+    ++L +
Sbjct: 225 AALCDFGHAVCLQPDGLGKSLLTGDYIPGTETHMAPEVVLGRSCDAKVDVWSSCCMMLHM 284
Query: 563 LSGRRP 568
           L+G  P
Sbjct: 285 LNGCHP 290

>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1 Length = 290

Iteration: 1
 Score = 46.6 bits (109), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 43/174 (24%), Positives = 77/174 (44%), Gaps = 20/174 (11%)
Query: 408 FLAEISSLGRLKHKSLVGL-RGWCKREKG--SLMLVYDYMENGSLDKWIFQCDGSMMLSC 464
           F  E   L  L+H ++V     W    KG   ++LV +   +G+L  ++ +         
Sbjct: 72  FKEEAEXLKGLQHPNIVRFYDSWESTVKGKKCIVLVTELXTSGTLKTYLKRFKVX----- 126
Query: 465 EERIRVLK----DVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNG-RLGDFGLARMHG 519
             +I+VL+     +  G+ +LH      ++HRD+K  N+ +       ++GD GLA +  
Sbjct: 127 --KIKVLRSWCRQILKGLQFLH-TRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLK- 182
Query: 520 HGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGK 573
             + +    V+GT  + APE +   +     DV+ FG   LE  +   P  E +
Sbjct: 183 --RASFAKAVIGTPEFXAPEXYEE-KYDESVDVYAFGXCXLEXATSEYPYSECQ 233

>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase (nik) Length = 352

Iteration: 1
 Score = 46.6 bits (109), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 43/143 (30%), Positives = 69/143 (48%), Gaps = 13/143 (9%)
Query: 432 REKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEER-IRVLKDVAAGVLYLHEGWEKKVL 490
           RE   + +  + +E GSL + I Q    M    E+R +  L     G+ YLH    +++L
Sbjct: 136 REGPWVNIFMELLEGGSLGQLIKQ----MGCLPEDRALYYLGQALEGLEYLHT---RRIL 188
Query: 491 HRDIKSSNVLLDKE-MNGRLGDFGLA---RMHGHGQVASTTRVV-GTVGYLAPEVFSSGR 545
           H D+K+ NVLL  +     L DFG A   +  G G+   T   + GT  ++APEV     
Sbjct: 189 HGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKP 248
Query: 546 ASTQTDVFGFGILILEVLSGRRP 568
              + D++    ++L +L+G  P
Sbjct: 249 CDAKVDIWSSCCMMLHMLNGCHP 271

>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147 Length = 429

Iteration: 1
 Score = 46.6 bits (109), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 46/209 (22%), Positives = 89/209 (42%), Gaps = 36/209 (17%)
Query: 386 EGGGAEIAVKRISH--ENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYD- 442
           +     +A+K+++   E+    +  L EI+ L RLK   ++ L      E    +L +D 
Sbjct: 50  KNANKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLHDLIIPED---LLKFDE 106
Query: 443 -YMENGSLDKWIFQCDGSMMLSCEERIR-VLKDVAAGVLYLHEGWEKKVLHRDIKSSNVL 500
            Y+     D  + +   + +   E+ ++ +L ++  G  ++HE     ++HRD+K +N L
Sbjct: 107 LYIVLEIADSDLKKLFKTPIFLTEQHVKTILYNLLLGEKFIHESG---IIHRDLKPANCL 163
Query: 501 LDKEMNGRLGDFGLARM------------------------HGHGQVASTTRVVGTVGYL 536
           L+++ + ++ DFGLAR                         H        T  V T  Y 
Sbjct: 164 LNQDCSVKICDFGLARTINSDKDIHIVNDLEEKEENEEPGPHNKNLKKQLTSHVVTRWYR 223
Query: 537 APE-VFSSGRASTQTDVFGFGILILEVLS 564
           APE +      +   D++  G +  E+L+
Sbjct: 224 APELILLQENYTNSIDIWSTGCIFAELLN 252

>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin Peptide Length = 350

Iteration: 1
 Score = 46.2 bits (108), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 51/205 (24%), Positives = 89/205 (43%), Gaps = 18/205 (8%)
Query: 385 LEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWC-----KREKGSLML 439
           L   G  +A+K++        R    E+  + +L H ++V LR +      K+++  L L
Sbjct: 41  LCDSGELVAIKKVLQGKAFKNR----ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNL 96
Query: 440 VYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNV 499
           V DY+                 L        +  +   + Y+H      + HRDIK  N+
Sbjct: 97  VLDYVPATVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG---ICHRDIKPQNL 153
Query: 500 LLDKEMNG-RLGDFGLARMHGHGQVASTTRVVGTVGYLAPE-VFSSGRASTQTDVFGFGI 557
           LLD +    +L DFG A+    G+       + +  Y APE +F +   ++  DV+  G 
Sbjct: 154 LLDPDTAVLKLCDFGSAKQLVRGE--PNVSXICSRYYRAPELIFGATDYTSSIDVWSAGC 211
Query: 558 LILEVLSGRR--PIEEGKPNLVEMV 580
           ++ E+L G+   P + G   LVE++
Sbjct: 212 VLAELLLGQPIFPGDSGVDQLVEII 236

>pdb|1QMO|E Chain E, Structure Of Fril, A Legume Lectin That Delays Hematopoietic Progenitor Maturation Length = 133

Iteration: 1
 Score = 46.2 bits (108), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 40/147 (27%), Positives = 64/147 (43%), Gaps = 34/147 (23%)
Query: 136 HVFGVEFDVFKNQEFNDIDENHVGIDVNSLTSVSAHAAGYWPDNQXXXXXXXXXXXXXXX 195
           +V  VEFD + N ++ D +  H+GIDVNS+ S                            
Sbjct: 2   NVVAVEFDTYLNPDYGDPNYIHIGIDVNSIRS---------------------------- 33
Query: 196 EKSFKELKLNNGKNYQVWIDY--ADSFINITMVEAGMKRPKRPLLSVPLNLSGVLEDEMY 253
            K   +    NGK     I Y      +++T   AG    K   LS  + L  VL + + 
Sbjct: 34  -KVTAKWDWQNGKIATAHISYNSVSKRLSVTSYYAG---SKPATLSYDIELHTVLPEWVR 89
Query: 254 VGFTAATGQLVESHKILAWSFSNTKFS 280
           VG +A+TGQ  E + + +WSF+++ ++
Sbjct: 90  VGLSASTGQDKERNTVHSWSFTSSLWT 116

>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain Length = 307

Iteration: 1
 Score = 46.2 bits (108), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 49/195 (25%), Positives = 94/195 (48%), Gaps = 22/195 (11%)
Query: 389 GAEIAVKRISHENDGGTRAFLAEISSLGRLK-HKSLVGLRGWCKREKGSLMLVYDYMENG 447
           G E AVK I  +          E+ +L + + +K+++ L  + + +     LV++ ++ G
Sbjct: 38  GKEYAVKIIEKQAGHSRSRVFREVETLYQCQGNKNILELIEFFE-DDTRFYLVFEKLQGG 96
Query: 448 SLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLL---DKE 504
           S+   +         +  E  RV++DVAA + +LH    K + HRD+K  N+L    +K 
Sbjct: 97  SI---LAHIQKQKHFNEREASRVVRDVAAALDFLH---TKGIAHRDLKPENILCESPEKV 150
Query: 505 MNGRLGDFGLA---RMHGHGQVAST---TRVVGTVGYLAPEVFS--SGRAS---TQTDVF 553
              ++ DF L    +++      +T   T   G+  Y+APEV    + +A+    + D++
Sbjct: 151 SPVKICDFDLGSGMKLNNSCTPITTPELTTPCGSAEYMAPEVVEVFTDQATFYDKRCDLW 210
Query: 554 GFGILILEVLSGRRP 568
             G+++  +LSG  P
Sbjct: 211 SLGVVLYIMLSGYPP 225

>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With Sb203580 Length = 362

Iteration: 1
 Score = 45.8 bits (107), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 48/195 (24%), Positives = 87/195 (44%), Gaps = 18/195 (9%)
Query: 385 LEGGGAEIAVKRISHE-NDGGT----------RAFLAEISSLGRLKHKSLVGLRG-WCKR 432
           ++  G  +A+KR+ +  +DG T          +  L EI  L    H +++GLR  +   
Sbjct: 42  VDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNILGLRDIFVHF 101
Query: 433 EKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHR 492
           E+ ++  +Y   E    D      D  +++S +     +  +  G+  LHE     V+HR
Sbjct: 102 EEPAMHKLYLVTELMRTDLAQVIHDQRIVISPQHIQYFMYHILLGLHVLHEA---GVVHR 158
Query: 493 DIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQ-TD 551
           D+   N+LL    +  + DF LAR       A+ T  V    Y APE+    +  T+  D
Sbjct: 159 DLHPGNILLADNNDITICDFNLAREDTAD--ANKTHYVTHRWYRAPELVMQFKGFTKLVD 216
Query: 552 VFGFGILILEVLSGR 566
           ++  G ++ E+ + +
Sbjct: 217 MWSAGCVMAEMFNRK 231

>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs Resolution) Length = 362

Iteration: 1
 Score = 45.8 bits (107), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 48/195 (24%), Positives = 87/195 (44%), Gaps = 18/195 (9%)
Query: 385 LEGGGAEIAVKRISHE-NDGGT----------RAFLAEISSLGRLKHKSLVGLRG-WCKR 432
           ++  G  +A+KR+ +  +DG T          +  L EI  L    H +++GLR  +   
Sbjct: 42  VDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNILGLRDIFVHF 101
Query: 433 EKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHR 492
           E+ ++  +Y   E    D      D  +++S +     +  +  G+  LHE     V+HR
Sbjct: 102 EEPAMHKLYLVTELMRTDLAQVIHDQRIVISPQHIQYFMYHILLGLHVLHEA---GVVHR 158
Query: 493 DIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQ-TD 551
           D+   N+LL    +  + DF LAR       A+ T  V    Y APE+    +  T+  D
Sbjct: 159 DLHPGNILLADNNDITICDFNLAREDTAD--ANKTHYVTHRWYRAPELVMQFKGFTKLVD 216
Query: 552 VFGFGILILEVLSGR 566
           ++  G ++ E+ + +
Sbjct: 217 MWSAGCVMAEMFNRK 231

>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain Length = 316

Iteration: 1
 Score = 45.4 bits (106), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 40/145 (27%), Positives = 69/145 (47%), Gaps = 29/145 (20%)
Query: 470 VLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMN---GRLGDFGLA---RMHGHGQV 523
           V++DVA+ + +LH    K + HRD+K  N+L +        ++ DF L    +++G    
Sbjct: 116 VVQDVASALDFLHN---KGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSP 172
Query: 524 ASTTRVV---GTVGYLAPEVFS--SGRAST---QTDVFGFGILILEVLSGRRPIE----- 570
            ST  ++   G+  Y+APEV    S  AS    + D++  G+++  +LSG  P       
Sbjct: 173 ISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGS 232
Query: 571 -------EGKPNLVEMVWELMVQGK 588
                  E  P    M++E + +GK
Sbjct: 233 DCGWDRGEACPACQNMLFESIQEGK 257

>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide Length = 361

Iteration: 1
 Score = 45.4 bits (106), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 44/191 (23%), Positives = 80/191 (41%), Gaps = 44/191 (23%)
Query: 429 WCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKK 488
           +C R+   +++   Y+E+ S        D    LS +E    + ++   +  +H+     
Sbjct: 87  YCFRKNDHVVIAMPYLEHESF------LDILNSLSFQEVREYMLNLFKALKRIHQFG--- 137
Query: 489 VLHRDIKSSNVLLDKEMNG-RLGDFGLAR------------------------------M 517
           ++HRD+K SN L ++ +    L DFGLA+                              +
Sbjct: 138 IVHRDVKPSNFLYNRRLKKYALVDFGLAQGTHDTKIELLKFVQSEAQQERCSQNKCSICL 197
Query: 518 HGHGQVASTTRVVGTVGYLAPEVFSSG-RASTQTDVFGFGILILEVLSGRRPIEEGKPNL 576
               QVA      GT G+ APEV +     +T  D++  G++ L +LSGR P  +   +L
Sbjct: 198 SRRQQVAPR---AGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYPFYKASDDL 254
Query: 577 VEMVWELMVQG 587
             +   + ++G
Sbjct: 255 TALAQIMTIRG 265
  Database: pdbaa

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	705
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	1e-115
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	1e-104
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	1e-101
3soc_A	322	Activin receptor type-2A; structural genomics cons	2e-70
3ipv_A	251	Lectin alpha chain; galactose binding, SEED lectin	2e-58
1g7y_A	253	Stem/LEAF lectin DB58; jelly roll fold, sugar bind	7e-58
1fat_A	252	Phytohemagglutinin-L; glycoprotein, plant defense	4e-57
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	7e-57
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	9e-57
1v6i_A	232	Agglutinin, PNA, galactose-binding lectin; open qu	2e-56
2fmd_A	240	Lectin, agglutinin, BMA; legume lectin, beta sandw	2e-56
1hql_A	257	Lectin; xenograft antigen, sugar BI protein; HET:	4e-56
3zyr_A	261	Lectin; sugar binding protein, N-glycan; HET: NAG	5e-56
2eig_A	234	Lectin; L-fucosyl, N-acetyl-D-glucosamine, SUG bin	8e-56
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	2e-55
1gsl_A	243	Griffonia simplicifolia lectin 4; glycoprotein, ma	1e-54
1dbn_A	239	MAL, protein (leukoagglutinin); plant lectin, carb	1e-54
1fny_A	237	BARK lectin, BARK agglutinin I,polypeptide A; legu	1e-54
1fx5_A	242	UEA-I, UE-I, anti-H(O) lectin I; legume lectin, HO	2e-54
2bqp_A	234	Protein (PEA lectin); D-glucopyranose complex, sug	3e-54
1avb_A	226	Arcelin-1; lectin-like glycoprotein, plant defense	9e-54
1sbf_A	253	Soybean agglutinin; lectin; HET: NAG GAL; 2.43A {G	1e-53
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	8e-53
1gzc_A	239	Erythrina crista-galli lectin; carbohydrate, sugar	2e-52
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	3e-52
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	3e-52
1wbf_A	242	Protein (agglutinin); lectin (agglutinin), legume	1e-51
1qnw_A	242	Chitin binding lectin, UEA-II; carbohydrate bindin	2e-51
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	5e-50
1n47_A	233	Isolectin B4; cancer antigen, vicia villosa lectin	1e-49
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	3e-49
1dhk_B	223	Bean lectin-like inhibitor, porcine pancreatic alp	9e-49
1ioa_A	240	Arcelin-5A, ARC5A; lectin-like proteins, plant def	4e-48
3q4u_A	301	Activin receptor type-1; structural genomics conso	4e-48
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	7e-48
1f9k_A	238	Acidic lectin; legume lectin, glycosylated protein	1e-47
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	3e-46
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	5e-46
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	1e-45
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	6e-45
2ltn_A	181	PEA lectin, alpha chain; 1.70A {Pisum sativum} SCO	3e-41
2a19_B	284	Interferon-induced, double-stranded RNA-activated	4e-38
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	6e-37
4apc_A	350	Serine/threonine-protein kinase NEK1; transferase;	2e-36
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	7e-36
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	2e-34
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	5e-34
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	6e-34
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	9e-34
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	1e-33
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	5e-33
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	5e-33
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	9e-33
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	2e-32
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	4e-32
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	5e-32
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	6e-32
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	7e-32
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	9e-32
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	1e-31
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	1e-31
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	2e-31
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	2e-31
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	3e-31
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	4e-31
1qmo_E	133	Mannose binding lectin, FRIL; crosslink, hematopoi	6e-31
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	7e-31
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	7e-31
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	8e-31
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	9e-31
3pls_A	298	Macrophage-stimulating protein receptor; protein k	1e-30
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	2e-30
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	2e-30
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	3e-30
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	4e-30
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	4e-30
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	5e-30
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	5e-30
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	5e-30
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	5e-30
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	6e-30
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	6e-30
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	9e-30
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	1e-29
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	2e-29
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	2e-29
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	2e-29
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	3e-29
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	3e-29
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	4e-29
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	4e-29
1nls_A	237	Concanavalin A; lectin, agglutinin; 0.94A {Canaval	4e-29
1nls_A	237	Concanavalin A; lectin, agglutinin; 0.94A {Canaval	3e-12
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	5e-29
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	2e-28
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	2e-28
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	7e-28
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	1e-27
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	1e-27
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	1e-27
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	1e-27
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	3e-27
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	3e-27
4aoj_A	329	High affinity nerve growth factor receptor; transf	4e-27
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	9e-27
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	1e-26
3o0g_A	292	Cell division protein kinase 5; kinase activator c	3e-26
3zzw_A	289	Tyrosine-protein kinase transmembrane receptor RO;	4e-26
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	4e-26
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	7e-26
3aln_A	327	Dual specificity mitogen-activated protein kinase;	1e-25
3v5q_A	297	NT-3 growth factor receptor; kinase domain, kinase	2e-25
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	2e-25
2dyl_A	318	Dual specificity mitogen-activated protein kinase	3e-25
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	5e-25
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	7e-25
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	7e-25
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	7e-25
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	7e-25
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	8e-25
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	9e-25
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	9e-25
3ork_A	311	Serine/threonine protein kinase; structural genomi	9e-25
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	1e-24
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	1e-24
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	1e-24
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	2e-24
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	2e-24
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	2e-24
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	3e-24
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	3e-24
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	3e-24
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	3e-24
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	3e-24
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	4e-24
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	4e-24
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	4e-24
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	4e-24
3niz_A	311	Rhodanese family protein; structural genomics, str	4e-24
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	6e-24
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	9e-24
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	9e-24
3fme_A	290	Dual specificity mitogen-activated protein kinase;	9e-24
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	9e-24
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	1e-23
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	1e-23
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	1e-23
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	1e-23
3an0_A	340	Dual specificity mitogen-activated protein kinase;	1e-23
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	1e-23
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	1e-23
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	1e-23
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	1e-23
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	2e-23
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	2e-23
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	4e-23
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	4e-23
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	5e-23
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	7e-23
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	9e-23
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	9e-23
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	1e-22
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	1e-22
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	1e-22
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	2e-22
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	2e-22
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	2e-22
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	2e-22
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	3e-22
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	3e-22
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	4e-22
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	4e-22
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	4e-22
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	5e-22
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	5e-22
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	5e-22
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	9e-22
1qmo_A	113	Mannose binding lectin, FRIL; crosslink, hematopoi	1e-21
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	1e-21
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	2e-21
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	2e-21
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	2e-21
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	2e-21
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	3e-21
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	4e-21
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	4e-21
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	4e-21
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	5e-21
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	5e-21
3pvu_A	695	Beta-adrenergic receptor kinase 1; transferase, se	8e-21
3bhy_A	283	Death-associated protein kinase 3; death associate	9e-21
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	1e-20
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	1e-20
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	2e-20
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	2e-20
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	2e-20
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	4e-20
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	6e-20
1uu3_A	310	HPDK1, 3-phosphoinositide dependent protein kinase	5e-19
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	7e-19
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	7e-19
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	1e-18
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	2e-18
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	4e-18
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	6e-18
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	9e-18
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	4e-17
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	4e-17
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	6e-17
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	2e-16
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	4e-16
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	5e-16
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	5e-16
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	1e-15
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	1e-15
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	2e-15
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	2e-15
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	2e-15
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	2e-15
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	3e-15
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	3e-15
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	3e-15
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	6e-15
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	7e-15
3uqc_A	286	Probable conserved transmembrane protein; structur	8e-15
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	9e-15
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	2e-14
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	2e-14
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	2e-14
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	3e-14
3g51_A	325	Ribosomal protein S6 kinase alpha-3; N-terminal ki	3e-14
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	3e-14
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	4e-14
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	8e-06
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	8e-14
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	8e-14
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	9e-14
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	1e-13
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	2e-13
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	2e-13
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	4e-13
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	5e-13
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	5e-13
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	8e-13
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	3e-12
1gv9_A	260	P58/ergic-53; lectin, carbohydrate binding; 1.46A	3e-12
3rp9_A	458	Mitogen-activated protein kinase; structural genom	7e-12
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	2e-11
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	3e-11
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	4e-11
2dur_A	253	VIP36;, vesicular integral-membrane protein VIP36;	8e-11
2ltn_B	52	PEA lectin, beta chain; 1.70A {Pisum sativum} SCOP	8e-11
2vuw_A	336	Serine/threonine-protein kinase haspin; cell cycle	4e-07
2izr_A	330	Casein kinase I isoform gamma-3; serine/threonine-	2e-06
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	4e-06
2v62_A	345	Serine/threonine-protein kinase VRK2; transferase,	8e-06
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	8e-06
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	5e-05
1csn_A	298	Casein kinase-1; phosphotransferase; HET: ATP; 2.0	1e-05
3uzp_A	296	CKI-delta, CKID, casein kinase I isoform delta; CK	1e-05
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	2e-05
3sv0_A	483	Casein kinase I-like; typical kinase domain fold,	1e-04
3op5_A	364	Serine/threonine-protein kinase VRK1; adenosine tr	2e-04
2jii_A	352	Serine/threonine-protein kinase VRK3 molecule: VA	2e-04

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3tl8_A* Length = 326

 Score =  348 bits (895), Expect = e-115
 Identities = 114/319 (35%), Positives = 187/319 (58%), Gaps = 13/319 (4%)

Query: 343 EDWELEY-WPHRITYQEIEAATKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHEN 401
           ED E+      R + +E++ A+  FS +N++G GG GKVYKG L  G   +AVKR+  E 
Sbjct: 8   EDPEVHLGQLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADG-TLVAVKRLKEER 66

Query: 402 D-GGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIF-QCDGS 459
             GG   F  E+  +    H++L+ LRG+C       +LVY YM NGS+   +  + +  
Sbjct: 67  TQGGELQFQTEVEMISMAVHRNLLRLRGFC-MTPTERLLVYPYMANGSVASCLRERPESQ 125

Query: 460 MMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHG 519
             L   +R R+    A G+ YLH+  + K++HRD+K++N+LLD+E    +GDFGLA++  
Sbjct: 126 PPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMD 185

Query: 520 HGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKP----- 574
           +     TT V GT+G++APE  S+G++S +TDVFG+G+++LE+++G+R  +  +      
Sbjct: 186 YKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDD 245

Query: 575 -NLVEMVWELMVQGKLLDALDARLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVV 633
             L++ V  L+ + KL   +D  L  +G + ++EVE+++ + LLC    P  RP M +VV
Sbjct: 246 VMLLDWVKGLLKEKKLEALVDVDL--QGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVV 303

Query: 634 KVLEGKIEAGIENETEDMD 652
           ++LEG   A    E +  +
Sbjct: 304 RMLEGDGLAERWEEWQKEE 322

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A* Length = 307

 Score =  319 bits (819), Expect = e-104
 Identities = 91/302 (30%), Positives = 157/302 (51%), Gaps = 24/302 (7%)

Query: 351 PHRITYQEIEAATKGFSEE------NVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDG- 403
            H  ++ E++  T  F E       N +G GG G VYKG +      +AVK+++   D  
Sbjct: 12  FHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNT--TVAVKKLAAMVDIT 69

Query: 404 ---GTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSM 460
                + F  EI  + + +H++LV L G+   +   L LVY YM NGSL   +   DG+ 
Sbjct: 70  TEELKQQFDQEIKVMAKCQHENLVELLGFS-SDGDDLCLVYVYMPNGSLLDRLSCLDGTP 128

Query: 461 MLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGH 520
            LS   R ++ +  A G+ +LHE      +HRDIKS+N+LLD+    ++ DFGLAR    
Sbjct: 129 PLSWHMRCKIAQGAANGINFLHE---NHHIHRDIKSANILLDEAFTAKISDFGLARASEK 185

Query: 521 GQV-ASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKP--NLV 577
                 T+R+VGT  Y+APE    G  + ++D++ FG+++LE+++G   ++E +    L+
Sbjct: 186 FAQTVMTSRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLL 244

Query: 578 EMVWELMVQGKLLDAL-DARLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVL 636
           ++  E+  + K ++   D ++      D   VE +  +   C +     RP +++V ++L
Sbjct: 245 DIKEEIEDEEKTIEDYIDKKM---NDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLL 301

Query: 637 EG 638
           + 
Sbjct: 302 QE 303

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A* Length = 321

 Score =  312 bits (803), Expect = e-101
 Identities = 100/307 (32%), Positives = 162/307 (52%), Gaps = 17/307 (5%)

Query: 343 EDWELEYWPHRITYQEIEAATKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHEND 402
             + + +  +R+   ++E AT  F  + +IG G  GKVYKGVL  G A++A+KR + E+ 
Sbjct: 18  SSYLVPFESYRVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDG-AKVALKRRTPESS 76

Query: 403 GGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDG-SMM 461
            G   F  EI +L   +H  LV L G+C  E+  ++L+Y YMENG+L + ++  D  +M 
Sbjct: 77  QGIEEFETEIETLSFCRHPHLVSLIGFCD-ERNEMILIYKYMENGNLKRHLYGSDLPTMS 135

Query: 462 LSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARM---H 518
           +S E+R+ +    A G+ YLH      ++HRD+KS N+LLD+    ++ DFG+++     
Sbjct: 136 MSWEQRLEICIGAARGLHYLHTR---AIIHRDVKSINILLDENFVPKITDFGISKKGTEL 192

Query: 519 GHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKP---- 574
               +  +T V GT+GY+ PE F  GR + ++DV+ FG+++ EVL  R  I +  P    
Sbjct: 193 DQTHL--STVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMV 250

Query: 575 NLVEMVWELMVQGKLLDALDARLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVK 634
           NL E   E    G+L   +D  L        + + +     + C       RP+M  V+ 
Sbjct: 251 NLAEWAVESHNNGQLEQIVDPNL--ADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLW 308

Query: 635 VLEGKIE 641
            LE  + 
Sbjct: 309 KLEYALR 315

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 2qlu_A* Length = 322

 Score =  231 bits (591), Expect = 2e-70
 Identities = 71/308 (23%), Positives = 122/308 (39%), Gaps = 31/308 (10%)

Query: 354 ITYQEIEAATKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAEIS 413
           +  + +   +       V   G  G V+K  L      +AVK    ++    +    E+ 
Sbjct: 14  LGTENLYFQSMPLQLLEVKARGRFGCVWKAQLLNE--YVAVKIFPIQDKQSWQ-NEYEVY 70

Query: 414 SLGRLKHKSLVGLRGWCKREKGS---LMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRV 470
           SL  +KH++++   G  KR       L L+  + E GSL  ++       ++S  E   +
Sbjct: 71  SLPGMKHENILQFIGAEKRGTSVDVDLWLITAFHEKGSLSDFLKAN----VVSWNELCHI 126

Query: 471 LKDVAAGVLYLHE-------GWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQ- 522
            + +A G+ YLHE       G +  + HRDIKS NVLL   +   + DFGLA     G+ 
Sbjct: 127 AETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKS 186

Query: 523 VASTTRVVGTVGYLAPEVFSSG-----RASTQTDVFGFGILILEVLSGRRPI----EEGK 573
              T   VGT  Y+APEV          A  + D++  G+++ E+ S         +E  
Sbjct: 187 AGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYM 246

Query: 574 PNLVEMVWELMVQGKLLDALD---ARLRAKGGFDEDEVERVL-HLGLLCAYPDPRARPTM 629
               E + +      + + +     R   +  + +     +L      C   D  AR + 
Sbjct: 247 LPFEEEIGQHPSLEDMQEVVVHKKKRPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSA 306

Query: 630 RQVVKVLE 637
             V + + 
Sbjct: 307 GCVGERIT 314

>3ipv_A Lectin alpha chain; galactose binding, SEED lectin, hemagglutinin, legume lectin fungal, sugar binding protein; 2.04A {Spatholobus parviflorus} PDB: 3ipv_B 3usu_B* 3usu_A* Length = 251

 Score =  197 bits (501), Expect = 2e-58
 Identities = 71/266 (26%), Positives = 107/266 (40%), Gaps = 43/266 (16%)

Query: 24  SAVDFVFNGF--NSSNLSLYGTATVES-RILTLTNST------TFTIGRALYPSKIPTKR 74
               FVF+ F     NL L G A V    +L LTN          ++GRA Y + I    
Sbjct: 2   EETSFVFSKFKPLEPNLILQGDALVTVAGVLQLTNVDKNGVPEPSSLGRATYSAPINIWD 61

Query: 75  PNSSYVYPFSTSFIFAMAPYKGVLAGHGLVFLFVPFHGIKGATEAQHLGLFNRTNDGNSS 134
             +  V  F+TSF F +          GL F   P      +     LGLF+    G++ 
Sbjct: 62  SATGLVASFATSFRFTIYAPNIATIADGLAFFLAPVASAPDSG-GGFLGLFDSAVSGST- 119

Query: 135 NHVFGVEFDVFKNQEFNDIDENHVGIDVNSLTSVSAHAAGYWPDNQTDSSGSNSNSGTGD 194
                VEFD ++N  F D    H+G DVNS++S+                          
Sbjct: 120 YQTVAVEFDTYENTVFTDPPYTHIGFDVNSISSIKTV----------------------- 156

Query: 195 DEKSFKELKLNNGKNYQVWIDYADSFINITMVEAGMKRPKRPLLSVPLNLSGVLEDEMYV 254
                 +  L NG+  +V I Y  +   +             +L+  ++LS VL + + V
Sbjct: 157 ------KWSLANGEAAKVLITYNSAVKLLVASLVYPSSKTSFILADIVDLSSVLPEWVRV 210

Query: 255 GFTAATGQ---LVESHKILAWSFSNT 277
           GF+AATG     +E+H + +WSF++ 
Sbjct: 211 GFSAATGASGGKIETHDVFSWSFASK 236

>1g7y_A Stem/LEAF lectin DB58; jelly roll fold, sugar binding protein; HET: NAG FUC FUL; 2.50A {Vigna unguiculata subsp} SCOP: b.29.1.1 PDB: 1lul_A 1lu1_A* 1bjq_A* 1lu2_A* Length = 253

 Score =  195 bits (497), Expect = 7e-58
 Identities = 73/283 (25%), Positives = 118/283 (41%), Gaps = 42/283 (14%)

Query: 24  SAVDFVFNGFNSSNLSLYGTATVESRILTLTNS------TTFTIGRALYPSKIPTKRPNS 77
               F F  FNSS+  L G ATV S  L LT        T  ++GRA Y S I     ++
Sbjct: 2   DIQSFSFKNFNSSSFILQGDATVSSSKLRLTKVKGNGLPTLSSLGRAFYSSPIQIYDKST 61

Query: 78  SYVYPFSTSFIFAMAPYKGVLAGHGLVFLFVPFHGIKGATEAQHLGLFNRTNDGNSSNHV 137
             V  ++TSF   +       +  G+ F  VP  G +  + +  LG+F+     NS    
Sbjct: 62  GAVASWATSFTANIFAPNKSSSADGIAFALVP-VGSEPKSNSGFLGVFDSDVYDNS-AQT 119

Query: 138 FGVEFDVFKNQEFNDIDENHVGIDVNSLTSVSAHAAGYWPDNQTDSSGSNSNSGTGDDEK 197
             VEFD F N ++ D    H+GIDVNS+ S+   +                         
Sbjct: 120 VAVEFDTFSNTDW-DPTSRHIGIDVNSIKSIRTASW------------------------ 154

Query: 198 SFKELKLNNGKNYQVWIDYADSFINITMVEAGMKRPKRPLLSVPLNLSGVLEDEMYVGFT 257
                 L NG+N ++ I Y  +   +        R    ++S  ++++  L + + +GF+
Sbjct: 155 -----GLANGQNAEILITYNAATSLLVASLVHPSRRTSYIVSERVDITNELPEYVSIGFS 209

Query: 258 AATG---QLVESHKILAWSFSNTKFSLSEELITSGLPSFVLPK 297
           A TG      E+H +L+WSF+ +K           + S+++  
Sbjct: 210 ATTGLSEGYTETHDVLSWSFA-SKLPDDSTTEPLDIASYLVRN 251

>1fat_A Phytohemagglutinin-L; glycoprotein, plant defense protein, lectin; HET: NAG; 2.80A {Phaseolus vulgaris} SCOP: b.29.1.1 PDB: 1g8w_A* Length = 252

 Score =  193 bits (492), Expect = 4e-57
 Identities = 79/284 (27%), Positives = 117/284 (41%), Gaps = 45/284 (15%)

Query: 24  SAVDFVFNGFNSSNLSLYGTATVESR-ILTLTNST------TFTIGRALYPSKIPTKRPN 76
           + + F F  FN +NL L   A+V S   L LTN          ++GRA Y + I      
Sbjct: 2   NDIYFNFQRFNETNLILQRDASVSSSGQLRLTNLNGNGEPRVGSLGRAFYSAPIQIWDNT 61

Query: 77  SSYVYPFSTSFIFAMAPYKGVLAGHGLVFLFVPFHGIKGATEAQHLGLFNRTNDGNSSNH 136
           +  V  F+TSF F +          GL F  VP     G+      G     +  NS+ H
Sbjct: 62  TGTVASFATSFTFNIQVPNNAGPADGLAFALVPV----GSQPKDKGGFLGLFDGSNSNFH 117

Query: 137 VFGVEFDVFKNQEFNDIDENHVGIDVNSLTSVSAHAAGYWPDNQTDSSGSNSNSGTGDDE 196
              VEFD   N+++ D  E H+GIDVNS+ S+      +                     
Sbjct: 118 TVAVEFDTLYNKDW-DPTERHIGIDVNSIRSIKTTRWDFV-------------------- 156

Query: 197 KSFKELKLNNGKNYQVWIDYADSFINITMVEAGMKRPKRPLLSVPLNLSGVLEDEMYVGF 256
                    NG+N +V I Y  S   +        +    ++S  ++L  VL + + VGF
Sbjct: 157 ---------NGENAEVLITYDSSTNLLVASLVYPSQKTSFIVSDTVDLKSVLPEWVSVGF 207

Query: 257 TAATG---QLVESHKILAWSFSNTKFSLSEELITSGLPSFVLPK 297
           +A TG     VE++ +L+WSF+ +K S         L + VL K
Sbjct: 208 SATTGINKGNVETNDVLSWSFA-SKLSDETTSEGLNLANLVLNK 250

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* Length = 309

 Score =  194 bits (496), Expect = 7e-57
 Identities = 71/310 (22%), Positives = 142/310 (45%), Gaps = 34/310 (10%)

Query: 330 KRKQRRAREREEMEDWELEYWPHRITYQEIEAATKGFSEENVIGVGGNGKVYKGVLEGGG 389
             +    +   + +D +       I + ++         +  IG G  G V++    G  
Sbjct: 17  TTENLYFQGAMDGDDMD-------IPWCDLN-------IKEKIGAGSFGTVHRAEWHG-- 60

Query: 390 AEIAVKRI--SHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENG 447
           +++AVK +     +      FL E++ + RL+H ++V   G   +   +L +V +Y+  G
Sbjct: 61  SDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQP-PNLSIVTEYLSRG 119

Query: 448 SLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNG 507
           SL + + +      L    R+ +  DVA G+ YLH      ++HR++KS N+L+DK+   
Sbjct: 120 SLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLH-NRNPPIVHRNLKSPNLLVDKKYTV 178

Query: 508 RLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRR 567
           ++ DFGL+R+     + S+    GT  ++APEV     ++ ++DV+ FG+++ E+ + ++
Sbjct: 179 KVCDFGLSRLKASTFL-SSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQ 237

Query: 568 PIEEGKPNLVEMVWELMVQGKLLDALDARLRAKGGFDEDEVERVLHLGLLCAYPDPRARP 627
           P     P   ++V  +  + K       RL      +      V  +   C   +P  RP
Sbjct: 238 PWGNLNP--AQVVAAVGFKCK-------RLEIPRNLNPQ----VAAIIEGCWTNEPWKRP 284

Query: 628 TMRQVVKVLE 637
           +   ++ +L 
Sbjct: 285 SFATIMDLLR 294

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} Length = 336

 Score =  195 bits (497), Expect = 9e-57
 Identities = 70/333 (21%), Positives = 120/333 (36%), Gaps = 47/333 (14%)

Query: 354 ITYQEIEAATKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAE-- 411
               E            +IG G  G VYKG L      +AVK  S  N    + F+ E  
Sbjct: 3   AAASEPSLDLDNLKLLELIGRGRYGAVYKGSL--DERPVAVKVFSFANR---QNFINEKN 57

Query: 412 ISSLGRLKHKSLVGLRGWCKREKGS----LMLVYDYMENGSLDKWIFQCDGSMMLSCEER 467
           I  +  ++H ++       +R         +LV +Y  NGSL K++              
Sbjct: 58  IYRVPLMEHDNIARFIVGDERVTADGRMEYLLVMEYYPNGSLXKYLSL----HTSDWVSS 113

Query: 468 IRVLKDVAAGVLYLHE------GWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHG 521
            R+   V  G+ YLH        ++  + HRD+ S NVL+  +    + DFGL+      
Sbjct: 114 CRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGN 173

Query: 522 QVA-------STTRVVGTVGYLAPEVFSS-------GRASTQTDVFGFGILILEVLSGRR 567
           ++        +    VGT+ Y+APEV            A  Q D++  G++  E+     
Sbjct: 174 RLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCT 233

Query: 568 PIEEGKP-NLVEMVWELMVQG--------KLLDALDARLRAKGGFDEDEVERVLHLGLL- 617
            +  G+     +M ++  V           L+     R +    + E+ +        + 
Sbjct: 234 DLFPGESVPEYQMAFQTEVGNHPTFEDMQVLVSREKQRPKFPEAWKENSLAVRSLKETIE 293

Query: 618 -CAYPDPRARPTMRQVVKVLEGKIEAGIENETE 649
            C   D  AR T +   + +  ++    E    
Sbjct: 294 DCWDQDAEARLTAQXAEERMA-ELMMIWERNKS 325

>1v6i_A Agglutinin, PNA, galactose-binding lectin; open quaternary association, orthorhombic, carbohydrate specificity, protein crystallography; HET: GAL GLC; 2.15A {Arachis hypogaea} SCOP: b.29.1.1 PDB: 1bzw_A* 1v6j_A* 1v6k_A* 1v6l_A* 1v6m_A 1v6n_A 1v6o_A 2dva_A* 1cq9_A 1ciw_A* 1qf3_A* 1rir_A* 1rit_A* 2dh1_A 1cr7_A* 2dv9_A* 2dvb_A* 2dvd_A* 2dvf_A 2dvg_A* ... Length = 232

 Score =  191 bits (486), Expect = 2e-56
 Identities = 67/259 (25%), Positives = 101/259 (38%), Gaps = 37/259 (14%)

Query: 24  SAVDFVFNGFNSSN--LSLYGTATVESR-ILTLTN-STTFTIGRALYPSKIPTKRPNSSY 79
             V F FN F+  N  ++  G  TV S   + LTN +   ++GR LY   +      +  
Sbjct: 2   ETVSFNFNSFSEGNPAINFQGDVTVLSNGNIQLTNLNKVNSVGRVLYAMPVRIWSSATGN 61

Query: 80  VYPFSTSFIFAMAPYKGVLAGHGLVFLFVPFHGIKGATEAQHLGLFNRTNDGNSSNHVFG 139
           V  F TSF F M   K      G++F   P    +    +   G     +D   + H  G
Sbjct: 62  VASFLTSFSFEMKDIKDYDPADGIIFFIAP-EDTQIPAGSIGGGTLG-VSDTKGAGHFVG 119

Query: 140 VEFDVFKNQEFNDIDENHVGIDVNSLTSVSAHAAGYWPDNQTDSSGSNSNSGTGDDEKSF 199
           VEFD + N E+ND   +HVGIDVNS+ SV                               
Sbjct: 120 VEFDTYSNSEYNDPPTDHVGIDVNSVDSVKTV---------------------------- 151

Query: 200 KELKLNNGKNYQVWIDYADSFINITMVEAGMKRPKRPLLSVPLNLSGVLEDEMYVGFTAA 259
                 +G   +V + Y DS      V           ++  ++L   L + +  GF+A+
Sbjct: 152 -PWNSVSGAVVKVTVIY-DSSTKTLSVAVTNDNGDITTIAQVVDLKAKLPERVKFGFSAS 209

Query: 260 TGQL-VESHKILAWSFSNT 277
                 + H I +WSF++T
Sbjct: 210 GSLGGRQIHLIRSWSFTST 228

>2fmd_A Lectin, agglutinin, BMA; legume lectin, beta sandwich, protein-carbohydrate complex, sugar binding protein; HET: MAN; 1.90A {Bowringia mildbraedii} Length = 240

 Score =  191 bits (485), Expect = 2e-56
 Identities = 75/263 (28%), Positives = 117/263 (44%), Gaps = 40/263 (15%)

Query: 24  SAVDFVFNGFNSS--NLSLYGTATVES-RILTLT------NSTTFTIGRALYPSKIPTKR 74
           ++V F F  F S   +L   G A+V S + L LT      N    ++GRALY + I   +
Sbjct: 2   NSVCFTFTDFESGQQDLIFQGDASVGSNKALQLTKVDSKGNPQGGSVGRALYTAPIRLWQ 61

Query: 75  PNSSYVYPFSTSFIFAMAPYKGVLAGHGLVFLFVPFHGIKGATEAQHLGLFNRTNDGNSS 134
            +S  V  F T+F F+++      A     F+  P   I   +  + LGLF  +N+  S 
Sbjct: 62  SSSL-VASFETTFTFSISQGSSTPADALTFFIASPDTKIPSGSGGRLLGLFGSSNNAGSD 120

Query: 135 NHVFGVEFDVFKNQEFNDIDENHVGIDVNSLTSVSAHAAGYWPDNQTDSSGSNSNSGTGD 194
           N V  VEFD + N +  D +  H+GIDVNS+ S +A    +                   
Sbjct: 121 NGVVSVEFDTYPNTDIGDPNYRHIGIDVNSIRSKAASKWDW------------------- 161

Query: 195 DEKSFKELKLNNGKNYQVWIDYADSFINITMVEAGMKRPKRPLLSVPLNLSGVLEDEMYV 254
                      NGK     I Y  +   ++ V +        ++S  + L+ V  B + V
Sbjct: 162 ----------QNGKTATAHISYNSASKRLS-VVSSYPNSSPVVVSFDVELNNVBPBWVRV 210

Query: 255 GFTAATGQLVESHKILAWSFSNT 277
           GF+A TGQ  +++ ILAWSF ++
Sbjct: 211 GFSATTGQYTQTNNILAWSFRSS 233

>1hql_A Lectin; xenograft antigen, sugar BI protein; HET: GLA MBG NAG; 2.20A {Griffonia simplicifolia} SCOP: b.29.1.1 PDB: 1gnz_A* Length = 257

 Score =  191 bits (485), Expect = 4e-56
 Identities = 68/285 (23%), Positives = 108/285 (37%), Gaps = 44/285 (15%)

Query: 24  SAVDFVFNGFNSS---NLSLYGTATVESRILTLTNST------TFTIGRALYPSKIPTKR 74
            +V F F  F S    ++   G A   +  L L  +        ++ GRALY   +    
Sbjct: 3   DSVSFTFPNFWSDVEDSIIFQGDANTTAGTLQLCKTNQYGTPLQWSAGRALYSDPVQLWD 62

Query: 75  PNSSYVYPFSTSFIFAMAPYKGVLAGHGLVFLFVPFHGIKGATEAQHLGLFNRTNDGNSS 134
             +  V  F T F F +    G     GL F   P          ++LGLFN++     S
Sbjct: 63  NKTESVASFYTEFTFFLKIT-GNGPADGLAFFLAP-PDSDVKDAGEYLGLFNKSTATQPS 120

Query: 135 -NHVFGVEFDVFKNQEFNDIDENHVGIDVNSLTSVSAHAAGYWPDNQTDSSGSNSNSGTG 193
            N V  VEFD + N  F +    H+GI+VNS+ SV+                        
Sbjct: 121 KNQVVAVEFDTWTNPNFPEPSYRHIGINVNSIVSVATK---------------------- 158

Query: 194 DDEKSFKELKLNNGKNYQVWIDYADSFINITMVEAGMKRPKRPLLSVPLNLSGVLEDEMY 253
                +++  + +GK     I Y D    I  V          +LS  +++   L + + 
Sbjct: 159 ----RWEDSDIFSGKIATARISY-DGSAEILTVVLSYPDGSDYILSHSVDMRQNLPESVR 213

Query: 254 VGFTAATGQL-VESHKILAWSFSNTKFSLSEELITSGLPSFVLPK 297
           VG +A+TG     +  IL+W FS+     S  +  +  P   + +
Sbjct: 214 VGISASTGNNQFLTVYILSWRFSSN--LQSTSVKAAMEPE--ITR 254

>3zyr_A Lectin; sugar binding protein, N-glycan; HET: NAG BMA MAN GOL; 1.65A {Platypodium elegans} PDB: 3zvx_A* 1ukg_A* 1q8o_A* 1q8q_A* 1q8s_A* 1q8v_A* 1q8p_A* 2auy_A* 2gme_A 2gmm_A* 2gmp_A* 2gn3_A* 2gn7_A* 2gnb_A* 2gnd_A* 2gnm_A* 2gnt_A 2phf_A* 2phr_A* 2pht_A* ... Length = 261

 Score =  191 bits (485), Expect = 5e-56
 Identities = 75/278 (26%), Positives = 117/278 (42%), Gaps = 45/278 (16%)

Query: 12  LLLSIFLSFESISAVDFVFNGFN--SSNLSLYGTATV-ESRILTLTNSTT------FTIG 62
           +LL+   S +S+S   F F  F+    NL   G A    + IL LT + +       T+G
Sbjct: 1   MLLNRANSTDSLS---FSFINFDRDERNLIFQGDAHTSRNNILQLTRTDSNGAPVRSTVG 57

Query: 63  RALYPSKIPTKRPNSSYVYPFSTSFIFAMAPYKGVLAGHGLVFLFVPFHGIKGATEAQHL 122
           R L+ +++     +++ V    T F F ++      A     F+  P   I   +    L
Sbjct: 58  RILHSAQVRLWEKSTNRVANLQTQFSFFLSSPLSNPADGIAFFIAPPDTTIPSGSAGGLL 117

Query: 123 GLFNRTNDGN-SSNHVFGVEFDVFKNQ--EFNDIDENHVGIDVNSLTSVSAHAAGYWPDN 179
           GLFN     N S+N V  VEFD F  Q     D +  H+GIDVNS+ S        W   
Sbjct: 118 GLFNPRTALNESANQVLAVEFDTFFAQNSNTWDPNYQHIGIDVNSIRS---SKVVRWE-- 172

Query: 180 QTDSSGSNSNSGTGDDEKSFKELKLNNGKNYQVWIDYADSFINITMVEAGMKRPKRPLLS 239
                                      GK   V + Y +       V A     +R  LS
Sbjct: 173 ------------------------RREGKTLNVLVTY-NPSTRTIDVVATYPDGQRYQLS 207

Query: 240 VPLNLSGVLEDEMYVGFTAATGQLVESHKILAWSFSNT 277
             ++L+ +L + + VGF+AA+G+  ++H + +WSF++T
Sbjct: 208 HVVDLTTILPEWVRVGFSAASGEQFQTHNLESWSFTST 245

>2eig_A Lectin; L-fucosyl, N-acetyl-D-glucosamine, SUG binding protein; HET: NAG; 2.00A {Lotus tetragonolobus} Length = 234

 Score =  189 bits (481), Expect = 8e-56
 Identities = 64/258 (24%), Positives = 99/258 (38%), Gaps = 38/258 (14%)

Query: 26  VDFVFNGF-NSSNLSLYGTATVESR-ILTLTN--STTFTIGRALYPSKIPTKRPNSSYVY 81
           V F +  F +  +L   G A + +   L +        T   ALY + +P     +  V 
Sbjct: 1   VSFNYTRFKDDGSLIFQGDAKIWTDGRLAMPTDPLVNRTTSHALYATPVPIWDSATGNVA 60

Query: 82  PFSTSFIFAMAPYKGVLAGHGLVFLFVPFHGIKGATEAQHLGLFNRTNDGNSSNHVFGVE 141
            F TSF F ++  +      G+VF   P+            G    T+  NS N    VE
Sbjct: 61  SFITSFSFIVSNVQRYPPTDGVVFFLAPWG--TEIPPNSQGGYLGITDSSNSQNQFVAVE 118

Query: 142 FDVFKN-QEFNDIDENHVGIDVNSLTSVSAHAAGYWPDNQTDSSGSNSNSGTGDDEKSFK 200
           FD   N  +   +  +H+GIDVNS+ S+ A                              
Sbjct: 119 FDSHPNVWDPKSLRSSHIGIDVNSIMSLKAVN---------------------------- 150

Query: 201 ELKLNNGKNYQVWIDYADSFINITMVEAGMKRPKRPLLSVPLNLSGVLEDEMYVGFTAAT 260
                +G   +  I Y DS   I  V    +  +   +S  ++L  VL +++ VGF+A T
Sbjct: 151 -WNRVSGSLEKATIIY-DSDTKILTVVMTHQNGQITTISQEIDLKTVLPEKVSVGFSATT 208

Query: 261 -GQLVESHKILAWSFSNT 277
                E H I +WSF++T
Sbjct: 209 WNPERERHDIYSWSFTST 226

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} Length = 307

 Score =  191 bits (486), Expect = 2e-55
 Identities = 81/313 (25%), Positives = 134/313 (42%), Gaps = 32/313 (10%)

Query: 354 ITYQEIEAATKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAEIS 413
           I Y+EIE        E V+G G  G V K        ++A+K+I  E++   +AF+ E+ 
Sbjct: 5   IDYKEIE-------VEEVVGRGAFGVVCKAKWRA--KDVAIKQIESESE--RKAFIVELR 53

Query: 414 SLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKD 473
            L R+ H ++V L G C      + LV +Y E GSL   +   +     +    +     
Sbjct: 54  QLSRVNHPNIVKLYGACLN---PVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQ 110

Query: 474 VAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMN-GRLGDFGLARMHGHGQVASTTRVVGT 532
            + GV YLH    K ++HRD+K  N+LL       ++ DFG A           T   G+
Sbjct: 111 CSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACD----IQTHMTNNKGS 166

Query: 533 VGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDA 592
             ++APEVF     S + DVF +GI++ EV++ R+P +E       ++W   V       
Sbjct: 167 AAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMW--AVHNGT--- 221

Query: 593 LDARLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLEGKIEAGIENETEDMD 652
              R        ++  + +  L   C   DP  RP+M ++VK++   +        E + 
Sbjct: 222 ---RPP----LIKNLPKPIESLMTRCWSKDPSQRPSMEEIVKIMT-HLMRYFPGADEPLQ 273

Query: 653 AYLLQQVKSKDMW 665
                 +   +  
Sbjct: 274 YPCQHSLPPGEDG 286

>1gsl_A Griffonia simplicifolia lectin 4; glycoprotein, manganese; HET: FUC GAL MAG NAG BMA; 2.00A {Griffonia simplicifolia} SCOP: b.29.1.1 PDB: 1lec_A* 1led_A* Length = 243

 Score =  186 bits (474), Expect = 1e-54
 Identities = 68/267 (25%), Positives = 102/267 (38%), Gaps = 44/267 (16%)

Query: 24  SAVDFVFNGF------NSSNLSLYGTATVESRILTLT------NSTTFTIGRALYPSKIP 71
           + V+F +  F      N + ++  G AT     L LT      N    + G+A Y   + 
Sbjct: 2   NTVNFTYPDFWSYSLKNGTEITFLGDATRIPGALQLTKTDANGNPVRSSAGQASYSEPVF 61

Query: 72  TKRPNSSYVYPFSTSFIFAMAPYKGVLAGHGLVFLFVPFHGIKGATEAQHLGLFNRTNDG 131
                +     F TSF F +  Y G     GL F   P            LGLF      
Sbjct: 62  LWDS-TGKAASFYTSFTFLLKNY-GAPTADGLAFFLAPV-DSSVKDYGGFLGLFRHETAA 118

Query: 132 NSS-NHVFGVEFDVFKNQEFNDIDENHVGIDVNSLTSVSAHAAGYWPDNQTDSSGSNSNS 190
           + S N V  VEFD + N+++ND    H+GIDVNS+ SV+                     
Sbjct: 119 DPSKNQVVAVEFDTWINKDWNDPPYPHIGIDVNSIVSVATT------------------- 159

Query: 191 GTGDDEKSFKELKLNNGKNYQVWIDYADSFINITMVEAGMKRPKRPLLSVPLNLSGVLED 250
                   ++             I Y D+   I  V    +  +  +LS  ++L+ VL  
Sbjct: 160 -------RWENDDAYGSSIATAHITY-DARSKILTVLLSYEHGRDYILSHVVDLAKVLPQ 211

Query: 251 EMYVGFTAATGQLVESHKILAWSFSNT 277
           ++ +GF+A  G   E   IL+W F +T
Sbjct: 212 KVRIGFSAGVG-YDEVTYILSWHFFST 237

>1dbn_A MAL, protein (leukoagglutinin); plant lectin, carbohydrate binding, sialyllactose, sugar BIN protein; HET: NAG SIA GAL BGC; 2.75A {Maackia amurensis} SCOP: b.29.1.1 Length = 239

 Score =  186 bits (473), Expect = 1e-54
 Identities = 71/267 (26%), Positives = 114/267 (42%), Gaps = 43/267 (16%)

Query: 24  SAVDFVFNGF--NSSNLSLYGTATVES-RILTLTN-----STTFTIGRALYPSKIPTKRP 75
             + F  N F  N ++L   G A+V S  +L LT         +++GRALY + +     
Sbjct: 2   DELSFTINNFVPNEADLLFQGEASVSSTGVLQLTKVENGQPQKYSVGRALYAAPVRIWGN 61

Query: 76  NSSYVYPFSTSFIFAMAPYKGVLAGHGLVFLFVPFH-GIKGATEAQHLGLFNRTNDGNSS 134
            +  V  FSTSF F +      +   GL F   P    I   + +++LGLFN +N  +SS
Sbjct: 62  TTGSVASFSTSFTFVVKAPNPDITSDGLAFYLAPPDSQIPSGSVSKYLGLFNNSN-SDSS 120

Query: 135 NHVFGVEFDVFKNQEFNDIDE--NHVGIDVNSLTSVSAHAAGYWPDNQTDSSGSNSNSGT 192
           N +  VEFD +    ++  D    H+GIDVN + S+      +        +G  +    
Sbjct: 121 NQIVAVEFDTYFAHSYDPWDPNYRHIGIDVNGIESIKTVQWDWI-------NGGVAF--- 170

Query: 193 GDDEKSFKELKLNNGKNYQVWIDYADSFINITMVEAGMKRPKRPLLSVPLNLSGVLEDEM 252
                      L   K     + Y                     ++  ++L  +L + +
Sbjct: 171 ------ATITYLAPNKTLIASLVYPS-------------NQTTFSVAASVDLKEILPEWV 211

Query: 253 YVGFTAATGQ--LVESHKILAWSFSNT 277
            VGF+AATG    VE+H +L+WSF++T
Sbjct: 212 RVGFSAATGYPTEVETHDVLSWSFTST 238

>1fny_A BARK lectin, BARK agglutinin I,polypeptide A; legume lectin, jelly roll, sugar binding protein; 1.81A {Robinia pseudoacacia} SCOP: b.29.1.1 PDB: 1fnz_A* Length = 237

 Score =  186 bits (472), Expect = 1e-54
 Identities = 67/265 (25%), Positives = 105/265 (39%), Gaps = 43/265 (16%)

Query: 24  SAVDFVFNGF--NSSNLSLYGTATVESR-ILTLTN-----STTFTIGRALYPSKIPTKRP 75
            ++ F F  F  N   L   G A V S  +L LTN      ++ ++GRALY +       
Sbjct: 2   GSLSFSFPKFAPNQPYLINQGDALVTSTGVLQLTNVVNGVPSSKSLGRALYAAPFQIWDS 61

Query: 76  NSSYVYPFSTSFIFAMAPYKGVLAGHGLVFLFVPFHGIKGATEAQHLGLFNRTNDGNSSN 135
            +  V  F TSF F +          GL F   P    +       LG+F      N SN
Sbjct: 62  TTGNVASFVTSFTFIIQAPNPATTADGLAFFLAP-VDTQPLDLGGMLGIFKDGY-FNKSN 119

Query: 136 HVFGVEFDVFKNQEFNDIDENHVGIDVNSLTSVSAHAAGYWPDNQTDSSGSNSNSGTGDD 195
            +  VEFD F N ++ D    H+GI+VNS+ S+      +                    
Sbjct: 120 QIVAVEFDTFSNGDW-DPKGRHLGINVNSIESIKTVPWNW-------------------- 158

Query: 196 EKSFKELKLNNGKNYQVWIDYADSFINITMVEAGMKRPKRPLLSVPLNLSGVLEDEMYVG 255
                     NG+   V+I Y  S  ++T            ++   +++  VL + +  G
Sbjct: 159 ---------TNGEVANVFISYEASTKSLTASLVYPSLETSFIIDAIVDVKIVLPEWVRFG 209

Query: 256 FTAATG---QLVESHKILAWSFSNT 277
           F+A TG     V+++ +L+WSF + 
Sbjct: 210 FSATTGIDKGYVQTNDVLSWSFESN 234

>1fx5_A UEA-I, UE-I, anti-H(O) lectin I; legume lectin, HOMO-dimer, fucose specific lectin, SUG binding protein; HET: NAG FUC BMA MAN; 2.20A {Ulex europaeus} SCOP: b.29.1.1 PDB: 1jxn_A* Length = 242

 Score =  186 bits (472), Expect = 2e-54
 Identities = 63/264 (23%), Positives = 98/264 (37%), Gaps = 39/264 (14%)

Query: 24  SAVDFVFNGF--NSSNLSLYGTATVES-RILTLT----NSTTFTIGRALYPSKIPTKRPN 76
             + F F  F  N  +LS  G A+V    +L L     N    T G A Y + I     N
Sbjct: 2   DDLSFKFKNFSQNGKDLSFQGNASVIETGVLQLNKVGNNLPDETGGIARYIAPIHIWNCN 61

Query: 77  SSYVYPFSTSFIFAM-APYKGVLAGHGLVFLFVPFHGIKGATEAQHLGLFNRTNDGNSSN 135
           +  +  F TSF F M        A  GL F   P           + GLFN T   +SS 
Sbjct: 62  TGELASFITSFSFFMETSANPKAATDGLTFFLAP-PDSPLRRAGGYFGLFNDTK-CDSSY 119

Query: 136 HVFGVEFDVFKNQ-EFNDIDENHVGIDVNSLTSVSAHAAGYWPDNQTDSSGSNSNSGTGD 194
               VEFD   +   F D    H+GIDVN + S++A                       +
Sbjct: 120 QTVAVEFDTIGSPVNFWDPGFPHIGIDVNCVKSINAERWNKRYGL--------------N 165

Query: 195 DEKSFKELKLNNGKNYQVWIDYADSFINITMVEAGMKRPKRPLLSVPLNLSGVLEDEMYV 254
           +  + + +   + K     + Y                     ++  ++L  +L + + V
Sbjct: 166 NVANVEIIYEASSKTLTASLTYPSD-------------QTSISVTSIVDLKEILPEWVSV 212

Query: 255 GFTAATGQ-LVESHKILAWSFSNT 277
           GF+ +T      +H++L W F++T
Sbjct: 213 GFSGSTYIGRQATHEVLNWYFTST 236

>2bqp_A Protein (PEA lectin); D-glucopyranose complex, sugar binding protein; HET: GLC; 1.90A {Pisum sativum} SCOP: b.29.1.1 Length = 234

 Score =  185 bits (470), Expect = 3e-54
 Identities = 68/260 (26%), Positives = 105/260 (40%), Gaps = 39/260 (15%)

Query: 26  VDFVFNGF--NSSNLSLYGTATVESRILTLTNSTTFTIGRALYPSKIPTKRPNSSYVYPF 83
             F+   F  +  NL   G        LTLT +   T+GRALY S I      +  V  F
Sbjct: 4   TSFLITKFSPDQQNLIFQGDGYTTKEKLTLTKAVKNTVGRALYSSPIHIWDRETGNVANF 63

Query: 84  STSFIFAMAPYKGVLAGHGLVFLFVPFHGIKGATEAQHLGLFNRTNDGNSSNHVFGVEFD 143
            TSF F +          G  F   P    K  T   +LG+FN     + +     VEFD
Sbjct: 64  VTSFTFVINAPNSYNVADGFTFFIAP-VDTKPQTGGGYLGVFNSAE-YDKTTQTVAVEFD 121

Query: 144 VFKNQEFNDIDE-NHVGIDVNSLTSVSAHAAGYWPDNQTDSSGSNSNSGTGDDEKSFKEL 202
            F N  ++  +   H+GIDVNS+ SV+  +                              
Sbjct: 122 TFYNAAWDPSNRDRHIGIDVNSIKSVNTKS-----------------------------W 152

Query: 203 KLNNGKNYQVWIDY--ADSFINITMVEAG---MKRPKRPLLSVPLNLSGVLEDEMYVGFT 257
           KL NG+   V I +  A + + +++        +      LS  ++L  V+ + + +GF+
Sbjct: 153 KLQNGEEANVVIAFNAATNVLTVSLTYPNNSLEEEVTSYTLSDVVSLKDVVPEWVRIGFS 212

Query: 258 AATGQLVESHKILAWSFSNT 277
           A TG    +H++L+WSF + 
Sbjct: 213 ATTGAEYAAHEVLSWSFHSE 232

>1avb_A Arcelin-1; lectin-like glycoprotein, plant defense, insecticidal activi lectin; HET: NAG; 1.90A {Phaseolus vulgaris} SCOP: b.29.1.1 Length = 226

 Score =  183 bits (466), Expect = 9e-54
 Identities = 70/261 (26%), Positives = 109/261 (41%), Gaps = 45/261 (17%)

Query: 24  SAVDFVFNGFNSSNLSLYGTATVESR-ILTLTNST---TFTIGRALYPSKIPTKRPNSSY 79
           +   F    FN +NL L G ATV S   L LTN       ++GRA Y + I         
Sbjct: 2   NDASFNVETFNKTNLILQGDATVSSEGHLLLTNVKGNEEDSMGRAFYSAPIQINDRTIDN 61

Query: 80  VYPFSTSFIFAMAPYKGVLAGHGLVFLFVPFHGIKGATEAQHLGLFNRTNDGNSSNHVFG 139
           +  FST+F F +       + +GL F  VP  G +   + ++LGLFN TN  +   H   
Sbjct: 62  LASFSTNFTFRINAKNIENSAYGLAFALVP-VGSRPKLKGRYLGLFNTTN-YDRDAHTVA 119

Query: 140 VEFDVFKNQEFNDIDENHVGIDVNSLTSVSAHAAGYWPDNQTDSSGSNSNSGTGDDEKSF 199
           V FD   N          + IDVNS+  ++  +  +                        
Sbjct: 120 VVFDTVSN---------RIEIDVNSIRPIATESCNFG----------------------- 147

Query: 200 KELKLNNGKNYQVWIDYADSFINITMVEAGMKRPKRPLLSVPLNLSGVLEDEMYVGFTAA 259
                NNG+  +V I Y     ++ +        ++  +S  + L   +ED + VGF+A 
Sbjct: 148 ----HNNGEKAEVRITYDSPKNDLRVSLLYPSSEEKCHVSATVPLEKEVEDWVSVGFSAT 203

Query: 260 TG---QLVESHKILAWSFSNT 277
           +G   +  E+H +L+WSFS+ 
Sbjct: 204 SGSKKETTETHNVLSWSFSSN 224

>1sbf_A Soybean agglutinin; lectin; HET: NAG GAL; 2.43A {Glycine max} SCOP: b.29.1.1 PDB: 1sbd_A* 1sbe_A* 1g9f_A* 2sba_A* Length = 253

 Score =  184 bits (467), Expect = 1e-53
 Identities = 76/285 (26%), Positives = 107/285 (37%), Gaps = 46/285 (16%)

Query: 24  SAVDFVFNGF--NSSNLSLYGTATVES-RILTLTNST------TFTIGRALYPSKIPTKR 74
             V F +N F     N+ L G A V S   L L            ++GRALY + I    
Sbjct: 2   ETVSFSWNKFVPKQPNMILQGDAIVTSSGKLQLNKVDENGTPKPSSLGRALYSTPIHIWD 61

Query: 75  PNSSYVYPFSTSFIFAMAPYKGVLAGHGLVFLFVPFHGIKGATEAQHLGLFNRTNDGNSS 134
             +  V  F+ SF F            GL F   P           H G     N+  S 
Sbjct: 62  KETGSVASFAASFNFTFYAPDTKRLADGLAFFLAPI----DTKPQTHAGYLGLFNENESG 117

Query: 135 NHVFGVEFDVFKNQEFNDIDENHVGIDVNSLTSVSAHAAGYWPDNQTDSSGSNSNSGTGD 194
           + V  VEFD F+N    D    H+GI+VNS+ S+                          
Sbjct: 118 DQVVAVEFDTFRNSW--DPPNPHIGINVNSIRSIKTT----------------------- 152

Query: 195 DEKSFKELKLNNGKNYQVWIDYADSFINITMVEAGMKRPKRPLLSVPLNLSGVLEDEMYV 254
                    L N K  +V I Y  S   +        +    +LS  ++L   L + + +
Sbjct: 153 ------SWDLANNKVAKVLITYDASTSLLVASLVYPSQRTSNILSDVVDLKTSLPEWVRI 206

Query: 255 GFTAATGQLV--ESHKILAWSFSNTKFSLSEELITSGLPSFVLPK 297
           GF+AATG  +  ESH +L+WSF++     S  +    L SFVL +
Sbjct: 207 GFSAATGLDIPGESHDVLSWSFASNLPHASSNIDPLDLTSFVLHE 251

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* Length = 287

 Score =  183 bits (466), Expect = 8e-53
 Identities = 67/314 (21%), Positives = 127/314 (40%), Gaps = 49/314 (15%)

Query: 338 EREEMEDWELEYWPHRITYQEIEAATKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRI 397
           E  +            +   EIE        E  IG GG G V+KG L    + +A+K +
Sbjct: 7   EFPKSRLPT-------LADNEIE-------YEKQIGKGGFGLVHKGRLVKDKSVVAIKSL 52

Query: 398 SHENDGGT-------RAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLD 450
              +  G        + F  E+  +  L H ++V L G          +V +++  G L 
Sbjct: 53  ILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNP---PRMVMEFVPCGDLY 109

Query: 451 KWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDK-----EM 505
             +        +    ++R++ D+A G+ Y+       ++HRD++S N+ L        +
Sbjct: 110 HRLLDKAHP--IKWSVKLRLMLDIALGIEYMQ-NQNPPIVHRDLRSPNIFLQSLDENAPV 166

Query: 506 NGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFS--SGRASTQTDVFGFGILILEVL 563
             ++ DFGL++   H    S + ++G   ++APE         + + D + F +++  +L
Sbjct: 167 CAKVADFGLSQQSVH----SVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTIL 222

Query: 564 SGRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRAKGGFDEDEVERVLHLGLLCAYPDP 623
           +G  P +E     ++ +  +  +G                 ED   R+ ++  LC   DP
Sbjct: 223 TGEGPFDEYSYGKIKFINMIREEGLRPT-----------IPEDCPPRLRNVIELCWSGDP 271

Query: 624 RARPTMRQVVKVLE 637
           + RP    +VK L 
Sbjct: 272 KKRPHFSYIVKELS 285

>1gzc_A Erythrina crista-galli lectin; carbohydrate, sugar binding protein, saccharide, protein-carbohydrate interactions, lactose, glycoprotein; HET: LAT; 1.58A {Erythrina crista-galli} SCOP: b.29.1.1 PDB: 1gz9_A* 1fyu_A* 1ax0_A* 1ax1_A* 1ax2_A* 1axy_A* 1axz_A* 1lte_A* 1sfy_A* 1v00_A* 1uzz_A 1uzy_A* 3n35_A* 3n36_A* 3n3h_A* Length = 239

 Score =  180 bits (457), Expect = 2e-52
 Identities = 69/268 (25%), Positives = 106/268 (39%), Gaps = 45/268 (16%)

Query: 23  ISAVDFVFNGFN--SSNLSLYGTATV-ESRILTLTNST------TFTIGRALYPSKIPTK 73
           +  + F F+ F   + NL+L G A + +S +L LT           + GR LY   +   
Sbjct: 1   VETISFSFSEFEPGNDNLTLQGAALITQSGVLQLTKINQNGMPAWDSTGRTLYTKPVHMW 60

Query: 74  RPNSSYVYPFSTSFIFAM-APYKGVLAGHGLVFLFVPFHGIKGATEAQHLGLFNRTNDGN 132
              +  V  F T F F++  PY   L   GLVF   P           +LG+FN +   N
Sbjct: 61  DSTTGTVASFETRFSFSIEQPYTRPLPADGLVFFMGPTKSKPAQG-YGYLGVFNNSKQDN 119

Query: 133 SSNHVFGVEFDVFKNQEFNDIDENHVGIDVNSLTSVSAHAAGYWPDNQTDSSGSNSNSGT 192
           S      VEFD F N  ++     H+GIDVNS+ S+                        
Sbjct: 120 S-YQTLAVEFDTFSNP-WDPPQVPHIGIDVNSIRSIKTQ--------------------- 156

Query: 193 GDDEKSFKELKLNNGKNYQVWIDYADSFINITMVEAGMKRPKRPLLSVPLNLSGVLEDEM 252
                     +L+NG+   V I Y      + +V           ++  +++  VL D +
Sbjct: 157 --------PFQLDNGQVANVVIKYDAPSKILHVVLVYPSSGAIYTIAEIVDVKQVLPDWV 208

Query: 253 YVGFTAATG---QLVESHKILAWSFSNT 277
            VG + ATG      E+H + +WSF  +
Sbjct: 209 DVGLSGATGAQRDAAETHDVYSWSFQAS 236

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} Length = 310

 Score =  182 bits (463), Expect = 3e-52
 Identities = 69/316 (21%), Positives = 123/316 (38%), Gaps = 35/316 (11%)

Query: 369 ENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRG 428
             V+G G  G+  K      G  + +K +   ++   R FL E+  +  L+H +++   G
Sbjct: 15  GEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIG 74

Query: 429 WCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKK 488
              ++   L  + +Y++ G+L   I   D        +R+   KD+A+G+ YLH      
Sbjct: 75  VLYKD-KRLNFITEYIKGGTLRGIIKSMDSQ--YPWSQRVSFAKDIASGMAYLH---SMN 128

Query: 489 VLHRDIKSSNVLLDKEMNGRLGDFGLARM-------------HGHGQVASTTRVVGTVGY 535
           ++HRD+ S N L+ +  N  + DFGLAR+                        VVG   +
Sbjct: 129 IIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYW 188

Query: 536 LAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDA 595
           +APE+ +      + DVF FGI++ E++       +  P  ++    L V+G L      
Sbjct: 189 MAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDF--GLNVRGFL------ 240

Query: 596 RLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLEGKIEAGIENETEDMDAYL 655
                             + + C   DP  RP+  ++   LE  +   +           
Sbjct: 241 DRYCPPNCPPS----FFPITVRCCDLDPEKRPSFVKLEHWLE-TLRMHLAGHLPLGPQ-- 293

Query: 656 LQQVKSKDMWANYSRS 671
             +   +  W  Y R 
Sbjct: 294 -LEQLDRGFWETYRRG 308

>1wbf_A Protein (agglutinin); lectin (agglutinin), legume lectin, protein crystallography, group specificity, saccharide free form; HET: NAG; 2.30A {Psophocarpus tetragonolobus} SCOP: b.29.1.1 PDB: 2d3s_A* 2dtw_A* 1wbl_A* 2dty_A* 2du0_A* 2du1_A* 2e51_A* 2e53_A* 2zmk_A* 2zml_A* 2zmn_A* 2e7t_A* 2e7q_A* Length = 242

 Score =  178 bits (453), Expect = 1e-51
 Identities = 74/271 (27%), Positives = 104/271 (38%), Gaps = 52/271 (19%)

Query: 23  ISAVDFVFNGF--NSSNLSLYGTATVES-RILTLTN-----STTFTIGRALYPSKIPTKR 74
           +  + F FN F  N   L L   A + S  +L LT       T  + GRALY   +    
Sbjct: 1   MKTISFNFNQFHQNEEQLKLQRDARISSNSVLELTKVVNGVPTWNSTGRALYAKPVQVWD 60

Query: 75  PNSSYVYPFSTSFIFAM-APYKGVLAGHGLVFLFVPFHGIKGATEAQHLGLFNRTNDGNS 133
             +  V  F T F F++  P+       GLVF   P +   G     + G++N      S
Sbjct: 61  STTGNVASFETRFSFSIRQPFPRPHPADGLVFFIAPPNTQTGEG-GGYFGIYN----PLS 115

Query: 134 SNHVFGVEFDVFKNQEFNDIDENHVGIDVNSLTSVSAHAAGYWPDNQTDSSGSNSNSGTG 193
                 VEFD F+N    D    H+GIDVNS+ S                          
Sbjct: 116 PYPFVAVEFDTFRNTW--DPQIPHIGIDVNSVISTKTV---------------------- 151

Query: 194 DDEKSFKELKLNNGKNYQVWIDYADSFINITMVEAGMKRPKRPLLSVPLNLSGVLEDEMY 253
                     L+NG    V I Y  S   + +V           ++  ++L  VL + + 
Sbjct: 152 -------PFTLDNGGIANVVIKYDASTKILHVVLVFPSLGTIYTIADIVDLKQVLPESVN 204

Query: 254 VGFTAATGQ-------LVESHKILAWSFSNT 277
           VGF+AATG          E+H IL+WSFS +
Sbjct: 205 VGFSAATGDPSGKQRNATETHDILSWSFSAS 235

>1qnw_A Chitin binding lectin, UEA-II; carbohydrate binding; HET: NAG; 2.35A {Ulex europaeus} SCOP: b.29.1.1 PDB: 1dzq_A* 1qoo_A* 1qos_A* 1qot_A* Length = 242

 Score =  177 bits (450), Expect = 2e-51
 Identities = 66/266 (24%), Positives = 111/266 (41%), Gaps = 40/266 (15%)

Query: 22  SISAVDFVFNGF--NSSNLSLYGTATVES-RILTLTN---STTFTIGRALYPSKIPTKRP 75
               + F F+ F  N  N+   G A+V +  +L +T     TT +IGRALY + I     
Sbjct: 2   LSDDLSFNFDKFVPNQKNIIFQGDASVSTTGVLQVTKVSKPTTTSIGRALYAAPIQIWDS 61

Query: 76  NSSYVYPFSTSFIFAMAPYKGVLAGHGLVFLFVPFHGIKGATEAQHLGLFNRTNDGNSSN 135
            +  V  F+TSF F +   K      GL F   P +    +  +  +     ++D  SSN
Sbjct: 62  ITGKVASFATSFSFVVKADKSD-GVDGLAFFLAPANSQIPSGSSAGMFGLFSSSDSKSSN 120

Query: 136 HVFGVEFDVFKNQEFN--DIDENHVGIDVNSLTSVSAHAAGYWPDNQTDSSGSNSNSGTG 193
            +  VEFD +  + +N  D D  H+GIDVNS+ S+      +                  
Sbjct: 121 QIIAVEFDTYFGKAYNPWDPDFKHIGIDVNSIKSIKTVKWDW------------------ 162

Query: 194 DDEKSFKELKLNNGKNYQVWIDYADSFINITMVEAGMKRPKRPLLSVPLNLSGVLEDEMY 253
                       NG+   V I Y     ++T+  +        +++  ++L  +L + + 
Sbjct: 163 -----------RNGEVADVVITYRAPTKSLTVCLSYPSDGTSNIITASVDLKAILPEWVS 211

Query: 254 VGFTAATGQLV--ESHKILAWSFSNT 277
           VGF+   G     E+H +L+W F++ 
Sbjct: 212 VGFSGGVGNAAEFETHDVLSWYFTSN 237

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} PDB: 3c4c_A* 3c4d_A* 3idp_A* 3ii5_A* 3d4q_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 2fb8_A* 4dbn_A* 1uwj_A* 1uwh_A* 3q96_A* Length = 289

 Score =  175 bits (446), Expect = 5e-50
 Identities = 75/317 (23%), Positives = 138/317 (43%), Gaps = 41/317 (12%)

Query: 329 IKRKQRRARE--REEMEDWELEYWPHRITYQEIEAATKGFSEENVIGVGGNGKVYKGVLE 386
           +K+         R+  +DWE       I   +I            IG G  G VYKG   
Sbjct: 1   MKKGHHHHHHGSRDAADDWE-------IPDGQIT-------VGQRIGSGSFGTVYKGKWH 46

Query: 387 GGGAEIAVKRI--SHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYM 444
           G   ++AVK +  +       +AF  E+  L + +H +++   G+    +  L +V  + 
Sbjct: 47  G---DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTAPQ--LAIVTQWC 101

Query: 445 ENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKE 504
           E  SL   +   +       ++ I + +  A G+ YLH    K ++HRD+KS+N+ L ++
Sbjct: 102 EGSSLYHHLHASETK--FEMKKLIDIARQTARGMDYLHA---KSIIHRDLKSNNIFLHED 156

Query: 505 MNGRLGDFGLARMHGHGQVAST-TRVVGTVGYLAPEVF---SSGRASTQTDVFGFGILIL 560
              ++GDFGLA        +    ++ G++ ++APEV     S   S Q+DV+ FGI++ 
Sbjct: 157 NTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLY 216

Query: 561 EVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRAKGGFDEDEVERVLHLGLLCAY 620
           E+++G+ P      N  +++  +       D    R         +  +R+  L   C  
Sbjct: 217 ELMTGQLPY-SNINNRDQIIEMVGRGSLSPDLSKVR--------SNCPKRMKRLMAECLK 267

Query: 621 PDPRARPTMRQVVKVLE 637
                RP+  +++  +E
Sbjct: 268 KKRDERPSFPRILAEIE 284

>1n47_A Isolectin B4; cancer antigen, vicia villosa lectin, glycoprotein TN-bindin protein, carbohydrate recognition, sugar binding protein; HET: NAG FUC TNR; 2.70A {Vicia villosa} SCOP: b.29.1.1 Length = 233

 Score =  172 bits (437), Expect = 1e-49
 Identities = 67/264 (25%), Positives = 101/264 (38%), Gaps = 46/264 (17%)

Query: 25  AVDFVFNGF--NSSNLSLYGTATVESR-ILTLTNST-----TFTIGRALYPSKIPTKRPN 76
           +  F F  F  N +NL L   A V S   L LT          ++GRALY + I     +
Sbjct: 3   STSFSFTNFNPNQNNLILQEDALVNSAGTLELTAVAAGAPVPDSLGRALYAAPIHIH--D 60

Query: 77  SSYVYPFSTSFIFAMAPYKGVLAGHGLVFLFVPFHGIKGATEAQHLGLFNRTNDGNSSNH 136
           ++ +  F+TSF F MA         GL F   P    +       LGLF      ++S  
Sbjct: 61  NTTLASFTTSFSFVMAAPAAAAVADGLAFFLAP-PDTQPQARGGFLGLFADRA-HDASYQ 118

Query: 137 VFGVEFDVFKNQEFNDIDENHVGIDVNSLTSVSAHAAGYWPDNQTDSSGSNSNSGTGDDE 196
              VEFD + N    D +  H+GID N + S                             
Sbjct: 119 TVAVEFDTYSN--AWDPNYTHIGIDTNGIESKKTT------------------------- 151

Query: 197 KSFKELKLNNGKNYQVWIDYADSFINITMVEAGMKRPKRPLLSVPLNLSGVLEDEMYVGF 256
                  +  G+   + I Y  S   +              +S  ++L  +L + + VGF
Sbjct: 152 ----PFDMVYGEKANIVITYQASTKALAASLVFPVSQTSYAVSARVDLRDILPEYVRVGF 207

Query: 257 TAATG---QLVESHKILAWSFSNT 277
           +A TG    +VE+H I++WSF+ +
Sbjct: 208 SATTGLNAGVVETHDIVSWSFAVS 231

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} PDB: 3kmw_A* 3rep_A* Length = 271

 Score =  172 bits (439), Expect = 3e-49
 Identities = 54/304 (17%), Positives = 116/304 (38%), Gaps = 49/304 (16%)

Query: 343 EDWELEYWPHRITYQEIEAATKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHEND 402
           +          I ++++            +    +G+++KG  +G   +I VK +   + 
Sbjct: 3   KHSG-------IDFKQLN-------FLTKLNENHSGELWKGRWQG--NDIVVKVLKVRDW 46

Query: 403 GG--TRAFLAEISSLGRLKHKSLVGLRGWCKRE-KGSLMLVYDYMENGSLDKWIFQCDGS 459
               +R F  E   L    H +++ + G C+        L+  +M  GSL   +     +
Sbjct: 47  STRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLITHWMPYGSLYNVL-HEGTN 105

Query: 460 MMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHG 519
            ++   + ++   D+A G+ +LH   E  +    + S +V++D++M  R+    +     
Sbjct: 106 FVVDQSQAVKFALDMARGMAFLH-TLEPLIPRHALNSRSVMIDEDMTARISMADVKF--- 161

Query: 520 HGQVASTTRVVGTVGYLAPEVFSSGRASTQT---DVFGFGILILEVLSGRRPIEEGKPNL 576
                 +   +    ++APE        T     D++ F +L+ E+++   P  +     
Sbjct: 162 ---SFQSPGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSN-- 216

Query: 577 VEMVWELMVQGKLLDALDARLRAKGGFDEDEVERVLHLGLL---CAYPDPRARPTMRQVV 633
           +E+  ++ ++G        R     G          H+  L   C   DP  RP    +V
Sbjct: 217 MEIGMKVALEGL-------RPTIPPGISP-------HVSKLMKICMNEDPAKRPKFDMIV 262

Query: 634 KVLE 637
            +LE
Sbjct: 263 PILE 266

>1dhk_B Bean lectin-like inhibitor, porcine pancreatic alpha-amylase; CO (hydrolase-inhibitor), complex (hydrolase-inhibitor) comple; HET: NAG; 1.85A {Phaseolus vulgaris} SCOP: b.29.1.1 PDB: 1viw_B* Length = 223

 Score =  169 bits (430), Expect = 9e-49
 Identities = 64/278 (23%), Positives = 107/278 (38%), Gaps = 62/278 (22%)

Query: 24  SAVDFVFNGFNSSNLSLYGTATVESR-ILTLTNSTTFTIGRALYPSKIPTKRPNSSYVYP 82
           +   F+ + FN +NL L G ATV S   L L+ ++  ++ RA Y + I  +   +  V  
Sbjct: 2   TETSFIIDAFNKTNLILQGDATVSSNGNLQLSYNSYDSMSRAFYSAPIQIRDSTTGNVAS 61

Query: 83  FSTSFIFAMAPYKGVLAGHGLVFLFVPFHGIKGATEAQHLGLFNRTNDGNSSNHVFGVEF 142
           F T+F   +  ++   +  GL F+ VP                       S      VEF
Sbjct: 62  FDTNFTMNIRTHRQANSAVGLDFVLVP-------------------VQPESKGDTVTVEF 102

Query: 143 DVFKNQEFNDIDENHVGIDVNSLTSVSAHAAGYWPDNQTDSSGSNSNSGTGDDEKSFKEL 202
           D F +          + IDVN+    S                               ++
Sbjct: 103 DTFLS---------RISIDVNNNDIKSVPW----------------------------DV 125

Query: 203 KLNNGKNYQVWIDYADSFINITMVEAGMKRPKRPLLSVPLNLSGVLEDEMYVGFTAATGQ 262
              +G+N +V I Y  S    ++  +     K   +S  + L   + D + VGF+A +G 
Sbjct: 126 HDYDGQNAEVRITYNSSTKVFSVSLSNPSTGKSNNVSTTVELEKEVYDWVSVGFSATSGA 185

Query: 263 L---VESHKILAWSFSNTKFSLSEELITSGLPSFVLPK 297
                E+H +L+WSFS+   +L ++   S   + VL K
Sbjct: 186 YQWSYETHDVLSWSFSSKFINLKDQ--KSERSNIVLNK 221

>1ioa_A Arcelin-5A, ARC5A; lectin-like proteins, plant defense proteins, lectin; HET: NAG FUC; 2.70A {Phaseolus vulgaris} SCOP: b.29.1.1 Length = 240

 Score =  168 bits (427), Expect = 4e-48
 Identities = 64/265 (24%), Positives = 107/265 (40%), Gaps = 51/265 (19%)

Query: 24  SAVDFVFNGFNS-SNLSLYGTATVESR-ILTLTNSTT------FTIGRALYPSKIPTKRP 75
           +   F F  F++   L L G AT+ S+  L LT   +       ++GRA Y   I  K  
Sbjct: 2   TETSFNFPNFHTDDKLILQGNATISSKGQLQLTGVGSNELPRVDSLGRAFYSDPIQIK-- 59

Query: 76  NSSYVYPFSTSFIFAMAPYKGVLAGHGLVFLFVPFHGIKGATEAQHLGLFNRTNDGNSSN 135
           +S+ V  F+T+F F +      ++ +GL F  VP +        + LG+FN TN+   + 
Sbjct: 60  DSNNVASFNTNFTFIIRAKNQSISAYGLAFALVPVNSPPQKK-QEFLGIFN-TNNPEPNA 117

Query: 136 HVFGVEFDVFKNQEFNDIDENHVGIDVNSLTSVSAHAAGYWPDNQTDSSGSNSNSGTGDD 195
               V F+ FKN+   D D+N +   VN                                
Sbjct: 118 RTVAVVFNTFKNRI--DFDKNFIKPYVNENCDFH-------------------------- 149

Query: 196 EKSFKELKLNNGKNYQVWIDYADSFINITMVEAGMKRPKRPLLSVPLNLSGVLEDEMYVG 255
                     NG+   V I Y  S  ++ +         +  +S  ++L   +++ + VG
Sbjct: 150 --------KYNGEKTDVQITYDSSNNDLRVFLHFTVSQVKCSVSATVHLEKEVDEWVSVG 201

Query: 256 FTAATG---QLVESHKILAWSFSNT 277
           F+  +G      E+H +L+WSFS+ 
Sbjct: 202 FSPTSGLTEDTTETHDVLSWSFSSK 226

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* Length = 301

 Score =  170 bits (433), Expect = 4e-48
 Identities = 74/302 (24%), Positives = 126/302 (41%), Gaps = 42/302 (13%)

Query: 369 ENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAE--ISSLGRLKHKSLVGL 426
              +G G  G+V++G     G  +AVK  S  ++   +++  E  + +   L+H++++G 
Sbjct: 13  LECVGKGRYGEVWRGSW--QGENVAVKIFSSRDE---KSWFRETELYNTVMLRHENILGF 67

Query: 427 RGWCKREKGS---LMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHE 483
                  + S   L L+  Y E GSL  ++        L     +R++  +A+G+ +LH 
Sbjct: 68  IASDMTSRHSSTQLWLITHYHEMGSLYDYL----QLTTLDTVSCLRIVLSIASGLAHLHI 123

Query: 484 -----GWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQV---ASTTRVVGTVGY 535
                  +  + HRD+KS N+L+ K     + D GLA MH              VGT  Y
Sbjct: 124 EIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRY 183

Query: 536 LAPEVF------SSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMV--QG 587
           +APEV           +  + D++ FG+++ EV   RR +  G     +  +  +V    
Sbjct: 184 MAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVA--RRMVSNGIVEDYKPPFYDVVPNDP 241

Query: 588 KLLDALDA------RLRAKGGFDEDEVERVLHLGLL--CAYPDPRARPTMRQVVKVLEGK 639
              D          R      +  D     L   L+  C Y +P AR T  ++ K L  K
Sbjct: 242 SFEDMRKVVCVDQQRPNIPNRWFSDPTLTSL-AKLMKECWYQNPSARLTALRIKKTLT-K 299

Query: 640 IE 641
           I+
Sbjct: 300 ID 301

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} Length = 271

 Score =  168 bits (429), Expect = 7e-48
 Identities = 76/305 (24%), Positives = 128/305 (41%), Gaps = 49/305 (16%)

Query: 345 WELEYWPHRITYQEIEAATKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGG 404
            E       I + E+         E +IG+GG GKVY+      G E+AVK   H+ D  
Sbjct: 2   LE-------IDFAELT-------LEEIIGIGGFGKVYRAFW--IGDEVAVKAARHDPDED 45

Query: 405 T----RAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSM 460
                     E      LKH +++ LRG C +E  +L LV ++   G L++ +       
Sbjct: 46  ISQTIENVRQEAKLFAMLKHPNIIALRGVCLKE-PNLCLVMEFARGGPLNRVL----SGK 100

Query: 461 MLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGR--------LGDF 512
            +  +  +     +A G+ YLH+     ++HRD+KSSN+L+ +++           + DF
Sbjct: 101 RIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDF 160

Query: 513 GLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEG 572
           GLAR        +     G   ++APEV  +   S  +DV+ +G+L+ E+L+G  P    
Sbjct: 161 GLAREWHRT---TKMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGI 217

Query: 573 KPNLVEMVWELMVQGKLLDALDARLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQV 632
               + + + + +           L       E        L   C  PDP +RP+   +
Sbjct: 218 DG--LAVAYGVAMNKL-------ALPIPSTCPEP----FAKLMEDCWNPDPHSRPSFTNI 264

Query: 633 VKVLE 637
           +  L 
Sbjct: 265 LDQLT 269

>1f9k_A Acidic lectin; legume lectin, glycosylated protein, H-antigenic specificity agglutinin, sugar binding protein; HET: NAG MAN AMG; 3.00A {Psophocarpus tetragonolobus} SCOP: b.29.1.1 PDB: 1fay_A* Length = 238

 Score =  167 bits (423), Expect = 1e-47
 Identities = 73/267 (27%), Positives = 105/267 (39%), Gaps = 51/267 (19%)

Query: 26  VDFVFNGF--NSSNLSLYGTATVES-RILTLTNST------TFTIGRALYPSKIPTKRPN 76
             F F+ F  NS  L+L   A+++S  +L LT  T        + GRALY   I      
Sbjct: 3   QSFNFDHFEENSKELNLQRQASIKSNGVLELTKLTKNGVPVWKSTGRALYAEPIKIWDST 62

Query: 77  SSYVYPFSTSFIFAM-APYKGVLAGHGLVFLFVPFHGIKGATEAQHLGLFNRTNDGNSSN 135
           +  V  F T F F +  PY       GL F  VP        +  +LG+F         +
Sbjct: 63  TGNVASFETRFSFNITQPYAYPEPADGLTFFMVP-PNSPQGEDGGNLGVFK----PPEGD 117

Query: 136 HVFGVEFDVFKNQEFNDIDENHVGIDVNSLTSVSAHAAGYWPDNQTDSSGSNSNSGTGDD 195
           + F VEFD F+N    D    H+GIDVNS+ S                            
Sbjct: 118 NAFAVEFDTFQNTW--DPQVPHIGIDVNSIVSSKTLH----------------------- 152

Query: 196 EKSFKELKLNNGKNYQVWIDYADSFINITMVEAGMKRPKRPLLSVPLNLSGVL--EDEMY 253
                  +L NG    V I Y      + +V A         LS  ++L       + + 
Sbjct: 153 ------FQLENGGVANVVIKYDSPTKILNVVLAFHSVGTVYTLSNIVDLKQEFPNSEWVN 206

Query: 254 VGFTAATG---QLVESHKILAWSFSNT 277
           VG +A TG     VE+H+I++WSF+++
Sbjct: 207 VGLSATTGYQKNAVETHEIISWSFTSS 233

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} Length = 319

 Score =  166 bits (422), Expect = 3e-46
 Identities = 66/320 (20%), Positives = 135/320 (42%), Gaps = 52/320 (16%)

Query: 333 QRRAREREEMEDWELEYWPHRITYQEIEAATKGFSEENVIGVGGNGKVYKGVLEGGGAEI 392
           ++ ++    +++W+       I ++++E          +IG G  G+VY G   G   E+
Sbjct: 16  RKASQTSIFLQEWD-------IPFEQLE-------IGELIGKGRFGQVYHGRWHG---EV 58

Query: 393 AVKRI--SHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLD 450
           A++ I    +N+   +AF  E+ +  + +H+++V   G C      L ++    +  +L 
Sbjct: 59  AIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSP-PHLAIITSLCKGRTLY 117

Query: 451 KWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLG 510
             +   D  ++L   +  ++ +++  G+ YLH    K +LH+D+KS NV  D      + 
Sbjct: 118 SVVR--DAKIVLDVNKTRQIAQEIVKGMGYLHA---KGILHKDLKSKNVFYD-NGKVVIT 171

Query: 511 DFGLARMHGHGQVAS----TTRVVGTVGYLAPEVFSSGRA---------STQTDVFGFGI 557
           DFGL  + G  Q            G + +LAPE+               S  +DVF  G 
Sbjct: 172 DFGLFSISGVLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGT 231

Query: 558 LILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRAKGGFDEDEVERVLHLGLL 617
           +  E+ +   P +        ++W   +   +         ++ G  ++    +  + L 
Sbjct: 232 IWYELHAREWPFKTQPA--EAIIW--QMGTGMK-----PNLSQIGMGKE----ISDILLF 278

Query: 618 CAYPDPRARPTMRQVVKVLE 637
           C   +   RPT  +++ +LE
Sbjct: 279 CWAFEQEERPTFTKLMDMLE 298

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} Length = 337

 Score =  165 bits (419), Expect = 1e-45
 Identities = 73/316 (23%), Positives = 128/316 (40%), Gaps = 48/316 (15%)

Query: 351 PHRITYQEIEAATKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFL- 409
             R   ++I+           IG G  G+V+ G     G ++AVK      +    ++  
Sbjct: 31  VQRTIAKQIQ-------MVKQIGKGRYGEVWMGKW--RGEKVAVKVFFTTEE---ASWFR 78

Query: 410 -AEISSLGRLKHKSLVGLRGWCKREKGS---LMLVYDYMENGSLDKWIFQCDGSMMLSCE 465
             EI     ++H++++G      +  GS   L L+ DY ENGSL  ++     S  L  +
Sbjct: 79  ETEIYQTVLMRHENILGFIAADIKGTGSWTQLYLITDYHENGSLYDYL----KSTTLDAK 134

Query: 466 ERIRVLKDVAAGVLYLHE-----GWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMH-- 518
             +++     +G+ +LH        +  + HRD+KS N+L+ K     + D GLA     
Sbjct: 135 SMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFIS 194

Query: 519 -GHGQVASTTRVVGTVGYLAPEV------FSSGRASTQTDVFGFGILILEVLSGRRPIEE 571
             +         VGT  Y+ PEV       +  ++    D++ FG+++ EV   RR +  
Sbjct: 195 DTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVA--RRCVSG 252

Query: 572 GKPNLVEMVWELMV--QGKLLDALDA------RLRAKGGFDEDEVERVLHLGLL--CAYP 621
           G     ++ +  +V       D  +       R      +  DE  R +   L+  C   
Sbjct: 253 GIVEEYQLPYHDLVPSDPSYEDMREIVCIKKLRPSFPNRWSSDECLRQM-GKLMTECWAH 311

Query: 622 DPRARPTMRQVVKVLE 637
           +P +R T  +V K L 
Sbjct: 312 NPASRLTALRVKKTLA 327

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* Length = 342

 Score =  163 bits (414), Expect = 6e-45
 Identities = 73/296 (24%), Positives = 126/296 (42%), Gaps = 37/296 (12%)

Query: 369 ENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAE--ISSLGRLKHKSLVGL 426
           +  IG G  G+V++G     G E+AVK  S   +   R++  E  I     L+H++++G 
Sbjct: 47  QESIGKGRFGEVWRGKW--RGEEVAVKIFSSREE---RSWFREAEIYQTVMLRHENILGF 101

Query: 427 RGWCKREKGS---LMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHE 483
                ++ G+   L LV DY E+GSL  ++        ++ E  I++    A+G+ +LH 
Sbjct: 102 IAADNKDNGTWTQLWLVSDYHEHGSLFDYL----NRYTVTVEGMIKLALSTASGLAHLHM 157

Query: 484 GWEK-----KVLHRDIKSSNVLLDKEMNGRLGDFGLARMH----GHGQVASTTRVVGTVG 534
                     + HRD+KS N+L+ K     + D GLA  H        +A   R VGT  
Sbjct: 158 EIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHR-VGTKR 216

Query: 535 YLAPEV------FSSGRASTQTDVFGFGILILEVLSGRRP---IEEGKPNLVEMVWELMV 585
           Y+APEV           +  + D++  G++  E+          E+ +    ++V     
Sbjct: 217 YMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPS 276

Query: 586 QGKLLDAL---DARLRAKGGFDEDEVERVL-HLGLLCAYPDPRARPTMRQVVKVLE 637
             ++   +     R      +   E  RV+  +   C Y +  AR T  ++ K L 
Sbjct: 277 VEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLS 332

>2ltn_A PEA lectin, alpha chain; 1.70A {Pisum sativum} SCOP: b.29.1.1 PDB: 1bqp_A* 1hkd_A 1ofs_A* 1rin_A* 1lof_C* 1len_A 1lem_A 1les_A* 2lal_A 1loe_A 1loa_A* 1loc_A* 1lod_A* 1lob_A 1lof_A* 1log_A* 1lgc_A* 1lgb_A* 2b7y_A* Length = 181

 Score =  147 bits (373), Expect = 3e-41
 Identities = 54/206 (26%), Positives = 78/206 (37%), Gaps = 36/206 (17%)

Query: 26  VDFVFNGF--NSSNLSLYGTATVESRILTLTNSTTFTIGRALYPSKIPTKRPNSSYVYPF 83
             F+   F  +  NL   G        LTLT +   T+GRALY S I      +  V  F
Sbjct: 4   TSFLITKFSPDQQNLIFQGDGYTTKEKLTLTKAVKNTVGRALYSSPIHIWDRETGNVANF 63

Query: 84  STSFIFAMAPYKGVLAGHGLVFLFVPFHGIKGATEAQHLGLFNRTNDGNSSNHVFGVEFD 143
            TSF F +          G  F   P    K  T   +LG+FN     + +     VEFD
Sbjct: 64  VTSFTFVINAPNSYNVADGFTFFIAP-VDTKPQTGGGYLGVFNSAE-YDKTTQTVAVEFD 121

Query: 144 VFKNQEFNDIDE-NHVGIDVNSLTSVSAHAAGYWPDNQTDSSGSNSNSGTGDDEKSFKEL 202
            F N  ++  +   H+GIDVNS+ SV+  +                              
Sbjct: 122 TFYNAAWDPSNRDRHIGIDVNSIKSVNTKS-----------------------------W 152

Query: 203 KLNNGKNYQVWIDY--ADSFINITMV 226
           KL NG+   V I +  A + + +++ 
Sbjct: 153 KLQNGEEANVVIAFNAATNVLTVSLT 178

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* Length = 284

 Score =  142 bits (359), Expect = 4e-38
 Identities = 64/284 (22%), Positives = 120/284 (42%), Gaps = 44/284 (15%)

Query: 366 FSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVG 425
           F E  +IG GG G+V+K      G    +KR+ + N+        E+ +L +L H ++V 
Sbjct: 13  FKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNNE----KAEREVKALAKLDHVNIVH 68

Query: 426 LRG---------------WCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRV 470
             G                 + +   L +  ++ + G+L++WI +  G   L     + +
Sbjct: 69  YNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEK-LDKVLALEL 127

Query: 471 LKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRVV 530
            + +  GV Y+H    KK+++RD+K SN+ L      ++GDFGL     +    + +   
Sbjct: 128 FEQITKGVDYIHS---KKLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKRTRS--K 182

Query: 531 GTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLL 590
           GT+ Y++PE  SS     + D++  G+++ E+L       E         +  +  G + 
Sbjct: 183 GTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFETSK-----FFTDLRDGIIS 237

Query: 591 DALDARLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVK 634
           D  D + +             L   LL     P  RP   ++++
Sbjct: 238 DIFDKKEKT------------LLQKLLS--KKPEDRPNTSEILR 267

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} Length = 311

 Score =  139 bits (353), Expect = 6e-37
 Identities = 73/274 (26%), Positives = 109/274 (39%), Gaps = 33/274 (12%)

Query: 366 FSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGT--RAFLAEISSLGRL-KHKS 422
           F   + +G G  G+V+K   +  G   AVKR      G       LAE+ S  ++ +H  
Sbjct: 59  FQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPC 118

Query: 423 LVGLRG-WCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIR-VLKDVAAGVLY 480
            V L   W   E G L L  +     SL +       S+    E ++   L+D    + +
Sbjct: 119 CVRLEQAW--EEGGILYLQTELCG-PSLQQHCEAWGASLP---EAQVWGYLRDTLLALAH 172

Query: 481 LHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEV 540
           LH    + ++H D+K +N+ L      +LGDFGL    G           G   Y+APE+
Sbjct: 173 LHS---QGLVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAGAGEV--QEGDPRYMAPEL 227

Query: 541 FSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRAK 600
                  T  DVF  G+ ILEV         G+       W+ + QG L     A L   
Sbjct: 228 LQGS-YGTAADVFSLGLTILEVACNMELPHGGEG------WQQLRQGYLPPEFTAGL--- 277

Query: 601 GGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVK 634
                 E+  VL   ++   PDP+ R T   ++ 
Sbjct: 278 ----SSELRSVL---VMMLEPDPKLRATAEALLA 304

>4apc_A Serine/threonine-protein kinase NEK1; transferase; 2.10A {Homo sapiens} Length = 350

 Score =  139 bits (351), Expect = 2e-36
 Identities = 58/202 (28%), Positives = 100/202 (49%), Gaps = 12/202 (5%)

Query: 371 VIGVGGNGKVYKGVLEGGGAEIAVKRISHEN--DGGTRAFLAEISSLGRLKHKSLVGLRG 428
            IG G  GK         G +  +K I+              E++ L  +KH ++V  R 
Sbjct: 31  KIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRE 90

Query: 429 WCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERI-RVLKDVAAGVLYLHEGWEK 487
             + E GSL +V DY E G L K I    G +    E++I      +   + ++H+   +
Sbjct: 91  SFE-ENGSLYIVMDYCEGGDLFKRINAQKGVLF--QEDQILDWFVQICLALKHVHD---R 144

Query: 488 KVLHRDIKSSNVLLDKEMNGRLGDFGLAR-MHGHGQVASTTRVVGTVGYLAPEVFSSGRA 546
           K+LHRDIKS N+ L K+   +LGDFG+AR ++   ++A     +GT  YL+PE+  +   
Sbjct: 145 KILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVELARA--CIGTPYYLSPEICENKPY 202

Query: 547 STQTDVFGFGILILEVLSGRRP 568
           + ++D++  G ++ E+ + +  
Sbjct: 203 NNKSDIWALGCVLYELCTLKHA 224

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* Length = 310

 Score =  136 bits (345), Expect = 7e-36
 Identities = 67/279 (24%), Positives = 115/279 (41%), Gaps = 30/279 (10%)

Query: 366 FSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRA---FLAEISSLGRLKHKS 422
           F  E  IG G   +VY+      G  +A+K++   +    +A    + EI  L +L H +
Sbjct: 34  FRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPN 93

Query: 423 LVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERI-RVLKDVAAGVLYL 481
           ++        E   L +V +  + G L + I        L  E  + +    + + + ++
Sbjct: 94  VIKYYASFI-EDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHM 152

Query: 482 HEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLAR-MHGHGQVASTTRVVGTVGYLAPEV 540
           H    ++V+HRDIK +NV +      +LGD GL R        A +  +VGT  Y++PE 
Sbjct: 153 HS---RRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHS--LVGTPYYMSPER 207

Query: 541 FSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGK----LLDALDAR 596
                 + ++D++  G L+ E+ + + P    K NL  +  + + Q        D     
Sbjct: 208 IHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLC-KKIEQCDYPPLPSDHYSEE 266

Query: 597 LRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKV 635
           LR               L  +C  PDP  RP +  V  V
Sbjct: 267 LR--------------QLVNMCINPDPEKRPDVTYVYDV 291

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* Length = 377

 Score =  134 bits (339), Expect = 2e-34
 Identities = 70/292 (23%), Positives = 118/292 (40%), Gaps = 63/292 (21%)

Query: 369 ENVIGVGGNGKVYKGVLEGGGAEIAVKRI-SHENDGGTRAFLAEISSLGRLKHKSLVGLR 427
              IG G  G+V+ G L      +AVK             FL E   L +  H ++V L 
Sbjct: 119 GEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLI 178

Query: 428 GWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEK 487
           G C +++  + +V + ++ G    ++        L  +  ++++ D AAG+ YL     K
Sbjct: 179 GVCTQKQ-PIYIVMELVQGGDFLTFLRTEGAR--LRVKTLLQMVGDAAAGMEYLES---K 232

Query: 488 KVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRVVGT----VGYLAPEVFSS 543
             +HRD+ + N L+ ++   ++ DFG++R    G         G     V + APE  + 
Sbjct: 233 CCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVY---AASGGLRQVPVKWTAPEALNY 289

Query: 544 GRASTQTDVFGFGILILEVLS-GRRP------------IEEG----KPNLV-EMVWELMV 585
           GR S+++DV+ FGIL+ E  S G  P            +E+G     P L  + V+ LM 
Sbjct: 290 GRYSSESDVWSFGILLWETFSLGASPYPNLSNQQTREFVEKGGRLPCPELCPDAVFRLME 349

Query: 586 QGKLLDALDARLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLE 637
           Q                               C   +P  RP+   + + L+
Sbjct: 350 Q-------------------------------CWAYEPGQRPSFSTIYQELQ 370

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* Length = 299

 Score =  130 bits (330), Expect = 5e-34
 Identities = 59/292 (20%), Positives = 100/292 (34%), Gaps = 42/292 (14%)

Query: 366 FSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTR-AFLAEISSLGRLKHKSLV 424
           F     +G GG G V++   +      A+KRI   N    R   + E+ +L +L+H  +V
Sbjct: 7   FEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIV 66

Query: 425 GLRGWC-----------KREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKD 473
                               K  L +        +L  W+              + +   
Sbjct: 67  RYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQ 126

Query: 474 VAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRV---- 529
           +A  V +LH    K ++HRD+K SN+    +   ++GDFGL       +   T       
Sbjct: 127 IAEAVEFLHS---KGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPA 183

Query: 530 -------VGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWE 582
                  VGT  Y++PE       S + D+F  G+++ E+L    P              
Sbjct: 184 YARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELL---YPFSTQ--MERVRTLT 238

Query: 583 LMVQGKLLDALDARLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVK 634
            +   K       +            E V+   +L   P P  RP    +++
Sbjct: 239 DVRNLKFPPLFTQKYPC---------EYVMVQDMLS--PSPMERPEAINIIE 279

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 3q6w_A* 3r7o_A* 3q6u_A* 3cth_A* 3ce3_A* 3ctj_A* ... Length = 298

 Score =  130 bits (330), Expect = 6e-34
 Identities = 76/321 (23%), Positives = 133/321 (41%), Gaps = 47/321 (14%)

Query: 339 REEMEDWELEYWPHRITYQEIEAATKGFSEENVIGVGGNGKVYKGVLEGGGAE---IAVK 395
            + ++   +      + + E            VIG G  G VY G L     +    AVK
Sbjct: 12  VQAVQHVVIGPSSLIVHFNE------------VIGRGHFGCVYHGTLLDNDGKKIHCAVK 59

Query: 396 RISHENDGGTRA-FLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIF 454
            ++   D G  + FL E   +    H +++ L G C R +GS ++V  YM++G L  +I 
Sbjct: 60  SLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIR 119

Query: 455 QCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGL 514
               +   + ++ I     VA G+ YL     KK +HRD+ + N +LD++   ++ DFGL
Sbjct: 120 NETHN--PTVKDLIGFGLQVAKGMKYLA---SKKFVHRDLAARNCMLDEKFTVKVADFGL 174

Query: 515 AR-MHGHGQVASTTRVVGTVGYL------APEVFSSGRASTQTDVFGFGILILEVLS-GR 566
           AR M+          V    G        A E   + + +T++DV+ FG+L+ E+++ G 
Sbjct: 175 ARDMYDK----EYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGA 230

Query: 567 RPIEEGKPNLVEMVWELMVQGKLLDALDARLRAKGGFDEDEVERVLHLGLLCAYPDPRAR 626
            P           +   ++QG+ L              E   + +  + L C +P    R
Sbjct: 231 PPY-PDVNT--FDITVYLLQGRRLLQ-----------PEYCPDPLYEVMLKCWHPKAEMR 276

Query: 627 PTMRQVVKVLEGKIEAGIENE 647
           P+  ++V  +       I   
Sbjct: 277 PSFSELVSRISAIFSTFIGEH 297

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7 Length = 373

 Score =  132 bits (333), Expect = 9e-34
 Identities = 75/323 (23%), Positives = 139/323 (43%), Gaps = 39/323 (12%)

Query: 339 REEMEDWELEYWPHRITYQEIEAATKGFSEENVIGVGGNGKVYKGVLEGGGAE---IAVK 395
            + ++   +      + + E            VIG G  G VY G L     +    AVK
Sbjct: 76  VQAVQHVVIGPSSLIVHFNE------------VIGRGHFGCVYHGTLLDNDGKKIHCAVK 123

Query: 396 RISHENDGGTRA-FLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIF 454
            ++   D G  + FL E   +    H +++ L G C R +GS ++V  YM++G L  +I 
Sbjct: 124 SLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIR 183

Query: 455 QCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGL 514
               +   + ++ I     VA G+ +L     KK +HRD+ + N +LD++   ++ DFGL
Sbjct: 184 NETHN--PTVKDLIGFGLQVAKGMKFLA---SKKFVHRDLAARNCMLDEKFTVKVADFGL 238

Query: 515 AR-MHGHGQVASTTRVVGT--VGYLAPEVFSSGRASTQTDVFGFGILILEVLS-GRRPIE 570
           AR M+     +   +      V ++A E   + + +T++DV+ FG+L+ E+++ G  P  
Sbjct: 239 ARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPY- 297

Query: 571 EGKPNLVEMVWELMVQGKLLDALDARLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMR 630
                    +   ++QG+ L              E   + +  + L C +P    RP+  
Sbjct: 298 PDVNT--FDITVYLLQGRRLLQ-----------PEYCPDPLYEVMLKCWHPKAEMRPSFS 344

Query: 631 QVVKVLEGKIEAGIENETEDMDA 653
           ++V  +       I      ++A
Sbjct: 345 ELVSRISAIFSTFIGEHYVHVNA 367

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A Length = 495

 Score =  134 bits (338), Expect = 1e-33
 Identities = 71/309 (22%), Positives = 136/309 (44%), Gaps = 35/309 (11%)

Query: 330 KRKQRRAREREEMEDWELEYWPHRITYQEIEAATKGFSEENVIGVGGNGKVYKGVLEGGG 389
           + K          + WE+E     IT +              +G G  G+VY+GV +   
Sbjct: 200 RNKPTIYGVSPNYDKWEME--RTDITMKHK------------LGGGQYGEVYEGVWKKYS 245

Query: 390 AEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSL 449
             +AVK +  E+      FL E + +  +KH +LV L G C RE     ++ ++M  G+L
Sbjct: 246 LTVAVKTL-KEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTRE-PPFYIITEFMTYGNL 303

Query: 450 DKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRL 509
             ++ +C+    +S    + +   +++ + YL +   K  +HR++ + N L+ +    ++
Sbjct: 304 LDYLRECNRQE-VSAVVLLYMATQISSAMEYLEK---KNFIHRNLAARNCLVGENHLVKV 359

Query: 510 GDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLS-GRRP 568
            DFGL+R+       +       + + APE  +  + S ++DV+ FG+L+ E+ + G  P
Sbjct: 360 ADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSP 419

Query: 569 IEEGKPNLVEMVWELMVQGKLLDALDARLRAKGGFDEDEVERVLHLGLLCAYPDPRARPT 628
              G       V+EL+ +   ++             E   E+V  L   C   +P  RP+
Sbjct: 420 Y-PGIDL--SQVYELLEKDYRMERP-----------EGCPEKVYELMRACWQWNPSDRPS 465

Query: 629 MRQVVKVLE 637
             ++ +  E
Sbjct: 466 FAEIHQAFE 474

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 287

 Score =  127 bits (322), Expect = 5e-33
 Identities = 71/318 (22%), Positives = 120/318 (37%), Gaps = 74/318 (23%)

Query: 343 EDWELEYWPHRITYQEIEAATKGFSEENVIGVGGNGKVYKGVLEGGGAEI--AVKRISHE 400
           +   L+     +   +IE           +G G  G V +GV      +I  A+K +   
Sbjct: 2   KKLFLK--RDNLLIADIE-----------LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQG 48

Query: 401 NDGGTR-AFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGS 459
            +       + E   + +L +  +V L G C+ E  +LMLV +    G L K++      
Sbjct: 49  TEKADTEEMMREAQIMHQLDNPYIVRLIGVCQAE--ALMLVMEMAGGGPLHKFLVGKREE 106

Query: 460 MMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHG 519
             +       +L  V+ G+ YL E   K  +HRD+ + NVLL      ++ DFGL++  G
Sbjct: 107 --IPVSNVAELLHQVSMGMKYLEE---KNFVHRDLAARNVLLVNRHYAKISDFGLSKALG 161

Query: 520 HGQVASTTRVVGT--VGYLAPEVFSSGRASTQTDVFGFGILILEVLS-GRRP-------- 568
                 T R  G   + + APE  +  + S+++DV+ +G+ + E LS G++P        
Sbjct: 162 ADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPE 221

Query: 569 ----IEEGK-----PNLVEMVWELMVQGKLLDALDARLRAKGGFDEDEVERVLHLGLLCA 619
               IE+GK     P     ++ LM                                 C 
Sbjct: 222 VMAFIEQGKRMECPPECPPELYALMSD-------------------------------CW 250

Query: 620 YPDPRARPTMRQVVKVLE 637
                 RP    V + + 
Sbjct: 251 IYKWEDRPDFLTVEQRMR 268

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* Length = 279

 Score =  127 bits (321), Expect = 5e-33
 Identities = 58/204 (28%), Positives = 96/204 (47%), Gaps = 7/204 (3%)

Query: 371 VIGVGGNGKVYKGVLEGGGAEIAVKRISHE--NDGGTRAFLAEISSLGRLKHKSLVGLRG 428
            IG G  G+  K   +  G  +  K + +    +   +  ++E++ L  LKH ++V    
Sbjct: 13  TIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYD 72

Query: 429 -WCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERI-RVLKDVAAGVLYLHE--G 484
               R   +L +V +Y E G L   I +         EE + RV+  +   +   H    
Sbjct: 73  RIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSD 132

Query: 485 WEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSG 544
               VLHRD+K +NV LD + N +LGDFGLAR+  H    + T  VGT  Y++PE  +  
Sbjct: 133 GGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKT-FVGTPYYMSPEQMNRM 191

Query: 545 RASTQTDVFGFGILILEVLSGRRP 568
             + ++D++  G L+ E+ +   P
Sbjct: 192 SYNEKSDIWSLGCLLYELCALMPP 215

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens} Length = 295

 Score =  127 bits (321), Expect = 9e-33
 Identities = 60/204 (29%), Positives = 97/204 (47%), Gaps = 14/204 (6%)

Query: 371 VIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWC 430
           V+G G  G VY G        IA+K I   +   ++    EI+    LKHK++V   G  
Sbjct: 29  VLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLG-S 87

Query: 431 KREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRV-LKDVAAGVLYLHEGWEKKV 489
             E G + +  + +  GSL   +    G +  + E+ I    K +  G+ YLH   + ++
Sbjct: 88  FSENGFIKIFMEQVPGGSLSALLRSKWGPLKDN-EQTIGFYTKQILEGLKYLH---DNQI 143

Query: 490 LHRDIKSSNVLLDKEMNGR--LGDFGLA-RMHGHGQVASTTRVVGTVGYLAPEVFSSGR- 545
           +HRDIK  NVL++   +G   + DFG + R+ G      T    GT+ Y+APE+   G  
Sbjct: 144 VHRDIKGDNVLINTY-SGVLKISDFGTSKRLAGINPCTET--FTGTLQYMAPEIIDKGPR 200

Query: 546 -ASTQTDVFGFGILILEVLSGRRP 568
                 D++  G  I+E+ +G+ P
Sbjct: 201 GYGKAADIWSLGCTIIEMATGKPP 224

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ... Length = 288

 Score =  125 bits (317), Expect = 2e-32
 Identities = 71/298 (23%), Positives = 134/298 (44%), Gaps = 35/298 (11%)

Query: 341 EMEDWELEYWPHRITYQEIEAATKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHE 400
             + WE+E     IT +              +G G  G+VY+GV +     +AVK +  E
Sbjct: 4   NYDKWEME--RTDITMKHK------------LGGGQYGEVYEGVWKKYSLTVAVKTL-KE 48

Query: 401 NDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSM 460
           +      FL E + +  +KH +LV L G C RE     ++ ++M  G+L  ++ +C+   
Sbjct: 49  DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREP-PFYIITEFMTYGNLLDYLRECNRQE 107

Query: 461 MLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGH 520
            +S    + +   +++ + YL +   K  +HRD+ + N L+ +    ++ DFGL+R+   
Sbjct: 108 -VSAVVLLYMATQISSAMEYLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTG 163

Query: 521 GQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLS-GRRPIEEGKPNLVEM 579
               +       + + APE  +  + S ++DV+ FG+L+ E+ + G  P   G       
Sbjct: 164 DTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY-PGIDL--SQ 220

Query: 580 VWELMVQGKLLDALDARLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLE 637
           V+EL+ +   ++             E   E+V  L   C   +P  RP+  ++ +  E
Sbjct: 221 VYELLEKDYRMERP-----------EGCPEKVYELMRACWQWNPSDRPSFAEIHQAFE 267

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A* Length = 289

 Score =  125 bits (315), Expect = 4e-32
 Identities = 65/294 (22%), Positives = 105/294 (35%), Gaps = 52/294 (17%)

Query: 366 FSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGT--RAFLAEISSLGRL-KHKS 422
           F E   IG G  G V+K V    G   A+KR      G    +  L E+ +   L +H  
Sbjct: 13  FHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSH 72

Query: 423 LVGLRG-WCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRV-LKDVAAGVLY 480
           +V     W   E   +++  +Y   GSL   I +    M    E  ++  L  V  G+ Y
Sbjct: 73  VVRYFSAW--AEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRY 130

Query: 481 LHEGWEKKVLHRDIKSSNVLLDKEMNG-------------------RLGDFGLARMHGHG 521
           +H      ++H DIK SN+ + +                       ++GD G        
Sbjct: 131 IHS---MSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHV-----T 182

Query: 522 QVASTTRVVGTVGYLAPEVFSSGRA-STQTDVFGFGILILEVLSGRRPIEEGKPNLVEMV 580
           +++S     G   +LA EV         + D+F   + ++           G        
Sbjct: 183 RISSPQVEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNGDQ------ 236

Query: 581 WELMVQGKLLDALDARLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVK 634
           W  + QG+ L  +   L         E   +L    +  +PDP  RP+   +VK
Sbjct: 237 WHEIRQGR-LPRIPQVL-------SQEFTELLK---VMIHPDPERRPSAMALVK 279

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens} Length = 327

 Score =  126 bits (318), Expect = 5e-32
 Identities = 58/295 (19%), Positives = 116/295 (39%), Gaps = 66/295 (22%)

Query: 369 ENVIGVGGNGKVYKGVL--EGGGAEI--AVKRISHENDGGTR-AFLAEISSLGRLKHKSL 423
             V+G G  G VYKG+   EG   +I  A+K +            L E   +  + +  +
Sbjct: 20  IKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHV 79

Query: 424 VGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHE 483
             L G C     ++ L+   M  G L  ++ +   +  +  +  +     +A G+ YL +
Sbjct: 80  CRLLGICLTS--TVQLITQLMPFGCLLDYVREHKDN--IGSQYLLNWCVQIAKGMNYLED 135

Query: 484 GWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRVVGT---VGYLAPEV 540
              ++++HRD+ + NVL+    + ++ DFGLA++ G  +        G    + ++A E 
Sbjct: 136 ---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE--GGKVPIKWMALES 190

Query: 541 FSSGRASTQTDVFGFGILILEVLS-GRRP------------IEEGK-----PNLVEMVWE 582
                 + Q+DV+ +G+ + E+++ G +P            +E+G+     P     V+ 
Sbjct: 191 ILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYM 250

Query: 583 LMVQGKLLDALDARLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLE 637
           +M +                               C   D  +RP  R+++    
Sbjct: 251 IMRK-------------------------------CWMIDADSRPKFRELIIEFS 274

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 Length = 535

 Score =  129 bits (327), Expect = 6e-32
 Identities = 71/315 (22%), Positives = 131/315 (41%), Gaps = 37/315 (11%)

Query: 324 CSLFLIKRKQRRAREREEMEDWELEYWPHRITYQEIEAATKGFSEENVIGVGGNGKVYKG 383
             L  +    +   +    + WE+      +  +              +G G  G+V+ G
Sbjct: 241 HRLTTVCPTSKPQTQGLAKDAWEIP--RESLRLEV------------KLGQGCFGEVWMG 286

Query: 384 VLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDY 443
              G    +A+K +         AFL E   + +L+H+ LV L      E   + +V +Y
Sbjct: 287 TWNGTT-RVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE--PIYIVTEY 342

Query: 444 MENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDK 503
           M  GSL  ++    G   L   + + +   +A+G+ Y+        +HRD++++N+L+ +
Sbjct: 343 MSKGSLLDFLKGETGKY-LRLPQLVDMAAQIASGMAYVER---MNYVHRDLRAANILVGE 398

Query: 504 EMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVL 563
            +  ++ DFGLAR+    +  +       + + APE    GR + ++DV+ FGIL+ E+ 
Sbjct: 399 NLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELT 458

Query: 564 S-GRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRAKGGFDEDEVERVLHLGLLCAYPD 622
           + GR P   G  N    V + + +G  +               +  E +  L   C   +
Sbjct: 459 TKGRVPY-PGMVN--REVLDQVERGYRMPC-----------PPECPESLHDLMCQCWRKE 504

Query: 623 PRARPTMRQVVKVLE 637
           P  RPT   +   LE
Sbjct: 505 PEERPTFEYLQAFLE 519

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A* Length = 278

 Score =  124 bits (313), Expect = 7e-32
 Identities = 84/273 (30%), Positives = 129/273 (47%), Gaps = 33/273 (12%)

Query: 369 ENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGT-RAFLAEISSLGRLKHKSLVGLR 427
              IG G  G V  G   G   ++AVK I    +  T +AFLAE S + +L+H +LV L 
Sbjct: 26  LQTIGKGEFGDVMLGDYRG--NKVAVKCI---KNDATAQAFLAEASVMTQLRHSNLVQLL 80

Query: 428 GWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEK 487
           G    EKG L +V +YM  GSL  ++     S +L  +  ++   DV   + YL      
Sbjct: 81  GVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRS-VLGGDCLLKFSLDVCEAMEYLE---GN 136

Query: 488 KVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRVVGT--VGYLAPEVFSSGR 545
             +HRD+ + NVL+ ++   ++ DFGL +       AS+T+  G   V + APE     +
Sbjct: 137 NFVHRDLAARNVLVSEDNVAKVSDFGLTK------EASSTQDTGKLPVKWTAPEALREKK 190

Query: 546 ASTQTDVFGFGILILEVLS-GRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRAKGGFD 604
            ST++DV+ FGIL+ E+ S GR P     P   + V   + +G  +DA            
Sbjct: 191 FSTKSDVWSFGILLWEIYSFGRVPY-PRIPL--KDVVPRVEKGYKMDA-----------P 236

Query: 605 EDEVERVLHLGLLCAYPDPRARPTMRQVVKVLE 637
           +     V  +   C + D   RP+  Q+ + LE
Sbjct: 237 DGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLE 269

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ... Length = 452

 Score =  127 bits (322), Expect = 9e-32
 Identities = 69/270 (25%), Positives = 122/270 (45%), Gaps = 23/270 (8%)

Query: 369 ENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRG 428
           E  +G G  G+V+ G   G    +A+K +         AFL E   + +L+H+ LV L  
Sbjct: 189 EVKLGQGCFGEVWMGTWNGTT-RVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLYA 246

Query: 429 WCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKK 488
               E   + +V +YM  GSL  ++    G   L   + + +   +A+G+ Y+       
Sbjct: 247 VVSEE--PIYIVTEYMSKGSLLDFLKGETGKY-LRLPQLVDMAAQIASGMAYVER---MN 300

Query: 489 VLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRAST 548
            +HRD++++N+L+ + +  ++ DFGLAR+    +  +       + + APE    GR + 
Sbjct: 301 YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTI 360

Query: 549 QTDVFGFGILILEVLS-GRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRAKGGFDEDE 607
           ++DV+ FGIL+ E+ + GR P   G  N    V + + +G  +               + 
Sbjct: 361 KSDVWSFGILLTELTTKGRVPYP-GMVN--REVLDQVERGYRMPCP-----------PEC 406

Query: 608 VERVLHLGLLCAYPDPRARPTMRQVVKVLE 637
            E +  L   C   +P  RPT   +   LE
Sbjct: 407 PESLHDLMCQCWRKEPEERPTFEYLQAFLE 436

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens} Length = 326

 Score =  124 bits (314), Expect = 1e-31
 Identities = 63/311 (20%), Positives = 131/311 (42%), Gaps = 36/311 (11%)

Query: 340 EEMEDWELEYWPHRITYQEIEAATKGFSEENVIGVGGNGKVYKGVLEGG----GAEIAVK 395
           E+ +  + E     + + +             +G G  G V     +      G  +AVK
Sbjct: 31  EDRDPTQFE--ERHLKFLQ------------QLGKGNFGSVEMCRYDPLQDNTGEVVAVK 76

Query: 396 RISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKG-SLMLVYDYMENGSLDKWIF 454
           ++ H  +   R F  EI  L  L+H ++V  +G C      +L L+ +Y+  GSL  ++ 
Sbjct: 77  KLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQ 136

Query: 455 QCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGL 514
           +      +   + ++    +  G+ YL     K+ +HRD+ + N+L++ E   ++GDFGL
Sbjct: 137 KHKER--IDHIKLLQYTSQICKGMEYLG---TKRYIHRDLATRNILVENENRVKIGDFGL 191

Query: 515 ARMHGHGQVASTTRVVGT--VGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEG 572
            ++    +     +  G   + + APE  +  + S  +DV+ FG+++ E+ +     +  
Sbjct: 192 TKVLPQDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSP 251

Query: 573 KPNLVEMV----WELMVQGKLLDALDA--RLRAKGGFDEDEVERVLHLGLLCAYPDPRAR 626
               + M+       M+   L++ L    RL    G  ++    +  +   C   +   R
Sbjct: 252 PAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDE----IYMIMTECWNNNVNQR 307

Query: 627 PTMRQVVKVLE 637
           P+ R +   ++
Sbjct: 308 PSFRDLALRVD 318

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 3q32_A* 3rvg_A* 3tjc_A* 3tjd_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* 3io7_A* 3kck_A* 3jy9_A* Length = 295

 Score =  123 bits (312), Expect = 1e-31
 Identities = 61/282 (21%), Positives = 124/282 (43%), Gaps = 22/282 (7%)

Query: 369 ENVIGVGGNGKVYKGVL----EGGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLV 424
              +G G  G V         +  G  +AVK++ H  +   R F  EI  L  L+H ++V
Sbjct: 15  LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIV 74

Query: 425 GLRGWC-KREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHE 483
             +G C    + +L L+ +Y+  GSL  ++ +      +   + ++    +  G+ YL  
Sbjct: 75  KYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER--IDHIKLLQYTSQICKGMEYLG- 131

Query: 484 GWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRVVGT--VGYLAPEVF 541
              K+ +HRD+ + N+L++ E   ++GDFGL ++    +     +  G   + + APE  
Sbjct: 132 --TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYAPESL 189

Query: 542 SSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMV----WELMVQGKLLDALDA-- 595
           +  + S  +DV+ FG+++ E+ +     +      + M+       M+   L++ L    
Sbjct: 190 TESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNG 249

Query: 596 RLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLE 637
           RL    G  ++    +  +   C   +   RP+ R +   ++
Sbjct: 250 RLPRPDGCPDE----IYMIMTECWNNNVNQRPSFRDLALRVD 287

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens} Length = 613

 Score =  128 bits (324), Expect = 2e-31
 Identities = 67/292 (22%), Positives = 114/292 (39%), Gaps = 61/292 (20%)

Query: 369 ENVIGVGGNGKVYKGVLEGGGAEI--AVKRISHENDGGTR-AFLAEISSLGRLKHKSLVG 425
           +  +G G  G V +GV      +I  A+K +    +       + E   + +L +  +V 
Sbjct: 341 DIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVR 400

Query: 426 LRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGW 485
           L G C+ E  +LMLV +    G L K++        +       +L  V+ G+ YL E  
Sbjct: 401 LIGVCQAE--ALMLVMEMAGGGPLHKFLVGKREE--IPVSNVAELLHQVSMGMKYLEE-- 454

Query: 486 EKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRVVGT--VGYLAPEVFSS 543
            K  +HR++ + NVLL      ++ DFGL++  G      T R  G   + + APE  + 
Sbjct: 455 -KNFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINF 513

Query: 544 GRASTQTDVFGFGILILEVLS-GRRP------------IEEGK-----PNLVEMVWELMV 585
            + S+++DV+ +G+ + E LS G++P            IE+GK     P     ++ LM 
Sbjct: 514 RKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGKRMECPPECPPELYALMS 573

Query: 586 QGKLLDALDARLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLE 637
                                           C       RP    V + + 
Sbjct: 574 D-------------------------------CWIYKWEDRPDFLTVEQRMR 594

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A Length = 450

 Score =  126 bits (319), Expect = 2e-31
 Identities = 85/312 (27%), Positives = 133/312 (42%), Gaps = 47/312 (15%)

Query: 330 KRKQRRAREREEMEDWELEYWPHRITYQEIEAATKGFSEENVIGVGGNGKVYKGVLEGGG 389
                 A++      W L      +   +             IG G  G V  G   G  
Sbjct: 173 MEGTVAAQDEFYRSGWALN--MKELKLLQ------------TIGKGEFGDVMLGDYRG-- 216

Query: 390 AEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSL 449
            ++AVK I   ND   +AFLAE S + +L+H +LV L G    EKG L +V +YM  GSL
Sbjct: 217 NKVAVKCIK--NDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSL 274

Query: 450 DKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRL 509
             ++     S +L  +  ++   DV   + YL        +HRD+ + NVL+ ++   ++
Sbjct: 275 VDYLRSRGRS-VLGGDCLLKFSLDVCEAMEYLE---GNNFVHRDLAARNVLVSEDNVAKV 330

Query: 510 GDFGLARMHGHGQVASTTRVVGT---VGYLAPEVFSSGRASTQTDVFGFGILILEVLS-G 565
            DFGL +        +++        V + APE     + ST++DV+ FGIL+ E+ S G
Sbjct: 331 SDFGLTKE-------ASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFG 383

Query: 566 RRPIEEGKPNLVEMVWELMVQGKLLDALDARLRAKGGFDEDEVERVLHLGLLCAYPDPRA 625
           R P     P   + V   + +G  +DA            +     V  +   C + D   
Sbjct: 384 RVPY-PRIPL--KDVVPRVEKGYKMDA-----------PDGCPPAVYDVMKNCWHLDAAT 429

Query: 626 RPTMRQVVKVLE 637
           RPT  Q+ + LE
Sbjct: 430 RPTFLQLREQLE 441

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens} Length = 325

 Score =  123 bits (311), Expect = 3e-31
 Identities = 81/293 (27%), Positives = 132/293 (45%), Gaps = 61/293 (20%)

Query: 369 ENVIGVGGNGKVYKGVLEGGGAE---IAVKRISHENDGGTRA-FLAEISSLGRLKHKSLV 424
           E +IG G +G+V  G L   G     +A+K +        R  FL+E S +G+  H +++
Sbjct: 54  EKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNII 113

Query: 425 GLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEG 484
            L G   R +   M+V +YMENGSLD ++   DG    +  + + +L+ V AG+ YL + 
Sbjct: 114 RLEGVVTRGR-LAMIVTEYMENGSLDTFLRTHDGQ--FTIMQLVGMLRGVGAGMRYLSD- 169

Query: 485 WEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRVVGT--VGYLAPEVFS 542
                +HRD+ + NVL+D  +  ++ DFGL+R+      A+ T   G   + + APE  +
Sbjct: 170 --LGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWTAPEAIA 227

Query: 543 SGRASTQTDVFGFGILILEVLS-GRRP------------IEEGK-----PNLVEMVWELM 584
               S+ +DV+ FG+++ EVL+ G RP            +EEG            + +LM
Sbjct: 228 FRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSVEEGYRLPAPMGCPHALHQLM 287

Query: 585 VQGKLLDALDARLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLE 637
           +                                C + D   RP   Q+V VL+
Sbjct: 288 LD-------------------------------CWHKDRAQRPRFSQIVSVLD 309

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A* Length = 291

 Score =  122 bits (308), Expect = 4e-31
 Identities = 71/294 (24%), Positives = 121/294 (41%), Gaps = 63/294 (21%)

Query: 368 EENVIGVGGNGKVYKGVLEGGGAEI--AVKRISHENDGGTR--AFLAEISSLGRLKHKSL 423
           E+  +G G  G V KG  +        AVK + +E +        LAE + + +L +  +
Sbjct: 21  EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 80

Query: 424 VGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHE 483
           V + G C+ E  S MLV +  E G L+K++ Q      +  +  I ++  V+ G+ YL E
Sbjct: 81  VRMIGICEAE--SWMLVMEMAELGPLNKYLQQNRH---VKDKNIIELVHQVSMGMKYL-E 134

Query: 484 GWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRVVGT--VGYLAPEVF 541
             E   +HRD+ + NVLL  +   ++ DFGL++     +     +  G   V + APE  
Sbjct: 135 --ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECI 192

Query: 542 SSGRASTQTDVFGFGILILEVLS-GRRP------------IEEGK-----PNLVEMVWEL 583
           +  + S+++DV+ FG+L+ E  S G++P            +E+G+           +++L
Sbjct: 193 NYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPAGCPREMYDL 252

Query: 584 MVQGKLLDALDARLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLE 637
           M                                 C   D   RP    V   L 
Sbjct: 253 MNL-------------------------------CWTYDVENRPGFAAVELRLR 275

>1qmo_E Mannose binding lectin, FRIL; crosslink, hematopoietic progenitor, sugar complex; HET: MAN; 3.5A {Dolichos lab lab} SCOP: b.29.1.1 Length = 133

 Score =  117 bits (293), Expect = 6e-31
 Identities = 38/143 (26%), Positives = 60/143 (41%), Gaps = 30/143 (20%)

Query: 135 NHVFGVEFDVFKNQEFNDIDENHVGIDVNSLTSVSAHAAGYWPDNQTDSSGSNSNSGTGD 194
           ++V  VEFD + N ++ D +  H+GIDVNS+ S       +                   
Sbjct: 1   SNVVAVEFDTYLNPDYGDPNYIHIGIDVNSIRSKVTAKWDWQ------------------ 42

Query: 195 DEKSFKELKLNNGKNYQVWIDYADSFINITMVEAGMKRPKRPLLSVPLNLSGVLEDEMYV 254
                      NGK     I Y +S      V +     K   LS  + L  VL + + V
Sbjct: 43  -----------NGKIATAHISY-NSVSKRLSVTSYYAGSKPATLSYDIELHTVLPEWVRV 90

Query: 255 GFTAATGQLVESHKILAWSFSNT 277
           G +A+TGQ  E + + +WSF+++
Sbjct: 91  GLSASTGQDKERNTVHSWSFTSS 113

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* Length = 267

 Score =  121 bits (305), Expect = 7e-31
 Identities = 79/280 (28%), Positives = 123/280 (43%), Gaps = 29/280 (10%)

Query: 369 ENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRG 428
              IG G  G V+ G       ++A+K I  E       F+ E   + +L H  LV L G
Sbjct: 13  VQEIGSGQFGLVHLGYWLNKD-KVAIKTI-REGAMSEEDFIEEAEVMMKLSHPKLVQLYG 70

Query: 429 WCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKK 488
            C  +   + LV ++ME+G L  ++    G    + E  + +  DV  G+ YL E     
Sbjct: 71  VCLEQA-PICLVTEFMEHGCLSDYLRTQRGL--FAAETLLGMCLDVCEGMAYLEE---AC 124

Query: 489 VLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRVVGT---VGYLAPEVFSSGR 545
           V+HRD+ + N L+ +    ++ DFG+ R     Q    T   GT   V + +PEVFS  R
Sbjct: 125 VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQ---YTSSTGTKFPVKWASPEVFSFSR 181

Query: 546 ASTQTDVFGFGILILEVLS-GRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRAKGGFD 604
            S+++DV+ FG+L+ EV S G+ P  E + N    V E +  G  L              
Sbjct: 182 YSSKSDVWSFGVLMWEVFSEGKIPY-ENRSN--SEVVEDISTGFRLYK-----------P 227

Query: 605 EDEVERVLHLGLLCAYPDPRARPTMRQVVKVLEGKIEAGI 644
                 V  +   C    P  RP   ++++ L    E+G+
Sbjct: 228 RLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAESGL 267

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 3pjc_A* 1yvj_A* Length = 327

 Score =  122 bits (309), Expect = 7e-31
 Identities = 72/298 (24%), Positives = 125/298 (41%), Gaps = 21/298 (7%)

Query: 369 ENVIGVGGNGKVYKGVLEGGG----AEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLV 424
            + +G G  G V     +  G    A +AVK++ H      R F  EI  L  L    +V
Sbjct: 28  ISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIV 87

Query: 425 GLRGWCKREKG-SLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHE 483
             RG        SL LV +Y+ +G L  ++ +      L     +     +  G+ YL  
Sbjct: 88  KYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRAR--LDASRLLLYSSQICKGMEYLG- 144

Query: 484 GWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRVVGT--VGYLAPEVF 541
              ++ +HRD+ + N+L++ E + ++ DFGLA++    +     R  G   + + APE  
Sbjct: 145 --SRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESL 202

Query: 542 SSGRASTQTDVFGFGILILEVLS-GRRP--IEEGKPNLVEMVWELMVQGKLLDALDA--R 596
           S    S Q+DV+ FG+++ E+ +   +          ++    ++    +LL+ L+   R
Sbjct: 203 SDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALSRLLELLEEGQR 262

Query: 597 LRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLEGKIEAGIENETEDMDAY 654
           L A      +    V  L  LC  P P+ RP+   +   L+         ET    A+
Sbjct: 263 LPAPPACPAE----VHELMKLCWAPSPQDRPSFSALGPQLDMLWSGSRGCETHAFTAH 316

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 3fpq_A Length = 290

 Score =  121 bits (306), Expect = 8e-31
 Identities = 58/269 (21%), Positives = 110/269 (40%), Gaps = 30/269 (11%)

Query: 371 VIGVGGNGKVYKGVLEGGGAEIAVKRIS--HENDGGTRAFLAEISSLGRLKHKSLVGLRG 428
            IG G    VYKG+      E+A   +          + F  E   L  L+H ++V    
Sbjct: 33  EIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYD 92

Query: 429 -W--CKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIR-VLKDVAAGVLYLHEG 484
            W    + K  ++LV + M +G+L  ++ +    M     + +R   + +  G+ +LH  
Sbjct: 93  SWESTVKGKKCIVLVTELMTSGTLKTYLKRF-KVMK---IKVLRSWCRQILKGLQFLHTR 148

Query: 485 WEKKVLHRDIKSSNVLLDKEMNGR--LGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFS 542
               ++HRD+K  N+ +     G   +GD GLA +       +   V+GT  ++APE++ 
Sbjct: 149 -TPPIIHRDLKCDNIFIT-GPTGSVKIGDLGLATLKRASFAKA---VIGTPEFMAPEMYE 203

Query: 543 SGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRAKGG 602
                   DV+ FG+ +LE+ +   P  E +      ++  +  G    + D        
Sbjct: 204 EK-YDESVDVYAFGMCMLEMATSEYPYSECQNAAQ--IYRRVTSGVKPASFDKVA----- 255

Query: 603 FDEDEVERVLHLGLLCAYPDPRARPTMRQ 631
               EV+ ++     C   +   R +++ 
Sbjct: 256 --IPEVKEIIE---GCIRQNKDERYSIKD 279

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 333

 Score =  122 bits (308), Expect = 9e-31
 Identities = 77/277 (27%), Positives = 136/277 (49%), Gaps = 28/277 (10%)

Query: 369 ENVIGVGGNGKVYKGVLEGGGAE----IAVKRISHENDGGTRA-FLAEISSLGRLKHKSL 423
           + VIG G  G+VYKG+L+    +    +A+K +        R  FL E   +G+  H ++
Sbjct: 49  QKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNI 108

Query: 424 VGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHE 483
           + L G   + K  +M++ +YMENG+LDK++ + DG    S  + + +L+ +AAG+ YL  
Sbjct: 109 IRLEGVISKYK-PMMIITEYMENGALDKFLREKDGE--FSVLQLVGMLRGIAAGMKYLAN 165

Query: 484 GWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRVVGT--VGYLAPEVF 541
                 +HRD+ + N+L++  +  ++ DFGL+R+      A+ T   G   + + APE  
Sbjct: 166 ---MNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAI 222

Query: 542 SSGRASTQTDVFGFGILILEVLS-GRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRAK 600
           S  + ++ +DV+ FGI++ EV++ G RP      N    V + +  G  L          
Sbjct: 223 SYRKFTSASDVWSFGIVMWEVMTYGERPY-WELSN--HEVMKAINDGFRLPTP------- 272

Query: 601 GGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLE 637
                D    +  L + C   +   RP    +V +L+
Sbjct: 273 ----MDCPSAIYQLMMQCWQQERARRPKFADIVSILD 305

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} Length = 298

 Score =  121 bits (305), Expect = 1e-30
 Identities = 76/323 (23%), Positives = 130/323 (40%), Gaps = 43/323 (13%)

Query: 339 REEMEDWELEYWPHRITYQEIEAATKGFSEENVIGVGGNGKVYKGVLEGGGAE---IAVK 395
             E++D  + +         +            IG G  G VY G            A+K
Sbjct: 8   LAEVKDVLIPHERVVTHSDRV------------IGKGHFGVVYHGEYIDQAQNRIQCAIK 55

Query: 396 ---RISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDKW 452
              RI+        AFL E   +  L H +++ L G     +G   ++  YM +G L ++
Sbjct: 56  SLSRITEMQQ--VEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVLLPYMCHGDLLQF 113

Query: 453 IFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDF 512
           I     +   + ++ I     VA G+ YL    E+K +HRD+ + N +LD+    ++ DF
Sbjct: 114 IRSPQRN--PTVKDLISFGLQVARGMEYLA---EQKFVHRDLAARNCMLDESFTVKVADF 168

Query: 513 GLARMHGHGQVASTTRVVGT---VGYLAPEVFSSGRASTQTDVFGFGILILEVLS-GRRP 568
           GLAR     +  S  +       V + A E   + R +T++DV+ FG+L+ E+L+ G  P
Sbjct: 169 GLARDILDREYYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPP 228

Query: 569 IEEGKPNLVEMVWELMVQGKLLDALDARLRAKGGFDEDEVERVLHLGLLCAYPDPRARPT 628
                      +   + QG+ L              E   + +  +   C   DP  RPT
Sbjct: 229 Y-RHIDP--FDLTHFLAQGRRLPQP-----------EYCPDSLYQVMQQCWEADPAVRPT 274

Query: 629 MRQVVKVLEGKIEAGIENETEDM 651
            R +V  +E  + A + +    +
Sbjct: 275 FRVLVGEVEQIVSALLGDHYVQL 297

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ... Length = 373

 Score =  122 bits (309), Expect = 2e-30
 Identities = 74/276 (26%), Positives = 135/276 (48%), Gaps = 27/276 (9%)

Query: 369 ENVIGVGGNGKVYKGVLEGGGAE---IAVKRISHENDGGTRA-FLAEISSLGRLKHKSLV 424
           + V+G G  G+V  G L+    +   +A+K +        R  FL E S +G+  H +++
Sbjct: 50  DKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNII 109

Query: 425 GLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEG 484
            L G   + K  +M+V +YMENGSLD ++ + D     +  + + +L+ +A+G+ YL + 
Sbjct: 110 RLEGVVTKSK-PVMIVTEYMENGSLDSFLRKHDAQ--FTVIQLVGMLRGIASGMKYLSD- 165

Query: 485 WEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRVVGT--VGYLAPEVFS 542
                +HRD+ + N+L++  +  ++ DFGL R+      A+ T   G   + + +PE  +
Sbjct: 166 --MGYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKIPIRWTSPEAIA 223

Query: 543 SGRASTQTDVFGFGILILEVLS-GRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRAKG 601
             + ++ +DV+ +GI++ EV+S G RP      N  + V + + +G  L           
Sbjct: 224 YRKFTSASDVWSYGIVLWEVMSYGERPY-WEMSN--QDVIKAVDEGYRLPPP-------- 272

Query: 602 GFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLE 637
               D    +  L L C   D   RP   Q+V +L+
Sbjct: 273 ---MDCPAALYQLMLDCWQKDRNNRPKFEQIVSILD 305

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 3eyg_A* 3eyh_A* Length = 302

 Score =  120 bits (304), Expect = 2e-30
 Identities = 60/282 (21%), Positives = 120/282 (42%), Gaps = 22/282 (7%)

Query: 369 ENVIGVGGNGKVYKGVL----EGGGAEIAVKRI-SHENDGGTRAFLAEISSLGRLKHKSL 423
              +G G  GKV         +  G ++AVK +              EI  L  L H+++
Sbjct: 26  IRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENI 85

Query: 424 VGLRGWCKREKG-SLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLH 482
           V  +G C  + G  + L+ +++ +GSL +++ +      ++ +++++    +  G+ YL 
Sbjct: 86  VKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNK--INLKQQLKYAVQICKGMDYLG 143

Query: 483 EGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRVVGT--VGYLAPEV 540
               ++ +HRD+ + NVL++ E   ++GDFGL +     +   T +      V + APE 
Sbjct: 144 S---RQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEYYTVKDDRDSPVFWYAPEC 200

Query: 541 FSSGRASTQTDVFGFGILILEVLS-GRRPIEEGKPNLVEMVW--ELMVQGKLLDALDA-- 595
               +    +DV+ FG+ + E+L+            L  +      M   +L++ L    
Sbjct: 201 LMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTVTRLVNTLKEGK 260

Query: 596 RLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLE 637
           RL       ++    V  L   C    P  R + + +++  E
Sbjct: 261 RLPCPPNCPDE----VYQLMRKCWEFQPSNRTSFQNLIEGFE 298

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* Length = 371

 Score =  122 bits (306), Expect = 3e-30
 Identities = 37/298 (12%), Positives = 73/298 (24%), Gaps = 48/298 (16%)

Query: 371 VIGVGGNGKVYKGVLEGGGAEIAVKRI---SHENDGGTRAFLAEISSLGRLKHKSLVGLR 427
            + VG    V+         + A+K     +  +            +  RL  +S    R
Sbjct: 69  PLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEAR 128

Query: 428 GWCK-------------------------REKGSLMLVYDYMENGSLDKWIFQCD----G 458
              +                             + +L+        L+      D     
Sbjct: 129 DRRRLLLPSDAVAVQSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLDFVYVF 187

Query: 459 SMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMH 518
                      +   +      L     K ++H      N+ +  +    LGD       
Sbjct: 188 RGDEGILALHILTAQLIRLAANLQS---KGLVHGHFTPDNLFIMPDGRLMLGDVSALWKV 244

Query: 519 GHGQVASTTRVVGTVGYLAPEVFSSGRA--STQTDVFGFGILILEVLSGRRPIEEGKPNL 576
           G             V Y   E  ++  A  +   + +  G+ I  V     P     P +
Sbjct: 245 G----TRGPASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFLPFGLVTPGI 300

Query: 577 VEMVWELMVQGKLLDALDARLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVK 634
                   ++    D+L            D V+ ++    L    D R R    + ++
Sbjct: 301 KGSWKRPSLRVPGTDSLAFGSCTPLP---DFVKTLI-GRFLN--FDRRRRLLPLEAME 352

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A* Length = 676

 Score =  125 bits (315), Expect = 4e-30
 Identities = 61/227 (26%), Positives = 103/227 (45%), Gaps = 17/227 (7%)

Query: 371 VIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLA-EISSLGRLKHKSLVGLR-- 427
            +G GG G V + + +  G ++A+K+   E     R     EI  + +L H ++V  R  
Sbjct: 21  RLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREV 80

Query: 428 ---GWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEG 484
                        +L  +Y E G L K++ Q +    L       +L D+++ + YLHE 
Sbjct: 81  PDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHE- 139

Query: 485 WEKKVLHRDIKSSNVLLDKEMNGR---LGDFGLARMHGHGQVASTTRVVGTVGYLAPEVF 541
              +++HRD+K  N++L          + D G A+    G++ +    VGT+ YLAPE+ 
Sbjct: 140 --NRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTE--FVGTLQYLAPELL 195

Query: 542 SSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGK 588
              + +   D + FG L  E ++G RP     PN   + W   V+ K
Sbjct: 196 EQKKYTVTVDYWSFGTLAFECITGFRPFL---PNWQPVQWHGKVREK 239

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A Length = 303

 Score =  119 bits (301), Expect = 4e-30
 Identities = 57/226 (25%), Positives = 99/226 (43%), Gaps = 32/226 (14%)

Query: 366 FSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVG 425
           F E  V+G G  G+V K          A+K+I H  +      L+E+  L  L H+ +V 
Sbjct: 8   FEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEK-LSTILSEVMLLASLNHQYVVR 66

Query: 426 LRG-WCKRE-----------KGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKD 473
               W +R            K +L +  +Y ENG+L   I     ++    +E  R+ + 
Sbjct: 67  YYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLI--HSENLNQQRDEYWRLFRQ 124

Query: 474 VAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVAST------- 526
           +   + Y+H    + ++HRD+K  N+ +D+  N ++GDFGLA+                 
Sbjct: 125 ILEALSYIHS---QGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLP 181

Query: 527 ------TRVVGTVGYLAPEVFS-SGRASTQTDVFGFGILILEVLSG 565
                 T  +GT  Y+A EV   +G  + + D++  GI+  E++  
Sbjct: 182 GSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIYP 227

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} Length = 317

 Score =  120 bits (302), Expect = 5e-30
 Identities = 64/296 (21%), Positives = 110/296 (37%), Gaps = 30/296 (10%)

Query: 357 QEIEAATKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLG 416
             +    K +     +G GG   V        G   A+KRI             E     
Sbjct: 22  HMVIIDNKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHR 81

Query: 417 RLKHKSLVGLRGWCKREKGS---LMLVYDYMENGSLDKWIFQC-DGSMMLSCEERIRVLK 472
              H +++ L  +C RE+G+     L+  + + G+L   I +  D    L+ ++ + +L 
Sbjct: 82  LFNHPNILRLVAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLL 141

Query: 473 DVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRV--- 529
            +  G+  +H    K   HRD+K +N+LL  E    L D G           S   +   
Sbjct: 142 GICRGLEAIHA---KGYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQ 198

Query: 530 -----VGTVGYLAPEVF---SSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVW 581
                  T+ Y APE+F   S      +TDV+  G ++  ++ G  P +           
Sbjct: 199 DWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDM--VFQKGDSV 256

Query: 582 ELMVQGKLLDALDARLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLE 637
            L VQ +L      R           + ++L+  ++    DP  RP +  ++  LE
Sbjct: 257 ALAVQNQLSIPQSPRH-------SSALWQLLN-SMMT--VDPHQRPHIPLLLSQLE 302

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A* Length = 281

 Score =  119 bits (300), Expect = 5e-30
 Identities = 67/317 (21%), Positives = 116/317 (36%), Gaps = 74/317 (23%)

Query: 343 EDWELEYWPHRITYQEIEAATKGFSEENVIGVGGNGKVYKGVLEGGGAE---IAVKRISH 399
            D+E++    RI                 IG G  G V++G+          +A+K   +
Sbjct: 8   RDYEIQ--RERIELGRC------------IGEGQFGDVHQGIYMSPENPALAVAIKTCKN 53

Query: 400 E-NDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDG 458
             +D     FL E  ++ +  H  +V L G        + ++ +    G L  ++     
Sbjct: 54  CTSDSVREKFLQEALTMRQFDHPHIVKLIGVITEN--PVWIIMELCTLGELRSFLQVRKY 111

Query: 459 SMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMH 518
           S  L     I     ++  + YL     K+ +HRDI + NVL+      +LGDFGL+R  
Sbjct: 112 S--LDLASLILYAYQLSTALAYLES---KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM 166

Query: 519 GHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLS-GRRP--------- 568
                   ++    + ++APE  +  R ++ +DV+ FG+ + E+L  G +P         
Sbjct: 167 EDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDV 226

Query: 569 ---IEEGK-----PNLVEMVWELMVQGKLLDALDARLRAKGGFDEDEVERVLHLGLLCAY 620
              IE G+     PN    ++ LM +                               C  
Sbjct: 227 IGRIENGERLPMPPNCPPTLYSLMTK-------------------------------CWA 255

Query: 621 PDPRARPTMRQVVKVLE 637
            DP  RP   ++   L 
Sbjct: 256 YDPSRRPRFTELKAQLS 272

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ... Length = 279

 Score =  118 bits (299), Expect = 5e-30
 Identities = 74/290 (25%), Positives = 133/290 (45%), Gaps = 63/290 (21%)

Query: 369 ENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRG 428
              +G G  G+V+ G   G   ++AVK +  +      AFLAE + + +L+H+ LV L  
Sbjct: 18  VERLGAGQFGEVWMGYYNGHT-KVAVKSL-KQGSMSPDAFLAEANLMKQLQHQRLVRLYA 75

Query: 429 WCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKK 488
              +E   + ++ +YMENGSL  ++    G   L+  + + +   +A G+ ++ E   + 
Sbjct: 76  VVTQE--PIYIITEYMENGSLVDFLKTPSGIK-LTINKLLDMAAQIAEGMAFIEE---RN 129

Query: 489 VLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRVVGT---VGYLAPEVFSSGR 545
            +HRD++++N+L+   ++ ++ DFGLAR+    +    T   G    + + APE  + G 
Sbjct: 130 YIHRDLRAANILVSDTLSCKIADFGLARLIEDNE---YTAREGAKFPIKWTAPEAINYGT 186

Query: 546 ASTQTDVFGFGILILEVLS-GRRP------------IEEG----KPNLV-EMVWELMVQG 587
            + ++DV+ FGIL+ E+++ GR P            +E G    +P+   E +++LM   
Sbjct: 187 FTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELYQLM--- 243

Query: 588 KLLDALDARLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLE 637
                                        LC    P  RPT   +  VLE
Sbjct: 244 ----------------------------RLCWKERPEDRPTFDYLRSVLE 265

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* 2jiu_A* ... Length = 327

 Score =  120 bits (302), Expect = 5e-30
 Identities = 59/295 (20%), Positives = 118/295 (40%), Gaps = 66/295 (22%)

Query: 369 ENVIGVGGNGKVYKGVL--EGGGAEI--AVKRISHEN-DGGTRAFLAEISSLGRLKHKSL 423
             V+G G  G VYKG+   EG   +I  A+K +         +  L E   +  + +  +
Sbjct: 20  IKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHV 79

Query: 424 VGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHE 483
             L G C     ++ L+   M  G L  ++ +   +  +  +  +     +A G+ YL +
Sbjct: 80  CRLLGICLTS--TVQLITQLMPFGCLLDYVREHKDN--IGSQYLLNWCVQIAKGMNYLED 135

Query: 484 GWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRVVGT---VGYLAPEV 540
              ++++HRD+ + NVL+    + ++ DFGLA++ G  +        G    + ++A E 
Sbjct: 136 ---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE--GGKVPIKWMALES 190

Query: 541 FSSGRASTQTDVFGFGILILEVLS-GRRP------------IEEGK-----PNLVEMVWE 582
                 + Q+DV+ +G+ + E+++ G +P            +E+G+     P     V+ 
Sbjct: 191 ILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYM 250

Query: 583 LMVQGKLLDALDARLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLE 637
           +MV+                               C   D  +RP  R+++    
Sbjct: 251 IMVK-------------------------------CWMIDADSRPKFRELIIEFS 274

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A* Length = 336

 Score =  120 bits (302), Expect = 6e-30
 Identities = 61/250 (24%), Positives = 104/250 (41%), Gaps = 33/250 (13%)

Query: 333 QRRAREREEMEDWELEYWPHRITYQEIE--AATKGFSEENVIGVGGNGKVYKGVLEGGGA 390
            +  R   E ED E      ++   + E        + +  +G G  G+V++   +  G 
Sbjct: 25  AKLQRLGPETEDNEGVLLTEKLKPVDYEYREEVHWMTHQPRVGRGSFGEVHRMKDKQTGF 84

Query: 391 EIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLD 450
           + AVK++  E        + E+ +   L    +V L G   RE   + +  + +E GSL 
Sbjct: 85  QCAVKKVRLEV-----FRVEELVACAGLSSPRIVPLYG-AVREGPWVNIFMELLEGGSL- 137

Query: 451 KWIFQCDGSMMLSC----EERIRV-LKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEM 505
                  G ++       E+R    L     G+ YLH    +++LH D+K+ NVLL    
Sbjct: 138 -------GQLIKQMGCLPEDRALYYLGQALEGLEYLHT---RRILHGDVKADNVLLSS-- 185

Query: 506 NGR---LGDFGLA-RMHGHGQVASTTR---VVGTVGYLAPEVFSSGRASTQTDVFGFGIL 558
           +G    L DFG A  +   G   S      + GT  ++APEV        + D++    +
Sbjct: 186 DGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCM 245

Query: 559 ILEVLSGRRP 568
           +L +L+G  P
Sbjct: 246 MLHMLNGCHP 255

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A Length = 283

 Score =  118 bits (299), Expect = 6e-30
 Identities = 72/316 (22%), Positives = 131/316 (41%), Gaps = 77/316 (24%)

Query: 343 EDWELEYWPHRITYQEIEAATKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHEND 402
             WE++  P  +T+ +             +G G  G V  G   G   ++A+K I  E  
Sbjct: 17  GSWEID--PKDLTFLK------------ELGTGQFGVVKYGKWRGQ-YDVAIKMI-KEGS 60

Query: 403 GGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMML 462
                F+ E   +  L H+ LV L G C +++  + ++ +YM NG L  ++ +       
Sbjct: 61  MSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQR-PIFIITEYMANGCLLNYLREMRHR--F 117

Query: 463 SCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQ 522
             ++ + + KDV   + YL     K+ LHRD+ + N L++ +   ++ DFGL+R     +
Sbjct: 118 QTQQLLEMCKDVCEAMEYLES---KQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE 174

Query: 523 VASTTRVVGT---VGYLAPEVFSSGRASTQTDVFGFGILILEVLS-GRRP---------- 568
               T  VG+   V +  PEV    + S+++D++ FG+L+ E+ S G+ P          
Sbjct: 175 ---YTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETA 231

Query: 569 --IEEG----KPNLV-EMVWELMVQGKLLDALDARLRAKGGFDEDEVERVLHLGLLCAYP 621
             I +G    +P+L  E V+ +M                                 C + 
Sbjct: 232 EHIAQGLRLYRPHLASEKVYTIMYS-------------------------------CWHE 260

Query: 622 DPRARPTMRQVVKVLE 637
               RPT + ++  + 
Sbjct: 261 KADERPTFKILLSNIL 276

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B Length = 454

 Score =  122 bits (307), Expect = 9e-30
 Identities = 65/287 (22%), Positives = 124/287 (43%), Gaps = 57/287 (19%)

Query: 369 ENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRG 428
           E  +G G  G+V+         ++AVK +         AFLAE + +  L+H  LV L  
Sbjct: 193 EKKLGAGQFGEVWMATYNKHT-KVAVKTM-KPGSMSVEAFLAEANVMKTLQHDKLVKLHA 250

Query: 429 WCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKK 488
              +E   + ++ ++M  GSL  ++   +GS      + I     +A G+ ++ +   + 
Sbjct: 251 VVTKE--PIYIITEFMAKGSLLDFLKSDEGSK-QPLPKLIDFSAQIAEGMAFIEQ---RN 304

Query: 489 VLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRAST 548
            +HRD++++N+L+   +  ++ DFGLAR+    +  +       + + APE  + G  + 
Sbjct: 305 YIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTI 364

Query: 549 QTDVFGFGILILEVLS-GRRP------------IEEG----KPNLV-EMVWELMVQGKLL 590
           ++DV+ FGIL++E+++ GR P            +E G    +P    E ++ +M++    
Sbjct: 365 KSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYRMPRPENCPEELYNIMMR---- 420

Query: 591 DALDARLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLE 637
                                      C    P  RPT   +  VL+
Sbjct: 421 ---------------------------CWKNRPEERPTFEYIQSVLD 440

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A* Length = 281

 Score =  117 bits (296), Expect = 1e-29
 Identities = 66/296 (22%), Positives = 113/296 (38%), Gaps = 70/296 (23%)

Query: 369 ENVIGVGGNGKVYKGVLEGGGAE---IAVKRISHENDGGTR-AFLAEISSLGRLKHKSLV 424
             ++G G  G+VY+GV      E   +AVK    +     +  F++E   +  L H  +V
Sbjct: 17  NRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIV 76

Query: 425 GLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEG 484
            L G  + E     ++ +    G L  ++ +   S  L     +     +   + YL   
Sbjct: 77  KLIGIIEEE--PTWIIMELYPYGELGHYLERNKNS--LKVLTLVLYSLQICKAMAYLES- 131

Query: 485 WEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYL-----APE 539
                +HRDI   N+L+      +LGDFGL+R      +        +V  L     +PE
Sbjct: 132 --INCVHRDIAVRNILVASPECVKLGDFGLSRY-----IEDEDYYKASVTRLPIKWMSPE 184

Query: 540 VFSSGRASTQTDVFGFGILILEVLS-GRRP------------IEEG----KPNLV-EMVW 581
             +  R +T +DV+ F + + E+LS G++P            +E+G    KP+L   +++
Sbjct: 185 SINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLEKGDRLPKPDLCPPVLY 244

Query: 582 ELMVQGKLLDALDARLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLE 637
            LM +                               C   DP  RP   ++V  L 
Sbjct: 245 TLMTR-------------------------------CWDYDPSDRPRFTELVCSLS 269

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus} Length = 323

 Score =  118 bits (298), Expect = 2e-29
 Identities = 67/340 (19%), Positives = 128/340 (37%), Gaps = 62/340 (18%)

Query: 339 REEMEDWELEYWPHRITYQEIEAATKGFSEENVIGVGGNGKVYKGVLEGGGAE---IAVK 395
           +E++ED  +     + T               ++G G  G V +  L+        +AVK
Sbjct: 12  KEKLEDVLIP--EQQFTLGR------------MLGKGEFGSVREAQLKQEDGSFVKVAVK 57

Query: 396 --RISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKRE-----KGSLMLVYDYMENGS 448
             +           FL E + +    H  +  L G   R          M++  +M++G 
Sbjct: 58  MLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGD 117

Query: 449 LDKWIFQC---DGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEM 505
           L  ++      +    L  +  +R + D+A G+ YL     +  +HRD+ + N +L ++M
Sbjct: 118 LHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSS---RNFIHRDLAARNCMLAEDM 174

Query: 506 NGRLGDFGLAR---------MHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFG 556
              + DFGL+R              ++         V +LA E  +    +  +DV+ FG
Sbjct: 175 TVCVADFGLSRKIYSGDYYRQGCASKLP--------VKWLALESLADNLYTVHSDVWAFG 226

Query: 557 ILILEVLS-GRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRAKGGFDEDEVERVLHLG 615
           + + E+++ G+ P   G  N    ++  ++ G  L               +EV  ++   
Sbjct: 227 VTMWEIMTRGQTPY-AGIEN--AEIYNYLIGGNRLKQPP--------ECMEEVYDLM--- 272

Query: 616 LLCAYPDPRARPTMRQVVKVLEGKIEAGIENETEDMDAYL 655
             C   DP+ RP+   +   LE  +       T     Y+
Sbjct: 273 YQCWSADPKQRPSFTCLRMELENILGHLSVLSTSQDPLYI 312

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} PDB: 3sxr_A* Length = 268

 Score =  116 bits (294), Expect = 2e-29
 Identities = 73/290 (25%), Positives = 125/290 (43%), Gaps = 63/290 (21%)

Query: 369 ENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRG 428
              +G G  G V  G  +G   ++AVK I  E       F  E  ++ +L H  LV   G
Sbjct: 13  LKELGSGQFGVVKLGKWKGQ-YDVAVKMI-KEGSMSEDEFFQEAQTMMKLSHPKLVKFYG 70

Query: 429 WCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKK 488
            C +E   + +V +Y+ NG L  ++        L   + + +  DV  G+ +L      +
Sbjct: 71  VCSKEY-PIYIVTEYISNGCLLNYLRSHGKG--LEPSQLLEMCYDVCEGMAFLES---HQ 124

Query: 489 VLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRVVGT---VGYLAPEVFSSGR 545
            +HRD+ + N L+D+++  ++ DFG+ R     Q       VGT   V + APEVF   +
Sbjct: 125 FIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQ---YVSSVGTKFPVKWSAPEVFHYFK 181

Query: 546 ASTQTDVFGFGILILEVLS-GRRP------------IEEG----KPNLV-EMVWELMVQG 587
            S+++DV+ FGIL+ EV S G+ P            + +G    +P+L  + ++++M   
Sbjct: 182 YSSKSDVWAFGILMWEVFSLGKMPYDLYTNSEVVLKVSQGHRLYRPHLASDTIYQIMYS- 240

Query: 588 KLLDALDARLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLE 637
                                         C +  P  RPT +Q++  +E
Sbjct: 241 ------------------------------CWHELPEKRPTFQQLLSSIE 260

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B* Length = 291

 Score =  117 bits (295), Expect = 2e-29
 Identities = 61/281 (21%), Positives = 109/281 (38%), Gaps = 35/281 (12%)

Query: 369 ENVIGVGGNGKVYKGVLEGGGAE---IAVKRISHEN---DGGTRAFLAEISSLGRLKHKS 422
              +G G  G V +G  +    +   +AVK +  +          F+ E++++  L H++
Sbjct: 23  LEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRN 82

Query: 423 LVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLH 482
           L+ L G        + +V +    GSL   + +  G          R    VA G+ YL 
Sbjct: 83  LIRLYGVVLTP--PMKMVTELAPLGSLLDRLRKHQGH--FLLGTLSRYAVQVAEGMGYLE 138

Query: 483 EGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRVVGT--VGYLAPEV 540
               K+ +HRD+ + N+LL      ++GDFGL R           +        + APE 
Sbjct: 139 S---KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPES 195

Query: 541 FSSGRASTQTDVFGFGILILEVLS-GRRPIEEGKPNLVEMVWELMVQGKLLDALDA---R 596
             +   S  +D + FG+ + E+ + G+ P            W  +   ++L  +D    R
Sbjct: 196 LKTRTFSHASDTWMFGVTLWEMFTYGQEP------------WIGLNGSQILHKIDKEGER 243

Query: 597 LRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLE 637
           L       +D    + ++ + C    P  RPT   +   L 
Sbjct: 244 LPRPEDCPQD----IYNVMVQCWAHKPEDRPTFVALRDFLL 280

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A* Length = 325

 Score =  118 bits (297), Expect = 3e-29
 Identities = 67/295 (22%), Positives = 114/295 (38%), Gaps = 66/295 (22%)

Query: 369 ENVIGVGGNGKVYKGVL--EGGGAEI--AVKRI-SHENDGGTRAFLAEISSLGRLKHKSL 423
             V+G G  G V+KGV   EG   +I   +K I         +A    + ++G L H  +
Sbjct: 18  LKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHI 77

Query: 424 VGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHE 483
           V L G C     SL LV  Y+  GSL   + Q  G+  L  +  +     +A G+ YL E
Sbjct: 78  VRLLGLCPGS--SLQLVTQYLPLGSLLDHVRQHRGA--LGPQLLLNWGVQIAKGMYYLEE 133

Query: 484 GWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRVVGT---VGYLAPEV 540
                ++HR++ + NVLL      ++ DFG+A +                  + ++A E 
Sbjct: 134 ---HGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYS--EAKTPIKWMALES 188

Query: 541 FSSGRASTQTDVFGFGILILEVLS-GRRP------------IEEGK-----PNLVEMVWE 582
              G+ + Q+DV+ +G+ + E+++ G  P            +E+G+           V+ 
Sbjct: 189 IHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAEVPDLLEKGERLAQPQICTIDVYM 248

Query: 583 LMVQGKLLDALDARLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLE 637
           +MV+                               C   D   RPT +++     
Sbjct: 249 VMVK-------------------------------CWMIDENIRPTFKELANEFT 272

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens} Length = 319

 Score =  117 bits (296), Expect = 3e-29
 Identities = 61/295 (20%), Positives = 111/295 (37%), Gaps = 39/295 (13%)

Query: 371 VIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLA-EISSLGRLKHKSLVGLRG- 428
           ++G G    V++G  +  G   A+K  ++ +          E   L +L HK++V L   
Sbjct: 16  ILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAI 75

Query: 429 WCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKK 488
             +      +L+ ++   GSL   + +   +  L   E + VL+DV  G+ +L    E  
Sbjct: 76  EEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLR---ENG 132

Query: 489 VLHRDIKSSNVLL----DKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSG 544
           ++HR+IK  N++     D +   +L DFG AR     +   +  + GT  YL P+++   
Sbjct: 133 IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVS--LYGTEEYLHPDMYERA 190

Query: 545 RASTQT--------DVFGFGILILEVLSGRRP-IEEGKPNLVEMVWELMVQGKLLDALDA 595
                         D++  G+      +G  P      P   + V   ++ GK   A+  
Sbjct: 191 VLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKPSGAISG 250

Query: 596 RLRAKGGFDE----------------DEVERVLHLGLLCAYPDPRARPTMRQVVK 634
             +A+ G  +                  +  VL   +L A  D        Q   
Sbjct: 251 VQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVL-ANILEA--DQEKCWGFDQFFA 302

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* Length = 360

 Score =  118 bits (297), Expect = 4e-29
 Identities = 71/337 (21%), Positives = 139/337 (41%), Gaps = 53/337 (15%)

Query: 329 IKRKQRRAREREEMEDWELEYWPHRITYQEIEAATKGFSEENVIGVGGNGKVYKGVLEGG 388
           ++  +   ++R+ +E +  +        +  E     F + + +G G  G V+K   +  
Sbjct: 4   LEELELDEQQRKRLEAFLTQKQ------KVGELKDDDFEKISELGAGNGGVVFKVSHKPS 57

Query: 389 GAEIAVKRISHENDGGTRAFLA-EISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENG 447
           G  +A K I  E     R  +  E+  L       +VG  G    + G + +  ++M+ G
Sbjct: 58  GLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSD-GEISICMEHMDGG 116

Query: 448 SLDKWIFQCDGSMMLSCEERI--RVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEM 505
           SLD+ + +  G +     E+I  +V   V  G+ YL E  + K++HRD+K SN+L++   
Sbjct: 117 SLDQ-VLKKAGRI----PEQILGKVSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRG 169

Query: 506 NGRLGDFGLARMHGHGQVASTTR--VVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVL 563
             +L DFG++     GQ+  +     VGT  Y++PE       S Q+D++  G+ ++E+ 
Sbjct: 170 EIKLCDFGVS-----GQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMA 224

Query: 564 SGRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRAKGGFDEDEVERVLHLGLL------ 617
            GR PI       +E+++   V+G   +            ++  ++    + +       
Sbjct: 225 VGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLNKFGMDSRPPMAIFELLDYI 284

Query: 618 -----------------------CAYPDPRARPTMRQ 631
                                  C   +P  R  ++Q
Sbjct: 285 VNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQ 321

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens} Length = 396

 Score =  119 bits (299), Expect = 4e-29
 Identities = 61/298 (20%), Positives = 112/298 (37%), Gaps = 39/298 (13%)

Query: 371 VIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTR-AFLAEISSLGRLKHKSLVGLRG- 428
           ++G G    V++G  +  G   A+K  ++ +        + E   L +L HK++V L   
Sbjct: 16  ILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAI 75

Query: 429 WCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKK 488
             +      +L+ ++   GSL   + +   +  L   E + VL+DV  G+ +L    E  
Sbjct: 76  EEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLR---ENG 132

Query: 489 VLHRDIKSSNVLL----DKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSG 544
           ++HR+IK  N++     D +   +L DFG AR     +   +  + GT  YL P+++   
Sbjct: 133 IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVS--LYGTEEYLHPDMYERA 190

Query: 545 RASTQT--------DVFGFGILILEVLSGRRP-IEEGKPNLVEMVWELMVQGKLLDALDA 595
                         D++  G+      +G  P      P   + V   ++ GK   A+  
Sbjct: 191 VLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKPSGAISG 250

Query: 596 RLRAKGGFDE----------------DEVERVLHLGLLCAYPDPRARPTMRQVVKVLE 637
             +A+ G  +                  +  VL   +L A  D        Q      
Sbjct: 251 VQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLA-NILEA--DQEKCWGFDQFFAETS 305

>1nls_A Concanavalin A; lectin, agglutinin; 0.94A {Canavalia ensiformis} SCOP: b.29.1.1 PDB: 1bxh_A* 1apn_A 1ces_A 1cjp_A* 1c57_A 1cvn_A* 1con_A 1dq1_A 1dq2_A 1dq4_A 1dq5_A 1dq6_A 1enq_A 1enr_A 1ens_A 1gic_A* 1dq0_A 1hqw_A 1gkb_A* 1i3h_A ... Length = 237

 Score =  114 bits (287), Expect = 4e-29
 Identities = 32/146 (21%), Positives = 55/146 (37%), Gaps = 30/146 (20%)

Query: 134 SNHVFGVEFDVFKNQEFNDIDENHVGIDVNSLTSVSAHAAGYWPDNQTDSSGSNSNSGTG 193
           ++ +  VE D + N +  D    H+GID+ S+ S                          
Sbjct: 1   ADTIVAVELDTYPNTDIGDPSYPHIGIDIKSVRSKKTA---------------------- 38

Query: 194 DDEKSFKELKLNNGKNYQVWIDYADSFINITMVEAGMKRPKRPLLSVPLNLSGVLEDEMY 253
                  +  + NGK     I Y +S                  +S  ++L  VL + + 
Sbjct: 39  -------KWNMQNGKVGTAHIIY-NSVDKRLSAVVSYPNADSATVSYDVDLDNVLPEWVR 90

Query: 254 VGFTAATGQLVESHKILAWSFSNTKF 279
           VG +A+TG   E++ IL+WSF++   
Sbjct: 91  VGLSASTGLYKETNTILSWSFTSKLK 116

>1nls_A Concanavalin A; lectin, agglutinin; 0.94A {Canavalia ensiformis} SCOP: b.29.1.1 PDB: 1bxh_A* 1apn_A 1ces_A 1cjp_A* 1c57_A 1cvn_A* 1con_A 1dq1_A 1dq2_A 1dq4_A 1dq5_A 1dq6_A 1enq_A 1enr_A 1ens_A 1gic_A* 1dq0_A 1hqw_A 1gkb_A* 1i3h_A ... Length = 237

 Score = 66.0 bits (160), Expect = 3e-12
 Identities = 22/109 (20%), Positives = 37/109 (33%), Gaps = 9/109 (8%)

Query: 28  FVFNGFNSSNLSLYGTATVESRILTLTNST------TFTIGRALYPSKIPTKRPNSSYVY 81
             F+      +      T     L LT  +        ++GRAL+ + +     +S+ V 
Sbjct: 131 NQFSKDQKDLILQGDATTGTDGNLELTRVSSNGSPQGSSVGRALFYAPVHI-WESSAVVA 189

Query: 82  PFSTSFIFAMAPYKGVLAGHGLVFLFVPFH-GIKGATEAQHLGLFNRTN 129
            F  +F F +          G+ F        I   +  + LGLF   N
Sbjct: 190 SFEATFTFLIKSPDSH-PADGIAFFISNIDSSIPSGSTGRLLGLFPDAN 237

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A* Length = 313

 Score =  116 bits (294), Expect = 5e-29
 Identities = 65/326 (19%), Positives = 133/326 (40%), Gaps = 61/326 (18%)

Query: 339 REEMEDWELEYWPHRITYQEIEAATKGFSEENVIGVGGNGKVYKGVLEGGGAE---IAVK 395
           + ++ED  ++   + +   +            ++G G  G V +G L+        +AVK
Sbjct: 23  QNKLEDVVID--RNLLILGK------------ILGEGEFGSVMEGNLKQEDGTSLKVAVK 68

Query: 396 RISHEN--DGGTRAFLAEISSLGRLKHKSLVGLRGWCKRE----KGSLMLVYDYMENGSL 449
            +  +N        FL+E + +    H +++ L G C           M++  +M+ G L
Sbjct: 69  TMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSSQGIPKPMVILPFMKYGDL 128

Query: 450 DKWIFQC---DGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMN 506
             ++       G   +  +  ++ + D+A G+ YL     +  LHRD+ + N +L  +M 
Sbjct: 129 HTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSN---RNFLHRDLAARNCMLRDDMT 185

Query: 507 GRLGDFGLAR---------MHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGI 557
             + DFGL++              ++         V ++A E  +    ++++DV+ FG+
Sbjct: 186 VCVADFGLSKKIYSGDYYRQGRIAKMP--------VKWIAIESLADRVYTSKSDVWAFGV 237

Query: 558 LILEVLS-GRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRAKGGFDEDEVERVLHLGL 616
            + E+ + G  P   G  N    +++ ++ G  L              ED ++ +  +  
Sbjct: 238 TMWEIATRGMTPY-PGVQN--HEMYDYLLHGHRLKQ-----------PEDCLDELYEIMY 283

Query: 617 LCAYPDPRARPTMRQVVKVLEGKIEA 642
            C   DP  RPT   +   LE  +E+
Sbjct: 284 SCWRTDPLDRPTFSVLRLQLEKLLES 309

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A* Length = 289

 Score =  114 bits (288), Expect = 2e-28
 Identities = 59/308 (19%), Positives = 113/308 (36%), Gaps = 88/308 (28%)

Query: 369 ENVIGVGGNGKVYKGVLEGGGA-------EIAVKRISHENDGGTRAFLAEISSLGRLKHK 421
              +G G   K++KGV    G        E+ +K +   +   + +F    S + +L HK
Sbjct: 13  NESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHK 72

Query: 422 SLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYL 481
            LV   G C       +LV ++++ GSLD ++ +      ++   ++ V K +AA + +L
Sbjct: 73  HLVLNYGVCVCGD-ENILVQEFVKFGSLDTYLKKNKNC--INILWKLEVAKQLAAAMHFL 129

Query: 482 HEGWEKKVLHRDIKSSNVLLDKEMNGR--------LGDFGLARMHGHGQVASTTRVVGTV 533
               E  ++H ++ + N+LL +E + +        L D G++             V+   
Sbjct: 130 E---ENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISIT-----------VLPKD 175

Query: 534 GY------LAPEVFSSGRA-STQTDVFGFGILILEVLS-GRRP------------IEEG- 572
                   + PE   + +  +  TD + FG  + E+ S G +P             E+  
Sbjct: 176 ILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQRKLQFYEDRH 235

Query: 573 ---KPNLVEMVWELMVQGKLLDALDARLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTM 629
               P   E +  L+                                 C   +P  RP+ 
Sbjct: 236 QLPAPKAAE-LANLINN-------------------------------CMDYEPDHRPSF 263

Query: 630 RQVVKVLE 637
           R +++ L 
Sbjct: 264 RAIIRDLN 271

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A* Length = 656

 Score =  119 bits (301), Expect = 2e-28
 Identities = 70/318 (22%), Positives = 119/318 (37%), Gaps = 31/318 (9%)

Query: 330 KRKQRRAREREEMEDWELEYWPHRITYQEIEAATKGFSEENV-----IGVGGNGKVYKGV 384
           K+  R         D   E      TY            E +     IG G  G V++G+
Sbjct: 351 KQGVRSHTVSVSETDDYAEIIDEEDTYTMPSTRDYEIQRERIELGRCIGEGQFGDVHQGI 410

Query: 385 L---EGGGAEIAVKRISHE-NDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLV 440
               E     +A+K   +  +D     FL E  ++ +  H  +V L G        + ++
Sbjct: 411 YMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITEN--PVWII 468

Query: 441 YDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVL 500
            +    G L  ++     S  L     I     ++  + YL     K+ +HRDI + NVL
Sbjct: 469 MELCTLGELRSFLQVRKFS--LDLASLILYAYQLSTALAYLES---KRFVHRDIAARNVL 523

Query: 501 LDKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILIL 560
           +      +LGDFGL+R          ++    + ++APE  +  R ++ +DV+ FG+ + 
Sbjct: 524 VSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMW 583

Query: 561 EVLS-GRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRAKGGFDEDEVERVLHLGLLCA 619
           E+L  G +P  +G  N    V   +  G+ L               +    +  L   C 
Sbjct: 584 EILMHGVKPF-QGVKN--NDVIGRIENGERLPMP-----------PNCPPTLYSLMTKCW 629

Query: 620 YPDPRARPTMRQVVKVLE 637
             DP  RP   ++   L 
Sbjct: 630 AYDPSRRPRFTELKAQLS 647

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A* Length = 327

 Score =  113 bits (286), Expect = 7e-28
 Identities = 72/321 (22%), Positives = 124/321 (38%), Gaps = 69/321 (21%)

Query: 343 EDWELEYWPHRITYQEIEAATKGFSEENVIGVGGNGKVYKGVLEGGGAE-----IAVKRI 397
           +  E+      IT                +G G  G+VY+G + G   +     +AVK +
Sbjct: 23  DLKEVP--RKNITLIR------------GLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTL 68

Query: 398 SHENDGGTRA----FLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWI 453
               +  +      FL E   + +  H+++V   G   +      ++ + M  G L  ++
Sbjct: 69  ---PEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQS-LPRFILMELMAGGDLKSFL 124

Query: 454 FQCDGSMM----LSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRL 509
            +          L+  + + V +D+A G  YL E      +HRDI + N LL     GR+
Sbjct: 125 RETRPRPSQPSSLAMLDLLHVARDIACGCQYLEE---NHFIHRDIAARNCLLTCPGPGRV 181

Query: 510 ---GDFGLAR---------MHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGI 557
              GDFG+AR           G   +         V ++ PE F  G  +++TD + FG+
Sbjct: 182 AKIGDFGMARDIYRASYYRKGGCAMLP--------VKWMPPEAFMEGIFTSKTDTWSFGV 233

Query: 558 LILEVLS-GRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRAKGGFDEDEVERVLHLGL 616
           L+ E+ S G  P    K N  + V E +  G  +D             ++    V  +  
Sbjct: 234 LLWEIFSLGYMPY-PSKSN--QEVLEFVTSGGRMDPP-----------KNCPGPVYRIMT 279

Query: 617 LCAYPDPRARPTMRQVVKVLE 637
            C    P  RP    +++ +E
Sbjct: 280 QCWQHQPEDRPNFAIILERIE 300

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis} Length = 309

 Score =  113 bits (284), Expect = 1e-27
 Identities = 48/205 (23%), Positives = 87/205 (42%), Gaps = 14/205 (6%)

Query: 369 ENVIGVGGNGKVYKGVLEGGGAEIAVK--RISHENDGGTRA-FLAEISSLGRLKHKSLVG 425
             ++G GG G VY+         +A+K    +  +D   R     E  + GRL+   +V 
Sbjct: 39  RRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVP 98

Query: 426 L--RGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHE 483
           +   G      G L +    +    L   + +  G   L+    + +++ + + +   H 
Sbjct: 99  IHDFG---EIDGQLYVDMRLINGVDLAAMLRR-QGP--LAPPRAVAIVRQIGSALDAAHA 152

Query: 484 GWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSS 543
                  HRD+K  N+L+  +    L DFG+A      ++      VGT+ Y+APE FS 
Sbjct: 153 ---AGATHRDVKPENILVSADDFAYLVDFGIASATTDEKLTQLGNTVGTLYYMAPERFSE 209

Query: 544 GRASTQTDVFGFGILILEVLSGRRP 568
             A+ + D++    ++ E L+G  P
Sbjct: 210 SHATYRADIYALTCVLYECLTGSPP 234

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} Length = 432

 Score =  115 bits (290), Expect = 1e-27
 Identities = 66/283 (23%), Positives = 123/283 (43%), Gaps = 39/283 (13%)

Query: 366 FSEENVIGVGGNGK-VYKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRL-KHKSL 423
           F  ++V+G G  G  VY+G+ +    ++AVKRI  E          E+  L    +H ++
Sbjct: 26  FCPKDVLGHGAEGTIVYRGMFDNR--DVAVKRILPECFSFADR---EVQLLRESDEHPNV 80

Query: 424 VGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHE 483
           +      K  +    +  +     +L +++ Q D +      E I +L+   +G+ +LH 
Sbjct: 81  IRYFCTEKDRQ-FQYIAIELCA-ATLQEYVEQKDFA--HLGLEPITLLQQTTSGLAHLHS 136

Query: 484 GWEKKVLHRDIKSSNVLL-----DKEMNGRLGDFGLARMHGHGQVASTTR--VVGTVGYL 536
                ++HRD+K  N+L+       ++   + DFGL +    G+ + + R  V GT G++
Sbjct: 137 ---LNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTEGWI 193

Query: 537 APEVFSS---GRASTQTDVFGFGILILEVLSGRRPIEEGKP--NLVEMVWELMVQGKLLD 591
           APE+ S       +   D+F  G +   V+S         P    ++    +++    LD
Sbjct: 194 APEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSH-----PFGKSLQRQANILLGACSLD 248

Query: 592 ALDARLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVK 634
            L           ED + R L   ++    DP+ RP+ + V+K
Sbjct: 249 CLHPEK------HEDVIARELIEKMIA--MDPQKRPSAKHVLK 283

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A* Length = 327

 Score =  113 bits (284), Expect = 1e-27
 Identities = 77/324 (23%), Positives = 135/324 (41%), Gaps = 68/324 (20%)

Query: 345 WELEYWPHRITYQEIEAATKGFSEENVIGVGGNGKVYKGVLEGGGAEI--AVKRISHEND 402
             L+   + I +Q+            VIG G  G+V K  ++  G  +  A+KR+    +
Sbjct: 20  PVLD--WNDIKFQD------------VIGEGNFGQVLKARIKKDGLRMDAAIKRM---KE 62

Query: 403 GGT----RAFLAEISSLGRL-KHKSLVGLRGWCKREKGSLMLVYDYMENGSLDKW----- 452
             +    R F  E+  L +L  H +++ L G C+   G L L  +Y  +G+L  +     
Sbjct: 63  YASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHR-GYLYLAIEYAPHGNLLDFLRKSR 121

Query: 453 --------IFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKE 504
                         +  LS ++ +    DVA G+ YL +   K+ +HRD+ + N+L+ + 
Sbjct: 122 VLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQ---KQFIHRDLAARNILVGEN 178

Query: 505 MNGRLGDFGLARMHGHGQVASTTRVVGTVGYL-----APEVFSSGRASTQTDVFGFGILI 559
              ++ DFGL+R            V  T+G L     A E  +    +T +DV+ +G+L+
Sbjct: 179 YVAKIADFGLSR-------GQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLL 231

Query: 560 LEVLS-GRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRAKGGFDEDEVERVLHLGLLC 618
            E++S G  P   G       ++E + QG  L+              +  + V  L   C
Sbjct: 232 WEIVSLGGTPY-CGMTC--AELYEKLPQGYRLEK-----------PLNCDDEVYDLMRQC 277

Query: 619 AYPDPRARPTMRQVVKVLEGKIEA 642
               P  RP+  Q++  L   +E 
Sbjct: 278 WREKPYERPSFAQILVSLNRMLEE 301

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* Length = 318

 Score =  112 bits (283), Expect = 1e-27
 Identities = 70/282 (24%), Positives = 118/282 (41%), Gaps = 24/282 (8%)

Query: 369 ENVIGVGGNGKVYKGVL----EGGGAEIAVKRI-SHENDGGTRAFLAEISSLGRLKHKSL 423
              +G G  GKV         +G G  +AVK + +         +  EI  L  L H+ +
Sbjct: 36  IRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHI 95

Query: 424 VGLRGWCKREKG-SLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLH 482
           +  +G C+     SL LV +Y+  GSL  ++ +      +   + +   + +  G+ YLH
Sbjct: 96  IKYKGCCEDAGAASLQLVMEYVPLGSLRDYLPRHS----IGLAQLLLFAQQICEGMAYLH 151

Query: 483 EGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRVVGT--VGYLAPEV 540
               +  +HRD+ + NVLLD +   ++GDFGLA+    G      R  G   V + APE 
Sbjct: 152 A---QHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPEC 208

Query: 541 FSSGRASTQTDVFGFGILILEVLS-GRRPIEEGKPNLVEMV--WELMVQGKLLDALDA-- 595
               +    +DV+ FG+ + E+L+            L  +      M   +L + L+   
Sbjct: 209 LKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLERGE 268

Query: 596 RLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLE 637
           RL       +     V HL   C   +   RPT   ++ +L+
Sbjct: 269 RLPRP----DKCPAEVYHLMKNCWETEASFRPTFENLIPILK 306

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens} Length = 367

 Score =  113 bits (284), Expect = 3e-27
 Identities = 72/321 (22%), Positives = 124/321 (38%), Gaps = 69/321 (21%)

Query: 343 EDWELEYWPHRITYQEIEAATKGFSEENVIGVGGNGKVYKGVLEGGGAE-----IAVKRI 397
           +  E+      IT                +G G  G+VY+G + G   +     +AVK +
Sbjct: 64  DLKEVP--RKNITLIR------------GLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTL 109

Query: 398 SHENDGGT----RAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWI 453
               +  +      FL E   + +  H+++V   G   +      ++ + M  G L  ++
Sbjct: 110 ---PEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQS-LPRFILLELMAGGDLKSFL 165

Query: 454 FQCDGSMM----LSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRL 509
            +          L+  + + V +D+A G  YL E      +HRDI + N LL     GR+
Sbjct: 166 RETRPRPSQPSSLAMLDLLHVARDIACGCQYLEE---NHFIHRDIAARNCLLTCPGPGRV 222

Query: 510 ---GDFGLAR---------MHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGI 557
              GDFG+AR           G   +         V ++ PE F  G  +++TD + FG+
Sbjct: 223 AKIGDFGMARDIYRAGYYRKGGCAMLP--------VKWMPPEAFMEGIFTSKTDTWSFGV 274

Query: 558 LILEVLS-GRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRAKGGFDEDEVERVLHLGL 616
           L+ E+ S G  P    K N  + V E +  G  +D             ++    V  +  
Sbjct: 275 LLWEIFSLGYMPY-PSKSN--QEVLEFVTSGGRMDPP-----------KNCPGPVYRIMT 320

Query: 617 LCAYPDPRARPTMRQVVKVLE 637
            C    P  RP    +++ +E
Sbjct: 321 QCWQHQPEDRPNFAIILERIE 341

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ... Length = 322

 Score =  112 bits (281), Expect = 3e-27
 Identities = 72/345 (20%), Positives = 144/345 (41%), Gaps = 75/345 (21%)

Query: 343 EDWELEYWPHRITYQEIEAATKGFSEENVIGVGGNGKVYKGVLEGGGAE-----IAVKRI 397
           ++WE+     +IT                +G G  G VY+GV +G   +     +A+K +
Sbjct: 18  DEWEVA--REKITMSR------------ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTV 63

Query: 398 SHENDGGTRA-FLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQC 456
           +       R  FL E S +       +V L G   +     +++ + M  G L  ++   
Sbjct: 64  NEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQG-QPTLVIMELMTRGDLKSYLRSL 122

Query: 457 -------DGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRL 509
                        S  + I++  ++A G+ YL+     K +HRD+ + N ++ ++   ++
Sbjct: 123 RPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNA---NKFVHRDLAARNCMVAEDFTVKI 179

Query: 510 GDFGLAR---------MHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILIL 560
           GDFG+ R           G G +         V +++PE    G  +T +DV+ FG+++ 
Sbjct: 180 GDFGMTRDIYETDYYRKGGKGLLP--------VRWMSPESLKDGVFTTYSDVWSFGVVLW 231

Query: 561 EVLS-GRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRAKGGFDEDEVERVLHLGLLCA 619
           E+ +   +P + G  N  E V   +++G LLD             ++  + +  L  +C 
Sbjct: 232 EIATLAEQPYQ-GLSN--EQVLRFVMEGGLLDKP-----------DNCPDMLFELMRMCW 277

Query: 620 YPDPRARPTMRQVVKVLEGKIEAGIEN------------ETEDMD 652
             +P+ RP+  +++  ++ ++E G               E E++D
Sbjct: 278 QYNPKMRPSFLEIISSIKEEMEPGFREVSFYYSEENKLPEPEELD 322

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens} Length = 329

 Score =  112 bits (281), Expect = 4e-27
 Identities = 65/317 (20%), Positives = 127/317 (40%), Gaps = 61/317 (19%)

Query: 345 WELEYWPHRITYQEIEAATKGFSEENVIGVGGNGKVYKGVLEG---GGAEI--AVKRISH 399
             ++     I  +              +G G  GKV+            ++  AVK +  
Sbjct: 36  HHIK--RRDIVLKW------------ELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKE 81

Query: 400 ENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGS 459
            ++   + F  E   L  L+H+ +V   G C      L++V++YM +G L++++      
Sbjct: 82  ASESARQDFQREAELLTMLQHQHIVRFFGVCTEG-RPLLMVFEYMRHGDLNRFLRSHGPD 140

Query: 460 MM------------LSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNG 507
                         L   + + V   VAAG++YL        +HRD+ + N L+ + +  
Sbjct: 141 AKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAG---LHFVHRDLATRNCLVGQGLVV 197

Query: 508 RLGDFGLAR-MHGHGQVASTTRVVGTVGYL-----APEVFSSGRASTQTDVFGFGILILE 561
           ++GDFG++R ++         R VG    L      PE     + +T++DV+ FG+++ E
Sbjct: 198 KIGDFGMSRDIYS----TDYYR-VGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWE 252

Query: 562 VLS-GRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRAKGGFDEDEVERVLHLGLLCAY 620
           + + G++P      N      + + QG+ L+                   V  +   C  
Sbjct: 253 IFTYGKQPW-YQLSN--TEAIDCITQGRELER-----------PRACPPEVYAIMRGCWQ 298

Query: 621 PDPRARPTMRQVVKVLE 637
            +P+ R +++ V   L+
Sbjct: 299 REPQQRHSIKDVHARLQ 315

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} Length = 413

 Score =  112 bits (281), Expect = 9e-27
 Identities = 39/302 (12%), Positives = 75/302 (24%), Gaps = 61/302 (20%)

Query: 371 VIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRA---FLAEISSLGRLKHKSLVGLR 427
           V+G        +   +  G    V          + A      E+  L  L+        
Sbjct: 85  VLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQA 144

Query: 428 GWCKR--------EKGSLMLVYDYMENGSLDKWI---------FQCDGSMM--------- 461
               R        +      +     +   D W+          Q +             
Sbjct: 145 KVHLRFIFPFDLVKDPQKKKMIRVRLDER-DMWVLSRFFLYPRMQSNLQTFGEVLLSHSS 203

Query: 462 ----LSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARM 517
               L    R+++   V   +  LH      ++H  ++  +++LD+     L  F     
Sbjct: 204 THKSLVHHARLQLTLQVIRLLASLHH---YGLVHTYLRPVDIVLDQRGGVFLTGFEHLVR 260

Query: 518 HGHGQVASTTRVVGTVGYLAPEVFSSGRASTQ-----TDVFGFGILILEVLSGRRPIEEG 572
            G   V+   R        A  +   G+          D +  G+ I  +     P  + 
Sbjct: 261 DGASAVSPIGRGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYWIWCADLPNTDD 320

Query: 573 KPNLVEMVWELMVQGKLLDALDARLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQV 632
                            L   +   R+     +  V  +L  G L        R    Q 
Sbjct: 321 AA---------------LGGSEWIFRSCKNIPQ-PVRALLE-GFLR--YPKEDRLLPLQA 361

Query: 633 VK 634
           ++
Sbjct: 362 ME 363

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp} Length = 294

 Score =  109 bits (275), Expect = 1e-26
 Identities = 52/212 (24%), Positives = 86/212 (40%), Gaps = 34/212 (16%)

Query: 372 IGVGGNGKVYKGVLEGGGAEIAVK--RISHENDGGTRA-FLAEISSLGRLKHKSLVGLRG 428
           +G GG   VY         ++A+K   I       T   F  E+ +  +L H+++V    
Sbjct: 19  LGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVS--- 75

Query: 429 WCKREKGSLMLVYDY----------ME--NGSLDKWIFQCDGSMMLSCEERIRVLKDVAA 476
                      + D           ME   G       +  G   LS +  I     +  
Sbjct: 76  -----------MIDVDEEDDCYYLVMEYIEGPTLSEYIESHGP--LSVDTAINFTNQILD 122

Query: 477 GVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYL 536
           G+ + H+    +++HRDIK  N+L+D     ++ DFG+A+      +  T  V+GTV Y 
Sbjct: 123 GIKHAHD---MRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQTNHVLGTVQYF 179

Query: 537 APEVFSSGRASTQTDVFGFGILILEVLSGRRP 568
           +PE          TD++  GI++ E+L G  P
Sbjct: 180 SPEQAKGEATDECTDIYSIGIVLYEMLVGEPP 211

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A Length = 292

 Score =  108 bits (272), Expect = 3e-26
 Identities = 59/208 (28%), Positives = 100/208 (48%), Gaps = 13/208 (6%)

Query: 366 FSEENVIGVGGNGKVYKGVLEGGGAEIAVKRI--SHENDGGTRAFLAEISSLGRLKHKSL 423
           + +   IG G  G V+K         +A+KR+    +++G   + L EI  L  LKHK++
Sbjct: 4   YEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNI 63

Query: 424 VGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIR-VLKDVAAGVLYLH 482
           V L          L LV+++ +   L K+   C+G +       ++  L  +  G+ + H
Sbjct: 64  VRLHD-VLHSDKKLTLVFEFCDQ-DLKKYFDSCNGDLDPE---IVKSFLFQLLKGLGFCH 118

Query: 483 EGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEV-F 541
                 VLHRD+K  N+L+++    +L +FGLAR  G      +  VV T+ Y  P+V F
Sbjct: 119 SRN---VLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSAEVV-TLWYRPPDVLF 174

Query: 542 SSGRASTQTDVFGFGILILEVLSGRRPI 569
            +   ST  D++  G +  E+ +  RP+
Sbjct: 175 GAKLYSTSIDMWSAGCIFAELANAGRPL 202

>3zzw_A Tyrosine-protein kinase transmembrane receptor RO; transferase, neurotrophic tyrosine kinase, receptor-related NTRKR2; 2.90A {Homo sapiens} Length = 289

 Score =  108 bits (271), Expect = 4e-26
 Identities = 67/295 (22%), Positives = 120/295 (40%), Gaps = 49/295 (16%)

Query: 369 ENVIGVGGNGKVYKGVLEGGGAE-----IAVKRISHE-NDGGTRAFLAEISSLGRLKHKS 422
              +G    GKVYKG L G         +A+K +  +        F  E     RL+H +
Sbjct: 14  MEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPN 73

Query: 423 LVGLRGWCKREKGSLMLVYDYMENGSLDKW-------------IFQCDGSMMLSCEERIR 469
           +V L G   ++   L +++ Y  +G L ++                      L   + + 
Sbjct: 74  VVCLLGVVTKD-QPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVH 132

Query: 470 VLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLAR-MHGHGQVASTTR 528
           ++  +AAG+ YL       V+H+D+ + NVL+  ++N ++ D GL R ++     A   +
Sbjct: 133 LVAQIAAGMEYLSS---HHVVHKDLATRNVLVYDKLNVKISDLGLFREVYA----ADYYK 185

Query: 529 VVGTVGYL-----APEVFSSGRASTQTDVFGFGILILEVLS-GRRPIEEGKPNLVEMVWE 582
           +      L     APE    G+ S  +D++ +G+++ EV S G +P   G  N  + V E
Sbjct: 186 L-LGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPY-CGYSN--QDVVE 241

Query: 583 LMVQGKLLDALDARLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLE 637
           ++   ++L              +D    V  L + C    P  RP  + +   L 
Sbjct: 242 MIRNRQVLPCP-----------DDCPAWVYALMIECWNEFPSRRPRFKDIHSRLR 285

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A* Length = 302

 Score =  108 bits (271), Expect = 4e-26
 Identities = 56/224 (25%), Positives = 102/224 (45%), Gaps = 29/224 (12%)

Query: 366 FSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVG 425
           +     +G G  GKVYK   +  GA  A K I  +++     ++ EI  L    H  +V 
Sbjct: 21  WEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVK 80

Query: 426 LRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIR-VLKDVAAGVLYLHEG 484
           L G      G L ++ ++   G++D  + + D  +    E +I+ V + +   + +LH  
Sbjct: 81  LLG-AYYHDGKLWIMIEFCPGGAVDAIMLELDRGLT---EPQIQVVCRQMLEALNFLHS- 135

Query: 485 WEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTR----VVGTVGYLAPEV 540
             K+++HRD+K+ NVL+  E + RL DFG++      +   T +     +GT  ++APEV
Sbjct: 136 --KRIIHRDLKAGNVLMTLEGDIRLADFGVS-----AKNLKTLQKRDSFIGTPYWMAPEV 188

Query: 541 FSSGRASTQT-----DVFGFGILILEVLSGRRPIEEGKPNLVEM 579
                          D++  GI ++E+        + +P   E+
Sbjct: 189 VMCETMKDTPYDYKADIWSLGITLIEMA-------QIEPPHHEL 225

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens} Length = 314

 Score =  107 bits (270), Expect = 7e-26
 Identities = 62/219 (28%), Positives = 105/219 (47%), Gaps = 26/219 (11%)

Query: 366 FSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVG 425
           F     +G G  G VYK + +  G  +A+K++  E+D   +  + EIS + +     +V 
Sbjct: 31  FDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVESD--LQEIIKEISIMQQCDSPHVVK 88

Query: 426 LRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIR-VLKDVAAGVLYLHEG 484
             G    +   L +V +Y   GS+   I   + ++    E+ I  +L+    G+ YLH  
Sbjct: 89  YYG-SYFKNTDLWIVMEYCGAGSVSDIIRLRNKTLT---EDEIATILQSTLKGLEYLHF- 143

Query: 485 WEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTR----VVGTVGYLAPEV 540
              + +HRDIK+ N+LL+ E + +L DFG+A     GQ+  T      V+GT  ++APEV
Sbjct: 144 --MRKIHRDIKAGNILLNTEGHAKLADFGVA-----GQLTDTMAKRNTVIGTPFWMAPEV 196

Query: 541 FSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEM 579
                 +   D++  GI  +E+        EGKP   ++
Sbjct: 197 IQEIGYNCVADIWSLGITAIEMA-------EGKPPYADI 228

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A* Length = 327

 Score =  107 bits (269), Expect = 1e-25
 Identities = 65/241 (26%), Positives = 105/241 (43%), Gaps = 25/241 (10%)

Query: 357 QEIEAATKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTR-AFLAEISSL 415
           Q  +   +   +   IG G  G V K V +  G  +AVKRI    D   +   L ++  +
Sbjct: 15  QHWDFTAEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVV 74

Query: 416 GRL-KHKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERI--RVLK 472
            R      +V   G   RE G   +  + M + S DK+       +     E I  ++  
Sbjct: 75  MRSSDCPYIVQFYGALFRE-GDCWICMELM-STSFDKFYKYVYSVLDDVIPEEILGKITL 132

Query: 473 DVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVAST---TRV 529
                + +L E    K++HRDIK SN+LLD+  N +L DFG++     GQ+  +   TR 
Sbjct: 133 ATVKALNHLKE--NLKIIHRDIKPSNILLDRSGNIKLCDFGIS-----GQLVDSIAKTRD 185

Query: 530 VGTVGYLAPEVFSSGRA----STQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMV 585
            G   Y+APE      +      ++DV+  GI + E+ +GR P  +        V++ + 
Sbjct: 186 AGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNS-----VFDQLT 240

Query: 586 Q 586
           Q
Sbjct: 241 Q 241

>3v5q_A NT-3 growth factor receptor; kinase domain, kinase, phosphorylation, transferase-transfer inhibitor complex; HET: 0F4; 2.20A {Homo sapiens} Length = 297

 Score =  106 bits (267), Expect = 2e-25
 Identities = 65/319 (20%), Positives = 132/319 (41%), Gaps = 60/319 (18%)

Query: 343 EDWELEYWPHRITYQEIEAATKGFSEENVIGVGGNGKVYKGVLEGGGAE-----IAVKRI 397
               ++     I  +              +G G  GKV+               +AVK +
Sbjct: 8   HVQHIK--RRDIVLKR------------ELGEGAFGKVFLAECYNLSPTKDKMLVAVKAL 53

Query: 398 SHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQC- 456
                   + F  E   L  L+H+ +V   G C      L++V++YM++G L+K++    
Sbjct: 54  KDPTLAARKDFQREAELLTNLQHEHIVKFYGVCGDG-DPLIMVFEYMKHGDLNKFLRAHG 112

Query: 457 ------------DGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKE 504
                            L   + + +   +A+G++YL     +  +HRD+ + N L+   
Sbjct: 113 PDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLAS---QHFVHRDLATRNCLVGAN 169

Query: 505 MNGRLGDFGLAR-MHGHGQVASTTRVVGT----VGYLAPEVFSSGRASTQTDVFGFGILI 559
           +  ++GDFG++R ++         RV G     + ++ PE     + +T++DV+ FG+++
Sbjct: 170 LLVKIGDFGMSRDVYS----TDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVIL 225

Query: 560 LEVLS-GRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRAKGGFDEDEVERVLHLGLLC 618
            E+ + G++P      N    V E + QG++L+                 + V  + L C
Sbjct: 226 WEIFTYGKQPW-FQLSN--TEVIECITQGRVLERP-----------RVCPKEVYDVMLGC 271

Query: 619 AYPDPRARPTMRQVVKVLE 637
              +P+ R  ++++ K+L 
Sbjct: 272 WQREPQQRLNIKEIYKILH 290

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A* Length = 434

 Score =  108 bits (272), Expect = 2e-25
 Identities = 69/309 (22%), Positives = 115/309 (37%), Gaps = 74/309 (23%)

Query: 366 FSEENVIGVGGNGKV-YKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLK-HKSL 423
              E ++G G +G V ++G  +G    +AVKR+  +        L EI  L     H ++
Sbjct: 17  VVSEKILGYGSSGTVVFQGSFQG--RPVAVKRMLIDF---CDIALMEIKLLTESDDHPNV 71

Query: 424 VGLRGWCKREKGSLMLVYDYME--NGSLDKWI----FQCDGSMMLSCEERIRVLKDVAAG 477
           +        ++     +Y  +E  N +L   +       +   +      I +L+ +A+G
Sbjct: 72  IRYYCSETTDRF----LYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASG 127

Query: 478 VLYLHEGWEKKVLHRDIKSSNVLLDKEMNGR-------------LGDFGLARMHGHGQVA 524
           V +LH     K++HRD+K  N+L+                    + DFGL +    GQ +
Sbjct: 128 VAHLHS---LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQSS 184

Query: 525 STTR---VVGTVGYLAPEVFSSG-------RASTQTDVFGFGILILEVLS-GRRP----- 568
             T      GT G+ APE+           R +   D+F  G +   +LS G+ P     
Sbjct: 185 FRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKY 244

Query: 569 -----IEEGKPNLVEMVWELMVQGKLLDALDARLRAKGGFDEDEVERVLHLGLLCAYPDP 623
                I  G  +L EM          L        A      D + +++         DP
Sbjct: 245 SRESNIIRGIFSLDEMKC--------LHDRSLIAEAT-----DLISQMID-------HDP 284

Query: 624 RARPTMRQV 632
             RPT  +V
Sbjct: 285 LKRPTAMKV 293

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens} Length = 318

 Score =  105 bits (265), Expect = 3e-25
 Identities = 65/287 (22%), Positives = 112/287 (39%), Gaps = 36/287 (12%)

Query: 357 QEIEAATKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTR-AFLAEISSL 415
           Q  +A          +G G  G+V+K      G  IAVK++    +       L ++  +
Sbjct: 18  QRYQAEINDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVV 77

Query: 416 GRL-KHKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERI--RVLK 472
            +      +V   G        + +  + M     +K   +  G +     ERI  ++  
Sbjct: 78  LKSHDCPYIVQCFGTFITN-TDVFIAMELM-GTCAEKLKKRMQGPI----PERILGKMTV 131

Query: 473 DVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVAST---TRV 529
            +   + YL E  +  V+HRD+K SN+LLD+    +L DFG++     G++       R 
Sbjct: 132 AIVKALYYLKE--KHGVIHRDVKPSNILLDERGQIKLCDFGIS-----GRLVDDKAKDRS 184

Query: 530 VGTVGYLAPEVFSSGRA-----STQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELM 584
            G   Y+APE              + DV+  GI ++E+ +G+ P +  K       +E++
Sbjct: 185 AGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKT-----DFEVL 239

Query: 585 VQGKLLDALDARLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQ 631
            +  +L      L    GF  D    V      C   D R RP   +
Sbjct: 240 TK--VLQEEPPLLPGHMGFSGDFQSFV----KDCLTKDHRKRPKYNK 280

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens} Length = 324

 Score =  105 bits (265), Expect = 5e-25
 Identities = 60/204 (29%), Positives = 102/204 (50%), Gaps = 12/204 (5%)

Query: 366 FSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGT-RAFLAEISSLGRLKHKSLV 424
           + + + +G G    VYKG  +     +A+K I  E++ G     + E+S L  LKH ++V
Sbjct: 4   YIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIV 63

Query: 425 GLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRV-LKDVAAGVLYLHE 483
            L       + SL LV++Y++   L +++  C   + +     +++ L  +  G+ Y H 
Sbjct: 64  TLHDII-HTEKSLTLVFEYLDK-DLKQYLDDCGNIINMH---NVKLFLFQLLRGLAYCHR 118

Query: 484 GWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEV-FS 542
                VLHRD+K  N+L+++    +L DFGLAR            VV T+ Y  P++   
Sbjct: 119 QK---VLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYDNEVV-TLWYRPPDILLG 174

Query: 543 SGRASTQTDVFGFGILILEVLSGR 566
           S   STQ D++G G +  E+ +GR
Sbjct: 175 STDYSTQIDMWGVGCIFYEMATGR 198

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} Length = 331

 Score =  105 bits (264), Expect = 7e-25
 Identities = 52/236 (22%), Positives = 98/236 (41%), Gaps = 25/236 (10%)

Query: 337 REREEMEDWELEYWPHRI--TYQEIEAATKGFSEENVIGVGGNGKVYKGVLEGGGAEIAV 394
                  D   E    +    Y+ +           ++G G  G V K   +  G  +A+
Sbjct: 6   HHHSSGVDLGTENLYFQSMEKYENLG----------LVGEGSYGMVMKCRNKDTGRIVAI 55

Query: 395 KRI--SHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDKW 452
           K+   S ++    +  + EI  L +L+H++LV L   C ++K    LV++++++ ++   
Sbjct: 56  KKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVC-KKKKRWYLVFEFVDH-TILDD 113

Query: 453 IFQCDGSMMLSCEERIR-VLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGD 511
           +      +     + ++  L  +  G+ + H      ++HRDIK  N+L+ +    +L D
Sbjct: 114 LELFPNGLD---YQVVQKYLFQIINGIGFCHSHN---IIHRDIKPENILVSQSGVVKLCD 167

Query: 512 FGLARMHGHGQVASTTRVVGTVGYLAPEV-FSSGRASTQTDVFGFGILILEVLSGR 566
           FG AR            V  T  Y APE+     +     DV+  G L+ E+  G 
Sbjct: 168 FGFARTLAAPGEVYDDEVA-TRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGE 222

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A* Length = 297

 Score =  104 bits (262), Expect = 7e-25
 Identities = 52/208 (25%), Positives = 96/208 (46%), Gaps = 19/208 (9%)

Query: 366 FSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVG 425
           ++    IG G +G VY  +    G E+A+++++ +        + EI  +   K+ ++V 
Sbjct: 22  YTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVN 81

Query: 426 LRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERI-RVLKDVAAGVLYLHEG 484
                      L +V +Y+  GSL   + +         E +I  V ++    + +LH  
Sbjct: 82  YLD-SYLVGDELWVVMEYLAGGSLTDVVTETCMD-----EGQIAAVCRECLQALEFLHS- 134

Query: 485 WEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTR----VVGTVGYLAPEV 540
              +V+HRDIKS N+LL  + + +L DFG        Q+         +VGT  ++APEV
Sbjct: 135 --NQVIHRDIKSDNILLGMDGSVKLTDFGFC-----AQITPEQSKRSTMVGTPYWMAPEV 187

Query: 541 FSSGRASTQTDVFGFGILILEVLSGRRP 568
            +      + D++  GI+ +E++ G  P
Sbjct: 188 VTRKAYGPKVDIWSLGIMAIEMIEGEPP 215

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii} Length = 285

 Score =  104 bits (261), Expect = 7e-25
 Identities = 60/281 (21%), Positives = 107/281 (38%), Gaps = 52/281 (18%)

Query: 371 VIGVGGNGKVYKGVLEGGGAEIAVKRIS-HENDGGTRAFLAEISSLGRLKHKSLVGLRGW 429
            +G G  G V+       G E  +K I+   +        AEI  L  L H +++ +   
Sbjct: 29  KLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEV 88

Query: 430 CKREKGSLMLVYDYMENGSL-DKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKK 488
            + +  ++ +V +  E G L ++ +        LS      ++K +   + Y H    + 
Sbjct: 89  FE-DYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHS---QH 144

Query: 489 VLHRDIKSSNVLL---DKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGR 545
           V+H+D+K  N+L          ++ DFGLA +    + ++     GT  Y+APEVF    
Sbjct: 145 VVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEHSTN--AAGTALYMAPEVF-KRD 201

Query: 546 ASTQTDVFGFG-IL-ILEVLSGRRP------------IEEGKPNLVEMVWELMVQGKLLD 591
            + + D++  G ++  L  L+G  P                +PN       L  Q     
Sbjct: 202 VTFKCDIWSAGVVMYFL--LTGCLPFTGTSLEEVQQKATYKEPNYAVECRPLTPQAV--- 256

Query: 592 ALDARLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQV 632
                         D ++++L         DP  RP+  QV
Sbjct: 257 --------------DLLKQMLT-------KDPERRPSAAQV 276

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} Length = 332

 Score =  105 bits (263), Expect = 7e-25
 Identities = 42/216 (19%), Positives = 75/216 (34%), Gaps = 30/216 (13%)

Query: 430 CKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKV 489
               K  L +        +L  W+ +            + +   +A  V +LH    K +
Sbjct: 129 PSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREHGVCLHIFIQIAEAVEFLHS---KGL 185

Query: 490 LHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVAST-----------TRVVGTVGYLAP 538
           +HRD+K SN+    +   ++GDFGL       +   T           T  VGT  Y++P
Sbjct: 186 MHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTKLYMSP 245

Query: 539 EVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDARLR 598
           E       S + D+F  G+++ E+L       E        +   +   K          
Sbjct: 246 EQIHGNNYSHKVDIFSLGLILFELLYSFSTQME-----RVRIITDVRNLKFPLLFT---- 296

Query: 599 AKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVK 634
                 +   E ++   +L   P P  RP    +++
Sbjct: 297 -----QKYPQEHMMVQDMLS--PSPTERPEATDIIE 325

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A* Length = 335

 Score =  105 bits (263), Expect = 8e-25
 Identities = 57/212 (26%), Positives = 92/212 (43%), Gaps = 15/212 (7%)

Query: 372 IGVGGNGKVYKGVLEGGGAEIAVKRISHE--NDGGTRA-FLAEISSLGRLKHKSLVGLRG 428
           +G GG  K ++          A K +          R     EIS    L H+ +VG  G
Sbjct: 49  LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 108

Query: 429 WCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKK 488
               +   + +V +     SL +   +      L+  E    L+ +  G  YLH     +
Sbjct: 109 -FFEDNDFVFVVLELCRRRSLLELHKRRKA---LTEPEARYYLRQIVLGCQYLHR---NR 161

Query: 489 VLHRDIKSSNVLLDKEMNGRLGDFGLA-RMHGHGQVASTTRVVGTVGYLAPEVFSSGRAS 547
           V+HRD+K  N+ L++++  ++GDFGLA ++   G+        GT  Y+APEV S    S
Sbjct: 162 VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVL--CGTPNYIAPEVLSKKGHS 219

Query: 548 TQTDVFGFGILILEVLSGRRPIEEGKPNLVEM 579
            + DV+  G ++  +L G+ P E     L E 
Sbjct: 220 FEVDVWSIGCIMYTLLVGKPPFET--SCLKET 249

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A* Length = 294

 Score =  104 bits (261), Expect = 9e-25
 Identities = 57/212 (26%), Positives = 92/212 (43%), Gaps = 15/212 (7%)

Query: 372 IGVGGNGKVYKGVLEGGGAEIAVKRISHE--NDGGTRA-FLAEISSLGRLKHKSLVGLRG 428
           +G GG  K ++          A K +          R     EIS    L H+ +VG  G
Sbjct: 23  LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 82

Query: 429 WCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKK 488
               +   + +V +     SL +   +      L+  E    L+ +  G  YLH     +
Sbjct: 83  -FFEDNDFVFVVLELCRRRSLLELHKRRKA---LTEPEARYYLRQIVLGCQYLHR---NR 135

Query: 489 VLHRDIKSSNVLLDKEMNGRLGDFGLA-RMHGHGQVASTTRVVGTVGYLAPEVFSSGRAS 547
           V+HRD+K  N+ L++++  ++GDFGLA ++   G+        GT  Y+APEV S    S
Sbjct: 136 VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVL--CGTPNYIAPEVLSKKGHS 193

Query: 548 TQTDVFGFGILILEVLSGRRPIEEGKPNLVEM 579
            + DV+  G ++  +L G+ P E     L E 
Sbjct: 194 FEVDVWSIGCIMYTLLVGKPPFET--SCLKET 223

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ... Length = 316

 Score =  104 bits (262), Expect = 9e-25
 Identities = 76/334 (22%), Positives = 135/334 (40%), Gaps = 62/334 (18%)

Query: 341 EMEDWELEYWPHRITYQEIEAATKGFSEENVIGVGGNGKVYKGVLEG-----GGAEIAVK 395
           +   WE      R+   +             +G G  G+V +    G         +AVK
Sbjct: 18  DASKWEFP--RDRLKLGK------------PLGRGAFGQVIEADAFGIDKTATCRTVAVK 63

Query: 396 RI-SHENDGGTRAFLAEISSLGRL-KHKSLVGLRGWCKREKGSLMLVYDYMENGSL---- 449
            +         RA ++E+  L  +  H ++V L G C +  G LM++ ++ + G+L    
Sbjct: 64  MLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYL 123

Query: 450 ---------DKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVL 500
                     K   +      L+ E  I     VA G+ +L     +K +HRD+ + N+L
Sbjct: 124 RSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLAS---RKCIHRDLAARNIL 180

Query: 501 LDKEMNGRLGDFGLAR-MHGHGQVASTTRVVGTVGYL-----APEVFSSGRASTQTDVFG 554
           L ++   ++ DFGLAR ++          V      L     APE       + Q+DV+ 
Sbjct: 181 LSEKNVVKICDFGLARDIYKDP-----DYVRKGDARLPLKWMAPETIFDRVYTIQSDVWS 235

Query: 555 FGILILEVLS-GRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRAKGGFDEDEVERVLH 613
           FG+L+ E+ S G  P    K +  E     + +G  + A D        +   E+ + + 
Sbjct: 236 FGVLLWEIFSLGASPYPGVKID--EEFCRRLKEGTRMRAPD--------YTTPEMYQTM- 284

Query: 614 LGLLCAYPDPRARPTMRQVVKVLEGKIEAGIENE 647
             L C + +P  RPT  ++V+ L   ++A  + +
Sbjct: 285 --LDCWHGEPSQRPTFSELVEHLGNLLQANAQQD 316

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A* Length = 311

 Score =  104 bits (261), Expect = 9e-25
 Identities = 53/204 (25%), Positives = 92/204 (45%), Gaps = 12/204 (5%)

Query: 372 IGVGGNGKVYKGVLEGGGAEIAVK--RISHENDGGTRA-FLAEISSLGRLKHKSLVGLRG 428
           +G GG  +V+         ++AVK  R     D      F  E  +   L H ++V +  
Sbjct: 20  LGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYD 79

Query: 429 WCKREKGSLMLVYDYME--NGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWE 486
             + E  +  L Y  ME  +G   + I   +G   ++ +  I V+ D    + + H+   
Sbjct: 80  TGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGP--MTPKRAIEVIADACQALNFSHQ--- 134

Query: 487 KKVLHRDIKSSNVLLDKEMNGRLGDFGLAR--MHGHGQVASTTRVVGTVGYLAPEVFSSG 544
             ++HRD+K +N+++      ++ DFG+AR        V  T  V+GT  YL+PE     
Sbjct: 135 NGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGD 194

Query: 545 RASTQTDVFGFGILILEVLSGRRP 568
               ++DV+  G ++ EVL+G  P
Sbjct: 195 SVDARSDVYSLGCVLYEVLTGEPP 218

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A* Length = 321

 Score =  104 bits (261), Expect = 1e-24
 Identities = 53/208 (25%), Positives = 95/208 (45%), Gaps = 19/208 (9%)

Query: 366 FSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVG 425
                 IG G  G V     +  G ++AVK +             E+  +   +H ++V 
Sbjct: 47  LDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVE 106

Query: 426 LRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERI-RVLKDVAAGVLYLHEG 484
           +          L ++ ++++ G+L   + Q   +     EE+I  V + V   + YLH  
Sbjct: 107 MYK-SYLVGEELWVLMEFLQGGALTDIVSQVRLN-----EEQIATVCEAVLQALAYLHA- 159

Query: 485 WEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTR----VVGTVGYLAPEV 540
             + V+HRDIKS ++LL  +   +L DFG        Q++        +VGT  ++APEV
Sbjct: 160 --QGVIHRDIKSDSILLTLDGRVKLSDFGFC-----AQISKDVPKRKSLVGTPYWMAPEV 212

Query: 541 FSSGRASTQTDVFGFGILILEVLSGRRP 568
            S    +T+ D++  GI+++E++ G  P
Sbjct: 213 ISRSLYATEVDIWSLGIMVIEMVDGEPP 240

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A* Length = 277

 Score =  103 bits (258), Expect = 1e-24
 Identities = 65/274 (23%), Positives = 102/274 (37%), Gaps = 42/274 (15%)

Query: 371 VIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWC 430
            IG G  G+V   V +G     A K+I          F  EI  +  L H +++ L    
Sbjct: 16  TIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETF 75

Query: 431 KREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVL 490
           + +   + LV +    G L + +       +    +  R++KDV + V Y H   +  V 
Sbjct: 76  E-DNTDIYLVMELCTGGELFERVVH---KRVFRESDAARIMKDVLSAVAYCH---KLNVA 128

Query: 491 HRDIKSSNVLL---DKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRAS 547
           HRD+K  N L      +   +L DFGLA     G++  T   VGT  Y++P+V   G   
Sbjct: 129 HRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRT--KVGTPYYVSPQVL-EGLYG 185

Query: 548 TQTDVFGFG-IL-ILEVLSGRRP-IEEGKPNLVEMVWELMVQGKLLDALDARLRAKGGFD 604
            + D +  G ++ +L  L G  P        ++  +                      F 
Sbjct: 186 PECDEWSAGVMMYVL--LCGYPPFSAPTDSEVMLKI----------------REGTFTFP 227

Query: 605 EDEVERV------LHLGLLCAYPDPRARPTMRQV 632
           E +   V      L   LL     P+ R T  Q 
Sbjct: 228 EKDWLNVSPQAESLIRRLLT--KSPKQRITSLQA 259

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7 Length = 387

 Score =  105 bits (264), Expect = 1e-24
 Identities = 50/243 (20%), Positives = 98/243 (40%), Gaps = 14/243 (5%)

Query: 330 KRKQRRAREREEMEDWELEYWPHRITYQEIEAATKGFSEENVIGVGGNGKVYKGVLEGGG 389
           K    +  + ++  +   + +  +    +  +    +     +G G  G V++ V +  G
Sbjct: 17  KYDGPKINDYDKFYEDIWKKYVPQPVEVKQGSVYDYYDILEELGSGAFGVVHRCVEKATG 76

Query: 390 AEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSL 449
                K I+            EIS + +L H  L+ L    + +K  ++L+ +++  G L
Sbjct: 77  RVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFE-DKYEMVLILEFLSGGEL 135

Query: 450 DKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRL 509
              I        +S  E I  ++    G+ ++H   E  ++H DIK  N++ + +    +
Sbjct: 136 FDRI--AAEDYKMSEAEVINYMRQACEGLKHMH---EHSIVHLDIKPENIMCETKKASSV 190

Query: 510 --GDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGIL--ILEVLSG 565
              DFGLA      ++        T  + APE+         TD++  G+L  +L  LSG
Sbjct: 191 KIIDFGLATKLNPDEIVKV--TTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVL--LSG 246

Query: 566 RRP 568
             P
Sbjct: 247 LSP 249

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* Length = 313

 Score =  103 bits (259), Expect = 2e-24
 Identities = 52/231 (22%), Positives = 99/231 (42%), Gaps = 36/231 (15%)

Query: 370 NVIGVGGNGKVYKGVLEGGGAEIAVKRISHEN--DGGTRAFLAEISSLGRLKHKSL--VG 425
             IG GG+ KV++ + E      A+K ++ E   +    ++  EI+ L +L+  S   + 
Sbjct: 34  KQIGSGGSSKVFQVLNEKKQ-IYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIR 92

Query: 426 LRGWCKREKGSLMLVYDYME--NGSLDKWIFQCDGSMMLSCEERIRV-LKDVAAGVLYLH 482
           L  +       + +V   ME  N  L+ W+ +   S+        +   K++   V  +H
Sbjct: 93  LYDYEI-TDQYIYMV---MECGNIDLNSWLKK-KKSI---DPWERKSYWKNMLEAVHTIH 144

Query: 483 EGWEKKVLHRDIKSSNVLLDKEMNGR--LGDFGLAR-MHGHGQVASTTRVVGTVGYLAPE 539
           +     ++H D+K +N L+    +G   L DFG+A  M            VGTV Y+ PE
Sbjct: 145 Q---HGIVHSDLKPANFLIV---DGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPE 198

Query: 540 VF-----------SSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEM 579
                        S  + S ++DV+  G ++  +  G+ P ++    + ++
Sbjct: 199 AIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKL 249

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens} Length = 311

 Score =  103 bits (259), Expect = 2e-24
 Identities = 54/201 (26%), Positives = 89/201 (44%), Gaps = 13/201 (6%)

Query: 370 NVIGVGGNGKVYKGVLEGGGAEIAVKRI--SHENDGGTRAFLAEISSLGRLKHKSLVGLR 427
             IG G  G V+K      G  +A+K+   S ++    +  L EI  L +LKH +LV L 
Sbjct: 9   GKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLL 68

Query: 428 GWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIR-VLKDVAAGVLYLHEGWE 486
               R K  L LV++Y ++ ++   + +    +    E  ++ +       V + H+   
Sbjct: 69  EVF-RRKRRLHLVFEYCDH-TVLHELDRYQRGVP---EHLVKSITWQTLQAVNFCHKHN- 122

Query: 487 KKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEV-FSSGR 545
              +HRD+K  N+L+ K    +L DFG AR+           V  T  Y +PE+     +
Sbjct: 123 --CIHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYDDEVA-TRWYRSPELLVGDTQ 179

Query: 546 ASTQTDVFGFGILILEVLSGR 566
                DV+  G +  E+LSG 
Sbjct: 180 YGPPVDVWAIGCVFAELLSGV 200

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis} Length = 681

 Score =  107 bits (269), Expect = 2e-24
 Identities = 47/206 (22%), Positives = 83/206 (40%), Gaps = 25/206 (12%)

Query: 371 VIGVGGNGKVYKG---VLEGGGAEIAVKRISHENDGGTRA-FLAEISSLGRLKHKSLVGL 426
            I  GG G +Y      + G    + +K + H  D   +A  +AE   L  + H S+V +
Sbjct: 87  CIAHGGLGWIYLALDRNVNG--RPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQI 144

Query: 427 R--GWCKREKGSLM--LVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLH 482
                     G  +  +V +Y+   SL +   Q      L   E I  L ++   + YLH
Sbjct: 145 FNFVEHTDRHGDPVGYIVMEYVGGQSLKRSKGQK-----LPVAEAIAYLLEILPALSYLH 199

Query: 483 EGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFS 542
                 +++ D+K  N++L +E   +L D G        ++ S   + GT G+ APE+  
Sbjct: 200 S---IGLVYNDLKPENIMLTEE-QLKLIDLGAVS-----RINSFGYLYGTPGFQAPEI-V 249

Query: 543 SGRASTQTDVFGFGILILEVLSGRRP 568
               +  TD++  G  +  +      
Sbjct: 250 RTGPTVATDIYTVGRTLAALTLDLPT 275

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* Length = 390

 Score =  104 bits (262), Expect = 3e-24
 Identities = 53/225 (23%), Positives = 96/225 (42%), Gaps = 34/225 (15%)

Query: 364 KGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHEN--DGGTRAFLAEISSLGRLKHK 421
           + +S    IG GG+ KV++ + E      A+K ++ E   +    ++  EI+ L +L+  
Sbjct: 56  RIYSILKQIGSGGSSKVFQVLNEKKQ-IYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQH 114

Query: 422 SL--VGLRGWCKREKGSLMLVYDYME--NGSLDKWIFQCDGSMMLSCEERIRVLKDVAAG 477
           S   + L  +       + +V   ME  N  L+ W+ +   S  +   ER    K++   
Sbjct: 115 SDKIIRLYDYEI-TDQYIYMV---MECGNIDLNSWLKK-KKS--IDPWERKSYWKNMLEA 167

Query: 478 VLYLHEGWEKKVLHRDIKSSNVLLDKEMNGR--LGDFGLAR-MHGHGQVASTTRVVGTVG 534
           V  +H+     ++H D+K +N L+    +G   L DFG+A  M            VG V 
Sbjct: 168 VHTIHQ---HGIVHSDLKPANFLIV---DGMLKLIDFGIANQMQPDTTSVVKDSQVGAVN 221

Query: 535 YLAPEVFSS-----------GRASTQTDVFGFGILILEVLSGRRP 568
           Y+ PE                + S ++DV+  G ++  +  G+ P
Sbjct: 222 YMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTP 266

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A Length = 573

 Score =  106 bits (267), Expect = 3e-24
 Identities = 54/247 (21%), Positives = 97/247 (39%), Gaps = 18/247 (7%)

Query: 330 KRKQRRAREREEMEDWELEYWPHRITYQEIEAATKGFSE----ENVIGVGGNGKVYKGVL 385
            +  R         D  +     +   Q +E       +       +G G  G V++   
Sbjct: 119 GKIVRGKGTVSSNYDNYVFDIWKQYYPQPVEIKHDHVLDHYDIHEELGTGAFGVVHRVTE 178

Query: 386 EGGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYME 445
              G   A K +   ++        EI ++  L+H +LV L    + +   ++++Y++M 
Sbjct: 179 RATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFE-DDNEMVMIYEFMS 237

Query: 446 NGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEM 505
            G L + +        +S +E +  ++ V  G+ ++H   E   +H D+K  N++   + 
Sbjct: 238 GGELFEKVADEHNK--MSEDEAVEYMRQVCKGLCHMH---ENNYVHLDLKPENIMFTTKR 292

Query: 506 NGRL--GDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGIL--ILE 561
           +  L   DFGL       Q        GT  + APEV         TD++  G+L  IL 
Sbjct: 293 SNELKLIDFGLTAHLDPKQSVKV--TTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYIL- 349

Query: 562 VLSGRRP 568
            LSG  P
Sbjct: 350 -LSGLSP 355

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7 Length = 343

 Score =  103 bits (259), Expect = 3e-24
 Identities = 74/332 (22%), Positives = 132/332 (39%), Gaps = 75/332 (22%)

Query: 343 EDWELEYWPHRITYQEIEAATKGFSEENVIGVGGNGKVYKGVLEG-----GGAEIAVKRI 397
           +   LEY  + I Y               IG G  G+V++    G         +AVK +
Sbjct: 38  KLLSLEYPRNNIEYVR------------DIGEGAFGRVFQARAPGLLPYEPFTMVAVKML 85

Query: 398 -SHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSL------- 449
               +      F  E + +    + ++V L G C      + L+++YM  G L       
Sbjct: 86  KEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVG-KPMCLLFEYMAYGDLNEFLRSM 144

Query: 450 --------------DKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIK 495
                          +      G   LSC E++ + + VAAG+ YL E   +K +HRD+ 
Sbjct: 145 SPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSE---RKFVHRDLA 201

Query: 496 SSNVLLDKEMNGRLGDFGLAR---------MHGHGQVASTTRVVGTVGYLAPEVFSSGRA 546
           + N L+ + M  ++ DFGL+R           G+  +         + ++ PE     R 
Sbjct: 202 TRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIP--------IRWMPPESIFYNRY 253

Query: 547 STQTDVFGFGILILEVLS-GRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRAKGGFDE 605
           +T++DV+ +G+++ E+ S G +P   G  +  E V   +  G +L              E
Sbjct: 254 TTESDVWAYGVVLWEIFSYGLQPY-YGMAH--EEVIYYVRDGNILACP-----------E 299

Query: 606 DEVERVLHLGLLCAYPDPRARPTMRQVVKVLE 637
           +    + +L  LC    P  RP+   + ++L+
Sbjct: 300 NCPLELYNLMRLCWSKLPADRPSFCSIHRILQ 331

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* Length = 351

 Score =  103 bits (260), Expect = 3e-24
 Identities = 67/221 (30%), Positives = 110/221 (49%), Gaps = 28/221 (12%)

Query: 370 NVIGVGGNGKVYKGVLEGGGAEIAVKRI--SHENDGGTRAFLAEISSLGRLKHKSLVGLR 427
             IG G  G+V+K      G ++A+K++   +E +G     L EI  L  LKH+++V L 
Sbjct: 23  AKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLI 82

Query: 428 G-------WCKREKGSLMLVYDYMEN---GSLDKWIFQCDGSMMLSCEERIRVLKDVAAG 477
                      R KGS+ LV+D+ E+   G L       +  +  +  E  RV++ +  G
Sbjct: 83  EICRTKASPYNRCKGSIYLVFDFCEHDLAGLLS------NVLVKFTLSEIKRVMQMLLNG 136

Query: 478 VLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVAS----TTRVVGTV 533
           + Y+H      +LHRD+K++NVL+ ++   +L DFGLAR     + +     T RVV T+
Sbjct: 137 LYYIHRNK---ILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYTNRVV-TL 192

Query: 534 GYLAPEV-FSSGRASTQTDVFGFGILILEVLSGRRPIEEGK 573
            Y  PE+           D++G G ++ E+ + R PI +G 
Sbjct: 193 WYRPPELLLGERDYGPPIDLWGAGCIMAEMWT-RSPIMQGN 232

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} Length = 343

 Score =  103 bits (259), Expect = 3e-24
 Identities = 52/234 (22%), Positives = 101/234 (43%), Gaps = 30/234 (12%)

Query: 364 KGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHEN--DGGTRAFLAEISSLGRLKHK 421
           + +S    IG GG+ KV++ + E      A+K ++ E   +    ++  EI+ L +L+  
Sbjct: 9   RIYSILKQIGSGGSSKVFQVLNEKKQ-IYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQH 67

Query: 422 SL--VGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVL 479
           S   + L  +       + +V +   N  L+ W+ +   S  +   ER    K++   V 
Sbjct: 68  SDKIIRLYDYEI-TDQYIYMVMEC-GNIDLNSWLKK-KKS--IDPWERKSYWKNMLEAVH 122

Query: 480 YLHEGWEKKVLHRDIKSSNVLLDKEMNGR--LGDFGLAR-MHGHGQVASTTRVVGTVGYL 536
            +H+     ++H D+K +N L+    +G   L DFG+A  M            VGTV Y+
Sbjct: 123 TIHQ---HGIVHSDLKPANFLIV---DGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYM 176

Query: 537 APEVFSSGRA-----------STQTDVFGFGILILEVLSGRRPIEEGKPNLVEM 579
            PE      +           S ++DV+  G ++  +  G+ P ++    + ++
Sbjct: 177 PPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKL 230

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A Length = 351

 Score =  103 bits (259), Expect = 4e-24
 Identities = 69/279 (24%), Positives = 108/279 (38%), Gaps = 42/279 (15%)

Query: 371 VIGVGGNGKVYKGVLEGGGAEIAVKRIS-----HENDGGTRAFLAEISSLGRLKHKSLVG 425
           VIG G    V + +    G + AVK +            T     E S    LKH  +V 
Sbjct: 31  VIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVE 90

Query: 426 LRGWCKREKGSLMLVYDYMENGSL-DKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEG 484
           L        G L +V+++M+   L  + + + D   + S       ++ +   + Y H+ 
Sbjct: 91  LLETYS-SDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHD- 148

Query: 485 WEKKVLHRDIKSSNVLL---DKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVF 541
               ++HRD+K   VLL   +     +LG FG+A   G   + +  RV GT  ++APEV 
Sbjct: 149 --NNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRV-GTPHFMAPEVV 205

Query: 542 SSGRASTQTDVFGFG-IL-ILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRA 599
                    DV+G G IL IL  LSG  P    K  L E +                ++ 
Sbjct: 206 KREPYGKPVDVWGCGVILFIL--LSGCLPFYGTKERLFEGI----------------IKG 247

Query: 600 KGGFDEDEVERV------LHLGLLCAYPDPRARPTMRQV 632
           K   +  +   +      L   +L    DP  R T+ + 
Sbjct: 248 KYKMNPRQWSHISESAKDLVRRMLM--LDPAERITVYEA 284

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens} Length = 337

 Score =  103 bits (258), Expect = 4e-24
 Identities = 46/226 (20%), Positives = 90/226 (39%), Gaps = 24/226 (10%)

Query: 369 ENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLK-HKSLVGLR 427
             V+  GG   VY+    G G E A+KR+    +   RA + E+  + +L  H ++V   
Sbjct: 33  RRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFC 92

Query: 428 GWC-------KREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLY 480
                        +   +L+ +  +   ++  + + +    LSC+  +++       V +
Sbjct: 93  SAASIGKEESDTGQAEFLLLTELCKGQLVEF-LKKMESRGPLSCDTVLKIFYQTCRAVQH 151

Query: 481 LHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTR-----------V 529
           +H   +  ++HRD+K  N+LL  +   +L DFG A    H    S +             
Sbjct: 152 MHRQ-KPPIIHRDLKVENLLLSNQGTIKLCDFGSATTISHYPDYSWSAQRRALVEEEITR 210

Query: 530 VGTVGYLAPEVFSSGR---ASTQTDVFGFGILILEVLSGRRPIEEG 572
             T  Y  PE+           + D++  G ++  +   + P E+G
Sbjct: 211 NTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDG 256

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens} Length = 278

 Score =  101 bits (255), Expect = 4e-24
 Identities = 55/212 (25%), Positives = 97/212 (45%), Gaps = 14/212 (6%)

Query: 372 IGVGGNGKVYKGVLEGGGAEIAVKRISHE---NDGGTRAFLAEISSLGRLKHKSLVGLRG 428
           +G G    VY+      G E+A+K I  +     G  +    E+    +LKH S++ L  
Sbjct: 19  LGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYN 78

Query: 429 WCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKK 488
           + +     + LV +   NG +++++         S  E    +  +  G+LYLH      
Sbjct: 79  YFEDSN-YVYLVLEMCHNGEMNRYLKNRVKP--FSENEARHFMHQIITGMLYLHS---HG 132

Query: 489 VLHRDIKSSNVLLDKEMNGRLGDFGLA-RMHGHGQVASTTRVVGTVGYLAPEVFSSGRAS 547
           +LHRD+  SN+LL + MN ++ DFGLA ++    +   T    GT  Y++PE+ +     
Sbjct: 133 ILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYTL--CGTPNYISPEIATRSAHG 190

Query: 548 TQTDVFGFGILILEVLSGRRPIEEGKPNLVEM 579
            ++DV+  G +   +L GR P +     +   
Sbjct: 191 LESDVWSLGCMFYTLLIGRPPFDT--DTVKNT 220

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} PDB: 2qkr_A* Length = 311

 Score =  102 bits (257), Expect = 4e-24
 Identities = 64/205 (31%), Positives = 105/205 (51%), Gaps = 14/205 (6%)

Query: 366 FSEENVIGVGGNGKVYKGVLEGGGAEIAVKRI--SHENDGGTRAFLAEISSLGRLKHKSL 423
           + +   +G G  G VYK   +  G  +A+KRI    E++G     + EIS L  L H ++
Sbjct: 23  YQKLEKVGEGTYGVVYKA-KDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNI 81

Query: 424 VGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIR-VLKDVAAGVLYLH 482
           V L       +  L LV+++ME   L K + +    +  S   +I+  L  +  GV + H
Sbjct: 82  VSLID-VIHSERCLTLVFEFMEK-DLKKVLDENKTGLQDS---QIKIYLYQLLRGVAHCH 136

Query: 483 EGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEV-F 541
           +     +LHRD+K  N+L++ +   +L DFGLAR  G    + T  VV T+ Y AP+V  
Sbjct: 137 QHR---ILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVV-TLWYRAPDVLM 192

Query: 542 SSGRASTQTDVFGFGILILEVLSGR 566
            S + ST  D++  G +  E+++G+
Sbjct: 193 GSKKYSTSVDIWSIGCIFAEMITGK 217

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens} Length = 326

 Score =  102 bits (256), Expect = 6e-24
 Identities = 62/230 (26%), Positives = 101/230 (43%), Gaps = 34/230 (14%)

Query: 366 FSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRL-KHKSLV 424
           F    ++G G  G+VYKG     G   A+K +    D        EI+ L +   H+++ 
Sbjct: 26  FELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDE-EEEIKQEINMLKKYSHHRNIA 84

Query: 425 G-----LRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIR-VLKDVAAGV 478
                 ++         L LV ++   GS+   I    G+ +   EE I  + +++  G+
Sbjct: 85  TYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTL--KEEWIAYICREILRGL 142

Query: 479 LYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTR----VVGTVG 534
            +LH+    KV+HRDIK  NVLL +    +L DFG++      Q+  T       +GT  
Sbjct: 143 SHLHQ---HKVIHRDIKGQNVLLTENAEVKLVDFGVS-----AQLDRTVGRRNTFIGTPY 194

Query: 535 YLAPEVFSSGRASTQT-----DVFGFGILILEVLSGRRPIEEGKPNLVEM 579
           ++APEV +       T     D++  GI  +E       + EG P L +M
Sbjct: 195 WMAPEVIACDENPDATYDFKSDLWSLGITAIE-------MAEGAPPLCDM 237

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens} Length = 365

 Score =  102 bits (256), Expect = 9e-24
 Identities = 38/230 (16%), Positives = 73/230 (31%), Gaps = 23/230 (10%)

Query: 358 EIEAATKGFSEENVIGVGGNGKVYKGVLEGG-----GAEIAVKRISHENDGGTRAFLAEI 412
           E +  +K     +++G G   +VY+             +  +K     N          +
Sbjct: 59  EFQLGSKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPANPWEFYIGTQLM 118

Query: 413 SSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWI--FQCDGSMMLSCEERIRV 470
             L        +         +   +LV +    G+L   I  ++     ++     I  
Sbjct: 119 ERLKPSMQHMFMKFYS-AHLFQNGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISF 177

Query: 471 LKDVAAGVLYLHEGWEKKVLHRDIKSSNVLL-----------DKEMNGRLGDFGLAR-MH 518
              +   +  +H+    +++H DIK  N +L           D      L D G +  M 
Sbjct: 178 AMRMLYMIEQVHD---CEIIHGDIKPDNFILGNGFLEQDDEDDLSAGLALIDLGQSIDMK 234

Query: 519 GHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRP 568
              +    T    T G+   E+ S+   + Q D FG    +  +L G   
Sbjct: 235 LFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYM 284

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A Length = 377

 Score =  102 bits (256), Expect = 9e-24
 Identities = 38/307 (12%), Positives = 82/307 (26%), Gaps = 70/307 (22%)

Query: 371 VIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRA----------------------- 407
           V+G        +   +  G    V          + A                       
Sbjct: 80  VLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQA 139

Query: 408 -----FLAEISSLGRLKHKSLVGLRGWCKRE-KGSLMLVYDYME--NGSLDKWIFQ-CDG 458
                F+     +   + K ++ +R   +     S   +Y  M+    +  + +      
Sbjct: 140 KVHLRFIFPFDLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRMQSNLQTFGEVLLSHSST 199

Query: 459 SMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMH 518
              L    R+++   V   +  LH      ++H  ++  +++LD+     L  F      
Sbjct: 200 HKSLVHHARLQLTLQVIRLLASLHH---YGLVHTYLRPVDIVLDQRGGVFLTGFEHLVRD 256

Query: 519 GHGQVASTTRVVGTVGYLAPEVFSS-----------GRASTQTDVFGFGILILEVLSGRR 567
           G            + G+  PE+ +               +   D +  G++I  +     
Sbjct: 257 GA-----RVVSSVSRGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLVIYWIWCADL 311

Query: 568 PIEEGKPNLVEMVWELMVQGKLLDALDARLRAKGGFDEDEVERVLHLGLLCAYPDPRARP 627
           PI +                  L   +   R+     +  V  +L  G L        R 
Sbjct: 312 PITKDAA---------------LGGSEWIFRSCKNIPQ-PVRALLE-GFLR--YPKEDRL 352

Query: 628 TMRQVVK 634
              Q ++
Sbjct: 353 LPLQAME 359

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A Length = 290

 Score =  101 bits (253), Expect = 9e-24
 Identities = 52/220 (23%), Positives = 92/220 (41%), Gaps = 27/220 (12%)

Query: 366 FSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTR-AFLAEIS-SLGRLKHKSL 423
                 +G G  G V K      G  +AVKRI    +   +   L ++  S+  +     
Sbjct: 9   LEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFT 68

Query: 424 VGLRGWCKREKGSLMLVYDYMENGSLD---KWIFQCDGSMMLSCEERI--RVLKDVAAGV 478
           V   G   RE G + +  + M + SLD   K +     ++     E I  ++   +   +
Sbjct: 69  VTFYGALFRE-GDVWICMELM-DTSLDKFYKQVIDKGQTI----PEDILGKIAVSIVKAL 122

Query: 479 LYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVAST---TRVVGTVGY 535
            +LH   +  V+HRD+K SNVL++     ++ DFG++     G +          G   Y
Sbjct: 123 EHLHS--KLSVIHRDVKPSNVLINALGQVKMCDFGIS-----GYLVDDVAKDIDAGCKPY 175

Query: 536 LAPEVFSSGRA----STQTDVFGFGILILEVLSGRRPIEE 571
           +APE  +        S ++D++  GI ++E+   R P + 
Sbjct: 176 MAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDS 215

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A* Length = 303

 Score =  101 bits (253), Expect = 9e-24
 Identities = 58/212 (27%), Positives = 98/212 (46%), Gaps = 26/212 (12%)

Query: 366 FSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHEN-DGGTRAFLAEISSLGRLKHKSLV 424
           F++   IG G  G+V+KG+       +A+K I  E  +        EI+ L +     + 
Sbjct: 24  FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 83

Query: 425 GLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSC---EERIR-VLKDVAAGVLY 480
              G    +   L ++ +Y+  GS           ++      E +I  +L+++  G+ Y
Sbjct: 84  KYYG-SYLKDTKLWIIMEYLGGGSAL--------DLLEPGPLDETQIATILREILKGLDY 134

Query: 481 LHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTR----VVGTVGYL 536
           LH    +K +HRDIK++NVLL +    +L DFG+A     GQ+  T       VGT  ++
Sbjct: 135 LHS---EKKIHRDIKAANVLLSEHGEVKLADFGVA-----GQLTDTQIKRNTFVGTPFWM 186

Query: 537 APEVFSSGRASTQTDVFGFGILILEVLSGRRP 568
           APEV       ++ D++  GI  +E+  G  P
Sbjct: 187 APEVIKQSAYDSKADIWSLGITAIELARGEPP 218

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A* Length = 317

 Score =  101 bits (254), Expect = 1e-23
 Identities = 61/210 (29%), Positives = 104/210 (49%), Gaps = 19/210 (9%)

Query: 366 FSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGT-----RAFLAEISSLGRLKH 420
           F +   +G G    VYKG+ +  G  +A+K +  +++ GT     R    EIS +  LKH
Sbjct: 7   FKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIR----EISLMKELKH 62

Query: 421 KSLVGLRGWCKREKGSLMLVYDYMEN---GSLDKWIFQCDGSMMLSCEERIRVLKDVAAG 477
           +++V L       +  L LV+++M+N     +D          +     +      +  G
Sbjct: 63  ENIVRLYDVI-HTENKLTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVK-YFQWQLLQG 120

Query: 478 VLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLA 537
           + + HE     +LHRD+K  N+L++K    +LGDFGLAR  G      ++ VV T+ Y A
Sbjct: 121 LAFCHENK---ILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFSSEVV-TLWYRA 176

Query: 538 PEV-FSSGRASTQTDVFGFGILILEVLSGR 566
           P+V   S   ST  D++  G ++ E+++G+
Sbjct: 177 PDVLMGSRTYSTSIDIWSCGCILAEMITGK 206

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B Length = 326

 Score =  101 bits (254), Expect = 1e-23
 Identities = 59/214 (27%), Positives = 105/214 (49%), Gaps = 18/214 (8%)

Query: 366 FSEENVIGVGGNGKVYKGV-LEGGGAEIAVKRI--SHENDGGTRAFLAEISSLGRLK--- 419
           +     IG G  GKV+K   L+ GG  +A+KR+      +G   + + E++ L  L+   
Sbjct: 13  YECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFE 72

Query: 420 HKSLVGLR----GWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVA 475
           H ++V L           +  L LV+++++   L  ++ +      +  E    ++  + 
Sbjct: 73  HPNVVRLFDVCTVSRTDRETKLTLVFEHVDQ-DLTTYLDKV-PEPGVPTETIKDMMFQLL 130

Query: 476 AGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGY 535
            G+ +LH      V+HRD+K  N+L+      +L DFGLAR++   Q+A T+ VV T+ Y
Sbjct: 131 RGLDFLHSHR---VVHRDLKPQNILVTSSGQIKLADFGLARIYSF-QMALTSVVV-TLWY 185

Query: 536 LAPEVFSSGRASTQTDVFGFGILILEVLSGRRPI 569
            APEV      +T  D++  G +  E+   R+P+
Sbjct: 186 RAPEVLLQSSYATPVDLWSVGCIFAEMFR-RKPL 218

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A* Length = 298

 Score =  100 bits (252), Expect = 1e-23
 Identities = 68/300 (22%), Positives = 118/300 (39%), Gaps = 58/300 (19%)

Query: 362 ATKGFSEE----NVIGVGGNGKVYKGVLEGGGAEIAVKRIS---------HENDGGTRAF 408
           +T GF E      ++G G +  V + + +    E AVK I           E      A 
Sbjct: 11  STHGFYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREAT 70

Query: 409 LAEISSLGRLK-HKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEER 467
           L E+  L ++  H +++ L+   +       LV+D M+ G L  ++ +    + LS +E 
Sbjct: 71  LKEVDILRKVSGHPNIIQLKDTYE-TNTFFFLVFDLMKKGELFDYLTE---KVTLSEKET 126

Query: 468 IRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTT 527
            ++++ +   +  LH+     ++HRD+K  N+LLD +MN +L DFG +     G+     
Sbjct: 127 RKIMRALLEVICALHK---LNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLRE- 182

Query: 528 RVVGTVGYLAPEVFSSGRASTQT------DVFGFG-IL-ILEVLSGRRP-IEEGKPNLVE 578
            V GT  YLAPE+                D++  G I+  L  L+G  P     +  ++ 
Sbjct: 183 -VCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTL--LAGSPPFWHRKQMLMLR 239

Query: 579 MVWELMVQGKLLDALDARLRAKGGFDEDEVERV------LHLGLLCAYPDPRARPTMRQV 632
           M+                +     F   E +        L    L     P+ R T  + 
Sbjct: 240 MI----------------MSGNYQFGSPEWDDYSDTVKDLVSRFLV--VQPQKRYTAEEA 281

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A Length = 288

 Score =  100 bits (252), Expect = 1e-23
 Identities = 64/205 (31%), Positives = 102/205 (49%), Gaps = 14/205 (6%)

Query: 366 FSEENVIGVGGNGKVYKGVLEGGGAEIAVKRI--SHENDGGTRAFLAEISSLGRLKHKSL 423
           +     IG G  G VYK      G   A+K+I    E++G     + EIS L  LKH ++
Sbjct: 4   YHGLEKIGEGTYGVVYKA-QNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNI 62

Query: 424 VGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIR-VLKDVAAGVLYLH 482
           V L       K  L+LV+++++   L K +  C+G +        +  L  +  G+ Y H
Sbjct: 63  VKLYDVI-HTKKRLVLVFEHLDQ-DLKKLLDVCEGGLESV---TAKSFLLQLLNGIAYCH 117

Query: 483 EGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEV-F 541
           +     VLHRD+K  N+L+++E   ++ DFGLAR  G      T  +V T+ Y AP+V  
Sbjct: 118 DRR---VLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEIV-TLWYRAPDVLM 173

Query: 542 SSGRASTQTDVFGFGILILEVLSGR 566
            S + ST  D++  G +  E+++G 
Sbjct: 174 GSKKYSTTIDIWSVGCIFAEMVNGT 198

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* Length = 494

 Score =  104 bits (260), Expect = 1e-23
 Identities = 67/306 (21%), Positives = 125/306 (40%), Gaps = 40/306 (13%)

Query: 369 ENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTR--AFLAEISSLGRLKHKSLVGL 426
              +G G  G+V     +    E A+K I   +   +     L E++ L  L H +++ L
Sbjct: 42  VKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKL 101

Query: 427 RGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWE 486
             + + +K +  LV +  + G L   I         +  +   ++K V +GV YLH+   
Sbjct: 102 YDFFE-DKRNYYLVMECYKGGELFDEIIHRM---KFNEVDAAVIIKQVLSGVTYLHK--- 154

Query: 487 KKVLHRDIKSSNVLL-DKEMNGRL--GDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSS 543
             ++HRD+K  N+LL  KE +  +   DFGL+ +  + +       +GT  Y+APEV   
Sbjct: 155 HNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKKMKE--RLGTAYYIAPEVLR- 211

Query: 544 GRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRAKGGF 603
            +   + DV+  G+++  +L+G  P   G     E+             L    + K  F
Sbjct: 212 KKYDEKCDVWSIGVILFILLAGYPPF--GGQTDQEI-------------LRKVEKGKYTF 256

Query: 604 DEDEVERV------LHLGLLCAYPDPRARPTMRQVVKV--LEGKIEAGIENETEDMDAYL 655
           D  E + V      L   +L    D + R + +Q ++   ++               A  
Sbjct: 257 DSPEWKNVSEGAKDLIKQMLQ--FDSQRRISAQQALEHPWIKEMCSKKESGIELPSLANA 314

Query: 656 LQQVKS 661
           ++ ++ 
Sbjct: 315 IENMRK 320

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens} Length = 308

 Score =  100 bits (252), Expect = 1e-23
 Identities = 60/220 (27%), Positives = 103/220 (46%), Gaps = 20/220 (9%)

Query: 366 FSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHEN-DGGTRAF----LAEISSLGRLK- 419
           +     IGVG  G VYK      G  +A+K +   N  GG        + E++ L RL+ 
Sbjct: 11  YEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEA 70

Query: 420 --HKSLVGLR----GWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKD 473
             H ++V L           +  + LV+++++   L  ++ +      L  E    +++ 
Sbjct: 71  FEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKA-PPPGLPAETIKDLMRQ 128

Query: 474 VAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRVVGTV 533
              G+ +LH      ++HRD+K  N+L+      +L DFGLAR++ + Q+A T  VV T+
Sbjct: 129 FLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSY-QMALTPVVV-TL 183

Query: 534 GYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGK 573
            Y APEV      +T  D++  G +  E+   R+P+  G 
Sbjct: 184 WYRAPEVLLQSTYATPVDMWSVGCIFAEMFR-RKPLFCGN 222

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A* Length = 303

 Score =  100 bits (252), Expect = 1e-23
 Identities = 56/214 (26%), Positives = 97/214 (45%), Gaps = 15/214 (7%)

Query: 366 FSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLA-EISSLGRLKHKSLV 424
           +  + VIG G    V          ++A+KRI+ E    +   L  EI ++ +  H ++V
Sbjct: 17  YELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIV 76

Query: 425 GLRGWCKREKGSLMLVYDYMENGSLD---KWIFQCDGSMMLSCEERI--RVLKDVAAGVL 479
                    K  L LV   +  GS+    K I           +E     +L++V  G+ 
Sbjct: 77  SYYT-SFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLE 135

Query: 480 YLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTR----VVGTVGY 535
           YLH+      +HRD+K+ N+LL ++ + ++ DFG++     G   +  +     VGT  +
Sbjct: 136 YLHK---NGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCW 192

Query: 536 LAPEVFSSGRA-STQTDVFGFGILILEVLSGRRP 568
           +APEV    R    + D++ FGI  +E+ +G  P
Sbjct: 193 MAPEVMEQVRGYDFKADIWSFGITAIELATGAAP 226

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A* Length = 348

 Score =  101 bits (254), Expect = 1e-23
 Identities = 56/210 (26%), Positives = 94/210 (44%), Gaps = 20/210 (9%)

Query: 366 FSEENVIGVGGNGKVYKGVLEGGGAEIAVKRIS---HENDGGTRAFLAEISSLGRLKHKS 422
           FS+   IG G  G VY          +A+K++S    +++   +  + E+  L +L+H +
Sbjct: 56  FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 115

Query: 423 LVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIR-VLKDVAAGVLYL 481
            +  RG C   + +  LV +Y    + D  +      +    E  I  V      G+ YL
Sbjct: 116 TIQYRG-CYLREHTAWLVMEYCLGSASDL-LEVHKKPLQ---EVEIAAVTHGALQGLAYL 170

Query: 482 HEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVF 541
           H      ++HRD+K+ N+LL +    +LGDFG A       +A     VGT  ++APEV 
Sbjct: 171 HS---HNMIHRDVKAGNILLSEPGLVKLGDFGSA-----SIMAPANSFVGTPYWMAPEVI 222

Query: 542 SSGRAST---QTDVFGFGILILEVLSGRRP 568
            +        + DV+  GI  +E+   + P
Sbjct: 223 LAMDEGQYDGKVDVWSLGITCIELAERKPP 252

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ... Length = 334

 Score =  101 bits (253), Expect = 2e-23
 Identities = 73/340 (21%), Positives = 140/340 (41%), Gaps = 64/340 (18%)

Query: 343 EDWELEYWPHRITYQEIEAATKGFSEENVIGVGGNGKVYKGVLEGGGAE-------IAVK 395
           ED + E+   ++T  +             +G G  G+V      G   +       +AVK
Sbjct: 26  EDPKWEFPRDKLTLGK------------PLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVK 73

Query: 396 RI-SHENDGGTRAFLAEISSLGRL-KHKSLVGLRGWCKREKGSLMLVYDYMENGSL---- 449
            +     +      ++E+  +  + KHK+++ L G C ++ G L ++ +Y   G+L    
Sbjct: 74  MLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD-GPLYVIVEYASKGNLREYL 132

Query: 450 ---------DKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVL 500
                      +         ++ ++ +     +A G+ YL     +K +HRD+ + NVL
Sbjct: 133 RARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLAS---QKCIHRDLAARNVL 189

Query: 501 LDKEMNGRLGDFGLAR-MHGHGQVASTTRVVGTVGYL-----APEVFSSGRASTQTDVFG 554
           + +    ++ DFGLAR ++             T G L     APE       + Q+DV+ 
Sbjct: 190 VTENNVMKIADFGLARDINNID-----YYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWS 244

Query: 555 FGILILEVLS-GRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRAKGGFDEDEVERVLH 613
           FG+L+ E+ + G  P   G P   E +++L+ +G  +D              +E+  ++ 
Sbjct: 245 FGVLMWEIFTLGGSPY-PGIPV--EELFKLLKEGHRMDKPA--------NCTNELYMMM- 292

Query: 614 LGLLCAYPDPRARPTMRQVVKVLEGKIEAGIENETEDMDA 653
               C +  P  RPT +Q+V+ L+  +      E  D+  
Sbjct: 293 --RDCWHAVPSQRPTFKQLVEDLDRILTLTTNEEYLDLSQ 330

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A* Length = 329

 Score =  100 bits (252), Expect = 2e-23
 Identities = 59/209 (28%), Positives = 94/209 (44%), Gaps = 17/209 (8%)

Query: 366 FSEENVIGVGGNGKVYKGVLEGGGAEIAVKRI--SHENDGGTRAFLAEISSLGRLKHKSL 423
           +     +G G  G+VYK +       +A+KRI   HE +G     + E+S L  L+H+++
Sbjct: 36  YRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNI 95

Query: 424 VGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHE 483
           + L+         L L+++Y EN  L K++   D +  +S       L  +  GV + H 
Sbjct: 96  IELKSVI-HHNHRLHLIFEYAEN-DLKKYM---DKNPDVSMRVIKSFLYQLINGVNFCHS 150

Query: 484 GWEKKVLHRDIKSSNVLLDKEMNGR-----LGDFGLARMHGHGQVASTTRVVGTVGYLAP 538
                 LHRD+K  N+LL            +GDFGLAR  G      T  ++ T+ Y  P
Sbjct: 151 RR---CLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPIRQFTHEII-TLWYRPP 206

Query: 539 EV-FSSGRASTQTDVFGFGILILEVLSGR 566
           E+   S   ST  D++    +  E+L   
Sbjct: 207 EILLGSRHYSTSVDIWSIACIWAEMLMKT 235

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} Length = 504

 Score =  102 bits (256), Expect = 4e-23
 Identities = 63/287 (21%), Positives = 112/287 (39%), Gaps = 51/287 (17%)

Query: 369 ENVIGVGGNGKVYKGVLEGGGAEIAVKRIS-------------HENDGGTRAFLAEISSL 415
              +G G  G+V     + G +E A+K I                 +        EIS L
Sbjct: 41  VRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLL 100

Query: 416 GRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVA 475
             L H +++ L    + +K    LV ++ E G L + I            +   ++K + 
Sbjct: 101 KSLDHPNIIKLFDVFE-DKKYFYLVTEFYEGGELFEQIINRH---KFDECDAANIMKQIL 156

Query: 476 AGVLYLHEGWEKKVLHRDIKSSNVLL-DKEMNGRL--GDFGLARMHGHGQVASTTRVVGT 532
           +G+ YLH+     ++HRDIK  N+LL +K     +   DFGL+              +GT
Sbjct: 157 SGICYLHK---HNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYKLRD--RLGT 211

Query: 533 VGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRP-IEEGKPNLVEMVWELMVQGKLLD 591
             Y+APEV    + + + DV+  G+++  +L G  P   +   ++++ V           
Sbjct: 212 AYYIAPEVLK-KKYNEKCDVWSCGVIMYILLCGYPPFGGQNDQDIIKKV----------- 259

Query: 592 ALDARLRAKGGFDEDEVERV------LHLGLLCAYPDPRARPTMRQV 632
                 + K  FD ++ + +      L   +L    D   R T  + 
Sbjct: 260 -----EKGKYYFDFNDWKNISDEAKELIKLMLT--YDYNKRCTAEEA 299

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens} Length = 382

 Score =  100 bits (252), Expect = 4e-23
 Identities = 80/354 (22%), Positives = 142/354 (40%), Gaps = 75/354 (21%)

Query: 343 EDWELEYWPHRITYQEIEAATKGFSEENVIGVGGNGKVYKGVLEGGGAE-------IAVK 395
             WEL     R+   +             +G G  G+V      G   +       +AVK
Sbjct: 62  PRWELP--RDRLVLGK------------PLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVK 107

Query: 396 RISHENDGGT----RAFLAEISSLGRL-KHKSLVGLRGWCKREKGSLMLVYDYMENGSL- 449
            +       T       ++E+  +  + KHK+++ L G C ++ G L ++ +Y   G+L 
Sbjct: 108 ML---KSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQD-GPLYVIVEYASKGNLR 163

Query: 450 ------------DKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSS 497
                         +    +    LS ++ +     VA G+ YL     KK +HRD+ + 
Sbjct: 164 EYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLAS---KKCIHRDLAAR 220

Query: 498 NVLLDKEMNGRLGDFGLAR-MHGHGQVASTTRVVGTVGYL-----APEVFSSGRASTQTD 551
           NVL+ ++   ++ DFGLAR +H             T G L     APE       + Q+D
Sbjct: 221 NVLVTEDNVMKIADFGLARDIHHID-----YYKKTTNGRLPVKWMAPEALFDRIYTHQSD 275

Query: 552 VFGFGILILEVLS-GRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRAKGGFDEDEVER 610
           V+ FG+L+ E+ + G  P   G P   E +++L+ +G  +D              +E+  
Sbjct: 276 VWSFGVLLWEIFTLGGSPY-PGVPV--EELFKLLKEGHRMDKPS--------NCTNELYM 324

Query: 611 VLHLGLLCAYPDPRARPTMRQVVKVLEGKIEAGIENETEDMDAYLLQQVKSKDM 664
           ++     C +  P  RPT +Q+V+ L+  +        ++M  Y        D+
Sbjct: 325 MM---RDCWHAVPSQRPTFKQLVEDLDRIVA---LTSNQEMGYYHHHHHHDYDI 372

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens} Length = 349

 Score =  100 bits (250), Expect = 5e-23
 Identities = 66/273 (24%), Positives = 107/273 (39%), Gaps = 40/273 (14%)

Query: 371 VIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWC 430
            +G G    VY+   +G     A+K +    D   +    EI  L RL H +++ L+   
Sbjct: 60  ELGRGATSIVYRCKQKGTQKPYALKVLKKTVD--KKIVRTEIGVLLRLSHPNIIKLKEIF 117

Query: 431 KREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVL 490
           +     + LV + +  G L   I +  G    S  +    +K +   V YLHE     ++
Sbjct: 118 E-TPTEISLVLELVTGGELFDRIVE-KGY--YSERDAADAVKQILEAVAYLHE---NGIV 170

Query: 491 HRDIKSSNVLL---DKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRAS 547
           HRD+K  N+L      +   ++ DFGL+++  H  +  T  V GT GY APE+       
Sbjct: 171 HRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQVLMKT--VCGTPGYCAPEILRGCAYG 228

Query: 548 TQTDVFGFG-IL-ILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRAKGGFDE 605
            + D++  G I  IL  L G  P            ++      +   +   L  +  F  
Sbjct: 229 PEVDMWSVGIITYIL--LCGFEP-----------FYDERGDQFMFRRI---LNCEYYFIS 272

Query: 606 DEVERV------LHLGLLCAYPDPRARPTMRQV 632
              + V      L   L+    DP+ R T  Q 
Sbjct: 273 PWWDEVSLNAKDLVRKLIV--LDPKKRLTTFQA 303

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 3lau_A* 2wtv_A* ... Length = 279

 Score = 98.1 bits (245), Expect = 7e-23
 Identities = 48/213 (22%), Positives = 87/213 (40%), Gaps = 15/213 (7%)

Query: 370 NVIGVGGNGKVYKGVLEGGGAEIAVKRISHEN---DGGTRAFLAEISSLGRLKHKSLVGL 426
             +G G  G VY    +     +A+K +        G       E+     L+H +++ L
Sbjct: 15  RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 74

Query: 427 RGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWE 486
            G+       + L+ +Y   G++ + + +         +     + ++A  + Y H    
Sbjct: 75  YGYFHDAT-RVYLILEYAPLGTVYRELQKLSK---FDEQRTATYITELANALSYCHS--- 127

Query: 487 KKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRA 546
           K+V+HRDIK  N+LL      ++ DFG + +H      +     GT+ YL PE+      
Sbjct: 128 KRVIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRTDL--CGTLDYLPPEMIEGRMH 184

Query: 547 STQTDVFGFGILILEVLSGRRPIEEGKPNLVEM 579
             + D++  G+L  E L G+ P E       E 
Sbjct: 185 DEKVDLWSLGVLCYEFLVGKPPFEA--NTYQET 215

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A Length = 370

 Score = 99.7 bits (249), Expect = 9e-23
 Identities = 72/324 (22%), Positives = 137/324 (42%), Gaps = 64/324 (19%)

Query: 343 EDWELEYWPHRITYQEIEAATKGFSEENVIGVGGNGKVYKGVLEGGGAE-------IAVK 395
           ED + E+   ++T  +             +G G  G+V      G   +       +AVK
Sbjct: 72  EDPKWEFPRDKLTLGK------------PLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVK 119

Query: 396 RI-SHENDGGTRAFLAEISSLGRL-KHKSLVGLRGWCKREKGSLMLVYDYMENGSL---- 449
            +     +      ++E+  +  + KHK+++ L G C ++ G L ++ +Y   G+L    
Sbjct: 120 MLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD-GPLYVIVEYASKGNLREYL 178

Query: 450 ---------DKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVL 500
                      +         ++ ++ +     +A G+ YL     +K +HRD+ + NVL
Sbjct: 179 RARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLAS---QKCIHRDLAARNVL 235

Query: 501 LDKEMNGRLGDFGLAR-MHGHGQVASTTRVVGTVGYL-----APEVFSSGRASTQTDVFG 554
           + +    ++ DFGLAR ++             T G L     APE       + Q+DV+ 
Sbjct: 236 VTENNVMKIADFGLARDINNID-----YYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWS 290

Query: 555 FGILILEVLS-GRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRAKGGFDEDEVERVLH 613
           FG+L+ E+ + G  P   G P   E +++L+ +G  +D        K     +E+  ++ 
Sbjct: 291 FGVLMWEIFTLGGSPY-PGIPV--EELFKLLKEGHRMD--------KPANCTNELYMMM- 338

Query: 614 LGLLCAYPDPRARPTMRQVVKVLE 637
               C +  P  RPT +Q+V+ L+
Sbjct: 339 --RDCWHAVPSQRPTFKQLVEDLD 360

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* Length = 484

 Score =  101 bits (253), Expect = 9e-23
 Identities = 70/277 (25%), Positives = 121/277 (43%), Gaps = 41/277 (14%)

Query: 369 ENVIGVGGNGKVYKGVLEGGGAEIAVKRIS---HENDGGTRAFLAEISSLGRLKHKSLVG 425
           + V+G G  G+V     +  G E AVK IS    +      + L E+  L +L H +++ 
Sbjct: 31  QRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMK 90

Query: 426 LRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGW 485
           L  + + +KG   LV +    G L   I         S  +  R+++ V +G+ Y+H+  
Sbjct: 91  LYEFFE-DKGYFYLVGEVYTGGELFDEIISRK---RFSEVDAARIIRQVLSGITYMHK-- 144

Query: 486 EKKVLHRDIKSSNVLL---DKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFS 542
             K++HRD+K  N+LL    K+ N R+ DFGL+      +       +GT  Y+APEV  
Sbjct: 145 -NKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKD--KIGTAYYIAPEVLH 201

Query: 543 SGRASTQTDVFGFGILILEVLSGRRP-IEEGKPNLVEMVWELMVQGKLLDALDARLRAKG 601
            G    + DV+  G+++  +LSG  P     + ++++ V                 + K 
Sbjct: 202 -GTYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKV----------------EKGKY 244

Query: 602 GFDEDEVERV------LHLGLLCAYPDPRARPTMRQV 632
            F+  + ++V      L   +L     P  R + R  
Sbjct: 245 TFELPQWKKVSESAKDLIRKMLT--YVPSMRISARDA 279

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A* Length = 333

 Score = 98.9 bits (247), Expect = 1e-22
 Identities = 73/327 (22%), Positives = 130/327 (39%), Gaps = 65/327 (19%)

Query: 343 EDWELEYWPHRITYQEIEAATKGFSEENVIGVGGNGKVYKGVLEGGGAE-----IAVKRI 397
           E WE     + + +               +G G  GKV +    G G E     +AVK +
Sbjct: 39  EKWEFP--RNNLQF------------GKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKML 84

Query: 398 ---SHENDGGTRAFLAEISSLGRL-KHKSLVGLRGWCKREKGSLMLVYDYMENGSL---- 449
              +H ++    A ++E+  +  L +H+++V L G C    G ++++ +Y   G L    
Sbjct: 85  KSTAHADE--KEALMSELKIMSHLGQHENIVNLLGACTHG-GPVLVITEYCCYGDLLNFL 141

Query: 450 -------DKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLD 502
                  +        +   S  + +     VA G+ +L     K  +HRD+ + NVLL 
Sbjct: 142 RRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLAS---KNCIHRDVAARNVLLT 198

Query: 503 KEMNGRLGDFGLARMHGHGQVASTTR-VVGTVGYL-----APEVFSSGRASTQTDVFGFG 556
                ++GDFGLAR      + + +  +V     L     APE       + Q+DV+ +G
Sbjct: 199 NGHVAKIGDFGLAR-----DIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYG 253

Query: 557 ILILEVLS-GRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRAKGGFDEDEVERVLHLG 615
           IL+ E+ S G  P      N     ++L+  G  +            F    +  ++   
Sbjct: 254 ILLWEIFSLGLNPYPGILVN--SKFYKLVKDGYQMAQPA--------FAPKNIYSIM--- 300

Query: 616 LLCAYPDPRARPTMRQVVKVLEGKIEA 642
             C   +P  RPT +Q+   L+ + + 
Sbjct: 301 QACWALEPTHRPTFQQICSFLQEQAQE 327

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A Length = 365

 Score = 99.4 bits (248), Expect = 1e-22
 Identities = 72/286 (25%), Positives = 112/286 (39%), Gaps = 53/286 (18%)

Query: 371 VIGVGGNGKVYKGVLEGGGAEIAVKRIS--------HENDGGTRAFLAEISSLGRLK-HK 421
           VIG G +  V + V    G E AVK +          + +    A   E   L ++  H 
Sbjct: 101 VIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHP 160

Query: 422 SLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYL 481
            ++ L    +     + LV+D M  G L  ++ +   +  LS +E   +++ +   V +L
Sbjct: 161 HIITLIDSYE-SSSFMFLVFDLMRKGELFDYLTE-KVA--LSEKETRSIMRSLLEAVSFL 216

Query: 482 HEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVF 541
           H      ++HRD+K  N+LLD  M  RL DFG +     G+      + GT GYLAPE+ 
Sbjct: 217 HA---NNIVHRDLKPENILLDDNMQIRLSDFGFSCHLEPGEKLRE--LCGTPGYLAPEIL 271

Query: 542 SSGRASTQT------DVFGFG-IL-ILEVLSGRRP-IEEGKPNLVEMVWELMVQGKLLDA 592
                 T        D++  G IL  L  L+G  P     +  ++ M+            
Sbjct: 272 KCSMDETHPGYGKEVDLWACGVILFTL--LAGSPPFWHRRQILMLRMI------------ 317

Query: 593 LDARLRAKGGFDEDEVERV------LHLGLLCAYPDPRARPTMRQV 632
               +  +  F   E +        L   LL    DP AR T  Q 
Sbjct: 318 ----MEGQYQFSSPEWDDRSSTVKDLISRLLQ--VDPEARLTAEQA 357

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X* Length = 348

 Score = 99.0 bits (247), Expect = 1e-22
 Identities = 49/231 (21%), Positives = 90/231 (38%), Gaps = 29/231 (12%)

Query: 371 VIGVGGNGKVY---------------KGVLEGGGAEIAVKRISHENDGGTRAFLAEISSL 415
            +  G   K+                K +LE                     F  E+  +
Sbjct: 38  TLNQGKFNKIILCEKDNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQII 97

Query: 416 GRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWI-----FQCDGSMMLSCEERIRV 470
             +K++  +   G        + ++Y+YMEN S+ K+         + +  +  +    +
Sbjct: 98  TDIKNEYCLTCEGIITNYD-EVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCI 156

Query: 471 LKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRVV 530
           +K V     Y+H   EK + HRD+K SN+L+DK    +L DFG +      ++  +    
Sbjct: 157 IKSVLNSFSYIHN--EKNICHRDVKPSNILMDKNGRVKLSDFGESEYMVDKKIKGS---R 211

Query: 531 GTVGYLAPEVFSS--GRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEM 579
           GT  ++ PE FS+       + D++  GI +  +     P    K +LVE+
Sbjct: 212 GTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPF-SLKISLVEL 261

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7 Length = 344

 Score = 98.5 bits (246), Expect = 2e-22
 Identities = 73/343 (21%), Positives = 135/343 (39%), Gaps = 68/343 (19%)

Query: 343 EDWELEYWPHRITYQEIEAATKGFSEENVIGVGGNGKVYKGVLEGGGAE-----IAVKRI 397
            D + E+    + + +            V+G G  GKV      G         +AVK +
Sbjct: 36  YDLKWEFPRENLEFGK------------VLGSGAFGKVMNATAYGISKTGVSIQVAVKML 83

Query: 398 -SHENDGGTRAFLAEISSLGRL-KHKSLVGLRGWCKREKGSLMLVYDYMENGSL------ 449
               +     A ++E+  + +L  H+++V L G C    G + L+++Y   G L      
Sbjct: 84  KEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLS-GPIYLIFEYCCYGDLLNYLRS 142

Query: 450 --------------DKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIK 495
                          K + + +   +L+ E+ +     VA G+ +L     K  +HRD+ 
Sbjct: 143 KREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEF---KSCVHRDLA 199

Query: 496 SSNVLLDKEMNGRLGDFGLARMHGHGQVAST-TRVVGTVGYL-----APEVFSSGRASTQ 549
           + NVL+      ++ DFGLAR      + S    VV     L     APE    G  + +
Sbjct: 200 ARNVLVTHGKVVKICDFGLAR-----DIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIK 254

Query: 550 TDVFGFGILILEVLS-GRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRAKGGFDEDEV 608
           +DV+ +GIL+ E+ S G  P      +     ++L+  G  +D        +  +  +E+
Sbjct: 255 SDVWSYGILLWEIFSLGVNPYPGIPVD--ANFYKLIQNGFKMD--------QPFYATEEI 304

Query: 609 ERVLHLGLLCAYPDPRARPTMRQVVKVLEGKIEAGIENETEDM 651
             ++     C   D R RP+   +   L  ++    E   +++
Sbjct: 305 YIIM---QSCWAFDSRKRPSFPNLTSFLGCQLADAEEAMYQNV 344

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens} Length = 405

 Score = 99.5 bits (248), Expect = 2e-22
 Identities = 59/218 (27%), Positives = 95/218 (43%), Gaps = 23/218 (10%)

Query: 372 IGVGGNGKVYKGV--LEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGW 429
           +G G  G VYK          + A+K+I  E  G + +   EI+ L  LKH +++ L+  
Sbjct: 29  VGRGTYGHVYKAKRKDGKDDKDYALKQI--EGTGISMSACREIALLRELKHPNVISLQKV 86

Query: 430 C-KREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERI------RVLKDVAAGVLYLH 482
                   + L++DY E+  L   I     S       ++       +L  +  G+ YLH
Sbjct: 87  FLSHADRKVWLLFDYAEH-DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLH 145

Query: 483 EGWEKKVLHRDIKSSNVLLDKEMNGR----LGDFGLARMHG--HGQVASTTRVVGTVGYL 536
             W   VLHRD+K +N+L+  E   R    + D G AR+       +A    VV T  Y 
Sbjct: 146 ANW---VLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYR 202

Query: 537 APEV-FSSGRASTQTDVFGFGILILEVLSGRRPIEEGK 573
           APE+   +   +   D++  G +  E+L+   PI   +
Sbjct: 203 APELLLGARHYTKAIDIWAIGCIFAELLT-SEPIFHCR 239

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B Length = 543

 Score =  100 bits (251), Expect = 2e-22
 Identities = 56/207 (27%), Positives = 96/207 (46%), Gaps = 9/207 (4%)

Query: 366 FSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHE---NDGGTRAFLAEISSLGRLKHKS 422
           F +  V+G GG G+V+   ++  G   A K+++ +      G +  + E   L ++  + 
Sbjct: 187 FLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRF 246

Query: 423 LVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRV-LKDVAAGVLYL 481
           +V L  +    K  L LV   M  G +   I+  D       E R       + +G+ +L
Sbjct: 247 IVSLA-YAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHL 305

Query: 482 HEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVF 541
           H+   + +++RD+K  NVLLD + N R+ D GLA     GQ  +     GT G++APE+ 
Sbjct: 306 HQ---RNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGY-AGTPGFMAPELL 361

Query: 542 SSGRASTQTDVFGFGILILEVLSGRRP 568
                    D F  G+ + E+++ R P
Sbjct: 362 LGEEYDFSVDYFALGVTLYEMIAARGP 388

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A* Length = 313

 Score = 97.3 bits (243), Expect = 2e-22
 Identities = 69/324 (21%), Positives = 128/324 (39%), Gaps = 55/324 (16%)

Query: 343 EDWELEYWPHRITYQEIEAATKGFSEENVIGVGGNGKVYKGVLEG-----GGAEIAVKRI 397
             WE     +R+++ +             +G G  GKV +    G         +AVK +
Sbjct: 16  HKWEFP--RNRLSFGK------------TLGAGAFGKVVEATAYGLIKSDAAMTVAVKML 61

Query: 398 -SHENDGGTRAFLAEISSLGRL-KHKSLVGLRGWCKREKGSLMLVYDYMENGSL------ 449
               +     A ++E+  L  L  H ++V L G C    G  +++ +Y   G L      
Sbjct: 62  KPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIG-GPTLVITEYCCYGDLLNFLRR 120

Query: 450 ---------DKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVL 500
                           D  + L  E+ +     VA G+ +L     K  +HRD+ + N+L
Sbjct: 121 KRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLAS---KNCIHRDLAARNIL 177

Query: 501 LDKEMNGRLGDFGLAR-MHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILI 559
           L      ++ DFGLAR +               V ++APE   +   + ++DV+ +GI +
Sbjct: 178 LTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFL 237

Query: 560 LEVLS-GRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRAKGGFDEDEVERVLHLGLLC 618
            E+ S G  P      +     ++++ +G  + + +            E+  ++     C
Sbjct: 238 WELFSLGSSPYPGMPVD--SKFYKMIKEGFRMLSPE--------HAPAEMYDIM---KTC 284

Query: 619 AYPDPRARPTMRQVVKVLEGKIEA 642
              DP  RPT +Q+V+++E +I  
Sbjct: 285 WDADPLKRPTFKQIVQLIEKQISE 308

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A* Length = 284

 Score = 96.5 bits (241), Expect = 3e-22
 Identities = 67/288 (23%), Positives = 108/288 (37%), Gaps = 47/288 (16%)

Query: 363 TKGFSEE----NVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGG--TRAFLAEISSLG 416
           +  FS+       +G G    V + V +  G E A K I+ +       +    E     
Sbjct: 1   STKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICR 60

Query: 417 RLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAA 476
           +L+H ++V L     +E+    LV+D +  G L + I         S  +    ++ +  
Sbjct: 61  KLQHPNIVRLHDSI-QEESFHYLVFDLVTGGELFEDIVA---REFYSEADASHCIQQILE 116

Query: 477 GVLYLHEGWEKKVLHRDIKSSNVLLDKEMNG---RLGDFGLARMHGHGQVASTTRVVGTV 533
            + Y H      ++HR++K  N+LL  +  G   +L DFGLA      +        GT 
Sbjct: 117 SIAYCHS---NGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHG--FAGTP 171

Query: 534 GYLAPEVFSSGRASTQTDVFGFG-IL-ILEVLSGRRP-IEEGKPNLVEMVWELMVQGKLL 590
           GYL+PEV      S   D++  G IL IL  L G  P  +E +  L   +          
Sbjct: 172 GYLSPEVLKKDPYSKPVDIWACGVILYIL--LVGYPPFWDEDQHRLYAQI---------- 219

Query: 591 DALDARLRAKGGFDEDEVERV------LHLGLLCAYPDPRARPTMRQV 632
                       +   E + V      L   +L    +P+ R T  Q 
Sbjct: 220 ------KAGAYDYPSPEWDTVTPEAKSLIDSMLT--VNPKKRITADQA 259

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A Length = 304

 Score = 96.9 bits (242), Expect = 3e-22
 Identities = 70/276 (25%), Positives = 109/276 (39%), Gaps = 42/276 (15%)

Query: 369 ENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRG 428
             V+G G   +V+       G   A+K I         +   EI+ L ++KH+++V L  
Sbjct: 14  MEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLED 73

Query: 429 WCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKK 488
             +       LV   +  G L   I +  G    + ++   V++ V + V YLH   E  
Sbjct: 74  IYE-STTHYYLVMQLVSGGELFDRILE-RGV--YTEKDASLVIQQVLSAVKYLH---ENG 126

Query: 489 VLHRDIKSSNVLL-DKEMNGRL--GDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGR 545
           ++HRD+K  N+L    E N ++   DFGL++M  +G     +   GT GY+APEV +   
Sbjct: 127 IVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNGI---MSTACGTPGYVAPEVLAQKP 183

Query: 546 ASTQTDVFGFG-IL-ILEVLSGRRP-IEEGKPNLVEMVWELMVQGKLLDALDARLRAKGG 602
            S   D +  G I  IL  L G  P  EE +  L E +                      
Sbjct: 184 YSKAVDCWSIGVITYIL--LCGYPPFYEETESKLFEKI----------------KEGYYE 225

Query: 603 FDEDEVERV------LHLGLLCAYPDPRARPTMRQV 632
           F+    + +          LL    DP  R T  + 
Sbjct: 226 FESPFWDDISESAKDFICHLLE--KDPNERYTCEKA 259

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II} Length = 345

 Score = 97.6 bits (243), Expect = 4e-22
 Identities = 55/318 (17%), Positives = 100/318 (31%), Gaps = 78/318 (24%)

Query: 371 VIGVGGNGKVYKGVLEGGGAEIAVKRIS-----HENDGGTRAFLAEISSLGRLKHKSLVG 425
            IG G  G V   +     A  A+K ++       N         E+  + +L H ++  
Sbjct: 33  AIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIAR 92

Query: 426 LRGWCKREKGSLMLVYDYMENGSL------------------------------------ 449
           L    + ++  + LV +    G L                                    
Sbjct: 93  LYEVYE-DEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAIN 151

Query: 450 -DKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGR 508
                F+     +   +    +++ + + + YLH    + + HRDIK  N L     +  
Sbjct: 152 GSIHGFRESLDFVQREKLISNIMRQIFSALHYLHN---QGICHRDIKPENFLFSTNKSFE 208

Query: 509 L--GDFGLARMHGH---GQVASTTRVVGTVGYLAPEVFSSGRAS--TQTDVFGFGILILE 561
           +   DFGL++       G+    T   GT  ++APEV ++   S   + D +  G+L+  
Sbjct: 209 IKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAGVLLHL 268

Query: 562 VLSGRRP-IEEGKPNLVEMVWELMVQGKLLDALDARLRAKGGFDEDEVERV------LHL 614
           +L G  P       + +  V                L  K  F+      +      L  
Sbjct: 269 LLMGAVPFPGVNDADTISQV----------------LNKKLCFENPNYNVLSPLARDLLS 312

Query: 615 GLLCAYPDPRARPTMRQV 632
            LL    +   R    + 
Sbjct: 313 NLLN--RNVDERFDAMRA 328

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A* Length = 287

 Score = 96.1 bits (240), Expect = 4e-22
 Identities = 70/276 (25%), Positives = 115/276 (41%), Gaps = 44/276 (15%)

Query: 371 VIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGG--TRAFLAEISSLGRLKHKSLVGLRG 428
           ++G G  G+V K        E AVK I+  +     T   L E+  L +L H +++ L  
Sbjct: 29  MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFE 88

Query: 429 WCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKK 488
             + +  S  +V +    G L   I +       S  +  R++K V +G+ Y+H+     
Sbjct: 89  ILE-DSSSFYIVGELYTGGELFDEIIK---RKRFSEHDAARIIKQVFSGITYMHK---HN 141

Query: 489 VLHRDIKSSNVLL---DKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGR 545
           ++HRD+K  N+LL   +K+ + ++ DFGL+              +GT  Y+APEV   G 
Sbjct: 142 IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKD--RIGTAYYIAPEVLR-GT 198

Query: 546 ASTQTDVFGFG-IL-ILEVLSGRRP-IEEGKPNLVEMVWELMVQGKLLDALDARLRAKGG 602
              + DV+  G IL IL  LSG  P   + + ++++ V                   K  
Sbjct: 199 YDEKCDVWSAGVILYIL--LSGTPPFYGKNEYDILKRV----------------ETGKYA 240

Query: 603 FDEDEVERV------LHLGLLCAYPDPRARPTMRQV 632
           FD  +   +      L   +L     P  R T  Q 
Sbjct: 241 FDLPQWRTISDDAKDLIRKMLT--FHPSLRITATQC 274

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A* Length = 314

 Score = 96.9 bits (242), Expect = 4e-22
 Identities = 75/334 (22%), Positives = 138/334 (41%), Gaps = 69/334 (20%)

Query: 338 EREEMEDWELEYWPHRITYQEIEAATKGFSEENVIGVGGNGKVYKGVLEG-----GGAEI 392
             + +ED + E+    +   +             +G G  GKV K          G   +
Sbjct: 9   AFKILEDPKWEFPRKNLVLGK------------TLGEGEFGKVVKATAFHLKGRAGYTTV 56

Query: 393 AVKRI-SHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSL-- 449
           AVK +  + +    R  L+E + L ++ H  ++ L G C ++ G L+L+ +Y + GSL  
Sbjct: 57  AVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQD-GPLLLIVEYAKYGSLRG 115

Query: 450 -------------------DKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVL 490
                              +           L+  + I     ++ G+ YL E    K++
Sbjct: 116 FLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAE---MKLV 172

Query: 491 HRDIKSSNVLLDKEMNGRLGDFGLAR-MHGHGQVASTTRVVGTVGYL-----APEVFSSG 544
           HRD+ + N+L+ +    ++ DFGL+R ++        + V  + G +     A E     
Sbjct: 173 HRDLAARNILVAEGRKMKISDFGLSRDVYEED-----SYVKRSQGRIPVKWMAIESLFDH 227

Query: 545 RASTQTDVFGFGILILEVLS-GRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRAKGGF 603
             +TQ+DV+ FG+L+ E+++ G  P   G P   E ++ L+  G  ++  D         
Sbjct: 228 IYTTQSDVWSFGVLLWEIVTLGGNPY-PGIPP--ERLFNLLKTGHRMERPD--------N 276

Query: 604 DEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLE 637
             +E+ R++   L C   +P  RP    + K LE
Sbjct: 277 CSEEMYRLM---LQCWKQEPDKRPVFADISKDLE 307

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A* Length = 576

 Score = 99.9 bits (249), Expect = 5e-22
 Identities = 61/207 (29%), Positives = 96/207 (46%), Gaps = 12/207 (5%)

Query: 366 FSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHEN---DGGTRAFLAEISSLGRLKHKS 422
           F +  V+G GG G+V    +   G   A K++  +      G    L E   L ++  + 
Sbjct: 186 FRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRF 245

Query: 423 LVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRV-LKDVAAGVLYL 481
           +V L  +    K +L LV   M  G L   I+   G      E R      ++  G+  L
Sbjct: 246 VVSLA-YAYETKDALCLVLTLMNGGDLKFHIYHM-GQAGFP-EARAVFYAAEICCGLEDL 302

Query: 482 HEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVF 541
           H    +++++RD+K  N+LLD   + R+ D GLA     GQ       VGTVGY+APEV 
Sbjct: 303 HR---ERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKG--RVGTVGYMAPEVV 357

Query: 542 SSGRASTQTDVFGFGILILEVLSGRRP 568
            + R +   D +  G L+ E+++G+ P
Sbjct: 358 KNERYTFSPDWWALGCLLYEMIAGQSP 384

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7 Length = 346

 Score = 97.3 bits (243), Expect = 5e-22
 Identities = 67/211 (31%), Positives = 103/211 (48%), Gaps = 17/211 (8%)

Query: 366 FSEENVIGVGGNGKVYKGVLEGGGAEIAVKRI-----SHENDGGTRAFLAEISSLGRLKH 420
           + + + +G G    VYK   +     +A+K+I     S   DG  R  L EI  L  L H
Sbjct: 12  YEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSH 71

Query: 421 KSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIR-VLKDVAAGVL 479
            +++GL       K ++ LV+D+ME   L+  I      +  S    I+  +     G+ 
Sbjct: 72  PNIIGLLD-AFGHKSNISLVFDFMET-DLEVIIKDNSLVLTPS---HIKAYMLMTLQGLE 126

Query: 480 YLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPE 539
           YLH+ W   +LHRD+K +N+LLD+    +L DFGLA+  G    A T +VV T  Y APE
Sbjct: 127 YLHQHW---ILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYTHQVV-TRWYRAPE 182

Query: 540 V-FSSGRASTQTDVFGFGILILEVLSGRRPI 569
           + F +       D++  G ++ E+L  R P 
Sbjct: 183 LLFGARMYGVGVDMWAVGCILAELLL-RVPF 212

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens} Length = 373

 Score = 97.5 bits (243), Expect = 5e-22
 Identities = 59/207 (28%), Positives = 98/207 (47%), Gaps = 14/207 (6%)

Query: 366 FSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVG 425
            S+  ++G G  G+V+K      G ++A K I             EIS + +L H +L+ 
Sbjct: 91  VSKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQ 150

Query: 426 LRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGW 485
           L    +  K  ++LV +Y++ G L   I   D S  L+  + I  +K +  G+ ++H   
Sbjct: 151 LYDAFE-SKNDIVLVMEYVDGGELFDRI--IDESYNLTELDTILFMKQICEGIRHMH--- 204

Query: 486 EKKVLHRDIKSSNVLLDKEMNGRL--GDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSS 543
           +  +LH D+K  N+L       ++   DFGLAR +   +        GT  +LAPEV + 
Sbjct: 205 QMYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREKLKV--NFGTPEFLAPEVVNY 262

Query: 544 GRASTQTDVFGFGIL--ILEVLSGRRP 568
              S  TD++  G++  +L  LSG  P
Sbjct: 263 DFVSFPTDMWSVGVIAYML--LSGLSP 287

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A Length = 419

 Score = 97.5 bits (243), Expect = 9e-22
 Identities = 67/305 (21%), Positives = 113/305 (37%), Gaps = 54/305 (17%)

Query: 354 ITYQEIEAATKGFSEE----NVIGVGGNGKVYKGVLEGGGAEIAVKRIS--------HEN 401
           +T  +     K   +E      +G G  G+V          ++A++ IS           
Sbjct: 121 LTVDDQSVYPKALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSARE 180

Query: 402 DGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMM 461
                    EI  L +L H  ++ ++ +   +     +V + ME G L   +     +  
Sbjct: 181 ADPALNVETEIEILKKLNHPCIIKIKNFF--DAEDYYIVLELMEGGELFDKVVG---NKR 235

Query: 462 LSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLL---DKEMNGRLGDFGLARMH 518
           L           +   V YLHE     ++HRD+K  NVLL   +++   ++ DFG +++ 
Sbjct: 236 LKEATCKLYFYQMLLAVQYLHE---NGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL 292

Query: 519 GHGQVASTTRVVGTVGYLAPEVFSSGRA---STQTDVFGFGILILEVLSGRRP--IEEGK 573
           G   +  T  + GT  YLAPEV  S      +   D +  G+++   LSG  P      +
Sbjct: 293 GETSLMRT--LCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQ 350

Query: 574 PNLVEMVWELMVQGKLLDALDARLRAKGGFDEDEVERV----LHL--GLLCAYPDPRARP 627
            +L + +                   K  F  +    V    L L   LL    DP+AR 
Sbjct: 351 VSLKDQI----------------TSGKYNFIPEVWAEVSEKALDLVKKLLV--VDPKARF 392

Query: 628 TMRQV 632
           T  + 
Sbjct: 393 TTEEA 397

>1qmo_A Mannose binding lectin, FRIL; crosslink, hematopoietic progenitor, sugar complex; HET: MAN; 3.5A {Dolichos lab lab} SCOP: b.29.1.1 Length = 113

 Score = 89.6 bits (222), Expect = 1e-21
 Identities = 27/114 (23%), Positives = 43/114 (37%), Gaps = 10/114 (8%)

Query: 24  SAVDFVFNGF--NSSNLSLYGTATVESRILTLTN------STTFTIGRALYPSKIPTKRP 75
            ++ F F  F  N  +L   G AT  + +L +T         + + GR LY + +     
Sbjct: 2   QSLSFSFTKFDPNQEDLIFQGHATSTNNVLQVTKLDSAGNPVSSSAGRVLYSAPLRL-WE 60

Query: 76  NSSYVYPFSTSFIFAMAPYKGVLAGHGLVFLFVPFHGIKGATEAQHLGLFNRTN 129
           +S+ +  F T   F ++         GL F   P   +        LGLF   N
Sbjct: 61  DSAVLTSFDTIINFEISTPYTSRIADGLAFFIAPPDSVISYH-GGFLGLFPNAN 113

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A* Length = 486

 Score = 97.8 bits (244), Expect = 1e-21
 Identities = 67/276 (24%), Positives = 113/276 (40%), Gaps = 40/276 (14%)

Query: 369 ENVIGVGGNGKVYKGVLEGGGAEIAVKRI--SHENDGGTRAFLAEISSLGRLKHKSLVGL 426
             ++G G  G+V K        E AVK I  +   +  T   L E+  L +L H +++ L
Sbjct: 27  VCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKL 86

Query: 427 RGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWE 486
               + +  S  +V +    G L   I +       S  +  R++K V +G+ Y+H+   
Sbjct: 87  FEILE-DSSSFYIVGELYTGGELFDEIIKRK---RFSEHDAARIIKQVFSGITYMHK--- 139

Query: 487 KKVLHRDIKSSNVLL-DKEMNGRL--GDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSS 543
             ++HRD+K  N+LL  KE +  +   DFGL+              +GT  Y+APEV   
Sbjct: 140 HNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKD--RIGTAYYIAPEVLR- 196

Query: 544 GRASTQTDVFGFGILILEVLSGRRP-IEEGKPNLVEMVWELMVQGKLLDALDARLRAKGG 602
           G    + DV+  G+++  +LSG  P   + + ++++ V                   K  
Sbjct: 197 GTYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRV----------------ETGKYA 240

Query: 603 FDEDEVERV------LHLGLLCAYPDPRARPTMRQV 632
           FD  +   +      L   +L     P  R T  Q 
Sbjct: 241 FDLPQWRTISDDAKDLIRKMLT--FHPSLRITATQC 274

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A Length = 316

 Score = 95.0 bits (237), Expect = 2e-21
 Identities = 65/302 (21%), Positives = 109/302 (36%), Gaps = 64/302 (21%)

Query: 369 ENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLK-HKSLVGLR 427
           E+V+G G + +V   +      E AVK I  +          E+  L + + H++++ L 
Sbjct: 18  EDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELI 77

Query: 428 GWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERI------------RVLKDVA 475
            + + E+    LV++ M  GS+                  I             V++DVA
Sbjct: 78  EFFE-EEDRFYLVFEKMRGGSI----L-----------SHIHKRRHFNELEASVVVQDVA 121

Query: 476 AGVLYLHEGWEKKVLHRDIKSSNVLL---DKEMNGRLGDFGLARMHGHGQVASTTR---- 528
           + + +LH    K + HRD+K  N+L    ++    ++ DF L          S       
Sbjct: 122 SALDFLH---NKGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPEL 178

Query: 529 --VVGTVGYLAPEVFSSGRASTQT-----DVFGFG-IL-ILEVLSGRRP---IEEGKPNL 576
               G+  Y+APEV  +            D++  G IL IL  LSG  P           
Sbjct: 179 LTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYIL--LSGYPPFVGRCGSDCGW 236

Query: 577 VEMVWELMVQGKLLDALDARLRAKGGFDEDEVERV------LHLGLLCAYPDPRARPTMR 630
                    Q  L +++      K  F + +   +      L   LL    D + R +  
Sbjct: 237 DRGEACPACQNMLFESI---QEGKYEFPDKDWAHISCAAKDLISKLLV--RDAKQRLSAA 291

Query: 631 QV 632
           QV
Sbjct: 292 QV 293

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B* Length = 389

 Score = 96.1 bits (239), Expect = 2e-21
 Identities = 47/217 (21%), Positives = 79/217 (36%), Gaps = 21/217 (9%)

Query: 366 FSEENVIGVGGN--GKVYKGVLEGGGAEIAVKRIS--HENDGGTRAFLAEISSLGRLKHK 421
           +    VIG G      V     +  G  + V+RI+    ++        E+       H 
Sbjct: 27  YELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHP 86

Query: 422 SLVGLRGWCKREKGSLMLVYDYMENGSL-DKWIFQCDGSMMLSCEERIR-VLKDVAAGVL 479
           ++V  R         L +V  +M  GS  D         M    E  I  +L+ V   + 
Sbjct: 87  NIVPYRA-TFIADNELWVVTSFMAYGSAKDLICTHFMDGMN---ELAIAYILQGVLKALD 142

Query: 480 YLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFG-LARMHGHGQVAST-----TRVVGTV 533
           Y+H       +HR +K+S++L+  +    L        M  HGQ            V  +
Sbjct: 143 YIHH---MGYVHRSVKASHILISVDGKVYLSGLRSNLSMISHGQRQRVVHDFPKYSVKVL 199

Query: 534 GYLAPEVFSSGRA--STQTDVFGFGILILEVLSGRRP 568
            +L+PEV          ++D++  GI   E+ +G  P
Sbjct: 200 PWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVP 236

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A* Length = 336

 Score = 95.1 bits (237), Expect = 2e-21
 Identities = 64/307 (20%), Positives = 112/307 (36%), Gaps = 51/307 (16%)

Query: 350 WPHRITYQEIEAATKGFSE-----ENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGG 404
               + +Q  E      ++     + V+G+G NGKV +      G + A+K +       
Sbjct: 10  SGLEVLFQGPEPKKYAVTDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSPKAR 69

Query: 405 TRAFLAEISSLGRL-KHKSLVGLRGWC---KREKGSLMLVYDYMENGSL-DKWIFQCDGS 459
                 E+    +      +V +          K  L+++ + ME G L  +   +  G 
Sbjct: 70  Q-----EVDHHWQASGGPHIVCILDVYENMHHGKRCLLIIMECMEGGELFSRIQER--GD 122

Query: 460 MMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLL-DKEMNG--RLGDFGLAR 516
              +  E   +++D+   + +LH      + HRD+K  N+L   KE +   +L DFG A+
Sbjct: 123 QAFTEREAAEIMRDIGTAIQFLHS---HNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAK 179

Query: 517 MHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGIL--ILEVLSGRRP-IEEGK 573
                 + +      T  Y+APEV    +     D++  G++  IL  L G  P      
Sbjct: 180 ETTQNALQT---PCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYIL--LCGFPPFYSNTG 234

Query: 574 PNLVEMVWELMVQGKLLDALDARLRAKGGFDEDEVERV------LHLGLLCAYPDPRARP 627
             +   +   +  G+             GF   E   V      L   LL    DP  R 
Sbjct: 235 QAISPGMKRRIRLGQY------------GFPNPEWSEVSEDAKQLIRLLLK--TDPTERL 280

Query: 628 TMRQVVK 634
           T+ Q + 
Sbjct: 281 TITQFMN 287

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A* Length = 322

 Score = 94.7 bits (236), Expect = 2e-21
 Identities = 71/286 (24%), Positives = 109/286 (38%), Gaps = 54/286 (18%)

Query: 371 VIGVGGNGKVYKGVLEGGGAEIAVKRIS--------HENDGGTRAFLAEISSLGRLKHKS 422
            +G G  G+V          ++A+K IS                    EI  L +L H  
Sbjct: 17  TLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPC 76

Query: 423 LVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERI--RVLKDVAAGVLY 480
           ++ ++ +   +     +V + ME G L   +   +  +    +E         +   V Y
Sbjct: 77  IIKIKNFF--DAEDYYIVLELMEGGELFDKVVG-NKRL----KEATCKLYFYQMLLAVQY 129

Query: 481 LHEGWEKKVLHRDIKSSNVLL---DKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLA 537
           LHE     ++HRD+K  NVLL   +++   ++ DFG +++ G   +  T  + GT  YLA
Sbjct: 130 LHE---NGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRT--LCGTPTYLA 184

Query: 538 PEVFSSGRA---STQTDVFGFG-IL-ILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDA 592
           PEV  S      +   D +  G IL I   LSG  P             E   Q  L D 
Sbjct: 185 PEVLVSVGTAGYNRAVDCWSLGVILFIC--LSGYPPF-----------SEHRTQVSLKDQ 231

Query: 593 LDARLRAKGGFDEDEVERV----LHL--GLLCAYPDPRARPTMRQV 632
           +      K  F  +    V    L L   LL    DP+AR T  + 
Sbjct: 232 I---TSGKYNFIPEVWAEVSEKALDLVKKLLV--VDPKARFTTEEA 272

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A Length = 325

 Score = 94.3 bits (235), Expect = 3e-21
 Identities = 63/292 (21%), Positives = 108/292 (36%), Gaps = 63/292 (21%)

Query: 369 ENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLK-HKSLVGLR 427
           +  +G G      K V +      AVK IS   +  T+    EI++L   + H ++V L 
Sbjct: 16  DKPLGEGSFSICRKCVHKKSNQAFAVKIISKRMEANTQK---EITALKLCEGHPNIVKLH 72

Query: 428 GWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERI------------RVLKDVA 475
                ++    LV + +  G L    F           ERI             +++ + 
Sbjct: 73  EVFH-DQLHTFLVMELLNGGEL----F-----------ERIKKKKHFSETEASYIMRKLV 116

Query: 476 AGVLYLHEGWEKKVLHRDIKSSNVLL---DKEMNGRLGDFGLAR-MHGHGQVASTTRVVG 531
           + V ++H+     V+HRD+K  N+L    +  +  ++ DFG AR      Q   T     
Sbjct: 117 SAVSHMHD---VGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKT--PCF 171

Query: 532 TVGYLAPEVFSSGRASTQTDVFGFGIL--ILEVLSGRRP-IEEGKPNLVEMVWELMVQGK 588
           T+ Y APE+ +        D++  G++   +  LSG+ P     +        E+M    
Sbjct: 172 TLHYAAPELLNQNGYDESCDLWSLGVILYTM--LSGQVPFQSHDRSLTCTSAVEIM---- 225

Query: 589 LLDALDARLRAKGGFDEDEVERV------LHLGLLCAYPDPRARPTMRQVVK 634
                    +    F+ +  + V      L  GLL    DP  R  M  +  
Sbjct: 226 -----KKIKKGDFSFEGEAWKNVSQEAKDLIQGLLT--VDPNKRLKMSGLRY 270

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A Length = 321

 Score = 93.9 bits (234), Expect = 4e-21
 Identities = 58/210 (27%), Positives = 93/210 (44%), Gaps = 23/210 (10%)

Query: 371 VIGVGGNGKVYKGVLEGGGAEIAVKRIS------HENDGGTRAFLAEISSLGRLKHKSLV 424
            +G G    V K   +  G E A K I                   E+S L ++ H +++
Sbjct: 19  ELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVI 78

Query: 425 GLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEG 484
            L    +  +  ++L+ + +  G L  ++ Q   S  LS EE    +K +  GV YLH  
Sbjct: 79  TLHDVYE-NRTDVVLILELVSGGELFDFLAQ-KES--LSEEEATSFIKQILDGVNYLHT- 133

Query: 485 WEKKVLHRDIKSSNVLL-DKEMNG---RLGDFGLARMHGHGQVASTTRVVGTVGYLAPEV 540
             KK+ H D+K  N++L DK +     +L DFGLA     G       + GT  ++APE+
Sbjct: 134 --KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKN--IFGTPEFVAPEI 189

Query: 541 FSSGRASTQTDVFGFGIL--ILEVLSGRRP 568
            +      + D++  G++  IL  LSG  P
Sbjct: 190 VNYEPLGLEADMWSIGVITYIL--LSGASP 217

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B Length = 362

 Score = 94.7 bits (236), Expect = 4e-21
 Identities = 65/276 (23%), Positives = 104/276 (37%), Gaps = 43/276 (15%)

Query: 371 VIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGG--TRAFLAEISSLGRLKHKSLVGLRG 428
            +G G    V + V +  G E A K I+ +       +    E     +L+H ++V L  
Sbjct: 36  ELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHD 95

Query: 429 WCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKK 488
             + E+    LV+D +  G L + I         S  +    ++ +   + Y H      
Sbjct: 96  SIQ-EESFHYLVFDLVTGGELFEDIVA---REFYSEADASHCIQQILESIAYCHS---NG 148

Query: 489 VLHRDIKSSNVLLDKEMNG---RLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGR 545
           ++HR++K  N+LL  +  G   +L DFGLA      +        GT GYL+PEV     
Sbjct: 149 IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHG--FAGTPGYLSPEVLKKDP 206

Query: 546 ASTQTDVFGFG-IL-ILEVLSGRRP-IEEGKPNLVEMVWELMVQGKLLDALDARLRAKGG 602
            S   D++  G IL IL  L G  P  +E +  L   +                      
Sbjct: 207 YSKPVDIWACGVILYIL--LVGYPPFWDEDQHRLYAQI----------------KAGAYD 248

Query: 603 FDEDEVERV------LHLGLLCAYPDPRARPTMRQV 632
           +   E + V      L   +L    +P+ R T  Q 
Sbjct: 249 YPSPEWDTVTPEAKSLIDSMLT--VNPKKRITADQA 282

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7 Length = 321

 Score = 93.8 bits (234), Expect = 4e-21
 Identities = 44/204 (21%), Positives = 80/204 (39%), Gaps = 19/204 (9%)

Query: 371 VIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWC 430
            +G G  G V++ V          K +  +          EIS L   +H++++ L    
Sbjct: 12  DLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTD-QVLVKKEISILNIARHRNILHLHESF 70

Query: 431 KREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEER--IRVLKDVAAGVLYLHEGWEKK 488
           +     L+++++++    + + I      +     ER  +  +  V   + +LH      
Sbjct: 71  E-SMEELVMIFEFISGLDIFERINTSAFELN----EREIVSYVHQVCEALQFLHS---HN 122

Query: 489 VLHRDIKSSNVLLDKEMNGRL--GDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRA 546
           + H DI+  N++     +  +   +FG AR    G       +     Y APEV      
Sbjct: 123 IGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNFRL--LFTAPEYYAPEVHQHDVV 180

Query: 547 STQTDVFGFGIL--ILEVLSGRRP 568
           ST TD++  G L  +L  LSG  P
Sbjct: 181 STATDMWSLGTLVYVL--LSGINP 202

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ... Length = 284

 Score = 93.0 bits (232), Expect = 5e-21
 Identities = 54/213 (25%), Positives = 94/213 (44%), Gaps = 17/213 (7%)

Query: 371 VIGVGGNGKVYKGVLEGGGAEIAVKRISHE---NDGGTRAFLAEISSLGRLKHKSLVGLR 427
            +G G  G VY    +     +A+K +       +G       EI     L+H +++ + 
Sbjct: 21  PLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMY 80

Query: 428 GWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRV-LKDVAAGVLYLHEGWE 486
            +    K  + L+ ++   G L K + Q  G      E+R    ++++A  + Y HE   
Sbjct: 81  NYFHDRK-RIYLMLEFAPRGELYKEL-QKHGRF---DEQRSATFMEELADALHYCHE--- 132

Query: 487 KKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRA 546
           +KV+HRDIK  N+L+  +   ++ DFG + +H       T    GT+ YL PE+      
Sbjct: 133 RKVIHRDIKPENLLMGYKGELKIADFGWS-VHAPSLRRRTM--CGTLDYLPPEMIEGKTH 189

Query: 547 STQTDVFGFGILILEVLSGRRPIEEGKPNLVEM 579
             + D++  G+L  E L G  P +   P+  E 
Sbjct: 190 DEKVDLWCAGVLCYEFLVGMPPFDS--PSHTET 220

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C Length = 400

 Score = 95.2 bits (237), Expect = 5e-21
 Identities = 59/284 (20%), Positives = 99/284 (34%), Gaps = 47/284 (16%)

Query: 369 ENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRL-KHKSLVGLR 427
             V+G+G NGKV +   +    + A+K +             E+    R  +   +V + 
Sbjct: 67  SQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARR-----EVELHWRASQCPHIVRIV 121

Query: 428 GWC---KREKGSLMLVYDYMENGSL-DKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHE 483
                    +  L++V + ++ G L  +   +  G    +  E   ++K +   + YLH 
Sbjct: 122 DVYENLYAGRKCLLIVMECLDGGELFSRIQDR--GDQAFTEREASEIMKSIGEAIQYLH- 178

Query: 484 GWEKKVLHRDIKSSNVLL---DKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEV 540
                + HRD+K  N+L          +L DFG A+        +T     T  Y+APEV
Sbjct: 179 --SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTT--PCYTPYYVAPEV 234

Query: 541 FSSGRASTQTDVFGFG-IL-ILEVLSGRRP--IEEGKPNLVEMVWELMVQGKLLDALDAR 596
               +     D++  G I+ IL  L G  P     G      M                 
Sbjct: 235 LGPEKYDKSCDMWSLGVIMYIL--LCGYPPFYSNHGLAISPGM-------------KTRI 279

Query: 597 LRAKGGFDEDEVERV------LHLGLLCAYPDPRARPTMRQVVK 634
              +  F   E   V      L   LL    +P  R T+ + + 
Sbjct: 280 RMGQYEFPNPEWSEVSEEVKMLIRNLLK--TEPTQRMTITEFMN 321

>3pvu_A Beta-adrenergic receptor kinase 1; transferase, serine/threonine-protein kinase, ATP-binding, I membrane; HET: QRW; 2.48A {Bos taurus} PDB: 3psc_A* 3pvw_A* 1omw_A 1ym7_A 2bcj_A* 3cik_A 3krw_A* 3krx_A* 1bak_A Length = 695

 Score = 96.5 bits (240), Expect = 8e-21
 Identities = 58/232 (25%), Positives = 97/232 (41%), Gaps = 19/232 (8%)

Query: 366 FSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHE---NDGGTRAFLAE---ISSLGRLK 419
           FS   +IG GG G+VY       G   A+K +  +      G    L E   +S +    
Sbjct: 191 FSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGD 250

Query: 420 HKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRV-LKDVAAGV 478
              +V +  +       L  + D M  G L  +     G      E  +R    ++  G+
Sbjct: 251 CPFIVCMS-YAFHTPDKLSFILDLMNGGDL-HYHLSQHGVFS---EADMRFYAAEIILGL 305

Query: 479 LYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAP 538
            ++H    + V++RD+K +N+LLD+  + R+ D GLA      +       VGT GY+AP
Sbjct: 306 EHMHN---RFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKK---PHASVGTHGYMAP 359

Query: 539 EVFSSGRASTQT-DVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKL 589
           EV   G A   + D F  G ++ ++L G  P  + K      +  + +   +
Sbjct: 360 EVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAV 411

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ... Length = 283

 Score = 91.9 bits (229), Expect = 9e-21
 Identities = 56/210 (26%), Positives = 96/210 (45%), Gaps = 23/210 (10%)

Query: 371 VIGVGGNGKVYKGVLEGGGAEIAVKRI------SHENDGGTRAFLAEISSLGRLKHKSLV 424
            +G G    V K   +G G E A K I      S            E++ L  ++H +++
Sbjct: 12  ELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNII 71

Query: 425 GLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEG 484
            L    +  K  ++L+ + +  G L  ++ +   S  L+ +E  + LK +  GV YLH  
Sbjct: 72  TLHDIFE-NKTDVVLILELVSGGELFDFLAE-KES--LTEDEATQFLKQILDGVHYLHS- 126

Query: 485 WEKKVLHRDIKSSNVLL-DKEMNG---RLGDFGLARMHGHGQVASTTRVVGTVGYLAPEV 540
             K++ H D+K  N++L DK +     +L DFG+A     G       + GT  ++APE+
Sbjct: 127 --KRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKN--IFGTPEFVAPEI 182

Query: 541 FSSGRASTQTDVFGFGIL--ILEVLSGRRP 568
            +      + D++  G++  IL  LSG  P
Sbjct: 183 VNYEPLGLEADMWSIGVITYIL--LSGASP 210

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A* Length = 361

 Score = 93.6 bits (233), Expect = 1e-20
 Identities = 58/210 (27%), Positives = 93/210 (44%), Gaps = 23/210 (10%)

Query: 371 VIGVGGNGKVYKGVLEGGGAEIAVKRIS------HENDGGTRAFLAEISSLGRLKHKSLV 424
            +G G    V K   +  G E A K I                   E+S L ++ H +++
Sbjct: 19  ELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNII 78

Query: 425 GLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEG 484
            L    +  +  ++L+ + +  G L  ++ Q   S  LS EE    +K +  GV YLH  
Sbjct: 79  TLHDVYE-NRTDVVLILELVSGGELFDFLAQ-KES--LSEEEATSFIKQILDGVNYLHT- 133

Query: 485 WEKKVLHRDIKSSNVLL-DKEMNG---RLGDFGLARMHGHGQVASTTRVVGTVGYLAPEV 540
             KK+ H D+K  N++L DK +     +L DFGLA     G       + GT  ++APE+
Sbjct: 134 --KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKN--IFGTPEFVAPEI 189

Query: 541 FSSGRASTQTDVFGFGIL--ILEVLSGRRP 568
            +      + D++  G++  IL  LSG  P
Sbjct: 190 VNYEPLGLEADMWSIGVITYIL--LSGASP 217

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A Length = 342

 Score = 92.7 bits (231), Expect = 1e-20
 Identities = 66/291 (22%), Positives = 104/291 (35%), Gaps = 67/291 (23%)

Query: 370 NVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRL-KHKSLVGLRG 428
             IGVG      + + +    E AVK I       T     EI  L R  +H +++ L+ 
Sbjct: 28  EDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKRDPTE----EIEILLRYGQHPNIITLKD 83

Query: 429 WCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERI------------RVLKDVAA 476
               +   + +V + M+ G L                ++I             VL  +  
Sbjct: 84  VYD-DGKYVYVVTELMKGGEL----L-----------DKILRQKFFSEREASAVLFTITK 127

Query: 477 GVLYLHEGWEKKVLHRDIKSSNVLL-DKEMNG---RLGDFGLAR-MHGHGQVASTTRVVG 531
            V YLH    + V+HRD+K SN+L  D+  N    R+ DFG A+ +     +  T     
Sbjct: 128 TVEYLH---AQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLMT--PCY 182

Query: 532 TVGYLAPEVFSSGRASTQTDVFGFGIL--ILEVLSGRRPIEEGKPNLVEMVWELMVQGKL 589
           T  ++APEV          D++  G+L   +  L+G  P   G  +  E +   +  GK 
Sbjct: 183 TANFVAPEVLERQGYDAACDIWSLGVLLYTM--LTGYTPFANGPDDTPEEILARIGSGKF 240

Query: 590 LDALDARLRAKGGFDEDEVERV------LHLGLLCAYPDPRARPTMRQVVK 634
                                V      L   +L    DP  R T   V++
Sbjct: 241 ------------SLSGGYWNSVSDTAKDLVSKMLH--VDPHQRLTAALVLR 277

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis} Length = 394

 Score = 93.2 bits (232), Expect = 2e-20
 Identities = 52/229 (22%), Positives = 99/229 (43%), Gaps = 37/229 (16%)

Query: 350 WPHRITYQEIEAATKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFL 409
               I Y   +          VIG G  G V++  L     E+A+K++  +     R   
Sbjct: 36  EQREIAYTNCK----------VIGNGSFGVVFQAKLVESD-EVAIKKVLQDKRFKNR--- 81

Query: 410 AEISSLGRLKHKSLVGLR-----GWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSC 464
            E+  +  +KH ++V L+        K+++  L LV +Y+   ++ +             
Sbjct: 82  -ELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLNLVLEYVPE-TVYRASRHYAKLKQTMP 139

Query: 465 EERIRV-----LKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNG-RLGDFGLARMH 518
              I++     L+     + Y+H      + HRDIK  N+LLD      +L DFG A++ 
Sbjct: 140 MLLIKLYMYQLLR----SLAYIH---SIGICHRDIKPQNLLLDPPSGVLKLIDFGSAKIL 192

Query: 519 GHGQVASTTRVVGTVGYLAPEV-FSSGRASTQTDVFGFGILILEVLSGR 566
             G+  + + +  +  Y APE+ F +   +T  D++  G ++ E++ G+
Sbjct: 193 IAGE-PNVSYIC-SRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQ 239

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens} Length = 444

 Score = 93.5 bits (233), Expect = 2e-20
 Identities = 69/279 (24%), Positives = 104/279 (37%), Gaps = 44/279 (15%)

Query: 371 VIGVGGNGKVYKGVLEGGGAEIAVKRI--SHENDGGTRAFLAEISSLGRLKHKSLVGLRG 428
            +G G    V + V    G E A   I     +    +    E      LKH ++V L  
Sbjct: 18  ELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHD 77

Query: 429 WCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKK 488
               E+G   L++D +  G L + I         S  +    ++ +   VL+ H+     
Sbjct: 78  SIS-EEGHHYLIFDLVTGGELFEDIVA---REYYSEADASHCIQQILEAVLHCHQ---MG 130

Query: 489 VLHRDIKSSNVLL---DKEMNGRLGDFGLAR-MHGHGQVASTTRVVGTVGYLAPEVFSSG 544
           V+HR++K  N+LL    K    +L DFGLA  + G  Q        GT GYL+PEV    
Sbjct: 131 VVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFG--FAGTPGYLSPEVLRKD 188

Query: 545 RASTQTDVFGFG-IL-ILEVLSGRRP-IEEGKPNLVEMVWELMVQGKLLDALDARLRAKG 601
                 D++  G IL IL  L G  P  +E +  L + +                     
Sbjct: 189 PYGKPVDLWACGVILYIL--LVGYPPFWDEDQHRLYQQI----------------KAGAY 230

Query: 602 GFDEDEVERV------LHLGLLCAYPDPRARPTMRQVVK 634
            F   E + V      L   +L    +P  R T  + +K
Sbjct: 231 DFPSPEWDTVTPEAKDLINKMLT--INPSKRITAAEALK 267

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ... Length = 420

 Score = 93.2 bits (232), Expect = 2e-20
 Identities = 54/216 (25%), Positives = 101/216 (46%), Gaps = 27/216 (12%)

Query: 366 FSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVG 425
           +++  VIG G  G VY+  L   G  +A+K++  +     R    E+  + +L H ++V 
Sbjct: 56  YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR----ELQIMRKLDHCNIVR 111

Query: 426 LR-----GWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIR-----VLKDVA 475
           LR        K+++  L LV DY+   ++ +       +        ++     + +   
Sbjct: 112 LRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFR--- 167

Query: 476 AGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNG-RLGDFGLARMHGHGQVASTTRVVGTVG 534
             + Y+H      + HRDIK  N+LLD +    +L DFG A+    G+  + + +  +  
Sbjct: 168 -SLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE-PNVSYIC-SRY 221

Query: 535 YLAPEV-FSSGRASTQTDVFGFGILILEVLSGRRPI 569
           Y APE+ F +   ++  DV+  G ++ E+L G +PI
Sbjct: 222 YRAPELIFGATDYTSSIDVWSAGCVLAELLLG-QPI 256

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens} Length = 326

 Score = 91.2 bits (227), Expect = 4e-20
 Identities = 53/212 (25%), Positives = 93/212 (43%), Gaps = 23/212 (10%)

Query: 369 ENVIGVGGNGKVYKGVLEGGGAEIAVKRI------SHENDGGTRAFLAEISSLGRLKHKS 422
              +G G    V K   +  G + A K I      S            E+S L  ++H +
Sbjct: 16  GEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPN 75

Query: 423 LVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLH 482
           ++ L    +  K  ++L+ + +  G L  ++ + +    L+ EE    LK +  GV YLH
Sbjct: 76  VITLHEVYE-NKTDVILILELVAGGELFDFLAEKE---SLTEEEATEFLKQILNGVYYLH 131

Query: 483 EGWEKKVLHRDIKSSNVLL-DKEMNG---RLGDFGLARMHGHGQVASTTRVVGTVGYLAP 538
                ++ H D+K  N++L D+ +     ++ DFGLA     G       + GT  ++AP
Sbjct: 132 S---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN--IFGTPEFVAP 186

Query: 539 EVFSSGRASTQTDVFGFGIL--ILEVLSGRRP 568
           E+ +      + D++  G++  IL  LSG  P
Sbjct: 187 EIVNYEPLGLEADMWSIGVITYIL--LSGASP 216

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A* Length = 327

 Score = 90.4 bits (225), Expect = 6e-20
 Identities = 62/278 (22%), Positives = 107/278 (38%), Gaps = 44/278 (15%)

Query: 371 VIGVGGNGKVYKGVLEGGGAEIAVKRI--SHENDGGTRAFLAEISSLGRLKH-KSLVGLR 427
            +G G    V + + +  G E A K +             L EI+ L   K    ++ L 
Sbjct: 36  ELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLH 95

Query: 428 GWCKREKGSLMLVYDYMENGSL-DKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWE 486
              +     ++L+ +Y   G +    + +      +S  + IR++K +  GV YLH+   
Sbjct: 96  EVYE-NTSEIILILEYAAGGEIFSLCLPELAEM--VSENDVIRLIKQILEGVYYLHQ--- 149

Query: 487 KKVLHRDIKSSNVLL-DKEMNGRL--GDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSS 543
             ++H D+K  N+LL      G +   DFG++R  GH        ++GT  YLAPE+ + 
Sbjct: 150 NNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHACELRE--IMGTPEYLAPEILNY 207

Query: 544 GRASTQTDVFGFGIL--ILEVLSGRRP-IEEGKPNLVEMVWELMVQGKLLDALDARLRAK 600
              +T TD++  GI+  +L  L+   P + E        +                 +  
Sbjct: 208 DPITTATDMWNIGIIAYML--LTHTSPFVGEDNQETYLNI----------------SQVN 249

Query: 601 GGFDEDEVERV------LHLGLLCAYPDPRARPTMRQV 632
             + E+    V          LL    +P  RPT    
Sbjct: 250 VDYSEETFSSVSQLATDFIQSLLV--KNPEKRPTAEIC 285

>1uu3_A HPDK1, 3-phosphoinositide dependent protein kinase-1; PKB, inhibitor, LY333531, diabetes, cancer, transferase, serine/threonine-protein kinase; HET: SEP LY4; 1.7A {Homo sapiens} SCOP: d.144.1.7 PDB: 1okz_A* 1oky_A* 1uu7_A* 1uu8_A* 2biy_A* 3rwp_A* 2xch_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* ... Length = 310

 Score = 87.3 bits (217), Expect = 5e-19
 Identities = 54/205 (26%), Positives = 93/205 (45%), Gaps = 17/205 (8%)

Query: 371 VIGVGGNGKVYKGVLEGGGAEIAVK-----RISHENDGGTRAFLAEISSLGRLKHKSLVG 425
           ++G G    V          E A+K      I  EN         E   + RL H   V 
Sbjct: 37  ILGEGSFSTVVLARELATSREYAIKILEKRHIIKENK--VPYVTRERDVMSRLDHPFFVK 94

Query: 426 LRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRV-LKDVAAGVLYLHEG 484
           L    + ++  L     Y +NG L K+I +  GS     E   R    ++ + + YLH  
Sbjct: 95  LYFTFQDDE-KLYFGLSYAKNGELLKYI-RKIGSFD---ETCTRFYTAEIVSALEYLHG- 148

Query: 485 WEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTR-VVGTVGYLAPEVFSS 543
             K ++HRD+K  N+LL+++M+ ++ DFG A++       +     VGT  Y++PE+ + 
Sbjct: 149 --KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTE 206

Query: 544 GRASTQTDVFGFGILILEVLSGRRP 568
             A   +D++  G +I ++++G  P
Sbjct: 207 KSACKSSDLWALGCIIYQLVAGLPP 231

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens} Length = 298

 Score = 86.9 bits (216), Expect = 7e-19
 Identities = 58/243 (23%), Positives = 99/243 (40%), Gaps = 50/243 (20%)

Query: 372 IGVGGNGKVYKGVLEGGGAEIAVKRIS---------HENDGGTRAFLA------------ 410
           IG G  G V     E      A+K +S                R                
Sbjct: 21  IGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPI 80

Query: 411 -----EISSLGRLKHKSLVGLRG-WCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSC 464
                EI+ L +L H ++V L        +  L +V++ +  G +     +      LS 
Sbjct: 81  EQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPV----MEVPTLKPLSE 136

Query: 465 EERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMH-GHGQV 523
           ++     +D+  G+ YLH    +K++HRDIK SN+L+ ++ + ++ DFG++    G   +
Sbjct: 137 DQARFYFQDLIKGIEYLHY---QKIIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSDAL 193

Query: 524 ASTTRVVGTVGYLAPEVFS------SGRASTQTDVFGFGILILEVL-SGRRPIEEGKPNL 576
            S T  VGT  ++APE  S      SG+A    DV+  G+  L     G+ P  +    +
Sbjct: 194 LSNT--VGTPAFMAPESLSETRKIFSGKAL---DVWAMGV-TLYCFVFGQCPFMD--ERI 245

Query: 577 VEM 579
           + +
Sbjct: 246 MCL 248

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens} Length = 384

 Score = 88.1 bits (219), Expect = 7e-19
 Identities = 55/226 (24%), Positives = 99/226 (43%), Gaps = 17/226 (7%)

Query: 371 VIGVGGNGKVYKGVLEGGGAEIAVKRISHEN---DGGTRAFLAEISSLGRLKHKSLVGLR 427
            IG G  GKV            A+K ++ +        R    E+  +  L+H  LV L 
Sbjct: 22  AIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLW 81

Query: 428 GWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRV-LKDVAAGVLYLHEGWE 486
               +++  + +V D +  G L ++  Q +       EE +++ + ++   + YL     
Sbjct: 82  Y-SFQDEEDMFMVVDLLLGGDL-RYHLQQNVHFK---EETVKLFICELVMALDYLQN--- 133

Query: 487 KKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRA 546
           ++++HRD+K  N+LLD+  +  + DF +A M       +T  + GT  Y+APE+FSS + 
Sbjct: 134 QRIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRETQITT--MAGTKPYMAPEMFSSRKG 191

Query: 547 ---STQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKL 589
              S   D +  G+   E+L GRRP         + +        +
Sbjct: 192 AGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIVHTFETTVV 237

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens} Length = 312

 Score = 86.6 bits (215), Expect = 1e-18
 Identities = 59/287 (20%), Positives = 109/287 (37%), Gaps = 64/287 (22%)

Query: 371 VIGVGGNGKVYKGVLEGGGAEIAVKRISHEN-------DGGTRAFLAEISSLGRL----K 419
           ++G GG G V+ G       ++A+K I                  L E++ L ++     
Sbjct: 38  LLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPL-EVALLWKVGAGGG 96

Query: 420 HKSLVGLRGWCKREKGSLML---------VYDY-MENGSLDKWIFQCDGSMMLSCEERIR 469
           H  ++ L  W + ++G +++         ++DY  E G L +                  
Sbjct: 97  HPGVIRLLDWFETQEGFMLVLERPLPAQDLFDYITEKGPLGE-------------GPSRC 143

Query: 470 VLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNG-RLGDFGLARMHGHGQVASTTR 528
               V A + + H    + V+HRDIK  N+L+D      +L DFG   +  H +  +   
Sbjct: 144 FFGQVVAAIQHCHS---RGVVHRDIKDENILIDLRRGCAKLIDFGSGALL-HDEPYTDF- 198

Query: 529 VVGTVGYLAPEVFSSGR-ASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQG 587
             GT  Y  PE  S  +  +    V+  GIL+ +++ G  P E  +              
Sbjct: 199 -DGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQ-------------- 243

Query: 588 KLLDALDARLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVK 634
              + L+A L         +   ++    L   P P +RP++ +++ 
Sbjct: 244 ---EILEAELHFPAHVSP-DCCALIR-RCLA--PKPSSRPSLEEILL 283

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ... Length = 320

 Score = 86.2 bits (214), Expect = 2e-18
 Identities = 53/219 (24%), Positives = 86/219 (39%), Gaps = 41/219 (18%)

Query: 371 VIGVGGNGKVYKGVLEGGGAEIAVKRIS-------HENDGGTRAFLAEISSLGRLKHKS- 422
           ++G GG G VY G+       +A+K +         E   GTR  + E+  L ++     
Sbjct: 50  LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM-EVVLLKKVSSGFS 108

Query: 423 -LVGLRGWCKREKGSLML---------VYDYM-ENGSLDKWIFQCDGSMMLSCEERIRVL 471
            ++ L  W +R    +++         ++D++ E G+L +             E      
Sbjct: 109 GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQE-------------ELARSFF 155

Query: 472 KDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKE-MNGRLGDFGLARMHGHGQVASTTRVV 530
             V   V + H      VLHRDIK  N+L+D      +L DFG   +     V +     
Sbjct: 156 WQVLEAVRHCHN---CGVLHRDIKDENILIDLNRGELKLIDFGSGALL-KDTVYTDF--D 209

Query: 531 GTVGYLAPEVFSSGR-ASTQTDVFGFGILILEVLSGRRP 568
           GT  Y  PE     R       V+  GIL+ +++ G  P
Sbjct: 210 GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 248

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A Length = 328

 Score = 85.0 bits (211), Expect = 4e-18
 Identities = 67/272 (24%), Positives = 114/272 (41%), Gaps = 39/272 (14%)

Query: 372 IGVGGNGKVYKGVLEGGGAEIAVKRISHE--NDGGTRAFLAEISSLGRLKHKSLVGLRGW 429
           IG G   KV        G E+A+K I     N    +    E+  +  L H ++V L   
Sbjct: 23  IGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLF-- 80

Query: 430 CKRE----KGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGW 485
              E    + +L L+ +Y   G +  ++        +  +E     + + + V Y H+  
Sbjct: 81  ---EVIETEKTLYLIMEYASGGEVFDYLVAHGR---MKEKEARSKFRQIVSAVQYCHQ-- 132

Query: 486 EKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGR 545
            K+++HRD+K+ N+LLD +MN ++ DFG +     G         G   Y APE+F  G+
Sbjct: 133 -KRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDAF--CGAPPYAAPELF-QGK 188

Query: 546 --ASTQTDVFGFGILILEVLSGRRPIE-EGKPNLVEMVWELMVQGKLLDALDARLRAKGG 602
                + DV+  G+++  ++SG  P + +    L E V            L  + R    
Sbjct: 189 KYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERV------------LRGKYRIPFY 236

Query: 603 FDEDEVERVLHLGLLCAYPDPRARPTMRQVVK 634
              D  E +L    L    +P  R T+ Q++K
Sbjct: 237 MSTD-CENLLK-RFLV--LNPIKRGTLEQIMK 264

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens} Length = 335

 Score = 84.8 bits (210), Expect = 6e-18
 Identities = 57/293 (19%), Positives = 103/293 (35%), Gaps = 80/293 (27%)

Query: 372 IGVGGNGKVYKGVLEGGGAEIAVKRIS---------HENDGGTRAFLAEISSLGRLKHKS 422
           +G G  G V+  V +    E+ VK I           E+    +  L EI+ L R++H +
Sbjct: 32  LGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTL-EIAILSRVEHAN 90

Query: 423 LVGLRGWCKREKGSLMLVYDYMENGSLDKWIF-----QCDGSMM---------LSCEERI 468
           ++ +               D  EN     +          G  +         L      
Sbjct: 91  IIKV--------------LDIFEN---QGFFQLVMEKHGSGLDLFAFIDRHPRLDEPLAS 133

Query: 469 RVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTR 528
            + + + + V YL     K ++HRDIK  N+++ ++   +L DFG A     G++  T  
Sbjct: 134 YIFRQLVSAVGYLRL---KDIIHRDIKDENIVIAEDFTIKLIDFGSAAYLERGKLFYTF- 189

Query: 529 VVGTVGYLAPEVFSSGR--ASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQ 586
             GT+ Y APEV   G      + +++  G+ +  ++    P                  
Sbjct: 190 -CGTIEYCAPEVL-MGNPYRGPELEMWSLGVTLYTLVFEENPFC---------------- 231

Query: 587 GKLLDALDARLRAKGGFDE-----DEVERVLHLGLLCAYPDPRARPTMRQVVK 634
                  +     +           E+  ++  GLL   P P  R T+ ++V 
Sbjct: 232 -------ELEETVEAAIHPPYLVSKELMSLVS-GLLQ--PVPERRTTLEKLVT 274

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens} Length = 412

 Score = 85.1 bits (211), Expect = 9e-18
 Identities = 57/257 (22%), Positives = 98/257 (38%), Gaps = 27/257 (10%)

Query: 324 CSLFLIKRKQRRAREREEMEDWELEYWPHRITYQEIEAATKGFSEENVIGVGGNGKVYKG 383
                + + +  A   +  E   +     R+   +       F    VIG G   +V   
Sbjct: 28  LGASELAQDKYVADFLQWAEPIVVRLKEVRLQRDD-------FEILKVIGRGAFSEVAVV 80

Query: 384 VLEGGGAEIAVKRISHEN---DGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLV 440
            ++  G   A+K ++  +    G    F  E   L     + +  L  +  +++  L LV
Sbjct: 81  KMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLH-FAFQDENYLYLV 139

Query: 441 YDYMENGSLDKWIFQCDGSMMLSCEERIRV-LKDVAAGVLYLHEGWEKKVLHRDIKSSNV 499
            +Y   G L   + +    +     E  R  L ++   +  +H       +HRDIK  N+
Sbjct: 140 MEYYVGGDLLTLLSKFGERIP---AEMARFYLAEIVMAIDSVHR---LGYVHRDIKPDNI 193

Query: 500 LLDKEMNGRLGDFGLA-RMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFG---- 554
           LLD+  + RL DFG   ++   G V S    VGT  YL+PE+  +      T  +G    
Sbjct: 194 LLDRCGHIRLADFGSCLKLRADGTVRSLV-AVGTPDYLSPEILQAVGGGPGTGSYGPECD 252

Query: 555 ---FGILILEVLSGRRP 568
               G+   E+  G+ P
Sbjct: 253 WWALGVFAYEMFYGQTP 269

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens} Length = 305

 Score = 81.5 bits (202), Expect = 4e-17
 Identities = 46/218 (21%), Positives = 88/218 (40%), Gaps = 17/218 (7%)

Query: 371 VIGVGGNGKVYKGVLEGGGAEIAVK-----RISHENDGGTRAFLAEISSLGRLKHKSLVG 425
           ++G G  GKV + +        AVK     ++    +G       EI  L RL+HK+++ 
Sbjct: 12  LLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKK-EIQLLRRLRHKNVIQ 70

Query: 426 LRG-WCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEG 484
           L       EK  + +V +Y   G  +  +            +       +  G+ YLH  
Sbjct: 71  LVDVLYNEEKQKMYMVMEYCVCGMQE--MLDSVPEKRFPVCQAHGYFCQLIDGLEYLHS- 127

Query: 485 WEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRVV-GTVGYLAPEVFSS 543
             + ++H+DIK  N+LL      ++   G+A          T R   G+  +  PE+ + 
Sbjct: 128 --QGIVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADDTCRTSQGSPAFQPPEIANG 185

Query: 544 GR--ASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEM 579
               +  + D++  G+ +  + +G  P E    N+ ++
Sbjct: 186 LDTFSGFKVDIWSAGVTLYNITTGLYPFEG--DNIYKL 221

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major} Length = 360

 Score = 82.7 bits (205), Expect = 4e-17
 Identities = 55/225 (24%), Positives = 94/225 (41%), Gaps = 25/225 (11%)

Query: 363 TKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKS 422
              F  E + G G  G V  G  +  G  +A+K++  +     R  L  +  L  L H +
Sbjct: 22  MDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFRNRE-LQIMQDLAVLHHPN 80

Query: 423 LVGLR------GWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRV-----L 471
           +V L+      G   R    L +V +Y+ + +L +         +      I+V     +
Sbjct: 81  IVQLQSYFYTLGERDRRDIYLNVVMEYVPD-TLHRCCRNYYRRQVAPPPILIKVFLFQLI 139

Query: 472 KDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRL--GDFGLARMHGHGQVASTTRV 529
           +     +  LH      V HRDIK  NVL+++  +G L   DFG A+     +  +   +
Sbjct: 140 R----SIGCLHLP-SVNVCHRDIKPHNVLVNEA-DGTLKLCDFGSAKKLSPSE-PNVAYI 192

Query: 530 VGTVGYLAPEV-FSSGRASTQTDVFGFGILILEVLSGRRPIEEGK 573
             +  Y APE+ F +   +T  D++  G +  E++ G  PI  G 
Sbjct: 193 C-SRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLG-EPIFRGD 235

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A* Length = 437

 Score = 82.9 bits (205), Expect = 6e-17
 Identities = 52/207 (25%), Positives = 85/207 (41%), Gaps = 16/207 (7%)

Query: 371 VIGVGGNGKVYKGVLEGGGAEIAVKRISHEN---DGGTRAFLAEISSLGRLKHKSLVGLR 427
           VIG G  G+V    L+      A+K ++         T  F  E   L     K +  L 
Sbjct: 81  VIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLH 140

Query: 428 GWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRV-LKDVAAGVLYLHEGWE 486
            +  ++  +L LV DY   G L   + + +  +    EE  R  L ++   +  +H+   
Sbjct: 141 -YAFQDDNNLYLVMDYYVGGDLLTLLSKFEDRLP---EEMARFYLAEMVIAIDSVHQ--- 193

Query: 487 KKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRA 546
              +HRDIK  N+L+D   + RL DFG            ++  VGT  Y++PE+  +   
Sbjct: 194 LHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQAMEG 253

Query: 547 STQT-----DVFGFGILILEVLSGRRP 568
                    D +  G+ + E+L G  P
Sbjct: 254 GKGRYGPECDWWSLGVCMYEMLYGETP 280

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A* Length = 276

 Score = 78.8 bits (195), Expect = 2e-16
 Identities = 63/221 (28%), Positives = 104/221 (47%), Gaps = 33/221 (14%)

Query: 372 IGVGGNGKVYKGVLEGGGAEIAVK-----RISHENDGG--TRAFLAEISSLGRLKHKSLV 424
           +GVG  GKV  G  +  G ++AVK     +I   +  G   R    EI +L   +H  ++
Sbjct: 19  LGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKR----EIQNLKLFRHPHII 74

Query: 425 GLRGWCKRE----KGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLY 480
            L      +         +V +Y+  G L  +I +      +   E  R+ + + + V Y
Sbjct: 75  KLY-----QVISTPTDFFMVMEYVSGGELFDYICKHGR---VEEMEARRLFQQILSAVDY 126

Query: 481 LHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEV 540
            H      V+HRD+K  NVLLD  MN ++ DFGL+ M   G+   T+   G+  Y APEV
Sbjct: 127 CHR---HMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTS--CGSPNYAAPEV 181

Query: 541 FSSGR--ASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEM 579
             SGR  A  + D++  G+++  +L G  P ++   ++  +
Sbjct: 182 I-SGRLYAGPEVDIWSCGVILYALLCGTLPFDD--EHVPTL 219

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3mb7_A* 3mb6_A* 3owj_A* 3owk_A* ... Length = 330

 Score = 79.2 bits (196), Expect = 4e-16
 Identities = 51/238 (21%), Positives = 95/238 (39%), Gaps = 29/238 (12%)

Query: 348 EYWPHRITYQEIEAATKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRA 407
           EYW +     E       +     +G G   +V++ +      ++ VK +        + 
Sbjct: 21  EYWDYESHVVEWGNQDD-YQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKK--KKI 77

Query: 408 FLAEISSLGRLK-HKSLVGLRGWCK-REKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCE 465
              EI  L  L+   +++ L    K     +  LV++++ N    + ++Q      L+ +
Sbjct: 78  -KREIKILENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQ-LYQ-----TLT-D 129

Query: 466 ERIR-----VLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNG-RLGDFGLARMHG 519
             IR     +LK     + Y H      ++HRD+K  NV++D E    RL D+GLA  + 
Sbjct: 130 YDIRFYMYEILK----ALDYCHS---MGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYH 182

Query: 520 HGQVASTTRVVGTVGYLAPEV-FSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNL 576
            GQ     RV  +  +  PE+           D++  G ++  ++  + P   G  N 
Sbjct: 183 PGQ-EYNVRVA-SRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNY 238

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens} Length = 353

 Score = 79.3 bits (196), Expect = 5e-16
 Identities = 59/231 (25%), Positives = 101/231 (43%), Gaps = 46/231 (19%)

Query: 363 TKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAF---------LAEIS 413
            K +     +G G  G V   + +  G ++A+K++S       R F           E+ 
Sbjct: 23  PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLS-------RPFQSEIFAKRAYRELL 75

Query: 414 SLGRLKHKSLVGLR-----GWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERI 468
            L  ++H++++GL          R      LV  +M+   L K +         S EE+I
Sbjct: 76  LLKHMQHENVIGLLDVFTPASSLRNFYDFYLVMPFMQT-DLQKIMGL-----KFS-EEKI 128

Query: 469 R-----VLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQV 523
           +     +LK    G+ Y+H      V+HRD+K  N+ ++++   ++ DFGLAR       
Sbjct: 129 QYLVYQMLK----GLKYIHSA---GVVHRDLKPGNLAVNEDCELKILDFGLAR----HAD 177

Query: 524 ASTTRVVGTVGYLAPEV-FSSGRASTQTDVFGFGILILEVLSGRRPIEEGK 573
           A  T  V T  Y APEV  S    +   D++  G ++ E+L   + + +GK
Sbjct: 178 AEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEML-TGKTLFKGK 227

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ... Length = 371

 Score = 79.3 bits (196), Expect = 5e-16
 Identities = 53/227 (23%), Positives = 91/227 (40%), Gaps = 43/227 (18%)

Query: 366 FSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAF---------LAEISSLG 416
           +     IG G  G V           +A+K++S       R F           E+  + 
Sbjct: 27  YQNLKPIGSGAQGIVCAAYDAILERNVAIKKLS-------RPFQNQTHAKRAYRELVLMK 79

Query: 417 RLKHKSLVGLR-----GWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIR-- 469
            + HK+++GL           E   + +V + M+  +L + I      M L   ER+   
Sbjct: 80  CVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDA-NLCQVI-----QMELD-HERMSYL 132

Query: 470 ---VLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVAST 526
              +L     G+ +LH      ++HRD+K SN+++  +   ++ DFGLAR  G   +   
Sbjct: 133 LYQMLC----GIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFM--M 183

Query: 527 TRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGK 573
           T  V T  Y APEV          D++  G ++ E++     +  G 
Sbjct: 184 TPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMI-KGGVLFPGT 229

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ... Length = 276

 Score = 76.5 bits (189), Expect = 1e-15
 Identities = 67/276 (24%), Positives = 107/276 (38%), Gaps = 42/276 (15%)

Query: 372 IGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLA-EISSLGRLKHKSLVGLRGWC 430
           +G G  G+V   V       +AVK +  +        +  EI     L H+++V   G  
Sbjct: 15  LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG-H 73

Query: 431 KREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVL 490
           +RE     L  +Y   G L   I    G   +   +  R    + AGV+YLH      + 
Sbjct: 74  RREGNIQYLFLEYCSGGELFDRIEPDIG---MPEPDAQRFFHQLMAGVVYLHG---IGIT 127

Query: 491 HRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVAS---TTRVVGTVGYLAPEVFSSGR-- 545
           HRDIK  N+LLD+  N ++ DFGLA +  +             GT+ Y+APE+    R  
Sbjct: 128 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKM--CGTLPYVAPELL-KRREF 184

Query: 546 ASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRAKGGFDE 605
            +   DV+  GI++  +L+G  P ++   +  E                     +     
Sbjct: 185 HAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEY----------------SDWKEKKTYL 228

Query: 606 -------DEVERVLHLGLLCAYPDPRARPTMRQVVK 634
                       +LH  +L    +P AR T+  + K
Sbjct: 229 NPWKKIDSAPLALLH-KILV--ENPSARITIPDIKK 261

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A* Length = 446

 Score = 78.6 bits (194), Expect = 1e-15
 Identities = 59/205 (28%), Positives = 93/205 (45%), Gaps = 18/205 (8%)

Query: 371 VIGVGGNGKVYKGVLEGGGAEIAVK-----RISHENDGGTRAFLAEISSLGRLKHKSLVG 425
           ++G G  GKV     +  G   A+K      I  +++      L E   L   +H  L  
Sbjct: 155 LLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDE--VAHTLTENRVLQNSRHPFLTA 212

Query: 426 LRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRV-LKDVAAGVLYLHEG 484
           L+ +  +    L  V +Y   G L    F      + S E+R R    ++ + + YLH  
Sbjct: 213 LK-YSFQTHDRLCFVMEYANGGEL---FFHLSRERVFS-EDRARFYGAEIVSALDYLHS- 266

Query: 485 WEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMH-GHGQVASTTRVVGTVGYLAPEVFSS 543
            EK V++RD+K  N++LDK+ + ++ DFGL +     G    T    GT  YLAPEV   
Sbjct: 267 -EKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKT--FCGTPEYLAPEVLED 323

Query: 544 GRASTQTDVFGFGILILEVLSGRRP 568
                  D +G G+++ E++ GR P
Sbjct: 324 NDYGRAVDWWGLGVVMYEMMCGRLP 348

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3o71_A 3r63_A 3c9w_A* 2y9q_A* 3sa0_A* 1wzy_A* 2e14_A* 1tvo_A* 2ojg_A* 2oji_A* ... Length = 364

 Score = 77.7 bits (192), Expect = 2e-15
 Identities = 66/223 (29%), Positives = 104/223 (46%), Gaps = 31/223 (13%)

Query: 366 FSEENVIGVGGNGKVYKGVLEGGGAEIAVKRIS---HENDGGTRAFLAEISSLGRLKHKS 422
           ++  + IG G  G V           +A+K+IS   H+     R  L EI  L R +H++
Sbjct: 29  YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYC-QRT-LREIKILLRFRHEN 86

Query: 423 LVGL----RGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIR-----VLKD 473
           ++G+    R     +   + +V D ME   L K +     +  LS  + I      +L+ 
Sbjct: 87  IIGINDIIRAPTIEQMKDVYIVQDLMET-DLYKLLK----TQHLS-NDHICYFLYQILR- 139

Query: 474 VAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARM--HGHGQVASTTRVVG 531
              G+ Y+H      VLHRD+K SN+LL+   + ++ DFGLAR+    H      T  V 
Sbjct: 140 ---GLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 193

Query: 532 TVGYLAPEV-FSSGRASTQTDVFGFGILILEVLSGRRPIEEGK 573
           T  Y APE+  +S   +   D++  G ++ E+L   RPI  GK
Sbjct: 194 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML-SNRPIFPGK 235

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A* Length = 464

 Score = 78.7 bits (194), Expect = 2e-15
 Identities = 53/230 (23%), Positives = 92/230 (40%), Gaps = 43/230 (18%)

Query: 363 TKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAF---------LAEIS 413
            K +     IG G  G V           +A+K++S       R F           E+ 
Sbjct: 61  LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLS-------RPFQNQTHAKRAYRELV 113

Query: 414 SLGRLKHKSLVGLR-----GWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERI 468
            +  + HK+++ L           E   + LV + M+  +L + I        L   ER+
Sbjct: 114 LMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDA-NLCQVIQM-----ELD-HERM 166

Query: 469 R-----VLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQV 523
                 +L     G+ +LH      ++HRD+K SN+++  +   ++ DFGLAR  G   +
Sbjct: 167 SYLLYQMLC----GIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFM 219

Query: 524 ASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGK 573
              T  V T  Y APEV          D++  G ++ E++   + +  G+
Sbjct: 220 --MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV-RHKILFPGR 266

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens} Length = 320

 Score = 76.9 bits (190), Expect = 2e-15
 Identities = 56/230 (24%), Positives = 97/230 (42%), Gaps = 36/230 (15%)

Query: 366 FSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVG 425
           + +   +G GGNG V+  V       +A+K+I   +    +  L EI  + RL H ++V 
Sbjct: 13  YMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVK 72

Query: 426 LR-------------GWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIR--- 469
           +                   E  S+ +V +YME   L   +        L  EE  R   
Sbjct: 73  VFEILGPSGSQLTDDVGSLTELNSVYIVQEYMET-DLANVL----EQGPLL-EEHARLFM 126

Query: 470 --VLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKE-MNGRLGDFGLARMHGHGQVAST 526
             +L+    G+ Y+H      VLHRD+K +N+ ++ E +  ++GDFGLAR+         
Sbjct: 127 YQLLR----GLKYIHSA---NVLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYSHKG 179

Query: 527 --TRVVGTVGYLAPEV-FSSGRASTQTDVFGFGILILEVLSGRRPIEEGK 573
             +  + T  Y +P +  S    +   D++  G +  E+L   + +  G 
Sbjct: 180 HLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEML-TGKTLFAGA 228

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A Length = 674

 Score = 78.9 bits (194), Expect = 2e-15
 Identities = 54/204 (26%), Positives = 88/204 (43%), Gaps = 16/204 (7%)

Query: 371 VIGVGGNGKVYKGVLEGGGAEIAVKRISHE---NDGGTRAFLAEISSLGR-LKHKSLVGL 426
           V+G G  GKV     +G     AVK +  +    D      + E   L    K   L  L
Sbjct: 348 VLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQL 407

Query: 427 RGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLK-DVAAGVLYLHEGW 485
              C +    L  V +Y+  G L   ++          E        ++A G+ +L    
Sbjct: 408 H-SCFQTMDRLYFVMEYVNGGDL---MYHIQQVGRFK-EPHAVFYAAEIAIGLFFLQS-- 460

Query: 486 EKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMH-GHGQVASTTRVVGTVGYLAPEVFSSG 544
            K +++RD+K  NV+LD E + ++ DFG+ + +   G    T    GT  Y+APE+ +  
Sbjct: 461 -KGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKT--FCGTPDYIAPEIIAYQ 517

Query: 545 RASTQTDVFGFGILILEVLSGRRP 568
                 D + FG+L+ E+L+G+ P
Sbjct: 518 PYGKSVDWWAFGVLLYEMLAGQAP 541

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A* Length = 410

 Score = 77.4 bits (191), Expect = 3e-15
 Identities = 57/258 (22%), Positives = 98/258 (37%), Gaps = 34/258 (13%)

Query: 324 CSLFLIKRKQRRAREREEMEDWELEYWPHRITYQEIEAATKGFSEENVIGVGGNGKVYKG 383
                +++ +         +D   +    R+  ++       +    VIG G  G+V   
Sbjct: 36  LDFPALRKNKNIDNFLSRYKDTINKIRDLRMKAED-------YEVVKVIGRGAFGEVQLV 88

Query: 384 VLEGGGAEIAVKRISHEN---DGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLV 440
             +      A+K +S         +  F  E   +       +V L  +  ++   L +V
Sbjct: 89  RHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLF-YAFQDDRYLYMV 147

Query: 441 YDYMENGSLDKWIFQCDGSMMLSC----EERIRV-LKDVAAGVLYLHEGWEKKVLHRDIK 495
            +YM  G L           ++S     E+  R    +V   +  +H       +HRD+K
Sbjct: 148 MEYMPGGDL----VN-----LMSNYDVPEKWARFYTAEVVLALDAIHS---MGFIHRDVK 195

Query: 496 SSNVLLDKEMNGRLGDFGLA-RMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQ----T 550
             N+LLDK  + +L DFG   +M+  G V   T  VGT  Y++PEV  S           
Sbjct: 196 PDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDT-AVGTPDYISPEVLKSQGGDGYYGREC 254

Query: 551 DVFGFGILILEVLSGRRP 568
           D +  G+ + E+L G  P
Sbjct: 255 DWWSVGVFLYEMLVGDTP 272

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ... Length = 367

 Score = 77.0 bits (190), Expect = 3e-15
 Identities = 50/224 (22%), Positives = 97/224 (43%), Gaps = 31/224 (13%)

Query: 363 TKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISH--ENDGGTRAFLAEISSLGRLKH 420
            + +   + +G G  G V        G  +AVK++S   ++    +    E+  L  +KH
Sbjct: 28  PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKH 87

Query: 421 KSLVGLR-----GWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIR-----V 470
           ++++GL           E   + LV   M    L+  +        L+ ++ ++     +
Sbjct: 88  ENVIGLLDVFTPARSLEEFNDVYLVTHLMGA-DLNNIV----KCQKLT-DDHVQFLIYQI 141

Query: 471 LKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRVV 530
           L+    G+ Y+H      ++HRD+K SN+ ++++   ++ DFGLAR          T  V
Sbjct: 142 LR----GLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR----HTADEMTGYV 190

Query: 531 GTVGYLAPEV-FSSGRASTQTDVFGFGILILEVLSGRRPIEEGK 573
            T  Y APE+  +    +   D++  G ++ E+L   R +  G 
Sbjct: 191 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL-TGRTLFPGT 233

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus} Length = 476

 Score = 77.9 bits (192), Expect = 3e-15
 Identities = 66/221 (29%), Positives = 107/221 (48%), Gaps = 33/221 (14%)

Query: 372 IGVGGNGKVYKGVLEGGGAEIAVK-----RISHENDGG--TRAFLAEISSLGRLKHKSLV 424
           +GVG  GKV  G  E  G ++AVK     +I   +  G   R    EI +L   +H  ++
Sbjct: 24  LGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRR----EIQNLKLFRHPHII 79

Query: 425 GLRGWCKRE----KGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLY 480
            L      +       + +V +Y+  G L  +I +      L  +E  R+ + + +GV Y
Sbjct: 80  KLY-----QVISTPSDIFMVMEYVSGGELFDYICKNGR---LDEKESRRLFQQILSGVDY 131

Query: 481 LHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEV 540
            H      V+HRD+K  NVLLD  MN ++ DFGL+ M   G+   T+   G+  Y APEV
Sbjct: 132 CHR---HMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTS--CGSPNYAAPEV 186

Query: 541 FSSGR--ASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEM 579
             SGR  A  + D++  G+++  +L G  P ++   ++  +
Sbjct: 187 I-SGRLYAGPEVDIWSSGVILYALLCGTLPFDD--DHVPTL 224

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A* Length = 323

 Score = 75.4 bits (186), Expect = 6e-15
 Identities = 67/277 (24%), Positives = 106/277 (38%), Gaps = 44/277 (15%)

Query: 372 IGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLA-EISSLGRLKHKSLVGLRGWC 430
           +G G  G+V   V       +AVK +  +        +  EI     L H+++V   G  
Sbjct: 15  LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG-H 73

Query: 431 KREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVL 490
           +RE     L  +Y   G L   I    G   +   +  R    + AGV+YLH      + 
Sbjct: 74  RREGNIQYLFLEYCSGGELFDRIEPDIG---MPEPDAQRFFHQLMAGVVYLHG---IGIT 127

Query: 491 HRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVAS---TTRVVGTVGYLAPEVFSSGR-- 545
           HRDIK  N+LLD+  N ++ DFGLA +  +             GT+ Y+APE+    R  
Sbjct: 128 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKM--CGTLPYVAPELL-KRREF 184

Query: 546 ASTQTDVFGFGILILEVL-SGRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRAKGGFD 604
            +   DV+  GI +L  + +G  P ++   +  E                     +    
Sbjct: 185 HAEPVDVWSCGI-VLTAMLAGELPWDQPSDSCQEY----------------SDWKEKKTY 227

Query: 605 E-------DEVERVLHLGLLCAYPDPRARPTMRQVVK 634
                        +LH  +L    +P AR T+  + K
Sbjct: 228 LNPWKKIDSAPLALLH-KILV--ENPSARITIPDIKK 261

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} Length = 362

 Score = 75.8 bits (187), Expect = 7e-15
 Identities = 54/232 (23%), Positives = 91/232 (39%), Gaps = 36/232 (15%)

Query: 363 TKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRIS--HENDGGTRAF---------LAE 411
              ++ +  I  G  G V  GV +  G  +A+KR+     +                L E
Sbjct: 21  QSPYTVQRFISSGSYGAVCAGV-DSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLRE 79

Query: 412 ISSLGRLKHKSLVGL----RGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEER 467
           I  L    H +++GL      + +     L LV + M    L + I      +++S  + 
Sbjct: 80  IRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRT-DLAQVIHD--QRIVIS-PQH 135

Query: 468 IR-----VLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQ 522
           I+     +L     G+  LHE     V+HRD+   N+LL    +  + DF LAR      
Sbjct: 136 IQYFMYHILL----GLHVLHEA---GVVHRDLHPGNILLADNNDITICDFNLAR--EDTA 186

Query: 523 VASTTRVVGTVGYLAPEV-FSSGRASTQTDVFGFGILILEVLSGRRPIEEGK 573
            A+ T  V    Y APE+       +   D++  G ++ E+   R+ +  G 
Sbjct: 187 DANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMF-NRKALFRGS 237

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A Length = 286

 Score = 74.4 bits (183), Expect = 8e-15
 Identities = 38/260 (14%), Positives = 75/260 (28%), Gaps = 48/260 (18%)

Query: 371 VIGVGGNGKVYKGVLEGGGAEIAVKRISHE---NDGGTRAFLAEISSLGRLKHKSLVGLR 427
             G     + ++ +      ++A+  +  +    D   +  L+    L R+    +  + 
Sbjct: 38  FHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVL 97

Query: 428 GWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEK 487
                 +   ++V +++  GSL +     D S        IR ++ +AA     H     
Sbjct: 98  DVV-HTRAGGLVVAEWIRGGSLQEVA---DTSPSP--VGAIRAMQSLAAAADAAHR---A 148

Query: 488 KVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRAS 547
            V       S V +  +                G V     V+     +         A+
Sbjct: 149 GVALSIDHPSRVRVSID----------------GDV-----VLAYPATMPD-------AN 180

Query: 548 TQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRAKGGFDEDE 607
            Q D+ G G  +  +L  R P+ E          E    G+ ++  D             
Sbjct: 181 PQDDIRGIGASLYALLVNRWPLPEAGVRSGLAPAERDTAGQPIEPADIDRDIPFQISA-V 239

Query: 608 VERVLHLGLLCAYPDPRARP 627
             R +         D   R 
Sbjct: 240 AARSVQ-------GDGGIRS 252

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ... Length = 337

 Score = 74.9 bits (185), Expect = 9e-15
 Identities = 57/205 (27%), Positives = 92/205 (44%), Gaps = 19/205 (9%)

Query: 371 VIGVGGNGKVYKGVLEGGGAEIAVK-----RISHENDGGTRAFLAEISSLGRLKHKSLVG 425
           ++G G  GKV     +  G   A+K      I  +++      + E   L   +H  L  
Sbjct: 12  LLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDE--VAHTVTESRVLQNTRHPFLTA 69

Query: 426 LRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRV-LKDVAAGVLYLHEG 484
           L+ +  +    L  V +Y   G L    F      + + EER R    ++ + + YLH  
Sbjct: 70  LK-YAFQTHDRLCFVMEYANGGEL---FFHLSRERVFT-EERARFYGAEIVSALEYLHS- 123

Query: 485 WEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMH-GHGQVASTTRVVGTVGYLAPEVFSS 543
             + V++RDIK  N++LDK+ + ++ DFGL +     G    T    GT  YLAPEV   
Sbjct: 124 --RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKT--FCGTPEYLAPEVLED 179

Query: 544 GRASTQTDVFGFGILILEVLSGRRP 568
                  D +G G+++ E++ GR P
Sbjct: 180 NDYGRAVDWWGLGVVMYEMMCGRLP 204

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7 Length = 367

 Score = 74.7 bits (184), Expect = 2e-14
 Identities = 54/224 (24%), Positives = 97/224 (43%), Gaps = 45/224 (20%)

Query: 370 NVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAF---------LAEISSLGRLKH 420
             +G G  G V   V    GA++A+K++        R F           E+  L  ++H
Sbjct: 31  QPVGSGAYGAVCSAVDGRTGAKVAIKKLY-------RPFQSELFAKRAYRELRLLKHMRH 83

Query: 421 KSLVGLR-----GWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIR-----V 470
           ++++GL           +     LV  +M    L K +        L  E+RI+     +
Sbjct: 84  ENVIGLLDVFTPDETLDDFTDFYLVMPFMGT-DLGKLM----KHEKLG-EDRIQFLVYQM 137

Query: 471 LKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRVV 530
           LK    G+ Y+H      ++HRD+K  N+ ++++   ++ DFGLAR       +  T  V
Sbjct: 138 LK----GLRYIHAA---GIIHRDLKPGNLAVNEDCELKILDFGLAR----QADSEMTGYV 186

Query: 531 GTVGYLAPEV-FSSGRASTQTDVFGFGILILEVLSGRRPIEEGK 573
            T  Y APEV  +  R +   D++  G ++ E++   + + +G 
Sbjct: 187 VTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMI-TGKTLFKGS 229

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II} Length = 383

 Score = 74.8 bits (184), Expect = 2e-14
 Identities = 43/254 (16%), Positives = 85/254 (33%), Gaps = 51/254 (20%)

Query: 360 EAATKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRI-----------------SHEN- 401
           E ++K +S    +G G  G V +      G   A+K++                  H N 
Sbjct: 3   ETSSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPRYKNRELDIMKVLDHVNI 62

Query: 402 ---------------DGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMEN 446
                                              +          +   L ++ +Y+ +
Sbjct: 63  IKLVDYFYTTGDEEPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVPD 122

Query: 447 GSLDKWIFQCDGSMMLSCEERIR-----VLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLL 501
            +L K +     S        I      + +     V ++H      + HRDIK  N+L+
Sbjct: 123 -TLHKVLKSFIRSGRSIPMNLISIYIYQLFR----AVGFIHSL---GICHRDIKPQNLLV 174

Query: 502 DKEMNG-RLGDFGLARMHGHGQVASTTRVVGTVGYLAPEV-FSSGRASTQTDVFGFGILI 559
           + + N  +L DFG A+     +  S   +  +  Y APE+   +   +   D++  G + 
Sbjct: 175 NSKDNTLKLCDFGSAKKLIPSE-PSVAYIC-SRFYRAPELMLGATEYTPSIDLWSIGCVF 232

Query: 560 LEVLSGRRPIEEGK 573
            E++   +P+  G+
Sbjct: 233 GELI-LGKPLFSGE 245

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe} Length = 336

 Score = 73.9 bits (182), Expect = 3e-14
 Identities = 55/229 (24%), Positives = 94/229 (41%), Gaps = 50/229 (21%)

Query: 372 IGVGGNGKVYKGVLEGGGAEIAVK-----RISHENDGG--TRAFLAEISSLGRLKHKSLV 424
           +G G  GKV          ++A+K      +   +      R    EIS L  L+H  ++
Sbjct: 17  LGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVER----EISYLKLLRHPHII 72

Query: 425 GLRGWCKREKGSLMLVYDYMENGSLDKWIFQ----CDGSMM--------LSCEERIRVLK 472
            L              YD +        I        G +         ++ +E  R  +
Sbjct: 73  KL--------------YDVITT---PTDIVMVIEYAGGELFDYIVEKKRMTEDEGRRFFQ 115

Query: 473 DVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRVVGT 532
            +   + Y H     K++HRD+K  N+LLD  +N ++ DFGL+ +   G    T+   G+
Sbjct: 116 QIICAIEYCHR---HKIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNFLKTS--CGS 170

Query: 533 VGYLAPEVFSSGR--ASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEM 579
             Y APEV  +G+  A  + DV+  GI++  +L GR P ++    +  +
Sbjct: 171 PNYAAPEVI-NGKLYAGPEVDVWSCGIVLYVMLVGRLPFDD--EFIPNL 216

>3g51_A Ribosomal protein S6 kinase alpha-3; N-terminal kinase domain of P90 ribosomal S6 kinase 2, ATP- binding, nucleotide-binding, phosphoprotein; HET: ANP; 1.80A {Mus musculus} PDB: 2z7q_A* 2z7r_A* 2z7s_A* Length = 325

 Score = 73.4 bits (181), Expect = 3e-14
 Identities = 59/208 (28%), Positives = 101/208 (48%), Gaps = 23/208 (11%)

Query: 371 VIGVGGNGKVY---KGVLEGGGAEIAVK-----RISHENDGGTRAFLAEISSLGRLKHKS 422
           V+G G  GKV+   K          A+K      +   +   T     E   L  + H  
Sbjct: 31  VLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRT---KMERDILVEVNHPF 87

Query: 423 LVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRV-LKDVAAGVLYL 481
           +V L  +  + +G L L+ D++  G L     +    +M + EE ++  L ++A  + +L
Sbjct: 88  IVKLH-YAFQTEGKLYLILDFLRGGDL---FTRLSKEVMFT-EEDVKFYLAELALALDHL 142

Query: 482 HEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMH-GHGQVASTTRVVGTVGYLAPEV 540
           H      +++RD+K  N+LLD+E + +L DFGL++    H + A +    GTV Y+APEV
Sbjct: 143 HS---LGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYS--FCGTVEYMAPEV 197

Query: 541 FSSGRASTQTDVFGFGILILEVLSGRRP 568
            +    +   D + FG+L+ E+L+G  P
Sbjct: 198 VNRRGHTQSADWWSFGVLMFEMLTGTLP 225

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A* Length = 327

 Score = 73.3 bits (181), Expect = 3e-14
 Identities = 57/209 (27%), Positives = 99/209 (47%), Gaps = 23/209 (11%)

Query: 371 VIGVGGNGKVY---KGVLEGGGAEIAVKR------ISHENDGGTRAFLAEISSLGRLKHK 421
           V+G GG GKV+   K      G   A+K       + +  D  T    AE + L  +KH 
Sbjct: 24  VLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKD--TAHTKAERNILEEVKHP 81

Query: 422 SLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRV-LKDVAAGVLY 480
            +V L  +  +  G L L+ +Y+  G L     Q +   +   E+     L +++  + +
Sbjct: 82  FIVDLI-YAFQTGGKLYLILEYLSGGEL---FMQLEREGIFM-EDTACFYLAEISMALGH 136

Query: 481 LHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMH-GHGQVASTTRVVGTVGYLAPE 539
           LH+   K +++RD+K  N++L+ + + +L DFGL +     G V  T    GT+ Y+APE
Sbjct: 137 LHQ---KGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHT--FCGTIEYMAPE 191

Query: 540 VFSSGRASTQTDVFGFGILILEVLSGRRP 568
           +      +   D +  G L+ ++L+G  P
Sbjct: 192 ILMRSGHNRAVDWWSLGALMYDMLTGAPP 220

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vid_A* 3hng_A* Length = 359

 Score = 73.4 bits (180), Expect = 4e-14
 Identities = 48/193 (24%), Positives = 86/193 (44%), Gaps = 18/193 (9%)

Query: 455 QCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGL 514
           +      L+ E  I     VA G+ +L     +K +HRD+ + N+LL ++   ++ DFGL
Sbjct: 183 EDLYKDFLTLEHLICYSFQVAKGMEFLAS---RKCIHRDLAARNILLSEKNVVKICDFGL 239

Query: 515 ARMHGHGQV-ASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLS-GRRPIEEG 572
           AR                 + ++APE       + Q+DV+ FG+L+ E+ S G  P    
Sbjct: 240 ARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGV 299

Query: 573 KPNLVEMVWELMVQGKLLDALDARLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQV 632
           K +  E     + +G  + A D        +   E+ + +   L C + +P  RPT  ++
Sbjct: 300 KID--EEFCRRLKEGTRMRAPD--------YTTPEMYQTM---LDCWHGEPSQRPTFSEL 346

Query: 633 VKVLEGKIEAGIE 645
           V+ L   ++A  +
Sbjct: 347 VEHLGNLLQANAQ 359

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vid_A* 3hng_A* Length = 359

 Score = 47.6 bits (113), Expect = 8e-06
 Identities = 22/92 (23%), Positives = 42/92 (45%), Gaps = 7/92 (7%)

Query: 369 ENVIGVGGNGKVYKGVLEG-----GGAEIAVKRI-SHENDGGTRAFLAEISSLGRL-KHK 421
              +G G  G+V +    G         +AVK +         RA ++E+  L  +  H 
Sbjct: 27  GKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHL 86

Query: 422 SLVGLRGWCKREKGSLMLVYDYMENGSLDKWI 453
           ++V L G C +  G LM++ ++ + G+L  ++
Sbjct: 87  NVVNLLGACTKPGGPLMVIVEFCKFGNLSTYL 118

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A* Length = 345

 Score = 72.3 bits (178), Expect = 8e-14
 Identities = 59/209 (28%), Positives = 93/209 (44%), Gaps = 26/209 (12%)

Query: 371 VIGVGGNGKVYKGVLEGGGAEIAVK-----RISHENDG----GTRAFLAEISSLGRLKHK 421
           VIG G   KV    L+      A+K      ++ + D       +    + S      H 
Sbjct: 16  VIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQAS-----NHP 70

Query: 422 SLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRV-LKDVAAGVLY 480
            LVGL   C + +  L  V +Y+  G L   +F       L  EE  R    +++  + Y
Sbjct: 71  FLVGLH-SCFQTESRLFFVIEYVNGGDL---MFHMQRQRKLP-EEHARFYSAEISLALNY 125

Query: 481 LHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMH-GHGQVASTTRVVGTVGYLAPE 539
           LHE   + +++RD+K  NVLLD E + +L D+G+ +     G   ST    GT  Y+APE
Sbjct: 126 LHE---RGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTST--FCGTPNYIAPE 180

Query: 540 VFSSGRASTQTDVFGFGILILEVLSGRRP 568
           +          D +  G+L+ E+++GR P
Sbjct: 181 ILRGEDYGFSVDWWALGVLMFEMMAGRSP 209

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A* Length = 353

 Score = 72.3 bits (178), Expect = 8e-14
 Identities = 60/233 (25%), Positives = 103/233 (44%), Gaps = 38/233 (16%)

Query: 363 TKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRIS---HENDGGTRAFLAEISSLGRLK 419
           +  F  ++++G G  G V     +  G  +A+K+I           R  L EI  L   K
Sbjct: 10  SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFA-LRT-LREIKILKHFK 67

Query: 420 HKSLVGL----RGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIR-----V 470
           H++++ +    R         + ++ + M+   L + I     + MLS ++ I+      
Sbjct: 68  HENIITIFNIQRPDSFENFNEVYIIQELMQT-DLHRVI----STQMLS-DDHIQYFIYQT 121

Query: 471 LKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVAST---- 526
           L+     V  LH      V+HRD+K SN+L++   + ++ DFGLAR+       ++    
Sbjct: 122 LR----AVKVLHGS---NVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTG 174

Query: 527 -----TRVVGTVGYLAPEV-FSSGRASTQTDVFGFGILILEVLSGRRPIEEGK 573
                   V T  Y APEV  +S + S   DV+  G ++ E+   RRPI  G+
Sbjct: 175 QQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELF-LRRPIFPGR 226

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A Length = 361

 Score = 72.4 bits (178), Expect = 9e-14
 Identities = 56/217 (25%), Positives = 83/217 (38%), Gaps = 27/217 (12%)

Query: 372 IGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCK 431
           IG G  G       +     +AVK I             EI +   L+H ++V  +    
Sbjct: 28  IGSGNFGVARLMRDKLTKELVAVKYIERGAAIDENVQR-EIINHRSLRHPNIVRFK---- 82

Query: 432 RE----KGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEK 487
            E       L ++ +Y   G L + I         S +E     + + +GV Y H     
Sbjct: 83  -EVILTPTHLAIIMEYASGGELYERICNAGR---FSEDEARFFFQQLLSGVSYCHS---M 135

Query: 488 KVLHRDIKSSNVLLDKEMNGRL--GDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGR 545
           ++ HRD+K  N LLD     RL   DFG ++         +T  VGT  Y+APEV    +
Sbjct: 136 QICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKST--VGTPAYIAPEVL-LRQ 192

Query: 546 --ASTQTDVFGFGILILEVL-SGRRPIEEGKPNLVEM 579
                  DV+  G+  L V+  G  P E+  P     
Sbjct: 193 EYDGKIADVWSCGV-TLYVMLVGAYPFED--PEEPRD 226

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus} Length = 396

 Score = 72.4 bits (178), Expect = 1e-13
 Identities = 62/234 (26%), Positives = 100/234 (42%), Gaps = 21/234 (8%)

Query: 346 ELEYWPHRITYQEIEAATKGFSEEN-----VIGVGGNGKVYKGVLEGGGAEIAVKRISHE 400
            +E     +  +E   A+     ++     VIG G   KV    L+      A++ +  E
Sbjct: 29  GIEEEKEAMNTRESGKASSSLGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKE 88

Query: 401 N---DGGTRAFLAEISSLGR-LKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQC 456
               D        E     +   H  LVGL   C + +  L  V +Y+  G L   +F  
Sbjct: 89  LVNDDEDIDWVQTEKHVFEQASNHPFLVGLH-SCFQTESRLFFVIEYVNGGDL---MFHM 144

Query: 457 DGSMMLSCEERIRV-LKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLA 515
                L  EE  R    +++  + YLHE   + +++RD+K  NVLLD E + +L D+G+ 
Sbjct: 145 QRQRKLP-EEHARFYSAEISLALNYLHE---RGIIYRDLKLDNVLLDSEGHIKLTDYGMC 200

Query: 516 RMH-GHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRP 568
           +     G   ST    GT  Y+APE+          D +  G+L+ E+++GR P
Sbjct: 201 KEGLRPGDTTST--FCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSP 252

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A* Length = 345

 Score = 71.5 bits (176), Expect = 2e-13
 Identities = 51/204 (25%), Positives = 91/204 (44%), Gaps = 16/204 (7%)

Query: 371 VIGVGGNGKVYKGVLEGGGAEIAVKRISHE---NDGGTRAFLAEISSLGR-LKHKSLVGL 426
           ++G G  GKV+    +      A+K +  +    D      + E   L    +H  L  +
Sbjct: 24  MLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHM 83

Query: 427 RGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRV-LKDVAAGVLYLHEGW 485
                + K +L  V +Y+  G L   I  C          R      ++  G+ +LH   
Sbjct: 84  F-CTFQTKENLFFVMEYLNGGDLMYHIQSCH---KFD-LSRATFYAAEIILGLQFLHS-- 136

Query: 486 EKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMH-GHGQVASTTRVVGTVGYLAPEVFSSG 544
            K +++RD+K  N+LLDK+ + ++ DFG+ + +       +T    GT  Y+APE+    
Sbjct: 137 -KGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNT--FCGTPDYIAPEILLGQ 193

Query: 545 RASTQTDVFGFGILILEVLSGRRP 568
           + +   D + FG+L+ E+L G+ P
Sbjct: 194 KYNHSVDWWSFGVLLYEMLIGQSP 217

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A* Length = 353

 Score = 71.5 bits (176), Expect = 2e-13
 Identities = 54/206 (26%), Positives = 89/206 (43%), Gaps = 20/206 (9%)

Query: 371 VIGVGGNGKVYKGVLEGGGAEIAVK-----RISHENDGGTRAFLAEISSLGR-LKHKSLV 424
           V+G G  GKV     +G     AVK      +  ++D      + E   L    K   L 
Sbjct: 27  VLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDD--VECTMVEKRVLALPGKPPFLT 84

Query: 425 GLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRV-LKDVAAGVLYLHE 483
            L   C +    L  V +Y+  G L   ++          E        ++A G+ +L  
Sbjct: 85  QLH-SCFQTMDRLYFVMEYVNGGDL---MYHIQQVGRFK-EPHAVFYAAEIAIGLFFLQS 139

Query: 484 GWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMH-GHGQVASTTRVVGTVGYLAPEVFS 542
              K +++RD+K  NV+LD E + ++ DFG+ + +   G    T    GT  Y+APE+ +
Sbjct: 140 ---KGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKT--FCGTPDYIAPEIIA 194

Query: 543 SGRASTQTDVFGFGILILEVLSGRRP 568
                   D + FG+L+ E+L+G+ P
Sbjct: 195 YQPYGKSVDWWAFGVLLYEMLAGQAP 220

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7 Length = 355

 Score = 70.4 bits (173), Expect = 4e-13
 Identities = 54/224 (24%), Positives = 99/224 (44%), Gaps = 25/224 (11%)

Query: 371 VIGVGGNGKVY---KGVLEGGGAEIAVKRIS----HENDGGTRAFLAEISSLGRLKHKS- 422
           V+G G  GKV+   K      G   A+K +      +    T     E   L  ++    
Sbjct: 61  VLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPF 120

Query: 423 LVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRV-LKDVAAGVLYL 481
           LV L  +  + +  L L+ DY+  G L             + E  +++ + ++   + +L
Sbjct: 121 LVTLH-YAFQTETKLHLILDYINGGEL---FTHLSQRERFT-EHEVQIYVGEIVLALEHL 175

Query: 482 HEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLAR--MHGHGQVASTTRVVGTVGYLAPE 539
           H+     +++RDIK  N+LLD   +  L DFGL++  +    + A      GT+ Y+AP+
Sbjct: 176 HK---LGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYD--FCGTIEYMAPD 230

Query: 540 VFSSGRASTQTDV--FGFGILILEVLSGRRP--IEEGKPNLVEM 579
           +   G +     V  +  G+L+ E+L+G  P  ++  K +  E+
Sbjct: 231 IVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEI 274

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A* Length = 299

 Score = 69.2 bits (170), Expect = 5e-13
 Identities = 35/153 (22%), Positives = 63/153 (41%), Gaps = 18/153 (11%)

Query: 371 VIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRL-KHKSLVGLRGW 429
           V+G+G NGKV +   +    + A+K +             E+    R  +   +V +   
Sbjct: 25  VLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARR-----EVELHWRASQCPHIVRIVDV 79

Query: 430 C---KREKGSLMLVYDYMENGSL-DKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGW 485
                  +  L++V + ++ G L  +   +  G    +  E   ++K +   + YLH   
Sbjct: 80  YENLYAGRKCLLIVMECLDGGELFSRIQDR--GDQAFTEREASEIMKSIGEAIQYLH--- 134

Query: 486 EKKVLHRDIKSSNVLL-DKEMNG--RLGDFGLA 515
              + HRD+K  N+L   K  N   +L DFG A
Sbjct: 135 SINIAHRDVKPENLLYTSKRPNAILKLTDFGFA 167

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens} Length = 353

 Score = 70.0 bits (172), Expect = 5e-13
 Identities = 56/204 (27%), Positives = 90/204 (44%), Gaps = 16/204 (7%)

Query: 371 VIGVGGNGKVYKGVLEGGGAEIAVKRISHEN---DGGTRAFLAEISSLGR-LKHKSLVGL 426
           V+G G  GKV    ++  G   AVK +  +    D      + E   L     H  L  L
Sbjct: 30  VLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQL 89

Query: 427 RGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRV-LKDVAAGVLYLHEGW 485
              C +    L  V +++  G L   I +         E R R    ++ + +++LH+  
Sbjct: 90  F-CCFQTPDRLFFVMEFVNGGDLMFHIQKSR---RFD-EARARFYAAEIISALMFLHD-- 142

Query: 486 EKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMH-GHGQVASTTRVVGTVGYLAPEVFSSG 544
            K +++RD+K  NVLLD E + +L DFG+ +    +G   +T    GT  Y+APE+    
Sbjct: 143 -KGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNGVTTAT--FCGTPDYIAPEILQEM 199

Query: 545 RASTQTDVFGFGILILEVLSGRRP 568
                 D +  G+L+ E+L G  P
Sbjct: 200 LYGPAVDWWAMGVLLYEMLCGHAP 223

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A* Length = 373

 Score = 69.6 bits (171), Expect = 8e-13
 Identities = 61/206 (29%), Positives = 91/206 (44%), Gaps = 20/206 (9%)

Query: 371 VIGVGGNGKVYKGVLEGGGAEIAVK-----RISHENDGGTRAFLAEISSLGR-LKHKSLV 424
           VIG G  GKV     +      AVK      I  + +   +  ++E + L + +KH  LV
Sbjct: 45  VIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKE--EKHIMSERNVLLKNVKHPFLV 102

Query: 425 GLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRV-LKDVAAGVLYLHE 483
           GL  +  +    L  V DY+  G L    +          E R R    ++A+ + YLH 
Sbjct: 103 GLH-FSFQTADKLYFVLDYINGGEL---FYHLQRERCFL-EPRARFYAAEIASALGYLHS 157

Query: 484 GWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMH-GHGQVASTTRVVGTVGYLAPEVFS 542
                +++RD+K  N+LLD + +  L DFGL + +  H    ST    GT  YLAPEV  
Sbjct: 158 ---LNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNSTTST--FCGTPEYLAPEVLH 212

Query: 543 SGRASTQTDVFGFGILILEVLSGRRP 568
                   D +  G ++ E+L G  P
Sbjct: 213 KQPYDRTVDWWCLGAVLYEMLYGLPP 238

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ... Length = 350

 Score = 67.7 bits (166), Expect = 3e-12
 Identities = 48/211 (22%), Positives = 83/211 (39%), Gaps = 24/211 (11%)

Query: 366 FSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAF---LAEISSLGRLKHKS 422
           F     +G G  G+V     +  G   A+K +  +     +     L E   L  +    
Sbjct: 43  FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102

Query: 423 LVGLRGWCKREKGSLMLVYDYMENGSL-----DKWIFQCDGSMMLSCEERIRVLKDVAAG 477
           LV L    K    +L +V +Y+  G +         F    +   + +        +   
Sbjct: 103 LVKLEFSFKDNS-NLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQ--------IVLT 153

Query: 478 VLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLA 537
             YLH      +++RD+K  N+L+D++   ++ DFG A+         T  + GT   LA
Sbjct: 154 FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG----RTWTLCGTPEALA 206

Query: 538 PEVFSSGRASTQTDVFGFGILILEVLSGRRP 568
           PE+  S   +   D +  G+LI E+ +G  P
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237

>1gv9_A P58/ergic-53; lectin, carbohydrate binding; 1.46A {Rattus norvegicus} SCOP: b.29.1.13 PDB: 1r1z_A 3a4u_A 3lcp_A Length = 260

 Score = 66.4 bits (161), Expect = 3e-12
 Identities = 38/261 (14%), Positives = 75/261 (28%), Gaps = 40/261 (15%)

Query: 17  FLSFE-SISAVDFVFNGFNSSNLSLYGTATVESRILTLTNSTTFTIGRALYPSKIPTKRP 75
              ++ S      V +       +  G A   +  + +  S     G     +K   +  
Sbjct: 29  RFEYKYSFKGPHLVQSDGTVPFWAHAGNAIPSADQIRIAPSLKSQRGSVWTKTKAAFEN- 87

Query: 76  NSSYVYPFSTSFIFAMAPYKGVLAGHGLVFLFVPFHGIKGATEAQHLGLFNRTNDGNSSN 135
                  +     F +   +G +   GL   +    G+ G        +F   +  N   
Sbjct: 88  -------WEVEVTFRVTG-RGRIGADGLAIWYTENQGLDG-------PVFGSADMWNG-- 130

Query: 136 HVFGVEFDVFKNQEFNDIDENHVGIDVNSLTSVSAHAAGYWPDNQTDSSGSNSNSGTGDD 195
              G+ FD F N    +     V  +   +            D+Q D +     S   D 
Sbjct: 131 --VGIFFDSFDNDGKKNNPAIVVVGNNGQINY----------DHQNDGATQALASCQRD- 177

Query: 196 EKSFKELKLNNGKNYQVWIDYADSFINITMVEAGMKRPKRPLLSVPLNLSGVLEDEMYVG 255
                    N     +  I Y    + + +                +  + V+  + + G
Sbjct: 178 -------FRNKPYPVRAKITYYQKTLTVMINNGFTPDKNDYEFCAKVE-NMVIPTQGHFG 229

Query: 256 FTAATGQLVESHKILAWSFSN 276
            +AATG L + H +L++    
Sbjct: 230 ISAATGGLADDHDVLSFLTFQ 250

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii} Length = 458

 Score = 67.2 bits (164), Expect = 7e-12
 Identities = 49/246 (19%), Positives = 91/246 (36%), Gaps = 54/246 (21%)

Query: 371 VIGVGGNGKVYKGVLEGGGAEIAVKRISH--ENDGGTRAFLAEISSLGRLKHKSLVGLRG 428
           +IG G  G V +   +     +A+K+I    E+    +  L EI+ L RL H  +V +  
Sbjct: 60  LIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLD 119

Query: 429 WCKREKGSLM----LVYDYMENGSLDKWIFQCDGSMMLSCEERIR-----VLKDVAAGVL 479
               +         +V +  ++    K        + L+ E  I+     +L     GV 
Sbjct: 120 IVIPKDVEKFDELYVVLEIADS-DFKKLF---RTPVYLT-ELHIKTLLYNLLV----GVK 170

Query: 480 YLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRVVGTVG----- 534
           Y+H      +LHRD+K +N L++++ + ++ DFGLAR   + +  ++   +         
Sbjct: 171 YVHSA---GILHRDLKPANCLVNQDCSVKVCDFGLARTVDYPENGNSQLPISPREDDMNL 227

Query: 535 ---------------------YLAPEV-FSSGRASTQTDVFG----FGILILEVLSGRRP 568
                                Y APE+       +   DV+     F  L+  +      
Sbjct: 228 VTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNMIKENVAY 287

Query: 569 IEEGKP 574
             +  P
Sbjct: 288 HADRGP 293

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A* Length = 432

 Score = 65.9 bits (161), Expect = 2e-11
 Identities = 55/282 (19%), Positives = 100/282 (35%), Gaps = 69/282 (24%)

Query: 363 TKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAF---------LAEIS 413
              +  +++IG G  G VY    +     +A+K++        R F         L EI+
Sbjct: 25  PDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKV-------NRMFEDLIDCKRILREIT 77

Query: 414 SLGRLKHKSLVGLRGWCK----REKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIR 469
            L RLK   ++ L          +   L +V +  ++  L K        + L+ EE I+
Sbjct: 78  ILNRLKSDYIIRLYDLIIPDDLLKFDELYIVLEIADS-DLKKLFKT---PIFLT-EEHIK 132

Query: 470 -----VLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVA 524
                +L     G  ++HE     ++HRD+K +N LL+++ + ++ DFGLAR     +  
Sbjct: 133 TILYNLLL----GENFIHES---GIIHRDLKPANCLLNQDCSVKVCDFGLARTINSEKDT 185

Query: 525 STTRVVGTVG---------------------YLAPEV-FSSGRASTQTDVFGFGILILEV 562
           +    +                         Y APE+       +   D++  G +  E+
Sbjct: 186 NIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAEL 245

Query: 563 LSG----------RRPIEEGKPNLVEMVWELMVQGKLLDALD 594
           L+           R P+  G             +       D
Sbjct: 246 LNMLQSHINDPTNRFPLFPGSSCFPLSPDRNSKKVHEKSNRD 287

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II} Length = 388

 Score = 64.7 bits (158), Expect = 3e-11
 Identities = 62/245 (25%), Positives = 101/245 (41%), Gaps = 58/245 (23%)

Query: 366 FSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAF---------LAEISSLG 416
           +     +G G  G V+K +    G  +AVK+I         AF           EI  L 
Sbjct: 11  YELVKKLGKGAYGIVWKSIDRRTGEVVAVKKI-------FDAFQNSTDAQRTFREIMILT 63

Query: 417 RLK-HKSLVGLRGWCKREKGS-LMLVYDYMENGSLDKWIFQCDGSMMLSCEERIR----- 469
            L  H+++V L    + +    + LV+DYME   L   I     + +L      +     
Sbjct: 64  ELSGHENIVNLLNVLRADNDRDVYLVFDYMET-DLHAVI----RANILE-PVHKQYVVYQ 117

Query: 470 VLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRV 529
           ++K     + YLH G    +LHRD+K SN+LL+ E + ++ DFGL+R   + +  +    
Sbjct: 118 LIK----VIKYLHSG---GLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIP 170

Query: 530 --------------------VGTVGYLAPEV-FSSGRASTQTDVFGFGILILEVLSGRRP 568
                               V T  Y APE+   S + +   D++  G ++ E+L   +P
Sbjct: 171 LSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEIL-CGKP 229

Query: 569 IEEGK 573
           I  G 
Sbjct: 230 IFPGS 234

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7 Length = 318

 Score = 63.7 bits (156), Expect = 4e-11
 Identities = 46/161 (28%), Positives = 75/161 (46%), Gaps = 13/161 (8%)

Query: 409 LAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERI 468
             E   L  + H  ++ + G  +  +  + ++ DY+E G L         S         
Sbjct: 54  NDERLMLSIVTHPFIIRMWGTFQDAQ-QIFMIMDYIEGGEL---FSLLRKSQRFP-NPVA 108

Query: 469 RV-LKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTT 527
           +    +V   + YLH    K +++RD+K  N+LLDK  + ++ DFG A+         T 
Sbjct: 109 KFYAAEVCLALEYLHS---KDIIYRDLKPENILLDKNGHIKITDFGFAKYVPD----VTY 161

Query: 528 RVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRP 568
            + GT  Y+APEV S+   +   D + FGILI E+L+G  P
Sbjct: 162 TLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTP 202

>2dur_A VIP36;, vesicular integral-membrane protein VIP36; beta sandwich, carbohydrate binding protein, cargo receptor, transport; HET: MAN; 1.65A {Canis lupus familiaris} PDB: 2dup_A 2duq_A* 2duo_A* 2e6v_A* Length = 253

 Score = 62.2 bits (150), Expect = 8e-11
 Identities = 38/289 (13%), Positives = 83/289 (28%), Gaps = 42/289 (14%)

Query: 17  FLSFE-SISAVDFVFNGFNSSNLSLYGTATVESRILTLTNSTTFTIGRALYPSKIPTKRP 75
            L  E S+          +       G+  + S+ + LT       G          K  
Sbjct: 5   HLKREHSLIKPYQGVGSSSMPLWDFQGSTILTSQYVRLTPDERSKEGSIWNHQPCFLKD- 63

Query: 76  NSSYVYPFSTSFIFAM-APYKGVLAGHGLVFLFVPFHGIKGATEAQHLGLFNRTNDGNSS 134
                  +     F +    K  L G G+   +     + G        +F   ++ +  
Sbjct: 64  -------WEMHVHFKVHGTGKKNLHGDGIALWYTRDRLVPG-------PVFGSKDNFHG- 108

Query: 135 NHVFGVEFDVFKNQEFNDIDENHVGIDVNSLTSVSAHAAGYWPDNQTDSSGSNSNSGTGD 194
                +  D + N E  +    ++ + VN+ +    H+     D +       +      
Sbjct: 109 ---LAIFLDTYPNDETTERVFPYISVMVNNGSLSYDHS----KDGRWTELAGCTAD---- 157

Query: 195 DEKSFKELKLNNGKNYQVWIDYADSFINITMVEAGMKRPKRPLLSVPLNLSGVLEDEMYV 254
                     N   +  + + Y+   + +          K  +    + L        Y 
Sbjct: 158 --------FRNRDHDTFLAVRYSRGRLTVMTDLEDKNEWKNCIDITGVRLP----TGYYF 205

Query: 255 GFTAATGQLVESHKILAWSFSNTKFSLSEELITSGLPSFVLPKDSIFKS 303
           G +A TG L ++H I++          + +   +   + + P  +  KS
Sbjct: 206 GASAGTGDLSDNHDIISMKLFQLMVEHTPD-EENIDWTKIEPSVNFLKS 253

>2ltn_B PEA lectin, beta chain; 1.70A {Pisum sativum} SCOP: b.29.1.1 PDB: 1hkd_B 1rin_B* 1ofs_B* 1bqp_B* 1loe_B 1loa_B* 1loc_B* 1lod_B* 1lob_B 1lof_B* 1log_B* 1lof_D* 1les_B* 2b7y_B* 1lgc_B* 1lgb_B* 1len_B 1lem_B 2lal_B Length = 52

 Score = 56.8 bits (137), Expect = 8e-11
 Identities = 14/40 (35%), Positives = 26/40 (65%)

Query: 238 LSVPLNLSGVLEDEMYVGFTAATGQLVESHKILAWSFSNT 277
           LS  ++L  V+ + + +GF+A TG    +H++L+WSF + 
Sbjct: 6   LSDVVSLKDVVPEWVRIGFSATTGAEYAAHEVLSWSFHSE 45

>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A Length = 336

 Score = 51.8 bits (123), Expect = 4e-07
 Identities = 42/248 (16%), Positives = 73/248 (29%), Gaps = 61/248 (24%)

Query: 362 ATKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGT--------RAFLAEIS 413
            T+       IG G  G+V++ + +     +A+K I+ E                L EI 
Sbjct: 18  PTEKLQRCEKIGEGVFGEVFQTIADHT--PVAIKIIAIEGPDLVNGSHQKTFEEILPEII 75

Query: 414 SLGRL---------KHKSLVGLRGWC-----------------KREKGSLMLVYDYMENG 447
               L         + +  +GL                        KGS     D+ ++ 
Sbjct: 76  ISKELSLLSGEVCNRTEGFIGLNSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDD 135

Query: 448 SLDKWIFQCDGSMML--------SCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNV 499
            L   +    G + L        S      +L  + A +         +  HRD+   NV
Sbjct: 136 QLFIVLEFEFGGIDLEQMRTKLSSLATAKSILHQLTASLAVAEA--SLRFEHRDLHWGNV 193

Query: 500 LLDKEMNGRLGDFGLARMHGHG----------QVASTTRVVGTVGY----LAPEVFSSGR 545
           LL K    +L      +                  S     G V +    +  ++F +G 
Sbjct: 194 LLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDGIVVFCDVSMDEDLF-TGD 252

Query: 546 ASTQTDVF 553
              Q D++
Sbjct: 253 GDYQFDIY 260

>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A* Length = 330

 Score = 49.3 bits (118), Expect = 2e-06
 Identities = 31/164 (18%), Positives = 57/164 (34%), Gaps = 41/164 (25%)

Query: 372 IGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRG--- 428
           IG G  G++  G        +A+K    ++                  +K L    G   
Sbjct: 17  IGCGNFGELRLGKNLYTNEYVAIKLEPMKSRAPQLHLEYRF-------YKQLGSGDGIPQ 69

Query: 429 --WCKREKGSLMLVYDYMENG-SLDKWIFQCDGSM------MLSCE--ERIRVLKDVAAG 477
             +         +V + +  G SL+     CD +       M++ +   R+         
Sbjct: 70  VYYFGPCGKYNAMVLELL--GPSLEDLFDLCDRTFSLKTVLMIAIQLISRME-------- 119

Query: 478 VLYLHEGWEKKVLHRDIKSSNVLLDKEMNGR-----LGDFGLAR 516
             Y+H    K +++RD+K  N L+ +  N       + DF LA+
Sbjct: 120 --YVHS---KNLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAK 158

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A* Length = 397

 Score = 48.7 bits (116), Expect = 4e-06
 Identities = 35/248 (14%), Positives = 69/248 (27%), Gaps = 88/248 (35%)

Query: 469 RVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLL--------------------------- 501
           ++++ V  G+ YLH   + +++H DIK  N+LL                           
Sbjct: 150 KIIQQVLQGLDYLHT--KCRIIHTDIKPENILLSVNEQYIRRLAAEATEWQRSGAPPPSG 207

Query: 502 ----------------------DKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPE 539
                                  +++  ++ D G A           T  + T  Y + E
Sbjct: 208 SAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKHF----TEDIQTRQYRSLE 263

Query: 540 VFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPN--------LVEMV----------- 580
           V      +T  D++    +  E+ +G    E             +  ++           
Sbjct: 264 VLIGSGYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLI 323

Query: 581 --WELMVQ-----GKLLDA-------LDARLRAKGGFDEDEVERVLHLGLLCAYPDPRAR 626
              +   +     G L          L   L  K  + ++E        L      P  R
Sbjct: 324 VAGKYSKEFFTKKGDLKHITKLKPWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKR 383

Query: 627 PTMRQVVK 634
            T  + ++
Sbjct: 384 ATAAECLR 391

>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens} Length = 345

 Score = 47.4 bits (113), Expect = 8e-06
 Identities = 34/170 (20%), Positives = 62/170 (36%), Gaps = 38/170 (22%)

Query: 372 IGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAF--------LAEISSLGRLKHKSL 423
           IG GG G +Y         + A   +  E       F        +A+   + +   +  
Sbjct: 45  IGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQ 104

Query: 424 VGLRG-----WC----KREKGSLMLVYDYMENG-SLDKWIFQCDGSMMLSC-----EERI 468
           +   G            + +    +V + +  G  L K I   +G+   S         +
Sbjct: 105 LDYLGIPLFYGSGLTEFKGRSYRFMVMERL--GIDLQK-ISGQNGTFKKSTVLQLGIRML 161

Query: 469 RVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGR--LGDFGLAR 516
            VL+       Y+HE    + +H DIK++N+LL  +   +  L D+GL+ 
Sbjct: 162 DVLE-------YIHE---NEYVHGDIKAANLLLGYKNPDQVYLADYGLSY 201

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 48.3 bits (114), Expect = 8e-06
 Identities = 52/409 (12%), Positives = 108/409 (26%), Gaps = 120/409 (29%)

Query: 327 FLIKRKQRRAREREEMEDWELEYWPHRITYQEIEAATKGF------------------SE 368
           FL+   +   R+   M    +E       Y + +   K                      
Sbjct: 93  FLMSPIKTEQRQPSMMTRMYIEQ--RDRLYNDNQVFAKYNVSRLQPYLKLRQALLELRPA 150

Query: 369 ENVI--GVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAEIS--SLGRLKHKSLV 424
           +NV+  GV G+G   K  +    A          +         +I   +L        V
Sbjct: 151 KNVLIDGVLGSG---KTWV----ALDVCL-----SYKVQCKMDFKIFWLNLKNCNSPETV 198

Query: 425 --GLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIR---VLKDVAAGVL 479
              L+    +   +     D+  N  L     Q +   +L  +       VL +V     
Sbjct: 199 LEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNV----- 253

Query: 480 YLHEGWEKKVLHR-DIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAP 538
                   K  +  ++    +LL                        TTR      +L+ 
Sbjct: 254 -----QNAKAWNAFNLSCK-ILL------------------------TTRFKQVTDFLSA 283

Query: 539 ----EVFSSGRASTQTDVFGFGIL--ILEVLSGRRPIE--EGKPNLVEMVWELMVQG--- 587
                +     + T T      +L   L+      P E     P  + ++ E +  G   
Sbjct: 284 ATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTNPRRLSIIAESIRDGLAT 343

Query: 588 ----------KLLDALDARLRAKGGFDEDEVERVLH-LGLLCAYPDPRARPTMRQVVKVL 636
                     KL   +++ L      +  E  ++   L +    P     PT   ++ ++
Sbjct: 344 WDNWKHVNCDKLTTIIESSLNV---LEPAEYRKMFDRLSVF---PPSAHIPT--ILLSLI 395

Query: 637 EGKIEAGIENETEDMDAYLLQQVKSKDMWANYSRSFGYGYATHPTFHDI 685
              +    +++   +    + ++    +     +              I
Sbjct: 396 WFDVI---KSDVMVV----VNKLHKYSLVEKQPKESTISI------PSI 431

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 45.6 bits (107), Expect = 5e-05
 Identities = 50/315 (15%), Positives = 89/315 (28%), Gaps = 111/315 (35%)

Query: 429 WCKREKGSLMLVYDYMENGSLDK---WIF--------QCDGSMMLSCEERIRVLKDVAAG 477
           W    K    +V  ++E   L     ++         Q      +  E+R R+  D    
Sbjct: 69  WTLLSKQE-EMVQKFVE-EVLRINYKFLMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQVF 126

Query: 478 VLY----LHEGWE-KKVLHRDIKSSNVLLDKEMNGRLGDFG---LARMHGHGQVASTTRV 529
             Y    L    + ++ L     + NVL+D    G LG  G   +A       V  + +V
Sbjct: 127 AKYNVSRLQPYLKLRQALLELRPAKNVLID----GVLG-SGKTWVA-----LDVCLSYKV 176

Query: 530 VGTVGYLAPEVF--SSGRASTQTDVFGFGILILEVL----------------SGRRPIEE 571
              + +   ++F  +    ++   V    + +L+ L                + +  I  
Sbjct: 177 QCKMDF---KIFWLNLKNCNSPETV----LEMLQKLLYQIDPNWTSRSDHSSNIKLRIHS 229

Query: 572 GKPNLVEM---------------VWELMV------QGKLL---------DALDARLR--- 598
            +  L  +               V             K+L         D L A      
Sbjct: 230 IQAELRRLLKSKPYENCLLVLLNVQNAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHI 289

Query: 599 ----AKGGFDEDEVERVLHLGLLCAYPD-PRARPTMRQVVKVLEGKIEAGIENETEDMDA 653
                      DEV+ +L   L C   D P      R+V+     ++ + I     D   
Sbjct: 290 SLDHHSMTLTPDEVKSLLLKYLDCRPQDLP------REVLTTNPRRL-SIIAESIRDG-- 340

Query: 654 YLLQQVKSKDMWANY 668
                      W N+
Sbjct: 341 --------LATWDNW 347

>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A* Length = 298

 Score = 47.0 bits (112), Expect = 1e-05
 Identities = 34/165 (20%), Positives = 62/165 (37%), Gaps = 41/165 (24%)

Query: 372 IGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRG--- 428
           IG G  G +++G       ++A+K     +D                 +K L G  G   
Sbjct: 18  IGEGSFGVIFEGTNLLNNQQVAIKFEPRRSDAPQLRDEYRT-------YKLLAGCTGIPN 70

Query: 429 --WCKREKGSLMLVYDYMENG-SLDKWIFQCDGSM------MLSCE--ERIRVLKDVAAG 477
             +  +E    +LV D +  G SL+  +  C          M + +   R++        
Sbjct: 71  VYYFGQEGLHNVLVIDLL--GPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQ-------- 120

Query: 478 VLYLHEGWEKKVLHRDIKSSNVLLDKEMNGR-----LGDFGLARM 517
              +HE   K +++RDIK  N L+ +  +       + DFG+ + 
Sbjct: 121 --SIHE---KSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKF 160

>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A Length = 296

 Score = 46.6 bits (111), Expect = 1e-05
 Identities = 43/179 (24%), Positives = 66/179 (36%), Gaps = 29/179 (16%)

Query: 372 IGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRG--- 428
           IG G  G +Y G     G E+A+K    +          E         K + G  G   
Sbjct: 17  IGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQ--LHIESKIY-----KMMQGGVGIPT 69

Query: 429 --WCKREKGSLMLVYDYMENG-SLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGW 485
             WC  E    ++V + +  G SL+     C      S +  + +   + + + Y+H   
Sbjct: 70  IRWCGAEGDYNVMVMELL--GPSLEDLFNFCSRKF--SLKTVLLLADQMISRIEYIHS-- 123

Query: 486 EKKVLHRDIKSSNVLLDKEMNG---RLGDFGLARM------HGHGQVASTTRVVGTVGY 535
            K  +HRD+K  N L+     G    + DFGLA+       H H        + GT  Y
Sbjct: 124 -KNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARY 181

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A Length = 373

 Score = 46.2 bits (110), Expect = 2e-05
 Identities = 25/104 (24%), Positives = 44/104 (42%), Gaps = 12/104 (11%)

Query: 469 RVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLD------KEMNGRLGDFGLARMHGHGQ 522
           ++ K +  G+ Y+H      ++H DIK  NVL++        +  ++ D G A       
Sbjct: 135 QISKQLLLGLDYMHR--RCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNA-CWYDEH 191

Query: 523 VASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGR 566
               T  + T  Y +PEV          D++    LI E+++G 
Sbjct: 192 Y---TNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGD 232

>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group} Length = 483

 Score = 44.6 bits (105), Expect = 1e-04
 Identities = 40/154 (25%), Positives = 59/154 (38%), Gaps = 23/154 (14%)

Query: 372 IGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRG--- 428
           IG G  G++Y G       E+A+K  + +        L E         + L G  G   
Sbjct: 15  IGSGSFGEIYLGTNIQTNEEVAIKLENVKTKH--PQLLYESKIY-----RILQGGTGIPN 67

Query: 429 --WCKREKGSLMLVYDYMENG-SLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGW 485
             W   E    +LV D +  G SL+     C   + L     + +   +   V ++H   
Sbjct: 68  VRWFGVEGDYNVLVMDLL--GPSLEDLFNFCSRKLSLKTV--LMLADQMINRVEFVHS-- 121

Query: 486 EKKVLHRDIKSSNVLLDKEMNGR---LGDFGLAR 516
            K  LHRDIK  N L+          + DFGLA+
Sbjct: 122 -KSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAK 154

>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A Length = 364

 Score = 43.6 bits (103), Expect = 2e-04
 Identities = 34/175 (19%), Positives = 55/175 (31%), Gaps = 45/175 (25%)

Query: 372 IGVGGNGKVYKGVLEGG-----GAEIAVKRISHENDGGTRAF-----LAEISSLGRLKHK 421
           IG GG G +Y   +         A   VK    +N             A+   + +    
Sbjct: 43  IGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRT 102

Query: 422 SLVGLRG-----WCKREKGSL----MLVYDYMENG-SLDKWIFQCDGSM------MLSCE 465
             +   G            +      ++ D    G  L K                LS  
Sbjct: 103 RKLKYLGVPKYWGSGLHDKNGKSYRFMIMDRF--GSDLQKIYEANAKRFSRKTVLQLSLR 160

Query: 466 --ERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGR--LGDFGLAR 516
             + +           Y+HE    + +H DIK+SN+LL+ +   +  L D+GLA 
Sbjct: 161 ILDILE----------YIHE---HEYVHGDIKASNLLLNYKNPDQVYLVDYGLAY 202

>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens} Length = 352

 Score = 43.2 bits (102), Expect = 2e-04
 Identities = 26/175 (14%), Positives = 58/175 (33%), Gaps = 45/175 (25%)

Query: 372 IGVGGNGKVYKGV--------LEGGGAEIAVK------RISHENDGGTRAFLA-EISSLG 416
                 G +Y+                + ++K      R+ +E +   RA    +++   
Sbjct: 50  QTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKDGRLFNEQNFFQRAAKPLQVNKWK 109

Query: 417 RLKHKSLVG---LRGWCKREKGSLMLVYDYMENG-SLDKWIFQCDGS-------MMLSCE 465
           +L    L+      G+   +     LV   +  G SL   +             + ++C 
Sbjct: 110 KLYSTPLLAIPTCMGFGVHQDKYRFLVLPSL--GRSLQSALDVSPKHVLSERSVLQVACR 167

Query: 466 --ERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGR--LGDFGLAR 516
             + +           +LHE    + +H ++ + N+ +D E   +  L  +G A 
Sbjct: 168 LLDALE----------FLHE---NEYVHGNVTAENIFVDPEDQSQVTLAGYGFAF 209

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	705
3ujo_A	281	Legume lectin; carbohydrate-binding, galactose, ad	100.0
3ipv_A	251	Lectin alpha chain; galactose binding, SEED lectin	100.0
3zyr_A	261	Lectin; sugar binding protein, N-glycan; HET: NAG	100.0
1dbn_A	239	MAL, protein (leukoagglutinin); plant lectin, carb	100.0
1fny_A	237	BARK lectin, BARK agglutinin I,polypeptide A; legu	100.0
1v6i_A	232	Agglutinin, PNA, galactose-binding lectin; open qu	100.0
1fx5_A	242	UEA-I, UE-I, anti-H(O) lectin I; legume lectin, HO	100.0
1gzc_A	239	Erythrina crista-galli lectin; carbohydrate, sugar	100.0
2eig_A	234	Lectin; L-fucosyl, N-acetyl-D-glucosamine, SUG bin	100.0
1g7y_A	253	Stem/LEAF lectin DB58; jelly roll fold, sugar bind	100.0
1hql_A	257	Lectin; xenograft antigen, sugar BI protein; HET:	100.0
1qnw_A	242	Chitin binding lectin, UEA-II; carbohydrate bindin	100.0
2bqp_A	234	Protein (PEA lectin); D-glucopyranose complex, sug	100.0
2fmd_A	240	Lectin, agglutinin, BMA; legume lectin, beta sandw	100.0
1sbf_A	253	Soybean agglutinin; lectin; HET: NAG GAL; 2.43A {G	100.0
1fat_A	252	Phytohemagglutinin-L; glycoprotein, plant defense	100.0
1gsl_A	243	Griffonia simplicifolia lectin 4; glycoprotein, ma	100.0
1n47_A	233	Isolectin B4; cancer antigen, vicia villosa lectin	100.0
1wbf_A	242	Protein (agglutinin); lectin (agglutinin), legume	100.0
1f9k_A	238	Acidic lectin; legume lectin, glycosylated protein	100.0
1avb_A	226	Arcelin-1; lectin-like glycoprotein, plant defense	100.0
1ioa_A	240	Arcelin-5A, ARC5A; lectin-like proteins, plant def	100.0
4asz_A	299	BDNF/NT-3 growth factors receptor; transferase, TR	100.0
4aoj_A	329	High affinity nerve growth factor receptor; transf	100.0
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	100.0
4gt4_A	308	Tyrosine-protein kinase transmembrane receptor RO;	100.0
3omv_A	307	RAF proto-oncogene serine/threonine-protein kinas;	100.0
4aw0_A	311	HPDK1, 3-phosphoinositide-dependent protein kinase	100.0
4ase_A	353	Vascular endothelial growth factor receptor 2; tra	100.0
4b9d_A	350	Serine/threonine-protein kinase NEK1; transferase,	100.0
4fih_A	346	Serine/threonine-protein kinase PAK 4; kinase doma	100.0
1dhk_B	223	Bean lectin-like inhibitor, porcine pancreatic alp	100.0
3fpq_A	290	Serine/threonine-protein kinase WNK1; protein seri	100.0
4fie_A	423	Serine/threonine-protein kinase PAK 4; kinase doma	100.0
3hmm_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	100.0
3hyh_A	275	Carbon catabolite-derepressing protein kinase; kin	100.0
3ubd_A	304	Ribosomal protein S6 kinase alpha-3; kinase-inhibi	100.0
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	100.0
2ltn_A	181	PEA lectin, alpha chain; 1.70A {Pisum sativum} SCO	100.0
4b99_A	398	Mitogen-activated protein kinase 7; transferase, i	100.0
4f9c_A	361	Cell division cycle 7-related protein kinase; Ser/	100.0
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	100.0
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	100.0
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	100.0
3v5w_A	689	G-protein coupled receptor kinase 2; inhibitor com	100.0
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	100.0
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	100.0
3zgw_A	347	Maternal embryonic leucine zipper kinase; transfer	100.0
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	100.0
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	100.0
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	100.0
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	100.0
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	100.0
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	100.0
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	100.0
3soc_A	322	Activin receptor type-2A; structural genomics cons	100.0
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	100.0
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	100.0
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	100.0
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	100.0
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	100.0
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	100.0
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	100.0
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	100.0
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	100.0
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	100.0
4hcu_A	269	Tyrosine-protein kinase ITK/TSK; transferase-trans	100.0
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	100.0
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	100.0
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	100.0
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	100.0
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	100.0
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	100.0
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	100.0
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	100.0
1csn_A	298	Casein kinase-1; phosphotransferase; HET: ATP; 2.0	100.0
2izr_A	330	Casein kinase I isoform gamma-3; serine/threonine-	100.0
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	100.0
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	100.0
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	100.0
3q4u_A	301	Activin receptor type-1; structural genomics conso	100.0
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	100.0
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	100.0
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	100.0
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	100.0
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	100.0
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	100.0
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	100.0
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	100.0
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	100.0
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	100.0
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	100.0
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	100.0
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	100.0
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	100.0
3op5_A	364	Serine/threonine-protein kinase VRK1; adenosine tr	100.0
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	100.0
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	100.0
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	100.0
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	100.0
3o0g_A	292	Cell division protein kinase 5; kinase activator c	100.0
3uzp_A	296	CKI-delta, CKID, casein kinase I isoform delta; CK	100.0
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	100.0
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	100.0
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	100.0
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	100.0
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	100.0
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	100.0
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	100.0
4hgt_A	296	Casein kinase I isoform delta; CK1D, inhibitor, tr	100.0
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	100.0
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	100.0
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	100.0
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	100.0
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	100.0
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	100.0
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	100.0
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	100.0
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	100.0
3ork_A	311	Serine/threonine protein kinase; structural genomi	100.0
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	100.0
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	100.0
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	100.0
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	100.0
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	100.0
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	100.0
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	100.0
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	100.0
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	100.0
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	100.0
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	100.0
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	100.0
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	100.0
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	100.0
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	100.0
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	100.0
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	100.0
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	100.0
3pls_A	298	Macrophage-stimulating protein receptor; protein k	100.0
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	100.0
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	100.0
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	100.0
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	100.0
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	100.0
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	100.0
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	100.0
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	100.0
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	100.0
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	100.0
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	100.0
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	100.0
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	100.0
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	100.0
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	100.0
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	100.0
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	100.0
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	100.0
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	100.0
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	100.0
3niz_A	311	Rhodanese family protein; structural genomics, str	100.0
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	100.0
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	100.0
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	100.0
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	100.0
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	100.0
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	100.0
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	100.0
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	100.0
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	100.0
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	100.0
2v62_A	345	Serine/threonine-protein kinase VRK2; transferase,	100.0
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	100.0
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	100.0
3sv0_A	483	Casein kinase I-like; typical kinase domain fold,	100.0
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	100.0
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	100.0
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	100.0
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	100.0
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	100.0
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	100.0
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	100.0
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	100.0
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	100.0
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	100.0
3rp9_A	458	Mitogen-activated protein kinase; structural genom	100.0
4fl3_A	635	Tyrosine-protein kinase SYK; transferase; HET: ANP	100.0
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	100.0
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	100.0
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	100.0
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	100.0
3bhy_A	283	Death-associated protein kinase 3; death associate	100.0
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	100.0
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	100.0
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	100.0
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	100.0
2jii_A	352	Serine/threonine-protein kinase VRK3 molecule: VA	100.0
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	100.0
2a19_B	284	Interferon-induced, double-stranded RNA-activated	100.0
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	100.0
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	100.0
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	100.0
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	100.0
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	100.0
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	100.0
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	100.0
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	100.0
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	100.0
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	100.0
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	100.0
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	100.0
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	100.0
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	100.0
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	100.0
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	100.0
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	100.0
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	100.0
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	100.0
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	100.0
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	100.0
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	100.0
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	100.0
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	100.0
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	100.0
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	100.0
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	100.0
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	100.0
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	100.0
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	100.0
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	100.0
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	100.0
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	100.0
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	100.0
3fme_A	290	Dual specificity mitogen-activated protein kinase;	100.0
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	100.0
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	100.0
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	100.0
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	100.0
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	100.0
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	100.0
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	100.0
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	100.0
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	100.0
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	100.0
3an0_A	340	Dual specificity mitogen-activated protein kinase;	100.0
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	100.0
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	100.0
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	100.0
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	100.0
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	100.0
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	100.0
4exu_A	371	Mitogen-activated protein kinase 13; P38 kinase, t	100.0
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	100.0
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	100.0
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	100.0
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	100.0
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	100.0
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	100.0
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	100.0
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	100.0
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	100.0
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	100.0
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	100.0
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	100.0
3aln_A	327	Dual specificity mitogen-activated protein kinase;	100.0
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	100.0
2dyl_A	318	Dual specificity mitogen-activated protein kinase	100.0
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	100.0
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	100.0
2dur_A	253	VIP36;, vesicular integral-membrane protein VIP36;	100.0
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	100.0
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	100.0
1gv9_A	260	P58/ergic-53; lectin, carbohydrate binding; 1.46A	100.0
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	100.0
3uqc_A	286	Probable conserved transmembrane protein; structur	100.0
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	100.0
1qmo_E	133	Mannose binding lectin, FRIL; crosslink, hematopoi	100.0
2vuw_A	336	Serine/threonine-protein kinase haspin; cell cycle	100.0
1nls_A	237	Concanavalin A; lectin, agglutinin; 0.94A {Canaval	99.97
1qmo_A	113	Mannose binding lectin, FRIL; crosslink, hematopoi	99.96
4azs_A	569	Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15	99.95
2a6y_A	256	EMP47P (FORM1); beta sandwich, carbohydrate bindin	99.92
3en9_A	540	Glycoprotease, O-sialoglycoprotein endopeptidase/p	99.92
1nls_A	237	Concanavalin A; lectin, agglutinin; 0.94A {Canaval	99.91
1zar_A	282	RIO2 kinase; serine kinase, winged-helix, RIO doma	99.86
1zth_A	258	RIO1 serine protein kinase; ribosome biogenesis, r	99.77
2a6z_A	222	EMP47P (FORM2); beta sandwich, carbohydrate bindin	99.75
4gyi_A	397	RIO2 kinase; protein kinase, ADP complex, phosphoa	99.59
2a6v_A	226	EMP46P; beta sandwich, carbohydrate binding protei	99.48
2ltn_B	52	PEA lectin, beta chain; 1.70A {Pisum sativum} SCOP	99.4
3tm0_A	263	Aminoglycoside 3'-phosphotransferase; protein kina	99.15
1nd4_A	264	Aminoglycoside 3'-phosphotransferase; protein kina	98.92
3dxp_A	359	Putative acyl-COA dehydrogenase; protein kinase-li	98.84
3sg8_A	304	APH(2'')-ID; antibiotic resistance enzyme, transfe	98.7
3r70_A	320	Aminoglycoside phosphotransferase; structural geno	98.46
3tdw_A	306	Gentamicin resistance protein; kinase, phosphoryl	98.3
4gkh_A	272	Aminoglycoside 3'-phosphotransferase APHA1-IAB; py	98.26
3d1u_A	288	Putative fructosamine-3-kinase; YP_290396.1, struc	98.19
3ovc_A	362	Hygromycin-B 4-O-kinase; aminoglycoside phosphotra	98.05
3ats_A	357	Putative uncharacterized protein; hypothetical pro	97.84
2olc_A	397	MTR kinase, methylthioribose kinase; kinase ADP-2H	97.8
2q83_A	346	YTAA protein; 2635576, structural genomics, joint	97.68
3f7w_A	288	Putative fructosamine-3-kinase; YP_290396.1, struc	97.24
3jr1_A	312	Putative fructosamine-3-kinase; YP_719053.1, struc	97.14
2pyw_A	420	Uncharacterized protein; 5-methylthioribose kinase	96.99
2ppq_A	322	HSK, HK, homoserine kinase; structural genomics, M	96.72
3dxq_A	301	Choline/ethanolamine kinase family protein; NP_106	96.58
1nw1_A	429	Choline kinase (49.2 KD); phospholipid synthesis,	96.53
1zyl_A	328	Hypothetical protein YIHE; putative protein kinase	96.36
3feg_A	379	Choline/ethanolamine kinase; non-protein kinase, c	96.33
2qg7_A	458	Ethanolamine kinase PV091845; malaria, SGC, struct	96.3
3csv_A	333	Aminoglycoside phosphotransferase; YP_614837.1, ph	95.98
3c5i_A	369	Choline kinase; choline, kinase, malaria, transfer	95.58
3i1a_A	339	Spectinomycin phosphotransferase; protein kinase,	95.04
3f2s_A	401	CK, chetk-alpha, choline kinase alpha; non-protein	94.84
2yle_A	229	Protein spire homolog 1; actin-binding protein, ac	94.5
3mes_A	424	Choline kinase; malaria, structural genomics, stru	92.88
3g15_A	401	CK, chetk-alpha, choline kinase alpha; non-protein	89.14
2ks1_B	44	Epidermal growth factor receptor; ERBB1, ERBB2, tr	83.96
2l2t_A	44	Receptor tyrosine-protein kinase ERBB-4; transmemb	81.61
3niz_A	311	Rhodanese family protein; structural genomics, str	81.12
3cxl_A	463	N-chimerin; SH2, RHO-GAP, structural genomics cons	81.11

>3ujo_A Legume lectin; carbohydrate-binding, galactose, adenine binding protein; HET: ADE GAL; 2.00A {Dolichos lablab} PDB: 3ujq_A* 3uk9_A* 3ul2_A* 1fat_A* 1g8w_A*

Probab=100.00  E-value=1.7e-62  Score=499.85  Aligned_cols=225  Identities=34%  Similarity=0.551  Sum_probs=201.9

Q ss_pred             hccCceeeEEeCCCCCCCeEEEcceEeecCcEEecCCCCC------eEEEEEcCCCccccCCCCCcccceEEEEEEEEec
Q 005257           20 FESISAVDFVFNGFNSSNLSLYGTATVESRILTLTNSTTF------TIGRALYPSKIPTKRPNSSYVYPFSTSFIFAMAP   93 (705)
Q Consensus        20 ~~~~~~~~f~f~~f~~~~~~~~g~a~~~~~~l~lt~~~~~------~~Gr~~y~~pv~l~~~~~~~~~sF~t~F~f~i~~   93 (705)
                      +.++..++|+|++|+..||+|+|||++.+|.||||+...+      ++|||+|++||+|||+.+|+++||+|+|+|.|.+
T Consensus        21 ~~sa~~~sF~f~~F~~~nL~l~GdA~i~~g~L~LT~~~~~~~p~~~s~Gra~Y~~Pi~l~d~~tg~vaSFsTsFsF~I~~  100 (281)
T 3ujo_A           21 AASANLISFTFKKFNETNLILQRDATVSSGKLRITKAAENGVPTAGSLGRAFYSTPIQIWDNTTGTVASWATSFTFNLQA  100 (281)
T ss_dssp             ---CEEEEEEESSCCSTTEEECSSCCCBTTBEECSCCCSSCCCCSSCEEEEEESSCEECBCSSSCCBEEEEEEEEEECCC
T ss_pred             cCcCCcceEEcCCCCccCEEEecceEEeCCEEEeCCCCCCCcccCCceEEEEECCCEEcccCCCCCceeEEEEEEEEEec
Confidence            4456789999999999999999999999999999998765      9999999999999999999999999999999998


Q ss_pred             CCCCCCCCceEEEEeeCCCCCCCCCCCcccccccCCCCCCCCcEEEEEeecccCCCCCCCCCCeeEEecCCCcccccccc
Q 005257           94 YKGVLAGHGLVFLFVPFHGIKGATEAQHLGLFNRTNDGNSSNHVFGVEFDVFKNQEFNDIDENHVGIDVNSLTSVSAHAA  173 (705)
Q Consensus        94 ~~~~~~g~G~aF~~~~~~~~~~~~~g~~lGl~~~~~~~~~~~~~vaVEFDt~~n~~~~d~~~~Hvgidvns~~S~~~~~~  173 (705)
                      ++...+||||||||+|....|. +.||||||||.+++ ++++|+|||||||++|++| ||++|||||||||++|+++++ 
T Consensus       101 ~~~~~~gdGlAF~laP~~~~p~-~~gg~LGL~n~~~~-~~~n~~vAVEFDT~~N~e~-Dp~~nHVGIDvNSi~S~~t~~-  176 (281)
T 3ujo_A          101 PNAASPADGLAFALVPVGSQPK-DKGGFLGLFDSKNY-ASSNQTVAVEFDTFYNGGW-DPTERHIGIDVNSIKSIKTTS-  176 (281)
T ss_dssp             SSTTSCCEEEEEEEEETTCCCC-CCGGGTTTCSCSSC-CTTSCCEEEEECCSCCCSS-CCSSSEEEEEESSSCCSCEEE-
T ss_pred             CCCCCCCCceEEEEecCCCCCC-CCcceeeeccccCC-CccCcEEEEEEeccccccC-CCCCCeEEEEcCCCCcccccc-
Confidence            8777899999999999876654 68999999998776 7889999999999999987 999999999999999988743 


Q ss_pred             cccCCCCCCCCCCCCCCCCCCCccccceeecCCCcceEEEEEe--cCceEEEEEEEccCCCCCCCceeeeecCccccccc
Q 005257          174 GYWPDNQTDSSGSNSNSGTGDDEKSFKELKLNNGKNYQVWIDY--ADSFINITMVEAGMKRPKRPLLSVPLNLSGVLEDE  251 (705)
Q Consensus       174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~I~Y--~~~~~~v~~~~~~~~~~~~~~ls~~vdl~~~l~~~  251 (705)
                                                  +.+.+|+.++|||+|  ..++|+|++++.+.  |+.|+|++.|||+++|||+
T Consensus       177 ----------------------------~~l~~G~~~~vwI~Yd~~tk~L~V~l~~~~~--~~~~~lS~~vDL~~~L~e~  226 (281)
T 3ujo_A          177 ----------------------------WDFANGENAEVLITYDSSTNLLVASLVHPSQ--KTSFIVSERVDLTSVLPEW  226 (281)
T ss_dssp             ----------------------------CCCCSSCCEEEEEEECTTTCEEEEEEECTTT--CCCEEEEEECCSTTTSCSE
T ss_pred             ----------------------------ccccCCCEEEEEEEEeCCCCEEEEEEecCCC--CCCceEEEEechHHhccCc
Confidence                                        356799999999999  56788998887553  5678999999999999999


Q ss_pred             eeccccccccc---ccccceeeeeeecccc
Q 005257          252 MYVGFTAATGQ---LVESHKILAWSFSNTK  278 (705)
Q Consensus       252 ~~vGfsastg~---~~~~h~i~~wsf~~~~  278 (705)
                      ||||||||||.   ..|.|+|++|+|++..
T Consensus       227 v~VGFSAsTG~~~~~~e~H~IlsWSFss~l  256 (281)
T 3ujo_A          227 VSVGFSATTGLSKGYVETNEVLSWSFASKL  256 (281)
T ss_dssp             EEEEEEEEECSSTTSCCCCEEEEEEEEEEE
T ss_pred             EEEEEEeecCCCCcccceeEEEEEEEEEEc
Confidence            99999999996   5899999999999875

>3ipv_A Lectin alpha chain; galactose binding, SEED lectin, hemagglutinin, legume lectin fungal, sugar binding protein; 2.04A {Spatholobus parviflorus} PDB: 3ipv_B 3usu_B* 3usu_A*

Probab=100.00  E-value=3.2e-61  Score=485.50  Aligned_cols=222  Identities=33%  Similarity=0.532  Sum_probs=201.5

Q ss_pred             ceeeEEeCCCC--CCCeEEEcceEee-cCcEEecCCCCC------eEEEEEcCCCccccCCCCCcccceEEEEEEEEecC
Q 005257           24 SAVDFVFNGFN--SSNLSLYGTATVE-SRILTLTNSTTF------TIGRALYPSKIPTKRPNSSYVYPFSTSFIFAMAPY   94 (705)
Q Consensus        24 ~~~~f~f~~f~--~~~~~~~g~a~~~-~~~l~lt~~~~~------~~Gr~~y~~pv~l~~~~~~~~~sF~t~F~f~i~~~   94 (705)
                      ..++|+|++|+  ..||+|+|||++. +|.||||+...+      ++|||+|++||+|||+.+|++|||+|+|+|.|.++
T Consensus         2 ~~~sF~f~~F~~~~~nl~l~GdA~v~~~g~L~LT~~~~~~~~~~~s~Gra~Y~~Pi~l~d~~tg~vaSFsT~F~F~I~~~   81 (251)
T 3ipv_A            2 EETSFVFSKFKPLEPNLILQGDALVTVAGVLQLTNVDKNGVPEPSSLGRATYSAPINIWDSATGLVASFATSFRFTIYAP   81 (251)
T ss_dssp             EEEEEEESSCCSSCTTEEEEETCEECTTSCEESSCBCTTSCBCSSCEEEEEESSCEECBCTTTCCBCEEEEEEEEECCCS
T ss_pred             cceEEEeCCCCCCCCCeEEeccEEecCCCeEEcCCCCCCCcccCCcEEEEEECCCEEeecCCCCceeeEEEEEEEEEeCC
Confidence            46899999998  6899999999994 899999998765      99999999999999999999999999999999988


Q ss_pred             CCCCCCCceEEEEeeCCCCCCCCCCCcccccccCCCCCCCCcEEEEEeecccCCCCCCCCCCeeEEecCCCccccccccc
Q 005257           95 KGVLAGHGLVFLFVPFHGIKGATEAQHLGLFNRTNDGNSSNHVFGVEFDVFKNQEFNDIDENHVGIDVNSLTSVSAHAAG  174 (705)
Q Consensus        95 ~~~~~g~G~aF~~~~~~~~~~~~~g~~lGl~~~~~~~~~~~~~vaVEFDt~~n~~~~d~~~~Hvgidvns~~S~~~~~~~  174 (705)
                      +...+||||||||+|....|. ..||||||||.+++ +.++|+|||||||++|.+|+||++|||||||||++|+++++  
T Consensus        82 ~~~~~gdGlAF~lap~~~~~~-~~gg~LGL~n~~~~-~~~n~~vAVEFDT~~n~~~~Dp~~nHVGIdvNsi~S~~t~~--  157 (251)
T 3ipv_A           82 NIATIADGLAFFLAPVASAPD-SGGGFLGLFDSAVS-GSTYQTVAVEFDTYENTVFTDPPYTHIGFDVNSISSIKTVK--  157 (251)
T ss_dssp             STTSCCEEEEEEEEETTCCCC-CCGGGTTTCSSSSC-CTTSCCEEEEEECSCCGGGTCCSSCEEEEEESSSSCSEEEE--
T ss_pred             CCCCCCCceEEEEecCCCCCC-CCCceeeeccccCC-CccCcEEEEEEecccccccCCCCCCeEEEEcCCCcccccce--
Confidence            777899999999999876655 57999999998766 77899999999999999988999999999999999988743  


Q ss_pred             ccCCCCCCCCCCCCCCCCCCCccccceeecCCCcceEEEEEe--cCceEEEEEEEccCCCCCCCceeeeecCccccccce
Q 005257          175 YWPDNQTDSSGSNSNSGTGDDEKSFKELKLNNGKNYQVWIDY--ADSFINITMVEAGMKRPKRPLLSVPLNLSGVLEDEM  252 (705)
Q Consensus       175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~I~Y--~~~~~~v~~~~~~~~~~~~~~ls~~vdl~~~l~~~~  252 (705)
                                                 +.+.+|+.++|||+|  ..+.|+|+|+..+.  |..|+|++.|||+++|||+|
T Consensus       158 ---------------------------~~l~~G~~~~v~I~Yd~~tk~L~V~l~~~~~--~~~~~ls~~vdL~~~l~e~v  208 (251)
T 3ipv_A          158 ---------------------------WSLANGEAAKVLITYNSAVKLLVASLVYPSS--KTSFILADIVDLSSVLPEWV  208 (251)
T ss_dssp             ---------------------------CCCCTTCEEEEEEEEETTTTEEEEEEECTTT--CCEEEEEEECCHHHHSCSEE
T ss_pred             ---------------------------eEecCCCEEEEEEEEeCCCCEEEEEEecCCC--CccceEEEEechHHhCCCcE
Confidence                                       357899999999999  56799999986543  66789999999999999999


Q ss_pred             ecccccccccc---cccceeeeeeecccc
Q 005257          253 YVGFTAATGQL---VESHKILAWSFSNTK  278 (705)
Q Consensus       253 ~vGfsastg~~---~~~h~i~~wsf~~~~  278 (705)
                      |||||||||..   .|.|+|++|+|++..
T Consensus       209 ~VGFSAsTG~~~~~~e~h~IlsWsF~s~l  237 (251)
T 3ipv_A          209 RVGFSAATGASGGKIETHDVFSWSFASKL  237 (251)
T ss_dssp             EEEEEEEECSSTTCCCCCEEEEEEEEEEE
T ss_pred             EEEEEEecCCCccccceeEEEEEEEEEEC
Confidence            99999999988   899999999999875

>3zyr_A Lectin; sugar binding protein, N-glycan; HET: NAG BMA MAN GOL; 1.65A {Platypodium elegans} SCOP: b.29.1.1 PDB: 3zvx_A* 1ukg_A* 1q8o_A* 1q8q_A* 1q8s_A* 1q8v_A* 1q8p_A* 2auy_A* 2gme_A 2gmm_A* 2gmp_A* 2gn3_A* 2gn7_A* 2gnb_A* 2gnd_A* 2gnm_A* 2gnt_A 2phf_A* 2phr_A* 2pht_A* ...

Probab=100.00  E-value=1.4e-60  Score=482.16  Aligned_cols=225  Identities=30%  Similarity=0.488  Sum_probs=201.6

Q ss_pred             hccCceeeEEeCCCC--CCCeEEEcceEe-ecCcEEecCCCC------CeEEEEEcCCCccccCCCCCcccceEEEEEEE
Q 005257           20 FESISAVDFVFNGFN--SSNLSLYGTATV-ESRILTLTNSTT------FTIGRALYPSKIPTKRPNSSYVYPFSTSFIFA   90 (705)
Q Consensus        20 ~~~~~~~~f~f~~f~--~~~~~~~g~a~~-~~~~l~lt~~~~------~~~Gr~~y~~pv~l~~~~~~~~~sF~t~F~f~   90 (705)
                      +.++..++|+|++|+  ..||+|+|||++ .+|.|+||+...      +++|||+|++||+|||+.+|++|||+|+|+|.
T Consensus         6 ~~sa~~~sF~f~~F~~~~~~l~l~GdA~i~~~g~L~LT~~~~~~~~~~~s~Gra~Y~~Pv~l~d~~tg~vaSFsT~F~F~   85 (261)
T 3zyr_A            6 ANSTDSLSFSFINFDRDERNLIFQGDAHTSRNNILQLTRTDSNGAPVRSTVGRILHSAQVRLWEKSTNRVANLQTQFSFF   85 (261)
T ss_dssp             --CCEEEEEEESSCCSCCTTEEEEETCEECTTSCEECSCBCTTSCBCSSEEEEEEESSCEECBCTTTCCBEEEEEEEEEE
T ss_pred             cCcCcccEEEcCCCCCCCCCeEEeccEEecCCCeEEeCCCCCCCccccCCEEEEEECCCEEeecCCCCCceeEEEEEEEE
Confidence            456778999999998  689999999999 489999999875      79999999999999999999999999999999


Q ss_pred             EecCCCCCCCCceEEEEeeCCC-CCCCCCCCcccccccCCCCC-CCCcEEEEEeecc---cCCCCCCCCCCeeEEecCCC
Q 005257           91 MAPYKGVLAGHGLVFLFVPFHG-IKGATEAQHLGLFNRTNDGN-SSNHVFGVEFDVF---KNQEFNDIDENHVGIDVNSL  165 (705)
Q Consensus        91 i~~~~~~~~g~G~aF~~~~~~~-~~~~~~g~~lGl~~~~~~~~-~~~~~vaVEFDt~---~n~~~~d~~~~Hvgidvns~  165 (705)
                      |.++ ...+||||||||+|.+. +|.+++||||||||.+++++ +.||+|||||||+   +|.+| ||++|||||||||+
T Consensus        86 I~~~-~~~~gdGlAF~lap~~~~~p~~~~g~~LGL~n~~~~g~~~~n~~vAVEFDT~~~~~n~~~-Dp~~nHVGIdvNsi  163 (261)
T 3zyr_A           86 LSSP-LSNPADGIAFFIAPPDTTIPSGSAGGLLGLFNPRTALNESANQVLAVEFDTFFAQNSNTW-DPNYQHIGIDVNSI  163 (261)
T ss_dssp             EECS-SSSCCCEEEEEEECTTCCCCTTCCGGGTTTCCTTTTTCGGGCCCEEEEEECCCCTTTCTT-SCSSCEEEEEESSS
T ss_pred             EecC-CCCCCccEEEEEccCCCCCCCCCCCceeeeecccccCCCccCcEEEEEEeccccccCcCC-CCCCCeEEEEcCCC
Confidence            9887 66789999999999865 58889999999999887644 5789999999999   99887 99999999999999


Q ss_pred             cccccccccccCCCCCCCCCCCCCCCCCCCccccceeecCCCcceEEEEEe--cCceEEEEEEEccCCCCCCCceeeeec
Q 005257          166 TSVSAHAAGYWPDNQTDSSGSNSNSGTGDDEKSFKELKLNNGKNYQVWIDY--ADSFINITMVEAGMKRPKRPLLSVPLN  243 (705)
Q Consensus       166 ~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~I~Y--~~~~~~v~~~~~~~~~~~~~~ls~~vd  243 (705)
                      .|+++++                             +.+.+|+.++|||+|  ..++|+|++++.+.   ..|+|++.||
T Consensus       164 ~S~~s~~-----------------------------~~l~~G~~~~v~I~Yd~~~~~L~V~l~~~~~---~~~~ls~~vd  211 (261)
T 3zyr_A          164 RSSKVVR-----------------------------WERREGKTLNVLVTYNPSTRTIDVVATYPDG---QRYQLSHVVD  211 (261)
T ss_dssp             SCSEEEE-----------------------------CCCCTTCCEEEEEEEETTTTEEEEEEECTTC---CEEEEEEECC
T ss_pred             Ccccccc-----------------------------ccccCCceEEEEEEEcCCCCEEEEEEEcCCC---CCeEEEEEec
Confidence            9988743                             356799999999999  56899999987552   3789999999


Q ss_pred             Cccccccceecccccccccccccceeeeeeecccc
Q 005257          244 LSGVLEDEMYVGFTAATGQLVESHKILAWSFSNTK  278 (705)
Q Consensus       244 l~~~l~~~~~vGfsastg~~~~~h~i~~wsf~~~~  278 (705)
                      |+++|||+||||||||||...|.|+|++|+|++..
T Consensus       212 L~~~l~e~v~VGFSAsTG~~~e~h~IlsWsF~s~l  246 (261)
T 3zyr_A          212 LTTILPEWVRVGFSAASGEQFQTHNLESWSFTSTL  246 (261)
T ss_dssp             GGGTSCSEEEEEEEEEESSSCCEEEEEEEEEEEEE
T ss_pred             hHHhCcCcEEEEEEecCCCccceEEEEEEEEEEEc
Confidence            99999999999999999999999999999999875

>1dbn_A MAL, protein (leukoagglutinin); plant lectin, carbohydrate binding, sialyllactose, sugar BIN protein; HET: NAG SIA GAL BGC; 2.75A {Maackia amurensis} SCOP: b.29.1.1

Probab=100.00  E-value=2.8e-59  Score=470.87  Aligned_cols=221  Identities=32%  Similarity=0.523  Sum_probs=199.9

Q ss_pred             ceeeEEeCCCC--CCCeEEEcceEee-cCcEEecCCC-----CCeEEEEEcCCCccccCCCCCcccceEEEEEEEEecCC
Q 005257           24 SAVDFVFNGFN--SSNLSLYGTATVE-SRILTLTNST-----TFTIGRALYPSKIPTKRPNSSYVYPFSTSFIFAMAPYK   95 (705)
Q Consensus        24 ~~~~f~f~~f~--~~~~~~~g~a~~~-~~~l~lt~~~-----~~~~Gr~~y~~pv~l~~~~~~~~~sF~t~F~f~i~~~~   95 (705)
                      ..++|+|++|+  ..||+|+|||.+. +|.|+||++.     .+++|||+|++||+|||+.+|+++||+|+|+|.|.+++
T Consensus         2 ~~~~F~f~~F~~~~~~l~l~G~A~v~~~g~l~LT~~~~~~~~~~~~Gra~y~~Pi~l~~~~tg~vaSFsT~F~F~I~~~~   81 (239)
T 1dbn_A            2 DELSFTINNFVPNEADLLFQGEASVSSTGVLQLTKVENGQPQKYSVGRALYAAPVRIWGNTTGSVASFSTSFTFVVKAPN   81 (239)
T ss_dssp             CEEEEEESSCCTTCTTEEEEETCEECTTSCEESSCEETTEECSSCEEEEEESSCEECBCTTTCCBCEEEEEEEEECCCSS
T ss_pred             cceEEEcCCCCCCCCCeEEcccEEecCCCcEEeCCCCCCCcccCceEEEEeCCCEecccCCCCCccceEEEEEEEEeCCC
Confidence            46899999998  5899999999996 7999999876     68999999999999999999999999999999999887


Q ss_pred             CCCCCCceEEEEeeCCC-CCCCCCCCcccccccCCCCCCCCcEEEEEeecccC---CCCCCCCCCeeEEecCCCcccccc
Q 005257           96 GVLAGHGLVFLFVPFHG-IKGATEAQHLGLFNRTNDGNSSNHVFGVEFDVFKN---QEFNDIDENHVGIDVNSLTSVSAH  171 (705)
Q Consensus        96 ~~~~g~G~aF~~~~~~~-~~~~~~g~~lGl~~~~~~~~~~~~~vaVEFDt~~n---~~~~d~~~~Hvgidvns~~S~~~~  171 (705)
                      ...+||||||||+|... +|.++.||||||+|.++ ++..+|+|||||||++|   .+ +||++|||||||||++|++++
T Consensus        82 ~~~~gdGlAF~l~p~~~~~p~~~~g~~LGl~n~~~-~~~~~~~vAVEFDT~~n~~~~~-~Dp~~nHVGIdvNs~~S~~~~  159 (239)
T 1dbn_A           82 PDITSDGLAFYLAPPDSQIPSGSVSKYLGLFNNSN-SDSSNQIVAVEFDTYFAHSYDP-WDPNYRHIGIDVNGIESIKTV  159 (239)
T ss_dssp             TTSCCEEEEEEEECTTCCCCSSSCGGGTTSCSSSC-CCTTSCCEEEEEECCCCTTTCT-TSCSSCEEEEEESSSSCSEEE
T ss_pred             CCCCCCCEEEEEecCCCCCCcCCCCCcccccccCC-CCccccEEEEEEeccccCcccc-cCCCCCcEEEecCCccccceE
Confidence            77789999999999865 68889999999999764 47799999999999999   88 599999999999999998874


Q ss_pred             cccccCCCCCCCCCCCCCCCCCCCccccceeecCCCcceEEEEEe--cCceEEEEEEEccCCCCCCCceeeeecCccccc
Q 005257          172 AAGYWPDNQTDSSGSNSNSGTGDDEKSFKELKLNNGKNYQVWIDY--ADSFINITMVEAGMKRPKRPLLSVPLNLSGVLE  249 (705)
Q Consensus       172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~I~Y--~~~~~~v~~~~~~~~~~~~~~ls~~vdl~~~l~  249 (705)
                      +                             ++|.+|+.++|||+|  ..++|+|+|++.+.  |..|+|+..|||+++||
T Consensus       160 ~-----------------------------~~l~~g~~~~v~I~Yd~~~~~L~V~l~~~~~--~~~~~ls~~vdL~~~l~  208 (239)
T 1dbn_A          160 Q-----------------------------WDWINGGVAFATITYLAPNKTLIASLVYPSN--QTTFSVAASVDLKEILP  208 (239)
T ss_dssp             E-----------------------------CCCCTTCCEEEEEEEEGGGTEEEEEEEETTT--TEEEEEEEECCHHHHSC
T ss_pred             c-----------------------------ccccCCCEEEEEEEEeCCCcEEEEEEccCCC--CCcceEEEEechHHhCC
Confidence            3                             358899999999999  55789999987643  56789999999999999


Q ss_pred             cceecccccccccc--cccceeeeeeeccc
Q 005257          250 DEMYVGFTAATGQL--VESHKILAWSFSNT  277 (705)
Q Consensus       250 ~~~~vGfsastg~~--~~~h~i~~wsf~~~  277 (705)
                      |+||||||||||..  .|.|+|++|+|+++
T Consensus       209 e~v~VGFSAsTG~~~~~~~h~IlsWsF~s~  238 (239)
T 1dbn_A          209 EWVRVGFSAATGYPTEVETHDVLSWSFTST  238 (239)
T ss_dssp             SEEEEEEEEEECSGGGCCCCEEEEEEEEEE
T ss_pred             ccEEEEEEeccCCCccceeeEEEEEEeEec
Confidence            99999999999998  99999999999864

>1fny_A BARK lectin, BARK agglutinin I,polypeptide A; legume lectin, jelly roll, sugar binding protein; 1.81A {Robinia pseudoacacia} SCOP: b.29.1.1 PDB: 1fnz_A*

Probab=100.00  E-value=4.9e-59  Score=467.95  Aligned_cols=219  Identities=29%  Similarity=0.475  Sum_probs=196.1

Q ss_pred             eeeEEeCCCC--CCCeEEEcceEee-cCcEEecCCC-----CCeEEEEEcCCCccccCCCCCcccceEEEEEEEEecCCC
Q 005257           25 AVDFVFNGFN--SSNLSLYGTATVE-SRILTLTNST-----TFTIGRALYPSKIPTKRPNSSYVYPFSTSFIFAMAPYKG   96 (705)
Q Consensus        25 ~~~f~f~~f~--~~~~~~~g~a~~~-~~~l~lt~~~-----~~~~Gr~~y~~pv~l~~~~~~~~~sF~t~F~f~i~~~~~   96 (705)
                      .++|+|++|+  ..||+|+|||.+. +|.|+||++.     .+++|||+|++||+|||+.+|+++||+|+|+|.|.+++.
T Consensus         3 ~~~F~f~~F~~~~~~l~l~G~A~v~~~g~l~LT~~~~~~~~~~~~Gra~y~~Pi~l~d~~tg~vaSFsT~F~F~I~~~~~   82 (237)
T 1fny_A            3 SLSFSFPKFAPNQPYLINQGDALVTSTGVLQLTNVVNGVPSSKSLGRALYAAPFQIWDSTTGNVASFVTSFTFIIQAPNP   82 (237)
T ss_dssp             EEEEEESSCCTTCTTEEEEETCEECTTSCEECSCEETTEECSSCEEEEEESSCEECBCTTTCCBCEEEEEEEEECCCSST
T ss_pred             ceEEEcCCCCCCCCCeEEcccEEeccCCeEEecCCcCCCcccCceEEEEeCCCEecccCCCCCccceEEEEEEEEeCCCC
Confidence            5799999998  5899999999996 7999999876     689999999999999999999999999999999998877


Q ss_pred             CCCCCceEEEEeeCCCCCCCCCCCcccccccCCCCCCCCcEEEEEeecccCCCCCCCCCCeeEEecCCCccccccccccc
Q 005257           97 VLAGHGLVFLFVPFHGIKGATEAQHLGLFNRTNDGNSSNHVFGVEFDVFKNQEFNDIDENHVGIDVNSLTSVSAHAAGYW  176 (705)
Q Consensus        97 ~~~g~G~aF~~~~~~~~~~~~~g~~lGl~~~~~~~~~~~~~vaVEFDt~~n~~~~d~~~~Hvgidvns~~S~~~~~~~~~  176 (705)
                      ..+||||||||+|....| ++.||||||||.++ ++..+|+|||||||++|.+ +||++|||||||||+.|+++++    
T Consensus        83 ~~~gdGlAF~l~p~~~~~-~~~g~~LGl~n~~~-~~~~~~~vAVEFDT~~n~~-~Dp~~nHVGIdvNsi~S~~~~~----  155 (237)
T 1fny_A           83 ATTADGLAFFLAPVDTQP-LDLGGMLGIFKDGY-FNKSNQIVAVEFDTFSNGD-WDPKGRHLGINVNSIESIKTVP----  155 (237)
T ss_dssp             TSCCEEEEEEEEETTCCC-CCCGGGTTTCC----CCTTSCCEEEEEECSCCTT-TCCSSSEEEEEESSSSCSEEEE----
T ss_pred             CCCCCCEEEEeccCCCCC-CCCCCcccccccCC-CCccccEEEEEeecccCcc-cCCCCCceEEecCCcccccccc----
Confidence            778999999999986655 48899999999764 4789999999999999998 5999999999999999988743    


Q ss_pred             CCCCCCCCCCCCCCCCCCCccccceeecCCCcceEEEEEe--cCceEEEEEEEccCCCCCCCceeeeecCccccccceec
Q 005257          177 PDNQTDSSGSNSNSGTGDDEKSFKELKLNNGKNYQVWIDY--ADSFINITMVEAGMKRPKRPLLSVPLNLSGVLEDEMYV  254 (705)
Q Consensus       177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~I~Y--~~~~~~v~~~~~~~~~~~~~~ls~~vdl~~~l~~~~~v  254 (705)
                                               ++|.+|+.++|||+|  ..+.|+|+|++.+  .|..|+|+..|||+++|||+|||
T Consensus       156 -------------------------~~l~~G~~~~v~I~Yd~~~~~L~V~l~~~~--~~~~~~ls~~vdL~~~l~e~v~V  208 (237)
T 1fny_A          156 -------------------------WNWTNGEVANVFISYEASTKSLTASLVYPS--LETSFIIDAIVDVKIVLPEWVRF  208 (237)
T ss_dssp             -------------------------CCCCTTCCEEEEEEEEGGGTEEEEEEEETT--TTEEEEEEEECCHHHHSCSEEEE
T ss_pred             -------------------------ccccCCCEEEEEEEEeCCCcEEEEEEecCC--CCCcceEEEEechHHhCCCcEEE
Confidence                                     358899999999999  5568999998754  36678999999999999999999


Q ss_pred             ccccccccc---cccceeeeeeeccc
Q 005257          255 GFTAATGQL---VESHKILAWSFSNT  277 (705)
Q Consensus       255 Gfsastg~~---~~~h~i~~wsf~~~  277 (705)
                      |||||||..   .|.|+|++|+|+++
T Consensus       209 GFSAsTG~~~~~~~~h~IlsWsF~s~  234 (237)
T 1fny_A          209 GFSATTGIDKGYVQTNDVLSWSFESN  234 (237)
T ss_dssp             EEEEEECSSTTCCCCCEEEEEEEEEE
T ss_pred             EEEEeeCCCCcccceeEEEEEEEEEe
Confidence            999999998   99999999999875

>1v6i_A Agglutinin, PNA, galactose-binding lectin; open quaternary association, orthorhombic, carbohydrate specificity, protein crystallography; HET: GAL GLC; 2.15A {Arachis hypogaea} SCOP: b.29.1.1 PDB: 1bzw_A* 1v6j_A* 1v6k_A* 1v6l_A* 1v6m_A 1v6n_A 1v6o_A 2dva_A* 1cq9_A 1ciw_A* 1qf3_A* 1rir_A* 1rit_A* 2dh1_A 1cr7_A* 2dv9_A* 2dvb_A* 2dvd_A* 2dvf_A 2dvg_A* ...

Probab=100.00  E-value=1.2e-58  Score=463.55  Aligned_cols=218  Identities=29%  Similarity=0.488  Sum_probs=198.6

Q ss_pred             ceeeEEeCCCC--CCCeEEEcceEee-cCcEEecCC-CCCeEEEEEcCCCccccCCCCCcccceEEEEEEEEecCCCCCC
Q 005257           24 SAVDFVFNGFN--SSNLSLYGTATVE-SRILTLTNS-TTFTIGRALYPSKIPTKRPNSSYVYPFSTSFIFAMAPYKGVLA   99 (705)
Q Consensus        24 ~~~~f~f~~f~--~~~~~~~g~a~~~-~~~l~lt~~-~~~~~Gr~~y~~pv~l~~~~~~~~~sF~t~F~f~i~~~~~~~~   99 (705)
                      ..++|+|++|+  ..||+|+|||++. +|.|+||++ ..+++|||+|++||+|||+.+|+++||+|+|+|.|.+++...+
T Consensus         2 ~~~~F~f~~F~~~~~~l~l~G~A~v~~~g~l~LT~~~~~~~~Gra~y~~Pi~l~~~~tg~vaSFsT~F~F~I~~~~~~~~   81 (232)
T 1v6i_A            2 ETVSFNFNSFSEGNPAINFQGDVTVLSNGNIQLTNLNKVNSVGRVLYAMPVRIWSSATGNVASFLTSFSFEMKDIKDYDP   81 (232)
T ss_dssp             EEEEEEESSCCTTCTTEEEEESCEECTTSCEECSCTTSTTCEEEEEESSCEECBCTTTCCBCEEEEEEEEEEECCSSSBC
T ss_pred             cceEEEcCCCCCCCCCeEEcccEEEccCCcEEeCCCCCCCceEEEEeCCCEEeecCCCCCccceEEEEEEEEecCCCCCC
Confidence            46799999998  5899999999996 799999998 8899999999999999999999999999999999998877778


Q ss_pred             CCceEEEEeeCC-CCCCCC-CCCcccccccCCCCCCCCcEEEEEeecccCCCCCCCCCCeeEEecCCCcccccccccccC
Q 005257          100 GHGLVFLFVPFH-GIKGAT-EAQHLGLFNRTNDGNSSNHVFGVEFDVFKNQEFNDIDENHVGIDVNSLTSVSAHAAGYWP  177 (705)
Q Consensus       100 g~G~aF~~~~~~-~~~~~~-~g~~lGl~~~~~~~~~~~~~vaVEFDt~~n~~~~d~~~~Hvgidvns~~S~~~~~~~~~~  177 (705)
                      ||||||||+|.. .+|.++ .||||||+|.    ++.+|+|||||||++|.+++||++||||||||+++|+++++     
T Consensus        82 gdGlAF~l~p~~~~~p~~~~~g~~LGl~n~----~~~~~~vAVEFDT~~n~~~~Dp~~nHVGIdvns~~S~~~~~-----  152 (232)
T 1v6i_A           82 ADGIIFFIAPEDTQIPAGSIGGGTLGVSDT----KGAGHFVGVEFDTYSNSEYNDPPTDHVGIDVNSVDSVKTVP-----  152 (232)
T ss_dssp             CCEEEEEEEETTCCCCTTCCCGGGTTTSCT----TSEEEEEEEEEECSCCGGGTCCSSCEEEEEEEESSCSEEEE-----
T ss_pred             CCCEEEEEecCCCCCCCCcCCCcccccccC----CCcccEEEEEeecccccccCCCCCCeEEEEcCCcccccccc-----
Confidence            999999999986 468778 8999999986    56789999999999999999999999999999999988743     


Q ss_pred             CCCCCCCCCCCCCCCCCCccccceeecCCCcceEEEEEe--cCceEEEEEEEccCCCCCCCceeeeecCccccccceecc
Q 005257          178 DNQTDSSGSNSNSGTGDDEKSFKELKLNNGKNYQVWIDY--ADSFINITMVEAGMKRPKRPLLSVPLNLSGVLEDEMYVG  255 (705)
Q Consensus       178 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~I~Y--~~~~~~v~~~~~~~~~~~~~~ls~~vdl~~~l~~~~~vG  255 (705)
                                              ++|.+|+.++|||+|  ..++|+|+|++ +  +|..|+|+..|||+++|||+||||
T Consensus       153 ------------------------~~l~~G~~~~v~I~Yd~~~~~L~V~l~~-~--~~~~~~ls~~vdL~~~l~e~v~VG  205 (232)
T 1v6i_A          153 ------------------------WNSVSGAVVKVTVIYDSSTKTLSVAVTN-D--NGDITTIAQVVDLKAKLPERVKFG  205 (232)
T ss_dssp             ------------------------CCCCTTCEEEEEEEEETTTTEEEEEEEC-T--TSCEEEEEEECCHHHHSCSEEEEE
T ss_pred             ------------------------ccccCCCEEEEEEEEeCCCcEEEEEEec-C--CCCcceEEEEechHHhCCccEEEE
Confidence                                    358899999999999  55789999987 3  477899999999999999999999


Q ss_pred             ccccccc--ccccceeeeeeecccc
Q 005257          256 FTAATGQ--LVESHKILAWSFSNTK  278 (705)
Q Consensus       256 fsastg~--~~~~h~i~~wsf~~~~  278 (705)
                      || |||.  ..|.|+|++|+|++..
T Consensus       206 FS-sTG~~~~~~~h~IlsWsF~s~l  229 (232)
T 1v6i_A          206 FS-ASGSLGGRQIHLIRSWSFTSTL  229 (232)
T ss_dssp             EE-EECCSSBCCEEEEEEEEEEEEE
T ss_pred             EE-ecCCCccccEEEEEEEEEEeec
Confidence            99 9998  6999999999998764

>1fx5_A UEA-I, UE-I, anti-H(O) lectin I; legume lectin, HOMO-dimer, fucose specific lectin, SUG binding protein; HET: NAG FUC BMA MAN; 2.20A {Ulex europaeus} SCOP: b.29.1.1 PDB: 1jxn_A*

Probab=100.00  E-value=2.8e-58  Score=463.91  Aligned_cols=221  Identities=28%  Similarity=0.397  Sum_probs=198.9

Q ss_pred             ceeeEEeCCCC--CCCeEEEcceEee-cCcEEecCCC---CCeEEE-EEcCCCccccCCCCCcccceEEEEEEEEecC-C
Q 005257           24 SAVDFVFNGFN--SSNLSLYGTATVE-SRILTLTNST---TFTIGR-ALYPSKIPTKRPNSSYVYPFSTSFIFAMAPY-K   95 (705)
Q Consensus        24 ~~~~f~f~~f~--~~~~~~~g~a~~~-~~~l~lt~~~---~~~~Gr-~~y~~pv~l~~~~~~~~~sF~t~F~f~i~~~-~   95 (705)
                      ..++|+|++|+  ..||+|+|||.+. +|.|+||++.   .+++|| |+|++||+|||+.+|+++||+|+|+|.|.++ +
T Consensus         2 ~~~~F~f~~F~~~~~~l~l~G~A~v~~~g~l~LT~~~~~~~~~~Gr~a~y~~Pv~l~~~~tg~vaSFsT~F~F~I~~~~~   81 (242)
T 1fx5_A            2 DDLSFKFKNFSQNGKDLSFQGNASVIETGVLQLNKVGNNLPDETGGIARYIAPIHIWNCNTGELASFITSFSFFMETSAN   81 (242)
T ss_dssp             CEEEEEESSCCTTCSSEEEEETCEECTTSCEESCCCSSSSCSEEEEEEEESSCEECEETTTTEECEEEEEEEEEEEESSC
T ss_pred             cceEEEcCCCCCCCCCeEEcccEEeccCCcEEecCCCCcccCCccCEEEeCCCEEeecCCCCCccceEEEEEEEEecCCC
Confidence            46899999998  5899999999996 7999999986   689999 9999999999999999999999999999887 5


Q ss_pred             CCCCCCceEEEEeeCCCCCCCCCCCcccccccCCCCCCCCcEEEEEeecccCCCC-CCCCCCeeEEecCCCccccccccc
Q 005257           96 GVLAGHGLVFLFVPFHGIKGATEAQHLGLFNRTNDGNSSNHVFGVEFDVFKNQEF-NDIDENHVGIDVNSLTSVSAHAAG  174 (705)
Q Consensus        96 ~~~~g~G~aF~~~~~~~~~~~~~g~~lGl~~~~~~~~~~~~~vaVEFDt~~n~~~-~d~~~~Hvgidvns~~S~~~~~~~  174 (705)
                      ...+||||||||+|....| ++.||||||||.++ ++..+|+|||||||++|.++ |||++||||||||+++|+++++  
T Consensus        82 ~~~~gdGlAF~l~p~~~~~-~~~g~~LGl~n~~~-~~~~n~~vAVEFDT~~N~~~~~Dp~~nHVGIdvNs~~S~~~~~--  157 (242)
T 1fx5_A           82 PKAATDGLTFFLAPPDSPL-RRAGGYFGLFNDTK-CDSSYQTVAVEFDTIGSPVNFWDPGFPHIGIDVNCVKSINAER--  157 (242)
T ss_dssp             GGGCCCEEEEEEECTTCCC-CBCGGGTTTBSSSC-CCGGGCCEEEEEECCCTTTSTTSCSSCEEEEEESSSSCSEEEE--
T ss_pred             CCCCCCcEEEEEecCCCCC-CCCCCcccccccCC-CCccCcEEEEEeccccCcccccCCCCCeEEEecCCccccceec--
Confidence            6678999999999986655 47899999999765 57899999999999999997 8999999999999999988743  


Q ss_pred             ccCCCCCCCCCCCCCCCCCCCccccceeecCCC--cceEEEEEe--cCceEEEEEEEccCCCCCCCceeeeecCcccccc
Q 005257          175 YWPDNQTDSSGSNSNSGTGDDEKSFKELKLNNG--KNYQVWIDY--ADSFINITMVEAGMKRPKRPLLSVPLNLSGVLED  250 (705)
Q Consensus       175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g--~~~~~~I~Y--~~~~~~v~~~~~~~~~~~~~~ls~~vdl~~~l~~  250 (705)
                                                 ++|.+|  +.++|||+|  ..++|+|+|++.+.  |..|+|+..|||+++|||
T Consensus       158 ---------------------------~~l~~G~~~~~~v~I~Yd~~~~~L~V~l~~~~~--~~~~~ls~~vdL~~~l~e  208 (242)
T 1fx5_A          158 ---------------------------WNKRYGLNNVANVEIIYEASSKTLTASLTYPSD--QTSISVTSIVDLKEILPE  208 (242)
T ss_dssp             ---------------------------CCCCCSGGGCEEEEEEEETTTTEEEEEEEETTT--TEEEEEEEECCGGGTSCS
T ss_pred             ---------------------------ccccCCCceeEEEEEEEeCCCCEEEEEEecCCC--CccceeeEEechHHhCCc
Confidence                                       357899  999999999  55689999987643  567899999999999999


Q ss_pred             ceeccccccc--ccccccceeeeeeecccc
Q 005257          251 EMYVGFTAAT--GQLVESHKILAWSFSNTK  278 (705)
Q Consensus       251 ~~~vGfsast--g~~~~~h~i~~wsf~~~~  278 (705)
                      +|||||||||  |.. |.|+|++|+|++..
T Consensus       209 ~v~VGFSAsT~~G~~-~~h~IlsWsF~s~l  237 (242)
T 1fx5_A          209 WVSVGFSGSTYIGRQ-ATHEVLNWYFTSTF  237 (242)
T ss_dssp             EEEEEEEEEEETTSC-EEEEEEEEEEEEES
T ss_pred             cEEEEEEecccCCCc-ceeEEEEEEeEeec
Confidence            9999999999  988 99999999999864

>1gzc_A Erythrina crista-galli lectin; carbohydrate, sugar binding protein, saccharide, protein-carbohydrate interactions, lactose, glycoprotein; HET: LAT; 1.58A {Erythrina crista-galli} SCOP: b.29.1.1 PDB: 1gz9_A* 1fyu_A* 1ax0_A* 1ax1_A* 1ax2_A* 1axy_A* 1axz_A* 1lte_A* 1sfy_A* 1v00_A* 1uzz_A 1uzy_A* 3n35_A* 3n36_A* 3n3h_A*

Probab=100.00  E-value=3.7e-58  Score=462.72  Aligned_cols=220  Identities=30%  Similarity=0.517  Sum_probs=196.6

Q ss_pred             ceeeEEeCCCC--CCCeEEEcceEee-cCcEEecCCC------CCeEEEEEcCCCccccCCCCCcccceEEEEEEEEecC
Q 005257           24 SAVDFVFNGFN--SSNLSLYGTATVE-SRILTLTNST------TFTIGRALYPSKIPTKRPNSSYVYPFSTSFIFAMAPY   94 (705)
Q Consensus        24 ~~~~f~f~~f~--~~~~~~~g~a~~~-~~~l~lt~~~------~~~~Gr~~y~~pv~l~~~~~~~~~sF~t~F~f~i~~~   94 (705)
                      ..++|+|++|+  ..||+|+|||++. +|.|+||++.      .+++|||+|++||+|||+.+|+++||+|+|+|.|.++
T Consensus         2 ~~~~F~f~~F~~~~~~l~l~G~A~v~~~g~l~LT~~~~~~~~~~~~~Gra~y~~Pi~l~~~~tg~vaSFsT~F~F~I~~~   81 (239)
T 1gzc_A            2 ETISFSFSEFEPGNDNLTLQGAALITQSGVLQLTKINQNGMPAWDSTGRTLYTKPVHMWDSTTGTVASFETRFSFSIEQP   81 (239)
T ss_dssp             EEEEEEESSCCTTCTTEEEEETCEECTTSCEESSCBCTTSCBCSSCEEEEEESSCEECBCTTTCCBCEEEEEEEEECCCC
T ss_pred             eeEEEEeCCCCCCCCCeEEcccEEEcCCCcEEeCCCCcCCcccCCceEEEEeCCCEecccCCCCCccceEEEEEEEEeCC
Confidence            35799999998  5899999999996 7999999876      5799999999999999999999999999999999887


Q ss_pred             C-CCCCCCceEEEEeeCCCCCCCCCCCcccccccCCCCCCCCcEEEEEeecccCCCCCCCCCCeeEEecCCCcccccccc
Q 005257           95 K-GVLAGHGLVFLFVPFHGIKGATEAQHLGLFNRTNDGNSSNHVFGVEFDVFKNQEFNDIDENHVGIDVNSLTSVSAHAA  173 (705)
Q Consensus        95 ~-~~~~g~G~aF~~~~~~~~~~~~~g~~lGl~~~~~~~~~~~~~vaVEFDt~~n~~~~d~~~~Hvgidvns~~S~~~~~~  173 (705)
                      + ...+||||||||+|....| ++.||||||||.++ ++..+|+|||||||++|. |.||++|||||||||+.|+++++ 
T Consensus        82 ~~~~~~gdGlAF~l~p~~~~~-~~~g~~LGl~n~~~-~~~~~~~vAVEFDT~~n~-~dDp~~nHVGIdvns~~S~~~~~-  157 (239)
T 1gzc_A           82 YTRPLPADGLVFFMGPTKSKP-AQGYGYLGVFNNSK-QDNSYQTLAVEFDTFSNP-WDPPQVPHIGIDVNSIRSIKTQP-  157 (239)
T ss_dssp             CSSSCCCEEEEEEEECSSCCC-CCCGGGTTTCSSSS-CCGGGCCEEEEEECSCCT-TSCSSSSEEEEEESSSSCSEEEE-
T ss_pred             CCCCCCCCcEEEEEecCCCCC-CCCCCcccccccCC-CCccccEEEEEEeccccc-CCCCCCCeEEEecCCcccccccc-
Confidence            6 6678999999999986655 48899999999764 577899999999999998 77799999999999999988743 


Q ss_pred             cccCCCCCCCCCCCCCCCCCCCccccceeecCCCcceEEEEEe--cCceEEEEEEEccCCCCCCCceeeeecCccccccc
Q 005257          174 GYWPDNQTDSSGSNSNSGTGDDEKSFKELKLNNGKNYQVWIDY--ADSFINITMVEAGMKRPKRPLLSVPLNLSGVLEDE  251 (705)
Q Consensus       174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~I~Y--~~~~~~v~~~~~~~~~~~~~~ls~~vdl~~~l~~~  251 (705)
                                                  ++|.+|+.++|||+|  ..+.|+|++++.+  .|..|+|+..|||+.+|||+
T Consensus       158 ----------------------------~~l~~G~~~~v~I~Yd~~~~~L~V~l~~~~--~~~~~~ls~~vdL~~~l~e~  207 (239)
T 1gzc_A          158 ----------------------------FQLDNGQVANVVIKYDAPSKILHVVLVYPS--SGAIYTIAEIVDVKQVLPDW  207 (239)
T ss_dssp             ----------------------------CCCCTTCEEEEEEEEETTTTEEEEEEECTT--TCCEEEEEEECCHHHHSCSE
T ss_pred             ----------------------------ccccCCCEEEEEEEEeCCCcEEEEEEecCC--CCccceEEEEechHHhCCCc
Confidence                                        358899999999999  5568999998654  36678999999999999999


Q ss_pred             eeccccccccc---ccccceeeeeeeccc
Q 005257          252 MYVGFTAATGQ---LVESHKILAWSFSNT  277 (705)
Q Consensus       252 ~~vGfsastg~---~~~~h~i~~wsf~~~  277 (705)
                      ||||||||||.   ..|.|+|++|+|+++
T Consensus       208 v~VGFSAsTG~~~~~~~~h~IlsWsF~s~  236 (239)
T 1gzc_A          208 VDVGLSGATGAQRDAAETHDVYSWSFQAS  236 (239)
T ss_dssp             EEEEEEEEECSSTTCCCCCEEEEEEEEEE
T ss_pred             eEEEEEeccCCCccccceEEEEEEEeEEe
Confidence            99999999997   489999999999875

>2eig_A Lectin; L-fucosyl, N-acetyl-D-glucosamine, SUG binding protein; HET: NAG; 2.00A {Lotus tetragonolobus}

Probab=100.00  E-value=1.1e-57  Score=456.72  Aligned_cols=215  Identities=29%  Similarity=0.462  Sum_probs=196.4

Q ss_pred             eeEEeCCCC-CCCeEEEcceEee-cCcEEecCC--CCCeEEEEEcCCCccccCCCCCcccceEEEEEEEEecCCCCCCCC
Q 005257           26 VDFVFNGFN-SSNLSLYGTATVE-SRILTLTNS--TTFTIGRALYPSKIPTKRPNSSYVYPFSTSFIFAMAPYKGVLAGH  101 (705)
Q Consensus        26 ~~f~f~~f~-~~~~~~~g~a~~~-~~~l~lt~~--~~~~~Gr~~y~~pv~l~~~~~~~~~sF~t~F~f~i~~~~~~~~g~  101 (705)
                      ++|+|++|. ..||+|+|||++. +|.|+||++  ..+++|||+|++||+|||+.+|+++||+|+|+|.|.+++...+||
T Consensus         1 ~sF~f~~F~~~~~l~l~G~A~v~~~g~l~LT~~~~~~~~~Gra~y~~Pv~l~~~~tg~vaSFsT~F~F~I~~~~~~~~gd   80 (234)
T 2eig_A            1 VSFNYTRFKDDGSLIFQGDAKIWTDGRLAMPTDPLVNRTTSHALYATPVPIWDSATGNVASFITSFSFIVSNVQRYPPTD   80 (234)
T ss_dssp             CEEEESSCCSSSSEEEEETCEEEGGGEEESSSCGGGSSEEEEEEESSCEECBCTTTCCBCEEEEEEEEEEEECTTSCCCC
T ss_pred             CeEEcCCCCCCCCeEEcccEEEcCCCCeeeCCCCCccCceEEEEeCCCEEeecCCCCCccceEEEEEEEEeCCCCCCCCC
Confidence            479999998 7899999999996 799999998  778999999999999999999999999999999999887777899


Q ss_pred             ceEEEEeeCC-CCCCCCCCCcccccccCCCCCCCCcEEEEEeecccCCCCCCCCC---CeeEEecCCCcccccccccccC
Q 005257          102 GLVFLFVPFH-GIKGATEAQHLGLFNRTNDGNSSNHVFGVEFDVFKNQEFNDIDE---NHVGIDVNSLTSVSAHAAGYWP  177 (705)
Q Consensus       102 G~aF~~~~~~-~~~~~~~g~~lGl~~~~~~~~~~~~~vaVEFDt~~n~~~~d~~~---~Hvgidvns~~S~~~~~~~~~~  177 (705)
                      ||||||+|.. .+|.++.|+||||+|.+   ++.+|+|||||||++|.  +||++   |||||||||+.|.++++     
T Consensus        81 GlAF~l~p~~~~~p~~~~g~~LGl~n~~---~~~~~~vAVEFDT~~N~--~Dp~~~~~nHVGIdvNsi~S~~~~~-----  150 (234)
T 2eig_A           81 GVVFFLAPWGTEIPPNSQGGYLGITDSS---NSQNQFVAVEFDSHPNV--WDPKSLRSSHIGIDVNSIMSLKAVN-----  150 (234)
T ss_dssp             EEEEEEEETTCCCCTTCCGGGTTTCCTT---CSCCCCEEEEEECSCCT--TSCTTTCSSEEEEEESSSSCSEEEE-----
T ss_pred             cEEEEEecCCCCCCcCCCCCccccccCC---CccccEEEEEeccccCc--cCCCCCCCCceEEecCCccccceec-----
Confidence            9999999986 47888899999999975   67899999999999998  59999   99999999999987743     


Q ss_pred             CCCCCCCCCCCCCCCCCCccccceeecCCCcceEEEEEe--cCceEEEEEEEccCCCCCCCceeeeecCccccccceecc
Q 005257          178 DNQTDSSGSNSNSGTGDDEKSFKELKLNNGKNYQVWIDY--ADSFINITMVEAGMKRPKRPLLSVPLNLSGVLEDEMYVG  255 (705)
Q Consensus       178 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~I~Y--~~~~~~v~~~~~~~~~~~~~~ls~~vdl~~~l~~~~~vG  255 (705)
                                              ++|.+|+.++|||+|  ..+.|+|+|++ +  +|..|+|+..|||+++|||+||||
T Consensus       151 ------------------------~~l~~g~~~~v~I~Yd~~~~~L~V~l~~-~--~~~~~~ls~~vdL~~~l~e~v~VG  203 (234)
T 2eig_A          151 ------------------------WNRVSGSLEKATIIYDSDTKILTVVMTH-Q--NGQITTISQEIDLKTVLPEKVSVG  203 (234)
T ss_dssp             ------------------------CCCCTTCCEEEEEEEETTTTEEEEEEEE-T--TSCEEEEEEECCHHHHSCSEEEEE
T ss_pred             ------------------------ccccCCCEEEEEEEEeCCCcEEEEEEec-C--CCCcceEeEeechHHhcCCceEEE
Confidence                                    357899999999999  55689999998 4  477899999999999999999999


Q ss_pred             ccccc--ccccccceeeeeeecccc
Q 005257          256 FTAAT--GQLVESHKILAWSFSNTK  278 (705)
Q Consensus       256 fsast--g~~~~~h~i~~wsf~~~~  278 (705)
                      |||||  |.. +.|+|++|+|++..
T Consensus       204 FSAsT~~G~~-~~h~IlsWsF~s~l  227 (234)
T 2eig_A          204 FSATTWNPER-ERHDIYSWSFTSTL  227 (234)
T ss_dssp             EEEEECSSCC-EEEEEEEEEEEEEC
T ss_pred             EEeeecCCCc-ceeEEEEEEEEecC
Confidence            99999  988 99999999999864

>1g7y_A Stem/LEAF lectin DB58; jelly roll fold, sugar binding protein; HET: NAG FUC FUL; 2.50A {Vigna unguiculata subsp} SCOP: b.29.1.1 PDB: 1lul_A 1lu1_A* 1bjq_A* 1lu2_A*

Probab=100.00  E-value=7.5e-58  Score=463.83  Aligned_cols=221  Identities=32%  Similarity=0.524  Sum_probs=199.6

Q ss_pred             ceeeEEeCCCCCCCeEEEcceEeecCcEEecCCC------CCeEEEEEcCCCccccCCCCCcccceEEEEEEEEecCCCC
Q 005257           24 SAVDFVFNGFNSSNLSLYGTATVESRILTLTNST------TFTIGRALYPSKIPTKRPNSSYVYPFSTSFIFAMAPYKGV   97 (705)
Q Consensus        24 ~~~~f~f~~f~~~~~~~~g~a~~~~~~l~lt~~~------~~~~Gr~~y~~pv~l~~~~~~~~~sF~t~F~f~i~~~~~~   97 (705)
                      ..++|+|++|+..||+|+|||.+.+|.|+||++.      .+++|||+|++||+|||+.+|+++||+|+|+|.|.+++..
T Consensus         2 ~~~~F~f~~F~~~~l~l~GdA~v~~g~l~LT~~~~~~~~~~~~~Gra~y~~Pv~l~d~~tg~vaSFsT~F~F~I~~~~~~   81 (253)
T 1g7y_A            2 DIQSFSFKNFNSSSFILQGDATVSSSKLRLTKVKGNGLPTLSSLGRAFYSSPIQIYDKSTGAVASWATSFTANIFAPNKS   81 (253)
T ss_dssp             EEEEEEESSCCSSCEEEEETCEEETTEEECSCBCTTSCBCSSCEEEEEESSCEECBCTTTCCBCEEEEEEEEECCCSSGG
T ss_pred             cceEEEcCCCCcCCEEEecceEEeCCEEEeCCCCCCCccccCCeEEEEECCCEEeecCCCCCccceEEEEEEEEecCCCC
Confidence            4689999999989999999999999999999976      5799999999999999999999999999999999987667


Q ss_pred             CCCCceEEEEeeCCCCCCCCCCCcccccccCCCCCCCCcEEEEEeecccCCCCCCCCCCeeEEecCCCcccccccccccC
Q 005257           98 LAGHGLVFLFVPFHGIKGATEAQHLGLFNRTNDGNSSNHVFGVEFDVFKNQEFNDIDENHVGIDVNSLTSVSAHAAGYWP  177 (705)
Q Consensus        98 ~~g~G~aF~~~~~~~~~~~~~g~~lGl~~~~~~~~~~~~~vaVEFDt~~n~~~~d~~~~Hvgidvns~~S~~~~~~~~~~  177 (705)
                      .+||||||||+|....| ++.|+||||||.++ ++..+|+|||||||++|.+ +||++|||||||||+.|.++++     
T Consensus        82 ~~gdGlAF~l~p~~~~~-~~~g~~LGl~n~~~-~~~~n~~vAVEFDT~~N~~-~Dp~~nHVGIdvns~~S~~t~~-----  153 (253)
T 1g7y_A           82 SSADGIAFALVPVGSEP-KSNSGFLGVFDSDV-YDNSAQTVAVEFDTFSNTD-WDPTSRHIGIDVNSIKSIRTAS-----  153 (253)
T ss_dssp             GCCCEEEEEEEETTCCC-CCCGGGTTTCSCSS-CCGGGCCEEEEEECSCCTT-TCCSSCEEEEEESSSSCSEEEE-----
T ss_pred             CCCCcEEEEEecCCCCC-CCCCCcccccccCC-CCccCceEEEEecceeccC-cCCCCCcEeeccCCccccceec-----
Confidence            78999999999987655 48899999999764 4779999999999999998 6999999999999999987743     


Q ss_pred             CCCCCCCCCCCCCCCCCCccccceeecCCCcceEEEEEe--cCceEEEEEEEccCCCCCCCceeeeecCccccccceecc
Q 005257          178 DNQTDSSGSNSNSGTGDDEKSFKELKLNNGKNYQVWIDY--ADSFINITMVEAGMKRPKRPLLSVPLNLSGVLEDEMYVG  255 (705)
Q Consensus       178 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~I~Y--~~~~~~v~~~~~~~~~~~~~~ls~~vdl~~~l~~~~~vG  255 (705)
                                              ++|.+|+.++|||+|  ..++|+|++.+.+  .|..|+|+..|||+.+||++||||
T Consensus       154 ------------------------~~l~~g~~~~v~I~Yd~~~~~L~V~l~~~~--~~~~~~ls~~vdL~~~l~e~~~VG  207 (253)
T 1g7y_A          154 ------------------------WGLANGQNAEILITYNAATSLLVASLVHPS--RRTSYIVSERVDITNELPEYVSIG  207 (253)
T ss_dssp             ------------------------CCCCTTSEEEEEEEEETTTTEEEEEEEETT--TTEEEEEEEECCHHHHSCSEEEEE
T ss_pred             ------------------------cccCCCCeEEEEEEEeCCCCEEEEEEecCC--CCCcceEEEEechHHhCCCceEEE
Confidence                                    357899999999999  4578999998754  356789999999999999999999


Q ss_pred             cccccccc---cccceeeeeeecccc
Q 005257          256 FTAATGQL---VESHKILAWSFSNTK  278 (705)
Q Consensus       256 fsastg~~---~~~h~i~~wsf~~~~  278 (705)
                      ||||||..   .+.|+|++|+|++..
T Consensus       208 FSAsTG~~~~~~~~H~IlsWsF~s~l  233 (253)
T 1g7y_A          208 FSATTGLSEGYTETHDVLSWSFASKL  233 (253)
T ss_dssp             EEEECCSSSSCCCCCEEEEEEEEEEE
T ss_pred             EEeCcCCCCcccceeEEEEEEEEeeC
Confidence            99999998   999999999999864

>1hql_A Lectin; xenograft antigen, sugar BI protein; HET: GLA MBG NAG; 2.20A {Griffonia simplicifolia} SCOP: b.29.1.1 PDB: 1gnz_A*

Probab=100.00  E-value=7.4e-58  Score=464.91  Aligned_cols=223  Identities=29%  Similarity=0.484  Sum_probs=198.6

Q ss_pred             ceeeEEeCCCC---CCCeEEEcceEeecCcEEecCCC------CCeEEEEEcCCCccccCCCCCcccceEEEEEEEEecC
Q 005257           24 SAVDFVFNGFN---SSNLSLYGTATVESRILTLTNST------TFTIGRALYPSKIPTKRPNSSYVYPFSTSFIFAMAPY   94 (705)
Q Consensus        24 ~~~~f~f~~f~---~~~~~~~g~a~~~~~~l~lt~~~------~~~~Gr~~y~~pv~l~~~~~~~~~sF~t~F~f~i~~~   94 (705)
                      ..++|+|++|.   ..||+|+|||.+.+|.||||++.      .+++|||+|++||+|||+.+|+++||+|+|+|.|.++
T Consensus         3 ~~~~F~f~~F~~~~~~~l~l~GdA~v~~g~l~LT~~~~~~~~~~~~~Gra~y~~Pv~l~d~~tg~vasFsT~F~F~I~~~   82 (257)
T 1hql_A            3 DSVSFTFPNFWSDVEDSIIFQGDANTTAGTLQLCKTNQYGTPLQWSAGRALYSDPVQLWDNKTESVASFYTEFTFFLKIT   82 (257)
T ss_dssp             -CCEEEESCSCSCGGGTEEEEETCEEETTEEECSCBCTTSCBCSSCEEEEEESSCEECCCSTTCCCCEEEEEEEEEEEEC
T ss_pred             cceEEEcCCCCCCCCCCEEEccceEecCCcEEecCCccCCcccCCCeEEEEECCCEecccCCCCCeeceEEEEEEEEecC
Confidence            45799999998   57999999999999999999976      5799999999999999999999999999999999887


Q ss_pred             CCCCCCCceEEEEeeCCCCCCCCCCCcccccccCC-CCCCCCcEEEEEeecccCCCCCCCCCCeeEEecCCCcccccccc
Q 005257           95 KGVLAGHGLVFLFVPFHGIKGATEAQHLGLFNRTN-DGNSSNHVFGVEFDVFKNQEFNDIDENHVGIDVNSLTSVSAHAA  173 (705)
Q Consensus        95 ~~~~~g~G~aF~~~~~~~~~~~~~g~~lGl~~~~~-~~~~~~~~vaVEFDt~~n~~~~d~~~~Hvgidvns~~S~~~~~~  173 (705)
                       ...+||||||||+|....| ++.|+||||+|.++ +++..+|+|||||||++|.+|+||++||||||||++.|+++++ 
T Consensus        83 -~~~~gdGlAF~l~p~~~~~-~~~g~~LGl~n~~~~~~~~~n~~vAVEFDT~~N~~~~Dp~~nHVGIdvNs~~S~~s~~-  159 (257)
T 1hql_A           83 -GNGPADGLAFFLAPPDSDV-KDAGEYLGLFNKSTATQPSKNQVVAVEFDTWTNPNFPEPSYRHIGINVNSIVSVATKR-  159 (257)
T ss_dssp             -SSCCCCEEEEEEECTTCCC-CCCGGGTTTSCTTTTTCGGGCCCEEEEEECSCCSSSCCCSSCEEEEEESSSSCSEEEE-
T ss_pred             -CCCCCCcEEEEEecCCCCC-CCCCccccccccccccCCccCceEEEEecccccccccCCCCCceeeeeCCccccceec-
Confidence             6678999999999986654 48899999999765 3678899999999999999999999999999999999988754 


Q ss_pred             cccCCCCCCCCCCCCCCCCCCCcccccee-ecCCCcceEEEEEe--cCceEEEEEEEccCCCCCCCceeeeecCcccccc
Q 005257          174 GYWPDNQTDSSGSNSNSGTGDDEKSFKEL-KLNNGKNYQVWIDY--ADSFINITMVEAGMKRPKRPLLSVPLNLSGVLED  250 (705)
Q Consensus       174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~g~~~~~~I~Y--~~~~~~v~~~~~~~~~~~~~~ls~~vdl~~~l~~  250 (705)
                        |                        ++ .|.+|+.++|||+|  ..++|+|++...+.   ..|+|+..|||+.+||+
T Consensus       160 --~------------------------~~~~l~~g~~~~v~I~Yd~~~~~L~V~l~~~~~---~~~~ls~~vdL~~~l~e  210 (257)
T 1hql_A          160 --W------------------------EDSDIFSGKIATARISYDGSAEILTVVLSYPDG---SDYILSHSVDMRQNLPE  210 (257)
T ss_dssp             --C------------------------CHHHHTSCSCEEEEEEEETTTTEEEEEEEETTT---EEEEEEEECCGGGTSCS
T ss_pred             --c------------------------CcccccCCceEEEEEEEeCCCCEEEEEEecCCC---CceeeEEeechHHhcCC
Confidence              3                        11 25579999999999  45799999987644   45899999999999999


Q ss_pred             ceecccccccc-cccccceeeeeeecccc
Q 005257          251 EMYVGFTAATG-QLVESHKILAWSFSNTK  278 (705)
Q Consensus       251 ~~~vGfsastg-~~~~~h~i~~wsf~~~~  278 (705)
                      +|||||||||| ...+.|+|++|+|++..
T Consensus       211 ~~~vGFSAsTG~~~~~~H~IlsWsF~s~~  239 (257)
T 1hql_A          211 SVRVGISASTGNNQFLTVYILSWRFSSNL  239 (257)
T ss_dssp             EEEEEEEEECCSCCCEEEEEEEEEEEEEC
T ss_pred             ceEEEEEeccCCCccceeEEEEEEeEecC
Confidence            99999999999 89999999999999876

>1qnw_A Chitin binding lectin, UEA-II; carbohydrate binding; HET: NAG; 2.35A {Ulex europaeus} SCOP: b.29.1.1 PDB: 1dzq_A* 1qoo_A* 1qos_A* 1qot_A*

Probab=100.00  E-value=1.6e-57  Score=458.47  Aligned_cols=222  Identities=30%  Similarity=0.514  Sum_probs=199.5

Q ss_pred             cCceeeEEeCCCC--CCCeEEEcceEee-cCcEEecCCC---CCeEEEEEcCCCccccCCCCCcccceEEEEEEEEecCC
Q 005257           22 SISAVDFVFNGFN--SSNLSLYGTATVE-SRILTLTNST---TFTIGRALYPSKIPTKRPNSSYVYPFSTSFIFAMAPYK   95 (705)
Q Consensus        22 ~~~~~~f~f~~f~--~~~~~~~g~a~~~-~~~l~lt~~~---~~~~Gr~~y~~pv~l~~~~~~~~~sF~t~F~f~i~~~~   95 (705)
                      ++..++|+|++|+  ..||+|+|||.+. +|.|+||++.   .+++|||+|++||+|||+.+|+++||+|+|+|.|.++ 
T Consensus         2 s~~~~~F~f~~F~~~~~~l~l~G~A~i~~~g~l~LT~~~~~~~~~~Gra~y~~Pv~l~~~~tg~vasFsT~F~F~I~~~-   80 (242)
T 1qnw_A            2 LSDDLSFNFDKFVPNQKNIIFQGDASVSTTGVLQVTKVSKPTTTSIGRALYAAPIQIWDSITGKVASFATSFSFVVKAD-   80 (242)
T ss_dssp             -CCSEEEEESSCCTTCTTEEEEETCEECTTSCEESSCCC--CCCEEEEEEESSCEECBCTTTCCBCEEEEEEEEECCBS-
T ss_pred             CccceEEEcCCCCCCCCCeEEccceEEccCCcEEecCCCCcccCCeEEEEeCCCEeeecCCCCCcccEEEEEEEEEecC-
Confidence            3457899999998  5899999999996 7999999987   7899999999999999999999999999999999887 


Q ss_pred             CCCCCCceEEEEeeCCC-CCCCCCCCcccccccCCCCCCCCcEEEEEeecc----cCCCCCCCCCCeeEEecCCCccccc
Q 005257           96 GVLAGHGLVFLFVPFHG-IKGATEAQHLGLFNRTNDGNSSNHVFGVEFDVF----KNQEFNDIDENHVGIDVNSLTSVSA  170 (705)
Q Consensus        96 ~~~~g~G~aF~~~~~~~-~~~~~~g~~lGl~~~~~~~~~~~~~vaVEFDt~----~n~~~~d~~~~Hvgidvns~~S~~~  170 (705)
                      ...+||||||||+|... +|.++.||||||+|.++ ++..+|+|||||||+    +|.  +||++||||||||++.|+++
T Consensus        81 ~~~~gdGlAF~l~p~~~~~p~~~~g~~LGl~n~~~-~~~~~~~vAVEFDT~~~~~~N~--~Dp~~nHVGIdvNs~~S~~~  157 (242)
T 1qnw_A           81 KSDGVDGLAFFLAPANSQIPSGSSAGMFGLFSSSD-SKSSNQIIAVEFDTYFGKAYNP--WDPDFKHIGIDVNSIKSIKT  157 (242)
T ss_dssp             SSCCCCEEEEEEEETTCCCCTTCCGGGTTTCSSSS-CCTTSCCEEEEEECCCCTTTCT--TSCSSCEEEEEESSSSCSEE
T ss_pred             CCCCCCCEEEEEecCCCCCCcCCCCCcccccccCC-CCccccEEEEEeecccccccCC--CCCCCCcEEEecCCccccce
Confidence            66789999999999864 78889999999999764 577899999999999    998  69999999999999999887


Q ss_pred             ccccccCCCCCCCCCCCCCCCCCCCccccceeecCCCcceEEEEEe--cCceEEEEEEEccCCCCCCCceeeeecCcccc
Q 005257          171 HAAGYWPDNQTDSSGSNSNSGTGDDEKSFKELKLNNGKNYQVWIDY--ADSFINITMVEAGMKRPKRPLLSVPLNLSGVL  248 (705)
Q Consensus       171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~I~Y--~~~~~~v~~~~~~~~~~~~~~ls~~vdl~~~l  248 (705)
                      ++                             ++|.+|+.++|||+|  ..+.|+|+|.+.+  .|..|+|+..|||+.+|
T Consensus       158 ~~-----------------------------~~l~~G~~~~v~I~Yd~~~~~L~V~l~~~~--~~~~~~ls~~vdL~~~l  206 (242)
T 1qnw_A          158 VK-----------------------------WDWRNGEVADVVITYRAPTKSLTVCLSYPS--DGTSNIITASVDLKAIL  206 (242)
T ss_dssp             EE-----------------------------CCCCTTCCEEEEEEEEGGGTEEEEEEECTT--TCCEEEEEEECCHHHHS
T ss_pred             ec-----------------------------ccccCCCEEEEEEEEeCCCcEEEEEEecCC--CCcceeEEEeechHHhc
Confidence            43                             357899999999999  5568999997654  36678999999999999


Q ss_pred             ccceecccccccccc--cccceeeeeeecccc
Q 005257          249 EDEMYVGFTAATGQL--VESHKILAWSFSNTK  278 (705)
Q Consensus       249 ~~~~~vGfsastg~~--~~~h~i~~wsf~~~~  278 (705)
                      ||+||||||||||..  .|.|+|++|+|++..
T Consensus       207 ~e~v~VGFSAsTG~~~~~~~h~IlsWsF~s~l  238 (242)
T 1qnw_A          207 PEWVSVGFSGGVGNAAEFETHDVLSWYFTSNL  238 (242)
T ss_dssp             CSEEEEEEEEEESCGGGCBCCEEEEEEEEEEC
T ss_pred             CCceEEEEEeccCCCccceEEEEEEEEeEeec
Confidence            999999999999998  999999999999764

>2bqp_A Protein (PEA lectin); D-glucopyranose complex, sugar binding protein; HET: GLC; 1.90A {Pisum sativum} SCOP: b.29.1.1

Probab=100.00  E-value=2.3e-57  Score=457.02  Aligned_cols=222  Identities=31%  Similarity=0.492  Sum_probs=200.2

Q ss_pred             ceeeEEeCCCC--CCCeEEEcceEeecCcEEecCCCCCeEEEEEcCCCccccCCCCCcccceEEEEEEEEecCCCCCCCC
Q 005257           24 SAVDFVFNGFN--SSNLSLYGTATVESRILTLTNSTTFTIGRALYPSKIPTKRPNSSYVYPFSTSFIFAMAPYKGVLAGH  101 (705)
Q Consensus        24 ~~~~f~f~~f~--~~~~~~~g~a~~~~~~l~lt~~~~~~~Gr~~y~~pv~l~~~~~~~~~sF~t~F~f~i~~~~~~~~g~  101 (705)
                      ..++|+|++|+  ..||+|+|||...+|.|+||++..+++|||+|++||+|||+.+|+++||+|+|+|.|.+++...+||
T Consensus         2 ~~~~F~f~~F~~~~~~l~l~G~A~~~~g~l~LT~~~~~~~G~a~y~~Pv~l~~~~~~~~~sFst~F~F~I~~~~~~~~gd   81 (234)
T 2bqp_A            2 ETTSFLITKFSPDQQNLIFQGDGYTTKEKLTLTKAVKNTVGRALYSSPIHIWDRETGNVANFVTSFTFVINAPNSYNVAD   81 (234)
T ss_dssp             EEEEEEESSBCTTCTTEEEEETCEEETBEEEEECSCTTCEEEEEESSCEECBCTTTCCBCEEEEEEEEEEECSSTTSCCC
T ss_pred             cceEEEcCCCCCCCCCEEEeeceecCCCEEEeCCCCCCCEEEEEECCCEEcccCCCCceeeEEEEEEEEEeCCCCCCCCC
Confidence            46799999998  5899999999966899999999999999999999999999999999999999999999887777899


Q ss_pred             ceEEEEeeCCCCCCCCCCCcccccccCCCCCCCCcEEEEEeecccCCCCCCCC--CCeeEEecCCCcccccccccccCCC
Q 005257          102 GLVFLFVPFHGIKGATEAQHLGLFNRTNDGNSSNHVFGVEFDVFKNQEFNDID--ENHVGIDVNSLTSVSAHAAGYWPDN  179 (705)
Q Consensus       102 G~aF~~~~~~~~~~~~~g~~lGl~~~~~~~~~~~~~vaVEFDt~~n~~~~d~~--~~Hvgidvns~~S~~~~~~~~~~~~  179 (705)
                      ||||+|+|....|. +.|+||||||.++ ++..+|+|||||||++|.+ +||+  +||||||||++.|+++.+       
T Consensus        82 GlAF~l~p~~~~p~-~~g~~LGl~n~~~-~~~~~~~vAVEFDT~~N~~-~Dp~~~~nHVgIdvns~~S~~s~~-------  151 (234)
T 2bqp_A           82 GFTFFIAPVDTKPQ-TGGGYLGVFNSAE-YDKTTQTVAVEFDTFYNAA-WDPSNRDRHIGIDVNSIKSVNTKS-------  151 (234)
T ss_dssp             EEEEEEEETTCCCC-CCGGGTTTCSCSS-CCGGGCCEEEEEECSCCTT-TSCTTCCCEEEEEESSSSCSEEEE-------
T ss_pred             cEEEEEecCCCCCC-CCCCccccccccC-CCCCCcEEEEEEecccCcc-cCCCCCCCceeEeeCCccccceEe-------
Confidence            99999999876666 8899999999774 5788999999999999998 5999  999999999999987743       


Q ss_pred             CCCCCCCCCCCCCCCCccccceeecCCCcceEEEEEe--cCceEEEEEEEccCC---CCCCCceeeeecCccccccceec
Q 005257          180 QTDSSGSNSNSGTGDDEKSFKELKLNNGKNYQVWIDY--ADSFINITMVEAGMK---RPKRPLLSVPLNLSGVLEDEMYV  254 (705)
Q Consensus       180 ~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~I~Y--~~~~~~v~~~~~~~~---~~~~~~ls~~vdl~~~l~~~~~v  254 (705)
                                            +++.+|+.++|||+|  ..++|+|++...+..   +|..|+|+..|||+.+||++|||
T Consensus       152 ----------------------~~l~~g~~~~v~I~Yd~~~~~L~V~l~~~~~~~~~~p~~~~ls~~vdL~~~l~~~~yv  209 (234)
T 2bqp_A          152 ----------------------WKLQNGEEANVVIAFNAATNVLTVSLTYPNNSLEEEVTSYTLSDVVSLKDVVPEWVRI  209 (234)
T ss_dssp             ----------------------CCCCTTCEEEEEEEEETTTTEEEEEEEECC------CEEEEEEEECCGGGTSCSEEEE
T ss_pred             ----------------------eEEcCCCEEEEEEEEeCCCCEEEEEEecCCCCcccCCCcceEEEEechHHhCCCceEE
Confidence                                  357799999999999  447999999887655   67789999999999999999999


Q ss_pred             ccccccccccccceeeeeeeccc
Q 005257          255 GFTAATGQLVESHKILAWSFSNT  277 (705)
Q Consensus       255 Gfsastg~~~~~h~i~~wsf~~~  277 (705)
                      |||||||...+.|+|++|+|+++
T Consensus       210 GFSAsTG~~~~~H~IlsWsF~s~  232 (234)
T 2bqp_A          210 GFSATTGAEYAAHEVLSWSFHSE  232 (234)
T ss_dssp             EEEEECSSSCCEEEEEEEEEEEE
T ss_pred             EEEeccCCCcccEEEEEEEEEee
Confidence            99999999999999999999875

>2fmd_A Lectin, agglutinin, BMA; legume lectin, beta sandwich, protein-carbohydrate complex, sugar binding protein; HET: MAN; 1.90A {Bowringia mildbraedii}

Probab=100.00  E-value=4.4e-57  Score=456.20  Aligned_cols=221  Identities=32%  Similarity=0.511  Sum_probs=197.0

Q ss_pred             ceeeEEeCCCC--CCCeEEEcceEee-cCcEEecCCCC------CeEEEEEcCCCccccCCCCCcccceEEEEEEEEecC
Q 005257           24 SAVDFVFNGFN--SSNLSLYGTATVE-SRILTLTNSTT------FTIGRALYPSKIPTKRPNSSYVYPFSTSFIFAMAPY   94 (705)
Q Consensus        24 ~~~~f~f~~f~--~~~~~~~g~a~~~-~~~l~lt~~~~------~~~Gr~~y~~pv~l~~~~~~~~~sF~t~F~f~i~~~   94 (705)
                      ..++|+|++|+  ..||+|+|||.+. +|.|+||++..      +++|||+|++||+|||+ +|+++||+|+|+|.|.++
T Consensus         2 ~~~~F~f~~F~~~~~~l~l~G~A~v~~~g~l~LT~~~~~~~~~~~~~G~a~y~~Pv~l~~~-~g~~~sFst~F~F~I~~~   80 (240)
T 2fmd_A            2 NSVCFTFTDFESGQQDLIFQGDASVGSNKALQLTKVDSKGNPQGGSVGRALYTAPIRLWQS-SSLVASFETTFTFSISQG   80 (240)
T ss_dssp             CEEEEEESSCCTTCTTEEEEETCEECTTSCEECSCBCTTSCBCSSCEEEEEESSCEECCCT-TCSEEEEEEEEEEECCBS
T ss_pred             cceEEEcCCCCCCCCCeEEccceEEcCCCCEEeCCCCcCCcccCCCeEEEEECCCEEeeCC-CCCcCcEEEEEEEEEecC
Confidence            46899999998  5899999999996 78999999876      79999999999999999 999999999999999987


Q ss_pred             CCCCCCCceEEEEeeCCCCCCC-CCCCcccccccCCCCCCCCcEEEEEeecccCCCCCCCCCCeeEEecCCCcccccccc
Q 005257           95 KGVLAGHGLVFLFVPFHGIKGA-TEAQHLGLFNRTNDGNSSNHVFGVEFDVFKNQEFNDIDENHVGIDVNSLTSVSAHAA  173 (705)
Q Consensus        95 ~~~~~g~G~aF~~~~~~~~~~~-~~g~~lGl~~~~~~~~~~~~~vaVEFDt~~n~~~~d~~~~Hvgidvns~~S~~~~~~  173 (705)
                       ...+||||||+|+|....|.+ +.|+||||+|.+++++..+|+|||||||++|.+++||++||||||||++.|+++.+ 
T Consensus        81 -~~~~gdGlAF~l~p~~~~p~~g~~g~~LGl~n~~~~~~~~n~~vAVEfDT~~N~~~~Dp~~nHvgIdvns~~S~~s~~-  158 (240)
T 2fmd_A           81 -SSTPADALTFFIASPDTKIPSGSGGRLLGLFGSSNNAGSDNGVVSVEFDTYPNTDIGDPNYRHIGIDVNSIRSKAASK-  158 (240)
T ss_dssp             -SSSCCCEEEEEEECTTCCCCTTCCGGGTTTCSCCC----CCCEEEEEEECSCCGGGTCCSSCEEEEEESSSSCSEEEE-
T ss_pred             -CCCCCCcEEEEEecCCCCCCccCCCCcccccccCcCCCCcCcEEEEEeccccccccCCCCCCceeeccccccccceeE-
Confidence             667899999999998766665 88999999998777778999999999999999988999999999999999987743 


Q ss_pred             cccCCCCCCCCCCCCCCCCCCCccccceeecCCCcceEEEEEe--cCceEEEEEEEccCCCCCCCceeeeecCccccccc
Q 005257          174 GYWPDNQTDSSGSNSNSGTGDDEKSFKELKLNNGKNYQVWIDY--ADSFINITMVEAGMKRPKRPLLSVPLNLSGVLEDE  251 (705)
Q Consensus       174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~I~Y--~~~~~~v~~~~~~~~~~~~~~ls~~vdl~~~l~~~  251 (705)
                                                  +++.+|+.++|||+|  ..++|+|++.+.+.   ..|+|+..|||+.+||++
T Consensus       159 ----------------------------~~l~~g~~~~v~I~Yd~~~~~L~V~l~~~~~---~~~~ls~~vdL~~~l~~~  207 (240)
T 2fmd_A          159 ----------------------------WDWQNGKTATAHISYNSASKRLSVVSSYPNS---SPVVVSFDVELNNVBPBW  207 (240)
T ss_dssp             ----------------------------CCCCSSCEEEEEEEEETTTTEEEEEEECTTS---CCEEEEEECCGGGTSCSE
T ss_pred             ----------------------------EEeeCCCEEEEEEEEeCCCCEEEEEEecCCC---CceEEEEEechHHhCCCc
Confidence                                        357799999999999  45789999987554   468999999999999999


Q ss_pred             eecccccccccccccceeeeeeecccc
Q 005257          252 MYVGFTAATGQLVESHKILAWSFSNTK  278 (705)
Q Consensus       252 ~~vGfsastg~~~~~h~i~~wsf~~~~  278 (705)
                      ||||||||||...+.|+|++|+|++..
T Consensus       208 ~yvGFSAsTG~~~~~H~IlsWsF~s~~  234 (240)
T 2fmd_A          208 VRVGFSATTGQYTQTNNILAWSFRSSL  234 (240)
T ss_dssp             EEEEEEEECCSSCBCCEEEEEEEEEEE
T ss_pred             eEEEEEeccCCccccEEEEEEEeEecC
Confidence            999999999999999999999999864

>1sbf_A Soybean agglutinin; lectin; HET: NAG GAL; 2.43A {Glycine max} SCOP: b.29.1.1 PDB: 1sbd_A* 1sbe_A* 1g9f_A* 2sba_A*

Probab=100.00  E-value=3.1e-57  Score=458.76  Aligned_cols=218  Identities=34%  Similarity=0.519  Sum_probs=196.5

Q ss_pred             ceeeEEeCCCC--CCCeEEEcceEee-cCcEEecCCC------CCeEEEEEcCCCccccCCCCCcccceEEEEEEEEecC
Q 005257           24 SAVDFVFNGFN--SSNLSLYGTATVE-SRILTLTNST------TFTIGRALYPSKIPTKRPNSSYVYPFSTSFIFAMAPY   94 (705)
Q Consensus        24 ~~~~f~f~~f~--~~~~~~~g~a~~~-~~~l~lt~~~------~~~~Gr~~y~~pv~l~~~~~~~~~sF~t~F~f~i~~~   94 (705)
                      ..++|+|++|+  ..||+|+|||.+. +|.|+||++.      .+++|||+|++||+|||+.+|+++||+|+|+|.|.++
T Consensus         2 ~~~~F~f~~F~~~~~~l~l~GdA~v~~~g~l~LT~~~~~~~~~~~~~Gra~y~~Pv~l~d~~tg~vaSFsT~F~F~I~~~   81 (253)
T 1sbf_A            2 ETVSFSWNKFVPKQPNMILQGDAIVTSSGKLQLNKVDENGTPKPSSLGRALYSTPIHIWDKETGSVASFAASFNFTFYAP   81 (253)
T ss_dssp             EEEEEEESSCCTTCTTEEEEETCEECTTSCEECSCBCTTSCBCTTCEEEEEESSCEECBCTTTCCBCEEEEEEEEEEECS
T ss_pred             cceEEEcCCCCCCCCCeEEcccEEEcCCCeEEeCCCccCCcccCCCeEEEEECCCEecccCCCCcccceEEEEEEEEeCC
Confidence            46799999998  5899999999996 7999999976      5799999999999999999999999999999999988


Q ss_pred             CCCCCCCceEEEEeeCCCCCCCCCCCcccccccCCCCCCCCcEEEEEeecccCCCCCCCCCCeeEEecCCCccccccccc
Q 005257           95 KGVLAGHGLVFLFVPFHGIKGATEAQHLGLFNRTNDGNSSNHVFGVEFDVFKNQEFNDIDENHVGIDVNSLTSVSAHAAG  174 (705)
Q Consensus        95 ~~~~~g~G~aF~~~~~~~~~~~~~g~~lGl~~~~~~~~~~~~~vaVEFDt~~n~~~~d~~~~Hvgidvns~~S~~~~~~~  174 (705)
                      +...+||||||||+|....| ++.||||||||.+   ++.+|+|||||||++|.  +||++||||||||++.|.++++  
T Consensus        82 ~~~~~gdGlAF~l~p~~~~~-~~~g~~LGL~n~~---~~~n~~vAVEFDT~~N~--~Dp~~nHVGIdvNs~~S~~t~~--  153 (253)
T 1sbf_A           82 DTKRLADGLAFFLAPIDTKP-QTHAGYLGLFNEN---ESGDQVVAVEFDTFRNS--WDPPNPHIGINVNSIRSIKTTS--  153 (253)
T ss_dssp             STTSCCEEEEEEEEETTCCC-CCCGGGTTTCCTT---SCCCSCEEEEEECSCCT--TCCSSSEEEEEESSSSCSEEEE--
T ss_pred             CCCCCCCcEEEEEecCCCCC-CCCCCccccccCC---CcccceEEEEeccccCC--CCCCCCcEEEEcCCccccceec--
Confidence            77778999999999987655 4889999999975   67899999999999998  6999999999999999988743  


Q ss_pred             ccCCCCCCCCCCCCCCCCCCCccccceeecCCCcceEEEEEe--cCceEEEEEEEccCCCCCCCceeeeecCccccccce
Q 005257          175 YWPDNQTDSSGSNSNSGTGDDEKSFKELKLNNGKNYQVWIDY--ADSFINITMVEAGMKRPKRPLLSVPLNLSGVLEDEM  252 (705)
Q Consensus       175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~I~Y--~~~~~~v~~~~~~~~~~~~~~ls~~vdl~~~l~~~~  252 (705)
                                                 ++|.+|+.++|||+|  ..++|+|++++.+.  |..|+|+..|||+.+|||+|
T Consensus       154 ---------------------------~~l~~G~~~~v~I~Yd~~~~~L~V~l~~~~~--~~~~~ls~~vdL~~~l~e~~  204 (253)
T 1sbf_A          154 ---------------------------WDLANNKVAKVLITYDASTSLLVASLVYPSQ--RTSNILSDVVDLKTSLPEWV  204 (253)
T ss_dssp             ---------------------------CCCCTTCCEEEEEEEETTTTEEEEEEEETTT--TEEEEEEEECCHHHHSCSEE
T ss_pred             ---------------------------ccccCCCeeEEEEEEeCCCcEEEEEEecCCC--CCcceEEEEechHHhCCCce
Confidence                                       358899999999999  45789999987643  56789999999999999999


Q ss_pred             ecccccccccc--cccceeeeeeecccc
Q 005257          253 YVGFTAATGQL--VESHKILAWSFSNTK  278 (705)
Q Consensus       253 ~vGfsastg~~--~~~h~i~~wsf~~~~  278 (705)
                      |||||||||..  .+.|+|++|+|++..
T Consensus       205 ~VGFSAsTG~~~~~~~H~IlsWsF~s~l  232 (253)
T 1sbf_A          205 RIGFSAATGLDIPGESHDVLSWSFASNL  232 (253)
T ss_dssp             EEEEEEEECSSSCCCEEEEEEEEEEEEE
T ss_pred             EEEEEeccCCCccceeeEEEEEEeEeec
Confidence            99999999998  999999999999864

>1fat_A Phytohemagglutinin-L; glycoprotein, plant defense protein, lectin; HET: NAG; 2.80A {Phaseolus vulgaris} SCOP: b.29.1.1 PDB: 1g8w_A*

Probab=100.00  E-value=2.3e-57  Score=459.94  Aligned_cols=219  Identities=34%  Similarity=0.528  Sum_probs=197.7

Q ss_pred             ceeeEEeCCCCCCCeEEEcceEee-cCcEEecCCC------CCeEEEEEcCCCccccCCCCCcccceEEEEEEEEecCCC
Q 005257           24 SAVDFVFNGFNSSNLSLYGTATVE-SRILTLTNST------TFTIGRALYPSKIPTKRPNSSYVYPFSTSFIFAMAPYKG   96 (705)
Q Consensus        24 ~~~~f~f~~f~~~~~~~~g~a~~~-~~~l~lt~~~------~~~~Gr~~y~~pv~l~~~~~~~~~sF~t~F~f~i~~~~~   96 (705)
                      ..++|+|++|+..||+|+|||.+. +|.|+||++.      .+++|||+|++||+|||+.+|+++||+|+|+|.|.+++.
T Consensus         2 ~~~~F~f~~F~~~~l~l~G~A~v~~~g~l~LT~~~~~~~~~~~~~Gra~y~~Pv~l~d~~tg~vaSFsT~F~F~I~~~~~   81 (252)
T 1fat_A            2 NDIYFNFQRFNETNLILQRDASVSSSGQLRLTNLNGNGEPRVGSLGRAFYSAPIQIWDNTTGTVASFATSFTFNIQVPNN   81 (252)
T ss_dssp             CCEEEEESSCCGGGEEEEETCEECTTSCEECSCCC-CCCCCTTCEEEEEEEEEEECEETTTTEEEEEEEEEEEECCCCSS
T ss_pred             cceEEEcCCCCcCCEEEeccEEECCCCEEEeCCCCCCCccccCCEEEEEECCCEecccCCCCcccceEEEEEEEEeCCCC
Confidence            467999999998899999999996 7999999976      579999999999999999999999999999999998766


Q ss_pred             CCCCCceEEEEeeCCCCCCCCCCCcccccccCCCCCCCCcEEEEEeecccCCCCCCCCCCeeEEecCCCccccccccccc
Q 005257           97 VLAGHGLVFLFVPFHGIKGATEAQHLGLFNRTNDGNSSNHVFGVEFDVFKNQEFNDIDENHVGIDVNSLTSVSAHAAGYW  176 (705)
Q Consensus        97 ~~~g~G~aF~~~~~~~~~~~~~g~~lGl~~~~~~~~~~~~~vaVEFDt~~n~~~~d~~~~Hvgidvns~~S~~~~~~~~~  176 (705)
                      ..+||||||||+|....| ++.|+||||||.+   ++.+|+|||||||++|.+ +||++||||||||++.|.++++    
T Consensus        82 ~~~gdGlAF~l~p~~~~~-~~~g~~LGl~n~~---~~~~~~vAVEFDT~~N~~-~Dp~~nHVGIdvNs~~S~~~~~----  152 (252)
T 1fat_A           82 AGPADGLAFALVPVGSQP-KDKGGFLGLFDGS---NSNFHTVAVEFDTLYNKD-WDPTERHIGIDVNSIRSIKTTR----  152 (252)
T ss_dssp             CBCCEEEEEEEEETTCCC-CCSGGGTTTCCSS---CCCCCCEEEEEECSCCTT-TCCSSCEEEEEESSSSCSEEEE----
T ss_pred             CCCCCcEEEEEccCCCCC-CCCCccccccccC---CccCcEEEEEeecccCCC-CCCCCCeEEEecCCccccceec----
Confidence            778999999999987655 4889999999975   678999999999999998 6999999999999999987743    


Q ss_pred             CCCCCCCCCCCCCCCCCCCccccceeecCCCcceEEEEEe--cCceEEEEEEEccCCCCCCCceeeeecCccccccceec
Q 005257          177 PDNQTDSSGSNSNSGTGDDEKSFKELKLNNGKNYQVWIDY--ADSFINITMVEAGMKRPKRPLLSVPLNLSGVLEDEMYV  254 (705)
Q Consensus       177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~I~Y--~~~~~~v~~~~~~~~~~~~~~ls~~vdl~~~l~~~~~v  254 (705)
                                               ++|.+|+.++|||+|  ..++|+|++...+.  |..|+|+..|||+.+||++|||
T Consensus       153 -------------------------~~l~~G~~~~v~I~Yd~~~~~L~V~l~~~~~--~~~~~ls~~vdL~~~l~e~~~V  205 (252)
T 1fat_A          153 -------------------------WDFVNGENAEVLITYDSSTNLLVASLVYPSQ--KTSFIVSDTVDLKSVLPEWVSV  205 (252)
T ss_dssp             -------------------------CCCCTTCEEEEEEEEETTTTEEEEEEEETTT--TEEEEEEEECCHHHHSCSEEEE
T ss_pred             -------------------------ccccCCCEEEEEEEEeCCCCEEEEEEecCCC--CCcceEEEEechHHhCCCceEE
Confidence                                     357899999999999  45789999987643  5678999999999999999999


Q ss_pred             ccccccccc---cccceeeeeeecccc
Q 005257          255 GFTAATGQL---VESHKILAWSFSNTK  278 (705)
Q Consensus       255 Gfsastg~~---~~~h~i~~wsf~~~~  278 (705)
                      |||||||..   .+.|+|++|+|++..
T Consensus       206 GFSAsTG~~~~~~~~H~IlsWsF~s~l  232 (252)
T 1fat_A          206 GFSATTGINKGNVETNDVLSWSFASKL  232 (252)
T ss_dssp             EEEEEECSSTTBCCCCEEEEEEEEEEE
T ss_pred             EEEeccCCCCcccceEEEEEEEEEeeC
Confidence            999999998   999999999999864

>1gsl_A Griffonia simplicifolia lectin 4; glycoprotein, manganese; HET: FUC GAL MAG NAG BMA; 2.00A {Griffonia simplicifolia} SCOP: b.29.1.1 PDB: 1lec_A* 1led_A*

Probab=100.00  E-value=4.8e-57  Score=455.74  Aligned_cols=219  Identities=29%  Similarity=0.473  Sum_probs=196.2

Q ss_pred             ceeeEEeCCC----C--CCCeEEEcceEeecCcEEecCCC------CCeEEEEEcCCCccccCCCCCcccceEEEEEEEE
Q 005257           24 SAVDFVFNGF----N--SSNLSLYGTATVESRILTLTNST------TFTIGRALYPSKIPTKRPNSSYVYPFSTSFIFAM   91 (705)
Q Consensus        24 ~~~~f~f~~f----~--~~~~~~~g~a~~~~~~l~lt~~~------~~~~Gr~~y~~pv~l~~~~~~~~~sF~t~F~f~i   91 (705)
                      ..++|+|++|    .  ..||+|+|||.+.+|.|+||++.      .+++|||+|++||+||+ .+|+++||+|+|+|.|
T Consensus         2 ~~~~F~f~~F~~~~~~~~~~l~l~GdA~i~~g~l~LT~~~~~~~~~~~~~Gra~y~~Pv~l~~-~tg~vasFsT~F~F~I   80 (243)
T 1gsl_A            2 NTVNFTYPDFWSYSLKNGTEITFLGDATRIPGALQLTKTDANGNPVRSSAGQASYSEPVFLWD-STGKAASFYTSFTFLL   80 (243)
T ss_dssp             CCCEEEESCCCCTTCCTTSSEEEEETCEEETTEEECSCBCTTSCBCSSEEEEEEESSCEECBC-TTSCBCEEEEEEEEEE
T ss_pred             cceEEEcCCCccccCCCCCCEEEccceEecCCcEEecCCccCCcccCCCeEEEEECCCEEccC-CCCCcCceEEEEEEEE
Confidence            3579999999    6  47999999999999999999976      57999999999999999 9999999999999999


Q ss_pred             ecCCCCCCCCceEEEEeeCCCCCCCCCCCcccccccCCC-CCCCCcEEEEEeecccCCCCCCCCCCeeEEecCCCccccc
Q 005257           92 APYKGVLAGHGLVFLFVPFHGIKGATEAQHLGLFNRTND-GNSSNHVFGVEFDVFKNQEFNDIDENHVGIDVNSLTSVSA  170 (705)
Q Consensus        92 ~~~~~~~~g~G~aF~~~~~~~~~~~~~g~~lGl~~~~~~-~~~~~~~vaVEFDt~~n~~~~d~~~~Hvgidvns~~S~~~  170 (705)
                      .++ ...+||||||||+|....| ++.|+||||||.+++ ++..+|+|||||||++|.+|+||++||||||||++.|+++
T Consensus        81 ~~~-~~~~gdGlAF~l~p~~~~~-~~~g~~LGl~n~~~~~~~~~n~~vAVEFDT~~N~~~~Dp~~nHvGIdvns~~S~~~  158 (243)
T 1gsl_A           81 KNY-GAPTADGLAFFLAPVDSSV-KDYGGFLGLFRHETAADPSKNQVVAVEFDTWINKDWNDPPYPHIGIDVNSIVSVAT  158 (243)
T ss_dssp             EES-SSSCBCEEEEEEEETTCCC-CCCGGGTTTSCTTTTTCGGGCCCEEEEEECSCCGGGTCCSSCEEEEEESSSSCSEE
T ss_pred             ecC-CCCCCCCEEEEEecCCCCC-CCCCCcccccccccccCCccCcEEEEEeccccccccCCCCCCceeeccCCccccce
Confidence            987 6678999999999986654 488999999998753 6788999999999999999999999999999999999877


Q ss_pred             ccccccCCCCCCCCCCCCCCCCCCCccccceeecCC---CcceEEEEEe--cCceEEEEEEEccCCCCCCCceeeeecCc
Q 005257          171 HAAGYWPDNQTDSSGSNSNSGTGDDEKSFKELKLNN---GKNYQVWIDY--ADSFINITMVEAGMKRPKRPLLSVPLNLS  245 (705)
Q Consensus       171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~---g~~~~~~I~Y--~~~~~~v~~~~~~~~~~~~~~ls~~vdl~  245 (705)
                      .+                             ++|.+   |+.++|||+|  ..++|+|+|.+.+.   ..|+|+..|||+
T Consensus       159 ~~-----------------------------~~l~~~~~g~~~~v~I~Yd~~~~~L~V~l~~~~~---~~~~ls~~vdL~  206 (243)
T 1gsl_A          159 TR-----------------------------WENDDAYGSSIATAHITYDARSKILTVLLSYEHG---RDYILSHVVDLA  206 (243)
T ss_dssp             EE-----------------------------CCHHHHTSCCEEEEEEEEETTTTEEEEEEEETTS---CEEEEEEECCHH
T ss_pred             ee-----------------------------eEEeccCCCcEEEEEEEEeCCCCEEEEEEecCCC---CceeEEEEechH
Confidence            43                             24666   9999999999  45799999987654   468999999999


Q ss_pred             cccccceecccccccccccccceeeeeeecccc
Q 005257          246 GVLEDEMYVGFTAATGQLVESHKILAWSFSNTK  278 (705)
Q Consensus       246 ~~l~~~~~vGfsastg~~~~~h~i~~wsf~~~~  278 (705)
                      .+||++|||||||||| ..+.|+|++|+|++..
T Consensus       207 ~~l~~~~~vGFSAsTG-~~~~h~IlsWsF~s~l  238 (243)
T 1gsl_A          207 KVLPQKVRIGFSAGVG-YDEVTYILSWHFFSTL  238 (243)
T ss_dssp             HHSCSEEEEEEEEEEC-BSEEEEEEEEEEEEEC
T ss_pred             HhCCCceEEEEEeccC-CcceeEEEEEEEEeec
Confidence            9999999999999999 9999999999999864

>1n47_A Isolectin B4; cancer antigen, vicia villosa lectin, glycoprotein TN-bindin protein, carbohydrate recognition, sugar binding protein; HET: NAG FUC TNR; 2.70A {Vicia villosa} SCOP: b.29.1.1

Probab=100.00  E-value=1.3e-56  Score=450.24  Aligned_cols=217  Identities=30%  Similarity=0.492  Sum_probs=194.5

Q ss_pred             ceeeEEeCCCC--CCCeEEEcceEee-cCcEEecCCC-----CCeEEEEEcCCCccccCCCCCcccceEEEEEEEEecCC
Q 005257           24 SAVDFVFNGFN--SSNLSLYGTATVE-SRILTLTNST-----TFTIGRALYPSKIPTKRPNSSYVYPFSTSFIFAMAPYK   95 (705)
Q Consensus        24 ~~~~f~f~~f~--~~~~~~~g~a~~~-~~~l~lt~~~-----~~~~Gr~~y~~pv~l~~~~~~~~~sF~t~F~f~i~~~~   95 (705)
                      ..++|+|++|+  ..||+|+|||.+. +|.|+||++.     .+++|||+|++||+|||+.+  ++||+|+|+|.|.+++
T Consensus         2 ~~~~F~f~~F~~~~~~l~l~G~A~v~~~g~l~LT~~~~~~~~~~~~Gra~y~~Pi~l~d~~~--~~sFsT~F~F~I~~~~   79 (233)
T 1n47_A            2 ESTSFSFTNFNPNQNNLILQEDALVNSAGTLELTAVAAGAPVPDSLGRALYAAPIHIHDNTT--LASFTTSFSFVMAAPA   79 (233)
T ss_dssp             EEEEEEESSCCTTCTTEEEEETCEECTTSCEESSCBSSSSBCTTCEEEEEESSCEECBCSSC--BCEEEEEEEEECCCSS
T ss_pred             cceEEEcCCCCCCCCCeEEccceEEccCCcEEeccCcCCCccCCCeEEEEECCCEeccCCCC--cCCEEEEEEEEEeCCC
Confidence            46899999998  5899999999996 7999999987     47999999999999999877  9999999999999887


Q ss_pred             CCCCCCceEEEEeeCCCCCCCCCCCcccccccCCCCCCCCcEEEEEeecccCCCCCCCCCCeeEEecCCCcccccccccc
Q 005257           96 GVLAGHGLVFLFVPFHGIKGATEAQHLGLFNRTNDGNSSNHVFGVEFDVFKNQEFNDIDENHVGIDVNSLTSVSAHAAGY  175 (705)
Q Consensus        96 ~~~~g~G~aF~~~~~~~~~~~~~g~~lGl~~~~~~~~~~~~~vaVEFDt~~n~~~~d~~~~Hvgidvns~~S~~~~~~~~  175 (705)
                      ...+||||||||+|....|. +.|+||||||.++ ++..+|+|||||||++|.  +||++||||||+||+.|.++++   
T Consensus        80 ~~~~gdGlAF~l~p~~~~p~-~~g~~LGl~n~~~-~~~~n~~vAVEFDT~~N~--~Dp~~nHvGIdvns~~S~~~~~---  152 (233)
T 1n47_A           80 AAAVADGLAFFLAPPDTQPQ-ARGGFLGLFADRA-HDASYQTVAVEFDTYSNA--WDPNYTHIGIDTNGIESKKTTP---  152 (233)
T ss_dssp             TTSCCEEEEEEEECTTCCCC-CCGGGTTTCSSSS-CCGGGCCEEEEEECSCCT--TSCSSCEEEEEESSSSCSEEEE---
T ss_pred             CCCCCCcEEEEEecCCCCCC-CCCCcccccccCC-CCccCceEEEEeccccCC--CCCCCCcEEEccCCcccccccc---
Confidence            67789999999999876665 8899999999764 578899999999999998  6999999999999999987743   


Q ss_pred             cCCCCCCCCCCCCCCCCCCCccccceeecCCCcceEEEEEe--cCceEEEEEEEccCCCCCCCceeeeecCcccccccee
Q 005257          176 WPDNQTDSSGSNSNSGTGDDEKSFKELKLNNGKNYQVWIDY--ADSFINITMVEAGMKRPKRPLLSVPLNLSGVLEDEMY  253 (705)
Q Consensus       176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~I~Y--~~~~~~v~~~~~~~~~~~~~~ls~~vdl~~~l~~~~~  253 (705)
                                                ++|.+|+.++|||+|  ..++|+|++...+.  +..|+|+..|||+.+|||+||
T Consensus       153 --------------------------~~l~~g~~~~v~I~Yd~~~~~L~V~l~~~~~--~~~~~ls~~vdL~~~l~~~~~  204 (233)
T 1n47_A          153 --------------------------FDMVYGEKANIVITYQASTKALAASLVFPVS--QTSYAVSARVDLRDILPEYVR  204 (233)
T ss_dssp             --------------------------CCCCTTSCEEEEEEEETTTTEEEEEEEETTT--TEEEEEEEECCGGGTSCSEEE
T ss_pred             --------------------------ccccCCCEEEEEEEEeCCCCEEEEEEecCCC--CCcceEEEEechHHhCCCceE
Confidence                                      357799999999999  45789999987543  356899999999999999999


Q ss_pred             cccccccccc---cccceeeeeeeccc
Q 005257          254 VGFTAATGQL---VESHKILAWSFSNT  277 (705)
Q Consensus       254 vGfsastg~~---~~~h~i~~wsf~~~  277 (705)
                      ||||||||..   .+.|+|++|+|+++
T Consensus       205 vGFSAsTG~~~~~~~~h~IlsWsF~s~  231 (233)
T 1n47_A          205 VGFSATTGLNAGVVETHDIVSWSFAVS  231 (233)
T ss_dssp             EEEEEEECSSTTCCCCCEEEEEEEEEE
T ss_pred             EEEEeccCCCccccceeEEEEEEEEee
Confidence            9999999998   99999999999875

>1wbf_A Protein (agglutinin); lectin (agglutinin), legume lectin, protein crystallography, group specificity, saccharide free form; HET: NAG; 2.30A {Psophocarpus tetragonolobus} SCOP: b.29.1.1 PDB: 2d3s_A* 2dtw_A* 1wbl_A* 2dty_A* 2du0_A* 2du1_A* 2e51_A* 2e53_A* 2zmk_A* 2zml_A* 2zmn_A* 2e7t_A* 2e7q_A*

Probab=100.00  E-value=1.7e-56  Score=450.91  Aligned_cols=217  Identities=31%  Similarity=0.500  Sum_probs=194.5

Q ss_pred             ceeeEEeCCCC--CCCeEEEcceEee-cCcEEecCCC-----CCeEEEEEcCCCccccCCCCCcccceEEEEEEEEecC-
Q 005257           24 SAVDFVFNGFN--SSNLSLYGTATVE-SRILTLTNST-----TFTIGRALYPSKIPTKRPNSSYVYPFSTSFIFAMAPY-   94 (705)
Q Consensus        24 ~~~~f~f~~f~--~~~~~~~g~a~~~-~~~l~lt~~~-----~~~~Gr~~y~~pv~l~~~~~~~~~sF~t~F~f~i~~~-   94 (705)
                      ..++|+|++|+  ..||+|+|||.+. +|.|+||++.     .+++|||+|++||+|||+.+|+++||+|+|+|.|.++ 
T Consensus         2 ~~~~F~f~~F~~~~~~l~l~G~A~v~~~g~l~LT~~~~~~~~~~~~Gra~y~~Pv~l~d~~tg~vaSFsT~F~F~I~~~~   81 (242)
T 1wbf_A            2 KTISFNFNQFHQNEEQLKLQRDARISSNSVLELTKVVNGVPTWNSTGRALYAKPVQVWDSTTGNVASFETRFSFSIRQPF   81 (242)
T ss_dssp             CEEEEEESSCCTTCTTEEEEETCEECTTSCEESSCEETTEECSSCEEEEEESSCEECBCTTTCCBCEEEEEEEEECCCSC
T ss_pred             cceEEEcCCCCCCCCCeEEccceEEccCCcEEecCcccCCcccCCeEEEEECCCEecccCCCCCeeeEEEEEEEEEeCCC
Confidence            36799999998  5899999999996 7999999876     6899999999999999999999999999999999887 


Q ss_pred             CCCCCCCceEEEEeeCCCCCCCCCCCcccccccCCCCCCCCcEEEEEeecccCCCCCCCCCCeeEEecCCCccccccccc
Q 005257           95 KGVLAGHGLVFLFVPFHGIKGATEAQHLGLFNRTNDGNSSNHVFGVEFDVFKNQEFNDIDENHVGIDVNSLTSVSAHAAG  174 (705)
Q Consensus        95 ~~~~~g~G~aF~~~~~~~~~~~~~g~~lGl~~~~~~~~~~~~~vaVEFDt~~n~~~~d~~~~Hvgidvns~~S~~~~~~~  174 (705)
                      +...+||||||||+|....| ++.|+||||+|.+    +.+|+|||||||++|.  +||++||||||||++.|.++.+  
T Consensus        82 ~~~~~gdGlAF~l~p~~~~~-~~~g~~LGl~n~~----~~~~~vAVEFDT~~N~--~Dp~~nHVGIdvNs~~S~~~~~--  152 (242)
T 1wbf_A           82 PRPHPADGLVFFIAPPNTQT-GEGGGYFGIYNPL----SPYPFVAVEFDTFRNT--WDPQIPHIGIDVNSVISTKTVP--  152 (242)
T ss_dssp             CSSCCCEEEEEEEECSSCCC-CCCGGGTTTCCTT----SCCCCEEEEEECSCCT--TCCSSSEEEEEESSSSCSEEEE--
T ss_pred             CCCCCCCcEEEEEecCCCCC-CCCCCccccccCC----CcCcEEEEEeccccCC--CCCCCCeEEEECCCccccceee--
Confidence            56678999999999986654 4789999999864    6789999999999998  6999999999999999987743  


Q ss_pred             ccCCCCCCCCCCCCCCCCCCCccccceeecCCCcceEEEEEe--cCceEEEEEEEccCCCCCCCceeeeecCccccccce
Q 005257          175 YWPDNQTDSSGSNSNSGTGDDEKSFKELKLNNGKNYQVWIDY--ADSFINITMVEAGMKRPKRPLLSVPLNLSGVLEDEM  252 (705)
Q Consensus       175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~I~Y--~~~~~~v~~~~~~~~~~~~~~ls~~vdl~~~l~~~~  252 (705)
                                                 ++|.+|+.++|||+|  ..++|+|+++..+.  |..|+|+..|||+.+|||+|
T Consensus       153 ---------------------------~~l~~G~~~~v~I~Yd~~~~~L~V~l~~~~~--~~~~~ls~~vdL~~~l~e~v  203 (242)
T 1wbf_A          153 ---------------------------FTLDNGGIANVVIKYDASTKILHVVLVFPSL--GTIYTIADIVDLKQVLPESV  203 (242)
T ss_dssp             ---------------------------CCCCTTSCEEEEEEEETTTTEEEEEEEETTT--TEEEEEEEECCHHHHSCSEE
T ss_pred             ---------------------------eEecCCCEEEEEEEEeCCCCEEEEEEccCCC--CCcceEEEEechHHhcCCce
Confidence                                       358899999999999  55789999987643  55789999999999999999


Q ss_pred             eccccccc----ccc---cccceeeeeeecccc
Q 005257          253 YVGFTAAT----GQL---VESHKILAWSFSNTK  278 (705)
Q Consensus       253 ~vGfsast----g~~---~~~h~i~~wsf~~~~  278 (705)
                      ||||||||    |..   .|.|+|++|+|++..
T Consensus       204 ~VGFSAsTg~~~G~~~~~~~~h~IlsWsF~s~l  236 (242)
T 1wbf_A          204 NVGFSAATGDPSGKQRNATETHDILSWSFSASL  236 (242)
T ss_dssp             EEEEEEEECCGGGCCTTCCCCCEEEEEEEEEEC
T ss_pred             EEEEEEeecCcCCccccccceEEEEEEEeEecC
Confidence            99999999    888   899999999999864

>1f9k_A Acidic lectin; legume lectin, glycosylated protein, H-antigenic specificity agglutinin, sugar binding protein; HET: NAG MAN AMG; 3.00A {Psophocarpus tetragonolobus} SCOP: b.29.1.1 PDB: 1fay_A*

Probab=100.00  E-value=3.4e-56  Score=448.66  Aligned_cols=216  Identities=31%  Similarity=0.493  Sum_probs=194.2

Q ss_pred             eeeEEeCCCC--CCCeEEEcceEee-cCcEEecCCC------CCeEEEEEcCCCccccCCCCCcccceEEEEEEEEecC-
Q 005257           25 AVDFVFNGFN--SSNLSLYGTATVE-SRILTLTNST------TFTIGRALYPSKIPTKRPNSSYVYPFSTSFIFAMAPY-   94 (705)
Q Consensus        25 ~~~f~f~~f~--~~~~~~~g~a~~~-~~~l~lt~~~------~~~~Gr~~y~~pv~l~~~~~~~~~sF~t~F~f~i~~~-   94 (705)
                      .++|+|++|+  ..||+|+|||.+. +|.|+||++.      .+++|||+|++||+|||+.+|+++||+|+|+|.|.++ 
T Consensus         2 ~~~F~f~~F~~~~~~l~l~G~A~v~~~g~l~LT~~~~~~~~~~~~~Gra~y~~Pv~l~d~~~g~vasFsT~F~F~I~~~~   81 (238)
T 1f9k_A            2 TQSFNFDHFEENSKELNLQRQASIKSNGVLELTKLTKNGVPVWKSTGRALYAEPIKIWDSTTGNVASFETRFSFNITQPY   81 (238)
T ss_dssp             EEEEEESSCCSSCTTEEEEETCEECTTSCEECSCSEETTEECCSCEEEEEESSCEECBCTTTCCBCEEEEEEEEEEECCC
T ss_pred             CeEEEcCCCCCCCCCeEEccceEECcCCcEEecCccccCccccCCEEEEEECCCEEeecCCCCCeeeEEEEEEEEEecCC
Confidence            5799999998  5899999999996 7999999976      5799999999999999999999999999999999987 


Q ss_pred             CCCCCCCceEEEEeeCCCCCCCCCCCcccccccCCCCCCCCcEEEEEeecccCCCCCCCCCCeeEEecCCCccccccccc
Q 005257           95 KGVLAGHGLVFLFVPFHGIKGATEAQHLGLFNRTNDGNSSNHVFGVEFDVFKNQEFNDIDENHVGIDVNSLTSVSAHAAG  174 (705)
Q Consensus        95 ~~~~~g~G~aF~~~~~~~~~~~~~g~~lGl~~~~~~~~~~~~~vaVEFDt~~n~~~~d~~~~Hvgidvns~~S~~~~~~~  174 (705)
                      +...+||||||||+|....| ++.|+||||+|.+   +. +|+|||||||++|.  +||++||||||||++.|.++.+  
T Consensus        82 ~~~~~gdGlAF~l~p~~~~~-~~~g~~LGl~n~~---~~-~~~vAVEFDT~~N~--~Dp~~nHVgIdvns~~S~~s~~--  152 (238)
T 1f9k_A           82 AYPEPADGLTFFMVPPNSPQ-GEDGGNLGVFKPP---EG-DNAFAVEFDTFQNT--WDPQVPHIGIDVNSIVSSKTLH--  152 (238)
T ss_dssp             SSSCCCEEEEEEEECTTCCC-CCSGGGTTTCCSS---CC-SCCEEEEEECSCCT--TCCSSSEEEEEESSSSCSEEEE--
T ss_pred             CCCCCCCcEEEEEccCCCCC-CCCCCcccccccC---CC-CcEEEEEEecccCC--CCCCCCeEEEecCCccccceEe--
Confidence            66778999999999986655 4889999999975   45 99999999999998  6999999999999999987743  


Q ss_pred             ccCCCCCCCCCCCCCCCCCCCccccceeecCCCcceEEEEEe--cCceEEEEEEEccCCCCCCCceeeeecCcccccc--
Q 005257          175 YWPDNQTDSSGSNSNSGTGDDEKSFKELKLNNGKNYQVWIDY--ADSFINITMVEAGMKRPKRPLLSVPLNLSGVLED--  250 (705)
Q Consensus       175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~I~Y--~~~~~~v~~~~~~~~~~~~~~ls~~vdl~~~l~~--  250 (705)
                                                 ++|.+|+.++|||+|  ..++|+|++...+  .|..|+|+..|||+.+||+  
T Consensus       153 ---------------------------~~l~~g~~~~v~I~Yd~~~~~L~V~l~~~~--~~~~~~ls~~vdL~~~l~~~~  203 (238)
T 1f9k_A          153 ---------------------------FQLENGGVANVVIKYDSPTKILNVVLAFHS--VGTVYTLSNIVDLKQEFPNSE  203 (238)
T ss_dssp             ---------------------------CCCCTTCCEEEEEEEETTTTEEEEEEEETT--TTEEEEEEEECCHHHHSTTCS
T ss_pred             ---------------------------ecccCCCEEEEEEEEeCCCCEEEEEEecCC--CCCceeEEEEechHHhCCCCc
Confidence                                       358899999999999  4568999998764  3567899999999999999  


Q ss_pred             ceecccccccccc---cccceeeeeeecccc
Q 005257          251 EMYVGFTAATGQL---VESHKILAWSFSNTK  278 (705)
Q Consensus       251 ~~~vGfsastg~~---~~~h~i~~wsf~~~~  278 (705)
                      +||||||||||..   .+.|+|++|+|++..
T Consensus       204 ~~~vGFSAsTG~~~~~~~~h~IlsWsF~s~~  234 (238)
T 1f9k_A          204 WVNVGLSATTGYQKNAVETHEIISWSFTSSL  234 (238)
T ss_dssp             EEEEEEEEEECSSTTCCCEEEEEEEEEEEEC
T ss_pred             eEEEEEEeCcCCCCcccceEEEEEeEeEeec
Confidence            9999999999998   999999999999764

>1avb_A Arcelin-1; lectin-like glycoprotein, plant defense, insecticidal activi lectin; HET: NAG; 1.90A {Phaseolus vulgaris} SCOP: b.29.1.1

Probab=100.00  E-value=4.6e-56  Score=443.71  Aligned_cols=214  Identities=31%  Similarity=0.495  Sum_probs=192.5

Q ss_pred             ceeeEEeCCCCCCCeEEEcceEee-cCcEEecCC---CCCeEEEEEcCCCccccCCCCCcccceEEEEEEEEecCCCCCC
Q 005257           24 SAVDFVFNGFNSSNLSLYGTATVE-SRILTLTNS---TTFTIGRALYPSKIPTKRPNSSYVYPFSTSFIFAMAPYKGVLA   99 (705)
Q Consensus        24 ~~~~f~f~~f~~~~~~~~g~a~~~-~~~l~lt~~---~~~~~Gr~~y~~pv~l~~~~~~~~~sF~t~F~f~i~~~~~~~~   99 (705)
                      ..++|+|++|+..||+|+|||.+. +|.|+||++   ..+++|||+|++||+|||+.+|+++||+|+|+|.|.+++...+
T Consensus         2 ~~~~F~f~~F~~~~l~l~G~A~v~~~g~l~LT~~~~~~~~~~Gra~y~~Pv~l~~~~~g~vaSFsT~F~F~I~~~~~~~~   81 (226)
T 1avb_A            2 NDASFNVETFNKTNLILQGDATVSSEGHLLLTNVKGNEEDSMGRAFYSAPIQINDRTIDNLASFSTNFTFRINAKNIENS   81 (226)
T ss_dssp             EEEEEEESSCCGGGEEEEETCEECTTSCEECSCSSSCCTTCEEEEEESSCEECEEGGGTEEEEEEEEEEEEEEESSTTSC
T ss_pred             cceEEEcCCCCccCEEEeccEEECCCCEEEeCCCCCCccCCeEEEEeCCCEEeecCCCCCcccEEEEEEEEEeCCCCCCC
Confidence            467999999998999999999996 899999998   7789999999999999999999999999999999998877778


Q ss_pred             CCceEEEEeeCCCCCCCCCCCcccccccCCCCCCCCcEEEEEeecccCCCCCCCCCCeeEEecCCCcccccccccccCCC
Q 005257          100 GHGLVFLFVPFHGIKGATEAQHLGLFNRTNDGNSSNHVFGVEFDVFKNQEFNDIDENHVGIDVNSLTSVSAHAAGYWPDN  179 (705)
Q Consensus       100 g~G~aF~~~~~~~~~~~~~g~~lGl~~~~~~~~~~~~~vaVEFDt~~n~~~~d~~~~Hvgidvns~~S~~~~~~~~~~~~  179 (705)
                      ||||||||+|....|. +.|+||||+|.+ +++..+|+|||||||+         +||||||||+++|+++++   |   
T Consensus        82 gdGlAF~l~p~~~~p~-~~g~~LGl~n~~-~~~~~~~~vAVEFDT~---------~nHVGIdvNs~~S~~t~~---~---  144 (226)
T 1avb_A           82 AYGLAFALVPVGSRPK-LKGRYLGLFNTT-NYDRDAHTVAVVFDTV---------SNRIEIDVNSIRPIATES---C---  144 (226)
T ss_dssp             CEEEEEEEEETTCCCC-CCGGGTTTCSCS-SCCGGGCCEEEEEETT---------TTEEEEEESSSSCSEEEE---C---
T ss_pred             CCcEEEEEecCCCCCC-CCCCcccccccC-CCCCcccEEEEEecCc---------CCccceeecCcccCcccc---C---
Confidence            9999999999876666 889999999976 4577899999999998         689999999999988754   3   


Q ss_pred             CCCCCCCCCCCCCCCCccccceeecCCCcceEEEEEe--cCceEEEEEEEccCCCCCCCceeeeecCccccccceecccc
Q 005257          180 QTDSSGSNSNSGTGDDEKSFKELKLNNGKNYQVWIDY--ADSFINITMVEAGMKRPKRPLLSVPLNLSGVLEDEMYVGFT  257 (705)
Q Consensus       180 ~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~I~Y--~~~~~~v~~~~~~~~~~~~~~ls~~vdl~~~l~~~~~vGfs  257 (705)
                                           ++.|.+|+.++|||+|  ..++|+|++++.+.  ++.|+|+..|||+++|||+||||||
T Consensus       145 ---------------------~~~l~~g~~~~v~I~Yd~~~~~L~V~l~~~~~--~~~~~ls~~vdL~~~l~e~~~VGFS  201 (226)
T 1avb_A          145 ---------------------NFGHNNGEKAEVRITYDSPKNDLRVSLLYPSS--EEKCHVSATVPLEKEVEDWVSVGFS  201 (226)
T ss_dssp             ---------------------CSGGGTTCEEEEEEEEEGGGTEEEEEEEETTT--TEEEEEEEECCHHHHSCSEEEEEEE
T ss_pred             ---------------------CccccCCCeEEEEEEEeCCCcEEEEEEeecCC--CccceEEEEechHHhCCCceEEEEE
Confidence                                 2357799999999999  55689999987643  3478999999999999999999999


Q ss_pred             cccccc---cccceeeeeeeccc
Q 005257          258 AATGQL---VESHKILAWSFSNT  277 (705)
Q Consensus       258 astg~~---~~~h~i~~wsf~~~  277 (705)
                      ||||..   .|.|+|++|+|+++
T Consensus       202 AsTG~~~~~~~~h~IlsWsF~s~  224 (226)
T 1avb_A          202 ATSGSKKETTETHNVLSWSFSSN  224 (226)
T ss_dssp             EEECSSGGGCEEEEEEEEEEEEE
T ss_pred             eccCCCCcccceeEEEEEEEEee
Confidence            999998   99999999999875

>1ioa_A Arcelin-5A, ARC5A; lectin-like proteins, plant defense proteins, lectin; HET: NAG FUC; 2.70A {Phaseolus vulgaris} SCOP: b.29.1.1

Probab=100.00  E-value=1.2e-54  Score=436.82  Aligned_cols=213  Identities=26%  Similarity=0.467  Sum_probs=190.4

Q ss_pred             ceeeEEeCCCCCCC-eEEEcceEee-cCcEEecCCCC------CeEEEEEcCCCccccCCCCCcccceEEEEEEEEecCC
Q 005257           24 SAVDFVFNGFNSSN-LSLYGTATVE-SRILTLTNSTT------FTIGRALYPSKIPTKRPNSSYVYPFSTSFIFAMAPYK   95 (705)
Q Consensus        24 ~~~~f~f~~f~~~~-~~~~g~a~~~-~~~l~lt~~~~------~~~Gr~~y~~pv~l~~~~~~~~~sF~t~F~f~i~~~~   95 (705)
                      ..++|+|++|...| |+|+|||.+. +|.||||++..      +++|||+|++||+|||+.  +++||+|+|+|.|.+++
T Consensus         2 ~~~~F~f~~F~~~~~l~l~G~A~v~~~g~l~LT~~~~~~~~~~~s~Gra~y~~Pi~l~d~~--~vaSFsT~F~F~I~~~~   79 (240)
T 1ioa_A            2 TETSFNFPNFHTDDKLILQGNATISSKGQLQLTGVGSNELPRVDSLGRAFYSDPIQIKDSN--NVASFNTNFTFIIRAKN   79 (240)
T ss_dssp             CCCEEEESSCCTTSSEEEEETCEECTTSCEETTCBCTTSSBCSSCBEEEEESSCEECBCSS--CBEEEEEEEEEECCBSC
T ss_pred             cceEEEcCCCCCCCcEEEccceEECCCCeEEeCCCCCCCccccCceEEEEECCCEEccCCC--ccccEEEEEEEEEeCCC
Confidence            35799999999889 9999999996 89999998876      799999999999999986  89999999999999887


Q ss_pred             CCCCCCceEEEEeeCCCCCCCCCCCcccccccCCCCCCCCcEEEEEeecccCCCCCCCCCCeeEEecCCCcccccccccc
Q 005257           96 GVLAGHGLVFLFVPFHGIKGATEAQHLGLFNRTNDGNSSNHVFGVEFDVFKNQEFNDIDENHVGIDVNSLTSVSAHAAGY  175 (705)
Q Consensus        96 ~~~~g~G~aF~~~~~~~~~~~~~g~~lGl~~~~~~~~~~~~~vaVEFDt~~n~~~~d~~~~Hvgidvns~~S~~~~~~~~  175 (705)
                      ...+||||||||+|....|. +.||||||||.+ +++..+|+|||||||+         +||||||||+++|+++++   
T Consensus        80 ~~~~gdGlAF~l~p~~~~p~-~~g~~LGL~n~~-~~~~~~~~vAVEFDT~---------~nHVGIdvNs~~S~~t~~---  145 (240)
T 1ioa_A           80 QSISAYGLAFALVPVNSPPQ-KKQEFLGIFNTN-NPEPNARTVAVVFNTF---------KNRIDFDKNFIKPYVNEN---  145 (240)
T ss_dssp             TTSCCEEEEEEEEETTCCCC-CCGGGTTTCCCS-SCCGGGCCEEEEEETT---------TTEEEEEESSSSCSEEEE---
T ss_pred             CCCCCCcEEEEEecCCCCCC-CCCCcccccccC-CCCCcCcEEEEEecCc---------CCceeeeeCCcccccccc---
Confidence            77789999999999877666 889999999975 4577899999999998         689999999999988754   


Q ss_pred             cCCCCCCCCCCCCCCCCCCCccccceeecCCCcceEEEEEe--cCceEEEEEEEccCCCCCCCceeeeecCcccccccee
Q 005257          176 WPDNQTDSSGSNSNSGTGDDEKSFKELKLNNGKNYQVWIDY--ADSFINITMVEAGMKRPKRPLLSVPLNLSGVLEDEMY  253 (705)
Q Consensus       176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~I~Y--~~~~~~v~~~~~~~~~~~~~~ls~~vdl~~~l~~~~~  253 (705)
                      |                        ++.|.+|+.++|||+|  ..+.|+|++++.+.  ++.|+|+..|||+++|||+||
T Consensus       146 ~------------------------~~~l~~g~~~~v~I~Yd~~~~~L~V~l~~~~~--~~~~~ls~~vdL~~~l~e~v~  199 (240)
T 1ioa_A          146 C------------------------DFHKYNGEKTDVQITYDSSNNDLRVFLHFTVS--QVKCSVSATVHLEKEVDEWVS  199 (240)
T ss_dssp             C------------------------CHHHHCSSCEEEEEEEETTTTEEEEEEEETTT--CCEEEEEEECCGGGTSCSEEE
T ss_pred             C------------------------CccccCCCEEEEEEEEeCCCcEEEEEEecCCC--CccceeEEEechHHhCCCceE
Confidence            3                        2356799999999999  55789999987643  457899999999999999999


Q ss_pred             cccccccccc---cccceeeeeeecccc
Q 005257          254 VGFTAATGQL---VESHKILAWSFSNTK  278 (705)
Q Consensus       254 vGfsastg~~---~~~h~i~~wsf~~~~  278 (705)
                      ||||||||..   .|.|+|++|+|++..
T Consensus       200 VGFSAsTG~~~~~~~~H~IlsWsF~s~~  227 (240)
T 1ioa_A          200 VGFSPTSGLTEDTTETHDVLSWSFSSKF  227 (240)
T ss_dssp             EEEEEEECSSTTTCBCCEEEEEEEEEEE
T ss_pred             EEEEeccCCCCcccceeEEEEEEEEeeC
Confidence            9999999998   999999999999864

>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*

Probab=100.00  E-value=3.4e-54  Score=453.56  Aligned_cols=262  Identities=23%  Similarity=0.432  Sum_probs=217.7

Q ss_pred             CCCCcceEEeecCceEEEEEEEc-----CCCeEEEEEEeccCCchhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceE
Q 005257          364 KGFSEENVIGVGGNGKVYKGVLE-----GGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLM  438 (705)
Q Consensus       364 ~~f~~~~~LG~G~fg~Vy~~~~~-----~~~~~vavK~i~~~~~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~  438 (705)
                      ++|...+.||+|+||+||+|.+.     .++..||||+++.......++|.+|+++|++|+|||||+++|+|.+ ++.++
T Consensus        13 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~-~~~~~   91 (299)
T 4asz_A           13 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVE-GDPLI   91 (299)
T ss_dssp             GGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSSEE
T ss_pred             HHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCChHHHHHHHHHHHHHHhCCCCCCccEEEEEee-CCEEE
Confidence            45677899999999999999975     3578899999987777778899999999999999999999999986 67899


Q ss_pred             EEEeeCCCCChhHHHHhcC----------CCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCee
Q 005257          439 LVYDYMENGSLDKWIFQCD----------GSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGR  508 (705)
Q Consensus       439 lV~E~~~~gsL~~~L~~~~----------~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~k  508 (705)
                      ||||||++|+|.++|++..          ....++|.++++|+.|||.||.|||+   ++||||||||+||||++++.+|
T Consensus        92 lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~---~~iiHRDlKp~NILl~~~~~~K  168 (299)
T 4asz_A           92 MVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLAS---QHFVHRDLATRNCLVGENLLVK  168 (299)
T ss_dssp             EEEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECGGGCEE
T ss_pred             EEEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHh---CCcccCccCHhhEEECCCCcEE
Confidence            9999999999999997642          23469999999999999999999998   9999999999999999999999


Q ss_pred             eeeeccceecCCCCcce-eeeeeccccCCCccccccCCCCccccEEEEehhHHHHhh-CCCCCCCCCccHHHHHHHHHHh
Q 005257          509 LGDFGLARMHGHGQVAS-TTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLS-GRRPIEEGKPNLVEMVWELMVQ  586 (705)
Q Consensus       509 L~DFGla~~~~~~~~~~-~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~Ellt-G~~Pf~~~~~~~~~~v~~~~~~  586 (705)
                      |+|||+|+......... .....||+.|||||++.+..++.++|||||||++|||+| |+.||.....   ..+...+..
T Consensus       169 i~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~~---~~~~~~i~~  245 (299)
T 4asz_A          169 IGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSN---NEVIECITQ  245 (299)
T ss_dssp             ECCCSCHHHHTGGGCEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCH---HHHHHHHHH
T ss_pred             ECCcccceecCCCCceeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCH---HHHHHHHHc
Confidence            99999998765433222 233579999999999999999999999999999999998 8999987543   222333333


Q ss_pred             CchhHHHHHhhhcCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHhccccC
Q 005257          587 GKLLDALDARLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLEGKIEAG  643 (705)
Q Consensus       587 ~~~~~~id~~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~~~  643 (705)
                      +..           ...+..+++.+.+++..||+.||++||||.||.+.|+...+..
T Consensus       246 ~~~-----------~~~p~~~~~~~~~li~~cl~~dP~~RPs~~~i~~~L~~~~~~~  291 (299)
T 4asz_A          246 GRV-----------LQRPRTCPQEVYELMLGCWQREPHMRKNIKGIHTLLQNLAKAS  291 (299)
T ss_dssp             TCC-----------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHS
T ss_pred             CCC-----------CCCCccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhcC
Confidence            322           2233445567899999999999999999999999998766533

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}

Probab=100.00  E-value=1.7e-53  Score=454.21  Aligned_cols=260  Identities=23%  Similarity=0.397  Sum_probs=211.3

Q ss_pred             CCCCcceEEeecCceEEEEEEEcC-----CCeEEEEEEeccCCchhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceE
Q 005257          364 KGFSEENVIGVGGNGKVYKGVLEG-----GGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLM  438 (705)
Q Consensus       364 ~~f~~~~~LG~G~fg~Vy~~~~~~-----~~~~vavK~i~~~~~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~  438 (705)
                      ++|...++||+|+||+||+|.++.     +++.||||+++.......++|.+|+++|++++|||||+++|+|.+ .+.++
T Consensus        41 ~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~-~~~~~  119 (329)
T 4aoj_A           41 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTE-GRPLL  119 (329)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSSEE
T ss_pred             HHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEE-CCEEE
Confidence            346678899999999999999753     578999999987777778899999999999999999999999986 67899


Q ss_pred             EEEeeCCCCChhHHHHhcCC------------CCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCC
Q 005257          439 LVYDYMENGSLDKWIFQCDG------------SMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMN  506 (705)
Q Consensus       439 lV~E~~~~gsL~~~L~~~~~------------~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~  506 (705)
                      ||||||++|+|.++|++...            ..+++|.++++|+.|||.||.|||+   ++||||||||+||||++++.
T Consensus       120 lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~---~~iiHRDLKp~NILl~~~~~  196 (329)
T 4aoj_A          120 MVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAG---LHFVHRDLATRNCLVGQGLV  196 (329)
T ss_dssp             EEEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEEETTTE
T ss_pred             EEEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhc---CCeecccccHhhEEECCCCc
Confidence            99999999999999976432            2369999999999999999999998   99999999999999999999


Q ss_pred             eeeeeeccceecCCCCc-ceeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhh-CCCCCCCCCccHHHHHHHHH
Q 005257          507 GRLGDFGLARMHGHGQV-ASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLS-GRRPIEEGKPNLVEMVWELM  584 (705)
Q Consensus       507 ~kL~DFGla~~~~~~~~-~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~Ellt-G~~Pf~~~~~~~~~~v~~~~  584 (705)
                      +||+|||+|+....... .......||+.|||||++.+..++.++|||||||+||||+| |+.||.....   ..+...+
T Consensus       197 ~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~~---~~~~~~i  273 (329)
T 4aoj_A          197 VKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSN---TEAIDCI  273 (329)
T ss_dssp             EEECCCC----------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSSCH---HHHHHHH
T ss_pred             EEEcccccceeccCCCcceecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCCCCH---HHHHHHH
Confidence            99999999987654332 23344689999999999999999999999999999999999 8999986543   2222333


Q ss_pred             HhCchhHHHHHhhhcCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHhccc
Q 005257          585 VQGKLLDALDARLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLEGKIE  641 (705)
Q Consensus       585 ~~~~~~~~id~~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~  641 (705)
                      ..+..           ...+..+++.+.+|+..||+.||++||||.||++.|+.+.+
T Consensus       274 ~~g~~-----------~~~p~~~~~~~~~li~~cl~~dP~~RPs~~ei~~~L~~l~~  319 (329)
T 4aoj_A          274 TQGRE-----------LERPRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQALAQ  319 (329)
T ss_dssp             HHTCC-----------CCCCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHHHHHHHHH
T ss_pred             HcCCC-----------CCCcccccHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHhh
Confidence            33321           22334455678999999999999999999999999998776

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*

Probab=100.00  E-value=3.3e-53  Score=450.98  Aligned_cols=274  Identities=20%  Similarity=0.247  Sum_probs=219.4

Q ss_pred             CCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCCchhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEEEEee
Q 005257          364 KGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDY  443 (705)
Q Consensus       364 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~lV~E~  443 (705)
                      +.|...++||+|+||+||+|+++.+|+.||||+++....     ..+|+.++++|+|||||++++++.+ ++.+||||||
T Consensus        58 ~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~-----~~~E~~il~~l~HpnIV~l~~~~~~-~~~~~ivmEy  131 (336)
T 4g3f_A           58 HWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF-----RVEELVACAGLSSPRIVPLYGAVRE-GPWVNIFMEL  131 (336)
T ss_dssp             TEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC-----CTHHHHTTTTCCCTTBCCEEEEEEE-TTEEEEEECC
T ss_pred             hheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHHh-----HHHHHHHHHhCCCCCCCcEEEEEEE-CCEEEEEEec
Confidence            457778899999999999999999999999999975432     2469999999999999999999876 6789999999


Q ss_pred             CCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCC-CeeeeeeccceecCCCC
Q 005257          444 MENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEM-NGRLGDFGLARMHGHGQ  522 (705)
Q Consensus       444 ~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~-~~kL~DFGla~~~~~~~  522 (705)
                      |++|+|.++|.+.+   .+++.++..++.||+.||+|||+   ++||||||||+||||+.++ .+||+|||+|+......
T Consensus       132 ~~gg~L~~~l~~~~---~l~e~~~~~~~~qi~~aL~ylH~---~~IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~~~  205 (336)
T 4g3f_A          132 LEGGSLGQLIKQMG---CLPEDRALYYLGQALEGLEYLHT---RRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDG  205 (336)
T ss_dssp             CTTCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHT---TTEECSCCCGGGEEECTTSCCEEECCCTTCEEC----
T ss_pred             cCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHH---CCceecccCHHHEEEeCCCCEEEEeeCCCCeEccCCC
Confidence            99999999997654   69999999999999999999998   9999999999999999987 59999999999775433


Q ss_pred             cce----eeeeeccccCCCccccccCCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhHHHHHhhh
Q 005257          523 VAS----TTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDARLR  598 (705)
Q Consensus       523 ~~~----~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~l~  598 (705)
                      ...    ....+||+.|||||++.+..++.++|||||||++|||+||+.||.......   +...+..+...      . 
T Consensus       206 ~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~---~~~~i~~~~~~------~-  275 (336)
T 4g3f_A          206 LGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGP---LCLKIASEPPP------I-  275 (336)
T ss_dssp             --------CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCSC---CHHHHHHSCCG------G-
T ss_pred             cccceecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHH---HHHHHHcCCCC------c-
Confidence            211    223579999999999999999999999999999999999999997654321   01111111110      0 


Q ss_pred             cCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHhccccCCCCCcchhhHHHHHHhhccccccccccccccCCCC
Q 005257          599 AKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLEGKIEAGIENETEDMDAYLLQQVKSKDMWANYSRSFGYGYAT  678 (705)
Q Consensus       599 ~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~  678 (705)
                        ...+......+.+++..||+.||++|||+.|+++.|...++                               ...++.
T Consensus       276 --~~~~~~~s~~~~~li~~~L~~dP~~R~sa~el~~~l~~~l~-------------------------------~~~~l~  322 (336)
T 4g3f_A          276 --REIPPSCAPLTAQAIQEGLRKEPVHRASAMELRRKVGKALQ-------------------------------EVGGLK  322 (336)
T ss_dssp             --GGSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH-------------------------------HTTSSC
T ss_pred             --hhcCccCCHHHHHHHHHHccCCHhHCcCHHHHHHHHHHHHh-------------------------------hhhhcc
Confidence              11233345678899999999999999999999998874433                               123589


Q ss_pred             CCCccccccccccc
Q 005257          679 HPTFHDIRQSNSYS  692 (705)
Q Consensus       679 hp~f~~~~~~~~~~  692 (705)
                      |||+.+.+...++|
T Consensus       323 hPw~~~~~~Pr~ns  336 (336)
T 4g3f_A          323 SPWKGEYKEPRGNS  336 (336)
T ss_dssp             SCSSSSCCCCCC--
T ss_pred             CCCcCCCCCCCCCC
Confidence            99998877655543

>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A

Probab=100.00  E-value=4.4e-53  Score=446.94  Aligned_cols=255  Identities=24%  Similarity=0.382  Sum_probs=211.0

Q ss_pred             CCcceEEeecCceEEEEEEEc-----CCCeEEEEEEeccCC-chhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEE
Q 005257          366 FSEENVIGVGGNGKVYKGVLE-----GGGAEIAVKRISHEN-DGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLML  439 (705)
Q Consensus       366 f~~~~~LG~G~fg~Vy~~~~~-----~~~~~vavK~i~~~~-~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~l  439 (705)
                      ++..++||+|+||+||+|.+.     .+++.||||+++... ....++|.+|+.++++++|||||+++|+|.. ++.++|
T Consensus        28 ~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~-~~~~~l  106 (308)
T 4gt4_A           28 VRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTK-DQPLSM  106 (308)
T ss_dssp             EEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSSCEE
T ss_pred             CeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCCCCCCCCcceEEEE-CCEEEE
Confidence            455788999999999999974     356889999997553 3446789999999999999999999999986 678899


Q ss_pred             EEeeCCCCChhHHHHhcCC-------------CCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCC
Q 005257          440 VYDYMENGSLDKWIFQCDG-------------SMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMN  506 (705)
Q Consensus       440 V~E~~~~gsL~~~L~~~~~-------------~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~  506 (705)
                      |||||++|+|.++|.....             ...++|.++++|+.|||.||+|||+   ++||||||||+||||+++++
T Consensus       107 V~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~---~~iiHRDLK~~NILl~~~~~  183 (308)
T 4gt4_A          107 IFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSS---HHVVHKDLATRNVLVYDKLN  183 (308)
T ss_dssp             EEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECGGGC
T ss_pred             EEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHh---CCCCCCCccccceEECCCCC
Confidence            9999999999999975321             1358999999999999999999999   99999999999999999999


Q ss_pred             eeeeeeccceecCCCCc-ceeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhh-CCCCCCCCCccHHHHHHHHH
Q 005257          507 GRLGDFGLARMHGHGQV-ASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLS-GRRPIEEGKPNLVEMVWELM  584 (705)
Q Consensus       507 ~kL~DFGla~~~~~~~~-~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~Ellt-G~~Pf~~~~~~~~~~v~~~~  584 (705)
                      +||+|||+|+....... .......||+.|||||++.++.++.++|||||||+||||+| |+.||.+...   ..+...+
T Consensus       184 ~Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~~---~~~~~~i  260 (308)
T 4gt4_A          184 VKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSN---QDVVEMI  260 (308)
T ss_dssp             EEECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTCCH---HHHHHHH
T ss_pred             EEECCcccceeccCCCceeEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCCCCH---HHHHHHH
Confidence            99999999987644322 22344689999999999999999999999999999999998 8999987543   2223333


Q ss_pred             HhCchhHHHHHhhhcCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHh
Q 005257          585 VQGKLLDALDARLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLEG  638 (705)
Q Consensus       585 ~~~~~~~~id~~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  638 (705)
                      ..+..           ...+.+++..+.+|+..||+.||++||||.||++.|+.
T Consensus       261 ~~~~~-----------~~~p~~~~~~~~~li~~C~~~dP~~RPs~~ei~~~L~a  303 (308)
T 4gt4_A          261 RNRQV-----------LPCPDDCPAWVYALMIECWNEFPSRRPRFKDIHSRLRA  303 (308)
T ss_dssp             HTTCC-----------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHT
T ss_pred             HcCCC-----------CCCcccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHh
Confidence            33322           22344556778999999999999999999999999984

>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}

Probab=100.00  E-value=1e-52  Score=442.87  Aligned_cols=260  Identities=26%  Similarity=0.423  Sum_probs=206.5

Q ss_pred             hCCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccC--CchhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEEE
Q 005257          363 TKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHE--NDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLV  440 (705)
Q Consensus       363 t~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~--~~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~lV  440 (705)
                      .+++...++||+|+||+||+|++++   .||||+++..  ..+..+.|.+|+++|++++|||||+++|+|.+  +.++||
T Consensus        35 ~~~l~l~~~iG~G~fG~Vy~~~~~~---~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~--~~~~iV  109 (307)
T 3omv_A           35 ASEVMLSTRIGSGSFGTVYKGKWHG---DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK--DNLAIV  109 (307)
T ss_dssp             TTSCCEEEECCCCSSSEEEEEESSS---EEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS--SSCEEE
T ss_pred             HHHeEEeeEEeeCCCcEEEEEEECC---cEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEC--CeEEEE
Confidence            3567788999999999999998753   5999998654  34456789999999999999999999998864  568999


Q ss_pred             EeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecCC
Q 005257          441 YDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGH  520 (705)
Q Consensus       441 ~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~~  520 (705)
                      ||||++|+|.++|+..+.  .+++.++++|+.|||.||+|||+   ++||||||||+||||++++++||+|||+|+....
T Consensus       110 mEy~~gGsL~~~l~~~~~--~l~~~~~~~i~~qia~gL~yLH~---~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~  184 (307)
T 3omv_A          110 TQWCEGSSLYKHLHVQET--KFQMFQLIDIARQTAQGMDYLHA---KNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSR  184 (307)
T ss_dssp             EECCSSCBHHHHHHTSCC--CCCHHHHHHHHHHHHHHHHHHHH---TTCBCSCCCSSSEEEETTEEEEECCCSSCBC---
T ss_pred             EEcCCCCCHHHHHhhcCC--CCCHHHHHHHHHHHHHHHHHHHH---CCccCCccCHHHEEECCCCcEEEeeccCceeccc
Confidence            999999999999976543  69999999999999999999998   9999999999999999999999999999987654


Q ss_pred             CC-cceeeeeeccccCCCcccccc---CCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhHHHHHh
Q 005257          521 GQ-VASTTRVVGTVGYLAPEVFSS---GRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDAR  596 (705)
Q Consensus       521 ~~-~~~~~~~~gt~~y~APE~~~~---~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~  596 (705)
                      .. .......+||+.|||||++.+   ++++.++|||||||+||||+||+.||......  ..+...+..+...    +.
T Consensus       185 ~~~~~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~~--~~~~~~~~~~~~~----p~  258 (307)
T 3omv_A          185 WSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNR--DQIIFMVGRGYAS----PD  258 (307)
T ss_dssp             ---------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCH--HHHHHHHHTTCCC----CC
T ss_pred             CCcceeecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCChH--HHHHHHHhcCCCC----CC
Confidence            32 223445689999999999864   46899999999999999999999999764431  2222222222111    00


Q ss_pred             hhcCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHhccc
Q 005257          597 LRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLEGKIE  641 (705)
Q Consensus       597 l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~  641 (705)
                      +   ...+.+++..+.+++..||+.||++||||.||++.|+.+..
T Consensus       259 ~---~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~Le~l~~  300 (307)
T 3omv_A          259 L---SKLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQH  300 (307)
T ss_dssp             S---TTSCTTSCHHHHHHHHHHTCSSSTTSCCHHHHHHHHHHHHT
T ss_pred             c---ccccccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhc
Confidence            0   12233455778999999999999999999999999875533

>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...

Probab=100.00  E-value=9.2e-53  Score=442.45  Aligned_cols=249  Identities=22%  Similarity=0.344  Sum_probs=211.3

Q ss_pred             CCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccC---CchhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEEE
Q 005257          364 KGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHE---NDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLV  440 (705)
Q Consensus       364 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~---~~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~lV  440 (705)
                      ++|+..+.||+|+||+||+|+++.+++.||||++.+.   .....+.+.+|+++|++|+|||||++++++.+ ++.+|||
T Consensus        32 ~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~-~~~~yiv  110 (311)
T 4aw0_A           32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQD-DEKLYFG  110 (311)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEEC-SSEEEEE
T ss_pred             cccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEe-CCEEEEE
Confidence            4588899999999999999999999999999999753   23446779999999999999999999998876 6789999


Q ss_pred             EeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecCC
Q 005257          441 YDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGH  520 (705)
Q Consensus       441 ~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~~  520 (705)
                      |||+++|+|.++|.+.+   .+++.++..++.||+.||+|||+   ++|+||||||+||||+.++.+||+|||+|+....
T Consensus       111 mEy~~gG~L~~~i~~~~---~l~e~~~~~~~~qi~~al~ylH~---~~IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~  184 (311)
T 4aw0_A          111 LSYAKNGELLKYIRKIG---SFDETCTRFYTAEIVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSP  184 (311)
T ss_dssp             ECCCTTEEHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTSCEEECCCTTCEECCT
T ss_pred             EecCCCCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHH---CCCccCCCCHHHeEEcCCCCEEEEEcCCceecCC
Confidence            99999999999997654   69999999999999999999999   9999999999999999999999999999998754


Q ss_pred             CC-cceeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhHHHHHhhhc
Q 005257          521 GQ-VASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRA  599 (705)
Q Consensus       521 ~~-~~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~l~~  599 (705)
                      .. .......+||+.|||||++.+..|+.++||||+||++|||+||+.||.....   ..+...+..+.           
T Consensus       185 ~~~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~---~~~~~~i~~~~-----------  250 (311)
T 4aw0_A          185 ESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNE---GLIFAKIIKLE-----------  250 (311)
T ss_dssp             TTTCCCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCSSH---HHHHHHHHHTC-----------
T ss_pred             CCCcccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCH---HHHHHHHHcCC-----------
Confidence            33 2334557999999999999999999999999999999999999999986543   12222222222           


Q ss_pred             CCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHH
Q 005257          600 KGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVK  634 (705)
Q Consensus       600 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~  634 (705)
                       ..++......+.+++..||+.||++|||+.|++.
T Consensus       251 -~~~p~~~s~~~~dli~~lL~~dp~~R~t~~e~~~  284 (311)
T 4aw0_A          251 -YDFPEKFFPKARDLVEKLLVLDATKRLGCEEMEG  284 (311)
T ss_dssp             -CCCCTTCCHHHHHHHHHHSCSSGGGSTTSGGGTC
T ss_pred             -CCCCcccCHHHHHHHHHHccCCHhHCcChHHHcC
Confidence             2233334456889999999999999999887543

>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*

Probab=100.00  E-value=4.4e-52  Score=447.03  Aligned_cols=270  Identities=25%  Similarity=0.370  Sum_probs=223.1

Q ss_pred             HHHHHHhCCCCcceEEeecCceEEEEEEEcCC-----CeEEEEEEeccCCc-hhHHHHHHHHHHhccCCC-CCcceeeee
Q 005257          357 QEIEAATKGFSEENVIGVGGNGKVYKGVLEGG-----GAEIAVKRISHEND-GGTRAFLAEISSLGRLKH-KSLVGLRGW  429 (705)
Q Consensus       357 ~el~~at~~f~~~~~LG~G~fg~Vy~~~~~~~-----~~~vavK~i~~~~~-~~~~~~~~Ei~~l~~l~H-pniv~l~g~  429 (705)
                      ++++...++|+..+.||+|+||+||+|.+...     ++.||||+++.... ...+.|.+|+++|.+++| ||||+++|+
T Consensus        57 ~~wEi~~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~l~g~  136 (353)
T 4ase_A           57 SKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGA  136 (353)
T ss_dssp             HHHBCCGGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEE
T ss_pred             cccEecHHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEEEEEE
Confidence            44556677899999999999999999998653     36899999976543 446789999999999965 899999999


Q ss_pred             eeeccCceEEEEeeCCCCChhHHHHhcCC-------------CCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 005257          430 CKREKGSLMLVYDYMENGSLDKWIFQCDG-------------SMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKS  496 (705)
Q Consensus       430 ~~~~~~~~~lV~E~~~~gsL~~~L~~~~~-------------~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp  496 (705)
                      |.+.++.++||||||++|+|.++|+....             ...+++.+++.++.|||.||+|||+   ++||||||||
T Consensus       137 ~~~~~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~---~~iiHRDLK~  213 (353)
T 4ase_A          137 CTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLAS---RKCIHRDLAA  213 (353)
T ss_dssp             ECCTTSCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSG
T ss_pred             EEecCCEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhh---CCeecCccCc
Confidence            98766778999999999999999976321             2358999999999999999999999   9999999999


Q ss_pred             CCeEEccCCCeeeeeeccceecCCCCc-ceeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhh-CCCCCCCCCc
Q 005257          497 SNVLLDKEMNGRLGDFGLARMHGHGQV-ASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLS-GRRPIEEGKP  574 (705)
Q Consensus       497 ~NILld~~~~~kL~DFGla~~~~~~~~-~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~Ellt-G~~Pf~~~~~  574 (705)
                      +|||+++++.+||+|||+|+....... .......||+.|||||++.+..++.++|||||||+||||+| |+.||.+...
T Consensus       214 ~NILl~~~~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~~~~  293 (353)
T 4ase_A          214 RNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKI  293 (353)
T ss_dssp             GGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCC
T ss_pred             cceeeCCCCCEEECcchhhhhcccCCCceeeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhCCCCCCCCCCH
Confidence            999999999999999999997654433 23445789999999999999999999999999999999998 9999986543


Q ss_pred             cHHHHHHHHHHhCchhHHHHHhhhcCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHhcccc
Q 005257          575 NLVEMVWELMVQGKLLDALDARLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLEGKIEA  642 (705)
Q Consensus       575 ~~~~~v~~~~~~~~~~~~id~~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~~  642 (705)
                      .  +.+...+..+..           ...+..+...+.+++..||+.||++|||+.|++++|+.+++.
T Consensus       294 ~--~~~~~~i~~g~~-----------~~~p~~~~~~~~~li~~c~~~dP~~RPt~~eil~~L~~llq~  348 (353)
T 4ase_A          294 D--EEFCRRLKEGTR-----------MRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQA  348 (353)
T ss_dssp             S--HHHHHHHHHTCC-----------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             H--HHHHHHHHcCCC-----------CCCCccCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHHHH
Confidence            2  222333333321           222334456788999999999999999999999999987763

>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*

Probab=100.00  E-value=5.2e-52  Score=443.78  Aligned_cols=252  Identities=25%  Similarity=0.392  Sum_probs=206.8

Q ss_pred             CCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccC--CchhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEEEE
Q 005257          364 KGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHE--NDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVY  441 (705)
Q Consensus       364 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~--~~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~lV~  441 (705)
                      ++|+..+.||+|+||+||+|++..+|+.||||++...  .....+.+.+|+++|++|+|||||++++++.+ ++.+||||
T Consensus        24 e~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~-~~~~yiVm  102 (350)
T 4b9d_A           24 EKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEE-NGSLYIVM  102 (350)
T ss_dssp             CCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEE-TTEEEEEE
T ss_pred             cceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEE-CCEEEEEE
Confidence            5799999999999999999999999999999999765  33456789999999999999999999999876 77899999


Q ss_pred             eeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecCCC
Q 005257          442 DYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHG  521 (705)
Q Consensus       442 E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~~~  521 (705)
                      |||++|+|.++|...+.. .+++.+++.++.||+.||.|||+   ++||||||||+||||+.++.+||+|||+|+.....
T Consensus       103 Ey~~gg~L~~~i~~~~~~-~~~e~~~~~~~~qi~~aL~ylH~---~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~  178 (350)
T 4b9d_A          103 DYCEGGDLFKRINAQKGV-LFQEDQILDWFVQICLALKHVHD---RKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNST  178 (350)
T ss_dssp             ECCTTCBHHHHHHHTTTC-CCCHHHHHHHHHHHHHHHHHHHH---TTCEETTCCGGGEEECTTCCEEECSTTEESCCCHH
T ss_pred             eCCCCCcHHHHHHHcCCC-CCCHHHHHHHHHHHHHHHHHHHH---CCeeeccCCHHHEEECCCCCEEEcccccceeecCC
Confidence            999999999999765433 68999999999999999999999   99999999999999999999999999999876432


Q ss_pred             CcceeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhHHHHHhhhcCC
Q 005257          522 QVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRAKG  601 (705)
Q Consensus       522 ~~~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~l~~~~  601 (705)
                      . ...+..+||+.|||||++.+..|+.++|||||||++|||+||+.||.....  .+ +...+..+..           .
T Consensus       179 ~-~~~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~--~~-~~~~i~~~~~-----------~  243 (350)
T 4b9d_A          179 V-ELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSM--KN-LVLKIISGSF-----------P  243 (350)
T ss_dssp             H-HHHHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSH--HH-HHHHHHHTCC-----------C
T ss_pred             c-ccccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCH--HH-HHHHHHcCCC-----------C
Confidence            2 122346899999999999999999999999999999999999999986542  12 2222222221           1


Q ss_pred             CCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 005257          602 GFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKV  635 (705)
Q Consensus       602 ~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  635 (705)
                      ..+......+.+++..||+.||++|||+.|++++
T Consensus       244 ~~~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~h  277 (350)
T 4b9d_A          244 PVSLHYSYDLRSLVSQLFKRNPRDRPSVNSILEK  277 (350)
T ss_dssp             CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred             CCCccCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence            1223344568899999999999999999999873

>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*

Probab=100.00  E-value=8.4e-52  Score=441.49  Aligned_cols=251  Identities=22%  Similarity=0.328  Sum_probs=212.2

Q ss_pred             CCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCCchhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEEEEee
Q 005257          364 KGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDY  443 (705)
Q Consensus       364 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~lV~E~  443 (705)
                      +.|+..++||+|+||+||+|+++.+|+.||||+++.......+.+.+|+++|++++|||||++++++.. ++.+||||||
T Consensus        74 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~-~~~~~ivmEy  152 (346)
T 4fih_A           74 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLV-GDELWVVMEF  152 (346)
T ss_dssp             GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSSGGGGHHHHHHHHHCCCTTBCCEEEEEEE-TTEEEEEECC
T ss_pred             HhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEE-CCEEEEEEeC
Confidence            458889999999999999999999999999999977665666778999999999999999999999886 6789999999


Q ss_pred             CCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecCCCCc
Q 005257          444 MENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQV  523 (705)
Q Consensus       444 ~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~~~~~  523 (705)
                      |++|+|.+++.+.    .+++.++..++.||+.||+|||+   ++||||||||+||||+.++.+||+|||+|+.......
T Consensus       153 ~~gg~L~~~l~~~----~l~e~~~~~~~~qi~~aL~ylH~---~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~  225 (346)
T 4fih_A          153 LEGGALTDIVTHT----RMNEEQIAAVCLAVLQALSVLHA---QGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVP  225 (346)
T ss_dssp             CTTEEHHHHHHHS----CCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTCCEEECCCTTCEECCSSSC
T ss_pred             CCCCcHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHH---CCcccccCCHHHEEECCCCCEEEecCcCceecCCCCC
Confidence            9999999999652    58999999999999999999999   9999999999999999999999999999997754432


Q ss_pred             ceeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhHHHHHhhhcCCCC
Q 005257          524 ASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRAKGGF  603 (705)
Q Consensus       524 ~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~l~~~~~~  603 (705)
                       .....+||+.|||||++.+..|+.++|||||||++|||++|+.||.+....  + +...+..+         .......
T Consensus       226 -~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~--~-~~~~i~~~---------~~~~~~~  292 (346)
T 4fih_A          226 -RRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPL--K-AMKMIRDN---------LPPRLKN  292 (346)
T ss_dssp             -CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH--H-HHHHHHHS---------SCCCCSC
T ss_pred             -cccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHH--H-HHHHHHcC---------CCCCCCc
Confidence             234578999999999999999999999999999999999999999865431  1 12222211         1101111


Q ss_pred             CHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 005257          604 DEDEVERVLHLGLLCAYPDPRARPTMRQVVKV  635 (705)
Q Consensus       604 ~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  635 (705)
                      .......+.+++..||+.||++|||+.|++++
T Consensus       293 ~~~~s~~~~dli~~~L~~dP~~R~ta~e~l~H  324 (346)
T 4fih_A          293 LHKVSPSLKGFLDRLLVRDPAQRATAAELLKH  324 (346)
T ss_dssp             GGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred             cccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence            22334568899999999999999999999874

>1dhk_B Bean lectin-like inhibitor, porcine pancreatic alpha-amylase; CO (hydrolase-inhibitor), complex (hydrolase-inhibitor) comple; HET: NAG; 1.85A {Phaseolus vulgaris} SCOP: b.29.1.1 PDB: 1viw_B*

Probab=100.00  E-value=8e-51  Score=403.67  Aligned_cols=197  Identities=28%  Similarity=0.506  Sum_probs=171.0

Q ss_pred             ceeeEEeCCCCCCCeEEEcceEee-cCcEEecCCCCCeEEEEEcCCCccccCCCCCcccceEEEEEEEEecCCCCCCCCc
Q 005257           24 SAVDFVFNGFNSSNLSLYGTATVE-SRILTLTNSTTFTIGRALYPSKIPTKRPNSSYVYPFSTSFIFAMAPYKGVLAGHG  102 (705)
Q Consensus        24 ~~~~f~f~~f~~~~~~~~g~a~~~-~~~l~lt~~~~~~~Gr~~y~~pv~l~~~~~~~~~sF~t~F~f~i~~~~~~~~g~G  102 (705)
                      ..++|+|++|+..||+|+|||.+. +|.|+||++..+++|||+|++||+|||+.+|+++||+|+|+|.|.+++...+|||
T Consensus         2 ~~~~F~f~~F~~~~l~l~G~A~v~~~g~l~LT~~~~~~~Gra~y~~Pi~l~~~~~g~vaSFsT~F~F~I~~~~~~~~gdG   81 (223)
T 1dhk_B            2 TETSFIIDAFNKTNLILQGDATVSSNGNLQLSYNSYDSMSRAFYSAPIQIRDSTTGNVASFDTNFTMNIRTHRQANSAVG   81 (223)
T ss_dssp             CCCEEEESSCCGGGEEEESSEEECTTSCEEESSSCSSEEEEEEESSCEESEETTTTEECEEEEEEEEEEECCC---CCSE
T ss_pred             cceEEEcCCCCcCCEEEeccEEECCCCEEEcCCCCCCCEEEEEECCCEEeecCCCCCccceEEEEEEEEeCCCCCCCCCc
Confidence            357999999998999999999996 8999999999999999999999999999999999999999999998877778999


Q ss_pred             eEEEEeeCCCCCCCCCCCcccccccCCCCCCCCcEEEEEeecccCCCCCCCCCCeeEEecCCCcccccccccccCCCCCC
Q 005257          103 LVFLFVPFHGIKGATEAQHLGLFNRTNDGNSSNHVFGVEFDVFKNQEFNDIDENHVGIDVNSLTSVSAHAAGYWPDNQTD  182 (705)
Q Consensus       103 ~aF~~~~~~~~~~~~~g~~lGl~~~~~~~~~~~~~vaVEFDt~~n~~~~d~~~~Hvgidvns~~S~~~~~~~~~~~~~~~  182 (705)
                      |||||+|....|.                   +++|||||||+         +||||||||++ |+++++   |      
T Consensus        82 lAF~l~p~~~~p~-------------------~~~vAVEFDT~---------~nHVGIdvNsi-S~~~~~---~------  123 (223)
T 1dhk_B           82 LDFVLVPVQPESK-------------------GDTVTVEFDTF---------LSRISIDVNNN-DIKSVP---W------  123 (223)
T ss_dssp             EEEEEEEC-------------------------CCEEEEEETT---------TTEEEEEETTE-EEEEEE---C------
T ss_pred             eEEEEecCCCCCC-------------------ccEEEEEecCC---------CCcccccCCcc-cccccc---C------
Confidence            9999999754322                   35899999998         68999999999 987754   3      


Q ss_pred             CCCCCCCCCCCCCccccceeecCCCcceEEEEEe--cCceEEEEEEEccCCCCCCCceeeeecCccccccceeccccccc
Q 005257          183 SSGSNSNSGTGDDEKSFKELKLNNGKNYQVWIDY--ADSFINITMVEAGMKRPKRPLLSVPLNLSGVLEDEMYVGFTAAT  260 (705)
Q Consensus       183 ~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~I~Y--~~~~~~v~~~~~~~~~~~~~~ls~~vdl~~~l~~~~~vGfsast  260 (705)
                                        ++.|.+|+.++|||+|  ..+.|+|++++.+  .++.|+|+..|||+++||++|||||||||
T Consensus       124 ------------------~~~l~~g~~~~v~I~Yd~~~~~L~V~l~~~~--~~~~~~ls~~vdLs~~l~e~~~VGFSAsT  183 (223)
T 1dhk_B          124 ------------------DVHDYDGQNAEVRITYNSSTKVFSVSLSNPS--TGKSNNVSTTVELEKEVYDWVSVGFSATS  183 (223)
T ss_dssp             ------------------CGGGTTTSCEEEEEEEETTTTEEEEEEECTT--TCCEEEEEEECCCCSGGGSEEEEEEEEEE
T ss_pred             ------------------CccccCCCEEEEEEEEeCCCCEEEEEEecCC--CCccceEEEEechHHhCCCceEEEEEecc
Confidence                              2467799999999999  5568999998654  34578999999999999999999999999


Q ss_pred             ccc---cccceeeeeeecccc
Q 005257          261 GQL---VESHKILAWSFSNTK  278 (705)
Q Consensus       261 g~~---~~~h~i~~wsf~~~~  278 (705)
                      |..   .+.|+|++|+|++..
T Consensus       184 G~~~~~~~~H~IlsWsF~s~~  204 (223)
T 1dhk_B          184 GAYQWSYETHDVLSWSFSSKF  204 (223)
T ss_dssp             CSGGGSCCEEEEEEEEEEEEC
T ss_pred             CCCccccceEEEEEEEEEecc
Confidence            998   999999999999865

>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}

Probab=100.00  E-value=1.4e-50  Score=423.40  Aligned_cols=247  Identities=21%  Similarity=0.404  Sum_probs=202.1

Q ss_pred             CcceEEeecCceEEEEEEEcCCCeEEEEEEeccC--CchhHHHHHHHHHHhccCCCCCcceeeeeeeec---cCceEEEE
Q 005257          367 SEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHE--NDGGTRAFLAEISSLGRLKHKSLVGLRGWCKRE---KGSLMLVY  441 (705)
Q Consensus       367 ~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~--~~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~---~~~~~lV~  441 (705)
                      ...++||+|+||+||+|.+..++..||+|++...  .....+.|.+|+++|++|+|||||++++++...   +..++|||
T Consensus        29 ~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~lvm  108 (290)
T 3fpq_A           29 KFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVT  108 (290)
T ss_dssp             EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEEEE
T ss_pred             EeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEEEE
Confidence            5567899999999999999999999999999654  344567799999999999999999999988542   34689999


Q ss_pred             eeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCC--eeecCCCCCCeEEcc-CCCeeeeeeccceec
Q 005257          442 DYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKK--VLHRDIKSSNVLLDK-EMNGRLGDFGLARMH  518 (705)
Q Consensus       442 E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~--iiHrDLkp~NILld~-~~~~kL~DFGla~~~  518 (705)
                      |||++|+|.++|.+..   .+++..+..++.||+.||+|||+   ++  ||||||||+||||+. ++.+||+|||+|+..
T Consensus       109 Ey~~gg~L~~~l~~~~---~l~~~~~~~~~~qi~~aL~ylH~---~~~~IiHRDlKp~NILl~~~~g~vKl~DFGla~~~  182 (290)
T 3fpq_A          109 ELMTSGTLKTYLKRFK---VMKIKVLRSWCRQILKGLQFLHT---RTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLK  182 (290)
T ss_dssp             ECCCSCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHT---SSSCCCCCCCCGGGEEESSTTSCEEECCTTGGGGC
T ss_pred             eCCCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHH---CCCCEEecccChhheeEECCCCCEEEEeCcCCEeC
Confidence            9999999999997654   69999999999999999999998   66  999999999999985 789999999999864


Q ss_pred             CCCCcceeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhHHHHHhhh
Q 005257          519 GHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDARLR  598 (705)
Q Consensus       519 ~~~~~~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~l~  598 (705)
                      ...   .....+||+.|||||++.+ +++.++|||||||++|||+||+.||.+...  ...+...+..+.....+     
T Consensus       183 ~~~---~~~~~~GTp~YmAPE~~~~-~y~~~~DiwSlGvilyelltg~~Pf~~~~~--~~~~~~~i~~~~~~~~~-----  251 (290)
T 3fpq_A          183 RAS---FAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQN--AAQIYRRVTSGVKPASF-----  251 (290)
T ss_dssp             CTT---SBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSS--HHHHHHHHTTTCCCGGG-----
T ss_pred             CCC---ccCCcccCccccCHHHcCC-CCCcHHHHHHHHHHHHHHHHCCCCCCCCCc--HHHHHHHHHcCCCCCCC-----
Confidence            332   2345689999999999864 699999999999999999999999976432  12233333333221111     


Q ss_pred             cCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 005257          599 AKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKV  635 (705)
Q Consensus       599 ~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  635 (705)
                           +......+.+++..||+.||++|||+.|++++
T Consensus       252 -----~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~H  283 (290)
T 3fpq_A          252 -----DKVAIPEVKEIIEGCIRQNKDERYSIKDLLNH  283 (290)
T ss_dssp             -----GGCCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred             -----CccCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence                 11122457889999999999999999999873

>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}

Probab=100.00  E-value=1.2e-50  Score=443.09  Aligned_cols=252  Identities=22%  Similarity=0.330  Sum_probs=213.2

Q ss_pred             hCCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCCchhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEEEEe
Q 005257          363 TKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYD  442 (705)
Q Consensus       363 t~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~lV~E  442 (705)
                      .+.|+..++||+|+||.||+|+++.+|+.||||++........+.+.+|+.+|+.++|||||++++++.. ++.+|||||
T Consensus       150 ~~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~-~~~~~iVmE  228 (423)
T 4fie_A          150 RSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLV-GDELWVVME  228 (423)
T ss_dssp             GGTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSSGGGHHHHHHHHHHCCCTTBCCEEEEEEE-TTEEEEEEE
T ss_pred             hHhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCCCceEEEEEE-CCEEEEEEe
Confidence            3568899999999999999999999999999999987766667789999999999999999999999887 678999999


Q ss_pred             eCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecCCCC
Q 005257          443 YMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQ  522 (705)
Q Consensus       443 ~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~~~~  522 (705)
                      ||++|+|.+++...    .+++.++..++.||+.||+|||+   ++||||||||+||||+.++.+||+|||+|+......
T Consensus       229 y~~gG~L~~~i~~~----~l~e~~~~~~~~qil~aL~ylH~---~~IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~~~  301 (423)
T 4fie_A          229 FLEGGALTDIVTHT----RMNEEQIAAVCLAVLQALSVLHA---QGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEV  301 (423)
T ss_dssp             CCTTEEHHHHHHHS----CCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSTTTEEECTTCCEEECCCTTCEECCSSC
T ss_pred             CCCCCcHHHHHhcc----CCCHHHHHHHHHHHHHHHHHHHH---CCeecccCCHHHEEEcCCCCEEEecCccceECCCCC
Confidence            99999999999653    58999999999999999999999   999999999999999999999999999999775443


Q ss_pred             cceeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhHHHHHhhhcCCC
Q 005257          523 VASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRAKGG  602 (705)
Q Consensus       523 ~~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~l~~~~~  602 (705)
                      . .....+||+.|||||++.+..|+.++|||||||++|||++|+.||.+....  + +...+..+..     +.+    .
T Consensus       302 ~-~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~--~-~~~~i~~~~~-----~~~----~  368 (423)
T 4fie_A          302 P-RRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPL--K-AMKMIRDNLP-----PRL----K  368 (423)
T ss_dssp             C-CBCCCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH--H-HHHHHHHSCC-----CCC----S
T ss_pred             c-cccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHH--H-HHHHHHcCCC-----CCC----c
Confidence            2 234578999999999999999999999999999999999999999765431  1 1122221110     011    1


Q ss_pred             CCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 005257          603 FDEDEVERVLHLGLLCAYPDPRARPTMRQVVKV  635 (705)
Q Consensus       603 ~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  635 (705)
                      ........+.+++..||+.||++|||+.|++++
T Consensus       369 ~~~~~s~~~~dli~~~L~~dP~~R~ta~ell~H  401 (423)
T 4fie_A          369 NLHKVSPSLKGFLDRLLVRDPAQRATAAELLKH  401 (423)
T ss_dssp             CTTSSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred             ccccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence            112234567899999999999999999999874

>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*

Probab=100.00  E-value=2.3e-50  Score=426.32  Aligned_cols=266  Identities=26%  Similarity=0.371  Sum_probs=201.6

Q ss_pred             CCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCCchhHHHHHHHHHHhccCCCCCcceeeeeeeeccC---ceEEE
Q 005257          364 KGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKG---SLMLV  440 (705)
Q Consensus       364 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~---~~~lV  440 (705)
                      ++|...++||+|+||+||+|++.  |+.||||+++... .....+.+|+..+.+++|||||+++++|..+..   .++||
T Consensus         3 r~i~L~~~iG~G~fG~Vy~~~~~--g~~VAvK~l~~~~-~~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~lV   79 (303)
T 3hmm_A            3 RTIVLQESIGKGRFGEVWRGKWR--GEEVAVKIFSSRE-ERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLV   79 (303)
T ss_dssp             GGEEEEEEEEECSSSEEEEEEET--TEEEEEEEECGGG-HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEE
T ss_pred             cEEEEEEEEeeCCCeEEEEEEEC--CEEEEEEEECccc-hhhHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEEEE
Confidence            34667889999999999999984  7899999986432 222234557777888999999999999986443   57999


Q ss_pred             EeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCC-----CCCeeecCCCCCCeEEccCCCeeeeeeccc
Q 005257          441 YDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGW-----EKKVLHRDIKSSNVLLDKEMNGRLGDFGLA  515 (705)
Q Consensus       441 ~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~-----~~~iiHrDLkp~NILld~~~~~kL~DFGla  515 (705)
                      ||||++|+|.++|+..    .++|.++.+++.|++.||+|||+.+     .++||||||||+||||+.++++||+|||+|
T Consensus        80 ~Ey~~~gsL~~~l~~~----~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DFGla  155 (303)
T 3hmm_A           80 SDYHEHGSLFDYLNRY----TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA  155 (303)
T ss_dssp             EECCTTCBHHHHHHHC----CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTC
T ss_pred             ecCCCCCcHHHHHHhC----CCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEeCCCC
Confidence            9999999999999753    5899999999999999999999731     349999999999999999999999999999


Q ss_pred             eecCCCCcc---eeeeeeccccCCCccccccC------CCCccccEEEEehhHHHHhhCCCCCCCCCc------------
Q 005257          516 RMHGHGQVA---STTRVVGTVGYLAPEVFSSG------RASTQTDVFGFGILILEVLSGRRPIEEGKP------------  574 (705)
Q Consensus       516 ~~~~~~~~~---~~~~~~gt~~y~APE~~~~~------~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~------------  574 (705)
                      +........   .....+||+.|||||++.+.      .++.++|||||||+||||+||+.|+.....            
T Consensus       156 ~~~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p~~~~~~~~  235 (303)
T 3hmm_A          156 VRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSD  235 (303)
T ss_dssp             EEEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSS
T ss_pred             ccccCCCCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCccccccccchhccccc
Confidence            877554332   22346899999999999754      367899999999999999999877642211            


Q ss_pred             cHHHHHHHHHHhCchhHHHHHhhhcCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHhccc
Q 005257          575 NLVEMVWELMVQGKLLDALDARLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLEGKIE  641 (705)
Q Consensus       575 ~~~~~v~~~~~~~~~~~~id~~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~  641 (705)
                      ...+.+...+..+.+    ++.+.. ...+.+..+.+.+|+.+||+.||++||||.||++.|+.+.+
T Consensus       236 ~~~~~~~~~~~~~~~----rp~~p~-~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~~l~~  297 (303)
T 3hmm_A          236 PSVEEMRKVVCEQKL----RPNIPN-RWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQ  297 (303)
T ss_dssp             CCHHHHHHHHTTSCC----CCCCCG-GGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             chHHHHHHHHhcccC----CCCCCc-cccchHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHHH
Confidence            111222222221111    011100 01123566788999999999999999999999999987654

>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A

Probab=100.00  E-value=5.7e-50  Score=415.32  Aligned_cols=247  Identities=25%  Similarity=0.393  Sum_probs=195.0

Q ss_pred             CCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCC---chhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEEE
Q 005257          364 KGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHEN---DGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLV  440 (705)
Q Consensus       364 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~---~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~lV  440 (705)
                      ++|+..+.||+|+||+||+|.+..+++.||||+++...   ....+.+.+|+++|++++||||+++++++.. ++.+|+|
T Consensus        13 g~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~-~~~~~iv   91 (275)
T 3hyh_A           13 GNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKS-KDEIIMV   91 (275)
T ss_dssp             -CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEEC-SSEEEEE
T ss_pred             eCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEE-CCEEEEE
Confidence            57999999999999999999999999999999997542   2345679999999999999999999998876 7789999


Q ss_pred             EeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecCC
Q 005257          441 YDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGH  520 (705)
Q Consensus       441 ~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~~  520 (705)
                      |||+ +|+|.+++.+..   .+++.++..++.||+.||+|||+   ++|+||||||+|||+++++++||+|||+|+....
T Consensus        92 mEy~-~g~L~~~l~~~~---~l~e~~~~~~~~qi~~al~ylH~---~~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~  164 (275)
T 3hyh_A           92 IEYA-GNELFDYIVQRD---KMSEQEARRFFQQIISAVEYCHR---HKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTD  164 (275)
T ss_dssp             EECC-CEEHHHHHHHSC---SCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCTTTEEECTTCCEEECCSSCC-----
T ss_pred             EeCC-CCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHH---CCcccccCChHHeEECCCCCEEEeecCCCeecCC
Confidence            9999 689999997643   69999999999999999999999   9999999999999999999999999999987654


Q ss_pred             CCcceeeeeeccccCCCccccccCCC-CccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhHHHHHhhhc
Q 005257          521 GQVASTTRVVGTVGYLAPEVFSSGRA-STQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRA  599 (705)
Q Consensus       521 ~~~~~~~~~~gt~~y~APE~~~~~~~-s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~l~~  599 (705)
                      ..  .....+||+.|||||++.+..+ +.++||||+||++|||+||+.||.....   ..+.+.+..+.           
T Consensus       165 ~~--~~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~~~---~~~~~~i~~~~-----------  228 (275)
T 3hyh_A          165 GN--FLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESI---PVLFKNISNGV-----------  228 (275)
T ss_dssp             ------------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH---HHHHHHHHHTC-----------
T ss_pred             CC--ccCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCCCH---HHHHHHHHcCC-----------
Confidence            33  2334689999999999988776 5799999999999999999999976432   12222222222           


Q ss_pred             CCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 005257          600 KGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKV  635 (705)
Q Consensus       600 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  635 (705)
                       ..++....+.+.+++..||+.||++|||+.|++++
T Consensus       229 -~~~p~~~s~~~~~li~~~L~~dP~~R~s~~eil~h  263 (275)
T 3hyh_A          229 -YTLPKFLSPGAAGLIKRMLIVNPLNRISIHEIMQD  263 (275)
T ss_dssp             -CCCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHHC
T ss_pred             -CCCCCCCCHHHHHHHHHHccCChhHCcCHHHHHcC
Confidence             12223334567899999999999999999999883

>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*

Probab=100.00  E-value=3.1e-50  Score=423.02  Aligned_cols=243  Identities=25%  Similarity=0.324  Sum_probs=196.1

Q ss_pred             CCCCcceEEeecCceEEEEEEEc---CCCeEEEEEEeccCC--chhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceE
Q 005257          364 KGFSEENVIGVGGNGKVYKGVLE---GGGAEIAVKRISHEN--DGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLM  438 (705)
Q Consensus       364 ~~f~~~~~LG~G~fg~Vy~~~~~---~~~~~vavK~i~~~~--~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~  438 (705)
                      ++|+..+.||+|+||+||+|+..   .+++.||||+++...  ......+.+|+++|++++|||||++++++.+ ++.+|
T Consensus        24 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~-~~~~~  102 (304)
T 3ubd_A           24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQT-EGKLY  102 (304)
T ss_dssp             GGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEE-TTEEE
T ss_pred             cccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEE-CCEEE
Confidence            46899999999999999999874   457899999997542  2234468899999999999999999999876 77899


Q ss_pred             EEEeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceec
Q 005257          439 LVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMH  518 (705)
Q Consensus       439 lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~  518 (705)
                      ||||||++|+|.++|.+..   .+++.++..++.||+.||+|||+   ++|+||||||+|||++.++.+||+|||+|+..
T Consensus       103 ivmEy~~gg~L~~~l~~~~---~l~e~~~~~~~~qi~~aL~ylH~---~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~  176 (304)
T 3ubd_A          103 LILDFLRGGDLFTRLSKEV---MFTEEDVKFYLAELALALDHLHS---LGIIYRDLKPENILLDEEGHIKLTDFGLSKES  176 (304)
T ss_dssp             EEECCCTTCEEHHHHHHHC---CCCHHHHHHHHHHHHHHHHHHHH---TTCCCSSCCGGGEEECTTSCEEEESSEEEEC-
T ss_pred             EEEEcCCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHH---CCCcCCCCCHHHeEEcCCCCEEecccccceec
Confidence            9999999999999997654   69999999999999999999999   99999999999999999999999999999865


Q ss_pred             CCCCcceeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhHHHHHhhh
Q 005257          519 GHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDARLR  598 (705)
Q Consensus       519 ~~~~~~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~l~  598 (705)
                      ..... .....+||+.|||||++.+..++.++||||+||++|||+||+.||......   .+...+.++.          
T Consensus       177 ~~~~~-~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~---~~~~~i~~~~----------  242 (304)
T 3ubd_A          177 IDHEK-KAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRK---ETMTMILKAK----------  242 (304)
T ss_dssp             ----C-CCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH---HHHHHHHHCC----------
T ss_pred             cCCCc-cccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCcCHH---HHHHHHHcCC----------
Confidence            43322 233468999999999999999999999999999999999999999865431   1222222221          


Q ss_pred             cCCCCCHHHHHHHHHHHHHcCCCCCCCCCCH
Q 005257          599 AKGGFDEDEVERVLHLGLLCAYPDPRARPTM  629 (705)
Q Consensus       599 ~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~  629 (705)
                        ..++......+.+++..||+.||++|||+
T Consensus       243 --~~~p~~~s~~~~~li~~~L~~dP~~R~ta  271 (304)
T 3ubd_A          243 --LGMPQFLSPEAQSLLRMLFKRNPANRLGA  271 (304)
T ss_dssp             --CCCCTTSCHHHHHHHHHHTCSSGGGSTTC
T ss_pred             --CCCCCcCCHHHHHHHHHHcccCHHHCCCC
Confidence              22333345668899999999999999985

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*

Probab=100.00  E-value=2e-48  Score=409.99  Aligned_cols=251  Identities=22%  Similarity=0.333  Sum_probs=192.3

Q ss_pred             CCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCCch-hHHHHHHHHHHhccCCCCCcceeeeeeeeccC--------
Q 005257          365 GFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDG-GTRAFLAEISSLGRLKHKSLVGLRGWCKREKG--------  435 (705)
Q Consensus       365 ~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~~-~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~--------  435 (705)
                      +|+..+.||+|+||+||+|+++.+++.||||+++....+ ..+.+.+|+++|++|+|||||++++++...+.        
T Consensus         6 dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~~~   85 (299)
T 4g31_A            6 DFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPSS   85 (299)
T ss_dssp             HEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC---------
T ss_pred             hCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCccccccccC
Confidence            478899999999999999999999999999999765443 45679999999999999999999998865332        


Q ss_pred             ---ceEEEEeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeee
Q 005257          436 ---SLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDF  512 (705)
Q Consensus       436 ---~~~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DF  512 (705)
                         .+|+|||||++|+|.+++..........+..++.++.||+.||+|||+   ++|+||||||+|||++.++.+||+||
T Consensus        86 ~~~~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH~---~~IiHRDlKp~NILl~~~~~vKl~DF  162 (299)
T 4g31_A           86 PKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHS---KGLMHRDLKPSNIFFTMDDVVKVGDF  162 (299)
T ss_dssp             -CEEEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTCCEEECCC
T ss_pred             CCcEEEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHH---CcCccccCcHHHeEECCCCcEEEccC
Confidence               379999999999999999865443345677789999999999999999   99999999999999999999999999


Q ss_pred             ccceecCCCCcc-----------eeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHH
Q 005257          513 GLARMHGHGQVA-----------STTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVW  581 (705)
Q Consensus       513 Gla~~~~~~~~~-----------~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~  581 (705)
                      |+|+........           ..+..+||+.|||||++.+..|+.++|||||||++|||++   ||......  ....
T Consensus       163 Gla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~---Pf~~~~~~--~~~~  237 (299)
T 4g31_A          163 GLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFSTQMER--VRTL  237 (299)
T ss_dssp             CCC--------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS---CCSSHHHH--HHHH
T ss_pred             ccceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc---CCCCccHH--HHHH
Confidence            999876543221           1234689999999999999999999999999999999996   77542110  0111


Q ss_pred             HHHHhCchhHHHHHhhhcCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHH
Q 005257          582 ELMVQGKLLDALDARLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVK  634 (705)
Q Consensus       582 ~~~~~~~~~~~id~~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~  634 (705)
                      ...........           .......+.+++..||++||++|||+.|+++
T Consensus       238 ~~~~~~~~p~~-----------~~~~~~~~~~li~~~L~~dP~~Rps~~eil~  279 (299)
T 4g31_A          238 TDVRNLKFPPL-----------FTQKYPCEYVMVQDMLSPSPMERPEAINIIE  279 (299)
T ss_dssp             HHHHTTCCCHH-----------HHHHCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             HHHhcCCCCCC-----------CcccCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence            11222222111           1122345678999999999999999999987

>2ltn_A PEA lectin, alpha chain; 1.70A {Pisum sativum} SCOP: b.29.1.1 PDB: 1bqp_A* 1hkd_A 1ofs_A* 1rin_A* 1lof_C* 1len_A 1lem_A 1les_A* 2lal_A 1loe_A 1loa_A* 1loc_A* 1lod_A* 1lob_A 1lof_A* 1log_A* 1lgc_A* 1lgb_A* 2b7y_A*

Probab=100.00  E-value=3.2e-47  Score=365.18  Aligned_cols=172  Identities=31%  Similarity=0.501  Sum_probs=155.5

Q ss_pred             ceeeEEeCCCC--CCCeEEEcceEeecCcEEecCCCCCeEEEEEcCCCccccCCCCCcccceEEEEEEEEecCCCCCCCC
Q 005257           24 SAVDFVFNGFN--SSNLSLYGTATVESRILTLTNSTTFTIGRALYPSKIPTKRPNSSYVYPFSTSFIFAMAPYKGVLAGH  101 (705)
Q Consensus        24 ~~~~f~f~~f~--~~~~~~~g~a~~~~~~l~lt~~~~~~~Gr~~y~~pv~l~~~~~~~~~sF~t~F~f~i~~~~~~~~g~  101 (705)
                      ..++|+|++|+  ..||+|+|||+..+|.|+||+...+++|||+|++||+||++.+|+++||+|+|+|.|.+.+...+||
T Consensus         2 ~~~sF~f~~F~~~~~~l~l~G~A~~~~g~l~LT~~~~~~~Gra~y~~Pv~l~d~~tg~vaSFsT~F~F~I~~~~~~~~gd   81 (181)
T 2ltn_A            2 ETTSFLITKFSPDQQNLIFQGDGYTTKEKLTLTKAVKNTVGRALYSSPIHIWDRETGNVANFVTSFTFVINAPNSYNVAD   81 (181)
T ss_dssp             EEEEEEESSCCSSCTTEEEEETCEECSSSEEEECSCSSCEEEEEESSCEECBCTTTCCBCEEEEEEEEEEECSSTTSCCC
T ss_pred             cceEEEcCCCCCCCCCEEEeccccCCCCCeEcCCCCCCCEEEEEECCCEEeecCCCCCccceEEEEEEEEecCCCCCCCC
Confidence            46899999998  6899999999955799999999999999999999999999999999999999999999877777899


Q ss_pred             ceEEEEeeCCCCCCCCCCCcccccccCCCCCCCCcEEEEEeecccCCCCCCCC--CCeeEEecCCCcccccccccccCCC
Q 005257          102 GLVFLFVPFHGIKGATEAQHLGLFNRTNDGNSSNHVFGVEFDVFKNQEFNDID--ENHVGIDVNSLTSVSAHAAGYWPDN  179 (705)
Q Consensus       102 G~aF~~~~~~~~~~~~~g~~lGl~~~~~~~~~~~~~vaVEFDt~~n~~~~d~~--~~Hvgidvns~~S~~~~~~~~~~~~  179 (705)
                      ||||||+|....|. +.||||||+|.+ +++..+|+|||||||++|.+ |||+  +|||||||||+.|+++++       
T Consensus        82 GlAF~l~p~~~~p~-~~g~~LGL~n~~-~~~~~n~~vAVEFDT~~n~~-~Dp~~~~nHVGIdvNs~~S~~t~~-------  151 (181)
T 2ltn_A           82 GFTFFIAPVDTKPQ-TGGGYLGVFNSA-EYDKTTQTVAVEFDTFYNAA-WDPSNRDRHIGIDVNSIKSVNTKS-------  151 (181)
T ss_dssp             EEEEEEEETTCCCC-CCGGGTTTCSCS-SCCTTSCCEEEEEECSCCTT-TSCTTCCCEEEEEESSSSCSEEEE-------
T ss_pred             ceEEEEecCCCCCC-CCCccccccccC-CCCccccEEEEEeccccccc-cCCCCCCCEEEEEcCCccccceec-------
Confidence            99999999876666 889999999976 45788999999999999998 6999  999999999999988753       


Q ss_pred             CCCCCCCCCCCCCCCCccccceeecCCCcceEEEEEe--cCceEEEEEEE
Q 005257          180 QTDSSGSNSNSGTGDDEKSFKELKLNNGKNYQVWIDY--ADSFINITMVE  227 (705)
Q Consensus       180 ~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~I~Y--~~~~~~v~~~~  227 (705)
                                            ++|.+|+.++|||+|  ..++|+|+|+.
T Consensus       152 ----------------------~~l~~G~~~~v~I~Yd~~~~~L~V~l~~  179 (181)
T 2ltn_A          152 ----------------------WKLQNGEEANVVIAFNAATNVLTVSLTY  179 (181)
T ss_dssp             ----------------------CCCCTTCCEEEEEEEETTTTEEEEEEEE
T ss_pred             ----------------------cccCCCCEEEEEEEEECCCCEEEEEEec
Confidence                                  347799999999999  66789999975

>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}

Probab=100.00  E-value=2.4e-46  Score=409.15  Aligned_cols=265  Identities=23%  Similarity=0.306  Sum_probs=204.2

Q ss_pred             CCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCC--chhHHHHHHHHHHhccCCCCCcceeeeeeee-----ccCc
Q 005257          364 KGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHEN--DGGTRAFLAEISSLGRLKHKSLVGLRGWCKR-----EKGS  436 (705)
Q Consensus       364 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~--~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~-----~~~~  436 (705)
                      ++|...+.||+|+||+||+|+++.+|+.||||+++...  ....+.+.+|+++|+.|+|||||++++++..     +.+.
T Consensus        54 ~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~~  133 (398)
T 4b99_A           54 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKS  133 (398)
T ss_dssp             SSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCCC
T ss_pred             CCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCCE
Confidence            57899999999999999999999999999999997553  3345678999999999999999999998753     2357


Q ss_pred             eEEEEeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccce
Q 005257          437 LMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLAR  516 (705)
Q Consensus       437 ~~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~  516 (705)
                      +|||||||+ |+|.+++.+..   .+++.++..++.||+.||.|||+   ++||||||||+|||++.++.+||+|||+|+
T Consensus       134 ~~ivmE~~~-g~L~~~i~~~~---~l~~~~~~~~~~qil~al~ylH~---~~iiHRDlKP~NIl~~~~~~~Ki~DFGla~  206 (398)
T 4b99_A          134 VYVVLDLME-SDLHQIIHSSQ---PLTLEHVRYFLYQLLRGLKYMHS---AQVIHRDLKPSNLLVNENCELKIGDFGMAR  206 (398)
T ss_dssp             EEEEEECCS-EEHHHHHTSSS---CCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTCCEEECCCTTCB
T ss_pred             EEEEEeCCC-CCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHH---CcCcCCCcCccccccCCCCCEEEeecceee
Confidence            899999996 68999986533   79999999999999999999999   999999999999999999999999999998


Q ss_pred             ecCCCC---cceeeeeeccccCCCccccccC-CCCccccEEEEehhHHHHhhCCCCCCCCCcc-HHHHHHHHHHhCch--
Q 005257          517 MHGHGQ---VASTTRVVGTVGYLAPEVFSSG-RASTQTDVFGFGILILEVLSGRRPIEEGKPN-LVEMVWELMVQGKL--  589 (705)
Q Consensus       517 ~~~~~~---~~~~~~~~gt~~y~APE~~~~~-~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~-~~~~v~~~~~~~~~--  589 (705)
                      .+....   .......+||+.|||||++.+. .++.++||||+||++|||++|+.||.+.... ....+.........  
T Consensus       207 ~~~~~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~~~~~l~~I~~~~g~p~~~~  286 (398)
T 4b99_A          207 GLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPAV  286 (398)
T ss_dssp             CC-------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHHHHHHHHHCCCCGGG
T ss_pred             ecccCccccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCChHH
Confidence            764322   1223456899999999998775 5699999999999999999999999875431 11111111110000  


Q ss_pred             --------hHHHHHhhhcCCCCCH-----HHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 005257          590 --------LDALDARLRAKGGFDE-----DEVERVLHLGLLCAYPDPRARPTMRQVVKV  635 (705)
Q Consensus       590 --------~~~id~~l~~~~~~~~-----~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  635 (705)
                              .......+......+.     .....+.+|+..||..||++|||+.|++++
T Consensus       287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~H  345 (398)
T 4b99_A          287 IQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALRH  345 (398)
T ss_dssp             TC-----CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTTS
T ss_pred             hhhhhhhhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCChhHCcCHHHHhcC
Confidence                    0000001110011111     112467889999999999999999999874

>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*

Probab=100.00  E-value=9e-46  Score=400.08  Aligned_cols=305  Identities=20%  Similarity=0.289  Sum_probs=209.7

Q ss_pred             HHhCCCCcceEEeecCceEEEEEEEc---CCCeEEEEEEeccCCchhHHHHHHHHHHhccC-CCCCcceeeeeeeeccCc
Q 005257          361 AATKGFSEENVIGVGGNGKVYKGVLE---GGGAEIAVKRISHENDGGTRAFLAEISSLGRL-KHKSLVGLRGWCKREKGS  436 (705)
Q Consensus       361 ~at~~f~~~~~LG~G~fg~Vy~~~~~---~~~~~vavK~i~~~~~~~~~~~~~Ei~~l~~l-~Hpniv~l~g~~~~~~~~  436 (705)
                      ...++|+..++||+|+||+||+|+++   .+++.||||++....  ....+.+|+++|..+ +||||+++++++.. ++.
T Consensus        18 ~l~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~--~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~-~~~   94 (361)
T 4f9c_A           18 QLSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTS--HPIRIAAELQCLTVAGGQDNVMGVKYCFRK-NDH   94 (361)
T ss_dssp             GGGGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTS--CHHHHHHHHHHHHHTCSBTTBCCCSEEEEE-TTE
T ss_pred             CccCcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEcccc--CHHHHHHHHHHHHHhcCCCCCceEEEEEEE-CCE
Confidence            34678999999999999999999875   357899999986543  345688999999998 69999999998876 778


Q ss_pred             eEEEEeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccC-CCeeeeeeccc
Q 005257          437 LMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKE-MNGRLGDFGLA  515 (705)
Q Consensus       437 ~~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~-~~~kL~DFGla  515 (705)
                      +++||||+++|+|.+++.      .+++.++..++.||+.||+|||+   ++|+||||||+|||++.+ +.+||+|||+|
T Consensus        95 ~~lvmE~~~g~~L~~~~~------~l~~~~~~~~~~qll~al~ylH~---~gIiHRDiKPeNiLl~~~~~~~kl~DFGla  165 (361)
T 4f9c_A           95 VVIAMPYLEHESFLDILN------SLSFQEVREYMLNLFKALKRIHQ---FGIVHRDVKPSNFLYNRRLKKYALVDFGLA  165 (361)
T ss_dssp             EEEEEECCCCCCHHHHHT------TCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEETTTTEEEECCCTTC
T ss_pred             EEEEEeCCCcccHHHHHc------CCCHHHHHHHHHHHHHHHHHHHH---CCeEeCcCCHHHeEEeCCCCeEEECcCCCC
Confidence            999999999999999983      48999999999999999999999   999999999999999877 79999999999


Q ss_pred             eecCCCCc---------------------------ceeeeeeccccCCCccccccC-CCCccccEEEEehhHHHHhhCCC
Q 005257          516 RMHGHGQV---------------------------ASTTRVVGTVGYLAPEVFSSG-RASTQTDVFGFGILILEVLSGRR  567 (705)
Q Consensus       516 ~~~~~~~~---------------------------~~~~~~~gt~~y~APE~~~~~-~~s~ksDVwS~Gvvl~ElltG~~  567 (705)
                      +.......                           ...+..+||+.|||||++.+. .++.++||||+||++|||++|+.
T Consensus       166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ell~G~~  245 (361)
T 4f9c_A          166 QGTHDTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRY  245 (361)
T ss_dssp             EECTTCSCGGGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTCS
T ss_pred             cccCCccccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHHHHHHCCC
Confidence            86543221                           112335799999999999775 58999999999999999999999


Q ss_pred             CCCCCCccHHHHHHHHHHhCchhHHHHHh-----hhcCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHhcccc
Q 005257          568 PIEEGKPNLVEMVWELMVQGKLLDALDAR-----LRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLEGKIEA  642 (705)
Q Consensus       568 Pf~~~~~~~~~~v~~~~~~~~~~~~id~~-----l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~~  642 (705)
                      ||..+..+...........|.........     .......+......+.+.....-...|...........        
T Consensus       246 Pf~~~~~~~~~l~~I~~~~G~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~--------  317 (361)
T 4f9c_A          246 PFYKASDDLTALAQIMTIRGSRETIQAAKTFGKSILCSKEVPAQDLRKLCERLRGMDSSTPKLTSDIQGHAT--------  317 (361)
T ss_dssp             SSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTEEEEESSCCCCCCHHHHHHHHC--------------------------
T ss_pred             CCCCCCCHHHHHHHHHHhcCCccchhhhhhccccccccccCcchhhhHHHHhhccccccccccccccccccc--------
Confidence            99776543221111111111110000000     00000111111111111111111111111000000000        


Q ss_pred             CCCCCcchhhHHHHHHhhccccccccccccccCCCCCCCccccc
Q 005257          643 GIENETEDMDAYLLQQVKSKDMWANYSRSFGYGYATHPTFHDIR  686 (705)
Q Consensus       643 ~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~hp~f~~~~  686 (705)
                       .............+++.++..++|..|.++.++++||||.++.
T Consensus       318 -~~~~~~~is~~a~DLl~~lL~~dP~~R~ta~eaL~Hp~f~~i~  360 (361)
T 4f9c_A          318 -NLEGWNEVPDEAYDLLDKLLDLNPASRITAEEALLHPFFKDMS  360 (361)
T ss_dssp             -----CTTCCHHHHHHHHHHTCSCTTTSCCHHHHHTSGGGTTC-
T ss_pred             -cccccccCCHHHHHHHHHHCcCChhHCcCHHHHhcCcccCCCC
Confidence             0011123344567888889999999999999999999999864

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A

Probab=100.00  E-value=1.3e-44  Score=413.80  Aligned_cols=254  Identities=22%  Similarity=0.317  Sum_probs=212.6

Q ss_pred             hCCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCCchhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEEEEe
Q 005257          363 TKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYD  442 (705)
Q Consensus       363 t~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~lV~E  442 (705)
                      .++|.+.+.||+|+||.||+|.++.+|+.||||++........+.+.+|+++|+.|+||||+++++++.. ++.++||||
T Consensus       156 l~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~-~~~~~iv~E  234 (573)
T 3uto_A          156 LDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFED-DNEMVMIYE  234 (573)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEEC-SSEEEEEEE
T ss_pred             ccccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccchhhHHHHHHHHHHHHhCCCCCCCeEEEEEEE-CCEEEEEEe
Confidence            3579999999999999999999999999999999987766667789999999999999999999998876 778999999


Q ss_pred             eCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccC--CCeeeeeeccceecCC
Q 005257          443 YMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKE--MNGRLGDFGLARMHGH  520 (705)
Q Consensus       443 ~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~--~~~kL~DFGla~~~~~  520 (705)
                      ||++|+|.++|....  ..+++.++..++.||+.||.|||+   ++|+||||||+|||++.+  +.+||+|||+|+....
T Consensus       235 ~~~gg~L~~~i~~~~--~~l~e~~~~~~~~qi~~al~ylH~---~~iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~~  309 (573)
T 3uto_A          235 FMSGGELFEKVADEH--NKMSEDEAVEYMRQVCKGLCHMHE---NNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDP  309 (573)
T ss_dssp             CCCCCBHHHHHTCTT--SCEEHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEESSSSCCCEEECCCSSCEECCT
T ss_pred             ecCCCcHHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHH---CCeeeccCChhhccccCCCCCCEEEeeccceeEccC
Confidence            999999999986433  269999999999999999999999   999999999999999854  8999999999998765


Q ss_pred             CCcceeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhHHHHHhhhcC
Q 005257          521 GQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRAK  600 (705)
Q Consensus       521 ~~~~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~l~~~  600 (705)
                      ..  .....+||+.|||||++.+..|+.++||||+||++|||++|+.||.+....   .....+..+...      +.  
T Consensus       310 ~~--~~~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~~~~---~~~~~i~~~~~~------~~--  376 (573)
T 3uto_A          310 KQ--SVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDD---ETLRNVKSCDWN------MD--  376 (573)
T ss_dssp             TS--EEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHH---HHHHHHHTTCCC------CC--
T ss_pred             CC--ceeeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHH---HHHHHHHhCCCC------CC--
Confidence            43  334568999999999999999999999999999999999999999865431   112222222110      00  


Q ss_pred             CCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 005257          601 GGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKV  635 (705)
Q Consensus       601 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  635 (705)
                      ........+.+.+|+..||+.||.+|||+.|++++
T Consensus       377 ~~~~~~~s~~~~dli~~~L~~dp~~R~t~~e~l~H  411 (573)
T 3uto_A          377 DSAFSGISEDGKDFIRKLLLADPNTRMTIHQALEH  411 (573)
T ss_dssp             SGGGTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred             cccccCCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence            00001123567889999999999999999999884

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*

Probab=100.00  E-value=1.3e-44  Score=385.64  Aligned_cols=286  Identities=38%  Similarity=0.700  Sum_probs=237.9

Q ss_pred             CcccCHHHHHHHhCCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCCc-hhHHHHHHHHHHhccCCCCCcceeeee
Q 005257          351 PHRITYQEIEAATKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHEND-GGTRAFLAEISSLGRLKHKSLVGLRGW  429 (705)
Q Consensus       351 ~~~~~~~el~~at~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~-~~~~~~~~Ei~~l~~l~Hpniv~l~g~  429 (705)
                      .++++++++..+.++|...+.||+|+||.||+|.+. +++.||||++..... .....+.+|+++++.++||||++++++
T Consensus        17 ~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~   95 (326)
T 3uim_A           17 LKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLA-DGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGF   95 (326)
T ss_dssp             CEECCTHHHHTTTTSSCSTTEEECCSSSEEEEECCS-SSCCEEEEECCC-----CCCHHHHHHHGGGTCCCTTBCCCCEE
T ss_pred             cceecHHHHHHHhhccccceeEecCCCcEEEEEEec-CCCEEEEEEeccccCchHHHHHHHHHHHHHhccCCCccceEEE
Confidence            467899999999999999999999999999999865 578899999876532 233468999999999999999999999


Q ss_pred             eeeccCceEEEEeeCCCCChhHHHHhcCC-CCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCee
Q 005257          430 CKREKGSLMLVYDYMENGSLDKWIFQCDG-SMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGR  508 (705)
Q Consensus       430 ~~~~~~~~~lV~E~~~~gsL~~~L~~~~~-~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~k  508 (705)
                      |.. ....++||||+++|+|.+++..... ...+++..+..++.|++.||.|||+.+..+|+||||||+|||++.++.+|
T Consensus        96 ~~~-~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~~~~~~k  174 (326)
T 3uim_A           96 CMT-PTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAV  174 (326)
T ss_dssp             ECC-SSCCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEECTTCCEE
T ss_pred             Eec-CCceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEECCCCCEE
Confidence            876 6678999999999999999986532 33599999999999999999999993333999999999999999999999


Q ss_pred             eeeeccceecCCCCcceeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhhCCCCCCC------CCccHHHHHHH
Q 005257          509 LGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEE------GKPNLVEMVWE  582 (705)
Q Consensus       509 L~DFGla~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~------~~~~~~~~v~~  582 (705)
                      |+|||+++..............||+.|+|||++.+..++.++|||||||++|||++|+.||..      ......+++..
T Consensus       175 l~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~  254 (326)
T 3uim_A          175 VGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKG  254 (326)
T ss_dssp             ECCCSSCEECCSSSSCEECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTSCSBHHHHHTT
T ss_pred             eccCccccccCcccccccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCcccccccccccchhHHHHHHH
Confidence            999999998765555555556799999999999888899999999999999999999999952      22234444444


Q ss_pred             HHHhCchhHHHHHhhhcCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHhcc
Q 005257          583 LMVQGKLLDALDARLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLEGKI  640 (705)
Q Consensus       583 ~~~~~~~~~~id~~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~  640 (705)
                      ...........+..+.  ..+...+...+.+++..||+.||.+|||+.|++++|++..
T Consensus       255 ~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~~~  310 (326)
T 3uim_A          255 LLKEKKLEALVDVDLQ--GNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGDG  310 (326)
T ss_dssp             TTSSCCSTTSSCTTCT--TSCCHHHHHHHHHHHHHHTCSCGGGSCCHHHHHHHHHTSS
T ss_pred             HhhchhhhhhcChhhc--cccCHHHHHHHHHHHHHHhCcCCccCCCHHHHHHHhcCcc
Confidence            4444444444444443  5567888999999999999999999999999999998653

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*

Probab=100.00  E-value=2.1e-44  Score=383.38  Aligned_cols=283  Identities=35%  Similarity=0.622  Sum_probs=236.0

Q ss_pred             cccCHHHHHHHhCCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCCchhHHHHHHHHHHhccCCCCCcceeeeeee
Q 005257          352 HRITYQEIEAATKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCK  431 (705)
Q Consensus       352 ~~~~~~el~~at~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~  431 (705)
                      .++++.++..++++|...+.||+|+||.||+|.+. +++.||||++........+.+.+|+.+++.++||||++++++|.
T Consensus        27 ~~~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~  105 (321)
T 2qkw_B           27 YRVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLR-DGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCD  105 (321)
T ss_dssp             ---CCSCCCCCCCCCSCCCCSCBCSSSEEEEEECT-TCCEEEEEECCSCCSSHHHHHHHHHHGGGSCCCTTBCCEEEECC
T ss_pred             eeecHHHHHHHHhccCccceeecCCCeeEEEEEEC-CCCEEEEEEecccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEc
Confidence            34556677778899999999999999999999975 57899999988777677788999999999999999999999987


Q ss_pred             eccCceEEEEeeCCCCChhHHHHhcCC-CCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeee
Q 005257          432 REKGSLMLVYDYMENGSLDKWIFQCDG-SMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLG  510 (705)
Q Consensus       432 ~~~~~~~lV~E~~~~gsL~~~L~~~~~-~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~  510 (705)
                      . .+..++||||+++|+|.+++..... ...+++.+++.++.|++.||.|||+   ++|+||||||+|||++.++.+||+
T Consensus       106 ~-~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~---~~ivH~dlkp~Nil~~~~~~~kl~  181 (321)
T 2qkw_B          106 E-RNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHT---RAIIHRDVKSINILLDENFVPKIT  181 (321)
T ss_dssp             C-TTCCEEEEECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCSTTEEECTTCCEEEC
T ss_pred             C-CCeEEEEEEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhcC---CCeecCCCCHHHEEECCCCCEEEe
Confidence            6 6788999999999999999965432 2358999999999999999999999   999999999999999999999999


Q ss_pred             eeccceecCCCC-cceeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhhCCCCCCCCCc----cHHHHHHHHHH
Q 005257          511 DFGLARMHGHGQ-VASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKP----NLVEMVWELMV  585 (705)
Q Consensus       511 DFGla~~~~~~~-~~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~----~~~~~v~~~~~  585 (705)
                      |||+++...... ........||+.|+|||++.+..++.++|||||||++|||++|+.||....+    ....+......
T Consensus       182 Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~  261 (321)
T 2qkw_B          182 DFGISKKGTELDQTHLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHN  261 (321)
T ss_dssp             CCTTCEECSSSSCCCCBCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSSSCCCHHHHTHHHHT
T ss_pred             ecccccccccccccccccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccCcHHHHHHHHHhhhccc
Confidence            999998754322 2223345789999999999888999999999999999999999999975432    34444444444


Q ss_pred             hCchhHHHHHhhhcCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHhccc
Q 005257          586 QGKLLDALDARLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLEGKIE  641 (705)
Q Consensus       586 ~~~~~~~id~~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~  641 (705)
                      .+.+...+++.+.  .....+....+.+++..||+.||++|||+.|+++.|+...+
T Consensus       262 ~~~~~~~~~~~~~--~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~l~  315 (321)
T 2qkw_B          262 NGQLEQIVDPNLA--DKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALR  315 (321)
T ss_dssp             TTCCCSSSSSSCT--TCSCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             cccHHHhcChhhc--cccCHHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhh
Confidence            4544444444433  44567888999999999999999999999999999997765

>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A

Probab=100.00  E-value=2.9e-44  Score=409.79  Aligned_cols=249  Identities=23%  Similarity=0.304  Sum_probs=203.3

Q ss_pred             CCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCC---chhHHH---HHHHHHHhccCCCCCcceeeeeeeeccCce
Q 005257          364 KGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHEN---DGGTRA---FLAEISSLGRLKHKSLVGLRGWCKREKGSL  437 (705)
Q Consensus       364 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~---~~~~~~---~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~  437 (705)
                      ++|...++||+|+||+||+|+++.+|+.||||++++..   ......   ...++.+++.++|||||++++++.+ .+.+
T Consensus       189 ddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~-~~~l  267 (689)
T 3v5w_A          189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHT-PDKL  267 (689)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEEC-SSEE
T ss_pred             HHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEE-CCEE
Confidence            56899999999999999999999999999999996431   122222   3345677888999999999998876 7789


Q ss_pred             EEEEeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeecccee
Q 005257          438 MLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARM  517 (705)
Q Consensus       438 ~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~  517 (705)
                      |||||||+||+|.++|.+..   .+++..+..++.||+.||.|||+   ++||||||||+||||+.+|.+||+|||+|+.
T Consensus       268 ylVmEy~~GGdL~~~l~~~~---~l~E~~a~~y~~qIl~aL~yLH~---~gIiHRDLKPeNILld~~G~vKL~DFGlA~~  341 (689)
T 3v5w_A          268 SFILDLMNGGDLHYHLSQHG---VFSEADMRFYAAEIILGLEHMHN---RFVVYRDLKPANILLDEHGHVRISDLGLACD  341 (689)
T ss_dssp             EEEECCCCSCBHHHHHHHHC---CCCHHHHHHHHHHHHHHHHHHHT---TTEECCCCSGGGEEECTTSCEEECCCTTCEE
T ss_pred             EEEEecCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHH---CCccccCCchHHeEEeCCCCEEecccceeee
Confidence            99999999999999997654   69999999999999999999998   9999999999999999999999999999987


Q ss_pred             cCCCCcceeeeeeccccCCCcccccc-CCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhHHHHHh
Q 005257          518 HGHGQVASTTRVVGTVGYLAPEVFSS-GRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDAR  596 (705)
Q Consensus       518 ~~~~~~~~~~~~~gt~~y~APE~~~~-~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~  596 (705)
                      .....   ....+||+.|||||++.. ..|+.++||||+||++|||++|+.||..........+....            
T Consensus       342 ~~~~~---~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~~~~i~~~i------------  406 (689)
T 3v5w_A          342 FSKKK---PHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMT------------  406 (689)
T ss_dssp             CSSCC---CCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCCHHHHHHHH------------
T ss_pred             cCCCC---CCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhh------------
Confidence            75433   234689999999999965 57999999999999999999999999754321111111111            


Q ss_pred             hhcCCCCCHHHHHHHHHHHHHcCCCCCCCCCC-----HHHHHH
Q 005257          597 LRAKGGFDEDEVERVLHLGLLCAYPDPRARPT-----MRQVVK  634 (705)
Q Consensus       597 l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs-----~~evl~  634 (705)
                      +.....++......+.+|+..||+.||.+|++     +.||++
T Consensus       407 ~~~~~~~p~~~S~~a~dLI~~lL~~dP~~Rl~~~~~ga~ei~~  449 (689)
T 3v5w_A          407 LTMAVELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKE  449 (689)
T ss_dssp             HHCCCCCCTTSCHHHHHHHHHHTCSCGGGCTTCSSSTHHHHTT
T ss_pred             cCCCCCCCccCCHHHHHHHHHHccCCHhHCCCCCCCCHHHHhc
Confidence            11112333344567889999999999999998     677765

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}

Probab=100.00  E-value=3.7e-43  Score=371.81  Aligned_cols=261  Identities=25%  Similarity=0.409  Sum_probs=214.8

Q ss_pred             hCCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCCchhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEEEEe
Q 005257          363 TKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYD  442 (705)
Q Consensus       363 t~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~lV~E  442 (705)
                      .++|...+.||+|+||+||+|.+..+++.||+|++........+.+.+|++++++++||||+++++++.. ++..++|||
T Consensus         9 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~~lv~e   87 (310)
T 3s95_A            9 PSDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYK-DKRLNFITE   87 (310)
T ss_dssp             GGGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEE-TTEEEEEEE
T ss_pred             hhHeeccceecCCCCEEEEEEEECCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCcCcccEEEEEec-CCeeEEEEE
Confidence            3567889999999999999999999999999999977677778889999999999999999999999986 678999999


Q ss_pred             eCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecCCCC
Q 005257          443 YMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQ  522 (705)
Q Consensus       443 ~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~~~~  522 (705)
                      |+++|+|.+++.....  .+++.+++.++.|++.||.|||+   .+|+||||||+|||++.++.+||+|||+++......
T Consensus        88 ~~~~~~L~~~l~~~~~--~~~~~~~~~i~~qi~~al~~lH~---~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~  162 (310)
T 3s95_A           88 YIKGGTLRGIIKSMDS--QYPWSQRVSFAKDIASGMAYLHS---MNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEK  162 (310)
T ss_dssp             CCTTCBHHHHHHHCCT--TSCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSTTSEEECTTSCEEECCCTTCEECC---
T ss_pred             ecCCCcHHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHh---CCccCCCCCcCeEEECCCCCEEEeecccceeccccc
Confidence            9999999999987443  69999999999999999999999   999999999999999999999999999998765433


Q ss_pred             cce-------------eeeeeccccCCCccccccCCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCch
Q 005257          523 VAS-------------TTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKL  589 (705)
Q Consensus       523 ~~~-------------~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~  589 (705)
                      ...             .....||+.|+|||++.+..++.++|||||||++|||++|..|+..........      ....
T Consensus       163 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~------~~~~  236 (310)
T 3s95_A          163 TQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDF------GLNV  236 (310)
T ss_dssp             -----------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTTS------SBCH
T ss_pred             ccccccccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHHH------hhhh
Confidence            211             113579999999999999999999999999999999999999987533210000      0001


Q ss_pred             hHHHHHhhhcCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHhccc
Q 005257          590 LDALDARLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLEGKIE  641 (705)
Q Consensus       590 ~~~id~~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~  641 (705)
                      ....+..      .+......+.+++..||+.||++|||+.++++.|+....
T Consensus       237 ~~~~~~~------~~~~~~~~l~~li~~~l~~dP~~Rps~~~l~~~L~~l~~  282 (310)
T 3s95_A          237 RGFLDRY------CPPNCPPSFFPITVRCCDLDPEKRPSFVKLEHWLETLRM  282 (310)
T ss_dssp             HHHHHHT------CCTTCCTTHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             hcccccc------CCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHH
Confidence            1111111      122233568889999999999999999999999987654

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*

Probab=100.00  E-value=1.2e-42  Score=366.14  Aligned_cols=252  Identities=23%  Similarity=0.375  Sum_probs=212.4

Q ss_pred             hCCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCCchhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEEEEe
Q 005257          363 TKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYD  442 (705)
Q Consensus       363 t~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~lV~E  442 (705)
                      .++|...+.||+|+||+||+|.+..+++.||||++........+.+.+|+.+++.++||||+++++++.. .+..++|||
T Consensus        19 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~~lv~e   97 (297)
T 3fxz_A           19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLV-GDELWVVME   97 (297)
T ss_dssp             GGTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEE-TTEEEEEEE
T ss_pred             hhceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeecccccHHHHHHHHHHHHhcCCCCCCCeEeEEEEE-CCEEEEEEE
Confidence            4679999999999999999999998999999999977666667789999999999999999999999886 678999999


Q ss_pred             eCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecCCCC
Q 005257          443 YMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQ  522 (705)
Q Consensus       443 ~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~~~~  522 (705)
                      |+++|+|.+++...    .+++.++..++.|++.||.|||+   .+|+||||||+|||++.++.+||+|||+++......
T Consensus        98 ~~~~~~L~~~~~~~----~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~  170 (297)
T 3fxz_A           98 YLAGGSLTDVVTET----CMDEGQIAAVCRECLQALEFLHS---NQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ  170 (297)
T ss_dssp             CCTTCBHHHHHHHS----CCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTCCEEECCCTTCEECCSTT
T ss_pred             CCCCCCHHHHHhhc----CCCHHHHHHHHHHHHHHHHHHHh---CCceeCCCCHHHEEECCCCCEEEeeCCCceecCCcc
Confidence            99999999999753    48999999999999999999999   999999999999999999999999999998765443


Q ss_pred             cceeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhHHHHHhhhcCCC
Q 005257          523 VASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRAKGG  602 (705)
Q Consensus       523 ~~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~l~~~~~  602 (705)
                      .. .....||+.|+|||++.+..++.++|||||||++|||++|+.||......  +........+.          ....
T Consensus       171 ~~-~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~--~~~~~~~~~~~----------~~~~  237 (297)
T 3fxz_A          171 SK-RSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPL--RALYLIATNGT----------PELQ  237 (297)
T ss_dssp             CC-BCCCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH--HHHHHHHHHCS----------CCCS
T ss_pred             cc-cCCccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH--HHHHHHHhCCC----------CCCC
Confidence            32 33457999999999999999999999999999999999999999765431  11111111111          0011


Q ss_pred             CCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 005257          603 FDEDEVERVLHLGLLCAYPDPRARPTMRQVVKV  635 (705)
Q Consensus       603 ~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  635 (705)
                      .+......+.+++..||+.||++|||+.|++++
T Consensus       238 ~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h  270 (297)
T 3fxz_A          238 NPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQH  270 (297)
T ss_dssp             CGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred             CccccCHHHHHHHHHHccCChhHCcCHHHHhhC
Confidence            223344668899999999999999999999874

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*

Probab=100.00  E-value=4.4e-43  Score=371.80  Aligned_cols=271  Identities=25%  Similarity=0.444  Sum_probs=207.7

Q ss_pred             CcccCHHHHHHHhCCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCC--chhHHHHHHHHHHhccCCCCCcceeee
Q 005257          351 PHRITYQEIEAATKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHEN--DGGTRAFLAEISSLGRLKHKSLVGLRG  428 (705)
Q Consensus       351 ~~~~~~~el~~at~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~--~~~~~~~~~Ei~~l~~l~Hpniv~l~g  428 (705)
                      +..+...++....++|+..+.||+|+||+||+|.+.  +..||||++....  ....+.+.+|++++++++||||+++++
T Consensus        24 ~~~~~~~~~~i~~~~y~i~~~lG~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~  101 (309)
T 3p86_A           24 QGAMDGDDMDIPWCDLNIKEKIGAGSFGTVHRAEWH--GSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMG  101 (309)
T ss_dssp             --------CBCCGGGEEEEEEEEECSSEEEEEEEET--TEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEE
T ss_pred             ccCCCcccccCChhHceeeeEeecCCCeEEEEEEEC--CCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEE
Confidence            344455555566678999999999999999999874  7889999987653  334567999999999999999999999


Q ss_pred             eeeeccCceEEEEeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCC--eeecCCCCCCeEEccCCC
Q 005257          429 WCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKK--VLHRDIKSSNVLLDKEMN  506 (705)
Q Consensus       429 ~~~~~~~~~~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~--iiHrDLkp~NILld~~~~  506 (705)
                      ++.. ....++||||+++|+|.+++........+++..++.++.|++.||.|||+   .+  |+||||||+|||++.++.
T Consensus       102 ~~~~-~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~~~ivH~Dikp~NIll~~~~~  177 (309)
T 3p86_A          102 AVTQ-PPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHN---RNPPIVHRNLKSPNLLVDKKYT  177 (309)
T ss_dssp             EECS-TTCCEEEEECCTTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHHT---SSSCCCCTTCCGGGEEECTTCC
T ss_pred             EEEE-CCceEEEEecCCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHc---CCCCEECCCCChhhEEEeCCCc
Confidence            9876 66789999999999999999765433359999999999999999999998   78  999999999999999999


Q ss_pred             eeeeeeccceecCCCCcceeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHh
Q 005257          507 GRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQ  586 (705)
Q Consensus       507 ~kL~DFGla~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~  586 (705)
                      +||+|||+++...... .......||+.|+|||++.+..++.++|||||||++|||++|+.||......  +........
T Consensus       178 ~kL~Dfg~a~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~~~~--~~~~~~~~~  254 (309)
T 3p86_A          178 VKVCDFGLSRLKASTF-LSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPA--QVVAAVGFK  254 (309)
T ss_dssp             EEECCCC------------------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTSCHH--HHHHHHHHS
T ss_pred             EEECCCCCCccccccc-cccccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH--HHHHHHHhc
Confidence            9999999998654332 2233467999999999999999999999999999999999999999865431  111111001


Q ss_pred             CchhHHHHHhhhcCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHhccc
Q 005257          587 GKLLDALDARLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLEGKIE  641 (705)
Q Consensus       587 ~~~~~~id~~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~  641 (705)
                      .           .....+......+.+++..||+.||++|||+.++++.|+..++
T Consensus       255 ~-----------~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~~L~~~~~  298 (309)
T 3p86_A          255 C-----------KRLEIPRNLNPQVAAIIEGCWTNEPWKRPSFATIMDLLRPLIK  298 (309)
T ss_dssp             C-----------CCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHC
T ss_pred             C-----------CCCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHH
Confidence            0           0122333445678899999999999999999999999998766

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*

Probab=100.00  E-value=3.6e-42  Score=366.73  Aligned_cols=265  Identities=22%  Similarity=0.329  Sum_probs=217.8

Q ss_pred             CcccCHHHHHHHhCC----------CCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCCchhHHHHHHHHHHhccCCC
Q 005257          351 PHRITYQEIEAATKG----------FSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLKH  420 (705)
Q Consensus       351 ~~~~~~~el~~at~~----------f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~~~~~~~~~Ei~~l~~l~H  420 (705)
                      +..+++++++.+++.          |...+.||+|+||.||+|.+..+|+.||||++........+.+.+|+.++++++|
T Consensus        22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h  101 (321)
T 2c30_A           22 SGVVTHEQFKAALRMVVDQGDPRLLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQH  101 (321)
T ss_dssp             ---CCHHHHHHHHHTTSCSSCHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCSHHHHHHHHHHHTTCCC
T ss_pred             CCcCcHHHHHHHHhhccCCCCchhhhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccchhHHHHHHHHHHHHHhCCC
Confidence            356788888887764          6667899999999999999998899999999987766677889999999999999


Q ss_pred             CCcceeeeeeeeccCceEEEEeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeE
Q 005257          421 KSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVL  500 (705)
Q Consensus       421 pniv~l~g~~~~~~~~~~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NIL  500 (705)
                      |||+++++++.. .+..++||||+++++|.+++.+    ..+++.++..++.|++.||.|||+   .+|+||||||+|||
T Consensus       102 ~niv~~~~~~~~-~~~~~lv~e~~~~~~L~~~l~~----~~l~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dlkp~NIl  173 (321)
T 2c30_A          102 FNVVEMYKSYLV-GEELWVLMEFLQGGALTDIVSQ----VRLNEEQIATVCEAVLQALAYLHA---QGVIHRDIKSDSIL  173 (321)
T ss_dssp             TTBCCEEEEEEE-TTEEEEEECCCCSCBHHHHHTT----CCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEE
T ss_pred             CCcceEEEEEEE-CCEEEEEEecCCCCCHHHHHHh----cCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEE
Confidence            999999999886 6789999999999999999853    258999999999999999999999   99999999999999


Q ss_pred             EccCCCeeeeeeccceecCCCCcceeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHH
Q 005257          501 LDKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMV  580 (705)
Q Consensus       501 ld~~~~~kL~DFGla~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v  580 (705)
                      ++.++.+||+|||+++....... ......||+.|+|||++.+..++.++|||||||++|||++|+.||......  + .
T Consensus       174 l~~~~~~kl~Dfg~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~--~-~  249 (321)
T 2c30_A          174 LTLDGRVKLSDFGFCAQISKDVP-KRKSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSPV--Q-A  249 (321)
T ss_dssp             ECTTCCEEECCCTTCEECCSSSC-CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH--H-H
T ss_pred             ECCCCcEEEeeeeeeeecccCcc-ccccccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH--H-H
Confidence            99999999999999987654332 223467999999999999989999999999999999999999999765431  1 1


Q ss_pred             HHHHHhCchhHHHHHhhhcCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Q 005257          581 WELMVQGKLLDALDARLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVL  636 (705)
Q Consensus       581 ~~~~~~~~~~~~id~~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L  636 (705)
                      ...+......     .    ..........+.+++..||+.||++|||+.|++++-
T Consensus       250 ~~~~~~~~~~-----~----~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~hp  296 (321)
T 2c30_A          250 MKRLRDSPPP-----K----LKNSHKVSPVLRDFLERMLVRDPQERATAQELLDHP  296 (321)
T ss_dssp             HHHHHHSSCC-----C----CTTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHHTSG
T ss_pred             HHHHhcCCCC-----C----cCccccCCHHHHHHHHHHccCChhhCcCHHHHhcCh
Confidence            1111111100     0    011112345688899999999999999999998853

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*

Probab=100.00  E-value=6.9e-42  Score=361.14  Aligned_cols=280  Identities=32%  Similarity=0.566  Sum_probs=228.2

Q ss_pred             CcccCHHHHHHHhCCCCcc------eEEeecCceEEEEEEEcCCCeEEEEEEeccC----CchhHHHHHHHHHHhccCCC
Q 005257          351 PHRITYQEIEAATKGFSEE------NVIGVGGNGKVYKGVLEGGGAEIAVKRISHE----NDGGTRAFLAEISSLGRLKH  420 (705)
Q Consensus       351 ~~~~~~~el~~at~~f~~~------~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~----~~~~~~~~~~Ei~~l~~l~H  420 (705)
                      ...|++.++..++++|...      +.||+|+||.||+|..  +++.||||++...    .....+.+.+|+.++++++|
T Consensus        12 ~~~~~~~~l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h   89 (307)
T 2nru_A           12 FHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV--NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQH   89 (307)
T ss_dssp             CEECCHHHHHHHTTTTCCSBTTTTCCEEEECSSEEEEEEES--SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCC
T ss_pred             CCcccHHHHHHHHcccccccccccCCccccCCCeEEEEEEE--CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCC
Confidence            3678999999999999988      9999999999999987  4788999998653    23346779999999999999


Q ss_pred             CCcceeeeeeeeccCceEEEEeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeE
Q 005257          421 KSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVL  500 (705)
Q Consensus       421 pniv~l~g~~~~~~~~~~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NIL  500 (705)
                      |||+++++++.. .+..++||||+++|+|.+++........+++..++.++.|++.||.|||+   .+|+||||||+||+
T Consensus        90 ~~i~~~~~~~~~-~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~---~~i~H~dlkp~Nil  165 (307)
T 2nru_A           90 ENLVELLGFSSD-GDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHE---NHHIHRDIKSANIL  165 (307)
T ss_dssp             TTBCCEEEEECS-SSSCEEEEECCTTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEE
T ss_pred             CCeEEEEEEEec-CCceEEEEEecCCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhc---CCeecCCCCHHHEE
Confidence            999999999876 66889999999999999999765444579999999999999999999998   99999999999999


Q ss_pred             EccCCCeeeeeeccceecCCCCcc-eeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhhCCCCCCCCCcc-HHH
Q 005257          501 LDKEMNGRLGDFGLARMHGHGQVA-STTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPN-LVE  578 (705)
Q Consensus       501 ld~~~~~kL~DFGla~~~~~~~~~-~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~-~~~  578 (705)
                      ++.++.+||+|||+++........ ......||+.|+|||.+.+ .++.++|||||||++|||++|+.||...... ...
T Consensus       166 i~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~  244 (307)
T 2nru_A          166 LDEAFTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLL  244 (307)
T ss_dssp             ECTTCCEEECCCTTCEECCSCSSCEECSSCCSCGGGCCHHHHTT-EECTHHHHHHHHHHHHHHHHCCCSBCTTBSSSBTT
T ss_pred             EcCCCcEEEeecccccccccccccccccccCCCcCcCChHHhcC-CCCccchhHHHHHHHHHHHHCCCCcccCcchHHHH
Confidence            999999999999999876543322 2233578999999998865 5889999999999999999999999764321 111


Q ss_pred             HHHHHHHh-C-chhHHHHHhhhcCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHhcc
Q 005257          579 MVWELMVQ-G-KLLDALDARLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLEGKI  640 (705)
Q Consensus       579 ~v~~~~~~-~-~~~~~id~~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~  640 (705)
                      .+...... . .+.+.+++.+   ...+......+.+++..||+.||.+|||+.++++.|+++.
T Consensus       245 ~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~l~~~L~~l~  305 (307)
T 2nru_A          245 DIKEEIEDEEKTIEDYIDKKM---NDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEMT  305 (307)
T ss_dssp             HHHHHHHTTSCCHHHHSCSSC---SCCCHHHHHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHC
T ss_pred             HHHHHhhhhhhhhhhhccccc---cccchHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHh
Confidence            11122211 1 1222222222   3456777889999999999999999999999999998653

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A

Probab=100.00  E-value=2.2e-42  Score=369.69  Aligned_cols=249  Identities=24%  Similarity=0.382  Sum_probs=209.6

Q ss_pred             hCCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccC--CchhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEEE
Q 005257          363 TKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHE--NDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLV  440 (705)
Q Consensus       363 t~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~--~~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~lV  440 (705)
                      .++|...+.||+|+||.||+|.+..+++.||||++...  .....+.+.+|+++++.++||||+++++++.. .+.+++|
T Consensus        14 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~-~~~~~lv   92 (328)
T 3fe3_A           14 IGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIET-EKTLYLI   92 (328)
T ss_dssp             ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEC-SSEEEEE
T ss_pred             cCCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEE-CCEEEEE
Confidence            45789999999999999999999989999999999654  33456778999999999999999999999876 6789999


Q ss_pred             EeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecCC
Q 005257          441 YDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGH  520 (705)
Q Consensus       441 ~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~~  520 (705)
                      |||+++|+|.+++....   .+++.++..++.|++.||.|||+   .+|+||||||+|||++.++++||+|||+++....
T Consensus        93 ~e~~~~~~L~~~l~~~~---~l~~~~~~~~~~qi~~al~~lH~---~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~  166 (328)
T 3fe3_A           93 MEYASGGEVFDYLVAHG---RMKEKEARSKFRQIVSAVQYCHQ---KRIVHRDLKAENLLLDADMNIKIADFGFSNEFTV  166 (328)
T ss_dssp             ECCCTTCBHHHHHHHHC---CCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTSCEEECSTTCCGGGSS
T ss_pred             EECCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHH---CCEeccCCCHHHEEEcCCCCEEEeeccCceecCC
Confidence            99999999999997654   58999999999999999999999   9999999999999999999999999999987654


Q ss_pred             CCcceeeeeeccccCCCccccccCCCC-ccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhHHHHHhhhc
Q 005257          521 GQVASTTRVVGTVGYLAPEVFSSGRAS-TQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRA  599 (705)
Q Consensus       521 ~~~~~~~~~~gt~~y~APE~~~~~~~s-~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~l~~  599 (705)
                      ...  ....+||+.|+|||++.+..+. .++|||||||++|||++|+.||.....   ......+..+.           
T Consensus       167 ~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~---~~~~~~i~~~~-----------  230 (328)
T 3fe3_A          167 GGK--LDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNL---KELRERVLRGK-----------  230 (328)
T ss_dssp             SCG--GGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSSH---HHHHHHHHHCC-----------
T ss_pred             CCc--cccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCCH---HHHHHHHHhCC-----------
Confidence            432  2335799999999999887765 799999999999999999999986542   11222222221           


Q ss_pred             CCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 005257          600 KGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKV  635 (705)
Q Consensus       600 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  635 (705)
                       ...+......+.+++..||+.||.+|||+.|++++
T Consensus       231 -~~~p~~~s~~~~~li~~~L~~dP~~R~t~~eil~h  265 (328)
T 3fe3_A          231 -YRIPFYMSTDCENLLKRFLVLNPIKRGTLEQIMKD  265 (328)
T ss_dssp             -CCCCTTSCHHHHHHHHHHCCSSTTTSCCHHHHTTC
T ss_pred             -CCCCCCCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence             12222334567889999999999999999999874

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*

Probab=100.00  E-value=1.8e-42  Score=373.89  Aligned_cols=271  Identities=24%  Similarity=0.367  Sum_probs=220.0

Q ss_pred             CHHHHHHHhCCCCcceEEeecCceEEEEEEE-----cCCCeEEEEEEeccCC-chhHHHHHHHHHHhccC-CCCCcceee
Q 005257          355 TYQEIEAATKGFSEENVIGVGGNGKVYKGVL-----EGGGAEIAVKRISHEN-DGGTRAFLAEISSLGRL-KHKSLVGLR  427 (705)
Q Consensus       355 ~~~el~~at~~f~~~~~LG~G~fg~Vy~~~~-----~~~~~~vavK~i~~~~-~~~~~~~~~Ei~~l~~l-~Hpniv~l~  427 (705)
                      ...+++...++|...+.||+|+||.||+|.+     ..+++.||||+++... ....+.+.+|++++.++ +||||++++
T Consensus        13 ~~~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~   92 (359)
T 3vhe_A           13 DASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLL   92 (359)
T ss_dssp             CHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEE
T ss_pred             CcccccccccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCcceeeee
Confidence            4455666778899999999999999999994     4556899999997653 34456799999999999 799999999


Q ss_pred             eeeeeccCceEEEEeeCCCCChhHHHHhcCC-------------------------------------------------
Q 005257          428 GWCKREKGSLMLVYDYMENGSLDKWIFQCDG-------------------------------------------------  458 (705)
Q Consensus       428 g~~~~~~~~~~lV~E~~~~gsL~~~L~~~~~-------------------------------------------------  458 (705)
                      ++|......+++||||+++|+|.+++.....                                                 
T Consensus        93 ~~~~~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  172 (359)
T 3vhe_A           93 GACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEKS  172 (359)
T ss_dssp             EEECSTTSCCEEEEECCTTEEHHHHHHTTTTSBCSCC-------------------------------------------
T ss_pred             eeeecCCCceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCccccccccccccccc
Confidence            9998766668999999999999999976432                                                 


Q ss_pred             --------------CCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecCCCCc-
Q 005257          459 --------------SMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQV-  523 (705)
Q Consensus       459 --------------~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~~~~~-  523 (705)
                                    ...+++..++.++.|++.||.|||+   ++|+||||||+|||++.++.+||+|||+++....... 
T Consensus       173 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~---~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~  249 (359)
T 3vhe_A          173 LSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLAS---RKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDY  249 (359)
T ss_dssp             -----------CTTTTCBCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECGGGCEEECCCGGGSCTTSCTTC
T ss_pred             cchhhhcccccchhccccCHHHHHHHHHHHHHHHHHHHH---CCcccCCCChhhEEEcCCCcEEEEeccceeeecccccc
Confidence                          1128999999999999999999999   9999999999999999999999999999986644322 


Q ss_pred             ceeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhh-CCCCCCCCCccHHHHHHHHHHhCchhHHHHHhhhcCCC
Q 005257          524 ASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLS-GRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRAKGG  602 (705)
Q Consensus       524 ~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~Ellt-G~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~l~~~~~  602 (705)
                      .......||+.|+|||++.+..++.++|||||||++|||++ |+.||......  +.+...+..+..           ..
T Consensus       250 ~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~--~~~~~~~~~~~~-----------~~  316 (359)
T 3vhe_A          250 VRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID--EEFCRRLKEGTR-----------MR  316 (359)
T ss_dssp             EEC--CEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCS--HHHHHHHHHTCC-----------CC
T ss_pred             hhccccCCCceeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccchh--HHHHHHHHcCCC-----------CC
Confidence            23344678999999999999999999999999999999998 99999765432  122222222111           12


Q ss_pred             CCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHhccc
Q 005257          603 FDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLEGKIE  641 (705)
Q Consensus       603 ~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~  641 (705)
                      .+......+.+++..||+.||++|||+.|++++|+..++
T Consensus       317 ~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~  355 (359)
T 3vhe_A          317 APDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ  355 (359)
T ss_dssp             CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             CCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHHH
Confidence            223344568899999999999999999999999997765

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}

Probab=100.00  E-value=7.3e-42  Score=359.61  Aligned_cols=262  Identities=22%  Similarity=0.370  Sum_probs=209.6

Q ss_pred             hCCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCC---chhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEE
Q 005257          363 TKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHEN---DGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLML  439 (705)
Q Consensus       363 t~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~---~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~l  439 (705)
                      .++|+..+.||+|+||.||+|.+..+++.||+|++....   ....+.+.+|+.++.+++||||+++++++.. .+..++
T Consensus        10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~-~~~~~l   88 (294)
T 4eqm_A           10 NERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEE-DDCYYL   88 (294)
T ss_dssp             ETTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEEC-SSEEEE
T ss_pred             hccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeee-CCeEEE
Confidence            457889999999999999999999999999999986542   3345678999999999999999999998875 678999


Q ss_pred             EEeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecC
Q 005257          440 VYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHG  519 (705)
Q Consensus       440 V~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~  519 (705)
                      ||||+++++|.+++....   .+++.+++.++.|++.||.|||+   .+|+||||||+|||++.++.+||+|||+++...
T Consensus        89 v~e~~~g~~L~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~  162 (294)
T 4eqm_A           89 VMEYIEGPTLSEYIESHG---PLSVDTAINFTNQILDGIKHAHD---MRIVHRDIKPQNILIDSNKTLKIFDFGIAKALS  162 (294)
T ss_dssp             EEECCCSCBHHHHHHHHC---SCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTSCEEECCCSSSTTC-
T ss_pred             EEeCCCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEECCCCCEEEEeCCCccccc
Confidence            999999999999997654   68999999999999999999998   999999999999999999999999999998765


Q ss_pred             CCCcceeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhHHHHHhhhc
Q 005257          520 HGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRA  599 (705)
Q Consensus       520 ~~~~~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~l~~  599 (705)
                      ...........||+.|+|||.+.+..++.++|||||||++|||++|+.||......  +........ ..... ...   
T Consensus       163 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~--~~~~~~~~~-~~~~~-~~~---  235 (294)
T 4eqm_A          163 ETSLTQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAV--SIAIKHIQD-SVPNV-TTD---  235 (294)
T ss_dssp             ------------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSCHH--HHHHHHHSS-CCCCH-HHH---
T ss_pred             cccccccCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChH--HHHHHHhhc-cCCCc-chh---
Confidence            54444444567999999999999989999999999999999999999999865431  111122211 11111 011   


Q ss_pred             CCCCCHHHHHHHHHHHHHcCCCCCCCCC-CHHHHHHHHHhccc
Q 005257          600 KGGFDEDEVERVLHLGLLCAYPDPRARP-TMRQVVKVLEGKIE  641 (705)
Q Consensus       600 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RP-s~~evl~~L~~~~~  641 (705)
                         .....+..+.+++.+|++.||++|| +++++.+.|+....
T Consensus       236 ---~~~~~~~~l~~li~~~l~~dp~~R~~~~~~l~~~l~~~~~  275 (294)
T 4eqm_A          236 ---VRKDIPQSLSNVILRATEKDKANRYKTIQEMKDDLSSVLH  275 (294)
T ss_dssp             ---SCTTSCHHHHHHHHHHSCSSGGGSCSSHHHHHHHHHTSSS
T ss_pred             ---cccCCCHHHHHHHHHHhcCCHhHccccHHHHHHHHHHHHh
Confidence               1122345688999999999999998 99999999987655

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}

Probab=100.00  E-value=2.8e-42  Score=368.23  Aligned_cols=258  Identities=32%  Similarity=0.490  Sum_probs=210.2

Q ss_pred             CCCCcceEEeecCceEEEEEEEcCCC---eEEEEEEeccC-CchhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEE
Q 005257          364 KGFSEENVIGVGGNGKVYKGVLEGGG---AEIAVKRISHE-NDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLML  439 (705)
Q Consensus       364 ~~f~~~~~LG~G~fg~Vy~~~~~~~~---~~vavK~i~~~-~~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~l  439 (705)
                      ++|...+.||+|+||.||+|.+..++   ..||||+++.. .....+.+.+|+.++++++||||+++++++.. .+..++
T Consensus        49 ~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-~~~~~l  127 (325)
T 3kul_A           49 SRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTR-GRLAMI  127 (325)
T ss_dssp             GGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECG-GGCCEE
T ss_pred             hHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEe-CCccEE
Confidence            45777899999999999999997544   46999999765 33456789999999999999999999999876 667899


Q ss_pred             EEeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecC
Q 005257          440 VYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHG  519 (705)
Q Consensus       440 V~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~  519 (705)
                      ||||+++|+|.+++.....  .+++.+++.++.|++.||.|||+   .+|+||||||+|||++.++.+||+|||+++...
T Consensus       128 v~e~~~~~~L~~~l~~~~~--~~~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~  202 (325)
T 3kul_A          128 VTEYMENGSLDTFLRTHDG--QFTIMQLVGMLRGVGAGMRYLSD---LGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLE  202 (325)
T ss_dssp             EEECCTTCBHHHHHHTTTT--CSCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTCCEEECCCSSCEECC
T ss_pred             EeeCCCCCcHHHHHHhccc--CCCHHHHHHHHHHHHHHHHHHHH---CCeeCCCCCcceEEECCCCCEEECCCCcccccc
Confidence            9999999999999975433  69999999999999999999999   999999999999999999999999999998775


Q ss_pred             CCCcce--eeeeeccccCCCccccccCCCCccccEEEEehhHHHHhh-CCCCCCCCCccHHHHHHHHHHhCchhHHHHHh
Q 005257          520 HGQVAS--TTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLS-GRRPIEEGKPNLVEMVWELMVQGKLLDALDAR  596 (705)
Q Consensus       520 ~~~~~~--~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~Ellt-G~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~  596 (705)
                      ......  .....+|+.|+|||++.+..++.++|||||||++|||++ |+.||......   .+...+..+         
T Consensus       203 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~---~~~~~~~~~---------  270 (325)
T 3kul_A          203 DDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNR---DVISSVEEG---------  270 (325)
T ss_dssp             ----CCEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTSCHH---HHHHHHHTT---------
T ss_pred             cCccceeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccCCHH---HHHHHHHcC---------
Confidence            433222  223456788999999998899999999999999999999 99999765431   111222211         


Q ss_pred             hhcCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHhccc
Q 005257          597 LRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLEGKIE  641 (705)
Q Consensus       597 l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~  641 (705)
                      ..  ...+......+.+++..||+.||++|||+.++++.|+....
T Consensus       271 ~~--~~~~~~~~~~l~~li~~~l~~dp~~Rps~~eil~~L~~l~~  313 (325)
T 3kul_A          271 YR--LPAPMGCPHALHQLMLDCWHKDRAQRPRFSQIVSVLDALIR  313 (325)
T ss_dssp             CC--CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             CC--CCCCCCcCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence            11  22233445678899999999999999999999999998776

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*

Probab=100.00  E-value=3.2e-42  Score=367.12  Aligned_cols=270  Identities=26%  Similarity=0.326  Sum_probs=207.4

Q ss_pred             HhCCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCCchhHHHHHHHHHHhccCCCCCcceeeeeeeeccC---ceE
Q 005257          362 ATKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKG---SLM  438 (705)
Q Consensus       362 at~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~---~~~  438 (705)
                      ..++|+..++||+|+||+||+|.+.  ++.||||++.... .....+.+|+.++.+++||||+++++++.....   .++
T Consensus        22 ~~~~y~~~~~lg~G~~g~Vy~~~~~--~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~   98 (322)
T 3soc_A           22 QSMPLQLLEVKARGRFGCVWKAQLL--NEYVAVKIFPIQD-KQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLW   98 (322)
T ss_dssp             TTEEEEEEEEEECSTTCEEEEEEET--TEEEEEEEECGGG-HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEE
T ss_pred             chhhchhhheecccCceEEEEEEEC--CCEEEEEEeecCc-hHHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceEE
Confidence            3467889999999999999999886  7899999986442 334556779999999999999999999876432   379


Q ss_pred             EEEeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCC----------CeeecCCCCCCeEEccCCCee
Q 005257          439 LVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEK----------KVLHRDIKSSNVLLDKEMNGR  508 (705)
Q Consensus       439 lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~----------~iiHrDLkp~NILld~~~~~k  508 (705)
                      +||||+++|+|.+++...    .+++.+++.++.|++.||.|||+   .          +|+||||||+|||++.++.+|
T Consensus        99 lv~e~~~~g~L~~~l~~~----~~~~~~~~~i~~qi~~al~~LH~---~~~~l~~~~~~~ivH~Dlkp~Nill~~~~~~k  171 (322)
T 3soc_A           99 LITAFHEKGSLSDFLKAN----VVSWNELCHIAETMARGLAYLHE---DIPGLKDGHKPAISHRDIKSKNVLLKNNLTAC  171 (322)
T ss_dssp             EEEECCTTCBHHHHHHHC----CBCHHHHHHHHHHHHHHHHHHTC---CEEEETTEEECEEECSCCSGGGEEECTTCCEE
T ss_pred             EEEecCCCCCHHHHHHhc----CCCHHHHHHHHHHHHHHHHHHHh---hccccccccCCCEEeCCCChHhEEECCCCeEE
Confidence            999999999999999653    48999999999999999999998   6          999999999999999999999


Q ss_pred             eeeeccceecCCCCcc-eeeeeeccccCCCccccccC-----CCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHH
Q 005257          509 LGDFGLARMHGHGQVA-STTRVVGTVGYLAPEVFSSG-----RASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWE  582 (705)
Q Consensus       509 L~DFGla~~~~~~~~~-~~~~~~gt~~y~APE~~~~~-----~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~  582 (705)
                      |+|||+++........ ......||+.|+|||++.+.     .++.++|||||||++|||++|+.||.............
T Consensus       172 L~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~  251 (322)
T 3soc_A          172 IADFGLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEE  251 (322)
T ss_dssp             ECCCTTCEEECTTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCCTTHH
T ss_pred             EccCCcccccccccCccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchhccchhh
Confidence            9999999876544322 22335799999999999763     45678899999999999999999997532210000000


Q ss_pred             HHHhCchhHHHHHhh-hc--CCCC-----CHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHhccc
Q 005257          583 LMVQGKLLDALDARL-RA--KGGF-----DEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLEGKIE  641 (705)
Q Consensus       583 ~~~~~~~~~~id~~l-~~--~~~~-----~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~  641 (705)
                      ..........+.... ..  ....     .......+.+++..||+.||++|||+.|+++.|+.+.+
T Consensus       252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~~  318 (322)
T 3soc_A          252 EIGQHPSLEDMQEVVVHKKKRPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAGCVGERITQMQR  318 (322)
T ss_dssp             HHCSSCCHHHHHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             hhccCCchhhhhhhhhcccCCCCccccccccchHHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHH
Confidence            001111111111111 00  0111     12456679999999999999999999999999987644

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...

Probab=100.00  E-value=8.4e-42  Score=366.41  Aligned_cols=249  Identities=24%  Similarity=0.339  Sum_probs=208.8

Q ss_pred             CCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccC---CchhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEEE
Q 005257          364 KGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHE---NDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLV  440 (705)
Q Consensus       364 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~---~~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~lV  440 (705)
                      ++|...+.||+|+||+||+|....+++.||||+++..   .....+.+.+|+.+++.++||||+++++++.. .+.+++|
T Consensus         5 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~-~~~~~lv   83 (337)
T 1o6l_A            5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQT-HDRLCFV   83 (337)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEEC-SSEEEEE
T ss_pred             HHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEe-CCEEEEE
Confidence            5688899999999999999999999999999999654   23345678999999999999999999998876 6789999


Q ss_pred             EeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecCC
Q 005257          441 YDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGH  520 (705)
Q Consensus       441 ~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~~  520 (705)
                      |||+++|+|..++.+..   .+++.++..++.||+.||.|||+   ++|+||||||+|||++.++.+||+|||+++....
T Consensus        84 ~E~~~gg~L~~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~  157 (337)
T 1o6l_A           84 MEYANGGELFFHLSRER---VFTEERARFYGAEIVSALEYLHS---RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGIS  157 (337)
T ss_dssp             EECCTTCBHHHHHHHHS---CCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTSCEEECCCTTCBCSCC
T ss_pred             EeCCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHH---CCeecCcCCHHHEEECCCCCEEEeeccchhhccc
Confidence            99999999999997643   68999999999999999999998   9999999999999999999999999999986433


Q ss_pred             CCcceeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhHHHHHhhhcC
Q 005257          521 GQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRAK  600 (705)
Q Consensus       521 ~~~~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~l~~~  600 (705)
                      ... .....+||+.|+|||++.+..++.++|||||||++|||++|+.||......   .....+..+.            
T Consensus       158 ~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~---~~~~~i~~~~------------  221 (337)
T 1o6l_A          158 DGA-TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE---RLFELILMEE------------  221 (337)
T ss_dssp             TTC-CBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHH---HHHHHHHHCC------------
T ss_pred             CCC-cccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCCCHH---HHHHHHHcCC------------
Confidence            222 233468999999999999989999999999999999999999999765421   1122222111            


Q ss_pred             CCCCHHHHHHHHHHHHHcCCCCCCCCC-----CHHHHHHH
Q 005257          601 GGFDEDEVERVLHLGLLCAYPDPRARP-----TMRQVVKV  635 (705)
Q Consensus       601 ~~~~~~~~~~l~~l~~~Cl~~dP~~RP-----s~~evl~~  635 (705)
                      ..++......+.+++..||+.||++||     ++.|++++
T Consensus       222 ~~~p~~~s~~~~~li~~lL~~dP~~R~g~~~~~~~ei~~h  261 (337)
T 1o6l_A          222 IRFPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEH  261 (337)
T ss_dssp             CCCCTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTS
T ss_pred             CCCCCCCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHHcC
Confidence            222333446688999999999999999     89998774

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A

Probab=100.00  E-value=3.1e-42  Score=374.72  Aligned_cols=261  Identities=24%  Similarity=0.402  Sum_probs=213.7

Q ss_pred             hCCCCcceEEeecCceEEEEEEEc-------CCCeEEEEEEeccCCc-hhHHHHHHHHHHhccC-CCCCcceeeeeeeec
Q 005257          363 TKGFSEENVIGVGGNGKVYKGVLE-------GGGAEIAVKRISHEND-GGTRAFLAEISSLGRL-KHKSLVGLRGWCKRE  433 (705)
Q Consensus       363 t~~f~~~~~LG~G~fg~Vy~~~~~-------~~~~~vavK~i~~~~~-~~~~~~~~Ei~~l~~l-~Hpniv~l~g~~~~~  433 (705)
                      .++|...+.||+|+||.||+|.+.       .++..||||+++.... ...+.+.+|+.+++++ +||||++++++|.. 
T Consensus        80 ~~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~-  158 (370)
T 2psq_A           80 RDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ-  158 (370)
T ss_dssp             GGGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECS-
T ss_pred             HHHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEcc-
Confidence            357888999999999999999874       2456899999976533 3457899999999999 89999999999876 


Q ss_pred             cCceEEEEeeCCCCChhHHHHhcCC-------------CCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeE
Q 005257          434 KGSLMLVYDYMENGSLDKWIFQCDG-------------SMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVL  500 (705)
Q Consensus       434 ~~~~~lV~E~~~~gsL~~~L~~~~~-------------~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NIL  500 (705)
                      .+.+++||||+++|+|.+++.....             ...+++.+++.++.||+.||.|||+   ++|+||||||+|||
T Consensus       159 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivHrDlkp~NIl  235 (370)
T 2psq_A          159 DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLAS---QKCIHRDLAARNVL  235 (370)
T ss_dssp             SSSCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEE
T ss_pred             CCCEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHh---CCeeccccchhhEE
Confidence            6789999999999999999986532             1358999999999999999999999   99999999999999


Q ss_pred             EccCCCeeeeeeccceecCCCCc-ceeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhh-CCCCCCCCCccHHH
Q 005257          501 LDKEMNGRLGDFGLARMHGHGQV-ASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLS-GRRPIEEGKPNLVE  578 (705)
Q Consensus       501 ld~~~~~kL~DFGla~~~~~~~~-~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~Ellt-G~~Pf~~~~~~~~~  578 (705)
                      ++.++.+||+|||+++....... .......+|+.|+|||++.+..++.++|||||||++|||++ |+.||.......  
T Consensus       236 l~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p~~~~~~~~--  313 (370)
T 2psq_A          236 VTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE--  313 (370)
T ss_dssp             ECTTCCEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGG--
T ss_pred             ECCCCCEEEccccCCcccCcccceecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCCCCCCHHH--
Confidence            99999999999999987654322 12223456889999999999899999999999999999999 999997654321  


Q ss_pred             HHHHHHHhCchhHHHHHhhhcCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHhccc
Q 005257          579 MVWELMVQGKLLDALDARLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLEGKIE  641 (705)
Q Consensus       579 ~v~~~~~~~~~~~~id~~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~  641 (705)
                       +...+..+.         .  ...+......+.+++..||+.||++||++.|+++.|+.++.
T Consensus       314 -~~~~~~~~~---------~--~~~~~~~~~~l~~li~~~l~~dP~~Rpt~~ell~~L~~il~  364 (370)
T 2psq_A          314 -LFKLLKEGH---------R--MDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILT  364 (370)
T ss_dssp             -HHHHHHTTC---------C--CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             -HHHHHhcCC---------C--CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence             111222221         1  22233445678899999999999999999999999997765

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*

Probab=100.00  E-value=2.9e-42  Score=375.83  Aligned_cols=260  Identities=27%  Similarity=0.415  Sum_probs=212.8

Q ss_pred             HhCCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCCc-hhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEEE
Q 005257          362 ATKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHEND-GGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLV  440 (705)
Q Consensus       362 at~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~-~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~lV  440 (705)
                      ..++|...+.||+|+||.||+|.+..+++.||||+++.... ...++|.+|++++++++||||++++++|.. ++..++|
T Consensus       112 ~~~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~~~lv  190 (377)
T 3cbl_A          112 NHEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQ-KQPIYIV  190 (377)
T ss_dssp             CGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECS-SSSCEEE
T ss_pred             chHHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEec-CCCcEEE
Confidence            34567889999999999999999998899999999875432 334578999999999999999999999876 6688999


Q ss_pred             EeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecCC
Q 005257          441 YDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGH  520 (705)
Q Consensus       441 ~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~~  520 (705)
                      |||+++|+|.+++.....  .+++.+++.++.|++.||+|||+   .+|+||||||+|||++.++.+||+|||+++....
T Consensus       191 ~e~~~~g~L~~~l~~~~~--~~~~~~~~~~~~qi~~~l~~LH~---~~ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~~~  265 (377)
T 3cbl_A          191 MELVQGGDFLTFLRTEGA--RLRVKTLLQMVGDAAAGMEYLES---KCCIHRDLAARNCLVTEKNVLKISDFGMSREEAD  265 (377)
T ss_dssp             EECCTTCBHHHHHHHHGG--GCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTCCEEECCGGGCEECTT
T ss_pred             EEcCCCCCHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHH---CCcCCcccCHHHEEEcCCCcEEECcCCCceecCC
Confidence            999999999999976432  58999999999999999999999   9999999999999999999999999999986543


Q ss_pred             CCccee-eeeeccccCCCccccccCCCCccccEEEEehhHHHHhh-CCCCCCCCCccHHHHHHHHHHhCchhHHHHHhhh
Q 005257          521 GQVAST-TRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLS-GRRPIEEGKPNLVEMVWELMVQGKLLDALDARLR  598 (705)
Q Consensus       521 ~~~~~~-~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~Ellt-G~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~l~  598 (705)
                      ...... ....+++.|+|||++.++.++.++|||||||++|||++ |+.||......   .+.+.+..+.         +
T Consensus       266 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~~~---~~~~~~~~~~---------~  333 (377)
T 3cbl_A          266 GVYAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQ---QTREFVEKGG---------R  333 (377)
T ss_dssp             SEEECCSSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSCHH---HHHHHHHTTC---------C
T ss_pred             CceeecCCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH---HHHHHHHcCC---------C
Confidence            321111 11245788999999998889999999999999999998 99999765432   1222222221         1


Q ss_pred             cCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHhccc
Q 005257          599 AKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLEGKIE  641 (705)
Q Consensus       599 ~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~  641 (705)
                        ...+..++..+.+++..||+.||++|||+.++++.|+....
T Consensus       334 --~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i~~  374 (377)
T 3cbl_A          334 --LPCPELCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQSIRK  374 (377)
T ss_dssp             --CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             --CCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHh
Confidence              12233345678899999999999999999999999986543

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...

Probab=100.00  E-value=4.7e-42  Score=360.52  Aligned_cols=268  Identities=21%  Similarity=0.383  Sum_probs=210.9

Q ss_pred             hCCCCcceEEeecCceEEEEEE----EcCCCeEEEEEEeccCCchhHHHHHHHHHHhccCCCCCcceeeeeeeec-cCce
Q 005257          363 TKGFSEENVIGVGGNGKVYKGV----LEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKRE-KGSL  437 (705)
Q Consensus       363 t~~f~~~~~LG~G~fg~Vy~~~----~~~~~~~vavK~i~~~~~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~-~~~~  437 (705)
                      .++|+..+.||+|+||+||+|.    ...+++.||||++........+.+.+|++++++++||||++++++|... ...+
T Consensus         9 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~   88 (295)
T 3ugc_A            9 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNL   88 (295)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHHTSC
T ss_pred             HHHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCce
Confidence            3568889999999999999998    4567899999999877767778899999999999999999999988643 3568


Q ss_pred             EEEEeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeecccee
Q 005257          438 MLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARM  517 (705)
Q Consensus       438 ~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~  517 (705)
                      ++||||+++|+|.+++.....  .+++.+++.++.|++.||.|||+   .+|+||||||+|||++.++.+||+|||+++.
T Consensus        89 ~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~Dikp~Nil~~~~~~~kl~Dfg~~~~  163 (295)
T 3ugc_A           89 KLIMEYLPYGSLRDYLQKHKE--RIDHIKLLQYTSQICKGMEYLGT---KRYIHRDLATRNILVENENRVKIGDFGLTKV  163 (295)
T ss_dssp             EEEEECCTTCBHHHHHHHCGG--GCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEEEETTEEEECCCCSCC-
T ss_pred             EEEEEeCCCCCHHHHHHhccc--ccCHHHHHHHHHHHHHHHHHHhc---CCcccCCCCHhhEEEcCCCeEEEccCccccc
Confidence            999999999999999976532  58999999999999999999998   9999999999999999999999999999987


Q ss_pred             cCCCCcc--eeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCc-------
Q 005257          518 HGHGQVA--STTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGK-------  588 (705)
Q Consensus       518 ~~~~~~~--~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~-------  588 (705)
                      .......  ......++..|+|||++.+..++.++|||||||++|||++|..|+......    .........       
T Consensus       164 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~----~~~~~~~~~~~~~~~~  239 (295)
T 3ugc_A          164 LPQDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAE----FMRMIGNDKQGQMIVF  239 (295)
T ss_dssp             ------------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCSHHHH----HHHHHCTTCCTHHHHH
T ss_pred             ccCCcceeeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCCChHH----HHhhhcCccccchhHH
Confidence            6543221  122235678899999999999999999999999999999999998642211    111111111       


Q ss_pred             -hhHHHHHhhhcCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHhccc
Q 005257          589 -LLDALDARLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLEGKIE  641 (705)
Q Consensus       589 -~~~~id~~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~  641 (705)
                       ..+.+.....  ...+......+.+++..||+.||++|||+.|+++.|+...+
T Consensus       240 ~~~~~~~~~~~--~~~~~~~~~~l~~li~~~l~~dp~~Rps~~el~~~L~~l~~  291 (295)
T 3ugc_A          240 HLIELLKNNGR--LPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRD  291 (295)
T ss_dssp             HHHHHHHTTCC--CCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             HHHHHHhccCc--CCCCcCcCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHH
Confidence             1111111111  22334455778999999999999999999999999987655

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...

Probab=100.00  E-value=4.2e-42  Score=374.07  Aligned_cols=259  Identities=29%  Similarity=0.488  Sum_probs=201.6

Q ss_pred             hCCCCcceEEeecCceEEEEEEEc---CCCeEEEEEEeccCC-chhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceE
Q 005257          363 TKGFSEENVIGVGGNGKVYKGVLE---GGGAEIAVKRISHEN-DGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLM  438 (705)
Q Consensus       363 t~~f~~~~~LG~G~fg~Vy~~~~~---~~~~~vavK~i~~~~-~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~  438 (705)
                      .++|...+.||+|+||.||+|.+.   .++..||||+++... ....+.|.+|+.++++++||||++++++|.. .+..+
T Consensus        44 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~-~~~~~  122 (373)
T 2qol_A           44 ATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTK-SKPVM  122 (373)
T ss_dssp             GGGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSSCE
T ss_pred             HhhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEee-CCceE
Confidence            357899999999999999999986   456789999997653 3456789999999999999999999999876 67889


Q ss_pred             EEEeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceec
Q 005257          439 LVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMH  518 (705)
Q Consensus       439 lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~  518 (705)
                      +||||+++|+|.+++.+...  .+++.+++.++.|++.||.|||+   .+|+||||||+|||++.++.+||+|||+++..
T Consensus       123 lv~e~~~~~sL~~~l~~~~~--~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~  197 (373)
T 2qol_A          123 IVTEYMENGSLDSFLRKHDA--QFTVIQLVGMLRGIASGMKYLSD---MGYVHRDLAARNILINSNLVCKVSDFGLGRVL  197 (373)
T ss_dssp             EEEECCTTCBHHHHHHTTTT--CSCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTCCEEECCC------
T ss_pred             EEEeCCCCCcHHHHHHhCCC--CCCHHHHHHHHHHHHHHHHHHHH---CCeeCCCCCcceEEEcCCCCEEECcCcccccc
Confidence            99999999999999976432  68999999999999999999998   99999999999999999999999999999876


Q ss_pred             CCCCcce--eeeeeccccCCCccccccCCCCccccEEEEehhHHHHhh-CCCCCCCCCccHHHHHHHHHHhCchhHHHHH
Q 005257          519 GHGQVAS--TTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLS-GRRPIEEGKPNLVEMVWELMVQGKLLDALDA  595 (705)
Q Consensus       519 ~~~~~~~--~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~Ellt-G~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~  595 (705)
                      .......  .....+++.|+|||++.+..++.++|||||||++|||++ |+.||......   .+...         +..
T Consensus       198 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~~~---~~~~~---------i~~  265 (373)
T 2qol_A          198 EDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQ---DVIKA---------VDE  265 (373)
T ss_dssp             ----------------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTCCHH---HHHHH---------HHT
T ss_pred             ccCCccceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCCCHH---HHHHH---------HHc
Confidence            5432221  122345778999999999999999999999999999998 99999765421   11111         222


Q ss_pred             hhhcCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHhccc
Q 005257          596 RLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLEGKIE  641 (705)
Q Consensus       596 ~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~  641 (705)
                      ...  ...+......+.+++..||+.||++||++.++++.|+..+.
T Consensus       266 ~~~--~~~~~~~~~~l~~li~~cl~~dp~~RPs~~~i~~~L~~~~~  309 (373)
T 2qol_A          266 GYR--LPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIR  309 (373)
T ss_dssp             TEE--CCCCTTCBHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             CCC--CCCCccccHHHHHHHHHHhCcChhhCcCHHHHHHHHHHHHh
Confidence            211  22233455678999999999999999999999999998765

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*

Probab=100.00  E-value=2.2e-42  Score=383.17  Aligned_cols=266  Identities=23%  Similarity=0.269  Sum_probs=215.0

Q ss_pred             cCHHHHHHHhCCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCC---chhHHHHHHHHHHhccCCCCCcceeeeee
Q 005257          354 ITYQEIEAATKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHEN---DGGTRAFLAEISSLGRLKHKSLVGLRGWC  430 (705)
Q Consensus       354 ~~~~el~~at~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~---~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~  430 (705)
                      ..++++...+++|+..++||+|+||+||+|.++.+++.||||+++...   ....+.+.+|+.++..++||||++++++|
T Consensus        64 ~~~~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~  143 (437)
T 4aw2_A           64 SKVKQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAF  143 (437)
T ss_dssp             HHHHHHSCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEE
T ss_pred             chhhcccCChhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEE
Confidence            456677778899999999999999999999999999999999986531   22234488999999999999999999988


Q ss_pred             eeccCceEEEEeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeee
Q 005257          431 KREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLG  510 (705)
Q Consensus       431 ~~~~~~~~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~  510 (705)
                      .+ .+.+++||||+++|+|.+++.+...  .+++..+..++.||+.||.|||+   .+|+||||||+|||++.++.+||+
T Consensus       144 ~~-~~~~~lV~Ey~~gg~L~~~l~~~~~--~l~e~~~~~~~~qi~~aL~~LH~---~giiHrDLKp~NILl~~~g~vkL~  217 (437)
T 4aw2_A          144 QD-DNNLYLVMDYYVGGDLLTLLSKFED--RLPEEMARFYLAEMVIAIDSVHQ---LHYVHRDIKPDNILMDMNGHIRLA  217 (437)
T ss_dssp             EC-SSEEEEEECCCTTCBHHHHHHTTTT--CCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEEC
T ss_pred             ee-CCEEEEEEecCCCCcHHHHHHHccC--CCCHHHHHHHHHHHHHHHHHHHh---CCeEecccCHHHeeEcCCCCEEEc
Confidence            76 6789999999999999999976432  69999999999999999999998   999999999999999999999999


Q ss_pred             eeccceecCCCCcceeeeeeccccCCCccccc-----cCCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHH
Q 005257          511 DFGLARMHGHGQVASTTRVVGTVGYLAPEVFS-----SGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMV  585 (705)
Q Consensus       511 DFGla~~~~~~~~~~~~~~~gt~~y~APE~~~-----~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~  585 (705)
                      |||+++.............+||+.|+|||++.     ...++.++|||||||++|||++|+.||......  +.. ..+.
T Consensus       218 DFGla~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~--~~~-~~i~  294 (437)
T 4aw2_A          218 DFGSCLKLMEDGTVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLV--ETY-GKIM  294 (437)
T ss_dssp             CCTTCEECCTTSCEECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCSSHH--HHH-HHHH
T ss_pred             chhhhhhcccCCCcccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCCChh--HHH-Hhhh
Confidence            99999877655544444568999999999986     456899999999999999999999999865421  111 1111


Q ss_pred             hCchhHHHHHhhhcCCCCCHHHHHHHHHHHHHcCCCCCCC--CCCHHHHHHH
Q 005257          586 QGKLLDALDARLRAKGGFDEDEVERVLHLGLLCAYPDPRA--RPTMRQVVKV  635 (705)
Q Consensus       586 ~~~~~~~id~~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~--RPs~~evl~~  635 (705)
                      ..      ..++.. ..........+.+++..|+..+|++  ||++.|++++
T Consensus       295 ~~------~~~~~~-p~~~~~~s~~~~dLi~~lL~~~~~r~~r~~~~eil~H  339 (437)
T 4aw2_A          295 NH------KERFQF-PTQVTDVSENAKDLIRRLICSREHRLGQNGIEDFKKH  339 (437)
T ss_dssp             TH------HHHCCC-CSSCCCSCHHHHHHHHTTSSCGGGCTTTTTTHHHHTS
T ss_pred             hc------cccccC-CcccccCCHHHHHHHHHHhcccccccCCCCHHHHhCC
Confidence            10      001110 1111123456788899999888888  9999999874

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A

Probab=100.00  E-value=3.8e-42  Score=388.24  Aligned_cols=259  Identities=24%  Similarity=0.447  Sum_probs=216.3

Q ss_pred             hCCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCCchhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEEEEe
Q 005257          363 TKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYD  442 (705)
Q Consensus       363 t~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~lV~E  442 (705)
                      .++|...+.||+|+||.||+|.+..++..||||+++... ...++|.+|+.+|++++||||++++++|.. ...+++|||
T Consensus       219 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~l~~~~~~-~~~~~lv~E  296 (495)
T 1opk_A          219 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTR-EPPFYIITE  296 (495)
T ss_dssp             GGGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSSCEEEEE
T ss_pred             HHHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCcc-cchHHHHHHHHHHHhcCCCCEeeEEEEEec-CCcEEEEEE
Confidence            456778899999999999999999889999999996543 346789999999999999999999999976 668899999


Q ss_pred             eCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecCCCC
Q 005257          443 YMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQ  522 (705)
Q Consensus       443 ~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~~~~  522 (705)
                      |+++|+|.+++...... .+++..++.++.||+.||.|||+   ++|+||||||+|||++.++.+||+|||+++......
T Consensus       297 ~~~~g~L~~~l~~~~~~-~~~~~~~~~i~~qi~~~L~~LH~---~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~  372 (495)
T 1opk_A          297 FMTYGNLLDYLRECNRQ-EVSAVVLLYMATQISSAMEYLEK---KNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDT  372 (495)
T ss_dssp             CCTTCBHHHHHHHSCTT-TSCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECGGGCEEECCTTCEECCTTCC
T ss_pred             ccCCCCHHHHHHhcCcC-CCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCChhhEEECCCCcEEEeecccceeccCCc
Confidence            99999999999875433 68999999999999999999999   999999999999999999999999999998765443


Q ss_pred             cceeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhh-CCCCCCCCCccHHHHHHHHHHhCchhHHHHHhhhcCC
Q 005257          523 VASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLS-GRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRAKG  601 (705)
Q Consensus       523 ~~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~Ellt-G~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~l~~~~  601 (705)
                      ........+++.|+|||++....++.++|||||||++|||++ |+.||.......   +.+.+         ....+  .
T Consensus       373 ~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~~~~---~~~~~---------~~~~~--~  438 (495)
T 1opk_A          373 YTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ---VYELL---------EKDYR--M  438 (495)
T ss_dssp             EECCTTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGGG---HHHHH---------HTTCC--C
T ss_pred             eeecCCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCCHHH---HHHHH---------HcCCC--C
Confidence            322233456789999999998899999999999999999999 999997654321   11112         11111  1


Q ss_pred             CCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHhccc
Q 005257          602 GFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLEGKIE  641 (705)
Q Consensus       602 ~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~  641 (705)
                      ..+..+...+.+++..||+.||++|||+.++++.|+...+
T Consensus       439 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~el~~~L~~~~~  478 (495)
T 1opk_A          439 ERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQ  478 (495)
T ss_dssp             CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSCS
T ss_pred             CCCCCCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHHh
Confidence            2233445678899999999999999999999999997754

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}

Probab=100.00  E-value=4.7e-41  Score=357.24  Aligned_cols=271  Identities=20%  Similarity=0.288  Sum_probs=216.6

Q ss_pred             CCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCC-chhHHHHHHHHHHhccCCCCCcceeeeeeeecc-CceEEEE
Q 005257          364 KGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHEN-DGGTRAFLAEISSLGRLKHKSLVGLRGWCKREK-GSLMLVY  441 (705)
Q Consensus       364 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~-~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~-~~~~lV~  441 (705)
                      ++|...++||+|+||+||+|.+..+++.||||++.... ....+.+.+|++++++++||||+++++++.... ...++||
T Consensus         9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~   88 (319)
T 4euu_A            9 HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIM   88 (319)
T ss_dssp             EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEE
T ss_pred             CCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEEEEE
Confidence            56888999999999999999999999999999997543 234577889999999999999999999887533 3679999


Q ss_pred             eeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEE----ccCCCeeeeeecccee
Q 005257          442 DYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLL----DKEMNGRLGDFGLARM  517 (705)
Q Consensus       442 E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILl----d~~~~~kL~DFGla~~  517 (705)
                      ||+++++|.+++........+++.+++.++.|++.||.|||+   .+|+||||||+|||+    +.++.+||+|||+++.
T Consensus        89 e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a~~  165 (319)
T 4euu_A           89 EFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRE---NGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARE  165 (319)
T ss_dssp             ECCTTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEEECTTSCEEEEECCCTTCEE
T ss_pred             eCCCCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHH---CCEecCCCCHHHEEEeccCCCCceEEEccCCCcee
Confidence            999999999999875544459999999999999999999999   999999999999999    7888899999999987


Q ss_pred             cCCCCcceeeeeeccccCCCccccc--------cCCCCccccEEEEehhHHHHhhCCCCCCCCCc--cHHHHHHHHHHhC
Q 005257          518 HGHGQVASTTRVVGTVGYLAPEVFS--------SGRASTQTDVFGFGILILEVLSGRRPIEEGKP--NLVEMVWELMVQG  587 (705)
Q Consensus       518 ~~~~~~~~~~~~~gt~~y~APE~~~--------~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~--~~~~~v~~~~~~~  587 (705)
                      ......  .....||+.|+|||++.        +..++.++|||||||++|||++|+.||.....  ...+.+.. +..+
T Consensus       166 ~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~-~~~~  242 (319)
T 4euu_A          166 LEDDEQ--FVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYK-IITG  242 (319)
T ss_dssp             CCTTCC--BCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGGGCHHHHHH-HHHH
T ss_pred             cCCCCc--eeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccchhHHHHHH-HhcC
Confidence            755432  23357999999999986        46789999999999999999999999974322  11122222 2111


Q ss_pred             chhHHH-------------HHhhhcCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHhcc
Q 005257          588 KLLDAL-------------DARLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLEGKI  640 (705)
Q Consensus       588 ~~~~~i-------------d~~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~  640 (705)
                      .....+             ...+.............+.+++..||+.||++|||++|+++...+..
T Consensus       243 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~~d~~  308 (319)
T 4euu_A          243 KPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDIL  308 (319)
T ss_dssp             CCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHT
T ss_pred             CCcccchhhhcccCCccccCccCCcccccchhHHHHhHHHHHHhccCChhhhccHHHhhhccHHHh
Confidence            110000             00111112445677888999999999999999999999999988654

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*

Probab=100.00  E-value=7.1e-41  Score=362.55  Aligned_cols=249  Identities=24%  Similarity=0.332  Sum_probs=208.4

Q ss_pred             hCCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCCch------hHHHHHHHHHHhccCCCCCcceeeeeeeeccCc
Q 005257          363 TKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDG------GTRAFLAEISSLGRLKHKSLVGLRGWCKREKGS  436 (705)
Q Consensus       363 t~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~~------~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~  436 (705)
                      .++|...+.||+|+||.||+|.+..+++.||+|+++.....      ..+.+.+|+.++..++||||+++++++.. ...
T Consensus        11 ~~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~-~~~   89 (361)
T 2yab_A           11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYEN-RTD   89 (361)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEEC-SSE
T ss_pred             hhceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEe-CCE
Confidence            46788999999999999999999999999999999765322      35779999999999999999999999876 678


Q ss_pred             eEEEEeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCC----Ceeeeee
Q 005257          437 LMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEM----NGRLGDF  512 (705)
Q Consensus       437 ~~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~----~~kL~DF  512 (705)
                      +++||||+++|+|.+++...   ..+++.++..++.||+.||.|||+   .+|+||||||+|||++.++    .+||+||
T Consensus        90 ~~lv~e~~~gg~L~~~l~~~---~~l~~~~~~~i~~qi~~aL~~LH~---~givHrDlkp~NIll~~~~~~~~~vkl~DF  163 (361)
T 2yab_A           90 VVLILELVSGGELFDFLAQK---ESLSEEEATSFIKQILDGVNYLHT---KKIAHFDLKPENIMLLDKNIPIPHIKLIDF  163 (361)
T ss_dssp             EEEEEECCCSCBHHHHHTTC---SCCBHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEESCTTSSSCCEEECCC
T ss_pred             EEEEEEcCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEEeCCCCCccCEEEEec
Confidence            99999999999999999643   269999999999999999999999   9999999999999998876    7999999


Q ss_pred             ccceecCCCCcceeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhHH
Q 005257          513 GLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDA  592 (705)
Q Consensus       513 Gla~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~~  592 (705)
                      |+++.......  .....||+.|+|||++.+..++.++|||||||++|||++|+.||......   .....+..+.    
T Consensus       164 G~a~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~~~~---~~~~~i~~~~----  234 (361)
T 2yab_A          164 GLAHEIEDGVE--FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQ---ETLANITAVS----  234 (361)
T ss_dssp             SSCEECCTTCC--CCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHH---HHHHHHHTTC----
T ss_pred             CCceEcCCCCc--cccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHH---HHHHHHHhcC----
Confidence            99987655332  23457999999999999889999999999999999999999999765421   1122222221    


Q ss_pred             HHHhhhcCCCCCHH----HHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 005257          593 LDARLRAKGGFDED----EVERVLHLGLLCAYPDPRARPTMRQVVKV  635 (705)
Q Consensus       593 id~~l~~~~~~~~~----~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  635 (705)
                              ..++..    ....+.+++..||..||++|||+.|++++
T Consensus       235 --------~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~h  273 (361)
T 2yab_A          235 --------YDFDEEFFSQTSELAKDFIRKLLVKETRKRLTIQEALRH  273 (361)
T ss_dssp             --------CCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred             --------CCCCchhccCCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence                    112211    23567899999999999999999999874

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}

Probab=100.00  E-value=2.1e-41  Score=359.08  Aligned_cols=246  Identities=26%  Similarity=0.361  Sum_probs=198.2

Q ss_pred             CCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCCc--hhHHHHHHHHHHhccC-CCCCcceeeeeeeeccCceEEE
Q 005257          364 KGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHEND--GGTRAFLAEISSLGRL-KHKSLVGLRGWCKREKGSLMLV  440 (705)
Q Consensus       364 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~--~~~~~~~~Ei~~l~~l-~Hpniv~l~g~~~~~~~~~~lV  440 (705)
                      ++|+..++||+|+||+||+|.+..+++.||||++.....  .....+..|+..+.++ +||||++++++|.. ++.+++|
T Consensus        57 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~-~~~~~lv  135 (311)
T 3p1a_A           57 QSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEE-GGILYLQ  135 (311)
T ss_dssp             HHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEE-TTEEEEE
T ss_pred             hheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEe-CCEEEEE
Confidence            578999999999999999999998999999999865432  3344566677666665 89999999999876 7789999


Q ss_pred             EeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecCC
Q 005257          441 YDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGH  520 (705)
Q Consensus       441 ~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~~  520 (705)
                      |||+ +++|.+++.....  .+++.+++.++.|++.||.|||+   .+|+||||||+|||++.++++||+|||+++....
T Consensus       136 ~e~~-~~~L~~~~~~~~~--~l~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dikp~NIll~~~~~~kl~DFG~a~~~~~  209 (311)
T 3p1a_A          136 TELC-GPSLQQHCEAWGA--SLPEAQVWGYLRDTLLALAHLHS---QGLVHLDVKPANIFLGPRGRCKLGDFGLLVELGT  209 (311)
T ss_dssp             EECC-CCBHHHHHHHHCS--CCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECGGGCEEECCCTTCEECC-
T ss_pred             Eecc-CCCHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHH---CCEecCCCCHHHEEECCCCCEEEccceeeeeccc
Confidence            9999 6799999876543  69999999999999999999998   8999999999999999999999999999987654


Q ss_pred             CCcceeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhHHHHHhhhcC
Q 005257          521 GQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRAK  600 (705)
Q Consensus       521 ~~~~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~l~~~  600 (705)
                      ..  ......||+.|+|||++.+ .++.++|||||||++|||++|..|+....      .+..+..+.....+.      
T Consensus       210 ~~--~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~~~~~~~------~~~~~~~~~~~~~~~------  274 (311)
T 3p1a_A          210 AG--AGEVQEGDPRYMAPELLQG-SYGTAADVFSLGLTILEVACNMELPHGGE------GWQQLRQGYLPPEFT------  274 (311)
T ss_dssp             -------CCCCCGGGCCGGGGGT-CCSTHHHHHHHHHHHHHHHHTCCCCSSHH------HHHHHTTTCCCHHHH------
T ss_pred             CC--CCcccCCCccccCHhHhcC-CCCchhhHHHHHHHHHHHHhCCCCCCCcc------HHHHHhccCCCcccc------
Confidence            32  2233569999999999875 79999999999999999999987765421      123333333222111      


Q ss_pred             CCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 005257          601 GGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKV  635 (705)
Q Consensus       601 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  635 (705)
                      .    .....+.+++..||+.||++|||+.|++++
T Consensus       275 ~----~~~~~l~~li~~~L~~dP~~Rpt~~ell~h  305 (311)
T 3p1a_A          275 A----GLSSELRSVLVMMLEPDPKLRATAEALLAL  305 (311)
T ss_dssp             T----TSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred             c----CCCHHHHHHHHHHcCCChhhCcCHHHHHhC
Confidence            1    123568899999999999999999999873

>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=100.00  E-value=7.8e-42  Score=353.94  Aligned_cols=256  Identities=29%  Similarity=0.456  Sum_probs=211.1

Q ss_pred             CCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCCchhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEEEEee
Q 005257          364 KGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDY  443 (705)
Q Consensus       364 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~lV~E~  443 (705)
                      ++|...+.||+|+||.||+|.+.. ++.||+|++.... ...+++.+|++++++++||||+++++++.. .+..++||||
T Consensus        10 ~~y~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~lv~e~   86 (269)
T 4hcu_A           10 SELTFVQEIGSGQFGLVHLGYWLN-KDKVAIKTIREGA-MSEEDFIEEAEVMMKLSHPKLVQLYGVCLE-QAPICLVFEF   86 (269)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETT-TEEEEEEEECTTS-BCHHHHHHHHHHHHTCCCTTBCCEEEEECS-SSSEEEEEEC
T ss_pred             hhceeeheecCCCccEEEEEEecC-CCeEEEEEecccc-cCHHHHHHHHHHHHhCCCCCEeeEEEEEec-CCceEEEEEe
Confidence            567888999999999999999874 6789999997543 345679999999999999999999999876 6689999999


Q ss_pred             CCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecCCCCc
Q 005257          444 MENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQV  523 (705)
Q Consensus       444 ~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~~~~~  523 (705)
                      +++++|.+++.....  .+++..++.++.|++.||.|||+   .+|+||||||+||+++.++.+||+|||+++.......
T Consensus        87 ~~~~~L~~~l~~~~~--~~~~~~~~~i~~~i~~~l~~lH~---~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~  161 (269)
T 4hcu_A           87 MEHGCLSDYLRTQRG--LFAAETLLGMCLDVCEGMAYLEE---ACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQY  161 (269)
T ss_dssp             CTTCBHHHHHHTTTT--CCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECGGGCEEECCTTGGGGBCCHHH
T ss_pred             CCCCcHHHHHHhcCc--ccCHHHHHHHHHHHHHHHHHHHh---CCeecCCcchheEEEcCCCCEEecccccccccccccc
Confidence            999999999975433  68999999999999999999998   9999999999999999999999999999986654332


Q ss_pred             ceeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhh-CCCCCCCCCccHHHHHHHHHHhCchhHHHHHhhhcCCC
Q 005257          524 ASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLS-GRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRAKGG  602 (705)
Q Consensus       524 ~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~Ellt-G~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~l~~~~~  602 (705)
                      .......+|+.|+|||++.+..++.++|||||||++|||++ |+.||......   .....+..+         ..  ..
T Consensus       162 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~~~---~~~~~~~~~---------~~--~~  227 (269)
T 4hcu_A          162 TSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNS---EVVEDISTG---------FR--LY  227 (269)
T ss_dssp             HSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH---HHHHHHHTT---------CC--CC
T ss_pred             ccccCcccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCHH---HHHHHHhcC---------cc--CC
Confidence            23333456788999999998899999999999999999999 99999765431   111112111         11  11


Q ss_pred             CCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHhccc
Q 005257          603 FDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLEGKIE  641 (705)
Q Consensus       603 ~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~  641 (705)
                      .+......+.+++..||+.||++||++.++++.|+...+
T Consensus       228 ~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~l~~  266 (269)
T 4hcu_A          228 KPRLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAE  266 (269)
T ss_dssp             CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             CCCcCCHHHHHHHHHHccCCcccCcCHHHHHHHHHHHHH
Confidence            222334668899999999999999999999999997765

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=5.5e-41  Score=357.64  Aligned_cols=249  Identities=20%  Similarity=0.290  Sum_probs=209.2

Q ss_pred             hCCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCCchhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEEEEe
Q 005257          363 TKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYD  442 (705)
Q Consensus       363 t~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~lV~E  442 (705)
                      .++|...+.||+|+||.||+|.+..+++.+|+|.+... ......+.+|+.+++.++||||+++++++.. .+.+++|||
T Consensus         4 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~-~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~-~~~~~lv~e   81 (321)
T 1tki_A            4 YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVK-GTDQVLVKKEISILNIARHRNILHLHESFES-MEELVMIFE   81 (321)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCC-THHHHHHHHHHHHHHHSCCTTBCCEEEEEEE-TTEEEEEEC
T ss_pred             hhceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecC-cccHHHHHHHHHHHHhCCCCCCCeEeEEEec-CCEEEEEEE
Confidence            46788999999999999999999999999999998644 3445678899999999999999999999876 678999999


Q ss_pred             eCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEcc--CCCeeeeeeccceecCC
Q 005257          443 YMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDK--EMNGRLGDFGLARMHGH  520 (705)
Q Consensus       443 ~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~--~~~~kL~DFGla~~~~~  520 (705)
                      |+++|+|.+++....  ..+++.++..++.|++.||.|||+   .+|+||||||+|||++.  ++.+||+|||+++....
T Consensus        82 ~~~g~~L~~~l~~~~--~~~~~~~~~~i~~qi~~al~~lH~---~givH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~~~  156 (321)
T 1tki_A           82 FISGLDIFERINTSA--FELNEREIVSYVHQVCEALQFLHS---HNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKP  156 (321)
T ss_dssp             CCCCCBHHHHHTSSS--CCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEESSSSCCCEEECCCTTCEECCT
T ss_pred             eCCCCCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHH---CCCCcCCCCHHHEEEccCCCCCEEEEECCCCeECCC
Confidence            999999999996533  268999999999999999999999   99999999999999987  78999999999988755


Q ss_pred             CCcceeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhHHHHHhhhcC
Q 005257          521 GQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRAK  600 (705)
Q Consensus       521 ~~~~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~l~~~  600 (705)
                      ..  ......||+.|+|||++.+..++.++|||||||++|||++|+.||......   .....+..+..           
T Consensus       157 ~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~---~~~~~i~~~~~-----------  220 (321)
T 1tki_A          157 GD--NFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQ---QIIENIMNAEY-----------  220 (321)
T ss_dssp             TC--EEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHH---HHHHHHHHTCC-----------
T ss_pred             CC--ccccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCCCHH---HHHHHHHcCCC-----------
Confidence            43  234468999999999999888899999999999999999999999765421   12222222211           


Q ss_pred             CCCCH----HHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 005257          601 GGFDE----DEVERVLHLGLLCAYPDPRARPTMRQVVKV  635 (705)
Q Consensus       601 ~~~~~----~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  635 (705)
                       .++.    .....+.+++..||+.||.+|||+.|++++
T Consensus       221 -~~~~~~~~~~s~~~~~li~~~L~~dp~~Rpt~~e~l~h  258 (321)
T 1tki_A          221 -TFDEEAFKEISIEAMDFVDRLLVKERKSRMTASEALQH  258 (321)
T ss_dssp             -CCCHHHHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred             -CCChhhhccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence             1111    123568899999999999999999999984

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7

Probab=100.00  E-value=1.1e-41  Score=365.04  Aligned_cols=263  Identities=25%  Similarity=0.426  Sum_probs=215.3

Q ss_pred             HHhCCCCcceEEeecCceEEEEEEEcC-----CCeEEEEEEeccCCc-hhHHHHHHHHHHhccCCCCCcceeeeeeeecc
Q 005257          361 AATKGFSEENVIGVGGNGKVYKGVLEG-----GGAEIAVKRISHEND-GGTRAFLAEISSLGRLKHKSLVGLRGWCKREK  434 (705)
Q Consensus       361 ~at~~f~~~~~LG~G~fg~Vy~~~~~~-----~~~~vavK~i~~~~~-~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~  434 (705)
                      ...++|...+.||+|+||.||+|.+..     +++.||||+++.... ...+.+.+|+.++++++||||++++++|.. .
T Consensus        44 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~  122 (343)
T 1luf_A           44 YPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAV-G  122 (343)
T ss_dssp             CCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECS-S
T ss_pred             ecHHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcc-C
Confidence            345788999999999999999999973     458999999976543 345679999999999999999999999876 6


Q ss_pred             CceEEEEeeCCCCChhHHHHhcCC---------------------CCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecC
Q 005257          435 GSLMLVYDYMENGSLDKWIFQCDG---------------------SMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRD  493 (705)
Q Consensus       435 ~~~~lV~E~~~~gsL~~~L~~~~~---------------------~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrD  493 (705)
                      +..++||||+++|+|.+++.....                     ...+++.+++.++.||+.||.|||+   ++|+|||
T Consensus       123 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~---~~ivH~D  199 (343)
T 1luf_A          123 KPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSE---RKFVHRD  199 (343)
T ss_dssp             SSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSC
T ss_pred             CceEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHh---CCeecCC
Confidence            788999999999999999986431                     1368999999999999999999999   9999999


Q ss_pred             CCCCCeEEccCCCeeeeeeccceecCCCCc-ceeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhh-CCCCCCC
Q 005257          494 IKSSNVLLDKEMNGRLGDFGLARMHGHGQV-ASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLS-GRRPIEE  571 (705)
Q Consensus       494 Lkp~NILld~~~~~kL~DFGla~~~~~~~~-~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~Ellt-G~~Pf~~  571 (705)
                      |||+|||++.++.+||+|||+++....... .......||+.|+|||++.+..++.++|||||||++|||++ |+.||..
T Consensus       200 lkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~  279 (343)
T 1luf_A          200 LATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYG  279 (343)
T ss_dssp             CSGGGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTT
T ss_pred             CCcceEEECCCCeEEEeecCCCcccccCccccccCCCcccceecChhhhccCCcCcccccHHHHHHHHHHHhcCCCcCCC
Confidence            999999999999999999999976543221 22233567899999999998899999999999999999999 9999976


Q ss_pred             CCccHHHHHHHHHHhCchhHHHHHhhhcCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHhccc
Q 005257          572 GKPNLVEMVWELMVQGKLLDALDARLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLEGKIE  641 (705)
Q Consensus       572 ~~~~~~~~v~~~~~~~~~~~~id~~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~  641 (705)
                      ...   ..+...+..+..           ...+......+.+++..||+.||++||++.++++.|+...+
T Consensus       280 ~~~---~~~~~~~~~~~~-----------~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~~~~~L~~~~~  335 (343)
T 1luf_A          280 MAH---EEVIYYVRDGNI-----------LACPENCPLELYNLMRLCWSKLPADRPSFCSIHRILQRMCE  335 (343)
T ss_dssp             SCH---HHHHHHHHTTCC-----------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC
T ss_pred             CCh---HHHHHHHhCCCc-----------CCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHHHHHHh
Confidence            542   122222222221           11223344678899999999999999999999999997765

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...

Probab=100.00  E-value=4.9e-42  Score=358.70  Aligned_cols=262  Identities=24%  Similarity=0.442  Sum_probs=220.0

Q ss_pred             HHHhCCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCCchhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEE
Q 005257          360 EAATKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLML  439 (705)
Q Consensus       360 ~~at~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~l  439 (705)
                      +...++|...+.||+|+||.||+|.+..++..||+|++... ....+.+.+|++++++++||||+++++++.. .+..++
T Consensus         9 ~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~~   86 (288)
T 3kfa_A            9 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR-EPPFYI   86 (288)
T ss_dssp             BCCGGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSC-STHHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSSEEE
T ss_pred             cccccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcC-HHHHHHHHHHHHHHHhCCCCCEeeEEEEEcc-CCCEEE
Confidence            34466788899999999999999999998999999998653 3456789999999999999999999999876 678899


Q ss_pred             EEeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecC
Q 005257          440 VYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHG  519 (705)
Q Consensus       440 V~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~  519 (705)
                      ||||+++++|.+++...... .+++..++.++.|++.||.|||+   .+|+||||||+||+++.++.+||+|||+++...
T Consensus        87 v~e~~~~~~L~~~~~~~~~~-~~~~~~~~~i~~~i~~~l~~lH~---~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~  162 (288)
T 3kfa_A           87 ITEFMTYGNLLDYLRECNRQ-EVSAVVLLYMATQISSAMEYLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRLMT  162 (288)
T ss_dssp             EEECCTTEEHHHHHHHCCTT-TSCHHHHHHHHHHHHHHHHHHHH---HTCCCSCCSGGGEEECGGGCEEECCCCGGGTSC
T ss_pred             EEEcCCCCcHHHHHHhcccC-CccHhHHHHHHHHHHHHHHHHHH---CCccCCCCCcceEEEcCCCCEEEccCccceecc
Confidence            99999999999999875433 69999999999999999999998   999999999999999999999999999998776


Q ss_pred             CCCcceeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhh-CCCCCCCCCccHHHHHHHHHHhCchhHHHHHhhh
Q 005257          520 HGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLS-GRRPIEEGKPNLVEMVWELMVQGKLLDALDARLR  598 (705)
Q Consensus       520 ~~~~~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~Ellt-G~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~l~  598 (705)
                      ...........+|+.|+|||++.+..++.++||||||+++|||++ |+.||........   .         +.+.....
T Consensus       163 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~~~~~---~---------~~~~~~~~  230 (288)
T 3kfa_A          163 GDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQV---Y---------ELLEKDYR  230 (288)
T ss_dssp             SSSSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGH---H---------HHHHTTCC
T ss_pred             CCccccccCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHH---H---------HHHhccCC
Confidence            554444444677889999999998899999999999999999999 9999976543211   1         11111111


Q ss_pred             cCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHhccc
Q 005257          599 AKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLEGKIE  641 (705)
Q Consensus       599 ~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~  641 (705)
                        ...+......+.+++..||+.||.+|||+.++++.|+...+
T Consensus       231 --~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~~~~l~~~~~  271 (288)
T 3kfa_A          231 --MERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQ  271 (288)
T ss_dssp             --CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             --CCCCCCCCHHHHHHHHHHhCCChhhCcCHHHHHHHHHHHHH
Confidence              22233345678899999999999999999999999987765

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*

Probab=100.00  E-value=3.7e-41  Score=348.48  Aligned_cols=257  Identities=27%  Similarity=0.407  Sum_probs=212.2

Q ss_pred             hCCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCCchhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEEEEe
Q 005257          363 TKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYD  442 (705)
Q Consensus       363 t~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~lV~E  442 (705)
                      .++|...+.||+|+||.||+|.+. ++..||+|++.... ...+++.+|++++.+++||||+++++++.. .+..++|||
T Consensus         7 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~lv~e   83 (268)
T 3sxs_A            7 REEITLLKELGSGQFGVVKLGKWK-GQYDVAVKMIKEGS-MSEDEFFQEAQTMMKLSHPKLVKFYGVCSK-EYPIYIVTE   83 (268)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEET-TTEEEEEEEECBTT-BCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSSEEEEEE
T ss_pred             hhheeeeeeeccCCCceEEEEEec-CceeEEEEEeccCC-CcHHHHHHHHHHHHhCCCCCEeeEEEEEcc-CCceEEEEE
Confidence            457888999999999999999887 46789999996543 345679999999999999999999999875 678899999


Q ss_pred             eCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecCCCC
Q 005257          443 YMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQ  522 (705)
Q Consensus       443 ~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~~~~  522 (705)
                      |+++++|.+++.....  .+++.+++.++.|++.||.|||+   .+|+||||||+||+++.++.+||+|||+++......
T Consensus        84 ~~~~~~L~~~l~~~~~--~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~  158 (268)
T 3sxs_A           84 YISNGCLLNYLRSHGK--GLEPSQLLEMCYDVCEGMAFLES---HQFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQ  158 (268)
T ss_dssp             CCTTCBHHHHHHHHGG--GCCHHHHHHHHHHHHHHHHHHHH---TTEEESSCSGGGEEECTTCCEEECCTTCEEECCTTC
T ss_pred             ccCCCcHHHHHHHcCC--CCCHHHHHHHHHHHHHHHHHHHH---CCeecCCcCcceEEECCCCCEEEccCccceecchhh
Confidence            9999999999976432  58999999999999999999999   999999999999999999999999999998776554


Q ss_pred             cceeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhh-CCCCCCCCCccHHHHHHHHHHhCchhHHHHHhhhcCC
Q 005257          523 VASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLS-GRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRAKG  601 (705)
Q Consensus       523 ~~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~Ellt-G~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~l~~~~  601 (705)
                      ........+|+.|+|||.+.+..++.++||||||+++|||++ |+.||......   .....+..+..           .
T Consensus       159 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~---~~~~~~~~~~~-----------~  224 (268)
T 3sxs_A          159 YVSSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNS---EVVLKVSQGHR-----------L  224 (268)
T ss_dssp             EEECCSCCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSCHH---HHHHHHHTTCC-----------C
T ss_pred             hhcccCCCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccChH---HHHHHHHcCCC-----------C
Confidence            444344456778999999988889999999999999999999 99999765431   11111111110           1


Q ss_pred             CCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHhccc
Q 005257          602 GFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLEGKIE  641 (705)
Q Consensus       602 ~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~  641 (705)
                      ..+......+.+++..||+.||++|||+.++++.|+...+
T Consensus       225 ~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~  264 (268)
T 3sxs_A          225 YRPHLASDTIYQIMYSCWHELPEKRPTFQQLLSSIEPLRE  264 (268)
T ss_dssp             CCCTTSCHHHHHHHHHTTCSSGGGSCCHHHHHHHHGGGCC
T ss_pred             CCCCcChHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhh
Confidence            1122234568899999999999999999999999987654

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...

Probab=100.00  E-value=1.2e-41  Score=363.51  Aligned_cols=257  Identities=21%  Similarity=0.382  Sum_probs=204.3

Q ss_pred             CCCCcceEEeecCceEEEEEEEcCCCeE----EEEEEeccC-CchhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceE
Q 005257          364 KGFSEENVIGVGGNGKVYKGVLEGGGAE----IAVKRISHE-NDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLM  438 (705)
Q Consensus       364 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~----vavK~i~~~-~~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~  438 (705)
                      ++|+..+.||+|+||+||+|.+..+++.    ||+|.+... .....+.+.+|+.++++++||||++++++|..  +..+
T Consensus        15 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~--~~~~   92 (327)
T 3poz_A           15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLT--STVQ   92 (327)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHCCBTTBCCEEEEEES--SSEE
T ss_pred             HHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEec--CCeE
Confidence            4688899999999999999998766654    588887544 33456789999999999999999999999975  3578


Q ss_pred             EEEeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceec
Q 005257          439 LVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMH  518 (705)
Q Consensus       439 lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~  518 (705)
                      +|+||+++|+|.+++.....  .+++..++.++.|++.||.|||+   .+|+||||||+|||++.++++||+|||+++..
T Consensus        93 ~v~e~~~~g~L~~~l~~~~~--~~~~~~~~~~~~qi~~~l~~LH~---~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~  167 (327)
T 3poz_A           93 LITQLMPFGCLLDYVREHKD--NIGSQYLLNWCVQIAKGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLL  167 (327)
T ss_dssp             EEEECCTTCBHHHHHHHSTT--SCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEEEETTEEEECCTTHHHHH
T ss_pred             EEEEecCCCcHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHhh---CCeeCCCCChheEEECCCCCEEEccCcceeEc
Confidence            99999999999999987543  69999999999999999999999   99999999999999999999999999999876


Q ss_pred             CCCCcc-eeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhh-CCCCCCCCCccHHHHHHHHHHhCchhHHHHHh
Q 005257          519 GHGQVA-STTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLS-GRRPIEEGKPNLVEMVWELMVQGKLLDALDAR  596 (705)
Q Consensus       519 ~~~~~~-~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~Ellt-G~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~  596 (705)
                      ...... ......||+.|+|||++.+..++.++|||||||++|||++ |+.||........   ...+..+         
T Consensus       168 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~---~~~~~~~---------  235 (327)
T 3poz_A          168 GAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEI---SSILEKG---------  235 (327)
T ss_dssp             TTTCC-------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGH---HHHHHTT---------
T ss_pred             cCCcccccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCCCHHHH---HHHHHcC---------
Confidence            544322 2233466889999999999999999999999999999999 9999986543211   1111111         


Q ss_pred             hhcCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHhccc
Q 005257          597 LRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLEGKIE  641 (705)
Q Consensus       597 l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~  641 (705)
                      ..  ...+......+.+++..||+.||++||++.++++.|+....
T Consensus       236 ~~--~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~~~~~  278 (327)
T 3poz_A          236 ER--LPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMAR  278 (327)
T ss_dssp             CC--CCCCTTBCHHHHHHHHHHTCSCGGGSCCHHHHHHHHHHHHT
T ss_pred             CC--CCCCccCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHh
Confidence            11  12233445678899999999999999999999999987654

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A

Probab=100.00  E-value=3.6e-41  Score=375.84  Aligned_cols=253  Identities=31%  Similarity=0.429  Sum_probs=209.8

Q ss_pred             hCCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCCchhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEEEEe
Q 005257          363 TKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYD  442 (705)
Q Consensus       363 t~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~lV~E  442 (705)
                      .++|...+.||+|+||.||+|.+.  ++.||||+++...  ..+.|.+|+.+|++++||||++++++|...++.+++|||
T Consensus       192 ~~~~~~~~~lG~G~fg~V~~~~~~--~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~iv~e  267 (450)
T 1k9a_A          192 MKELKLLQTIGKGEFGDVMLGDYR--GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTE  267 (450)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEET--TEEEEEEEESSCT--TSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSCEEEEEE
T ss_pred             hHHeEEEeeecCcCCeeEEEEEec--CCeEEEEEeCCch--HHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCceEEEEE
Confidence            356778899999999999999986  6799999997543  567899999999999999999999998875668999999


Q ss_pred             eCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecCCCC
Q 005257          443 YMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQ  522 (705)
Q Consensus       443 ~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~~~~  522 (705)
                      |+++|+|.+++...... .+++..++.++.|++.||.|||+   ++|+||||||+|||++.++.+||+|||+++......
T Consensus       268 ~~~~g~L~~~l~~~~~~-~~~~~~~~~~~~qi~~~l~~LH~---~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~  343 (450)
T 1k9a_A          268 YMAKGSLVDYLRSRGRS-VLGGDCLLKFSLDVCEAMEYLEG---NNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ  343 (450)
T ss_dssp             CCTTCBHHHHHHHHCTT-TCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEECTTSCEEECCCTTCEECC---
T ss_pred             ecCCCcHHHHHHhcCCC-CCCHHHHHHHHHHHHHHHHHHHh---CCeeCCCCCHhhEEECCCCCEEEeeCCCcccccccc
Confidence            99999999999875432 57999999999999999999999   999999999999999999999999999998643321


Q ss_pred             cceeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhh-CCCCCCCCCccHHHHHHHHHHhCchhHHHHHhhhcCC
Q 005257          523 VASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLS-GRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRAKG  601 (705)
Q Consensus       523 ~~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~Ellt-G~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~l~~~~  601 (705)
                          ....+++.|+|||++.+..++.++|||||||++|||++ |+.||.......   +...+..+         .+  .
T Consensus       344 ----~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~---~~~~i~~~---------~~--~  405 (450)
T 1k9a_A          344 ----DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKD---VVPRVEKG---------YK--M  405 (450)
T ss_dssp             -------CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCTTT---HHHHHHTT---------CC--C
T ss_pred             ----cCCCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHH---HHHHHHcC---------CC--C
Confidence                12357889999999999999999999999999999998 999997644321   11222222         11  2


Q ss_pred             CCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHhccc
Q 005257          602 GFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLEGKIE  641 (705)
Q Consensus       602 ~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~  641 (705)
                      ..+..+...+.+++..||+.||++|||+.++++.|+....
T Consensus       406 ~~p~~~~~~l~~li~~cl~~dp~~Rpt~~~l~~~L~~i~~  445 (450)
T 1k9a_A          406 DAPDGCPPAVYDVMKNCWHLDAATRPTFLQLREQLEHIRT  445 (450)
T ss_dssp             CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             CCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHH
Confidence            2333455678899999999999999999999999987654

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}

Probab=100.00  E-value=8.7e-42  Score=368.63  Aligned_cols=250  Identities=23%  Similarity=0.345  Sum_probs=203.8

Q ss_pred             HhCCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccC---CchhHHHHHHHHHHhccC-CCCCcceeeeeeeeccCce
Q 005257          362 ATKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHE---NDGGTRAFLAEISSLGRL-KHKSLVGLRGWCKREKGSL  437 (705)
Q Consensus       362 at~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~---~~~~~~~~~~Ei~~l~~l-~Hpniv~l~g~~~~~~~~~  437 (705)
                      ..++|...+.||+|+||+||+|.++.+++.||||+++..   .....+.+.+|..++..+ +||||+++++++.. .+.+
T Consensus        21 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~-~~~~   99 (353)
T 3txo_A           21 GIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQT-PDRL   99 (353)
T ss_dssp             --CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEEC-SSEE
T ss_pred             chhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEe-CCEE
Confidence            346899999999999999999999999999999999754   233456788999999988 69999999998876 6789


Q ss_pred             EEEEeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeecccee
Q 005257          438 MLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARM  517 (705)
Q Consensus       438 ~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~  517 (705)
                      ++||||+++|+|..++.+..   .+++.++..++.||+.||.|||+   ++|+||||||+|||++.++.+||+|||+++.
T Consensus       100 ~lv~E~~~gg~L~~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH~---~givHrDlkp~NILl~~~g~ikL~DFG~a~~  173 (353)
T 3txo_A          100 FFVMEFVNGGDLMFHIQKSR---RFDEARARFYAAEIISALMFLHD---KGIIYRDLKLDNVLLDHEGHCKLADFGMCKE  173 (353)
T ss_dssp             EEEEECCCSCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTSCEEECCCTTCBC
T ss_pred             EEEEeCCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHH---CCCcccCCCHHHEEECCCCCEEEccccceee
Confidence            99999999999999997653   69999999999999999999999   9999999999999999999999999999985


Q ss_pred             cCCCCcceeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhHHHHHhh
Q 005257          518 HGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDARL  597 (705)
Q Consensus       518 ~~~~~~~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~l  597 (705)
                      ..... ......+||+.|+|||++.+..++.++|||||||++|||++|+.||......   .+...+..+.         
T Consensus       174 ~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~---~~~~~i~~~~---------  240 (353)
T 3txo_A          174 GICNG-VTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENED---DLFEAILNDE---------  240 (353)
T ss_dssp             SCC----------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCSSHH---HHHHHHHHCC---------
T ss_pred             cccCC-ccccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCCCHH---HHHHHHHcCC---------
Confidence            43322 2234468999999999998888999999999999999999999999865431   1222222221         


Q ss_pred             hcCCCCCHHHHHHHHHHHHHcCCCCCCCCCCH------HHHHH
Q 005257          598 RAKGGFDEDEVERVLHLGLLCAYPDPRARPTM------RQVVK  634 (705)
Q Consensus       598 ~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~------~evl~  634 (705)
                         ..++......+.+++..||+.||++||++      .|+++
T Consensus       241 ---~~~p~~~~~~~~~li~~lL~~dP~~R~~~~~~~~~~~il~  280 (353)
T 3txo_A          241 ---VVYPTWLHEDATGILKSFMTKNPTMRLGSLTQGGEHAILR  280 (353)
T ss_dssp             ---CCCCTTSCHHHHHHHHHHTCSSGGGSTTSGGGTCTHHHHT
T ss_pred             ---CCCCCCCCHHHHHHHHHHhhhCHHHccCCcccCCHHHHhh
Confidence               22333344568899999999999999998      66665

>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*

Probab=100.00  E-value=4e-41  Score=353.32  Aligned_cols=263  Identities=19%  Similarity=0.216  Sum_probs=212.7

Q ss_pred             hCCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCCchhHHHHHHHHHHhccC-CCCCcceeeeeeeeccCceEEEE
Q 005257          363 TKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRL-KHKSLVGLRGWCKREKGSLMLVY  441 (705)
Q Consensus       363 t~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~~~~~~~~~Ei~~l~~l-~Hpniv~l~g~~~~~~~~~~lV~  441 (705)
                      .++|...+.||+|+||.||+|.+..+++.||||++....  ..+.+.+|+.++..+ +|+|++++++++.. ....++||
T Consensus         9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~-~~~~~lv~   85 (298)
T 1csn_A            9 GVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS--DAPQLRDEYRTYKLLAGCTGIPNVYYFGQE-GLHNVLVI   85 (298)
T ss_dssp             TTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCT--TSCCHHHHHHHHHHTTTCTTCCCEEEEEEE-TTEEEEEE
T ss_pred             ccceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCC--ccHHHHHHHHHHHHHhcCCCCCeEEeecCC-CceeEEEE
Confidence            457889999999999999999998899999999986443  334678899999999 79999999998875 67889999


Q ss_pred             eeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCC-----eeeeeeccce
Q 005257          442 DYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMN-----GRLGDFGLAR  516 (705)
Q Consensus       442 E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~-----~kL~DFGla~  516 (705)
                      ||+ +++|.+++.....  .+++.+++.++.|++.||.|||+   .+|+||||||+|||++.++.     +||+|||+++
T Consensus        86 e~~-~~~L~~~l~~~~~--~~~~~~~~~i~~qi~~~l~~lH~---~~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~  159 (298)
T 1csn_A           86 DLL-GPSLEDLLDLCGR--KFSVKTVAMAAKQMLARVQSIHE---KSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVK  159 (298)
T ss_dssp             ECC-CCBHHHHHHHTTT--CCCHHHHHHHHHHHHHHHHHHHT---TTEECCCCCGGGEEECCSSSTTTTCEEECCCTTCE
T ss_pred             Eec-CCCHHHHHHHhcc--CCCHHHHHHHHHHHHHHHHHHHh---CCEecCCCCHHHEEeccCCCCCCCeEEEEECcccc
Confidence            999 9999999976533  59999999999999999999998   99999999999999987776     9999999998


Q ss_pred             ecCCCCcc------eeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchh
Q 005257          517 MHGHGQVA------STTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLL  590 (705)
Q Consensus       517 ~~~~~~~~------~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~  590 (705)
                      ........      ......||+.|+|||++.+..++.++|||||||++|||++|+.||..............+..+...
T Consensus       160 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~  239 (298)
T 1csn_A          160 FYRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQS  239 (298)
T ss_dssp             ESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHHHHHHH
T ss_pred             ccccccccccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhhccccHHHHHHHHhhccC
Confidence            77654321      223467999999999999989999999999999999999999999875432222222222111110


Q ss_pred             HHHHHhhhcCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHhccc
Q 005257          591 DALDARLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLEGKIE  641 (705)
Q Consensus       591 ~~id~~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~  641 (705)
                      .... .+      .....+.+.+++..||+.||++||++.++++.|+...+
T Consensus       240 ~~~~-~~------~~~~~~~l~~li~~~l~~dp~~RP~~~~l~~~l~~~~~  283 (298)
T 1csn_A          240 TPLR-EL------CAGFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKVLE  283 (298)
T ss_dssp             SCHH-HH------TTTSCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHH
T ss_pred             ccHH-HH------HhhCcHHHHHHHHHHhcCCcccCCCHHHHHHHHHHHHH
Confidence            0000 00      01223578899999999999999999999999998766

>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*

Probab=100.00  E-value=3.3e-41  Score=360.35  Aligned_cols=262  Identities=17%  Similarity=0.202  Sum_probs=211.9

Q ss_pred             hCCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCCchhHHHHHHHHHHhccC-CCCCcceeeeeeeeccCceEEEE
Q 005257          363 TKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRL-KHKSLVGLRGWCKREKGSLMLVY  441 (705)
Q Consensus       363 t~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~~~~~~~~~Ei~~l~~l-~Hpniv~l~g~~~~~~~~~~lV~  441 (705)
                      .++|...+.||+|+||.||+|.+..+++.||||++.....  .+.+.+|+++++++ +||||+++++++.. ....++||
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~E~~~l~~l~~h~~i~~~~~~~~~-~~~~~lv~   84 (330)
T 2izr_A            8 GPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSR--APQLHLEYRFYKQLGSGDGIPQVYYFGPC-GKYNAMVL   84 (330)
T ss_dssp             TTTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTCS--SCCHHHHHHHHHHHCSCTTSCCEEEEEEE-TTEEEEEE
T ss_pred             cCCeEEEEEeeccCCceEEEEEECCCCcEEEEEEeccccc--hHHHHHHHHHHHHhhCCCCCCEEEEEEec-CCccEEEE
Confidence            3578899999999999999999998999999999875432  34688999999999 99999999998876 67889999


Q ss_pred             eeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCC-----eeeeeeccce
Q 005257          442 DYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMN-----GRLGDFGLAR  516 (705)
Q Consensus       442 E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~-----~kL~DFGla~  516 (705)
                      ||+ +++|.+++.....  .+++.+++.++.|++.||.|||+   .+|+||||||+|||++.++.     +||+|||+++
T Consensus        85 e~~-~~~L~~~~~~~~~--~~~~~~~~~i~~qi~~~l~~LH~---~~iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a~  158 (330)
T 2izr_A           85 ELL-GPSLEDLFDLCDR--TFSLKTVLMIAIQLISRMEYVHS---KNLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAK  158 (330)
T ss_dssp             ECC-CCBHHHHHHHTTT--CCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECCGGGTCTTSEEECCCTTCE
T ss_pred             EeC-CCCHHHHHHHcCC--CCCHHHHHHHHHHHHHHHHHHHh---CCeeccCCCHHHeeeccCCCCCCceEEEEEcccce
Confidence            999 9999999986532  69999999999999999999999   99999999999999998887     9999999998


Q ss_pred             ecCCCCcc------eeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchh
Q 005257          517 MHGHGQVA------STTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLL  590 (705)
Q Consensus       517 ~~~~~~~~------~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~  590 (705)
                      ........      ......||+.|+|||++.+..++.++|||||||++|||++|+.||..............+......
T Consensus       159 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~~~~~~~~~~~i~~~~~~  238 (330)
T 2izr_A          159 EYIDPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIGDTKRA  238 (330)
T ss_dssp             ESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCSSHHHHHHHHHHHHHH
T ss_pred             eeecCCCCccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCccccccccHHHHHHHHHhhhcc
Confidence            76543321      123468999999999999999999999999999999999999999875433222222222111110


Q ss_pred             HHHHHhhhcCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHhccc
Q 005257          591 DALDARLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLEGKIE  641 (705)
Q Consensus       591 ~~id~~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~  641 (705)
                      .... .+.  .    ..+ .+.+++..||+.||.+||++.++.+.|+....
T Consensus       239 ~~~~-~~~--~----~~p-~~~~li~~~l~~~p~~RP~~~~l~~~l~~~~~  281 (330)
T 2izr_A          239 TPIE-VLC--E----NFP-EMATYLRYVRRLDFFEKPDYDYLRKLFTDLFD  281 (330)
T ss_dssp             SCHH-HHT--T----TCH-HHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHH
T ss_pred             CCHH-HHh--c----cCh-HHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHH
Confidence            0000 000  0    112 78899999999999999999999999987765

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B

Probab=100.00  E-value=8.4e-42  Score=381.42  Aligned_cols=259  Identities=25%  Similarity=0.439  Sum_probs=212.7

Q ss_pred             HHhCCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCCchhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEEE
Q 005257          361 AATKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLV  440 (705)
Q Consensus       361 ~at~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~lV  440 (705)
                      ...++|...+.||+|+||.||+|.+.. +..||||+++... ...+.|.+|+.+|++++||||+++++++.  ...+++|
T Consensus       185 i~~~~~~~~~~lG~G~fg~V~~~~~~~-~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~l~~~~~--~~~~~lv  260 (454)
T 1qcf_A          185 IPRESLKLEKKLGAGQFGEVWMATYNK-HTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAVVT--KEPIYII  260 (454)
T ss_dssp             CCGGGEEEEEEEECCSSEEEEEEEETT-TEEEEEEEECTTS-BCHHHHHHHHHHHTTCCCTTBCCEEEEEC--SSSCEEE
T ss_pred             echHHeEEEEEcccCCceEEEEEEECC-ccEEEEEEecCCC-ccHHHHHHHHHHHhhCCCCCEeeEEEEEe--CCccEEE
Confidence            345678889999999999999999874 6789999997543 45678999999999999999999999885  4578999


Q ss_pred             EeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecCC
Q 005257          441 YDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGH  520 (705)
Q Consensus       441 ~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~~  520 (705)
                      |||+++|+|.+++..... ..+++.+++.++.||+.||.|||+   ++|+||||||+|||++.++.+||+|||+++....
T Consensus       261 ~e~~~~g~L~~~l~~~~~-~~~~~~~~~~~~~qi~~~l~~LH~---~~ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~~  336 (454)
T 1qcf_A          261 TEFMAKGSLLDFLKSDEG-SKQPLPKLIDFSAQIAEGMAFIEQ---RNYIHRDLRAANILVSASLVCKIADFGLARVIED  336 (454)
T ss_dssp             ECCCTTCBHHHHHHSHHH-HTCCHHHHHHHHHHHHHHHHHHHH---TTCCCSSCSGGGEEECTTCCEEECSTTGGGGBCC
T ss_pred             EeecCCCcHHHHHHhccC-CCCCHHHHHHHHHHHHHHHHHHHh---CCccCCCCCHHHEEECCCCcEEEeeCCCceEcCC
Confidence            999999999999975422 258899999999999999999999   9999999999999999999999999999987654


Q ss_pred             CCcceeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhh-CCCCCCCCCccHHHHHHHHHHhCchhHHHHHhhhc
Q 005257          521 GQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLS-GRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRA  599 (705)
Q Consensus       521 ~~~~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~Ellt-G~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~l~~  599 (705)
                      ..........+|+.|+|||++....++.++|||||||++|||++ |+.||......   .+...+..+         .+ 
T Consensus       337 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~~~~---~~~~~i~~~---------~~-  403 (454)
T 1qcf_A          337 NEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNP---EVIRALERG---------YR-  403 (454)
T ss_dssp             HHHHTTCSSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHH---HHHHHHHHT---------CC-
T ss_pred             CceeccCCCcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCCCHH---HHHHHHHcC---------CC-
Confidence            32222223356789999999998899999999999999999999 99999765421   111222221         11 


Q ss_pred             CCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHhccc
Q 005257          600 KGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLEGKIE  641 (705)
Q Consensus       600 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~  641 (705)
                       ...+..+...+.+++..||+.||++|||+.++++.|+....
T Consensus       404 -~~~~~~~~~~l~~li~~cl~~dp~~RPt~~~i~~~L~~~~~  444 (454)
T 1qcf_A          404 -MPRPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDDFYT  444 (454)
T ss_dssp             -CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSS
T ss_pred             -CCCCCCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHHh
Confidence             11233445678999999999999999999999999997765

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*

Probab=100.00  E-value=2.4e-41  Score=352.76  Aligned_cols=258  Identities=24%  Similarity=0.352  Sum_probs=200.1

Q ss_pred             hCCCCcceEEeecCceEEEEEEEcCC---CeEEEEEEeccCC-chhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceE
Q 005257          363 TKGFSEENVIGVGGNGKVYKGVLEGG---GAEIAVKRISHEN-DGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLM  438 (705)
Q Consensus       363 t~~f~~~~~LG~G~fg~Vy~~~~~~~---~~~vavK~i~~~~-~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~  438 (705)
                      .++|...+.||+|+||.||+|.+..+   +..||+|++.... ....+.+.+|+.++++++||||+++++++.  ++..+
T Consensus        14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~--~~~~~   91 (281)
T 1mp8_A           14 RERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT--ENPVW   91 (281)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC--SSSCE
T ss_pred             hHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCccceEEEEEc--cCccE
Confidence            45788899999999999999998643   4679999987643 344567999999999999999999999874  45789


Q ss_pred             EEEeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceec
Q 005257          439 LVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMH  518 (705)
Q Consensus       439 lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~  518 (705)
                      +||||+++|+|.+++.....  .+++.+++.++.|++.||.|||+   .+|+||||||+|||++.++.+||+|||+++..
T Consensus        92 lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~  166 (281)
T 1mp8_A           92 IIMELCTLGELRSFLQVRKY--SLDLASLILYAYQLSTALAYLES---KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM  166 (281)
T ss_dssp             EEEECCTTEEHHHHHHHTTT--TSCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEEEETTEEEECC-------
T ss_pred             EEEecCCCCCHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHh---CCeecccccHHHEEECCCCCEEECcccccccc
Confidence            99999999999999976432  58999999999999999999999   99999999999999999999999999999876


Q ss_pred             CCCCcceeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhh-CCCCCCCCCccHHHHHHHHHHhCchhHHHHHhh
Q 005257          519 GHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLS-GRRPIEEGKPNLVEMVWELMVQGKLLDALDARL  597 (705)
Q Consensus       519 ~~~~~~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~Ellt-G~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~l  597 (705)
                      ............+|+.|+|||++.+..++.++|||||||++|||++ |+.||.......   ....+..+..        
T Consensus       167 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~~~---~~~~i~~~~~--------  235 (281)
T 1mp8_A          167 EDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNND---VIGRIENGER--------  235 (281)
T ss_dssp             ------------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG---HHHHHHTTCC--------
T ss_pred             CcccccccccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCCHHH---HHHHHHcCCC--------
Confidence            5544333344567889999999998899999999999999999996 999997654321   1111111111        


Q ss_pred             hcCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHhccc
Q 005257          598 RAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLEGKIE  641 (705)
Q Consensus       598 ~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~  641 (705)
                         ...+......+.+++..||+.||++|||+.++++.|+...+
T Consensus       236 ---~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~  276 (281)
T 1mp8_A          236 ---LPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILE  276 (281)
T ss_dssp             ---CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             ---CCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHH
Confidence               12233445678899999999999999999999999987654

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*

Probab=100.00  E-value=8.2e-41  Score=349.41  Aligned_cols=253  Identities=25%  Similarity=0.475  Sum_probs=206.2

Q ss_pred             hCCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCCchh-------HHHHHHHHHHhccCCCCCcceeeeeeeeccC
Q 005257          363 TKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGG-------TRAFLAEISSLGRLKHKSLVGLRGWCKREKG  435 (705)
Q Consensus       363 t~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~~~-------~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~  435 (705)
                      .++|...+.||+|+||.||+|.+..+++.||||++.......       .+.+.+|++++++++||||+++++++..   
T Consensus        18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~---   94 (287)
T 4f0f_A           18 DNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHN---   94 (287)
T ss_dssp             STTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETT---
T ss_pred             hccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecC---
Confidence            467888999999999999999999899999999986543221       1678999999999999999999998854   


Q ss_pred             ceEEEEeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCC--eeecCCCCCCeEEccCCC-----ee
Q 005257          436 SLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKK--VLHRDIKSSNVLLDKEMN-----GR  508 (705)
Q Consensus       436 ~~~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~--iiHrDLkp~NILld~~~~-----~k  508 (705)
                      ..++||||+++|+|.+++....  ..+++..++.++.|++.||.|||+   .+  |+||||||+|||++.++.     +|
T Consensus        95 ~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~~l~~~l~~lH~---~~~~ivH~dikp~Nil~~~~~~~~~~~~k  169 (287)
T 4f0f_A           95 PPRMVMEFVPCGDLYHRLLDKA--HPIKWSVKLRLMLDIALGIEYMQN---QNPPIVHRDLRSPNIFLQSLDENAPVCAK  169 (287)
T ss_dssp             TTEEEEECCTTCBHHHHHHCTT--SCCCHHHHHHHHHHHHHHHHHHHT---SSSCCBCSCCSGGGEEESCCCTTCSCCEE
T ss_pred             CCeEEEEecCCCCHHHHHhccc--CCccHHHHHHHHHHHHHHHHHHHh---CCCCeecCCCCcceEEEeccCCCCceeEE
Confidence            2379999999999999887543  269999999999999999999998   78  999999999999988776     99


Q ss_pred             eeeeccceecCCCCcceeeeeeccccCCCccccc--cCCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHh
Q 005257          509 LGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFS--SGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQ  586 (705)
Q Consensus       509 L~DFGla~~~~~~~~~~~~~~~gt~~y~APE~~~--~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~  586 (705)
                      |+|||+++....    ......||+.|+|||++.  ...++.++|||||||++|||++|+.||.................
T Consensus       170 l~Dfg~~~~~~~----~~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~  245 (287)
T 4f0f_A          170 VADFGLSQQSVH----SVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREE  245 (287)
T ss_dssp             ECCCTTCBCCSS----CEECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCCCHHHHHHHHHHS
T ss_pred             eCCCCccccccc----cccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCccccccHHHHHHHHhcc
Confidence            999999985433    233457899999999984  45578999999999999999999999986554322222111111


Q ss_pred             CchhHHHHHhhhcCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHh
Q 005257          587 GKLLDALDARLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLEG  638 (705)
Q Consensus       587 ~~~~~~id~~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  638 (705)
                      +         .  ....+......+.+++..||+.||++|||+.++++.|+.
T Consensus       246 ~---------~--~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~  286 (287)
T 4f0f_A          246 G---------L--RPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSE  286 (287)
T ss_dssp             C---------C--CCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHT
T ss_pred             C---------C--CCCCCcccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHh
Confidence            1         1  122334445678999999999999999999999999975

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*

Probab=100.00  E-value=4.9e-41  Score=353.14  Aligned_cols=263  Identities=25%  Similarity=0.421  Sum_probs=201.0

Q ss_pred             hCCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCCchhHHHHHHHHHHhcc--CCCCCcceeeeeeeec---cCce
Q 005257          363 TKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGR--LKHKSLVGLRGWCKRE---KGSL  437 (705)
Q Consensus       363 t~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~~~~~~~~~Ei~~l~~--l~Hpniv~l~g~~~~~---~~~~  437 (705)
                      .++|...+.||+|+||+||+|.+  +++.||||++...   ..+.+.+|.+++..  ++||||+++++++...   ...+
T Consensus         7 ~~~y~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~---~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~   81 (301)
T 3q4u_A            7 ARDITLLECVGKGRYGEVWRGSW--QGENVAVKIFSSR---DEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQL   81 (301)
T ss_dssp             GGGCEEEEEEEECSSEEEEEEEE--TTEEEEEEEECGG---GHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEEEE
T ss_pred             cCcEEEEEeeccCCCcEEEEEEE--CCEEEEEEEeccc---cchhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCcee
Confidence            46788999999999999999988  4789999998543   34555666666655  7999999999987642   3458


Q ss_pred             EEEEeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCC-----CCCeeecCCCCCCeEEccCCCeeeeee
Q 005257          438 MLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGW-----EKKVLHRDIKSSNVLLDKEMNGRLGDF  512 (705)
Q Consensus       438 ~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~-----~~~iiHrDLkp~NILld~~~~~kL~DF  512 (705)
                      ++||||+++|+|.+++..    ..+++..+++++.|++.||.|||...     .++|+||||||+|||++.++.+||+||
T Consensus        82 ~lv~e~~~~g~L~~~l~~----~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~Nill~~~~~~kl~Df  157 (301)
T 3q4u_A           82 WLITHYHEMGSLYDYLQL----TTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADL  157 (301)
T ss_dssp             EEEECCCTTCBHHHHHTT----CCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCEEECSCCCGGGEEECTTSCEEECCC
T ss_pred             EEehhhccCCCHHHHHhh----cccCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCeecCCCChHhEEEcCCCCEEEeeC
Confidence            999999999999999943    26999999999999999999999211     299999999999999999999999999


Q ss_pred             ccceecCCCCcce---eeeeeccccCCCccccccC------CCCccccEEEEehhHHHHhhC----------CCCCCCCC
Q 005257          513 GLARMHGHGQVAS---TTRVVGTVGYLAPEVFSSG------RASTQTDVFGFGILILEVLSG----------RRPIEEGK  573 (705)
Q Consensus       513 Gla~~~~~~~~~~---~~~~~gt~~y~APE~~~~~------~~s~ksDVwS~Gvvl~ElltG----------~~Pf~~~~  573 (705)
                      |+++.........   .....||+.|+|||++.+.      .++.++|||||||++|||++|          +.||....
T Consensus       158 g~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~pf~~~~  237 (301)
T 3q4u_A          158 GLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVV  237 (301)
T ss_dssp             TTCEEEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTS
T ss_pred             CCeeecccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCccccccccccccccC
Confidence            9998765443322   2234799999999999876      445799999999999999999          88886532


Q ss_pred             c--cHHHHHHHHHHhCchhHHHHHhhhcCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHhc
Q 005257          574 P--NLVEMVWELMVQGKLLDALDARLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLEGK  639 (705)
Q Consensus       574 ~--~~~~~v~~~~~~~~~~~~id~~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~  639 (705)
                      .  .................    .+. ....+......+.+++..||+.||++|||+.++++.|+.+
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~----~~~-~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i  300 (301)
T 3q4u_A          238 PNDPSFEDMRKVVCVDQQRP----NIP-NRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTKI  300 (301)
T ss_dssp             CSSCCHHHHHHHHTTSCCCC----CCC-GGGGGSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHH
T ss_pred             CCCcchhhhhHHHhccCCCC----CCC-hhhccCccHHHHHHHHHHHhhcChhhCCCHHHHHHHHhcc
Confidence            2  11111111111111000    000 0011234678899999999999999999999999999853

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}

Probab=100.00  E-value=1.4e-40  Score=355.32  Aligned_cols=249  Identities=22%  Similarity=0.337  Sum_probs=207.0

Q ss_pred             hCCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCCch------hHHHHHHHHHHhccCCCCCcceeeeeeeeccCc
Q 005257          363 TKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDG------GTRAFLAEISSLGRLKHKSLVGLRGWCKREKGS  436 (705)
Q Consensus       363 t~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~~------~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~  436 (705)
                      .++|...+.||+|+||.||+|.+..+++.||+|++......      ..+.+.+|+.++++++||||+++++++.. ...
T Consensus        10 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~   88 (326)
T 2y0a_A           10 DDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYEN-KTD   88 (326)
T ss_dssp             HHHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEEC-SSE
T ss_pred             ccceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEe-CCE
Confidence            34688899999999999999999999999999998765321      35779999999999999999999998876 678


Q ss_pred             eEEEEeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCC----Ceeeeee
Q 005257          437 LMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEM----NGRLGDF  512 (705)
Q Consensus       437 ~~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~----~~kL~DF  512 (705)
                      .++||||+++|+|.+++...   ..+++.++..++.|++.||.|||+   .+|+||||||+|||++.++    .+||+||
T Consensus        89 ~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~i~~qi~~al~~lH~---~~ivH~Dlkp~NIll~~~~~~~~~~kl~Df  162 (326)
T 2y0a_A           89 VILILELVAGGELFDFLAEK---ESLTEEEATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDF  162 (326)
T ss_dssp             EEEEEECCCSCBHHHHHTTS---SCCBHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEESCSSSSSCCEEECCC
T ss_pred             EEEEEEcCCCCCHHHHHHhc---CCcCHHHHHHHHHHHHHHHHHHHH---CCeEcCCCCHHHEEEecCCCCCCCEEEEEC
Confidence            99999999999999999643   269999999999999999999998   9999999999999999887    7999999


Q ss_pred             ccceecCCCCcceeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhHH
Q 005257          513 GLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDA  592 (705)
Q Consensus       513 Gla~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~~  592 (705)
                      |+++.......  .....||+.|+|||++.+..++.++|||||||++|||++|+.||......  + ....+....    
T Consensus       163 g~a~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~--~-~~~~~~~~~----  233 (326)
T 2y0a_A          163 GLAHKIDFGNE--FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQ--E-TLANVSAVN----  233 (326)
T ss_dssp             TTCEECCTTSC--CCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHH--H-HHHHHHHTC----
T ss_pred             CCCeECCCCCc--cccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHH--H-HHHHHHhcC----
Confidence            99987754332  23357999999999999889999999999999999999999999765421  1 111111111    


Q ss_pred             HHHhhhcCCCCCH----HHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 005257          593 LDARLRAKGGFDE----DEVERVLHLGLLCAYPDPRARPTMRQVVKV  635 (705)
Q Consensus       593 id~~l~~~~~~~~----~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  635 (705)
                              ..++.    .....+.+++..||+.||++|||+.|++++
T Consensus       234 --------~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h  272 (326)
T 2y0a_A          234 --------YEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQH  272 (326)
T ss_dssp             --------CCCCHHHHTTSCHHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred             --------CCcCccccccCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence                    11111    123567889999999999999999999884

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}

Probab=100.00  E-value=1.4e-40  Score=354.27  Aligned_cols=253  Identities=22%  Similarity=0.324  Sum_probs=202.7

Q ss_pred             CCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCC-chhHHHHHHHHHHhccCCCCCcceeeeeeeeccC-------
Q 005257          364 KGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHEN-DGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKG-------  435 (705)
Q Consensus       364 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~-~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~-------  435 (705)
                      ++|+..+.||+|+||.||+|.+..+++.||||+++... ....+.+.+|++++++++||||+++++++.+...       
T Consensus         6 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~   85 (332)
T 3qd2_B            6 TDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQEEM   85 (332)
T ss_dssp             HHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCSTTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHHHH
T ss_pred             hcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhhhh
Confidence            46888999999999999999999899999999997543 3456789999999999999999999998865321       


Q ss_pred             -------------------------------------------------ceEEEEeeCCCCChhHHHHhcCCCCcccHHH
Q 005257          436 -------------------------------------------------SLMLVYDYMENGSLDKWIFQCDGSMMLSCEE  466 (705)
Q Consensus       436 -------------------------------------------------~~~lV~E~~~~gsL~~~L~~~~~~~~l~~~~  466 (705)
                                                                       .+++||||+++|+|.+++.........++..
T Consensus        86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~  165 (332)
T 3qd2_B           86 DEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREHGV  165 (332)
T ss_dssp             HC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCSGGGSCHHH
T ss_pred             hhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccCccchhhHH
Confidence                                                             3799999999999999998765555677788


Q ss_pred             HHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecCCCCc-----------ceeeeeeccccC
Q 005257          467 RIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQV-----------ASTTRVVGTVGY  535 (705)
Q Consensus       467 ~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~~~~~-----------~~~~~~~gt~~y  535 (705)
                      ++.++.|++.||.|||+   .+|+||||||+|||++.++.+||+|||+++.......           .......||+.|
T Consensus       166 ~~~i~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y  242 (332)
T 3qd2_B          166 CLHIFIQIAEAVEFLHS---KGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTKLY  242 (332)
T ss_dssp             HHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC-CGGG
T ss_pred             HHHHHHHHHHHHHHHHh---CCeeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccCCCcCc
Confidence            99999999999999998   9999999999999999999999999999987765421           112335799999


Q ss_pred             CCccccccCCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhHHHHHhhhcCCCCCHHHHHHHHHHH
Q 005257          536 LAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRAKGGFDEDEVERVLHLG  615 (705)
Q Consensus       536 ~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~l~~~~~~~~~~~~~l~~l~  615 (705)
                      +|||++.+..++.++|||||||++|||++|..|+...     .........+.....           .......+.+++
T Consensus       243 ~aPE~~~~~~~~~~~Di~slG~il~el~~~~~~~~~~-----~~~~~~~~~~~~~~~-----------~~~~~~~~~~li  306 (332)
T 3qd2_B          243 MSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQMER-----VRIITDVRNLKFPLL-----------FTQKYPQEHMMV  306 (332)
T ss_dssp             SCHHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHHHH-----HHHHHHHHTTCCCHH-----------HHHHCHHHHHHH
T ss_pred             cChHHhcCCCCcchhhHHHHHHHHHHHHHcCCChhHH-----HHHHHHhhccCCCcc-----------cccCChhHHHHH
Confidence            9999999989999999999999999999987664211     111111222211111           122345678899


Q ss_pred             HHcCCCCCCCCCCHHHHHHH
Q 005257          616 LLCAYPDPRARPTMRQVVKV  635 (705)
Q Consensus       616 ~~Cl~~dP~~RPs~~evl~~  635 (705)
                      ..||+.||++|||+.|++++
T Consensus       307 ~~~l~~~p~~Rps~~~~l~~  326 (332)
T 3qd2_B          307 QDMLSPSPTERPEATDIIEN  326 (332)
T ss_dssp             HHHHCSSGGGSCCHHHHHHS
T ss_pred             HHHccCCCCcCCCHHHHhhc
Confidence            99999999999999999873

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}

Probab=100.00  E-value=6.6e-41  Score=366.69  Aligned_cols=247  Identities=23%  Similarity=0.348  Sum_probs=202.5

Q ss_pred             hCCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCC---chhHHHHHHHHHHhccC-CCCCcceeeeeeeeccCceE
Q 005257          363 TKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHEN---DGGTRAFLAEISSLGRL-KHKSLVGLRGWCKREKGSLM  438 (705)
Q Consensus       363 t~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~---~~~~~~~~~Ei~~l~~l-~Hpniv~l~g~~~~~~~~~~  438 (705)
                      .++|...++||+|+||+||+|+++.+++.||||+++...   ....+.+.+|..++.++ +||||+++++++.. +..++
T Consensus        51 ~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~-~~~~~  129 (396)
T 4dc2_A           51 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQT-ESRLF  129 (396)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEEC-SSEEE
T ss_pred             hhHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEE-CCEEE
Confidence            457889999999999999999999999999999997642   23345688899999887 89999999998876 67899


Q ss_pred             EEEeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceec
Q 005257          439 LVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMH  518 (705)
Q Consensus       439 lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~  518 (705)
                      +||||+++|+|..++.+..   .+++..+..++.||+.||.|||+   ++|+||||||+|||++.++.+||+|||+++..
T Consensus       130 lV~E~~~gg~L~~~l~~~~---~l~~~~~~~~~~qi~~aL~~LH~---~givHrDLKp~NILl~~~g~ikL~DFGla~~~  203 (396)
T 4dc2_A          130 FVIEYVNGGDLMFHMQRQR---KLPEEHARFYSAEISLALNYLHE---RGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEG  203 (396)
T ss_dssp             EEEECCTTCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTSCEEECCCTTCBCC
T ss_pred             EEEEcCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHH---CCEEeccCCHHHEEECCCCCEEEeecceeeec
Confidence            9999999999999997643   69999999999999999999999   99999999999999999999999999999863


Q ss_pred             CCCCcceeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhhCCCCCCCCCc------cHHHHHHHHHHhCchhHH
Q 005257          519 GHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKP------NLVEMVWELMVQGKLLDA  592 (705)
Q Consensus       519 ~~~~~~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~------~~~~~v~~~~~~~~~~~~  592 (705)
                      .... ......+||+.|+|||++.+..++.++|||||||++|||++|+.||.....      ...+.+.+.+..      
T Consensus       204 ~~~~-~~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~~~~~~~~~~i~~------  276 (396)
T 4dc2_A          204 LRPG-DTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILE------  276 (396)
T ss_dssp             CCTT-CCBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC------CCHHHHHHHHHH------
T ss_pred             ccCC-CccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcccccccccchhhHHHHHHHHhc------
Confidence            3222 223446899999999999999999999999999999999999999964321      111112222211      


Q ss_pred             HHHhhhcCCCCCHHHHHHHHHHHHHcCCCCCCCCCCH
Q 005257          593 LDARLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTM  629 (705)
Q Consensus       593 id~~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~  629 (705)
                            ....++......+.+++..||+.||++||++
T Consensus       277 ------~~~~~p~~~s~~~~~li~~lL~~dP~~R~~~  307 (396)
T 4dc2_A          277 ------KQIRIPRSLSVKAASVLKSFLNKDPKERLGC  307 (396)
T ss_dssp             ------CCCCCCTTSCHHHHHHHHHHTCSCTTTSTTC
T ss_pred             ------cccCCCCcCCHHHHHHHHHHhcCCHhHcCCC
Confidence                  1123333445678899999999999999995

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7

Probab=100.00  E-value=7.1e-41  Score=356.36  Aligned_cols=246  Identities=25%  Similarity=0.319  Sum_probs=206.9

Q ss_pred             CCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCC---chhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEEE
Q 005257          364 KGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHEN---DGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLV  440 (705)
Q Consensus       364 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~---~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~lV  440 (705)
                      ++|...+.||+|+||.||++....+++.||+|+++...   ....+.+.+|+.+++.++||||+++++++.. ...+++|
T Consensus         6 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~-~~~~~lv   84 (318)
T 1fot_A            6 QDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQD-AQQIFMI   84 (318)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEEC-SSEEEEE
T ss_pred             HHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEe-CCEEEEE
Confidence            56888999999999999999999999999999986542   2345678899999999999999999998876 6789999


Q ss_pred             EeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecCC
Q 005257          441 YDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGH  520 (705)
Q Consensus       441 ~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~~  520 (705)
                      |||+++|+|.+++....   .+++..+..++.||+.||.|||+   ++|+||||||+|||++.++.+||+|||+++....
T Consensus        85 ~e~~~gg~L~~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~~~  158 (318)
T 1fot_A           85 MDYIEGGELFSLLRKSQ---RFPNPVAKFYAAEVCLALEYLHS---KDIIYRDLKPENILLDKNGHIKITDFGFAKYVPD  158 (318)
T ss_dssp             ECCCCSCBHHHHHHHTS---SCCHHHHHHHHHHHHHHHHHHHT---TTEECCCCCGGGEEECTTSCEEECCCSSCEECSS
T ss_pred             EeCCCCCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHH---CCccccCCChheEEEcCCCCEEEeecCcceecCC
Confidence            99999999999997643   68999999999999999999998   9999999999999999999999999999987543


Q ss_pred             CCcceeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhHHHHHhhhcC
Q 005257          521 GQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRAK  600 (705)
Q Consensus       521 ~~~~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~l~~~  600 (705)
                      .    ....+||+.|+|||++.+..++.++|||||||++|||++|+.||......  + ....+..+.            
T Consensus       159 ~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~--~-~~~~i~~~~------------  219 (318)
T 1fot_A          159 V----TYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTM--K-TYEKILNAE------------  219 (318)
T ss_dssp             C----BCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHH--H-HHHHHHHCC------------
T ss_pred             c----cccccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHH--H-HHHHHHhCC------------
Confidence            2    23357999999999999989999999999999999999999999765421  1 112222111            


Q ss_pred             CCCCHHHHHHHHHHHHHcCCCCCCCCC-----CHHHHHHH
Q 005257          601 GGFDEDEVERVLHLGLLCAYPDPRARP-----TMRQVVKV  635 (705)
Q Consensus       601 ~~~~~~~~~~l~~l~~~Cl~~dP~~RP-----s~~evl~~  635 (705)
                      ..++......+.+++..|++.||++||     ++.+++++
T Consensus       220 ~~~p~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~~i~~h  259 (318)
T 1fot_A          220 LRFPPFFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKNH  259 (318)
T ss_dssp             CCCCTTSCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHTS
T ss_pred             CCCCCCCCHHHHHHHHHHhccCHHHcCCCcCCCHHHHhcC
Confidence            122333345688999999999999999     88888763

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*

Probab=100.00  E-value=4.5e-41  Score=355.66  Aligned_cols=262  Identities=26%  Similarity=0.428  Sum_probs=214.6

Q ss_pred             HhCCCCcceEEeecCceEEEEEEEc-----CCCeEEEEEEeccCC-chhHHHHHHHHHHhccCCCCCcceeeeeeeeccC
Q 005257          362 ATKGFSEENVIGVGGNGKVYKGVLE-----GGGAEIAVKRISHEN-DGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKG  435 (705)
Q Consensus       362 at~~f~~~~~LG~G~fg~Vy~~~~~-----~~~~~vavK~i~~~~-~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~  435 (705)
                      ..++|...+.||+|+||.||+|.+.     .++..||||++.... ....+.+.+|++++++++||||+++++++.. .+
T Consensus        21 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~   99 (314)
T 2ivs_A           21 PRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQ-DG   99 (314)
T ss_dssp             CGGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SS
T ss_pred             chhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCceeeEEEEEec-CC
Confidence            3567888999999999999999983     445889999997653 3456789999999999999999999998876 66


Q ss_pred             ceEEEEeeCCCCChhHHHHhcCC---------------------CCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCC
Q 005257          436 SLMLVYDYMENGSLDKWIFQCDG---------------------SMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDI  494 (705)
Q Consensus       436 ~~~lV~E~~~~gsL~~~L~~~~~---------------------~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDL  494 (705)
                      ..++||||+++|+|.+++.....                     ...+++.+++.++.|++.||.|||+   .+|+||||
T Consensus       100 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~---~~ivH~di  176 (314)
T 2ivs_A          100 PLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAE---MKLVHRDL  176 (314)
T ss_dssp             SCEEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHH---TTEECCCC
T ss_pred             ceEEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHH---CCCccccc
Confidence            88999999999999999986532                     1248999999999999999999998   99999999


Q ss_pred             CCCCeEEccCCCeeeeeeccceecCCCCcc-eeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhh-CCCCCCCC
Q 005257          495 KSSNVLLDKEMNGRLGDFGLARMHGHGQVA-STTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLS-GRRPIEEG  572 (705)
Q Consensus       495 kp~NILld~~~~~kL~DFGla~~~~~~~~~-~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~Ellt-G~~Pf~~~  572 (705)
                      ||+|||++.++.+||+|||+++........ ......+|+.|+|||.+.+..++.++|||||||++|||++ |+.||...
T Consensus       177 kp~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~  256 (314)
T 2ivs_A          177 AARNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGI  256 (314)
T ss_dssp             SGGGEEEETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTC
T ss_pred             chheEEEcCCCCEEEccccccccccccccceeccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence            999999999999999999999876543322 2223467889999999988889999999999999999999 99999765


Q ss_pred             CccHHHHHHHHHHhCchhHHHHHhhhcCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHhccc
Q 005257          573 KPNLVEMVWELMVQGKLLDALDARLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLEGKIE  641 (705)
Q Consensus       573 ~~~~~~~v~~~~~~~~~~~~id~~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~  641 (705)
                      ....   +...+..+..           ...+......+.+++..||+.||++||++.++++.|+..+.
T Consensus       257 ~~~~---~~~~~~~~~~-----------~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~l~~~l~~~~~  311 (314)
T 2ivs_A          257 PPER---LFNLLKTGHR-----------MERPDNCSEEMYRLMLQCWKQEPDKRPVFADISKDLEKMMV  311 (314)
T ss_dssp             CGGG---HHHHHHTTCC-----------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             CHHH---HHHHhhcCCc-----------CCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence            4321   1122222211           12233345678899999999999999999999999987654

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}

Probab=100.00  E-value=7.6e-41  Score=365.20  Aligned_cols=263  Identities=26%  Similarity=0.418  Sum_probs=215.5

Q ss_pred             hCCCCcceEEeecCceEEEEEEEcC-------CCeEEEEEEeccCC-chhHHHHHHHHHHhccC-CCCCcceeeeeeeec
Q 005257          363 TKGFSEENVIGVGGNGKVYKGVLEG-------GGAEIAVKRISHEN-DGGTRAFLAEISSLGRL-KHKSLVGLRGWCKRE  433 (705)
Q Consensus       363 t~~f~~~~~LG~G~fg~Vy~~~~~~-------~~~~vavK~i~~~~-~~~~~~~~~Ei~~l~~l-~Hpniv~l~g~~~~~  433 (705)
                      .++|...+.||+|+||.||+|.+..       .+..||||++.... ....+.+.+|+++++++ +||||++++++|.. 
T Consensus        68 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~-  146 (382)
T 3tt0_A           68 RDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQ-  146 (382)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS-
T ss_pred             hhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhheeeecc-
Confidence            4678889999999999999999753       23689999997653 34457899999999999 99999999999876 


Q ss_pred             cCceEEEEeeCCCCChhHHHHhcCC-------------CCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeE
Q 005257          434 KGSLMLVYDYMENGSLDKWIFQCDG-------------SMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVL  500 (705)
Q Consensus       434 ~~~~~lV~E~~~~gsL~~~L~~~~~-------------~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NIL  500 (705)
                      ++..++||||+++|+|.+++.....             ...+++.+++.++.|++.||.|||+   .+|+||||||+|||
T Consensus       147 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dlkp~NIl  223 (382)
T 3tt0_A          147 DGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLAS---KKCIHRDLAARNVL  223 (382)
T ss_dssp             SSSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEE
T ss_pred             CCceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHh---CCEecCCCCcceEE
Confidence            6788999999999999999986542             1359999999999999999999999   99999999999999


Q ss_pred             EccCCCeeeeeeccceecCCCCc-ceeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhh-CCCCCCCCCccHHH
Q 005257          501 LDKEMNGRLGDFGLARMHGHGQV-ASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLS-GRRPIEEGKPNLVE  578 (705)
Q Consensus       501 ld~~~~~kL~DFGla~~~~~~~~-~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~Ellt-G~~Pf~~~~~~~~~  578 (705)
                      ++.++.+||+|||+++....... .......||+.|+|||++.+..++.++|||||||++|||++ |+.||.....   .
T Consensus       224 l~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p~~~~~~---~  300 (382)
T 3tt0_A          224 VTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPV---E  300 (382)
T ss_dssp             ECTTCCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCH---H
T ss_pred             EcCCCcEEEcccCcccccccccccccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCH---H
Confidence            99999999999999987654332 22233467899999999999999999999999999999999 9999976542   2


Q ss_pred             HHHHHHHhCchhHHHHHhhhcCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHhccccC
Q 005257          579 MVWELMVQGKLLDALDARLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLEGKIEAG  643 (705)
Q Consensus       579 ~v~~~~~~~~~~~~id~~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~~~  643 (705)
                      .+...+..+..           ...+......+.+++..||+.||++|||+.|+++.|+......
T Consensus       301 ~~~~~~~~~~~-----------~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~  354 (382)
T 3tt0_A          301 ELFKLLKEGHR-----------MDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVALT  354 (382)
T ss_dssp             HHHHHHHTTCC-----------CCCCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHS
T ss_pred             HHHHHHHcCCC-----------CCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHH
Confidence            22222222211           1222334467889999999999999999999999999877633

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}

Probab=100.00  E-value=8.8e-41  Score=353.55  Aligned_cols=257  Identities=29%  Similarity=0.475  Sum_probs=203.5

Q ss_pred             CCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCCchhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEEEEee
Q 005257          364 KGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDY  443 (705)
Q Consensus       364 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~lV~E~  443 (705)
                      ++|...+.||+|+||.||+|.+.  ++.||||++...  ...+.+.+|++++++++||||+++++++.   +..++||||
T Consensus         8 ~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~--~~~~~~~~E~~~l~~l~hp~iv~~~~~~~---~~~~lv~e~   80 (307)
T 2eva_A            8 KEIEVEEVVGRGAFGVVCKAKWR--AKDVAIKQIESE--SERKAFIVELRQLSRVNHPNIVKLYGACL---NPVCLVMEY   80 (307)
T ss_dssp             GGEEEEEEEECCSSSEEEEEEET--TEEEEEEECSST--THHHHHHHHHHHHHHCCCTTBCCEEEBCT---TTTEEEEEC
T ss_pred             hHeeeeeEeecCCCceEEEEEEC--CeeEEEEEecCh--hHHHHHHHHHHHHhcCCCCCcCeEEEEEc---CCcEEEEEc
Confidence            46778899999999999999985  688999998643  45678999999999999999999999875   347999999


Q ss_pred             CCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCC-eeeeeeccceecCCCC
Q 005257          444 MENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMN-GRLGDFGLARMHGHGQ  522 (705)
Q Consensus       444 ~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~-~kL~DFGla~~~~~~~  522 (705)
                      +++|+|.+++........+++..++.++.|+++||.|||+...++|+||||||+|||++.++. +||+|||+++..... 
T Consensus        81 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~~~-  159 (307)
T 2eva_A           81 AEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTH-  159 (307)
T ss_dssp             CTTCBHHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCCCC--------
T ss_pred             CCCCCHHHHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEcccccccccccc-
Confidence            999999999986544335789999999999999999999854478999999999999998887 799999999765432 


Q ss_pred             cceeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhHHHHHhhhcCCC
Q 005257          523 VASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRAKGG  602 (705)
Q Consensus       523 ~~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~l~~~~~  602 (705)
                         .....||+.|+|||++.+..++.++|||||||++|||++|+.||...........+... .+..           ..
T Consensus       160 ---~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~-~~~~-----------~~  224 (307)
T 2eva_A          160 ---MTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVH-NGTR-----------PP  224 (307)
T ss_dssp             --------CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCSSHHHHHHHHH-TTCC-----------CC
T ss_pred             ---cccCCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhCccHHHHHHHHh-cCCC-----------CC
Confidence               22346899999999999989999999999999999999999999865433222222211 1111           11


Q ss_pred             CCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHhccccC
Q 005257          603 FDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLEGKIEAG  643 (705)
Q Consensus       603 ~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~~~  643 (705)
                      ........+.+++..||+.||++|||+.++++.|+...+..
T Consensus       225 ~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~  265 (307)
T 2eva_A          225 LIKNLPKPIESLMTRCWSKDPSQRPSMEEIVKIMTHLMRYF  265 (307)
T ss_dssp             CBTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHGGGC
T ss_pred             cccccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHhc
Confidence            22233456889999999999999999999999999876533

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...

Probab=100.00  E-value=7.1e-41  Score=361.16  Aligned_cols=246  Identities=23%  Similarity=0.283  Sum_probs=208.3

Q ss_pred             CCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCC---chhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEEE
Q 005257          364 KGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHEN---DGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLV  440 (705)
Q Consensus       364 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~---~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~lV  440 (705)
                      ++|...+.||+|+||.||+|.+..+++.||||++....   ....+.+.+|+++++.++||||+++++++.. ...+++|
T Consensus        41 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~~lv  119 (350)
T 1rdq_E           41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKD-NSNLYMV  119 (350)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEEC-SSEEEEE
T ss_pred             HHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEc-CCEEEEE
Confidence            57888999999999999999999999999999986542   2345678999999999999999999998876 6789999


Q ss_pred             EeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecCC
Q 005257          441 YDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGH  520 (705)
Q Consensus       441 ~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~~  520 (705)
                      |||+++|+|.+++.+..   .+++.++..++.||+.||.|||+   ++|+||||||+|||++.++.+||+|||+++....
T Consensus       120 ~e~~~gg~L~~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~g~~kL~DFg~a~~~~~  193 (350)
T 1rdq_E          120 MEYVAGGEMFSHLRRIG---RFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG  193 (350)
T ss_dssp             EECCTTCBHHHHHHHHC---CCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCCTTCEECSS
T ss_pred             EcCCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHH---CCcccccCccceEEECCCCCEEEcccccceeccC
Confidence            99999999999997654   58999999999999999999998   9999999999999999999999999999987643


Q ss_pred             CCcceeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhHHHHHhhhcC
Q 005257          521 GQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRAK  600 (705)
Q Consensus       521 ~~~~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~l~~~  600 (705)
                      .    ....+||+.|+|||++.+..++.++|||||||++|||++|+.||.....   ......+..+.            
T Consensus       194 ~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~---~~~~~~i~~~~------------  254 (350)
T 1rdq_E          194 R----TWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP---IQIYEKIVSGK------------  254 (350)
T ss_dssp             C----BCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH---HHHHHHHHHCC------------
T ss_pred             C----cccccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCCCH---HHHHHHHHcCC------------
Confidence            3    2335799999999999998999999999999999999999999986542   12222222222            


Q ss_pred             CCCCHHHHHHHHHHHHHcCCCCCCCCCC-----HHHHHHH
Q 005257          601 GGFDEDEVERVLHLGLLCAYPDPRARPT-----MRQVVKV  635 (705)
Q Consensus       601 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPs-----~~evl~~  635 (705)
                      ..++......+.+++..||+.||.+||+     +.+++++
T Consensus       255 ~~~p~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~ei~~h  294 (350)
T 1rdq_E          255 VRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNH  294 (350)
T ss_dssp             CCCCTTCCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHTS
T ss_pred             CCCCCCCCHHHHHHHHHHhhcCHHhccCCccCCHHHHHhC
Confidence            1223334466889999999999999998     7877763

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}

Probab=100.00  E-value=2.6e-41  Score=359.55  Aligned_cols=265  Identities=23%  Similarity=0.411  Sum_probs=199.5

Q ss_pred             HHHhCCCCcceEEeecCceEEEEEEEcCCCe---EEEEEEeccC--CchhHHHHHHHHHHhccCCCCCcceeeeeeeecc
Q 005257          360 EAATKGFSEENVIGVGGNGKVYKGVLEGGGA---EIAVKRISHE--NDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREK  434 (705)
Q Consensus       360 ~~at~~f~~~~~LG~G~fg~Vy~~~~~~~~~---~vavK~i~~~--~~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~  434 (705)
                      ....++|...+.||+|+||.||+|.+..++.   .||||+++..  .....+.+.+|++++++++||||+++++++....
T Consensus        19 ~i~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~   98 (323)
T 3qup_A           19 LIPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSR   98 (323)
T ss_dssp             BCC---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC-
T ss_pred             ccChhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeeccc
Confidence            3456789999999999999999999876654   8999998765  3455678999999999999999999999987532


Q ss_pred             C-----ceEEEEeeCCCCChhHHHHhcCC---CCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCC
Q 005257          435 G-----SLMLVYDYMENGSLDKWIFQCDG---SMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMN  506 (705)
Q Consensus       435 ~-----~~~lV~E~~~~gsL~~~L~~~~~---~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~  506 (705)
                      .     ..++||||+++|+|.+++.....   ...+++.+++.++.|++.||.|||+   .+|+||||||+|||++.++.
T Consensus        99 ~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~---~~ivH~Dikp~NIli~~~~~  175 (323)
T 3qup_A           99 AKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSS---RNFIHRDLAARNCMLAEDMT  175 (323)
T ss_dssp             ------CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECTTSC
T ss_pred             cccCCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHc---CCcccCCCCcceEEEcCCCC
Confidence            2     23899999999999999965321   2258999999999999999999999   99999999999999999999


Q ss_pred             eeeeeeccceecCCCCcc-eeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhh-CCCCCCCCCccHHHHHHHHH
Q 005257          507 GRLGDFGLARMHGHGQVA-STTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLS-GRRPIEEGKPNLVEMVWELM  584 (705)
Q Consensus       507 ~kL~DFGla~~~~~~~~~-~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~Ellt-G~~Pf~~~~~~~~~~v~~~~  584 (705)
                      +||+|||+++........ ......+++.|+|||.+.+..++.++|||||||++|||++ |+.||.......   ....+
T Consensus       176 ~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~---~~~~~  252 (323)
T 3qup_A          176 VCVADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAE---IYNYL  252 (323)
T ss_dssp             EEECCCCC-----------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG---HHHHH
T ss_pred             EEEeeccccccccccccccccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCccccChHH---HHHHH
Confidence            999999999876543322 2223456889999999999999999999999999999999 999997654321   11111


Q ss_pred             HhCchhHHHHHhhhcCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHhccc
Q 005257          585 VQGKLLDALDARLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLEGKIE  641 (705)
Q Consensus       585 ~~~~~~~~id~~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~  641 (705)
                      ..+..           ...+......+.+++..||+.||++|||+.++++.|++.+.
T Consensus       253 ~~~~~-----------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~l~  298 (323)
T 3qup_A          253 IGGNR-----------LKQPPECMEEVYDLMYQCWSADPKQRPSFTCLRMELENILG  298 (323)
T ss_dssp             HTTCC-----------CCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             hcCCC-----------CCCCCccCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHH
Confidence            11110           12233445678999999999999999999999999998776

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}

Probab=100.00  E-value=1.6e-41  Score=368.54  Aligned_cols=261  Identities=24%  Similarity=0.397  Sum_probs=209.5

Q ss_pred             hCCCCcceEEeecCceEEEEEEE-----cCCCeEEEEEEeccC-CchhHHHHHHHHHHhccCCCCCcceeeeeeeeccCc
Q 005257          363 TKGFSEENVIGVGGNGKVYKGVL-----EGGGAEIAVKRISHE-NDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGS  436 (705)
Q Consensus       363 t~~f~~~~~LG~G~fg~Vy~~~~-----~~~~~~vavK~i~~~-~~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~  436 (705)
                      .++|...+.||+|+||.||+|.+     ..+++.||||+++.. .......+.+|+.++++++||||+++++++.. ...
T Consensus        70 ~~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~-~~~  148 (367)
T 3l9p_A           70 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQ-SLP  148 (367)
T ss_dssp             GGGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSS
T ss_pred             HhHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhCCCCCCCeEEEEEec-CCC
Confidence            35678899999999999999995     346788999999655 34455678999999999999999999999876 667


Q ss_pred             eEEEEeeCCCCChhHHHHhcCC----CCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCC---Ceee
Q 005257          437 LMLVYDYMENGSLDKWIFQCDG----SMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEM---NGRL  509 (705)
Q Consensus       437 ~~lV~E~~~~gsL~~~L~~~~~----~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~---~~kL  509 (705)
                      .++||||+++|+|.+++.....    ...+++.+++.++.||+.||.|||+   ++|+||||||+|||++.++   .+||
T Consensus       149 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~~~~~~~kL  225 (367)
T 3l9p_A          149 RFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEE---NHFIHRDIAARNCLLTCPGPGRVAKI  225 (367)
T ss_dssp             CEEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEESCSSTTCCEEE
T ss_pred             CEEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHh---CCeeCCCCChhhEEEecCCCCceEEE
Confidence            8999999999999999986532    2358999999999999999999999   9999999999999999554   5999


Q ss_pred             eeeccceecCCCC-cceeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhh-CCCCCCCCCccHHHHHHHHHHhC
Q 005257          510 GDFGLARMHGHGQ-VASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLS-GRRPIEEGKPNLVEMVWELMVQG  587 (705)
Q Consensus       510 ~DFGla~~~~~~~-~~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~Ellt-G~~Pf~~~~~~~~~~v~~~~~~~  587 (705)
                      +|||+++...... ........||+.|+|||++.+..++.++|||||||++|||++ |+.||......   .+...+..+
T Consensus       226 ~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~~~~~---~~~~~i~~~  302 (367)
T 3l9p_A          226 GDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQ---EVLEFVTSG  302 (367)
T ss_dssp             CCCHHHHHHHHHSSCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHH---HHHHHHHTT
T ss_pred             CCCccccccccccccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHH---HHHHHHHcC
Confidence            9999997543211 122223467899999999999999999999999999999998 99999765431   122222222


Q ss_pred             chhHHHHHhhhcCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHhccc
Q 005257          588 KLLDALDARLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLEGKIE  641 (705)
Q Consensus       588 ~~~~~id~~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~  641 (705)
                      ..           ...+......+.+++..||+.||++||++.++++.|+...+
T Consensus       303 ~~-----------~~~~~~~~~~l~~li~~~l~~dP~~Rps~~eil~~l~~~~~  345 (367)
T 3l9p_A          303 GR-----------MDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQ  345 (367)
T ss_dssp             CC-----------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             CC-----------CCCCccCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhh
Confidence            11           12233344668899999999999999999999999986544

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*

Probab=100.00  E-value=2.2e-41  Score=361.07  Aligned_cols=257  Identities=25%  Similarity=0.365  Sum_probs=207.2

Q ss_pred             CCCCcceEEeecCceEEEEEEEcCCCeE----EEEEEeccCC-chhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceE
Q 005257          364 KGFSEENVIGVGGNGKVYKGVLEGGGAE----IAVKRISHEN-DGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLM  438 (705)
Q Consensus       364 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~----vavK~i~~~~-~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~  438 (705)
                      ++|...+.||+|+||+||+|.+..+++.    ||+|.+.... ....+.+.+|+.++++++||||++++++|.  ....+
T Consensus        13 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~--~~~~~   90 (325)
T 3kex_A           13 TELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCP--GSSLQ   90 (325)
T ss_dssp             TTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCCCTTBCCEEEEEC--BSSEE
T ss_pred             hHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcCCCCCcCeEEEEEc--CCccE
Confidence            5688899999999999999999877654    7888775442 334456788999999999999999999885  45789


Q ss_pred             EEEeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceec
Q 005257          439 LVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMH  518 (705)
Q Consensus       439 lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~  518 (705)
                      +||||+++|+|.+++....  ..+++..++.++.|++.||.|||+   .+|+||||||+|||++.++.+||+|||+++..
T Consensus        91 ~v~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~  165 (325)
T 3kex_A           91 LVTQYLPLGSLLDHVRQHR--GALGPQLLLNWGVQIAKGMYYLEE---HGMVHRNLAARNVLLKSPSQVQVADFGVADLL  165 (325)
T ss_dssp             EEEECCTTCBSHHHHHSSG--GGSCTTHHHHHHHHHHHHHHHHHH---TTCCCSCCSSTTEEESSSSCEEECSCSGGGGS
T ss_pred             EEEEeCCCCCHHHHHHHcc--ccCCHHHHHHHHHHHHHHHHHHHh---CCCCCCccchheEEECCCCeEEECCCCccccc
Confidence            9999999999999997642  268999999999999999999999   99999999999999999999999999999877


Q ss_pred             CCCCcc-eeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhh-CCCCCCCCCccHHHHHHHHHHhCchhHHHHHh
Q 005257          519 GHGQVA-STTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLS-GRRPIEEGKPNLVEMVWELMVQGKLLDALDAR  596 (705)
Q Consensus       519 ~~~~~~-~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~Ellt-G~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~  596 (705)
                      ...... ......||..|+|||++.+..++.++|||||||++|||++ |+.||.......   +...+..+..       
T Consensus       166 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~---~~~~~~~~~~-------  235 (325)
T 3kex_A          166 PPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAE---VPDLLEKGER-------  235 (325)
T ss_dssp             CCCTTCCC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCTTH---HHHHHHTTCB-------
T ss_pred             CcccccccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccCHHH---HHHHHHcCCC-------
Confidence            544322 2344567889999999998999999999999999999999 999998654321   1122222111       


Q ss_pred             hhcCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHhccc
Q 005257          597 LRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLEGKIE  641 (705)
Q Consensus       597 l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~  641 (705)
                          ...+......+.+++..||+.||++||++.++++.|+....
T Consensus       236 ----~~~~~~~~~~~~~li~~~l~~dp~~Rps~~el~~~l~~~~~  276 (325)
T 3kex_A          236 ----LAQPQICTIDVYMVMVKCWMIDENIRPTFKELANEFTRMAR  276 (325)
T ss_dssp             ----CCCCTTBCTTTTHHHHHHTCSCTTTSCCHHHHHHHHHHHTT
T ss_pred             ----CCCCCcCcHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHh
Confidence                11222234467889999999999999999999999987654

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*

Probab=100.00  E-value=2.1e-41  Score=364.41  Aligned_cols=252  Identities=22%  Similarity=0.375  Sum_probs=207.6

Q ss_pred             HHHhCCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCC---chhHHHHHHHHHHhccC-CCCCcceeeeeeeeccC
Q 005257          360 EAATKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHEN---DGGTRAFLAEISSLGRL-KHKSLVGLRGWCKREKG  435 (705)
Q Consensus       360 ~~at~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~---~~~~~~~~~Ei~~l~~l-~Hpniv~l~g~~~~~~~  435 (705)
                      ....++|...+.||+|+||.||+|.++.+++.||||+++...   ....+.+..|..++..+ +||||+++++++.. ..
T Consensus        13 ~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~-~~   91 (345)
T 1xjd_A           13 KLKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQT-KE   91 (345)
T ss_dssp             ---CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEEC-SS
T ss_pred             CCChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEe-CC
Confidence            345678999999999999999999999999999999997542   33456788899999877 99999999998876 67


Q ss_pred             ceEEEEeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccc
Q 005257          436 SLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLA  515 (705)
Q Consensus       436 ~~~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla  515 (705)
                      .+++||||+++|+|.+++....   .+++.++..++.||+.||.|||+   ++|+||||||+|||++.++.+||+|||++
T Consensus        92 ~~~lv~E~~~gg~L~~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~g~vkL~DFG~a  165 (345)
T 1xjd_A           92 NLFFVMEYLNGGDLMYHIQSCH---KFDLSRATFYAAEIILGLQFLHS---KGIVYRDLKLDNILLDKDGHIKIADFGMC  165 (345)
T ss_dssp             EEEEEEECCTTCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTSCEEECCCTTC
T ss_pred             EEEEEEeCCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHH---CCeEeCCCChhhEEECCCCCEEEeEChhh
Confidence            8999999999999999997643   58999999999999999999999   99999999999999999999999999999


Q ss_pred             eecCCCCcceeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhHHHHH
Q 005257          516 RMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDA  595 (705)
Q Consensus       516 ~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~  595 (705)
                      +....... .....+||+.|+|||++.+..++.++|||||||++|||++|+.||......   .....+..+.       
T Consensus       166 ~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~---~~~~~i~~~~-------  234 (345)
T 1xjd_A          166 KENMLGDA-KTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEE---ELFHSIRMDN-------  234 (345)
T ss_dssp             BCCCCTTC-CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH---HHHHHHHHCC-------
T ss_pred             hhcccCCC-cccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCCCHH---HHHHHHHhCC-------
Confidence            86433222 234468999999999999989999999999999999999999999865431   1222222211       


Q ss_pred             hhhcCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHH-HHHH
Q 005257          596 RLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMR-QVVK  634 (705)
Q Consensus       596 ~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~-evl~  634 (705)
                           ..++......+.+++..||+.||++||++. ++++
T Consensus       235 -----~~~p~~~s~~~~~li~~lL~~dp~~R~~~~~~i~~  269 (345)
T 1xjd_A          235 -----PFYPRWLEKEAKDLLVKLFVREPEKRLGVRGDIRQ  269 (345)
T ss_dssp             -----CCCCTTSCHHHHHHHHHHSCSSGGGSBTTBSCGGG
T ss_pred             -----CCCCcccCHHHHHHHHHHhcCCHhHcCCChHHHHc
Confidence                 222333445688999999999999999997 6653

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=9.7e-41  Score=358.34  Aligned_cols=265  Identities=25%  Similarity=0.401  Sum_probs=213.0

Q ss_pred             HHHhCCCCcceEEeecCceEEEEEEEc-----CCCeEEEEEEeccC-CchhHHHHHHHHHHhccC-CCCCcceeeeeeee
Q 005257          360 EAATKGFSEENVIGVGGNGKVYKGVLE-----GGGAEIAVKRISHE-NDGGTRAFLAEISSLGRL-KHKSLVGLRGWCKR  432 (705)
Q Consensus       360 ~~at~~f~~~~~LG~G~fg~Vy~~~~~-----~~~~~vavK~i~~~-~~~~~~~~~~Ei~~l~~l-~Hpniv~l~g~~~~  432 (705)
                      +...++|...+.||+|+||.||+|.+.     .++..||||++... .....+.+.+|+.++.++ +||||+++++++..
T Consensus        41 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~  120 (344)
T 1rjb_A           41 EFPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTL  120 (344)
T ss_dssp             BCCGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred             ccCHHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEee
Confidence            345578889999999999999999973     35678999999754 234457899999999999 89999999999876


Q ss_pred             ccCceEEEEeeCCCCChhHHHHhcCCC--------------------CcccHHHHHHHHHHHHHHHHHHhcCCCCCeeec
Q 005257          433 EKGSLMLVYDYMENGSLDKWIFQCDGS--------------------MMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHR  492 (705)
Q Consensus       433 ~~~~~~lV~E~~~~gsL~~~L~~~~~~--------------------~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHr  492 (705)
                       .+..++||||+++|+|.+++......                    ..+++.+++.++.||+.||.|||+   .+|+||
T Consensus       121 -~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~---~~ivH~  196 (344)
T 1rjb_A          121 -SGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEF---KSCVHR  196 (344)
T ss_dssp             -SSSCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHH---TTEEET
T ss_pred             -CCccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHh---CCcccC
Confidence             67899999999999999999764321                    248999999999999999999999   999999


Q ss_pred             CCCCCCeEEccCCCeeeeeeccceecCCCCcc-eeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhh-CCCCCC
Q 005257          493 DIKSSNVLLDKEMNGRLGDFGLARMHGHGQVA-STTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLS-GRRPIE  570 (705)
Q Consensus       493 DLkp~NILld~~~~~kL~DFGla~~~~~~~~~-~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~Ellt-G~~Pf~  570 (705)
                      ||||+|||++.++.+||+|||+++........ ......||+.|+|||++.+..++.++|||||||++|||++ |+.||.
T Consensus       197 Dikp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~  276 (344)
T 1rjb_A          197 DLAARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYP  276 (344)
T ss_dssp             TCSGGGEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSST
T ss_pred             CCChhhEEEcCCCcEEeCCCccCcccccCccceeccCccCccCccCHHHhccCCCChhHhHHHHHHHHHHHHcCCCCCcc
Confidence            99999999999999999999999866543322 2333567899999999988899999999999999999998 999997


Q ss_pred             CCCccHHHHHHHHHHhCchhHHHHHhhhcCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHhccc
Q 005257          571 EGKPNLVEMVWELMVQGKLLDALDARLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLEGKIE  641 (705)
Q Consensus       571 ~~~~~~~~~v~~~~~~~~~~~~id~~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~  641 (705)
                      .....  ..+...+..+         ..  ...+......+.+++..||+.||.+|||+.++++.|+....
T Consensus       277 ~~~~~--~~~~~~~~~~---------~~--~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~  334 (344)
T 1rjb_A          277 GIPVD--ANFYKLIQNG---------FK--MDQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLGCQLA  334 (344)
T ss_dssp             TCCCS--HHHHHHHHTT---------CC--CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC-
T ss_pred             cCCcH--HHHHHHHhcC---------CC--CCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHH
Confidence            65432  1112222221         11  12223345678899999999999999999999999998766

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}

Probab=100.00  E-value=7.2e-41  Score=372.10  Aligned_cols=255  Identities=23%  Similarity=0.273  Sum_probs=208.3

Q ss_pred             HhCCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCCc--hhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEE
Q 005257          362 ATKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHEND--GGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLML  439 (705)
Q Consensus       362 at~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~--~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~l  439 (705)
                      ..++|...+.||+|+||.||+|.+..+++.+|+|++.....  ...+.+.+|+++++.++||||+++++++.. ++..++
T Consensus         9 ~~~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~-~~~~~l   87 (444)
T 3soa_A            9 FTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISE-EGHHYL   87 (444)
T ss_dssp             HHHHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEEC-SSEEEE
T ss_pred             ccCCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEE-CCEEEE
Confidence            34578899999999999999999999999999999976532  345678999999999999999999998876 778999


Q ss_pred             EEeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEc---cCCCeeeeeeccce
Q 005257          440 VYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLD---KEMNGRLGDFGLAR  516 (705)
Q Consensus       440 V~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld---~~~~~kL~DFGla~  516 (705)
                      ||||+++|+|.+++....   .+++.++..++.||+.||.|||+   ++|+||||||+|||++   .++.+||+|||+++
T Consensus        88 v~E~~~gg~L~~~i~~~~---~~~e~~~~~i~~qil~aL~~lH~---~givHrDlKp~NIll~~~~~~~~vkL~DFG~a~  161 (444)
T 3soa_A           88 IFDLVTGGELFEDIVARE---YYSEADASHCIQQILEAVLHCHQ---MGVVHRNLKPENLLLASKLKGAAVKLADFGLAI  161 (444)
T ss_dssp             EECCCBCCBHHHHHHHCS---CCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCSSTTEEESBSSTTCCEEECCCSSCB
T ss_pred             EEEeCCCCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHH---CCccccCCCHHHEEEeccCCCCcEEEccCceeE
Confidence            999999999999997643   69999999999999999999999   9999999999999998   45789999999998


Q ss_pred             ecCCCCcceeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhHHHHHh
Q 005257          517 MHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDAR  596 (705)
Q Consensus       517 ~~~~~~~~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~  596 (705)
                      ....... ......||+.|+|||++.+..++.++||||+||++|||++|+.||.....   ......+..+....     
T Consensus       162 ~~~~~~~-~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~~~---~~~~~~i~~~~~~~-----  232 (444)
T 3soa_A          162 EVEGEQQ-AWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQ---HRLYQQIKAGAYDF-----  232 (444)
T ss_dssp             CCCTTCC-BCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCSSH---HHHHHHHHHTCCCC-----
T ss_pred             EecCCCc-eeecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCccH---HHHHHHHHhCCCCC-----
Confidence            7654332 22346799999999999998999999999999999999999999976542   12222232222110     


Q ss_pred             hhcCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 005257          597 LRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKV  635 (705)
Q Consensus       597 l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  635 (705)
                         ...........+.+++..||+.||++|||+.|++++
T Consensus       233 ---~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~e~L~h  268 (444)
T 3soa_A          233 ---PSPEWDTVTPEAKDLINKMLTINPSKRITAAEALKH  268 (444)
T ss_dssp             ---CTTTTTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred             ---CccccccCCHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence               000111234568899999999999999999999874

>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A

Probab=100.00  E-value=4.1e-41  Score=364.82  Aligned_cols=269  Identities=19%  Similarity=0.207  Sum_probs=209.9

Q ss_pred             HhCCCCcceEEeecCceEEEEEEEcCC-----CeEEEEEEeccCCchhH-----------HHHHHHHHHhccCCCCCcce
Q 005257          362 ATKGFSEENVIGVGGNGKVYKGVLEGG-----GAEIAVKRISHENDGGT-----------RAFLAEISSLGRLKHKSLVG  425 (705)
Q Consensus       362 at~~f~~~~~LG~G~fg~Vy~~~~~~~-----~~~vavK~i~~~~~~~~-----------~~~~~Ei~~l~~l~Hpniv~  425 (705)
                      ..++|...+.||+|+||.||+|.+..+     ++.||||++........           ..+..|+..+..++||||++
T Consensus        33 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~  112 (364)
T 3op5_A           33 AAAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPK  112 (364)
T ss_dssp             TCCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCC
T ss_pred             CCCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCe
Confidence            456899999999999999999998764     47899999876542211           23455677788889999999


Q ss_pred             eeeeeeecc---CceEEEEeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEc
Q 005257          426 LRGWCKREK---GSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLD  502 (705)
Q Consensus       426 l~g~~~~~~---~~~~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld  502 (705)
                      +++++....   ...++||||+ +++|.+++.....  .+++.+++.++.||+.||.|||+   .+|+||||||+|||++
T Consensus       113 ~~~~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~~~~--~l~~~~~~~i~~qi~~~l~~lH~---~~iiHrDlkp~Nill~  186 (364)
T 3op5_A          113 YWGSGLHDKNGKSYRFMIMDRF-GSDLQKIYEANAK--RFSRKTVLQLSLRILDILEYIHE---HEYVHGDIKASNLLLN  186 (364)
T ss_dssp             EEEEEEEEETTEEEEEEEEECE-EEEHHHHHHHTTS--CCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEEE
T ss_pred             EEeeeeeccCCcceEEEEEeCC-CCCHHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHH---CCeEEecCCHHHEEEe
Confidence            999987532   3579999999 9999999976432  69999999999999999999999   9999999999999999


Q ss_pred             --cCCCeeeeeeccceecCCCCcc------eeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhhCCCCCCCCCc
Q 005257          503 --KEMNGRLGDFGLARMHGHGQVA------STTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKP  574 (705)
Q Consensus       503 --~~~~~kL~DFGla~~~~~~~~~------~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~  574 (705)
                        .++.+||+|||+++........      ......||+.|+|||++.+..++.++|||||||++|||++|+.||.....
T Consensus       187 ~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf~~~~~  266 (364)
T 3op5_A          187 YKNPDQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDNLK  266 (364)
T ss_dssp             SSCTTCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTT
T ss_pred             cCCCCeEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCCCCcccccc
Confidence              8899999999999876533211      11334699999999999998999999999999999999999999985332


Q ss_pred             c--HHHHHHHHHHhCchhHHHHHhhhcCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHhcccc
Q 005257          575 N--LVEMVWELMVQGKLLDALDARLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLEGKIEA  642 (705)
Q Consensus       575 ~--~~~~v~~~~~~~~~~~~id~~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~~  642 (705)
                      .  ....... .....+.+.++..+.. .    ..+..+.+++..||+.||++||++.++++.|+..+..
T Consensus       267 ~~~~~~~~~~-~~~~~~~~~~~~~~~~-~----~~~~~~~~li~~cl~~~p~~RP~~~~l~~~l~~~~~~  330 (364)
T 3op5_A          267 DPKYVRDSKI-RYRENIASLMDKCFPA-A----NAPGEIAKYMETVKLLDYTEKPLYENLRDILLQGLKA  330 (364)
T ss_dssp             CHHHHHHHHH-HHHHCHHHHHHHHSCT-T----CCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHH-HhhhhHHHHHHHhccc-c----cCHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHH
Confidence            2  1111111 1122333344433321 1    2235688899999999999999999999999987663

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...

Probab=100.00  E-value=4.6e-41  Score=355.90  Aligned_cols=271  Identities=24%  Similarity=0.362  Sum_probs=219.8

Q ss_pred             CHHHHHHHhCCCCcceEEeecCceEEEEEEEc-----CCCeEEEEEEeccCCc-hhHHHHHHHHHHhccC-CCCCcceee
Q 005257          355 TYQEIEAATKGFSEENVIGVGGNGKVYKGVLE-----GGGAEIAVKRISHEND-GGTRAFLAEISSLGRL-KHKSLVGLR  427 (705)
Q Consensus       355 ~~~el~~at~~f~~~~~LG~G~fg~Vy~~~~~-----~~~~~vavK~i~~~~~-~~~~~~~~Ei~~l~~l-~Hpniv~l~  427 (705)
                      ...+.....++|...+.||+|+||.||+|.+.     .+++.||||++..... ...+.+.+|++++.++ +||||++++
T Consensus        18 ~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~   97 (316)
T 2xir_A           18 DASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLL   97 (316)
T ss_dssp             CHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEE
T ss_pred             cccceecchhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCeeeEE
Confidence            34455566788999999999999999999853     4568999999976543 3456789999999999 799999999


Q ss_pred             eeeeeccCceEEEEeeCCCCChhHHHHhcCC-------------CCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCC
Q 005257          428 GWCKREKGSLMLVYDYMENGSLDKWIFQCDG-------------SMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDI  494 (705)
Q Consensus       428 g~~~~~~~~~~lV~E~~~~gsL~~~L~~~~~-------------~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDL  494 (705)
                      +++...+...++||||+++|+|.+++.....             ...+++.+++.++.|++.||.|||+   .+|+||||
T Consensus        98 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~---~~i~H~di  174 (316)
T 2xir_A           98 GACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLAS---RKCIHRDL  174 (316)
T ss_dssp             EEECCTTSCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHH---TTCCCSCC
T ss_pred             EEEecCCCceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHh---CCcccccC
Confidence            9988766678999999999999999976542             1238999999999999999999999   99999999


Q ss_pred             CCCCeEEccCCCeeeeeeccceecCCCCc-ceeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhh-CCCCCCCC
Q 005257          495 KSSNVLLDKEMNGRLGDFGLARMHGHGQV-ASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLS-GRRPIEEG  572 (705)
Q Consensus       495 kp~NILld~~~~~kL~DFGla~~~~~~~~-~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~Ellt-G~~Pf~~~  572 (705)
                      ||+|||++.++.+||+|||+++....... .......||+.|+|||++.+..++.++|||||||++|||++ |+.||...
T Consensus       175 kp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~  254 (316)
T 2xir_A          175 AARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGV  254 (316)
T ss_dssp             SGGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTC
T ss_pred             ccceEEECCCCCEEECCCccccccccCccceeccCCCcceeecCchhhccccccchhHHHHHHHHHHHHHhCCCCCCccc
Confidence            99999999999999999999987654332 22334578999999999999899999999999999999998 99999765


Q ss_pred             CccHHHHHHHHHHhCchhHHHHHhhhcCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHhccc
Q 005257          573 KPNLVEMVWELMVQGKLLDALDARLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLEGKIE  641 (705)
Q Consensus       573 ~~~~~~~v~~~~~~~~~~~~id~~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~  641 (705)
                      ...  +.+...+..+..           ...+......+.+++..||+.||.+|||+.++++.|+..++
T Consensus       255 ~~~--~~~~~~~~~~~~-----------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~  310 (316)
T 2xir_A          255 KID--EEFCRRLKEGTR-----------MRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ  310 (316)
T ss_dssp             CCS--HHHHHHHHHTCC-----------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             chh--HHHHHHhccCcc-----------CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHh
Confidence            432  112222222211           11222334568899999999999999999999999997765

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A

Probab=100.00  E-value=8.2e-41  Score=360.80  Aligned_cols=255  Identities=26%  Similarity=0.354  Sum_probs=206.7

Q ss_pred             CCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccC-----CchhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceE
Q 005257          364 KGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHE-----NDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLM  438 (705)
Q Consensus       364 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~-----~~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~  438 (705)
                      ++|...+.||+|+||.||+|.+..+++.||||++...     .....+.+.+|+.+++.++||||+++++++.. ++.++
T Consensus        24 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~-~~~~~  102 (351)
T 3c0i_A           24 DVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSS-DGMLY  102 (351)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEE-TTEEE
T ss_pred             cceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEe-CCEEE
Confidence            4688899999999999999999999999999998643     12245779999999999999999999998876 67899


Q ss_pred             EEEeeCCCCChhHHHHhcC-CCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCC---eeeeeecc
Q 005257          439 LVYDYMENGSLDKWIFQCD-GSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMN---GRLGDFGL  514 (705)
Q Consensus       439 lV~E~~~~gsL~~~L~~~~-~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~---~kL~DFGl  514 (705)
                      +||||+++|+|.+++.+.. ....+++..+..++.||+.||.|||+   ++|+||||||+|||++.++.   +||+|||+
T Consensus       103 lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~---~~ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~  179 (351)
T 3c0i_A          103 MVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHD---NNIIHRDVKPHCVLLASKENSAPVKLGGFGV  179 (351)
T ss_dssp             EEEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECSSSTTCCEEECCCTT
T ss_pred             EEEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHH---CCceeccCChHHeEEecCCCCCcEEEecCcc
Confidence            9999999999998886532 23358999999999999999999998   99999999999999987655   99999999


Q ss_pred             ceecCCCCcceeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhHHHH
Q 005257          515 ARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALD  594 (705)
Q Consensus       515 a~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~~id  594 (705)
                      ++....... .....+||+.|+|||++.+..++.++|||||||++|||++|+.||.....    .....+..+....  .
T Consensus       180 a~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~----~~~~~i~~~~~~~--~  252 (351)
T 3c0i_A          180 AIQLGESGL-VAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKE----RLFEGIIKGKYKM--N  252 (351)
T ss_dssp             CEECCTTSC-BCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCSSHH----HHHHHHHHTCCCC--C
T ss_pred             eeEecCCCe-eecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCCcHH----HHHHHHHcCCCCC--C
Confidence            987755332 22345799999999999998999999999999999999999999976422    2222222222110  0


Q ss_pred             HhhhcCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 005257          595 ARLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKV  635 (705)
Q Consensus       595 ~~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  635 (705)
                      +...  .    .....+.+++..||+.||++|||+.|++++
T Consensus       253 ~~~~--~----~~s~~~~~li~~~L~~dP~~R~s~~e~l~h  287 (351)
T 3c0i_A          253 PRQW--S----HISESAKDLVRRMLMLDPAERITVYEALNH  287 (351)
T ss_dssp             HHHH--T----TSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred             cccc--c----cCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence            0000  1    123568899999999999999999999873

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}

Probab=100.00  E-value=9.5e-41  Score=351.23  Aligned_cols=252  Identities=23%  Similarity=0.326  Sum_probs=199.9

Q ss_pred             hCCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCCc--------------------------hhHHHHHHHHHHhc
Q 005257          363 TKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHEND--------------------------GGTRAFLAEISSLG  416 (705)
Q Consensus       363 t~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~--------------------------~~~~~~~~Ei~~l~  416 (705)
                      .++|...+.||+|+||.||+|.+..+++.||||++.....                          ...+.+.+|+++++
T Consensus        12 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~   91 (298)
T 2zv2_A           12 LNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILK   91 (298)
T ss_dssp             ETTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHH
T ss_pred             ecceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHH
Confidence            3578899999999999999999999999999999865421                          12356889999999


Q ss_pred             cCCCCCcceeeeeeeec-cCceEEEEeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCC
Q 005257          417 RLKHKSLVGLRGWCKRE-KGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIK  495 (705)
Q Consensus       417 ~l~Hpniv~l~g~~~~~-~~~~~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLk  495 (705)
                      +++||||+++++++... ...+++||||+++++|.+++.    ...+++.++..++.|++.||.|||+   .+|+|||||
T Consensus        92 ~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~----~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~Dlk  164 (298)
T 2zv2_A           92 KLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPT----LKPLSEDQARFYFQDLIKGIEYLHY---QKIIHRDIK  164 (298)
T ss_dssp             TCCCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSC----SSCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCC
T ss_pred             hCCCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhh----cCCCCHHHHHHHHHHHHHHHHHHHH---CCeeccCCC
Confidence            99999999999998752 457899999999999988653    2369999999999999999999999   999999999


Q ss_pred             CCCeEEccCCCeeeeeeccceecCCCCcceeeeeeccccCCCccccccCC---CCccccEEEEehhHHHHhhCCCCCCCC
Q 005257          496 SSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGR---ASTQTDVFGFGILILEVLSGRRPIEEG  572 (705)
Q Consensus       496 p~NILld~~~~~kL~DFGla~~~~~~~~~~~~~~~gt~~y~APE~~~~~~---~s~ksDVwS~Gvvl~ElltG~~Pf~~~  572 (705)
                      |+|||++.++.+||+|||+++....... ......||+.|+|||++.+..   ++.++|||||||++|||++|+.||...
T Consensus       165 p~Nil~~~~~~~kl~Dfg~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~  243 (298)
T 2zv2_A          165 PSNLLVGEDGHIKIADFGVSNEFKGSDA-LLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDE  243 (298)
T ss_dssp             GGGEEECTTSCEEECCCTTCEECSSSSC-EECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred             HHHEEECCCCCEEEecCCCccccccccc-cccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCc
Confidence            9999999999999999999987654332 223457999999999997755   378899999999999999999999764


Q ss_pred             CccHHHHHHHHHHhCchhHHHHHhhhcCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 005257          573 KPNLVEMVWELMVQGKLLDALDARLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKV  635 (705)
Q Consensus       573 ~~~~~~~v~~~~~~~~~~~~id~~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  635 (705)
                      ...   .....+.....        .  ..........+.+++..||+.||++|||+.|++++
T Consensus       244 ~~~---~~~~~~~~~~~--------~--~~~~~~~~~~l~~li~~~l~~dp~~R~s~~e~l~h  293 (298)
T 2zv2_A          244 RIM---CLHSKIKSQAL--------E--FPDQPDIAEDLKDLITRMLDKNPESRIVVPEIKLH  293 (298)
T ss_dssp             SHH---HHHHHHHHCCC--------C--CCSSSCCCHHHHHHHHHHTCSCTTTSCCHHHHTTC
T ss_pred             cHH---HHHHHHhcccC--------C--CCCccccCHHHHHHHHHHhhcChhhCCCHHHHhcC
Confidence            321   11111111111        0  00111234568899999999999999999998763

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}

Probab=100.00  E-value=9.6e-41  Score=364.04  Aligned_cols=250  Identities=24%  Similarity=0.330  Sum_probs=207.1

Q ss_pred             CCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccC---CchhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEEE
Q 005257          364 KGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHE---NDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLV  440 (705)
Q Consensus       364 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~---~~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~lV  440 (705)
                      ++|...+.||+|+||.||++.+..+++.||+|++...   .....+.+.+|+.+++.++||||+++++++.. ...+++|
T Consensus        15 ~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~-~~~~~lv   93 (384)
T 4fr4_A           15 DHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQD-EEDMFMV   93 (384)
T ss_dssp             GGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEEC-SSEEEEE
T ss_pred             HHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEe-CCEEEEE
Confidence            5688899999999999999999999999999998653   23345778999999999999999999998876 6789999


Q ss_pred             EeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecCC
Q 005257          441 YDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGH  520 (705)
Q Consensus       441 ~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~~  520 (705)
                      |||+++|+|..++....   .+++..+..++.||+.||.|||+   .+|+||||||+|||++.++.+||+|||+++....
T Consensus        94 ~e~~~gg~L~~~l~~~~---~l~~~~~~~~~~qi~~aL~~LH~---~givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~  167 (384)
T 4fr4_A           94 VDLLLGGDLRYHLQQNV---HFKEETVKLFICELVMALDYLQN---QRIIHRDMKPDNILLDEHGHVHITDFNIAAMLPR  167 (384)
T ss_dssp             ECCCTTEEHHHHHHTTC---CCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCCTTCEECCT
T ss_pred             EecCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHH---CCceeccCcHHHeEECCCCCEEEeccceeeeccC
Confidence            99999999999997533   69999999999999999999999   9999999999999999999999999999987654


Q ss_pred             CCcceeeeeeccccCCCcccccc---CCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhHHHHHhh
Q 005257          521 GQVASTTRVVGTVGYLAPEVFSS---GRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDARL  597 (705)
Q Consensus       521 ~~~~~~~~~~gt~~y~APE~~~~---~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~l  597 (705)
                      ..  .....+||+.|+|||++..   ..++.++|||||||++|||++|+.||..............+..           
T Consensus       168 ~~--~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~~~~~~-----------  234 (384)
T 4fr4_A          168 ET--QITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIVHTFET-----------  234 (384)
T ss_dssp             TC--CBCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTSCHHHHHHHHHH-----------
T ss_pred             CC--ceeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCCccHHHHHHHHhh-----------
Confidence            33  2344689999999999864   4589999999999999999999999975433222222121111           


Q ss_pred             hcCCCCCHHHHHHHHHHHHHcCCCCCCCCCC-HHHHHH
Q 005257          598 RAKGGFDEDEVERVLHLGLLCAYPDPRARPT-MRQVVK  634 (705)
Q Consensus       598 ~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs-~~evl~  634 (705)
                       ....++......+.+++..||+.||.+||+ +.++.+
T Consensus       235 -~~~~~p~~~s~~~~~li~~lL~~dP~~R~s~~~~l~~  271 (384)
T 4fr4_A          235 -TVVTYPSAWSQEMVSLLKKLLEPNPDQRFSQLSDVQN  271 (384)
T ss_dssp             -CCCCCCTTSCHHHHHHHHHHSCSSGGGSCCSHHHHHT
T ss_pred             -cccCCCCcCCHHHHHHHHHHhcCCHhHhcccHHHHHc
Confidence             112233344567889999999999999998 666654

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A

Probab=100.00  E-value=1.3e-40  Score=349.13  Aligned_cols=263  Identities=24%  Similarity=0.343  Sum_probs=203.3

Q ss_pred             CCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCC--chhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEEEE
Q 005257          364 KGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHEN--DGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVY  441 (705)
Q Consensus       364 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~--~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~lV~  441 (705)
                      ++|+..+.||+|+||+||+|.+..+++.||||++....  ....+.+.+|+.++++++||||+++++++.. ++..++||
T Consensus         2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-~~~~~lv~   80 (292)
T 3o0g_A            2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHS-DKKLTLVF   80 (292)
T ss_dssp             CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEE-TTEEEEEE
T ss_pred             CCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEe-CCEEEEEE
Confidence            46888999999999999999999999999999997553  3345778999999999999999999999876 67899999


Q ss_pred             eeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecCCC
Q 005257          442 DYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHG  521 (705)
Q Consensus       442 E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~~~  521 (705)
                      ||+++ +|.+++.....  .+++.++..++.|++.||.|||+   .+|+||||||+|||++.++.+||+|||+++.....
T Consensus        81 e~~~~-~l~~~~~~~~~--~l~~~~~~~~~~ql~~~l~~lH~---~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~  154 (292)
T 3o0g_A           81 EFCDQ-DLKKYFDSCNG--DLDPEIVKSFLFQLLKGLGFCHS---RNVLHRDLKPQNLLINRNGELKLANFGLARAFGIP  154 (292)
T ss_dssp             ECCSE-EHHHHHHHTTT--CCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCCTTCEECCSC
T ss_pred             ecCCC-CHHHHHHhCCC--CCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEcCCCCEEEeecccceecCCc
Confidence            99975 66666655332  69999999999999999999999   99999999999999999999999999999876533


Q ss_pred             CcceeeeeeccccCCCccccccCC-CCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHH-hCchhHHHHHhhhc
Q 005257          522 QVASTTRVVGTVGYLAPEVFSSGR-ASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMV-QGKLLDALDARLRA  599 (705)
Q Consensus       522 ~~~~~~~~~gt~~y~APE~~~~~~-~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~-~~~~~~~id~~l~~  599 (705)
                      .. ......||+.|+|||++.+.. ++.++|||||||++|||++|..|+...... .+....... .+.......+....
T Consensus       155 ~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~~~-~~~~~~i~~~~~~~~~~~~~~~~~  232 (292)
T 3o0g_A          155 VR-CYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDV-DDQLKRIFRLLGTPTEEQWPSMTK  232 (292)
T ss_dssp             CS-CCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSH-HHHHHHHHHHHCCCCTTTCTTGGG
T ss_pred             cc-cccCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCCCH-HHHHHHHHHHhCCCChhhhhhhcc
Confidence            22 223357899999999997765 899999999999999999998886554321 111111111 01000000000000


Q ss_pred             ---------------CCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 005257          600 ---------------KGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKV  635 (705)
Q Consensus       600 ---------------~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  635 (705)
                                     ...........+.+++..|++.||++|||+.|++++
T Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h  283 (292)
T 3o0g_A          233 LPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQH  283 (292)
T ss_dssp             STTCCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred             cccccccccccCCcchhhcccccChHHHHHHHHHhccChhhCCCHHHHhcC
Confidence                           000111234567899999999999999999999874

>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A

Probab=100.00  E-value=1.3e-40  Score=349.07  Aligned_cols=264  Identities=19%  Similarity=0.272  Sum_probs=211.7

Q ss_pred             hCCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCCchhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEEEEe
Q 005257          363 TKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYD  442 (705)
Q Consensus       363 t~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~lV~E  442 (705)
                      .++|...+.||+|+||.||+|.+..+++.||||++.....  .+.+.+|+.++..++|+++++.+.++.......++|||
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e   85 (296)
T 3uzp_A            8 GNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK--HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVME   85 (296)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCSS--CCHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEE
T ss_pred             ccEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCcc--hhHHHHHHHHHHHhhcCCCCCccccccCCCCceEEEEE
Confidence            4678999999999999999999988999999999865432  34688999999999999988888888776788899999


Q ss_pred             eCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEE---ccCCCeeeeeeccceecC
Q 005257          443 YMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLL---DKEMNGRLGDFGLARMHG  519 (705)
Q Consensus       443 ~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILl---d~~~~~kL~DFGla~~~~  519 (705)
                      |+ +++|.+++.....  .+++.+++.++.|++.||.|||+   ++|+||||||+|||+   +.++.+||+|||+++...
T Consensus        86 ~~-~~~L~~~~~~~~~--~~~~~~~~~i~~qi~~~l~~lH~---~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~  159 (296)
T 3uzp_A           86 LL-GPSLEDLFNFCSR--KFSLKTVLLLADQMISRIEYIHS---KNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYR  159 (296)
T ss_dssp             CC-CCBHHHHHHHTTT--CCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEECCGGGTTCEEECCCTTCEECB
T ss_pred             ec-CCCHHHHHHhhcc--CCCHHHHHHHHHHHHHHHHHHHh---CCeeeCCCCHHHeEEecCCCCCeEEEeeCCCccccc
Confidence            99 8999999975433  69999999999999999999999   999999999999999   588999999999998766


Q ss_pred             CCCcc------eeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhHHH
Q 005257          520 HGQVA------STTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDAL  593 (705)
Q Consensus       520 ~~~~~------~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~~i  593 (705)
                      .....      ......||+.|+|||++.+..++.++|||||||++|||++|+.||..............+..+......
T Consensus       160 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~  239 (296)
T 3uzp_A          160 DARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPI  239 (296)
T ss_dssp             CTTTCCBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHSCH
T ss_pred             ccccccccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCchhhhhhhhhhcccccCCch
Confidence            54321      123457999999999999999999999999999999999999999763321000001111110000000


Q ss_pred             HHhhhcCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHhccc
Q 005257          594 DARLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLEGKIE  641 (705)
Q Consensus       594 d~~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~  641 (705)
                       +.+.  ..    ....+.+++..||+.||++||++.++++.|+....
T Consensus       240 -~~~~--~~----~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~  280 (296)
T 3uzp_A          240 -EVLC--KG----YPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFH  280 (296)
T ss_dssp             -HHHT--TT----SCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHH
T ss_pred             -HHHH--hh----CCHHHHHHHHHHHhcCcCcCCCHHHHHHHHHHHHH
Confidence             0000  11    23568899999999999999999999999998765

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*

Probab=100.00  E-value=2.4e-41  Score=353.64  Aligned_cols=253  Identities=22%  Similarity=0.351  Sum_probs=206.1

Q ss_pred             hCCCCcceEEeecCceEEEEEEEcCCC-------eEEEEEEeccCCchhHHHHHHHHHHhccCCCCCcceeeeeeeeccC
Q 005257          363 TKGFSEENVIGVGGNGKVYKGVLEGGG-------AEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKG  435 (705)
Q Consensus       363 t~~f~~~~~LG~G~fg~Vy~~~~~~~~-------~~vavK~i~~~~~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~  435 (705)
                      .++|...+.||+|+||.||+|.+..++       ..||+|++........+.+.+|+.++++++||||+++++++.. ++
T Consensus         7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-~~   85 (289)
T 4fvq_A            7 NEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCVC-GD   85 (289)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGGGGHHHHHHHHHHHHTSCCTTBCCEEEEECC-TT
T ss_pred             hhHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhcccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEe-CC
Confidence            356788999999999999999988766       5799999977666677889999999999999999999999876 66


Q ss_pred             ceEEEEeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCC--------e
Q 005257          436 SLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMN--------G  507 (705)
Q Consensus       436 ~~~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~--------~  507 (705)
                      ..++||||+++|+|.+++.....  .+++..++.++.|++.||.|||+   ++|+||||||+|||++.++.        +
T Consensus        86 ~~~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dlkp~NIll~~~~~~~~~~~~~~  160 (289)
T 4fvq_A           86 ENILVQEFVKFGSLDTYLKKNKN--CINILWKLEVAKQLAAAMHFLEE---NTLIHGNVCAKNILLIREEDRKTGNPPFI  160 (289)
T ss_dssp             CCEEEEECCTTCBHHHHHHHTGG--GCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEEEECCBGGGTBCCEE
T ss_pred             CCEEEEECCCCCCHHHHHHhCCC--CCCHHHHHHHHHHHHHHHHHHhh---CCeECCCcCcceEEEecCCccccccccee
Confidence            78999999999999999976432  48999999999999999999999   99999999999999998887        9


Q ss_pred             eeeeeccceecCCCCcceeeeeeccccCCCcccccc-CCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHh
Q 005257          508 RLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSS-GRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQ  586 (705)
Q Consensus       508 kL~DFGla~~~~~~~~~~~~~~~gt~~y~APE~~~~-~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~  586 (705)
                      ||+|||++......     ....||+.|+|||++.+ ..++.++|||||||++|||++|..|+....... .. ..... 
T Consensus       161 kl~Dfg~~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~-~~-~~~~~-  232 (289)
T 4fvq_A          161 KLSDPGISITVLPK-----DILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQ-RK-LQFYE-  232 (289)
T ss_dssp             EECCCCSCTTTSCH-----HHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHH-HH-HHHHH-
T ss_pred             eeccCcccccccCc-----cccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCccccchH-HH-HHHhh-
Confidence            99999998754322     22457899999999987 678999999999999999999655544332211 10 01111 


Q ss_pred             CchhHHHHHhhhcCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHhccc
Q 005257          587 GKLLDALDARLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLEGKIE  641 (705)
Q Consensus       587 ~~~~~~id~~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~  641 (705)
                              ..    ...+......+.+++..||+.||++|||+.++++.|+....
T Consensus       233 --------~~----~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~l~~  275 (289)
T 4fvq_A          233 --------DR----HQLPAPKAAELANLINNCMDYEPDHRPSFRAIIRDLNSLFT  275 (289)
T ss_dssp             --------TT----CCCCCCSSCTTHHHHHHHSCSSGGGSCCHHHHHHHHHTCC-
T ss_pred             --------cc----CCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhcC
Confidence                    01    11222224567889999999999999999999999997765

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A

Probab=100.00  E-value=2.7e-41  Score=352.40  Aligned_cols=258  Identities=26%  Similarity=0.420  Sum_probs=208.7

Q ss_pred             HhCCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCCchhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEEEE
Q 005257          362 ATKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVY  441 (705)
Q Consensus       362 at~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~lV~  441 (705)
                      ..++|...+.||+|+||.||+|.+. ++..||||++.... ...+++.+|++++.+++||||+++++++.. .+..++||
T Consensus        22 ~~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~lv~   98 (283)
T 3gen_A           22 DPKDLTFLKELGTGQFGVVKYGKWR-GQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQLYGVCTK-QRPIFIIT   98 (283)
T ss_dssp             CGGGEEEEEECC---CEEEEEEEET-TTEEEEEEEECTTS-BCHHHHHHHHHHHHTCCCTTBCCEEEEECS-SSSEEEEE
T ss_pred             CHHHHHhHhhcCCCCCceEEEEEEc-CCCeEEEEEecCCC-CCHHHHHHHHHHHhcCCCCCEeeEEEEEec-CCCeEEEE
Confidence            3557888999999999999999887 46789999997543 335779999999999999999999999876 67889999


Q ss_pred             eeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecCCC
Q 005257          442 DYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHG  521 (705)
Q Consensus       442 E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~~~  521 (705)
                      ||+++++|.+++.....  .+++.+++.++.|++.||.|||+   .+|+||||||+|||++.++.+||+|||+++.....
T Consensus        99 e~~~~~~L~~~l~~~~~--~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~  173 (283)
T 3gen_A           99 EYMANGCLLNYLREMRH--RFQTQQLLEMCKDVCEAMEYLES---KQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDD  173 (283)
T ss_dssp             CCCTTCBHHHHHHCGGG--CCCHHHHHHHHHHHHHHHHHHHH---TTCCCSSCSGGGEEECTTSCEEECSTTGGGGBCCH
T ss_pred             eccCCCcHHHHHHHhcc--CCCHHHHHHHHHHHHHHHHHHHH---CCccCCCCccceEEEcCCCCEEEcccccccccccc
Confidence            99999999999976332  59999999999999999999998   99999999999999999999999999999866543


Q ss_pred             CcceeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhh-CCCCCCCCCccHHHHHHHHHHhCchhHHHHHhhhcC
Q 005257          522 QVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLS-GRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRAK  600 (705)
Q Consensus       522 ~~~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~Ellt-G~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~l~~~  600 (705)
                      .........+|+.|+|||++.+..++.++||||||+++|||++ |+.||......   .....+..+         ..  
T Consensus       174 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~~---~~~~~~~~~---------~~--  239 (283)
T 3gen_A          174 EYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNS---ETAEHIAQG---------LR--  239 (283)
T ss_dssp             HHHSTTSTTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSCHH---HHHHHHHTT---------CC--
T ss_pred             ccccccCCccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccccChh---HHHHHHhcc---------cC--
Confidence            3222233456788999999998899999999999999999998 99999765431   111112211         11  


Q ss_pred             CCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHhccc
Q 005257          601 GGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLEGKIE  641 (705)
Q Consensus       601 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~  641 (705)
                      ...+....+.+.+++..||+.||++|||+.++++.|+...+
T Consensus       240 ~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~~~~  280 (283)
T 3gen_A          240 LYRPHLASEKVYTIMYSCWHEKADERPTFKILLSNILDVMD  280 (283)
T ss_dssp             CCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             CCCCCcCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHhh
Confidence            11222234578899999999999999999999999987654

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...

Probab=100.00  E-value=3.6e-41  Score=376.05  Aligned_cols=258  Identities=26%  Similarity=0.438  Sum_probs=206.4

Q ss_pred             HhCCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCCchhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEEEE
Q 005257          362 ATKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVY  441 (705)
Q Consensus       362 at~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~lV~  441 (705)
                      ..++|...+.||+|+||.||+|.+.. +..||||+++... ...++|.+|+++|++++||||+++++++..  +..++||
T Consensus       182 ~~~~~~~~~~lG~G~fg~Vy~~~~~~-~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~--~~~~iv~  257 (452)
T 1fmk_A          182 PRESLRLEVKLGQGCFGEVWMGTWNG-TTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE--EPIYIVT  257 (452)
T ss_dssp             CGGGEEEEEEEEECSSCEEEEEEETT-TEEEEEEECCTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS--SSCEEEE
T ss_pred             ChhHceeeeeecCCCCeEEEEEEECC-CceEEEEEeccCC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEcC--CceEEEe
Confidence            34567888999999999999999975 5679999997543 345789999999999999999999998864  5789999


Q ss_pred             eeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecCCC
Q 005257          442 DYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHG  521 (705)
Q Consensus       442 E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~~~  521 (705)
                      ||+++|+|.+++..... ..+++.+++.++.|++.||.|||+   ++|+||||||+|||++.++.+||+|||+++.....
T Consensus       258 e~~~~gsL~~~l~~~~~-~~~~~~~~~~i~~qi~~~l~~LH~---~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~  333 (452)
T 1fmk_A          258 EYMSKGSLLDFLKGETG-KYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDN  333 (452)
T ss_dssp             CCCTTCBHHHHHSHHHH-TTCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECGGGCEEECCCCTTC-----
T ss_pred             hhhcCCCHHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHh---CCeeCCCCChhhEEECCCCCEEECCCccceecCCC
Confidence            99999999999965322 258999999999999999999999   99999999999999999999999999999876544


Q ss_pred             CcceeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhh-CCCCCCCCCccHHHHHHHHHHhCchhHHHHHhhhcC
Q 005257          522 QVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLS-GRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRAK  600 (705)
Q Consensus       522 ~~~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~Ellt-G~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~l~~~  600 (705)
                      .........++..|+|||++.+..++.++|||||||++|||++ |+.||......   .+...+..+         .+  
T Consensus       334 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~---~~~~~i~~~---------~~--  399 (452)
T 1fmk_A          334 EYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNR---EVLDQVERG---------YR--  399 (452)
T ss_dssp             ---------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHH---HHHHHHHTT---------CC--
T ss_pred             ceecccCCcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCCCHH---HHHHHHHcC---------CC--
Confidence            3333334467889999999998899999999999999999999 99999765421   122222222         11  


Q ss_pred             CCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHhccc
Q 005257          601 GGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLEGKIE  641 (705)
Q Consensus       601 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~  641 (705)
                      ...+..+.+.+.+++..||+.||++|||+.++++.|+....
T Consensus       400 ~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~~l~~~L~~~~~  440 (452)
T 1fmk_A          400 MPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFT  440 (452)
T ss_dssp             CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTTTS
T ss_pred             CCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhc
Confidence            12233455678899999999999999999999999997765

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B

Probab=100.00  E-value=6.3e-41  Score=363.24  Aligned_cols=253  Identities=23%  Similarity=0.321  Sum_probs=208.0

Q ss_pred             hCCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCC--chhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEEE
Q 005257          363 TKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHEN--DGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLV  440 (705)
Q Consensus       363 t~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~--~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~lV  440 (705)
                      .++|...+.||+|+||.||+|.+..+++.||+|++....  ....+.+.+|+.++++++||||+++++++.. .+..++|
T Consensus        28 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~-~~~~~lv  106 (362)
T 2bdw_A           28 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQE-ESFHYLV  106 (362)
T ss_dssp             HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEC-SSEEEEE
T ss_pred             ccCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEe-CCEEEEE
Confidence            457889999999999999999999999999999997553  3345678999999999999999999998876 6788999


Q ss_pred             EeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCC---Ceeeeeecccee
Q 005257          441 YDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEM---NGRLGDFGLARM  517 (705)
Q Consensus       441 ~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~---~~kL~DFGla~~  517 (705)
                      |||+++|+|.+++...   ..+++.++..++.||+.||.|||+   .+|+||||||+|||++.++   .+||+|||+++.
T Consensus       107 ~e~~~gg~L~~~l~~~---~~~~~~~~~~~~~qi~~al~~lH~---~~ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~~  180 (362)
T 2bdw_A          107 FDLVTGGELFEDIVAR---EFYSEADASHCIQQILESIAYCHS---NGIVHRNLKPENLLLASKAKGAAVKLADFGLAIE  180 (362)
T ss_dssp             ECCCCSCBHHHHHTTC---SCCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCSGGGEEESCSSTTCCEEECCCTTCBC
T ss_pred             EecCCCCCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHH---CCeEeccCchHHEEEecCCCCCCEEEeecCcceE
Confidence            9999999999998653   268999999999999999999999   9999999999999998654   599999999987


Q ss_pred             cCCCCcceeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhHHHHHhh
Q 005257          518 HGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDARL  597 (705)
Q Consensus       518 ~~~~~~~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~l  597 (705)
                      ......  .....||+.|+|||++.+..++.++|||||||++|||++|+.||.....   ......+..+....      
T Consensus       181 ~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~---~~~~~~i~~~~~~~------  249 (362)
T 2bdw_A          181 VNDSEA--WHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQ---HRLYAQIKAGAYDY------  249 (362)
T ss_dssp             CTTCCS--CCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH---HHHHHHHHHTCCCC------
T ss_pred             ecCCcc--cccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCH---HHHHHHHHhCCCCC------
Confidence            654322  2335799999999999998999999999999999999999999976543   12222222222110      


Q ss_pred             hcCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 005257          598 RAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKV  635 (705)
Q Consensus       598 ~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  635 (705)
                        ...........+.+++..||+.||++||++.|++++
T Consensus       250 --~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h  285 (362)
T 2bdw_A          250 --PSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALKV  285 (362)
T ss_dssp             --CTTGGGGSCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred             --CcccccCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence              000001234568899999999999999999999875

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*

Probab=100.00  E-value=1.7e-41  Score=373.20  Aligned_cols=262  Identities=21%  Similarity=0.249  Sum_probs=212.5

Q ss_pred             HHHHHHHhCCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccC---CchhHHHHHHHHHHhccCCCCCcceeeeeeee
Q 005257          356 YQEIEAATKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHE---NDGGTRAFLAEISSLGRLKHKSLVGLRGWCKR  432 (705)
Q Consensus       356 ~~el~~at~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~---~~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~  432 (705)
                      +.++....++|...++||+|+||+||+|.++.+++.||+|+++..   .....+.+.+|+.++..++||||+++++++.+
T Consensus        61 ~~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~  140 (410)
T 3v8s_A           61 IRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQD  140 (410)
T ss_dssp             HHHHSCCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEEC
T ss_pred             HHhcccCccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEE
Confidence            445666778999999999999999999999999999999998653   12233457899999999999999999998876


Q ss_pred             ccCceEEEEeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeee
Q 005257          433 EKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDF  512 (705)
Q Consensus       433 ~~~~~~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DF  512 (705)
                       ...+++||||+++|+|.+++...    .+++..+..++.||+.||.|||+   ++|+||||||+|||++.++.+||+||
T Consensus       141 -~~~~~lV~E~~~gg~L~~~l~~~----~~~e~~~~~~~~qi~~aL~~LH~---~givHrDLKp~NILl~~~g~ikL~DF  212 (410)
T 3v8s_A          141 -DRYLYMVMEYMPGGDLVNLMSNY----DVPEKWARFYTAEVVLALDAIHS---MGFIHRDVKPDNMLLDKSGHLKLADF  212 (410)
T ss_dssp             -SSEEEEEECCCTTEEHHHHHHHC----CCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCC
T ss_pred             -CCEEEEEEeCCCCCcHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHH---CCeEeccCCHHHeeECCCCCEEEecc
Confidence             67899999999999999999653    48999999999999999999999   99999999999999999999999999


Q ss_pred             ccceecCCCCcceeeeeeccccCCCccccccCC----CCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCc
Q 005257          513 GLARMHGHGQVASTTRVVGTVGYLAPEVFSSGR----ASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGK  588 (705)
Q Consensus       513 Gla~~~~~~~~~~~~~~~gt~~y~APE~~~~~~----~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~  588 (705)
                      |+++.............+||+.|+|||++.+..    ++.++|||||||++|||++|+.||......  +. ...+..+.
T Consensus       213 G~a~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~--~~-~~~i~~~~  289 (410)
T 3v8s_A          213 GTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLV--GT-YSKIMNHK  289 (410)
T ss_dssp             TTCEECCTTSEEECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCSSHH--HH-HHHHHTHH
T ss_pred             ceeEeeccCCcccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCCChh--hH-HHHHHhcc
Confidence            999877655444444578999999999997654    789999999999999999999999865431  11 11111110


Q ss_pred             hhHHHHHhhhcCCCCCHHHHHHHHHHHHHcCCCCCCC--CCCHHHHHHHH
Q 005257          589 LLDALDARLRAKGGFDEDEVERVLHLGLLCAYPDPRA--RPTMRQVVKVL  636 (705)
Q Consensus       589 ~~~~id~~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~--RPs~~evl~~L  636 (705)
                            ..+.  ..........+.+++..||+.+|.+  ||++.|++++-
T Consensus       290 ------~~~~--~p~~~~~s~~~~~li~~lL~~~~~rlgR~~~~ei~~Hp  331 (410)
T 3v8s_A          290 ------NSLT--FPDDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRHL  331 (410)
T ss_dssp             ------HHCC--CCTTCCCCHHHHHHHHHHSSCGGGCTTSSCHHHHHTSG
T ss_pred             ------cccc--CCCcccccHHHHHHHHHHccChhhhCCCCCHHHHhcCc
Confidence                  0011  0111123456788999999999988  99999999853

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*

Probab=100.00  E-value=9.7e-41  Score=360.37  Aligned_cols=251  Identities=24%  Similarity=0.363  Sum_probs=207.6

Q ss_pred             HhCCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccC---CchhHHHHHHHHHHhccC-CCCCcceeeeeeeeccCce
Q 005257          362 ATKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHE---NDGGTRAFLAEISSLGRL-KHKSLVGLRGWCKREKGSL  437 (705)
Q Consensus       362 at~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~---~~~~~~~~~~Ei~~l~~l-~Hpniv~l~g~~~~~~~~~  437 (705)
                      ..++|...+.||+|+||.||+|....+++.||||+++..   .....+.+.+|..++..+ +||||+++++++.. .+.+
T Consensus        18 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~-~~~~   96 (353)
T 2i0e_A           18 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQT-MDRL   96 (353)
T ss_dssp             -CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEEC-SSEE
T ss_pred             chHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEc-CCEE
Confidence            346789999999999999999999988999999998754   223456788999999988 89999999998876 6789


Q ss_pred             EEEEeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeecccee
Q 005257          438 MLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARM  517 (705)
Q Consensus       438 ~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~  517 (705)
                      ++||||+++|+|.+++.+..   .+++.+++.++.||+.||.|||+   ++|+||||||+|||++.++.+||+|||+++.
T Consensus        97 ~lv~E~~~gg~L~~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH~---~givHrDlkp~NIll~~~g~vkL~DFG~a~~  170 (353)
T 2i0e_A           97 YFVMEYVNGGDLMYHIQQVG---RFKEPHAVFYAAEIAIGLFFLQS---KGIIYRDLKLDNVMLDSEGHIKIADFGMCKE  170 (353)
T ss_dssp             EEEEECCCSCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTSCEEECCCTTCBC
T ss_pred             EEEEeCCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHH---CCEEeccCCHHHEEEcCCCcEEEEeCCcccc
Confidence            99999999999999997643   58999999999999999999999   9999999999999999999999999999986


Q ss_pred             cCCCCcceeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhHHHHHhh
Q 005257          518 HGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDARL  597 (705)
Q Consensus       518 ~~~~~~~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~l  597 (705)
                      ...... .....+||+.|+|||++.+..++.++|||||||++|||++|+.||......   .+.+.+..+.         
T Consensus       171 ~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~---~~~~~i~~~~---------  237 (353)
T 2i0e_A          171 NIWDGV-TTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDED---ELFQSIMEHN---------  237 (353)
T ss_dssp             CCCTTC-CBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHH---HHHHHHHHCC---------
T ss_pred             cccCCc-ccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCCCHH---HHHHHHHhCC---------
Confidence            433222 233468999999999999999999999999999999999999999765421   1222222211         


Q ss_pred             hcCCCCCHHHHHHHHHHHHHcCCCCCCCCCC-----HHHHHHH
Q 005257          598 RAKGGFDEDEVERVLHLGLLCAYPDPRARPT-----MRQVVKV  635 (705)
Q Consensus       598 ~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs-----~~evl~~  635 (705)
                         ..++......+.+++..||+.||++||+     +++++++
T Consensus       238 ---~~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~i~~h  277 (353)
T 2i0e_A          238 ---VAYPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEH  277 (353)
T ss_dssp             ---CCCCTTSCHHHHHHHHHHTCSCTTSCTTCSTTHHHHHHTS
T ss_pred             ---CCCCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcC
Confidence               2233344567889999999999999995     5777653

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7

Probab=100.00  E-value=1.3e-40  Score=363.67  Aligned_cols=254  Identities=21%  Similarity=0.280  Sum_probs=210.3

Q ss_pred             hCCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCCchhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEEEEe
Q 005257          363 TKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYD  442 (705)
Q Consensus       363 t~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~lV~E  442 (705)
                      .++|...+.||+|+||.||+|.+..+++.||+|++..........+.+|+.+++.++||||+++++++.. ...+++|||
T Consensus        50 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~-~~~~~lv~E  128 (387)
T 1kob_A           50 YDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFED-KYEMVLILE  128 (387)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEEC-SSEEEEEEE
T ss_pred             ccceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccchhhHHHHHHHHHHHHhCCCcCCCeEEEEEEe-CCEEEEEEE
Confidence            4679999999999999999999999999999999987665566789999999999999999999998876 678999999


Q ss_pred             eCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEcc--CCCeeeeeeccceecCC
Q 005257          443 YMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDK--EMNGRLGDFGLARMHGH  520 (705)
Q Consensus       443 ~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~--~~~~kL~DFGla~~~~~  520 (705)
                      |+++|+|.+++....  ..+++.+++.++.||+.||.|||+   .+|+||||||+|||++.  ++.+||+|||+++....
T Consensus       129 ~~~gg~L~~~l~~~~--~~l~~~~~~~i~~qi~~aL~~LH~---~givHrDlkp~NIll~~~~~~~vkL~DFG~a~~~~~  203 (387)
T 1kob_A          129 FLSGGELFDRIAAED--YKMSEAEVINYMRQACEGLKHMHE---HSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNP  203 (387)
T ss_dssp             CCCCCBHHHHTTCTT--CCBCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEESSTTCCCEEECCCTTCEECCT
T ss_pred             cCCCCcHHHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHHh---CCeeecccchHHeEEecCCCCceEEEecccceecCC
Confidence            999999999986533  258999999999999999999998   99999999999999974  47799999999987755


Q ss_pred             CCcceeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhHHHHHhhhcC
Q 005257          521 GQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRAK  600 (705)
Q Consensus       521 ~~~~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~l~~~  600 (705)
                      ...  .....||+.|+|||++.+..++.++|||||||++|||++|+.||......  +. ...+.....        ...
T Consensus       204 ~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~--~~-~~~i~~~~~--------~~~  270 (387)
T 1kob_A          204 DEI--VKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDL--ET-LQNVKRCDW--------EFD  270 (387)
T ss_dssp             TSC--EEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHH--HH-HHHHHHCCC--------CCC
T ss_pred             Ccc--eeeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCCCHH--HH-HHHHHhCCC--------CCC
Confidence            432  23457999999999999989999999999999999999999999865421  11 111111110        000


Q ss_pred             CCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 005257          601 GGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKV  635 (705)
Q Consensus       601 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  635 (705)
                      ..........+.+++..||+.||++|||+.|++++
T Consensus       271 ~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~h  305 (387)
T 1kob_A          271 EDAFSSVSPEAKDFIKNLLQKEPRKRLTVHDALEH  305 (387)
T ss_dssp             SSTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred             ccccccCCHHHHHHHHHHcCCChhHCcCHHHHhhC
Confidence            11112234568899999999999999999999985

>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A

Probab=100.00  E-value=9.7e-41  Score=349.78  Aligned_cols=265  Identities=18%  Similarity=0.271  Sum_probs=208.5

Q ss_pred             HhCCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCCchhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEEEE
Q 005257          362 ATKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVY  441 (705)
Q Consensus       362 at~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~lV~  441 (705)
                      ..++|...+.||+|+||.||+|.+..+++.||||++.....  .+.+.+|++++..++|++++..+.++.......++||
T Consensus         7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~   84 (296)
T 4hgt_A            7 VGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK--HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVM   84 (296)
T ss_dssp             ----CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC-----CCCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEE
T ss_pred             cCCceEEeeeecCCCCeEEEEEEEcCCCceEEEEeeccccc--chHHHHHHHHHHHhcCCCCCCeeeeecCCCCceEEEE
Confidence            35789999999999999999999988999999998754432  2457889999999999999998888877778889999


Q ss_pred             eeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEE---ccCCCeeeeeeccceec
Q 005257          442 DYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLL---DKEMNGRLGDFGLARMH  518 (705)
Q Consensus       442 E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILl---d~~~~~kL~DFGla~~~  518 (705)
                      ||+ +++|.+++.....  .+++.+++.++.|++.||.|||+   .+|+||||||+|||+   +.++.+||+|||+++..
T Consensus        85 e~~-~~~L~~~~~~~~~--~~~~~~~~~i~~qi~~~l~~LH~---~~ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~~~  158 (296)
T 4hgt_A           85 ELL-GPSLEDLFNFCSR--KFSLKTVLLLADQMISRIEYIHS---KNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKY  158 (296)
T ss_dssp             ECC-CCBHHHHHHHTTS--CCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECCGGGTTCEEECCCTTCEEC
T ss_pred             Ecc-CCCHHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHeeeeccCCCCeEEEecCccceec
Confidence            999 9999999975433  59999999999999999999999   999999999999999   78899999999999876


Q ss_pred             CCCCcc------eeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhHH
Q 005257          519 GHGQVA------STTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDA  592 (705)
Q Consensus       519 ~~~~~~------~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~~  592 (705)
                      ......      ......||+.|+|||++.+..++.++|||||||++|||++|+.||.......................
T Consensus       159 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~  238 (296)
T 4hgt_A          159 RDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTP  238 (296)
T ss_dssp             BCTTTCCBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHSC
T ss_pred             cCcccCccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccchhhhhhhhhhhhcccccch
Confidence            554321      22345789999999999999999999999999999999999999976432110000011100000000


Q ss_pred             HHHhhhcCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHhccc
Q 005257          593 LDARLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLEGKIE  641 (705)
Q Consensus       593 id~~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~  641 (705)
                      . ..+.  ..    ....+.+++..||+.||++||++.++++.|+...+
T Consensus       239 ~-~~~~--~~----~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~~~~  280 (296)
T 4hgt_A          239 I-EVLC--KG----YPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFH  280 (296)
T ss_dssp             H-HHHT--TT----SCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHH
T ss_pred             h-hhhh--cc----CCHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHH
Confidence            0 0000  11    23568899999999999999999999999998765

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*

Probab=100.00  E-value=4.9e-41  Score=358.37  Aligned_cols=254  Identities=25%  Similarity=0.320  Sum_probs=203.7

Q ss_pred             hCCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCCc-hhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEEEE
Q 005257          363 TKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHEND-GGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVY  441 (705)
Q Consensus       363 t~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~-~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~lV~  441 (705)
                      .++|+..+.||+|+||+||+|.+..+++.||||++..... ...+.+.+|+.+++.++||||+++++++.. ++..++||
T Consensus         6 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~-~~~~~lv~   84 (323)
T 3tki_A            6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRRE-GNIQYLFL   84 (323)
T ss_dssp             TTCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHHCCCTTBCCEEEEEEC-SSEEEEEE
T ss_pred             hhhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHHHHHhCCCCCCCeEEEEEec-CCeEEEEE
Confidence            3578899999999999999999999999999999865432 234668899999999999999999998876 67889999


Q ss_pred             eeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecCCC
Q 005257          442 DYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHG  521 (705)
Q Consensus       442 E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~~~  521 (705)
                      ||+++|+|.+++...   ..+++.+++.++.|++.||.|||+   .+|+||||||+|||++.++.+||+|||+++.....
T Consensus        85 e~~~~~~L~~~l~~~---~~~~~~~~~~i~~qi~~aL~~LH~---~givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~  158 (323)
T 3tki_A           85 EYCSGGELFDRIEPD---IGMPEPDAQRFFHQLMAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYN  158 (323)
T ss_dssp             ECCTTEEGGGGSBTT---TBCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTCCEEECCCTTCEECEET
T ss_pred             EcCCCCcHHHHHhhc---CCCCHHHHHHHHHHHHHHHHHHHH---CCccccccchHHEEEeCCCCEEEEEeeccceeccC
Confidence            999999999998543   269999999999999999999998   99999999999999999999999999999866433


Q ss_pred             Cc-ceeeeeeccccCCCccccccCCC-CccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhHHHHHhhhc
Q 005257          522 QV-ASTTRVVGTVGYLAPEVFSSGRA-STQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRA  599 (705)
Q Consensus       522 ~~-~~~~~~~gt~~y~APE~~~~~~~-s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~l~~  599 (705)
                      .. .......||+.|+|||++.+..+ +.++|||||||++|||++|+.||..........  ..+......         
T Consensus       159 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~--~~~~~~~~~---------  227 (323)
T 3tki_A          159 NRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEY--SDWKEKKTY---------  227 (323)
T ss_dssp             TEECCBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTTSHHH--HHHHTTCTT---------
T ss_pred             CcccccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchHHHHH--HHHhccccc---------
Confidence            22 22234679999999999987665 789999999999999999999997644321111  111111000         


Q ss_pred             CCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 005257          600 KGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKV  635 (705)
Q Consensus       600 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  635 (705)
                       ..........+.+++..||+.||++|||+.|+++.
T Consensus       228 -~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eil~h  262 (323)
T 3tki_A          228 -LNPWKKIDSAPLALLHKILVENPSARITIPDIKKD  262 (323)
T ss_dssp             -STTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred             -CCccccCCHHHHHHHHHHccCChhhCcCHHHHhhC
Confidence             00112234567889999999999999999999875

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*

Probab=100.00  E-value=1.5e-40  Score=357.87  Aligned_cols=246  Identities=24%  Similarity=0.350  Sum_probs=202.4

Q ss_pred             CCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccC---CchhHHHHHHHHHHhccC-CCCCcceeeeeeeeccCceEE
Q 005257          364 KGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHE---NDGGTRAFLAEISSLGRL-KHKSLVGLRGWCKREKGSLML  439 (705)
Q Consensus       364 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~---~~~~~~~~~~Ei~~l~~l-~Hpniv~l~g~~~~~~~~~~l  439 (705)
                      ++|...+.||+|+||.||+|.++.+++.||||++...   .....+.+.+|..++.++ +||||+++++++.. ...+++
T Consensus         9 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~-~~~~~l   87 (345)
T 3a8x_A            9 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQT-ESRLFF   87 (345)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEEC-SSEEEE
T ss_pred             hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEe-CCEEEE
Confidence            4688899999999999999999999999999999754   233456688999999988 89999999998876 678999


Q ss_pred             EEeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecC
Q 005257          440 VYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHG  519 (705)
Q Consensus       440 V~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~  519 (705)
                      ||||+++|+|.+++.+..   .+++..++.++.||+.||.|||+   ++|+||||||+|||++.++.+||+|||+++...
T Consensus        88 v~e~~~gg~L~~~l~~~~---~l~~~~~~~~~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~g~~kL~DFG~a~~~~  161 (345)
T 3a8x_A           88 VIEYVNGGDLMFHMQRQR---KLPEEHARFYSAEISLALNYLHE---RGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGL  161 (345)
T ss_dssp             EECCCCSCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTSCEEECCGGGCBCSC
T ss_pred             EEeCCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHH---CCceecCCCHHHEEECCCCCEEEEecccccccc
Confidence            999999999999997643   68999999999999999999999   999999999999999999999999999998643


Q ss_pred             CCCcceeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhhCCCCCCCCCcc------HHHHHHHHHHhCchhHHH
Q 005257          520 HGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPN------LVEMVWELMVQGKLLDAL  593 (705)
Q Consensus       520 ~~~~~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~------~~~~v~~~~~~~~~~~~i  593 (705)
                      .... .....+||+.|+|||++.+..++.++|||||||++|||++|+.||......      ..+...+.+..+      
T Consensus       162 ~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~i~~~------  234 (345)
T 3a8x_A          162 RPGD-TTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEK------  234 (345)
T ss_dssp             CTTC-CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC-------CHHHHHHHHHHC------
T ss_pred             CCCC-cccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCCcccccccccccHHHHHHHHHcC------
Confidence            2221 233468999999999999989999999999999999999999999642210      111111111111      


Q ss_pred             HHhhhcCCCCCHHHHHHHHHHHHHcCCCCCCCCCCH
Q 005257          594 DARLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTM  629 (705)
Q Consensus       594 d~~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~  629 (705)
                            ...++......+.+++..||+.||++||++
T Consensus       235 ------~~~~p~~~s~~~~~li~~lL~~dP~~R~~~  264 (345)
T 3a8x_A          235 ------QIRIPRSLSVKAASVLKSFLNKDPKERLGC  264 (345)
T ss_dssp             ------CCCCCTTSCHHHHHHHHHHTCSSTTTSTTC
T ss_pred             ------CCCCCCCCCHHHHHHHHHHhcCCHhHCCCC
Confidence                  122333445678899999999999999995

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}

Probab=100.00  E-value=3.6e-41  Score=361.32  Aligned_cols=247  Identities=24%  Similarity=0.366  Sum_probs=204.0

Q ss_pred             CCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCC---chhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEEE
Q 005257          364 KGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHEN---DGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLV  440 (705)
Q Consensus       364 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~---~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~lV  440 (705)
                      ++|...+.||+|+||.||+|.+..+++.||||++....   ....+.+.+|+.+++.++||||+++++++.. ....++|
T Consensus         9 ~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~-~~~~~lv   87 (336)
T 3h4j_B            9 GPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITT-PTDIVMV   87 (336)
T ss_dssp             TTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEEC-SSEEEEE
T ss_pred             CCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEe-CCEEEEE
Confidence            57889999999999999999999999999999986431   2234578999999999999999999999876 6789999


Q ss_pred             EeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecCC
Q 005257          441 YDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGH  520 (705)
Q Consensus       441 ~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~~  520 (705)
                      |||+ +|+|.+++....   .+++.++..++.|++.||.|||+   .+|+||||||+|||+++++++||+|||+++....
T Consensus        88 ~E~~-~g~l~~~l~~~~---~l~~~~~~~i~~qi~~aL~~LH~---~givH~Dlkp~NIll~~~~~~kl~DFG~s~~~~~  160 (336)
T 3h4j_B           88 IEYA-GGELFDYIVEKK---RMTEDEGRRFFQQIICAIEYCHR---HKIVHRDLKPENLLLDDNLNVKIADFGLSNIMTD  160 (336)
T ss_dssp             ECCC-CEEHHHHHHHHC---SCCHHHHHHHHHHHHHHHHHHHH---HTCCCCCCSTTTEEECTTCCEEECCSSCTBTTTT
T ss_pred             EECC-CCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHH---CCeEecCCchhhEEEcCCCCEEEEEeccceeccC
Confidence            9999 789999887643   69999999999999999999998   8999999999999999999999999999987654


Q ss_pred             CCcceeeeeeccccCCCccccccCCC-CccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhHHHHHhhhc
Q 005257          521 GQVASTTRVVGTVGYLAPEVFSSGRA-STQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRA  599 (705)
Q Consensus       521 ~~~~~~~~~~gt~~y~APE~~~~~~~-s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~l~~  599 (705)
                      ....  ...+||+.|+|||++.+..+ +.++|||||||++|||++|+.||.......            +...+.   ..
T Consensus       161 ~~~~--~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~------------~~~~i~---~~  223 (336)
T 3h4j_B          161 GNFL--KTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPN------------LFKKVN---SC  223 (336)
T ss_dssp             SBTT--CCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSSTT------------CBCCCC---SS
T ss_pred             Cccc--ccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHHH------------HHHHHH---cC
Confidence            4322  33579999999999988765 789999999999999999999997643210            000000   00


Q ss_pred             CCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 005257          600 KGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKV  635 (705)
Q Consensus       600 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  635 (705)
                      ....+......+.+++..||+.||.+|||+.|++++
T Consensus       224 ~~~~p~~~s~~~~~li~~~L~~dP~~Rpt~~eil~h  259 (336)
T 3h4j_B          224 VYVMPDFLSPGAQSLIRRMIVADPMQRITIQEIRRD  259 (336)
T ss_dssp             CCCCCTTSCHHHHHHHHTTSCSSGGGSCCHHHHTTC
T ss_pred             CCCCcccCCHHHHHHHHHHcCCChhHCcCHHHHHhC
Confidence            011222334567899999999999999999999874

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=1.2e-40  Score=362.53  Aligned_cols=259  Identities=27%  Similarity=0.411  Sum_probs=199.5

Q ss_pred             CCCcceEEeecCceEEEEEEEcCC---CeEEEEEEeccC-CchhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEEE
Q 005257          365 GFSEENVIGVGGNGKVYKGVLEGG---GAEIAVKRISHE-NDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLV  440 (705)
Q Consensus       365 ~f~~~~~LG~G~fg~Vy~~~~~~~---~~~vavK~i~~~-~~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~lV  440 (705)
                      .|...+.||+|+||+||+|.+..+   ...||||.++.. .....+.+.+|+.++++++||||++++++|...++..++|
T Consensus        90 ~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~lv  169 (373)
T 3c1x_A           90 IVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVV  169 (373)
T ss_dssp             EEEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCCEEE
T ss_pred             eeecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCeEEE
Confidence            356678999999999999997543   246899998654 3355678999999999999999999999987656788999


Q ss_pred             EeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecCC
Q 005257          441 YDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGH  520 (705)
Q Consensus       441 ~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~~  520 (705)
                      |||+++|+|.+++.....  .+++.+++.++.|++.||.|||+   .+|+||||||+|||++.++.+||+|||+++....
T Consensus       170 ~e~~~~g~L~~~l~~~~~--~~~~~~~~~i~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~  244 (373)
T 3c1x_A          170 LPYMKHGDLRNFIRNETH--NPTVKDLIGFGLQVAKGMKFLAS---KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYD  244 (373)
T ss_dssp             EECCTTCBHHHHHHCTTC--CCBHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTCCEEECCC--------
T ss_pred             EECCCCCCHHHHHhhccc--CCCHHHHHHHHHHHHHHHHHHHH---CCEecCccchheEEECCCCCEEEeeccccccccc
Confidence            999999999999975432  58999999999999999999999   9999999999999999999999999999986543


Q ss_pred             CCcc---eeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhh-CCCCCCCCCccHHHHHHHHHHhCchhHHHHHh
Q 005257          521 GQVA---STTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLS-GRRPIEEGKPNLVEMVWELMVQGKLLDALDAR  596 (705)
Q Consensus       521 ~~~~---~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~Ellt-G~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~  596 (705)
                      ....   ......+|+.|+|||++.+..++.++|||||||++|||++ |..||........   ...+..+..       
T Consensus       245 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~~~~---~~~~~~~~~-------  314 (373)
T 3c1x_A          245 KEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDI---TVYLLQGRR-------  314 (373)
T ss_dssp             -------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCSSCH---HHHHHTTCC-------
T ss_pred             cccccccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCHHHH---HHHHHcCCC-------
Confidence            3221   1233467889999999999999999999999999999999 6777765432111   111122211       


Q ss_pred             hhcCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHhcccc
Q 005257          597 LRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLEGKIEA  642 (705)
Q Consensus       597 l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~~  642 (705)
                          ...+......+.+++..||+.||++||++.|+++.|+.....
T Consensus       315 ----~~~p~~~~~~l~~li~~cl~~dp~~RPs~~ell~~L~~i~~~  356 (373)
T 3c1x_A          315 ----LLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFST  356 (373)
T ss_dssp             ----CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred             ----CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHh
Confidence                111223445788999999999999999999999999977663

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}

Probab=100.00  E-value=1.4e-40  Score=361.89  Aligned_cols=249  Identities=24%  Similarity=0.315  Sum_probs=200.1

Q ss_pred             cceEEeecCceEEEEEEEcCCCeEEEEEEeccCCchhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEEEEeeCCCC
Q 005257          368 EENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENG  447 (705)
Q Consensus       368 ~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~lV~E~~~~g  447 (705)
                      ..+.||+|+||.||+|....+++.||+|+++.......+.+.+|++++++++||||+++++++.. .+.+++||||+++|
T Consensus        93 ~~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~-~~~~~lv~E~~~~~  171 (373)
T 2x4f_A           93 KTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFES-KNDIVLVMEYVDGG  171 (373)
T ss_dssp             EEEECC-----CEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEC-SSEEEEEEECCTTC
T ss_pred             cceEEecCcCEEEEEEEEcCCCcEEEEEEEcccccccHHHHHHHHHHHHhCCCCCCCeEEEEEEE-CCEEEEEEeCCCCC
Confidence            35789999999999999999999999999987666677889999999999999999999999876 67899999999999


Q ss_pred             ChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEE--ccCCCeeeeeeccceecCCCCcce
Q 005257          448 SLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLL--DKEMNGRLGDFGLARMHGHGQVAS  525 (705)
Q Consensus       448 sL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILl--d~~~~~kL~DFGla~~~~~~~~~~  525 (705)
                      +|.+++....  ..+++.+++.++.||+.||.|||+   .+|+||||||+|||+  +.++.+||+|||+++.......  
T Consensus       172 ~L~~~l~~~~--~~l~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~~~--  244 (373)
T 2x4f_A          172 ELFDRIIDES--YNLTELDTILFMKQICEGIRHMHQ---MYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREK--  244 (373)
T ss_dssp             EEHHHHHHTG--GGCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEEEETTTTEEEECCCSSCEECCTTCB--
T ss_pred             cHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHH---CCcccccCCHHHEEEecCCCCcEEEEeCCCceecCCccc--
Confidence            9999987543  268999999999999999999998   999999999999999  5678899999999987754432  


Q ss_pred             eeeeeccccCCCccccccCCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhHHHHHhhhcCCCCCH
Q 005257          526 TTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRAKGGFDE  605 (705)
Q Consensus       526 ~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~l~~~~~~~~  605 (705)
                      .....||+.|+|||++.+..++.++|||||||++|||++|+.||......  +.. ..+.....        ........
T Consensus       245 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~--~~~-~~i~~~~~--------~~~~~~~~  313 (373)
T 2x4f_A          245 LKVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDA--ETL-NNILACRW--------DLEDEEFQ  313 (373)
T ss_dssp             CCCCCSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSSHH--HHH-HHHHHTCC--------CSCSGGGT
T ss_pred             cccccCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHH--HHH-HHHHhccC--------CCChhhhc
Confidence            22347999999999999888999999999999999999999999865421  111 11111110        00000001


Q ss_pred             HHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 005257          606 DEVERVLHLGLLCAYPDPRARPTMRQVVKV  635 (705)
Q Consensus       606 ~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  635 (705)
                      .....+.+++..||+.||++|||+.|++++
T Consensus       314 ~~~~~~~~li~~~L~~dp~~Rps~~e~l~h  343 (373)
T 2x4f_A          314 DISEEAKEFISKLLIKEKSWRISASEALKH  343 (373)
T ss_dssp             TSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred             cCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence            223568899999999999999999999983

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*

Probab=100.00  E-value=9.7e-41  Score=352.90  Aligned_cols=263  Identities=25%  Similarity=0.406  Sum_probs=215.2

Q ss_pred             HhCCCCcceEEeecCceEEEEEEE-----cCCCeEEEEEEeccCCc-hhHHHHHHHHHHhccC-CCCCcceeeeeeeecc
Q 005257          362 ATKGFSEENVIGVGGNGKVYKGVL-----EGGGAEIAVKRISHEND-GGTRAFLAEISSLGRL-KHKSLVGLRGWCKREK  434 (705)
Q Consensus       362 at~~f~~~~~LG~G~fg~Vy~~~~-----~~~~~~vavK~i~~~~~-~~~~~~~~Ei~~l~~l-~Hpniv~l~g~~~~~~  434 (705)
                      ..++|...+.||+|+||.||+|.+     ..+++.||||++..... ...+.+.+|+.++.++ +||||+++++++.. .
T Consensus        21 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~-~   99 (313)
T 1t46_A           21 PRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTI-G   99 (313)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS-S
T ss_pred             ChhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEEEEEec-C
Confidence            446788899999999999999985     34678999999976543 3457799999999999 99999999999876 6


Q ss_pred             CceEEEEeeCCCCChhHHHHhcCCC---------------CcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCe
Q 005257          435 GSLMLVYDYMENGSLDKWIFQCDGS---------------MMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNV  499 (705)
Q Consensus       435 ~~~~lV~E~~~~gsL~~~L~~~~~~---------------~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NI  499 (705)
                      +..++||||+++|+|.+++......               ..+++.+++.++.|++.||.|||+   .+|+||||||+||
T Consensus       100 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~Ni  176 (313)
T 1t46_A          100 GPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLAS---KNCIHRDLAARNI  176 (313)
T ss_dssp             SSCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGE
T ss_pred             CCcEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCccceE
Confidence            6889999999999999999765421               248999999999999999999999   9999999999999


Q ss_pred             EEccCCCeeeeeeccceecCCCCcce-eeeeeccccCCCccccccCCCCccccEEEEehhHHHHhh-CCCCCCCCCccHH
Q 005257          500 LLDKEMNGRLGDFGLARMHGHGQVAS-TTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLS-GRRPIEEGKPNLV  577 (705)
Q Consensus       500 Lld~~~~~kL~DFGla~~~~~~~~~~-~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~Ellt-G~~Pf~~~~~~~~  577 (705)
                      |++.++.+||+|||+++......... .....||+.|+|||++.+..++.++|||||||++|||++ |+.||......  
T Consensus       177 l~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~--  254 (313)
T 1t46_A          177 LLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVD--  254 (313)
T ss_dssp             EEETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSS--
T ss_pred             EEcCCCCEEEccccccccccccccceeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCCcccch--
Confidence            99999999999999998765543322 223467889999999998899999999999999999999 99999765432  


Q ss_pred             HHHHHHHHhCchhHHHHHhhhcCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHhccc
Q 005257          578 EMVWELMVQGKLLDALDARLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLEGKIE  641 (705)
Q Consensus       578 ~~v~~~~~~~~~~~~id~~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~  641 (705)
                      ........         ....  ...+......+.+++..||+.||.+|||+.|+++.|+..+.
T Consensus       255 ~~~~~~~~---------~~~~--~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~  307 (313)
T 1t46_A          255 SKFYKMIK---------EGFR--MLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQIS  307 (313)
T ss_dssp             HHHHHHHH---------HTCC--CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             hHHHHHhc---------cCCC--CCCcccCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHH
Confidence            11111111         1111  11223344678899999999999999999999999998766

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}

Probab=100.00  E-value=2.8e-40  Score=357.23  Aligned_cols=272  Identities=19%  Similarity=0.207  Sum_probs=212.9

Q ss_pred             cccCHHHHHHHhCCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCCchhHHHHHHHHHHhccCC-----CCCccee
Q 005257          352 HRITYQEIEAATKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLK-----HKSLVGL  426 (705)
Q Consensus       352 ~~~~~~el~~at~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~~~~~~~~~Ei~~l~~l~-----Hpniv~l  426 (705)
                      ..+++++.....++|...++||+|+||+||+|.+..+++.||||++.. .....+.+..|+.+++.++     ||||+++
T Consensus        23 ~~~~~~~g~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~-~~~~~~~~~~e~~~l~~l~~~~~~h~~iv~~  101 (360)
T 3llt_A           23 VHFSWKKGMLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRN-IKKYTRSAKIEADILKKIQNDDINNNNIVKY  101 (360)
T ss_dssp             GSCCCCTTCEETTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECS-CHHHHHHHHHHHHHHHHTCCCSTTGGGBCCE
T ss_pred             eeeeeecceEecCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEecc-chhhhhhhHHHHHHHHHhcccCCCCCCeecc
Confidence            456667777778999999999999999999999998999999999864 3344567788999999886     9999999


Q ss_pred             eeeeeeccCceEEEEeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEcc---
Q 005257          427 RGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDK---  503 (705)
Q Consensus       427 ~g~~~~~~~~~~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~---  503 (705)
                      ++++.. .+..++||||+ +++|.+++...... .+++.++..++.||+.||.|||+   ++|+||||||+|||++.   
T Consensus       102 ~~~~~~-~~~~~lv~e~~-~~~L~~~~~~~~~~-~~~~~~~~~i~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~~~  175 (360)
T 3llt_A          102 HGKFMY-YDHMCLIFEPL-GPSLYEIITRNNYN-GFHIEDIKLYCIEILKALNYLRK---MSLTHTDLKPENILLDDPYF  175 (360)
T ss_dssp             EEEEEE-TTEEEEEECCC-CCBHHHHHHHTTTC-CCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEESCTTC
T ss_pred             cceeeE-CCeeEEEEcCC-CCCHHHHHHhcCCC-CCCHHHHHHHHHHHHHHHHHHHH---CCeeeCCCCcccEEEccccc
Confidence            998876 67899999999 89999999875433 58999999999999999999998   99999999999999975   


Q ss_pred             ----------------------CCCeeeeeeccceecCCCCcceeeeeeccccCCCccccccCCCCccccEEEEehhHHH
Q 005257          504 ----------------------EMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILE  561 (705)
Q Consensus       504 ----------------------~~~~kL~DFGla~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~E  561 (705)
                                            ++.+||+|||+++......    ....||+.|+|||++.+..++.++|||||||++||
T Consensus       176 ~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~e  251 (360)
T 3llt_A          176 EKSLITVRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSDYH----GSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAE  251 (360)
T ss_dssp             CEEEEEEECTTTCCEEEEEEESCCCEEECCCTTCEETTSCC----CSCCSCGGGCCHHHHTTCCCCTTHHHHHHHHHHHH
T ss_pred             cccccchhcccccccccccccCCCCEEEEeccCceecCCCC----cCccCcccccCcHHHcCCCCCCccchHHHHHHHHH
Confidence                                  7889999999998754322    23578999999999999999999999999999999


Q ss_pred             HhhCCCCCCCCCccHHHHHHHHHHhCchhHHH-HHhhhc---------------C-------------CCCC---HHHHH
Q 005257          562 VLSGRRPIEEGKPNLVEMVWELMVQGKLLDAL-DARLRA---------------K-------------GGFD---EDEVE  609 (705)
Q Consensus       562 lltG~~Pf~~~~~~~~~~v~~~~~~~~~~~~i-d~~l~~---------------~-------------~~~~---~~~~~  609 (705)
                      |++|+.||........-...... .+...... ......               .             ...+   ....+
T Consensus       252 ll~g~~pf~~~~~~~~~~~~~~~-~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~  330 (360)
T 3llt_A          252 LYTGSLLFRTHEHMEHLAMMESI-IQPIPKNMLYEATKTNGSKYVNKDELKLAWPENASSINSIKHVKKCLPLYKIIKHE  330 (360)
T ss_dssp             HHHSSCSCCCSSHHHHHHHHHHH-TCCCCHHHHHHHTTSGGGGGEETTTTEECTTTTCSCHHHHHHHHTCCCHHHHCCCH
T ss_pred             HHHCCCCCCCCcHHHHHHHHHHh-cCCCCHHHHhhhhhccCccccCcccceecCcccccchhhhhhhhhcccccccchHH
Confidence            99999999765432111101111 11111111 000000               0             0000   00115


Q ss_pred             HHHHHHHHcCCCCCCCCCCHHHHHHH
Q 005257          610 RVLHLGLLCAYPDPRARPTMRQVVKV  635 (705)
Q Consensus       610 ~l~~l~~~Cl~~dP~~RPs~~evl~~  635 (705)
                      .+.+++..||+.||++|||+.|++++
T Consensus       331 ~l~~li~~~L~~dP~~Rpta~elL~h  356 (360)
T 3llt_A          331 LFCDFLYSILQIDPTLRPSPAELLKH  356 (360)
T ss_dssp             HHHHHHHHHCCSSGGGSCCHHHHTTS
T ss_pred             HHHHHHHHHhcCChhhCCCHHHHhcC
Confidence            67799999999999999999998763

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*

Probab=100.00  E-value=6.7e-41  Score=373.24  Aligned_cols=251  Identities=24%  Similarity=0.335  Sum_probs=198.7

Q ss_pred             hCCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccC---CchhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEE
Q 005257          363 TKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHE---NDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLML  439 (705)
Q Consensus       363 t~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~---~~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~l  439 (705)
                      .++|+..+.||+|+||.||+|.+..+++.||||++...   .......+.+|+.+++.++||||+++++++.. .+.+++
T Consensus       147 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~-~~~~~l  225 (446)
T 4ejn_A          147 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQT-HDRLCF  225 (446)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEE-TTEEEE
T ss_pred             hHHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEee-CCEEEE
Confidence            35688899999999999999999999999999998753   33445678899999999999999999999886 678999


Q ss_pred             EEeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecC
Q 005257          440 VYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHG  519 (705)
Q Consensus       440 V~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~  519 (705)
                      ||||+++|+|.+++....   .+++..+..++.||+.||.|||+  ..+|+||||||+|||++.++.+||+|||+++...
T Consensus       226 v~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH~--~~giiHrDlkp~NIll~~~~~~kl~DFG~a~~~~  300 (446)
T 4ejn_A          226 VMEYANGGELFFHLSRER---VFSEDRARFYGAEIVSALDYLHS--EKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGI  300 (446)
T ss_dssp             EECCCSSCBHHHHHHHHS---CCCHHHHHHHHHHHHHHHHHHHH--HTCCCCCCCCGGGEEECSSSCEEECCCCCCCTTC
T ss_pred             EEeeCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHhh--cCCEEECCCCHHHEEECCCCCEEEccCCCceecc
Confidence            999999999999997643   68999999999999999999995  2789999999999999999999999999998643


Q ss_pred             CCCcceeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhHHHHHhhhc
Q 005257          520 HGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRA  599 (705)
Q Consensus       520 ~~~~~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~l~~  599 (705)
                      .... .....+||+.|+|||++.+..++.++|||||||++|||++|+.||......   .....+..+            
T Consensus       301 ~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~---~~~~~i~~~------------  364 (446)
T 4ejn_A          301 KDGA-TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE---KLFELILME------------  364 (446)
T ss_dssp             C------CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH---HHHHHHHHC------------
T ss_pred             CCCc-ccccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHH---HHHHHHHhC------------
Confidence            3222 233468999999999999999999999999999999999999999765431   111111111            


Q ss_pred             CCCCCHHHHHHHHHHHHHcCCCCCCCCC-----CHHHHHHH
Q 005257          600 KGGFDEDEVERVLHLGLLCAYPDPRARP-----TMRQVVKV  635 (705)
Q Consensus       600 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RP-----s~~evl~~  635 (705)
                      ...++......+.+++..||+.||.+||     ++.|++++
T Consensus       365 ~~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~t~~ell~h  405 (446)
T 4ejn_A          365 EIRFPRTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQH  405 (446)
T ss_dssp             CCCCCTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTS
T ss_pred             CCCCCccCCHHHHHHHHHHcccCHHHhCCCCCCCHHHHHhC
Confidence            1222333446788999999999999999     99998874

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}

Probab=100.00  E-value=1.4e-40  Score=352.31  Aligned_cols=260  Identities=19%  Similarity=0.261  Sum_probs=202.9

Q ss_pred             hCCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCC---chhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEE
Q 005257          363 TKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHEN---DGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLML  439 (705)
Q Consensus       363 t~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~---~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~l  439 (705)
                      -++|...+.||+|+||.||+|.+..+++.||||++....   ....+.+.+|+.++.+++||||+++++++.. ++..++
T Consensus        33 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~-~~~~~l  111 (309)
T 2h34_A           33 FGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEI-DGQLYV  111 (309)
T ss_dssp             -CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEE-TTEEEE
T ss_pred             eccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEee-CCeEEE
Confidence            467899999999999999999999899999999987542   2234778999999999999999999999876 678999


Q ss_pred             EEeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecC
Q 005257          440 VYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHG  519 (705)
Q Consensus       440 V~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~  519 (705)
                      ||||+++++|.+++....   .+++.+++.++.|++.||.|||+   .+|+||||||+|||++.++.+||+|||++....
T Consensus       112 v~e~~~~~~L~~~l~~~~---~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~~  185 (309)
T 2h34_A          112 DMRLINGVDLAAMLRRQG---PLAPPRAVAIVRQIGSALDAAHA---AGATHRDVKPENILVSADDFAYLVDFGIASATT  185 (309)
T ss_dssp             EEECCCCEEHHHHHHHHC---SCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTSCEEECSCCC-----
T ss_pred             EEEecCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHH---CcCCcCCCChHHEEEcCCCCEEEecCccCcccc
Confidence            999999999999997643   58999999999999999999999   999999999999999999999999999998765


Q ss_pred             CCCcceeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhHHHHHhhhc
Q 005257          520 HGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRA  599 (705)
Q Consensus       520 ~~~~~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~l~~  599 (705)
                      ...........||+.|+|||++.+..++.++||||||+++|||++|+.||......   .....+..... .        
T Consensus       186 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~---~~~~~~~~~~~-~--------  253 (309)
T 2h34_A          186 DEKLTQLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQLS---VMGAHINQAIP-R--------  253 (309)
T ss_dssp             -----------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSCHHH---HHHHHHHSCCC-C--------
T ss_pred             ccccccccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCchHH---HHHHHhccCCC-C--------
Confidence            54433344567899999999999889999999999999999999999999764321   11111111110 0        


Q ss_pred             CCCCCHHHHHHHHHHHHHcCCCCCCCCC-CHHHHHHHHHhccc
Q 005257          600 KGGFDEDEVERVLHLGLLCAYPDPRARP-TMRQVVKVLEGKIE  641 (705)
Q Consensus       600 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RP-s~~evl~~L~~~~~  641 (705)
                      ...........+.+++..||+.||++|| ++.++++.|+..+.
T Consensus       254 ~~~~~~~~~~~l~~li~~~l~~dP~~Rp~s~~~l~~~l~~~l~  296 (309)
T 2h34_A          254 PSTVRPGIPVAFDAVIARGMAKNPEDRYVTCGDLSAAAHAALA  296 (309)
T ss_dssp             GGGTSTTCCTHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHTCC
T ss_pred             ccccCCCCCHHHHHHHHHhccCCHHHHHHhHHHHHHHHHHHHH
Confidence            0111222345688899999999999999 99999999997765

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*

Probab=100.00  E-value=1.4e-40  Score=352.38  Aligned_cols=255  Identities=20%  Similarity=0.340  Sum_probs=198.6

Q ss_pred             hCCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCCc---hhHHHHHHHHHHhccCCCCCcceeeeeeeeccC---c
Q 005257          363 TKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHEND---GGTRAFLAEISSLGRLKHKSLVGLRGWCKREKG---S  436 (705)
Q Consensus       363 t~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~---~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~---~  436 (705)
                      .++|...+.||+|+||.||+|.+..+++.||||+++....   ...+.+.+|++++.+++||||+++++++.....   .
T Consensus        11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~   90 (311)
T 3ork_A           11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPL   90 (311)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEEE
T ss_pred             cCcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCcc
Confidence            4678999999999999999999998999999999976532   334678999999999999999999998875332   3


Q ss_pred             eEEEEeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccce
Q 005257          437 LMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLAR  516 (705)
Q Consensus       437 ~~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~  516 (705)
                      .++||||+++++|.+++....   .+++.+++.++.|++.||.|||+   .+|+||||||+|||++.++.+||+|||+++
T Consensus        91 ~~lv~e~~~g~~L~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~dlkp~Nil~~~~~~~kl~Dfg~a~  164 (311)
T 3ork_A           91 PYIVMEYVDGVTLRDIVHTEG---PMTPKRAIEVIADACQALNFSHQ---NGIIHRDVKPANIMISATNAVKVMDFGIAR  164 (311)
T ss_dssp             EEEEEECCCEEEHHHHHHHHC---SCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEEETTSCEEECCCSCC-
T ss_pred             cEEEEecCCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHH---CCCCcCCCCHHHEEEcCCCCEEEeeccCcc
Confidence            499999999999999997643   68999999999999999999998   999999999999999999999999999998


Q ss_pred             ecCCCCc--ceeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhHHHH
Q 005257          517 MHGHGQV--ASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALD  594 (705)
Q Consensus       517 ~~~~~~~--~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~~id  594 (705)
                      .......  .......||+.|+|||++.+..++.++|||||||++|||++|+.||......  +............... 
T Consensus       165 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~--~~~~~~~~~~~~~~~~-  241 (311)
T 3ork_A          165 AIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPV--SVAYQHVREDPIPPSA-  241 (311)
T ss_dssp             -----------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHH--HHHHHHHHCCCCCHHH-
T ss_pred             cccccccccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChH--HHHHHHhcCCCCCccc-
Confidence            7654322  2233457899999999999989999999999999999999999999765432  2222222222111100 


Q ss_pred             HhhhcCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHH
Q 005257          595 ARLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVK  634 (705)
Q Consensus       595 ~~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~  634 (705)
                         . ..    .....+.+++..||+.||++||+..+++.
T Consensus       242 ---~-~~----~~~~~l~~li~~~l~~dP~~R~~~~~~l~  273 (311)
T 3ork_A          242 ---R-HE----GLSADLDAVVLKALAKNPENRYQTAAEMR  273 (311)
T ss_dssp             ---H-ST----TCCHHHHHHHHHHTCSSGGGSCSSHHHHH
T ss_pred             ---c-cC----CCCHHHHHHHHHHHhcCHhhChhhHHHHH
Confidence               0 01    12356789999999999999997776654

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*

Probab=100.00  E-value=4.2e-40  Score=342.18  Aligned_cols=247  Identities=26%  Similarity=0.358  Sum_probs=208.1

Q ss_pred             hCCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCCchhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEEEEe
Q 005257          363 TKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYD  442 (705)
Q Consensus       363 t~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~lV~E  442 (705)
                      .++|...+.||+|+||.||+|.+..++..||+|++........+.+.+|++++++++||||+++++++.. ....++|||
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~lv~e   86 (277)
T 3f3z_A            8 NQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFED-NTDIYLVME   86 (277)
T ss_dssp             HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHTCCCTTBCCEEEEEEC-SSEEEEEEE
T ss_pred             hhhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccchHHHHHHHHHHHHhCCCCCEeeEEEEEec-CCeEEEEEe
Confidence            4568889999999999999999999999999999987666667889999999999999999999999876 678999999


Q ss_pred             eCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEE---ccCCCeeeeeeccceecC
Q 005257          443 YMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLL---DKEMNGRLGDFGLARMHG  519 (705)
Q Consensus       443 ~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILl---d~~~~~kL~DFGla~~~~  519 (705)
                      |+++++|.+++....   .+++.+++.++.|++.||.|||+   .+|+||||||+|||+   +.++.+||+|||++....
T Consensus        87 ~~~~~~L~~~~~~~~---~~~~~~~~~i~~~i~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~~  160 (277)
T 3f3z_A           87 LCTGGELFERVVHKR---VFRESDAARIMKDVLSAVAYCHK---LNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFK  160 (277)
T ss_dssp             CCCSCBHHHHHHHHC---SCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEESSSSTTCCEEECCCTTCEECC
T ss_pred             ccCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHH---CCccCCCCCHHHEEEecCCCCCcEEEEecccceecc
Confidence            999999999987643   58999999999999999999998   999999999999999   788999999999998765


Q ss_pred             CCCcceeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhHHHHHhhhc
Q 005257          520 HGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRA  599 (705)
Q Consensus       520 ~~~~~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~l~~  599 (705)
                      ....  .....||+.|+|||++.+ .++.++||||||+++|||++|+.||......   .....+..+..          
T Consensus       161 ~~~~--~~~~~~t~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~---~~~~~~~~~~~----------  224 (277)
T 3f3z_A          161 PGKM--MRTKVGTPYYVSPQVLEG-LYGPECDEWSAGVMMYVLLCGYPPFSAPTDS---EVMLKIREGTF----------  224 (277)
T ss_dssp             TTSC--BCCCCSCTTTCCHHHHTT-CBCTTHHHHHHHHHHHHHHHSSCSSCCSSHH---HHHHHHHHCCC----------
T ss_pred             Cccc--hhccCCCCCccChHHhcc-cCCchhhehhHHHHHHHHHHCCCCCCCCCHH---HHHHHHHhCCC----------
Confidence            4432  233578999999999865 4899999999999999999999999765431   12222222211          


Q ss_pred             CCCCCH----HHHHHHHHHHHHcCCCCCCCCCCHHHHHH
Q 005257          600 KGGFDE----DEVERVLHLGLLCAYPDPRARPTMRQVVK  634 (705)
Q Consensus       600 ~~~~~~----~~~~~l~~l~~~Cl~~dP~~RPs~~evl~  634 (705)
                        ..+.    .....+.+++..||+.||++||++.++++
T Consensus       225 --~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~  261 (277)
T 3f3z_A          225 --TFPEKDWLNVSPQAESLIRRLLTKSPKQRITSLQALE  261 (277)
T ss_dssp             --CCCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred             --CCCchhhhcCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence              1121    12356889999999999999999999986

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*

Probab=100.00  E-value=6.5e-41  Score=357.41  Aligned_cols=270  Identities=24%  Similarity=0.360  Sum_probs=214.6

Q ss_pred             CCCCcceEEeecCceEEEEEEE----cCCCeEEEEEEeccCCchhHHHHHHHHHHhccCCCCCcceeeeeeee-ccCceE
Q 005257          364 KGFSEENVIGVGGNGKVYKGVL----EGGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKR-EKGSLM  438 (705)
Q Consensus       364 ~~f~~~~~LG~G~fg~Vy~~~~----~~~~~~vavK~i~~~~~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~-~~~~~~  438 (705)
                      ++|+..+.||+|+||.||+|.+    ..+++.||||++........+.+.+|++++++++||||+++++++.. .....+
T Consensus        23 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~  102 (327)
T 3lxl_A           23 RHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLR  102 (327)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSSCEEE
T ss_pred             hhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCCceEE
Confidence            5688899999999999999994    56789999999987776677889999999999999999999998864 345689


Q ss_pred             EEEeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceec
Q 005257          439 LVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMH  518 (705)
Q Consensus       439 lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~  518 (705)
                      +||||+++++|.+++.....  .+++.+++.++.|++.||.|||+   .+|+||||||+|||++.++.+||+|||+++..
T Consensus       103 lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~i~~qi~~al~~lH~---~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~  177 (327)
T 3lxl_A          103 LVMEYLPSGCLRDFLQRHRA--RLDASRLLLYSSQICKGMEYLGS---RRCVHRDLAARNILVESEAHVKIADFGLAKLL  177 (327)
T ss_dssp             EEEECCTTCBHHHHHHHHGG--GCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEEETTEEEECCGGGCEEC
T ss_pred             EEEeecCCCCHHHHHHhccc--CCCHHHHHHHHHHHHHHHHHHHh---CCccCCCCChhhEEECCCCCEEEcccccceec
Confidence            99999999999999976432  58999999999999999999998   99999999999999999999999999999877


Q ss_pred             CCCCcce--eeeeeccccCCCccccccCCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhC----chhHH
Q 005257          519 GHGQVAS--TTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQG----KLLDA  592 (705)
Q Consensus       519 ~~~~~~~--~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~----~~~~~  592 (705)
                      .......  .....||+.|+|||++.+..++.++|||||||++|||++|+.||........... ......    .+.+.
T Consensus       178 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~-~~~~~~~~~~~~~~~  256 (327)
T 3lxl_A          178 PLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMM-GCERDVPALSRLLEL  256 (327)
T ss_dssp             CTTCSEEECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHC-C----CCHHHHHHHH
T ss_pred             ccCCccceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCccccchhhhhc-ccccccccHHHHHHH
Confidence            5443221  2234678889999999888899999999999999999999999865321110000 000000    01111


Q ss_pred             HHHhhhcCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHhccc
Q 005257          593 LDARLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLEGKIE  641 (705)
Q Consensus       593 id~~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~  641 (705)
                      +.....  ...+......+.+++..||+.||++|||+.|+++.|+....
T Consensus       257 ~~~~~~--~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~  303 (327)
T 3lxl_A          257 LEEGQR--LPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQLDMLWS  303 (327)
T ss_dssp             HHTTCC--CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHC--
T ss_pred             hhcccC--CCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHh
Confidence            111111  22334455778999999999999999999999999997765

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*

Probab=100.00  E-value=1e-40  Score=347.80  Aligned_cols=259  Identities=23%  Similarity=0.332  Sum_probs=207.4

Q ss_pred             HhCCCCcceEEeecCceEEEEEEEcC---CCeEEEEEEeccCC-chhHHHHHHHHHHhccCCCCCcceeeeeeeeccCce
Q 005257          362 ATKGFSEENVIGVGGNGKVYKGVLEG---GGAEIAVKRISHEN-DGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSL  437 (705)
Q Consensus       362 at~~f~~~~~LG~G~fg~Vy~~~~~~---~~~~vavK~i~~~~-~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~  437 (705)
                      ..++|...+.||+|+||.||+|.+..   .+..||+|.+.... ....+.+.+|+.++++++||||+++++++..  +..
T Consensus        10 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~--~~~   87 (281)
T 3cc6_A           10 AREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEE--EPT   87 (281)
T ss_dssp             CGGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCCTTBCCEEEEECS--SSC
T ss_pred             cccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhCCCCCcceEEEEEcC--CCC
Confidence            34678889999999999999999753   33569999987653 3456789999999999999999999998754  456


Q ss_pred             EEEEeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeecccee
Q 005257          438 MLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARM  517 (705)
Q Consensus       438 ~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~  517 (705)
                      ++||||+++++|.+++.....  .+++..++.++.|++.||.|||+   .+|+||||||+|||++.++.+||+|||+++.
T Consensus        88 ~~v~e~~~~~~L~~~l~~~~~--~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~  162 (281)
T 3cc6_A           88 WIIMELYPYGELGHYLERNKN--SLKVLTLVLYSLQICKAMAYLES---INCVHRDIAVRNILVASPECVKLGDFGLSRY  162 (281)
T ss_dssp             EEEEECCTTCBHHHHHHHHTT--TCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCSGGGEEEEETTEEEECCCCGGGC
T ss_pred             EEEEecCCCCCHHHHHHhccc--cCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCccceEEECCCCcEEeCccCCCcc
Confidence            899999999999999976543  58999999999999999999998   9999999999999999999999999999987


Q ss_pred             cCCCCcceeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhh-CCCCCCCCCccHHHHHHHHHHhCchhHHHHHh
Q 005257          518 HGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLS-GRRPIEEGKPNLVEMVWELMVQGKLLDALDAR  596 (705)
Q Consensus       518 ~~~~~~~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~Ellt-G~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~  596 (705)
                      .............+|+.|+|||++.+..++.++|||||||++|||++ |+.||........   ...+..+.        
T Consensus       163 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~~~~~---~~~~~~~~--------  231 (281)
T 3cc6_A          163 IEDEDYYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDV---IGVLEKGD--------  231 (281)
T ss_dssp             C---------CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCGGGH---HHHHHHTC--------
T ss_pred             cccccccccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccCChHHH---HHHHhcCC--------
Confidence            65543333334567889999999988899999999999999999998 9999976443211   11111111        


Q ss_pred             hhcCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHhccc
Q 005257          597 LRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLEGKIE  641 (705)
Q Consensus       597 l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~  641 (705)
                       .  ...+....+.+.+++..||+.||++||++.|+++.|+...+
T Consensus       232 -~--~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~  273 (281)
T 3cc6_A          232 -R--LPKPDLCPPVLYTLMTRCWDYDPSDRPRFTELVCSLSDVYQ  273 (281)
T ss_dssp             -C--CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             -C--CCCCCCCCHHHHHHHHHHccCCchhCcCHHHHHHHHHHHHH
Confidence             1  11222334668899999999999999999999999987654

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...

Probab=100.00  E-value=1.2e-40  Score=349.05  Aligned_cols=261  Identities=26%  Similarity=0.464  Sum_probs=199.9

Q ss_pred             HhCCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCC--chhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEE
Q 005257          362 ATKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHEN--DGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLML  439 (705)
Q Consensus       362 at~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~--~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~l  439 (705)
                      ..++|...+.||+|+||+||+|.+..   .||||+++...  ....+.+.+|++++++++||||+++++++.  ....++
T Consensus        22 ~~~~y~~~~~lG~G~~g~Vy~~~~~~---~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~--~~~~~l   96 (289)
T 3og7_A           22 PDGQITVGQRIGSGSFGTVYKGKWHG---DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST--APQLAI   96 (289)
T ss_dssp             CTTSCEEEEEEEECSSEEEEEEESSS---EEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC--SSSCEE
T ss_pred             CccceeeeeEecCCCCeEEEEEEEcC---ceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeecc--CCccEE
Confidence            35678999999999999999998753   49999987553  345578999999999999999999999764  456899


Q ss_pred             EEeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecC
Q 005257          440 VYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHG  519 (705)
Q Consensus       440 V~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~  519 (705)
                      ||||+++++|.+++....  ..+++.+++.++.|++.||.|||+   .+|+||||||+|||++.++.+||+|||+++...
T Consensus        97 v~e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~~L~~lH~---~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~  171 (289)
T 3og7_A           97 VTQWCEGSSLYHHLHASE--TKFEMKKLIDIARQTARGMDYLHA---KSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKS  171 (289)
T ss_dssp             EEECCCEEEHHHHHTTC-----CCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEEETTTEEEECCCC------
T ss_pred             EEEecCCCcHHHHHhhcc--CCCCHHHHHHHHHHHHHHHHHHHh---CCcccccCccceEEECCCCCEEEccceeccccc
Confidence            999999999999996543  369999999999999999999999   999999999999999999999999999998654


Q ss_pred             CCC-cceeeeeeccccCCCccccc---cCCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhHHHHH
Q 005257          520 HGQ-VASTTRVVGTVGYLAPEVFS---SGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDA  595 (705)
Q Consensus       520 ~~~-~~~~~~~~gt~~y~APE~~~---~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~  595 (705)
                      ... ........||+.|+|||++.   +..++.++|||||||++|||++|+.||......  +.+......+.....+  
T Consensus       172 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~--~~~~~~~~~~~~~~~~--  247 (289)
T 3og7_A          172 RWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNR--DQIIEMVGRGSLSPDL--  247 (289)
T ss_dssp             ------------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCCH--HHHHHHHHHTSCCCCT--
T ss_pred             cccccccccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccchH--HHHHHHhcccccCcch--
Confidence            322 22233457899999999986   567889999999999999999999999764431  2222333332221100  


Q ss_pred             hhhcCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHhccc
Q 005257          596 RLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLEGKIE  641 (705)
Q Consensus       596 ~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~  641 (705)
                           ..........+.+++..||+.||++|||+.++++.|+...+
T Consensus       248 -----~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~l~~  288 (289)
T 3og7_A          248 -----SKVRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEELAR  288 (289)
T ss_dssp             -----TSSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC
T ss_pred             -----hhccccCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHhh
Confidence                 11223345678999999999999999999999999987643

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*

Probab=100.00  E-value=1.6e-40  Score=349.56  Aligned_cols=268  Identities=21%  Similarity=0.352  Sum_probs=208.7

Q ss_pred             CCCCcceEEeecCceEEEEEE----EcCCCeEEEEEEeccCC-chhHHHHHHHHHHhccCCCCCcceeeeeeeecc-Cce
Q 005257          364 KGFSEENVIGVGGNGKVYKGV----LEGGGAEIAVKRISHEN-DGGTRAFLAEISSLGRLKHKSLVGLRGWCKREK-GSL  437 (705)
Q Consensus       364 ~~f~~~~~LG~G~fg~Vy~~~----~~~~~~~vavK~i~~~~-~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~-~~~  437 (705)
                      +.|+..+.||+|+||.||+|.    ...+++.||||++.... ....+.+.+|++++++++||||+++++++.... ..+
T Consensus        21 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~  100 (302)
T 4e5w_A           21 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGI  100 (302)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---CCE
T ss_pred             hhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCceE
Confidence            457888999999999999999    45678999999997543 344578999999999999999999999987632 568


Q ss_pred             EEEEeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeecccee
Q 005257          438 MLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARM  517 (705)
Q Consensus       438 ~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~  517 (705)
                      ++||||+++|+|.+++.....  .+++.+++.++.|++.||.|||+   .+|+||||||+|||++.++.+||+|||+++.
T Consensus       101 ~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~  175 (302)
T 4e5w_A          101 KLIMEFLPSGSLKEYLPKNKN--KINLKQQLKYAVQICKGMDYLGS---RQYVHRDLAARNVLVESEHQVKIGDFGLTKA  175 (302)
T ss_dssp             EEEEECCTTCBHHHHHHHHTT--TCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEEETTEEEECCCTTCEE
T ss_pred             EEEEEeCCCCcHHHHHHhccc--cCCHHHHHHHHHHHHHHHHHhhc---CCcccCCCchheEEEcCCCCEEECccccccc
Confidence            999999999999999966543  58999999999999999999999   9999999999999999999999999999987


Q ss_pred             cCCCCcc--eeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhC---chhHH
Q 005257          518 HGHGQVA--STTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQG---KLLDA  592 (705)
Q Consensus       518 ~~~~~~~--~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~---~~~~~  592 (705)
                      .......  ......||..|+|||++.+..++.++|||||||++|||++|+.|+....    ..........   .....
T Consensus       176 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~----~~~~~~~~~~~~~~~~~~  251 (302)
T 4e5w_A          176 IETDKEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPM----ALFLKMIGPTHGQMTVTR  251 (302)
T ss_dssp             CCTTCCEEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHH----HHHHHHHCSCCGGGHHHH
T ss_pred             ccCCCcceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCcchh----hHHhhccCCcccccCHHH
Confidence            7654322  1223467888999999998889999999999999999999999864321    1111110000   00011


Q ss_pred             HHHhhhc--CCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHhcc
Q 005257          593 LDARLRA--KGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLEGKI  640 (705)
Q Consensus       593 id~~l~~--~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~  640 (705)
                      +...+..  ....+......+.+++..||+.||.+|||+.++++.|+.++
T Consensus       252 ~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~ll  301 (302)
T 4e5w_A          252 LVNTLKEGKRLPCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIEGFEALL  301 (302)
T ss_dssp             HHHHHHTTCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             HHHHHhccCCCCCCCCCCHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHh
Confidence            1111110  12233445567899999999999999999999999998654

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*

Probab=100.00  E-value=1.8e-40  Score=354.53  Aligned_cols=250  Identities=23%  Similarity=0.316  Sum_probs=196.0

Q ss_pred             hCCCCcceEEeecCceEEEEEEEc---CCCeEEEEEEeccCC----chhHHHHHHHHHHhccCCCCCcceeeeeeeeccC
Q 005257          363 TKGFSEENVIGVGGNGKVYKGVLE---GGGAEIAVKRISHEN----DGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKG  435 (705)
Q Consensus       363 t~~f~~~~~LG~G~fg~Vy~~~~~---~~~~~vavK~i~~~~----~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~  435 (705)
                      .++|...+.||+|+||.||++...   .+++.||+|+++...    ......+.+|+.+++.++||||+++++++.. .+
T Consensus        16 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~   94 (327)
T 3a62_A           16 PECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQT-GG   94 (327)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEEC-SS
T ss_pred             HHHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEc-CC
Confidence            356888999999999999999985   578999999997642    2334567899999999999999999998876 67


Q ss_pred             ceEEEEeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccc
Q 005257          436 SLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLA  515 (705)
Q Consensus       436 ~~~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla  515 (705)
                      .+++||||+++|+|.+++....   .+++..+..++.||+.||.|||+   .+|+||||||+|||++.++.+||+|||++
T Consensus        95 ~~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~qi~~al~~lH~---~~ivH~Dlkp~Nill~~~~~~kl~Dfg~~  168 (327)
T 3a62_A           95 KLYLILEYLSGGELFMQLEREG---IFMEDTACFYLAEISMALGHLHQ---KGIIYRDLKPENIMLNHQGHVKLTDFGLC  168 (327)
T ss_dssp             CEEEEEECCTTEEHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCTTTEEECTTSCEEECCCSCC
T ss_pred             EEEEEEeCCCCCcHHHHHHhCC---CCCHHHHHHHHHHHHHHHHHHHh---CCEEcccCCHHHeEECCCCcEEEEeCCcc
Confidence            8999999999999999997643   58999999999999999999999   99999999999999999999999999999


Q ss_pred             eecCCCCcceeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhHHHHH
Q 005257          516 RMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDA  595 (705)
Q Consensus       516 ~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~  595 (705)
                      +....... ......||+.|+|||++.+..++.++|||||||++|||++|+.||......   .....+..+        
T Consensus       169 ~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~---~~~~~i~~~--------  236 (327)
T 3a62_A          169 KESIHDGT-VTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRK---KTIDKILKC--------  236 (327)
T ss_dssp             -----------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH---HHHHHHHHT--------
T ss_pred             cccccCCc-cccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCCCCHH---HHHHHHHhC--------
Confidence            75433221 223357899999999999889999999999999999999999999865421   111111111        


Q ss_pred             hhhcCCCCCHHHHHHHHHHHHHcCCCCCCCCC-----CHHHHHHH
Q 005257          596 RLRAKGGFDEDEVERVLHLGLLCAYPDPRARP-----TMRQVVKV  635 (705)
Q Consensus       596 ~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP-----s~~evl~~  635 (705)
                          ...++......+.+++..||+.||++||     ++.|++++
T Consensus       237 ----~~~~p~~~~~~~~~li~~~L~~dp~~R~~~~~~~~~e~l~h  277 (327)
T 3a62_A          237 ----KLNLPPYLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQAH  277 (327)
T ss_dssp             ----CCCCCTTSCHHHHHHHHHHSCSCGGGSTTSSTTTHHHHHHS
T ss_pred             ----CCCCCCCCCHHHHHHHHHHHhcCHhhccCCCCCCHHHHHcC
Confidence                1222333446788999999999999999     67777764

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=100.00  E-value=8.3e-41  Score=345.16  Aligned_cols=256  Identities=29%  Similarity=0.441  Sum_probs=210.5

Q ss_pred             CCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCCchhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEEEEee
Q 005257          364 KGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDY  443 (705)
Q Consensus       364 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~lV~E~  443 (705)
                      ++|...+.||+|+||.||+|.+. +++.||+|++..... ..+.+.+|++++++++||||+++++++.. ++..++||||
T Consensus         8 ~~y~~~~~lg~G~~g~V~~~~~~-~~~~vaiK~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~lv~e~   84 (267)
T 3t9t_A            8 SELTFVQEIGSGQFGLVHLGYWL-NKDKVAIKTIREGAM-SEEDFIEEAEVMMKLSHPKLVQLYGVCLE-QAPICLVTEF   84 (267)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEET-TTEEEEEEEECTTTB-CHHHHHHHHHHHHTCCCTTBCCEEEEECS-SSSCEEEECC
T ss_pred             hheeeeeEecCCCceeEEEEEec-CCCeEEEEEccccCC-CHHHHHHHHHHHHhCCCCCEeeEEEEEcc-CCCeEEEEeC
Confidence            56788999999999999999987 568899999975533 34679999999999999999999999876 6688999999


Q ss_pred             CCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecCCCCc
Q 005257          444 MENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQV  523 (705)
Q Consensus       444 ~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~~~~~  523 (705)
                      +++++|.+++.....  .+++..++.++.|++.||.|||+   .+++||||||+||+++.++.+||+|||+++.......
T Consensus        85 ~~~~~L~~~~~~~~~--~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~  159 (267)
T 3t9t_A           85 MEHGCLSDYLRTQRG--LFAAETLLGMCLDVCEGMAYLEE---ACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQY  159 (267)
T ss_dssp             CTTCBHHHHHHHTTT--CCCHHHHHHHHHHHHHHHHHHHH---TTCCCSSCCGGGEEECGGGCEEECCTTGGGGBCCHHH
T ss_pred             CCCCcHHHHHhhCcc--cCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCchheEEECCCCCEEEcccccccccccccc
Confidence            999999999976432  58999999999999999999998   9999999999999999999999999999986643322


Q ss_pred             ceeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhh-CCCCCCCCCccHHHHHHHHHHhCchhHHHHHhhhcCCC
Q 005257          524 ASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLS-GRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRAKGG  602 (705)
Q Consensus       524 ~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~Ellt-G~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~l~~~~~  602 (705)
                      .......+++.|+|||++.+..++.++||||||+++|||++ |+.||......   .....+..+.         .  ..
T Consensus       160 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~---~~~~~i~~~~---------~--~~  225 (267)
T 3t9t_A          160 TSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNS---EVVEDISTGF---------R--LY  225 (267)
T ss_dssp             HSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH---HHHHHHHTTC---------C--CC
T ss_pred             cccccccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCCCHH---HHHHHHhcCC---------c--CC
Confidence            22223456788999999988899999999999999999999 89999765421   1112222211         0  11


Q ss_pred             CCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHhccc
Q 005257          603 FDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLEGKIE  641 (705)
Q Consensus       603 ~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~  641 (705)
                      .+......+.+++..||+.||++||++.++++.|+...+
T Consensus       226 ~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~  264 (267)
T 3t9t_A          226 KPRLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAE  264 (267)
T ss_dssp             CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             CCccCcHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence            122334568899999999999999999999999987654

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...

Probab=100.00  E-value=1.3e-40  Score=356.43  Aligned_cols=262  Identities=24%  Similarity=0.401  Sum_probs=212.8

Q ss_pred             HhCCCCcceEEeecCceEEEEEEEc-------CCCeEEEEEEeccCC-chhHHHHHHHHHHhccC-CCCCcceeeeeeee
Q 005257          362 ATKGFSEENVIGVGGNGKVYKGVLE-------GGGAEIAVKRISHEN-DGGTRAFLAEISSLGRL-KHKSLVGLRGWCKR  432 (705)
Q Consensus       362 at~~f~~~~~LG~G~fg~Vy~~~~~-------~~~~~vavK~i~~~~-~~~~~~~~~Ei~~l~~l-~Hpniv~l~g~~~~  432 (705)
                      ..++|...+.||+|+||.||+|.+.       .++..||||++.... ....+.+.+|+++++++ +||||++++++|..
T Consensus        33 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~  112 (334)
T 2pvf_A           33 PRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ  112 (334)
T ss_dssp             CGGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred             CHhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEcc
Confidence            3567888999999999999999975       356789999997653 34467799999999999 89999999999876


Q ss_pred             ccCceEEEEeeCCCCChhHHHHhcCC-------------CCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCe
Q 005257          433 EKGSLMLVYDYMENGSLDKWIFQCDG-------------SMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNV  499 (705)
Q Consensus       433 ~~~~~~lV~E~~~~gsL~~~L~~~~~-------------~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NI  499 (705)
                       .+..++||||+++|+|.+++.....             ...+++.+++.++.|++.||.|||+   .+|+||||||+||
T Consensus       113 -~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dlkp~NI  188 (334)
T 2pvf_A          113 -DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLAS---QKCIHRDLAARNV  188 (334)
T ss_dssp             -SSCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGE
T ss_pred             -CCceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHh---CCeeCCCCccceE
Confidence             6688999999999999999976432             1248999999999999999999999   9999999999999


Q ss_pred             EEccCCCeeeeeeccceecCCCCcc-eeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhh-CCCCCCCCCccHH
Q 005257          500 LLDKEMNGRLGDFGLARMHGHGQVA-STTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLS-GRRPIEEGKPNLV  577 (705)
Q Consensus       500 Lld~~~~~kL~DFGla~~~~~~~~~-~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~Ellt-G~~Pf~~~~~~~~  577 (705)
                      |++.++.+||+|||+++........ ......+|+.|+|||++.+..++.++|||||||++|||++ |+.||.....   
T Consensus       189 ll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~---  265 (334)
T 2pvf_A          189 LVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPV---  265 (334)
T ss_dssp             EECTTCCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCH---
T ss_pred             EEcCCCCEEEccccccccccccccccccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCCcCcCCH---
Confidence            9999999999999999876544322 2233467889999999988889999999999999999999 9999976542   


Q ss_pred             HHHHHHHHhCchhHHHHHhhhcCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHhccc
Q 005257          578 EMVWELMVQGKLLDALDARLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLEGKIE  641 (705)
Q Consensus       578 ~~v~~~~~~~~~~~~id~~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~  641 (705)
                      ..+...+..+..           ...+......+.+++..||+.||.+||++.|+++.|+....
T Consensus       266 ~~~~~~~~~~~~-----------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~l~~  318 (334)
T 2pvf_A          266 EELFKLLKEGHR-----------MDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILT  318 (334)
T ss_dssp             HHHHHHHHHTCC-----------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             HHHHHHHhcCCC-----------CCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence            112222222211           11223344678899999999999999999999999998766

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*

Probab=100.00  E-value=1.9e-40  Score=362.80  Aligned_cols=265  Identities=20%  Similarity=0.253  Sum_probs=205.1

Q ss_pred             hCCCCcceEEeec--CceEEEEEEEcCCCeEEEEEEeccCC--chhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceE
Q 005257          363 TKGFSEENVIGVG--GNGKVYKGVLEGGGAEIAVKRISHEN--DGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLM  438 (705)
Q Consensus       363 t~~f~~~~~LG~G--~fg~Vy~~~~~~~~~~vavK~i~~~~--~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~  438 (705)
                      .++|+..++||+|  +||+||+|.+..+++.||||++....  ....+.+.+|+.+++.++||||+++++++.. ++.++
T Consensus        24 ~~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~-~~~~~  102 (389)
T 3gni_B           24 GGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIA-DNELW  102 (389)
T ss_dssp             GGGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEE-TTEEE
T ss_pred             CCcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEE-CCEEE
Confidence            4578899999999  99999999999999999999997553  3445678889999999999999999999886 67899


Q ss_pred             EEEeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceec
Q 005257          439 LVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMH  518 (705)
Q Consensus       439 lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~  518 (705)
                      +||||+++|+|.+++...... .+++..+..++.||+.||.|||+   .+|+||||||+|||++.++.+||+|||++...
T Consensus       103 lv~e~~~~~~L~~~l~~~~~~-~~~~~~~~~~~~qi~~~l~~LH~---~~ivHrDlkp~NIll~~~~~~kl~dfg~~~~~  178 (389)
T 3gni_B          103 VVTSFMAYGSAKDLICTHFMD-GMNELAIAYILQGVLKALDYIHH---MGYVHRSVKASHILISVDGKVYLSGLRSNLSM  178 (389)
T ss_dssp             EEEECCTTCBHHHHHHHTCTT-CCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTCCEEECCGGGCEEC
T ss_pred             EEEEccCCCCHHHHHhhhccc-CCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEcCCCCEEEcccccceee
Confidence            999999999999999765333 69999999999999999999999   99999999999999999999999999998654


Q ss_pred             CCCCc------ceeeeeeccccCCCcccccc--CCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchh
Q 005257          519 GHGQV------ASTTRVVGTVGYLAPEVFSS--GRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLL  590 (705)
Q Consensus       519 ~~~~~------~~~~~~~gt~~y~APE~~~~--~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~  590 (705)
                      .....      .......||+.|+|||++.+  ..++.++|||||||++|||++|+.||........  .... ..+...
T Consensus       179 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~--~~~~-~~~~~~  255 (389)
T 3gni_B          179 ISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQM--LLEK-LNGTVP  255 (389)
T ss_dssp             EETTEECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCCSTTH--HHHC-------
T ss_pred             ccccccccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHH--HHHH-hcCCCC
Confidence            32211      11122478999999999987  5789999999999999999999999976433110  0000 001000


Q ss_pred             HHHHHh-----------------------hh-----------cCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 005257          591 DALDAR-----------------------LR-----------AKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKV  635 (705)
Q Consensus       591 ~~id~~-----------------------l~-----------~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  635 (705)
                      ..++..                       +.           ....+.......+.+++..||+.||++|||+.|++++
T Consensus       256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~ell~h  334 (389)
T 3gni_B          256 CLLDTSTIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSASTLLNH  334 (389)
T ss_dssp             --------------------------------------------------CCHHHHHHHHHHTCSCTTTSCCHHHHTTS
T ss_pred             ccccccccccccccccccccccccccccccccCccccccCCCCCCccccccCHHHHHHHHHHhhcCcccCCCHHHHhcC
Confidence            000000                       00           0001122234568899999999999999999999874

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}

Probab=100.00  E-value=1.5e-40  Score=358.60  Aligned_cols=253  Identities=23%  Similarity=0.369  Sum_probs=192.9

Q ss_pred             HhCCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCCchhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEEEE
Q 005257          362 ATKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVY  441 (705)
Q Consensus       362 at~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~lV~  441 (705)
                      ..++|...+.||+|+||.||+|.+..+++.||||+++...  ..+.+.+|++++.+++||||+++++++.. ....++||
T Consensus        51 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~-~~~~~lv~  127 (349)
T 2w4o_A           51 LSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV--DKKIVRTEIGVLLRLSHPNIIKLKEIFET-PTEISLVL  127 (349)
T ss_dssp             GGGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC------------CHHHHHCCCTTBCCEEEEEEC-SSEEEEEE
T ss_pred             ccCcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccch--hHHHHHHHHHHHHhCCCCCCcceeeeEec-CCeEEEEE
Confidence            4567899999999999999999999889999999997543  34668899999999999999999999876 67899999


Q ss_pred             eeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEcc---CCCeeeeeeccceec
Q 005257          442 DYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDK---EMNGRLGDFGLARMH  518 (705)
Q Consensus       442 E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~---~~~~kL~DFGla~~~  518 (705)
                      ||+++|+|.+++....   .+++.++..++.|++.||.|||+   .+|+||||||+|||++.   ++.+||+|||+++..
T Consensus       128 e~~~~~~L~~~l~~~~---~~~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~~  201 (349)
T 2w4o_A          128 ELVTGGELFDRIVEKG---YYSERDAADAVKQILEAVAYLHE---NGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIV  201 (349)
T ss_dssp             CCCCSCBHHHHHTTCS---SCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEESSSSTTCCEEECCCC-----
T ss_pred             EeCCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHH---CCeEecCCCcccEEEecCCCCCCEEEccCcccccc
Confidence            9999999999996532   68999999999999999999998   99999999999999975   889999999999876


Q ss_pred             CCCCcceeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhHHHHHhhh
Q 005257          519 GHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDARLR  598 (705)
Q Consensus       519 ~~~~~~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~l~  598 (705)
                      ....  ......||+.|+|||++.+..++.++|||||||++|||++|+.||......  +.....+..+...        
T Consensus       202 ~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~--~~~~~~i~~~~~~--------  269 (349)
T 2w4o_A          202 EHQV--LMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGD--QFMFRRILNCEYY--------  269 (349)
T ss_dssp             -------------CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTCH--HHHHHHHHTTCCC--------
T ss_pred             Cccc--ccccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCccc--HHHHHHHHhCCCc--------
Confidence            4432  223457999999999999989999999999999999999999999765432  1122222222110        


Q ss_pred             cCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 005257          599 AKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKV  635 (705)
Q Consensus       599 ~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  635 (705)
                      ............+.+++..||+.||++|||+.|++++
T Consensus       270 ~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h  306 (349)
T 2w4o_A          270 FISPWWDEVSLNAKDLVRKLIVLDPKKRLTTFQALQH  306 (349)
T ss_dssp             CCTTTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred             cCCchhhhCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence            0011112334568899999999999999999999884

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*

Probab=100.00  E-value=3.3e-40  Score=340.96  Aligned_cols=252  Identities=21%  Similarity=0.363  Sum_probs=205.3

Q ss_pred             CCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCC--chhHHHHHHHHHHhccCCCCCcceeeeeeeec-cCceEEE
Q 005257          364 KGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHEN--DGGTRAFLAEISSLGRLKHKSLVGLRGWCKRE-KGSLMLV  440 (705)
Q Consensus       364 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~--~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~-~~~~~lV  440 (705)
                      ++|...+.||+|+||.||+|.+.  +..||||++....  ....+.+.+|+.++++++||||+++++++... .+..++|
T Consensus        10 ~~y~~~~~lg~G~~g~V~~~~~~--~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv   87 (271)
T 3kmu_A           10 KQLNFLTKLNENHSGELWKGRWQ--GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLI   87 (271)
T ss_dssp             GGCEEEEEEEEETTEEEEEEEET--TEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCEEE
T ss_pred             HHhHHHHHhcCCCcceEEEEEEC--CeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeEee
Confidence            56888999999999999999985  7889999987653  34456799999999999999999999998763 2678999


Q ss_pred             EeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCC--eeecCCCCCCeEEccCCCeeeeeeccceec
Q 005257          441 YDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKK--VLHRDIKSSNVLLDKEMNGRLGDFGLARMH  518 (705)
Q Consensus       441 ~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~--iiHrDLkp~NILld~~~~~kL~DFGla~~~  518 (705)
                      |||+++|+|.+++..... ..+++.+++.++.|++.||.|||+   .+  ++||||||+|||++.++.++|+|||++...
T Consensus        88 ~e~~~~~~L~~~l~~~~~-~~~~~~~~~~i~~qi~~~l~~lH~---~~~~i~H~dikp~Nil~~~~~~~~l~~~~~~~~~  163 (271)
T 3kmu_A           88 THWMPYGSLYNVLHEGTN-FVVDQSQAVKFALDMARGMAFLHT---LEPLIPRHALNSRSVMIDEDMTARISMADVKFSF  163 (271)
T ss_dssp             EECCTTCBHHHHHHSCSS-CCCCHHHHHHHHHHHHHHHHHHTT---SSSCCTTCCCSGGGEEECTTSCEEEEGGGSCCTT
T ss_pred             ecccCCCcHHHHHhhccc-CCCCHHHHHHHHHHHHHHHHHHhc---CCCceecCCCccceEEEcCCcceeEEeccceeee
Confidence            999999999999976433 268999999999999999999998   77  999999999999999999999999887643


Q ss_pred             CCCCcceeeeeeccccCCCccccccCCCCc---cccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhHHHHH
Q 005257          519 GHGQVASTTRVVGTVGYLAPEVFSSGRAST---QTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDA  595 (705)
Q Consensus       519 ~~~~~~~~~~~~gt~~y~APE~~~~~~~s~---ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~  595 (705)
                      ...      ...||+.|+|||++.+..++.   ++|||||||++|||++|+.||......  +........+.       
T Consensus       164 ~~~------~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~--~~~~~~~~~~~-------  228 (271)
T 3kmu_A          164 QSP------GRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNM--EIGMKVALEGL-------  228 (271)
T ss_dssp             SCT------TCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSCHH--HHHHHHHHSCC-------
T ss_pred             ccc------CccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccChH--HHHHHHHhcCC-------
Confidence            222      246899999999998755444   799999999999999999999765431  11111111111       


Q ss_pred             hhhcCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHhcc
Q 005257          596 RLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLEGKI  640 (705)
Q Consensus       596 ~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~  640 (705)
                        .  ...+......+.+++..||+.||++|||+.++++.|+.+.
T Consensus       229 --~--~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~L~~l~  269 (271)
T 3kmu_A          229 --R--PTIPPGISPHVSKLMKICMNEDPAKRPKFDMIVPILEKMQ  269 (271)
T ss_dssp             --C--CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC
T ss_pred             --C--CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhh
Confidence              1  2223344567889999999999999999999999998654

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}

Probab=100.00  E-value=5e-41  Score=369.71  Aligned_cols=266  Identities=22%  Similarity=0.280  Sum_probs=213.3

Q ss_pred             ccCHHHHHHHhCCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCC---chhHHHHHHHHHHhccCCCCCcceeeee
Q 005257          353 RITYQEIEAATKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHEN---DGGTRAFLAEISSLGRLKHKSLVGLRGW  429 (705)
Q Consensus       353 ~~~~~el~~at~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~---~~~~~~~~~Ei~~l~~l~Hpniv~l~g~  429 (705)
                      .+.++++....++|...+.||+|+||+||++..+.+++.||||++++..   ....+.+.+|..++..++||||++++++
T Consensus        50 ~~~~~~~~~~~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~  129 (412)
T 2vd5_A           50 VVRLKEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFA  129 (412)
T ss_dssp             HHHHHHHSCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEE
T ss_pred             hhhhhhccCChhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEE
Confidence            3455666777889999999999999999999999999999999996532   2233458899999999999999999998


Q ss_pred             eeeccCceEEEEeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeee
Q 005257          430 CKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRL  509 (705)
Q Consensus       430 ~~~~~~~~~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL  509 (705)
                      +.. .+.+++||||+++|+|.+++.+.+.  .+++..+..++.||+.||.|||+   ++|+||||||+|||++.++++||
T Consensus       130 ~~~-~~~~~lVmE~~~gg~L~~~l~~~~~--~l~~~~~~~~~~qi~~aL~~LH~---~giiHrDLKp~NILld~~g~vkL  203 (412)
T 2vd5_A          130 FQD-ENYLYLVMEYYVGGDLLTLLSKFGE--RIPAEMARFYLAEIVMAIDSVHR---LGYVHRDIKPDNILLDRCGHIRL  203 (412)
T ss_dssp             EEC-SSEEEEEECCCCSCBHHHHHHHHSS--CCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEE
T ss_pred             Eee-CCEEEEEEcCCCCCcHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHH---CCeeecccCHHHeeecCCCCEEE
Confidence            876 6789999999999999999976532  58999999999999999999998   99999999999999999999999


Q ss_pred             eeeccceecCCCCcceeeeeeccccCCCccccc-------cCCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHH
Q 005257          510 GDFGLARMHGHGQVASTTRVVGTVGYLAPEVFS-------SGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWE  582 (705)
Q Consensus       510 ~DFGla~~~~~~~~~~~~~~~gt~~y~APE~~~-------~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~  582 (705)
                      +|||+++.............+||+.|+|||++.       ...++.++|||||||++|||++|+.||......  +. ..
T Consensus       204 ~DFGla~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~--~~-~~  280 (412)
T 2vd5_A          204 ADFGSCLKLRADGTVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTA--ET-YG  280 (412)
T ss_dssp             CCCTTCEECCTTSCEECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCSSHH--HH-HH
T ss_pred             eechhheeccCCCccccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCCCHH--HH-HH
Confidence            999999877655443344468999999999987       356899999999999999999999999865431  11 11


Q ss_pred             HHHhCchhHHHHHhhhcCCCCCHHHHHHHHHHHHHcCCCCCCCC---CCHHHHHHH
Q 005257          583 LMVQGKLLDALDARLRAKGGFDEDEVERVLHLGLLCAYPDPRAR---PTMRQVVKV  635 (705)
Q Consensus       583 ~~~~~~~~~~id~~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~R---Ps~~evl~~  635 (705)
                      .+...      ...+.. ..........+.+++..||. +|.+|   |++.|++++
T Consensus       281 ~i~~~------~~~~~~-p~~~~~~s~~~~dli~~lL~-~p~~Rlgr~~~~ei~~H  328 (412)
T 2vd5_A          281 KIVHY------KEHLSL-PLVDEGVPEEARDFIQRLLC-PPETRLGRGGAGDFRTH  328 (412)
T ss_dssp             HHHTH------HHHCCC-C----CCCHHHHHHHHTTSS-CGGGCTTTTTHHHHHTS
T ss_pred             HHHhc------ccCcCC-CccccCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhcC
Confidence            11110      001100 11112234568899999999 99998   689998774

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}

Probab=100.00  E-value=9e-41  Score=358.56  Aligned_cols=263  Identities=18%  Similarity=0.218  Sum_probs=205.2

Q ss_pred             HHHHHhCCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccC-----CchhHHHHHHHHHHhccCCCCCcceeeeeeee
Q 005257          358 EIEAATKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHE-----NDGGTRAFLAEISSLGRLKHKSLVGLRGWCKR  432 (705)
Q Consensus       358 el~~at~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~-----~~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~  432 (705)
                      ++....++|...+.||+|+||.||+|.+..+++.||+|++...     .....+.+.+|++++++++||||+++++++..
T Consensus        20 ~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~   99 (345)
T 3hko_A           20 SLLELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYED   99 (345)
T ss_dssp             CHHHHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEEC
T ss_pred             hhhhhhhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhcc
Confidence            3456677899999999999999999999999999999998643     33456789999999999999999999999876


Q ss_pred             ccCceEEEEeeCCCCChhHHHHhcC-------------------------------------CCCcccHHHHHHHHHHHH
Q 005257          433 EKGSLMLVYDYMENGSLDKWIFQCD-------------------------------------GSMMLSCEERIRVLKDVA  475 (705)
Q Consensus       433 ~~~~~~lV~E~~~~gsL~~~L~~~~-------------------------------------~~~~l~~~~~~~i~~qia  475 (705)
                       .+..++||||+++|+|.+++....                                     ....+++..++.++.|++
T Consensus       100 -~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~  178 (345)
T 3hko_A          100 -EQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIF  178 (345)
T ss_dssp             -SSEEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHH
T ss_pred             -CCeEEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHH
Confidence             678999999999999999985210                                     012356788899999999


Q ss_pred             HHHHHHhcCCCCCeeecCCCCCCeEEccCC--CeeeeeeccceecCCCC---cceeeeeeccccCCCcccccc--CCCCc
Q 005257          476 AGVLYLHEGWEKKVLHRDIKSSNVLLDKEM--NGRLGDFGLARMHGHGQ---VASTTRVVGTVGYLAPEVFSS--GRAST  548 (705)
Q Consensus       476 ~gL~yLH~~~~~~iiHrDLkp~NILld~~~--~~kL~DFGla~~~~~~~---~~~~~~~~gt~~y~APE~~~~--~~~s~  548 (705)
                      .||.|||+   .+|+||||||+|||++.++  .+||+|||+++......   ........||+.|+|||++.+  ..++.
T Consensus       179 ~~l~~LH~---~~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~  255 (345)
T 3hko_A          179 SALHYLHN---QGICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGP  255 (345)
T ss_dssp             HHHHHHHH---TTEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSSCCCT
T ss_pred             HHHHHHHH---CCccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhccCCCCCCc
Confidence            99999999   8999999999999998776  89999999998764322   112344679999999999865  67899


Q ss_pred             cccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhHHHHHhhhcCCCCCHHHHHHHHHHHHHcCCCCCCCCCC
Q 005257          549 QTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRAKGGFDEDEVERVLHLGLLCAYPDPRARPT  628 (705)
Q Consensus       549 ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs  628 (705)
                      ++|||||||++|||++|+.||......  +.............         ..........+.+++..||+.||.+||+
T Consensus       256 ~~DiwslG~il~el~~g~~pf~~~~~~--~~~~~~~~~~~~~~---------~~~~~~~~~~~~~li~~~l~~~p~~Rps  324 (345)
T 3hko_A          256 KCDAWSAGVLLHLLLMGAVPFPGVNDA--DTISQVLNKKLCFE---------NPNYNVLSPLARDLLSNLLNRNVDERFD  324 (345)
T ss_dssp             HHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHHHHHCCCCTT---------SGGGGGSCHHHHHHHHHHSCSCTTTSCC
T ss_pred             HHHHHHHHHHHHHHHHCCCCCCCCChH--HHHHHHHhcccccC---------CcccccCCHHHHHHHHHHcCCChhHCCC
Confidence            999999999999999999999765431  22212111111000         0000112356889999999999999999


Q ss_pred             HHHHHHH
Q 005257          629 MRQVVKV  635 (705)
Q Consensus       629 ~~evl~~  635 (705)
                      +.+++++
T Consensus       325 ~~~~l~h  331 (345)
T 3hko_A          325 AMRALQH  331 (345)
T ss_dssp             HHHHHHS
T ss_pred             HHHHhcC
Confidence            9999873

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...

Probab=100.00  E-value=2.8e-40  Score=344.15  Aligned_cols=248  Identities=23%  Similarity=0.378  Sum_probs=204.6

Q ss_pred             hCCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCC---chhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEE
Q 005257          363 TKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHEN---DGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLML  439 (705)
Q Consensus       363 t~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~---~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~l  439 (705)
                      .++|...+.||+|+||.||+|.+..++..||||++....   ....+.+.+|+.++++++||||+++++++.. ....++
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~l   86 (279)
T 3fdn_A            8 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHD-ATRVYL   86 (279)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEEC-SSEEEE
T ss_pred             cccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEec-CCEEEE
Confidence            457888999999999999999999999999999986432   2234678999999999999999999999876 678999


Q ss_pred             EEeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecC
Q 005257          440 VYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHG  519 (705)
Q Consensus       440 V~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~  519 (705)
                      ||||+++|+|.+++....   .+++..++.++.|++.||.|||+   .+|+||||||+|||++.++.+||+|||++....
T Consensus        87 v~e~~~~~~l~~~l~~~~---~~~~~~~~~~~~qi~~~l~~LH~---~~i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~~  160 (279)
T 3fdn_A           87 ILEYAPLGTVYRELQKLS---KFDEQRTATYITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAP  160 (279)
T ss_dssp             EECCCTTEEHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHT---TTCEECCCCGGGEEECTTSCEEECSCCEESCC-
T ss_pred             EEecCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHh---CCEecccCChHhEEEcCCCCEEEEeccccccCC
Confidence            999999999999997653   58999999999999999999998   999999999999999999999999999986543


Q ss_pred             CCCcceeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhHHHHHhhhc
Q 005257          520 HGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRA  599 (705)
Q Consensus       520 ~~~~~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~l~~  599 (705)
                      ...   .....||+.|+|||.+.+..++.++||||||+++|||++|+.||......   .....+...            
T Consensus       161 ~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~---~~~~~~~~~------------  222 (279)
T 3fdn_A          161 SSR---RTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQ---ETYKRISRV------------  222 (279)
T ss_dssp             ----------CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHH---HHHHHHHHT------------
T ss_pred             ccc---ccccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCCcHH---HHHHHHHhC------------
Confidence            322   23457899999999999989999999999999999999999999864421   111111111            


Q ss_pred             CCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 005257          600 KGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKV  635 (705)
Q Consensus       600 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  635 (705)
                      ...++......+.+++..||+.||++|||+.|++++
T Consensus       223 ~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~h  258 (279)
T 3fdn_A          223 EFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEH  258 (279)
T ss_dssp             CCCCCTTSCHHHHHHHHHHCCSSGGGSCCHHHHHHC
T ss_pred             CCCCCCcCCHHHHHHHHHHhccChhhCCCHHHHhhC
Confidence            122333344668899999999999999999999985

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...

Probab=100.00  E-value=6.8e-41  Score=355.98  Aligned_cols=269  Identities=22%  Similarity=0.410  Sum_probs=217.0

Q ss_pred             CHHHHHHHhCCCCcceEEeecCceEEEEEEEc-----CCCeEEEEEEeccCCc-hhHHHHHHHHHHhccCCCCCcceeee
Q 005257          355 TYQEIEAATKGFSEENVIGVGGNGKVYKGVLE-----GGGAEIAVKRISHEND-GGTRAFLAEISSLGRLKHKSLVGLRG  428 (705)
Q Consensus       355 ~~~el~~at~~f~~~~~LG~G~fg~Vy~~~~~-----~~~~~vavK~i~~~~~-~~~~~~~~Ei~~l~~l~Hpniv~l~g  428 (705)
                      ..++++...++|...+.||+|+||.||+|.+.     .+++.||||++..... .....+.+|+.+++.++||||+++++
T Consensus        16 ~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~   95 (322)
T 1p4o_A           16 VPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLG   95 (322)
T ss_dssp             CCCTTBCCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEE
T ss_pred             ChhhhcchhhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhcCCCCEeeeEE
Confidence            34455667788999999999999999999876     3468899999975533 34567899999999999999999999


Q ss_pred             eeeeccCceEEEEeeCCCCChhHHHHhcC-------CCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEE
Q 005257          429 WCKREKGSLMLVYDYMENGSLDKWIFQCD-------GSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLL  501 (705)
Q Consensus       429 ~~~~~~~~~~lV~E~~~~gsL~~~L~~~~-------~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILl  501 (705)
                      ++.. .+..++||||+++|+|.+++....       ....+++.+++.++.|++.||.|||+   .+|+||||||+|||+
T Consensus        96 ~~~~-~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dikp~NIli  171 (322)
T 1p4o_A           96 VVSQ-GQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNA---NKFVHRDLAARNCMV  171 (322)
T ss_dssp             EECS-SSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHH---TTCBCSCCSGGGEEE
T ss_pred             EEcc-CCccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHH---CCCccCCCccceEEE
Confidence            9876 668899999999999999997532       11357999999999999999999999   999999999999999


Q ss_pred             ccCCCeeeeeeccceecCCCCc-ceeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhh-CCCCCCCCCccHHHH
Q 005257          502 DKEMNGRLGDFGLARMHGHGQV-ASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLS-GRRPIEEGKPNLVEM  579 (705)
Q Consensus       502 d~~~~~kL~DFGla~~~~~~~~-~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~Ellt-G~~Pf~~~~~~~~~~  579 (705)
                      +.++.+||+|||+++....... .......||+.|+|||++.+..++.++|||||||++|||++ |+.||.....   ..
T Consensus       172 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~---~~  248 (322)
T 1p4o_A          172 AEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSN---EQ  248 (322)
T ss_dssp             CTTCCEEECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCH---HH
T ss_pred             cCCCeEEECcCccccccccccccccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCccccCCH---HH
Confidence            9999999999999986543321 11223467889999999998899999999999999999999 8899876442   11


Q ss_pred             HHHHHHhCchhHHHHHhhhcCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHhccc
Q 005257          580 VWELMVQGKLLDALDARLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLEGKIE  641 (705)
Q Consensus       580 v~~~~~~~~~~~~id~~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~  641 (705)
                      ....+..+..           ...+......+.+++..||+.||++|||+.|+++.|+....
T Consensus       249 ~~~~~~~~~~-----------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~~L~~~~~  299 (322)
T 1p4o_A          249 VLRFVMEGGL-----------LDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEME  299 (322)
T ss_dssp             HHHHHHTTCC-----------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGSC
T ss_pred             HHHHHHcCCc-----------CCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHhhc
Confidence            2222222221           11223344668899999999999999999999999987654

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}

Probab=100.00  E-value=2.2e-40  Score=353.92  Aligned_cols=258  Identities=21%  Similarity=0.375  Sum_probs=204.3

Q ss_pred             hCCCCcceEEeecCceEEEEEEEcCCCeE----EEEEEeccC-CchhHHHHHHHHHHhccCCCCCcceeeeeeeeccCce
Q 005257          363 TKGFSEENVIGVGGNGKVYKGVLEGGGAE----IAVKRISHE-NDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSL  437 (705)
Q Consensus       363 t~~f~~~~~LG~G~fg~Vy~~~~~~~~~~----vavK~i~~~-~~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~  437 (705)
                      .++|+..+.||+|+||.||+|.+..+++.    ||+|.+... .....+.+.+|+.++++++||||++++++|..  ...
T Consensus        14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~--~~~   91 (327)
T 3lzb_A           14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLT--STV   91 (327)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEES--SSE
T ss_pred             HhHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEec--CCc
Confidence            35788999999999999999999777654    577777544 34456789999999999999999999999875  357


Q ss_pred             EEEEeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeecccee
Q 005257          438 MLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARM  517 (705)
Q Consensus       438 ~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~  517 (705)
                      ++|+||+++|+|.+++.....  .+++..++.++.|++.||.|||+   ++|+||||||+|||++.++.+||+|||+++.
T Consensus        92 ~~v~~~~~~g~L~~~l~~~~~--~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dikp~NIl~~~~~~~kL~DfG~a~~  166 (327)
T 3lzb_A           92 QLITQLMPFGCLLDYVREHKD--NIGSQYLLNWCVQIAKGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKL  166 (327)
T ss_dssp             EEEECCCSSCBHHHHHHHTTT--CCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEEEETTEEEECCTTC---
T ss_pred             eEEEEecCCCcHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHhh---CCCcCCCCCHHHEEEcCCCCEEEccCcceeE
Confidence            899999999999999987543  58999999999999999999999   9999999999999999999999999999987


Q ss_pred             cCCCCcc-eeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhh-CCCCCCCCCccHHHHHHHHHHhCchhHHHHH
Q 005257          518 HGHGQVA-STTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLS-GRRPIEEGKPNLVEMVWELMVQGKLLDALDA  595 (705)
Q Consensus       518 ~~~~~~~-~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~Ellt-G~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~  595 (705)
                      ....... ......||+.|+|||++.+..++.++|||||||++|||++ |+.||........   ...+..+        
T Consensus       167 ~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~---~~~~~~~--------  235 (327)
T 3lzb_A          167 LGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEI---SSILEKG--------  235 (327)
T ss_dssp             -------------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGH---HHHHHTT--------
T ss_pred             ccCccccccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCCHHHH---HHHHHcC--------
Confidence            6543222 2233456889999999999999999999999999999999 9999987543221   1111111        


Q ss_pred             hhhcCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHhccc
Q 005257          596 RLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLEGKIE  641 (705)
Q Consensus       596 ~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~  641 (705)
                       ..  ...+......+.+++..||+.||.+||++.|+++.|+....
T Consensus       236 -~~--~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~  278 (327)
T 3lzb_A          236 -ER--LPQPPICTIDVYMIMRKCWMIDADSRPKFRELIIEFSKMAR  278 (327)
T ss_dssp             -CC--CCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHT
T ss_pred             -CC--CCCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHh
Confidence             11  12233345568899999999999999999999999987654

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...

Probab=100.00  E-value=3.2e-40  Score=346.85  Aligned_cols=259  Identities=28%  Similarity=0.426  Sum_probs=206.2

Q ss_pred             CCCCcceEEeecCceEEEEEEEcCC---CeEEEEEEeccCCc-hhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEE
Q 005257          364 KGFSEENVIGVGGNGKVYKGVLEGG---GAEIAVKRISHEND-GGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLML  439 (705)
Q Consensus       364 ~~f~~~~~LG~G~fg~Vy~~~~~~~---~~~vavK~i~~~~~-~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~l  439 (705)
                      .+|...+.||+|+||+||+|.+..+   ...||+|.+..... ...+.+.+|+.++++++||||++++++|...++..++
T Consensus        25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~  104 (298)
T 3f66_A           25 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLV  104 (298)
T ss_dssp             EEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEE
T ss_pred             eehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCceEE
Confidence            4577889999999999999997543   34699999876533 4457799999999999999999999998776778899


Q ss_pred             EEeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecC
Q 005257          440 VYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHG  519 (705)
Q Consensus       440 V~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~  519 (705)
                      ||||+++|+|.+++....  ..+++.+++.++.|++.||.|||+   ++|+||||||+|||++.++.+||+|||+++...
T Consensus       105 v~e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~ql~~~l~~lH~---~~i~H~dikp~Nil~~~~~~~kl~Dfg~a~~~~  179 (298)
T 3f66_A          105 VLPYMKHGDLRNFIRNET--HNPTVKDLIGFGLQVAKGMKYLAS---KKFVHRDLAARNCMLDEKFTVKVADFGLARDMY  179 (298)
T ss_dssp             EEECCTTCBHHHHHHCTT--CCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECTTCCEEECSCGGGCCCS
T ss_pred             EEeCCCCCCHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHh---CCccCCCCchheEEECCCCCEEECccccccccc
Confidence            999999999999997533  258999999999999999999998   999999999999999999999999999998665


Q ss_pred             CCCc---ceeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhh-CCCCCCCCCccHHHHHHHHHHhCchhHHHHH
Q 005257          520 HGQV---ASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLS-GRRPIEEGKPNLVEMVWELMVQGKLLDALDA  595 (705)
Q Consensus       520 ~~~~---~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~Ellt-G~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~  595 (705)
                      ....   .......||+.|+|||.+.+..++.++|||||||++|||++ |..||........   ......+.       
T Consensus       180 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~~~---~~~~~~~~-------  249 (298)
T 3f66_A          180 DKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDI---TVYLLQGR-------  249 (298)
T ss_dssp             CGGGCBC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTSCTTTH---HHHHHTTC-------
T ss_pred             ccchhccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccCCHHHH---HHHHhcCC-------
Confidence            4322   12233567889999999998899999999999999999999 5555554332110   11111111       


Q ss_pred             hhhcCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHhccc
Q 005257          596 RLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLEGKIE  641 (705)
Q Consensus       596 ~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~  641 (705)
                        .  ...+......+.+++..||+.||++|||+.++++.|+....
T Consensus       250 --~--~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~  291 (298)
T 3f66_A          250 --R--LLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFS  291 (298)
T ss_dssp             --C--CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             --C--CCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence              0  11122234568899999999999999999999999998766

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=3.1e-40  Score=346.53  Aligned_cols=261  Identities=28%  Similarity=0.361  Sum_probs=207.7

Q ss_pred             CCCcceEEeecCceEEEEEEEcCCC---eEEEEEEeccCCc-hhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEEE
Q 005257          365 GFSEENVIGVGGNGKVYKGVLEGGG---AEIAVKRISHEND-GGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLV  440 (705)
Q Consensus       365 ~f~~~~~LG~G~fg~Vy~~~~~~~~---~~vavK~i~~~~~-~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~lV  440 (705)
                      .|...++||+|+||+||+|.+..++   ..||+|++..... ...+.+.+|+.++++++||||+++++++...+...++|
T Consensus        22 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v  101 (298)
T 3pls_A           22 VTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVL  101 (298)
T ss_dssp             EEEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEE
T ss_pred             EEccCceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCcEEE
Confidence            3556789999999999999975544   3799999976543 45678999999999999999999999998755566999


Q ss_pred             EeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecCC
Q 005257          441 YDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGH  520 (705)
Q Consensus       441 ~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~~  520 (705)
                      |||+.+|+|.+++....  ..+++.+++.++.|++.||.|||+   .+++||||||+|||++.++.+||+|||+++....
T Consensus       102 ~e~~~~~~L~~~~~~~~--~~~~~~~~~~i~~qi~~~l~~LH~---~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~  176 (298)
T 3pls_A          102 LPYMCHGDLLQFIRSPQ--RNPTVKDLISFGLQVARGMEYLAE---QKFVHRDLAARNCMLDESFTVKVADFGLARDILD  176 (298)
T ss_dssp             ECCCTTCBHHHHHHCTT--CCCBHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECTTCCEEECCTTSSCTTTT
T ss_pred             EecccCCCHHHHHhccc--cCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCcceEEEcCCCcEEeCcCCCcccccC
Confidence            99999999999997633  368999999999999999999999   9999999999999999999999999999986543


Q ss_pred             CCc---ceeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhHHHHHhh
Q 005257          521 GQV---ASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDARL  597 (705)
Q Consensus       521 ~~~---~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~l  597 (705)
                      ...   .......+|+.|+|||.+.+..++.++|||||||++|||++|..|+.......  .....+..+.         
T Consensus       177 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~~~~--~~~~~~~~~~---------  245 (298)
T 3pls_A          177 REYYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDPF--DLTHFLAQGR---------  245 (298)
T ss_dssp             GGGGCSCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCGG--GHHHHHHTTC---------
T ss_pred             CcccccccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCccCCHH--HHHHHhhcCC---------
Confidence            221   12223467899999999999999999999999999999999666654332210  0111111111         


Q ss_pred             hcCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHhccccC
Q 005257          598 RAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLEGKIEAG  643 (705)
Q Consensus       598 ~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~~~  643 (705)
                      .  ...+......+.+++..||+.||.+|||+.++++.|+......
T Consensus       246 ~--~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~l~~~~~~l  289 (298)
T 3pls_A          246 R--LPQPEYCPDSLYQVMQQCWEADPAVRPTFRVLVGEVEQIVSAL  289 (298)
T ss_dssp             C--CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHC
T ss_pred             C--CCCCccchHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHH
Confidence            1  1122333467889999999999999999999999999877643

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}

Probab=100.00  E-value=1.1e-40  Score=355.85  Aligned_cols=262  Identities=21%  Similarity=0.329  Sum_probs=196.0

Q ss_pred             HHhCCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCCchhHHHHHHHHHHhccCC-CCCcceeeeeee-------e
Q 005257          361 AATKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLK-HKSLVGLRGWCK-------R  432 (705)
Q Consensus       361 ~at~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~~~~~~~~~Ei~~l~~l~-Hpniv~l~g~~~-------~  432 (705)
                      ....+|...++||+|+||.||+|.+..+++.||||++........+.+.+|+.++.+++ ||||+++++++.       .
T Consensus        25 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~  104 (337)
T 3ll6_A           25 LGELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDT  104 (337)
T ss_dssp             ETTEEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTT
T ss_pred             ccCceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCCchHHHHHHHHHHHHHHHhccCCChhhcccccccccccccc
Confidence            34457889999999999999999999899999999997776667788999999999996 999999999884       2


Q ss_pred             ccCceEEEEeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCC--eeecCCCCCCeEEccCCCeeee
Q 005257          433 EKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKK--VLHRDIKSSNVLLDKEMNGRLG  510 (705)
Q Consensus       433 ~~~~~~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~--iiHrDLkp~NILld~~~~~kL~  510 (705)
                      ....+++||||+. |+|.+++........+++.+++.++.||+.||.|||+   .+  |+||||||+|||++.++.+||+
T Consensus       105 ~~~~~~lv~e~~~-g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~---~~~~ivH~Dikp~NIl~~~~~~~kl~  180 (337)
T 3ll6_A          105 GQAEFLLLTELCK-GQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHR---QKPPIIHRDLKVENLLLSNQGTIKLC  180 (337)
T ss_dssp             SSEEEEEEEECCS-EEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHHT---SSSCCBCCCCCGGGCEECTTSCEEBC
T ss_pred             CCceEEEEEEecC-CCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHh---CCCCEEEccCCcccEEECCCCCEEEe
Confidence            2345899999996 7999998764444479999999999999999999998   77  9999999999999999999999


Q ss_pred             eeccceecCCCCcc-----------eeeeeeccccCCCcccc---ccCCCCccccEEEEehhHHHHhhCCCCCCCCCccH
Q 005257          511 DFGLARMHGHGQVA-----------STTRVVGTVGYLAPEVF---SSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNL  576 (705)
Q Consensus       511 DFGla~~~~~~~~~-----------~~~~~~gt~~y~APE~~---~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~  576 (705)
                      |||+++........           ......||+.|+|||++   .+..++.++|||||||++|||++|+.||...... 
T Consensus       181 Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~-  259 (337)
T 3ll6_A          181 DFGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAKL-  259 (337)
T ss_dssp             CCTTCBCCSSCC-------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC-------
T ss_pred             cCccceeccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcchhHH-
Confidence            99999876543221           11134689999999998   5667899999999999999999999999754321 


Q ss_pred             HHHHHHHHHhCchhHHHHHhhhcCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHhccccC
Q 005257          577 VEMVWELMVQGKLLDALDARLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLEGKIEAG  643 (705)
Q Consensus       577 ~~~v~~~~~~~~~~~~id~~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~~~  643 (705)
                                    ..+.....  ..........+.+++..||+.||++||++.|+++.|+......
T Consensus       260 --------------~~~~~~~~--~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~~~~~~  310 (337)
T 3ll6_A          260 --------------RIVNGKYS--IPPHDTQYTVFHSLIRAMLQVNPEERLSIAEVVHQLQEIAAAR  310 (337)
T ss_dssp             --------------------CC--CCTTCCSSGGGHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHHT
T ss_pred             --------------HhhcCccc--CCcccccchHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhcc
Confidence                          01111111  0111122245788999999999999999999999999776633

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0

Probab=100.00  E-value=2.1e-40  Score=343.20  Aligned_cols=250  Identities=29%  Similarity=0.496  Sum_probs=195.0

Q ss_pred             hCCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCCc----hhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceE
Q 005257          363 TKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHEND----GGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLM  438 (705)
Q Consensus       363 t~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~----~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~  438 (705)
                      .++|+..+.||+|+||.||+|.+.  +..||||++.....    ...+.+.+|+++++.++||||+++++++.. .+..+
T Consensus         6 ~~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~   82 (271)
T 3dtc_A            6 FAELTLEEIIGIGGFGKVYRAFWI--GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLK-EPNLC   82 (271)
T ss_dssp             TTSEEEEEEEEEETTEEEEEEEET--TEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECC-C--CE
T ss_pred             hhheeeeeeeccCCCeEEEEEEEc--CCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEec-CCceE
Confidence            357888999999999999999985  78899999865432    235678999999999999999999999876 66789


Q ss_pred             EEEeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCC---eeecCCCCCCeEEcc--------CCCe
Q 005257          439 LVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKK---VLHRDIKSSNVLLDK--------EMNG  507 (705)
Q Consensus       439 lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~---iiHrDLkp~NILld~--------~~~~  507 (705)
                      +||||+++++|.+++..    ..+++.+++.++.|++.||.|||+   .+   |+||||||+|||++.        ++.+
T Consensus        83 lv~e~~~~~~L~~~~~~----~~~~~~~~~~i~~~l~~~l~~lH~---~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~  155 (271)
T 3dtc_A           83 LVMEFARGGPLNRVLSG----KRIPPDILVNWAVQIARGMNYLHD---EAIVPIIHRDLKSSNILILQKVENGDLSNKIL  155 (271)
T ss_dssp             EEEECCTTEEHHHHHTS----SCCCHHHHHHHHHHHHHHHHHHHH---SSSSCCCCSCCSGGGEEESSCCSSSCCSSCCE
T ss_pred             EEEEcCCCCCHHHHhhc----CCCCHHHHHHHHHHHHHHHHHHHh---CCCCceeecCCchHHEEEecccccccccCcce
Confidence            99999999999999842    268999999999999999999999   66   999999999999986        6789


Q ss_pred             eeeeeccceecCCCCcceeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhC
Q 005257          508 RLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQG  587 (705)
Q Consensus       508 kL~DFGla~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~  587 (705)
                      ||+|||+++.......   ....||+.|+|||.+.+..++.++||||||+++|||++|+.||......  ...... ...
T Consensus       156 kl~Dfg~~~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~--~~~~~~-~~~  229 (271)
T 3dtc_A          156 KITDFGLAREWHRTTK---MSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGL--AVAYGV-AMN  229 (271)
T ss_dssp             EECCCCC----------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSCHH--HHHHHH-HTS
T ss_pred             EEccCCcccccccccc---cCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH--HHHHhh-hcC
Confidence            9999999986544322   2357899999999999889999999999999999999999999865431  111111 111


Q ss_pred             chhHHHHHhhhcCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHh
Q 005257          588 KLLDALDARLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLEG  638 (705)
Q Consensus       588 ~~~~~id~~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  638 (705)
                      .        ..  ...+......+.+++..||+.||++|||+.|+++.|+.
T Consensus       230 ~--------~~--~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~L~~  270 (271)
T 3dtc_A          230 K--------LA--LPIPSTCPEPFAKLMEDCWNPDPHSRPSFTNILDQLTT  270 (271)
T ss_dssp             C--------CC--CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHC
T ss_pred             C--------CC--CCCCcccCHHHHHHHHHHhcCCcccCcCHHHHHHHHhc
Confidence            1        00  12233445678899999999999999999999999974

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}

Probab=100.00  E-value=4.3e-40  Score=347.94  Aligned_cols=267  Identities=24%  Similarity=0.335  Sum_probs=202.3

Q ss_pred             HhCCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCC-----chhHHHHHHHHHHhccCC---CCCcceeeeeeeec
Q 005257          362 ATKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHEN-----DGGTRAFLAEISSLGRLK---HKSLVGLRGWCKRE  433 (705)
Q Consensus       362 at~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~-----~~~~~~~~~Ei~~l~~l~---Hpniv~l~g~~~~~  433 (705)
                      ..++|+..+.||+|+||+||+|.+..+++.||||++....     ......+.+|+.++++++   ||||++++++|...
T Consensus         7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~   86 (308)
T 3g33_A            7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATS   86 (308)
T ss_dssp             ---CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEEC
T ss_pred             cccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeecc
Confidence            4678999999999999999999999899999999986432     122356777888877775   99999999998764


Q ss_pred             cC----ceEEEEeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeee
Q 005257          434 KG----SLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRL  509 (705)
Q Consensus       434 ~~----~~~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL  509 (705)
                      ..    ..++||||+. |+|.+++...... .+++.++..++.|++.||.|||+   .+|+||||||+|||++.++.+||
T Consensus        87 ~~~~~~~~~lv~e~~~-~~L~~~~~~~~~~-~~~~~~~~~i~~qi~~al~~lH~---~~ivH~Dlkp~Nil~~~~~~~kl  161 (308)
T 3g33_A           87 RTDREIKVTLVFEHVD-QDLRTYLDKAPPP-GLPAETIKDLMRQFLRGLDFLHA---NCIVHRDLKPENILVTSGGTVKL  161 (308)
T ss_dssp             CSSSEEEEEEEEECCC-CBHHHHHHTCCTT-CSCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCTTTEEECTTSCEEE
T ss_pred             CCCCceeEEEEehhhh-cCHHHHHhhccCC-CCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEEcCCCCEEE
Confidence            33    5799999997 5999999765433 59999999999999999999999   99999999999999999999999


Q ss_pred             eeeccceecCCCCcceeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhhCCCCCCCCCccH-HHHHHHHHHhCc
Q 005257          510 GDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNL-VEMVWELMVQGK  588 (705)
Q Consensus       510 ~DFGla~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~-~~~v~~~~~~~~  588 (705)
                      +|||+++.......  .....||+.|+|||++.+..++.++|||||||++|||++|+.||....... ...+........
T Consensus       162 ~Dfg~a~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~  239 (308)
T 3g33_A          162 ADFGLARIYSYQMA--LTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPP  239 (308)
T ss_dssp             CSCSCTTTSTTCCC--SGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCCSSHHHHHHHHHHHHCCCC
T ss_pred             eeCccccccCCCcc--cCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCC
Confidence            99999986643322  233578999999999999899999999999999999999999997654321 111111110000


Q ss_pred             hhH------HHHHhhhcCCCCC-----HHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 005257          589 LLD------ALDARLRAKGGFD-----EDEVERVLHLGLLCAYPDPRARPTMRQVVKV  635 (705)
Q Consensus       589 ~~~------~id~~l~~~~~~~-----~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  635 (705)
                      ...      .............     .+..+.+.+++..||+.||++|||+.|++++
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h  297 (308)
T 3g33_A          240 EDDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQH  297 (308)
T ss_dssp             TTTSCSSCSSCGGGSCCCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred             hhhccchhhccccccCCCCCCcHHHhCccccHHHHHHHHHHhcCCCccCCCHHHHhcC
Confidence            000      0000000000000     1123567899999999999999999999874

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...

Probab=100.00  E-value=7.4e-41  Score=348.30  Aligned_cols=258  Identities=27%  Similarity=0.477  Sum_probs=210.8

Q ss_pred             HhCCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCCchhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEEEE
Q 005257          362 ATKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVY  441 (705)
Q Consensus       362 at~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~lV~  441 (705)
                      ..++|...+.||+|+||.||+|.+. ++..||||++.... ...+.+.+|++++++++||||+++++++.  .+..++||
T Consensus        11 ~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~--~~~~~~v~   86 (279)
T 1qpc_A           11 PRETLKLVERLGAGQFGEVWMGYYN-GHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVVT--QEPIYIIT   86 (279)
T ss_dssp             CGGGEEEEEEEEEETTEEEEEEEET-TTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEEC--SSSCEEEE
T ss_pred             CHHhhhheeeecCCCCeEEEEEEEc-CCcEEEEEEecCCc-ccHHHHHHHHHHHHhCCCcCcceEEEEEc--CCCcEEEE
Confidence            3467888999999999999999986 46789999986543 34678999999999999999999999876  44689999


Q ss_pred             eeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecCCC
Q 005257          442 DYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHG  521 (705)
Q Consensus       442 E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~~~  521 (705)
                      ||+++++|.+++..... ..+++.+++.++.|++.||.|||+   .+|+||||||+||++++++.+||+|||+++.....
T Consensus        87 e~~~~~~L~~~l~~~~~-~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~  162 (279)
T 1qpc_A           87 EYMENGSLVDFLKTPSG-IKLTINKLLDMAAQIAEGMAFIEE---RNYIHRDLRAANILVSDTLSCKIADFGLARLIEDN  162 (279)
T ss_dssp             ECCTTCBHHHHTTSHHH-HTCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTSCEEECCCTTCEECSSS
T ss_pred             ecCCCCCHHHHHhcCCC-CCCCHHHHHHHHHHHHHHHHHHHH---CCeeccCCCHhhEEEcCCCCEEECCCcccccccCc
Confidence            99999999999964321 258999999999999999999998   99999999999999999999999999999877654


Q ss_pred             CcceeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhh-CCCCCCCCCccHHHHHHHHHHhCchhHHHHHhhhcC
Q 005257          522 QVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLS-GRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRAK  600 (705)
Q Consensus       522 ~~~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~Ellt-G~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~l~~~  600 (705)
                      .........++..|+|||++.+..++.++|||||||++|||++ |+.||......   .....+..+.         .  
T Consensus       163 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~---~~~~~~~~~~---------~--  228 (279)
T 1qpc_A          163 EYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNP---EVIQNLERGY---------R--  228 (279)
T ss_dssp             CEECCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHH---HHHHHHHTTC---------C--
T ss_pred             ccccccCCCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcccCHH---HHHHHHhccc---------C--
Confidence            3333333456889999999988889999999999999999999 99999765421   1112222111         1  


Q ss_pred             CCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHhccc
Q 005257          601 GGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLEGKIE  641 (705)
Q Consensus       601 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~  641 (705)
                      ...+......+.+++..||+.||++|||+.++++.|+....
T Consensus       229 ~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~  269 (279)
T 1qpc_A          229 MVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFT  269 (279)
T ss_dssp             CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             CCCcccccHHHHHHHHHHhccChhhCCCHHHHHHHHHHHHH
Confidence            11222344678899999999999999999999999997765

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}

Probab=100.00  E-value=2.8e-40  Score=343.71  Aligned_cols=250  Identities=25%  Similarity=0.394  Sum_probs=185.3

Q ss_pred             CCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCC---chhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEEE
Q 005257          364 KGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHEN---DGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLV  440 (705)
Q Consensus       364 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~---~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~lV  440 (705)
                      ++|...+.||+|+||.||+|....+++.||||++....   ....+.+.+|+.++++++||||+++++++.. .+..++|
T Consensus        11 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~lv   89 (278)
T 3cok_A           11 EDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFED-SNYVYLV   89 (278)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEEC-SSEEEEE
T ss_pred             ccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEcc-CCeEEEE
Confidence            46888999999999999999998889999999986432   2234678999999999999999999999876 6789999


Q ss_pred             EeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecCC
Q 005257          441 YDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGH  520 (705)
Q Consensus       441 ~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~~  520 (705)
                      |||+++++|.+++....  ..+++.+++.++.|++.||.|||+   .+++||||||+||+++.++.+||+|||++.....
T Consensus        90 ~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~  164 (278)
T 3cok_A           90 LEMCHNGEMNRYLKNRV--KPFSENEARHFMHQIITGMLYLHS---HGILHRDLTLSNLLLTRNMNIKIADFGLATQLKM  164 (278)
T ss_dssp             EECCTTEEHHHHHHTCS--SCCCHHHHHHHHHHHHHHHHHHHH---TTEECSSCCGGGEEECTTCCEEECCCTTCEECC-
T ss_pred             EecCCCCcHHHHHhhcc--CCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEEcCCCCEEEEeecceeeccC
Confidence            99999999999997543  368999999999999999999998   9999999999999999999999999999987653


Q ss_pred             CCcceeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhHHHHHhhhcC
Q 005257          521 GQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRAK  600 (705)
Q Consensus       521 ~~~~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~l~~~  600 (705)
                      .... .....||+.|+|||.+.+..++.++|||||||++|||++|+.||.......               .+.......
T Consensus       165 ~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~---------------~~~~~~~~~  228 (278)
T 3cok_A          165 PHEK-HYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKN---------------TLNKVVLAD  228 (278)
T ss_dssp             ----------------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC--------------------CCSSC
T ss_pred             CCCc-ceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhHHH---------------HHHHHhhcc
Confidence            3222 223578999999999998889999999999999999999999997643210               000000000


Q ss_pred             CCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 005257          601 GGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKV  635 (705)
Q Consensus       601 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  635 (705)
                      ...+......+.+++.+||+.||++|||+.+++++
T Consensus       229 ~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h  263 (278)
T 3cok_A          229 YEMPSFLSIEAKDLIHQLLRRNPADRLSLSSVLDH  263 (278)
T ss_dssp             CCCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred             cCCccccCHHHHHHHHHHcccCHhhCCCHHHHhcC
Confidence            11222234567899999999999999999998873

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*

Probab=100.00  E-value=2.5e-40  Score=346.84  Aligned_cols=257  Identities=28%  Similarity=0.394  Sum_probs=208.5

Q ss_pred             hCCCCcce-EEeecCceEEEEEEE--cCCCeEEEEEEeccCC--chhHHHHHHHHHHhccCCCCCcceeeeeeeeccCce
Q 005257          363 TKGFSEEN-VIGVGGNGKVYKGVL--EGGGAEIAVKRISHEN--DGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSL  437 (705)
Q Consensus       363 t~~f~~~~-~LG~G~fg~Vy~~~~--~~~~~~vavK~i~~~~--~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~  437 (705)
                      .++|...+ .||+|+||.||+|.+  ..+++.||||+++...  ....+.+.+|+++++.++||||+++++++.  .+..
T Consensus        15 ~~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~--~~~~   92 (291)
T 1xbb_A           15 RKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICE--AESW   92 (291)
T ss_dssp             GGGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEEE--SSSE
T ss_pred             chhhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEC--CCCc
Confidence            45677777 999999999999955  4567899999997553  334678999999999999999999999983  5678


Q ss_pred             EEEEeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeecccee
Q 005257          438 MLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARM  517 (705)
Q Consensus       438 ~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~  517 (705)
                      ++||||+++++|.+++....   .+++.+++.++.|++.||.|||+   .+|+||||||+|||++.++.+||+|||+++.
T Consensus        93 ~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~i~~qi~~~l~~LH~---~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~  166 (291)
T 1xbb_A           93 MLVMEMAELGPLNKYLQQNR---HVKDKNIIELVHQVSMGMKYLEE---SNFVHRDLAARNVLLVTQHYAKISDFGLSKA  166 (291)
T ss_dssp             EEEEECCTTEEHHHHHHHCT---TCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEEETTEEEECCCTTCEE
T ss_pred             EEEEEeCCCCCHHHHHHhCc---CCCHHHHHHHHHHHHHHHHHHHh---CCeEcCCCCcceEEEeCCCcEEEccCCccee
Confidence            99999999999999997643   58999999999999999999999   9999999999999999999999999999987


Q ss_pred             cCCCCcce--eeeeeccccCCCccccccCCCCccccEEEEehhHHHHhh-CCCCCCCCCccHHHHHHHHHHhCchhHHHH
Q 005257          518 HGHGQVAS--TTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLS-GRRPIEEGKPNLVEMVWELMVQGKLLDALD  594 (705)
Q Consensus       518 ~~~~~~~~--~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~Ellt-G~~Pf~~~~~~~~~~v~~~~~~~~~~~~id  594 (705)
                      ........  .....+++.|+|||.+.+..++.++||||||+++|||++ |+.||......   .+...+..+..     
T Consensus       167 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~---~~~~~~~~~~~-----  238 (291)
T 1xbb_A          167 LRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGS---EVTAMLEKGER-----  238 (291)
T ss_dssp             CCTTCSEEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHH---HHHHHHHTTCC-----
T ss_pred             eccCCCcccccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCCHH---HHHHHHHcCCC-----
Confidence            75543322  122346789999999988889999999999999999999 99999865431   12222222211     


Q ss_pred             HhhhcCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHhccc
Q 005257          595 ARLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLEGKIE  641 (705)
Q Consensus       595 ~~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~  641 (705)
                            ...+......+.+++..||+.||++||++.++++.|+....
T Consensus       239 ------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~  279 (291)
T 1xbb_A          239 ------MGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYY  279 (291)
T ss_dssp             ------CCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHH
T ss_pred             ------CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence                  22233445678999999999999999999999999987654

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*

Probab=100.00  E-value=2.3e-40  Score=353.85  Aligned_cols=267  Identities=25%  Similarity=0.413  Sum_probs=215.3

Q ss_pred             HHHHHhCCCCcceEEeecCceEEEEEEEcCCC-----eEEEEEEeccCCc-hhHHHHHHHHHHhccC-CCCCcceeeeee
Q 005257          358 EIEAATKGFSEENVIGVGGNGKVYKGVLEGGG-----AEIAVKRISHEND-GGTRAFLAEISSLGRL-KHKSLVGLRGWC  430 (705)
Q Consensus       358 el~~at~~f~~~~~LG~G~fg~Vy~~~~~~~~-----~~vavK~i~~~~~-~~~~~~~~Ei~~l~~l-~Hpniv~l~g~~  430 (705)
                      +++...++|...+.||+|+||.||+|.+..++     ..||+|.+..... ...+.+.+|+.++.++ +||||++++++|
T Consensus        40 ~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~  119 (333)
T 2i1m_A           40 KWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGAC  119 (333)
T ss_dssp             GGBCCTTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred             cccCCHHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEEEE
Confidence            34556678999999999999999999987655     3799999976543 3456799999999999 899999999998


Q ss_pred             eeccCceEEEEeeCCCCChhHHHHhcCC-----------CCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCe
Q 005257          431 KREKGSLMLVYDYMENGSLDKWIFQCDG-----------SMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNV  499 (705)
Q Consensus       431 ~~~~~~~~lV~E~~~~gsL~~~L~~~~~-----------~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NI  499 (705)
                      .. .+..++||||+++|+|.+++.....           ...+++.+++.++.|++.||.|||+   .+|+||||||+||
T Consensus       120 ~~-~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~Dlkp~NI  195 (333)
T 2i1m_A          120 TH-GGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLAS---KNCIHRDVAARNV  195 (333)
T ss_dssp             CS-SSSCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGC
T ss_pred             ec-CCceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhc---CCcccCCcccceE
Confidence            76 6688999999999999999975321           2358999999999999999999999   9999999999999


Q ss_pred             EEccCCCeeeeeeccceecCCCCcc-eeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhh-CCCCCCCCCccHH
Q 005257          500 LLDKEMNGRLGDFGLARMHGHGQVA-STTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLS-GRRPIEEGKPNLV  577 (705)
Q Consensus       500 Lld~~~~~kL~DFGla~~~~~~~~~-~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~Ellt-G~~Pf~~~~~~~~  577 (705)
                      |++.++.+||+|||+++........ ......||+.|+|||++.+..++.++|||||||++|||++ |..||......  
T Consensus       196 l~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~--  273 (333)
T 2i1m_A          196 LLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVN--  273 (333)
T ss_dssp             EEEGGGEEEBCCCGGGCCGGGCTTSEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCSS--
T ss_pred             EECCCCeEEECccccccccccccceeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCCcccchh--
Confidence            9999999999999999866443322 2233567889999999998899999999999999999998 99999765432  


Q ss_pred             HHHHHHHHhCchhHHHHHhhhcCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHhccc
Q 005257          578 EMVWELMVQGKLLDALDARLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLEGKIE  641 (705)
Q Consensus       578 ~~v~~~~~~~~~~~~id~~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~  641 (705)
                      .........+         ..  ...+......+.+++..||+.||.+|||+.++++.|+....
T Consensus       274 ~~~~~~~~~~---------~~--~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~  326 (333)
T 2i1m_A          274 SKFYKLVKDG---------YQ--MAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQEQAQ  326 (333)
T ss_dssp             HHHHHHHHHT---------CC--CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             HHHHHHHhcC---------CC--CCCCCCCCHHHHHHHHHHhccChhhCcCHHHHHHHHHHHHH
Confidence            1111221111         11  11122234678899999999999999999999999986654

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=3.5e-40  Score=353.12  Aligned_cols=258  Identities=29%  Similarity=0.510  Sum_probs=203.4

Q ss_pred             CCCCcceEEeecCceEEEEEEEcCCC----eEEEEEEeccCCc-hhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceE
Q 005257          364 KGFSEENVIGVGGNGKVYKGVLEGGG----AEIAVKRISHEND-GGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLM  438 (705)
Q Consensus       364 ~~f~~~~~LG~G~fg~Vy~~~~~~~~----~~vavK~i~~~~~-~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~  438 (705)
                      ++|...+.||+|+||.||+|.+..++    ..||||++..... .....+.+|+.++++++||||+++++++.. .+..+
T Consensus        44 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-~~~~~  122 (333)
T 1mqb_A           44 SCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISK-YKPMM  122 (333)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECS-SSSEE
T ss_pred             HHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEec-CCCcE
Confidence            45667899999999999999986543    4699999976533 345678999999999999999999999876 67899


Q ss_pred             EEEeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceec
Q 005257          439 LVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMH  518 (705)
Q Consensus       439 lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~  518 (705)
                      +||||+++|+|.+++.....  .+++.+++.++.|++.||.|||+   .+|+||||||+|||++.++.+||+|||+++..
T Consensus       123 lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~  197 (333)
T 1mqb_A          123 IITEYMENGALDKFLREKDG--EFSVLQLVGMLRGIAAGMKYLAN---MNYVHRDLAARNILVNSNLVCKVSDFGLSRVL  197 (333)
T ss_dssp             EEEECCTTEEHHHHHHHTTT--CSCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTCCEEECCCCC----
T ss_pred             EEEeCCCCCcHHHHHHhCCC--CCCHHHHHHHHHHHHHHHHHHHh---CCeeCCCCChheEEECCCCcEEECCCCcchhh
Confidence            99999999999999976433  68999999999999999999999   99999999999999999999999999999876


Q ss_pred             CCCCcce--eeeeeccccCCCccccccCCCCccccEEEEehhHHHHhh-CCCCCCCCCccHHHHHHHHHHhCchhHHHHH
Q 005257          519 GHGQVAS--TTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLS-GRRPIEEGKPNLVEMVWELMVQGKLLDALDA  595 (705)
Q Consensus       519 ~~~~~~~--~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~Ellt-G~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~  595 (705)
                      .......  .....+|+.|+|||++.+..++.++|||||||++|||++ |+.||......   .+...+..+.       
T Consensus       198 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~---~~~~~~~~~~-------  267 (333)
T 1mqb_A          198 EDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNH---EVMKAINDGF-------  267 (333)
T ss_dssp             -------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH---HHHHHHHTTC-------
T ss_pred             ccccccccccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccCCHH---HHHHHHHCCC-------
Confidence            5432211  222356789999999998899999999999999999998 99999764421   1222222221       


Q ss_pred             hhhcCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHhccc
Q 005257          596 RLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLEGKIE  641 (705)
Q Consensus       596 ~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~  641 (705)
                        .  ...+......+.+++..||+.||++||++.++++.|+....
T Consensus       268 --~--~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~  309 (333)
T 1mqb_A          268 --R--LPTPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKLIR  309 (333)
T ss_dssp             --C--CCCCTTCBHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHH
T ss_pred             --c--CCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHh
Confidence              1  11223345678899999999999999999999999987765

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A

Probab=100.00  E-value=3.3e-40  Score=357.44  Aligned_cols=252  Identities=23%  Similarity=0.288  Sum_probs=195.1

Q ss_pred             hCCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCCchhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEEEEe
Q 005257          363 TKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYD  442 (705)
Q Consensus       363 t~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~lV~E  442 (705)
                      .++|...+.||+|+||+||++.+..+++.||||++.... ...+.+.+|+.+++.++||||+++++++.. ...+++|||
T Consensus        19 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~~~lv~e   96 (361)
T 3uc3_A           19 SDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGA-AIDENVQREIINHRSLRHPNIVRFKEVILT-PTHLAIIME   96 (361)
T ss_dssp             TTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESST-TSCHHHHHHHHHHHHCCCTTBCCEEEEEEC-SSEEEEEEE
T ss_pred             CCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCc-cccHHHHHHHHHHHhCCCCCCCcEEEEEee-CCEEEEEEE
Confidence            467999999999999999999999999999999996543 334678899999999999999999999876 678999999


Q ss_pred             eCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCC--eeeeeeccceecCC
Q 005257          443 YMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMN--GRLGDFGLARMHGH  520 (705)
Q Consensus       443 ~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~--~kL~DFGla~~~~~  520 (705)
                      |+++|+|.+++....   .+++.++..++.|++.||.|||+   ++|+||||||+|||++.++.  +||+|||+++....
T Consensus        97 ~~~~~~L~~~l~~~~---~~~~~~~~~i~~ql~~~L~~LH~---~~ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~~~  170 (361)
T 3uc3_A           97 YASGGELYERICNAG---RFSEDEARFFFQQLLSGVSYCHS---MQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVL  170 (361)
T ss_dssp             CCCSCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHH---TTCCSCCCCGGGEEECSSSSCCEEECCCCCC-----
T ss_pred             eCCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEEcCCCCceEEEeecCccccccc
Confidence            999999999997643   59999999999999999999998   99999999999999987765  99999999975432


Q ss_pred             CCcceeeeeeccccCCCccccccCCCCcc-ccEEEEehhHHHHhhCCCCCCCCCc--cHHHHHHHHHHhCchhHHHHHhh
Q 005257          521 GQVASTTRVVGTVGYLAPEVFSSGRASTQ-TDVFGFGILILEVLSGRRPIEEGKP--NLVEMVWELMVQGKLLDALDARL  597 (705)
Q Consensus       521 ~~~~~~~~~~gt~~y~APE~~~~~~~s~k-sDVwS~Gvvl~ElltG~~Pf~~~~~--~~~~~v~~~~~~~~~~~~id~~l  597 (705)
                      ..  ......||+.|+|||++.+..++.+ +|||||||++|||++|+.||.....  .....+ ..+....        .
T Consensus       171 ~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~-~~~~~~~--------~  239 (361)
T 3uc3_A          171 HS--QPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTI-QRILSVK--------Y  239 (361)
T ss_dssp             ------------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----CCCHHHHH-HHHHTTC--------C
T ss_pred             cC--CCCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccHHHHHHHH-HHHhcCC--------C
Confidence            22  2233579999999999988777655 8999999999999999999976432  111111 1111110        0


Q ss_pred             hcCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 005257          598 RAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKV  635 (705)
Q Consensus       598 ~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  635 (705)
                      .  ..........+.+++..||+.||++|||+.|++++
T Consensus       240 ~--~~~~~~~s~~~~~li~~~L~~dP~~Rps~~ell~h  275 (361)
T 3uc3_A          240 S--IPDDIRISPECCHLISRIFVADPATRISIPEIKTH  275 (361)
T ss_dssp             C--CCTTSCCCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred             C--CCCcCCCCHHHHHHHHHHccCChhHCcCHHHHHhC
Confidence            0  00011223567899999999999999999999885

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}

Probab=100.00  E-value=8.5e-40  Score=342.68  Aligned_cols=254  Identities=25%  Similarity=0.375  Sum_probs=204.8

Q ss_pred             CCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCCchhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEEEEeeC
Q 005257          365 GFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYM  444 (705)
Q Consensus       365 ~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~lV~E~~  444 (705)
                      +|....+||+|+||.||+|.+..+++.||||++........+.+.+|+.+++.++||||+++++++.. .+..++||||+
T Consensus        23 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~lv~e~~  101 (295)
T 2clq_A           23 ENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSE-NGFIKIFMEQV  101 (295)
T ss_dssp             TTSSBCEEEECSSSEEEEEEETTTCCEEEEEEEECCCC---HHHHHHHHHHHTCCCTTBCCEEEEEEE-TTEEEEEEECC
T ss_pred             CCCCcEEEeecCcEEEEEEEECCCCeEEEEEEccCCchHHHHHHHHHHHHHHhCCCCCEeeEeeEEEe-CCcEEEEEEeC
Confidence            45566799999999999999998999999999987766667889999999999999999999999876 67899999999


Q ss_pred             CCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEcc-CCCeeeeeeccceecCCCCc
Q 005257          445 ENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDK-EMNGRLGDFGLARMHGHGQV  523 (705)
Q Consensus       445 ~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~-~~~~kL~DFGla~~~~~~~~  523 (705)
                      ++++|.+++........+++..+..++.|++.||.|||+   .+++||||||+||+++. ++.+||+|||+++.......
T Consensus       102 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~~~~  178 (295)
T 2clq_A          102 PGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHD---NQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINP  178 (295)
T ss_dssp             SEEEHHHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEEETTTCCEEECCTTTCEESCC---
T ss_pred             CCCCHHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHh---CCEEccCCChhhEEEECCCCCEEEeecccccccCCCCC
Confidence            999999999876544467899999999999999999998   99999999999999987 89999999999987654322


Q ss_pred             ceeeeeeccccCCCccccccCC--CCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhHHHHHhhhcCC
Q 005257          524 ASTTRVVGTVGYLAPEVFSSGR--ASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRAKG  601 (705)
Q Consensus       524 ~~~~~~~gt~~y~APE~~~~~~--~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~l~~~~  601 (705)
                       ......||+.|+|||++.+..  ++.++|||||||++|||++|+.||........... ...           ......
T Consensus       179 -~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~-~~~-----------~~~~~~  245 (295)
T 2clq_A          179 -CTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMF-KVG-----------MFKVHP  245 (295)
T ss_dssp             ---CCCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSHHHHHH-HHH-----------HHCCCC
T ss_pred             -cccccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCchhHHHH-hhc-----------cccccc
Confidence             223357899999999987643  88999999999999999999999975332211110 000           001112


Q ss_pred             CCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 005257          602 GFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKV  635 (705)
Q Consensus       602 ~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  635 (705)
                      ..+......+.+++..||+.||++||++.++++.
T Consensus       246 ~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~  279 (295)
T 2clq_A          246 EIPESMSAEAKAFILKCFEPDPDKRACANDLLVD  279 (295)
T ss_dssp             CCCTTSCHHHHHHHHHTTCSSTTTSCCHHHHHTS
T ss_pred             cccccCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence            2333445678899999999999999999999863

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*

Probab=100.00  E-value=7.3e-40  Score=341.46  Aligned_cols=253  Identities=23%  Similarity=0.330  Sum_probs=207.7

Q ss_pred             hCCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccC--CchhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEEE
Q 005257          363 TKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHE--NDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLV  440 (705)
Q Consensus       363 t~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~--~~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~lV  440 (705)
                      .++|+..+.||+|+||.||+|.+..+++.||+|++...  .....+.+.+|+.++++++||||+++++++.. .+..++|
T Consensus         5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~~v   83 (284)
T 3kk8_A            5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQE-ESFHYLV   83 (284)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEC-SSEEEEE
T ss_pred             hhhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEc-CCEEEEE
Confidence            46789999999999999999999999999999998654  33445778899999999999999999999876 6788999


Q ss_pred             EeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCC---eeeeeecccee
Q 005257          441 YDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMN---GRLGDFGLARM  517 (705)
Q Consensus       441 ~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~---~kL~DFGla~~  517 (705)
                      |||+++++|.+++....   .+++.++..++.|++.||.|||+   .+|+||||||+||+++.++.   +||+|||++..
T Consensus        84 ~e~~~~~~l~~~~~~~~---~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~  157 (284)
T 3kk8_A           84 FDLVTGGELFEDIVARE---FYSEADASHCIQQILESIAYCHS---NGIVHRNLKPENLLLASKAKGAAVKLADFGLAIE  157 (284)
T ss_dssp             ECCCCSCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEESSSSTTCCEEECCCTTCEE
T ss_pred             EecCCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHH---CCcCcCCCCHHHEEEecCCCCCcEEEeeceeeEE
Confidence            99999999999887643   68999999999999999999999   99999999999999987655   99999999987


Q ss_pred             cCCCCcceeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhHHHHHhh
Q 005257          518 HGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDARL  597 (705)
Q Consensus       518 ~~~~~~~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~l  597 (705)
                      ......  .....||+.|+|||++.+..++.++||||||+++|||++|+.||......   .....+..+....      
T Consensus       158 ~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~---~~~~~~~~~~~~~------  226 (284)
T 3kk8_A          158 VNDSEA--WHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQH---RLYAQIKAGAYDY------  226 (284)
T ss_dssp             CCSSCB--CCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH---HHHHHHHHTCCCC------
T ss_pred             cccCcc--ccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCCchh---HHHHHHHhccccC------
Confidence            654332  23357899999999999989999999999999999999999999765431   1112222211100      


Q ss_pred             hcCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 005257          598 RAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKV  635 (705)
Q Consensus       598 ~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  635 (705)
                        ...........+.+++..||+.||++|||+.|++++
T Consensus       227 --~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h  262 (284)
T 3kk8_A          227 --PSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALKV  262 (284)
T ss_dssp             --CTTTTTTSCHHHHHHHHHHSCSSTTTSCCHHHHTTS
T ss_pred             --CchhhcccCHHHHHHHHHHcccChhhCCCHHHHhcC
Confidence              000011234568899999999999999999999884

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*

Probab=100.00  E-value=7.4e-40  Score=366.36  Aligned_cols=260  Identities=22%  Similarity=0.292  Sum_probs=199.3

Q ss_pred             hCCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccC--CchhHHHHHHHHHHhccCCCCCcceeeeeeeecc-----C
Q 005257          363 TKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHE--NDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREK-----G  435 (705)
Q Consensus       363 t~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~--~~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~-----~  435 (705)
                      .++|+..+.||+|+||+||+|.+..+++.||||++...  .....+.+.+|+.+++.++||||+++++++...+     .
T Consensus        61 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~  140 (464)
T 3ttj_A           61 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQ  140 (464)
T ss_dssp             ETTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCC
T ss_pred             cCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccCC
Confidence            56899999999999999999999999999999999754  3345677899999999999999999999886432     4


Q ss_pred             ceEEEEeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccc
Q 005257          436 SLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLA  515 (705)
Q Consensus       436 ~~~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla  515 (705)
                      .+++||||+++ +|.+.+..     .+++.++..++.||+.||.|||+   .+|+||||||+|||++.++.+||+|||++
T Consensus       141 ~~~lv~E~~~~-~l~~~~~~-----~l~~~~~~~~~~qil~aL~~lH~---~~iiHrDlkp~NIll~~~~~~kl~DFG~a  211 (464)
T 3ttj_A          141 DVYLVMELMDA-NLCQVIQM-----ELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLA  211 (464)
T ss_dssp             EEEEEEECCSE-EHHHHHTS-----CCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTSCEEECCCCCC
T ss_pred             eEEEEEeCCCC-CHHHHHhh-----cCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCChHhEEEeCCCCEEEEEEEee
Confidence            57999999976 56666632     48999999999999999999999   99999999999999999999999999999


Q ss_pred             eecCCCCcceeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHH-hCch-----
Q 005257          516 RMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMV-QGKL-----  589 (705)
Q Consensus       516 ~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~-~~~~-----  589 (705)
                      +......  ..+..+||+.|+|||++.+..++.++|||||||++|||++|+.||.+...  .+.....+. .|..     
T Consensus       212 ~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~~~--~~~~~~i~~~lg~p~~~~~  287 (464)
T 3ttj_A          212 RTAGTSF--MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDY--IDQWNKVIEQLGTPCPEFM  287 (464)
T ss_dssp             -----CC--CC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSH--HHHHHHHHHHHCSCCHHHH
T ss_pred             eecCCCc--ccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCCCH--HHHHHHHHHhcCCCCHHHH
Confidence            8765432  23446899999999999999999999999999999999999999986542  111111111 1110     


Q ss_pred             ---hHHHHHhhhcC---CCC-----------------CHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 005257          590 ---LDALDARLRAK---GGF-----------------DEDEVERVLHLGLLCAYPDPRARPTMRQVVKV  635 (705)
Q Consensus       590 ---~~~id~~l~~~---~~~-----------------~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  635 (705)
                         .......+...   ...                 .......+.+++..||+.||++|||+.|++++
T Consensus       288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~H  356 (464)
T 3ttj_A          288 KKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQH  356 (464)
T ss_dssp             TTSCHHHHHHHTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred             HHcchhhhhHhhcccccCCCChHHhCcccccccccccccccCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence               00000000000   000                 01124678999999999999999999999985

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*

Probab=100.00  E-value=2.4e-40  Score=359.94  Aligned_cols=245  Identities=24%  Similarity=0.307  Sum_probs=194.5

Q ss_pred             CCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCC---chhHHHHHHHHHH-hccCCCCCcceeeeeeeeccCceEE
Q 005257          364 KGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHEN---DGGTRAFLAEISS-LGRLKHKSLVGLRGWCKREKGSLML  439 (705)
Q Consensus       364 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~---~~~~~~~~~Ei~~-l~~l~Hpniv~l~g~~~~~~~~~~l  439 (705)
                      ++|...+.||+|+||.||+|+++.+++.||||+++...   ....+.+.+|..+ ++.++||||+++++++.. .+.+++
T Consensus        38 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~-~~~~~l  116 (373)
T 2r5t_A           38 SDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQT-ADKLYF  116 (373)
T ss_dssp             GGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEEC-SSEEEE
T ss_pred             hheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEe-CCEEEE
Confidence            46888999999999999999999999999999997642   2334566778777 577899999999998876 678999


Q ss_pred             EEeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecC
Q 005257          440 VYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHG  519 (705)
Q Consensus       440 V~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~  519 (705)
                      ||||+++|+|.+++.+..   .+++..+..++.||+.||.|||+   ++|+||||||+|||++.++.+||+|||+++...
T Consensus       117 v~E~~~gg~L~~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH~---~givHrDlkp~NIll~~~g~ikL~DFG~a~~~~  190 (373)
T 2r5t_A          117 VLDYINGGELFYHLQRER---CFLEPRARFYAAEIASALGYLHS---LNIVYRDLKPENILLDSQGHIVLTDFGLCKENI  190 (373)
T ss_dssp             EEECCCSCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTSCEEECCCCBCGGGB
T ss_pred             EEeCCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHH---CCceecCCCHHHEEECCCCCEEEeeCccccccc
Confidence            999999999999997643   58999999999999999999998   999999999999999999999999999998643


Q ss_pred             CCCcceeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhHHHHHhhhc
Q 005257          520 HGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRA  599 (705)
Q Consensus       520 ~~~~~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~l~~  599 (705)
                      .... .....+||+.|+|||++.+..++.++|||||||++|||++|+.||.....   ......+..+.           
T Consensus       191 ~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~---~~~~~~i~~~~-----------  255 (373)
T 2r5t_A          191 EHNS-TTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNT---AEMYDNILNKP-----------  255 (373)
T ss_dssp             CCCC-CCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSBH---HHHHHHHHHSC-----------
T ss_pred             cCCC-ccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCH---HHHHHHHHhcc-----------
Confidence            3221 23346899999999999999999999999999999999999999976442   11122222111           


Q ss_pred             CCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHH
Q 005257          600 KGGFDEDEVERVLHLGLLCAYPDPRARPTMRQ  631 (705)
Q Consensus       600 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~e  631 (705)
                       ..++......+.+++..||+.||.+||++.+
T Consensus       256 -~~~~~~~~~~~~~li~~lL~~dp~~R~~~~~  286 (373)
T 2r5t_A          256 -LQLKPNITNSARHLLEGLLQKDRTKRLGAKD  286 (373)
T ss_dssp             -CCCCSSSCHHHHHHHHHHTCSSGGGSTTTTT
T ss_pred             -cCCCCCCCHHHHHHHHHHcccCHHhCCCCCC
Confidence             1222333456889999999999999999853

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*

Probab=100.00  E-value=7.7e-40  Score=346.14  Aligned_cols=262  Identities=23%  Similarity=0.365  Sum_probs=201.4

Q ss_pred             CCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccC---CchhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEEE
Q 005257          364 KGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHE---NDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLV  440 (705)
Q Consensus       364 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~---~~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~lV  440 (705)
                      ++|...+.||+|+||.||+|....+++.||||++...   .....+.+.+|+.++++++||||+++++++.. .+..++|
T Consensus        32 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~lv  110 (310)
T 2wqm_A           32 ANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIE-DNELNIV  110 (310)
T ss_dssp             GGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEE-TTEEEEE
T ss_pred             cceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEc-CCcEEEE
Confidence            4688899999999999999999888999999999753   23455678999999999999999999999886 6789999


Q ss_pred             EeeCCCCChhHHHHhcC-CCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecC
Q 005257          441 YDYMENGSLDKWIFQCD-GSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHG  519 (705)
Q Consensus       441 ~E~~~~gsL~~~L~~~~-~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~  519 (705)
                      |||+++++|.+++.... ....+++.+++.++.|++.||.|||+   .+++||||||+||+++.++.+||+|||+++...
T Consensus       111 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~---~~i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~~  187 (310)
T 2wqm_A          111 LELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHS---RRVMHRDIKPANVFITATGVVKLGDLGLGRFFS  187 (310)
T ss_dssp             EECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTSCEEECCC-------
T ss_pred             EecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHhh---CCeeCCCCcHHHEEEcCCCCEEEEeccceeeec
Confidence            99999999999996521 22368999999999999999999998   999999999999999999999999999998664


Q ss_pred             CCCcceeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhHHHHHhhhc
Q 005257          520 HGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRA  599 (705)
Q Consensus       520 ~~~~~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~l~~  599 (705)
                      .... ......|++.|+|||++.+..++.++|||||||++|||++|+.||........... ..+..+...         
T Consensus       188 ~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~-~~~~~~~~~---------  256 (310)
T 2wqm_A          188 SKTT-AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLC-KKIEQCDYP---------  256 (310)
T ss_dssp             ------------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC---CCHHHHH-HHHHTTCSC---------
T ss_pred             CCCc-cccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchhHHHHH-HHhhcccCC---------
Confidence            4322 22335789999999999998999999999999999999999999976543322221 112221111         


Q ss_pred             CCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHhccc
Q 005257          600 KGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLEGKIE  641 (705)
Q Consensus       600 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~  641 (705)
                       ..........+.+++..||+.||++|||+.++++.|+.+..
T Consensus       257 -~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~il~~l~~l~~  297 (310)
T 2wqm_A          257 -PLPSDHYSEELRQLVNMCINPDPEKRPDVTYVYDVAKRMHA  297 (310)
T ss_dssp             -CCCTTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             -CCcccccCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHH
Confidence             01112234568899999999999999999999999987755

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A

Probab=100.00  E-value=5.1e-40  Score=344.09  Aligned_cols=261  Identities=28%  Similarity=0.406  Sum_probs=199.2

Q ss_pred             CCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCCc--hhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEEEE
Q 005257          364 KGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHEND--GGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVY  441 (705)
Q Consensus       364 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~--~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~lV~  441 (705)
                      ++|...+.||+|+||+||+|.+ .+++.||+|++.....  ...+.+.+|++++++++||||+++++++.. ++..++||
T Consensus         2 ~~y~~~~~lg~G~~g~V~~~~~-~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-~~~~~lv~   79 (288)
T 1ob3_A            2 EKYHGLEKIGEGTYGVVYKAQN-NYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHT-KKRLVLVF   79 (288)
T ss_dssp             CSEEEEEEEEEETTEEEEEEEE-TTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEEC-SSCEEEEE
T ss_pred             ccchhhhhcccCCCEEEEEEEc-CCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEcc-CCeEEEEE
Confidence            4688899999999999999998 5688999999865532  234778999999999999999999999876 67899999


Q ss_pred             eeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecCCC
Q 005257          442 DYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHG  521 (705)
Q Consensus       442 E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~~~  521 (705)
                      ||+++ +|.+++.....  .+++.++..++.|++.||.|||+   ++|+||||||+|||++.++.+||+|||+++.....
T Consensus        80 e~~~~-~l~~~~~~~~~--~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~  153 (288)
T 1ob3_A           80 EHLDQ-DLKKLLDVCEG--GLESVTAKSFLLQLLNGIAYCHD---RRVLHRDLKPQNLLINREGELKIADFGLARAFGIP  153 (288)
T ss_dssp             ECCSE-EHHHHHHTSTT--CCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC-
T ss_pred             EecCC-CHHHHHHhccc--CCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEEcCCCCEEEeECccccccCcc
Confidence            99975 99999876433  58999999999999999999999   99999999999999999999999999999866432


Q ss_pred             CcceeeeeeccccCCCcccccc-CCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHh-CchhH--------
Q 005257          522 QVASTTRVVGTVGYLAPEVFSS-GRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQ-GKLLD--------  591 (705)
Q Consensus       522 ~~~~~~~~~gt~~y~APE~~~~-~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~-~~~~~--------  591 (705)
                      .. ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||......  +........ +....        
T Consensus       154 ~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~  230 (288)
T 1ob3_A          154 VR-KYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEA--DQLMRIFRILGTPNSKNWPNVTE  230 (288)
T ss_dssp             ---------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH--HHHHHHHHHHCCCCTTTSTTGGG
T ss_pred             cc-ccccccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH--HHHHHHHHHHCCCChhhchhhhc
Confidence            22 2233578999999999876 45899999999999999999999999765421  111111110 00000        


Q ss_pred             --HHHHhhhcCC-----CCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 005257          592 --ALDARLRAKG-----GFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKV  635 (705)
Q Consensus       592 --~id~~l~~~~-----~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  635 (705)
                        ..++......     .........+.+++..||+.||++|||+.|++++
T Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h  281 (288)
T 1ob3_A          231 LPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEH  281 (288)
T ss_dssp             STTCCTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred             ccccccccccccCccHHHHhhhcCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence              0000000000     0011233567899999999999999999999864

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A

Probab=100.00  E-value=2.5e-39  Score=344.32  Aligned_cols=249  Identities=24%  Similarity=0.347  Sum_probs=207.5

Q ss_pred             hCCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCCch------hHHHHHHHHHHhccCCCCCcceeeeeeeeccCc
Q 005257          363 TKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDG------GTRAFLAEISSLGRLKHKSLVGLRGWCKREKGS  436 (705)
Q Consensus       363 t~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~~------~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~  436 (705)
                      .++|...+.||+|+||.||+|.+..+++.||||++......      ..+.+.+|+.++..++||||+++++++.. ...
T Consensus        11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-~~~   89 (321)
T 2a2a_A           11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYEN-RTD   89 (321)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEEC-SSE
T ss_pred             hccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEec-CCE
Confidence            45688899999999999999999999999999998764321      35779999999999999999999999876 678


Q ss_pred             eEEEEeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCC----Ceeeeee
Q 005257          437 LMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEM----NGRLGDF  512 (705)
Q Consensus       437 ~~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~----~~kL~DF  512 (705)
                      .++||||+++++|.+++....   .+++.+++.++.|++.||.|||+   .+|+||||||+|||++.++    .+||+||
T Consensus        90 ~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~i~~qi~~aL~~lH~---~~ivH~dikp~NIl~~~~~~~~~~~kl~Df  163 (321)
T 2a2a_A           90 VVLILELVSGGELFDFLAQKE---SLSEEEATSFIKQILDGVNYLHT---KKIAHFDLKPENIMLLDKNIPIPHIKLIDF  163 (321)
T ss_dssp             EEEEECCCCSCBHHHHHHTCS---CEEHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEESCTTSSSCCEEECCC
T ss_pred             EEEEEEcCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCChHHEEEecCCCCcCCEEEccC
Confidence            999999999999999997532   68999999999999999999999   9999999999999999887    7999999


Q ss_pred             ccceecCCCCcceeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhHH
Q 005257          513 GLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDA  592 (705)
Q Consensus       513 Gla~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~~  592 (705)
                      |+++.......  .....||+.|+|||++.+..++.++|||||||++|||++|+.||......  + ....+..+.    
T Consensus       164 g~~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~--~-~~~~i~~~~----  234 (321)
T 2a2a_A          164 GLAHEIEDGVE--FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQ--E-TLANITSVS----  234 (321)
T ss_dssp             TTCEECCTTCC--CCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHH--H-HHHHHHTTC----
T ss_pred             ccceecCcccc--ccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCCCCHH--H-HHHHHHhcc----
Confidence            99987654332  23357899999999999889999999999999999999999999765421  1 111222111    


Q ss_pred             HHHhhhcCCCCCH----HHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 005257          593 LDARLRAKGGFDE----DEVERVLHLGLLCAYPDPRARPTMRQVVKV  635 (705)
Q Consensus       593 id~~l~~~~~~~~----~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  635 (705)
                              ..++.    .....+.+++..||+.||++|||+.|++++
T Consensus       235 --------~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~e~l~h  273 (321)
T 2a2a_A          235 --------YDFDEEFFSHTSELAKDFIRKLLVKETRKRLTIQEALRH  273 (321)
T ss_dssp             --------CCCCHHHHTTCCHHHHHHHHTTSCSSTTTSCCHHHHHHS
T ss_pred             --------cccChhhhcccCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence                    11111    123567899999999999999999999884

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=1.7e-39  Score=347.03  Aligned_cols=273  Identities=25%  Similarity=0.361  Sum_probs=203.6

Q ss_pred             CHHHHHHHhCCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCCchhHHHHHHHHHHhcc--CCCCCcceeeeeeee
Q 005257          355 TYQEIEAATKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGR--LKHKSLVGLRGWCKR  432 (705)
Q Consensus       355 ~~~el~~at~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~~~~~~~~~Ei~~l~~--l~Hpniv~l~g~~~~  432 (705)
                      +...-....++|...+.||+|+||.||+|.+.  ++.||||++...   ....+.+|.+++..  ++||||+++++++..
T Consensus        28 ~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~---~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~  102 (337)
T 3mdy_A           28 PLLVQRTIAKQIQMVKQIGKGRYGEVWMGKWR--GEKVAVKVFFTT---EEASWFRETEIYQTVLMRHENILGFIAADIK  102 (337)
T ss_dssp             CHHHHTTHHHHCEEEEEEEEETTEEEEEEEET--TEEEEEEEEEGG---GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEE
T ss_pred             CcccccccccceEEEeEeecCCCeEEEEEEEC--CceEEEEEEecc---ccchhhhHHHHHHHHhhcCCCeeeEEEEEcc
Confidence            33334445678999999999999999999986  789999998543   23344555555544  499999999999876


Q ss_pred             cc---CceEEEEeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCC-----CCCeeecCCCCCCeEEccC
Q 005257          433 EK---GSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGW-----EKKVLHRDIKSSNVLLDKE  504 (705)
Q Consensus       433 ~~---~~~~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~-----~~~iiHrDLkp~NILld~~  504 (705)
                      ..   ...++||||+++|+|.+++...    .+++.+++.++.|++.||.|||+.+     ..+|+||||||+|||++.+
T Consensus       103 ~~~~~~~~~lv~e~~~~g~L~~~l~~~----~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nill~~~  178 (337)
T 3mdy_A          103 GTGSWTQLYLITDYHENGSLYDYLKST----TLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKN  178 (337)
T ss_dssp             SCGGGCEEEEEECCCTTCBHHHHHHHC----CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEEECTT
T ss_pred             CCCCCCceEEEEeccCCCcHHHHhhcc----CCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEEECCC
Confidence            32   5789999999999999999653    5899999999999999999999810     1299999999999999999


Q ss_pred             CCeeeeeeccceecCCCCcce---eeeeeccccCCCccccccCCCCcc------ccEEEEehhHHHHhhC----------
Q 005257          505 MNGRLGDFGLARMHGHGQVAS---TTRVVGTVGYLAPEVFSSGRASTQ------TDVFGFGILILEVLSG----------  565 (705)
Q Consensus       505 ~~~kL~DFGla~~~~~~~~~~---~~~~~gt~~y~APE~~~~~~~s~k------sDVwS~Gvvl~ElltG----------  565 (705)
                      +.+||+|||+++.........   .....||+.|+|||++.+...+.+      +|||||||++|||++|          
T Consensus       179 ~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~~~  258 (337)
T 3mdy_A          179 GTCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEY  258 (337)
T ss_dssp             SCEEECCCTTCEECC---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCC
T ss_pred             CCEEEEeCCCceeeccccccccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhccCcccccccc
Confidence            999999999998765433221   123479999999999987766655      9999999999999999          


Q ss_pred             CCCCCCCCc--cHHHHHHHHHHhCchhHHHHHhhhcCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHhccc
Q 005257          566 RRPIEEGKP--NLVEMVWELMVQGKLLDALDARLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLEGKIE  641 (705)
Q Consensus       566 ~~Pf~~~~~--~~~~~v~~~~~~~~~~~~id~~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~  641 (705)
                      +.||.....  ..................+....     ....+...+.+++..||+.||++|||+.++++.|+.+.+
T Consensus       259 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~  331 (337)
T 3mdy_A          259 QLPYHDLVPSDPSYEDMREIVCIKKLRPSFPNRW-----SSDECLRQMGKLMTECWAHNPASRLTALRVKKTLAKMSE  331 (337)
T ss_dssp             CCTTTTTSCSSCCHHHHHHHHTTSCCCCCCCGGG-----GGSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             cccHhhhcCCCCchhhhHHHHhhhccCccccccc-----hhhHHHHHHHHHHHHhhhhChhhCCCHHHHHHHHHHHHh
Confidence            666654221  11111111111111100000000     012667889999999999999999999999999998766

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}

Probab=100.00  E-value=5.6e-40  Score=367.61  Aligned_cols=247  Identities=27%  Similarity=0.425  Sum_probs=206.8

Q ss_pred             CCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCC---chhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEEE
Q 005257          364 KGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHEN---DGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLV  440 (705)
Q Consensus       364 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~---~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~lV  440 (705)
                      ++|...+.||+|+||.||+|.+..+|+.||||++....   ....+.+.+|+.+++.++||||+++++++.. ...+++|
T Consensus        16 ~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~-~~~~~lv   94 (476)
T 2y94_A           16 GHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVIST-PSDIFMV   94 (476)
T ss_dssp             TTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEEC-SSEEEEE
T ss_pred             cCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEE-CCEEEEE
Confidence            56888999999999999999999899999999986542   2235678999999999999999999999876 6789999


Q ss_pred             EeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecCC
Q 005257          441 YDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGH  520 (705)
Q Consensus       441 ~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~~  520 (705)
                      |||+++|+|.+++.+.   ..+++.+++.++.||+.||.|||+   .+|+||||||+|||++.++++||+|||+++....
T Consensus        95 ~E~~~gg~L~~~l~~~---~~l~~~~~~~i~~qi~~aL~~LH~---~givHrDLkp~NIll~~~~~vkL~DFG~a~~~~~  168 (476)
T 2y94_A           95 MEYVSGGELFDYICKN---GRLDEKESRRLFQQILSGVDYCHR---HMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSD  168 (476)
T ss_dssp             EECCSSEEHHHHTTSS---SSCCHHHHHHHHHHHHHHHHHHHT---TTEECSCCSGGGEEECTTCCEEECCCSSCEECCT
T ss_pred             EeCCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHH---CCCCcccccHHHEEEecCCCeEEEeccchhhccc
Confidence            9999999999999643   269999999999999999999998   9999999999999999999999999999987755


Q ss_pred             CCcceeeeeeccccCCCccccccCCC-CccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhHHHHHhhhc
Q 005257          521 GQVASTTRVVGTVGYLAPEVFSSGRA-STQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRA  599 (705)
Q Consensus       521 ~~~~~~~~~~gt~~y~APE~~~~~~~-s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~l~~  599 (705)
                      ...  ....+||+.|+|||++.+..+ +.++|||||||++|||++|+.||......   .....+..+.           
T Consensus       169 ~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~---~~~~~i~~~~-----------  232 (476)
T 2y94_A          169 GEF--LRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVP---TLFKKICDGI-----------  232 (476)
T ss_dssp             TCC--BCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSSSH---HHHHHHHTTC-----------
T ss_pred             ccc--ccccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCCHH---HHHHHHhcCC-----------
Confidence            432  233579999999999988765 78999999999999999999999865431   1122222221           


Q ss_pred             CCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHH
Q 005257          600 KGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVK  634 (705)
Q Consensus       600 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~  634 (705)
                       ...+......+.+++..||+.||++|||+.|+++
T Consensus       233 -~~~p~~~s~~~~~Li~~~L~~dP~~Rpt~~eil~  266 (476)
T 2y94_A          233 -FYTPQYLNPSVISLLKHMLQVDPMKRATIKDIRE  266 (476)
T ss_dssp             -CCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             -cCCCccCCHHHHHHHHHHcCCCchhCcCHHHHHh
Confidence             1112223356788999999999999999999997

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}

Probab=100.00  E-value=9.3e-40  Score=345.49  Aligned_cols=263  Identities=24%  Similarity=0.280  Sum_probs=200.7

Q ss_pred             CCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCCc--hhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEEEE
Q 005257          364 KGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHEND--GGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVY  441 (705)
Q Consensus       364 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~--~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~lV~  441 (705)
                      ++|...+.||+|+||+||+|.+..+++.||||++.....  ...+.+.+|++++++++||||+++++++.. .+..++||
T Consensus         3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~lv~   81 (311)
T 4agu_A            3 EKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRR-KRRLHLVF   81 (311)
T ss_dssp             CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEE-TTEEEEEE
T ss_pred             ccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeec-CCeEEEEE
Confidence            578889999999999999999999999999999865533  235678899999999999999999999876 67899999


Q ss_pred             eeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecCCC
Q 005257          442 DYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHG  521 (705)
Q Consensus       442 E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~~~  521 (705)
                      ||+++++|.+++....   .+++..+..++.|++.||.|||+   .+|+||||||+||+++.++.+||+|||+++.....
T Consensus        82 e~~~~~~l~~~~~~~~---~~~~~~~~~i~~~l~~~l~~lH~---~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~  155 (311)
T 4agu_A           82 EYCDHTVLHELDRYQR---GVPEHLVKSITWQTLQAVNFCHK---HNCIHRDVKPENILITKHSVIKLCDFGFARLLTGP  155 (311)
T ss_dssp             ECCSEEHHHHHHHTSS---CCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCCTTCEECC--
T ss_pred             EeCCCchHHHHHhhhc---CCCHHHHHHHHHHHHHHHHHHHH---CCCcCCCCChhhEEEcCCCCEEEeeCCCchhccCc
Confidence            9999999999886433   58999999999999999999998   99999999999999999999999999999876533


Q ss_pred             CcceeeeeeccccCCCcccccc-CCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhHHHHHhhh--
Q 005257          522 QVASTTRVVGTVGYLAPEVFSS-GRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDARLR--  598 (705)
Q Consensus       522 ~~~~~~~~~gt~~y~APE~~~~-~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~l~--  598 (705)
                      .. ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||............... .+...........  
T Consensus       156 ~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~  233 (311)
T 4agu_A          156 SD-YYDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKT-LGDLIPRHQQVFSTN  233 (311)
T ss_dssp             -----------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHH-HCSCCHHHHHHHHTC
T ss_pred             cc-ccCCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHH-hcccccccccccccc
Confidence            22 2234578999999999876 56899999999999999999999999875432111111111 1111110000000  


Q ss_pred             ---------cCCCC-C-----HHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 005257          599 ---------AKGGF-D-----EDEVERVLHLGLLCAYPDPRARPTMRQVVKV  635 (705)
Q Consensus       599 ---------~~~~~-~-----~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  635 (705)
                               ..... .     ......+.+++..||+.||++|||++|++++
T Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h  285 (311)
T 4agu_A          234 QYFSGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLHH  285 (311)
T ss_dssp             GGGTTCCCCCCSSCCCHHHHCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHTS
T ss_pred             cccccCcCCCccccchhhhhcccccHHHHHHHHHHccCChhhcCCHHHHhcC
Confidence                     00000 0     1223457899999999999999999999874

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*

Probab=100.00  E-value=5.7e-40  Score=348.05  Aligned_cols=282  Identities=25%  Similarity=0.350  Sum_probs=212.8

Q ss_pred             hCCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCC--chhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEEE
Q 005257          363 TKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHEN--DGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLV  440 (705)
Q Consensus       363 t~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~--~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~lV  440 (705)
                      .++|+..+.||+|+||+||+|.+.. ++.||+|++....  ....+.+.+|++++++++||||+++++++.. +..+++|
T Consensus        20 ~~~y~~~~~lG~G~~g~V~~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~~lv   97 (311)
T 3niz_A           20 MEKYQKLEKVGEGTYGVVYKAKDSQ-GRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHS-ERCLTLV   97 (311)
T ss_dssp             SCEEEEEEEEEECSSCEEEEEEETT-SCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECC-SSCEEEE
T ss_pred             HhhhHhhhhccCCCCeEEEEEEECC-CCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEcc-CCEEEEE
Confidence            4678899999999999999999864 8899999987543  2335678999999999999999999999876 6789999


Q ss_pred             EeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecCC
Q 005257          441 YDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGH  520 (705)
Q Consensus       441 ~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~~  520 (705)
                      |||+++ +|.+++.....  .+++.++..++.|++.||.|||+   .+|+||||||+|||++.++.+||+|||+++....
T Consensus        98 ~e~~~~-~l~~~~~~~~~--~~~~~~~~~~~~qi~~~l~~LH~---~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~  171 (311)
T 3niz_A           98 FEFMEK-DLKKVLDENKT--GLQDSQIKIYLYQLLRGVAHCHQ---HRILHRDLKPQNLLINSDGALKLADFGLARAFGI  171 (311)
T ss_dssp             EECCSE-EHHHHHHTCTT--CCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECCCTTCEETTS
T ss_pred             EcCCCC-CHHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCchHhEEECCCCCEEEccCcCceecCC
Confidence            999985 88888865432  58999999999999999999998   9999999999999999999999999999987654


Q ss_pred             CCcceeeeeeccccCCCcccccc-CCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhHHHHHhhhc
Q 005257          521 GQVASTTRVVGTVGYLAPEVFSS-GRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRA  599 (705)
Q Consensus       521 ~~~~~~~~~~gt~~y~APE~~~~-~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~l~~  599 (705)
                      ... ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||.......                       
T Consensus       172 ~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~-----------------------  227 (311)
T 3niz_A          172 PVR-SYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDD-----------------------  227 (311)
T ss_dssp             CCC----CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTTT-----------------------
T ss_pred             Ccc-cccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChHH-----------------------
Confidence            322 2233578999999999876 568999999999999999999999997643210                       


Q ss_pred             CCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHhccccCCCCC----cchhhHHHHHHhhccccccccccccccC
Q 005257          600 KGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLEGKIEAGIENE----TEDMDAYLLQQVKSKDMWANYSRSFGYG  675 (705)
Q Consensus       600 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~r~~~~~  675 (705)
                                .+..+...+..+.|...|...++....+...+......    .......+.+++..+..++|..|.++.+
T Consensus       228 ----------~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e  297 (311)
T 3niz_A          228 ----------QLPKIFSILGTPNPREWPQVQELPLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARD  297 (311)
T ss_dssp             ----------HHHHHHHHHCCCCTTTSGGGTTSHHHHSCCCCCCCCCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCCHHH
T ss_pred             ----------HHHHHHHHHCCCChHHhhhhhccchhhhcccccccCCcHHHhCcccCHHHHHHHHHHcCCChhHCCCHHH
Confidence                      01112222223334333333332222221111000000    0112345667888888899999999999


Q ss_pred             CCCCCCccccc
Q 005257          676 YATHPTFHDIR  686 (705)
Q Consensus       676 ~~~hp~f~~~~  686 (705)
                      ++.||||.++.
T Consensus       298 ll~hp~f~~~~  308 (311)
T 3niz_A          298 AMNHPYFKDLD  308 (311)
T ss_dssp             HHTSGGGTTSC
T ss_pred             HhcCcccccCC
Confidence            99999998765

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}

Probab=100.00  E-value=3.9e-40  Score=349.32  Aligned_cols=265  Identities=23%  Similarity=0.256  Sum_probs=209.1

Q ss_pred             HhCCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCCchhHHHHHHHHHHhccCCCCCcceeeeeeeec---cCceE
Q 005257          362 ATKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKRE---KGSLM  438 (705)
Q Consensus       362 at~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~---~~~~~  438 (705)
                      ..++|...+.||+|+||.||++....+++.||||++........+.+.+|+++++.++||||+++++++...   ....+
T Consensus        27 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~  106 (317)
T 2buj_A           27 DNKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAW  106 (317)
T ss_dssp             TTEEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEEEE
T ss_pred             CCeEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecCCHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCceeE
Confidence            346789999999999999999999889999999999776666778899999999999999999999998732   34789


Q ss_pred             EEEeeCCCCChhHHHHhc-CCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeecccee
Q 005257          439 LVYDYMENGSLDKWIFQC-DGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARM  517 (705)
Q Consensus       439 lV~E~~~~gsL~~~L~~~-~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~  517 (705)
                      +||||+++|+|.+++... .....+++.+++.++.|++.||.|||+   .+|+||||||+|||++.++.+||+|||+++.
T Consensus       107 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~---~~ivH~dlkp~NIl~~~~~~~kl~dfg~~~~  183 (317)
T 2buj_A          107 LLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHA---KGYAHRDLKPTNILLGDEGQPVLMDLGSMNQ  183 (317)
T ss_dssp             EEEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTSCEEECCCSSCEE
T ss_pred             EEEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCHHHEEEcCCCCEEEEecCcchh
Confidence            999999999999999763 223369999999999999999999999   8999999999999999999999999999876


Q ss_pred             cCCCCcc--------eeeeeeccccCCCccccccCC---CCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHh
Q 005257          518 HGHGQVA--------STTRVVGTVGYLAPEVFSSGR---ASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQ  586 (705)
Q Consensus       518 ~~~~~~~--------~~~~~~gt~~y~APE~~~~~~---~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~  586 (705)
                      .......        ......||+.|+|||++....   ++.++|||||||++|||++|+.||.....          ..
T Consensus       184 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~----------~~  253 (317)
T 2buj_A          184 ACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQ----------KG  253 (317)
T ss_dssp             SCEEEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHH----------TT
T ss_pred             cccccccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhc----------cc
Confidence            5321110        011235799999999987654   68999999999999999999999853100          00


Q ss_pred             CchhHHHHHhhhcCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHhccc
Q 005257          587 GKLLDALDARLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLEGKIE  641 (705)
Q Consensus       587 ~~~~~~id~~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~  641 (705)
                      ......+.....  ..........+.+++..||+.||.+||++.++++.|+...+
T Consensus       254 ~~~~~~~~~~~~--~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~~~~  306 (317)
T 2buj_A          254 DSVALAVQNQLS--IPQSPRHSSALWQLLNSMMTVDPHQRPHIPLLLSQLEALQP  306 (317)
T ss_dssp             SCHHHHHHCC----CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTCC
T ss_pred             chhhHHhhccCC--CCccccCCHHHHHHHHHHhhcChhhCCCHHHHHHHhhhcCC
Confidence            001111111111  11122334578899999999999999999999999997755

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A

Probab=100.00  E-value=2.4e-40  Score=350.81  Aligned_cols=253  Identities=23%  Similarity=0.320  Sum_probs=200.5

Q ss_pred             CCCCc-ceEEeecCceEEEEEEEcCCCeEEEEEEeccCCchhHHHHHHHHHHhccC-CCCCcceeeeeeeeccCceEEEE
Q 005257          364 KGFSE-ENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRL-KHKSLVGLRGWCKREKGSLMLVY  441 (705)
Q Consensus       364 ~~f~~-~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~~~~~~~~~Ei~~l~~l-~Hpniv~l~g~~~~~~~~~~lV~  441 (705)
                      +.|.. .+.||+|+||.||+|.+..+++.||||++........+.+.+|++++.++ +||||+++++++.. ++.+++||
T Consensus        12 ~~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~-~~~~~lv~   90 (316)
T 2ac3_A           12 DVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEE-EDRFYLVF   90 (316)
T ss_dssp             TSCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCSSCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEE-TTEEEEEE
T ss_pred             eeEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCcchhHHHHHHHHHHHHHhcCCCCeeeEEEEEee-CCEEEEEE
Confidence            45666 37899999999999999988999999999876666678899999999885 79999999999876 67899999


Q ss_pred             eeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCC---eeeeeeccceec
Q 005257          442 DYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMN---GRLGDFGLARMH  518 (705)
Q Consensus       442 E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~---~kL~DFGla~~~  518 (705)
                      ||+++|+|.+++....   .+++.++..++.|++.||.|||+   .+|+||||||+|||++.++.   +||+|||+++..
T Consensus        91 e~~~~~~L~~~l~~~~---~~~~~~~~~i~~qi~~~l~~lH~---~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~~  164 (316)
T 2ac3_A           91 EKMRGGSILSHIHKRR---HFNELEASVVVQDVASALDFLHN---KGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGI  164 (316)
T ss_dssp             ECCTTCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEESCSSSSCSEEECCTTCCC--
T ss_pred             EcCCCCcHHHHHhccC---CCCHHHHHHHHHHHHHHHHHHHh---CCceeCCCCHHHEEEccCCCcCceEEEEccCcccc
Confidence            9999999999997653   68999999999999999999999   99999999999999998776   999999999765


Q ss_pred             CCCCc------ceeeeeeccccCCCcccccc-----CCCCccccEEEEehhHHHHhhCCCCCCCCCccH-----------
Q 005257          519 GHGQV------ASTTRVVGTVGYLAPEVFSS-----GRASTQTDVFGFGILILEVLSGRRPIEEGKPNL-----------  576 (705)
Q Consensus       519 ~~~~~------~~~~~~~gt~~y~APE~~~~-----~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~-----------  576 (705)
                      .....      .......||+.|+|||++..     ..++.++|||||||++|||++|+.||.......           
T Consensus       165 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~  244 (316)
T 2ac3_A          165 KLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPA  244 (316)
T ss_dssp             -----------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCSCC----CCHH
T ss_pred             ccCCccccccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCcccccccccccccccchh
Confidence            42211      11223569999999999865     457899999999999999999999997643211           


Q ss_pred             -HHHHHHHHHhCchhHHHHHhhhcCCCCCHH----HHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 005257          577 -VEMVWELMVQGKLLDALDARLRAKGGFDED----EVERVLHLGLLCAYPDPRARPTMRQVVKV  635 (705)
Q Consensus       577 -~~~v~~~~~~~~~~~~id~~l~~~~~~~~~----~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  635 (705)
                       ...+.+.+..+.            ..++..    ....+.+++..||+.||++|||+.|++++
T Consensus       245 ~~~~~~~~i~~~~------------~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~h  296 (316)
T 2ac3_A          245 CQNMLFESIQEGK------------YEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQH  296 (316)
T ss_dssp             HHHHHHHHHHHCC------------CCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred             HHHHHHHHHhccC------------cccCchhcccCCHHHHHHHHHHhhCChhhCCCHHHHhcC
Confidence             111112222221            112221    23568899999999999999999999884

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*

Probab=100.00  E-value=2.9e-40  Score=349.89  Aligned_cols=270  Identities=23%  Similarity=0.415  Sum_probs=206.0

Q ss_pred             HHHHHHhCCCCcceEEeecCceEEEEEEEcC---CCeEEEEEEeccCC--chhHHHHHHHHHHhccCCCCCcceeeeeee
Q 005257          357 QEIEAATKGFSEENVIGVGGNGKVYKGVLEG---GGAEIAVKRISHEN--DGGTRAFLAEISSLGRLKHKSLVGLRGWCK  431 (705)
Q Consensus       357 ~el~~at~~f~~~~~LG~G~fg~Vy~~~~~~---~~~~vavK~i~~~~--~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~  431 (705)
                      +++....++|...+.||+|+||.||+|.+..   ++..||||+++...  ....+.+.+|+.++++++||||+++++++.
T Consensus        27 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~  106 (313)
T 3brb_A           27 EDVVIDRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCI  106 (313)
T ss_dssp             TTTBCCGGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEE
T ss_pred             HhcccCHHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEEe
Confidence            3444556788999999999999999998864   45689999987553  344577999999999999999999999987


Q ss_pred             eccC----ceEEEEeeCCCCChhHHHHhc---CCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccC
Q 005257          432 REKG----SLMLVYDYMENGSLDKWIFQC---DGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKE  504 (705)
Q Consensus       432 ~~~~----~~~lV~E~~~~gsL~~~L~~~---~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~  504 (705)
                      ....    ..++||||+++|+|.+++...   .....+++.+++.++.|++.||.|||+   .+|+||||||+|||++.+
T Consensus       107 ~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~dikp~NIli~~~  183 (313)
T 3brb_A          107 EMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSN---RNFLHRDLAARNCMLRDD  183 (313)
T ss_dssp             C-------CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHT---TTCCCCCCSGGGEEECTT
T ss_pred             eccccCCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCcceEEEcCC
Confidence            5332    459999999999999999643   223469999999999999999999998   999999999999999999


Q ss_pred             CCeeeeeeccceecCCCCc-ceeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhh-CCCCCCCCCccHHHHHHH
Q 005257          505 MNGRLGDFGLARMHGHGQV-ASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLS-GRRPIEEGKPNLVEMVWE  582 (705)
Q Consensus       505 ~~~kL~DFGla~~~~~~~~-~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~Ellt-G~~Pf~~~~~~~~~~v~~  582 (705)
                      +.+||+|||+++....... .......+++.|+|||.+.+..++.++|||||||++|||++ |+.||.......   ...
T Consensus       184 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~---~~~  260 (313)
T 3brb_A          184 MTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHE---MYD  260 (313)
T ss_dssp             SCEEECSCSCC----------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGG---HHH
T ss_pred             CcEEEeecCcceecccccccCcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccCCHHH---HHH
Confidence            9999999999986644322 12233467889999999999899999999999999999999 888987654321   111


Q ss_pred             HHHhCchhHHHHHhhhcCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHhccccC
Q 005257          583 LMVQGKLLDALDARLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLEGKIEAG  643 (705)
Q Consensus       583 ~~~~~~~~~~id~~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~~~  643 (705)
                      .+..+..           ...+......+.+++..||+.||.+||++.++++.|+...+..
T Consensus       261 ~~~~~~~-----------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~l~~~l  310 (313)
T 3brb_A          261 YLLHGHR-----------LKQPEDCLDELYEIMYSCWRTDPLDRPTFSVLRLQLEKLLESL  310 (313)
T ss_dssp             HHHTTCC-----------CCCBTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHHC
T ss_pred             HHHcCCC-----------CCCCccccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhc
Confidence            1111110           1222334467889999999999999999999999999877643

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=8.1e-40  Score=342.25  Aligned_cols=257  Identities=25%  Similarity=0.384  Sum_probs=209.5

Q ss_pred             CCCCcce-EEeecCceEEEEEEEc--CCCeEEEEEEeccCC-chhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEE
Q 005257          364 KGFSEEN-VIGVGGNGKVYKGVLE--GGGAEIAVKRISHEN-DGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLML  439 (705)
Q Consensus       364 ~~f~~~~-~LG~G~fg~Vy~~~~~--~~~~~vavK~i~~~~-~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~l  439 (705)
                      ++|...+ .||+|+||.||+|.+.  .++..||||+++... ....+.+.+|++++++++||||+++++++.  .+..++
T Consensus         9 ~~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~--~~~~~l   86 (287)
T 1u59_A            9 DNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQ--AEALML   86 (287)
T ss_dssp             GGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEE--SSSEEE
T ss_pred             HHhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhCCCCCEeEEEEEec--CCCcEE
Confidence            3455555 8999999999999864  457889999997653 345678999999999999999999999984  457899


Q ss_pred             EEeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecC
Q 005257          440 VYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHG  519 (705)
Q Consensus       440 V~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~  519 (705)
                      ||||+++++|.+++....  ..+++.+++.++.|++.||.|||+   .+|+||||||+||+++.++.+||+|||+++...
T Consensus        87 v~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~  161 (287)
T 1u59_A           87 VMEMAGGGPLHKFLVGKR--EEIPVSNVAELLHQVSMGMKYLEE---KNFVHRDLAARNVLLVNRHYAKISDFGLSKALG  161 (287)
T ss_dssp             EEECCTTEEHHHHHTTCT--TTSCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEEEETTEEEECCCTTCEECT
T ss_pred             EEEeCCCCCHHHHHHhCC--ccCCHHHHHHHHHHHHHHHHHHHH---CCEeeCCCchheEEEcCCCCEEECcccceeeec
Confidence            999999999999996533  369999999999999999999998   999999999999999999999999999998775


Q ss_pred             CCCcce--eeeeeccccCCCccccccCCCCccccEEEEehhHHHHhh-CCCCCCCCCccHHHHHHHHHHhCchhHHHHHh
Q 005257          520 HGQVAS--TTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLS-GRRPIEEGKPNLVEMVWELMVQGKLLDALDAR  596 (705)
Q Consensus       520 ~~~~~~--~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~Ellt-G~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~  596 (705)
                      ......  .....||+.|+|||++.+..++.++|||||||++|||++ |+.||......   .....+..+..       
T Consensus       162 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~---~~~~~i~~~~~-------  231 (287)
T 1u59_A          162 ADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGP---EVMAFIEQGKR-------  231 (287)
T ss_dssp             TCSCEECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTH---HHHHHHHTTCC-------
T ss_pred             cCcceeeccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHH---HHHHHHhcCCc-------
Confidence            443222  122356889999999988889999999999999999998 99999765432   11122222211       


Q ss_pred             hhcCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHhccc
Q 005257          597 LRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLEGKIE  641 (705)
Q Consensus       597 l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~  641 (705)
                          ...+......+.+++..||+.||++||++.++++.|+....
T Consensus       232 ----~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~  272 (287)
T 1u59_A          232 ----MECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYY  272 (287)
T ss_dssp             ----CCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             ----CCCCCCcCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence                22333445678999999999999999999999999987654

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}

Probab=100.00  E-value=1e-39  Score=377.32  Aligned_cols=255  Identities=25%  Similarity=0.386  Sum_probs=205.0

Q ss_pred             CCcce-EEeecCceEEEEEEEc--CCCeEEEEEEeccCC-chhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEEEE
Q 005257          366 FSEEN-VIGVGGNGKVYKGVLE--GGGAEIAVKRISHEN-DGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVY  441 (705)
Q Consensus       366 f~~~~-~LG~G~fg~Vy~~~~~--~~~~~vavK~i~~~~-~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~lV~  441 (705)
                      +...+ .||+|+||.||+|.+.  .++..||||+++... ....+++.+|+++|++++||||++++++|..  +.+++||
T Consensus       337 ~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~--~~~~lv~  414 (613)
T 2ozo_A          337 LLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA--EALMLVM  414 (613)
T ss_dssp             EEEEEEEEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEES--SSEEEEE
T ss_pred             eeEcCcEEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEecc--CCeEEEE
Confidence            33344 7999999999999875  346789999997653 3456889999999999999999999999864  4689999


Q ss_pred             eeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecCCC
Q 005257          442 DYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHG  521 (705)
Q Consensus       442 E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~~~  521 (705)
                      ||+++|+|.+++....  ..+++.+++.++.||+.||.|||+   ++|+||||||+|||++.++.+||+|||+++.....
T Consensus       415 E~~~~g~L~~~l~~~~--~~l~~~~~~~i~~qi~~~L~~LH~---~~iiHrDlkp~NILl~~~~~vkL~DFGla~~~~~~  489 (613)
T 2ozo_A          415 EMAGGGPLHKFLVGKR--EEIPVSNVAELLHQVSMGMKYLEE---KNFVHRNLAARNVLLVNRHYAKISDFGLSKALGAD  489 (613)
T ss_dssp             ECCTTCBHHHHHTTCT--TTSCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEEEETTEEEECCCSTTTTCC--
T ss_pred             EeCCCCcHHHHHhhcc--CCCCHHHHHHHHHHHHHHHHHHHH---CCEEcCcCCHHHEEEcCCCcEEEeeccCcccccCC
Confidence            9999999999996543  369999999999999999999999   99999999999999999999999999999876543


Q ss_pred             Cccee--eeeeccccCCCccccccCCCCccccEEEEehhHHHHhh-CCCCCCCCCccHHHHHHHHHHhCchhHHHHHhhh
Q 005257          522 QVAST--TRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLS-GRRPIEEGKPNLVEMVWELMVQGKLLDALDARLR  598 (705)
Q Consensus       522 ~~~~~--~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~Ellt-G~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~l~  598 (705)
                      .....  ....+|+.|+|||++.+..++.++|||||||++|||++ |+.||......   .+...+..+..         
T Consensus       490 ~~~~~~~~~~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~---~~~~~i~~~~~---------  557 (613)
T 2ozo_A          490 DSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGP---EVMAFIEQGKR---------  557 (613)
T ss_dssp             ------------CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCSH---HHHHHHHTTCC---------
T ss_pred             CceeeeccCCCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCHH---HHHHHHHcCCC---------
Confidence            32221  22345689999999998999999999999999999998 99999875432   12222322221         


Q ss_pred             cCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHhccc
Q 005257          599 AKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLEGKIE  641 (705)
Q Consensus       599 ~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~  641 (705)
                        ...+..+...+.+++..||+.||++||++.++++.|+....
T Consensus       558 --~~~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~~  598 (613)
T 2ozo_A          558 --MECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYY  598 (613)
T ss_dssp             --CCCCTTCCHHHHHHHHHTTCSSTTTSCCHHHHHHHHHHHHH
T ss_pred             --CCCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHH
Confidence              22334455778999999999999999999999999987644

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A

Probab=100.00  E-value=1.6e-40  Score=357.29  Aligned_cols=253  Identities=26%  Similarity=0.369  Sum_probs=204.4

Q ss_pred             hCCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCCchhHHHHHHHHHHhccC-CCCCcceeeeeeeeccCceEEEE
Q 005257          363 TKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRL-KHKSLVGLRGWCKREKGSLMLVY  441 (705)
Q Consensus       363 t~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~~~~~~~~~Ei~~l~~l-~Hpniv~l~g~~~~~~~~~~lV~  441 (705)
                      .++|...+.||+|+||.||+|.++.+++.||||++.....    ...+|++++.++ +||||+++++++.. ...+++||
T Consensus        21 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~----~~~~E~~~l~~~~~hp~iv~~~~~~~~-~~~~~lv~   95 (342)
T 2qr7_A           21 TDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKR----DPTEEIEILLRYGQHPNIITLKDVYDD-GKYVYVVT   95 (342)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTC----CCHHHHHHHHHHTTSTTBCCEEEEEEC-SSEEEEEE
T ss_pred             cccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccC----ChHHHHHHHHHhcCCCCcCeEEEEEEc-CCEEEEEE
Confidence            4568889999999999999999999999999999976533    234688888888 79999999998876 67899999


Q ss_pred             eeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccC----CCeeeeeecccee
Q 005257          442 DYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKE----MNGRLGDFGLARM  517 (705)
Q Consensus       442 E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~----~~~kL~DFGla~~  517 (705)
                      ||+++|+|.+++....   .+++.++..++.||+.||.|||+   .+|+||||||+|||+.++    +.+||+|||+++.
T Consensus        96 E~~~gg~L~~~i~~~~---~~~~~~~~~~~~qi~~al~~lH~---~givHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~~  169 (342)
T 2qr7_A           96 ELMKGGELLDKILRQK---FFSEREASAVLFTITKTVEYLHA---QGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQ  169 (342)
T ss_dssp             CCCCSCBHHHHHHTCT---TCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEESSSSCSGGGEEECCCTTCEE
T ss_pred             eCCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHH---CCcEeccCCHHHEEEecCCCCcCeEEEEECCCccc
Confidence            9999999999997543   69999999999999999999999   999999999999998543    3499999999987


Q ss_pred             cCCCCcceeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhHHHHHhh
Q 005257          518 HGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDARL  597 (705)
Q Consensus       518 ~~~~~~~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~l  597 (705)
                      ...... .....+||+.|+|||++.+..++.++|||||||++|||++|+.||..........+...+..+...       
T Consensus       170 ~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~i~~~~~~-------  241 (342)
T 2qr7_A          170 LRAENG-LLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEILARIGSGKFS-------  241 (342)
T ss_dssp             CBCTTC-CBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSSTTSCHHHHHHHHHHCCCC-------
T ss_pred             CcCCCC-ceeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCCcCCHHHHHHHHccCCcc-------
Confidence            654432 223357899999999998878899999999999999999999999864332233333333333221       


Q ss_pred             hcCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 005257          598 RAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKV  635 (705)
Q Consensus       598 ~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  635 (705)
                       ....+.......+.+++..||+.||++||++.+++++
T Consensus       242 -~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~~il~h  278 (342)
T 2qr7_A          242 -LSGGYWNSVSDTAKDLVSKMLHVDPHQRLTAALVLRH  278 (342)
T ss_dssp             -CCSTTTTTSCHHHHHHHHHHTCSSTTTSCCHHHHTTS
T ss_pred             -cCccccccCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence             0011112334668899999999999999999999874

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7

Probab=100.00  E-value=1.2e-40  Score=379.33  Aligned_cols=261  Identities=26%  Similarity=0.431  Sum_probs=212.9

Q ss_pred             HHHHhCCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCCchhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceE
Q 005257          359 IEAATKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLM  438 (705)
Q Consensus       359 l~~at~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~  438 (705)
                      ++...++|...+.||+|+||.||+|.+.. +..||||+++... ...++|.+|+++|++++||||++++++|..  +.++
T Consensus       262 ~~i~~~~~~~~~~lG~G~fg~Vy~~~~~~-~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~--~~~~  337 (535)
T 2h8h_A          262 WEIPRESLRLEVKLGQGCFGEVWMGTWNG-TTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE--EPIY  337 (535)
T ss_dssp             SBCCGGGEEEEEEEEECSSEEEEEEEETT-TEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS--SSCE
T ss_pred             eecchhhhhhheecccCCCeEEEEEEECC-CceEEEEEeCCCC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEee--ccce
Confidence            34455678889999999999999999975 5679999997543 345789999999999999999999998864  5789


Q ss_pred             EEEeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceec
Q 005257          439 LVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMH  518 (705)
Q Consensus       439 lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~  518 (705)
                      |||||+++|+|.++|..... ..+++.+++.++.||+.||.|||+   ++|+||||||+|||++.++.+||+|||+++..
T Consensus       338 lv~e~~~~gsL~~~l~~~~~-~~l~~~~~~~i~~qi~~~L~~LH~---~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~  413 (535)
T 2h8h_A          338 IVTEYMSKGSLLDFLKGETG-KYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARLI  413 (535)
T ss_dssp             EEECCCTTEEHHHHHSHHHH-TTCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECGGGCEEECCTTSTTTC
T ss_pred             EeeehhcCCcHHHHHhhcCC-CCCCHHHHHHHHHHHHHHHHHHHh---CCeeCCCCCHhhEEEcCCCcEEEcccccceec
Confidence            99999999999999965322 258999999999999999999998   99999999999999999999999999999866


Q ss_pred             CCCCcceeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhh-CCCCCCCCCccHHHHHHHHHHhCchhHHHHHhh
Q 005257          519 GHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLS-GRRPIEEGKPNLVEMVWELMVQGKLLDALDARL  597 (705)
Q Consensus       519 ~~~~~~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~Ellt-G~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~l  597 (705)
                      ............++..|+|||++....++.++|||||||++|||++ |+.||.....   ..+...+..+.         
T Consensus       414 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~~---~~~~~~i~~~~---------  481 (535)
T 2h8h_A          414 EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN---REVLDQVERGY---------  481 (535)
T ss_dssp             CCHHHHTTCSTTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTCCH---HHHHHHHHTTC---------
T ss_pred             CCCceecccCCcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCH---HHHHHHHHcCC---------
Confidence            4322222222356788999999998899999999999999999999 9999976542   11222222221         


Q ss_pred             hcCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHhccc
Q 005257          598 RAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLEGKIE  641 (705)
Q Consensus       598 ~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~  641 (705)
                      +  ...+..+...+.+++..||+.||++|||+.++++.|+....
T Consensus       482 ~--~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~~  523 (535)
T 2h8h_A          482 R--MPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFT  523 (535)
T ss_dssp             C--CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSC
T ss_pred             C--CCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHhh
Confidence            1  12233445678899999999999999999999999997765

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*

Probab=100.00  E-value=9.6e-40  Score=352.05  Aligned_cols=249  Identities=26%  Similarity=0.360  Sum_probs=203.5

Q ss_pred             CCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCCc---hhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEEE
Q 005257          364 KGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHEND---GGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLV  440 (705)
Q Consensus       364 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~---~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~lV  440 (705)
                      +.|...+.||+|+||+||+|....+++.||||++.....   ...+.+.+|++++++++||||+++++++.. ++..++|
T Consensus        54 ~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~~~lv  132 (348)
T 1u5q_A           54 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLR-EHTAWLV  132 (348)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEE-TTEEEEE
T ss_pred             hheeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEE-CCeEEEE
Confidence            347888999999999999999988999999999975432   234678999999999999999999998876 6789999


Q ss_pred             EeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecCC
Q 005257          441 YDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGH  520 (705)
Q Consensus       441 ~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~~  520 (705)
                      |||++ |+|.+++.....  .+++.++..++.|++.||.|||+   .+|+||||||+|||++.++.+||+|||+++....
T Consensus       133 ~e~~~-g~l~~~l~~~~~--~l~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~  206 (348)
T 1u5q_A          133 MEYCL-GSASDLLEVHKK--PLQEVEIAAVTHGALQGLAYLHS---HNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAP  206 (348)
T ss_dssp             EECCS-EEHHHHHHHHTS--CCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCSGGGEEEETTTEEEECCCTTCBSSSS
T ss_pred             EecCC-CCHHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHh---CCeeeCCCCHHHEEECCCCCEEEeeccCceecCC
Confidence            99997 688888865432  68999999999999999999999   8999999999999999999999999999986543


Q ss_pred             CCcceeeeeeccccCCCccccc---cCCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhHHHHHhh
Q 005257          521 GQVASTTRVVGTVGYLAPEVFS---SGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDARL  597 (705)
Q Consensus       521 ~~~~~~~~~~gt~~y~APE~~~---~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~l  597 (705)
                      .     ....||+.|+|||++.   ...++.++|||||||++|||++|+.||.....  .+.......... .       
T Consensus       207 ~-----~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~--~~~~~~~~~~~~-~-------  271 (348)
T 1u5q_A          207 A-----NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNA--MSALYHIAQNES-P-------  271 (348)
T ss_dssp             B-----CCCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH--HHHHHHHHHSCC-C-------
T ss_pred             C-----CcccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCh--HHHHHHHHhcCC-C-------
Confidence            2     2357999999999984   56789999999999999999999999976542  122222211110 0       


Q ss_pred             hcCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHH
Q 005257          598 RAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLE  637 (705)
Q Consensus       598 ~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  637 (705)
                         ..........+.+++..||+.||++|||+.+++++..
T Consensus       272 ---~~~~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~h~~  308 (348)
T 1u5q_A          272 ---ALQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRF  308 (348)
T ss_dssp             ---CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHTTCHH
T ss_pred             ---CCCCCCCCHHHHHHHHHHcccChhhCcCHHHHhhChh
Confidence               0111223456788999999999999999999988643

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}

Probab=100.00  E-value=2.5e-40  Score=362.92  Aligned_cols=273  Identities=20%  Similarity=0.267  Sum_probs=216.1

Q ss_pred             CCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCC-chhHHHHHHHHHHhccCCCCCcceeeeeeeecc-CceEEEE
Q 005257          364 KGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHEN-DGGTRAFLAEISSLGRLKHKSLVGLRGWCKREK-GSLMLVY  441 (705)
Q Consensus       364 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~-~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~-~~~~lV~  441 (705)
                      ++|...++||+|+||+||+|.+..+++.||||++.... ....+.+.+|++++++++||||+++++++.... ...++||
T Consensus         9 ~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~lv~   88 (396)
T 4eut_A            9 HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIM   88 (396)
T ss_dssp             EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEE
T ss_pred             CceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeEEEE
Confidence            56888999999999999999999999999999997543 234567889999999999999999999887533 3679999


Q ss_pred             eeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEE----ccCCCeeeeeecccee
Q 005257          442 DYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLL----DKEMNGRLGDFGLARM  517 (705)
Q Consensus       442 E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILl----d~~~~~kL~DFGla~~  517 (705)
                      ||+++|+|.+++........+++.+++.++.|++.||.|||+   .+|+||||||+|||+    +.++.+||+|||+++.
T Consensus        89 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~a~~  165 (396)
T 4eut_A           89 EFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRE---NGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARE  165 (396)
T ss_dssp             CCCTTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEEEECTTSCEEEEECCGGGCEE
T ss_pred             ecCCCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHH---CCEEECCcCHHHEEEeecCCCceeEEEecCCCceE
Confidence            999999999999765444359999999999999999999999   999999999999999    7778899999999987


Q ss_pred             cCCCCcceeeeeeccccCCCcccccc--------CCCCccccEEEEehhHHHHhhCCCCCCCCCc-cHHHHHHHHHHhCc
Q 005257          518 HGHGQVASTTRVVGTVGYLAPEVFSS--------GRASTQTDVFGFGILILEVLSGRRPIEEGKP-NLVEMVWELMVQGK  588 (705)
Q Consensus       518 ~~~~~~~~~~~~~gt~~y~APE~~~~--------~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~-~~~~~v~~~~~~~~  588 (705)
                      ......  .....||+.|+|||++.+        ..++.++|||||||++|||++|+.||..... .....+...+..+.
T Consensus       166 ~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~  243 (396)
T 4eut_A          166 LEDDEQ--FVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGK  243 (396)
T ss_dssp             CCCGGG--SSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTTTCHHHHHHHHHSC
T ss_pred             ccCCCc--cccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcccchHHHHHHHhcCC
Confidence            654332  233579999999999864        4678899999999999999999999964321 11112222222222


Q ss_pred             hhHHH-------------HHhhhcCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHhccc
Q 005257          589 LLDAL-------------DARLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLEGKIE  641 (705)
Q Consensus       589 ~~~~i-------------d~~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~  641 (705)
                      ....+             ...+.............+.+++..||+.||++||++.|+++.++..+.
T Consensus       244 p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~~l~~il~  309 (396)
T 4eut_A          244 PSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDILH  309 (396)
T ss_dssp             CTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHHT
T ss_pred             CcccchhheeccCCCcccCccCCcccccchHHHhhchHHHHHhhccChhhhccHHHHHHHHHHHhh
Confidence            11100             001111123456778889999999999999999999999999887654

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}

Probab=100.00  E-value=2.1e-40  Score=353.44  Aligned_cols=267  Identities=21%  Similarity=0.378  Sum_probs=212.5

Q ss_pred             CCCCcceEEeecCceEEEEEEE----cCCCeEEEEEEeccCCchhHHHHHHHHHHhccCCCCCcceeeeeeeecc-CceE
Q 005257          364 KGFSEENVIGVGGNGKVYKGVL----EGGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREK-GSLM  438 (705)
Q Consensus       364 ~~f~~~~~LG~G~fg~Vy~~~~----~~~~~~vavK~i~~~~~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~-~~~~  438 (705)
                      ++|...+.||+|+||.||+|.+    ..+++.||||++........+.+.+|++++++++||||+++++++.... ..++
T Consensus        41 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~  120 (326)
T 2w1i_A           41 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLK  120 (326)
T ss_dssp             GGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCCSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC----CCE
T ss_pred             HHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCCCceE
Confidence            4578889999999999999984    5578999999998777777788999999999999999999999886532 4689


Q ss_pred             EEEeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceec
Q 005257          439 LVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMH  518 (705)
Q Consensus       439 lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~  518 (705)
                      +||||+++++|.+++.....  .+++.+++.++.|++.||.|||+   .+|+||||||+|||++.++.+||+|||+++..
T Consensus       121 lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~dikp~NIli~~~~~~kL~Dfg~~~~~  195 (326)
T 2w1i_A          121 LIMEYLPYGSLRDYLQKHKE--RIDHIKLLQYTSQICKGMEYLGT---KRYIHRDLATRNILVENENRVKIGDFGLTKVL  195 (326)
T ss_dssp             EEECCCTTCBHHHHHHHSTT--SSCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEEEETTEEEECCCTTCEEC
T ss_pred             EEEECCCCCCHHHHHHhccc--CCCHHHHHHHHHHHHHHHHHHHh---CCEeccCCCcceEEEcCCCcEEEecCcchhhc
Confidence            99999999999999976543  58999999999999999999998   99999999999999999999999999999877


Q ss_pred             CCCCcce--eeeeeccccCCCccccccCCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCc--------
Q 005257          519 GHGQVAS--TTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGK--------  588 (705)
Q Consensus       519 ~~~~~~~--~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~--------  588 (705)
                      .......  .....++..|+|||.+.+..++.++|||||||++|||++|+.|+.....    ...+......        
T Consensus       196 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~----~~~~~~~~~~~~~~~~~~  271 (326)
T 2w1i_A          196 PQDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPA----EFMRMIGNDKQGQMIVFH  271 (326)
T ss_dssp             CSSCSEEECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGSHHH----HHHHHHCTTCCTHHHHHH
T ss_pred             cccccccccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCCCHH----HHHHhhccccchhhhHHH
Confidence            5443221  1224567889999999888899999999999999999999999764211    1111111111        


Q ss_pred             hhHHHHHhhhcCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHhccc
Q 005257          589 LLDALDARLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLEGKIE  641 (705)
Q Consensus       589 ~~~~id~~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~  641 (705)
                      +.+.+.....  ...+......+.+++..||+.||++|||+.++++.|+.+.+
T Consensus       272 ~~~~~~~~~~--~~~~~~~~~~l~~li~~cl~~dP~~Rps~~el~~~L~~l~~  322 (326)
T 2w1i_A          272 LIELLKNNGR--LPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRD  322 (326)
T ss_dssp             HHHHHHTTCC--CCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             HHHHhhcCCC--CCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence            1111111111  12233445678999999999999999999999999986643

>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}

Probab=100.00  E-value=2.6e-40  Score=355.81  Aligned_cols=265  Identities=18%  Similarity=0.189  Sum_probs=201.9

Q ss_pred             hCCCCcceEEeecCceEEEEEEEcC---CCeEEEEEEeccCCch-----------hHHHHHHHHHHhccCCCCCcceeee
Q 005257          363 TKGFSEENVIGVGGNGKVYKGVLEG---GGAEIAVKRISHENDG-----------GTRAFLAEISSLGRLKHKSLVGLRG  428 (705)
Q Consensus       363 t~~f~~~~~LG~G~fg~Vy~~~~~~---~~~~vavK~i~~~~~~-----------~~~~~~~Ei~~l~~l~Hpniv~l~g  428 (705)
                      .++|...+.||+|+||.||+|.+..   ++..+|||++......           ..+.+.+|+..+..++||||+++++
T Consensus        36 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~  115 (345)
T 2v62_A           36 GNQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYG  115 (345)
T ss_dssp             SCEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEE
T ss_pred             CceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeec
Confidence            3578899999999999999999986   6788999998765332           1234678889999999999999999


Q ss_pred             eeeec---cCceEEEEeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCC
Q 005257          429 WCKRE---KGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEM  505 (705)
Q Consensus       429 ~~~~~---~~~~~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~  505 (705)
                      ++...   ....++||||+ +++|.+++....   .+++.+++.++.||+.||.|||+   .+|+||||||+|||++.++
T Consensus       116 ~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~---~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~~~  188 (345)
T 2v62_A          116 SGLTEFKGRSYRFMVMERL-GIDLQKISGQNG---TFKKSTVLQLGIRMLDVLEYIHE---NEYVHGDIKAANLLLGYKN  188 (345)
T ss_dssp             EEEEESSSCEEEEEEEECE-EEEHHHHCBGGG---BCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEESSS
T ss_pred             ccccccCCCcEEEEEEecc-CCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHh---CCeeCCCcCHHHEEEccCC
Confidence            88763   45789999999 999999997543   69999999999999999999998   9999999999999999887


Q ss_pred             --CeeeeeeccceecCCCCcc------eeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhhCCCCCCCCCccHH
Q 005257          506 --NGRLGDFGLARMHGHGQVA------STTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLV  577 (705)
Q Consensus       506 --~~kL~DFGla~~~~~~~~~------~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~  577 (705)
                        .+||+|||+++........      ......||+.|+|||++.+..++.++|||||||++|||++|+.||........
T Consensus       189 ~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~  268 (345)
T 2v62_A          189 PDQVYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQNLKDPV  268 (345)
T ss_dssp             TTSEEECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTTGGGTTCHH
T ss_pred             CCcEEEEeCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCccccccccH
Confidence              9999999999876432211      11335789999999999998999999999999999999999999965322211


Q ss_pred             --HHHHHHHHhCchhHHHHHhhhcCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHhcc
Q 005257          578 --EMVWELMVQGKLLDALDARLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLEGKI  640 (705)
Q Consensus       578 --~~v~~~~~~~~~~~~id~~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~  640 (705)
                        ........ ..+...+.....     .......+.+++..||+.||++||++.++++.|+...
T Consensus       269 ~~~~~~~~~~-~~~~~~~~~~~~-----~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~  327 (345)
T 2v62_A          269 AVQTAKTNLL-DELPQSVLKWAP-----SGSSCCEIAQFLVCAHSLAYDEKPNYQALKKILNPHG  327 (345)
T ss_dssp             HHHHHHHHHH-HTTTHHHHHHSC-----TTSCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHCTTC
T ss_pred             HHHHHHHhhc-ccccHHHHhhcc-----ccccHHHHHHHHHHHhhcCcccCCCHHHHHHHHhccC
Confidence              11111111 111111111111     0123356889999999999999999999999998654

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A

Probab=100.00  E-value=9.7e-40  Score=348.60  Aligned_cols=244  Identities=23%  Similarity=0.307  Sum_probs=181.8

Q ss_pred             ceEEeecCceEEEEEEEcCCCeEEEEEEeccCCchhHHHHHHHHHHhccCC-CCCcceeeeeeeeccCceEEEEeeCCCC
Q 005257          369 ENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLK-HKSLVGLRGWCKREKGSLMLVYDYMENG  447 (705)
Q Consensus       369 ~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~~~~~~~~~Ei~~l~~l~-Hpniv~l~g~~~~~~~~~~lV~E~~~~g  447 (705)
                      .+.||+|+||.||+|.+..+++.||||++...   ....+.+|+.++..++ ||||+++++++.. +...++||||+++|
T Consensus        16 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~e~~~l~~l~~h~niv~~~~~~~~-~~~~~lv~e~~~~~   91 (325)
T 3kn6_A           16 DKPLGEGSFSICRKCVHKKSNQAFAVKIISKR---MEANTQKEITALKLCEGHPNIVKLHEVFHD-QLHTFLVMELLNGG   91 (325)
T ss_dssp             SCCSEEETTEEEEEEEETTTCCEEEEEEEEGG---GHHHHHHHHHHHHHTTTCTTBCCEEEEEEC-SSEEEEEECCCCSC
T ss_pred             CCccccCCCeEEEEEEECCCCCEEEEEEEChh---hhhhHHHHHHHHHHhcCCCCeeEEEEEEEc-CCEEEEEEEccCCC
Confidence            47899999999999999999999999998643   4467789999999997 9999999999876 67899999999999


Q ss_pred             ChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCC---CeeeeeeccceecCCCCcc
Q 005257          448 SLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEM---NGRLGDFGLARMHGHGQVA  524 (705)
Q Consensus       448 sL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~---~~kL~DFGla~~~~~~~~~  524 (705)
                      +|.+++....   .+++.++..++.|++.||.|||+   ++|+||||||+|||++.++   .+||+|||+++....... 
T Consensus        92 ~L~~~l~~~~---~~~~~~~~~i~~qi~~~l~~LH~---~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~-  164 (325)
T 3kn6_A           92 ELFERIKKKK---HFSETEASYIMRKLVSAVSHMHD---VGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQ-  164 (325)
T ss_dssp             BHHHHHHHCS---CCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEEEC----CEEEECCCTTCEECCC----
T ss_pred             cHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHH---CCCeecCCCHHHEEEecCCCcccEEEeccccceecCCCCC-
Confidence            9999997643   69999999999999999999998   9999999999999998665   799999999987654332 


Q ss_pred             eeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhhCCCCCCCCCcc----HHHHHHHHHHhCchhHHHHHhhhcC
Q 005257          525 STTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPN----LVEMVWELMVQGKLLDALDARLRAK  600 (705)
Q Consensus       525 ~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~----~~~~v~~~~~~~~~~~~id~~l~~~  600 (705)
                      ......||+.|+|||++.+..++.++|||||||++|||++|+.||......    ....+...+..+.            
T Consensus       165 ~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~i~~~~------------  232 (325)
T 3kn6_A          165 PLKTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKGD------------  232 (325)
T ss_dssp             -------------------CCCCHHHHHHHHHHHHHHHHHSSCTTC-------CCCHHHHHHHHTTTC------------
T ss_pred             cccccCCCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCccccccccHHHHHHHHHcCC------------
Confidence            223457899999999999999999999999999999999999999764321    1111122222221            


Q ss_pred             CCCC----HHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 005257          601 GGFD----EDEVERVLHLGLLCAYPDPRARPTMRQVVKV  635 (705)
Q Consensus       601 ~~~~----~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  635 (705)
                      ..+.    ......+.+++..||+.||++|||+.|++++
T Consensus       233 ~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~h  271 (325)
T 3kn6_A          233 FSFEGEAWKNVSQEAKDLIQGLLTVDPNKRLKMSGLRYN  271 (325)
T ss_dssp             CCCCSHHHHTSCHHHHHHHHHHHCCCTTTCCCTTTSTTC
T ss_pred             CCCCcccccCCCHHHHHHHHHHCCCChhHCCCHHHHhcC
Confidence            1111    1234678899999999999999999998864

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*

Probab=100.00  E-value=3.1e-40  Score=343.64  Aligned_cols=253  Identities=30%  Similarity=0.423  Sum_probs=201.0

Q ss_pred             hCCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCCchhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEEEEe
Q 005257          363 TKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYD  442 (705)
Q Consensus       363 t~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~lV~E  442 (705)
                      .++|...+.||+|+||.||+|.+.  ++.||||+++..  ...+.+.+|++++++++||||+++++++....+..++|||
T Consensus        20 ~~~y~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~--~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e   95 (278)
T 1byg_A           20 MKELKLLQTIGKGEFGDVMLGDYR--GNKVAVKCIKND--ATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTE   95 (278)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEET--TEEEEEEECCCC--C--HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEEC
T ss_pred             hhhceEEeEEecCCCceEEEEEEc--CCEEEEEEecch--hHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCceEEEEe
Confidence            457888999999999999999885  789999998644  3457899999999999999999999998765668899999


Q ss_pred             eCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecCCCC
Q 005257          443 YMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQ  522 (705)
Q Consensus       443 ~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~~~~  522 (705)
                      |+++++|.+++..... ..+++..++.++.|++.||.|||+   .+++||||||+||+++.++.+||+|||+++......
T Consensus        96 ~~~~~~L~~~l~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~  171 (278)
T 1byg_A           96 YMAKGSLVDYLRSRGR-SVLGGDCLLKFSLDVCEAMEYLEG---NNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ  171 (278)
T ss_dssp             CCTTEEHHHHHHHHHH-HHCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECTTSCEEECCCCC--------
T ss_pred             cCCCCCHHHHHHhccc-ccCCHHHHHHHHHHHHHHHHHHHh---CCccccCCCcceEEEeCCCcEEEeeccccccccccc
Confidence            9999999999976432 148899999999999999999998   999999999999999999999999999997654322


Q ss_pred             cceeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhh-CCCCCCCCCccHHHHHHHHHHhCchhHHHHHhhhcCC
Q 005257          523 VASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLS-GRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRAKG  601 (705)
Q Consensus       523 ~~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~Ellt-G~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~l~~~~  601 (705)
                          ....+++.|+|||.+.+..++.++||||||+++|||++ |+.||.......   +...+..+         ..  .
T Consensus       172 ----~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~---~~~~~~~~---------~~--~  233 (278)
T 1byg_A          172 ----DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKD---VVPRVEKG---------YK--M  233 (278)
T ss_dssp             --------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGGG---HHHHHTTT---------CC--C
T ss_pred             ----cCCCccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCCHHH---HHHHHhcC---------CC--C
Confidence                22357889999999998899999999999999999998 999997644211   11111111         11  1


Q ss_pred             CCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHhccc
Q 005257          602 GFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLEGKIE  641 (705)
Q Consensus       602 ~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~  641 (705)
                      ..+......+.+++..||+.||++||++.++++.|+....
T Consensus       234 ~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~i~~  273 (278)
T 1byg_A          234 DAPDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHIKT  273 (278)
T ss_dssp             CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             CCcccCCHHHHHHHHHHhcCChhhCCCHHHHHHHHHHHHh
Confidence            2233345678899999999999999999999999987644

>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}

Probab=100.00  E-value=1.9e-39  Score=364.01  Aligned_cols=264  Identities=21%  Similarity=0.282  Sum_probs=211.5

Q ss_pred             hCCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCCchhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEEEEe
Q 005257          363 TKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYD  442 (705)
Q Consensus       363 t~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~lV~E  442 (705)
                      .++|...++||+|+||.||+|.+..+++.||||++.....  .+++.+|++++..|+|++.+..+.++.......+||||
T Consensus         6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~--~~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~lvme   83 (483)
T 3sv0_A            6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK--HPQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVLVMD   83 (483)
T ss_dssp             TTTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCS--SCCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEEEEE
T ss_pred             CCcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEeccccc--cHHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEEEEE
Confidence            4678999999999999999999998999999998765433  24578999999999887666666666555778899999


Q ss_pred             eCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEE---ccCCCeeeeeeccceecC
Q 005257          443 YMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLL---DKEMNGRLGDFGLARMHG  519 (705)
Q Consensus       443 ~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILl---d~~~~~kL~DFGla~~~~  519 (705)
                      |+ +++|.+++.....  .+++.+++.++.||+.||.|||+   ++|+||||||+||||   +.++.+||+|||+++...
T Consensus        84 ~~-g~sL~~ll~~~~~--~l~~~~~~~i~~qi~~aL~yLH~---~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~  157 (483)
T 3sv0_A           84 LL-GPSLEDLFNFCSR--KLSLKTVLMLADQMINRVEFVHS---KSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYR  157 (483)
T ss_dssp             CC-CCBHHHHHHHTTT--CCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECCGGGTTCEEECCCTTCEECB
T ss_pred             CC-CCCHHHHHHhhcC--CCCHHHHHHHHHHHHHHHHHHHH---CCEeecccCcceEEEecCCCCCeEEEEeCCcceecc
Confidence            99 9999999976443  69999999999999999999999   999999999999999   688999999999998776


Q ss_pred             CCCcc------eeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhHHH
Q 005257          520 HGQVA------STTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDAL  593 (705)
Q Consensus       520 ~~~~~------~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~~i  593 (705)
                      .....      ......||+.|+|||++.+..++.++|||||||++|||++|+.||..............+........+
T Consensus       158 ~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~  237 (483)
T 3sv0_A          158 DTSTHQHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVATSI  237 (483)
T ss_dssp             CTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSHHHHHHHHHHHHHHSCH
T ss_pred             CCccccccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccchhHHHHHHHHhhccccccH
Confidence            54321      122468999999999999999999999999999999999999999875432222222222221111111


Q ss_pred             HHhhhcCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHhccc
Q 005257          594 DARLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLEGKIE  641 (705)
Q Consensus       594 d~~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~  641 (705)
                      ....   ..+    ...+.+++..||+.||++||++.+|++.|+.+..
T Consensus       238 ~~l~---~~~----p~~l~~li~~cl~~dP~~RPs~~el~~~L~~l~~  278 (483)
T 3sv0_A          238 EALC---RGY----PTEFASYFHYCRSLRFDDKPDYSYLKRLFRDLFI  278 (483)
T ss_dssp             HHHH---TTS----CHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHH
T ss_pred             HHHh---cCC----cHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHH
Confidence            1111   112    3568899999999999999999999999998765

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*

Probab=100.00  E-value=1.9e-40  Score=344.95  Aligned_cols=258  Identities=23%  Similarity=0.340  Sum_probs=208.8

Q ss_pred             hCCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCC--chhHHHHHHHHHHhccCCCCCcceeeeeeee-ccCceEE
Q 005257          363 TKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHEN--DGGTRAFLAEISSLGRLKHKSLVGLRGWCKR-EKGSLML  439 (705)
Q Consensus       363 t~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~--~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~-~~~~~~l  439 (705)
                      .++|+..+.||+|+||.||++....+++.||+|++....  ....+.+.+|++++++++||||+++++++.. .....++
T Consensus         5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~l   84 (279)
T 2w5a_A            5 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYI   84 (279)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEEE
T ss_pred             hhheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEEE
Confidence            357888999999999999999999899999999997543  3456679999999999999999999998764 3567899


Q ss_pred             EEeeCCCCChhHHHHhcC-CCCcccHHHHHHHHHHHHHHHHHHhcCCCCC-----eeecCCCCCCeEEccCCCeeeeeec
Q 005257          440 VYDYMENGSLDKWIFQCD-GSMMLSCEERIRVLKDVAAGVLYLHEGWEKK-----VLHRDIKSSNVLLDKEMNGRLGDFG  513 (705)
Q Consensus       440 V~E~~~~gsL~~~L~~~~-~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~-----iiHrDLkp~NILld~~~~~kL~DFG  513 (705)
                      ||||+++++|.+++.... ....+++.+++.++.|++.||.|||+   .+     ++||||||+|||++.++.+||+|||
T Consensus        85 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~---~~~~~~~ivH~dl~p~NIl~~~~~~~kl~dfg  161 (279)
T 2w5a_A           85 VMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHR---RSDGGHTVLHRDLKPANVFLDGKQNVKLGDFG  161 (279)
T ss_dssp             EEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHH---HC------CCCCCSGGGEEECSSSCEEECCCC
T ss_pred             EEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhc---ccCCCCeeEEeccchhhEEEcCCCCEEEecCc
Confidence            999999999999997642 22359999999999999999999998   67     9999999999999999999999999


Q ss_pred             cceecCCCCcceeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhHHH
Q 005257          514 LARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDAL  593 (705)
Q Consensus       514 la~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~~i  593 (705)
                      +++........ .....||+.|+|||++.+..++.++||||||+++|||++|+.||.....   ..+...+..+..    
T Consensus       162 ~~~~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~---~~~~~~i~~~~~----  233 (279)
T 2w5a_A          162 LARILNHDTSF-AKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQ---KELAGKIREGKF----  233 (279)
T ss_dssp             HHHHC---CHH-HHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCSSH---HHHHHHHHHTCC----
T ss_pred             hheeecccccc-ccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCcccCH---HHHHHHHhhccc----
Confidence            99876543221 1234689999999999988999999999999999999999999986542   112222222221    


Q ss_pred             HHhhhcCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHh
Q 005257          594 DARLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLEG  638 (705)
Q Consensus       594 d~~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  638 (705)
                             ...+......+.+++..||+.||++||++.|+++.+..
T Consensus       234 -------~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~~~~  271 (279)
T 2w5a_A          234 -------RRIPYRYSDELNEIITRMLNLKDYHRPSVEEILENPLI  271 (279)
T ss_dssp             -------CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSTTC
T ss_pred             -------ccCCcccCHHHHHHHHHHcCCCcccCCCHHHHHhChhh
Confidence                   11222344678899999999999999999999987653

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*

Probab=100.00  E-value=1.3e-39  Score=346.27  Aligned_cols=298  Identities=26%  Similarity=0.382  Sum_probs=201.6

Q ss_pred             hCCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCCc-hhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEEEE
Q 005257          363 TKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHEND-GGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVY  441 (705)
Q Consensus       363 t~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~-~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~lV~  441 (705)
                      .++|+..+.||+|+||.||+|.+..+++.||||+++.... ...+.+.+|++++++++||||+++++++.. ++..++||
T Consensus         4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~~lv~   82 (317)
T 2pmi_A            4 SSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHT-ENKLTLVF   82 (317)
T ss_dssp             ---------------CEEEEEECSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTCCBTTBCCEEEEECC-TTEEEEEE
T ss_pred             ccceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeecccccccHHHHHHHHHHHHhcCCCCcceEEEEEEE-CCeEEEEE
Confidence            4678899999999999999999998999999999976533 345778999999999999999999998876 67899999


Q ss_pred             eeCCCCChhHHHHhcC---CCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceec
Q 005257          442 DYMENGSLDKWIFQCD---GSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMH  518 (705)
Q Consensus       442 E~~~~gsL~~~L~~~~---~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~  518 (705)
                      ||++ |+|.+++....   ....+++..+..++.||+.||.|||+   .+|+||||||+|||++.++.+||+|||+++..
T Consensus        83 e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~---~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~  158 (317)
T 2pmi_A           83 EFMD-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHE---NKILHRDLKPQNLLINKRGQLKLGDFGLARAF  158 (317)
T ss_dssp             ECCC-CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECCCSSCEET
T ss_pred             EecC-CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHH---CCeeeCCCChHHeEEcCCCCEEECcCccceec
Confidence            9998 59999987532   12358999999999999999999998   99999999999999999999999999999876


Q ss_pred             CCCCcceeeeeeccccCCCcccccc-CCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhHHHHHhh
Q 005257          519 GHGQVASTTRVVGTVGYLAPEVFSS-GRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDARL  597 (705)
Q Consensus       519 ~~~~~~~~~~~~gt~~y~APE~~~~-~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~l  597 (705)
                      ..... ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||......  +......          ..+
T Consensus       159 ~~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~--~~~~~i~----------~~~  225 (317)
T 2pmi_A          159 GIPVN-TFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDE--EQLKLIF----------DIM  225 (317)
T ss_dssp             TSCCC-CCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH--HHHHHHH----------HHH
T ss_pred             CCCcc-cCCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChH--HHHHHHH----------HHh
Confidence            53322 1223578999999999876 46899999999999999999999999765421  1110000          000


Q ss_pred             hcCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHhccccCCCCCcchhhHHHHHHhhccccccccccccccCCC
Q 005257          598 RAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLEGKIEAGIENETEDMDAYLLQQVKSKDMWANYSRSFGYGYA  677 (705)
Q Consensus       598 ~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~  677 (705)
                         +..+......+..+.  -..++...++. .++.+.+....       .......+.+++..+...+|..|.++.+++
T Consensus       226 ---~~~~~~~~~~~~~~~--~~~~~~~~~~~-~~~~~~~~~~~-------~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l  292 (317)
T 2pmi_A          226 ---GTPNESLWPSVTKLP--KYNPNIQQRPP-RDLRQVLQPHT-------KEPLDGNLMDFLHGLLQLNPDMRLSAKQAL  292 (317)
T ss_dssp             ---CSCCTTTCGGGGGCT--TCCTTCCCCCC-CCSHHHHGGGC-------SSCCCHHHHHHHHHHSCSSGGGSCCHHHHT
T ss_pred             ---CCCChhHhhhhhhhh--hcccccccccc-hhHHHhhcccc-------cccCCHHHHHHHHHHCCCCcccCCCHHHHh
Confidence               000000000000000  00001111110 11111221111       112344577788888889999999999999


Q ss_pred             CCCCcccccccccc
Q 005257          678 THPTFHDIRQSNSY  691 (705)
Q Consensus       678 ~hp~f~~~~~~~~~  691 (705)
                      .||||.+.......
T Consensus       293 ~hp~f~~~~~~~~~  306 (317)
T 2pmi_A          293 HHPWFAEYYHHASM  306 (317)
T ss_dssp             TSGGGGGGCC----
T ss_pred             CChhhhcccchhhc
Confidence            99999987755443

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}

Probab=100.00  E-value=4.3e-39  Score=351.96  Aligned_cols=204  Identities=28%  Similarity=0.430  Sum_probs=167.4

Q ss_pred             HhCCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccC--CchhHHHHHHHHHHhccCC-CCCcceeeeeeeecc-Cce
Q 005257          362 ATKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHE--NDGGTRAFLAEISSLGRLK-HKSLVGLRGWCKREK-GSL  437 (705)
Q Consensus       362 at~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~--~~~~~~~~~~Ei~~l~~l~-Hpniv~l~g~~~~~~-~~~  437 (705)
                      ..++|...+.||+|+||.||+|.+..+++.||||++...  .....+.+.+|+.++.+++ ||||+++++++..++ ..+
T Consensus         7 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~~   86 (388)
T 3oz6_A            7 VLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRDV   86 (388)
T ss_dssp             HHTTEEEEEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSCE
T ss_pred             ccCceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCEE
Confidence            456899999999999999999999999999999998654  3345667889999999997 999999999987533 468


Q ss_pred             EEEEeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeecccee
Q 005257          438 MLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARM  517 (705)
Q Consensus       438 ~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~  517 (705)
                      ++|||||+ ++|..++...    .+++..+..++.|++.||.|||+   .+|+||||||+|||++.++.+||+|||+++.
T Consensus        87 ~lv~e~~~-~~L~~~~~~~----~~~~~~~~~i~~qi~~~L~~LH~---~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~  158 (388)
T 3oz6_A           87 YLVFDYME-TDLHAVIRAN----ILEPVHKQYVVYQLIKVIKYLHS---GGLLHRDMKPSNILLNAECHVKVADFGLSRS  158 (388)
T ss_dssp             EEEEECCS-EEHHHHHHHT----CCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECCCTTCEE
T ss_pred             EEEecccC-cCHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHh---CCEEeCCCCHHHeEEcCCCCEEecCCccccc
Confidence            99999997 5999998652    58999999999999999999999   9999999999999999999999999999987


Q ss_pred             cCCC--------------------CcceeeeeeccccCCCcccccc-CCCCccccEEEEehhHHHHhhCCCCCCCCC
Q 005257          518 HGHG--------------------QVASTTRVVGTVGYLAPEVFSS-GRASTQTDVFGFGILILEVLSGRRPIEEGK  573 (705)
Q Consensus       518 ~~~~--------------------~~~~~~~~~gt~~y~APE~~~~-~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~  573 (705)
                      ....                    .....+..+||+.|+|||++.+ ..++.++|||||||++|||++|+.||.+..
T Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~  235 (388)
T 3oz6_A          159 FVNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSS  235 (388)
T ss_dssp             SSSCCCCCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSS
T ss_pred             ccccccccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCC
Confidence            5431                    1112344689999999999976 678999999999999999999999998654

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*

Probab=100.00  E-value=1.2e-39  Score=342.11  Aligned_cols=250  Identities=24%  Similarity=0.375  Sum_probs=208.2

Q ss_pred             hCCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccC---CchhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEE
Q 005257          363 TKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHE---NDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLML  439 (705)
Q Consensus       363 t~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~---~~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~l  439 (705)
                      .++|...+.||+|+||.||++.+..+++.||+|++...   .....+.+.+|+.+++.++||||+++++++.. .+..++
T Consensus        14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~l   92 (294)
T 2rku_A           14 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFED-NDFVFV   92 (294)
T ss_dssp             TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEC-SSEEEE
T ss_pred             ccceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeecc-CCEEEE
Confidence            35688899999999999999999999999999998654   23445678999999999999999999999876 678899


Q ss_pred             EEeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecC
Q 005257          440 VYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHG  519 (705)
Q Consensus       440 V~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~  519 (705)
                      ||||+++++|.+++....   .+++.+++.++.|++.||.|||+   .+++||||||+|||++.++.+||+|||+++...
T Consensus        93 v~e~~~~~~L~~~~~~~~---~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~  166 (294)
T 2rku_A           93 VLELCRRRSLLELHKRRK---ALTEPEARYYLRQIVLGCQYLHR---NRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVE  166 (294)
T ss_dssp             EEECCTTCBHHHHHHHHC---SCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECCCTTCEECC
T ss_pred             EEecCCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHH---CCccccCCChHhEEEcCCCCEEEEeccCceecc
Confidence            999999999999987643   68999999999999999999999   999999999999999999999999999998765


Q ss_pred             CCCcceeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhHHHHHhhhc
Q 005257          520 HGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRA  599 (705)
Q Consensus       520 ~~~~~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~l~~  599 (705)
                      .... ......||+.|+|||++.+..++.++||||||+++|||++|+.||......  +. ...+..+.           
T Consensus       167 ~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~--~~-~~~~~~~~-----------  231 (294)
T 2rku_A          167 YDGE-RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLK--ET-YLRIKKNE-----------  231 (294)
T ss_dssp             STTC-CBCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHH--HH-HHHHHTTC-----------
T ss_pred             cCcc-ccccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH--HH-HHHHhhcc-----------
Confidence            3322 223357899999999999888999999999999999999999999764421  11 11111111           


Q ss_pred             CCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 005257          600 KGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKV  635 (705)
Q Consensus       600 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  635 (705)
                       ...+......+.+++..||+.||++|||+.|+++.
T Consensus       232 -~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~  266 (294)
T 2rku_A          232 -YSIPKHINPVAASLIQKMLQTDPTARPTINELLND  266 (294)
T ss_dssp             -CCCCTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred             -CCCccccCHHHHHHHHHHcccChhhCcCHHHHhhC
Confidence             11222334568889999999999999999998874

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}

Probab=100.00  E-value=6.3e-40  Score=342.99  Aligned_cols=253  Identities=23%  Similarity=0.315  Sum_probs=199.5

Q ss_pred             CCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCC-chhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEEEEe
Q 005257          364 KGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHEN-DGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYD  442 (705)
Q Consensus       364 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~-~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~lV~E  442 (705)
                      ++|...+.||+|+||.||++....++..||+|++.... ....+.+.+|++++++++||||+++++++.. ....++|||
T Consensus        22 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~~lv~e  100 (285)
T 3is5_A           22 DLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFED-YHNMYIVME  100 (285)
T ss_dssp             HHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCCCTTBCCEEEEEEC-SSEEEEEEC
T ss_pred             hheeecceeccCCCeEEEEEEEccCCceEEEEEeeccccchhHHHHHHHHHHHHhCCCchHHhHHHheec-CCeEEEEEE
Confidence            56888999999999999999999999999999987653 3346789999999999999999999999876 678999999


Q ss_pred             eCCCCChhHHHHhcC-CCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEE---ccCCCeeeeeeccceec
Q 005257          443 YMENGSLDKWIFQCD-GSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLL---DKEMNGRLGDFGLARMH  518 (705)
Q Consensus       443 ~~~~gsL~~~L~~~~-~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILl---d~~~~~kL~DFGla~~~  518 (705)
                      |+++|+|.+++.... ....+++..++.++.|++.||.|||+   .+|+||||||+|||+   +.++.+||+|||+++..
T Consensus       101 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~---~~ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~~~  177 (285)
T 3is5_A          101 TCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHS---QHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELF  177 (285)
T ss_dssp             CCSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCSGGGEEESSSSTTCCEEECCCCCCCC-
T ss_pred             eCCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHh---CCEEECCCCHHHEEEecCCCCCCEEEEeeecceec
Confidence            999999999986531 12369999999999999999999998   999999999999999   45678999999999866


Q ss_pred             CCCCcceeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhHHHHHhhh
Q 005257          519 GHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDARLR  598 (705)
Q Consensus       519 ~~~~~~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~l~  598 (705)
                      ....  ......||+.|+|||++. +.++.++|||||||++|||++|+.||......   ...........      .. 
T Consensus       178 ~~~~--~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~il~~ll~g~~pf~~~~~~---~~~~~~~~~~~------~~-  244 (285)
T 3is5_A          178 KSDE--HSTNAAGTALYMAPEVFK-RDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLE---EVQQKATYKEP------NY-  244 (285)
T ss_dssp             -----------CTTGGGCCHHHHT-TCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHH---HHHHHHHHCCC------CC-
T ss_pred             CCcc--cCcCcccccCcCChHHhc-cCCCcccCeehHHHHHHHHHhCCCCCCCCCHH---HHHhhhccCCc------cc-
Confidence            5432  223457899999999986 57899999999999999999999999865421   11111111100      00 


Q ss_pred             cCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 005257          599 AKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKV  635 (705)
Q Consensus       599 ~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  635 (705)
                        ..........+.+++..||+.||++|||+.|+++.
T Consensus       245 --~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~h  279 (285)
T 3is5_A          245 --AVECRPLTPQAVDLLKQMLTKDPERRPSAAQVLHH  279 (285)
T ss_dssp             --CC--CCCCHHHHHHHHHHTCSCTTTSCCHHHHHTS
T ss_pred             --ccccCcCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence              00000123567889999999999999999999863

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*

Probab=100.00  E-value=6e-40  Score=349.94  Aligned_cols=258  Identities=28%  Similarity=0.455  Sum_probs=207.4

Q ss_pred             CCCCcceEEeecCceEEEEEEEcCCCeEE--EEEEeccC-CchhHHHHHHHHHHhccC-CCCCcceeeeeeeeccCceEE
Q 005257          364 KGFSEENVIGVGGNGKVYKGVLEGGGAEI--AVKRISHE-NDGGTRAFLAEISSLGRL-KHKSLVGLRGWCKREKGSLML  439 (705)
Q Consensus       364 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~v--avK~i~~~-~~~~~~~~~~Ei~~l~~l-~Hpniv~l~g~~~~~~~~~~l  439 (705)
                      ++|...+.||+|+||.||+|.+..++..+  |+|++... .....+.+.+|++++.++ +||||+++++++.. .+..++
T Consensus        25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~-~~~~~l  103 (327)
T 1fvr_A           25 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEH-RGYLYL  103 (327)
T ss_dssp             GGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEE-TTEEEE
T ss_pred             HHccceeeeecCCCceEEEEEEccCCcccceeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhhceeeee-CCceEE
Confidence            57888999999999999999998888755  99988754 334456789999999999 89999999999876 678999


Q ss_pred             EEeeCCCCChhHHHHhcC-------------CCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCC
Q 005257          440 VYDYMENGSLDKWIFQCD-------------GSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMN  506 (705)
Q Consensus       440 V~E~~~~gsL~~~L~~~~-------------~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~  506 (705)
                      ||||+++|+|.+++....             ....+++.+++.++.|++.||.|||+   ++|+||||||+|||++.++.
T Consensus       104 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~dlkp~NIl~~~~~~  180 (327)
T 1fvr_A          104 AIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQ---KQFIHRDLAARNILVGENYV  180 (327)
T ss_dssp             EECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECGGGC
T ss_pred             EEecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHh---CCccCCCCccceEEEcCCCe
Confidence            999999999999997643             12368999999999999999999998   99999999999999999999


Q ss_pred             eeeeeeccceecCCCCcceeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhh-CCCCCCCCCccHHHHHHHHHH
Q 005257          507 GRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLS-GRRPIEEGKPNLVEMVWELMV  585 (705)
Q Consensus       507 ~kL~DFGla~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~Ellt-G~~Pf~~~~~~~~~~v~~~~~  585 (705)
                      +||+|||+++.....  .......+++.|+|||++.+..++.++|||||||++|||++ |+.||......   .....+.
T Consensus       181 ~kL~Dfg~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~---~~~~~~~  255 (327)
T 1fvr_A          181 AKIADFGLSRGQEVY--VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCA---ELYEKLP  255 (327)
T ss_dssp             EEECCTTCEESSCEE--CCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHH---HHHHHGG
T ss_pred             EEEcccCcCcccccc--ccccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCCCCCcHH---HHHHHhh
Confidence            999999999743221  11223456889999999988889999999999999999998 99999765421   1111111


Q ss_pred             hCchhHHHHHhhhcCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHhccc
Q 005257          586 QGKLLDALDARLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLEGKIE  641 (705)
Q Consensus       586 ~~~~~~~id~~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~  641 (705)
                      .+         ..  ...+......+.+++..||+.||.+|||+.++++.|+...+
T Consensus       256 ~~---------~~--~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~  300 (327)
T 1fvr_A          256 QG---------YR--LEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLE  300 (327)
T ss_dssp             GT---------CC--CCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             cC---------CC--CCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHH
Confidence            11         11  12223344678899999999999999999999999987765

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*

Probab=100.00  E-value=2.2e-40  Score=352.16  Aligned_cols=267  Identities=25%  Similarity=0.399  Sum_probs=209.4

Q ss_pred             CCcceEEeecCceEEEEEEE----cCCCeEEEEEEeccCCc-hhHHHHHHHHHHhccCCCCCcceeeeeeeec-cCceEE
Q 005257          366 FSEENVIGVGGNGKVYKGVL----EGGGAEIAVKRISHEND-GGTRAFLAEISSLGRLKHKSLVGLRGWCKRE-KGSLML  439 (705)
Q Consensus       366 f~~~~~LG~G~fg~Vy~~~~----~~~~~~vavK~i~~~~~-~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~-~~~~~l  439 (705)
                      |...+.||+|+||+||++.+    ..+++.||||++..... ...+.+.+|++++++++||||+++++++... ...+++
T Consensus        33 ~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~l  112 (318)
T 3lxp_A           33 LKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQL  112 (318)
T ss_dssp             EEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTTEEEE
T ss_pred             HhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCceEEE
Confidence            47889999999999988865    34688999999976543 4467799999999999999999999998764 356899


Q ss_pred             EEeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecC
Q 005257          440 VYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHG  519 (705)
Q Consensus       440 V~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~  519 (705)
                      ||||+++|+|.+++...    .+++.+++.++.|++.||.|||+   .+|+||||||+|||++.++.+||+|||+++...
T Consensus       113 v~e~~~~~~L~~~l~~~----~~~~~~~~~i~~~l~~~l~~LH~---~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~  185 (318)
T 3lxp_A          113 VMEYVPLGSLRDYLPRH----SIGLAQLLLFAQQICEGMAYLHA---QHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVP  185 (318)
T ss_dssp             EECCCTTCBHHHHGGGS----CCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTCCEEECCGGGCEECC
T ss_pred             EEecccCCcHHHHHhhC----CCCHHHHHHHHHHHHHHHHHHHh---CCccCCCCchheEEEcCCCCEEECCcccccccc
Confidence            99999999999999653    48999999999999999999999   999999999999999999999999999998876


Q ss_pred             CCCcc--eeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHH---HHHHHhCchhHHHH
Q 005257          520 HGQVA--STTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMV---WELMVQGKLLDALD  594 (705)
Q Consensus       520 ~~~~~--~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v---~~~~~~~~~~~~id  594 (705)
                      .....  ......||..|+|||++.+..++.++|||||||++|||++|+.||...........   ........+.+.+.
T Consensus       186 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  265 (318)
T 3lxp_A          186 EGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLE  265 (318)
T ss_dssp             TTCSEEEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCHHHHHHHHHHHHH
T ss_pred             ccccccccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccccchhhhhhhcccccchhHHHHHHHHh
Confidence            54322  12334678899999999988899999999999999999999999865321110000   00000011112222


Q ss_pred             HhhhcCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHhccc
Q 005257          595 ARLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLEGKIE  641 (705)
Q Consensus       595 ~~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~  641 (705)
                      ....  ...+......+.+++..||+.||++|||+.|+++.|+...+
T Consensus       266 ~~~~--~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~  310 (318)
T 3lxp_A          266 RGER--LPRPDKCPAEVYHLMKNCWETEASFRPTFENLIPILKTVHE  310 (318)
T ss_dssp             TTCC--CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             cccC--CCCCccccHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHH
Confidence            2111  22334455778999999999999999999999999987655

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*

Probab=100.00  E-value=8.1e-40  Score=371.94  Aligned_cols=255  Identities=27%  Similarity=0.395  Sum_probs=210.9

Q ss_pred             HhCCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccC---CchhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceE
Q 005257          362 ATKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHE---NDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLM  438 (705)
Q Consensus       362 at~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~---~~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~  438 (705)
                      ..++|...+.||+|+||.||+|.+..+++.||||++...   .......+.+|+.+|..++||||+++++++.. ++.++
T Consensus       182 ~~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~-~~~l~  260 (576)
T 2acx_A          182 TKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYET-KDALC  260 (576)
T ss_dssp             CGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEEC-SSEEE
T ss_pred             cccceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEee-CCEEE
Confidence            346788999999999999999999999999999998653   22345678899999999999999999998876 67899


Q ss_pred             EEEeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceec
Q 005257          439 LVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMH  518 (705)
Q Consensus       439 lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~  518 (705)
                      +||||+++|+|.+++..... ..+++..++.++.||+.||.|||+   ++|+||||||+|||++.++.+||+|||+++..
T Consensus       261 lVmEy~~gg~L~~~l~~~~~-~~l~e~~~~~i~~qIl~aL~yLH~---~gIvHrDLKPeNILld~~g~vKL~DFGla~~~  336 (576)
T 2acx_A          261 LVLTLMNGGDLKFHIYHMGQ-AGFPEARAVFYAAEICCGLEDLHR---ERIVYRDLKPENILLDDHGHIRISDLGLAVHV  336 (576)
T ss_dssp             EEECCCCSCBHHHHHHSSSS-CCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTSCEEECCCTTCEEC
T ss_pred             EEEEcCCCCcHHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHH---CCEeccCCchheEEEeCCCCeEEEecccceec
Confidence            99999999999999976542 259999999999999999999999   99999999999999999999999999999876


Q ss_pred             CCCCcceeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhhCCCCCCCCCcc-HHHHHHHHHHhCchhHHHHHhh
Q 005257          519 GHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPN-LVEMVWELMVQGKLLDALDARL  597 (705)
Q Consensus       519 ~~~~~~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~-~~~~v~~~~~~~~~~~~id~~l  597 (705)
                      .....  ....+||+.|+|||++.+..++.++|||||||++|||++|+.||...... ....+...+...          
T Consensus       337 ~~~~~--~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~~~~~~i~~~i~~~----------  404 (576)
T 2acx_A          337 PEGQT--IKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEV----------  404 (576)
T ss_dssp             CTTCC--EECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSCCCHHHHHHHHHHC----------
T ss_pred             ccCcc--ccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcccccchhHHHHHHHhhcc----------
Confidence            54432  23358999999999999888999999999999999999999999864321 111111111111          


Q ss_pred             hcCCCCCHHHHHHHHHHHHHcCCCCCCCCC-----CHHHHHHH
Q 005257          598 RAKGGFDEDEVERVLHLGLLCAYPDPRARP-----TMRQVVKV  635 (705)
Q Consensus       598 ~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP-----s~~evl~~  635 (705)
                        ...++......+.+++..||+.||.+||     ++.|++++
T Consensus       405 --~~~~p~~~s~~~~dLI~~lL~~dP~~R~g~~~~sa~eil~H  445 (576)
T 2acx_A          405 --PEEYSERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKEH  445 (576)
T ss_dssp             --CCCCCTTSCHHHHHHHHHHTCSSGGGSTTCSSSHHHHHHTS
T ss_pred             --cccCCccCCHHHHHHHHHhccCCHHHcCCCCCCCHHHHHhC
Confidence              1223334456788999999999999999     78888764

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}

Probab=100.00  E-value=3.8e-40  Score=353.28  Aligned_cols=243  Identities=23%  Similarity=0.345  Sum_probs=204.1

Q ss_pred             hCCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCCc--------hhHHHHHHHHHHhccCCCCCcceeeeeeeecc
Q 005257          363 TKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHEND--------GGTRAFLAEISSLGRLKHKSLVGLRGWCKREK  434 (705)
Q Consensus       363 t~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~--------~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~  434 (705)
                      .++|...+.||+|+||.||+|.+..+++.||||++.....        ...+.+.+|+.++++++||||+++++++.. .
T Consensus        23 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~-~  101 (335)
T 3dls_A           23 SQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFEN-Q  101 (335)
T ss_dssp             HHHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEEC-S
T ss_pred             ccceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEee-C
Confidence            4578999999999999999999999999999999976531        133467889999999999999999999876 6


Q ss_pred             CceEEEEeeCCCC-ChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeec
Q 005257          435 GSLMLVYDYMENG-SLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFG  513 (705)
Q Consensus       435 ~~~~lV~E~~~~g-sL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFG  513 (705)
                      +..++||||+.+| +|.+++....   .+++..+..++.|++.||.|||+   .+|+||||||+|||++.++.+||+|||
T Consensus       102 ~~~~lv~e~~~~g~~l~~~~~~~~---~l~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dlkp~NIll~~~~~~kL~Dfg  175 (335)
T 3dls_A          102 GFFQLVMEKHGSGLDLFAFIDRHP---RLDEPLASYIFRQLVSAVGYLRL---KDIIHRDIKDENIVIAEDFTIKLIDFG  175 (335)
T ss_dssp             SEEEEEEECCTTSCBHHHHHHTCC---CCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTSCEEECCCT
T ss_pred             CEEEEEEEeCCCCccHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHh---CCeEEeccCHHHEEEcCCCcEEEeecc
Confidence            7899999999777 9999997543   69999999999999999999999   999999999999999999999999999


Q ss_pred             cceecCCCCcceeeeeeccccCCCccccccCCC-CccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhHH
Q 005257          514 LARMHGHGQVASTTRVVGTVGYLAPEVFSSGRA-STQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDA  592 (705)
Q Consensus       514 la~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~-s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~~  592 (705)
                      +++.......  .....||+.|+|||++.+..+ +.++|||||||++|||++|+.||.....                 .
T Consensus       176 ~a~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~-----------------~  236 (335)
T 3dls_A          176 SAAYLERGKL--FYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEE-----------------T  236 (335)
T ss_dssp             TCEECCTTCC--BCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGG-----------------G
T ss_pred             cceECCCCCc--eeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHHH-----------------H
Confidence            9987755432  234679999999999988776 8899999999999999999999965221                 0


Q ss_pred             HHHhhhcCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 005257          593 LDARLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKV  635 (705)
Q Consensus       593 id~~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  635 (705)
                      ......    .+......+.+++..||++||++|||+.++++.
T Consensus       237 ~~~~~~----~~~~~~~~l~~li~~~L~~dP~~Rps~~ell~h  275 (335)
T 3dls_A          237 VEAAIH----PPYLVSKELMSLVSGLLQPVPERRTTLEKLVTD  275 (335)
T ss_dssp             TTTCCC----CSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHHC
T ss_pred             HhhccC----CCcccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence            111111    111233568899999999999999999999885

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...

Probab=100.00  E-value=1.7e-39  Score=339.10  Aligned_cols=247  Identities=21%  Similarity=0.333  Sum_probs=206.5

Q ss_pred             CCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCC---chhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEEE
Q 005257          364 KGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHEN---DGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLV  440 (705)
Q Consensus       364 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~---~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~lV  440 (705)
                      ++|...+.||+|+||.||+|....+++.||||++....   ....+.+.+|++++++++||||+++++++.. .+..++|
T Consensus        14 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~lv   92 (284)
T 2vgo_A           14 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHD-RKRIYLM   92 (284)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEEC-SSEEEEE
T ss_pred             hhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEc-CCEEEEE
Confidence            56888999999999999999999999999999986432   2234678999999999999999999999876 6789999


Q ss_pred             EeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecCC
Q 005257          441 YDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGH  520 (705)
Q Consensus       441 ~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~~  520 (705)
                      |||+++|+|.+++....   .+++.++..++.|++.||.|||+   .+++||||||+||+++.++.+||+|||++.....
T Consensus        93 ~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~  166 (284)
T 2vgo_A           93 LEFAPRGELYKELQKHG---RFDEQRSATFMEELADALHYCHE---RKVIHRDIKPENLLMGYKGELKIADFGWSVHAPS  166 (284)
T ss_dssp             ECCCTTEEHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHT---TTEECCCCSGGGEEECTTCCEEECCCTTCEECSS
T ss_pred             EEeCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHH---CCceecCCCHHHEEEcCCCCEEEecccccccCcc
Confidence            99999999999997653   58999999999999999999998   9999999999999999999999999999976543


Q ss_pred             CCcceeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhHHHHHhhhcC
Q 005257          521 GQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRAK  600 (705)
Q Consensus       521 ~~~~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~l~~~  600 (705)
                      ..   .....|++.|+|||++.+..++.++||||||+++|||++|+.||......  + ....+....            
T Consensus       167 ~~---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~--~-~~~~~~~~~------------  228 (284)
T 2vgo_A          167 LR---RRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHT--E-THRRIVNVD------------  228 (284)
T ss_dssp             SC---BCCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHH--H-HHHHHHTTC------------
T ss_pred             cc---cccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCCCHh--H-HHHHHhccc------------
Confidence            22   22357899999999999988999999999999999999999999764421  1 111111111            


Q ss_pred             CCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 005257          601 GGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKV  635 (705)
Q Consensus       601 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  635 (705)
                      ..++......+.+++..||+.||.+||++.+++++
T Consensus       229 ~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~h  263 (284)
T 2vgo_A          229 LKFPPFLSDGSKDLISKLLRYHPPQRLPLKGVMEH  263 (284)
T ss_dssp             CCCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTC
T ss_pred             cCCCCcCCHHHHHHHHHHhhcCHhhCCCHHHHhhC
Confidence            12223334568899999999999999999999873

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}

Probab=100.00  E-value=1.6e-39  Score=363.37  Aligned_cols=196  Identities=26%  Similarity=0.346  Sum_probs=156.9

Q ss_pred             hCCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccC--CchhHHHHHHHHHHhccCCCCCcceeeeeeeec----cCc
Q 005257          363 TKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHE--NDGGTRAFLAEISSLGRLKHKSLVGLRGWCKRE----KGS  436 (705)
Q Consensus       363 t~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~--~~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~----~~~  436 (705)
                      .++|...+.||+|+||+||+|.+..+++.||||++...  .....+.+.+|+++|++++||||+++++++...    ...
T Consensus        52 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~  131 (458)
T 3rp9_A           52 PDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDE  131 (458)
T ss_dssp             CTTEEECCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCC
T ss_pred             CCCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCce
Confidence            36789999999999999999999999999999999654  234557799999999999999999999988532    256


Q ss_pred             eEEEEeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccce
Q 005257          437 LMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLAR  516 (705)
Q Consensus       437 ~~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~  516 (705)
                      +|+||||+ +++|.+++....   .+++..+..++.||+.||.|||+   .+|+||||||+|||++.++.+||+|||+++
T Consensus       132 ~~lv~e~~-~~~L~~~~~~~~---~l~~~~~~~~~~qi~~aL~~LH~---~~iiHrDlKp~NILl~~~~~~kl~DFGla~  204 (458)
T 3rp9_A          132 LYVVLEIA-DSDFKKLFRTPV---YLTELHIKTLLYNLLVGVKYVHS---AGILHRDLKPANCLVNQDCSVKVCDFGLAR  204 (458)
T ss_dssp             EEEEECCC-SEEHHHHHHSSC---CCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTCCEEECCCTTCB
T ss_pred             EEEEEecc-ccchhhhcccCC---CCCHHHHHHHHHHHHHHHHHHHh---CCcCCCCCChhhEEECCCCCEeecccccch
Confidence            89999998 469999986532   69999999999999999999999   999999999999999999999999999998


Q ss_pred             ecCCCCc--------------------------ceeeeeeccccCCCcccc-ccCCCCccccEEEEehhHHHHhhC
Q 005257          517 MHGHGQV--------------------------ASTTRVVGTVGYLAPEVF-SSGRASTQTDVFGFGILILEVLSG  565 (705)
Q Consensus       517 ~~~~~~~--------------------------~~~~~~~gt~~y~APE~~-~~~~~s~ksDVwS~Gvvl~ElltG  565 (705)
                      .......                          ...+..+||+.|+|||++ ....++.++|||||||++|||++|
T Consensus       205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~elltg  280 (458)
T 3rp9_A          205 TVDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNM  280 (458)
T ss_dssp             CTTSCTTCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHTT
T ss_pred             hccCccccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHHh
Confidence            7643211                          123446889999999986 456799999999999999999993

>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*

Probab=100.00  E-value=1.3e-39  Score=377.71  Aligned_cols=250  Identities=28%  Similarity=0.407  Sum_probs=203.0

Q ss_pred             eEEeecCceEEEEEEEc--CCCeEEEEEEeccCC--chhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEEEEeeCC
Q 005257          370 NVIGVGGNGKVYKGVLE--GGGAEIAVKRISHEN--DGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYME  445 (705)
Q Consensus       370 ~~LG~G~fg~Vy~~~~~--~~~~~vavK~i~~~~--~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~lV~E~~~  445 (705)
                      +.||+|+||.||+|.+.  .+++.||||+++...  ....+++.+|+++|.+++||||++++++|.  .+..++||||++
T Consensus       375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~--~~~~~lv~E~~~  452 (635)
T 4fl3_A          375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICE--AESWMLVMEMAE  452 (635)
T ss_dssp             EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEE--SSSEEEEEECCT
T ss_pred             CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEe--cCCEEEEEEccC
Confidence            47999999999999664  456899999997642  334678999999999999999999999985  346899999999


Q ss_pred             CCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecCCCCc--
Q 005257          446 NGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQV--  523 (705)
Q Consensus       446 ~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~~~~~--  523 (705)
                      +|+|.+++....   .+++.+++.++.||+.||.|||+   ++|+||||||+|||++.++.+||+|||+++.......  
T Consensus       453 ~g~L~~~l~~~~---~l~~~~~~~i~~qi~~~L~yLH~---~~iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~~~~  526 (635)
T 4fl3_A          453 LGPLNKYLQQNR---HVKDKNIIELVHQVSMGMKYLEE---SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYY  526 (635)
T ss_dssp             TEEHHHHHHHCT---TCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEEEETTEEEECCTTHHHHTTC-----
T ss_pred             CCCHHHHHhhCC---CCCHHHHHHHHHHHHHHHHHHHH---CCEeCCCCChHhEEEeCCCCEEEEEcCCccccccCcccc
Confidence            999999997543   68999999999999999999999   9999999999999999999999999999987654332  


Q ss_pred             ceeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhh-CCCCCCCCCccHHHHHHHHHHhCchhHHHHHhhhcCCC
Q 005257          524 ASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLS-GRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRAKGG  602 (705)
Q Consensus       524 ~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~Ellt-G~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~l~~~~~  602 (705)
                      .......+|+.|+|||++.+..++.++|||||||++|||++ |+.||......   .+...+..+..           ..
T Consensus       527 ~~~~~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~---~~~~~i~~~~~-----------~~  592 (635)
T 4fl3_A          527 KAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGS---EVTAMLEKGER-----------MG  592 (635)
T ss_dssp             --------CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHH---HHHHHHHTTCC-----------CC
T ss_pred             ccccCCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHH---HHHHHHHcCCC-----------CC
Confidence            22233456889999999999999999999999999999998 99999875432   22222322221           22


Q ss_pred             CCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHhccc
Q 005257          603 FDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLEGKIE  641 (705)
Q Consensus       603 ~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~  641 (705)
                      .+..+...+.+++..||+.||++||++.++++.|+....
T Consensus       593 ~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~~  631 (635)
T 4fl3_A          593 CPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYY  631 (635)
T ss_dssp             CCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHH
T ss_pred             CCCCCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHH
Confidence            333455678999999999999999999999999986543

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A

Probab=100.00  E-value=3.5e-39  Score=337.74  Aligned_cols=249  Identities=21%  Similarity=0.396  Sum_probs=202.3

Q ss_pred             CCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccC--CchhHHHHHHHHHHhccCCCCCcceeeeeeeec---cCceEE
Q 005257          365 GFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHE--NDGGTRAFLAEISSLGRLKHKSLVGLRGWCKRE---KGSLML  439 (705)
Q Consensus       365 ~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~--~~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~---~~~~~l  439 (705)
                      .|...+.||+|+||.||+|.+..++..||+|++...  .....+.+.+|+.++++++||||+++++++...   +..+++
T Consensus        27 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~l  106 (290)
T 1t4h_A           27 FLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVL  106 (290)
T ss_dssp             EEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEE
T ss_pred             eEEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceEEE
Confidence            467788999999999999999999999999998754  344567799999999999999999999987642   345899


Q ss_pred             EEeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCC--eeecCCCCCCeEEc-cCCCeeeeeeccce
Q 005257          440 VYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKK--VLHRDIKSSNVLLD-KEMNGRLGDFGLAR  516 (705)
Q Consensus       440 V~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~--iiHrDLkp~NILld-~~~~~kL~DFGla~  516 (705)
                      ||||+++|+|.+++....   .+++..++.++.|++.||.|||+   .+  |+||||||+|||++ .++.+||+|||++.
T Consensus       107 v~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lH~---~~~~i~H~dikp~Nil~~~~~~~~kl~Dfg~~~  180 (290)
T 1t4h_A          107 VTELMTSGTLKTYLKRFK---VMKIKVLRSWCRQILKGLQFLHT---RTPPIIHRDLKCDNIFITGPTGSVKIGDLGLAT  180 (290)
T ss_dssp             EEECCCSCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHT---SSSCCCCSCCCGGGEEESSTTSCEEECCTTGGG
T ss_pred             EEEecCCCCHHHHHHHcc---CCCHHHHHHHHHHHHHHHHHHHc---CCCCEEECCCCHHHEEEECCCCCEEEeeCCCcc
Confidence            999999999999997643   58999999999999999999998   77  99999999999998 78999999999997


Q ss_pred             ecCCCCcceeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhHHHHHh
Q 005257          517 MHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDAR  596 (705)
Q Consensus       517 ~~~~~~~~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~  596 (705)
                      ......   .....||+.|+|||++. +.++.++|||||||++|||++|+.||......  .........+......   
T Consensus       181 ~~~~~~---~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~--~~~~~~~~~~~~~~~~---  251 (290)
T 1t4h_A          181 LKRASF---AKAVIGTPEFMAPEMYE-EKYDESVDVYAFGMCMLEMATSEYPYSECQNA--AQIYRRVTSGVKPASF---  251 (290)
T ss_dssp             GCCTTS---BEESCSSCCCCCGGGGG-TCCCTHHHHHHHHHHHHHHHHSSCTTTTCSSH--HHHHHHHTTTCCCGGG---
T ss_pred             cccccc---cccccCCcCcCCHHHHh-ccCCCcchHHHHHHHHHHHHhCCCCCCCcCcH--HHHHHHHhccCCcccc---
Confidence            654332   23457899999999886 46899999999999999999999999764321  1222222222111111   


Q ss_pred             hhcCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 005257          597 LRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKV  635 (705)
Q Consensus       597 l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  635 (705)
                             +......+.+++..||+.||.+|||+.+++++
T Consensus       252 -------~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h  283 (290)
T 1t4h_A          252 -------DKVAIPEVKEIIEGCIRQNKDERYSIKDLLNH  283 (290)
T ss_dssp             -------GGCCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred             -------CCCCCHHHHHHHHHHccCChhhCCCHHHHhhC
Confidence                   11122468899999999999999999999874

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*

Probab=100.00  E-value=1.2e-39  Score=349.17  Aligned_cols=250  Identities=24%  Similarity=0.376  Sum_probs=208.0

Q ss_pred             hCCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccC---CchhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEE
Q 005257          363 TKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHE---NDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLML  439 (705)
Q Consensus       363 t~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~---~~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~l  439 (705)
                      .++|...+.||+|+||.||++.+..+++.||+|++...   .....+.+.+|+.+++.++||||+++++++.. .+..++
T Consensus        40 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-~~~~~l  118 (335)
T 2owb_A           40 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFED-NDFVFV  118 (335)
T ss_dssp             TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEC-SSEEEE
T ss_pred             CCceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEec-CCeEEE
Confidence            35688899999999999999999999999999998654   23456778999999999999999999999876 678999


Q ss_pred             EEeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecC
Q 005257          440 VYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHG  519 (705)
Q Consensus       440 V~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~  519 (705)
                      ||||+++++|.+++....   .+++.+++.++.|++.||.|||+   .+|+||||||+|||++.++.+||+|||+++...
T Consensus       119 v~e~~~~~~L~~~~~~~~---~l~~~~~~~i~~qi~~aL~~LH~---~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~  192 (335)
T 2owb_A          119 VLELCRRRSLLELHKRRK---ALTEPEARYYLRQIVLGCQYLHR---NRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVE  192 (335)
T ss_dssp             EECCCTTCBHHHHHHHHC---SCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEECTTCCEEECCCTTCEECC
T ss_pred             EEecCCCCCHHHHHhccC---CCCHHHHHHHHHHHHHHHHHHHH---CCCEecCCCchhEEEcCCCCEEEeeccCceecc
Confidence            999999999999987643   68999999999999999999999   999999999999999999999999999998765


Q ss_pred             CCCcceeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhHHHHHhhhc
Q 005257          520 HGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRA  599 (705)
Q Consensus       520 ~~~~~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~l~~  599 (705)
                      .... ......||+.|+|||++.+..++.++|||||||++|||++|+.||......  + .+..+..+.           
T Consensus       193 ~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~--~-~~~~~~~~~-----------  257 (335)
T 2owb_A          193 YDGE-RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLK--E-TYLRIKKNE-----------  257 (335)
T ss_dssp             STTC-CBCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHH--H-HHHHHHHTC-----------
T ss_pred             cCcc-cccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCCCHH--H-HHHHHhcCC-----------
Confidence            3322 223357899999999999888999999999999999999999999764321  1 111111111           


Q ss_pred             CCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 005257          600 KGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKV  635 (705)
Q Consensus       600 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  635 (705)
                       ...+......+.+++..||+.||++||++.|+++.
T Consensus       258 -~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~~  292 (335)
T 2owb_A          258 -YSIPKHINPVAASLIQKMLQTDPTARPTINELLND  292 (335)
T ss_dssp             -CCCCTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred             -CCCCccCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence             11222334567889999999999999999998873

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...

Probab=100.00  E-value=9.1e-40  Score=353.32  Aligned_cols=263  Identities=24%  Similarity=0.366  Sum_probs=208.1

Q ss_pred             hCCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCC-chhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEEEE
Q 005257          363 TKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHEN-DGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVY  441 (705)
Q Consensus       363 t~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~-~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~lV~  441 (705)
                      .++|...+.||+|+||.||+|.+..+++.||+|++.... ....+.+.+|+.++++++||||+++++++.. ++..++||
T Consensus        32 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-~~~~~lv~  110 (360)
T 3eqc_A           32 DDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYS-DGEISICM  110 (360)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEE-TTEEEEEE
T ss_pred             cccceeeeeecCCCCeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEE-CCEEEEEE
Confidence            357888999999999999999999999999999997653 3445778999999999999999999998886 67899999


Q ss_pred             eeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCC-CeeecCCCCCCeEEccCCCeeeeeeccceecCC
Q 005257          442 DYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEK-KVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGH  520 (705)
Q Consensus       442 E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~-~iiHrDLkp~NILld~~~~~kL~DFGla~~~~~  520 (705)
                      ||+++++|.+++....   .+++..+..++.|++.||.|||+   . +|+||||||+|||++.++.+||+|||+++....
T Consensus       111 e~~~~~~L~~~l~~~~---~~~~~~~~~i~~~i~~~l~~lh~---~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~  184 (360)
T 3eqc_A          111 EHMDGGSLDQVLKKAG---RIPEQILGKVSIAVIKGLTYLRE---KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID  184 (360)
T ss_dssp             CCCTTCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHH---HHCCCCSCCSGGGEEECTTCCEEECCCCCCHHHHH
T ss_pred             ECCCCCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHH---hCCEEcCCccHHHEEECCCCCEEEEECCCCccccc
Confidence            9999999999997654   58999999999999999999998   5 899999999999999999999999999875432


Q ss_pred             CCcceeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHh--------------
Q 005257          521 GQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQ--------------  586 (705)
Q Consensus       521 ~~~~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~--------------  586 (705)
                      .   ......||+.|+|||++.+..++.++|||||||++|||++|+.||.................              
T Consensus       185 ~---~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  261 (360)
T 3eqc_A          185 S---MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPG  261 (360)
T ss_dssp             H---C----CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSCCCHHHHHHHHC------------------
T ss_pred             c---cccCCCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccCCCCCCCcccCC
Confidence            2   22335789999999999999999999999999999999999999986543222211110000              


Q ss_pred             -------------CchhHHHHHhhhcC--CCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 005257          587 -------------GKLLDALDARLRAK--GGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKV  635 (705)
Q Consensus       587 -------------~~~~~~id~~l~~~--~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  635 (705)
                                   ....+.++......  ..........+.+++..||+.||++|||+.|++++
T Consensus       262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h  325 (360)
T 3eqc_A          262 RPLNKFGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVH  325 (360)
T ss_dssp             ------------CCCHHHHHHHHHHSCCCCCCTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred             CcccccccCCCCcccchhhhhHHhccCCCCCCcccccHHHHHHHHHHhhcChhhCCCHHHHhhC
Confidence                         01111112111110  00111234568899999999999999999999884

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}

Probab=100.00  E-value=6.2e-40  Score=352.58  Aligned_cols=253  Identities=21%  Similarity=0.350  Sum_probs=198.1

Q ss_pred             hCCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCC--chhHHHHHHHHHHhccCCC--CCcceeeeeeeeccCceE
Q 005257          363 TKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHEN--DGGTRAFLAEISSLGRLKH--KSLVGLRGWCKREKGSLM  438 (705)
Q Consensus       363 t~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~--~~~~~~~~~Ei~~l~~l~H--pniv~l~g~~~~~~~~~~  438 (705)
                      .++|+..+.||+|+||.||++.+. +++.||||++....  ....+.+.+|+.++.+++|  |||+++++++.. +..++
T Consensus         8 ~~~y~i~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~-~~~~~   85 (343)
T 3dbq_A            8 GRIYSILKQIGSGGSSKVFQVLNE-KKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEIT-DQYIY   85 (343)
T ss_dssp             SCEEEEEEEESCCSSEEEEEEECT-TSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEEC-SSEEE
T ss_pred             cCEEEEEEEEecCCCeEEEEEEeC-CCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEee-CCEEE
Confidence            456889999999999999999985 57889999987543  3445778999999999986  999999999876 67899


Q ss_pred             EEEeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceec
Q 005257          439 LVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMH  518 (705)
Q Consensus       439 lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~  518 (705)
                      +||| +.+++|.+++....   .+++.++..++.|++.||.|||+   .+|+||||||+|||++ ++.+||+|||+++..
T Consensus        86 lv~e-~~~~~L~~~l~~~~---~~~~~~~~~i~~qi~~al~~lH~---~~iiHrDikp~NIll~-~~~~kl~DFG~a~~~  157 (343)
T 3dbq_A           86 MVME-CGNIDLNSWLKKKK---SIDPWERKSYWKNMLEAVHTIHQ---HGIVHSDLKPANFLIV-DGMLKLIDFGIANQM  157 (343)
T ss_dssp             EEEC-CCSEEHHHHHHHSC---CCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEEE-TTEEEECCCSSSCCC
T ss_pred             EEEe-CCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCcceEEEE-CCcEEEeeccccccc
Confidence            9999 55789999997643   68999999999999999999999   9999999999999997 578999999999876


Q ss_pred             CCCCcc-eeeeeeccccCCCcccccc-----------CCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHh
Q 005257          519 GHGQVA-STTRVVGTVGYLAPEVFSS-----------GRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQ  586 (705)
Q Consensus       519 ~~~~~~-~~~~~~gt~~y~APE~~~~-----------~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~  586 (705)
                      ...... ......||+.|+|||++.+           ..++.++|||||||++|||++|+.||....... ....     
T Consensus       158 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~-~~~~-----  231 (343)
T 3dbq_A          158 QPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQI-SKLH-----  231 (343)
T ss_dssp             ------------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCCSHH-HHHH-----
T ss_pred             CcccccccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhhhHH-HHHH-----
Confidence            543322 2334679999999999864           678999999999999999999999997643321 1111     


Q ss_pred             CchhHHHHHhhhcCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHH
Q 005257          587 GKLLDALDARLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLE  637 (705)
Q Consensus       587 ~~~~~~id~~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  637 (705)
                          ..++....  ..++......+.+++..||+.||.+|||+.|++++..
T Consensus       232 ----~~~~~~~~--~~~~~~~~~~l~~li~~~L~~dp~~Rpt~~e~l~hp~  276 (343)
T 3dbq_A          232 ----AIIDPNHE--IEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPY  276 (343)
T ss_dssp             ----HHHCTTSC--CCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHH
T ss_pred             ----HHhcCCcc--cCCcccCCHHHHHHHHHHcCCChhHCCCHHHHHhCcc
Confidence                11111111  2222233456789999999999999999999998644

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...

Probab=100.00  E-value=5e-39  Score=334.94  Aligned_cols=251  Identities=23%  Similarity=0.343  Sum_probs=203.0

Q ss_pred             CCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCCc------hhHHHHHHHHHHhccCCCCCcceeeeeeeeccCce
Q 005257          364 KGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHEND------GGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSL  437 (705)
Q Consensus       364 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~------~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~  437 (705)
                      ++|...+.||+|+||.||+|.+..+++.||+|.+.....      ...+.+.+|+.++++++||||+++++++.. ....
T Consensus         5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~   83 (283)
T 3bhy_A            5 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFEN-KTDV   83 (283)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEEC-SSEE
T ss_pred             hhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecC-CCeE
Confidence            468889999999999999999998899999999875422      136789999999999999999999999876 6789


Q ss_pred             EEEEeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCC----Ceeeeeec
Q 005257          438 MLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEM----NGRLGDFG  513 (705)
Q Consensus       438 ~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~----~~kL~DFG  513 (705)
                      ++||||+++++|.+++....   .+++.++..++.|++.||.|||+   .+++||||||+||+++.++    .+||+|||
T Consensus        84 ~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~~~~~kl~dfg  157 (283)
T 3bhy_A           84 VLILELVSGGELFDFLAEKE---SLTEDEATQFLKQILDGVHYLHS---KRIAHFDLKPENIMLLDKNVPNPRIKLIDFG  157 (283)
T ss_dssp             EEEEECCCSCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEESCSSSSSCCEEECCCT
T ss_pred             EEEEeecCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHh---CCccCCCCChHHEEEecCCCCCCceEEEecc
Confidence            99999999999999997643   68999999999999999999998   9999999999999998877    79999999


Q ss_pred             cceecCCCCcceeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhHHH
Q 005257          514 LARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDAL  593 (705)
Q Consensus       514 la~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~~i  593 (705)
                      ++........  .....||+.|+|||++.+..++.++||||||+++|||++|+.||......   .....+......  .
T Consensus       158 ~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~---~~~~~~~~~~~~--~  230 (283)
T 3bhy_A          158 IAHKIEAGNE--FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQ---ETLTNISAVNYD--F  230 (283)
T ss_dssp             TCEECC----------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSSHH---HHHHHHHTTCCC--C
T ss_pred             cceeccCCCc--ccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCcchH---HHHHHhHhcccC--C
Confidence            9987654322  23357899999999999889999999999999999999999999765421   111122111110  0


Q ss_pred             HHhhhcCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHH
Q 005257          594 DARLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVK  634 (705)
Q Consensus       594 d~~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~  634 (705)
                      .....  .    .....+.+++..||+.||++||++.++++
T Consensus       231 ~~~~~--~----~~~~~~~~li~~~l~~dp~~Rps~~~~l~  265 (283)
T 3bhy_A          231 DEEYF--S----NTSELAKDFIRRLLVKDPKRRMTIAQSLE  265 (283)
T ss_dssp             CHHHH--T----TCCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred             cchhc--c----cCCHHHHHHHHHHccCCHhHCcCHHHHHh
Confidence            00000  1    12356889999999999999999999987

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A

Probab=100.00  E-value=1.2e-39  Score=343.86  Aligned_cols=252  Identities=26%  Similarity=0.375  Sum_probs=205.6

Q ss_pred             hCCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCCchhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEEEEe
Q 005257          363 TKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYD  442 (705)
Q Consensus       363 t~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~lV~E  442 (705)
                      .++|...+.||+|+||.||++.+..+++.||+|++........+.+.+|+.++++++||||+++++++.. .+..++|||
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~lv~e   86 (304)
T 2jam_A            8 RKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYES-TTHYYLVMQ   86 (304)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC------HHHHHHHHHHHCCCTTBCCEEEEEEC-SSEEEEEEC
T ss_pred             hccceeeeeccCCCCceEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHhCCCCCeeehhhhccc-CCEEEEEEE
Confidence            4568889999999999999999998999999999986655556678999999999999999999998876 678999999


Q ss_pred             eCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEE---ccCCCeeeeeeccceecC
Q 005257          443 YMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLL---DKEMNGRLGDFGLARMHG  519 (705)
Q Consensus       443 ~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILl---d~~~~~kL~DFGla~~~~  519 (705)
                      |+++++|.+++....   .+++.++..++.|++.||.|||+   .+|+||||||+||++   +.++.+||+|||+++...
T Consensus        87 ~~~~~~L~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~~  160 (304)
T 2jam_A           87 LVSGGELFDRILERG---VYTEKDASLVIQQVLSAVKYLHE---NGIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQ  160 (304)
T ss_dssp             CCCSCBHHHHHHHHS---CCCHHHHHHHHHHHHHHHHHHHH---TTCCCCSCCGGGCEESSSSTTCCEEBCSCSTTCCCC
T ss_pred             cCCCccHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHH---CCccccCCCHHHEEEecCCCCCCEEEccCCcceecC
Confidence            999999999987643   58999999999999999999998   999999999999999   788999999999997654


Q ss_pred             CCCcceeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhHHHHHhhhc
Q 005257          520 HGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRA  599 (705)
Q Consensus       520 ~~~~~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~l~~  599 (705)
                      ...   .....||+.|+|||++.+..++.++|||||||++|||++|+.||.....   ......+..+...        .
T Consensus       161 ~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~---~~~~~~i~~~~~~--------~  226 (304)
T 2jam_A          161 NGI---MSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETE---SKLFEKIKEGYYE--------F  226 (304)
T ss_dssp             CBT---THHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTSCH---HHHHHHHHHCCCC--------C
T ss_pred             CCc---cccccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCH---HHHHHHHHcCCCC--------C
Confidence            322   1234689999999999998999999999999999999999999976542   1122222222110        0


Q ss_pred             CCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 005257          600 KGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKV  635 (705)
Q Consensus       600 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  635 (705)
                      ...........+.+++..||+.||++||++.|++++
T Consensus       227 ~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h  262 (304)
T 2jam_A          227 ESPFWDDISESAKDFICHLLEKDPNERYTCEKALSH  262 (304)
T ss_dssp             CTTTTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred             CccccccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence            011112334678899999999999999999999874

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=3.6e-40  Score=356.34  Aligned_cols=254  Identities=22%  Similarity=0.313  Sum_probs=204.8

Q ss_pred             CCCCcceEEeecCceEEEEEEEc---CCCeEEEEEEeccCC----chhHHHHHHHHHHhccC-CCCCcceeeeeeeeccC
Q 005257          364 KGFSEENVIGVGGNGKVYKGVLE---GGGAEIAVKRISHEN----DGGTRAFLAEISSLGRL-KHKSLVGLRGWCKREKG  435 (705)
Q Consensus       364 ~~f~~~~~LG~G~fg~Vy~~~~~---~~~~~vavK~i~~~~----~~~~~~~~~Ei~~l~~l-~Hpniv~l~g~~~~~~~  435 (705)
                      ++|...+.||+|+||.||+|...   .+++.||||+++...    ....+.+.+|++++.++ +||||+++++++.. ..
T Consensus        54 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~-~~  132 (355)
T 1vzo_A           54 ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQT-ET  132 (355)
T ss_dssp             GGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEE-TT
T ss_pred             cceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEee-Cc
Confidence            57888999999999999999984   478999999986532    22345677899999999 69999999998876 67


Q ss_pred             ceEEEEeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccc
Q 005257          436 SLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLA  515 (705)
Q Consensus       436 ~~~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla  515 (705)
                      .+++||||+++|+|.+++....   .+++.++..++.||+.||.|||+   .+|+||||||+|||++.++.+||+|||++
T Consensus       133 ~~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~~~~~kl~DfG~a  206 (355)
T 1vzo_A          133 KLHLILDYINGGELFTHLSQRE---RFTEHEVQIYVGEIVLALEHLHK---LGIIYRDIKLENILLDSNGHVVLTDFGLS  206 (355)
T ss_dssp             EEEEEECCCCSCBHHHHHHHHS---CCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTSCEEESCSSEE
T ss_pred             eEEEEeecCCCCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEECCCCcEEEeeCCCC
Confidence            8999999999999999997643   58999999999999999999998   99999999999999999999999999999


Q ss_pred             eecCCCCcceeeeeeccccCCCcccccc--CCCCccccEEEEehhHHHHhhCCCCCCCCCcc-HHHHHHHHHHhCchhHH
Q 005257          516 RMHGHGQVASTTRVVGTVGYLAPEVFSS--GRASTQTDVFGFGILILEVLSGRRPIEEGKPN-LVEMVWELMVQGKLLDA  592 (705)
Q Consensus       516 ~~~~~~~~~~~~~~~gt~~y~APE~~~~--~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~-~~~~v~~~~~~~~~~~~  592 (705)
                      +..............||+.|+|||++.+  ..++.++|||||||++|||++|+.||...... ....+..          
T Consensus       207 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~~~~----------  276 (355)
T 1vzo_A          207 KEFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISR----------  276 (355)
T ss_dssp             EECCGGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCCHHHHHH----------
T ss_pred             eecccCCCCcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCccchHHHHHH----------
Confidence            8765443333444679999999999985  34789999999999999999999999754321 1111111          


Q ss_pred             HHHhhhcCCCCCHHHHHHHHHHHHHcCCCCCCCCC-----CHHHHHHHH
Q 005257          593 LDARLRAKGGFDEDEVERVLHLGLLCAYPDPRARP-----TMRQVVKVL  636 (705)
Q Consensus       593 id~~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP-----s~~evl~~L  636 (705)
                        ........++......+.+++..||+.||++||     ++.|++++.
T Consensus       277 --~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~~~~~~s~~ell~h~  323 (355)
T 1vzo_A          277 --RILKSEPPYPQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHL  323 (355)
T ss_dssp             --HHHHCCCCCCTTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTSG
T ss_pred             --HHhccCCCCCcccCHHHHHHHHHHhhhCHHHhcCCCCCCHHHHHcCc
Confidence              111111233444456788999999999999999     899888754

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*

Probab=100.00  E-value=3.6e-39  Score=345.40  Aligned_cols=274  Identities=26%  Similarity=0.394  Sum_probs=211.3

Q ss_pred             cCHHHHHHHhCCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCCchhHHHHHHHHHHhcc--CCCCCcceeeeeee
Q 005257          354 ITYQEIEAATKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGR--LKHKSLVGLRGWCK  431 (705)
Q Consensus       354 ~~~~el~~at~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~~~~~~~~~Ei~~l~~--l~Hpniv~l~g~~~  431 (705)
                      .+..--....++|...+.||+|+||.||+|.+.  ++.||||++..   ...+.+.+|.+++..  ++||||+++++++.
T Consensus        32 ~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~--~~~vavK~~~~---~~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~  106 (342)
T 1b6c_B           32 LPLLVQRTIARTIVLQESIGKGRFGEVWRGKWR--GEEVAVKIFSS---REERSWFREAEIYQTVMLRHENILGFIAADN  106 (342)
T ss_dssp             SCHHHHHHHHHHCEEEEEEEEETTEEEEEEEET--TEEEEEEEECG---GGHHHHHHHHHHHHHSCCCCTTBCCEEEEEE
T ss_pred             CceeecccccccEEEEeeecCCCCcEEEEEEEc--CccEEEEEeCc---hhHHHHHHHHHHHHHhhcCCCcEEEEEeeec
Confidence            334344455678999999999999999999984  78999999853   344677888888877  79999999999987


Q ss_pred             ecc---CceEEEEeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCC-----CCCeeecCCCCCCeEEcc
Q 005257          432 REK---GSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGW-----EKKVLHRDIKSSNVLLDK  503 (705)
Q Consensus       432 ~~~---~~~~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~-----~~~iiHrDLkp~NILld~  503 (705)
                      ...   ..+++||||+++|+|.+++.+.    .+++.+++.++.|++.||.|||...     ..+|+||||||+|||++.
T Consensus       107 ~~~~~~~~~~lv~e~~~~g~L~~~l~~~----~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~NIll~~  182 (342)
T 1b6c_B          107 KDNGTWTQLWLVSDYHEHGSLFDYLNRY----TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKK  182 (342)
T ss_dssp             CCCSSCCCEEEEECCCTTCBHHHHHHHC----CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCSGGGEEECT
T ss_pred             ccCCccceeEEEEeecCCCcHHHHHhcc----CccHHHHHHHHHHHHHHHHHHHHHHhhhcccCCeeeCCCCHHHEEECC
Confidence            643   2789999999999999999653    5899999999999999999999210     189999999999999999


Q ss_pred             CCCeeeeeeccceecCCCCcc---eeeeeeccccCCCccccccCC------CCccccEEEEehhHHHHhhC---------
Q 005257          504 EMNGRLGDFGLARMHGHGQVA---STTRVVGTVGYLAPEVFSSGR------ASTQTDVFGFGILILEVLSG---------  565 (705)
Q Consensus       504 ~~~~kL~DFGla~~~~~~~~~---~~~~~~gt~~y~APE~~~~~~------~s~ksDVwS~Gvvl~ElltG---------  565 (705)
                      ++.+||+|||+++........   ......||+.|+|||++.+..      ++.++|||||||++|||++|         
T Consensus       183 ~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~  262 (342)
T 1b6c_B          183 NGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHED  262 (342)
T ss_dssp             TSCEEECCCTTCEEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCC
T ss_pred             CCCEEEEECCCceeccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCcccc
Confidence            999999999999876554322   123357899999999997652      33689999999999999999         


Q ss_pred             -CCCCCCCCc--cHHHHHHHHHHhCchhHHHHHhhhcCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHhccc
Q 005257          566 -RRPIEEGKP--NLVEMVWELMVQGKLLDALDARLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLEGKIE  641 (705)
Q Consensus       566 -~~Pf~~~~~--~~~~~v~~~~~~~~~~~~id~~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~  641 (705)
                       +.||.....  ...+.....+........+..+     ....+....+.+++..||+.||++|||+.++++.|+...+
T Consensus       263 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~i~~  336 (342)
T 1b6c_B          263 YQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNR-----WQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQ  336 (342)
T ss_dssp             CCCTTTTTSCSSCCHHHHHHHHTTSCCCCCCCGG-----GGTSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             cccCccccCcCcccHHHHHHHHHHHHhCCCCccc-----ccchhHHHHHHHHHHHHhccChhhCCCHHHHHHHHHHHHH
Confidence             778865321  1112222222221111000000     0123567789999999999999999999999999997765

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C

Probab=100.00  E-value=1e-39  Score=358.61  Aligned_cols=254  Identities=21%  Similarity=0.271  Sum_probs=193.5

Q ss_pred             CCCCcc-eEEeecCceEEEEEEEcCCCeEEEEEEeccCCchhHHHHHHHHHHhcc-CCCCCcceeeeeeee---ccCceE
Q 005257          364 KGFSEE-NVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGR-LKHKSLVGLRGWCKR---EKGSLM  438 (705)
Q Consensus       364 ~~f~~~-~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~~~~~~~~~Ei~~l~~-l~Hpniv~l~g~~~~---~~~~~~  438 (705)
                      ++|... ++||+|+||+||+|.+..+++.||||+++.     ...+.+|+.++.+ .+||||+++++++..   +...++
T Consensus        61 ~~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~-----~~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~~~  135 (400)
T 1nxk_A           61 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD-----CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLL  135 (400)
T ss_dssp             GTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEC-----SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEE
T ss_pred             ccceeccceeeeccCeEEEEEEECCCCCEEEEEEeCc-----chhHHHHHHHHHHhcCCCCcceEeEEEeecccCCcEEE
Confidence            345554 689999999999999999999999999853     2456788888744 589999999998753   245689


Q ss_pred             EEEeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEcc---CCCeeeeeeccc
Q 005257          439 LVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDK---EMNGRLGDFGLA  515 (705)
Q Consensus       439 lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~---~~~~kL~DFGla  515 (705)
                      +||||+++|+|.+++..... ..+++.++..++.||+.||.|||+   .+|+||||||+|||++.   ++.+||+|||++
T Consensus       136 lv~E~~~gg~L~~~l~~~~~-~~l~~~~~~~i~~qi~~aL~~LH~---~~ivHrDlkp~Nill~~~~~~~~~kl~DFG~a  211 (400)
T 1nxk_A          136 IVMECLDGGELFSRIQDRGD-QAFTEREASEIMKSIGEAIQYLHS---INIAHRDVKPENLLYTSKRPNAILKLTDFGFA  211 (400)
T ss_dssp             EEEECCCSEEHHHHHHCC----CCBHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEESSSSTTCCEEECCCTTC
T ss_pred             EEEEeCCCCcHHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHH---CCccccCcCcceEEEecCCCCccEEEEecccc
Confidence            99999999999999976432 369999999999999999999998   99999999999999997   788999999999


Q ss_pred             eecCCCCcceeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhhCCCCCCCCCccH-HHHHHHHHHhCchhHHHH
Q 005257          516 RMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNL-VEMVWELMVQGKLLDALD  594 (705)
Q Consensus       516 ~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~-~~~v~~~~~~~~~~~~id  594 (705)
                      +......  .....+||+.|+|||++.+..++.++|||||||++|||++|+.||....... .......+..+...    
T Consensus       212 ~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~i~~~~~~----  285 (400)
T 1nxk_A          212 KETTSHN--SLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYE----  285 (400)
T ss_dssp             EECC-------------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSCCSHHHHHHHTCCC----
T ss_pred             cccCCCC--ccccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCccccccHHHHHHHHcCccc----
Confidence            8764332  2234688999999999999999999999999999999999999997643210 00011111111110    


Q ss_pred             HhhhcCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Q 005257          595 ARLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVL  636 (705)
Q Consensus       595 ~~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L  636 (705)
                          ............+.+++..||+.||++|||+.|++++-
T Consensus       286 ----~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~eil~hp  323 (400)
T 1nxk_A          286 ----FPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHP  323 (400)
T ss_dssp             ----CCTTTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSH
T ss_pred             ----CCCcccccCCHHHHHHHHHHCCCChhHCcCHHHHhcCc
Confidence                00000112345688999999999999999999999853

>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}

Probab=100.00  E-value=3.2e-40  Score=355.96  Aligned_cols=262  Identities=15%  Similarity=0.184  Sum_probs=205.5

Q ss_pred             hCCCCcceEEeecCceEEEEEEEcC--------CCeEEEEEEeccCCchhHHHHHHHHHHhccCCCCCcce---------
Q 005257          363 TKGFSEENVIGVGGNGKVYKGVLEG--------GGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVG---------  425 (705)
Q Consensus       363 t~~f~~~~~LG~G~fg~Vy~~~~~~--------~~~~vavK~i~~~~~~~~~~~~~Ei~~l~~l~Hpniv~---------  425 (705)
                      .++|...+.||+|+||.||+|.+..        .++.||||++...     +.+.+|++++++++||||++         
T Consensus        41 ~~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~-----~~~~~E~~~l~~l~h~niv~~~~~~~~~~  115 (352)
T 2jii_A           41 GRQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD-----GRLFNEQNFFQRAAKPLQVNKWKKLYSTP  115 (352)
T ss_dssp             SCEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT-----STHHHHHHHHHHHCCHHHHHHHHHHTTCT
T ss_pred             CCeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc-----chHHHHHHHHHHhcccchhhhhhhhccCC
Confidence            3678999999999999999999986        3789999998644     45789999999999999988         


Q ss_pred             ------eeeeeeeccCceEEEEeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCe
Q 005257          426 ------LRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNV  499 (705)
Q Consensus       426 ------l~g~~~~~~~~~~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NI  499 (705)
                            +++++...+...++||||+ +++|.+++..... ..+++.+++.++.||+.||.|||+   .+|+||||||+||
T Consensus       116 ~~~i~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~-~~l~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dikp~NI  190 (352)
T 2jii_A          116 LLAIPTCMGFGVHQDKYRFLVLPSL-GRSLQSALDVSPK-HVLSERSVLQVACRLLDALEFLHE---NEYVHGNVTAENI  190 (352)
T ss_dssp             TCSCCCCCEEEEETTTEEEEEEECC-CEEHHHHHHHSGG-GCCCHHHHHHHHHHHHHHHHHHHH---TTCBCSCCCGGGE
T ss_pred             ccCccchhhccccCCcEEEEEecCC-CcCHHHHHHhCCc-CCCCHHHHHHHHHHHHHHHHHHHh---CCccCCCCCHHHE
Confidence                  5666666567889999999 9999999986522 369999999999999999999999   9999999999999


Q ss_pred             EEccCC--CeeeeeeccceecCCCCcc------eeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhhCCCCCCC
Q 005257          500 LLDKEM--NGRLGDFGLARMHGHGQVA------STTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEE  571 (705)
Q Consensus       500 Lld~~~--~~kL~DFGla~~~~~~~~~------~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~  571 (705)
                      |++.++  .+||+|||+++........      ......||+.|+|||++.+..++.++|||||||++|||++|+.||..
T Consensus       191 l~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~  270 (352)
T 2jii_A          191 FVDPEDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLYGFLPWTN  270 (352)
T ss_dssp             EEETTEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGG
T ss_pred             EEcCCCCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCccc
Confidence            999998  8999999999866432211      11234789999999999998999999999999999999999999986


Q ss_pred             CCccHHHHHHHHHHhCchhHHHHHhhhc-CCC--CCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHhccc
Q 005257          572 GKPNLVEMVWELMVQGKLLDALDARLRA-KGG--FDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLEGKIE  641 (705)
Q Consensus       572 ~~~~~~~~v~~~~~~~~~~~~id~~l~~-~~~--~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~  641 (705)
                      ....... +.....      .+...... ...  ........+.+++..||+.||++||++.++++.|+...+
T Consensus       271 ~~~~~~~-~~~~~~------~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~  336 (352)
T 2jii_A          271 CLPNTED-IMKQKQ------KFVDKPGPFVGPCGHWIRPSETLQKYLKVVMALTYEEKPPYAMLRNNLEALLQ  336 (352)
T ss_dssp             GTTCHHH-HHHHHH------HHHHSCCCEECTTSCEECCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHH
T ss_pred             CCcCHHH-HHHHHH------hccCChhhhhhhccccCCCcHHHHHHHHHHHhCChhhCCCHHHHHHHHHHHHH
Confidence            5322111 111100      00000000 000  000123568899999999999999999999999998765

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B

Probab=100.00  E-value=1.5e-39  Score=368.64  Aligned_cols=250  Identities=24%  Similarity=0.360  Sum_probs=206.5

Q ss_pred             hCCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCC---chhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEE
Q 005257          363 TKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHEN---DGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLML  439 (705)
Q Consensus       363 t~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~---~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~l  439 (705)
                      .++|...+.||+|+||.||+|.++.+++.||||++....   ....+.+.+|++++++++||||+++++++.. ...+++
T Consensus       184 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~-~~~l~l  262 (543)
T 3c4z_A          184 EDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFET-KTDLCL  262 (543)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEEC-SSEEEE
T ss_pred             hhheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEee-CCEEEE
Confidence            357888999999999999999999999999999996542   2345678999999999999999999998876 678999


Q ss_pred             EEeeCCCCChhHHHHhcCC-CCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceec
Q 005257          440 VYDYMENGSLDKWIFQCDG-SMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMH  518 (705)
Q Consensus       440 V~E~~~~gsL~~~L~~~~~-~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~  518 (705)
                      ||||+++|+|.+++..... ...+++..++.++.||+.||.|||+   ++|+||||||+|||++.++.+||+|||+++..
T Consensus       263 VmE~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~---~gIvHrDLKP~NILl~~~g~vkL~DFGla~~~  339 (543)
T 3c4z_A          263 VMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQ---RNIIYRDLKPENVLLDDDGNVRISDLGLAVEL  339 (543)
T ss_dssp             EECCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTSCEEECCCTTCEEC
T ss_pred             EEEeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHH---cCCcccCCChHHEEEeCCCCEEEeecceeeec
Confidence            9999999999999976432 3369999999999999999999999   99999999999999999999999999999876


Q ss_pred             CCCCcceeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhhCCCCCCCCCcc-HHHHHHHHHHhCchhHHHHHhh
Q 005257          519 GHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPN-LVEMVWELMVQGKLLDALDARL  597 (705)
Q Consensus       519 ~~~~~~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~-~~~~v~~~~~~~~~~~~id~~l  597 (705)
                      ..... .....+||+.|+|||++.+..++.++|||||||++|||++|+.||...... ....+...+..+          
T Consensus       340 ~~~~~-~~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~~~~~~~~~~~~i~~~----------  408 (543)
T 3c4z_A          340 KAGQT-KTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQ----------  408 (543)
T ss_dssp             CTTCC-CBCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTTCCCCHHHHHHHHHHC----------
T ss_pred             cCCCc-ccccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCCccchhHHHHHHHHhhc----------
Confidence            54432 223358999999999999989999999999999999999999999764321 111111211111          


Q ss_pred             hcCCCCCHHHHHHHHHHHHHcCCCCCCCCCCH
Q 005257          598 RAKGGFDEDEVERVLHLGLLCAYPDPRARPTM  629 (705)
Q Consensus       598 ~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~  629 (705)
                        ...++......+.+++..||+.||++||++
T Consensus       409 --~~~~p~~~s~~~~~li~~lL~~dP~~R~~~  438 (543)
T 3c4z_A          409 --AVTYPDKFSPASKDFCEALLQKDPEKRLGF  438 (543)
T ss_dssp             --CCCCCTTSCHHHHHHHHHHSCSSGGGSCCC
T ss_pred             --ccCCCcccCHHHHHHHHHhccCCHhHCCCC
Confidence              122333445678899999999999999975

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*

Probab=100.00  E-value=8.7e-40  Score=340.43  Aligned_cols=250  Identities=25%  Similarity=0.429  Sum_probs=206.4

Q ss_pred             hCCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCCchhHHHHHHHHHHhccCCCCCcceeeeeeee----------
Q 005257          363 TKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKR----------  432 (705)
Q Consensus       363 t~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~----------  432 (705)
                      .++|+..+.||+|+||.||+|.+..+++.||+|++....    +.+.+|++++++++||||+++++++..          
T Consensus        10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~   85 (284)
T 2a19_B           10 GMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN----EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSSK   85 (284)
T ss_dssp             HHHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS----GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC------
T ss_pred             ccccceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc----HHHHHHHHHHHhCCCCCEEEEeeeEeccccCcccccc
Confidence            356888999999999999999999889999999997543    356789999999999999999998753          


Q ss_pred             -----ccCceEEEEeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCe
Q 005257          433 -----EKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNG  507 (705)
Q Consensus       433 -----~~~~~~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~  507 (705)
                           ....+++||||+++|+|.+++..... ..+++..++.++.|++.||.|||+   .+|+||||||+|||++.++.+
T Consensus        86 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~  161 (284)
T 2a19_B           86 NSSRSKTKCLFIQMEFCDKGTLEQWIEKRRG-EKLDKVLALELFEQITKGVDYIHS---KKLINRDLKPSNIFLVDTKQV  161 (284)
T ss_dssp             ---CCEEEEEEEEECCCCSCBHHHHHHHGGG-SCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEEETTEE
T ss_pred             cccccCcceEEEEEeccCCCCHHHHHhhccC-CCCCHHHHHHHHHHHHHHHHHHHh---CCeeeccCCHHHEEEcCCCCE
Confidence                 13457999999999999999976432 268999999999999999999998   999999999999999999999


Q ss_pred             eeeeeccceecCCCCcceeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhC
Q 005257          508 RLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQG  587 (705)
Q Consensus       508 kL~DFGla~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~  587 (705)
                      ||+|||+++.......  .....||+.|+|||++.+..++.++|||||||++|||++|..|+...     .........+
T Consensus       162 kl~Dfg~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~-----~~~~~~~~~~  234 (284)
T 2a19_B          162 KIGDFGLVTSLKNDGK--RTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFET-----SKFFTDLRDG  234 (284)
T ss_dssp             EECCCTTCEESSCCSC--CCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHHHH-----HHHHHHHHTT
T ss_pred             EECcchhheecccccc--ccccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcchhH-----HHHHHHhhcc
Confidence            9999999987655432  22346899999999999889999999999999999999999886421     1111111111


Q ss_pred             chhHHHHHhhhcCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHhccc
Q 005257          588 KLLDALDARLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLEGKIE  641 (705)
Q Consensus       588 ~~~~~id~~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~  641 (705)
                      .              .+......+.+++..||+.||++|||+.|+++.|+....
T Consensus       235 ~--------------~~~~~~~~~~~li~~~l~~dp~~Rps~~e~l~~l~~~~~  274 (284)
T 2a19_B          235 I--------------ISDIFDKKEKTLLQKLLSKKPEDRPNTSEILRTLTVWKK  274 (284)
T ss_dssp             C--------------CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHTC
T ss_pred             c--------------ccccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhh
Confidence            1              122223457889999999999999999999999986654

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=2.6e-39  Score=351.27  Aligned_cols=259  Identities=22%  Similarity=0.319  Sum_probs=199.2

Q ss_pred             hCCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCC--chhHHHHHHHHHHhccCCCCCcceeeeeeeecc-----C
Q 005257          363 TKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHEN--DGGTRAFLAEISSLGRLKHKSLVGLRGWCKREK-----G  435 (705)
Q Consensus       363 t~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~--~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~-----~  435 (705)
                      .++|...+.||+|+||.||+|.+..+++.||||++....  ....+.+.+|+++++.++||||+++++++....     .
T Consensus        24 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~  103 (367)
T 1cm8_A           24 RAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFT  103 (367)
T ss_dssp             BSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCC
T ss_pred             cceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccCc
Confidence            467889999999999999999999999999999986542  334567899999999999999999999887532     3


Q ss_pred             ceEEEEeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccc
Q 005257          436 SLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLA  515 (705)
Q Consensus       436 ~~~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla  515 (705)
                      .+++||||+ +++|.+++...    .+++..+..++.|++.||.|||+   .+|+||||||+|||++.++.+||+|||++
T Consensus       104 ~~~lv~e~~-~~~L~~~~~~~----~l~~~~~~~~~~qi~~~L~~LH~---~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a  175 (367)
T 1cm8_A          104 DFYLVMPFM-GTDLGKLMKHE----KLGEDRIQFLVYQMLKGLRYIHA---AGIIHRDLKPGNLAVNEDCELKILDFGLA  175 (367)
T ss_dssp             CCEEEEECC-SEEHHHHHHHC----CCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECCCTTC
T ss_pred             eEEEEEecC-CCCHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHH---CCccccCcCHHHEEEcCCCCEEEEeeecc
Confidence            469999999 78999998752    58999999999999999999999   99999999999999999999999999999


Q ss_pred             eecCCCCcceeeeeeccccCCCcccccc-CCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHH-hCchhHHH
Q 005257          516 RMHGHGQVASTTRVVGTVGYLAPEVFSS-GRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMV-QGKLLDAL  593 (705)
Q Consensus       516 ~~~~~~~~~~~~~~~gt~~y~APE~~~~-~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~-~~~~~~~i  593 (705)
                      +.....    .+..+||+.|+|||++.+ ..++.++||||+||++|||++|+.||.....  .+.+..... .|......
T Consensus       176 ~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~--~~~l~~i~~~~g~~~~~~  249 (367)
T 1cm8_A          176 RQADSE----MTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDH--LDQLKEIMKVTGTPPAEF  249 (367)
T ss_dssp             EECCSS----CCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSH--HHHHHHHHHHHCCCCHHH
T ss_pred             cccccc----cCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCCH--HHHHHHHHHhcCCCCHHH
Confidence            876432    233578999999999877 6799999999999999999999999986542  122111111 12111111


Q ss_pred             HHh------------hhcCC-----CCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 005257          594 DAR------------LRAKG-----GFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKV  635 (705)
Q Consensus       594 d~~------------l~~~~-----~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  635 (705)
                      ...            +....     .........+.+++.+||+.||++|||+.|++++
T Consensus       250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~mL~~dP~~R~t~~e~l~h  308 (367)
T 1cm8_A          250 VQRLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAH  308 (367)
T ss_dssp             HHTCSCHHHHHHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred             HHHhhhHHHHHHHHhCCCCCCCCHHHHCCCCCHHHHHHHHHHccCChhHCCCHHHHhcC
Confidence            110            00000     0111224568899999999999999999999984

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*

Probab=100.00  E-value=1.7e-39  Score=338.35  Aligned_cols=247  Identities=25%  Similarity=0.355  Sum_probs=202.0

Q ss_pred             hCCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccC--CchhHHHHHHHHHHhccC-CCCCcceeeeeeeeccCceEE
Q 005257          363 TKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHE--NDGGTRAFLAEISSLGRL-KHKSLVGLRGWCKREKGSLML  439 (705)
Q Consensus       363 t~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~--~~~~~~~~~~Ei~~l~~l-~Hpniv~l~g~~~~~~~~~~l  439 (705)
                      .++|...+.||+|+||.||+|.+..+++.||||++...  .......+.+|+..+..+ +||||+++++++.. .+..++
T Consensus        10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~-~~~~~l   88 (289)
T 1x8b_A           10 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAE-DDHMLI   88 (289)
T ss_dssp             HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEE-TTEEEE
T ss_pred             cchhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeec-CCeEEE
Confidence            45688899999999999999999988999999998764  334567789999999999 99999999999876 678999


Q ss_pred             EEeeCCCCChhHHHHhcCC-CCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccC--------------
Q 005257          440 VYDYMENGSLDKWIFQCDG-SMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKE--------------  504 (705)
Q Consensus       440 V~E~~~~gsL~~~L~~~~~-~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~--------------  504 (705)
                      ||||+++++|.+++..... ...+++.+++.++.||+.||.|||+   ++|+||||||+|||++.+              
T Consensus        89 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~---~~ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~  165 (289)
T 1x8b_A           89 QNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHS---MSLVHMDIKPSNIFISRTSIPNAASEEGDEDD  165 (289)
T ss_dssp             EEECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEC----------------
T ss_pred             EEEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHh---CCEeecCCCHHHEEEcCCCCCccccccccccc
Confidence            9999999999999976421 1368999999999999999999999   999999999999999844              


Q ss_pred             -----CCeeeeeeccceecCCCCcceeeeeeccccCCCccccccC-CCCccccEEEEehhHHHHhhCCCCCCCCCccHHH
Q 005257          505 -----MNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSG-RASTQTDVFGFGILILEVLSGRRPIEEGKPNLVE  578 (705)
Q Consensus       505 -----~~~kL~DFGla~~~~~~~~~~~~~~~gt~~y~APE~~~~~-~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~  578 (705)
                           ..+||+|||++........     ..||+.|+|||++.+. .++.++|||||||++|||++|..|+....     
T Consensus       166 ~~~~~~~~kl~Dfg~~~~~~~~~~-----~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~-----  235 (289)
T 1x8b_A          166 WASNKVMFKIGDLGHVTRISSPQV-----EEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNGD-----  235 (289)
T ss_dssp             ----CCCEEECCCTTCEETTCSCC-----CCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCSSSH-----
T ss_pred             ccCCceEEEEcccccccccCCccc-----cCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCcchh-----
Confidence                 4799999999987654322     3589999999999765 56789999999999999999988765431     


Q ss_pred             HHHHHHHhCchhHHHHHhhhcCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 005257          579 MVWELMVQGKLLDALDARLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKV  635 (705)
Q Consensus       579 ~v~~~~~~~~~~~~id~~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  635 (705)
                       .+..+..+..           ...+......+.+++..||+.||++|||+.|++++
T Consensus       236 -~~~~~~~~~~-----------~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h  280 (289)
T 1x8b_A          236 -QWHEIRQGRL-----------PRIPQVLSQEFTELLKVMIHPDPERRPSAMALVKH  280 (289)
T ss_dssp             -HHHHHHTTCC-----------CCCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHTC
T ss_pred             -HHHHHHcCCC-----------CCCCcccCHHHHHHHHHHhCCCcccCCCHHHHhhC
Confidence             1222222221           12222334568899999999999999999999874

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A

Probab=100.00  E-value=2e-39  Score=358.44  Aligned_cols=250  Identities=25%  Similarity=0.391  Sum_probs=194.5

Q ss_pred             HhCCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCC--------chhHHHHHHHHHHhccCCCCCcceeeeeeeec
Q 005257          362 ATKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHEN--------DGGTRAFLAEISSLGRLKHKSLVGLRGWCKRE  433 (705)
Q Consensus       362 at~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~--------~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~  433 (705)
                      ..++|...+.||+|+||+||+|.+..+++.||||++....        ......+.+|+.+|++++||||+++++++.  
T Consensus       133 ~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~--  210 (419)
T 3i6u_A          133 LRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFD--  210 (419)
T ss_dssp             HHTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEE--
T ss_pred             hhccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEe--
Confidence            4568899999999999999999999999999999986532        112235789999999999999999999875  


Q ss_pred             cCceEEEEeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCC---Ceeee
Q 005257          434 KGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEM---NGRLG  510 (705)
Q Consensus       434 ~~~~~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~---~~kL~  510 (705)
                      ....++||||+++|+|.+++....   .+++.++..++.|++.||.|||+   .+|+||||||+|||++.++   .+||+
T Consensus       211 ~~~~~lv~e~~~~g~L~~~l~~~~---~~~~~~~~~i~~qi~~~l~~LH~---~~ivHrDlkp~NIll~~~~~~~~~kl~  284 (419)
T 3i6u_A          211 AEDYYIVLELMEGGELFDKVVGNK---RLKEATCKLYFYQMLLAVQYLHE---NGIIHRDLKPENVLLSSQEEDCLIKIT  284 (419)
T ss_dssp             SSEEEEEEECCTTCBGGGGTSSSC---CCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEESSSSSSCCEEEC
T ss_pred             cCceEEEEEcCCCCcHHHHHhccC---CCCHHHHHHHHHHHHHHHHHHHH---CCccccCCChHhEEEecCCCcceEEEe
Confidence            446899999999999999886432   69999999999999999999998   9999999999999997544   59999


Q ss_pred             eeccceecCCCCcceeeeeeccccCCCcccccc---CCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhC
Q 005257          511 DFGLARMHGHGQVASTTRVVGTVGYLAPEVFSS---GRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQG  587 (705)
Q Consensus       511 DFGla~~~~~~~~~~~~~~~gt~~y~APE~~~~---~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~  587 (705)
                      |||+++......  ......||+.|+|||++.+   ..++.++|||||||++|||++|+.||.......  .....+..+
T Consensus       285 DFG~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~--~~~~~i~~~  360 (419)
T 3i6u_A          285 DFGHSKILGETS--LMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQV--SLKDQITSG  360 (419)
T ss_dssp             CSSTTTSCC-------------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSSSC--CHHHHHHTT
T ss_pred             ecccceecCCCc--cccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcchH--HHHHHHhcC
Confidence            999998765432  2334689999999999853   568899999999999999999999997643210  011112222


Q ss_pred             chhHHHHHhhhcCCCCCHH----HHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 005257          588 KLLDALDARLRAKGGFDED----EVERVLHLGLLCAYPDPRARPTMRQVVKV  635 (705)
Q Consensus       588 ~~~~~id~~l~~~~~~~~~----~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  635 (705)
                      ..            .+.+.    ....+.+++..||+.||++||++.|++++
T Consensus       361 ~~------------~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~h  400 (419)
T 3i6u_A          361 KY------------NFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRH  400 (419)
T ss_dssp             CC------------CCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred             CC------------CCCchhhcccCHHHHHHHHHHccCChhHCcCHHHHhCC
Confidence            11            11111    23568899999999999999999999884

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A

Probab=100.00  E-value=4.3e-40  Score=358.54  Aligned_cols=244  Identities=15%  Similarity=0.142  Sum_probs=192.0

Q ss_pred             hCCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccC---CchhHHHHHHHH---HHhccCCCCCcceee-------ee
Q 005257          363 TKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHE---NDGGTRAFLAEI---SSLGRLKHKSLVGLR-------GW  429 (705)
Q Consensus       363 t~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~---~~~~~~~~~~Ei---~~l~~l~Hpniv~l~-------g~  429 (705)
                      .++|...+.||+|+||+||+|.+..+++.||||++...   .....+.+.+|+   +++++++||||++++       ++
T Consensus        72 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~  151 (377)
T 3byv_A           72 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDL  151 (377)
T ss_dssp             CEEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEE
T ss_pred             CceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhh
Confidence            46788899999999999999999888999999999743   334567899999   566666899999998       54


Q ss_pred             eeeccC----------------ceEEEEeeCCCCChhHHHHhcC----CCCcccHHHHHHHHHHHHHHHHHHhcCCCCCe
Q 005257          430 CKREKG----------------SLMLVYDYMENGSLDKWIFQCD----GSMMLSCEERIRVLKDVAAGVLYLHEGWEKKV  489 (705)
Q Consensus       430 ~~~~~~----------------~~~lV~E~~~~gsL~~~L~~~~----~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~i  489 (705)
                      +...+.                ..++||||+ +|+|.+++....    ....+++..++.++.||+.||.|||+   .+|
T Consensus       152 ~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~---~~i  227 (377)
T 3byv_A          152 VKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHH---YGL  227 (377)
T ss_dssp             EECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHH---TTE
T ss_pred             hhccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHh---CCe
Confidence            443211                378999999 689999997632    11245678999999999999999999   999


Q ss_pred             eecCCCCCCeEEccCCCeeeeeeccceecCCCCcceeeeeeccccCCCccccccC-----------CCCccccEEEEehh
Q 005257          490 LHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSG-----------RASTQTDVFGFGIL  558 (705)
Q Consensus       490 iHrDLkp~NILld~~~~~kL~DFGla~~~~~~~~~~~~~~~gt~~y~APE~~~~~-----------~~s~ksDVwS~Gvv  558 (705)
                      +||||||+|||++.++.+||+|||+++....    ......| +.|+|||++.+.           .++.++|||||||+
T Consensus       228 vHrDikp~NIll~~~~~~kL~DFG~a~~~~~----~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~i  302 (377)
T 3byv_A          228 VHTYLRPVDIVLDQRGGVFLTGFEHLVRDGA----RVVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLV  302 (377)
T ss_dssp             ECSCCCGGGEEECTTCCEEECCGGGCEETTC----EEECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHHH
T ss_pred             ecCCCCHHHEEEcCCCCEEEEechhheecCC----cccCCCC-cCccChhhhcccccccccccccccCChhhhHHHHHHH
Confidence            9999999999999999999999999986432    2344577 999999999877           89999999999999


Q ss_pred             HHHHhhCCCCCCCCCccHHHHHHHHHHhCchhHHHHHhhhcCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHH
Q 005257          559 ILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVK  634 (705)
Q Consensus       559 l~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~  634 (705)
                      +|||++|+.||......            .....   .......+    ...+.+++..||+.||++||++.|+++
T Consensus       303 l~elltg~~Pf~~~~~~------------~~~~~---~~~~~~~~----~~~~~~li~~~L~~dp~~Rpt~~e~l~  359 (377)
T 3byv_A          303 IYWIWCADLPITKDAAL------------GGSEW---IFRSCKNI----PQPVRALLEGFLRYPKEDRLLPLQAME  359 (377)
T ss_dssp             HHHHHHSSCCC------------------CCSGG---GGSSCCCC----CHHHHHHHHHHTCSSGGGCCCHHHHHT
T ss_pred             HHHHHHCCCCCcccccc------------cchhh---hhhhccCC----CHHHHHHHHHHcCCCchhCCCHHHHhh
Confidence            99999999999753310            00111   11111222    356788999999999999999999987

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*

Probab=100.00  E-value=1.1e-39  Score=348.27  Aligned_cols=265  Identities=23%  Similarity=0.343  Sum_probs=209.6

Q ss_pred             ccCHHHHHHHhCCCCcc-eEEeecCceEEEEEEEcCCCeEEEEEEeccCC--chhHHHHHHHHHHhccCC-CCCcceeee
Q 005257          353 RITYQEIEAATKGFSEE-NVIGVGGNGKVYKGVLEGGGAEIAVKRISHEN--DGGTRAFLAEISSLGRLK-HKSLVGLRG  428 (705)
Q Consensus       353 ~~~~~el~~at~~f~~~-~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~--~~~~~~~~~Ei~~l~~l~-Hpniv~l~g  428 (705)
                      .+.++..+...++|... +.||+|+||.||+|.+..+++.||||++....  ......+.+|+.++..++ ||||+++++
T Consensus        17 n~~~~~~~~~~~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~   96 (327)
T 3lm5_A           17 NLYFQSMENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHE   96 (327)
T ss_dssp             CCCSBCHHHHHHHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEE
T ss_pred             hhHHHHHHhhhhEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEE
Confidence            34455566666777777 88999999999999999999999999987542  334678999999999994 699999999


Q ss_pred             eeeeccCceEEEEeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEcc---CC
Q 005257          429 WCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDK---EM  505 (705)
Q Consensus       429 ~~~~~~~~~~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~---~~  505 (705)
                      ++.. .+..++||||+++|+|.+++..... ..+++.+++.++.|++.||.|||+   .+|+||||||+|||++.   ++
T Consensus        97 ~~~~-~~~~~lv~e~~~~~~L~~~~~~~~~-~~~~~~~~~~i~~ql~~~L~~LH~---~givH~Dikp~NIl~~~~~~~~  171 (327)
T 3lm5_A           97 VYEN-TSEIILILEYAAGGEIFSLCLPELA-EMVSENDVIRLIKQILEGVYYLHQ---NNIVHLDLKPQNILLSSIYPLG  171 (327)
T ss_dssp             EEEC-SSEEEEEEECCTTEEGGGGGSSCC--CCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEESCBTTBC
T ss_pred             EEEe-CCeEEEEEEecCCCcHHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHH---CCeecCcCChHHEEEecCCCCC
Confidence            9876 6789999999999999999865322 369999999999999999999998   99999999999999997   78


Q ss_pred             CeeeeeeccceecCCCCcceeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHH
Q 005257          506 NGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMV  585 (705)
Q Consensus       506 ~~kL~DFGla~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~  585 (705)
                      .+||+|||+++.......  .....||+.|+|||++.+..++.++|||||||++|||++|+.||......  +. ...+.
T Consensus       172 ~~kL~Dfg~a~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~--~~-~~~i~  246 (327)
T 3lm5_A          172 DIKIVDFGMSRKIGHACE--LREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQ--ET-YLNIS  246 (327)
T ss_dssp             CEEECCGGGCEEC-----------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--HH-HHHHH
T ss_pred             cEEEeeCccccccCCccc--cccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCch--HH-HHHHH
Confidence            999999999987654322  23457999999999999999999999999999999999999999765431  11 11111


Q ss_pred             hCchhHHHHHhhhcCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 005257          586 QGKLLDALDARLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKV  635 (705)
Q Consensus       586 ~~~~~~~id~~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  635 (705)
                      ...        ..............+.+++..||+.||++|||+.+++++
T Consensus       247 ~~~--------~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~ll~h  288 (327)
T 3lm5_A          247 QVN--------VDYSEETFSSVSQLATDFIQSLLVKNPEKRPTAEICLSH  288 (327)
T ss_dssp             HTC--------CCCCTTTTTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTC
T ss_pred             hcc--------cccCchhhcccCHHHHHHHHHHcCCChhhCcCHHHHhCC
Confidence            111        000011112334568899999999999999999999874

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}

Probab=100.00  E-value=1.7e-39  Score=352.13  Aligned_cols=263  Identities=16%  Similarity=0.131  Sum_probs=207.3

Q ss_pred             HHHHHhCCCCcceEEeecCceEEEEEE-----EcCCCeEEEEEEeccCCchhHHHHHHHHHHhccCC---CCCcceeeee
Q 005257          358 EIEAATKGFSEENVIGVGGNGKVYKGV-----LEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLK---HKSLVGLRGW  429 (705)
Q Consensus       358 el~~at~~f~~~~~LG~G~fg~Vy~~~-----~~~~~~~vavK~i~~~~~~~~~~~~~Ei~~l~~l~---Hpniv~l~g~  429 (705)
                      ++....++|...+.||+|+||+||+|.     ...+++.||||+++...   ..++..|++++.+++   |+||++++++
T Consensus        59 ~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~e~~~~~~l~~~~~~~iv~~~~~  135 (365)
T 3e7e_A           59 EFQLGSKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPAN---PWEFYIGTQLMERLKPSMQHMFMKFYSA  135 (365)
T ss_dssp             EEECSSSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSCC---HHHHHHHHHHHHHSCGGGGGGBCCEEEE
T ss_pred             eEEECCEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCCC---hhHHHHHHHHHHHhhhhhhhhhhhhhee
Confidence            444556789999999999999999994     55678899999996543   456677777777775   9999999999


Q ss_pred             eeeccCceEEEEeeCCCCChhHHHHhcC--CCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEcc----
Q 005257          430 CKREKGSLMLVYDYMENGSLDKWIFQCD--GSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDK----  503 (705)
Q Consensus       430 ~~~~~~~~~lV~E~~~~gsL~~~L~~~~--~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~----  503 (705)
                      +.. .+..++||||+++|+|.+++....  ....+++.+++.++.||+.||.|||+   .+|+||||||+|||++.    
T Consensus       136 ~~~-~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~---~~ivHrDiKp~NIll~~~~~~  211 (365)
T 3e7e_A          136 HLF-QNGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHD---CEIIHGDIKPDNFILGNGFLE  211 (365)
T ss_dssp             EEC-SSCEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHT---TTEECCCCSGGGEEECGGGTC
T ss_pred             eec-CCCcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhh---CCeecCCCCHHHEEecccccC
Confidence            876 678899999999999999997532  23369999999999999999999998   99999999999999998    


Q ss_pred             -------CCCeeeeeeccceecCCC-CcceeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhhCCCCCCCCCcc
Q 005257          504 -------EMNGRLGDFGLARMHGHG-QVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPN  575 (705)
Q Consensus       504 -------~~~~kL~DFGla~~~~~~-~~~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~  575 (705)
                             ++.+||+|||+++..... ........+||+.|||||++.+..++.++|||||||++|||++|+.||......
T Consensus       212 ~~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~  291 (365)
T 3e7e_A          212 QDDEDDLSAGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKNEGG  291 (365)
T ss_dssp             C------CTTEEECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCCCEEEETT
T ss_pred             ccccccccCCEEEeeCchhhhhhccCCCceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCCccccCCCC
Confidence                   899999999999865422 223334568999999999999989999999999999999999999998643210


Q ss_pred             HHHHHHHHHHhCchhHHHHHhhhcCCCCCHHHHHHHHHHHHHcCCCCCCCC-CCHHHHHHHHHhccccCCCC
Q 005257          576 LVEMVWELMVQGKLLDALDARLRAKGGFDEDEVERVLHLGLLCAYPDPRAR-PTMRQVVKVLEGKIEAGIEN  646 (705)
Q Consensus       576 ~~~~v~~~~~~~~~~~~id~~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~R-Ps~~evl~~L~~~~~~~~~~  646 (705)
                                  ..  .+...+.  ...   ..+.+.+++..|++.+|.+| |+++++.+.|+..++.....
T Consensus       292 ------------~~--~~~~~~~--~~~---~~~~~~~~~~~~l~~~p~~r~~~~~~l~~~l~~~l~~~~~~  344 (365)
T 3e7e_A          292 ------------EC--KPEGLFR--RLP---HLDMWNEFFHVMLNIPDCHHLPSLDLLRQKLKKVFQQHYTN  344 (365)
T ss_dssp             ------------EE--EECSCCT--TCS---SHHHHHHHHHHHHCCCCTTCCCCHHHHHHHHHHHHHHHTTT
T ss_pred             ------------ce--eechhcc--ccC---cHHHHHHHHHHHcCCCCCCcchHHHHHHHHHHHHHHHhhhh
Confidence                        00  0000111  111   23456678888999999999 78999999998887744443

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*

Probab=100.00  E-value=3.7e-39  Score=339.79  Aligned_cols=251  Identities=26%  Similarity=0.410  Sum_probs=209.4

Q ss_pred             hCCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCC-chhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEEEE
Q 005257          363 TKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHEN-DGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVY  441 (705)
Q Consensus       363 t~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~-~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~lV~  441 (705)
                      .+.|...+.||+|+||.||+|.+..+++.||||++.... ....+.+.+|+.+++.++||||+++++++.. ....++||
T Consensus        21 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~lv~   99 (303)
T 3a7i_A           21 EELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLK-DTKLWIIM   99 (303)
T ss_dssp             GGTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHCCCTTBCCEEEEEEE-TTEEEEEE
T ss_pred             HHHHHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEec-CCeEEEEE
Confidence            346888999999999999999999899999999997653 3456789999999999999999999999876 67899999


Q ss_pred             eeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecCCC
Q 005257          442 DYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHG  521 (705)
Q Consensus       442 E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~~~  521 (705)
                      ||+++++|.+++..    ..+++.++..++.|++.||.|||+   .+++||||||+||+++.++.+||+|||++......
T Consensus       100 e~~~~~~L~~~~~~----~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~  172 (303)
T 3a7i_A          100 EYLGGGSALDLLEP----GPLDETQIATILREILKGLDYLHS---EKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDT  172 (303)
T ss_dssp             ECCTTEEHHHHHTT----SCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCCTTCEECBTT
T ss_pred             EeCCCCcHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHH---CCCccCCCChheEEECCCCCEEEeecccceecCcc
Confidence            99999999999853    268999999999999999999999   99999999999999999999999999999876543


Q ss_pred             CcceeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhHHHHHhhhcCC
Q 005257          522 QVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRAKG  601 (705)
Q Consensus       522 ~~~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~l~~~~  601 (705)
                      ... .....||+.|+|||++.+..++.++|||||||++|||++|+.||......  . ....+..+.         .  .
T Consensus       173 ~~~-~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~--~-~~~~~~~~~---------~--~  237 (303)
T 3a7i_A          173 QIK-RNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPM--K-VLFLIPKNN---------P--P  237 (303)
T ss_dssp             BCC-BCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH--H-HHHHHHHSC---------C--C
T ss_pred             ccc-cCccCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCcCHH--H-HHHHhhcCC---------C--C
Confidence            322 23357899999999999989999999999999999999999999765421  1 111111111         0  1


Q ss_pred             CCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Q 005257          602 GFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVL  636 (705)
Q Consensus       602 ~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L  636 (705)
                      .........+.+++..||+.||++|||+.+++++.
T Consensus       238 ~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~~  272 (303)
T 3a7i_A          238 TLEGNYSKPLKEFVEACLNKEPSFRPTAKELLKHK  272 (303)
T ss_dssp             CCCSSCCHHHHHHHHHHCCSSGGGSCCHHHHTTCH
T ss_pred             CCccccCHHHHHHHHHHcCCChhhCcCHHHHhhCh
Confidence            12223345688999999999999999999998854

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*

Probab=100.00  E-value=1.2e-39  Score=348.39  Aligned_cols=263  Identities=24%  Similarity=0.341  Sum_probs=195.7

Q ss_pred             HhCCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCCc--hhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEE
Q 005257          362 ATKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHEND--GGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLML  439 (705)
Q Consensus       362 at~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~--~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~l  439 (705)
                      ..++|...+.||+|+||+||+|.+..+++.||||+++....  ...+.+.+|++++++++||||+++++++.. +..+++
T Consensus        32 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-~~~~~l  110 (329)
T 3gbz_A           32 SIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHH-NHRLHL  110 (329)
T ss_dssp             CGGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEE-TTEEEE
T ss_pred             chhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEec-CCEEEE
Confidence            44679999999999999999999999999999999975532  234567899999999999999999999876 678999


Q ss_pred             EEeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEc-----cCCCeeeeeecc
Q 005257          440 VYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLD-----KEMNGRLGDFGL  514 (705)
Q Consensus       440 V~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld-----~~~~~kL~DFGl  514 (705)
                      ||||++ |+|.+++....   .+++.++..++.||+.||.|||+   .+|+||||||+|||++     .++.+||+|||+
T Consensus       111 v~e~~~-~~L~~~~~~~~---~~~~~~~~~i~~ql~~~l~~LH~---~~ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~  183 (329)
T 3gbz_A          111 IFEYAE-NDLKKYMDKNP---DVSMRVIKSFLYQLINGVNFCHS---RRCLHRDLKPQNLLLSVSDASETPVLKIGDFGL  183 (329)
T ss_dssp             EEECCS-EEHHHHHHHCT---TCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEEEC-----CCEEEECCTTH
T ss_pred             EEecCC-CCHHHHHhhcC---CCCHHHHHHHHHHHHHHHHHHHh---CCEECCCCCHHHEEEecCCCCccceEEECcCCC
Confidence            999997 59999997654   58999999999999999999999   9999999999999994     455699999999


Q ss_pred             ceecCCCCcceeeeeeccccCCCccccccC-CCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHh-CchhHH
Q 005257          515 ARMHGHGQVASTTRVVGTVGYLAPEVFSSG-RASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQ-GKLLDA  592 (705)
Q Consensus       515 a~~~~~~~~~~~~~~~gt~~y~APE~~~~~-~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~-~~~~~~  592 (705)
                      ++....... ......||+.|+|||++.+. .++.++|||||||++|||++|+.||......  +........ +.....
T Consensus       184 a~~~~~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~--~~~~~~~~~~~~~~~~  260 (329)
T 3gbz_A          184 ARAFGIPIR-QFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEI--DQLFKIFEVLGLPDDT  260 (329)
T ss_dssp             HHHHC------------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHHHHHHHCCCCTT
T ss_pred             ccccCCccc-ccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCCHH--HHHHHHHHHhCCCchh
Confidence            987653322 22345789999999999774 4899999999999999999999999765431  222111111 000000


Q ss_pred             HHHhhhcCC----------CCC------HHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 005257          593 LDARLRAKG----------GFD------EDEVERVLHLGLLCAYPDPRARPTMRQVVKV  635 (705)
Q Consensus       593 id~~l~~~~----------~~~------~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  635 (705)
                      .-+......          ...      ......+.+++..||+.||++|||+.|++++
T Consensus       261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h  319 (329)
T 3gbz_A          261 TWPGVTALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALEH  319 (329)
T ss_dssp             TSTTGGGSTTCCTTCCCCCCCCHHHHHGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred             hhhhhhhhhhhhhhhhhhccccHhhhcccccCHHHHHHHHHHccCChhhCCCHHHHhCC
Confidence            000000000          000      0023567899999999999999999999873

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*

Probab=100.00  E-value=3e-39  Score=335.36  Aligned_cols=249  Identities=26%  Similarity=0.408  Sum_probs=198.8

Q ss_pred             hCCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCC---chhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEE
Q 005257          363 TKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHEN---DGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLML  439 (705)
Q Consensus       363 t~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~---~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~l  439 (705)
                      .++|...+.||+|+||.||+|.+..+++.||||++....   ....+.+.+|+.+++.++||||+++++++.. .+..++
T Consensus        10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~l   88 (276)
T 2h6d_A           10 IGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVIST-PTDFFM   88 (276)
T ss_dssp             ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEEC-SSEEEE
T ss_pred             eccEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEec-CCeEEE
Confidence            357888999999999999999999889999999986532   2345678999999999999999999998876 678999


Q ss_pred             EEeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecC
Q 005257          440 VYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHG  519 (705)
Q Consensus       440 V~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~  519 (705)
                      ||||+++++|.+++....   .+++.++..++.|++.||.|||+   .+++||||||+||+++.++.+||+|||++....
T Consensus        89 v~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~  162 (276)
T 2h6d_A           89 VMEYVSGGELFDYICKHG---RVEEMEARRLFQQILSAVDYCHR---HMVVHRDLKPENVLLDAHMNAKIADFGLSNMMS  162 (276)
T ss_dssp             EEECCCSCBHHHHHHHHC---SCCHHHHHHHHHHHHHHHHHHHH---HCSSCCCCCGGGEEECTTSCEEECCCCGGGCCC
T ss_pred             EEeccCCCcHHHHHhccC---CCCHHHHHHHHHHHHHHHHHHHH---CCCccCCCChhhEEECCCCCEEEeecccccccC
Confidence            999999999999997653   58999999999999999999998   999999999999999999999999999998765


Q ss_pred             CCCcceeeeeeccccCCCccccccCCC-CccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhHHHHHhhh
Q 005257          520 HGQVASTTRVVGTVGYLAPEVFSSGRA-STQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDARLR  598 (705)
Q Consensus       520 ~~~~~~~~~~~gt~~y~APE~~~~~~~-s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~l~  598 (705)
                      ....  .....||+.|+|||.+.+..+ +.++||||||+++|||++|+.||.....   ......+..+.          
T Consensus       163 ~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~---~~~~~~~~~~~----------  227 (276)
T 2h6d_A          163 DGEF--LRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHV---PTLFKKIRGGV----------  227 (276)
T ss_dssp             C---------------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCSSH---HHHHHHHHHCC----------
T ss_pred             CCcc--eecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCCcH---HHHHHHhhcCc----------
Confidence            4322  233578999999999987665 6899999999999999999999976432   11122222111          


Q ss_pred             cCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 005257          599 AKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKV  635 (705)
Q Consensus       599 ~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  635 (705)
                        ...+......+.+++..||+.||++|||+.+++++
T Consensus       228 --~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~~l~h  262 (276)
T 2h6d_A          228 --FYIPEYLNRSVATLLMHMLQVDPLKRATIKDIREH  262 (276)
T ss_dssp             --CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred             --ccCchhcCHHHHHHHHHHccCChhhCCCHHHHHhC
Confidence              11222234568899999999999999999999984

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}

Probab=100.00  E-value=9.3e-40  Score=349.32  Aligned_cols=269  Identities=23%  Similarity=0.338  Sum_probs=197.7

Q ss_pred             hCCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCCchhHHHHHH--HHHHhccCCCCCcceeeeeeee----ccCc
Q 005257          363 TKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLA--EISSLGRLKHKSLVGLRGWCKR----EKGS  436 (705)
Q Consensus       363 t~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~~~~~~~~~--Ei~~l~~l~Hpniv~l~g~~~~----~~~~  436 (705)
                      .++|...+.||+|+||.||+|..  +++.||||++....   .+.+..  |+..+..++||||+++++.+..    ....
T Consensus        12 ~~~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~---~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~   86 (336)
T 3g2f_A           12 LDNLKLLELIGRGRYGAVYKGSL--DERPVAVKVFSFAN---RQNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRME   86 (336)
T ss_dssp             TTSEEEEEEEEECSSEEEEEEEE--TTEEEEEEEEEGGG---HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCEE
T ss_pred             hHHhheeeecccCCCeEEEEEEE--CCeEEEEEEeeccc---hhhHHHHHHHHHHHhccCcchhhheecccccccCCCce
Confidence            46788899999999999999987  47899999986432   333444  4445666899999999975532    2335


Q ss_pred             eEEEEeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCC---------CeeecCCCCCCeEEccCCCe
Q 005257          437 LMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEK---------KVLHRDIKSSNVLLDKEMNG  507 (705)
Q Consensus       437 ~~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~---------~iiHrDLkp~NILld~~~~~  507 (705)
                      +++||||+++|+|.+++...    ..++..+..++.|++.||.|||+   .         +|+||||||+|||++.++.+
T Consensus        87 ~~lv~e~~~~g~L~~~l~~~----~~~~~~~~~i~~qi~~~L~~LH~---~~~~~~~~~~~ivH~Dikp~Nill~~~~~~  159 (336)
T 3g2f_A           87 YLLVMEYYPNGSLXKYLSLH----TSDWVSSCRLAHSVTRGLAYLHT---ELPRGDHYKPAISHRDLNSRNVLVKNDGTC  159 (336)
T ss_dssp             EEEEECCCTTCBHHHHHHHC----CBCHHHHHHHHHHHHHHHHHHHC---CBCCGGGCBCCEECSSCSGGGEEECTTSCE
T ss_pred             EEEEEecCCCCcHHHHHhhc----ccchhHHHHHHHHHHHHHHHHHh---hhccccccccceeecccccceEEEcCCCcE
Confidence            78999999999999999653    35899999999999999999998   6         99999999999999999999


Q ss_pred             eeeeeccceecCCCCc-------ceeeeeeccccCCCcccccc-------CCCCccccEEEEehhHHHHhhCCCCCCCCC
Q 005257          508 RLGDFGLARMHGHGQV-------ASTTRVVGTVGYLAPEVFSS-------GRASTQTDVFGFGILILEVLSGRRPIEEGK  573 (705)
Q Consensus       508 kL~DFGla~~~~~~~~-------~~~~~~~gt~~y~APE~~~~-------~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~  573 (705)
                      ||+|||+++.......       .......||+.|+|||++.+       ..++.++|||||||++|||++|..|+....
T Consensus       160 kL~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~  239 (336)
T 3g2f_A          160 VISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGE  239 (336)
T ss_dssp             EECCCTTCEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGSTTS
T ss_pred             EEeeccceeecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCCcc
Confidence            9999999987654321       11223468999999999976       356678999999999999999987765432


Q ss_pred             cc--HHHHHHHHHHhCchhHHHHHhh---hcCCC------CCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHhcccc
Q 005257          574 PN--LVEMVWELMVQGKLLDALDARL---RAKGG------FDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLEGKIEA  642 (705)
Q Consensus       574 ~~--~~~~v~~~~~~~~~~~~id~~l---~~~~~------~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~~  642 (705)
                      ..  ...............+.+....   .....      ........+.+++..||+.||++|||+.|+++.|+.++..
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~e~l~~L~~ll~~  319 (336)
T 3g2f_A          240 SVPEYQMAFQTEVGNHPTFEDMQVLVSREKQRPKFPEAWKENSLAVRSLKETIEDCWDQDAEARLTAQXAEERMAELMMI  319 (336)
T ss_dssp             CCCCCCCTTHHHHCSSCCHHHHHHHHTTSCCCCCCCTTCCCCSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred             chhHHHHhhhcccCCCchHHHHHhhhcccccCCCCCcccccccchHHHHHHHHHHHhcCChhhCcchHHHHHHHHHHHHH
Confidence            10  0000000000000111111000   00011      1224566799999999999999999999999999988763


Q ss_pred             C
Q 005257          643 G  643 (705)
Q Consensus       643 ~  643 (705)
                      .
T Consensus       320 ~  320 (336)
T 3g2f_A          320 W  320 (336)
T ss_dssp             C
T ss_pred             H
Confidence            3

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}

Probab=100.00  E-value=7.6e-39  Score=337.28  Aligned_cols=253  Identities=20%  Similarity=0.274  Sum_probs=204.0

Q ss_pred             hCCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCC----chhHHHHHHHHHHhccCCCCCcceeeeeeee-ccCce
Q 005257          363 TKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHEN----DGGTRAFLAEISSLGRLKHKSLVGLRGWCKR-EKGSL  437 (705)
Q Consensus       363 t~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~----~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~-~~~~~  437 (705)
                      .++|...+.||+|+||.||++.+..+++.||+|++....    ....+.+.+|++++++++||||+++++++.. +....
T Consensus         4 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~   83 (305)
T 2wtk_C            4 IGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKM   83 (305)
T ss_dssp             -CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---CE
T ss_pred             ccceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCeE
Confidence            468999999999999999999999899999999986542    3345789999999999999999999998853 34578


Q ss_pred             EEEEeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeecccee
Q 005257          438 MLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARM  517 (705)
Q Consensus       438 ~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~  517 (705)
                      ++||||++++ |.+++..... ..+++.++..++.|++.||.|||+   .+|+||||||+|||++.++.+||+|||++..
T Consensus        84 ~lv~e~~~~~-l~~~~~~~~~-~~~~~~~~~~~~~qi~~al~~LH~---~~i~H~dlkp~NIl~~~~~~~kl~dfg~~~~  158 (305)
T 2wtk_C           84 YMVMEYCVCG-MQEMLDSVPE-KRFPVCQAHGYFCQLIDGLEYLHS---QGIVHKDIKPGNLLLTTGGTLKISALGVAEA  158 (305)
T ss_dssp             EEEEECCSEE-HHHHHHHSTT-CSCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTCCEEECCCTTCEE
T ss_pred             EEEehhccCC-HHHHHHhCcc-cccCHHHHHHHHHHHHHHHHHHHH---CCeeecCCCcccEEEcCCCcEEeeccccccc
Confidence            9999999876 7777766443 369999999999999999999999   9999999999999999999999999999987


Q ss_pred             cCCCC-cceeeeeeccccCCCccccccCC--CCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhHHHH
Q 005257          518 HGHGQ-VASTTRVVGTVGYLAPEVFSSGR--ASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALD  594 (705)
Q Consensus       518 ~~~~~-~~~~~~~~gt~~y~APE~~~~~~--~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~~id  594 (705)
                      ..... ........||+.|+|||++.+..  ++.++|||||||++|||++|+.||.....   ......+..+.      
T Consensus       159 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~---~~~~~~i~~~~------  229 (305)
T 2wtk_C          159 LHPFAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNI---YKLFENIGKGS------  229 (305)
T ss_dssp             CCTTCSSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSSH---HHHHHHHHHCC------
T ss_pred             cCccccccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCchH---HHHHHHHhcCC------
Confidence            65322 22233457899999999987644  37899999999999999999999986432   11122222221      


Q ss_pred             HhhhcCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 005257          595 ARLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKV  635 (705)
Q Consensus       595 ~~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  635 (705)
                            ...+......+.+++.+||+.||++|||+.|++++
T Consensus       230 ------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~  264 (305)
T 2wtk_C          230 ------YAIPGDCGPPLSDLLKGMLEYEPAKRFSIRQIRQH  264 (305)
T ss_dssp             ------CCCCSSSCHHHHHHHHHHTCSSTTTSCCHHHHHHS
T ss_pred             ------CCCCCccCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence                  12223344568899999999999999999999974

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*

Probab=100.00  E-value=1.4e-39  Score=347.11  Aligned_cols=262  Identities=24%  Similarity=0.392  Sum_probs=205.8

Q ss_pred             HhCCCCcceEEeecCceEEEEEE-----EcCCCeEEEEEEeccC-CchhHHHHHHHHHHhccCCCCCcceeeeeeeeccC
Q 005257          362 ATKGFSEENVIGVGGNGKVYKGV-----LEGGGAEIAVKRISHE-NDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKG  435 (705)
Q Consensus       362 at~~f~~~~~LG~G~fg~Vy~~~-----~~~~~~~vavK~i~~~-~~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~  435 (705)
                      ..++|...+.||+|+||.||+|.     ...++..||||++... .......+.+|+.++++++||||+++++++.. ..
T Consensus        28 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-~~  106 (327)
T 2yfx_A           28 PRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQ-SL  106 (327)
T ss_dssp             CGGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS-SS
T ss_pred             ChhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhCCCCCCCeEEEEEcC-CC
Confidence            34678999999999999999999     4456788999999754 33456679999999999999999999999876 66


Q ss_pred             ceEEEEeeCCCCChhHHHHhcCCC----CcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEcc---CCCee
Q 005257          436 SLMLVYDYMENGSLDKWIFQCDGS----MMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDK---EMNGR  508 (705)
Q Consensus       436 ~~~lV~E~~~~gsL~~~L~~~~~~----~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~---~~~~k  508 (705)
                      ..++||||+++|+|.+++......    ..+++.+++.++.|++.||.|||+   .+|+||||||+|||++.   +..+|
T Consensus       107 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~---~~i~H~dlkp~NIli~~~~~~~~~k  183 (327)
T 2yfx_A          107 PRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEE---NHFIHRDIAARNCLLTCPGPGRVAK  183 (327)
T ss_dssp             SCEEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEESCSSTTCCEE
T ss_pred             CcEEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhh---CCeecCcCCHhHEEEecCCCcceEE
Confidence            789999999999999999875321    358999999999999999999998   99999999999999984   44699


Q ss_pred             eeeeccceecCCCCc-ceeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhh-CCCCCCCCCccHHHHHHHHHHh
Q 005257          509 LGDFGLARMHGHGQV-ASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLS-GRRPIEEGKPNLVEMVWELMVQ  586 (705)
Q Consensus       509 L~DFGla~~~~~~~~-~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~Ellt-G~~Pf~~~~~~~~~~v~~~~~~  586 (705)
                      |+|||+++....... .......||+.|+|||++.+..++.++|||||||++|||++ |+.||......   .+...+..
T Consensus       184 l~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~---~~~~~~~~  260 (327)
T 2yfx_A          184 IGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQ---EVLEFVTS  260 (327)
T ss_dssp             ECCCHHHHHHHC------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHH---HHHHHHHT
T ss_pred             ECccccccccccccccccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCcCHH---HHHHHHhc
Confidence            999999975543221 12223467889999999988899999999999999999998 99999765421   12222222


Q ss_pred             CchhHHHHHhhhcCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHhccc
Q 005257          587 GKLLDALDARLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLEGKIE  641 (705)
Q Consensus       587 ~~~~~~id~~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~  641 (705)
                      +..           ...+......+.+++..||+.||.+||++.++++.|+....
T Consensus       261 ~~~-----------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~~~~  304 (327)
T 2yfx_A          261 GGR-----------MDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQ  304 (327)
T ss_dssp             TCC-----------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             CCC-----------CCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHhc
Confidence            211           11223344678899999999999999999999999986544

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...

Probab=100.00  E-value=2.8e-39  Score=335.40  Aligned_cols=254  Identities=25%  Similarity=0.322  Sum_probs=205.4

Q ss_pred             hCCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCC-chhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEEEE
Q 005257          363 TKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHEN-DGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVY  441 (705)
Q Consensus       363 t~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~-~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~lV~  441 (705)
                      .++|+..+.||+|+||.||+|.+..+++.||||++.... ....+.+.+|+.+++.++||||+++++++.. .+..++||
T Consensus         6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~lv~   84 (276)
T 2yex_A            6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRRE-GNIQYLFL   84 (276)
T ss_dssp             HHHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTCCCTTBCCEEEEEEE-TTEEEEEE
T ss_pred             ecceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHhcCCCCceeeeeEEEc-CCEEEEEE
Confidence            356888999999999999999999889999999986543 3445788999999999999999999998876 67889999


Q ss_pred             eeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecCCC
Q 005257          442 DYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHG  521 (705)
Q Consensus       442 E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~~~  521 (705)
                      ||+++++|.+++...   ..+++.++..++.|++.||.|||+   .+++||||||+||+++.++.+||+|||++......
T Consensus        85 e~~~~~~L~~~l~~~---~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~  158 (276)
T 2yex_A           85 EYCSGGELFDRIEPD---IGMPEPDAQRFFHQLMAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYN  158 (276)
T ss_dssp             ECCTTEEGGGGSBTT---TBCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTCCEEECCCTTCEECEET
T ss_pred             EecCCCcHHHHHhhc---cCCCHHHHHHHHHHHHHHHHHHHh---CCeeccCCChHHEEEccCCCEEEeeCCCccccCCC
Confidence            999999999998543   268999999999999999999998   99999999999999999999999999999865432


Q ss_pred             Cc-ceeeeeeccccCCCccccccCCC-CccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhHHHHHhhhc
Q 005257          522 QV-ASTTRVVGTVGYLAPEVFSSGRA-STQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRA  599 (705)
Q Consensus       522 ~~-~~~~~~~gt~~y~APE~~~~~~~-s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~l~~  599 (705)
                      .. .......||+.|+|||++.+..+ +.++|||||||++|||++|+.||.........  ...+......         
T Consensus       159 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~--~~~~~~~~~~---------  227 (276)
T 2yex_A          159 NRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQE--YSDWKEKKTY---------  227 (276)
T ss_dssp             TEECCBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTSHH--HHHHHTTCTT---------
T ss_pred             cchhcccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchHHHH--HHHhhhcccc---------
Confidence            21 12234578999999999987664 78999999999999999999999765432111  1111111100         


Q ss_pred             CCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 005257          600 KGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKV  635 (705)
Q Consensus       600 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  635 (705)
                       ..........+.+++..||+.||++|||+.|++++
T Consensus       228 -~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~  262 (276)
T 2yex_A          228 -LNPWKKIDSAPLALLHKILVENPSARITIPDIKKD  262 (276)
T ss_dssp             -STTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred             -cCchhhcCHHHHHHHHHHCCCCchhCCCHHHHhcC
Confidence             00011233567889999999999999999998873

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*

Probab=100.00  E-value=5.8e-39  Score=356.17  Aligned_cols=200  Identities=25%  Similarity=0.383  Sum_probs=169.2

Q ss_pred             hCCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccC--CchhHHHHHHHHHHhccCCCCCcceeeeeeeecc----Cc
Q 005257          363 TKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHE--NDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREK----GS  436 (705)
Q Consensus       363 t~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~--~~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~----~~  436 (705)
                      .++|...+.||+|+||.||+|.+..+++.||||++...  .....+.+.+|+++|++++||||+++++++....    ..
T Consensus        25 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~  104 (432)
T 3n9x_A           25 PDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFDE  104 (432)
T ss_dssp             CTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCC
T ss_pred             cCCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCCe
Confidence            46789999999999999999999999999999999754  2344578899999999999999999999887533    57


Q ss_pred             eEEEEeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccce
Q 005257          437 LMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLAR  516 (705)
Q Consensus       437 ~~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~  516 (705)
                      +++||||++ |+|.+++...   ..+++..+..++.||+.||.|||+   .+|+||||||+|||++.++.+||+|||+++
T Consensus       105 ~~lv~e~~~-~~L~~~~~~~---~~l~~~~~~~i~~qil~aL~~LH~---~givHrDlkp~NILl~~~~~~kL~DFGla~  177 (432)
T 3n9x_A          105 LYIVLEIAD-SDLKKLFKTP---IFLTEEHIKTILYNLLLGENFIHE---SGIIHRDLKPANCLLNQDCSVKVCDFGLAR  177 (432)
T ss_dssp             EEEEEECCS-EEHHHHHHSS---CCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECCCTTCE
T ss_pred             EEEEEecCC-cCHHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHHH---CCCCCCCCCHHHeEECCCCCEEEccCCCcc
Confidence            899999996 5999999653   269999999999999999999999   999999999999999999999999999998


Q ss_pred             ecCCCCcc---------------------eeeeeeccccCCCcccc-ccCCCCccccEEEEehhHHHHhhCCCCC
Q 005257          517 MHGHGQVA---------------------STTRVVGTVGYLAPEVF-SSGRASTQTDVFGFGILILEVLSGRRPI  569 (705)
Q Consensus       517 ~~~~~~~~---------------------~~~~~~gt~~y~APE~~-~~~~~s~ksDVwS~Gvvl~ElltG~~Pf  569 (705)
                      ........                     ..+..+||+.|+|||++ ....++.++|||||||++|||++|..||
T Consensus       178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p~  252 (432)
T 3n9x_A          178 TINSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSH  252 (432)
T ss_dssp             EC-------------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTTT
T ss_pred             cccccccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhccccc
Confidence            76543211                     23456899999999986 5567999999999999999999854444

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*

Probab=100.00  E-value=1.7e-39  Score=355.64  Aligned_cols=251  Identities=21%  Similarity=0.354  Sum_probs=197.6

Q ss_pred             CCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCC--chhHHHHHHHHHHhccCC--CCCcceeeeeeeeccCceEE
Q 005257          364 KGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHEN--DGGTRAFLAEISSLGRLK--HKSLVGLRGWCKREKGSLML  439 (705)
Q Consensus       364 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~--~~~~~~~~~Ei~~l~~l~--Hpniv~l~g~~~~~~~~~~l  439 (705)
                      ++|...+.||+|+||.||+|.+.. ++.||||++....  ....+.+.+|+.++.+++  ||||+++++++.. .+.+++
T Consensus        56 ~~y~~~~~LG~G~fg~Vy~~~~~~-~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~-~~~~~l  133 (390)
T 2zmd_A           56 RIYSILKQIGSGGSSKVFQVLNEK-KQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEIT-DQYIYM  133 (390)
T ss_dssp             EEEEEEEEEECCSSEEEEEEECTT-CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEEC-SSEEEE
T ss_pred             CceEEEEEEccCCCeEEEEEEcCC-CCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEec-CCEEEE
Confidence            458899999999999999999875 8899999987543  345678999999999996  5999999998876 667999


Q ss_pred             EEeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecC
Q 005257          440 VYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHG  519 (705)
Q Consensus       440 V~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~  519 (705)
                      ||| +.+++|.+++....   .+++.++..++.||+.||.|||+   .+|+||||||+|||++ ++.+||+|||+++...
T Consensus       134 v~E-~~~~~L~~~l~~~~---~~~~~~~~~i~~qi~~aL~~lH~---~~ivHrDlkp~NIll~-~~~~kl~DFG~a~~~~  205 (390)
T 2zmd_A          134 VME-CGNIDLNSWLKKKK---SIDPWERKSYWKNMLEAVHTIHQ---HGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQ  205 (390)
T ss_dssp             EEE-CCSEEHHHHHHHCS---SCCHHHHHHHHHHHHHHHHHHHT---TTCCCCCCCGGGEEES-SSCEEECCCSSSCCC-
T ss_pred             EEe-cCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHH---CCeeecCCCHHHEEEE-CCeEEEEecCcccccc
Confidence            999 56889999997643   68999999999999999999998   9999999999999995 5789999999998765


Q ss_pred             CCCcc-eeeeeeccccCCCcccccc-----------CCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhC
Q 005257          520 HGQVA-STTRVVGTVGYLAPEVFSS-----------GRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQG  587 (705)
Q Consensus       520 ~~~~~-~~~~~~gt~~y~APE~~~~-----------~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~  587 (705)
                      ..... .....+||+.|+|||++.+           ..++.++|||||||++|||++|+.||....... ..+..     
T Consensus       206 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~-~~~~~-----  279 (390)
T 2zmd_A          206 PDTTSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQI-SKLHA-----  279 (390)
T ss_dssp             --------CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCCCHH-HHHHH-----
T ss_pred             CCCccccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhhHHH-HHHHH-----
Confidence            43322 2234579999999999865           368999999999999999999999997643321 11111     


Q ss_pred             chhHHHHHhhhcCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Q 005257          588 KLLDALDARLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVL  636 (705)
Q Consensus       588 ~~~~~id~~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L  636 (705)
                          .++....  ..++......+.+++..||+.||++||++.|++++-
T Consensus       280 ----~~~~~~~--~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~hp  322 (390)
T 2zmd_A          280 ----IIDPNHE--IEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHP  322 (390)
T ss_dssp             ----HHCTTSC--CCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSH
T ss_pred             ----HhCcccc--CCCCccchHHHHHHHHHHcccChhhCCCHHHHhhCc
Confidence                1111111  112222245678999999999999999999999854

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A

Probab=100.00  E-value=2.1e-38  Score=343.76  Aligned_cols=254  Identities=26%  Similarity=0.430  Sum_probs=207.4

Q ss_pred             HHHHHhCCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCCc--------hhHHHHHHHHHHhccC-CCCCcceeee
Q 005257          358 EIEAATKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHEND--------GGTRAFLAEISSLGRL-KHKSLVGLRG  428 (705)
Q Consensus       358 el~~at~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~--------~~~~~~~~Ei~~l~~l-~Hpniv~l~g  428 (705)
                      ......++|...+.||+|+||.||+|.+..+|+.||||++.....        ...+.+.+|+.++.++ +||||+++++
T Consensus        88 ~~~~~~~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~  167 (365)
T 2y7j_A           88 AAKEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLID  167 (365)
T ss_dssp             HHHHHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEE
T ss_pred             hhhhhhhhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEE
Confidence            344455679999999999999999999998899999999865431        1245678999999999 7999999999


Q ss_pred             eeeeccCceEEEEeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCee
Q 005257          429 WCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGR  508 (705)
Q Consensus       429 ~~~~~~~~~~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~k  508 (705)
                      ++.. ....++||||+++++|.+++....   .+++..+..++.||+.||.|||+   .+|+||||||+|||++.++.+|
T Consensus       168 ~~~~-~~~~~lv~e~~~g~~L~~~l~~~~---~l~~~~~~~i~~qi~~~L~~LH~---~gi~H~Dlkp~NIl~~~~~~ik  240 (365)
T 2y7j_A          168 SYES-SSFMFLVFDLMRKGELFDYLTEKV---ALSEKETRSIMRSLLEAVSFLHA---NNIVHRDLKPENILLDDNMQIR  240 (365)
T ss_dssp             EEEB-SSEEEEEECCCTTCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTCCEE
T ss_pred             EEee-CCEEEEEEEeCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEECCCCCEE
Confidence            8876 678999999999999999997643   68999999999999999999998   9999999999999999999999


Q ss_pred             eeeeccceecCCCCcceeeeeeccccCCCcccccc------CCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHH
Q 005257          509 LGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSS------GRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWE  582 (705)
Q Consensus       509 L~DFGla~~~~~~~~~~~~~~~gt~~y~APE~~~~------~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~  582 (705)
                      |+|||++........  .....||+.|+|||++.+      ..++.++|||||||++|||++|+.||......   ....
T Consensus       241 l~DfG~~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~---~~~~  315 (365)
T 2y7j_A          241 LSDFGFSCHLEPGEK--LRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQI---LMLR  315 (365)
T ss_dssp             ECCCTTCEECCTTCC--BCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHH---HHHH
T ss_pred             EEecCcccccCCCcc--cccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCCCHH---HHHH
Confidence            999999987654432  234579999999999863      35788999999999999999999999764321   1112


Q ss_pred             HHHhCchhHHHHHhhhcCCCCCH----HHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 005257          583 LMVQGKLLDALDARLRAKGGFDE----DEVERVLHLGLLCAYPDPRARPTMRQVVKV  635 (705)
Q Consensus       583 ~~~~~~~~~~id~~l~~~~~~~~----~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  635 (705)
                      .+..+..            .+..    .....+.+++..||+.||++|||+.+++++
T Consensus       316 ~i~~~~~------------~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~h  360 (365)
T 2y7j_A          316 MIMEGQY------------QFSSPEWDDRSSTVKDLISRLLQVDPEARLTAEQALQH  360 (365)
T ss_dssp             HHHHTCC------------CCCHHHHSSSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred             HHHhCCC------------CCCCcccccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence            2222211            1111    123458899999999999999999999874

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*

Probab=100.00  E-value=1.2e-39  Score=342.83  Aligned_cols=254  Identities=23%  Similarity=0.352  Sum_probs=202.1

Q ss_pred             hCCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCCchhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEEEEe
Q 005257          363 TKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYD  442 (705)
Q Consensus       363 t~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~lV~E  442 (705)
                      .++|+..+.||+|+||.||+|.+..+++.||+|++........+.+.+|++++..++||||+++++++.. .+..++|||
T Consensus        18 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~lv~e   96 (302)
T 2j7t_A           18 NEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYH-DGKLWIMIE   96 (302)
T ss_dssp             GGTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC----CCHHHHHHHHHHHHHCCCTTBCCEEEEEEC-C-CEEEEEE
T ss_pred             ccceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCCHHHHHHHHHHHHHHhcCCCCCEeeeeeeeee-CCeEEEEEE
Confidence            4678899999999999999999998899999999987766677889999999999999999999999876 668999999


Q ss_pred             eCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecCCCC
Q 005257          443 YMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQ  522 (705)
Q Consensus       443 ~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~~~~  522 (705)
                      |+++++|.+++.....  .+++.++..++.|++.||.|||+   .+++||||||+||+++.++.+||+|||++.......
T Consensus        97 ~~~~~~l~~~~~~~~~--~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~  171 (302)
T 2j7t_A           97 FCPGGAVDAIMLELDR--GLTEPQIQVVCRQMLEALNFLHS---KRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTL  171 (302)
T ss_dssp             CCTTEEHHHHHHHHTS--CCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCSGGGEEECTTSCEEECCCHHHHHHHHHH
T ss_pred             eCCCCcHHHHHHhhcc--CCCHHHHHHHHHHHHHHHHHHhc---CCcccCCCCHHHEEECCCCCEEEEECCCCccccccc
Confidence            9999999999876433  58999999999999999999998   999999999999999999999999999975432111


Q ss_pred             cceeeeeeccccCCCcccc-----ccCCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhHHHHHhh
Q 005257          523 VASTTRVVGTVGYLAPEVF-----SSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDARL  597 (705)
Q Consensus       523 ~~~~~~~~gt~~y~APE~~-----~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~l  597 (705)
                       .......||+.|+|||++     ....++.++|||||||++|||++|+.||......  +.... ...+....      
T Consensus       172 -~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~--~~~~~-~~~~~~~~------  241 (302)
T 2j7t_A          172 -QKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPM--RVLLK-IAKSDPPT------  241 (302)
T ss_dssp             -HC-----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSCHH--HHHHH-HHHSCCCC------
T ss_pred             -cccccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCCHH--HHHHH-HhccCCcc------
Confidence             112235789999999998     3567899999999999999999999999765431  11111 11111000      


Q ss_pred             hcCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 005257          598 RAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKV  635 (705)
Q Consensus       598 ~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  635 (705)
                         ...+......+.+++..||+.||++|||+.+++++
T Consensus       242 ---~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h  276 (302)
T 2j7t_A          242 ---LLTPSKWSVEFRDFLKIALDKNPETRPSAAQLLEH  276 (302)
T ss_dssp             ---CSSGGGSCHHHHHHHHHHSCSCTTTSCCHHHHTTS
T ss_pred             ---cCCccccCHHHHHHHHHHcccChhhCCCHHHHhcC
Confidence               01122234568899999999999999999999874

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*

Probab=100.00  E-value=9.8e-39  Score=348.80  Aligned_cols=263  Identities=21%  Similarity=0.258  Sum_probs=206.7

Q ss_pred             hCCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCCchhHHHHHHHHHHhccCC--------CCCcceeeeeeee--
Q 005257          363 TKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLK--------HKSLVGLRGWCKR--  432 (705)
Q Consensus       363 t~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~~~~~~~~~Ei~~l~~l~--------Hpniv~l~g~~~~--  432 (705)
                      .++|...++||+|+||+||+|.+..+++.||||++... ....+.+.+|+++++.++        |+||+++++++..  
T Consensus        36 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~~  114 (397)
T 1wak_A           36 NGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSA-EHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISG  114 (397)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEEE
T ss_pred             CCeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecC-CcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceeecC
Confidence            46899999999999999999999999999999998643 345677899999999996        7889999998863  


Q ss_pred             -ccCceEEEEeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCC-CeeecCCCCCCeEEccCC-----
Q 005257          433 -EKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEK-KVLHRDIKSSNVLLDKEM-----  505 (705)
Q Consensus       433 -~~~~~~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~-~iiHrDLkp~NILld~~~-----  505 (705)
                       ....+++||||+ +++|.+++..... ..+++.+++.++.||+.||.|||+   + +|+||||||+|||++.++     
T Consensus       115 ~~~~~~~lv~e~~-~~~l~~~~~~~~~-~~~~~~~~~~i~~qi~~aL~~lH~---~~givHrDikp~NIll~~~~~~~~~  189 (397)
T 1wak_A          115 VNGTHICMVFEVL-GHHLLKWIIKSNY-QGLPLPCVKKIIQQVLQGLDYLHT---KCRIIHTDIKPENILLSVNEQYIRR  189 (397)
T ss_dssp             TTEEEEEEEECCC-CCBHHHHHHHTTT-SCCCHHHHHHHHHHHHHHHHHHHH---TTCEECCCCSGGGEEECCCHHHHHH
T ss_pred             CCCceEEEEEecc-CccHHHHHHhccc-CCCCHHHHHHHHHHHHHHHHHHHH---hCCEecCCCCHHHeeEeccchhhhh
Confidence             245789999999 5677776665432 269999999999999999999998   7 999999999999999775     


Q ss_pred             --------------------------------------------CeeeeeeccceecCCCCcceeeeeeccccCCCcccc
Q 005257          506 --------------------------------------------NGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVF  541 (705)
Q Consensus       506 --------------------------------------------~~kL~DFGla~~~~~~~~~~~~~~~gt~~y~APE~~  541 (705)
                                                                  .+||+|||+++.....    .....||+.|+|||++
T Consensus       190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~----~~~~~gt~~y~aPE~~  265 (397)
T 1wak_A          190 LAAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKH----FTEDIQTRQYRSLEVL  265 (397)
T ss_dssp             HHHHHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBC----SCSCCSCGGGCCHHHH
T ss_pred             hhhhhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEecccccccccccc----CccCCCCCcccCChhh
Confidence                                                        7999999999876533    2334789999999999


Q ss_pred             ccCCCCccccEEEEehhHHHHhhCCCCCCCCCcc----HHHHHHHHH-HhCchhHHHH----------------------
Q 005257          542 SSGRASTQTDVFGFGILILEVLSGRRPIEEGKPN----LVEMVWELM-VQGKLLDALD----------------------  594 (705)
Q Consensus       542 ~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~----~~~~v~~~~-~~~~~~~~id----------------------  594 (705)
                      .+..++.++|||||||++|||++|+.||......    ..+...... ..+.....+.                      
T Consensus       266 ~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  345 (397)
T 1wak_A          266 IGSGYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHITKL  345 (397)
T ss_dssp             HTSCCCTHHHHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHHHHHHCSCCHHHHHHCTTGGGTBCTTSSBSSCCCC
T ss_pred             cCCCCCcHHHHHHHHHHHHHHhhCCCCCCCCcccccCchHHHHHHHHHhcCCCChHHhhcccccccccCCcccccccccc
Confidence            9989999999999999999999999999754321    111111111 1111111100                      


Q ss_pred             ------HhhhcCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 005257          595 ------ARLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKV  635 (705)
Q Consensus       595 ------~~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  635 (705)
                            ..+......+......+.+++..||+.||++|||+.|++++
T Consensus       346 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h  392 (397)
T 1wak_A          346 KPWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLRH  392 (397)
T ss_dssp             CCCCHHHHHHHTSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHHHTS
T ss_pred             CCcchhHhhhhhcccchhhHHHHHHHHHHHhccChhhcCCHHHHhhC
Confidence                  01111123466778889999999999999999999999874

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}

Probab=100.00  E-value=1.7e-38  Score=359.30  Aligned_cols=253  Identities=24%  Similarity=0.360  Sum_probs=204.9

Q ss_pred             HhCCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCCc-------------hhHHHHHHHHHHhccCCCCCcceeee
Q 005257          362 ATKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHEND-------------GGTRAFLAEISSLGRLKHKSLVGLRG  428 (705)
Q Consensus       362 at~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~-------------~~~~~~~~Ei~~l~~l~Hpniv~l~g  428 (705)
                      ..++|...++||+|+||+||+|.+..+++.||||++.....             ...+.+.+|+.++++++||||+++++
T Consensus        34 i~~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~  113 (504)
T 3q5i_A           34 IGESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFD  113 (504)
T ss_dssp             GGGTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEE
T ss_pred             cccceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEE
Confidence            45679999999999999999999999999999999875421             23567899999999999999999999


Q ss_pred             eeeeccCceEEEEeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCC---
Q 005257          429 WCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEM---  505 (705)
Q Consensus       429 ~~~~~~~~~~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~---  505 (705)
                      ++.. ...+++||||+++|+|.+++....   .+++.++..++.||+.||.|||+   .+|+||||||+|||++.++   
T Consensus       114 ~~~~-~~~~~lv~e~~~gg~L~~~l~~~~---~~~~~~~~~i~~qi~~~l~~lH~---~~ivH~Dlkp~Nil~~~~~~~~  186 (504)
T 3q5i_A          114 VFED-KKYFYLVTEFYEGGELFEQIINRH---KFDECDAANIMKQILSGICYLHK---HNIVHRDIKPENILLENKNSLL  186 (504)
T ss_dssp             EEEC-SSEEEEEEECCTTCBHHHHHHHHS---CCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEESSTTCCS
T ss_pred             EEEc-CCEEEEEEecCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHH---CCeEeCCCcHHHEEEecCCCCc
Confidence            9876 678999999999999999997643   69999999999999999999999   9999999999999998775   


Q ss_pred             CeeeeeeccceecCCCCcceeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHH
Q 005257          506 NGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMV  585 (705)
Q Consensus       506 ~~kL~DFGla~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~  585 (705)
                      .+||+|||+++.......  .....||+.|+|||++. +.++.++||||+||++|||++|+.||.....   ..+...+.
T Consensus       187 ~~kl~Dfg~a~~~~~~~~--~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~---~~~~~~i~  260 (504)
T 3q5i_A          187 NIKIVDFGLSSFFSKDYK--LRDRLGTAYYIAPEVLK-KKYNEKCDVWSCGVIMYILLCGYPPFGGQND---QDIIKKVE  260 (504)
T ss_dssp             SEEECCCTTCEECCTTSC--BCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH---HHHHHHHH
T ss_pred             cEEEEECCCCEEcCCCCc--cccccCCcCCCCHHHhc-cCCCchHHHHHHHHHHHHHHhCCCCCCCCCH---HHHHHHHH
Confidence            699999999987755432  23357999999999987 4689999999999999999999999986543   12223333


Q ss_pred             hCchhHHHHHhhhcCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 005257          586 QGKLLDALDARLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKV  635 (705)
Q Consensus       586 ~~~~~~~id~~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  635 (705)
                      .+........ .   .    .....+.+++..||+.||.+|||+.|++++
T Consensus       261 ~~~~~~~~~~-~---~----~~s~~~~~li~~~L~~dp~~R~t~~e~l~h  302 (504)
T 3q5i_A          261 KGKYYFDFND-W---K----NISDEAKELIKLMLTYDYNKRCTAEEALNS  302 (504)
T ss_dssp             HCCCCCCHHH-H---T----TSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred             cCCCCCCccc-c---C----CCCHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence            3321100000 0   1    123568899999999999999999999874

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...

Probab=100.00  E-value=1.1e-38  Score=339.99  Aligned_cols=258  Identities=19%  Similarity=0.265  Sum_probs=203.1

Q ss_pred             CCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCCchhHHHHHHHHHHhccCC-CCCcceeeeeeeec-cCceEEEE
Q 005257          364 KGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLK-HKSLVGLRGWCKRE-KGSLMLVY  441 (705)
Q Consensus       364 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~~~~~~~~~Ei~~l~~l~-Hpniv~l~g~~~~~-~~~~~lV~  441 (705)
                      ++|+..+.||+|+||+||+|.+..+++.||||+++..   ..+.+.+|++++++++ ||||+++++++... ....++||
T Consensus        36 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~lv~  112 (330)
T 3nsz_A           36 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPV---KKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVF  112 (330)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC---CHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEEEEE
T ss_pred             CceEEEEEecccCCeEEEEEEECCCCcEEEEEEeccc---chHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceEEEE
Confidence            5688899999999999999999989999999998643   3567899999999997 99999999988753 45689999


Q ss_pred             eeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCC-CeeeeeeccceecCC
Q 005257          442 DYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEM-NGRLGDFGLARMHGH  520 (705)
Q Consensus       442 E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~-~~kL~DFGla~~~~~  520 (705)
                      ||+++++|.+++.      .+++.++..++.|++.||.|||+   .+|+||||||+|||++.++ .+||+|||+++....
T Consensus       113 e~~~~~~l~~~~~------~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~  183 (330)
T 3nsz_A          113 EHVNNTDFKQLYQ------TLTDYDIRFYMYEILKALDYCHS---MGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHP  183 (330)
T ss_dssp             ECCCCCCHHHHGG------GCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEEETTTTEEEECCCTTCEECCT
T ss_pred             eccCchhHHHHHH------hCCHHHHHHHHHHHHHHHHHHHh---CCeeeCCCCHHHEEEcCCCCEEEEEeCCCceEcCC
Confidence            9999999999884      48899999999999999999998   9999999999999999776 899999999987654


Q ss_pred             CCcceeeeeeccccCCCcccccc-CCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHH--HHHHhCchhHHHHHhh
Q 005257          521 GQVASTTRVVGTVGYLAPEVFSS-GRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVW--ELMVQGKLLDALDARL  597 (705)
Q Consensus       521 ~~~~~~~~~~gt~~y~APE~~~~-~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~--~~~~~~~~~~~id~~l  597 (705)
                      ...  .....||+.|+|||++.+ ..++.++|||||||++|||++|+.||............  .........+.++...
T Consensus       184 ~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~  261 (330)
T 3nsz_A          184 GQE--YNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYN  261 (330)
T ss_dssp             TCC--CCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTT
T ss_pred             CCc--cccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCchHHHHHHHHHhcCCchhhhHHHHhc
Confidence            432  223478999999999877 67899999999999999999999999765432211111  1111111111111100


Q ss_pred             h-----------c----------CCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 005257          598 R-----------A----------KGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKV  635 (705)
Q Consensus       598 ~-----------~----------~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  635 (705)
                      .           .          ...........+.+++..||+.||++|||+.|++++
T Consensus       262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~h  320 (330)
T 3nsz_A          262 IELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEH  320 (330)
T ss_dssp             CCCCTHHHHHHCCCCCCCGGGGCCTTTGGGCCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred             cccccchhhhhhhccccchhhhccccccccCCHHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence            0           0          000011134678999999999999999999999884

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...

Probab=100.00  E-value=1.1e-38  Score=346.71  Aligned_cols=260  Identities=22%  Similarity=0.296  Sum_probs=195.8

Q ss_pred             hCCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccC--CchhHHHHHHHHHHhccCCCCCcceeeeeeeecc-----C
Q 005257          363 TKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHE--NDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREK-----G  435 (705)
Q Consensus       363 t~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~--~~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~-----~  435 (705)
                      .++|...+.||+|+||.||+|.+..+++.||||++...  .....+.+.+|+.+++.++||||+++++++...+     .
T Consensus        24 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~  103 (371)
T 2xrw_A           24 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQ  103 (371)
T ss_dssp             ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTCC
T ss_pred             hhheeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeecccccccccc
Confidence            46799999999999999999999999999999999754  2344567899999999999999999999886533     2


Q ss_pred             ceEEEEeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccc
Q 005257          436 SLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLA  515 (705)
Q Consensus       436 ~~~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla  515 (705)
                      ..++||||+++ +|.+++..     .+++..+..++.|++.||.|||+   .+|+||||||+|||++.++.+||+|||++
T Consensus       104 ~~~lv~e~~~~-~l~~~~~~-----~~~~~~~~~i~~qi~~al~~lH~---~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a  174 (371)
T 2xrw_A          104 DVYIVMELMDA-NLCQVIQM-----ELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLA  174 (371)
T ss_dssp             EEEEEEECCSE-EHHHHHHS-----CCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTSCEEECCCCC-
T ss_pred             ceEEEEEcCCC-CHHHHHhh-----ccCHHHHHHHHHHHHHHHHHHHH---CCeecccCCHHHEEEcCCCCEEEEEeecc
Confidence            68999999974 78888742     58999999999999999999999   99999999999999999999999999999


Q ss_pred             eecCCCCcceeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHh-Cc------
Q 005257          516 RMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQ-GK------  588 (705)
Q Consensus       516 ~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~-~~------  588 (705)
                      +......  ......||+.|+|||++.+..++.++|||||||++|||++|+.||......  +.....+.. +.      
T Consensus       175 ~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~--~~~~~i~~~~~~~~~~~~  250 (371)
T 2xrw_A          175 RTAGTSF--MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHI--DQWNKVIEQLGTPCPEFM  250 (371)
T ss_dssp             -----------------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHHHHC-CCCCCHHHH
T ss_pred             ccccccc--ccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHH--HHHHHHHHHhCCCCHHHH
Confidence            8654322  223457899999999999989999999999999999999999999865421  111111111 00      


Q ss_pred             --hhHHHHHhhhcCCC---C-----------------CHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 005257          589 --LLDALDARLRAKGG---F-----------------DEDEVERVLHLGLLCAYPDPRARPTMRQVVKV  635 (705)
Q Consensus       589 --~~~~id~~l~~~~~---~-----------------~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  635 (705)
                        +...+.........   .                 .......+.+++..||+.||++|||+.|++++
T Consensus       251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~h  319 (371)
T 2xrw_A          251 KKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQH  319 (371)
T ss_dssp             TTSCHHHHHHHHSSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred             HHhhhHHHHHHhhCccccccchhhhcccccCcccccccccccHHHHHHHHHHCcCChhhCCCHHHHhCC
Confidence              00000000000000   0                 11235678999999999999999999999884

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}

Probab=100.00  E-value=5.7e-39  Score=342.28  Aligned_cols=285  Identities=23%  Similarity=0.338  Sum_probs=206.6

Q ss_pred             CCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCCch-hHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEEEEe
Q 005257          364 KGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDG-GTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYD  442 (705)
Q Consensus       364 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~~-~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~lV~E  442 (705)
                      ++|...+.||+|+||+||+|.+..+++.||||++...... ....+.+|++++++++||||+++++++.. .+..++|||
T Consensus         2 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-~~~~~lv~e   80 (324)
T 3mtl_A            2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHT-EKSLTLVFE   80 (324)
T ss_dssp             CSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC------CCCCCCCHHHHSCCCCTTBCCEEEEEEC-SSCEEEEEE
T ss_pred             CceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccccccchhHHHHHHHHHhcCCCCCCeeeeEEee-CCEEEEEec
Confidence            4688899999999999999999989999999998654322 22245679999999999999999999876 678999999


Q ss_pred             eCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecCCCC
Q 005257          443 YMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQ  522 (705)
Q Consensus       443 ~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~~~~  522 (705)
                      |++ |+|.+++.....  .+++.++..++.|++.||.|||+   .+|+||||||+|||++.++.+||+|||+++......
T Consensus        81 ~~~-~~l~~~~~~~~~--~~~~~~~~~~~~qi~~aL~~LH~---~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~  154 (324)
T 3mtl_A           81 YLD-KDLKQYLDDCGN--IINMHNVKLFLFQLLRGLAYCHR---QKVLHRDLKPQNLLINERGELKLADFGLARAKSIPT  154 (324)
T ss_dssp             CCS-EEHHHHHHHTTT--CCCHHHHHHHHHHHHHHHHHHHH---TTEEESSCCGGGEEECTTCCEEECSSSEEECC----
T ss_pred             ccc-cCHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHH---CCccCCCcCHHHEEECCCCCEEEccCcccccccCCc
Confidence            997 599999876543  68999999999999999999998   999999999999999999999999999998654332


Q ss_pred             cceeeeeeccccCCCcccccc-CCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhHHHHHhhhcCC
Q 005257          523 VASTTRVVGTVGYLAPEVFSS-GRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRAKG  601 (705)
Q Consensus       523 ~~~~~~~~gt~~y~APE~~~~-~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~l~~~~  601 (705)
                      . ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||......  +.                      
T Consensus       155 ~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~--~~----------------------  209 (324)
T 3mtl_A          155 K-TYDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVE--EQ----------------------  209 (324)
T ss_dssp             ---------CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH--HH----------------------
T ss_pred             c-ccccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH--HH----------------------
Confidence            2 2233578999999999876 56899999999999999999999999764421  00                      


Q ss_pred             CCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHhccccCC----CCCcchhhHHHHHHhhccccccccccccccCCC
Q 005257          602 GFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLEGKIEAGI----ENETEDMDAYLLQQVKSKDMWANYSRSFGYGYA  677 (705)
Q Consensus       602 ~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~  677 (705)
                               +..+...+-.+.+...|........-.-..+...    ..........+.+++..+..++|..|.++.+++
T Consensus       210 ---------~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l  280 (324)
T 3mtl_A          210 ---------LHFIFRILGTPTEETWPGILSNEEFKTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAM  280 (324)
T ss_dssp             ---------HHHHHHHHCCCCTTTSTTGGGCHHHHHTCCCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHT
T ss_pred             ---------HHHHHHHhCCCChHhchhhhcchhhcccccccccchhhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHHh
Confidence                     1111111222222222222111110000000000    000112344567788888889999999999999


Q ss_pred             CCCCcccccccc
Q 005257          678 THPTFHDIRQSN  689 (705)
Q Consensus       678 ~hp~f~~~~~~~  689 (705)
                      +||||.+.....
T Consensus       281 ~hp~f~~~~~~~  292 (324)
T 3mtl_A          281 KHPFFLSLGERI  292 (324)
T ss_dssp             TSGGGGGGCSTT
T ss_pred             cChhhhhccccc
Confidence            999998876543

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=2.8e-39  Score=347.96  Aligned_cols=267  Identities=25%  Similarity=0.330  Sum_probs=199.1

Q ss_pred             HHHhCCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCCch-----hHHHHHHHHHHhccCCCCCcceeeeeeeecc
Q 005257          360 EAATKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDG-----GTRAFLAEISSLGRLKHKSLVGLRGWCKREK  434 (705)
Q Consensus       360 ~~at~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~~-----~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~  434 (705)
                      ....++|...+.||+|+||.||+|.+..+++.||||++......     ..+.+.+|++++++++||||+++++++.. .
T Consensus         6 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-~   84 (346)
T 1ua2_A            6 KSRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGH-K   84 (346)
T ss_dssp             -------CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECC-T
T ss_pred             HHHhcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEee-C
Confidence            34457899999999999999999999988999999998654221     23468899999999999999999998876 6


Q ss_pred             CceEEEEeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeecc
Q 005257          435 GSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGL  514 (705)
Q Consensus       435 ~~~~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGl  514 (705)
                      ...++||||+++ +|..++....  ..+++.++..++.|++.||.|||+   .+|+||||||+|||++.++.+||+|||+
T Consensus        85 ~~~~lv~e~~~~-~l~~~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~  158 (346)
T 1ua2_A           85 SNISLVFDFMET-DLEVIIKDNS--LVLTPSHIKAYMLMTLQGLEYLHQ---HWILHRDLKPNNLLLDENGVLKLADFGL  158 (346)
T ss_dssp             TCCEEEEECCSE-EHHHHHTTCC--SSCCSSHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTCCEEECCCGG
T ss_pred             CceEEEEEcCCC-CHHHHHHhcC--cCCCHHHHHHHHHHHHHHHHHHHH---CCEECCCCCHHHEEEcCCCCEEEEeccc
Confidence            788999999986 8988886533  368999999999999999999999   9999999999999999999999999999


Q ss_pred             ceecCCCCcceeeeeeccccCCCccccccC-CCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHh-CchhHH
Q 005257          515 ARMHGHGQVASTTRVVGTVGYLAPEVFSSG-RASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQ-GKLLDA  592 (705)
Q Consensus       515 a~~~~~~~~~~~~~~~gt~~y~APE~~~~~-~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~-~~~~~~  592 (705)
                      ++....... ......||+.|+|||++.+. .++.++|||||||++|||++|..||......  +........ +.....
T Consensus       159 a~~~~~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~~~--~~~~~i~~~~~~~~~~  235 (346)
T 1ua2_A          159 AKSFGSPNR-AYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDL--DQLTRIFETLGTPTEE  235 (346)
T ss_dssp             GSTTTSCCC-CCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHHHHHHHCCCCTT
T ss_pred             ceeccCCcc-cCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCCHH--HHHHHHHHHcCCCChh
Confidence            987643322 22335789999999998764 5899999999999999999999998765421  111111110 100000


Q ss_pred             HHHhhh---------cCCCCC-----HHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Q 005257          593 LDARLR---------AKGGFD-----EDEVERVLHLGLLCAYPDPRARPTMRQVVKVL  636 (705)
Q Consensus       593 id~~l~---------~~~~~~-----~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L  636 (705)
                      .-+...         .....+     ......+.+++..||+.||++|||+.|++++-
T Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h~  293 (346)
T 1ua2_A          236 QWPDMCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMK  293 (346)
T ss_dssp             TSSSTTSSTTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTSG
T ss_pred             hhhhhccCcccccccccCCCChHHhhccCCHHHHHHHHHHhccChhhCCCHHHHhcCh
Confidence            000000         000001     12236789999999999999999999999853

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}

Probab=100.00  E-value=8.4e-39  Score=349.09  Aligned_cols=264  Identities=17%  Similarity=0.224  Sum_probs=199.3

Q ss_pred             HHHhCCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCCchhHHHHHHHHHHhccCCCCCcceeeeeeeec------
Q 005257          360 EAATKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKRE------  433 (705)
Q Consensus       360 ~~at~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~------  433 (705)
                      +...++|...+.||+|+||.||+|.+..+++.||||++......    ..+|+++++.++||||+++++++...      
T Consensus         3 ~~~~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~~----~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~   78 (383)
T 3eb0_A            3 ETSSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPRY----KNRELDIMKVLDHVNIIKLVDYFYTTGDEEPK   78 (383)
T ss_dssp             ---CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCTTS----CCHHHHHHTTCCCTTBCCEEEEEEEC------
T ss_pred             ccccceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCcch----HHHHHHHHHHcCCCCccchhheeeecCccccc
Confidence            45677899999999999999999999999999999998654322    23699999999999999999988542      


Q ss_pred             -------------------------------cCceEEEEeeCCCCChhHHHHhc-CCCCcccHHHHHHHHHHHHHHHHHH
Q 005257          434 -------------------------------KGSLMLVYDYMENGSLDKWIFQC-DGSMMLSCEERIRVLKDVAAGVLYL  481 (705)
Q Consensus       434 -------------------------------~~~~~lV~E~~~~gsL~~~L~~~-~~~~~l~~~~~~~i~~qia~gL~yL  481 (705)
                                                     ...+++||||++ |+|.+.+... .....+++..+..++.||+.||.||
T Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~L  157 (383)
T 3eb0_A           79 PPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP-DTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFI  157 (383)
T ss_dssp             -------------------------------CCEEEEEECCCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHH
T ss_pred             ccccccccccccccccccccccccccccCCCceEEEEEEecCC-ccHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHH
Confidence                                           234889999998 5888877642 1223699999999999999999999


Q ss_pred             hcCCCCCeeecCCCCCCeEEc-cCCCeeeeeeccceecCCCCcceeeeeeccccCCCccccccC-CCCccccEEEEehhH
Q 005257          482 HEGWEKKVLHRDIKSSNVLLD-KEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSG-RASTQTDVFGFGILI  559 (705)
Q Consensus       482 H~~~~~~iiHrDLkp~NILld-~~~~~kL~DFGla~~~~~~~~~~~~~~~gt~~y~APE~~~~~-~~s~ksDVwS~Gvvl  559 (705)
                      |+   .+|+||||||+|||++ .++.+||+|||+++.......  .....||+.|+|||++.+. .++.++||||+||++
T Consensus       158 H~---~gi~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il  232 (383)
T 3eb0_A          158 HS---LGICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSEP--SVAYICSRFYRAPELMLGATEYTPSIDLWSIGCVF  232 (383)
T ss_dssp             HT---TTEECSCCCGGGEEEETTTTEEEECCCTTCEECCTTSC--CCCCCCCSSCCCHHHHTTCSSCCTHHHHHHHHHHH
T ss_pred             HH---CcCccCccCHHHEEEcCCCCcEEEEECCCCcccCCCCC--CcCcccCCCccCHHHhcCCCCCCcchhhhhHHHHH
Confidence            98   9999999999999998 688999999999987654432  2335789999999998764 489999999999999


Q ss_pred             HHHhhCCCCCCCCCccHHHHHHHHHH-hCc-hhHHHHHh---hhc-----C------CCCCHHHHHHHHHHHHHcCCCCC
Q 005257          560 LEVLSGRRPIEEGKPNLVEMVWELMV-QGK-LLDALDAR---LRA-----K------GGFDEDEVERVLHLGLLCAYPDP  623 (705)
Q Consensus       560 ~ElltG~~Pf~~~~~~~~~~v~~~~~-~~~-~~~~id~~---l~~-----~------~~~~~~~~~~l~~l~~~Cl~~dP  623 (705)
                      |||++|+.||......  +.....+. .|. ..+.+...   ...     .      ..++......+.+++..||+.||
T Consensus       233 ~ell~g~~pf~~~~~~--~~~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP  310 (383)
T 3eb0_A          233 GELILGKPLFSGETSI--DQLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAIDLLEQILRYEP  310 (383)
T ss_dssp             HHHHHSSCSSCCSSHH--HHHHHHHHHHCCCCHHHHHHHCTTC--CCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSG
T ss_pred             HHHHhCCCCCCCCChH--HHHHHHHHHhCCCCHHHHHHhCcccccccCCccCcccHHhhCCCCCCHHHHHHHHHHccCCh
Confidence            9999999999865431  22211111 111 11111100   000     0      00111234568899999999999


Q ss_pred             CCCCCHHHHHHH
Q 005257          624 RARPTMRQVVKV  635 (705)
Q Consensus       624 ~~RPs~~evl~~  635 (705)
                      ++|||+.|++++
T Consensus       311 ~~R~t~~e~l~h  322 (383)
T 3eb0_A          311 DLRINPYEAMAH  322 (383)
T ss_dssp             GGSCCHHHHHTS
T ss_pred             hhCCCHHHHhcC
Confidence            999999999863

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A

Probab=100.00  E-value=4e-39  Score=375.94  Aligned_cols=250  Identities=24%  Similarity=0.370  Sum_probs=209.1

Q ss_pred             HhCCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccC---CchhHHHHHHHHHHhccC-CCCCcceeeeeeeeccCce
Q 005257          362 ATKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHE---NDGGTRAFLAEISSLGRL-KHKSLVGLRGWCKREKGSL  437 (705)
Q Consensus       362 at~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~---~~~~~~~~~~Ei~~l~~l-~Hpniv~l~g~~~~~~~~~  437 (705)
                      ..++|...+.||+|+||.||+|.+..+++.||||+++..   .....+.+..|..++..+ +||||+++++++.. .+.+
T Consensus       339 ~~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~-~~~~  417 (674)
T 3pfq_A          339 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQT-MDRL  417 (674)
T ss_dssp             -CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBC-SSEE
T ss_pred             cccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEe-CCEE
Confidence            456799999999999999999999999999999998753   234456788999999988 79999999998765 6789


Q ss_pred             EEEEeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeecccee
Q 005257          438 MLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARM  517 (705)
Q Consensus       438 ~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~  517 (705)
                      +|||||+++|+|..++....   .+++.+++.++.||+.||.|||+   .+|+||||||+||||+.++.+||+|||+++.
T Consensus       418 ~lV~E~~~gg~L~~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH~---~gIiHrDLKp~NILl~~~g~ikL~DFGla~~  491 (674)
T 3pfq_A          418 YFVMEYVNGGDLMYHIQQVG---RFKEPHAVFYAAEIAIGLFFLQS---KGIIYRDLKLDNVMLDSEGHIKIADFGMCKE  491 (674)
T ss_dssp             EEEEECCCSCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHH---TSEECCCCCSTTEEECSSSCEEECCCTTCEE
T ss_pred             EEEEeCcCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHh---CCeEeccCChhhEEEcCCCcEEEeecceeec
Confidence            99999999999999998654   69999999999999999999999   9999999999999999999999999999986


Q ss_pred             cCCCCcceeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhHHHHHhh
Q 005257          518 HGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDARL  597 (705)
Q Consensus       518 ~~~~~~~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~l  597 (705)
                      ...... .....+||+.|+|||++.+..++.++|||||||++|||++|+.||.....   ..+.+.+..+          
T Consensus       492 ~~~~~~-~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~~~---~~~~~~i~~~----------  557 (674)
T 3pfq_A          492 NIWDGV-TTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDE---DELFQSIMEH----------  557 (674)
T ss_dssp             CCCTTC-CBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSH---HHHHHHHHSS----------
T ss_pred             cccCCc-ccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCCCCH---HHHHHHHHhC----------
Confidence            443322 23446899999999999999999999999999999999999999987543   1122222222          


Q ss_pred             hcCCCCCHHHHHHHHHHHHHcCCCCCCCCCCH-----HHHHH
Q 005257          598 RAKGGFDEDEVERVLHLGLLCAYPDPRARPTM-----RQVVK  634 (705)
Q Consensus       598 ~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~-----~evl~  634 (705)
                        ...++......+.+++..||+.||++||++     +||++
T Consensus       558 --~~~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~ei~~  597 (674)
T 3pfq_A          558 --NVAYPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKE  597 (674)
T ss_dssp             --CCCCCTTSCHHHHHHHHHHSCSSSTTCTTCSTTHHHHHHS
T ss_pred             --CCCCCccCCHHHHHHHHHHccCCHHHCCCCCCCcHHHHhc
Confidence              123344445678899999999999999997     66665

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*

Probab=100.00  E-value=4.1e-39  Score=363.49  Aligned_cols=252  Identities=23%  Similarity=0.339  Sum_probs=201.9

Q ss_pred             hCCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCC--chhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEEE
Q 005257          363 TKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHEN--DGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLV  440 (705)
Q Consensus       363 t~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~--~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~lV  440 (705)
                      .++|...+.||+|+||+||+|.+..++..||||++....  ....+.+.+|+.+++.++||||++++++|.. ....++|
T Consensus        36 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~~~lv  114 (494)
T 3lij_A           36 SEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFED-KRNYYLV  114 (494)
T ss_dssp             HHHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEEC-SSEEEEE
T ss_pred             hcCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEe-CCEEEEE
Confidence            446888999999999999999999999999999987653  3346788999999999999999999999876 6789999


Q ss_pred             EeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccC---CCeeeeeecccee
Q 005257          441 YDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKE---MNGRLGDFGLARM  517 (705)
Q Consensus       441 ~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~---~~~kL~DFGla~~  517 (705)
                      |||+++|+|.+++....   .+++.++..++.||+.||.|||+   .+|+||||||+|||++.+   +.+||+|||+++.
T Consensus       115 ~e~~~~g~L~~~~~~~~---~~~~~~~~~i~~qi~~~l~~lH~---~~ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~  188 (494)
T 3lij_A          115 MECYKGGELFDEIIHRM---KFNEVDAAVIIKQVLSGVTYLHK---HNIVHRDLKPENLLLESKEKDALIKIVDFGLSAV  188 (494)
T ss_dssp             EECCCSCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEESCSSTTCCEEECCCTTCEE
T ss_pred             EecCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHH---CCceeccCChhhEEEeCCCCCCcEEEEECCCCeE
Confidence            99999999999887643   68999999999999999999998   999999999999999764   4599999999987


Q ss_pred             cCCCCcceeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhHHHHHhh
Q 005257          518 HGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDARL  597 (705)
Q Consensus       518 ~~~~~~~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~l  597 (705)
                      ......  ....+||+.|+|||++. +.++.++||||+||++|||++|+.||.....   ..+...+..+.....     
T Consensus       189 ~~~~~~--~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~---~~~~~~i~~~~~~~~-----  257 (494)
T 3lij_A          189 FENQKK--MKERLGTAYYIAPEVLR-KKYDEKCDVWSIGVILFILLAGYPPFGGQTD---QEILRKVEKGKYTFD-----  257 (494)
T ss_dssp             CBTTBC--BCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH---HHHHHHHHHTCCCCC-----
T ss_pred             CCCCcc--ccccCCCcCeeCHHHHc-ccCCCchhHHHHHHHHHHHHhCCCCCCCCCH---HHHHHHHHhCCCCCC-----
Confidence            764432  23457999999999986 4699999999999999999999999986543   122222222221100     


Q ss_pred             hcCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 005257          598 RAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKV  635 (705)
Q Consensus       598 ~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  635 (705)
                         ..........+.+++..||+.||.+|||+.|++++
T Consensus       258 ---~~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~h  292 (494)
T 3lij_A          258 ---SPEWKNVSEGAKDLIKQMLQFDSQRRISAQQALEH  292 (494)
T ss_dssp             ---SGGGTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTC
T ss_pred             ---chhcccCCHHHHHHHHHHCCCChhhCccHHHHhcC
Confidence               00001223567899999999999999999999863

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*

Probab=100.00  E-value=6.6e-39  Score=355.31  Aligned_cols=200  Identities=20%  Similarity=0.262  Sum_probs=173.9

Q ss_pred             hCCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCCchhHHHHHHHHHHhccC------CCCCcceeeeeeeeccCc
Q 005257          363 TKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRL------KHKSLVGLRGWCKREKGS  436 (705)
Q Consensus       363 t~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~~~~~~~~~Ei~~l~~l------~Hpniv~l~g~~~~~~~~  436 (705)
                      ..+|...+.||+|+||+||+|.+..+++.||||++... ....+.+.+|++++..+      +|+||+++++++.. .+.
T Consensus        96 ~~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~-~~~  173 (429)
T 3kvw_A           96 AYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNE-KRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTF-RNH  173 (429)
T ss_dssp             TTTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEE-TTE
T ss_pred             cCcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCc-cchHHHHHHHHHHHHHHhhccccCCcCEEEEEeeccc-CCe
Confidence            45688899999999999999999999999999999643 33446677888887777      57799999998876 678


Q ss_pred             eEEEEeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCC--eeeeeecc
Q 005257          437 LMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMN--GRLGDFGL  514 (705)
Q Consensus       437 ~~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~--~kL~DFGl  514 (705)
                      +++||||+. ++|.+++...... .+++..+..++.||+.||.|||+   .+|+||||||+|||++.++.  +||+|||+
T Consensus       174 ~~lv~e~~~-~~L~~~l~~~~~~-~~~~~~~~~i~~qi~~aL~~LH~---~~ivHrDlKp~NILl~~~~~~~vkL~DFG~  248 (429)
T 3kvw_A          174 ICMTFELLS-MNLYELIKKNKFQ-GFSLPLVRKFAHSILQCLDALHK---NRIIHCDLKPENILLKQQGRSGIKVIDFGS  248 (429)
T ss_dssp             EEEEECCCC-CBHHHHHHHTTTC-CCCHHHHHHHHHHHHHHHHHHHH---HTEECSCCSGGGEEESSTTSCCEEECCCTT
T ss_pred             EEEEEeccC-CCHHHHHHhccCC-CCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHeEEccCCCcceEEeeccc
Confidence            999999996 6999999775433 58999999999999999999998   89999999999999999887  99999999


Q ss_pred             ceecCCCCcceeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhhCCCCCCCCC
Q 005257          515 ARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGK  573 (705)
Q Consensus       515 a~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~  573 (705)
                      ++.....    ....+||+.|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus       249 a~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~  303 (429)
T 3kvw_A          249 SCYEHQR----VYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGED  303 (429)
T ss_dssp             CEETTCC----CCSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred             ceecCCc----ccccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCCCCC
Confidence            9765432    223578999999999999899999999999999999999999998754

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...

Probab=100.00  E-value=1.6e-38  Score=344.45  Aligned_cols=265  Identities=25%  Similarity=0.317  Sum_probs=205.2

Q ss_pred             HhCCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCC-chhHHHHHHHHHHhccCCCCCcceeeeeeeecc----Cc
Q 005257          362 ATKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHEN-DGGTRAFLAEISSLGRLKHKSLVGLRGWCKREK----GS  436 (705)
Q Consensus       362 at~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~-~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~----~~  436 (705)
                      ..++|...+.||+|+||.||+|.+..+++.||||++.... ....+.+.+|++++.+++||||+++++++....    ..
T Consensus        25 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~  104 (364)
T 3qyz_A           25 VGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKD  104 (364)
T ss_dssp             CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCC
T ss_pred             ccccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEeccccCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccce
Confidence            3467999999999999999999999999999999997543 334577899999999999999999999886432    46


Q ss_pred             eEEEEeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccce
Q 005257          437 LMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLAR  516 (705)
Q Consensus       437 ~~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~  516 (705)
                      .++||||++ |+|.+++...    .+++.++..++.|++.||.|||+   .+|+||||||+|||++.++.+||+|||+++
T Consensus       105 ~~iv~e~~~-~~L~~~l~~~----~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~  176 (364)
T 3qyz_A          105 VYIVQDLME-TDLYKLLKTQ----HLSNDHICYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLAR  176 (364)
T ss_dssp             EEEEEECCS-EEHHHHHHHC----CCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECCCTTCE
T ss_pred             EEEEEcccC-cCHHHHHHhC----CCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCChHhEEECCCCCEEEEeCcceE
Confidence            899999997 5999988652    58999999999999999999999   999999999999999999999999999998


Q ss_pred             ecCCCCcce--eeeeeccccCCCcccccc-CCCCccccEEEEehhHHHHhhCCCCCCCCCcc-HHHHHHHHHHhCchhHH
Q 005257          517 MHGHGQVAS--TTRVVGTVGYLAPEVFSS-GRASTQTDVFGFGILILEVLSGRRPIEEGKPN-LVEMVWELMVQGKLLDA  592 (705)
Q Consensus       517 ~~~~~~~~~--~~~~~gt~~y~APE~~~~-~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~-~~~~v~~~~~~~~~~~~  592 (705)
                      .........  .....||+.|+|||++.+ ..++.++|||||||++|||++|+.||...... ....+....... ..+.
T Consensus       177 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~-~~~~  255 (364)
T 3qyz_A          177 VADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSP-SQED  255 (364)
T ss_dssp             ECCGGGCBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGGGHHHHHHHHHCSC-CHHH
T ss_pred             ecCCCCCccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCChHHHHHHHHHHhCCC-CHHH
Confidence            765332211  234589999999998754 45899999999999999999999999765432 111111111110 0000


Q ss_pred             H-----------HHhhhcCCCCC-----HHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 005257          593 L-----------DARLRAKGGFD-----EDEVERVLHLGLLCAYPDPRARPTMRQVVKV  635 (705)
Q Consensus       593 i-----------d~~l~~~~~~~-----~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  635 (705)
                      +           ...+......+     ......+.+++..||+.||++|||+.|++++
T Consensus       256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h  314 (364)
T 3qyz_A          256 LNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAH  314 (364)
T ss_dssp             HHTCCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred             HHHhhhhhHHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence            0           00000001111     1123568899999999999999999999884

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*

Probab=100.00  E-value=3.6e-39  Score=362.96  Aligned_cols=252  Identities=27%  Similarity=0.374  Sum_probs=207.5

Q ss_pred             hCCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCC---chhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEE
Q 005257          363 TKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHEN---DGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLML  439 (705)
Q Consensus       363 t~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~---~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~l  439 (705)
                      .++|...+.||+|+||.||+|.+..+++.||||++....   ....+.+.+|+.++++++||||+++++++.. .+..++
T Consensus        25 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~~~l  103 (484)
T 3nyv_A           25 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFED-KGYFYL  103 (484)
T ss_dssp             HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEEC-SSEEEE
T ss_pred             cCceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEe-CCEEEE
Confidence            456888999999999999999999999999999986542   3456789999999999999999999999876 678999


Q ss_pred             EEeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEE---ccCCCeeeeeeccce
Q 005257          440 VYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLL---DKEMNGRLGDFGLAR  516 (705)
Q Consensus       440 V~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILl---d~~~~~kL~DFGla~  516 (705)
                      ||||+.+|+|.+++....   .+++.++..++.||+.||.|||+   ++|+||||||+|||+   +.++.+||+|||+++
T Consensus       104 v~e~~~~~~L~~~~~~~~---~~~~~~~~~i~~qi~~~l~~lH~---~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~  177 (484)
T 3nyv_A          104 VGEVYTGGELFDEIISRK---RFSEVDAARIIRQVLSGITYMHK---NKIVHRDLKPENLLLESKSKDANIRIIDFGLST  177 (484)
T ss_dssp             EECCCCSCBHHHHHHTCS---CCBHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEESSSSTTCCEEECCTTHHH
T ss_pred             EEecCCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHH---CCeeeCCCCHHHEEEecCCCCCcEEEEeeeeeE
Confidence            999999999999987543   69999999999999999999999   999999999999999   467899999999998


Q ss_pred             ecCCCCcceeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhHHHHHh
Q 005257          517 MHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDAR  596 (705)
Q Consensus       517 ~~~~~~~~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~  596 (705)
                      .......  .....||+.|+|||++.+ .++.++||||+||++|||++|+.||......   .+...+..+.....    
T Consensus       178 ~~~~~~~--~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~---~~~~~i~~~~~~~~----  247 (484)
T 3nyv_A          178 HFEASKK--MKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGANEY---DILKKVEKGKYTFE----  247 (484)
T ss_dssp             HBCCCCS--HHHHTTGGGTCCHHHHHT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH---HHHHHHHHCCCCCC----
T ss_pred             Ecccccc--cccCCCCccccCceeecC-CCCCcceeHHHHHHHHHHHHCCCCCCCCCHH---HHHHHHHcCCCCCC----
Confidence            7654432  233579999999999865 6999999999999999999999999865431   12222322221100    


Q ss_pred             hhcCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 005257          597 LRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKV  635 (705)
Q Consensus       597 l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  635 (705)
                          ..........+.+++..||+.||++|||+.|++++
T Consensus       248 ----~~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~h  282 (484)
T 3nyv_A          248 ----LPQWKKVSESAKDLIRKMLTYVPSMRISARDALDH  282 (484)
T ss_dssp             ----SGGGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred             ----CcccccCCHHHHHHHHHHCCCChhHCcCHHHHhhC
Confidence                00001234568899999999999999999999874

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}

Probab=100.00  E-value=7.5e-39  Score=338.97  Aligned_cols=253  Identities=25%  Similarity=0.383  Sum_probs=203.1

Q ss_pred             HhCCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCCchhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEEEE
Q 005257          362 ATKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVY  441 (705)
Q Consensus       362 at~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~lV~  441 (705)
                      ..++|...+.||+|+||.||+|.+..+++.||||++....  ..+.+.+|+.++.+++||||+++++++.. .+..++||
T Consensus        27 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~--~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~lv~  103 (314)
T 3com_A           27 PEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES--DLQEIIKEISIMQQCDSPHVVKYYGSYFK-NTDLWIVM  103 (314)
T ss_dssp             ---CEEEEEECC----CEEEEEEETTTCCEEEEEEEETTS--CCHHHHHHHHHHHTCCCTTBCCEEEEEEE-TTEEEEEE
T ss_pred             chhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCchH--HHHHHHHHHHHHHhCCCCCCccEEEEEEe-CCEEEEEe
Confidence            4567899999999999999999999889999999997543  45778999999999999999999999876 67889999


Q ss_pred             eeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecCCC
Q 005257          442 DYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHG  521 (705)
Q Consensus       442 E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~~~  521 (705)
                      ||+++++|.+++.....  .+++.+++.++.|++.||.|||+   .+++|+||||+||+++.++.+||+|||++......
T Consensus       104 e~~~~~~L~~~~~~~~~--~~~~~~~~~i~~~i~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~  178 (314)
T 3com_A          104 EYCGAGSVSDIIRLRNK--TLTEDEIATILQSTLKGLEYLHF---MRKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDT  178 (314)
T ss_dssp             ECCTTEEHHHHHHHHTC--CCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTCCEEECCCTTCEECBTT
T ss_pred             ecCCCCCHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHh---CCCcCCCcCHHHEEECCCCCEEEeecccchhhhhh
Confidence            99999999999974332  68999999999999999999998   99999999999999999999999999999876543


Q ss_pred             CcceeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhHHHHHhhhcCC
Q 005257          522 QVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRAKG  601 (705)
Q Consensus       522 ~~~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~l~~~~  601 (705)
                      .. ......||+.|+|||++.+..++.++|||||||++|||++|+.||......  ...... ...         .....
T Consensus       179 ~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~--~~~~~~-~~~---------~~~~~  245 (314)
T 3com_A          179 MA-KRNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPM--RAIFMI-PTN---------PPPTF  245 (314)
T ss_dssp             BS-CBCCCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSCHH--HHHHHH-HHS---------CCCCC
T ss_pred             cc-ccCccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCChH--HHHHHH-hcC---------CCccc
Confidence            22 223357899999999999888999999999999999999999999765421  111111 111         00001


Q ss_pred             CCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 005257          602 GFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKV  635 (705)
Q Consensus       602 ~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  635 (705)
                      ..+......+.+++..||+.||.+|||+.+++++
T Consensus       246 ~~~~~~~~~l~~li~~~l~~dp~~Rpt~~~ll~~  279 (314)
T 3com_A          246 RKPELWSDNFTDFVKQCLVKSPEQRATATQLLQH  279 (314)
T ss_dssp             SSGGGSCHHHHHHHHHHTCSCTTTSCCHHHHTTS
T ss_pred             CCcccCCHHHHHHHHHHccCChhhCcCHHHHHhC
Confidence            1112234568899999999999999999999873

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*

Probab=100.00  E-value=2.9e-39  Score=345.38  Aligned_cols=262  Identities=24%  Similarity=0.382  Sum_probs=200.8

Q ss_pred             CCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCCc--hhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEEEE
Q 005257          364 KGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHEND--GGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVY  441 (705)
Q Consensus       364 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~--~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~lV~  441 (705)
                      ++|...+.||+|+||.||+|.+..+++.||||++.....  ...+.+.+|++++++++||||+++++++.. .+..++||
T Consensus        25 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-~~~~~lv~  103 (331)
T 4aaa_A           25 EKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKK-KKRWYLVF  103 (331)
T ss_dssp             GGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEE-TTEEEEEE
T ss_pred             hhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeec-CCEEEEEE
Confidence            568889999999999999999999999999999865432  334568899999999999999999999876 67899999


Q ss_pred             eeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecCCC
Q 005257          442 DYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHG  521 (705)
Q Consensus       442 E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~~~  521 (705)
                      ||+++++|.+++....   .+++..+..++.|++.||.|||+   .+|+||||||+|||++.++.+||+|||+++.....
T Consensus       104 e~~~~~~l~~~~~~~~---~~~~~~~~~~~~qi~~~l~~LH~---~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~  177 (331)
T 4aaa_A          104 EFVDHTILDDLELFPN---GLDYQVVQKYLFQIINGIGFCHS---HNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAP  177 (331)
T ss_dssp             ECCSEEHHHHHHHSTT---CCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTSCEEECCCTTC------
T ss_pred             ecCCcchHHHHHhhcc---CCCHHHHHHHHHHHHHHHHHHHH---CCEEccCcChheEEEcCCCcEEEEeCCCceeecCC
Confidence            9999999988765433   58999999999999999999999   99999999999999999999999999999865443


Q ss_pred             CcceeeeeeccccCCCccccccC-CCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHH-HHhCchhHHHHHhhhc
Q 005257          522 QVASTTRVVGTVGYLAPEVFSSG-RASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWEL-MVQGKLLDALDARLRA  599 (705)
Q Consensus       522 ~~~~~~~~~gt~~y~APE~~~~~-~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~-~~~~~~~~~id~~l~~  599 (705)
                      .. ......||+.|+|||++.+. .++.++|||||||++|||++|+.||......  +..... ...+............
T Consensus       178 ~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~  254 (331)
T 4aaa_A          178 GE-VYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDI--DQLYHIMMCLGNLIPRHQELFNK  254 (331)
T ss_dssp             -------CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH--HHHHHHHHHHCSCCHHHHHHHHH
T ss_pred             cc-ccCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcH--HHHHHHHHHhCCCChhhhhHhhh
Confidence            22 22335789999999999775 7899999999999999999999999875432  111111 1112111110000000


Q ss_pred             ----C--------CCCC-----HHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 005257          600 ----K--------GGFD-----EDEVERVLHLGLLCAYPDPRARPTMRQVVKV  635 (705)
Q Consensus       600 ----~--------~~~~-----~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  635 (705)
                          .        ...+     ....+.+.+++..||+.||++|||+.|++++
T Consensus       255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~h  307 (331)
T 4aaa_A          255 NPVFAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLHH  307 (331)
T ss_dssp             CGGGTTCCCCCCSSCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred             ccccccccCccccccchhhhcccchhHHHHHHHHHHhccCcccCCCHHHHhcC
Confidence                0        0000     1224678899999999999999999998874

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*

Probab=100.00  E-value=5.3e-39  Score=346.06  Aligned_cols=265  Identities=26%  Similarity=0.373  Sum_probs=202.8

Q ss_pred             CCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCC--chhHHHHHHHHHHhccCCCCCcceeeeeeeec-------c
Q 005257          364 KGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHEN--DGGTRAFLAEISSLGRLKHKSLVGLRGWCKRE-------K  434 (705)
Q Consensus       364 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~--~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~-------~  434 (705)
                      ++|...+.||+|+||.||+|.+..+++.||||++....  ......+.+|+++++.++||||+++++++...       .
T Consensus        17 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~   96 (351)
T 3mi9_A           17 SKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCK   96 (351)
T ss_dssp             GGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC--------
T ss_pred             cceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeeccccccccCC
Confidence            57889999999999999999999899999999986553  23356788999999999999999999998753       3


Q ss_pred             CceEEEEeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeecc
Q 005257          435 GSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGL  514 (705)
Q Consensus       435 ~~~~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGl  514 (705)
                      +.+++||||+++ +|.+.+.....  .+++.++..++.|++.||.|||+   .+|+||||||+|||++.++.+||+|||+
T Consensus        97 ~~~~lv~e~~~~-~l~~~l~~~~~--~~~~~~~~~i~~qi~~~l~~LH~---~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~  170 (351)
T 3mi9_A           97 GSIYLVFDFCEH-DLAGLLSNVLV--KFTLSEIKRVMQMLLNGLYYIHR---NKILHRDMKAANVLITRDGVLKLADFGL  170 (351)
T ss_dssp             CEEEEEEECCSE-EHHHHHHCTTS--CCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCCTT
T ss_pred             ceEEEEEeccCC-CHHHHHhhccC--CCCHHHHHHHHHHHHHHHHHHHH---CCeeCCCCCHHHEEEcCCCCEEEccchh
Confidence            468999999975 78777765432  59999999999999999999999   9999999999999999999999999999


Q ss_pred             ceecCCCCc---ceeeeeeccccCCCcccccc-CCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchh
Q 005257          515 ARMHGHGQV---ASTTRVVGTVGYLAPEVFSS-GRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLL  590 (705)
Q Consensus       515 a~~~~~~~~---~~~~~~~gt~~y~APE~~~~-~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~  590 (705)
                      ++.......   .......||+.|+|||++.+ ..++.++|||||||++|||++|+.||............... .+...
T Consensus       171 a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~-~~~~~  249 (351)
T 3mi9_A          171 ARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQL-CGSIT  249 (351)
T ss_dssp             CEECCCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHH-HCCCC
T ss_pred             cccccccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHH-hCCCC
Confidence            987653221   22234578999999999876 45899999999999999999999999875432111111111 11111


Q ss_pred             HHHHHhhh-----cC------CCCC-HH------HHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 005257          591 DALDARLR-----AK------GGFD-ED------EVERVLHLGLLCAYPDPRARPTMRQVVKV  635 (705)
Q Consensus       591 ~~id~~l~-----~~------~~~~-~~------~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  635 (705)
                      ...-+...     ..      .... .+      ....+.+++..||+.||++|||+.|++++
T Consensus       250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h  312 (351)
T 3mi9_A          250 PEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNH  312 (351)
T ss_dssp             TTTSTTGGGCGGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred             hhhccccccchhhcccccccccccCHHHHhhhccCChHHHHHHHHHhcCChhhCCCHHHHhCC
Confidence            00000000     00      0000 00      12457899999999999999999999985

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*

Probab=100.00  E-value=3.1e-38  Score=336.78  Aligned_cols=261  Identities=24%  Similarity=0.319  Sum_probs=205.9

Q ss_pred             hCCCCcceEEeecCceEEEEEEE-cCCCeEEEEEEeccCCchhHHHHHHHHHHhccCCCCC------cceeeeeeeeccC
Q 005257          363 TKGFSEENVIGVGGNGKVYKGVL-EGGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKS------LVGLRGWCKREKG  435 (705)
Q Consensus       363 t~~f~~~~~LG~G~fg~Vy~~~~-~~~~~~vavK~i~~~~~~~~~~~~~Ei~~l~~l~Hpn------iv~l~g~~~~~~~  435 (705)
                      .++|...+.||+|+||.||+|.+ ..+++.||||+++.. ....+.+.+|++++..++|++      ++++++++.. .+
T Consensus        13 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~-~~   90 (339)
T 1z57_A           13 SARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNV-DRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEH-HG   90 (339)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSS-HHHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEE-TT
T ss_pred             cCceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecC-CchhHHHHHHHHHHHHhhhcCCCCceeeEeeeccccc-CC
Confidence            46789999999999999999998 557899999998643 344567889999999987665      8999998876 67


Q ss_pred             ceEEEEeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEcc------------
Q 005257          436 SLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDK------------  503 (705)
Q Consensus       436 ~~~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~------------  503 (705)
                      ..++||||+ +++|.+++..... ..+++.++..++.|++.||.|||+   ++|+||||||+|||++.            
T Consensus        91 ~~~lv~e~~-~~~l~~~l~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~Dlkp~Nil~~~~~~~~~~~~~~~  165 (339)
T 1z57_A           91 HICIVFELL-GLSTYDFIKENGF-LPFRLDHIRKMAYQICKSVNFLHS---NKLTHTDLKPENILFVQSDYTEAYNPKIK  165 (339)
T ss_dssp             EEEEEEECC-CCBHHHHHHHTTT-CCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEESCCCEEEEEC----
T ss_pred             cEEEEEcCC-CCCHHHHHHhcCC-CCCcHHHHHHHHHHHHHHHHHHHH---CCCcCCCCCHHHEEEeccccccccCCccc
Confidence            899999999 8899999976543 268999999999999999999998   99999999999999987            


Q ss_pred             -------CCCeeeeeeccceecCCCCcceeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhhCCCCCCCCCccH
Q 005257          504 -------EMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNL  576 (705)
Q Consensus       504 -------~~~~kL~DFGla~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~  576 (705)
                             ++.+||+|||+++......    ....||+.|+|||++.+..++.++|||||||++|||++|+.||.......
T Consensus       166 ~~~~~~~~~~~kl~Dfg~~~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~  241 (339)
T 1z57_A          166 RDERTLINPDIKVVDFGSATYDDEHH----STLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKE  241 (339)
T ss_dssp             CEEEEESCCCEEECCCSSCEETTSCC----CSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSCHHH
T ss_pred             cccccccCCCceEeeCcccccCcccc----ccccCCccccChHHhhCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHH
Confidence                   6789999999998754322    23578999999999999899999999999999999999999998654321


Q ss_pred             HHHHHHHHHhCchhHHHHH------------------------------hhhcCCCCCHHHHHHHHHHHHHcCCCCCCCC
Q 005257          577 VEMVWELMVQGKLLDALDA------------------------------RLRAKGGFDEDEVERVLHLGLLCAYPDPRAR  626 (705)
Q Consensus       577 ~~~v~~~~~~~~~~~~id~------------------------------~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~R  626 (705)
                      ......... +.....+..                              .+...........+.+.+++..||+.||++|
T Consensus       242 ~~~~~~~~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R  320 (339)
T 1z57_A          242 HLAMMERIL-GPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDPAKR  320 (339)
T ss_dssp             HHHHHHHHH-CSCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTS
T ss_pred             HHHHHHHHh-CCCCHHHHhhccchhHHhhccccccccccccchhhhcCcchhhhcccchhhHHHHHHHHHHHhCcCcccc
Confidence            111111111 111111100                              0000111233556789999999999999999


Q ss_pred             CCHHHHHHH
Q 005257          627 PTMRQVVKV  635 (705)
Q Consensus       627 Ps~~evl~~  635 (705)
                      ||+.|++++
T Consensus       321 pt~~ell~h  329 (339)
T 1z57_A          321 ITLREALKH  329 (339)
T ss_dssp             CCHHHHTTS
T ss_pred             cCHHHHhcC
Confidence            999998864

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}

Probab=100.00  E-value=2.3e-39  Score=344.79  Aligned_cols=263  Identities=24%  Similarity=0.360  Sum_probs=203.9

Q ss_pred             cCHHHHHHHhCCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCCchhHHHHHHHHHHhccC-CCCCcceeeeeeee
Q 005257          354 ITYQEIEAATKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRL-KHKSLVGLRGWCKR  432 (705)
Q Consensus       354 ~~~~el~~at~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~~~~~~~~~Ei~~l~~l-~Hpniv~l~g~~~~  432 (705)
                      +.+.++....++|...+.||+|+||.||+|.+..+++.||||++.... ...+.+.+|+.++.++ +||||+++++++..
T Consensus        14 ~~~~~l~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~   92 (326)
T 2x7f_A           14 IDLSALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG-DEEEEIKQEINMLKKYSHHRNIATYYGAFIK   92 (326)
T ss_dssp             --CCCCCCCTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS-STTHHHHHHHHHHHHHCCSTTBCCEEEEEEE
T ss_pred             ccchhccCCCCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCc-ccHHHHHHHHHHHHhccCCCCeeeeeeEEee
Confidence            444455567788999999999999999999998889999999986543 3457889999999999 89999999999875


Q ss_pred             c-----cCceEEEEeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCe
Q 005257          433 E-----KGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNG  507 (705)
Q Consensus       433 ~-----~~~~~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~  507 (705)
                      .     ...+++||||+++|+|.+++..... ..+++..++.++.||+.||.|||+   .+|+||||||+|||++.++.+
T Consensus        93 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~~i~~qi~~~l~~lH~---~~ivH~dlkp~NIl~~~~~~~  168 (326)
T 2x7f_A           93 KNPPGMDDQLWLVMEFCGAGSVTDLIKNTKG-NTLKEEWIAYICREILRGLSHLHQ---HKVIHRDIKGQNVLLTENAEV  168 (326)
T ss_dssp             CC--CCCCEEEEEEECCTTEEHHHHHHHSGG-GCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCSGGGEEECTTCCE
T ss_pred             ccCccccceEEEEEEcCCCCcHHHHHHhccc-CCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCcHHHEEEcCCCCE
Confidence            3     3578999999999999999976432 268999999999999999999999   999999999999999999999


Q ss_pred             eeeeeccceecCCCCcceeeeeeccccCCCccccc-----cCCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHH
Q 005257          508 RLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFS-----SGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWE  582 (705)
Q Consensus       508 kL~DFGla~~~~~~~~~~~~~~~gt~~y~APE~~~-----~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~  582 (705)
                      ||+|||++........ ......||+.|+|||++.     +..++.++|||||||++|||++|+.||......  .....
T Consensus       169 kl~Dfg~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~--~~~~~  245 (326)
T 2x7f_A          169 KLVDFGVSAQLDRTVG-RRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPM--RALFL  245 (326)
T ss_dssp             EECCCTTTC--------------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTSCHH--HHHHH
T ss_pred             EEeeCcCceecCcCcc-ccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCcHH--HHHHH
Confidence            9999999986543221 223357899999999986     467899999999999999999999999765421  11111


Q ss_pred             HHHhCchhHHHHHhhhcCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 005257          583 LMVQGKLLDALDARLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKV  635 (705)
Q Consensus       583 ~~~~~~~~~~id~~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  635 (705)
                      . ......          ..........+.+++..||..||.+||++.+++++
T Consensus       246 ~-~~~~~~----------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h  287 (326)
T 2x7f_A          246 I-PRNPAP----------RLKSKKWSKKFQSFIESCLVKNHSQRPATEQLMKH  287 (326)
T ss_dssp             H-HHSCCC----------CCSCSCSCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred             h-hcCccc----------cCCccccCHHHHHHHHHHhccChhhCCCHHHHhhC
Confidence            1 111000          01112233568899999999999999999999884

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A

Probab=100.00  E-value=6e-39  Score=335.35  Aligned_cols=253  Identities=22%  Similarity=0.290  Sum_probs=189.2

Q ss_pred             hCCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCCc-hh-HHHHHHHHHHhccCCCCCcceeeeeeeeccCceEEE
Q 005257          363 TKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHEND-GG-TRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLV  440 (705)
Q Consensus       363 t~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~-~~-~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~lV  440 (705)
                      .++|+..+.||+|+||+||+|.+..+++.||||++..... .. .+.+.++...++.++||||+++++++.. ++..++|
T Consensus         6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~-~~~~~lv   84 (290)
T 3fme_A            6 ADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFR-EGDVWIC   84 (290)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEC-SSSEEEE
T ss_pred             HHhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeec-cCCEEEE
Confidence            4678889999999999999999998999999999976532 22 2334555566888999999999999886 6789999


Q ss_pred             EeeCCCCChhHHHHhc-CCCCcccHHHHHHHHHHHHHHHHHHhcCCCC-CeeecCCCCCCeEEccCCCeeeeeeccceec
Q 005257          441 YDYMENGSLDKWIFQC-DGSMMLSCEERIRVLKDVAAGVLYLHEGWEK-KVLHRDIKSSNVLLDKEMNGRLGDFGLARMH  518 (705)
Q Consensus       441 ~E~~~~gsL~~~L~~~-~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~-~iiHrDLkp~NILld~~~~~kL~DFGla~~~  518 (705)
                      |||++ |+|.+++... .....+++..++.++.|++.||.|||+   . +|+||||||+|||++.++.+||+|||+++..
T Consensus        85 ~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~---~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~  160 (290)
T 3fme_A           85 MELMD-TSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHS---KLSVIHRDVKPSNVLINALGQVKMCDFGISGYL  160 (290)
T ss_dssp             EECCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHH---HSCCCCCCCSGGGCEECTTCCEEBCCC------
T ss_pred             Eehhc-cchHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhh---cCCeecCCCCHHHEEECCCCCEEEeecCCcccc
Confidence            99997 5888887642 223379999999999999999999998   7 9999999999999999999999999999876


Q ss_pred             CCCCcceeeeeeccccCCCcccc----ccCCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhHHHH
Q 005257          519 GHGQVASTTRVVGTVGYLAPEVF----SSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALD  594 (705)
Q Consensus       519 ~~~~~~~~~~~~gt~~y~APE~~----~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~~id  594 (705)
                      .....  .....||+.|+|||++    .+..++.++|||||||++|||++|+.||....... ...........      
T Consensus       161 ~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~-~~~~~~~~~~~------  231 (290)
T 3fme_A          161 VDDVA--KDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPF-QQLKQVVEEPS------  231 (290)
T ss_dssp             -----------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSCHH-HHHHHHHHSCC------
T ss_pred             ccccc--ccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccCchH-HHHHHHhccCC------
Confidence            54322  2234789999999996    45678999999999999999999999997643321 11111111111      


Q ss_pred             HhhhcCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHH
Q 005257          595 ARLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVK  634 (705)
Q Consensus       595 ~~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~  634 (705)
                         .  ..........+.+++..||+.||++|||+.|+++
T Consensus       232 ---~--~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~e~l~  266 (290)
T 3fme_A          232 ---P--QLPADKFSAEFVDFTSQCLKKNSKERPTYPELMQ  266 (290)
T ss_dssp             ---C--CCCTTTSCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred             ---C--CcccccCCHHHHHHHHHHhhcChhhCcCHHHHHh
Confidence               0  1111223456889999999999999999999988

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*

Probab=100.00  E-value=1e-38  Score=359.58  Aligned_cols=252  Identities=25%  Similarity=0.338  Sum_probs=204.9

Q ss_pred             hCCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccC--CchhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEEE
Q 005257          363 TKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHE--NDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLV  440 (705)
Q Consensus       363 t~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~--~~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~lV  440 (705)
                      .++|...+.||+|+||+||+|.+..+++.||||++...  .....+.+.+|++++++++||||+++++++.. ...+++|
T Consensus        21 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~~~lv   99 (486)
T 3mwu_A           21 AERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILED-SSSFYIV   99 (486)
T ss_dssp             HHHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEC-SSEEEEE
T ss_pred             hcceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEc-CCEEEEE
Confidence            45688999999999999999999989999999998643  23346788999999999999999999999876 6789999


Q ss_pred             EeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEc---cCCCeeeeeecccee
Q 005257          441 YDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLD---KEMNGRLGDFGLARM  517 (705)
Q Consensus       441 ~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld---~~~~~kL~DFGla~~  517 (705)
                      |||+++|+|.+++....   .+++.++..++.||+.||.|||+   .+|+||||||+|||++   .++.+||+|||+++.
T Consensus       100 ~e~~~~~~L~~~~~~~~---~~~~~~~~~i~~qi~~al~~lH~---~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~  173 (486)
T 3mwu_A          100 GELYTGGELFDEIIKRK---RFSEHDAARIIKQVFSGITYMHK---HNIVHRDLKPENILLESKEKDCDIKIIDFGLSTC  173 (486)
T ss_dssp             ECCCCSCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEESSSSTTCCEEECSCSCTTT
T ss_pred             EEcCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHH---CCeEeccCchHHEEEecCCCCCCEEEEECCcCeE
Confidence            99999999999887653   68999999999999999999999   9999999999999995   456799999999986


Q ss_pred             cCCCCcceeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhHHHHHhh
Q 005257          518 HGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDARL  597 (705)
Q Consensus       518 ~~~~~~~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~l  597 (705)
                      .....  .....+||+.|+|||++.+ .++.++||||+||++|||++|+.||......   .+...+..+.....     
T Consensus       174 ~~~~~--~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~---~~~~~i~~~~~~~~-----  242 (486)
T 3mwu_A          174 FQQNT--KMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEY---DILKRVETGKYAFD-----  242 (486)
T ss_dssp             BCCC------CCTTGGGGCCGGGGGS-CCCHHHHHHHHHHHHHHHHHSSCSSCCSSHH---HHHHHHHHTCCCSC-----
T ss_pred             CCCCC--ccCCCcCCCCCCCHHHhCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCHH---HHHHHHHhCCCCCC-----
Confidence            65432  2233579999999999875 5999999999999999999999999765431   12222222221100     


Q ss_pred             hcCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 005257          598 RAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKV  635 (705)
Q Consensus       598 ~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  635 (705)
                         ..........+.+++..||+.||++|||+.|++++
T Consensus       243 ---~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~~l~h  277 (486)
T 3mwu_A          243 ---LPQWRTISDDAKDLIRKMLTFHPSLRITATQCLEH  277 (486)
T ss_dssp             ---SGGGGGSCHHHHHHHHHHTCSSTTTSCCHHHHHHC
T ss_pred             ---CcccCCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence               00001223567899999999999999999999985

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*

Probab=100.00  E-value=1.8e-39  Score=341.35  Aligned_cols=266  Identities=24%  Similarity=0.388  Sum_probs=187.0

Q ss_pred             HHhCCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCC-chhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEE
Q 005257          361 AATKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHEN-DGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLML  439 (705)
Q Consensus       361 ~at~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~-~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~l  439 (705)
                      ...++|...+.||+|+||.||+|.+..+++.||||++.... ....+++.+|+.++.+++||||+++++++.. .+..++
T Consensus        12 i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~l   90 (303)
T 2vwi_A           12 INRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVV-KDELWL   90 (303)
T ss_dssp             -CCCCCEEEEECC---CCCEEEEEC----CEEEEECCC----------------CCCCCCCTTBCCEEEEEES-SSCEEE
T ss_pred             cchhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhcCCCCEeeEEEEEee-cCCcEE
Confidence            34578999999999999999999998889999999986543 3345678999999999999999999998876 668899


Q ss_pred             EEeeCCCCChhHHHHhc-----CCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeecc
Q 005257          440 VYDYMENGSLDKWIFQC-----DGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGL  514 (705)
Q Consensus       440 V~E~~~~gsL~~~L~~~-----~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGl  514 (705)
                      ||||+++++|.+++...     .....+++..++.++.|++.||.|||+   .+++||||||+||+++.++.+||+|||+
T Consensus        91 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~kl~dfg~  167 (303)
T 2vwi_A           91 VMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHK---NGQIHRDVKAGNILLGEDGSVQIADFGV  167 (303)
T ss_dssp             EEECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCSGGGEEECTTCCEEECCCHH
T ss_pred             EehhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHh---CCCCCCCCChhhEEEcCCCCEEEEeccc
Confidence            99999999999999742     122368999999999999999999998   9999999999999999999999999999


Q ss_pred             ceecCCCCc----ceeeeeeccccCCCcccccc-CCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCch
Q 005257          515 ARMHGHGQV----ASTTRVVGTVGYLAPEVFSS-GRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKL  589 (705)
Q Consensus       515 a~~~~~~~~----~~~~~~~gt~~y~APE~~~~-~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~  589 (705)
                      +........    .......||+.|+|||++.+ ..++.++|||||||++|||++|+.||.......  ...... .+..
T Consensus       168 ~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~--~~~~~~-~~~~  244 (303)
T 2vwi_A          168 SAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMK--VLMLTL-QNDP  244 (303)
T ss_dssp             HHHCC---------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGGG--HHHHHH-TSSC
T ss_pred             hheeccCCCccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCchhh--HHHHHh-ccCC
Confidence            976543221    11233578999999999865 568999999999999999999999998654321  111111 1110


Q ss_pred             hHHHHHhhhcCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 005257          590 LDALDARLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKV  635 (705)
Q Consensus       590 ~~~id~~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  635 (705)
                      .. ....... ..........+.+++..||+.||.+||++.+++++
T Consensus       245 ~~-~~~~~~~-~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h  288 (303)
T 2vwi_A          245 PS-LETGVQD-KEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLRH  288 (303)
T ss_dssp             CC-TTC------CCCCCCCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred             Cc-ccccccc-chhhhhhhHHHHHHHHHHccCChhhCcCHHHHhhC
Confidence            00 0000000 00111223567889999999999999999999873

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*

Probab=100.00  E-value=1.3e-38  Score=334.49  Aligned_cols=253  Identities=24%  Similarity=0.381  Sum_probs=206.4

Q ss_pred             HhCCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCC---------chhHHHHHHHHHHhccCC-CCCcceeeeeee
Q 005257          362 ATKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHEN---------DGGTRAFLAEISSLGRLK-HKSLVGLRGWCK  431 (705)
Q Consensus       362 at~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~---------~~~~~~~~~Ei~~l~~l~-Hpniv~l~g~~~  431 (705)
                      ..++|...+.||+|+||.||+|.+..+++.||||++....         ....+.+.+|++++++++ ||||+++++++.
T Consensus        15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~   94 (298)
T 1phk_A           15 FYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYE   94 (298)
T ss_dssp             CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEE
T ss_pred             hhhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeeec
Confidence            3568899999999999999999999999999999997543         122456889999999996 999999999887


Q ss_pred             eccCceEEEEeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeee
Q 005257          432 REKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGD  511 (705)
Q Consensus       432 ~~~~~~~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~D  511 (705)
                      . +...++||||+++++|.+++....   .+++.++..++.|++.||.|||+   .+++||||||+||+++.++.+||+|
T Consensus        95 ~-~~~~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~kl~d  167 (298)
T 1phk_A           95 T-NTFFFLVFDLMKKGELFDYLTEKV---TLSEKETRKIMRALLEVICALHK---LNIVHRDLKPENILLDDDMNIKLTD  167 (298)
T ss_dssp             C-SSEEEEEEECCTTCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTCCEEECC
T ss_pred             c-CCeEEEEEeccCCCcHHHHHhccC---CCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCcceEEEcCCCcEEEec
Confidence            5 678999999999999999997643   68999999999999999999998   9999999999999999999999999


Q ss_pred             eccceecCCCCcceeeeeeccccCCCccccc------cCCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHH
Q 005257          512 FGLARMHGHGQVASTTRVVGTVGYLAPEVFS------SGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMV  585 (705)
Q Consensus       512 FGla~~~~~~~~~~~~~~~gt~~y~APE~~~------~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~  585 (705)
                      ||++........  .....|++.|+|||++.      ...++.++||||||+++|||++|+.||......   .....+.
T Consensus       168 fg~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~---~~~~~~~  242 (298)
T 1phk_A          168 FGFSCQLDPGEK--LREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQM---LMLRMIM  242 (298)
T ss_dssp             CTTCEECCTTCC--BCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH---HHHHHHH
T ss_pred             ccchhhcCCCcc--cccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCccHH---HHHHHHh
Confidence            999987654332  23357899999999985      456889999999999999999999999764421   1112222


Q ss_pred             hCchhHHHHHhhhcCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHH
Q 005257          586 QGKLLDALDARLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVK  634 (705)
Q Consensus       586 ~~~~~~~id~~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~  634 (705)
                      .+...        ............+.+++..||+.||++|||+.|+++
T Consensus       243 ~~~~~--------~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~  283 (298)
T 1phk_A          243 SGNYQ--------FGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALA  283 (298)
T ss_dssp             HTCCC--------CCTTTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred             cCCcc--------cCcccccccCHHHHHHHHHHccCCcccCCCHHHHHh
Confidence            22110        000011233467889999999999999999999886

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...

Probab=100.00  E-value=1e-38  Score=352.84  Aligned_cols=260  Identities=23%  Similarity=0.294  Sum_probs=196.7

Q ss_pred             CCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCCchhHHHHHHHHHHhccCCCCCcceeeeeeeecc-----CceE
Q 005257          364 KGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREK-----GSLM  438 (705)
Q Consensus       364 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~-----~~~~  438 (705)
                      .+|...+.||+|+||.||+|.+..+++.||||++.....    ...+|+++|++++||||+++++++....     ..++
T Consensus        54 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~~----~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~~~  129 (420)
T 1j1b_A           54 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR----FKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLN  129 (420)
T ss_dssp             EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCTT----SCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEEEE
T ss_pred             ceEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccch----hHHHHHHHHHHcCCCCccceeeEEeccCCCCcceeEE
Confidence            357888999999999999999998899999999865432    2346999999999999999999885422     2367


Q ss_pred             EEEeeCCCCChhHHHHhc-CCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccC-CCeeeeeeccce
Q 005257          439 LVYDYMENGSLDKWIFQC-DGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKE-MNGRLGDFGLAR  516 (705)
Q Consensus       439 lV~E~~~~gsL~~~L~~~-~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~-~~~kL~DFGla~  516 (705)
                      +||||+++ +|.+.+... .....+++..+..++.||+.||.|||+   .+|+||||||+|||++.+ +.+||+|||+++
T Consensus       130 lv~e~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~---~~ivHrDlkp~NILl~~~~~~~kl~DFG~a~  205 (420)
T 1j1b_A          130 LVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAK  205 (420)
T ss_dssp             EEEECCCE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHT---TTEECSCCSGGGEEEETTTTEEEECCCTTCE
T ss_pred             eehhcccc-cHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCChhhEEEeCCCCeEEeccchhhh
Confidence            99999986 666665431 223369999999999999999999998   999999999999999965 568999999998


Q ss_pred             ecCCCCcceeeeeeccccCCCccccccC-CCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHh-Cc-hhHHH
Q 005257          517 MHGHGQVASTTRVVGTVGYLAPEVFSSG-RASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQ-GK-LLDAL  593 (705)
Q Consensus       517 ~~~~~~~~~~~~~~gt~~y~APE~~~~~-~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~-~~-~~~~i  593 (705)
                      .......  ....+||+.|+|||++.+. .++.++|||||||++|||++|+.||.....  .+.+.+.+.. |. ..+.+
T Consensus       206 ~~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~--~~~l~~i~~~lg~p~~~~~  281 (420)
T 1j1b_A          206 QLVRGEP--NVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSG--VDQLVEIIKVLGTPTREQI  281 (420)
T ss_dssp             ECCTTCC--CCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSH--HHHHHHHHHHHCSCCHHHH
T ss_pred             hcccCCC--ceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCCH--HHHHHHHHHHhCCCCHHHH
Confidence            7654332  2335789999999998764 789999999999999999999999987542  1222222111 11 11111


Q ss_pred             HHhhhcCC--------C------CCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 005257          594 DARLRAKG--------G------FDEDEVERVLHLGLLCAYPDPRARPTMRQVVKV  635 (705)
Q Consensus       594 d~~l~~~~--------~------~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  635 (705)
                      ........        .      +.......+.+|+.+||+.||.+||++.|++++
T Consensus       282 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~l~h  337 (420)
T 1j1b_A          282 REMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAH  337 (420)
T ss_dssp             HHHCSCCCCCCCCCCCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred             HhhChhhhhhccCccCCCCHHHhcCCCCCHHHHHHHHHhccCChhHCCCHHHHhCC
Confidence            11000000        0      111224678899999999999999999999874

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*

Probab=100.00  E-value=1.7e-38  Score=343.55  Aligned_cols=272  Identities=22%  Similarity=0.283  Sum_probs=201.2

Q ss_pred             CHHHHHHHhCCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCCch-----------hHHHHHHHHHHhccCCCCCc
Q 005257          355 TYQEIEAATKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDG-----------GTRAFLAEISSLGRLKHKSL  423 (705)
Q Consensus       355 ~~~el~~at~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~~-----------~~~~~~~Ei~~l~~l~Hpni  423 (705)
                      ..+++....++|...+.||+|+||.||+|.+.. ++.||||++......           ..+.+.+|++++++++||||
T Consensus        13 ~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i   91 (362)
T 3pg1_A           13 LIAELHAMQSPYTVQRFISSGSYGAVCAGVDSE-GIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNI   91 (362)
T ss_dssp             HHHHHHHTTCSCEEEEEEEEETTEEEEEEECTT-SCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTB
T ss_pred             HHHHHHHhccceEEeEEeccCCCEEEEEEECCC-CCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCc
Confidence            356778889999999999999999999999865 889999998653221           23789999999999999999


Q ss_pred             ceeeeeeeec----cCceEEEEeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCe
Q 005257          424 VGLRGWCKRE----KGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNV  499 (705)
Q Consensus       424 v~l~g~~~~~----~~~~~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NI  499 (705)
                      +++++++...    ...+++||||++ |+|.+++....  ..+++..+..++.|++.||.|||+   .+|+||||||+||
T Consensus        92 v~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~Dlkp~NI  165 (362)
T 3pg1_A           92 LGLRDIFVHFEEPAMHKLYLVTELMR-TDLAQVIHDQR--IVISPQHIQYFMYHILLGLHVLHE---AGVVHRDLHPGNI  165 (362)
T ss_dssp             CCCSEEEEECCTTTCCEEEEEEECCS-EEHHHHHHCTT--SCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGE
T ss_pred             cceeeeEEeccCCCcceEEEEEccCC-CCHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHH---CcCEecCCChHHE
Confidence            9999988542    236899999997 68888887533  369999999999999999999999   9999999999999


Q ss_pred             EEccCCCeeeeeeccceecCCCCcceeeeeeccccCCCcccccc-CCCCccccEEEEehhHHHHhhCCCCCCCCCcc-HH
Q 005257          500 LLDKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSS-GRASTQTDVFGFGILILEVLSGRRPIEEGKPN-LV  577 (705)
Q Consensus       500 Lld~~~~~kL~DFGla~~~~~~~~~~~~~~~gt~~y~APE~~~~-~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~-~~  577 (705)
                      |++.++.+||+|||+++......  ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||...... ..
T Consensus       166 l~~~~~~~kl~Dfg~~~~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~  243 (362)
T 3pg1_A          166 LLADNNDITICDFNLAREDTADA--NKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQL  243 (362)
T ss_dssp             EECTTCCEEECCTTC-----------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHH
T ss_pred             EEcCCCCEEEEecCccccccccc--ccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCCCHHHHH
Confidence            99999999999999997544332  2234578999999999876 67899999999999999999999999865421 11


Q ss_pred             HHHHHHHHhCchhHHH-----------HHhhhcCCCC-----CHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 005257          578 EMVWELMVQGKLLDAL-----------DARLRAKGGF-----DEDEVERVLHLGLLCAYPDPRARPTMRQVVKV  635 (705)
Q Consensus       578 ~~v~~~~~~~~~~~~i-----------d~~l~~~~~~-----~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  635 (705)
                      ..+..........+..           ...+......     .......+.+++..||+.||++|||+.|++++
T Consensus       244 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h  317 (362)
T 3pg1_A          244 NKIVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALRH  317 (362)
T ss_dssp             HHHHHHHCCCCHHHHHHTSCHHHHHHTTTCCCCCCCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred             HHHHHHcCCCChHHhhhccchhhhHHHHhhcccCChhhHHhhCCCCCHHHHHHHHHHhcCChhhCCCHHHHHcC
Confidence            1111111111111100           0000000000     01123568899999999999999999999874

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}

Probab=100.00  E-value=1e-38  Score=344.59  Aligned_cols=270  Identities=19%  Similarity=0.234  Sum_probs=194.4

Q ss_pred             HHHHHHhCCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCCchhHHHHHHHHHHhccCCCCCcceeeeeeeeccC-
Q 005257          357 QEIEAATKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKG-  435 (705)
Q Consensus       357 ~el~~at~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~-  435 (705)
                      .+.....++|...+.||+|+||.||+|.+..+++.||||++.... .....+.+|++.+..++||||+++++++..... 
T Consensus        16 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~   94 (360)
T 3e3p_A           16 ERSRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDP-RFRNRELQIMQDLAVLHHPNIVQLQSYFYTLGER   94 (360)
T ss_dssp             HHHHHHHTTEEEC----------CEEEEETTTCCEEEEEEEECCT-TCCCHHHHHHHHHHHHCCTTBCCEEEEEEEECSS
T ss_pred             hhchhhccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCc-cccHHHHHHHHHHHhcCCCCcccHHHhhhccccc
Confidence            345566788999999999999999999999899999999986542 334456788888999999999999999865222 


Q ss_pred             -----ceEEEEeeCCCCChhHHHHh-cCCCCcccHHHHHHHHHHHHHHHHHHh--cCCCCCeeecCCCCCCeEEcc-CCC
Q 005257          436 -----SLMLVYDYMENGSLDKWIFQ-CDGSMMLSCEERIRVLKDVAAGVLYLH--EGWEKKVLHRDIKSSNVLLDK-EMN  506 (705)
Q Consensus       436 -----~~~lV~E~~~~gsL~~~L~~-~~~~~~l~~~~~~~i~~qia~gL~yLH--~~~~~~iiHrDLkp~NILld~-~~~  506 (705)
                           .+++||||+++ +|...+.. ......+++..+..++.|++.||.|||  +   .+|+||||||+|||++. ++.
T Consensus        95 ~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~---~~ivH~Dlkp~NIll~~~~~~  170 (360)
T 3e3p_A           95 DRRDIYLNVVMEYVPD-TLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPS---VNVCHRDIKPHNVLVNEADGT  170 (360)
T ss_dssp             CTTCEEEEEEEECCSC-BHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTSTT---TCCBCSCCCGGGEEEETTTTE
T ss_pred             cccceeEEEEeecccc-cHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCCC---CCeecCcCCHHHEEEeCCCCc
Confidence                 27899999986 55544432 233346899999999999999999999  7   99999999999999996 899


Q ss_pred             eeeeeeccceecCCCCcceeeeeeccccCCCccccccC-CCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHH
Q 005257          507 GRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSG-RASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMV  585 (705)
Q Consensus       507 ~kL~DFGla~~~~~~~~~~~~~~~gt~~y~APE~~~~~-~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~  585 (705)
                      +||+|||+++.......  .....||+.|+|||++.+. .++.++|||||||++|||++|+.||......  +.......
T Consensus       171 ~kl~Dfg~a~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~--~~~~~~~~  246 (360)
T 3e3p_A          171 LKLCDFGSAKKLSPSEP--NVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSA--GQLHEIVR  246 (360)
T ss_dssp             EEECCCTTCBCCCTTSC--CCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHHHHH
T ss_pred             EEEeeCCCceecCCCCC--cccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCChH--HHHHHHHH
Confidence            99999999987654332  2234789999999998664 4899999999999999999999999875431  11111111


Q ss_pred             -hCchhHHHHHhhhc---------C---------CCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 005257          586 -QGKLLDALDARLRA---------K---------GGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKV  635 (705)
Q Consensus       586 -~~~~~~~id~~l~~---------~---------~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  635 (705)
                       .+.........+..         .         ..........+.+++..||+.||.+|||+.|++++
T Consensus       247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h  315 (360)
T 3e3p_A          247 VLGCPSREVLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALCH  315 (360)
T ss_dssp             HHCCCCHHHHHHHCTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred             HcCCCCHHHHHhcccchhhccccccccCCcccccchhhccccHHHHHHHHHHhccCccccCCHHHHhcC
Confidence             01111111000000         0         11111245678999999999999999999999874

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*

Probab=100.00  E-value=3.9e-39  Score=336.95  Aligned_cols=259  Identities=23%  Similarity=0.328  Sum_probs=199.5

Q ss_pred             hCCCCcceEEeecCceEEEEEEEcC-CC--eEEEEEEeccC---CchhHHHHHHHHHHhccCCCCCcceeeeeeeeccCc
Q 005257          363 TKGFSEENVIGVGGNGKVYKGVLEG-GG--AEIAVKRISHE---NDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGS  436 (705)
Q Consensus       363 t~~f~~~~~LG~G~fg~Vy~~~~~~-~~--~~vavK~i~~~---~~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~  436 (705)
                      .++|...+.||+|+||+||+|.+.. ++  ..||||+++..   .....+.+.+|++++++++||||+++++++..  ..
T Consensus        17 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--~~   94 (291)
T 1u46_A           17 EKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLT--PP   94 (291)
T ss_dssp             GGGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECS--SS
T ss_pred             hhHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEcc--CC
Confidence            3568889999999999999998743 22  36999998754   33456789999999999999999999998875  34


Q ss_pred             eEEEEeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccce
Q 005257          437 LMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLAR  516 (705)
Q Consensus       437 ~~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~  516 (705)
                      .++|+||+++++|.+++....  ..+++.++..++.|++.||.|||+   .+++||||||+||+++.++.+||+|||+++
T Consensus        95 ~~~v~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dikp~Nili~~~~~~kl~Dfg~~~  169 (291)
T 1u46_A           95 MKMVTELAPLGSLLDRLRKHQ--GHFLLGTLSRYAVQVAEGMGYLES---KRFIHRDLAARNLLLATRDLVKIGDFGLMR  169 (291)
T ss_dssp             CEEEEECCTTCBHHHHHHHHG--GGSCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEEEETTEEEECCCTTCE
T ss_pred             ceeeEecccCCCHHHHHHhcc--CCcCHHHHHHHHHHHHHHHHHHHh---CCcccCCCchheEEEcCCCCEEEccccccc
Confidence            889999999999999997643  258999999999999999999999   999999999999999999999999999998


Q ss_pred             ecCCCCcce--eeeeeccccCCCccccccCCCCccccEEEEehhHHHHhh-CCCCCCCCCccHHHHHHHHHHhCchhHHH
Q 005257          517 MHGHGQVAS--TTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLS-GRRPIEEGKPNLVEMVWELMVQGKLLDAL  593 (705)
Q Consensus       517 ~~~~~~~~~--~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~Ellt-G~~Pf~~~~~~~~~~v~~~~~~~~~~~~i  593 (705)
                      .........  .....+|..|+|||++.+..++.++||||||+++|||++ |+.||......  +.. ..+.....    
T Consensus       170 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~--~~~-~~~~~~~~----  242 (291)
T 1u46_A          170 ALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGS--QIL-HKIDKEGE----  242 (291)
T ss_dssp             ECCC-CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHH--HHH-HHHHTSCC----
T ss_pred             cccccccchhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccCCHH--HHH-HHHHccCC----
Confidence            775443221  223467889999999988889999999999999999999 99999765421  111 11111100    


Q ss_pred             HHhhhcCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHhccc
Q 005257          594 DARLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLEGKIE  641 (705)
Q Consensus       594 d~~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~  641 (705)
                          .  ...+......+.+++..||+.||++||++.++++.|++..+
T Consensus       243 ----~--~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~  284 (291)
T 1u46_A          243 ----R--LPRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEAQP  284 (291)
T ss_dssp             ----C--CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC-
T ss_pred             ----C--CCCCcCcCHHHHHHHHHHccCCcccCcCHHHHHHHHHHhCc
Confidence                0  11222344678899999999999999999999999987654

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*

Probab=100.00  E-value=1.5e-38  Score=338.34  Aligned_cols=253  Identities=24%  Similarity=0.373  Sum_probs=198.3

Q ss_pred             hCCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCCc--------hhHHHHHHHHHHhccCCCCCcceeeeeeeecc
Q 005257          363 TKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHEND--------GGTRAFLAEISSLGRLKHKSLVGLRGWCKREK  434 (705)
Q Consensus       363 t~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~--------~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~  434 (705)
                      .++|...+.||+|+||.||+|.+..+++.||||++.....        .....+.+|++++++++||||+++++++..  
T Consensus         9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~--   86 (322)
T 2ycf_A            9 RDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDA--   86 (322)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEES--
T ss_pred             hhceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcC--
Confidence            4568889999999999999999999999999999865421        223458899999999999999999998864  


Q ss_pred             CceEEEEeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCC---eeeee
Q 005257          435 GSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMN---GRLGD  511 (705)
Q Consensus       435 ~~~~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~---~kL~D  511 (705)
                      ...++||||+++++|.+++...   ..+++.++..++.|++.||.|||+   .+|+||||||+|||++.++.   +||+|
T Consensus        87 ~~~~lv~e~~~~~~L~~~~~~~---~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~dlkp~NIl~~~~~~~~~~kl~D  160 (322)
T 2ycf_A           87 EDYYIVLELMEGGELFDKVVGN---KRLKEATCKLYFYQMLLAVQYLHE---NGIIHRDLKPENVLLSSQEEDCLIKITD  160 (322)
T ss_dssp             SSEEEEEECCTTEETHHHHSTT---CCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEESSSSSSCCEEECC
T ss_pred             CceEEEEecCCCCcHHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHHH---CCeeccCCCHHHEEEecCCCCCeEEEcc
Confidence            3489999999999999988643   268999999999999999999998   99999999999999987664   99999


Q ss_pred             eccceecCCCCcceeeeeeccccCCCccccc---cCCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCc
Q 005257          512 FGLARMHGHGQVASTTRVVGTVGYLAPEVFS---SGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGK  588 (705)
Q Consensus       512 FGla~~~~~~~~~~~~~~~gt~~y~APE~~~---~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~  588 (705)
                      ||+++.......  .....||+.|+|||++.   ...++.++|||||||++|||++|+.||.......  .+...+..+.
T Consensus       161 fg~~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~--~~~~~~~~~~  236 (322)
T 2ycf_A          161 FGHSKILGETSL--MRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQV--SLKDQITSGK  236 (322)
T ss_dssp             CTTCEECCCCHH--HHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCSS--CHHHHHHHTC
T ss_pred             Cccceecccccc--cccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchHH--HHHHHHHhCc
Confidence            999987654321  22346899999999974   4678999999999999999999999997643210  0111122221


Q ss_pred             hhHHHHHhhhcCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 005257          589 LLDALDARLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKV  635 (705)
Q Consensus       589 ~~~~id~~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  635 (705)
                      ...  .+...  .    .....+.+++..||+.||++||++.+++++
T Consensus       237 ~~~--~~~~~--~----~~~~~~~~li~~~l~~dP~~Rps~~~~l~h  275 (322)
T 2ycf_A          237 YNF--IPEVW--A----EVSEKALDLVKKLLVVDPKARFTTEEALRH  275 (322)
T ss_dssp             CCC--CHHHH--T----TSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred             ccc--Cchhh--h----hcCHHHHHHHHHHcccCHhhCCCHHHHhhC
Confidence            100  00000  1    123568899999999999999999999874

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...

Probab=100.00  E-value=8.9e-39  Score=347.00  Aligned_cols=259  Identities=21%  Similarity=0.290  Sum_probs=187.2

Q ss_pred             hCCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccC--CchhHHHHHHHHHHhccCCCCCcceeeeeeeec-----cC
Q 005257          363 TKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHE--NDGGTRAFLAEISSLGRLKHKSLVGLRGWCKRE-----KG  435 (705)
Q Consensus       363 t~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~--~~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~-----~~  435 (705)
                      .++|...+.||+|+||.||+|.+..+++.||||++...  .....+.+.+|+++++.++||||+++++++...     ..
T Consensus        28 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~  107 (367)
T 2fst_X           28 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFN  107 (367)
T ss_dssp             ETTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCC
T ss_pred             CCceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccCC
Confidence            46889999999999999999999999999999998654  233456789999999999999999999988642     25


Q ss_pred             ceEEEEeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccc
Q 005257          436 SLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLA  515 (705)
Q Consensus       436 ~~~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla  515 (705)
                      ..++|+|++ +++|.+++..    ..+++..+..++.||+.||.|||+   .+|+||||||+|||++.++.+||+|||++
T Consensus       108 ~~~lv~e~~-~~~L~~~~~~----~~l~~~~~~~i~~qi~~aL~~LH~---~givH~Dlkp~NIll~~~~~~kL~DFG~a  179 (367)
T 2fst_X          108 DVYLVTHLM-GADLNNIVKC----QKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLA  179 (367)
T ss_dssp             CCEEEEECC-CEECC---------CCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTCCEEECC----
T ss_pred             eEEEEeccc-CCCHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHH---CCeeeCCCCHhhEEECCCCCEEEeecccc
Confidence            679999999 6899998854    269999999999999999999998   99999999999999999999999999999


Q ss_pred             eecCCCCcceeeeeeccccCCCcccccc-CCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHH-hCchhHH-
Q 005257          516 RMHGHGQVASTTRVVGTVGYLAPEVFSS-GRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMV-QGKLLDA-  592 (705)
Q Consensus       516 ~~~~~~~~~~~~~~~gt~~y~APE~~~~-~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~-~~~~~~~-  592 (705)
                      +.....    ....+||+.|+|||++.+ ..++.++|||||||++|||++|+.||.+...  .+.+..... .|..... 
T Consensus       180 ~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~--~~~l~~i~~~~g~p~~~~  253 (367)
T 2fst_X          180 RHTADE----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH--IDQLKLILRLVGTPGAEL  253 (367)
T ss_dssp             ---------------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSSH--HHHHHHHHHHHCSCCHHH
T ss_pred             cccccc----CCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCCH--HHHHHHHHHHhCCCCHHH
Confidence            865432    334678999999999877 6789999999999999999999999986543  111111111 1111000 


Q ss_pred             -----------HHHhhhcCCCCCH-----HHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 005257          593 -----------LDARLRAKGGFDE-----DEVERVLHLGLLCAYPDPRARPTMRQVVKV  635 (705)
Q Consensus       593 -----------id~~l~~~~~~~~-----~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  635 (705)
                                 ....+........     .....+.+|+.+||+.||++|||+.|++++
T Consensus       254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~L~h  312 (367)
T 2fst_X          254 LKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH  312 (367)
T ss_dssp             HTTCCCHHHHHHHHTSCCCCCCCHHHHTTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred             HHHhhhHHHHHHHhccCCCCCCCHHHHCCCCCHHHHHHHHHhCCCCcccCcCHHHHhcC
Confidence                       0011110011111     113567899999999999999999999874

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A

Probab=100.00  E-value=2e-38  Score=332.76  Aligned_cols=254  Identities=25%  Similarity=0.432  Sum_probs=197.0

Q ss_pred             hCCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCCchhHHHHHHHHHHhccCCCCCcceeeeeeeec---------
Q 005257          363 TKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKRE---------  433 (705)
Q Consensus       363 t~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~---------  433 (705)
                      .++|+..+.||+|+||.||+|.+..+++.||||++.. .....+.+.+|+.++++++||||+++++++...         
T Consensus         5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~-~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~   83 (303)
T 1zy4_A            5 ASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRH-TEEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTA   83 (303)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEE-EHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC----
T ss_pred             cccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEec-cHHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhcc
Confidence            4568889999999999999999998899999999854 334567789999999999999999999987642         


Q ss_pred             ---cCceEEEEeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeee
Q 005257          434 ---KGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLG  510 (705)
Q Consensus       434 ---~~~~~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~  510 (705)
                         ....++||||+++|+|.+++....  ..+++.+++.++.|++.||.|||+   .+++||||||+|||++.++.+||+
T Consensus        84 ~~~~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~~l~~LH~---~~i~H~dlkp~Nil~~~~~~~kl~  158 (303)
T 1zy4_A           84 VKKKSTLFIQMEYCENGTLYDLIHSEN--LNQQRDEYWRLFRQILEALSYIHS---QGIIHRDLKPMNIFIDESRNVKIG  158 (303)
T ss_dssp             --CEEEEEEEEECCCSCBHHHHHHHSC--GGGCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTSCEEEC
T ss_pred             cccCCceEEEEecCCCCCHHHhhhccc--cccchHHHHHHHHHHHHHHHHHHh---CCeecccCCHHhEEEcCCCCEEEe
Confidence               346899999999999999997643  368889999999999999999999   999999999999999999999999


Q ss_pred             eeccceecCCCC-------------cceeeeeeccccCCCccccccC-CCCccccEEEEehhHHHHhhCCCCCCCCCccH
Q 005257          511 DFGLARMHGHGQ-------------VASTTRVVGTVGYLAPEVFSSG-RASTQTDVFGFGILILEVLSGRRPIEEGKPNL  576 (705)
Q Consensus       511 DFGla~~~~~~~-------------~~~~~~~~gt~~y~APE~~~~~-~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~  576 (705)
                      |||+++......             ........||+.|+|||++.+. .++.++|||||||++|||++   ||.....  
T Consensus       159 dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~---p~~~~~~--  233 (303)
T 1zy4_A          159 DFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTGME--  233 (303)
T ss_dssp             CCCCCSCTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS---CCSSHHH--
T ss_pred             eCcchhhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh---ccCCchh--
Confidence            999998654321             1122345789999999999764 68999999999999999998   5543211  


Q ss_pred             HHHHHHHHHhCchhHHHHHhhhcCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 005257          577 VEMVWELMVQGKLLDALDARLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKV  635 (705)
Q Consensus       577 ~~~v~~~~~~~~~~~~id~~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  635 (705)
                      .......+....        ......++......+.+++..||+.||++|||+.+++++
T Consensus       234 ~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h  284 (303)
T 1zy4_A          234 RVNILKKLRSVS--------IEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLNS  284 (303)
T ss_dssp             HHHHHHHHHSTT--------CCCCTTCCTTTSHHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred             HHHHHHhccccc--------cccCccccccchHHHHHHHHHHHhcCcccCcCHHHHhCC
Confidence            111111111110        111122334455678899999999999999999999884

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*

Probab=100.00  E-value=1.8e-38  Score=369.33  Aligned_cols=261  Identities=24%  Similarity=0.352  Sum_probs=209.2

Q ss_pred             HHHhCCCCcceEEeecCceEEEEEEEcC---CCeEEEEEEeccCC-chhHHHHHHHHHHhccCCCCCcceeeeeeeeccC
Q 005257          360 EAATKGFSEENVIGVGGNGKVYKGVLEG---GGAEIAVKRISHEN-DGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKG  435 (705)
Q Consensus       360 ~~at~~f~~~~~LG~G~fg~Vy~~~~~~---~~~~vavK~i~~~~-~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~  435 (705)
                      ....++|...+.||+|+||.||+|.+..   .+..||||++.... ....+.+.+|+.++++++||||+++++++.  ++
T Consensus       386 ~i~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~--~~  463 (656)
T 2j0j_A          386 EIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT--EN  463 (656)
T ss_dssp             BCCGGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC--SS
T ss_pred             ccccccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEe--cC
Confidence            3445678889999999999999999864   34679999987543 334577999999999999999999999884  45


Q ss_pred             ceEEEEeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccc
Q 005257          436 SLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLA  515 (705)
Q Consensus       436 ~~~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla  515 (705)
                      ..++||||+++|+|.+++.....  .+++..++.++.|++.||.|||+   ++|+||||||+|||++.++.+||+|||++
T Consensus       464 ~~~lv~E~~~~g~L~~~l~~~~~--~l~~~~~~~i~~qi~~aL~~LH~---~givHrDikp~NILl~~~~~vkL~DFG~a  538 (656)
T 2j0j_A          464 PVWIIMELCTLGELRSFLQVRKF--SLDLASLILYAYQLSTALAYLES---KRFVHRDIAARNVLVSSNDCVKLGDFGLS  538 (656)
T ss_dssp             SCEEEEECCTTCBHHHHHHHTTT--TCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEEEETTEEEECCCCCC
T ss_pred             ceEEEEEcCCCCcHHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHh---CCccccccchHhEEEeCCCCEEEEecCCC
Confidence            68999999999999999976432  58999999999999999999999   99999999999999999999999999999


Q ss_pred             eecCCCCcceeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhh-CCCCCCCCCccHHHHHHHHHHhCchhHHHH
Q 005257          516 RMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLS-GRRPIEEGKPNLVEMVWELMVQGKLLDALD  594 (705)
Q Consensus       516 ~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~Ellt-G~~Pf~~~~~~~~~~v~~~~~~~~~~~~id  594 (705)
                      +..............+|+.|+|||++.+..++.++|||||||++|||++ |..||......   .+...+..+..     
T Consensus       539 ~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~---~~~~~i~~~~~-----  610 (656)
T 2j0j_A          539 RYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNN---DVIGRIENGER-----  610 (656)
T ss_dssp             CSCCC----------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH---HHHHHHHHTCC-----
T ss_pred             eecCCCcceeccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCCCHH---HHHHHHHcCCC-----
Confidence            8775544333344567889999999998899999999999999999997 99999765431   11122222111     


Q ss_pred             HhhhcCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHhccc
Q 005257          595 ARLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLEGKIE  641 (705)
Q Consensus       595 ~~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~  641 (705)
                            ...+......+.+++..||+.||++|||+.++++.|+...+
T Consensus       611 ------~~~~~~~~~~l~~li~~~l~~dP~~RPs~~el~~~L~~il~  651 (656)
T 2j0j_A          611 ------LPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILE  651 (656)
T ss_dssp             ------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             ------CCCCccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHH
Confidence                  12233445678899999999999999999999999987654

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}

Probab=100.00  E-value=2.3e-38  Score=335.32  Aligned_cols=262  Identities=22%  Similarity=0.304  Sum_probs=197.7

Q ss_pred             hCCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCCchhHHHHHHHHHHhccCCCCCcceeeeeeee----------
Q 005257          363 TKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKR----------  432 (705)
Q Consensus       363 t~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~----------  432 (705)
                      .++|...+.||+|+||.||+|.+..+++.||||++........+.+.+|++++++++||||+++++++..          
T Consensus        10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~   89 (320)
T 2i6l_A           10 GSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVG   89 (320)
T ss_dssp             TTTEEEEEECC-----CEEEEEETTTTEEEEEEEEECCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC---
T ss_pred             CCceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecCChHHHHHHHHHHHHHHhcCCCCeeEEEEeccccccccccccc
Confidence            3578889999999999999999999999999999987766677889999999999999999999998742          


Q ss_pred             ---ccCceEEEEeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEc-cCCCee
Q 005257          433 ---EKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLD-KEMNGR  508 (705)
Q Consensus       433 ---~~~~~~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld-~~~~~k  508 (705)
                         .....++||||++ |+|.+++.+    ..+++..++.++.|++.||.|||+   .+|+||||||+|||++ +++.+|
T Consensus        90 ~~~~~~~~~lv~e~~~-~~L~~~~~~----~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~~k  161 (320)
T 2i6l_A           90 SLTELNSVYIVQEYME-TDLANVLEQ----GPLLEEHARLFMYQLLRGLKYIHS---ANVLHRDLKPANLFINTEDLVLK  161 (320)
T ss_dssp             -CCSCSEEEEEEECCS-EEHHHHHTT----CCCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCSGGGEEEETTTTEEE
T ss_pred             cccccCceeEEeeccC-CCHHHHhhc----CCccHHHHHHHHHHHHHHHHHHHh---CCEecCCCCHHHEEEcCCCCeEE
Confidence               2457899999997 699999853    258999999999999999999998   9999999999999997 567999


Q ss_pred             eeeeccceecCCCCc--ceeeeeeccccCCCcccccc-CCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHH
Q 005257          509 LGDFGLARMHGHGQV--ASTTRVVGTVGYLAPEVFSS-GRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMV  585 (705)
Q Consensus       509 L~DFGla~~~~~~~~--~~~~~~~gt~~y~APE~~~~-~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~  585 (705)
                      |+|||+++.......  .......+|..|+|||.+.+ ..++.++|||||||++|||++|+.||......  +.......
T Consensus       162 l~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~--~~~~~~~~  239 (320)
T 2i6l_A          162 IGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHEL--EQMQLILE  239 (320)
T ss_dssp             ECCCTTCBCC--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHHHHH
T ss_pred             EccCccccccCCCcccccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCCHH--HHHHHHHH
Confidence            999999987643221  11223457899999998865 67899999999999999999999999865431  11111111


Q ss_pred             hCch-------------hHHHHHhhhcCCCCC-----HHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 005257          586 QGKL-------------LDALDARLRAKGGFD-----EDEVERVLHLGLLCAYPDPRARPTMRQVVKV  635 (705)
Q Consensus       586 ~~~~-------------~~~id~~l~~~~~~~-----~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  635 (705)
                      ....             ...+...... ...+     ......+.+++..||+.||++|||+.|++++
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h  306 (320)
T 2i6l_A          240 SIPVVHEEDRQELLSVIPVYIRNDMTE-PHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALSH  306 (320)
T ss_dssp             HSCCCCHHHHHHHHTTSCHHHHHHTTS-CCCCHHHHSTTCCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred             hcCCCchhhhhhhhhcCcccccccccC-CCCChhHhcchhhHHHHHHHHHHcCCCccccCCHHHHhCC
Confidence            1100             0011111110 0001     1124568899999999999999999999874

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*

Probab=100.00  E-value=1.2e-37  Score=339.97  Aligned_cols=268  Identities=19%  Similarity=0.226  Sum_probs=206.7

Q ss_pred             HHHHHHhCCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCCchhHHHHHHHHHHhccCC-CC-----Ccceeeeee
Q 005257          357 QEIEAATKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLK-HK-----SLVGLRGWC  430 (705)
Q Consensus       357 ~el~~at~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~~~~~~~~~Ei~~l~~l~-Hp-----niv~l~g~~  430 (705)
                      +......++|...+.||+|+||+||+|.+..+++.||||+++.. ....+++..|+.++..++ |+     +|+++++++
T Consensus        47 ~~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~  125 (382)
T 2vx3_A           47 KNGEKWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNK-KAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHF  125 (382)
T ss_dssp             CTTCEETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSS-HHHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEE
T ss_pred             ecCCEeeeeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEecc-HHHHHHHHHHHHHHHHHHhcccccceeEEEeeeee
Confidence            33445568899999999999999999999999999999999643 334566788888888885 44     489999988


Q ss_pred             eeccCceEEEEeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEc--cCCCee
Q 005257          431 KREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLD--KEMNGR  508 (705)
Q Consensus       431 ~~~~~~~~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld--~~~~~k  508 (705)
                      .. .+..++||||++ |+|.+++...... .+++..+..++.|++.||.|||. .+.+|+||||||+|||++  .++.+|
T Consensus       126 ~~-~~~~~lv~e~~~-~~L~~~l~~~~~~-~~~~~~~~~i~~qi~~al~~lH~-~~~~ivHrDlkp~NIll~~~~~~~~k  201 (382)
T 2vx3_A          126 MF-RNHLCLVFEMLS-YNLYDLLRNTNFR-GVSLNLTRKFAQQMCTALLFLAT-PELSIIHCDLKPENILLCNPKRSAIK  201 (382)
T ss_dssp             EE-TTEEEEEEECCC-CBHHHHHHHTTTS-CCCHHHHHHHHHHHHHHHHHHTS-TTTCEECCCCSGGGEEESSTTSCCEE
T ss_pred             cc-CCceEEEEecCC-CCHHHHHhhcCcC-CCCHHHHHHHHHHHHHHHHHhcc-CCCCEEcCCCCcccEEEecCCCCcEE
Confidence            76 678999999996 5999999775433 58999999999999999999994 137999999999999995  577899


Q ss_pred             eeeeccceecCCCCcceeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHH-hC
Q 005257          509 LGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMV-QG  587 (705)
Q Consensus       509 L~DFGla~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~-~~  587 (705)
                      |+|||+++.....    .....||+.|+|||++.+..++.++|||||||++|||++|+.||......  +.+..... .+
T Consensus       202 L~DFG~a~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~--~~~~~i~~~~~  275 (382)
T 2vx3_A          202 IVDFGSSCQLGQR----IYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGANEV--DQMNKIVEVLG  275 (382)
T ss_dssp             ECCCTTCEETTCC----CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHHHHHHHC
T ss_pred             EEeccCceecccc----cccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH--HHHHHHHHHhC
Confidence            9999999876533    22357899999999999999999999999999999999999999865431  11111111 11


Q ss_pred             chhHHHHHh---------------------------------------h-----------hcCCCCCHHHHHHHHHHHHH
Q 005257          588 KLLDALDAR---------------------------------------L-----------RAKGGFDEDEVERVLHLGLL  617 (705)
Q Consensus       588 ~~~~~id~~---------------------------------------l-----------~~~~~~~~~~~~~l~~l~~~  617 (705)
                      .....+...                                       +           .........+...+.+++..
T Consensus       276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~  355 (382)
T 2vx3_A          276 IPPAHILDQAPKARKFFEKLPDGTWNLKKTKDGKREYKPPGTRKLHNILGVETGGPGGRRAGESGHTVADYLKFKDLILR  355 (382)
T ss_dssp             SCCHHHHTTCTTHHHHEEECTTSCEEECCCCTTCCCSCCTTCSCHHHHHTTTTTSGGGTTTTCTTCCHHHHHHHHHHHHH
T ss_pred             CCCHHHHHhhHHHHHHHHhccccccccccccccccccCCcchhhHHHHhhccccCCCccccccccccchhhHHHHHHHHH
Confidence            111100000                                       0           00011223445678999999


Q ss_pred             cCCCCCCCCCCHHHHHHH
Q 005257          618 CAYPDPRARPTMRQVVKV  635 (705)
Q Consensus       618 Cl~~dP~~RPs~~evl~~  635 (705)
                      ||+.||++|||+.|++++
T Consensus       356 mL~~dP~~Rpta~e~L~h  373 (382)
T 2vx3_A          356 MLDYDPKTRIQPYYALQH  373 (382)
T ss_dssp             HTCSCTTTSCCHHHHTTS
T ss_pred             hcCCChhhCCCHHHHhcC
Confidence            999999999999999874

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*

Probab=100.00  E-value=1.9e-38  Score=340.85  Aligned_cols=262  Identities=20%  Similarity=0.270  Sum_probs=205.0

Q ss_pred             hCCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCCchh-----------------HHHHHHHHHHhccCCCCCcce
Q 005257          363 TKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGG-----------------TRAFLAEISSLGRLKHKSLVG  425 (705)
Q Consensus       363 t~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~~~-----------------~~~~~~Ei~~l~~l~Hpniv~  425 (705)
                      .++|...+.||+|+||.||+|.+  +++.||||++.......                 .+.+.+|+.++.+++||||++
T Consensus        30 ~~~y~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~  107 (348)
T 2pml_X           30 INDYRIIRTLNQGKFNKIILCEK--DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLT  107 (348)
T ss_dssp             ETTEEEEEEEECCSSCCEEEEEE--TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCC
T ss_pred             cCceEEEEEEcCCCCeEEEEEEc--CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcce
Confidence            46899999999999999999999  68999999986542111                 178999999999999999999


Q ss_pred             eeeeeeeccCceEEEEeeCCCCChhHH------HHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCe
Q 005257          426 LRGWCKREKGSLMLVYDYMENGSLDKW------IFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNV  499 (705)
Q Consensus       426 l~g~~~~~~~~~~lV~E~~~~gsL~~~------L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NI  499 (705)
                      +++++.. .+..++||||+++|+|.++      +.... ...+++..++.++.|++.||.|||+  ..+++||||||+||
T Consensus       108 ~~~~~~~-~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~-~~~~~~~~~~~i~~qi~~~l~~lH~--~~~i~H~dl~p~Ni  183 (348)
T 2pml_X          108 CEGIITN-YDEVYIIYEYMENDSILKFDEYFFVLDKNY-TCFIPIQVIKCIIKSVLNSFSYIHN--EKNICHRDVKPSNI  183 (348)
T ss_dssp             CSEEEES-SSEEEEEEECCTTCBSSEESSSEESSCSSS-CCCCCHHHHHHHHHHHHHHHHHHHH--TSCEECCCCCGGGE
T ss_pred             EEEEEee-CCeEEEEEeccCCCcHHHHHHHhhhhhhcc-ccCCCHHHHHHHHHHHHHHHHHHhc--cCCEeecCCChHhE
Confidence            9999876 6789999999999999998      54321 3479999999999999999999996  38999999999999


Q ss_pred             EEccCCCeeeeeeccceecCCCCcceeeeeeccccCCCccccccC-CCCc-cccEEEEehhHHHHhhCCCCCCCCCccHH
Q 005257          500 LLDKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSG-RAST-QTDVFGFGILILEVLSGRRPIEEGKPNLV  577 (705)
Q Consensus       500 Lld~~~~~kL~DFGla~~~~~~~~~~~~~~~gt~~y~APE~~~~~-~~s~-ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~  577 (705)
                      +++.++.+||+|||+++.....   ......||+.|+|||++.+. .++. ++|||||||++|||++|+.||......  
T Consensus       184 l~~~~~~~kl~dfg~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~--  258 (348)
T 2pml_X          184 LMDKNGRVKLSDFGESEYMVDK---KIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISL--  258 (348)
T ss_dssp             EECTTSCEEECCCTTCEECBTT---EECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCSSCS--
T ss_pred             EEcCCCcEEEeccccccccccc---cccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCcH--
Confidence            9999999999999999876543   23345789999999999877 5666 999999999999999999999865431  


Q ss_pred             HHHHHHHHhCchhHHHHH-----hhhc--CCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 005257          578 EMVWELMVQGKLLDALDA-----RLRA--KGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKV  635 (705)
Q Consensus       578 ~~v~~~~~~~~~~~~id~-----~l~~--~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  635 (705)
                      ......+..+......+.     ....  ...........+.+++..||+.||++|||+.|++++
T Consensus       259 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~l~h  323 (348)
T 2pml_X          259 VELFNNIRTKNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALKH  323 (348)
T ss_dssp             HHHHHHHTSCCCCCCCSSSSSTTTTCC--------CCCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred             HHHHHHHhccCcCCccchhhhhccccccccccchhhcCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence            112222322221100000     0000  000002234678899999999999999999999884

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}

Probab=100.00  E-value=3.1e-38  Score=346.07  Aligned_cols=260  Identities=20%  Similarity=0.251  Sum_probs=194.8

Q ss_pred             CCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCCchhHHHHHHHHHHhccCCCCCcceeeeeeeeccC-----ceE
Q 005257          364 KGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKG-----SLM  438 (705)
Q Consensus       364 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~-----~~~  438 (705)
                      .+|...+.||+|+||.||+|.+..+++ ||+|++......    ..+|+++++.++||||+++++++.....     .++
T Consensus        40 ~~Y~~~~~lG~G~~g~V~~a~~~~~~~-~aikk~~~~~~~----~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~~~  114 (394)
T 4e7w_A           40 IAYTNCKVIGNGSFGVVFQAKLVESDE-VAIKKVLQDKRF----KNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLN  114 (394)
T ss_dssp             EEEEEEEEEEEETTEEEEEEEETTTEE-EEEEEEECCTTS----CCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEEEE
T ss_pred             ceEEEeEEEeeCCCeEEEEEEECCCCe-EEEEEEecCcch----HHHHHHHHHhCCCCCcceEEEEEEecCCCCCceEEE
Confidence            468889999999999999999987655 899988644322    2369999999999999999999865332     278


Q ss_pred             EEEeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEc-cCCCeeeeeecccee
Q 005257          439 LVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLD-KEMNGRLGDFGLARM  517 (705)
Q Consensus       439 lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld-~~~~~kL~DFGla~~  517 (705)
                      +||||++++.+............+++..+..++.||+.||.|||+   .+|+||||||+|||++ .++.+||+|||+++.
T Consensus       115 lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~---~~ivHrDlkp~Nill~~~~~~~kL~DFG~a~~  191 (394)
T 4e7w_A          115 LVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHS---IGICHRDIKPQNLLLDPPSGVLKLIDFGSAKI  191 (394)
T ss_dssp             EEEECCSEEHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEETTTTEEEECCCTTCEE
T ss_pred             EEeeccCccHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHH---CCccCCCCCHHHEEEcCCCCcEEEeeCCCccc
Confidence            999999875444433322223479999999999999999999999   9999999999999999 799999999999987


Q ss_pred             cCCCCcceeeeeeccccCCCccccccC-CCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHH-hCc-hhHHHH
Q 005257          518 HGHGQVASTTRVVGTVGYLAPEVFSSG-RASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMV-QGK-LLDALD  594 (705)
Q Consensus       518 ~~~~~~~~~~~~~gt~~y~APE~~~~~-~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~-~~~-~~~~id  594 (705)
                      ......  .....||+.|+|||++.+. .++.++|||||||++|||++|+.||......  +.....+. .|. ..+.+.
T Consensus       192 ~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~--~~l~~i~~~~g~p~~~~~~  267 (394)
T 4e7w_A          192 LIAGEP--NVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGI--DQLVEIIKVLGTPSREQIK  267 (394)
T ss_dssp             CCTTCC--CCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHHHHHHHCCCCHHHHH
T ss_pred             ccCCCC--CcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH--HHHHHHHHHhCCCCHHHHH
Confidence            654432  2235789999999998764 5899999999999999999999999875431  22211111 011 111111


Q ss_pred             ---Hhhhc-----CCC------CCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 005257          595 ---ARLRA-----KGG------FDEDEVERVLHLGLLCAYPDPRARPTMRQVVKV  635 (705)
Q Consensus       595 ---~~l~~-----~~~------~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  635 (705)
                         +....     ...      +.......+.+++..||+.||++|||+.|++++
T Consensus       268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h  322 (394)
T 4e7w_A          268 TMNPNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCH  322 (394)
T ss_dssp             HHCGGGSSSCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred             hhChhhhhhccccccCCcHHHhccccCCHHHHHHHHHHhCCChhhCCCHHHHhcC
Confidence               10000     000      111133578899999999999999999999885

>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A

Probab=100.00  E-value=5.9e-38  Score=340.99  Aligned_cols=258  Identities=22%  Similarity=0.300  Sum_probs=198.4

Q ss_pred             hCCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCC--chhHHHHHHHHHHhccCCCCCcceeeeeeeeccC-----
Q 005257          363 TKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHEN--DGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKG-----  435 (705)
Q Consensus       363 t~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~--~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~-----  435 (705)
                      .++|...+.||+|+||.||+|.+..+++.||||++....  ....+.+.+|+.+++.++||||+++++++.....     
T Consensus        41 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~  120 (371)
T 4exu_A           41 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFY  120 (371)
T ss_dssp             ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTCC
T ss_pred             cccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCcccce
Confidence            467889999999999999999999999999999997643  3345778999999999999999999999875332     


Q ss_pred             ceEEEEeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccc
Q 005257          436 SLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLA  515 (705)
Q Consensus       436 ~~~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla  515 (705)
                      ..++||||+. ++|.+++..     .+++.++..++.|++.||.|||+   .+|+||||||+|||++.++.+||+|||++
T Consensus       121 ~~~lv~e~~~-~~l~~~~~~-----~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dikp~NIll~~~~~~kL~Dfg~a  191 (371)
T 4exu_A          121 DFYLVMPFMQ-TDLQKIMGM-----EFSEEKIQYLVYQMLKGLKYIHS---AGVVHRDLKPGNLAVNEDCELKILDFGLA  191 (371)
T ss_dssp             CCEEEEECCC-EEHHHHTTS-----CCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTCCEEECSTTCC
T ss_pred             eEEEEEcccc-ccHHHHhhc-----CCCHHHHHHHHHHHHHHHHHHHH---CCCcCCCcCHHHeEECCCCCEEEEecCcc
Confidence            2399999997 688887732     58999999999999999999999   99999999999999999999999999999


Q ss_pred             eecCCCCcceeeeeeccccCCCcccccc-CCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHH-hCchhH--
Q 005257          516 RMHGHGQVASTTRVVGTVGYLAPEVFSS-GRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMV-QGKLLD--  591 (705)
Q Consensus       516 ~~~~~~~~~~~~~~~gt~~y~APE~~~~-~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~-~~~~~~--  591 (705)
                      +.....    .....||+.|+|||++.+ ..++.++|||||||++|||++|+.||.....  .+....... .+....  
T Consensus       192 ~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~--~~~~~~i~~~~~~~~~~~  265 (371)
T 4exu_A          192 RHADAE----MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDY--LDQLTQILKVTGVPGTEF  265 (371)
T ss_dssp             ------------CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSH--HHHHHHHHHHHCCCCHHH
T ss_pred             cccccC----cCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCh--HHHHHHHHHHhCCCcHHH
Confidence            865432    233578999999999877 6789999999999999999999999986542  122211111 011000  


Q ss_pred             ----------HHHHhhhcCCCCC-----HHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 005257          592 ----------ALDARLRAKGGFD-----EDEVERVLHLGLLCAYPDPRARPTMRQVVKV  635 (705)
Q Consensus       592 ----------~id~~l~~~~~~~-----~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  635 (705)
                                .....+.......     ......+.+++..||+.||++|||+.|++++
T Consensus       266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h  324 (371)
T 4exu_A          266 VQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTH  324 (371)
T ss_dssp             HTTCSCHHHHHHHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred             HHHhhhhhhhhhhhccCCCcchhHHHhccccChHHHHHHHHHCCCChhhcCCHHHHhcC
Confidence                      0001111000000     1124578899999999999999999999874

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A

Probab=100.00  E-value=9.7e-38  Score=338.43  Aligned_cols=263  Identities=21%  Similarity=0.271  Sum_probs=205.4

Q ss_pred             hCCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCCchhHHHHHHHHHHhccCC-----------CCCcceeeeeee
Q 005257          363 TKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLK-----------HKSLVGLRGWCK  431 (705)
Q Consensus       363 t~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~~~~~~~~~Ei~~l~~l~-----------Hpniv~l~g~~~  431 (705)
                      .++|...+.||+|+||+||+|.+..+++.||||++... ....+.+.+|++++.+++           ||||+++++++.
T Consensus        18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~   96 (373)
T 1q8y_A           18 DARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGD-KVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFN   96 (373)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEE
T ss_pred             CCeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCC-ccchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHhh
Confidence            35789999999999999999999989999999998643 334567889999999886           899999999887


Q ss_pred             ecc---CceEEEEeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCC-CeeecCCCCCCeEEc-----
Q 005257          432 REK---GSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEK-KVLHRDIKSSNVLLD-----  502 (705)
Q Consensus       432 ~~~---~~~~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~-~iiHrDLkp~NILld-----  502 (705)
                      ...   ..+++||||+ +++|.+++...... .+++..+..++.||+.||.|||+   + +|+||||||+|||++     
T Consensus        97 ~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~-~~~~~~~~~i~~qi~~aL~~lH~---~~~ivH~Dikp~NIll~~~~~~  171 (373)
T 1q8y_A           97 HKGPNGVHVVMVFEVL-GENLLALIKKYEHR-GIPLIYVKQISKQLLLGLDYMHR---RCGIIHTDIKPENVLMEIVDSP  171 (373)
T ss_dssp             EEETTEEEEEEEECCC-CEEHHHHHHHTTTS-CCCHHHHHHHHHHHHHHHHHHHH---TTCEECSCCSGGGEEEEEEETT
T ss_pred             ccCCCCceEEEEEecC-CCCHHHHHHHhhcc-CCcHHHHHHHHHHHHHHHHHHHh---cCCEEecCCChHHeEEeccCCC
Confidence            532   2689999999 88999999775433 58999999999999999999998   7 999999999999995     


Q ss_pred             -cCCCeeeeeeccceecCCCCcceeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhhCCCCCCCCCcc----HH
Q 005257          503 -KEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPN----LV  577 (705)
Q Consensus       503 -~~~~~kL~DFGla~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~----~~  577 (705)
                       ..+.+||+|||+++.....    .....||+.|+|||++.+..++.++|||||||++|||++|+.||......    ..
T Consensus       172 ~~~~~~kl~Dfg~a~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~  247 (373)
T 1q8y_A          172 ENLIQIKIADLGNACWYDEH----YTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDD  247 (373)
T ss_dssp             TTEEEEEECCCTTCEETTBC----CCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CHH
T ss_pred             cCcceEEEcccccccccCCC----CCCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCCCCCCcccccCChH
Confidence             3447999999999876532    22347899999999999989999999999999999999999999754321    11


Q ss_pred             HHHHHHH-HhCchhHHH----------------------------HHhhhcCCCCCHHHHHHHHHHHHHcCCCCCCCCCC
Q 005257          578 EMVWELM-VQGKLLDAL----------------------------DARLRAKGGFDEDEVERVLHLGLLCAYPDPRARPT  628 (705)
Q Consensus       578 ~~v~~~~-~~~~~~~~i----------------------------d~~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs  628 (705)
                      +.+.... ..+.....+                            ...+.....++......+.+++..||+.||++|||
T Consensus       248 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt  327 (373)
T 1q8y_A          248 DHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRAD  327 (373)
T ss_dssp             HHHHHHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBC
T ss_pred             HHHHHHHHhcCCCCHHHHhccchhhhhcCCcchhcccccccccchhhhhhhcccCCcchHHHHHHHHHHHhccCccccCC
Confidence            1111111 011111110                            11112223456778889999999999999999999


Q ss_pred             HHHHHHH
Q 005257          629 MRQVVKV  635 (705)
Q Consensus       629 ~~evl~~  635 (705)
                      +.|++++
T Consensus       328 ~~ell~h  334 (373)
T 1q8y_A          328 AGGLVNH  334 (373)
T ss_dssp             HHHHHTC
T ss_pred             HHHHhhC
Confidence            9999874

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*

Probab=100.00  E-value=4.8e-38  Score=338.39  Aligned_cols=265  Identities=22%  Similarity=0.281  Sum_probs=202.2

Q ss_pred             hCCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCCc-hhHHHHHHHHHHhccCCCCCcceeeeeeeec----cCce
Q 005257          363 TKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHEND-GGTRAFLAEISSLGRLKHKSLVGLRGWCKRE----KGSL  437 (705)
Q Consensus       363 t~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~-~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~----~~~~  437 (705)
                      .++|...+.||+|+||.||+|.+..+++.||||++..... .....+.+|++++++++||||+++++++...    ....
T Consensus        10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~   89 (353)
T 2b9h_A           10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNEV   89 (353)
T ss_dssp             CTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCCCE
T ss_pred             ccceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeecccccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccceE
Confidence            5688999999999999999999998999999999965433 3456788999999999999999999987643    2678


Q ss_pred             EEEEeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeecccee
Q 005257          438 MLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARM  517 (705)
Q Consensus       438 ~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~  517 (705)
                      ++||||++ |+|.+++...    .+++.++..++.|++.||.|||+   .+|+||||||+|||++.++.+||+|||+++.
T Consensus        90 ~lv~e~~~-~~L~~~~~~~----~~~~~~~~~~~~qi~~~L~~LH~---~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~  161 (353)
T 2b9h_A           90 YIIQELMQ-TDLHRVISTQ----MLSDDHIQYFIYQTLRAVKVLHG---SNVIHRDLKPSNLLINSNCDLKVCDFGLARI  161 (353)
T ss_dssp             EEEECCCS-EEHHHHHHHC----CCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEECTTCCEEECCCTTCEE
T ss_pred             EEEEeccC-ccHHHHHhhc----CCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHeEEcCCCcEEEEecccccc
Confidence            99999997 6999988652    58999999999999999999998   9999999999999999999999999999987


Q ss_pred             cCCCCcc---------eeeeeeccccCCCcccccc-CCCCccccEEEEehhHHHHhhCCCCCCCCCccH-HHHHHHHHHh
Q 005257          518 HGHGQVA---------STTRVVGTVGYLAPEVFSS-GRASTQTDVFGFGILILEVLSGRRPIEEGKPNL-VEMVWELMVQ  586 (705)
Q Consensus       518 ~~~~~~~---------~~~~~~gt~~y~APE~~~~-~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~-~~~v~~~~~~  586 (705)
                      .......         ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||....... ...+......
T Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~  241 (353)
T 2b9h_A          162 IDESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGT  241 (353)
T ss_dssp             CC----------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCC
T ss_pred             cccccccccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCC
Confidence            6533211         1223578999999998754 678999999999999999999999998654211 1111111100


Q ss_pred             Cc---------h--hHHHHHhhhcCCCCC-----HHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 005257          587 GK---------L--LDALDARLRAKGGFD-----EDEVERVLHLGLLCAYPDPRARPTMRQVVKV  635 (705)
Q Consensus       587 ~~---------~--~~~id~~l~~~~~~~-----~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  635 (705)
                      ..         .  .......+.......     ......+.+++..||+.||++|||+.|++++
T Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h  306 (353)
T 2b9h_A          242 PHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEH  306 (353)
T ss_dssp             CCSTTTTTTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred             CchhccccccccchhhHHhhcccCCCCcchhhhcccCCHHHHHHHHHhcCcCcccCCCHHHHhcC
Confidence            00         0  000000000000000     1223567899999999999999999999874

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*

Probab=100.00  E-value=1.9e-37  Score=333.16  Aligned_cols=261  Identities=21%  Similarity=0.269  Sum_probs=203.0

Q ss_pred             hCCCCcceEEeecCceEEEEEEEcCCC-eEEEEEEeccCCchhHHHHHHHHHHhccCCCCC------cceeeeeeeeccC
Q 005257          363 TKGFSEENVIGVGGNGKVYKGVLEGGG-AEIAVKRISHENDGGTRAFLAEISSLGRLKHKS------LVGLRGWCKREKG  435 (705)
Q Consensus       363 t~~f~~~~~LG~G~fg~Vy~~~~~~~~-~~vavK~i~~~~~~~~~~~~~Ei~~l~~l~Hpn------iv~l~g~~~~~~~  435 (705)
                      .++|...+.||+|+||.||+|.+..++ +.||||+++.. ....+.+.+|+.++++++|++      ++.+.+++.. .+
T Consensus        18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~-~~   95 (355)
T 2eu9_A           18 QERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNV-GKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNF-HG   95 (355)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEE-TT
T ss_pred             cccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEccc-ccchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeee-CC
Confidence            468999999999999999999997666 78999998643 344567889999999998766      8888887776 67


Q ss_pred             ceEEEEeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEE--------------
Q 005257          436 SLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLL--------------  501 (705)
Q Consensus       436 ~~~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILl--------------  501 (705)
                      ..++||||+ +++|.+++...... .+++.+++.++.||+.||.|||+   .+|+||||||+|||+              
T Consensus        96 ~~~lv~e~~-~~~l~~~l~~~~~~-~~~~~~~~~i~~qi~~~L~~lH~---~~ivH~Dlkp~NIll~~~~~~~~~~~~~~  170 (355)
T 2eu9_A           96 HMCIAFELL-GKNTFEFLKENNFQ-PYPLPHVRHMAYQLCHALRFLHE---NQLTHTDLKPENILFVNSEFETLYNEHKS  170 (355)
T ss_dssp             EEEEEEECC-CCBHHHHHHHTTTC-CCCHHHHHHHHHHHHHHHHHHHT---TTEECCCCCGGGEEESCCCEEEEECCC-C
T ss_pred             eEEEEEecc-CCChHHHHHhccCC-CCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEEeccccccccccccc
Confidence            899999999 66777777664432 69999999999999999999998   999999999999999              


Q ss_pred             -----ccCCCeeeeeeccceecCCCCcceeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhhCCCCCCCCCccH
Q 005257          502 -----DKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNL  576 (705)
Q Consensus       502 -----d~~~~~kL~DFGla~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~  576 (705)
                           +.++.+||+|||+++......    ....||+.|+|||++.+..++.++|||||||++|||++|+.||.......
T Consensus       171 ~~~~~~~~~~~kl~Dfg~~~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~  246 (355)
T 2eu9_A          171 CEEKSVKNTSIRVADFGSATFDHEHH----TTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENRE  246 (355)
T ss_dssp             CCEEEESCCCEEECCCTTCEETTSCC----CSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH
T ss_pred             ccccccCCCcEEEeecCccccccccc----cCCcCCCcccCCeeeecCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHH
Confidence                 667899999999998754322    23578999999999999999999999999999999999999998654321


Q ss_pred             HHHHHHHHHhCchhHHHHHhh------------------------------hcCCCCCHHHHHHHHHHHHHcCCCCCCCC
Q 005257          577 VEMVWELMVQGKLLDALDARL------------------------------RAKGGFDEDEVERVLHLGLLCAYPDPRAR  626 (705)
Q Consensus       577 ~~~v~~~~~~~~~~~~id~~l------------------------------~~~~~~~~~~~~~l~~l~~~Cl~~dP~~R  626 (705)
                      ........ .+.....+....                              .........+...+.+++..||+.||++|
T Consensus       247 ~~~~~~~~-~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R  325 (355)
T 2eu9_A          247 HLVMMEKI-LGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPAQR  325 (355)
T ss_dssp             HHHHHHHH-HCCCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTS
T ss_pred             HHHHHHHH-cCCCcHHHhhhccchhhhcccccccccccchhccccccCCcccccccccchhHHHHHHHHHHHhcCChhhC
Confidence            11111111 111111111000                              00011223445678999999999999999


Q ss_pred             CCHHHHHHH
Q 005257          627 PTMRQVVKV  635 (705)
Q Consensus       627 Ps~~evl~~  635 (705)
                      ||+.|++++
T Consensus       326 pt~~e~l~h  334 (355)
T 2eu9_A          326 ITLAEALLH  334 (355)
T ss_dssp             CCHHHHTTS
T ss_pred             cCHHHHhcC
Confidence            999999863

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*

Probab=100.00  E-value=8.5e-38  Score=326.88  Aligned_cols=253  Identities=25%  Similarity=0.340  Sum_probs=205.1

Q ss_pred             HhCCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccC--CchhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEE
Q 005257          362 ATKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHE--NDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLML  439 (705)
Q Consensus       362 at~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~--~~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~l  439 (705)
                      ..++|...+.||+|+||.||+|.+..+++.||||++...  .....+.+.+|++++++++||||+++++++.. .+..++
T Consensus        20 ~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~l   98 (287)
T 2wei_A           20 FAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILED-SSSFYI   98 (287)
T ss_dssp             HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEEC-SSEEEE
T ss_pred             HhhcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeC-CCeEEE
Confidence            346789999999999999999999988999999998654  23456789999999999999999999999876 678999


Q ss_pred             EEeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccC---CCeeeeeeccce
Q 005257          440 VYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKE---MNGRLGDFGLAR  516 (705)
Q Consensus       440 V~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~---~~~kL~DFGla~  516 (705)
                      ||||+++++|.+++....   .+++.+++.++.|++.||.|||+   .+++||||||+||+++.+   +.+||+|||++.
T Consensus        99 v~e~~~~~~L~~~l~~~~---~~~~~~~~~i~~qi~~~l~~LH~---~~i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~~  172 (287)
T 2wei_A           99 VGELYTGGELFDEIIKRK---RFSEHDAARIIKQVFSGITYMHK---HNIVHRDLKPENILLESKEKDCDIKIIDFGLST  172 (287)
T ss_dssp             EECCCCSCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEESCSSTTCCEEECSTTGGG
T ss_pred             EEEccCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHH---CCeeccCCChhhEEEecCCCcccEEEeccCcce
Confidence            999999999999887643   58999999999999999999998   999999999999999764   469999999998


Q ss_pred             ecCCCCcceeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhHHHHHh
Q 005257          517 MHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDAR  596 (705)
Q Consensus       517 ~~~~~~~~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~  596 (705)
                      .......  .....||+.|+|||.+.+ .++.++||||||+++|||++|+.||......   .+...+..+.....    
T Consensus       173 ~~~~~~~--~~~~~~~~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~---~~~~~~~~~~~~~~----  242 (287)
T 2wei_A          173 CFQQNTK--MKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEY---DILKRVETGKYAFD----  242 (287)
T ss_dssp             TBCCCSS--CSCHHHHHTTCCHHHHTT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH---HHHHHHHHCCCCCC----
T ss_pred             eecCCCc--cccccCcccccChHHhcC-CCCCchhhHhHHHHHHHHHhCCCCCCCCCHH---HHHHHHHcCCCCCC----
Confidence            6654332  223468999999999875 5899999999999999999999999765421   12222222221100    


Q ss_pred             hhcCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 005257          597 LRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKV  635 (705)
Q Consensus       597 l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  635 (705)
                      ...    .......+.+++..||+.||++|||+.|+++.
T Consensus       243 ~~~----~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h  277 (287)
T 2wei_A          243 LPQ----WRTISDDAKDLIRKMLTFHPSLRITATQCLEH  277 (287)
T ss_dssp             SGG----GTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred             chh----hhhcCHHHHHHHHHHcccChhhCcCHHHHhcC
Confidence            000    01223568899999999999999999999873

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*

Probab=100.00  E-value=1.1e-38  Score=346.53  Aligned_cols=256  Identities=14%  Similarity=0.053  Sum_probs=183.2

Q ss_pred             hCCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCCc---hhHHHHHHHHHHhccC--CCCCcceee-------eee
Q 005257          363 TKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHEND---GGTRAFLAEISSLGRL--KHKSLVGLR-------GWC  430 (705)
Q Consensus       363 t~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~---~~~~~~~~Ei~~l~~l--~Hpniv~l~-------g~~  430 (705)
                      ..+|...+.||+|+||.||+|.+..+++.||||++.....   ...+.+.+|+.++..|  +||||++++       +++
T Consensus        61 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~hp~iv~~~~~~~~p~d~~  140 (371)
T 3q60_A           61 ERKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRRRLLLPSDAV  140 (371)
T ss_dssp             EEEEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC----------CBCCCCEEE
T ss_pred             ceeeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcccChhhhhhceeEEeeehhe
Confidence            3458889999999999999999998999999999987543   3345677785444444  699988744       333


Q ss_pred             eecc----------------CceEEEEeeCCCCChhHHHHhcCCCCcccHHHH------HHHHHHHHHHHHHHhcCCCCC
Q 005257          431 KREK----------------GSLMLVYDYMENGSLDKWIFQCDGSMMLSCEER------IRVLKDVAAGVLYLHEGWEKK  488 (705)
Q Consensus       431 ~~~~----------------~~~~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~------~~i~~qia~gL~yLH~~~~~~  488 (705)
                      ...+                ..+++||||++ |+|.+++...+.  .+.+..+      ..++.||+.||+|||+   ++
T Consensus       141 ~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~--~~~~~~~~~~~vk~~i~~qi~~aL~~LH~---~~  214 (371)
T 3q60_A          141 AVQSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLDF--VYVFRGDEGILALHILTAQLIRLAANLQS---KG  214 (371)
T ss_dssp             EETTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHHHH--SCCCCHHHHHHHHHHHHHHHHHHHHHHHH---TT
T ss_pred             ecCCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHhcc--ccchhhhhhhhhHHHHHHHHHHHHHHHHH---CC
Confidence            3211                33799999998 899999986432  3455555      7888999999999998   99


Q ss_pred             eeecCCCCCCeEEccCCCeeeeeeccceecCCCCcceeeeeeccccCCCcccccc--CCCCccccEEEEehhHHHHhhCC
Q 005257          489 VLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSS--GRASTQTDVFGFGILILEVLSGR  566 (705)
Q Consensus       489 iiHrDLkp~NILld~~~~~kL~DFGla~~~~~~~~~~~~~~~gt~~y~APE~~~~--~~~s~ksDVwS~Gvvl~ElltG~  566 (705)
                      |+||||||+|||++.++.+||+|||+++.....    .....+|+.|+|||++.+  ..++.++|||||||++|||++|+
T Consensus       215 ivHrDikp~NIll~~~~~~kL~DFG~a~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~elltg~  290 (371)
T 3q60_A          215 LVHGHFTPDNLFIMPDGRLMLGDVSALWKVGTR----GPASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLF  290 (371)
T ss_dssp             EEETTCSGGGEEECTTSCEEECCGGGEEETTCE----EEGGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHHSS
T ss_pred             CccCcCCHHHEEECCCCCEEEEecceeeecCCC----ccCccCCcCCcChhhccCCCCCcCccccHHHHHHHHHHHHhCC
Confidence            999999999999999999999999999876432    113467799999999987  67999999999999999999999


Q ss_pred             CCCCCCCccHHHHHHHHHHhCchhHHHHHhhhcCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHH
Q 005257          567 RPIEEGKPNLVEMVWELMVQGKLLDALDARLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVK  634 (705)
Q Consensus       567 ~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~  634 (705)
                      .||.........    .+..............  ..........+.+++..||+.||++|||+.++++
T Consensus       291 ~Pf~~~~~~~~~----~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~  352 (371)
T 3q60_A          291 LPFGLVTPGIKG----SWKRPSLRVPGTDSLA--FGSCTPLPDFVKTLIGRFLNFDRRRRLLPLEAME  352 (371)
T ss_dssp             CSTTBCCTTCTT----CCCBCCTTSCCCCSCC--CTTSSCCCHHHHHHHHHHTCSSTTTCCCHHHHTT
T ss_pred             CCCCCcCccccc----chhhhhhhhccccccc--hhhccCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence            999765321000    0000000000000000  0111233467889999999999999999999876

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B

Probab=100.00  E-value=3.8e-38  Score=335.21  Aligned_cols=266  Identities=24%  Similarity=0.352  Sum_probs=202.7

Q ss_pred             HHhCCCCcceEEeecCceEEEEEEEc-CCCeEEEEEEeccCC--chhHHHHHHHHHHhccC---CCCCcceeeeeeee--
Q 005257          361 AATKGFSEENVIGVGGNGKVYKGVLE-GGGAEIAVKRISHEN--DGGTRAFLAEISSLGRL---KHKSLVGLRGWCKR--  432 (705)
Q Consensus       361 ~at~~f~~~~~LG~G~fg~Vy~~~~~-~~~~~vavK~i~~~~--~~~~~~~~~Ei~~l~~l---~Hpniv~l~g~~~~--  432 (705)
                      .+.++|...+.||+|+||.||+|.+. .+++.||||++....  ......+.+|+.+++.+   +||||++++++|..  
T Consensus         8 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~   87 (326)
T 1blx_A            8 RADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSR   87 (326)
T ss_dssp             CGGGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEE
T ss_pred             CchhceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeecc
Confidence            34578999999999999999999995 678999999986432  22234566777777666   89999999998862  


Q ss_pred             --ccCceEEEEeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeee
Q 005257          433 --EKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLG  510 (705)
Q Consensus       433 --~~~~~~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~  510 (705)
                        .....++||||++ |+|.+++...... .+++.++..++.|++.||.|||+   .+|+||||||+|||++.++.+||+
T Consensus        88 ~~~~~~~~lv~e~~~-~~L~~~l~~~~~~-~~~~~~~~~~~~qi~~~l~~lH~---~gi~H~dlkp~Nili~~~~~~kl~  162 (326)
T 1blx_A           88 TDRETKLTLVFEHVD-QDLTTYLDKVPEP-GVPTETIKDMMFQLLRGLDFLHS---HRVVHRDLKPQNILVTSSGQIKLA  162 (326)
T ss_dssp             CSSEEEEEEEEECCS-CBHHHHHHHSCTT-CSCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTCCEEEC
T ss_pred             cCCCceEEEEEecCC-CCHHHHHHhcccC-CCCHHHHHHHHHHHHHHHHHHHH---CCceeccCCHHHeEEcCCCCEEEe
Confidence              3457899999998 6999999775433 58999999999999999999999   999999999999999999999999


Q ss_pred             eeccceecCCCCcceeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHh-Cch
Q 005257          511 DFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQ-GKL  589 (705)
Q Consensus       511 DFGla~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~-~~~  589 (705)
                      |||+++......  ......||+.|+|||++.+..++.++|||||||++|||++|+.||......  +........ +..
T Consensus       163 Dfg~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~--~~~~~i~~~~~~~  238 (326)
T 1blx_A          163 DFGLARIYSFQM--ALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDV--DQLGKILDVIGLP  238 (326)
T ss_dssp             SCCSCCCCCGGG--GGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH--HHHHHHHHHHCCC
T ss_pred             cCcccccccCCC--CccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHH--HHHHHHHHHcCCC
Confidence            999998654322  223357899999999999889999999999999999999999999865431  111111110 000


Q ss_pred             h-HHH-------HHhhhc-----CCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 005257          590 L-DAL-------DARLRA-----KGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKV  635 (705)
Q Consensus       590 ~-~~i-------d~~l~~-----~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  635 (705)
                      . ...       ......     ...+.......+.+++..||+.||++||++.|++++
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h  297 (326)
T 1blx_A          239 GEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSH  297 (326)
T ss_dssp             CGGGSCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred             CcccCccccccchhhhcccCcchhhhccccCCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence            0 000       000000     000112234567899999999999999999999863

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}

Probab=100.00  E-value=1.1e-38  Score=338.41  Aligned_cols=262  Identities=24%  Similarity=0.366  Sum_probs=202.2

Q ss_pred             HHHHHHhCCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCC--chhHHHHHHHHHHhccCCCCCcceeeeeeeecc
Q 005257          357 QEIEAATKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHEN--DGGTRAFLAEISSLGRLKHKSLVGLRGWCKREK  434 (705)
Q Consensus       357 ~el~~at~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~--~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~  434 (705)
                      ++.....++|...+.||+|+||.||+|.+..   .+|+|+++...  ....+.+.+|+.++++++||||+++++++.. .
T Consensus        26 ~~~~i~~~~~~~~~~lg~G~~g~V~~~~~~~---~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~  101 (319)
T 2y4i_B           26 QEWDIPFEQLEIGELIGKGRFGQVYHGRWHG---EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMS-P  101 (319)
T ss_dssp             GGSSSCCSCEECCCBCCCSSSSEEEEEEESS---SEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEEC-S
T ss_pred             ccccCCHHHeEEeeEeccCCceEEEEEEEcC---eEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEec-C
Confidence            3344456788999999999999999999864   39999987542  2334567889999999999999999999886 6


Q ss_pred             CceEEEEeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeecc
Q 005257          435 GSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGL  514 (705)
Q Consensus       435 ~~~~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGl  514 (705)
                      +..++||||+++++|.+++....  ..+++.+++.++.|++.||.|||+   .+++||||||+|||++ ++.+||+|||+
T Consensus       102 ~~~~iv~e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~al~~lH~---~~i~H~dlkp~NIl~~-~~~~~l~Dfg~  175 (319)
T 2y4i_B          102 PHLAIITSLCKGRTLYSVVRDAK--IVLDVNKTRQIAQEIVKGMGYLHA---KGILHKDLKSKNVFYD-NGKVVITDFGL  175 (319)
T ss_dssp             SCEEEECBCCCSEEHHHHTTSSC--CCCCSHHHHHHHHHHHHHHHHHHH---TTCCCCCCCSTTEEEC---CCEECCCSC
T ss_pred             CceEEEeecccCCcHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHh---CCccccCCChhhEEEe-CCCEEEeecCC
Confidence            67999999999999999996543  268999999999999999999999   9999999999999998 67999999999


Q ss_pred             ceecCCCC----cceeeeeeccccCCCcccccc---------CCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHH
Q 005257          515 ARMHGHGQ----VASTTRVVGTVGYLAPEVFSS---------GRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVW  581 (705)
Q Consensus       515 a~~~~~~~----~~~~~~~~gt~~y~APE~~~~---------~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~  581 (705)
                      ++......    ........||+.|+|||++..         ..++.++|||||||++|||++|+.||......   ...
T Consensus       176 ~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~---~~~  252 (319)
T 2y4i_B          176 FSISGVLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAE---AII  252 (319)
T ss_dssp             CC----------CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCCHH---HHH
T ss_pred             ccccccccccccccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH---HHH
Confidence            87653211    112223468999999999864         35789999999999999999999999765432   111


Q ss_pred             HHHHhCchhHHHHHhhhcCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHhccc
Q 005257          582 ELMVQGKLLDALDARLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLEGKIE  641 (705)
Q Consensus       582 ~~~~~~~~~~~id~~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~  641 (705)
                      ..+..+...          ..........+.+++..||+.||++|||+.++++.|+...+
T Consensus       253 ~~~~~~~~~----------~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~l~~  302 (319)
T 2y4i_B          253 WQMGTGMKP----------NLSQIGMGKEISDILLFCWAFEQEERPTFTKLMDMLEKLPK  302 (319)
T ss_dssp             HHHHTTCCC----------CCCCSSCCTTHHHHHHHHHCSSTTTSCCHHHHHHHHTTC--
T ss_pred             HHhccCCCC----------CCCcCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHH
Confidence            122222110          00111223467899999999999999999999999997655

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}

Probab=100.00  E-value=1.6e-37  Score=334.94  Aligned_cols=258  Identities=22%  Similarity=0.297  Sum_probs=199.1

Q ss_pred             hCCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCC--chhHHHHHHHHHHhccCCCCCcceeeeeeeeccC-----
Q 005257          363 TKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHEN--DGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKG-----  435 (705)
Q Consensus       363 t~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~--~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~-----  435 (705)
                      .++|...+.||+|+||.||+|.+..+|+.||||++....  ....+.+.+|+.+++.++||||+++++++.....     
T Consensus        23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~  102 (353)
T 3coi_A           23 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFY  102 (353)
T ss_dssp             ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCC
T ss_pred             CceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEecccccccce
Confidence            457888999999999999999999999999999997543  2345678999999999999999999998875332     


Q ss_pred             ceEEEEeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccc
Q 005257          436 SLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLA  515 (705)
Q Consensus       436 ~~~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla  515 (705)
                      ..++||||++ ++|.+++..     .+++.++..++.||+.||.|||+   .+|+||||||+|||++.++.+||+|||++
T Consensus       103 ~~~lv~e~~~-~~l~~~~~~-----~~~~~~~~~i~~qi~~al~~LH~---~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~  173 (353)
T 3coi_A          103 DFYLVMPFMQ-TDLQKIMGL-----KFSEEKIQYLVYQMLKGLKYIHS---AGVVHRDLKPGNLAVNEDCELKILDFGLA  173 (353)
T ss_dssp             CCEEEEECCS-EEGGGTTTS-----CCCHHHHHHHHHHHHHHHHHHHH---TTCCCSSCCGGGEEECTTCCEEECSTTCT
T ss_pred             eEEEEecccc-CCHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEeECCCCcEEEeecccc
Confidence            3599999997 588887732     58999999999999999999999   99999999999999999999999999999


Q ss_pred             eecCCCCcceeeeeeccccCCCcccccc-CCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHH-hCchhHHH
Q 005257          516 RMHGHGQVASTTRVVGTVGYLAPEVFSS-GRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMV-QGKLLDAL  593 (705)
Q Consensus       516 ~~~~~~~~~~~~~~~gt~~y~APE~~~~-~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~-~~~~~~~i  593 (705)
                      +.....    .....||+.|+|||++.+ ..++.++|||||||++|||++|+.||.....  .+....... .+......
T Consensus       174 ~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~--~~~~~~i~~~~~~~~~~~  247 (353)
T 3coi_A          174 RHADAE----MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDY--LDQLTQILKVTGVPGTEF  247 (353)
T ss_dssp             TC------------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSCH--HHHHHHHHHHHCBCCHHH
T ss_pred             cCCCCC----ccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH--HHHHHHHHHHhCCCCHHH
Confidence            865432    233578999999999877 6789999999999999999999999986542  121111111 11110000


Q ss_pred             ------------HHhhhcC-----CCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 005257          594 ------------DARLRAK-----GGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKV  635 (705)
Q Consensus       594 ------------d~~l~~~-----~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  635 (705)
                                  ...+...     ..........+.+++..||+.||++|||+.|++++
T Consensus       248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~h  306 (353)
T 3coi_A          248 VQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTH  306 (353)
T ss_dssp             HTTCSCHHHHHHHHTSCBCSSCCTTTTCTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred             HHHHhhHHHHHHHHhCcCCCCccHHHhcCCcCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence                        0000000     01112335678899999999999999999999874

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*

Probab=100.00  E-value=8.4e-38  Score=335.15  Aligned_cols=258  Identities=21%  Similarity=0.312  Sum_probs=176.4

Q ss_pred             HhCCCCcc-eEEeecCceEEEEEEEcCCCeEEEEEEeccCCchhHHHHHHHH-HHhccCCCCCcceeeeeeeec---cCc
Q 005257          362 ATKGFSEE-NVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAEI-SSLGRLKHKSLVGLRGWCKRE---KGS  436 (705)
Q Consensus       362 at~~f~~~-~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~~~~~~~~~Ei-~~l~~l~Hpniv~l~g~~~~~---~~~  436 (705)
                      ..++|... ++||+|+||.||+|.+..+++.||||++....     ...+|+ ..+..++||||+++++++...   +..
T Consensus        26 ~~~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~-----~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~  100 (336)
T 3fhr_A           26 VTDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSP-----KARQEVDHHWQASGGPHIVCILDVYENMHHGKRC  100 (336)
T ss_dssp             GGGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESSH-----HHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEE
T ss_pred             ccceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCcH-----HHHHHHHHHHHhcCCCChHHHHHHHhhccCCCce
Confidence            35678874 46999999999999999999999999986431     122233 345667999999999988642   345


Q ss_pred             eEEEEeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEcc---CCCeeeeeec
Q 005257          437 LMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDK---EMNGRLGDFG  513 (705)
Q Consensus       437 ~~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~---~~~~kL~DFG  513 (705)
                      +++||||+++|+|.+++..... ..+++.+++.++.|++.||.|||+   .+|+||||||+|||++.   ++.+||+|||
T Consensus       101 ~~lv~e~~~gg~L~~~l~~~~~-~~l~~~~~~~i~~ql~~~l~~LH~---~~ivH~dlkp~NIll~~~~~~~~~kl~Dfg  176 (336)
T 3fhr_A          101 LLIIMECMEGGELFSRIQERGD-QAFTEREAAEIMRDIGTAIQFLHS---HNIAHRDVKPENLLYTSKEKDAVLKLTDFG  176 (336)
T ss_dssp             EEEEEECCTTEEHHHHHHTC-C-CCCBHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEESCSSTTCCEEECCCT
T ss_pred             EEEEEeccCCCCHHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEEecCCCceEEEeccc
Confidence            8999999999999999986543 369999999999999999999999   99999999999999986   4559999999


Q ss_pred             cceecCCCCcceeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhhCCCCCCCCCccHH-HHHHHHHHhCchhHH
Q 005257          514 LARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLV-EMVWELMVQGKLLDA  592 (705)
Q Consensus       514 la~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~-~~v~~~~~~~~~~~~  592 (705)
                      +++......   .....||+.|+|||++.+..++.++|||||||++|||++|+.||........ ......+..+     
T Consensus       177 ~~~~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~-----  248 (336)
T 3fhr_A          177 FAKETTQNA---LQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLG-----  248 (336)
T ss_dssp             TCEEC-------------------------CHHHHHHHHHHHHHHHHHHHHSSCCC------------------------
T ss_pred             cceeccccc---cccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCccchhhhhhHHHhhhcc-----
Confidence            998664322   2335789999999999888899999999999999999999999975432111 0000000000     


Q ss_pred             HHHhhhcCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHH--HHHhc
Q 005257          593 LDARLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVK--VLEGK  639 (705)
Q Consensus       593 id~~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~--~L~~~  639 (705)
                         ...............+.+++..||+.||++|||+.|+++  ++.+.
T Consensus       249 ---~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~  294 (336)
T 3fhr_A          249 ---QYGFPNPEWSEVSEDAKQLIRLLLKTDPTERLTITQFMNHPWINQS  294 (336)
T ss_dssp             -----CCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHSHHHHTG
T ss_pred             ---ccccCchhhccCCHHHHHHHHHHCCCChhHCcCHHHHhcCcccccc
Confidence               000001111233456889999999999999999999998  44443

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*

Probab=100.00  E-value=3.5e-38  Score=334.01  Aligned_cols=263  Identities=21%  Similarity=0.353  Sum_probs=200.6

Q ss_pred             cccCHHHHHHHhCCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccC--CchhHHHHHHHHHHhccCC--CCCcceee
Q 005257          352 HRITYQEIEAATKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHE--NDGGTRAFLAEISSLGRLK--HKSLVGLR  427 (705)
Q Consensus       352 ~~~~~~el~~at~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~--~~~~~~~~~~Ei~~l~~l~--Hpniv~l~  427 (705)
                      +.+.++.+....++|...+.||+|+||.||++.+.. ++.||||++...  .....+.+.+|+.++.+++  ||||++++
T Consensus        16 ~~~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~   94 (313)
T 3cek_A           16 ENLYFQSMSVKGRIYSILKQIGSGGSSKVFQVLNEK-KQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLY   94 (313)
T ss_dssp             ----CCEEEETTEEEEEEEEEECCSSEEEEEEECTT-CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEE
T ss_pred             CCCCeeeeeeccceEEEEEEecCCCCEEEEEEEcCC-CcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEE
Confidence            344455555666789999999999999999999864 788999998754  3345678899999999997  59999999


Q ss_pred             eeeeeccCceEEEEeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCe
Q 005257          428 GWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNG  507 (705)
Q Consensus       428 g~~~~~~~~~~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~  507 (705)
                      +++.. ....++||| +.+++|.+++....   .+++.+++.++.|++.||.|||+   .+|+||||||+|||+++ +.+
T Consensus        95 ~~~~~-~~~~~lv~e-~~~~~L~~~l~~~~---~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~dlkp~NIl~~~-~~~  165 (313)
T 3cek_A           95 DYEIT-DQYIYMVME-CGNIDLNSWLKKKK---SIDPWERKSYWKNMLEAVHTIHQ---HGIVHSDLKPANFLIVD-GML  165 (313)
T ss_dssp             EEEEC-SSEEEEEEC-CCSEEHHHHHHHCS---SCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEEET-TEE
T ss_pred             EEeec-CCEEEEEEe-cCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHH---CCceecCCCcccEEEEC-CeE
Confidence            98876 668999999 56889999997643   68999999999999999999999   99999999999999964 899


Q ss_pred             eeeeeccceecCCCCcc-eeeeeeccccCCCcccccc-----------CCCCccccEEEEehhHHHHhhCCCCCCCCCcc
Q 005257          508 RLGDFGLARMHGHGQVA-STTRVVGTVGYLAPEVFSS-----------GRASTQTDVFGFGILILEVLSGRRPIEEGKPN  575 (705)
Q Consensus       508 kL~DFGla~~~~~~~~~-~~~~~~gt~~y~APE~~~~-----------~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~  575 (705)
                      ||+|||+++........ ......||+.|+|||++.+           ..++.++|||||||++|||++|+.||......
T Consensus       166 kL~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~  245 (313)
T 3cek_A          166 KLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQ  245 (313)
T ss_dssp             EECCCSSSCC--------------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCCSH
T ss_pred             EEeeccccccccCccccccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHHHH
Confidence            99999999876543221 1234578999999999865           46888999999999999999999999765432


Q ss_pred             HHHHHHHHHHhCchhHHHHHhhhcCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Q 005257          576 LVEMVWELMVQGKLLDALDARLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVL  636 (705)
Q Consensus       576 ~~~~v~~~~~~~~~~~~id~~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L  636 (705)
                      . .....         .++....  ..++......+.+++..||+.||++||++.|+++.-
T Consensus       246 ~-~~~~~---------~~~~~~~--~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h~  294 (313)
T 3cek_A          246 I-SKLHA---------IIDPNHE--IEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHP  294 (313)
T ss_dssp             H-HHHHH---------HHCTTSC--CCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSH
T ss_pred             H-HHHHH---------HHhcccc--cCCcccchHHHHHHHHHHccCCcccCcCHHHHhcCc
Confidence            1 11111         1111111  112222245688999999999999999999998753

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}

Probab=100.00  E-value=5.2e-38  Score=332.40  Aligned_cols=246  Identities=25%  Similarity=0.372  Sum_probs=194.7

Q ss_pred             HHHHhCCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCCch------hHHHHHHHHHHhccC----CCCCcceeee
Q 005257          359 IEAATKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDG------GTRAFLAEISSLGRL----KHKSLVGLRG  428 (705)
Q Consensus       359 l~~at~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~~------~~~~~~~Ei~~l~~l----~Hpniv~l~g  428 (705)
                      .+...++|...+.||+|+||.||+|.+..+++.||||++......      ....+.+|+.++.++    +||||+++++
T Consensus        26 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~  105 (312)
T 2iwi_A           26 REAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLD  105 (312)
T ss_dssp             -------CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEE
T ss_pred             hhhhhhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEE
Confidence            344567899999999999999999999888999999998654321      223456788888888    8999999999


Q ss_pred             eeeeccCceEEEEee-CCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEc-cCCC
Q 005257          429 WCKREKGSLMLVYDY-MENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLD-KEMN  506 (705)
Q Consensus       429 ~~~~~~~~~~lV~E~-~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld-~~~~  506 (705)
                      ++.. .+..++|+|+ +.+++|.+++....   .+++.+++.++.|++.||.|||+   .+|+||||||+||+++ .++.
T Consensus       106 ~~~~-~~~~~~v~e~~~~~~~L~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~  178 (312)
T 2iwi_A          106 WFET-QEGFMLVLERPLPAQDLFDYITEKG---PLGEGPSRCFFGQVVAAIQHCHS---RGVVHRDIKDENILIDLRRGC  178 (312)
T ss_dssp             EC------CEEEEECCSSEEEHHHHHHHHC---SCCHHHHHHHHHHHHHHHHHHHH---HTEECCCCSGGGEEEETTTTE
T ss_pred             EEec-CCeEEEEEEecCCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHH---CCeeecCCChhhEEEeCCCCe
Confidence            8876 5678999999 78999999997643   58999999999999999999998   8999999999999999 8899


Q ss_pred             eeeeeeccceecCCCCcceeeeeeccccCCCccccccCCC-CccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHH
Q 005257          507 GRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRA-STQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMV  585 (705)
Q Consensus       507 ~kL~DFGla~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~-s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~  585 (705)
                      +||+|||+++......   .....||+.|+|||++.+..+ +.++|||||||++|||++|+.||.....           
T Consensus       179 ~kl~dfg~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~-----------  244 (312)
T 2iwi_A          179 AKLIDFGSGALLHDEP---YTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQE-----------  244 (312)
T ss_dssp             EEECCCSSCEECCSSC---BCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHH-----------
T ss_pred             EEEEEcchhhhcccCc---ccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCChHH-----------
Confidence            9999999998765432   233568999999999877665 4589999999999999999999964210           


Q ss_pred             hCchhHHHHHhhhcCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 005257          586 QGKLLDALDARLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKV  635 (705)
Q Consensus       586 ~~~~~~~id~~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  635 (705)
                            .....    ..++......+.+++..||+.||++|||+.|++++
T Consensus       245 ------~~~~~----~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~  284 (312)
T 2iwi_A          245 ------ILEAE----LHFPAHVSPDCCALIRRCLAPKPSSRPSLEEILLD  284 (312)
T ss_dssp             ------HHHTC----CCCCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHHS
T ss_pred             ------Hhhhc----cCCcccCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence                  11111    11223334567899999999999999999999984

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}

Probab=100.00  E-value=5.8e-38  Score=345.06  Aligned_cols=262  Identities=24%  Similarity=0.307  Sum_probs=182.2

Q ss_pred             ceEEeecCceEEEEEEEc--CCCeEEEEEEeccCCchhHHHHHHHHHHhccCCCCCcceeeeeeee-ccCceEEEEeeCC
Q 005257          369 ENVIGVGGNGKVYKGVLE--GGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKR-EKGSLMLVYDYME  445 (705)
Q Consensus       369 ~~~LG~G~fg~Vy~~~~~--~~~~~vavK~i~~~~~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~-~~~~~~lV~E~~~  445 (705)
                      .++||+|+||+||+|.++  .+++.||||++....  ..+.+.+|+.+|++++||||+++++++.. ....+++||||++
T Consensus        26 g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~lv~e~~~  103 (405)
T 3rgf_A           26 GCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTG--ISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAE  103 (405)
T ss_dssp             SCCCC-----EEEEEEESSSSCCCCEEEEECSSSS--CCHHHHHHHHHHHHCCCTTBCCCCEEEEETTTTEEEEEEECCS
T ss_pred             CcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCC--CCHHHHHHHHHHHhcCCCCeeeEeeEEecCCCCeEEEEEeCCC
Confidence            457999999999999976  457889999986442  34578899999999999999999999864 3567899999997


Q ss_pred             CCChhHHHHhcC------CCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEE----ccCCCeeeeeeccc
Q 005257          446 NGSLDKWIFQCD------GSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLL----DKEMNGRLGDFGLA  515 (705)
Q Consensus       446 ~gsL~~~L~~~~------~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILl----d~~~~~kL~DFGla  515 (705)
                       |+|.+++....      ....+++..++.++.||+.||.|||+   .+|+||||||+|||+    +.++.+||+|||++
T Consensus       104 -~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~---~~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a  179 (405)
T 3rgf_A          104 -HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHA---NWVLHRDLKPANILVMGEGPERGRVKIADMGFA  179 (405)
T ss_dssp             -EEHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECCSSTTTTCEEECCTTCC
T ss_pred             -CCHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHh---CCEeCCCcCHHHeEEecCCCCCCcEEEEECCCc
Confidence             58888775321      12249999999999999999999999   999999999999999    67889999999999


Q ss_pred             eecCCCCc--ceeeeeeccccCCCccccccC-CCCccccEEEEehhHHHHhhCCCCCCCCCcc----------HHHHHHH
Q 005257          516 RMHGHGQV--ASTTRVVGTVGYLAPEVFSSG-RASTQTDVFGFGILILEVLSGRRPIEEGKPN----------LVEMVWE  582 (705)
Q Consensus       516 ~~~~~~~~--~~~~~~~gt~~y~APE~~~~~-~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~----------~~~~v~~  582 (705)
                      +.......  ......+||+.|+|||++.+. .++.++|||||||++|||++|+.||......          ....+..
T Consensus       180 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~l~~i~~  259 (405)
T 3rgf_A          180 RLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFN  259 (405)
T ss_dssp             C----------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCCCC------CCCCHHHHHHHHH
T ss_pred             eecCCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCCccccccccccchHHHHHHHHH
Confidence            87654322  223446899999999999874 5899999999999999999999999754321          1111111


Q ss_pred             HHHhCc---------hh--HHHHHhhhc--CCCCCH---------HHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Q 005257          583 LMVQGK---------LL--DALDARLRA--KGGFDE---------DEVERVLHLGLLCAYPDPRARPTMRQVVKVL  636 (705)
Q Consensus       583 ~~~~~~---------~~--~~id~~l~~--~~~~~~---------~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L  636 (705)
                      .+....         +.  ..+...+..  ......         .....+.+|+..||+.||.+|||+.|++++-
T Consensus       260 ~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~L~~dP~~R~ta~e~L~hp  335 (405)
T 3rgf_A          260 VMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQDP  335 (405)
T ss_dssp             HHCCCCTTTCGGGGGSTTHHHHHHHCCGGGGTTCCHHHHHHTTTCCTTSHHHHHHHHHSCSSGGGSCCHHHHHTSG
T ss_pred             hhCCCChhhcchhhcCcchhhhhhhccccCCCcchhhhhHhhcCCCCCHHHHHHHHHHccCCcccCCCHHHHhcCh
Confidence            110000         00  000000000  000000         0134678899999999999999999999853

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*

Probab=100.00  E-value=7.7e-38  Score=333.47  Aligned_cols=257  Identities=26%  Similarity=0.375  Sum_probs=181.0

Q ss_pred             hCCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCCc-hhHHHHHHHHH-HhccCCCCCcceeeeeeeeccCceEEE
Q 005257          363 TKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHEND-GGTRAFLAEIS-SLGRLKHKSLVGLRGWCKREKGSLMLV  440 (705)
Q Consensus       363 t~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~-~~~~~~~~Ei~-~l~~l~Hpniv~l~g~~~~~~~~~~lV  440 (705)
                      .++|...+.||+|+||.||+|.+..+++.||||++..... ...+++..|+. +++.++||||+++++++.. .+..++|
T Consensus        21 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~-~~~~~lv   99 (327)
T 3aln_A           21 AEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFR-EGDCWIC   99 (327)
T ss_dssp             SCSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEEC-SSEEEEE
T ss_pred             HHHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEe-CCceEEE
Confidence            4678889999999999999999998999999999976533 34455666666 7888899999999999876 6788999


Q ss_pred             EeeCCCCChhHHHHhc--CCCCcccHHHHHHHHHHHHHHHHHHhcCCCC-CeeecCCCCCCeEEccCCCeeeeeecccee
Q 005257          441 YDYMENGSLDKWIFQC--DGSMMLSCEERIRVLKDVAAGVLYLHEGWEK-KVLHRDIKSSNVLLDKEMNGRLGDFGLARM  517 (705)
Q Consensus       441 ~E~~~~gsL~~~L~~~--~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~-~iiHrDLkp~NILld~~~~~kL~DFGla~~  517 (705)
                      |||+++ +|.+++...  .....+++..+..++.|++.||.|||+   . +|+||||||+|||++.++.+||+|||+++.
T Consensus       100 ~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~---~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~  175 (327)
T 3aln_A          100 MELMST-SFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKE---NLKIIHRDIKPSNILLDRSGNIKLCDFGISGQ  175 (327)
T ss_dssp             ECCCSE-EHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHH---HHSCCCSCCCGGGEEEETTTEEEECCCSSSCC
T ss_pred             EeecCC-ChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhc---cCCEeECCCCHHHEEEcCCCCEEEccCCCcee
Confidence            999985 888877531  123368999999999999999999998   7 999999999999999999999999999986


Q ss_pred             cCCCCcceeeeeeccccCCCcccc----ccCCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhHHH
Q 005257          518 HGHGQVASTTRVVGTVGYLAPEVF----SSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDAL  593 (705)
Q Consensus       518 ~~~~~~~~~~~~~gt~~y~APE~~----~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~~i  593 (705)
                      ......  .....||+.|+|||++    .+..++.++|||||||++|||++|+.||....... +.. .....+..    
T Consensus       176 ~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~-~~~-~~~~~~~~----  247 (327)
T 3aln_A          176 LVDSIA--KTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVF-DQL-TQVVKGDP----  247 (327)
T ss_dssp             --------------------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC---------CCCCCSCC----
T ss_pred             cccccc--cccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchHH-HHH-HHHhcCCC----
Confidence            644322  2234789999999998    45678999999999999999999999997643210 000 00000000    


Q ss_pred             HHhhhcCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 005257          594 DARLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKV  635 (705)
Q Consensus       594 d~~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  635 (705)
                       +.+.  ..........+.+++..||+.||++||++.++++.
T Consensus       248 -~~~~--~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h  286 (327)
T 3aln_A          248 -PQLS--NSEEREFSPSFINFVNLCLTKDESKRPKYKELLKH  286 (327)
T ss_dssp             -CCCC--CCSSCCCCHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred             -CCCC--CcccccCCHHHHHHHHHHhhCChhhCcCHHHHHhC
Confidence             0000  10111234578899999999999999999999873

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...

Probab=100.00  E-value=3.4e-38  Score=335.74  Aligned_cols=245  Identities=25%  Similarity=0.388  Sum_probs=201.3

Q ss_pred             HHHhCCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCCch------hHHHHHHHHHHhccCC--CCCcceeeeeee
Q 005257          360 EAATKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDG------GTRAFLAEISSLGRLK--HKSLVGLRGWCK  431 (705)
Q Consensus       360 ~~at~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~~------~~~~~~~Ei~~l~~l~--Hpniv~l~g~~~  431 (705)
                      ....++|...+.||+|+||.||+|.+..+++.||||++......      ..+.+.+|+.++++++  ||||+++++++.
T Consensus        39 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~  118 (320)
T 3a99_A           39 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFE  118 (320)
T ss_dssp             -CCTTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEE
T ss_pred             CCccCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEe
Confidence            34467789999999999999999999999999999998754221      2245678999999996  599999999987


Q ss_pred             eccCceEEEEeeCCC-CChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEc-cCCCeee
Q 005257          432 REKGSLMLVYDYMEN-GSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLD-KEMNGRL  509 (705)
Q Consensus       432 ~~~~~~~lV~E~~~~-gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld-~~~~~kL  509 (705)
                      . .+..++|+|++.+ ++|.+++....   .+++..++.++.|++.||.|||+   .+|+||||||+|||++ +++.+||
T Consensus       119 ~-~~~~~lv~e~~~~~~~L~~~l~~~~---~l~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dlkp~NIll~~~~~~~kL  191 (320)
T 3a99_A          119 R-PDSFVLILERPEPVQDLFDFITERG---ALQEELARSFFWQVLEAVRHCHN---CGVLHRDIKDENILIDLNRGELKL  191 (320)
T ss_dssp             C-SSEEEEEEECCSSEEEHHHHHHHHC---SCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEEETTTTEEEE
T ss_pred             c-CCcEEEEEEcCCCCccHHHHHhccC---CCCHHHHHHHHHHHHHHHHHHHH---CCcEeCCCCHHHEEEeCCCCCEEE
Confidence            6 6788999999976 89999997643   68999999999999999999998   9999999999999999 7889999


Q ss_pred             eeeccceecCCCCcceeeeeeccccCCCccccccCCC-CccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCc
Q 005257          510 GDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRA-STQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGK  588 (705)
Q Consensus       510 ~DFGla~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~-s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~  588 (705)
                      +|||+++......   .....||+.|+|||++.+..+ +.++|||||||++|||++|+.||.....         ...+.
T Consensus       192 ~Dfg~~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~---------~~~~~  259 (320)
T 3a99_A          192 IDFGSGALLKDTV---YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE---------IIRGQ  259 (320)
T ss_dssp             CCCTTCEECCSSC---BCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHH---------HHHCC
T ss_pred             eeCcccccccccc---ccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCChhh---------hhccc
Confidence            9999998765432   223578999999999977665 6889999999999999999999965210         11111


Q ss_pred             hhHHHHHhhhcCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 005257          589 LLDALDARLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKV  635 (705)
Q Consensus       589 ~~~~id~~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  635 (705)
                                  ..++......+.+++..||+.||++|||+.|+++.
T Consensus       260 ------------~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h  294 (320)
T 3a99_A          260 ------------VFFRQRVSSECQHLIRWCLALRPSDRPTFEEIQNH  294 (320)
T ss_dssp             ------------CCCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred             ------------ccccccCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence                        11122233567899999999999999999999874

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}

Probab=100.00  E-value=3.3e-37  Score=326.58  Aligned_cols=253  Identities=22%  Similarity=0.309  Sum_probs=181.4

Q ss_pred             hCCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCCch-hH-HHHHHHHHHhccCCCCCcceeeeeeeeccCceEEE
Q 005257          363 TKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDG-GT-RAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLV  440 (705)
Q Consensus       363 t~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~~-~~-~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~lV  440 (705)
                      .++|...+.||+|+||.||+|.+..+++.||||++...... .. +.+.++..+++.++||||+++++++.. .+..++|
T Consensus        24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~-~~~~~lv  102 (318)
T 2dyl_A           24 INDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFIT-NTDVFIA  102 (318)
T ss_dssp             GGGEEEEEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEEC-SSEEEEE
T ss_pred             hccccccceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEec-CCcEEEE
Confidence            35678889999999999999999988999999999765332 22 334445567888899999999999876 6789999


Q ss_pred             EeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCC-CeeecCCCCCCeEEccCCCeeeeeeccceecC
Q 005257          441 YDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEK-KVLHRDIKSSNVLLDKEMNGRLGDFGLARMHG  519 (705)
Q Consensus       441 ~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~-~iiHrDLkp~NILld~~~~~kL~DFGla~~~~  519 (705)
                      |||+ ++.+..++....  ..+++..+..++.|++.||.|||+   . +++||||||+|||++.++.+||+|||+++...
T Consensus       103 ~e~~-~~~~~~l~~~~~--~~~~~~~~~~~~~~i~~~l~~lH~---~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~  176 (318)
T 2dyl_A          103 MELM-GTCAEKLKKRMQ--GPIPERILGKMTVAIVKALYYLKE---KHGVIHRDVKPSNILLDERGQIKLCDFGISGRLV  176 (318)
T ss_dssp             ECCC-SEEHHHHHHHHT--SCCCHHHHHHHHHHHHHHHHHHHH---HHCCCCCCCCGGGEEECTTSCEEECCCTTC----
T ss_pred             Eecc-CCcHHHHHHHhc--cCCCHHHHHHHHHHHHHHHHHHHh---hCCEEeCCCCHHHEEECCCCCEEEEECCCchhcc
Confidence            9999 455655554332  268999999999999999999997   5 99999999999999999999999999997654


Q ss_pred             CCCcceeeeeeccccCCCccccc-----cCCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhHHHH
Q 005257          520 HGQVASTTRVVGTVGYLAPEVFS-----SGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALD  594 (705)
Q Consensus       520 ~~~~~~~~~~~gt~~y~APE~~~-----~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~~id  594 (705)
                      ....  .....||+.|+|||++.     ...++.++|||||||++|||++|+.||....... +. ......+...    
T Consensus       177 ~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~-~~-~~~~~~~~~~----  248 (318)
T 2dyl_A          177 DDKA--KDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDF-EV-LTKVLQEEPP----  248 (318)
T ss_dssp             ------------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCCSHH-HH-HHHHHHSCCC----
T ss_pred             CCcc--ccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCCccH-HH-HHHHhccCCC----
Confidence            4322  23357899999999984     4568899999999999999999999997643321 11 1111111100    


Q ss_pred             HhhhcCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 005257          595 ARLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKV  635 (705)
Q Consensus       595 ~~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  635 (705)
                       .+.    ........+.+++..||+.||.+||++.+++++
T Consensus       249 -~~~----~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h  284 (318)
T 2dyl_A          249 -LLP----GHMGFSGDFQSFVKDCLTKDHRKRPKYNKLLEH  284 (318)
T ss_dssp             -CCC----SSSCCCHHHHHHHHHHTCSCTTTSCCHHHHTTS
T ss_pred             -CCC----ccCCCCHHHHHHHHHHccCChhHCcCHHHHhhC
Confidence             000    011233568889999999999999999999874

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*

Probab=100.00  E-value=6.6e-37  Score=339.77  Aligned_cols=251  Identities=25%  Similarity=0.342  Sum_probs=185.6

Q ss_pred             CCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCCchhHHHHHHHHHHhccC-CCCCcceeeeeeeeccCceEEEEee
Q 005257          365 GFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRL-KHKSLVGLRGWCKREKGSLMLVYDY  443 (705)
Q Consensus       365 ~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~~~~~~~~~Ei~~l~~l-~Hpniv~l~g~~~~~~~~~~lV~E~  443 (705)
                      .|...+.||+|+||+||.+.. .+|+.||||++...   ..+.+.+|+.++.++ +||||+++++++.. +..+++||||
T Consensus        16 ~~~~~~~LG~G~~g~V~~~~~-~~g~~vAvK~~~~~---~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~-~~~~~lv~E~   90 (434)
T 2rio_A           16 LVVSEKILGYGSSGTVVFQGS-FQGRPVAVKRMLID---FCDIALMEIKLLTESDDHPNVIRYYCSETT-DRFLYIALEL   90 (434)
T ss_dssp             CEEEEEEEEECSTTCEEEEEE-SSSSEEEEEEEEGG---GHHHHHHHHHHHHHHTTSTTBCCEEEEEEC-SSEEEEEECC
T ss_pred             eeeccCeEeeCCCeEEEEEEE-ECCeEEEEEEEcHH---HHHHHHHHHHHHHhccCCCCcCeEEEEEec-CCeEEEEEec
Confidence            455578899999999987544 46899999998643   345678999999886 89999999998875 6789999999


Q ss_pred             CCCCChhHHHHhcCCCC----cccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccC-------------CC
Q 005257          444 MENGSLDKWIFQCDGSM----MLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKE-------------MN  506 (705)
Q Consensus       444 ~~~gsL~~~L~~~~~~~----~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~-------------~~  506 (705)
                      +. |+|.+++.......    ..++..++.++.||+.||.|||+   .+|+||||||+|||++.+             +.
T Consensus        91 ~~-gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~  166 (434)
T 2rio_A           91 CN-LNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHS---LKIIHRDLKPQNILVSTSSRFTADQQTGAENLR  166 (434)
T ss_dssp             CS-EEHHHHHHTC------------CCHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEEECCHHHHSCCTTCCCSCE
T ss_pred             CC-CCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHH---CCccccCCChHhEEEecCcccccccccCCCceE
Confidence            95 69999997643211    12344567899999999999998   999999999999999754             48


Q ss_pred             eeeeeeccceecCCCCcc---eeeeeeccccCCCcccccc-------CCCCccccEEEEehhHHHHhh-CCCCCCCCCcc
Q 005257          507 GRLGDFGLARMHGHGQVA---STTRVVGTVGYLAPEVFSS-------GRASTQTDVFGFGILILEVLS-GRRPIEEGKPN  575 (705)
Q Consensus       507 ~kL~DFGla~~~~~~~~~---~~~~~~gt~~y~APE~~~~-------~~~s~ksDVwS~Gvvl~Ellt-G~~Pf~~~~~~  575 (705)
                      +||+|||+++........   ......||+.|+|||++.+       ..++.++|||||||++|||++ |+.||......
T Consensus       167 ~kL~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~  246 (434)
T 2rio_A          167 ILISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSR  246 (434)
T ss_dssp             EEECCCTTCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCSTTTH
T ss_pred             EEEcccccceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCCchhh
Confidence            999999999887654322   1234579999999999865       568999999999999999999 99999764322


Q ss_pred             HHHHHHHHHHhCchhHHHHHhhhcCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHH
Q 005257          576 LVEMVWELMVQGKLLDALDARLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVK  634 (705)
Q Consensus       576 ~~~~v~~~~~~~~~~~~id~~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~  634 (705)
                      ..     .+..+....   +..  ...........+.+++..||+.||.+|||+.++++
T Consensus       247 ~~-----~i~~~~~~~---~~~--~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~  295 (434)
T 2rio_A          247 ES-----NIIRGIFSL---DEM--KCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLR  295 (434)
T ss_dssp             HH-----HHHHTCCCC---CCC--TTCCCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             HH-----HHhcCCCCc---ccc--cccccccchHHHHHHHHHHhhCChhhCCCHHHHHh
Confidence            11     111111000   000  01123456678999999999999999999999986

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}

Probab=100.00  E-value=2.2e-36  Score=335.15  Aligned_cols=250  Identities=24%  Similarity=0.344  Sum_probs=185.7

Q ss_pred             HhCCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCCchhHHHHHHHHHHhccC-CCCCcceeeeeeeeccCceEEE
Q 005257          362 ATKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRL-KHKSLVGLRGWCKREKGSLMLV  440 (705)
Q Consensus       362 at~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~~~~~~~~~Ei~~l~~l-~Hpniv~l~g~~~~~~~~~~lV  440 (705)
                      ...+|...++||+|+||+||.... .+++.||||++.....   ..+.+|+++++++ +||||+++++++.. ....++|
T Consensus        22 ~~~~y~~~~~LG~G~~G~V~~~~~-~~~~~vAvK~~~~~~~---~~~~~E~~~l~~l~~HpnIv~l~~~~~~-~~~~~lv   96 (432)
T 3p23_A           22 GKISFCPKDVLGHGAEGTIVYRGM-FDNRDVAVKRILPECF---SFADREVQLLRESDEHPNVIRYFCTEKD-RQFQYIA   96 (432)
T ss_dssp             TTEEEEEEEEEEECGGGCEEEEEE-SSSSEEEEEEECTTTE---EECHHHHHHHHHSCCCTTBCCEEEEEEE-TTEEEEE
T ss_pred             ccEEEecCCeeecCcCEEEEEEEE-eCCeEEEEEEECHHHH---HHHHHHHHHHHhccCCCCcCeEEEEEec-CCEEEEE
Confidence            345688899999999999654333 3578999999865432   2356799999999 89999999998876 6788999


Q ss_pred             EeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEcc-----CCCeeeeeeccc
Q 005257          441 YDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDK-----EMNGRLGDFGLA  515 (705)
Q Consensus       441 ~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~-----~~~~kL~DFGla  515 (705)
                      |||++ |+|.+++.....  .+.+.+++.++.||+.||.|||+   .+|+||||||+|||++.     ...+||+|||++
T Consensus        97 ~E~~~-g~L~~~l~~~~~--~~~~~~~~~i~~qi~~aL~~LH~---~~ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a  170 (432)
T 3p23_A           97 IELCA-ATLQEYVEQKDF--AHLGLEPITLLQQTTSGLAHLHS---LNIVHRDLKPHNILISMPNAHGKIKAMISDFGLC  170 (432)
T ss_dssp             EECCS-EEHHHHHHSSSC--CCCSSCHHHHHHHHHHHHHHHHH---TTCCCCCCSTTSEEECCCBTTTBCCEEECCTTEE
T ss_pred             EECCC-CCHHHHHHhcCC--CccchhHHHHHHHHHHHHHHHHH---CcCEeCCCCHHHEEEecCCCCCceeEEEecccce
Confidence            99996 599999976543  35556678999999999999999   99999999999999953     335789999999


Q ss_pred             eecCCCCc--ceeeeeeccccCCCccccc---cCCCCccccEEEEehhHHHHhh-CCCCCCCCCccHHHHHHHHHHhCch
Q 005257          516 RMHGHGQV--ASTTRVVGTVGYLAPEVFS---SGRASTQTDVFGFGILILEVLS-GRRPIEEGKPNLVEMVWELMVQGKL  589 (705)
Q Consensus       516 ~~~~~~~~--~~~~~~~gt~~y~APE~~~---~~~~s~ksDVwS~Gvvl~Ellt-G~~Pf~~~~~~~~~~v~~~~~~~~~  589 (705)
                      +.......  .......||+.|+|||++.   ...++.++|||||||++|||++ |+.||.........    .......
T Consensus       171 ~~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~~~~~----~~~~~~~  246 (432)
T 3p23_A          171 KKLAVGRHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQAN----ILLGACS  246 (432)
T ss_dssp             ECC------------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTTHHHH----HHTTCCC
T ss_pred             eeccCCCcceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhHHHHH----HHhccCC
Confidence            87654322  2234467999999999997   4567889999999999999999 99998654322111    1111000


Q ss_pred             hHHHHHhhhcCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHH
Q 005257          590 LDALDARLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVK  634 (705)
Q Consensus       590 ~~~id~~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~  634 (705)
                      ..        ...........+.+++..||+.||++|||+.++++
T Consensus       247 ~~--------~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~evl~  283 (432)
T 3p23_A          247 LD--------CLHPEKHEDVIARELIEKMIAMDPQKRPSAKHVLK  283 (432)
T ss_dssp             CT--------TSCTTCHHHHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             cc--------ccCccccccHHHHHHHHHHHhCCHhhCCCHHHHHh
Confidence            00        01112234456789999999999999999999985

>2dur_A VIP36;, vesicular integral-membrane protein VIP36; beta sandwich, carbohydrate binding protein, cargo receptor, transport; HET: MAN; 1.65A {Canis lupus familiaris} PDB: 2dup_A 2duq_A* 2duo_A* 2e6v_A*

Probab=100.00  E-value=1.2e-35  Score=303.41  Aligned_cols=202  Identities=13%  Similarity=0.158  Sum_probs=151.7

Q ss_pred             CCeEEEcceEeecCcEEecCCCCCeEEEEEcCCCccccCCCCCcccceEEEEEEEEecCCC-CCCCCceEEEEeeCCCCC
Q 005257           36 SNLSLYGTATVESRILTLTNSTTFTIGRALYPSKIPTKRPNSSYVYPFSTSFIFAMAPYKG-VLAGHGLVFLFVPFHGIK  114 (705)
Q Consensus        36 ~~~~~~g~a~~~~~~l~lt~~~~~~~Gr~~y~~pv~l~~~~~~~~~sF~t~F~f~i~~~~~-~~~g~G~aF~~~~~~~~~  114 (705)
                      .+|.++|+|.+.++.|+||++..++.|||||+.|+++        +||+|+|+|.|.+++. ..+||||||+|+|...  
T Consensus        25 ~~~~l~G~a~i~~g~l~LT~~~~~~~G~~w~~~pi~~--------~sF~t~F~F~I~~~~~~~~~gdGlAF~l~~~~~--   94 (253)
T 2dur_A           25 PLWDFQGSTILTSQYVRLTPDERSKEGSIWNHQPCFL--------KDWEMHVHFKVHGTGKKNLHGDGIALWYTRDRL--   94 (253)
T ss_dssp             CSEEEEETCEECSSCEEEECSSSSEEEEEEESSCBCC--------SSEEEEEEEEEECCCCTTCCCCEEEEEEESCCS--
T ss_pred             CCEEEccceEEECCEEEECCCCCCCEEEEEeCCCCcc--------CcEEEEEEEEEecCCCCCcCCCcEEEEEECCCC--
Confidence            6899999999999999999999999999999999997        6899999999998765 5689999999999743  


Q ss_pred             CCCCCCcccccccCCCCCCCCcEEEEEeecccCCCCCCCCCCeeEEecCCCcccccccccccCC-CCCCCCCCCCCCCCC
Q 005257          115 GATEAQHLGLFNRTNDGNSSNHVFGVEFDVFKNQEFNDIDENHVGIDVNSLTSVSAHAAGYWPD-NQTDSSGSNSNSGTG  193 (705)
Q Consensus       115 ~~~~g~~lGl~~~~~~~~~~~~~vaVEFDt~~n~~~~d~~~~Hvgidvns~~S~~~~~~~~~~~-~~~~~~~~~~~~~~~  193 (705)
                        ..|++||+.+       .++.|||||||++|.++.|    |+++||+++.|..++   +|+. .+..+....+|    
T Consensus        95 --~~G~~lG~~~-------~~~gvAVefDT~~n~~~~~----~~~~~I~~~~n~gs~---~~d~~~dg~~~~~~~c----  154 (253)
T 2dur_A           95 --VPGPVFGSKD-------NFHGLAIFLDTYPNDETTE----RVFPYISVMVNNGSL---SYDHSKDGRWTELAGC----  154 (253)
T ss_dssp             --CEETBTEECS-------SCEEEEEEEECSCCCTTCC----SCSSEEEEEEEESCC---CCCGGGTTGGGCCEEE----
T ss_pred             --CCCcccCcCC-------CCCEEEEEEECCCCCCCCC----CCCcEEEEEecCCce---eeeccCCCcccccccc----
Confidence              3589999733       3688999999999985433    555555555554443   2321 00000011111    


Q ss_pred             CCccccceeec-CCCcceEEEEEecCceEEEEEEEccCCCCCCCceeeeecCccccccceecccccccccccccceeeee
Q 005257          194 DDEKSFKELKL-NNGKNYQVWIDYADSFINITMVEAGMKRPKRPLLSVPLNLSGVLEDEMYVGFTAATGQLVESHKILAW  272 (705)
Q Consensus       194 ~~~~~~~~~~l-~~g~~~~~~I~Y~~~~~~v~~~~~~~~~~~~~~ls~~vdl~~~l~~~~~vGfsastg~~~~~h~i~~w  272 (705)
                             .+.+ +.|.+++|||+|+...|+|++.+.+.. +..+.  ..++ ...||+++||||||+||...+.|+|++|
T Consensus       155 -------~~~~~n~g~~~~v~I~Y~~~~L~V~l~~~~~~-~~~~~--~~~~-~v~Lp~~~yvGfSAaTG~~~~~h~Ilsw  223 (253)
T 2dur_A          155 -------TADFRNRDHDTFLAVRYSRGRLTVMTDLEDKN-EWKNC--IDIT-GVRLPTGYYFGASAGTGDLSDNHDIISM  223 (253)
T ss_dssp             -------ECCCBTCSSCEEEEEEEETTEEEEEEECSSSS-CCEEE--EEEC-CEECCSSBEEEEEEEESSSCCEEEEEEE
T ss_pred             -------cHhhccCCCCeEEEEEEECCEEEEEEeCCCCC-CceEE--EEeC-CcccCCCcEEEEEeccCCCcceEEEEEE
Confidence                   2233 348899999999777999999865432 33333  3445 4459999999999999999999999999


Q ss_pred             eecccc
Q 005257          273 SFSNTK  278 (705)
Q Consensus       273 sf~~~~  278 (705)
                      +|.+-.
T Consensus       224 sf~sl~  229 (253)
T 2dur_A          224 KLFQLM  229 (253)
T ss_dssp             EEEECC
T ss_pred             EEEecc
Confidence            998754

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*

Probab=100.00  E-value=4.7e-37  Score=352.84  Aligned_cols=263  Identities=24%  Similarity=0.378  Sum_probs=202.2

Q ss_pred             hCCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccC-CchhHHHHHHHHHHhccCCCCCcceeeeeeee-----ccCc
Q 005257          363 TKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHE-NDGGTRAFLAEISSLGRLKHKSLVGLRGWCKR-----EKGS  436 (705)
Q Consensus       363 t~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~-~~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~-----~~~~  436 (705)
                      .++|...+.||+|+||.||+|.+..+++.||||++... .....+.+.+|++++++++||||+++++++..     ..+.
T Consensus        13 ~grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~~   92 (676)
T 3qa8_A           13 CGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDL   92 (676)
T ss_dssp             ----CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTSS
T ss_pred             CCCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCCe
Confidence            36799999999999999999999988999999998765 33456779999999999999999999998643     2557


Q ss_pred             eEEEEeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCC---eeeeeec
Q 005257          437 LMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMN---GRLGDFG  513 (705)
Q Consensus       437 ~~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~---~kL~DFG  513 (705)
                      .++||||+++|+|.+++........+++..++.++.|++.||.|||+   .+|+||||||+|||++.++.   +||+|||
T Consensus        93 ~~LVmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLHs---~gIVHrDLKP~NILl~~~g~~~~vKL~DFG  169 (676)
T 3qa8_A           93 PLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHE---NRIIHRDLKPENIVLQPGPQRLIHKIIDLG  169 (676)
T ss_dssp             CCCEEECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHHH---TTBCCCCCCSTTEEEECCSSSCEEEECSCC
T ss_pred             EEEEEEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHH---CCCccCCCCHHHeEeecCCCceeEEEcccc
Confidence            79999999999999999876554569999999999999999999999   99999999999999997765   8999999


Q ss_pred             cceecCCCCcceeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhC----ch
Q 005257          514 LARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQG----KL  589 (705)
Q Consensus       514 la~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~----~~  589 (705)
                      +++.......  .....||+.|+|||++.+..++.++|||||||++|||++|+.||...... ..|.......+    ..
T Consensus       170 ~a~~~~~~~~--~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~-~~~~~~i~~~~~~~~~~  246 (676)
T 3qa8_A          170 YAKELDQGEL--CTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQP-VQWHGKVREKSNEHIVV  246 (676)
T ss_dssp             CCCBTTSCCC--CCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCSSCHH-HHSSTTCC------CCS
T ss_pred             cccccccccc--cccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCcccch-hhhhhhhhcccchhhhh
Confidence            9987654432  23457899999999999999999999999999999999999999764321 11100000000    00


Q ss_pred             hHH------HHHhhhcCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHH
Q 005257          590 LDA------LDARLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQ  631 (705)
Q Consensus       590 ~~~------id~~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~e  631 (705)
                      .+.      ....+.............+.+++..||..||++|||+.+
T Consensus       247 ~~~l~g~~~~~~~lp~p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~e  294 (676)
T 3qa8_A          247 YDDLTGAVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQ  294 (676)
T ss_dssp             CCCCSSSCCCCSSSCCSCCCCGGGHHHHHHHHHHHSCSSCC---CCTT
T ss_pred             hhhhccccccccccCCchhhchhhhHHHHHHHHHHccCCHhhCcCHHH
Confidence            000      000111112234456788999999999999999999977

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}

Probab=100.00  E-value=9.1e-36  Score=349.06  Aligned_cols=241  Identities=22%  Similarity=0.302  Sum_probs=193.7

Q ss_pred             hCCCCcceEEeecCceEEEEEEEcC-CCeEEEEEEeccCC-chhHHHHHHHHHHhccCCCCCcceeeeeeeeccCc----
Q 005257          363 TKGFSEENVIGVGGNGKVYKGVLEG-GGAEIAVKRISHEN-DGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGS----  436 (705)
Q Consensus       363 t~~f~~~~~LG~G~fg~Vy~~~~~~-~~~~vavK~i~~~~-~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~----  436 (705)
                      .++|...+.||+|+||.||+|.+.. +++.||||++.... ....+.+.+|++++.+++||||+++++++...+..    
T Consensus        79 ~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~  158 (681)
T 2pzi_A           79 AGQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDPV  158 (681)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCEE
T ss_pred             CCceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCce
Confidence            3679999999999999999999975 68999999986543 34456789999999999999999999998864332    


Q ss_pred             eEEEEeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccce
Q 005257          437 LMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLAR  516 (705)
Q Consensus       437 ~~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~  516 (705)
                      .+|||||+++++|.+++..     .+++.+++.++.||+.||.|||+   ++|+||||||+|||++.+ .+||+|||+++
T Consensus       159 ~~lv~E~~~g~~L~~~~~~-----~l~~~~~~~~~~qi~~aL~~lH~---~giiHrDlkp~NIll~~~-~~kl~DFG~a~  229 (681)
T 2pzi_A          159 GYIVMEYVGGQSLKRSKGQ-----KLPVAEAIAYLLEILPALSYLHS---IGLVYNDLKPENIMLTEE-QLKLIDLGAVS  229 (681)
T ss_dssp             EEEEEECCCCEECC----C-----CCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECSS-CEEECCCTTCE
T ss_pred             eEEEEEeCCCCcHHHHHhC-----CCCHHHHHHHHHHHHHHHHHHHH---CCCeecccChHHeEEeCC-cEEEEecccch
Confidence            6999999999999987743     68999999999999999999998   999999999999999986 89999999998


Q ss_pred             ecCCCCcceeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhHHHHHh
Q 005257          517 MHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDAR  596 (705)
Q Consensus       517 ~~~~~~~~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~  596 (705)
                      .....     ....||+.|+|||++.++. +.++|||||||++|||++|..|+......            .+..     
T Consensus       230 ~~~~~-----~~~~gt~~y~aPE~~~~~~-~~~sDi~slG~~l~~l~~g~~~~~~~~~~------------~~~~-----  286 (681)
T 2pzi_A          230 RINSF-----GYLYGTPGFQAPEIVRTGP-TVATDIYTVGRTLAALTLDLPTRNGRYVD------------GLPE-----  286 (681)
T ss_dssp             ETTCC-----SCCCCCTTTSCTTHHHHCS-CHHHHHHHHHHHHHHHHSCCCEETTEECS------------SCCT-----
T ss_pred             hcccC-----CccCCCccccCHHHHcCCC-CCceehhhhHHHHHHHHhCCCCCcccccc------------cccc-----
Confidence            76543     3357999999999987654 89999999999999999999887642110            0000     


Q ss_pred             hhcCCCCCHHHHHHHHHHHHHcCCCCCCCCCC-HHHHHHHHHhc
Q 005257          597 LRAKGGFDEDEVERVLHLGLLCAYPDPRARPT-MRQVVKVLEGK  639 (705)
Q Consensus       597 l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs-~~evl~~L~~~  639 (705)
                          ..........+.+++..||+.||++||+ ++++.+.|.+.
T Consensus       287 ----~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~  326 (681)
T 2pzi_A          287 ----DDPVLKTYDSYGRLLRRAIDPDPRQRFTTAEEMSAQLTGV  326 (681)
T ss_dssp             ----TCHHHHHCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHH
T ss_pred             ----cccccccCHHHHHHHhhhccCChhhCCCHHHHHHHHHHHH
Confidence                0001122356889999999999999995 56666666543

>1gv9_A P58/ergic-53; lectin, carbohydrate binding; 1.46A {Rattus norvegicus} SCOP: b.29.1.13 PDB: 1r1z_A 3a4u_A 3lcp_A

Probab=100.00  E-value=4.8e-35  Score=299.59  Aligned_cols=205  Identities=14%  Similarity=0.172  Sum_probs=156.1

Q ss_pred             eeeEEeCCCCC-----CCeEEEcceEeecCcEEecCCCCCeEEEEEcCCCccccCCCCCcccceEEEEEEEEecCCCCCC
Q 005257           25 AVDFVFNGFNS-----SNLSLYGTATVESRILTLTNSTTFTIGRALYPSKIPTKRPNSSYVYPFSTSFIFAMAPYKGVLA   99 (705)
Q Consensus        25 ~~~f~f~~f~~-----~~~~~~g~a~~~~~~l~lt~~~~~~~Gr~~y~~pv~l~~~~~~~~~sF~t~F~f~i~~~~~~~~   99 (705)
                      ..||..+.+..     .+|.++|+|.+.++.|+||++..++.||+||+.|+++        +||+|+|+|+|.+++ ..+
T Consensus        33 ~~Sf~~P~~~~~~~~i~~w~~~G~a~i~~~~IrLT~~~~~~~G~~w~~~p~~~--------~sF~t~F~F~I~~~~-~~~  103 (260)
T 1gv9_A           33 KYSFKGPHLVQSDGTVPFWAHAGNAIPSADQIRIAPSLKSQRGSVWTKTKAAF--------ENWEVEVTFRVTGRG-RIG  103 (260)
T ss_dssp             GGCEECSSCSCTTSCBTTEEEEETCEECSSCEEEECSSTTCEEEEEESSCBCC--------SSEEEEEEEEEECSS-SCC
T ss_pred             ceeEcCccccCCCCccCCeEEcccEEeeCCEEEeCCCCCCCEEEEEECCCccc--------cCEEEEEEEEEecCC-CCC
Confidence            34665444431     6899999999988999999999999999999999954        799999999998864 368


Q ss_pred             CCceEEEEeeCCCCCCCCCCCcccccccCCCCCCCCcEEEEEeecccCCCCC-CC------CCCeeEEecCC-Ccccccc
Q 005257          100 GHGLVFLFVPFHGIKGATEAQHLGLFNRTNDGNSSNHVFGVEFDVFKNQEFN-DI------DENHVGIDVNS-LTSVSAH  171 (705)
Q Consensus       100 g~G~aF~~~~~~~~~~~~~g~~lGl~~~~~~~~~~~~~vaVEFDt~~n~~~~-d~------~~~Hvgidvns-~~S~~~~  171 (705)
                      ||||||+|+|...    ..|++||+.       ..++.|||||||+.|.++. +|      +++|+|||+|+ +.|.+..
T Consensus       104 gdGlAF~l~~~~~----~~g~~~G~~-------~~~~gvaVefDT~~N~~~~~~p~I~~~indg~~~~d~~~d~~s~~~~  172 (260)
T 1gv9_A          104 ADGLAIWYTENQG----LDGPVFGSA-------DMWNGVGIFFDSFDNDGKKNNPAIVVVGNNGQINYDHQNDGATQALA  172 (260)
T ss_dssp             CCEEEEEEESSCC----CEEEETTEC-------SCCEEEEEEEECCCC-----CCEEEEEEEESCCCCCHHHHHHHHCSE
T ss_pred             CCeEEEEEecCCC----CCCCccCCC-------CCCCEEEEEEECCCCCCCCCCCceEEEeCCCceEeecCCCcccceee
Confidence            9999999999743    368889983       3468899999999997531 23      45677777765 5554332


Q ss_pred             cccccCCCCCCCCCCCCCCCCCCCccccceeec-CCCcceEEEEEecCceEEEEEEEccCCCCCCCceeeeecCcccccc
Q 005257          172 AAGYWPDNQTDSSGSNSNSGTGDDEKSFKELKL-NNGKNYQVWIDYADSFINITMVEAGMKRPKRPLLSVPLNLSGVLED  250 (705)
Q Consensus       172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~g~~~~~~I~Y~~~~~~v~~~~~~~~~~~~~~ls~~vdl~~~l~~  250 (705)
                      .   +                        .+.+ ++|.+++|||+|+...|+|++.....+......++..+| ...||+
T Consensus       173 ~---c------------------------~~~~~n~g~~~~~~I~Y~~~~L~V~l~~~~~~~~~~~~~~~~vd-~~~LP~  224 (260)
T 1gv9_A          173 S---C------------------------QRDFRNKPYPVRAKITYYQKTLTVMINNGFTPDKNDYEFCAKVE-NMVIPT  224 (260)
T ss_dssp             E---E------------------------CCCCBSCSSCEEEEEEEETTEEEEEEECSSCCCTTCCEEEEEET-TCCCCS
T ss_pred             c---c------------------------ChhhccCCCcEEEEEEEECCEEEEEEeeccCCCCCcceEEEEEc-ccccCC
Confidence            1   1                        1123 258899999999777899999764222222346888899 677999


Q ss_pred             ceecccccccccccccceeeeeeeccc
Q 005257          251 EMYVGFTAATGQLVESHKILAWSFSNT  277 (705)
Q Consensus       251 ~~~vGfsastg~~~~~h~i~~wsf~~~  277 (705)
                      ++||||||+||...+.|+|++|+|..-
T Consensus       225 ~~~vGfSAaTG~~~e~hdIlsw~~~~l  251 (260)
T 1gv9_A          225 QGHFGISAATGGLADDHDVLSFLTFQL  251 (260)
T ss_dssp             SBEEEEEEECCSSCCEEEEEEEEEEEE
T ss_pred             CcEEEEEEeCCCCcceEEEEEEEEEEe
Confidence            999999999999999999999999763

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}

Probab=100.00  E-value=8.5e-36  Score=328.75  Aligned_cols=244  Identities=15%  Similarity=0.132  Sum_probs=186.0

Q ss_pred             hCCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCCc---hhHHHHHHHHHHhccCCC-CCcceeeee---------
Q 005257          363 TKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHEND---GGTRAFLAEISSLGRLKH-KSLVGLRGW---------  429 (705)
Q Consensus       363 t~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~---~~~~~~~~Ei~~l~~l~H-pniv~l~g~---------  429 (705)
                      +.+|...++||+|+||.||+|.+..+++.||||++.....   ...+.+.+|+.++..++| +|......+         
T Consensus        77 ~~~~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~  156 (413)
T 3dzo_A           77 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDL  156 (413)
T ss_dssp             CEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEE
T ss_pred             ceeEEEecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhh
Confidence            3457778899999999999999999999999999874432   236789999999999987 322211111         


Q ss_pred             ------------eeec----cCceEEEEeeCCCCChhHHHHhc----CCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCe
Q 005257          430 ------------CKRE----KGSLMLVYDYMENGSLDKWIFQC----DGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKV  489 (705)
Q Consensus       430 ------------~~~~----~~~~~lV~E~~~~gsL~~~L~~~----~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~i  489 (705)
                                  +...    ....+++|+++ +++|.+++...    .....+++..++.++.||+.||.|||+   ++|
T Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~---~~i  232 (413)
T 3dzo_A          157 VKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHH---YGL  232 (413)
T ss_dssp             EECCC---------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHH---TTE
T ss_pred             cccCCCCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHh---CCc
Confidence                        1110    12456777766 67999988532    223368899999999999999999998   999


Q ss_pred             eecCCCCCCeEEccCCCeeeeeeccceecCCCCcceeeeeeccccCCCcccc----------ccCCCCccccEEEEehhH
Q 005257          490 LHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVF----------SSGRASTQTDVFGFGILI  559 (705)
Q Consensus       490 iHrDLkp~NILld~~~~~kL~DFGla~~~~~~~~~~~~~~~gt~~y~APE~~----------~~~~~s~ksDVwS~Gvvl  559 (705)
                      +||||||+|||++.++.+||+|||+++.....    ....+| +.|+|||++          .+..++.++|||||||++
T Consensus       233 iHrDiKp~NILl~~~~~~kL~DFG~a~~~~~~----~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil  307 (413)
T 3dzo_A          233 VHTYLRPVDIVLDQRGGVFLTGFEHLVRDGAS----AVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAI  307 (413)
T ss_dssp             ECSCCCGGGEEECTTCCEEECCGGGCEETTEE----ECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHHH
T ss_pred             ccCCcccceEEEecCCeEEEEeccceeecCCc----cccCCC-CceeCchhhhccccccccccCcCCCchhhHHHHHHHH
Confidence            99999999999999999999999999865432    334577 999999999          555688999999999999


Q ss_pred             HHHhhCCCCCCCCCccHHHHHHHHHHhCchhHHHHHhhhcCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHH
Q 005257          560 LEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVK  634 (705)
Q Consensus       560 ~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~  634 (705)
                      |||++|+.||......               +.....+.....++    +.+.+++..||+.||++||++.++++
T Consensus       308 ~elltg~~Pf~~~~~~---------------~~~~~~~~~~~~~~----~~~~~li~~~l~~dP~~Rpt~~~~l~  363 (413)
T 3dzo_A          308 YWIWCADLPNTDDAAL---------------GGSEWIFRSCKNIP----QPVRALLEGFLRYPKEDRLLPLQAME  363 (413)
T ss_dssp             HHHHHSSCCCCTTGGG---------------SCSGGGGSSCCCCC----HHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred             HHHHHCCCCCCCcchh---------------hhHHHHHhhcccCC----HHHHHHHHHHccCChhhCcCHHHHHh
Confidence            9999999999764321               01111121112233    56889999999999999999988865

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A

Probab=100.00  E-value=4.4e-36  Score=314.50  Aligned_cols=232  Identities=15%  Similarity=0.144  Sum_probs=184.2

Q ss_pred             hCCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCCc---hhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEE
Q 005257          363 TKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHEND---GGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLML  439 (705)
Q Consensus       363 t~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~---~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~l  439 (705)
                      .++|...+.||+|+||.||+|.+..+++.||||++.....   ...+.+.+|+.++.+++||||+++++++.. ++..++
T Consensus        30 ~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~-~~~~~l  108 (286)
T 3uqc_A           30 NGRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHT-RAGGLV  108 (286)
T ss_dssp             TTTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEE-TTEEEE
T ss_pred             cCcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEE-CCcEEE
Confidence            3578999999999999999999998899999999976532   335789999999999999999999999876 678999


Q ss_pred             EEeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecC
Q 005257          440 VYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHG  519 (705)
Q Consensus       440 V~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~  519 (705)
                      ||||+++++|.+++..     .....++.+++.|++.||.|||+   ++|+||||||+|||++.++.+||+++       
T Consensus       109 v~e~~~g~~L~~~l~~-----~~~~~~~~~i~~ql~~aL~~lH~---~givH~Dikp~NIll~~~g~~kl~~~-------  173 (286)
T 3uqc_A          109 VAEWIRGGSLQEVADT-----SPSPVGAIRAMQSLAAAADAAHR---AGVALSIDHPSRVRVSIDGDVVLAYP-------  173 (286)
T ss_dssp             EEECCCEEEHHHHHTT-----CCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCSGGGEEEETTSCEEECSC-------
T ss_pred             EEEecCCCCHHHHHhc-----CCChHHHHHHHHHHHHHHHHHHH---CCCccCCCCcccEEEcCCCCEEEEec-------
Confidence            9999999999999843     23556789999999999999999   99999999999999999999999743       


Q ss_pred             CCCcceeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhhCCCCCCCCCccH-HHHHHHHHHhCchhHHHHHhhh
Q 005257          520 HGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNL-VEMVWELMVQGKLLDALDARLR  598 (705)
Q Consensus       520 ~~~~~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~-~~~v~~~~~~~~~~~~id~~l~  598 (705)
                                    +|++|       ++.++|||||||++|||++|+.||....... .... .....+.....  ..+ 
T Consensus       174 --------------~~~~~-------~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~~-~~~~~~~~~~~--~~~-  228 (286)
T 3uqc_A          174 --------------ATMPD-------ANPQDDIRGIGASLYALLVNRWPLPEAGVRSGLAPA-ERDTAGQPIEP--ADI-  228 (286)
T ss_dssp             --------------CCCTT-------CCHHHHHHHHHHHHHHHHHSEECSCCCSBCCCSEEC-CBCTTSCBCCH--HHH-
T ss_pred             --------------cccCC-------CCchhHHHHHHHHHHHHHHCCCCCCcCCcchhhHHH-HHHhccCCCCh--hhc-
Confidence                          34443       7889999999999999999999998644210 0000 00000000000  000 


Q ss_pred             cCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHhccc
Q 005257          599 AKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLEGKIE  641 (705)
Q Consensus       599 ~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~  641 (705)
                           .......+.+++..||+.||++| |+.|+++.|+....
T Consensus       229 -----~~~~~~~l~~li~~~l~~dP~~R-s~~el~~~L~~~~~  265 (286)
T 3uqc_A          229 -----DRDIPFQISAVAARSVQGDGGIR-SASTLLNLMQQATA  265 (286)
T ss_dssp             -----CTTSCHHHHHHHHHHHCTTSSCC-CHHHHHHHHHHHHC
T ss_pred             -----ccCCCHHHHHHHHHHcccCCccC-CHHHHHHHHHHHhc
Confidence                 11223568899999999999999 99999999987654

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*

Probab=100.00  E-value=2.6e-35  Score=310.18  Aligned_cols=229  Identities=19%  Similarity=0.301  Sum_probs=179.7

Q ss_pred             CCCCcc-eEEeecCceEEEEEEEcCCCeEEEEEEeccCCchhHHHHHHHHHHh-ccCCCCCcceeeeeeee---ccCceE
Q 005257          364 KGFSEE-NVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSL-GRLKHKSLVGLRGWCKR---EKGSLM  438 (705)
Q Consensus       364 ~~f~~~-~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~~~~~~~~~Ei~~l-~~l~Hpniv~l~g~~~~---~~~~~~  438 (705)
                      ++|... +.||+|+||.||+|.+..+++.||||+++.     ...+.+|+.++ +.++||||+++++++..   ....++
T Consensus        17 ~~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~-----~~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~   91 (299)
T 3m2w_A           17 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD-----CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLL   91 (299)
T ss_dssp             GTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEC-----SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEE
T ss_pred             cchhhcCcccccCCCeEEEEEEEcCCCcEEEEEEecc-----cHHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCceEE
Confidence            456665 789999999999999998999999999853     24577888887 55699999999998764   245689


Q ss_pred             EEEeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEcc---CCCeeeeeeccc
Q 005257          439 LVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDK---EMNGRLGDFGLA  515 (705)
Q Consensus       439 lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~---~~~~kL~DFGla  515 (705)
                      +||||+++|+|.+++...... .+++.+++.++.|++.||.|||+   .+|+||||||+|||++.   ++.+||+|||++
T Consensus        92 lv~e~~~~~~L~~~l~~~~~~-~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a  167 (299)
T 3m2w_A           92 IVMECLDGGELFSRIQDRGDQ-AFTEREASEIMKSIGEAIQYLHS---INIAHRDVKPENLLYTSKRPNAILKLTDFGFA  167 (299)
T ss_dssp             EEECCCCSCBHHHHHHHCTTC-CCBHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEESSSSTTCCEEECCCTTC
T ss_pred             EEEeecCCCcHHHHHHhccCC-CCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCHHHEEEecCCCCCcEEEeccccc
Confidence            999999999999999875433 69999999999999999999999   99999999999999998   788999999998


Q ss_pred             eecCCCCcceeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhHHHHH
Q 005257          516 RMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDA  595 (705)
Q Consensus       516 ~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~  595 (705)
                      +...                       +..++.++|||||||++|||++|+.||.......       ... .....+  
T Consensus       168 ~~~~-----------------------~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~-------~~~-~~~~~~--  214 (299)
T 3m2w_A          168 KETT-----------------------GEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLA-------ISP-GMKTRI--  214 (299)
T ss_dssp             EECT-----------------------TCGGGGHHHHHHHHHHHHHHHHSSCSCCC--------------C-CSCCSS--
T ss_pred             cccc-----------------------cccCCchhhHHHHHHHHHHHHHCCCCCCCCcchh-------hhH-HHHHHH--
Confidence            7532                       2346789999999999999999999997543210       000 000000  


Q ss_pred             hhhcCCCCCH----HHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 005257          596 RLRAKGGFDE----DEVERVLHLGLLCAYPDPRARPTMRQVVKV  635 (705)
Q Consensus       596 ~l~~~~~~~~----~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  635 (705)
                       .......+.    .....+.+++..||+.||++|||+.|++++
T Consensus       215 -~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~h  257 (299)
T 3m2w_A          215 -RMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNH  257 (299)
T ss_dssp             -CTTCCSSCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred             -hhccccCCchhcccCCHHHHHHHHHHcccChhhCCCHHHHhcC
Confidence             000011111    124568899999999999999999999984

>1qmo_E Mannose binding lectin, FRIL; crosslink, hematopoietic progenitor, sugar complex; HET: MAN; 3.5A {Dolichos lab lab} SCOP: b.29.1.1

Probab=100.00  E-value=5.4e-35  Score=264.15  Aligned_cols=112  Identities=35%  Similarity=0.523  Sum_probs=101.2

Q ss_pred             CcEEEEEeecccCCCCCCCCCCeeEEecCCCcccccccccccCCCCCCCCCCCCCCCCCCCccccceeecCCCcceEEEE
Q 005257          135 NHVFGVEFDVFKNQEFNDIDENHVGIDVNSLTSVSAHAAGYWPDNQTDSSGSNSNSGTGDDEKSFKELKLNNGKNYQVWI  214 (705)
Q Consensus       135 ~~~vaVEFDt~~n~~~~d~~~~Hvgidvns~~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~I  214 (705)
                      ||+|||||||++|++|+||++|||||||||+.|.++++                             ++|.+|+.++|||
T Consensus         1 n~~vAVEFDT~~N~e~~Dp~~nHVGIdvNsi~S~~s~~-----------------------------~~l~sG~~~~v~I   51 (133)
T 1qmo_E            1 SNVVAVEFDTYLNPDYGDPNYIHIGIDVNSIRSKVTAK-----------------------------WDWQNGKIATAHI   51 (133)
T ss_dssp             CCCEEEEEECSCCGGGTCCSSCEEEEEESSSSCSEEEE-----------------------------CCCCTTSCEEEEE
T ss_pred             CCEEEEEEeCCcCccccCCCCCeeEEecccccccceee-----------------------------eEEcCCCEEEEEE
Confidence            58999999999999988999999999999999988743                             3477999999999


Q ss_pred             Ee--cCceEEEEEEEccCCCCCCCceeeeecCccccccceecccccccccccccceeeeeeecccc
Q 005257          215 DY--ADSFINITMVEAGMKRPKRPLLSVPLNLSGVLEDEMYVGFTAATGQLVESHKILAWSFSNTK  278 (705)
Q Consensus       215 ~Y--~~~~~~v~~~~~~~~~~~~~~ls~~vdl~~~l~~~~~vGfsastg~~~~~h~i~~wsf~~~~  278 (705)
                      +|  ..++|+|++++.+.   ..|+|+..+||+++||++||||||||||...+.|+|++|+|++..
T Consensus        52 ~Yd~~~~~L~V~l~~~~~---~~p~ls~~vdLs~~l~e~v~VGFSAsTG~~~~~h~IlsWsF~s~l  114 (133)
T 1qmo_E           52 SYNSVSKRLSVTSYYAGS---KPATLSYDIELHTVLPEWVRVGLSASTGQDKERNTVHSWSFTSSL  114 (133)
T ss_dssp             EEETTTTEEEEEEECSSS---CCEEEEEECCGGGTSCSEEEEEEEEECSSSCCEEEEEEEEEEEEE
T ss_pred             EEeCCCcEEEEEEccCCC---ccceEEEeechHHhccccEEEEEEeccCCCcceeEEEEEEEEeeC
Confidence            99  56689999987654   278999999999999999999999999999999999999999864

>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A

Probab=100.00  E-value=1.5e-35  Score=317.28  Aligned_cols=239  Identities=18%  Similarity=0.199  Sum_probs=181.7

Q ss_pred             hCCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCC--------chhHHHHHHHHHHhccCC---------CCCcce
Q 005257          363 TKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHEN--------DGGTRAFLAEISSLGRLK---------HKSLVG  425 (705)
Q Consensus       363 t~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~--------~~~~~~~~~Ei~~l~~l~---------Hpniv~  425 (705)
                      .++|...+.||+|+||+||+|++  +++.||||++....        ....+.+.+|+.++++++         ||||++
T Consensus        19 ~~~y~~~~~lG~G~~g~V~~~~~--~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~   96 (336)
T 2vuw_A           19 TEKLQRCEKIGEGVFGEVFQTIA--DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIG   96 (336)
T ss_dssp             HHHHHTCEEEEEETTEEEEEEEE--TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCC
T ss_pred             cccchheeeecccCceEEEEEEe--CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhh
Confidence            35677899999999999999998  57999999997653        223477889999988886         666666


Q ss_pred             eeeee-----------------ee------------ccCceEEEEeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHH
Q 005257          426 LRGWC-----------------KR------------EKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAA  476 (705)
Q Consensus       426 l~g~~-----------------~~------------~~~~~~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~  476 (705)
                      +.+.+                 ..            ..+.+++||||+++|++.+.+.+    ..+++.++..++.||+.
T Consensus        97 l~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~----~~~~~~~~~~i~~qi~~  172 (336)
T 2vuw_A           97 LNSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRT----KLSSLATAKSILHQLTA  172 (336)
T ss_dssp             EEEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTT----TCCCHHHHHHHHHHHHH
T ss_pred             hcceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHh----cCCCHHHHHHHHHHHHH
Confidence            65543                 22            15689999999999977666633    26899999999999999


Q ss_pred             HHHHHh-cCCCCCeeecCCCCCCeEEccCC--------------------CeeeeeeccceecCCCCcceeeeeeccccC
Q 005257          477 GVLYLH-EGWEKKVLHRDIKSSNVLLDKEM--------------------NGRLGDFGLARMHGHGQVASTTRVVGTVGY  535 (705)
Q Consensus       477 gL~yLH-~~~~~~iiHrDLkp~NILld~~~--------------------~~kL~DFGla~~~~~~~~~~~~~~~gt~~y  535 (705)
                      ||.||| +   ++|+||||||+|||++.++                    .+||+|||+|+.....      ..+||+.|
T Consensus       173 aL~~lH~~---~~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~~------~~~gt~~y  243 (336)
T 2vuw_A          173 SLAVAEAS---LRFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDG------IVVFCDVS  243 (336)
T ss_dssp             HHHHHHHH---HCCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEETT------EEECCCCT
T ss_pred             HHHHHHHh---CCEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCCC------cEEEeecc
Confidence            999999 8   9999999999999999887                    8999999999876532      34899999


Q ss_pred             CCccccccCCCCccccEEEEehh-HHHHhhCCCCCCCCCccHHHHHHHHHHhCchhHHHHHhhhcCC----CCCHHHHHH
Q 005257          536 LAPEVFSSGRASTQTDVFGFGIL-ILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRAKG----GFDEDEVER  610 (705)
Q Consensus       536 ~APE~~~~~~~s~ksDVwS~Gvv-l~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~l~~~~----~~~~~~~~~  610 (705)
                      ||||++.+.. +.++||||++++ .+++++|..||...     .|....      .+.+........    .........
T Consensus       244 ~aPE~~~g~~-~~~~Diwsl~~~~~~~~~~g~~p~~~~-----~~~~~~------~~~~~~~~~~~~~~~~~~~~~~s~~  311 (336)
T 2vuw_A          244 MDEDLFTGDG-DYQFDIYRLMKKENNNRWGEYHPYSNV-----LWLHYL------TDKMLKQMTFKTKCNTPAMKQIKRK  311 (336)
T ss_dssp             TCSGGGCCCS-SHHHHHHHHHHHHHTTCTTSCCTHHHH-----HHHHHH------HHHHHHTCCCSSCCCSHHHHHHHHH
T ss_pred             cChhhhcCCC-ccceehhhhhCCCCcccccccCCCcch-----hhhhHH------HHhhhhhhccCcccchhhhhhcCHH
Confidence            9999998765 899999998777 77889999987421     110000      001110000001    112345678


Q ss_pred             HHHHHHHcCCCCCCCCCCHHHHH
Q 005257          611 VLHLGLLCAYPDPRARPTMRQVV  633 (705)
Q Consensus       611 l~~l~~~Cl~~dP~~RPs~~evl  633 (705)
                      +.+++..||+.|     |+.|++
T Consensus       312 ~~dli~~~L~~d-----sa~e~l  329 (336)
T 2vuw_A          312 IQEFHRTMLNFS-----SATDLL  329 (336)
T ss_dssp             HHHHHHHGGGSS-----SHHHHH
T ss_pred             HHHHHHHHhccC-----CHHHHH
Confidence            999999999866     888887

>1nls_A Concanavalin A; lectin, agglutinin; 0.94A {Canavalia ensiformis} SCOP: b.29.1.1 PDB: 1bxh_A* 1apn_A 1ces_A 1cjp_A* 1c57_A 1cvn_A* 1con_A 1dq1_A 1dq2_A 1dq4_A 1dq5_A 1dq6_A 1enq_A 1enr_A 1ens_A 1gic_A* 1dq0_A 1hqw_A 1gkb_A* 1i3h_A ...

Probab=99.97  E-value=2.4e-31  Score=265.94  Aligned_cols=113  Identities=28%  Similarity=0.480  Sum_probs=102.0

Q ss_pred             CCcEEEEEeecccCCCCCCCCCCeeEEecCCCcccccccccccCCCCCCCCCCCCCCCCCCCccccceeecCCCcceEEE
Q 005257          134 SNHVFGVEFDVFKNQEFNDIDENHVGIDVNSLTSVSAHAAGYWPDNQTDSSGSNSNSGTGDDEKSFKELKLNNGKNYQVW  213 (705)
Q Consensus       134 ~~~~vaVEFDt~~n~~~~d~~~~Hvgidvns~~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~  213 (705)
                      +||+|||||||++|.+|+||++|||||||||++|+++++                             +++.+|+.++||
T Consensus         1 ~n~~vAVEFDT~~n~~~~Dp~~nHVGIdvNs~~S~~~~~-----------------------------~~l~~g~~~~v~   51 (237)
T 1nls_A            1 ADTIVAVELDTYPNTDIGDPSYPHIGIDIKSVRSKKTAK-----------------------------WNMQNGKVGTAH   51 (237)
T ss_dssp             CCCEEEEEEECSCCGGGTCCSSCEEEEEESSSSCSEEEE-----------------------------CCCCTTCEEEEE
T ss_pred             CCCEEEEEEeCCCCcccCCCCCCeeeEecCCcccccccc-----------------------------ccccCCCEEEEE
Confidence            379999999999999999999999999999999988753                             347799999999


Q ss_pred             EEe--cCceEEEEEEEccCCCCCCCceeeeecCccccccceecccccccccccccceeeeeeecccc
Q 005257          214 IDY--ADSFINITMVEAGMKRPKRPLLSVPLNLSGVLEDEMYVGFTAATGQLVESHKILAWSFSNTK  278 (705)
Q Consensus       214 I~Y--~~~~~~v~~~~~~~~~~~~~~ls~~vdl~~~l~~~~~vGfsastg~~~~~h~i~~wsf~~~~  278 (705)
                      |+|  ..++|+|++++.+.   ..|+|+..|||+++|||+||||||||||...|.|+|++|+|++..
T Consensus        52 I~Yd~~~~~L~V~l~~~~~---~~~~ls~~vdLs~~l~e~~~VGFSAsTG~~~~~h~IlsWsF~s~~  115 (237)
T 1nls_A           52 IIYNSVDKRLSAVVSYPNA---DSATVSYDVDLDNVLPEWVRVGLSASTGLYKETNTILSWSFTSKL  115 (237)
T ss_dssp             EEEETTTTEEEEEEECTTS---CCEEEEEECCGGGTSCSEEEEEEEEECSSSCCCCEEEEEEEEEEE
T ss_pred             EEEeCCCCEEEEEEecCCC---CcceEEEeeChHHhCccccEEEEEeccCCcceeeeeEEEEEEecc
Confidence            999  56689999986543   568999999999999999999999999999999999999999875

>1qmo_A Mannose binding lectin, FRIL; crosslink, hematopoietic progenitor, sugar complex; HET: MAN; 3.5A {Dolichos lab lab} SCOP: b.29.1.1

Probab=99.96  E-value=8.2e-29  Score=218.61  Aligned_cols=103  Identities=24%  Similarity=0.417  Sum_probs=94.5

Q ss_pred             ceeeEEeCCCC--CCCeEEEcceEeecCcEEecCCCC------CeEEEEEcCCCccccCCCCCcccceEEEEEEEEecCC
Q 005257           24 SAVDFVFNGFN--SSNLSLYGTATVESRILTLTNSTT------FTIGRALYPSKIPTKRPNSSYVYPFSTSFIFAMAPYK   95 (705)
Q Consensus        24 ~~~~f~f~~f~--~~~~~~~g~a~~~~~~l~lt~~~~------~~~Gr~~y~~pv~l~~~~~~~~~sF~t~F~f~i~~~~   95 (705)
                      ..++|+|++|+  ..||+|+|||++.+|.|+||++..      +++|||+|++||+|||+ +|++|||+|+|+|.|.+.+
T Consensus         2 ~~~~F~f~~F~~~~~nl~l~G~A~v~~g~l~LT~~~~~g~~~~~s~Gra~Y~~Pv~l~d~-tg~vaSFsT~F~F~I~~~~   80 (113)
T 1qmo_A            2 QSLSFSFTKFDPNQEDLIFQGHATSTNNVLQVTKLDSAGNPVSSSAGRVLYSAPLRLWED-SAVLTSFDTIINFEISTPY   80 (113)
T ss_dssp             EEEEEEESSCCSSCTTEEEEETCEEETTEEECSCBCTTSCBCSSCEEEEEESSCEECCCT-TEEEEEEEEEEEEEEECSS
T ss_pred             cceEEEcCCCCCCCCCeEEecceEcCCCceEeCCCCCCCcccCCcEEEEEeCCCEEeeCC-CCCEEeeEEEEEEEEecCC
Confidence            46899999998  589999999999889999999775      79999999999999999 9999999999999999887


Q ss_pred             CCCCCCceEEEEeeCCCCCCCCCCCcccccccC
Q 005257           96 GVLAGHGLVFLFVPFHGIKGATEAQHLGLFNRT  128 (705)
Q Consensus        96 ~~~~g~G~aF~~~~~~~~~~~~~g~~lGl~~~~  128 (705)
                      ...+||||||||+|....|. +.||||||||.+
T Consensus        81 ~~~~gdGlAF~lap~~~~p~-s~g~~LGL~n~~  112 (113)
T 1qmo_A           81 TSRIADGLAFFIAPPDSVIS-YHGGFLGLFPNA  112 (113)
T ss_dssp             SSCCCCEEEEEEECTTCCCC-CCGGGTTTCSSC
T ss_pred             CCCCCCeEEEEecCCCCCCC-CCccccccccCC
Confidence            77789999999999877777 899999999864

>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*

Probab=99.95  E-value=7.8e-29  Score=283.31  Aligned_cols=185  Identities=15%  Similarity=0.081  Sum_probs=130.6

Q ss_pred             EeecCceEEEEEEEcCCCeEEEEEEeccCC----------chhHHHHHHHHHHhccC-CCCCcceeeeeeeeccCceEEE
Q 005257          372 IGVGGNGKVYKGVLEGGGAEIAVKRISHEN----------DGGTRAFLAEISSLGRL-KHKSLVGLRGWCKREKGSLMLV  440 (705)
Q Consensus       372 LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~----------~~~~~~~~~Ei~~l~~l-~Hpniv~l~g~~~~~~~~~~lV  440 (705)
                      .+.|+.|.+.+++....|+.+|||.+....          ....++|.+|+++|+++ .|+||+++++++.+ ++.+|||
T Consensus       242 ~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed-~~~~yLV  320 (569)
T 4azs_A          242 PYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGEN-AQSGWLV  320 (569)
T ss_dssp             -C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEEC-SSEEEEE
T ss_pred             cccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEE-CCEEEEE
Confidence            456666666666555567889999986541          12346799999999999 79999999998876 7789999


Q ss_pred             EeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecCC
Q 005257          441 YDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGH  520 (705)
Q Consensus       441 ~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~~  520 (705)
                      |||++|++|.++|.+..   .++..   +|+.||+.||+|||+   ++||||||||+||||++++++||+|||+|+....
T Consensus       321 MEyv~G~~L~d~i~~~~---~l~~~---~I~~QIl~AL~ylH~---~GIIHRDIKPeNILL~~dg~vKL~DFGlAr~~~~  391 (569)
T 4azs_A          321 MEKLPGRLLSDMLAAGE---EIDRE---KILGSLLRSLAALEK---QGFWHDDVRPWNVMVDARQHARLIDFGSIVTTPQ  391 (569)
T ss_dssp             EECCCSEEHHHHHHTTC---CCCHH---HHHHHHHHHHHHHHH---TTCEESCCCGGGEEECTTSCEEECCCTTEESCC-
T ss_pred             EecCCCCcHHHHHHhCC---CCCHH---HHHHHHHHHHHHHHH---CCceeccCchHhEEECCCCCEEEeecccCeeCCC
Confidence            99999999999997643   46553   589999999999999   9999999999999999999999999999987654


Q ss_pred             CCcceeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhhCCCC
Q 005257          521 GQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRP  568 (705)
Q Consensus       521 ~~~~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~P  568 (705)
                      ... .....+||++|||||++.+ .+..++|+||+|++++++.++..+
T Consensus       392 ~~~-~~~t~vGTp~YmAPE~l~g-~~~~~~d~~s~g~~~~~l~~~~~~  437 (569)
T 4azs_A          392 DCS-WPTNLVQSFFVFVNELFAE-NKSWNGFWRSAPVHPFNLPQPWSN  437 (569)
T ss_dssp             --C-CSHHHHHHHHHHHHHHC------------------CCCCTTHHH
T ss_pred             CCc-cccCceechhhccHHHhCC-CCCCcccccccccchhhhccccch
Confidence            332 2334689999999999875 567789999999999988776544

>2a6y_A EMP47P (FORM1); beta sandwich, carbohydrate binding protein, cargo receptor, structural genomics, NPPSFA; 1.42A {Saccharomyces cerevisiae} SCOP: b.29.1.13

Probab=99.92  E-value=4.8e-25  Score=224.39  Aligned_cols=184  Identities=17%  Similarity=0.205  Sum_probs=138.3

Q ss_pred             CCeEEEcceEeecCcEEecCCCCCeEEEEEcCCCccccCCCCCcccceEEEEEEEEecCCCCCCCCceEEEEeeCCCCCC
Q 005257           36 SNLSLYGTATVESRILTLTNSTTFTIGRALYPSKIPTKRPNSSYVYPFSTSFIFAMAPYKGVLAGHGLVFLFVPFHGIKG  115 (705)
Q Consensus        36 ~~~~~~g~a~~~~~~l~lt~~~~~~~Gr~~y~~pv~l~~~~~~~~~sF~t~F~f~i~~~~~~~~g~G~aF~~~~~~~~~~  115 (705)
                      .+|.+.|+|.+.++.|+||++ .++.|++|.+.|+++       .++|+|+|+|+|.+... .+||||||+++|....| 
T Consensus        31 ~~w~~~G~a~v~~~~IrLTp~-~~s~G~iW~~~p~~~-------~~~f~~~f~FrI~g~~~-~~gdGlAfwlt~~~~~~-  100 (256)
T 2a6y_A           31 NNWQTGEQASLEEGRIVLTSN-QNSKGSLWLKQGFDL-------KDSFTMEWTFRSVGYSG-QTDGGISFWFVQDSNIP-  100 (256)
T ss_dssp             TTEEEEETCEEETBEEECCCS-TTCEEEEEESSCEEE-------SSCEEEEEEEEEESCCS-CCSCEEEEEEEECSSSC-
T ss_pred             CCeEEccceEEeCCEEEECCC-CCceEEEeeCCCCcc-------cCCEEEEEEEEEecCCC-CCCCeEEEEEeCCCCcc-
Confidence            699999999999999999999 678999877777764       46899999999987643 37999999999975432 


Q ss_pred             CCCCCcccccccCCCCCCCCcEEEEEeecccCCCCCCCC------CCeeEEecCCCcccccccccccCCCCCCCCCCCCC
Q 005257          116 ATEAQHLGLFNRTNDGNSSNHVFGVEFDVFKNQEFNDID------ENHVGIDVNSLTSVSAHAAGYWPDNQTDSSGSNSN  189 (705)
Q Consensus       116 ~~~g~~lGl~~~~~~~~~~~~~vaVEFDt~~n~~~~d~~------~~Hvgidvns~~S~~~~~~~~~~~~~~~~~~~~~~  189 (705)
                       ..|+.+|.++       ....+||||||+.|.   .|.      +.|+++|.+++.+.+..   .+             
T Consensus       101 -~~g~~~G~~~-------~f~GlaV~fDT~~n~---~p~i~~~~Ndg~~~~d~~~~~~~~~~---~c-------------  153 (256)
T 2a6y_A          101 -RDKQLYNGPV-------NYDGLQLLVDNNGPL---GPTLRGQLNDGQKPVDKTKIYDQSFA---SC-------------  153 (256)
T ss_dssp             -CCCTBTTBCT-------TCEEEEEEEESCSTT---CSEEEEEEEESSSCCCGGGHHHHCSE---EE-------------
T ss_pred             -cCCcccCcCC-------CCCEEEEEEECCCCC---CceEEEEECCCceecccCCCccccee---cc-------------
Confidence             5788889854       346799999999873   343      66778877764343321   11             


Q ss_pred             CCCCCCccccceeec-CCCcceEEEEEec---CceEEEEEEEccCCCCCCCceeeeecCccc-cccce-ecccccccc--
Q 005257          190 SGTGDDEKSFKELKL-NNGKNYQVWIDYA---DSFINITMVEAGMKRPKRPLLSVPLNLSGV-LEDEM-YVGFTAATG--  261 (705)
Q Consensus       190 ~~~~~~~~~~~~~~l-~~g~~~~~~I~Y~---~~~~~v~~~~~~~~~~~~~~ls~~vdl~~~-l~~~~-~vGfsastg--  261 (705)
                      .           ..+ ++|.+.+|||+|.   ...++|.+.  +     .    .-+++..+ ||+++ ||||||+||  
T Consensus       154 ~-----------~~~rn~~~~~~v~I~Y~~~~~~~L~V~i~--~-----~----~c~~~~~v~LP~~~~~~GfSAaTG~~  211 (256)
T 2a6y_A          154 L-----------MGYQDSSVPSTIRVTYDLEDDNLLKVQVD--N-----K----VCFQTRKVRFPSGSYRIGVTAQNGAV  211 (256)
T ss_dssp             E-----------CCCTTCSSCEEEEEEEEGGGTSEEEEEET--T-----E----EEEEESCEECCSEEEEEEEEEECCSG
T ss_pred             e-----------eecccCCCcEEEEEEEecCCCcEEEEEEc--C-----E----EEEEECcEEeCCCCeEEEEEEeCCCC
Confidence            1           112 3788999999996   556666663  2     1    12344444 88887 799999999  


Q ss_pred             -cccccceeeeeeecccc
Q 005257          262 -QLVESHKILAWSFSNTK  278 (705)
Q Consensus       262 -~~~~~h~i~~wsf~~~~  278 (705)
                       ...+.|.|++|+|.+..
T Consensus       212 ~~~~d~hdIls~~~~~~~  229 (256)
T 2a6y_A          212 NNNAESFEIFKMQFFNGV  229 (256)
T ss_dssp             GGCCCEEEEEEEEEEESC
T ss_pred             CCCcceEEEEEEEEEecc
Confidence             88999999999999843

>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*

Probab=99.92  E-value=2.5e-26  Score=261.03  Aligned_cols=186  Identities=16%  Similarity=0.182  Sum_probs=144.3

Q ss_pred             CCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCCc--h------hHHHHHHHHHHhccCCCCCcceeeeeeeeccCce
Q 005257          366 FSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHEND--G------GTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSL  437 (705)
Q Consensus       366 f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~--~------~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~  437 (705)
                      +...++||+|+||.||+|..  .+..+++|+......  .      ..+.+.+|++++++++||||+++..++.. ....
T Consensus       338 ~~~~~~LG~G~fg~Vy~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~-~~~~  414 (540)
T 3en9_A          338 KIPEHLIGKGAEADIKRDSY--LDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVD-LDNK  414 (540)
T ss_dssp             ----------CCEEEEEEEC--SSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEE-TTTT
T ss_pred             CCCCCEEeeCCCEEEEEEEE--CCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEe-CCcc
Confidence            34567899999999999954  367899998644321  1      13458999999999999999976666664 5677


Q ss_pred             EEEEeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeecccee
Q 005257          438 MLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARM  517 (705)
Q Consensus       438 ~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~  517 (705)
                      +|||||+++++|.+++..           +..++.|+++||.|||+   ++|+||||||+|||++.  ++||+|||+++.
T Consensus       415 ~lVmE~~~ggsL~~~l~~-----------~~~i~~qi~~aL~~LH~---~gIiHrDiKp~NILl~~--~~kL~DFGla~~  478 (540)
T 3en9_A          415 RIMMSYINGKLAKDVIED-----------NLDIAYKIGEIVGKLHK---NDVIHNDLTTSNFIFDK--DLYIIDFGLGKI  478 (540)
T ss_dssp             EEEEECCCSEEHHHHSTT-----------CTHHHHHHHHHHHHHHH---TTEECTTCCTTSEEESS--SEEECCCTTCEE
T ss_pred             EEEEECCCCCCHHHHHHH-----------HHHHHHHHHHHHHHHHH---CcCccCCCCHHHEEECC--eEEEEECccCEE
Confidence            999999999999999854           56899999999999998   99999999999999998  999999999998


Q ss_pred             cCCCCcce------eeeeeccccCCCcccccc--CCCCccccEEEEehhHHHHhhCCCCCC
Q 005257          518 HGHGQVAS------TTRVVGTVGYLAPEVFSS--GRASTQTDVFGFGILILEVLSGRRPIE  570 (705)
Q Consensus       518 ~~~~~~~~------~~~~~gt~~y~APE~~~~--~~~s~ksDVwS~Gvvl~ElltG~~Pf~  570 (705)
                      ........      .....||+.|||||++..  ..|+..+|+||..+-.++-+.++.+|.
T Consensus       479 ~~~~~~~~~~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~r~rY~  539 (540)
T 3en9_A          479 SNLDEDKAVDLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVERRARYV  539 (540)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTCSCCC
T ss_pred             CCCccccccchhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhccccC
Confidence            76532221      134689999999999976  567888999998888888877776663

>1nls_A Concanavalin A; lectin, agglutinin; 0.94A {Canavalia ensiformis} SCOP: b.29.1.1 PDB: 1bxh_A* 1apn_A 1ces_A 1cjp_A* 1c57_A 1cvn_A* 1con_A 1dq1_A 1dq2_A 1dq4_A 1dq5_A 1dq6_A 1enq_A 1enr_A 1ens_A 1gic_A* 1dq0_A 1hqw_A 1gkb_A* 1i3h_A ...

Probab=99.91  E-value=2.7e-24  Score=214.97  Aligned_cols=103  Identities=28%  Similarity=0.484  Sum_probs=92.4

Q ss_pred             ceeeEEeCCCCC--CCeEEEcceEee-cCcEEecCCCC------CeEEEEEcCCCccccCCCCCcccceEEEEEEEEecC
Q 005257           24 SAVDFVFNGFNS--SNLSLYGTATVE-SRILTLTNSTT------FTIGRALYPSKIPTKRPNSSYVYPFSTSFIFAMAPY   94 (705)
Q Consensus        24 ~~~~f~f~~f~~--~~~~~~g~a~~~-~~~l~lt~~~~------~~~Gr~~y~~pv~l~~~~~~~~~sF~t~F~f~i~~~   94 (705)
                      ..++|+|++|..  +||+|+|||++. +|.|+||++..      +++|||+|++||+|||+ +++++||+|+|+|.|.+.
T Consensus       124 ~~~~F~~~~F~~~~~nl~l~G~A~v~~~g~l~LT~~~~n~~~~~~~~Gra~Y~~Pv~lwd~-~~~vaSFsT~F~F~I~~~  202 (237)
T 1nls_A          124 NALHFMFNQFSKDQKDLILQGDATTGTDGNLELTRVSSNGSPQGSSVGRALFYAPVHIWES-SAVVASFEATFTFLIKSP  202 (237)
T ss_dssp             EEEEEEESCCCTTCTTEEEEETCEEEETTEEESSCBCTTSCBCSSCEEEEEESSCEECCCT-TEEEEEEEEEEEEECCCS
T ss_pred             ccchhhhccccccCCCeEEccceEecCCCceEecCCccCCccccCceEEEEeCCCEEeecC-CCCEeeeEEEEEEEEecC
Confidence            467999999974  699999999996 79999999763      68999999999999997 889999999999999876


Q ss_pred             CCCCCCCceEEEEeeCC-CCCCCCCCCcccccccC
Q 005257           95 KGVLAGHGLVFLFVPFH-GIKGATEAQHLGLFNRT  128 (705)
Q Consensus        95 ~~~~~g~G~aF~~~~~~-~~~~~~~g~~lGl~~~~  128 (705)
                      + ..+||||||||+|.. .+|.+++||||||||.+
T Consensus       203 ~-~~~g~GlAF~lap~~~~~p~~~~g~~LGL~n~~  236 (237)
T 1nls_A          203 D-SHPADGIAFFISNIDSSIPSGSTGRLLGLFPDA  236 (237)
T ss_dssp             S-SSCCCEEEEEEECTTCCCCTTCCGGGTTTCSSC
T ss_pred             C-CCCCccEEEEECCCCCCCCCCCCcCeeccccCC
Confidence            3 458999999999987 58889999999999965

>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*

Probab=99.86  E-value=8.6e-22  Score=205.37  Aligned_cols=148  Identities=17%  Similarity=0.140  Sum_probs=120.1

Q ss_pred             HHhCCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCCc------------------hhHHHHHHHHHHhccCCCCC
Q 005257          361 AATKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHEND------------------GGTRAFLAEISSLGRLKHKS  422 (705)
Q Consensus       361 ~at~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~------------------~~~~~~~~Ei~~l~~l~Hpn  422 (705)
                      .....|...+.||+|+||.||+|.+ .+++.||||.++....                  .....+.+|+.++++++  |
T Consensus        87 ~~~~~~~~~~~iG~G~~g~Vy~~~~-~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~--~  163 (282)
T 1zar_A           87 RSGKVDAIGKLMGEGKESAVFNCYS-EKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQ--G  163 (282)
T ss_dssp             HTTSCSEEEEEEEECSSEEEEEEEE-TTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTT--T
T ss_pred             hCCeEEEecCEeccCCCceEEEEEe-CCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhcc--C
Confidence            3445566779999999999999999 7799999999864321                  13456899999999999  5


Q ss_pred             cceeeeeeeeccCceEEEEeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEc
Q 005257          423 LVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLD  502 (705)
Q Consensus       423 iv~l~g~~~~~~~~~~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld  502 (705)
                       +++.+++..  +..++||||+++|+|.+ +.       .  .+...++.|++.||.|||+   .+|+||||||+|||++
T Consensus       164 -~~v~~~~~~--~~~~lvmE~~~g~~L~~-l~-------~--~~~~~i~~qi~~~l~~lH~---~giiHrDlkp~NILl~  227 (282)
T 1zar_A          164 -LAVPKVYAW--EGNAVLMELIDAKELYR-VR-------V--ENPDEVLDMILEEVAKFYH---RGIVHGDLSQYNVLVS  227 (282)
T ss_dssp             -SSSCCEEEE--ETTEEEEECCCCEEGGG-CC-------C--SCHHHHHHHHHHHHHHHHH---TTEECSCCSTTSEEEE
T ss_pred             -CCcCeEEec--cceEEEEEecCCCcHHH-cc-------h--hhHHHHHHHHHHHHHHHHH---CCCEeCCCCHHHEEEE
Confidence             667775533  45699999999999988 41       1  2244799999999999998   9999999999999999


Q ss_pred             cCCCeeeeeeccceecCCCCcceeeeeeccccCCCccccc
Q 005257          503 KEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFS  542 (705)
Q Consensus       503 ~~~~~kL~DFGla~~~~~~~~~~~~~~~gt~~y~APE~~~  542 (705)
                       ++.+||+|||+|+.              +..++|||++.
T Consensus       228 -~~~vkl~DFG~a~~--------------~~~~~a~e~l~  252 (282)
T 1zar_A          228 -EEGIWIIDFPQSVE--------------VGEEGWREILE  252 (282)
T ss_dssp             -TTEEEECCCTTCEE--------------TTSTTHHHHHH
T ss_pred             -CCcEEEEECCCCeE--------------CCCCCHHHHHH
Confidence             99999999999963              34578999874

>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*

Probab=99.77  E-value=7.3e-19  Score=180.77  Aligned_cols=138  Identities=20%  Similarity=0.140  Sum_probs=107.7

Q ss_pred             CCcceEEeecCceEEEEEEEcCCCeE--EEEEEeccCCch------------------------hHHHHHHHHHHhccCC
Q 005257          366 FSEENVIGVGGNGKVYKGVLEGGGAE--IAVKRISHENDG------------------------GTRAFLAEISSLGRLK  419 (705)
Q Consensus       366 f~~~~~LG~G~fg~Vy~~~~~~~~~~--vavK~i~~~~~~------------------------~~~~~~~Ei~~l~~l~  419 (705)
                      |...+.||+|+||.||+|.+..+|+.  ||||+++.....                        ....+.+|+.+|.+++
T Consensus        49 ~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~  128 (258)
T 1zth_A           49 TAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERAK  128 (258)
T ss_dssp             EEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHHH
T ss_pred             hhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHHH
Confidence            56778999999999999999667888  999987543111                        1135789999999999


Q ss_pred             CCCcc--eeeeeeeeccCceEEEEeeCCC-C----ChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHh-cCCCCCeee
Q 005257          420 HKSLV--GLRGWCKREKGSLMLVYDYMEN-G----SLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLH-EGWEKKVLH  491 (705)
Q Consensus       420 Hpniv--~l~g~~~~~~~~~~lV~E~~~~-g----sL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH-~~~~~~iiH  491 (705)
                      |+++.  ..+.  .   ...+|||||+.+ |    +|.++...      .++.++..++.|++.||.||| +   .+|+|
T Consensus       129 ~~~i~~p~~~~--~---~~~~lVmE~~g~~g~~~~~L~~~~~~------~~~~~~~~i~~qi~~~l~~lH~~---~givH  194 (258)
T 1zth_A          129 EAGVSVPQPYT--Y---MKNVLLMEFIGEDELPAPTLVELGRE------LKELDVEGIFNDVVENVKRLYQE---AELVH  194 (258)
T ss_dssp             HTTCCCCCEEE--E---ETTEEEEECCEETTEECCBHHHHGGG------GGGSCHHHHHHHHHHHHHHHHHT---SCEEC
T ss_pred             hCCCCCCeEEE--c---CCCEEEEEecCCCCCccccHHHHhhc------cChHHHHHHHHHHHHHHHHHHHH---CCEEe
Confidence            88752  2332  1   246899999942 4    66665422      335577899999999999999 7   99999


Q ss_pred             cCCCCCCeEEccCCCeeeeeeccceecC
Q 005257          492 RDIKSSNVLLDKEMNGRLGDFGLARMHG  519 (705)
Q Consensus       492 rDLkp~NILld~~~~~kL~DFGla~~~~  519 (705)
                      |||||+|||++.  .++|+|||+|....
T Consensus       195 rDlkp~NILl~~--~~~liDFG~a~~~~  220 (258)
T 1zth_A          195 ADLSEYNIMYID--KVYFIDMGQAVTLR  220 (258)
T ss_dssp             SSCSTTSEEESS--SEEECCCTTCEETT
T ss_pred             CCCCHHHEEEcC--cEEEEECcccccCC
Confidence            999999999998  99999999997653

>2a6z_A EMP47P (FORM2); beta sandwich, carbohydrate binding protein, cargo receptor, structural genomics, NPPSFA; 1.00A {Saccharomyces cerevisiae} SCOP: b.29.1.13 PDB: 2a70_A 2a71_A

Probab=99.75  E-value=5.1e-18  Score=168.92  Aligned_cols=189  Identities=16%  Similarity=0.154  Sum_probs=129.1

Q ss_pred             CCeEEEcceEeecCcEEecCCCCCeEEEEEcCCCccccCCCCCcccceEEEEEEEEecCCCCCCCCceEEEEeeCCCCCC
Q 005257           36 SNLSLYGTATVESRILTLTNSTTFTIGRALYPSKIPTKRPNSSYVYPFSTSFIFAMAPYKGVLAGHGLVFLFVPFHGIKG  115 (705)
Q Consensus        36 ~~~~~~g~a~~~~~~l~lt~~~~~~~Gr~~y~~pv~l~~~~~~~~~sF~t~F~f~i~~~~~~~~g~G~aF~~~~~~~~~~  115 (705)
                      .+|.+.|+|.+.++.|+||++ .++.|.+|.+.|+++.+       +|+++|+|+|+.+. ..+||||||++++....  
T Consensus        24 ~~W~~~G~a~i~~~~IrLTp~-~~~~G~iWs~~p~~~~~-------~weie~~Fri~g~~-~~~gdGlA~W~t~~~~~--   92 (222)
T 2a6z_A           24 NNWQTGEQASLEEGRIVLTSN-QNSKGSLWLKQGFDLKD-------SFTMEWTFRSVGYS-GQTDGGISFWFVQDSNI--   92 (222)
T ss_dssp             TTEEEEETCEEETTEEESCCS-TTCEEEEEESSCEECCS-------CEEEEEEEEEESCC-SCCSCEEEEEEEECSSS--
T ss_pred             CCcEEcccEEEcCCEEEECCC-CCCeEEEEeCCCCCCCC-------CEEEEEEEEEeCCC-CCCCCEEEEEEECCCcc--
Confidence            689999999999999999999 57789999999998744       59999999998764 34799999999987431  


Q ss_pred             CCCCCcccccccCCCCCCCCcEEEEEeecccCCCCCCCCCCeeEEecCCCcccccccccccCCCCCCCCCCCCCCCCCCC
Q 005257          116 ATEAQHLGLFNRTNDGNSSNHVFGVEFDVFKNQEFNDIDENHVGIDVNSLTSVSAHAAGYWPDNQTDSSGSNSNSGTGDD  195 (705)
Q Consensus       116 ~~~g~~lGl~~~~~~~~~~~~~vaVEFDt~~n~~~~d~~~~Hvgidvns~~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~  195 (705)
                      ...|+.+|..       ....-+||+|||+.|.      .++|.+.+|.-. ..      |+....++...++|...++ 
T Consensus        93 ~~~g~~~G~~-------~~f~GL~I~~Dt~~n~------~p~i~~~~ndG~-~~------yd~~~~~~~~~~~C~~~~r-  151 (222)
T 2a6z_A           93 PRDKQLYNGP-------VNYDGLQLLVDNNGPL------GPTLRGQLNDGQ-KP------VDKTKIYDQSFASCLMGYQ-  151 (222)
T ss_dssp             CCCCTBTTBC-------TTCEEEEEEEESCSTT------SSEEEEEEEESS-SC------CCGGGHHHHCSEEEECCCT-
T ss_pred             cCCCcccCCC-------CCCCEEEEEEECCCCC------CceEEEEECCCC-ee------eccCCCccccccccceecc-
Confidence            1356666662       2345689999999873      356776665421 10      1000000011223332222 


Q ss_pred             ccccceeecCCCcceEEEEEec---CceEEEEEEEccCCCCCCCceeeeecCccccccc-eecccccccc---cccccce
Q 005257          196 EKSFKELKLNNGKNYQVWIDYA---DSFINITMVEAGMKRPKRPLLSVPLNLSGVLEDE-MYVGFTAATG---QLVESHK  268 (705)
Q Consensus       196 ~~~~~~~~l~~g~~~~~~I~Y~---~~~~~v~~~~~~~~~~~~~~ls~~vdl~~~l~~~-~~vGfsastg---~~~~~h~  268 (705)
                               +.+.+.+++|+|.   ...++|.+  .+    ...+-...|+    ||+. .|+||||+||   ...+.|.
T Consensus       152 ---------n~~~~~~~rI~Y~~~~~~~l~v~i--d~----~~C~~~~~v~----LP~~~~y~G~SA~TG~l~~~~d~hd  212 (222)
T 2a6z_A          152 ---------DSSVPSTIRVTYDLEDDNLLKVQV--DN----KVCFQTRKVR----FPSGSYRIGVTAQNGAVNNNAESFE  212 (222)
T ss_dssp             ---------TEEEEEEEEEEEEGGGTSEEEEEE--TT----EEEEEESCCC----CCSSEEEEEEEEECCSGGGCCCEEE
T ss_pred             ---------CCCCcEEEEEEEEcCCCcEEEEEE--cC----eEEEEeCCee----cCCCCcEEEEEEcCCCCCCCCccEE
Confidence                     3456889999995   45666655  33    1111222344    5555 4799999999   8889999


Q ss_pred             eeeeeec
Q 005257          269 ILAWSFS  275 (705)
Q Consensus       269 i~~wsf~  275 (705)
                      |++|++.
T Consensus       213 il~~~~~  219 (222)
T 2a6z_A          213 IFKMQFF  219 (222)
T ss_dssp             EEEEEEE
T ss_pred             EEEEEEE
Confidence            9999875

>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A

Probab=99.59  E-value=8.5e-16  Score=165.15  Aligned_cols=141  Identities=16%  Similarity=0.174  Sum_probs=99.6

Q ss_pred             CCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCCc--------------hhHHHH--------HHHHHHhccCCCCC
Q 005257          365 GFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHEND--------------GGTRAF--------LAEISSLGRLKHKS  422 (705)
Q Consensus       365 ~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~--------------~~~~~~--------~~Ei~~l~~l~Hpn  422 (705)
                      -|++.++||+|++|.||+|... +|+.||||+++....              ......        .+|...|.++.+.+
T Consensus        96 iY~I~~~IG~Gk~a~VY~a~d~-~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~~g  174 (397)
T 4gyi_A           96 VYSVGSRIGVGKESDIMIVADE-KGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYEEG  174 (397)
T ss_dssp             CSEEEEEEEECSSEEEEEEECT-TCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEEecCEeeeCCceEEEEEECC-CCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHhcC
Confidence            3888999999999999999986 588999998753210              011112        23555555554443


Q ss_pred             cceeeeeeeeccCceEEEEeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEc
Q 005257          423 LVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLD  502 (705)
Q Consensus       423 iv~l~g~~~~~~~~~~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld  502 (705)
                      +....-+..   ...+|||||+++++|..+..         ..+...++.|++.+|.|||+   .+||||||||.|||++
T Consensus       175 v~vp~p~~~---~~~~LVME~i~G~~L~~l~~---------~~~~~~l~~qll~~l~~lH~---~gIVHrDLKp~NILl~  239 (397)
T 4gyi_A          175 FPVPEPIAQ---SRHTIVMSLVDALPMRQVSS---------VPDPASLYADLIALILRLAK---HGLIHGDFNEFNILIR  239 (397)
T ss_dssp             CSCCCEEEE---ETTEEEEECCSCEEGGGCCC---------CSCHHHHHHHHHHHHHHHHH---TTEECSCCSTTSEEEE
T ss_pred             CCCCeeeec---cCceEEEEecCCccHhhhcc---------cHHHHHHHHHHHHHHHHHHH---CCCcCCCCCHHHEEEe
Confidence            321111111   12379999999988866531         12345688999999999998   8999999999999998


Q ss_pred             cCCC----------eeeeeeccceecCCC
Q 005257          503 KEMN----------GRLGDFGLARMHGHG  521 (705)
Q Consensus       503 ~~~~----------~kL~DFGla~~~~~~  521 (705)
                      +++.          +.|+||+-+....+.
T Consensus       240 ~dgd~~d~~~~~~~~~iID~~Q~V~~~hp  268 (397)
T 4gyi_A          240 EEKDAEDPSSITLTPIIIXFPQMVSMDHP  268 (397)
T ss_dssp             EEECSSCTTSEEEEEEECCCTTCEETTST
T ss_pred             CCCCcccccccccceEEEEeCCcccCCCC
Confidence            8763          889999988765443

>2a6v_A EMP46P; beta sandwich, carbohydrate binding protein, cargo receptor, structural genomics, NPPSFA; 1.52A {Saccharomyces cerevisiae} SCOP: b.29.1.13 PDB: 2a6w_A 2a6x_A

Probab=99.48  E-value=6.7e-13  Score=131.46  Aligned_cols=186  Identities=15%  Similarity=0.111  Sum_probs=123.3

Q ss_pred             CCeEEEcceEeecCcEEecCCCCCeEEEEEcCCCccccCCCCCcccceEEEEEEEEecCCCCCCCCceEEEEeeCCCCCC
Q 005257           36 SNLSLYGTATVESRILTLTNSTTFTIGRALYPSKIPTKRPNSSYVYPFSTSFIFAMAPYKGVLAGHGLVFLFVPFHGIKG  115 (705)
Q Consensus        36 ~~~~~~g~a~~~~~~l~lt~~~~~~~Gr~~y~~pv~l~~~~~~~~~sF~t~F~f~i~~~~~~~~g~G~aF~~~~~~~~~~  115 (705)
                      .+|.+.|+|.+.++.|+||++ +++.|.+|-+.|+.+-       .+|+.+|+|+|+..... +||||||+++.....  
T Consensus        27 ~~W~~~G~t~v~~~~IrLTp~-~s~~G~lWs~~p~~~~-------~~weiev~Fri~G~~~~-~gdGlA~Wyt~~~~~--   95 (226)
T 2a6v_A           27 SQWTLGDKVKLEEGRFVLTPG-KNTKGSLWLKPEYSIK-------DAMTIEWTFRSFGFRGS-TKGGLAFWLKQGNEG--   95 (226)
T ss_dssp             TTEEEEETCEEETTEEESCCS-TTCEEEEEESSCBCCS-------SCEEEEEEEEEESCCSC-CSCEEEEEEECSCCC--
T ss_pred             CCcEEcCCeEEeCCEEEECCC-CCceEEEeeCCCCCCC-------CCeEEEEEEEEecCCCC-CCCEEEEEEECCCCC--
Confidence            589999999999899999999 9999999999999862       25999999999887433 799999999975321  


Q ss_pred             CCCCCcccccccCCCCCCCCcEEEEEeecccCCCCCCCCCCeeEEecCCCcccccccccccCCCCCCCCCCCCCCCCCCC
Q 005257          116 ATEAQHLGLFNRTNDGNSSNHVFGVEFDVFKNQEFNDIDENHVGIDVNSLTSVSAHAAGYWPDNQTDSSGSNSNSGTGDD  195 (705)
Q Consensus       116 ~~~g~~lGl~~~~~~~~~~~~~vaVEFDt~~n~~~~d~~~~Hvgidvns~~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~  195 (705)
                       ..|..+|-.      .....-+||.|||+.|.      ...|-+-+|.-    +..   |+...  +...++|...|+ 
T Consensus        96 -~~g~vfGg~------~d~f~GlgI~~Dt~~n~------~p~i~~~~NDG----t~~---yd~~~--~~~~g~C~~~~r-  152 (226)
T 2a6v_A           96 -DSTELFGGS------SKKFNGLMILLRLDDKL------GESVTAYLNDG----TKD---LDIES--SPYFASCLFQYQ-  152 (226)
T ss_dssp             -CCCTBTTTB------CSSCEEEEEEEEEETTT------EEEEEEEEEES----SSC---CCTTT--SCCSEEEECCCS-
T ss_pred             -CCccccccc------CCCccEEEEEEECCCCC------CceEEEEECCC----Ccc---cCCCC--CcccceEeEecc-
Confidence             234333310      11345689999999762      12233322211    100   11000  223344443333 


Q ss_pred             ccccceeecCCCcceEEEEEec---CceEEEEEEEccCCCCCCCcee-eeecCccccccce--eccccccccccccccee
Q 005257          196 EKSFKELKLNNGKNYQVWIDYA---DSFINITMVEAGMKRPKRPLLS-VPLNLSGVLEDEM--YVGFTAATGQLVESHKI  269 (705)
Q Consensus       196 ~~~~~~~~l~~g~~~~~~I~Y~---~~~~~v~~~~~~~~~~~~~~ls-~~vdl~~~l~~~~--~vGfsastg~~~~~h~i  269 (705)
                               +.+.+.++.|.|.   ...+.|.+.  +     +.-+. ..|+    ||..-  |+||||+||...+.|.|
T Consensus       153 ---------n~~~~t~~ri~Y~~~~~~~l~v~id--~-----~~Cf~~~~v~----LP~g~~~yfGiSAaTg~~~D~hdi  212 (226)
T 2a6v_A          153 ---------DSMVPSTLRLTYNPLDNHLLKLQMD--N-----RVCFQTRKVK----FMGSSPFRIGTSAINDASKESFEI  212 (226)
T ss_dssp             ---------SCSSCEEEEEEEEGGGTSEEEEEET--T-----EEEEEESCCC----GGGTSCBEEEEEEECCTTCCEEEE
T ss_pred             ---------CCCCCEEEEEEEEccCCCEEEEEEc--C-----CeeEEECCee----cCCCCccEEEEEEcCCCCcccEEE
Confidence                     2456789999994   667777773  2     11121 1233    55554  99999999999999999


Q ss_pred             eeeeec
Q 005257          270 LAWSFS  275 (705)
Q Consensus       270 ~~wsf~  275 (705)
                      ++..+.
T Consensus       213 ls~~~~  218 (226)
T 2a6v_A          213 LKMKLY  218 (226)
T ss_dssp             EEEEEE
T ss_pred             EEEEEE
Confidence            997654

>2ltn_B PEA lectin, beta chain; 1.70A {Pisum sativum} SCOP: b.29.1.1 PDB: 1hkd_B 1rin_B* 1ofs_B* 1bqp_B* 1loe_B 1loa_B* 1loc_B* 1lod_B* 1lob_B 1lof_B* 1log_B* 1lof_D* 1les_B* 2b7y_B* 1lgc_B* 1lgb_B* 1len_B 1lem_B 2lal_B

Probab=99.40  E-value=3.1e-14  Score=106.06  Aligned_cols=44  Identities=32%  Similarity=0.541  Sum_probs=41.3

Q ss_pred             CCceeeeecCccccccceecccccccccccccceeeeeeecccc
Q 005257          235 RPLLSVPLNLSGVLEDEMYVGFTAATGQLVESHKILAWSFSNTK  278 (705)
Q Consensus       235 ~~~ls~~vdl~~~l~~~~~vGfsastg~~~~~h~i~~wsf~~~~  278 (705)
                      +|+|+..|||+++|||+||||||||||...+.|+|++|+|++..
T Consensus         3 ~p~ls~~vdLs~~l~e~v~VGFSAsTG~~~~~h~IlsWsF~s~~   46 (52)
T 2ltn_B            3 SYTLSDVVSLKDVVPEWVRIGFSATTGAEYAAHEVLSWSFHSEL   46 (52)
T ss_dssp             EEEEEEECCHHHHSCSEEEEEEEEECCSSCCEEEEEEEEEEEEE
T ss_pred             eeeEEEEEcHHHhcCceEEEEEEeccCCcceeEEEEEeEEEeec
Confidence            47899999999999999999999999999999999999998764

>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*

Probab=99.15  E-value=8.3e-11  Score=120.27  Aligned_cols=145  Identities=15%  Similarity=0.077  Sum_probs=110.6

Q ss_pred             HHhCCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCCchhHHHHHHHHHHhccCC-CCCcceeeeeeeeccCceEE
Q 005257          361 AATKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLK-HKSLVGLRGWCKREKGSLML  439 (705)
Q Consensus       361 ~at~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~~~~~~~~~Ei~~l~~l~-Hpniv~l~g~~~~~~~~~~l  439 (705)
                      ..-.+|.....++.|+.+.||++...  +..+++|+...........+.+|+.+++.+. +.++.++++++.. .+..++
T Consensus        11 ~~l~~~~~~~~~~g~s~~~v~~~~~~--~~~~vlK~~~~~~~~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~-~~~~~l   87 (263)
T 3tm0_A           11 KLIEKYRCVKDTEGMSPAKVYKLVGE--NENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERH-DGWSNL   87 (263)
T ss_dssp             HHHTTSEEEECCSCCSSSEEEEEECS--SCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEE-TTEEEE
T ss_pred             HHhccceeEeeccCCCCCeEEEEECC--CCcEEEEeCCcccCCCHHHHHHHHHHHHHHhcCCCCCeEEEEEec-CCceEE
Confidence            34456777778888889999999754  5789999986532222345888999999884 6677788888765 678899


Q ss_pred             EEeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcC-----------------------------------
Q 005257          440 VYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEG-----------------------------------  484 (705)
Q Consensus       440 V~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~-----------------------------------  484 (705)
                      ||||++|.+|.+.+.        +..+...++.+++++|..||+.                                   
T Consensus        88 v~e~i~G~~l~~~~~--------~~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (263)
T 3tm0_A           88 LMSEADGVLCSEEYE--------DEQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWE  159 (263)
T ss_dssp             EEECCSSEEHHHHCC--------TTTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSGGGGS
T ss_pred             EEEecCCeehhhccC--------CcccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhcccccccccccc
Confidence            999999999987531        1123357889999999999971                                   


Q ss_pred             ---------------------CCCCeeecCCCCCCeEEccCCCeeeeeeccce
Q 005257          485 ---------------------WEKKVLHRDIKSSNVLLDKEMNGRLGDFGLAR  516 (705)
Q Consensus       485 ---------------------~~~~iiHrDLkp~NILld~~~~~kL~DFGla~  516 (705)
                                           ....++|+|++|.|||++++..+.|.||+.+.
T Consensus       160 ~~~~~~~~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a~  212 (263)
T 3tm0_A          160 EDTPFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSG  212 (263)
T ss_dssp             TTCSSSSHHHHHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTCE
T ss_pred             ccccCCCHHHHHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhcc
Confidence                                 01559999999999999876556799999875

>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6

Probab=98.92  E-value=1.4e-09  Score=110.40  Aligned_cols=136  Identities=15%  Similarity=0.105  Sum_probs=96.0

Q ss_pred             CCCcceEEe-ecCceEEEEEEEcCCCeEEEEEEeccCCchhHHHHHHHHHHhccCCCCCc--ceeeeeeeeccCceEEEE
Q 005257          365 GFSEENVIG-VGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSL--VGLRGWCKREKGSLMLVY  441 (705)
Q Consensus       365 ~f~~~~~LG-~G~fg~Vy~~~~~~~~~~vavK~i~~~~~~~~~~~~~Ei~~l~~l~Hpni--v~l~g~~~~~~~~~~lV~  441 (705)
                      ++.. ..++ .|..+.||++... +|..+++|.....   ....+.+|+.+++.+++.++  .+++++... .+..++||
T Consensus        21 ~~~~-~~~~~gg~~~~v~~~~~~-~g~~~vlK~~~~~---~~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~-~~~~~~v~   94 (264)
T 1nd4_A           21 GYDW-AQQTIGCSDAAVFRLSAQ-GRPVLFVKTDLSG---ALNELQDEAARLSWLATTGVPCAAVLDVVTE-AGRDWLLL   94 (264)
T ss_dssp             TCEE-EECSCTTSSCEEEEEECT-TSCCEEEEEECSC---TTSCHHHHHHHHHHHHTTTCCBCCEEEEEEC-SSCEEEEE
T ss_pred             CCce-EecccCCCCceEEEEecC-CCCeEEEEeCCcc---cchhhhHHHHHHHHHHhCCCCCCeEEEeccC-CCCCEEEE
Confidence            3443 3444 4556999999754 4677999987543   23457789999999865554  447776654 56789999


Q ss_pred             eeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCC------------------------------------
Q 005257          442 DYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGW------------------------------------  485 (705)
Q Consensus       442 E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~------------------------------------  485 (705)
                      ||++|.+|.  ..      ...   ...++.+++..|..||+..                                    
T Consensus        95 e~i~G~~l~--~~------~~~---~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  163 (264)
T 1nd4_A           95 GEVPGQDLL--SS------HLA---PAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQ  163 (264)
T ss_dssp             ECCSSEETT--TS------CCC---HHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGT
T ss_pred             EecCCcccC--cC------cCC---HhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhhhhcc
Confidence            999998884  21      111   2356778888888888621                                    


Q ss_pred             -------------------CCCeeecCCCCCCeEEccCCCeeeeeecccee
Q 005257          486 -------------------EKKVLHRDIKSSNVLLDKEMNGRLGDFGLARM  517 (705)
Q Consensus       486 -------------------~~~iiHrDLkp~NILld~~~~~kL~DFGla~~  517 (705)
                                         ...++|+|++|.|||++++..+.|.||+.+..
T Consensus       164 ~~~~~~~~~~l~~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~~  214 (264)
T 1nd4_A          164 GLAPAELFARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLGV  214 (264)
T ss_dssp             TCCHHHHHHHHHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCEE
T ss_pred             CccHHHHHHHHHHhcCCCCCeEEECCCCCCCcEEEECCcEEEEEcchhccc
Confidence                               12399999999999998776667999998753

>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}

Probab=98.84  E-value=7.5e-09  Score=110.92  Aligned_cols=143  Identities=14%  Similarity=0.189  Sum_probs=105.6

Q ss_pred             cceEEeecCceEEEEEEEcCCCeEEEEEEec--cCC-chhHHHHHHHHHHhccCC--CCCcceeeeeeeecc--CceEEE
Q 005257          368 EENVIGVGGNGKVYKGVLEGGGAEIAVKRIS--HEN-DGGTRAFLAEISSLGRLK--HKSLVGLRGWCKREK--GSLMLV  440 (705)
Q Consensus       368 ~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~--~~~-~~~~~~~~~Ei~~l~~l~--Hpniv~l~g~~~~~~--~~~~lV  440 (705)
                      ..+.|+.|.++.||+....  +..+++|+..  ... ......+.+|..+++.|+  +..+.+++.++....  +..++|
T Consensus        42 ~~~~l~~G~sn~~y~v~~~--~~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~~v  119 (359)
T 3dxp_A           42 SVEQFKGGQSNPTFKLVTP--GQTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAFYI  119 (359)
T ss_dssp             EEEECCC-CCSCEEEEECS--SCEEEEECCCC----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCEEE
T ss_pred             eEEEcCCcccceEEEEEEC--CceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeEEE
Confidence            4567899999999998875  3578888775  221 122356788999999987  455778888776521  357899


Q ss_pred             EeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCC-----------------------------------
Q 005257          441 YDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGW-----------------------------------  485 (705)
Q Consensus       441 ~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~-----------------------------------  485 (705)
                      |||++|..+.+..     ...++..++..++.+++..|..||...                                   
T Consensus       120 me~v~G~~l~~~~-----~~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  194 (359)
T 3dxp_A          120 MEFVSGRVLWDQS-----LPGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSETESI  194 (359)
T ss_dssp             EECCCCBCCCCTT-----CTTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCCSCC
T ss_pred             EEecCCeecCCCc-----cccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCCcCC
Confidence            9999998875421     114678889999999999999999720                                   


Q ss_pred             --------------------CCCeeecCCCCCCeEEccCCC--eeeeeecccee
Q 005257          486 --------------------EKKVLHRDIKSSNVLLDKEMN--GRLGDFGLARM  517 (705)
Q Consensus       486 --------------------~~~iiHrDLkp~NILld~~~~--~kL~DFGla~~  517 (705)
                                          ...++|+|+++.|||++.++.  +.|.||+.+..
T Consensus       195 ~~~~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~  248 (359)
T 3dxp_A          195 PAMDSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTL  248 (359)
T ss_dssp             HHHHHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEE
T ss_pred             hHHHHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECcccccc
Confidence                                257999999999999997753  58999999875

>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A

Probab=98.70  E-value=3.3e-09  Score=111.07  Aligned_cols=184  Identities=17%  Similarity=0.168  Sum_probs=121.1

Q ss_pred             ceEEeecCceEEEEEEEcCCCeEEEEEEeccCCchhHHHHHHHHHHhccCC-CCCc--ceeeeeeeecc--CceEEEEee
Q 005257          369 ENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLK-HKSL--VGLRGWCKREK--GSLMLVYDY  443 (705)
Q Consensus       369 ~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~~~~~~~~~Ei~~l~~l~-Hpni--v~l~g~~~~~~--~~~~lV~E~  443 (705)
                      .+.++.|....||+..     ..+++|+...  ......+.+|..+|+.+. +..+  .+++..+....  ...++|||+
T Consensus        25 i~~~~~G~~n~v~~v~-----~~~vlR~~~~--~~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~vm~~   97 (304)
T 3sg8_A           25 IEISGEGNDCIAYEIN-----RDFIFKFPKH--SRGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAGFTK   97 (304)
T ss_dssp             CCEEEECSSEEEEEST-----TSEEEEEESS--HHHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEEEEC
T ss_pred             eEecCCCCcceEEEEC-----CEEEEEecCC--cchHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEEEcc
Confidence            4569999999999863     3488897542  234567889999998884 3332  33444332211  134789999


Q ss_pred             CCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcC---------------------------------------
Q 005257          444 MENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEG---------------------------------------  484 (705)
Q Consensus       444 ~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~---------------------------------------  484 (705)
                      ++|.+|......     .++..++..++.+++..|..||+.                                       
T Consensus        98 i~G~~l~~~~~~-----~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  172 (304)
T 3sg8_A           98 IKGVPLTPLLLN-----NLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQMKK  172 (304)
T ss_dssp             CCCEECCHHHHH-----TSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHHHHH
T ss_pred             cCCeECCccccc-----cCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCcccHHH
Confidence            999888754331     467788888899999999888851                                       


Q ss_pred             ----------------CCCCeeecCCCCCCeEEcc--CCCeeeeeeccceecCCCCcceeeeeeccccC---CCcccccc
Q 005257          485 ----------------WEKKVLHRDIKSSNVLLDK--EMNGRLGDFGLARMHGHGQVASTTRVVGTVGY---LAPEVFSS  543 (705)
Q Consensus       485 ----------------~~~~iiHrDLkp~NILld~--~~~~kL~DFGla~~~~~~~~~~~~~~~gt~~y---~APE~~~~  543 (705)
                                      ....++|+|++|.||++++  +..+.|.||+.+..........     ....+   ..|+....
T Consensus       173 l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~~~~~Dl~-----~~~~~~~~~~~~~~~~  247 (304)
T 3sg8_A          173 VDDFYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAISDPDNDFI-----SLMEDDEEYGMEFVSK  247 (304)
T ss_dssp             HHHHHHHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEEECTTHHHH-----TTCCTTTSCCHHHHHH
T ss_pred             HHHHHHHHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCccCChHHHHH-----HHHhhccccCHHHHHH
Confidence                            1246899999999999998  4567899999987543211100     00011   12221110


Q ss_pred             -----CC---------CCccccEEEEehhHHHHhhCCCCC
Q 005257          544 -----GR---------ASTQTDVFGFGILILEVLSGRRPI  569 (705)
Q Consensus       544 -----~~---------~s~ksDVwS~Gvvl~ElltG~~Pf  569 (705)
                           +.         .....+.|+++.++|++.+|..+|
T Consensus       248 ~l~~Y~~~~~~~~~~r~~~~~~~~~l~~~~~~~~~g~~~~  287 (304)
T 3sg8_A          248 ILNHYKHKDIPTVLEKYRMKEKYWSFEKIIYGKEYGYMDW  287 (304)
T ss_dssp             HHHHHTCSCHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred             HHHHcCCCCcHHHHHHHHHHHHHHHHHHHHHHHHcCCHHH
Confidence                 01         112257899999999999997765

>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*

Probab=98.30  E-value=3.9e-06  Score=87.69  Aligned_cols=137  Identities=17%  Similarity=0.146  Sum_probs=95.3

Q ss_pred             ceEEeecCceEEEEEEEcCCCeEEEEEEeccCCchhHHHHHHHHHHhccCCCC---CcceeeeeeeeccCceEEEEeeCC
Q 005257          369 ENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHK---SLVGLRGWCKREKGSLMLVYDYME  445 (705)
Q Consensus       369 ~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~~~~~~~~~Ei~~l~~l~Hp---niv~l~g~~~~~~~~~~lV~E~~~  445 (705)
                      .+.++.|....||+.     +..+++|+-.  .......+.+|..+|..|++.   .+.+.+.++....+..++||||++
T Consensus        24 v~~l~~G~~n~v~~v-----g~~~VlR~~~--~~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~~~v~e~i~   96 (306)
T 3tdw_A           24 VESLGEGFRNYAILV-----NGDWVFRFPK--SQQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVGYRKVQ   96 (306)
T ss_dssp             EEEEEECSSEEEEEE-----TTTEEEEEES--SHHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCEEEEEECCC
T ss_pred             eeecCCCcceeEEEE-----CCEEEEEecC--CchHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCceEEEEeccC
Confidence            467888999999988     3558888742  223456788999999999753   244556655433556789999999


Q ss_pred             CCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcC-----------------------------------------
Q 005257          446 NGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEG-----------------------------------------  484 (705)
Q Consensus       446 ~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~-----------------------------------------  484 (705)
                      |..|......     .++..++..++.+++..|..||+.                                         
T Consensus        97 G~~l~~~~~~-----~l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l~~~~~~~  171 (306)
T 3tdw_A           97 GQILGEDGMA-----VLPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPLLDESLRDY  171 (306)
T ss_dssp             SEECHHHHHT-----TSCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHTGGGSCHHHHHH
T ss_pred             CeECchhhhh-----hCCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhcccccchhhHHH
Confidence            9888763221     244555555666666666555531                                         


Q ss_pred             ----------------CCCCeeecCCCCCCeEEcc---CCCe-eeeeecccee
Q 005257          485 ----------------WEKKVLHRDIKSSNVLLDK---EMNG-RLGDFGLARM  517 (705)
Q Consensus       485 ----------------~~~~iiHrDLkp~NILld~---~~~~-kL~DFGla~~  517 (705)
                                      ....++|+|++|.||+++.   ++.+ .|.||+.+..
T Consensus       172 l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~  224 (306)
T 3tdw_A          172 LTLRFQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAI  224 (306)
T ss_dssp             HHHHHHHHHHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCEE
T ss_pred             HHHHHHHHHhCcccccCCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcCC
Confidence                            1245799999999999987   4554 7999998764

>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*

Probab=98.26  E-value=4.8e-06  Score=84.94  Aligned_cols=137  Identities=15%  Similarity=0.130  Sum_probs=96.9

Q ss_pred             eEEeecCce-EEEEEEEcCCCeEEEEEEeccCCchhHHHHHHHHHHhccCC-CCCcceeeeeeeeccCceEEEEeeCCCC
Q 005257          370 NVIGVGGNG-KVYKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLK-HKSLVGLRGWCKREKGSLMLVYDYMENG  447 (705)
Q Consensus       370 ~~LG~G~fg-~Vy~~~~~~~~~~vavK~i~~~~~~~~~~~~~Ei~~l~~l~-Hpniv~l~g~~~~~~~~~~lV~E~~~~g  447 (705)
                      +.+..|..| .||+.....++..+++|+-..   ....++.+|...|+.|. +-.+.++++++.. .+..++|||++++.
T Consensus        30 ~~~~~G~S~~~v~rl~~~~~~~~~~lk~~~~---~~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~-~~~~~lvme~l~G~  105 (272)
T 4gkh_A           30 ARDNVGQSGATIYRLYGKPNAPELFLKHGKG---SVANDVTDEMVRLNWLTAFMPLPTIKHFIRT-PDDAWLLTTAIPGK  105 (272)
T ss_dssp             EEEECSSSSCEEEEEECCTTCCCEEEEEEET---HHHHHHHHHHHHHHHHTTTSCCCCEEEEEEE-TTEEEEEEECCCSE
T ss_pred             EEccCCCcCCeEEEEEecCCCeEEEEEECCC---CCHhHHHHHHHHHHHhccCCCcCeEEEEEEE-CCeEEEEEEeeCCc
Confidence            345556665 699988777777899997642   33456788999988884 3335667777765 56789999999998


Q ss_pred             ChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcC-------------------------------------------
Q 005257          448 SLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEG-------------------------------------------  484 (705)
Q Consensus       448 sL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~-------------------------------------------  484 (705)
                      ++.+....       .......+..+++..|.-||..                                           
T Consensus       106 ~~~~~~~~-------~~~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  178 (272)
T 4gkh_A          106 TAFQVLEE-------YPDSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERNGWPVEQ  178 (272)
T ss_dssp             EHHHHHHH-------CGGGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGTTCCHHH
T ss_pred             cccccccC-------CHHHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhccccccchHHHH
Confidence            88776532       1223345566666666666621                                           


Q ss_pred             ------------CCCCeeecCCCCCCeEEccCCCeeeeeecccee
Q 005257          485 ------------WEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARM  517 (705)
Q Consensus       485 ------------~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~  517 (705)
                                  ....++|+|+.+.|||++.++.+-|.||+.+..
T Consensus       179 ~~~~l~~~~~~~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a~~  223 (272)
T 4gkh_A          179 VWKEMHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVGI  223 (272)
T ss_dssp             HHHHHHTTCCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCEE
T ss_pred             HHHHHHhcccccCCcEEEcCCCCCCeEEEECCeEEEEEECccccc
Confidence                        012489999999999999876677999998753

>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*

Probab=97.84  E-value=2.7e-05  Score=82.82  Aligned_cols=83  Identities=10%  Similarity=0.029  Sum_probs=54.3

Q ss_pred             ceEE-eecCceEEEEEEEc---C---CCeEEEEEEeccCC---chhHHHHHHHHHHhccCC-C--CCcceeeeeeeecc-
Q 005257          369 ENVI-GVGGNGKVYKGVLE---G---GGAEIAVKRISHEN---DGGTRAFLAEISSLGRLK-H--KSLVGLRGWCKREK-  434 (705)
Q Consensus       369 ~~~L-G~G~fg~Vy~~~~~---~---~~~~vavK~i~~~~---~~~~~~~~~Ei~~l~~l~-H--pniv~l~g~~~~~~-  434 (705)
                      .+.| +.|....+|+....   +   ++..+++|+.....   ......+.+|..+++.|. +  -.+.+++.++.... 
T Consensus        25 ~~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~~  104 (357)
T 3ats_A           25 ESGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGDV  104 (357)
T ss_dssp             EEEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSSTT
T ss_pred             EEECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCCc
Confidence            4567 78888999988764   1   15678888754322   001245678888888884 3  24566777665421 


Q ss_pred             -CceEEEEeeCCCCChhH
Q 005257          435 -GSLMLVYDYMENGSLDK  451 (705)
Q Consensus       435 -~~~~lV~E~~~~gsL~~  451 (705)
                       +..++||||++|..+.+
T Consensus       105 ~g~~~~v~e~l~G~~l~~  122 (357)
T 3ats_A          105 LGTPFFLMDYVEGVVPPD  122 (357)
T ss_dssp             TSSCEEEEECCCCBCCCB
T ss_pred             cCCceEEEEecCCCChhh
Confidence             35689999999876643

>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*

Probab=97.80  E-value=8e-05  Score=80.51  Aligned_cols=76  Identities=16%  Similarity=0.006  Sum_probs=48.8

Q ss_pred             ceEEeecCceEEEEEEEcCCCeEEEEEEeccCCc-------hhHHHHHHHHHHhccCCC--CCcc-eeeeeeeeccCceE
Q 005257          369 ENVIGVGGNGKVYKGVLEGGGAEIAVKRISHEND-------GGTRAFLAEISSLGRLKH--KSLV-GLRGWCKREKGSLM  438 (705)
Q Consensus       369 ~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~-------~~~~~~~~Ei~~l~~l~H--pniv-~l~g~~~~~~~~~~  438 (705)
                      .+.||.|..+.||++....+++.++||.......       .....+..|.+++..+..  |..+ +++.+ .  ....+
T Consensus        35 ~~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~-d--~~~~~  111 (397)
T 2olc_A           35 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS-D--TEMAV  111 (397)
T ss_dssp             EEECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE-E--TTTTE
T ss_pred             EEECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEE-c--CCccE
Confidence            5679999999999998765567899997643211       123456778888887742  4444 44443 2  33458


Q ss_pred             EEEeeCCCC
Q 005257          439 LVYDYMENG  447 (705)
Q Consensus       439 lV~E~~~~g  447 (705)
                      +|||++++.
T Consensus       112 lvmE~l~g~  120 (397)
T 2olc_A          112 TVMEDLSHL  120 (397)
T ss_dssp             EEECCCTTS
T ss_pred             EEEEeCCCc
Confidence            999999764

>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}

Probab=97.68  E-value=0.00018  Score=75.64  Aligned_cols=143  Identities=17%  Similarity=0.168  Sum_probs=80.3

Q ss_pred             ceEEeecCceEEEEEEEcCCCeEEEEEEeccCCchhHHHHHHHHHHhccCC-----CCCcceee-e-eeeeccCceEEEE
Q 005257          369 ENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLK-----HKSLVGLR-G-WCKREKGSLMLVY  441 (705)
Q Consensus       369 ~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~~~~~~~~~Ei~~l~~l~-----Hpniv~l~-g-~~~~~~~~~~lV~  441 (705)
                      .+.|+.|..+.||+....  +..+++|+....    ...+..|..++..|.     .|.++... | .+....+..+++|
T Consensus        37 ~~~l~gG~~n~~~~v~~~--~~~~vlk~~~~~----~~~~~~e~~~l~~L~~~g~~vp~~~~~~~g~~~~~~~~~~~~l~  110 (346)
T 2q83_A           37 IDVIQGNQMALVWKVHTD--SGAVCLKRIHRP----EKKALFSIFAQDYLAKKGMNVPGILPNKKGSLYSKHGSFLFVVY  110 (346)
T ss_dssp             EEECC----CEEEEEEET--TEEEEEEEECSC----HHHHHHHHHHHHHHHHHTCSSCCBCCCTTSCSCEEETTEEEEEE
T ss_pred             eeeccccccCcEEEEEeC--CCCEEEEecCCC----HHHHHHHHHHHHHHHHcCCCCCceeecCCCCEEEEECCEEEEEE
Confidence            345666778999999874  345899988642    233444555555553     24333311 1 1112255678999


Q ss_pred             eeCCCCChh--------------HHHHhcCC----C-------CcccHHHH-----------------------------
Q 005257          442 DYMENGSLD--------------KWIFQCDG----S-------MMLSCEER-----------------------------  467 (705)
Q Consensus       442 E~~~~gsL~--------------~~L~~~~~----~-------~~l~~~~~-----------------------------  467 (705)
                      ||++|..+.              ..++....    .       ..-.|...                             
T Consensus       111 ~~i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~  190 (346)
T 2q83_A          111 DWIEGRPFELTVKQDLEFIMKGLADFHTASVGYQPPNGVPIFTKLGRWPNHYTKRCKQMETWKLMAEAEKEDPFSQLYLQ  190 (346)
T ss_dssp             ECCCCBCCCTTSHHHHHHHHHHHHHHHHHHTTCCCCTTCCCCBCTTCHHHHHHHHHHHHHHHHHHHHHCSSCHHHHHHHH
T ss_pred             EeecCccCCCCCHHHHHHHHHHHHHHHHhCCCCCCCccchhcccccchHHHHHHHHHHHHHHHHHHHhccCCcHHHHHHH
Confidence            999986542              11221100    0       00122211                             


Q ss_pred             --HHHHHHHHHHHHHHhc----------CCCCCeeecCCCCCCeEEccCCCeeeeeecccee
Q 005257          468 --IRVLKDVAAGVLYLHE----------GWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARM  517 (705)
Q Consensus       468 --~~i~~qia~gL~yLH~----------~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~  517 (705)
                        ..+..++..++.+|++          .....++|+|+++.|||++.++.+.|.||+.+..
T Consensus       191 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~~  252 (346)
T 2q83_A          191 EIDGFIEDGLRIKDRLLQSTYVPWTEQLKKSPNLCHQDYGTGNTLLGENEQIWVIDLDTVSF  252 (346)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTHHHHHHHHHHSCCEECSSCSTTSEEECGGGCEEECCCTTCEE
T ss_pred             HHHHHHHHHHHHHHHHHhchHHHHHHhccccCceecCCCCcccEEEeCCCcEEEEehhhccc
Confidence              1111223445666653          1247899999999999998888899999998753

>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}

Probab=97.24  E-value=0.0016  Score=66.84  Aligned_cols=79  Identities=18%  Similarity=0.260  Sum_probs=55.2

Q ss_pred             CCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCCchhHHHHHHHHHHhccCCCC---CcceeeeeeeeccCceEEEE
Q 005257          365 GFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHK---SLVGLRGWCKREKGSLMLVY  441 (705)
Q Consensus       365 ~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~~~~~~~~~Ei~~l~~l~Hp---niv~l~g~~~~~~~~~~lV~  441 (705)
                      .....+.+|.|..+.||+.... +|+.+++|+-..........|.+|...|+.|.-.   .+.+++++.     .-++||
T Consensus        16 ~v~~v~~~g~G~~~~vyrv~l~-DG~~~~vK~~~~~~~~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~~-----~~~lv~   89 (288)
T 3f7w_A           16 EVAAVAERGHSHRWHLYRVELA-DGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGWD-----DRTLAM   89 (288)
T ss_dssp             CEEEEEEEEEETTEEEEEEEET-TSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE-----TTEEEE
T ss_pred             CeEEEEecCCCCCeEEEEEEEC-CCCEEEEEEeCCCCcchhhHHHHHHHHHHHHHhhCCCCcceEEecc-----CceEEE
Confidence            3445678999999999999986 4788999986554444445678899988888422   233444431     237899


Q ss_pred             eeCCCCCh
Q 005257          442 DYMENGSL  449 (705)
Q Consensus       442 E~~~~gsL  449 (705)
                      ||++++..
T Consensus        90 e~l~~~~~   97 (288)
T 3f7w_A           90 EWVDERPP   97 (288)
T ss_dssp             ECCCCCCC
T ss_pred             EeecccCC
Confidence            99987654

>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}

Probab=97.14  E-value=0.002  Score=67.14  Aligned_cols=140  Identities=14%  Similarity=0.079  Sum_probs=90.6

Q ss_pred             CcceEEeecCceEEEEEEEcCCCeEEEEEEeccCCchhHHHHHHHHHHhccCC---CCCcceeeeeeeeccCceEEEEee
Q 005257          367 SEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLK---HKSLVGLRGWCKREKGSLMLVYDY  443 (705)
Q Consensus       367 ~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~~~~~~~~~Ei~~l~~l~---Hpniv~l~g~~~~~~~~~~lV~E~  443 (705)
                      ...+.|+.|....+|+...  ++..+++|+....   ....+..|...|+.|.   ...+.+++.++.. .+..++||||
T Consensus        39 ~~~~~l~gG~~n~~y~v~~--~~~~~vlK~~~~~---~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~-~g~~~lvme~  112 (312)
T 3jr1_A           39 KHKEKLYSGEMNEIWLIND--EVQTVFVKINERS---YRSMFRAEADQLALLAKTNSINVPLVYGIGNS-QGHSFLLLEA  112 (312)
T ss_dssp             CEEEEECCSSSSEEEEEES--SSCEEEEEEEEGG---GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEEC-SSEEEEEEEC
T ss_pred             eeeEEeCCccceeeeEEEE--CCCeEEEEeCCcc---cHHHHHHHHHHHHHHHhhCCCCcceEEEEeec-CCceEEEEEe
Confidence            3456799999999999875  3567889976532   3566888999998884   2456778877765 5678999999


Q ss_pred             CCCCChhH-----------HHHhcCCCC-------------------cccHHHHH---HHH----------------HHH
Q 005257          444 MENGSLDK-----------WIFQCDGSM-------------------MLSCEERI---RVL----------------KDV  474 (705)
Q Consensus       444 ~~~gsL~~-----------~L~~~~~~~-------------------~l~~~~~~---~i~----------------~qi  474 (705)
                      +++..+..           .|+......                   .-+|.+.+   ++.                ..+
T Consensus       113 l~G~~~~~~~~~~lG~~LA~LH~~~~~~~fG~~~~~~~G~~~q~n~w~~~W~~f~~~~Rl~~~l~~a~~~g~~~~~~~~l  192 (312)
T 3jr1_A          113 LNKSKNKQSSFTIFAEKIAQLHQIQGPDKYGLDFDTWLGPIYQPNDWQTSWAKFFSENRIGWQLQICKEKGLIFGNIDLI  192 (312)
T ss_dssp             CCCCCCCTTHHHHHHHHHHHHHHCCCCSSBBCSSCEEETTEEECCCCBSCHHHHHHHHTHHHHHHHHHHHTCCCSCHHHH
T ss_pred             ccCCCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcCCCCCCcCCHHHHHHHHHHHHHHHHHHHcCCChHHHHHH
Confidence            99876521           223322100                   01343322   111                112


Q ss_pred             HHHH-HHHhc-CCCCCeeecCCCCCCeEEccCCCeeeeeec
Q 005257          475 AAGV-LYLHE-GWEKKVLHRDIKSSNVLLDKEMNGRLGDFG  513 (705)
Q Consensus       475 a~gL-~yLH~-~~~~~iiHrDLkp~NILld~~~~~kL~DFG  513 (705)
                      +..+ ..|.. .....++|+|+.+.|++++.++ +.|.|+.
T Consensus       193 ~~~l~~~L~~~~~~~~l~HgD~~~~N~l~~~~~-~~~iD~~  232 (312)
T 3jr1_A          193 VQIVADTLSKHNPKPSILHGNLWIENCIQVDDK-IFVCNPA  232 (312)
T ss_dssp             HHHHHHHHTTCCCCCEEECSSCSGGGEEEETTE-EEECSCC
T ss_pred             HHHHHHHhccCCCCceeEeCCCCcCcEeecCCC-eEEEcCc
Confidence            2122 23421 2357899999999999999887 8888873

>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}

Probab=96.99  E-value=0.0026  Score=69.23  Aligned_cols=32  Identities=13%  Similarity=0.298  Sum_probs=28.3

Q ss_pred             CCCeeecCCCCCCeEEccCCCeeeeeeccceec
Q 005257          486 EKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMH  518 (705)
Q Consensus       486 ~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~  518 (705)
                      ...++|+|++|.|||++.++ ++|.||+.+...
T Consensus       231 ~~~liHGDl~~~Nil~~~~~-~~lID~e~a~~G  262 (420)
T 2pyw_A          231 AQALIHGDLHTGSVMVTQDS-TQVIDPEFSFYG  262 (420)
T ss_dssp             CCEEECSCCSGGGEEECSSC-EEECCCTTCEEE
T ss_pred             CCeEEecCCCCCcEEEeCCC-CEEEeCcccccC
Confidence            48899999999999998776 999999988753

>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6

Probab=96.72  E-value=0.0056  Score=63.63  Aligned_cols=159  Identities=14%  Similarity=0.061  Sum_probs=86.1

Q ss_pred             cCHHHHHHHhCCCCc-----ceEEeecCceEEEEEEEcCCCeEEEEEEeccCCchhHHHHHHHHHHhccCCCCCc--cee
Q 005257          354 ITYQEIEAATKGFSE-----ENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSL--VGL  426 (705)
Q Consensus       354 ~~~~el~~at~~f~~-----~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~~~~~~~~~Ei~~l~~l~Hpni--v~l  426 (705)
                      ++.+++...-..|..     .+.|+.|....+|+....+ + .+++|.....  .....+..|+.++..|+...+  .++
T Consensus         7 ~~~~~l~~~l~~~~~~~~~~~~~i~~G~~n~~~~v~~~~-g-~~vlk~~~~~--~~~~~l~~e~~~l~~L~~~g~~vP~~   82 (322)
T 2ppq_A            7 ITEDELRNFLTQYDVGSLTSYKGIAEGVENSNFLLHTTK-D-PLILTLYEKR--VEKNDLPFFLGLMQHLAAKGLSCPLP   82 (322)
T ss_dssp             CCHHHHHHHHTTBCCCCEEEEEEECC---EEEEEEEESS-C-CEEEEEECC-----CCHHHHHHHHHHHHHHTTCCCCCB
T ss_pred             CCHHHHHHHHHhCCCCcceEeeccCCCcccceEEEEeCC-c-cEEEEEeCCC--CCHHHHHHHHHHHHHHHHCCCCCCcc
Confidence            444555555555544     3456678889999998753 3 5889987642  122345567777777642222  222


Q ss_pred             eee-----eeeccCceEEEEeeCCCCChhH--------------HHHhcC----CC-----CcccHHHHHHH--------
Q 005257          427 RGW-----CKREKGSLMLVYDYMENGSLDK--------------WIFQCD----GS-----MMLSCEERIRV--------  470 (705)
Q Consensus       427 ~g~-----~~~~~~~~~lV~E~~~~gsL~~--------------~L~~~~----~~-----~~l~~~~~~~i--------  470 (705)
                      +..     +....+..+++++|++|..+..              .++...    ..     ....|...+.-        
T Consensus        83 ~~~~~g~~~~~~~g~~~~l~~~l~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~  162 (322)
T 2ppq_A           83 LPRKDGELLGELSGRPAALISFLEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADEV  162 (322)
T ss_dssp             CCBTTCCSCEEETTEEEEEEECCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGGT
T ss_pred             cCCCCCCEEEEECCEEEEEEEeCCCcCCCCCCHHHHHHHHHHHHHHHHHhccCCCcccCccChHHHHHHHHHHHHHHHhh
Confidence            221     1111346789999998865421              112111    00     00123221110        


Q ss_pred             ----HHHHHHHHHHHhcC----CCCCeeecCCCCCCeEEccCCCeeeeeeccce
Q 005257          471 ----LKDVAAGVLYLHEG----WEKKVLHRDIKSSNVLLDKEMNGRLGDFGLAR  516 (705)
Q Consensus       471 ----~~qia~gL~yLH~~----~~~~iiHrDLkp~NILld~~~~~kL~DFGla~  516 (705)
                          ...+...+..+++.    ....++|+|+.+.|||++.+..+.|.||+.+.
T Consensus       163 ~~~l~~~l~~~~~~l~~~~~~~~~~~liHgDl~~~Nil~~~~~~~~lIDf~~a~  216 (322)
T 2ppq_A          163 EKGLREEIRPEIDYLAAHWPKDLPAGVIHADLFQDNVFFLGDELSGLIDFYFAC  216 (322)
T ss_dssp             STTHHHHHHHHHHHHHHHCCCSSCEEEECSCCCGGGEEEETTEEEEECCCTTCE
T ss_pred             hhhhHHHHHHHHHHHHhhCcccCCcccCCCCCCccCEEEeCCceEEEecchhcc
Confidence                01234455555532    24679999999999999877556799999875

>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}

Probab=96.58  E-value=0.0067  Score=62.58  Aligned_cols=138  Identities=12%  Similarity=0.027  Sum_probs=74.7

Q ss_pred             ceEEeecCceEEEEEEEcCCCeEEEEEEeccCCchhHHHHHHHHHHhccCCCCCcc-eeeeeeeeccCceEEEEeeC-CC
Q 005257          369 ENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLV-GLRGWCKREKGSLMLVYDYM-EN  446 (705)
Q Consensus       369 ~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~~~~~~~~~Ei~~l~~l~Hpniv-~l~g~~~~~~~~~~lV~E~~-~~  446 (705)
                      .+.|+.|....+|+.      ..+++|+....... .....+|..+++.+....+. ++++.+   ...-++++||+ ++
T Consensus        23 i~~l~gG~tN~~~~~------~~~vlR~~~~~~~~-~~~r~~E~~~l~~l~~~g~~P~~~~~~---~~~~~~v~e~i~~g   92 (301)
T 3dxq_A           23 PLERLGGLTNLVFRA------GDLCLRIPGKGTEE-YINRANEAVAAREAAKAGVSPEVLHVD---PATGVMVTRYIAGA   92 (301)
T ss_dssp             CEEEESCSSEEEEEE------TTEEEEEECC-----CCCHHHHHHHHHHHHHTTSSCCEEEEC---TTTCCEEEECCTTC
T ss_pred             eeEcCCcccccccee------eeEEEECCCCCccc-eeCHHHHHHHHHHHHHcCCCCceEEEE---CCCCEEEEeecCCC
Confidence            678999999999999      34888876543211 11234677777777533343 455433   22346899999 65


Q ss_pred             CChhHH------------------HHhcCCC--Cccc-HHHHHHHHHH--------------HHHHHH----HHh-cCCC
Q 005257          447 GSLDKW------------------IFQCDGS--MMLS-CEERIRVLKD--------------VAAGVL----YLH-EGWE  486 (705)
Q Consensus       447 gsL~~~------------------L~~~~~~--~~l~-~~~~~~i~~q--------------ia~gL~----yLH-~~~~  486 (705)
                      .+|...                  ++.....  .... +..+..+...              +...+.    .|. ....
T Consensus        93 ~~l~~~~~~~~~~~~~~~~~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~~  172 (301)
T 3dxq_A           93 QTMSPEKFKTRPGSPARAGEAFRKLHGSGAVFPFRFELFAMIDDYLKVLSTKNVTLPAGYHDVVREAGGVRSALAAHPLP  172 (301)
T ss_dssp             EECCHHHHHHSTTHHHHHHHHHHHHHTSCCCCSSBCCHHHHHHHHHHHHC--CCCCCTTHHHHHHHHHHHHHHHHSSCCC
T ss_pred             ccCCHhhHhhhHHHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHhhcCCCchhhHHHHHHHHHHHHHHHHhcCCC
Confidence            444310                  1111100  0011 1111111110              111111    111 1123


Q ss_pred             CCeeecCCCCCCeEEccCCCeeeeeecccee
Q 005257          487 KKVLHRDIKSSNVLLDKEMNGRLGDFGLARM  517 (705)
Q Consensus       487 ~~iiHrDLkp~NILld~~~~~kL~DFGla~~  517 (705)
                      ..++|+|+.+.||+ ..++.+.|.||..+..
T Consensus       173 ~~l~HgDl~~~Nil-~~~~~~~lID~e~a~~  202 (301)
T 3dxq_A          173 LAACHCDPLCENFL-DTGERMWIVDWEYSGM  202 (301)
T ss_dssp             CEEECSCCCGGGEE-ECSSCEEECCCTTCEE
T ss_pred             ceeeccCCCcCCEE-ECCCCEEEEecccccC
Confidence            56999999999999 5667789999998764

>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8

Probab=96.53  E-value=0.0051  Score=67.11  Aligned_cols=74  Identities=15%  Similarity=0.134  Sum_probs=49.7

Q ss_pred             ceEEeecCceEEEEEEEcC-------CCeEEEEEEeccCCchhHHHHHHHHHHhccCCCCCc-ceeeeeeeeccCceEEE
Q 005257          369 ENVIGVGGNGKVYKGVLEG-------GGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSL-VGLRGWCKREKGSLMLV  440 (705)
Q Consensus       369 ~~~LG~G~fg~Vy~~~~~~-------~~~~vavK~i~~~~~~~~~~~~~Ei~~l~~l~Hpni-v~l~g~~~~~~~~~~lV  440 (705)
                      .+.|+.|-...+|+....+       .+..+++|+.....  ....+.+|..++..|...++ .++++.+.  +   .+|
T Consensus        78 v~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~~--~~~~li~E~~~l~~L~~~g~~P~l~~~~~--~---g~v  150 (429)
T 1nw1_A           78 ISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNPE--TESHLVAESVIFTLLSERHLGPKLYGIFS--G---GRL  150 (429)
T ss_dssp             EEEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSCC--CHHHHHHHHHHHHHHHHTTSSSCEEEEET--T---EEE
T ss_pred             EEEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCCC--cHHHHHHHHHHHHHHHhCCCCCcEEEEeC--C---CEE
Confidence            4568888889999998753       24678899874321  12556689999988854445 45565432  2   389


Q ss_pred             EeeCCCCCh
Q 005257          441 YDYMENGSL  449 (705)
Q Consensus       441 ~E~~~~gsL  449 (705)
                      +||++|.+|
T Consensus       151 ~e~l~G~~l  159 (429)
T 1nw1_A          151 EEYIPSRPL  159 (429)
T ss_dssp             ECCCCEEEC
T ss_pred             EEEeCCccc
Confidence            999986444

>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6

Probab=96.36  E-value=0.036  Score=57.52  Aligned_cols=144  Identities=16%  Similarity=0.157  Sum_probs=80.3

Q ss_pred             ceEEeecCceEEEEEEEcCCCeEEEEEEeccCCchhHHHHHHHHHHhccCCCCC--cceeeee----eeeccCceEEEEe
Q 005257          369 ENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKS--LVGLRGW----CKREKGSLMLVYD  442 (705)
Q Consensus       369 ~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~~~~~~~~~Ei~~l~~l~Hpn--iv~l~g~----~~~~~~~~~lV~E  442 (705)
                      ...|+ |....||+.... +|+.+++|...... .....+..|..++..|....  +.+++..    .....+..+++||
T Consensus        31 ~~~l~-g~~n~~y~v~~~-~g~~~vlK~~~~~~-~~~~~~~~E~~~~~~L~~~g~~vp~~~~~~g~~~~~~~g~~~~l~~  107 (328)
T 1zyl_A           31 LTPLN-SYENRVYQFQDE-DRRRFVVKFYRPER-WTADQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNHQGFYFAVFP  107 (328)
T ss_dssp             CEEEC-CSSSEEEEECCT-TCCCEEEEEECTTT-SCHHHHHHHHHHHHHHHHTTCSBCCCCCBTTBSCEEETTEEEEEEE
T ss_pred             EEeec-CcccceEEEEcC-CCCEEEEEEcCCCC-CCHHHHHHHHHHHHHHHHcCCeecceeecCCcEEEEECCEEEEEEE
Confidence            34577 888899988664 35579999885331 13455667888877774222  3333332    1111445678999


Q ss_pred             eCCCCChhH-----------H---HHhc----C--CCCcccHHHH----------------------HHHHHHHHHHHHH
Q 005257          443 YMENGSLDK-----------W---IFQC----D--GSMMLSCEER----------------------IRVLKDVAAGVLY  480 (705)
Q Consensus       443 ~~~~gsL~~-----------~---L~~~----~--~~~~l~~~~~----------------------~~i~~qia~gL~y  480 (705)
                      +++|..+..           .   ++..    .  ....+.+...                      ...+.+++..+.-
T Consensus       108 ~i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~  187 (328)
T 1zyl_A          108 SVGGRQFEADNIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLFEDATLIPSGLKAAFLKATDELIAAVTA  187 (328)
T ss_dssp             CCCCEECCSSCHHHHHHHHHHHHHHHHHHTSSCCSSSCBCSHHHHTHHHHHHHHTCSSSCTTTHHHHHHHHHHHHHHHHH
T ss_pred             ecCCCCCCCCCHHHHHHHHHHHHHHHHhhccCCCccCCCCCHHHHHhhHHHHHhhcCcCCHHHHHHHHHHHHHHHHHHHH
Confidence            998754320           1   1111    0  0111222111                      1111122222222


Q ss_pred             Hhc-CCCCCeeecCCCCCCeEEccCCCeeeeeecccee
Q 005257          481 LHE-GWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARM  517 (705)
Q Consensus       481 LH~-~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~  517 (705)
                      +-. .....++|+|+++.|||++ + .+.|.||+.+..
T Consensus       188 ~~~~~~~~~l~HgD~~~~Nil~~-~-~~~lIDfe~a~~  223 (328)
T 1zyl_A          188 HWREDFTVLRLHGDCHAGNILWR-D-GPMFVDLDDARN  223 (328)
T ss_dssp             HCCSCSCCEECCSSCSGGGEEES-S-SEEECCCTTCCE
T ss_pred             HhhhcCCeeeeeCCCCcccEeEc-C-CCEEEECCCCCc
Confidence            211 1246789999999999999 4 899999998753

>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*

Probab=96.33  E-value=0.007  Score=64.82  Aligned_cols=143  Identities=18%  Similarity=0.142  Sum_probs=84.0

Q ss_pred             ceEEeecCceEEEEEEEcC-------CCeEEEEEEeccCCchhHHHHHHHHHHhccCCCCCc-ceeeeeeeeccCceEEE
Q 005257          369 ENVIGVGGNGKVYKGVLEG-------GGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSL-VGLRGWCKREKGSLMLV  440 (705)
Q Consensus       369 ~~~LG~G~fg~Vy~~~~~~-------~~~~vavK~i~~~~~~~~~~~~~Ei~~l~~l~Hpni-v~l~g~~~~~~~~~~lV  440 (705)
                      .+.|..|-...+|+.....       ++..+++|+... .........+|..+++.|.-.++ .++++.+.  +   .+|
T Consensus        55 v~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~-~~~~~~~~~rE~~vl~~L~~~gv~P~ll~~~~--~---g~v  128 (379)
T 3feg_A           55 VYPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGA-ILQGVDSLVLESVMFAILAERSLGPQLYGVFP--E---GRL  128 (379)
T ss_dssp             CEEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC----CCHHHHHHHHHHHHHHHHTTSSCCEEEEET--T---EEE
T ss_pred             EEEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCC-ccchHHHHHHHHHHHHHHHhcCCCCeEEEEcC--C---ccE
Confidence            4567778888999998752       346789987532 22234566789999988854344 44555442  2   389


Q ss_pred             EeeCCCCChhHH-----------------HHhcCC--CCcc--cHHHHHHHHHHHHH-------------------HHHH
Q 005257          441 YDYMENGSLDKW-----------------IFQCDG--SMML--SCEERIRVLKDVAA-------------------GVLY  480 (705)
Q Consensus       441 ~E~~~~gsL~~~-----------------L~~~~~--~~~l--~~~~~~~i~~qia~-------------------gL~y  480 (705)
                      |||++|..|..-                 |+..+.  ....  -+.++.++..++..                   .+..
T Consensus       129 ~e~i~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~~~~~~~~l~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~~~~~  208 (379)
T 3feg_A          129 EQYIPSRPLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEMYSLKDEMGN  208 (379)
T ss_dssp             EECCSEEECCGGGGGCHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSCCSCCHHHHTTHHHHHHH
T ss_pred             EEEecCccCChhHhCCHHHHHHHHHHHHHHhCCCCCCCCCcccHHHHHHHHHHHHHhccCcccchhhhhhhHHHHHHHHH
Confidence            999998655311                 111110  1111  24555555544322                   2233


Q ss_pred             Hh----c-CCCCCeeecCCCCCCeEEccC----CCeeeeeecccee
Q 005257          481 LH----E-GWEKKVLHRDIKSSNVLLDKE----MNGRLGDFGLARM  517 (705)
Q Consensus       481 LH----~-~~~~~iiHrDLkp~NILld~~----~~~kL~DFGla~~  517 (705)
                      |.    . .....++|+|+.+.||+++.+    +.+.|.||..+..
T Consensus       209 L~~~L~~~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~~  254 (379)
T 3feg_A          209 LRKLLESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSSY  254 (379)
T ss_dssp             HHHHHHTSCCCEEEECSCCCGGGEEEESCC---CCEEECCCTTCEE
T ss_pred             HHHHHhhcCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCCc
Confidence            32    1 124579999999999999876    6899999998853

>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}

Probab=96.30  E-value=0.015  Score=63.90  Aligned_cols=75  Identities=13%  Similarity=0.018  Sum_probs=47.8

Q ss_pred             ceEEeecCceEEEEEEEcCCCeEEEEEEeccCCchhHHHHHHHHHHhccCCCCCcc-eeeeeeeeccCceEEEEeeCCCC
Q 005257          369 ENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLV-GLRGWCKREKGSLMLVYDYMENG  447 (705)
Q Consensus       369 ~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~~~~~~~~~Ei~~l~~l~Hpniv-~l~g~~~~~~~~~~lV~E~~~~g  447 (705)
                      .+.|+.|-...+|+....+.+..+++|+........ -+-.+|..++..|...++. ++++.+ . .   .+||||++|.
T Consensus       113 i~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~~~~-idR~~E~~vl~~L~~~gl~P~ll~~~-~-~---G~v~e~I~G~  186 (458)
T 2qg7_A          113 FQIINGGITNILIKVKDMSKQAKYLIRLYGPKTDEI-INREREKKISCILYNKNIAKKIYVFF-T-N---GRIEEFMDGY  186 (458)
T ss_dssp             EEEECC--CEEEEEEEETTTTEEEEEEEECC-CCSC-SCHHHHHHHHHHHTTSSSBCCEEEEE-T-T---EEEEECCCSE
T ss_pred             EEEcCCCeEeEEEEEEECCCCceEEEEECCCChhhh-cCHHHHHHHHHHHHhcCCCCCEEEEe-C-C---eEEEEeeCCc
Confidence            457888889999999886545788899764322111 1125788888888655554 466554 2 2   3599999875


Q ss_pred             Ch
Q 005257          448 SL  449 (705)
Q Consensus       448 sL  449 (705)
                      +|
T Consensus       187 ~l  188 (458)
T 2qg7_A          187 AL  188 (458)
T ss_dssp             EC
T ss_pred             cC
Confidence            54

>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}

Probab=95.98  E-value=0.034  Score=57.98  Aligned_cols=33  Identities=27%  Similarity=0.340  Sum_probs=28.3

Q ss_pred             CCCeeecCCCCCCeEEccC----CCeeeeeeccceec
Q 005257          486 EKKVLHRDIKSSNVLLDKE----MNGRLGDFGLARMH  518 (705)
Q Consensus       486 ~~~iiHrDLkp~NILld~~----~~~kL~DFGla~~~  518 (705)
                      ...++|+|+.+.|||++.+    ..+.|.||+.+...
T Consensus       182 ~~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~G  218 (333)
T 3csv_A          182 DMVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKLG  218 (333)
T ss_dssp             CCEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEEE
T ss_pred             CCeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCcC
Confidence            4689999999999999874    67899999988643

>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*

Probab=95.58  E-value=0.021  Score=60.67  Aligned_cols=75  Identities=9%  Similarity=0.099  Sum_probs=43.3

Q ss_pred             ceEEeecCceEEEEEEEcCC--------CeEEEEEEeccCCchhHHHHHHHHHHhccCCCCCcc-eeeeeeeeccCceEE
Q 005257          369 ENVIGVGGNGKVYKGVLEGG--------GAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLV-GLRGWCKREKGSLML  439 (705)
Q Consensus       369 ~~~LG~G~fg~Vy~~~~~~~--------~~~vavK~i~~~~~~~~~~~~~Ei~~l~~l~Hpniv-~l~g~~~~~~~~~~l  439 (705)
                      .+.|+.|....+|+....+.        +..+++|+..... ....+...|..+++.|...+++ ++++..   .+  ++
T Consensus        38 ~~~l~~G~~N~~y~v~~~~~~~~~~~~~~~~~vlRi~~~~~-~~~~~~~~E~~~l~~L~~~g~~P~~~~~~---~~--~~  111 (369)
T 3c5i_A           38 VKQILSGLTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHV-DELYNTISEFEVYKTMSKYKIAPQLLNTF---NG--GR  111 (369)
T ss_dssp             EEEC----CCEEEEEEECHHHHTTCTTSCCEEEEEECCTTG-GGTSCHHHHHHHHHHHHHTTSSCCEEEEE---TT--EE
T ss_pred             EEEeCCcccceEEEEEeCCCCcccccCCCceEEEEecCCCc-cceecHHHHHHHHHHHHhcCCCCceEEec---CC--cE
Confidence            34677888889999987531        2578888764322 1111235788888887544443 455432   22  68


Q ss_pred             EEeeCCCCCh
Q 005257          440 VYDYMENGSL  449 (705)
Q Consensus       440 V~E~~~~gsL  449 (705)
                      ||||++|..+
T Consensus       112 v~e~i~G~~l  121 (369)
T 3c5i_A          112 IEEWLYGDPL  121 (369)
T ss_dssp             EEECCCSEEC
T ss_pred             EEEEecCCcC
Confidence            9999987543

>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*

Probab=95.04  E-value=0.24  Score=51.83  Aligned_cols=32  Identities=25%  Similarity=0.311  Sum_probs=28.3

Q ss_pred             CCCeeecCCCCCCeEEccCCCeeeeeecccee
Q 005257          486 EKKVLHRDIKSSNVLLDKEMNGRLGDFGLARM  517 (705)
Q Consensus       486 ~~~iiHrDLkp~NILld~~~~~kL~DFGla~~  517 (705)
                      ...++|+|+.+.||+++.++.+.|.||+.+..
T Consensus       205 ~~~~~HgD~~~~N~l~~~~~~~~~iD~e~~~~  236 (339)
T 3i1a_A          205 KYVLCHSDIHAGNVLVGNEESIYIIDWDEPML  236 (339)
T ss_dssp             GCEEECSCCCGGGEEECGGGCEEECCCSSCEE
T ss_pred             CceeEeCCCCcCCEEEeCCCeEEEEECCCCee
Confidence            46799999999999999888899999987764

>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A

Probab=94.50  E-value=0.042  Score=53.54  Aligned_cols=103  Identities=13%  Similarity=0.068  Sum_probs=67.1

Q ss_pred             CChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecCCCCccee
Q 005257          447 GSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVAST  526 (705)
Q Consensus       447 gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~~~~~~~~  526 (705)
                      -||.+.|...+.  +++++++|.++.|.+.+|.-+-..  ..-..+=+.|..|++..+|++.+.+ ..+.          
T Consensus        33 vSL~eIL~~~~~--PlsEEqaWALc~Qc~~~L~~~~~~--~~~~~~i~~~~~i~l~~dG~V~f~~-~~s~----------   97 (229)
T 2yle_A           33 LSLEEILRLYNQ--PINEEQAWAVCYQCCGSLRAAARR--RQPRHRVRSAAQIRVWRDGAVTLAP-AADD----------   97 (229)
T ss_dssp             EEHHHHHHHHTS--CCCHHHHHHHHHHHHHHHHHHHHT--TCCCCCCCSGGGEEEETTSCEEECC-C-------------
T ss_pred             ccHHHHHHHcCC--CcCHHHHHHHHHHHHHHHHhhhhc--ccCCceecCCcceEEecCCceeccc-cccc----------
Confidence            389999977654  799999999999999998776210  1111333457899999999887654 1110          


Q ss_pred             eeeeccccCCCccccccCCCCccccEEEEehhHHHHhhCCCC
Q 005257          527 TRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRP  568 (705)
Q Consensus       527 ~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~P  568 (705)
                         .....+.+||... ...+.+.=|||+|+++|.-+-=..|
T Consensus        98 ---~~~~~~~~pe~~~-~~~te~~~IysLG~tLY~ALDygL~  135 (229)
T 2yle_A           98 ---AGEPPPVAGKLGY-SQCMETEVIESLGIIIYKALDYGLK  135 (229)
T ss_dssp             ------------CCSS-SSSCHHHHHHHHHHHHHHHHTTTCC
T ss_pred             ---ccccCCCChhhcc-ccchHHHHHHHHHHHHHHHhhcCCC
Confidence               1122466888764 3557888999999999998874443

>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}

Probab=92.88  E-value=0.14  Score=55.40  Aligned_cols=142  Identities=11%  Similarity=0.114  Sum_probs=83.3

Q ss_pred             ceEEeecCceEEEEEEEcCC-------CeEEEEEEeccCCchhHHHHHHHHHHhccCCCCCcc-eeeeeeeeccCceEEE
Q 005257          369 ENVIGVGGNGKVYKGVLEGG-------GAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLV-GLRGWCKREKGSLMLV  440 (705)
Q Consensus       369 ~~~LG~G~fg~Vy~~~~~~~-------~~~vavK~i~~~~~~~~~~~~~Ei~~l~~l~Hpniv-~l~g~~~~~~~~~~lV  440 (705)
                      .+.|..|-...+|+......       +..+++|+..... ...-+..+|..+++.|...+++ ++++.+   .+  ++|
T Consensus        75 v~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlRi~g~~t-~~~idR~~E~~~l~~L~~~gi~P~l~~~~---~~--~~I  148 (424)
T 3mes_A           75 VKQIFSGLTNQLFVVSIVNESMSLSLKHPRILFRIYGKHV-GKFYDSKVELDVFRYLSNINIAPNIIADF---PE--GRI  148 (424)
T ss_dssp             EEEECCCSSSEEEEEEECCC-----CCCSEEEEEECCCCC--CCCCHHHHHHHHHHHHHTTSSCCEEEEE---TT--EEE
T ss_pred             EEEcCCCcccceEEEEeCCCcccccCCCCeEEEEECCCCc-chhcCHHHHHHHHHHHHhcCCCCCEEEEc---CC--CEE
Confidence            45677788889999987631       4678888764322 1111235788888887543443 444422   22  689


Q ss_pred             EeeCCCCChhH--------------H---HHh--c-----C---CCCcccHHHHHHHHHHH-------------------
Q 005257          441 YDYMENGSLDK--------------W---IFQ--C-----D---GSMMLSCEERIRVLKDV-------------------  474 (705)
Q Consensus       441 ~E~~~~gsL~~--------------~---L~~--~-----~---~~~~l~~~~~~~i~~qi-------------------  474 (705)
                      |||++|..|..              .   |+.  .     .   ...+..+.++.++..++                   
T Consensus       149 ~efI~G~~l~~~~l~~~~~~~~ia~~La~LH~~~~~~~~L~~~~~~~p~~~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l  228 (424)
T 3mes_A          149 EEFIDGEPLTTKQLQLTHICVEVAKNMGSLHIINSKRADFPSRFDKEPILFKRIYLWREEAKIQVSKNNFQIDKELYSKI  228 (424)
T ss_dssp             EECCCSEECCTGGGGSHHHHHHHHHHHHHHHTHHHHCTTSCTTSCCSCCHHHHHHHHHHHHHHHHHTCC--CCHHHHHHH
T ss_pred             EEEeCCccCChhhcCCHHHHHHHHHHHHHHhcCchhhccCccccCCCCcHHHHHHHHHHHHHHhhcccchhhccccHHHH
Confidence            99999866421              0   111  0     1   11112244444443322                   


Q ss_pred             HHHHHHHhc---------------------CCCCCeeecCCCCCCeEEccCCCeeeeeecccee
Q 005257          475 AAGVLYLHE---------------------GWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARM  517 (705)
Q Consensus       475 a~gL~yLH~---------------------~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~  517 (705)
                      ...+.+|.+                     .....++|+|+.+.||+ +.++.+.|.||..+..
T Consensus       229 ~~e~~~L~~~l~~~~~~~~~r~~~~~~~~~~~~~~~~H~D~~~~N~l-~~~~~~~~IDwe~a~~  291 (424)
T 3mes_A          229 LEEIDQLEELIMGGEKFSMERALELKLYSPAFSLVFAHNDLQENNLL-QTQNNIRMIDYEYSAI  291 (424)
T ss_dssp             HHHHHHHHHHHHTSSCCCHHHHHHHHTTCGGGCEEEECSCCCGGGEE-ECSSCEEECCCTTCEE
T ss_pred             HHHHHHHHHHHhhhcccccccccccccccCCCCceEECCCCCcccee-cCCCcEEEEecccCCc
Confidence            222333321                     12356999999999999 7788899999998863

>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*

Probab=89.14  E-value=1.1  Score=48.06  Aligned_cols=30  Identities=27%  Similarity=0.351  Sum_probs=25.1

Q ss_pred             CeeecCCCCCCeEE------ccCCCeeeeeecccee
Q 005257          488 KVLHRDIKSSNVLL------DKEMNGRLGDFGLARM  517 (705)
Q Consensus       488 ~iiHrDLkp~NILl------d~~~~~kL~DFGla~~  517 (705)
                      .++|+|+.+.|||+      +++..++++||..|..
T Consensus       245 vfcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~~  280 (401)
T 3g15_A          245 VFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY  280 (401)
T ss_dssp             EEECSCCCGGGEEEETTGGGCSSCCEEECCCTTCEE
T ss_pred             eeEEecCCCCeEEEecCcccCcCCeEEEechHhccC
Confidence            46799999999999      4456799999998854

>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}

Probab=83.96  E-value=0.11  Score=36.76  Aligned_cols=22  Identities=32%  Similarity=0.436  Sum_probs=9.6

Q ss_pred             EEEeeehhHHHHHHHHHHHHHH
Q 005257          307 IAGVTVGGLFIIVAVVLCSLFL  328 (705)
Q Consensus       307 ~~~~~~~~~~~~~~~~~~~~~~  328 (705)
                      |++.+++++++++++++.++++
T Consensus        13 IA~gVVgGv~~~~ii~~~~~~~   34 (44)
T 2ks1_B           13 IATGMVGALLLLLVVALGIGLF   34 (44)
T ss_dssp             STHHHHHHHHHHHHHHHHHHHH
T ss_pred             EEeehhHHHHHHHHHHHHHHHH
Confidence            3444444444444444443333

>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}

Probab=81.61  E-value=0.1  Score=36.72  Aligned_cols=23  Identities=43%  Similarity=0.609  Sum_probs=10.4

Q ss_pred             EEEEeeehhHHHHHHHHHHHHHH
Q 005257          306 FIAGVTVGGLFIIVAVVLCSLFL  328 (705)
Q Consensus       306 ~~~~~~~~~~~~~~~~~~~~~~~  328 (705)
                      .+++.+++++++++++++..+++
T Consensus        11 aIA~gVVgGv~~v~ii~~~~~~~   33 (44)
T 2l2t_A           11 LIAAGVIGGLFILVIVGLTFAVY   33 (44)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             eEEEeehHHHHHHHHHHHHHHHH
Confidence            34444455555444444444333

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*

Probab=81.12  E-value=0.69  Score=47.34  Aligned_cols=27  Identities=19%  Similarity=0.142  Sum_probs=24.1

Q ss_pred             HHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 005257          609 ERVLHLGLLCAYPDPRARPTMRQVVKV  635 (705)
Q Consensus       609 ~~l~~l~~~Cl~~dP~~RPs~~evl~~  635 (705)
                      ..+.+++..||+.||++|||+.|++++
T Consensus       275 ~~~~~li~~~L~~dP~~Rpt~~ell~h  301 (311)
T 3niz_A          275 QEGIDLLSNMLCFDPNKRISARDAMNH  301 (311)
T ss_dssp             HHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred             HHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence            457889999999999999999999873

>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A

Probab=81.11  E-value=0.16  Score=55.70  Aligned_cols=60  Identities=2%  Similarity=-0.019  Sum_probs=17.0

Q ss_pred             ceEEeecCceEEEEEEEcCCCeEEEE------EEeccC--CchhHHHHHHHHHHhccCCCCCcceeeeeee
Q 005257          369 ENVIGVGGNGKVYKGVLEGGGAEIAV------KRISHE--NDGGTRAFLAEISSLGRLKHKSLVGLRGWCK  431 (705)
Q Consensus       369 ~~~LG~G~fg~Vy~~~~~~~~~~vav------K~i~~~--~~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~  431 (705)
                      .+.||   ||.||+|.+.....+|||      |..+..  ..+....|.+|..++..++|||+++.+++..
T Consensus       147 ~~~lG---fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~~~~~e~~~~~~rea~l~~~~~H~niv~~h~f~~  214 (463)
T 3cxl_A          147 YEHVG---YTTLNREPAYKKHMPVLKETHDERDSTGQDGVSEKRLTSLVRRATLKENEQIPKYEKIHNFKV  214 (463)
T ss_dssp             TTTSS---BCCC---------CCBGGGC-----------------------------------CBCCCEEE
T ss_pred             cccCC---chhhhcccccccCCchhhhhccCccccccccccccccccccccccccccccccccCCCcceEE
Confidence            44566   999999999765567888      765432  2334457889999999999999999988654

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	705
d1uwha_	276	d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens)	3e-63
d1qpca_	272	d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Hom	2e-60
d1hqla_	236	b.29.1.1 (A:) Legume lectin {Griffonia simplicifol	4e-60
d1g9fa_	251	b.29.1.1 (A:) Legume lectin {Soybean (Glycine max)	7e-60
d1opja_	287	d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mou	2e-59
d1g7ya_	253	b.29.1.1 (A:) Legume lectin {Horse gram (Dolichos	8e-59
d1jpaa_	299	d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mou	9e-59
d1sm2a_	263	d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Hu	7e-58
d1g8wa_	233	b.29.1.1 (A:) Phytohemagglutinin-L, PHA-L, also ar	6e-57
d1gzca_	239	b.29.1.1 (A:) Legume lectin {Cockspur coral tree (	7e-57
d1fmka3	285	d.144.1.7 (A:249-533) c-src tyrosine kinase {Human	1e-56
d1qnwa_	237	b.29.1.1 (A:) Legume lectin {Furze (Ulex europaeus	1e-56
d1mqba_	283	d.144.1.7 (A:) epha2 receptor tyrosine kinase {Hum	5e-56
d1byga_	262	d.144.1.7 (A:) Carboxyl-terminal src kinase (csk)	5e-56
d1r0pa_	311	d.144.1.7 (A:) Hepatocyte growth factor receptor,	9e-56
d1ukga_	241	b.29.1.1 (A:) Legume lectin {Bloodwood tree (Ptero	1e-55
d1leda_	243	b.29.1.1 (A:) Legume lectin {West-central african	1e-55
d2d3sa1	237	b.29.1.1 (A:1-237) Legume lectin {Winged bean (Pso	1e-55
d1s9ja_	322	d.144.1.7 (A:) Dual specificity mitogen-activated	2e-55
d1k2pa_	258	d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Hum	2e-55
d1u59a_	285	d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Hum	3e-55
d1f9ka_	234	b.29.1.1 (A:) Legume lectin {Winged bean (Psophoca	4e-55
d1xbba_	277	d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human	5e-55
d1v6ia_	232	b.29.1.1 (A:) Legume lectin {Peanut (Arachis hypog	2e-54
d1lufa_	301	d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n	3e-54
d1avba_	226	b.29.1.1 (A:) Phytohemagglutinin-L, PHA-L, also ar	3e-54
d1vjya_	303	d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human	6e-54
d1fx5a_	240	b.29.1.1 (A:) Legume lectin {Furze (Ulex europaeus	6e-54
g2ltn.1	229	b.29.1.1 (A:,B:) Legume lectin {Garden pea (Pisum	7e-54
d1dbna_	239	b.29.1.1 (A:) Legume lectin {Maackia amurensis, le	8e-54
g1qmo.1	230	b.29.1.1 (A:,E:) Legume lectin {Field bean (Dolich	2e-53
d1t4ha_	270	d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa	9e-53
d1fvra_	309	d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [	5e-52
d2java1	269	d.144.1.7 (A:3-271) Serine/threonine-protein kinas	9e-52
d1t46a_	311	d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens	1e-51
d2j4za1	263	d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur	6e-51
d1u5ra_	309	d.144.1.7 (A:) Serine/threonine protein kinase TAO	6e-51
d1xkka_	317	d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-	1e-50
d1rjba_	325	d.144.1.7 (A:) Fl cytokine receptor {Human (Homo s	2e-50
d1p4oa_	308	d.144.1.7 (A:) Insulin-like growth factor 1 recept	3e-50
d1u46a_	273	d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Hum	5e-50
d1n47a_	233	b.29.1.1 (A:) Legume lectin {Hairy vetch (Vicia vi	6e-50
d1mp8a_	273	d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Huma	1e-49
d1fnya_	237	b.29.1.1 (A:) Legume lectin {Black locust (Robinia	1e-49
d2jfla1	288	d.144.1.7 (A:21-308) STE20-like serine/threonine-p	3e-49
d1dhkb_	204	b.29.1.1 (B:) Phytohemagglutinin-L, PHA-L, also ar	1e-47
d1nvra_	271	d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {	3e-47
d1koaa2	350	d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C	4e-47
d1ywna1	299	d.144.1.7 (A:818-1166) Vascular endothelial growth	7e-47
d1yhwa1	293	d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [	2e-46
d1koba_	352	d.144.1.7 (A:) Twitchin, kinase domain {California	2e-46
d1ioaa_	228	b.29.1.1 (A:) Phytohemagglutinin-L, PHA-L, also ar	2e-46
d1fgka_	299	d.144.1.7 (A:) Fibroblast growth factor receptor 1	1e-45
d1uu3a_	288	d.144.1.7 (A:) 3-phosphoinositide dependent protei	1e-45
d1o6ya_	277	d.144.1.7 (A:) Mycobacterial protein kinase PknB,	1e-41
d1a06a_	307	d.144.1.7 (A:) Calmodulin-dependent protein kinase	6e-41
d1tkia_	321	d.144.1.7 (A:) Titin, kinase domain {Human (Homo s	8e-40
d1phka_	277	d.144.1.7 (A:) gamma-subunit of glycogen phosphory	3e-39
d1omwa3	364	d.144.1.7 (A:186-549) G-protein coupled receptor k	2e-38
d1xjda_	320	d.144.1.7 (A:) Protein kinase C, theta type {Human	3e-38
d3blha1	318	d.144.1.7 (A:8-325) Cell division protein kinase 9	9e-38
d1ua2a_	299	d.144.1.7 (A:) Cell division protein kinase 7, CDK	1e-37
d2ozaa1	335	d.144.1.7 (A:51-385) MAP kinase activated protein	9e-37
d1pmea_	345	d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapien	1e-36
d1ckia_	299	d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus n	2e-36
d1gz8a_	298	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (H	2e-36
d1jksa_	293	d.144.1.7 (A:) Death-associated protein kinase, Da	3e-36
d1fota_	316	d.144.1.7 (A:) cAMP-dependent PK, catalytic subuni	3e-36
d1nlsa_	237	b.29.1.1 (A:) Concanavalin A {Jack bean (Canavalia	3e-36
d1nlsa_	237	b.29.1.1 (A:) Concanavalin A {Jack bean (Canavalia	3e-19
d1q5ka_	350	d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gs	7e-36
d1blxa_	305	d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (H	5e-35
d1xwsa_	273	d.144.1.7 (A:) Proto-oncogene serine/threonine-pro	8e-35
d1csna_	293	d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast	3e-34
d1ob3a_	286	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmod	5e-34
d1o6la_	337	d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sap	5e-33
d1unla_	292	d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (H	6e-33
d1rdqe_	350	d.144.1.7 (E:) cAMP-dependent PK, catalytic subuni	2e-30
d3bqca1	328	d.144.1.7 (A:3-330) Protein kinase CK2, alpha subu	6e-30
d1cm8a_	346	d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo s	2e-29
d2b1pa1	355	d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3	6e-29
d1vzoa_	322	d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5	7e-29
d2gfsa1	348	d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sa	3e-27
d1gv9a_	228	b.29.1.13 (A:) Carbohydrate-recognition domain of	4e-25
d1q8ya_	362	d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces	2e-23
d1zara2	191	d.144.1.9 (A:91-281) Rio2 serine protein kinase C-	4e-17
d2a6va1	218	b.29.1.13 (A:9-226) Emp46p N-terminal domain {Bake	1e-07
d2a6za1	221	b.29.1.13 (A:7-227) Emp47p N-terminal domain {Bake	8e-05

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  209 bits (534), Expect = 3e-63
 Identities = 69/299 (23%), Positives = 128/299 (42%), Gaps = 35/299 (11%)

Query: 343 EDWELEYWPHRITYQEIEAATKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHEND 402
           +DWE+                   +    IG G  G VYKG   G  A + +  ++    
Sbjct: 1   DDWEIPD--------------GQITVGQRIGSGSFGTVYKGKWHGDVA-VKMLNVTAPTP 45

Query: 403 GGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMML 462
              +AF  E+  L + +H +++   G+       L +V  + E  SL   +   +     
Sbjct: 46  QQLQAFKNEVGVLRKTRHVNILLFMGYS--TAPQLAIVTQWCEGSSLYHHLHIIETK--F 101

Query: 463 SCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQ 522
              + I + +  A G+ YLH    K ++HRD+KS+N+ L +++  ++GDFGLA +     
Sbjct: 102 EMIKLIDIARQTAQGMDYLHA---KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWS 158

Query: 523 V-ASTTRVVGTVGYLAPEVF---SSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVE 578
                 ++ G++ ++APEV         S Q+DV+ FGI++ E+++G+ P      N  +
Sbjct: 159 GSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSN--INNRD 216

Query: 579 MVWELMVQGKLLDALDARLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLE 637
            +  ++ +G L   L            +  + +  L   C       RP   Q++  +E
Sbjct: 217 QIIFMVGRGYLSPDLSK-------VRSNCPKAMKRLMAECLKKKRDERPLFPQILASIE 268

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} Length = 272

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  201 bits (513), Expect = 2e-60
 Identities = 71/295 (24%), Positives = 137/295 (46%), Gaps = 35/295 (11%)

Query: 343 EDWELEYWPHRITYQEIEAATKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHEND 402
           ++WE+                +       +G G  G+V+ G   G   ++AVK +  +  
Sbjct: 6   DEWEVPR--------------ETLKLVERLGAGQFGEVWMGYYNGHT-KVAVKSL-KQGS 49

Query: 403 GGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMML 462
               AFLAE + + +L+H+ LV L       +  + ++ +YMENGSL  ++    G + L
Sbjct: 50  MSPDAFLAEANLMKQLQHQRLVRLYAVV--TQEPIYIITEYMENGSLVDFLKTPSG-IKL 106

Query: 463 SCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQ 522
           +  + + +   +A G+ ++ E   +  +HRD++++N+L+   ++ ++ DFGLAR+    +
Sbjct: 107 TINKLLDMAAQIAEGMAFIEE---RNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNE 163

Query: 523 VASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWE 582
             +       + + APE  + G  + ++DV+ FGIL+ E+++  R    G  N    V +
Sbjct: 164 YTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTN--PEVIQ 221

Query: 583 LMVQGKLLDALDARLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLE 637
            + +G  +              ++  E +  L  LC    P  RPT   +  VLE
Sbjct: 222 NLERGYRMV-----------RPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLE 265

>d1hqla_ b.29.1.1 (A:) Legume lectin {Griffonia simplicifolia, lectin I-b4 [TaxId: 3850]} Length = 236

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Legume lectin
species: Griffonia simplicifolia, lectin I-b4 [TaxId: 3850]

 Score =  199 bits (508), Expect = 4e-60
 Identities = 67/264 (25%), Positives = 103/264 (39%), Gaps = 40/264 (15%)

Query: 25  AVDFVFNGFNS---SNLSLYGTATVESRILTLTNST------TFTIGRALYPSKIPTKRP 75
           +V F F  F S    ++   G A   +  L L  +        ++ GRALY   +     
Sbjct: 1   SVSFTFPNFWSDVEDSIIFQGDANTTAGTLQLCKTNQYGTPLQWSAGRALYSDPVQLWDN 60

Query: 76  NSSYVYPFSTSFIFAMAPYKGVLAGHGLVFLFVPFHGIKGATEAQHLGLFNRTNDGN-SS 134
            +  V  F T F F +    G     GL F   P          ++LGLFN++     S 
Sbjct: 61  KTESVASFYTEFTFFLKIT-GNGPADGLAFFLAP-PDSDVKDAGEYLGLFNKSTATQPSK 118

Query: 135 NHVFGVEFDVFKNQEFNDIDENHVGIDVNSLTSVSAHAAGYWPDNQTDSSGSNSNSGTGD 194
           N V  VEFD + N  F +    H+GI+VNS+ SV+                         
Sbjct: 119 NQVVAVEFDTWTNPNFPEPSYRHIGINVNSIVSVAT------------------------ 154

Query: 195 DEKSFKELKLNNGKNYQVWIDYADSFINITMVEAGMKRPKRPLLSVPLNLSGVLEDEMYV 254
             K +++  + +GK     I Y D    I  V          +LS  +++   L + + V
Sbjct: 155 --KRWEDSDIFSGKIATARISY-DGSAEILTVVLSYPDGSDYILSHSVDMRQNLPESVRV 211

Query: 255 GFTAATGQ-LVESHKILAWSFSNT 277
           G +A+TG     +  IL+W FS+ 
Sbjct: 212 GISASTGNNQFLTVYILSWRFSSN 235

>d1g9fa_ b.29.1.1 (A:) Legume lectin {Soybean (Glycine max) [TaxId: 3847]} Length = 251

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Legume lectin
species: Soybean (Glycine max) [TaxId: 3847]

 Score =  199 bits (508), Expect = 7e-60
 Identities = 76/285 (26%), Positives = 107/285 (37%), Gaps = 46/285 (16%)

Query: 24  SAVDFVFNGF--NSSNLSLYGTATVESR-ILTLTNST------TFTIGRALYPSKIPTKR 74
             V F +N F     N+ L G A V S   L L            ++GRALY + I    
Sbjct: 2   ETVSFSWNKFVPKQPNMILQGDAIVTSSGKLQLNKVDENGTPKPSSLGRALYSTPIHIWD 61

Query: 75  PNSSYVYPFSTSFIFAMAPYKGVLAGHGLVFLFVPFHGIKGATEAQHLGLFNRTNDGNSS 134
             +  V  F+ SF F            GL F   P           H G     N+  S 
Sbjct: 62  KETGSVASFAASFNFTFYAPDTKRLADGLAFFLAPI----DTKPQTHAGYLGLFNENESG 117

Query: 135 NHVFGVEFDVFKNQEFNDIDENHVGIDVNSLTSVSAHAAGYWPDNQTDSSGSNSNSGTGD 194
           + V  VEFD F+N    D    H+GI+VNS+ S+                          
Sbjct: 118 DQVVAVEFDTFRN--SWDPPNPHIGINVNSIRSIKTT----------------------- 152

Query: 195 DEKSFKELKLNNGKNYQVWIDYADSFINITMVEAGMKRPKRPLLSVPLNLSGVLEDEMYV 254
                    L N K  +V I Y  S   +        +    +LS  ++L   L + + +
Sbjct: 153 ------SWDLANNKVAKVLITYDASTSLLVASLVYPSQRTSNILSDVVDLKTSLPEWVRI 206

Query: 255 GFTAATGQLV--ESHKILAWSFSNTKFSLSEELITSGLPSFVLPK 297
           GF+AATG  +  ESH +L+WSF++     S  +    L SFVL +
Sbjct: 207 GFSAATGLDIPGESHDVLSWSFASNLPHASSNIDPLDLTSFVLHE 251

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} Length = 287

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score =  200 bits (509), Expect = 2e-59
 Identities = 69/300 (23%), Positives = 135/300 (45%), Gaps = 20/300 (6%)

Query: 351 PHRITYQEIEAATKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLA 410
           P    Y + E      + ++ +G G  G+VY+GV +     +AVK +  E+      FL 
Sbjct: 4   PSSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL-KEDTMEVEEFLK 62

Query: 411 EISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRV 470
           E + +  +KH +LV L G C   +    ++ ++M  G+L  ++ +C     +S    + +
Sbjct: 63  EAAVMKEIKHPNLVQLLGVC-TREPPFYIITEFMTYGNLLDYLREC-NRQEVSAVVLLYM 120

Query: 471 LKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRVV 530
              +++ + YL +   K  +HRD+ + N L+ +    ++ DFGL+R+       +     
Sbjct: 121 ATQISSAMEYLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAK 177

Query: 531 GTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLL 590
             + + APE  +  + S ++DV+ FG+L+ E+ +       G       V+EL+ +   +
Sbjct: 178 FPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDL--SQVYELLEKDYRM 235

Query: 591 DALDARLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLEGKI-EAGIENETE 649
           +             E   E+V  L   C   +P  RP+  ++ +  E    E+ I +E E
Sbjct: 236 E-----------RPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSISDEVE 284

>d1g7ya_ b.29.1.1 (A:) Legume lectin {Horse gram (Dolichos biflorus), different isoforms [TaxId: 3840]} Length = 253

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Legume lectin
species: Horse gram (Dolichos biflorus), different isoforms [TaxId: 3840]

 Score =  197 bits (501), Expect = 8e-59
 Identities = 73/281 (25%), Positives = 117/281 (41%), Gaps = 42/281 (14%)

Query: 26  VDFVFNGFNSSNLSLYGTATVESRILTLTNS------TTFTIGRALYPSKIPTKRPNSSY 79
             F F  FNSS+  L G ATV S  L LT        T  ++GRA Y S I     ++  
Sbjct: 4   QSFSFKNFNSSSFILQGDATVSSSKLRLTKVKGNGLPTLSSLGRAFYSSPIQIYDKSTGA 63

Query: 80  VYPFSTSFIFAMAPYKGVLAGHGLVFLFVPFHGIKGATEAQHLGLFNRTNDGNSSNHVFG 139
           V  ++TSF   +       +  G+ F  VP      +  +  LG+F+     NS      
Sbjct: 64  VASWATSFTANIFAPNKSSSADGIAFALVPVGSEPKSN-SGFLGVFDSDVYDNS-AQTVA 121

Query: 140 VEFDVFKNQEFNDIDENHVGIDVNSLTSVSAHAAGYWPDNQTDSSGSNSNSGTGDDEKSF 199
           VEFD F N ++ D    H+GIDVNS+ S+   + G                         
Sbjct: 122 VEFDTFSNTDW-DPTSRHIGIDVNSIKSIRTASWG------------------------- 155

Query: 200 KELKLNNGKNYQVWIDYADSFINITMVEAGMKRPKRPLLSVPLNLSGVLEDEMYVGFTAA 259
               L NG+N ++ I Y  +   +        R    ++S  ++++  L + + +GF+A 
Sbjct: 156 ----LANGQNAEILITYNAATSLLVASLVHPSRRTSYIVSERVDITNELPEYVSIGFSAT 211

Query: 260 TG---QLVESHKILAWSFSNTKFSLSEELITSGLPSFVLPK 297
           TG      E+H +L+WSF+ +K           + S+++  
Sbjct: 212 TGLSEGYTETHDVLSWSFA-SKLPDDSTTEPLDIASYLVRN 251

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score =  198 bits (504), Expect = 9e-59
 Identities = 80/305 (26%), Positives = 144/305 (47%), Gaps = 38/305 (12%)

Query: 355 TYQEIEAATKGFSEE---------NVIGVGGNGKVYKGVLEGGG---AEIAVKRI-SHEN 401
           T+++   A + F++E          VIG G  G+V  G L+  G     +A+K + S   
Sbjct: 8   TFEDPNEAVREFAKEIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYT 67

Query: 402 DGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMM 461
           +   R FL+E S +G+  H +++ L G    +   +M++ ++MENGSLD ++ Q DG   
Sbjct: 68  EKQRRDFLSEASIMGQFDHPNVIHLEGVV-TKSTPVMIITEFMENGSLDSFLRQNDGQF- 125

Query: 462 LSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHG 521
            +  + + +L+ +AAG+ YL +      +HRD+ + N+L++  +  ++ DFGL+R     
Sbjct: 126 -TVIQLVGMLRGIAAGMKYLAD---MNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDD 181

Query: 522 Q----VASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLS-GRRPIEEGKPNL 576
                  S       + + APE     + ++ +DV+ +GI++ EV+S G RP        
Sbjct: 182 TSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERP-------- 233

Query: 577 VEMVWELMVQGKLLDALDARLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVL 636
               +  M    +++A++   R       D    +  L L C   D   RP   Q+V  L
Sbjct: 234 ----YWDMTNQDVINAIEQDYRLP--PPMDCPSALHQLMLDCWQKDRNHRPKFGQIVNTL 287

Query: 637 EGKIE 641
           +  I 
Sbjct: 288 DKMIR 292

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  194 bits (495), Expect = 7e-58
 Identities = 74/278 (26%), Positives = 121/278 (43%), Gaps = 21/278 (7%)

Query: 366 FSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVG 425
            +    IG G  G V+ G       ++A+K I  E       F+ E   + +L H  LV 
Sbjct: 7   LTFVQEIGSGQFGLVHLGYWLNKD-KVAIKTI-REGAMSEEDFIEEAEVMMKLSHPKLVQ 64

Query: 426 LRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGW 485
           L G C  E+  + LV+++ME+G L  ++       + + E  + +  DV  G   +    
Sbjct: 65  LYGVC-LEQAPICLVFEFMEHGCLSDYLRTQR--GLFAAETLLGMCLDVCEG---MAYLE 118

Query: 486 EKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGR 545
           E  V+HRD+ + N L+ +    ++ DFG+ R     Q  S+T     V + +PEVFS  R
Sbjct: 119 EACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSR 178

Query: 546 ASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRAKGGFDE 605
            S+++DV+ FG+L+ EV S  +   E + N    V E +  G  L               
Sbjct: 179 YSSKSDVWSFGVLMWEVFSEGKIPYENRSN--SEVVEDISTGFRLY-----------KPR 225

Query: 606 DEVERVLHLGLLCAYPDPRARPTMRQVVKVLEGKIEAG 643
                V  +   C    P  RP   ++++ L    E+G
Sbjct: 226 LASTHVYQIMNHCWKERPEDRPAFSRLLRQLAEIAESG 263

>d1g8wa_ b.29.1.1 (A:) Phytohemagglutinin-L, PHA-L, also arcelin {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} Length = 233

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Phytohemagglutinin-L, PHA-L, also arcelin
species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]

 Score =  191 bits (485), Expect = 6e-57
 Identities = 73/264 (27%), Positives = 110/264 (41%), Gaps = 44/264 (16%)

Query: 24  SAVDFVFNGFNSSNLSLYGTATVES-RILTLTNST------TFTIGRALYPSKIPTKRPN 76
           + + F F  FN +NL L   A+V S   L LTN          ++GRA Y + I      
Sbjct: 2   NDIYFNFQRFNETNLILQRDASVSSSGQLRLTNLNGNGEPRVGSLGRAFYSAPIQIWDNT 61

Query: 77  SSYVYPFSTSFIFAMAPYKGVLAGHGLVFLFVPFHGIKGATEAQHLGLFNRTNDGNSSNH 136
           +  V  F+TSF F +          GL F  VP     G+      G     +  NS+ H
Sbjct: 62  TGTVASFATSFTFNIQVPNNAGPADGLAFALVPV----GSQPKDKGGFLGLFDGSNSNFH 117

Query: 137 VFGVEFDVFKNQEFNDIDENHVGIDVNSLTSVSAHAAGYWPDNQTDSSGSNSNSGTGDDE 196
              VEFD   N+++ D  E H+GIDVNS+ S+      +                     
Sbjct: 118 TVAVEFDTLYNKDW-DPTERHIGIDVNSIRSIKTTRWDFV-------------------- 156

Query: 197 KSFKELKLNNGKNYQVWIDYADSFINITMVEAGMKRPKRPLLSVPLNLSGVLEDEMYVGF 256
                    NG+N +V I Y  S   +        +    ++S  ++L  VL + + VGF
Sbjct: 157 ---------NGENAEVLITYDSSTNLLVASLVYPSQKTSFIVSDTVDLKSVLPEWVSVGF 207

Query: 257 TAATGQL---VESHKILAWSFSNT 277
           +A TG     VE++ +L+WSF++ 
Sbjct: 208 SATTGINKGNVETNDVLSWSFASK 231

>d1gzca_ b.29.1.1 (A:) Legume lectin {Cockspur coral tree (Erythrina crista-galli) [TaxId: 49817]} Length = 239

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Legume lectin
species: Cockspur coral tree (Erythrina crista-galli) [TaxId: 49817]

 Score =  191 bits (486), Expect = 7e-57
 Identities = 71/268 (26%), Positives = 105/268 (39%), Gaps = 45/268 (16%)

Query: 23  ISAVDFVFNGFNS--SNLSLYGTATVES-RILTLTNST------TFTIGRALYPSKIPTK 73
           +  + F F+ F     NL+L G A +    +L LT           + GR LY   +   
Sbjct: 1   VETISFSFSEFEPGNDNLTLQGAALITQSGVLQLTKINQNGMPAWDSTGRTLYTKPVHMW 60

Query: 74  RPNSSYVYPFSTSFIFAM-APYKGVLAGHGLVFLFVPFHGIKGATEAQHLGLFNRTNDGN 132
              +  V  F T F F++  PY   L   GLVF   P    K A    +LG+FN +   N
Sbjct: 61  DSTTGTVASFETRFSFSIEQPYTRPLPADGLVFFMGP-TKSKPAQGYGYLGVFNNSKQDN 119

Query: 133 SSNHVFGVEFDVFKNQEFNDIDENHVGIDVNSLTSVSAHAAGYWPDNQTDSSGSNSNSGT 192
           S      VEFD F N  ++     H+GIDVNS+ S+        P               
Sbjct: 120 S-YQTLAVEFDTFSN-PWDPPQVPHIGIDVNSIRSIKTQ-----PFQ------------- 159

Query: 193 GDDEKSFKELKLNNGKNYQVWIDYADSFINITMVEAGMKRPKRPLLSVPLNLSGVLEDEM 252
                      L+NG+   V I Y      + +V           ++  +++  VL D +
Sbjct: 160 -----------LDNGQVANVVIKYDAPSKILHVVLVYPSSGAIYTIAEIVDVKQVLPDWV 208

Query: 253 YVGFTAATG---QLVESHKILAWSFSNT 277
            VG + ATG      E+H + +WSF  +
Sbjct: 209 DVGLSGATGAQRDAAETHDVYSWSFQAS 236

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  192 bits (488), Expect = 1e-56
 Identities = 66/284 (23%), Positives = 123/284 (43%), Gaps = 21/284 (7%)

Query: 354 ITYQEIEAATKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAEIS 413
           +     E   +    E  +G G  G+V+ G   G    +A+K +         AFL E  
Sbjct: 7   LAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTT-RVAIKTL-KPGTMSPEAFLQEAQ 64

Query: 414 SLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKD 473
            + +L+H+ LV L       +  + +V +YM  GSL  ++    G  +    + + +   
Sbjct: 65  VMKKLRHEKLVQLYAVV--SEEPIYIVTEYMSKGSLLDFLKGETGKYL-RLPQLVDMAAQ 121

Query: 474 VAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRVVGTV 533
           +A+G+ Y+        +HRD++++N+L+ + +  ++ DFGLAR+    +  +       +
Sbjct: 122 IASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPI 178

Query: 534 GYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDAL 593
            + APE    GR + ++DV+ FGIL+ E+ +  R    G  N    V + + +G  +   
Sbjct: 179 KWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN--REVLDQVERGYRMP-- 234

Query: 594 DARLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLE 637
                       +  E +  L   C   +P  RPT   +   LE
Sbjct: 235 ---------CPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLE 269

>d1qnwa_ b.29.1.1 (A:) Legume lectin {Furze (Ulex europaeus), UEA-II [TaxId: 3902]} Length = 237

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Legume lectin
species: Furze (Ulex europaeus), UEA-II [TaxId: 3902]

 Score =  190 bits (484), Expect = 1e-56
 Identities = 66/263 (25%), Positives = 111/263 (42%), Gaps = 40/263 (15%)

Query: 25  AVDFVFNGF--NSSNLSLYGTATVES-RILTLTNS---TTFTIGRALYPSKIPTKRPNSS 78
            + F F+ F  N  N+   G A+V +  +L +T     TT +IGRALY + I      + 
Sbjct: 3   DLSFNFDKFVPNQKNIIFQGDASVSTTGVLQVTKVSKPTTTSIGRALYAAPIQIWDSITG 62

Query: 79  YVYPFSTSFIFAMAPYKGVLAGHGLVFLFVPFHGIKGATEAQHLGLFNRTNDGNSSNHVF 138
            V  F+TSF F +   K      GL F   P +    +  +  +     ++D  SSN + 
Sbjct: 63  KVASFATSFSFVVKADKSD-GVDGLAFFLAPANSQIPSGSSAGMFGLFSSSDSKSSNQII 121

Query: 139 GVEFDVFKNQEFN--DIDENHVGIDVNSLTSVSAHAAGYWPDNQTDSSGSNSNSGTGDDE 196
            VEFD +  + +N  D D  H+GIDVNS+ S+      +                     
Sbjct: 122 AVEFDTYFGKAYNPWDPDFKHIGIDVNSIKSIKTVKWDW--------------------- 160

Query: 197 KSFKELKLNNGKNYQVWIDYADSFINITMVEAGMKRPKRPLLSVPLNLSGVLEDEMYVGF 256
                    NG+   V I Y     ++T+  +        +++  ++L  +L + + VGF
Sbjct: 161 --------RNGEVADVVITYRAPTKSLTVCLSYPSDGTSNIITASVDLKAILPEWVSVGF 212

Query: 257 TAATGQLV--ESHKILAWSFSNT 277
           +   G     E+H +L+W F++ 
Sbjct: 213 SGGVGNAAEFETHDVLSWYFTSN 235

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 283

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  190 bits (484), Expect = 5e-56
 Identities = 73/284 (25%), Positives = 136/284 (47%), Gaps = 26/284 (9%)

Query: 366 FSEENVIGVGGNGKVYKGVLEGGGAE----IAVKRISHENDGGTRA-FLAEISSLGRLKH 420
            + + VIG G  G+VYKG+L+    +    +A+K +        R  FL E   +G+  H
Sbjct: 9   VTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSH 68

Query: 421 KSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLY 480
            +++ L G    +   +M++ +YMENG+LDK++ + DG    S  + + +L+ +AAG+ Y
Sbjct: 69  HNIIRLEGVI-SKYKPMMIITEYMENGALDKFLREKDG--EFSVLQLVGMLRGIAAGMKY 125

Query: 481 LHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRV--VGTVGYLAP 538
           L        +HRD+ + N+L++  +  ++ DFGL+R+      A+ T       + + AP
Sbjct: 126 LAN---MNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAP 182

Query: 539 EVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDARLR 598
           E  S  + ++ +DV+ FGI++ EV++          N            +++ A++   R
Sbjct: 183 EAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSN-----------HEVMKAINDGFR 231

Query: 599 AKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLEGKIEA 642
                  D    +  L + C   +   RP    +V +L+  I A
Sbjct: 232 LP--TPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKLIRA 273

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  189 bits (482), Expect = 5e-56
 Identities = 78/272 (28%), Positives = 121/272 (44%), Gaps = 25/272 (9%)

Query: 366 FSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVG 425
                 IG G  G V  G   G   ++AVK I   ND   +AFLAE S + +L+H +LV 
Sbjct: 9   LKLLQTIGKGEFGDVMLGDYRGN--KVAVKCIK--NDATAQAFLAEASVMTQLRHSNLVQ 64

Query: 426 LRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGW 485
           L G    EKG L +V +YM  GSL  ++    G  +L  +  ++   DV   + YL    
Sbjct: 65  LLGVIVEEKGGLYIVTEYMAKGSLVDYLRS-RGRSVLGGDCLLKFSLDVCEAMEYLE--- 120

Query: 486 EKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGR 545
               +HRD+ + NVL+ ++   ++ DFGL +        +       V + APE     +
Sbjct: 121 GNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASS----TQDTGKLPVKWTAPEALREKK 176

Query: 546 ASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRAKGGFDE 605
            ST++DV+ FGIL+ E+ S  R      P   + V   + +G  +D             +
Sbjct: 177 FSTKSDVWSFGILLWEIYSFGRVPYPRIPL--KDVVPRVEKGYKMD-----------APD 223

Query: 606 DEVERVLHLGLLCAYPDPRARPTMRQVVKVLE 637
                V  +   C + D   RP+  Q+ + LE
Sbjct: 224 GCPPAVYEVMKNCWHLDAAMRPSFLQLREQLE 255

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  190 bits (484), Expect = 9e-56
 Identities = 75/292 (25%), Positives = 129/292 (44%), Gaps = 25/292 (8%)

Query: 369 ENVIGVGGNGKVYKGVL---EGGGAEIAVKRISHEND-GGTRAFLAEISSLGRLKHKSLV 424
             VIG G  G VY G L   +G     AVK ++   D G    FL E   +    H +++
Sbjct: 32  NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 91

Query: 425 GLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEG 484
            L G C R +GS ++V  YM++G L    F  + +   + ++ I     VA G   +   
Sbjct: 92  SLLGICLRSEGSPLVVLPYMKHGDLRN--FIRNETHNPTVKDLIGFGLQVAKG---MKFL 146

Query: 485 WEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVAS---TTRVVGTVGYLAPEVF 541
             KK +HRD+ + N +LD++   ++ DFGLAR     +  S    T     V ++A E  
Sbjct: 147 ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESL 206

Query: 542 SSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRAKG 601
            + + +T++DV+ FG+L+ E+++   P      N  ++   L+   +LL           
Sbjct: 207 QTQKFTTKSDVWSFGVLLWELMTRGAPPYPDV-NTFDITVYLLQGRRLLQ---------- 255

Query: 602 GFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLEGKIEAGIENETEDMDA 653
              E   + +  + L C +P    RP+  ++V  +       I      ++A
Sbjct: 256 --PEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFIGEHYVHVNA 305

>d1ukga_ b.29.1.1 (A:) Legume lectin {Bloodwood tree (Pterocarpus angolensis) [TaxId: 182271]} Length = 241

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Legume lectin
species: Bloodwood tree (Pterocarpus angolensis) [TaxId: 182271]

 Score =  188 bits (478), Expect = 1e-55
 Identities = 71/264 (26%), Positives = 113/264 (42%), Gaps = 41/264 (15%)

Query: 25  AVDFVFNGFNS--SNLSLYGTATVESRILTLT------NSTTFTIGRALYPSKIPTKRPN 76
           ++ F F  F S   NL   G A +++  + LT      N    T+GR L+ +++     +
Sbjct: 3   SLSFGFPTFPSDQKNLIFQGDAQIKNNAVQLTKTDSNGNPVASTVGRILFSAQVHLWEKS 62

Query: 77  SSYVYPFSTSFIFAMAPYKGVLAGHGLVFLFVPFHGIKGATEAQHLGLFNR-TNDGNSSN 135
           SS V  F + F F++       A     F+  P   I   +    LGLF   T    S+N
Sbjct: 63  SSRVANFQSQFSFSLKSPLSNGADGIAFFIAPPDTTIPSGSGGGLLGLFAPGTAQNTSAN 122

Query: 136 HVFGVEFDVFKNQEFNDIDE--NHVGIDVNSLTSVSAHAAGYWPDNQTDSSGSNSNSGTG 193
            V  VEFD F  Q+ N  D    H+GIDVNS+ SV                         
Sbjct: 123 QVIAVEFDTFYAQDSNTWDPNYPHIGIDVNSIRSVKTVK--------------------- 161

Query: 194 DDEKSFKELKLNNGKNYQVWIDYADSFINITMVEAGMKRPKRPLLSVPLNLSGVLEDEMY 253
                       +G++  V + +  S  N+  V A      R  +S  +++  VL + + 
Sbjct: 162 --------WDRRDGQSLNVLVTFNPSTRNLD-VVATYSDGTRYEVSYEVDVRSVLPEWVR 212

Query: 254 VGFTAATGQLVESHKILAWSFSNT 277
           VGF+AA+G+  ++H + +WSF++T
Sbjct: 213 VGFSAASGEQYQTHTLESWSFTST 236

>d1leda_ b.29.1.1 (A:) Legume lectin {West-central african legume (Griffonia simplicifolia) [TaxId: 3850]} Length = 243

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Legume lectin
species: West-central african legume (Griffonia simplicifolia) [TaxId: 3850]

 Score =  188 bits (478), Expect = 1e-55
 Identities = 68/267 (25%), Positives = 103/267 (38%), Gaps = 44/267 (16%)

Query: 24  SAVDFVFNGF------NSSNLSLYGTATVESRILTLT------NSTTFTIGRALYPSKIP 71
           + V+F +  F      N + ++  G AT     L LT      N    + G+A Y   + 
Sbjct: 2   NTVNFTYPDFWSYSLKNGTEITFLGDATRIPGALQLTKTDANGNPVRSSAGQASYSEPVF 61

Query: 72  TKRPNSSYVYPFSTSFIFAMAPYKGVLAGHGLVFLFVPFHGIKGATEAQHLGLFNRTNDG 131
               ++     F TSF F +  Y G     GL F   P            LGLF      
Sbjct: 62  -LWDSTGKAASFYTSFTFLLKNY-GAPTADGLAFFLAPV-DSSVKDYGGFLGLFRHETAA 118

Query: 132 N-SSNHVFGVEFDVFKNQEFNDIDENHVGIDVNSLTSVSAHAAGYWPDNQTDSSGSNSNS 190
           + S N V  VEFD + N+++ND    H+GIDVNS+ SV+                     
Sbjct: 119 DPSKNQVVAVEFDTWINKDWNDPPYPHIGIDVNSIVSVAT-------------------- 158

Query: 191 GTGDDEKSFKELKLNNGKNYQVWIDYADSFINITMVEAGMKRPKRPLLSVPLNLSGVLED 250
                   ++             I Y D+   I  V    +  +  +LS  ++L+ VL  
Sbjct: 159 ------TRWENDDAYGSSIATAHITY-DARSKILTVLLSYEHGRDYILSHVVDLAKVLPQ 211

Query: 251 EMYVGFTAATGQLVESHKILAWSFSNT 277
           ++ +GF+A  G   E   IL+W F +T
Sbjct: 212 KVRIGFSAGVG-YDEVTYILSWHFFST 237

>d2d3sa1 b.29.1.1 (A:1-237) Legume lectin {Winged bean (Psophocarpus tetragonolobus), basic agglutinin [TaxId: 3891]} Length = 237

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Legume lectin
species: Winged bean (Psophocarpus tetragonolobus), basic agglutinin [TaxId: 3891]

 Score =  187 bits (476), Expect = 1e-55
 Identities = 73/268 (27%), Positives = 101/268 (37%), Gaps = 52/268 (19%)

Query: 26  VDFVFNGF--NSSNLSLYGTATVES-RILTLTN-----STTFTIGRALYPSKIPTKRPNS 77
           + F FN F  N   L L   A + S  +L LT       T  + GRALY   +      +
Sbjct: 3   ISFNFNQFHQNEEQLKLQRDARISSNSVLELTKVVNGVPTWNSTGRALYAKPVQVWDSTT 62

Query: 78  SYVYPFSTSFIFAM-APYKGVLAGHGLVFLFVPFHGIKGATEAQHLGLFNRTNDGNSSNH 136
             V  F T F F++  P+       GLVF   P +   G       G +    +  S   
Sbjct: 63  GNVASFETRFSFSIRQPFPRPHPADGLVFFIAPPNTQTGE-----GGGYFGIYNPLSPYP 117

Query: 137 VFGVEFDVFKNQEFNDIDENHVGIDVNSLTSVSAHAAGYWPDNQTDSSGSNSNSGTGDDE 196
              VEFD F+N    D    H+GIDVNS+ S                             
Sbjct: 118 FVAVEFDTFRNTW--DPQIPHIGIDVNSVISTKTV------------------------- 150

Query: 197 KSFKELKLNNGKNYQVWIDYADSFINITMVEAGMKRPKRPLLSVPLNLSGVLEDEMYVGF 256
                  L+NG    V I Y  S   + +V           ++  ++L  VL + + VGF
Sbjct: 151 ----PFTLDNGGIANVVIKYDASTKILHVVLVFPSLGTIYTIADIVDLKQVLPESVNVGF 206

Query: 257 TAATGQ-------LVESHKILAWSFSNT 277
           +AATG          E+H IL+WSFS +
Sbjct: 207 SAATGDPSGKQRNATETHDILSWSFSAS 234

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  190 bits (483), Expect = 2e-55
 Identities = 64/306 (20%), Positives = 120/306 (39%), Gaps = 39/306 (12%)

Query: 359 IEAATKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRA-FLAEISSLGR 417
           +E     F + + +G G  G V+K   +  G  +A K I  E     R   + E+  L  
Sbjct: 1   MELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHE 60

Query: 418 LKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAG 477
                +VG  G      G + +  ++M+ GSLD+ + +      +  +   +V   V  G
Sbjct: 61  CNSPYIVGFYGAF-YSDGEISICMEHMDGGSLDQVLKKAGR---IPEQILGKVSIAVIKG 116

Query: 478 VLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLA 537
           + YL E  + K++HRD+K SN+L++     +L DFG++              VGT  Y++
Sbjct: 117 LTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM---ANSFVGTRSYMS 171

Query: 538 PEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDARL 597
           PE       S Q+D++  G+ ++E+  GR PI       +E+++   V+G   +      
Sbjct: 172 PERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPR 231

Query: 598 RAKGGFDEDEVERVLHLGLL-----------------------------CAYPDPRARPT 628
                     ++    + +                              C   +P  R  
Sbjct: 232 TPGRPLSSYGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERAD 291

Query: 629 MRQVVK 634
           ++Q++ 
Sbjct: 292 LKQLMV 297

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} Length = 258

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  188 bits (478), Expect = 2e-55
 Identities = 65/272 (23%), Positives = 117/272 (43%), Gaps = 21/272 (7%)

Query: 366 FSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVG 425
            +    +G G  G V  G   G   ++A+K I  E       F+ E   +  L H+ LV 
Sbjct: 6   LTFLKELGTGQFGVVKYGKWRGQY-DVAIKMI-KEGSMSEDEFIEEAKVMMNLSHEKLVQ 63

Query: 426 LRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGW 485
           L G C  ++  + ++ +YM NG L  ++ +         ++ + + KDV   + YL    
Sbjct: 64  LYGVC-TKQRPIFIITEYMANGCLLNYLREMRHR--FQTQQLLEMCKDVCEAMEYLES-- 118

Query: 486 EKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGR 545
            K+ LHRD+ + N L++ +   ++ DFGL+R     +  S+      V +  PEV    +
Sbjct: 119 -KQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSK 177

Query: 546 ASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRAKGGFDE 605
            S+++D++ FG+L+ E+ S  +   E   N      E + QG  L               
Sbjct: 178 FSSKSDIWAFGVLMWEIYSLGKMPYERFTN--SETAEHIAQGLRLY-----------RPH 224

Query: 606 DEVERVLHLGLLCAYPDPRARPTMRQVVKVLE 637
              E+V  +   C +     RPT + ++  + 
Sbjct: 225 LASEKVYTIMYSCWHEKADERPTFKILLSNIL 256

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  188 bits (479), Expect = 3e-55
 Identities = 62/275 (22%), Positives = 111/275 (40%), Gaps = 25/275 (9%)

Query: 368 EENVIGVGGNGKVYKGVL--EGGGAEIAVKRISHEND-GGTRAFLAEISSLGRLKHKSLV 424
            +  +G G  G V +GV        ++A+K +    +   T   + E   + +L +  +V
Sbjct: 13  ADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIV 72

Query: 425 GLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEG 484
            L G C  +  +LMLV +    G L K++        +       +L  V+ G+ YL E 
Sbjct: 73  RLIGVC--QAEALMLVMEMAGGGPLHKFLVGKREE--IPVSNVAELLHQVSMGMKYLEE- 127

Query: 485 WEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTR--VVGTVGYLAPEVFS 542
             K  +HRD+ + NVLL      ++ DFGL++  G      T R      + + APE  +
Sbjct: 128 --KNFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECIN 185

Query: 543 SGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRAKGG 602
             + S+++DV+ +G+ + E LS  +   +        V   + QGK ++           
Sbjct: 186 FRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKG--PEVMAFIEQGKRME----------- 232

Query: 603 FDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLE 637
              +    +  L   C       RP    V + + 
Sbjct: 233 CPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMR 267

>d1f9ka_ b.29.1.1 (A:) Legume lectin {Winged bean (Psophocarpus tetragonolobus), acidic lectin [TaxId: 3891]} Length = 234

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Legume lectin
species: Winged bean (Psophocarpus tetragonolobus), acidic lectin [TaxId: 3891]

 Score =  186 bits (473), Expect = 4e-55
 Identities = 73/272 (26%), Positives = 104/272 (38%), Gaps = 54/272 (19%)

Query: 21  ESISAVDFVFNGF--NSSNLSLYGTATVESR-ILTLTNST------TFTIGRALYPSKIP 71
           E+ S   F F+ F  NS  L+L   A+++S  +L LT  T        + GRALY   I 
Sbjct: 1   ETQS---FNFDHFEENSKELNLQRQASIKSNGVLELTKLTKNGVPVWKSTGRALYAEPIK 57

Query: 72  TKRPNSSYVYPFSTSFIFAM-APYKGVLAGHGLVFLFVPFHGIKGATEAQHLGLFNRTND 130
                +  V  F T F F +  PY       GL F  VP       +     G       
Sbjct: 58  IWDSTTGNVASFETRFSFNITQPYAYPEPADGLTFFMVPP-----NSPQGEDGGNLGVFK 112

Query: 131 GNSSNHVFGVEFDVFKNQEFNDIDENHVGIDVNSLTSVSAHAAGYWPDNQTDSSGSNSNS 190
               ++ F VEFD F+N    D    H+GIDVNS+ S                       
Sbjct: 113 PPEGDNAFAVEFDTFQNTW--DPQVPHIGIDVNSIVSSK--------------------- 149

Query: 191 GTGDDEKSFKELKLNNGKNYQVWIDYADSFINITMVEAGMKRPKRPLLSVPLNLSGVL-- 248
                       +L NG    V I Y      + +V A         LS  ++L      
Sbjct: 150 --------TLHFQLENGGVANVVIKYDSPTKILNVVLAFHSVGTVYTLSNIVDLKQEFPN 201

Query: 249 EDEMYVGFTAATG---QLVESHKILAWSFSNT 277
            + + VG +A TG     VE+H+I++WSF+++
Sbjct: 202 SEWVNVGLSATTGYQKNAVETHEIISWSFTSS 233

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  187 bits (476), Expect = 5e-55
 Identities = 69/276 (25%), Positives = 117/276 (42%), Gaps = 27/276 (9%)

Query: 368 EENVIGVGGNGKVYKGVLEGG--GAEIAVKRISHE--NDGGTRAFLAEISSLGRLKHKSL 423
           E+  +G G  G V KG  +       +AVK + +E  +       LAE + + +L +  +
Sbjct: 11  EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 70

Query: 424 VGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHE 483
           V + G C  E  S MLV +  E G L+K++ Q      +  +  I ++  V+ G+ YL E
Sbjct: 71  VRMIGIC--EAESWMLVMEMAELGPLNKYLQQNRH---VKDKNIIELVHQVSMGMKYLEE 125

Query: 484 GWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARM--HGHGQVASTTRVVGTVGYLAPEVF 541
                 +HRD+ + NVLL  +   ++ DFGL++          + T     V + APE  
Sbjct: 126 ---SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECI 182

Query: 542 SSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRAKG 601
           +  + S+++DV+ FG+L+ E  S  +    G       V  ++ +G+ +           
Sbjct: 183 NYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKG--SEVTAMLEKGERMG---------- 230

Query: 602 GFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLE 637
                    +  L  LC   D   RP    V   L 
Sbjct: 231 -CPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLR 265

>d1v6ia_ b.29.1.1 (A:) Legume lectin {Peanut (Arachis hypogaea) [TaxId: 3818]} Length = 232

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Legume lectin
species: Peanut (Arachis hypogaea) [TaxId: 3818]

 Score =  184 bits (469), Expect = 2e-54
 Identities = 68/259 (26%), Positives = 100/259 (38%), Gaps = 37/259 (14%)

Query: 24  SAVDFVFNGFNSSN--LSLYGTATVES-RILTLTN-STTFTIGRALYPSKIPTKRPNSSY 79
             V F FN F+  N  ++  G  TV S   + LTN +   ++GR LY   +      +  
Sbjct: 2   ETVSFNFNSFSEGNPAINFQGDVTVLSNGNIQLTNLNKVNSVGRVLYAMPVRIWSSATGN 61

Query: 80  VYPFSTSFIFAMAPYKGVLAGHGLVFLFVPFHGIKGATEAQHLGLFNRTNDGNSSNHVFG 139
           V  F TSF F M   K      G++F   P      A      G     +D   + H  G
Sbjct: 62  VASFLTSFSFEMKDIKDYDPADGIIFFIAPEDTQIPAG--SIGGGTLGVSDTKGAGHFVG 119

Query: 140 VEFDVFKNQEFNDIDENHVGIDVNSLTSVSAHAAGYWPDNQTDSSGSNSNSGTGDDEKSF 199
           VEFD + N E+ND   +HVGIDVNS+ SV                               
Sbjct: 120 VEFDTYSNSEYNDPPTDHVGIDVNSVDSVKTV---------------------------- 151

Query: 200 KELKLNNGKNYQVWIDYADSFINITMVEAGMKRPKRPLLSVPLNLSGVLEDEMYVGFTAA 259
                 +G   +V + Y DS      V           ++  ++L   L + +  GF+A+
Sbjct: 152 -PWNSVSGAVVKVTVIY-DSSTKTLSVAVTNDNGDITTIAQVVDLKAKLPERVKFGFSAS 209

Query: 260 TGQL-VESHKILAWSFSNT 277
                 + H I +WSF++T
Sbjct: 210 GSLGGRQIHLIRSWSFTST 228

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  186 bits (473), Expect = 3e-54
 Identities = 70/314 (22%), Positives = 130/314 (41%), Gaps = 45/314 (14%)

Query: 356 YQEIEAATKGFSEENVIGVGGNGKVYKGVLEGG-----GAEIAVKRISHENDGGTRA-FL 409
              +E           IG G  G+V++    G         +AVK +  E     +A F 
Sbjct: 5   LLSLEYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQ 64

Query: 410 AEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCD------------ 457
            E + +    + ++V L G C      + L+++YM  G L++++                
Sbjct: 65  REAALMAEFDNPNIVKLLGVC-AVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDL 123

Query: 458 ---------GSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGR 508
                    G   LSC E++ + + VAAG+ YL E   +K +HRD+ + N L+ + M  +
Sbjct: 124 STRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSE---RKFVHRDLATRNCLVGENMVVK 180

Query: 509 LGDFGLAR-MHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRR 567
           + DFGL+R ++      +       + ++ PE     R +T++DV+ +G+++ E+ S   
Sbjct: 181 IADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGL 240

Query: 568 PIEEGKPNLVEMVWELMVQGKLLDALDARLRAKGGFDEDEVERVLHLGLLCAYPDPRARP 627
               G  +  E V   +  G +L              E+    + +L  LC    P  RP
Sbjct: 241 QPYYGMAH--EEVIYYVRDGNILA-----------CPENCPLELYNLMRLCWSKLPADRP 287

Query: 628 TMRQVVKVLEGKIE 641
           +   + ++L+   E
Sbjct: 288 SFCSIHRILQRMCE 301

>d1avba_ b.29.1.1 (A:) Phytohemagglutinin-L, PHA-L, also arcelin {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} Length = 226

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Phytohemagglutinin-L, PHA-L, also arcelin
species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]

 Score =  183 bits (466), Expect = 3e-54
 Identities = 68/261 (26%), Positives = 107/261 (40%), Gaps = 45/261 (17%)

Query: 24  SAVDFVFNGFNSSNLSLYGTATVESR-ILTLTNST---TFTIGRALYPSKIPTKRPNSSY 79
           +   F    FN +NL L G ATV S   L LTN       ++GRA Y + I         
Sbjct: 2   NDASFNVETFNKTNLILQGDATVSSEGHLLLTNVKGNEEDSMGRAFYSAPIQINDRTIDN 61

Query: 80  VYPFSTSFIFAMAPYKGVLAGHGLVFLFVPFHGIKGATEAQHLGLFNRTNDGNSSNHVFG 139
           +  FST+F F +       + +GL F  VP  G +   + ++LGLFN TN          
Sbjct: 62  LASFSTNFTFRINAKNIENSAYGLAFALVP-VGSRPKLKGRYLGLFNTTN---------- 110

Query: 140 VEFDVFKNQEFNDIDENHVGIDVNSLTSVSAHAAGYWPDNQTDSSGSNSNSGTGDDEKSF 199
            + D        D   N + IDVNS+  ++  +  +                        
Sbjct: 111 YDRDAHTVAVVFDTVSNRIEIDVNSIRPIATESCNFG----------------------- 147

Query: 200 KELKLNNGKNYQVWIDYADSFINITMVEAGMKRPKRPLLSVPLNLSGVLEDEMYVGFTAA 259
                NNG+  +V I Y     ++ +        ++  +S  + L   +ED + VGF+A 
Sbjct: 148 ----HNNGEKAEVRITYDSPKNDLRVSLLYPSSEEKCHVSATVPLEKEVEDWVSVGFSAT 203

Query: 260 TG---QLVESHKILAWSFSNT 277
           +G   +  E+H +L+WSFS+ 
Sbjct: 204 SGSKKETTETHNVLSWSFSSN 224

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} Length = 303

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  185 bits (471), Expect = 6e-54
 Identities = 68/294 (23%), Positives = 120/294 (40%), Gaps = 33/294 (11%)

Query: 369 ENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRG 428
           +  IG G  G+V++G   G   E+AVK  S   +       AEI     L+H++++G   
Sbjct: 8   QESIGKGRFGEVWRGKWRG--EEVAVKIFSSREERSWF-REAEIYQTVMLRHENILGFIA 64

Query: 429 WCKREKGS---LMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHE-- 483
              ++ G+   L LV DY E+GSL  ++ +      ++ E  I++    A+G+ +LH   
Sbjct: 65  ADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYT----VTVEGMIKLALSTASGLAHLHMEI 120

Query: 484 ---GWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQ---VASTTRVVGTVGYLA 537
                +  + HRD+KS N+L+ K     + D GLA  H         +    VGT  Y+A
Sbjct: 121 VGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMA 180

Query: 538 PEVFSS------GRASTQTDVFGFGILILEVLSGRRPIEEGKP--------NLVEMVWEL 583
           PEV           +  + D++  G++  E+          +            +   E 
Sbjct: 181 PEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEE 240

Query: 584 MVQGKLLDALDARLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLE 637
           M +      L   +  +     + +  +  +   C Y +  AR T  ++ K L 
Sbjct: 241 MRKVVCEQKLRPNIPNR-WQSCEALRVMAKIMRECWYANGAARLTALRIKKTLS 293

>d1fx5a_ b.29.1.1 (A:) Legume lectin {Furze (Ulex europaeus), UEA-I [TaxId: 3902]} Length = 240

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Legume lectin
species: Furze (Ulex europaeus), UEA-I [TaxId: 3902]

 Score =  183 bits (465), Expect = 6e-54
 Identities = 67/267 (25%), Positives = 98/267 (36%), Gaps = 42/267 (15%)

Query: 21  ESISAVDFVFNGF--NSSNLSLYGTATVES-RILTLT----NSTTFTIGRALYPSKIPTK 73
           + +S   F F  F  N  +LS  G A+V    +L L     N    T G A Y + I   
Sbjct: 2   DDLS---FKFKNFSQNGKDLSFQGNASVIETGVLQLNKVGNNLPDETGGIARYIAPIHIW 58

Query: 74  RPNSSYVYPFSTSFIFAM-APYKGVLAGHGLVFLFVPFHGIKGATEAQHLGLFNRTNDGN 132
             N+  +  F TSF F M        A  GL F   P           + GLFN T   +
Sbjct: 59  NCNTGELASFITSFSFFMETSANPKAATDGLTFFLAPP-DSPLRRAGGYFGLFNDTK-CD 116

Query: 133 SSNHVFGVEFDVFKN-QEFNDIDENHVGIDVNSLTSVSAHAAGYWPDNQTDSSGSNSNSG 191
           SS     VEFD   +   F D    H+GIDVN + S++A                     
Sbjct: 117 SSYQTVAVEFDTIGSPVNFWDPGFPHIGIDVNCVKSINAERWNK---------------- 160

Query: 192 TGDDEKSFKELKLNNGKNYQVWIDYADSFINITMVEAGMKRPKRPLLSVPLNLSGVLEDE 251
                      +        V I Y  S   +T             ++  ++L  +L + 
Sbjct: 161 -----------RYGLNNVANVEIIYEASSKTLTASLTYPSDQTSISVTSIVDLKEILPEW 209

Query: 252 MYVGFTAATGQ-LVESHKILAWSFSNT 277
           + VGF+ +T      +H++L W F++T
Sbjct: 210 VSVGFSGSTYIGRQATHEVLNWYFTST 236

>d1dbna_ b.29.1.1 (A:) Legume lectin {Maackia amurensis, leukoagglutinin [TaxId: 37501]} Length = 239

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Legume lectin
species: Maackia amurensis, leukoagglutinin [TaxId: 37501]

 Score =  183 bits (464), Expect = 8e-54
 Identities = 64/266 (24%), Positives = 103/266 (38%), Gaps = 41/266 (15%)

Query: 24  SAVDFVFNGF--NSSNLSLYGTATVES-RILTLTN-----STTFTIGRALYPSKIPTKRP 75
             + F  N F  N ++L   G A+V S  +L LT         +++GRALY + +     
Sbjct: 2   DELSFTINNFVPNEADLLFQGEASVSSTGVLQLTKVENGQPQKYSVGRALYAAPVRIWGN 61

Query: 76  NSSYVYPFSTSFIFAMAPYKGVLAGHGLVFLFVPFHGIKGATEAQHLGLFNRTNDGNSSN 135
            +  V  FSTSF F +      +   GL F   P      +            ++ +SSN
Sbjct: 62  TTGSVASFSTSFTFVVKAPNPDITSDGLAFYLAPPDSQIPSGSVSKYLGLFNNSNSDSSN 121

Query: 136 HVFGVEFDVFKNQEFNDIDEN--HVGIDVNSLTSVSAHAAGYWPDNQTDSSGSNSNSGTG 193
            +  VEFD +    ++  D N  H+GIDVN + S+      +                  
Sbjct: 122 QIVAVEFDTYFAHSYDPWDPNYRHIGIDVNGIESIKTVQWDWINGGVAF----------- 170

Query: 194 DDEKSFKELKLNNGKNYQVWIDYADSFINITMVEAGMKRPKRPLLSVPLNLSGVLEDEMY 253
                     L   K     + Y                     ++  ++L  +L + + 
Sbjct: 171 -----ATITYLAPNKTLIASLVYPS-------------NQTTFSVAASVDLKEILPEWVR 212

Query: 254 VGFTAATGQL--VESHKILAWSFSNT 277
           VGF+AATG    VE+H +L+WSF++T
Sbjct: 213 VGFSAATGYPTEVETHDVLSWSFTST 238

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  181 bits (460), Expect = 9e-53
 Identities = 54/272 (19%), Positives = 111/272 (40%), Gaps = 26/272 (9%)

Query: 369 ENVIGVGGNGKVYKGVLEGGGAEIAVKRISHE--NDGGTRAFLAEISSLGRLKHKSLVGL 426
           +  IG G    VYKG+      E+A   +          + F  E   L  L+H ++V  
Sbjct: 14  DIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRF 73

Query: 427 RGWCK---REKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHE 483
               +   + K  ++LV + M +G+L  ++ +      +  +      + +  G+ +LH 
Sbjct: 74  YDSWESTVKGKKCIVLVTELMTSGTLKTYLKRFKV---MKIKVLRSWCRQILKGLQFLHT 130

Query: 484 GWEKKVLHRDIKSSNVLLDKEMNG-RLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFS 542
                ++HRD+K  N+ +       ++GD GLA +           V+GT  ++APE++ 
Sbjct: 131 RT-PPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASF---AKAVIGTPEFMAPEMY- 185

Query: 543 SGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRAKGG 602
             +     DV+ FG+ +LE+ +   P  E +      ++  +  G    +          
Sbjct: 186 EEKYDESVDVYAFGMCMLEMATSEYPYSECQN--AAQIYRRVTSGVKPAS---------- 233

Query: 603 FDEDEVERVLHLGLLCAYPDPRARPTMRQVVK 634
           FD+  +  V  +   C   +   R +++ ++ 
Sbjct: 234 FDKVAIPEVKEIIEGCIRQNKDERYSIKDLLN 265

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  180 bits (458), Expect = 5e-52
 Identities = 70/293 (23%), Positives = 128/293 (43%), Gaps = 36/293 (12%)

Query: 366 FSEENVIGVGGNGKVYKGVLEGGGA--EIAVKRIS-HENDGGTRAFLAEISSLGRL-KHK 421
              ++VIG G  G+V K  ++  G   + A+KR+  + +    R F  E+  L +L  H 
Sbjct: 12  IKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHP 71

Query: 422 SLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMM-------------LSCEERI 468
           +++ L G C+   G L L  +Y  +G+L  ++ +                   LS ++ +
Sbjct: 72  NIINLLGACEHR-GYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLL 130

Query: 469 RVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTR 528
               DVA G+ YL    +K+ +HRD+ + N+L+ +    ++ DFGL+R          T 
Sbjct: 131 HFAADVARGMDYL---SQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYV--KKTM 185

Query: 529 VVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGK 588
               V ++A E  +    +T +DV+ +G+L+ E++S       G       ++E + QG 
Sbjct: 186 GRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTC--AELYEKLPQGY 243

Query: 589 LLDALDARLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLEGKIE 641
            L+              +  + V  L   C    P  RP+  Q++  L   +E
Sbjct: 244 RLE-----------KPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLE 285

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  178 bits (453), Expect = 9e-52
 Identities = 61/275 (22%), Positives = 113/275 (41%), Gaps = 21/275 (7%)

Query: 366 FSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHE--NDGGTRAFLAEISSLGRLKHKSL 423
           +     IG G  G+  K   +  G  +  K + +    +   +  ++E++ L  LKH ++
Sbjct: 6   YEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNI 65

Query: 424 VGLRGWC-KREKGSLMLVYDYMENGSLDKWIFQCDGS-MMLSCEERIRVLKDVAAGVLYL 481
           V        R   +L +V +Y E G L   I +       L  E  +RV+  +   +   
Sbjct: 66  VRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKEC 125

Query: 482 HE--GWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPE 539
           H        VLHRD+K +NV LD + N +LGDFGLAR+  H    +    VGT  Y++PE
Sbjct: 126 HRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKA-FVGTPYYMSPE 184

Query: 540 VFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRA 599
             +    + ++D++  G L+ E+ +   P         + +   + +GK           
Sbjct: 185 QMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQ---KELAGKIREGKFRR-------- 233

Query: 600 KGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVK 634
                    + +  +           RP++ ++++
Sbjct: 234 ---IPYRYSDELNEIITRMLNLKDYHRPSVEEILE 265

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  179 bits (455), Expect = 1e-51
 Identities = 68/299 (22%), Positives = 120/299 (40%), Gaps = 39/299 (13%)

Query: 366 FSEENVIGVGGNGKVYKGVLEG-----GGAEIAVKRISHENDGGTR-AFLAEISSLGRLK 419
            S    +G G  GKV +    G         +AVK +        R A ++E+  L  L 
Sbjct: 25  LSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLG 84

Query: 420 -HKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQC---------------DGSMMLS 463
            H ++V L G C    G  +++ +Y   G L  ++ +                D  + L 
Sbjct: 85  NHMNIVNLLGAC-TIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALD 143

Query: 464 CEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLAR-MHGHGQ 522
            E+ +     VA G+ +L     K  +HRD+ + N+LL      ++ DFGLAR +     
Sbjct: 144 LEDLLSFSYQVAKGMAFLAS---KNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSN 200

Query: 523 VASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWE 582
                     V ++APE   +   + ++DV+ +GI + E+ S       G P      ++
Sbjct: 201 YVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPV-DSKFYK 259

Query: 583 LMVQGKLLDALDARLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLEGKIE 641
           ++ +G  +              E     +  +   C   DP  RPT +Q+V+++E +I 
Sbjct: 260 MIKEGFRML-----------SPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQIS 307

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  176 bits (447), Expect = 6e-51
 Identities = 58/272 (21%), Positives = 106/272 (38%), Gaps = 28/272 (10%)

Query: 366 FSEENVIGVGGNGKVYKGVLEGGGAEIAVKRIS---HENDGGTRAFLAEISSLGRLKHKS 422
           F     +G G  G VY    +     +A+K +     E  G       E+     L+H +
Sbjct: 8   FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 67

Query: 423 LVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLH 482
           ++ L G+   +   + L+ +Y   G++ + + +         +     + ++A  + Y H
Sbjct: 68  ILRLYGYF-HDATRVYLILEYAPLGTVYRELQKLSK---FDEQRTATYITELANALSYCH 123

Query: 483 EGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFS 542
               K+V+HRDIK  N+LL      ++ DFG +      +    T + GT+ YL PE+  
Sbjct: 124 S---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTTLCGTLDYLPPEMIE 177

Query: 543 SGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRAKGG 602
                 + D++  G+L  E L G+ P E                    +      R +  
Sbjct: 178 GRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQ---------------ETYKRISRVEFT 222

Query: 603 FDEDEVERVLHLGLLCAYPDPRARPTMRQVVK 634
           F +   E    L       +P  RP +R+V++
Sbjct: 223 FPDFVTEGARDLISRLLKHNPSQRPMLREVLE 254

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  177 bits (450), Expect = 6e-51
 Identities = 66/278 (23%), Positives = 114/278 (41%), Gaps = 31/278 (11%)

Query: 363 TKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHE---NDGGTRAFLAEISSLGRLK 419
            K FS+   IG G  G VY          +A+K++S+    ++   +  + E+  L +L+
Sbjct: 14  EKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLR 73

Query: 420 HKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVL 479
           H + +  RG     + +  LV +Y    + D           L   E   V      G+ 
Sbjct: 74  HPNTIQYRGCY-LREHTAWLVMEYCLGSASDLLEVH---KKPLQEVEIAAVTHGALQGLA 129

Query: 480 YLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPE 539
           YLH      ++HRD+K+ N+LL +    +LGDFG A +     +A     VGT  ++APE
Sbjct: 130 YLHS---HNMIHRDVKAGNILLSEPGLVKLGDFGSASI-----MAPANSFVGTPYWMAPE 181

Query: 540 VFSS---GRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDAR 596
           V  +   G+   + DV+  GI  +E+   + P+     N +  ++ +  Q +        
Sbjct: 182 VILAMDEGQYDGKVDVWSLGITCIELAERKPPLFN--MNAMSALYHIA-QNESPALQSGH 238

Query: 597 LRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVK 634
                       E   +    C    P+ RPT   ++K
Sbjct: 239 WS----------EYFRNFVDSCLQKIPQDRPTSEVLLK 266

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 317

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  176 bits (448), Expect = 1e-50
 Identities = 53/278 (19%), Positives = 115/278 (41%), Gaps = 26/278 (9%)

Query: 366 FSEENVIGVGGNGKVYKGVLEGGGAE----IAVKRISHENDG-GTRAFLAEISSLGRLKH 420
           F +  V+G G  G VYKG+    G +    +A+K +         +  L E   +  + +
Sbjct: 11  FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 70

Query: 421 KSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLY 480
             +  L G C     ++ L+   M  G L  ++ +   ++    +  +     +A G+ Y
Sbjct: 71  PHVCRLLGIC--LTSTVQLITQLMPFGCLLDYVREHKDNI--GSQYLLNWCVQIAKGMNY 126

Query: 481 LHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLAR-MHGHGQVASTTRVVGTVGYLAPE 539
           L    +++++HRD+ + NVL+    + ++ DFGLA+ +    +          + ++A E
Sbjct: 127 L---EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALE 183

Query: 540 VFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRA 599
                  + Q+DV+ +G+ + E+++      +G P     +  ++ +G+ L         
Sbjct: 184 SILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPA--SEISSILEKGERLP-------- 233

Query: 600 KGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLE 637
                      V  + + C   D  +RP  R+++    
Sbjct: 234 ---QPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFS 268

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 325

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  176 bits (448), Expect = 2e-50
 Identities = 68/303 (22%), Positives = 119/303 (39%), Gaps = 44/303 (14%)

Query: 366 FSEENVIGVGGNGKVYKGVLEGGG-----AEIAVKRISHENDGGTR-AFLAEISSLGRL- 418
                V+G G  GKV      G        ++AVK +  + D   R A ++E+  + +L 
Sbjct: 39  LEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLG 98

Query: 419 KHKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSM------------------ 460
            H+++V L G C    G + L+++Y   G L  ++                         
Sbjct: 99  SHENIVNLLGAC-TLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEED 157

Query: 461 --MLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLAR-M 517
             +L+ E+ +     VA G+ +L     K  +HRD+ + NVL+      ++ DFGLAR +
Sbjct: 158 LNVLTFEDLLCFAYQVAKGMEFLEF---KSCVHRDLAARNVLVTHGKVVKICDFGLARDI 214

Query: 518 HGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLV 577
                          V ++APE    G  + ++DV+ +GIL+ E+ S       G P   
Sbjct: 215 MSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPV-D 273

Query: 578 EMVWELMVQGKLLDALDARLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLE 637
              ++L+  G  +D                 E +  +   C   D R RP+   +   L 
Sbjct: 274 ANFYKLIQNGFKMD-----------QPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLG 322

Query: 638 GKI 640
            ++
Sbjct: 323 CQL 325

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 308

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  175 bits (445), Expect = 3e-50
 Identities = 61/292 (20%), Positives = 129/292 (44%), Gaps = 31/292 (10%)

Query: 366 FSEENVIGVGGNGKVYKGVLEG-----GGAEIAVKRISHENDGGTRA-FLAEISSLGRLK 419
            +    +G G  G VY+GV +G         +A+K ++       R  FL E S +    
Sbjct: 22  ITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFN 81

Query: 420 HKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMM-------LSCEERIRVLK 472
              +V L G   +     +++ + M  G L  ++     +M         S  + I++  
Sbjct: 82  CHHVVRLLGVVSQG-QPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAG 140

Query: 473 DVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLAR-MHGHGQVASTTRVVG 531
           ++A G   +      K +HRD+ + N ++ ++   ++GDFG+ R ++         + + 
Sbjct: 141 EIADG---MAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLL 197

Query: 532 TVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLD 591
            V +++PE    G  +T +DV+ FG+++ E+ +      +G  N  E V   +++G LLD
Sbjct: 198 PVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSN--EQVLRFVMEGGLLD 255

Query: 592 ALDARLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLEGKIEAG 643
                        ++  + +  L  +C   +P+ RP+  +++  ++ ++E G
Sbjct: 256 -----------KPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEPG 296

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  173 bits (440), Expect = 5e-50
 Identities = 61/282 (21%), Positives = 110/282 (39%), Gaps = 27/282 (9%)

Query: 364 KGFSEENVIGVGGNGKVYKGVLE---GGGAEIAVKRISHE---NDGGTRAFLAEISSLGR 417
           K       +G G  G V +G  +   G    +AVK +  +          F+ E++++  
Sbjct: 8   KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHS 67

Query: 418 LKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAG 477
           L H++L+ L G        + +V +    GSL   + +  G          R    VA G
Sbjct: 68  LDHRNLIRLYGVV--LTPPMKMVTELAPLGSLLDRLRKHQGH--FLLGTLSRYAVQVAEG 123

Query: 478 VLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARM--HGHGQVASTTRVVGTVGY 535
           + YL     K+ +HRD+ + N+LL      ++GDFGL R                    +
Sbjct: 124 MGYLES---KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAW 180

Query: 536 LAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDA 595
            APE   +   S  +D + FG+ + E+ +  +    G  N  +++ ++  +G+ L     
Sbjct: 181 CAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGL-NGSQILHKIDKEGERLP---- 235

Query: 596 RLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLE 637
                    ED  + + ++ + C    P  RPT   +   L 
Sbjct: 236 -------RPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLL 270

>d1n47a_ b.29.1.1 (A:) Legume lectin {Hairy vetch (Vicia villosa), isolectin b4 [TaxId: 3911]} Length = 233

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Legume lectin
species: Hairy vetch (Vicia villosa), isolectin b4 [TaxId: 3911]

 Score =  172 bits (436), Expect = 6e-50
 Identities = 71/268 (26%), Positives = 103/268 (38%), Gaps = 49/268 (18%)

Query: 21  ESISAVDFVFNGF--NSSNLSLYGTATVES-RILTLTNST-----TFTIGRALYPSKIPT 72
           ES S   F F  F  N +NL L   A V S   L LT          ++GRALY + I  
Sbjct: 2   ESTS---FSFTNFNPNQNNLILQEDALVNSAGTLELTAVAAGAPVPDSLGRALYAAPIHI 58

Query: 73  KRPNSSYVYPFSTSFIFAMAPYKGVLAGHGLVFLFVPFHGIKGATEAQHLGLFNRTNDGN 132
              +++ +  F+TSF F MA         GL F   P      A     LGLF      +
Sbjct: 59  H--DNTTLASFTTSFSFVMAAPAAAAVADGLAFFLAPPDTQPQAR-GGFLGLFADRA-HD 114

Query: 133 SSNHVFGVEFDVFKNQEFNDIDENHVGIDVNSLTSVSAHAAGYWPDNQTDSSGSNSNSGT 192
           +S     VEFD + N    D +  H+GID N + S                         
Sbjct: 115 ASYQTVAVEFDTYSNAW--DPNYTHIGIDTNGIESKKTTP-------------------- 152

Query: 193 GDDEKSFKELKLNNGKNYQVWIDYADSFINITMVEAGMKRPKRPLLSVPLNLSGVLEDEM 252
                      +  G+   + I Y  S   +              +S  ++L  +L + +
Sbjct: 153 ---------FDMVYGEKANIVITYQASTKALAASLVFPVSQTSYAVSARVDLRDILPEYV 203

Query: 253 YVGFTAATGQ---LVESHKILAWSFSNT 277
            VGF+A TG    +VE+H I++WSF+ +
Sbjct: 204 RVGFSATTGLNAGVVETHDIVSWSFAVS 231

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  172 bits (437), Expect = 1e-49
 Identities = 66/302 (21%), Positives = 116/302 (38%), Gaps = 38/302 (12%)

Query: 344 DWELEYWPHRITYQEIEAATKGFSEENVIGVGGNGKVYKGVL---EGGGAEIAVKRISHE 400
           D+E++    RI                 IG G  G V++G+    E     +A+K   + 
Sbjct: 1   DYEIQ--RERIELGR------------CIGEGQFGDVHQGIYMSPENPALAVAIKTCKNC 46

Query: 401 NDGGTRA-FLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGS 459
                R  FL E  ++ +  H  +V L G     +  + ++ +    G L  ++     S
Sbjct: 47  TSDSVREKFLQEALTMRQFDHPHIVKLIGVI--TENPVWIIMELCTLGELRSFLQVRKYS 104

Query: 460 MMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHG 519
             L     I     ++  + YL     K+ +HRDI + NVL+      +LGDFGL+R   
Sbjct: 105 --LDLASLILYAYQLSTALAYLES---KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYME 159

Query: 520 HGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEM 579
                  ++    + ++APE  +  R ++ +DV+ FG+ + E+L       +G  N    
Sbjct: 160 DSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKN--ND 217

Query: 580 VWELMVQGKLLDALDARLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLEGK 639
           V   +  G+ L               +    +  L   C   DP  RP   ++   L   
Sbjct: 218 VIGRIENGERLP-----------MPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTI 266

Query: 640 IE 641
           +E
Sbjct: 267 LE 268

>d1fnya_ b.29.1.1 (A:) Legume lectin {Black locust (Robinia pseudoacacia) [TaxId: 35938]} Length = 237

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Legume lectin
species: Black locust (Robinia pseudoacacia) [TaxId: 35938]

 Score =  171 bits (434), Expect = 1e-49
 Identities = 67/265 (25%), Positives = 105/265 (39%), Gaps = 43/265 (16%)

Query: 24  SAVDFVFNGF--NSSNLSLYGTATVES-RILTLTN-----STTFTIGRALYPSKIPTKRP 75
            ++ F F  F  N   L   G A V S  +L LTN      ++ ++GRALY +       
Sbjct: 2   GSLSFSFPKFAPNQPYLINQGDALVTSTGVLQLTNVVNGVPSSKSLGRALYAAPFQIWDS 61

Query: 76  NSSYVYPFSTSFIFAMAPYKGVLAGHGLVFLFVPFHGIKGATEAQHLGLFNRTNDGNSSN 135
            +  V  F TSF F +          GL F   P    +       LG+F      N SN
Sbjct: 62  TTGNVASFVTSFTFIIQAPNPATTADGLAFFLAP-VDTQPLDLGGMLGIFK-DGYFNKSN 119

Query: 136 HVFGVEFDVFKNQEFNDIDENHVGIDVNSLTSVSAHAAGYWPDNQTDSSGSNSNSGTGDD 195
            +  VEFD F N ++ D    H+GI+VNS+ S+      +                    
Sbjct: 120 QIVAVEFDTFSNGDW-DPKGRHLGINVNSIESIKTVPWNW-------------------- 158

Query: 196 EKSFKELKLNNGKNYQVWIDYADSFINITMVEAGMKRPKRPLLSVPLNLSGVLEDEMYVG 255
                     NG+   V+I Y  S  ++T            ++   +++  VL + +  G
Sbjct: 159 ---------TNGEVANVFISYEASTKSLTASLVYPSLETSFIIDAIVDVKIVLPEWVRFG 209

Query: 256 FTAATG---QLVESHKILAWSFSNT 277
           F+A TG     V+++ +L+WSF + 
Sbjct: 210 FSATTGIDKGYVQTNDVLSWSFESN 234

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  172 bits (436), Expect = 3e-49
 Identities = 58/270 (21%), Positives = 112/270 (41%), Gaps = 24/270 (8%)

Query: 370 NVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGW 429
             +G G  GKVYK   +      A K I  +++     ++ EI  L    H ++V L   
Sbjct: 18  GELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDA 77

Query: 430 CKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKV 489
               + +L ++ ++   G++D  + + +    L+  +   V K     + YLH   + K+
Sbjct: 78  F-YYENNLWILIEFCAGGAVDAVMLELERP--LTESQIQVVCKQTLDALNYLH---DNKI 131

Query: 490 LHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRA--- 546
           +HRD+K+ N+L   + + +L DFG++  +        +  +GT  ++APEV     +   
Sbjct: 132 IHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDS-FIGTPYWMAPEVVMCETSKDR 190

Query: 547 --STQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRAKGGFD 604
               + DV+  GI ++E+     P  E  P        + V  K+  +    L     + 
Sbjct: 191 PYDYKADVWSLGITLIEMAEIEPPHHELNP--------MRVLLKIAKSEPPTLAQPSRWS 242

Query: 605 EDEVERVLHLGLLCAYPDPRARPTMRQVVK 634
            +           C   +  AR T  Q+++
Sbjct: 243 SN----FKDFLKKCLEKNVDARWTTSQLLQ 268

>d1dhkb_ b.29.1.1 (B:) Phytohemagglutinin-L, PHA-L, also arcelin {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} Length = 204

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Phytohemagglutinin-L, PHA-L, also arcelin
species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]

 Score =  164 bits (417), Expect = 1e-47
 Identities = 56/258 (21%), Positives = 96/258 (37%), Gaps = 60/258 (23%)

Query: 24  SAVDFVFNGFNSSNLSLYGTATVESR-ILTLTNSTTFTIGRALYPSKIPTKRPNSSYVYP 82
           +   F+ + FN +NL L G ATV S   L L+ ++  ++ RA Y + I  +   +  V  
Sbjct: 2   TETSFIIDAFNKTNLILQGDATVSSNGNLQLSYNSYDSMSRAFYSAPIQIRDSTTGNVAS 61

Query: 83  FSTSFIFAMAPYKGVLAGHGLVFLFVPFHGIKGATEAQHLGLFNRTNDGNSSNHVFGVEF 142
           F T+F   +  ++   +  GL F+ VP                       S      VEF
Sbjct: 62  FDTNFTMNIRTHRQANSAVGLDFVLVP-------------------VQPESKGDTVTVEF 102

Query: 143 DVFKNQEFNDIDENHVGIDVNSLTSVSAHAAGYWPDNQTDSSGSNSNSGTGDDEKSFKEL 202
           D F ++   D++ N +      +                                     
Sbjct: 103 DTFLSRISIDVNNNDIKSVPWDVH------------------------------------ 126

Query: 203 KLNNGKNYQVWIDYADSFINITMVEAGMKRPKRPLLSVPLNLSGVLEDEMYVGFTAATGQ 262
              +G+N +V I Y  S    ++  +     K   +S  + L   + D + VGF+A +G 
Sbjct: 127 -DYDGQNAEVRITYNSSTKVFSVSLSNPSTGKSNNVSTTVELEKEVYDWVSVGFSATSGA 185

Query: 263 L---VESHKILAWSFSNT 277
                E+H +L+WSFS+ 
Sbjct: 186 YQWSYETHDVLSWSFSSK 203

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 271

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  166 bits (421), Expect = 3e-47
 Identities = 65/272 (23%), Positives = 107/272 (39%), Gaps = 22/272 (8%)

Query: 366 FSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHEND-GGTRAFLAEISSLGRLKHKSLV 424
           +     +G G  G+V   V       +AVK +  +           EI     L H+++V
Sbjct: 7   WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVV 66

Query: 425 GLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEG 484
              G   RE     L  +Y   G L   I    G   +   +  R    + AGV+YLH  
Sbjct: 67  KFYGHR-REGNIQYLFLEYCSGGELFDRIEPDIG---MPEPDAQRFFHQLMAGVVYLHG- 121

Query: 485 WEKKVLHRDIKSSNVLLDKEMNGRLGDFGLAR-MHGHGQVASTTRVVGTVGYLAPEVFSS 543
               + HRDIK  N+LLD+  N ++ DFGLA     + +     ++ GT+ Y+APE+   
Sbjct: 122 --IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKR 179

Query: 544 GRASTQ-TDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRAKGG 602
                +  DV+  GI++  +L+G     +   +  +   +   +   L+           
Sbjct: 180 REFHAEPVDVWSCGIVLTAMLAG-ELPWDQPSDSCQEYSDWKEKKTYLNPWK-------- 230

Query: 603 FDEDEVERVLHLGLLCAYPDPRARPTMRQVVK 634
              D     L   +L    +P AR T+  + K
Sbjct: 231 -KIDSAPLALLHKILV--ENPSARITIPDIKK 259

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

 Score =  168 bits (426), Expect = 4e-47
 Identities = 58/293 (19%), Positives = 109/293 (37%), Gaps = 30/293 (10%)

Query: 348 EYWPHRITYQEIEAATKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRA 407
           +Y+P  +  +  +     +     +G G  G V++      G   A K +   ++     
Sbjct: 11  QYYPQPVEIKH-DHVLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKET 69

Query: 408 FLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEER 467
              EI ++  L+H +LV L      +   ++++Y++M  G L + +        +S +E 
Sbjct: 70  VRKEIQTMSVLRHPTLVNLHDAF-EDDNEMVMIYEFMSGGELFEKVADEHNK--MSEDEA 126

Query: 468 IRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGR--LGDFGLARMHGHGQVAS 525
           +  ++ V  G+ ++H   E   +H D+K  N++   + +    L DFGL       Q   
Sbjct: 127 VEYMRQVCKGLCHMH---ENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVK 183

Query: 526 TTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMV 585
            T   GT  + APEV         TD++  G+L   +LSG  P      +          
Sbjct: 184 VT--TGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDD---------- 231

Query: 586 QGKLLDALDARLRAKGGFDEDEVERV----LHLGLLCAYPDPRARPTMRQVVK 634
                + L          D+     +              DP  R T+ Q ++
Sbjct: 232 -----ETLRNVKSCDWNMDDSAFSGISEDGKDFIRKLLLADPNTRMTIHQALE 279

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  166 bits (420), Expect = 7e-47
 Identities = 65/298 (21%), Positives = 121/298 (40%), Gaps = 36/298 (12%)

Query: 366 FSEENVIGVGGNGKVYKGVLEGG-----GAEIAVKRISHE-NDGGTRAFLAEISSLGRLK 419
                 +G G  G+V +    G         +AVK +         RA ++E+  L  + 
Sbjct: 15  LKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIG 74

Query: 420 HKS-LVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMM-------------LSCE 465
           H   +V L G C +  G LM++ ++ + G+L  ++       +             L+ E
Sbjct: 75  HHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLE 134

Query: 466 ERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLAR-MHGHGQVA 524
             I     VA G+ +L     +K +HRD+ + N+LL ++   ++ DFGLAR ++      
Sbjct: 135 HLICYSFQVAKGMEFLAS---RKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYV 191

Query: 525 STTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELM 584
                   + ++APE       + Q+DV+ FG+L+ E+ S       G   + E     +
Sbjct: 192 RKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGV-KIDEEFCRRL 250

Query: 585 VQGKLLDALDARLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLEGKIEA 642
            +G  +              +     +    L C + +P  RPT  ++V+ L   ++A
Sbjct: 251 KEGTRMR-----------APDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQA 297

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  164 bits (417), Expect = 2e-46
 Identities = 57/272 (20%), Positives = 113/272 (41%), Gaps = 21/272 (7%)

Query: 363 TKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKS 422
            K ++    IG G +G VY  +    G E+A+++++ +        + EI  +   K+ +
Sbjct: 19  KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPN 78

Query: 423 LVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLH 482
           +V            L +V +Y+  GSL   + +          +   V ++    + +LH
Sbjct: 79  IVNYLDSY-LVGDELWVVMEYLAGGSLTDVVTETCMDE----GQIAAVCRECLQALEFLH 133

Query: 483 EGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFS 542
                +V+HRDIKS N+LL  + + +L DFG        Q +  + +VGT  ++APEV +
Sbjct: 134 ---SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ-SKRSTMVGTPYWMAPEVVT 189

Query: 543 SGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRAKGG 602
                 + D++  GI+ +E++ G  P      N +  ++ +   G         L+    
Sbjct: 190 RKAYGPKVDIWSLGIMAIEMIEGEPPYLN--ENPLRALYLIATNGTP------ELQNPEK 241

Query: 603 FDEDEVERVLHLGLLCAYPDPRARPTMRQVVK 634
                          C   D   R + +++++
Sbjct: 242 LSAI----FRDFLNRCLDMDVEKRGSAKELLQ 269

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

 Score =  166 bits (422), Expect = 2e-46
 Identities = 61/270 (22%), Positives = 102/270 (37%), Gaps = 29/270 (10%)

Query: 371 VIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWC 430
            +G G  G V++ V +  G     K I+            EIS + +L H  L+ L    
Sbjct: 36  ELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAF 95

Query: 431 KREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVL 490
             +K  ++L+ +++  G L   I   D    +S  E I  ++    G+ ++HE     ++
Sbjct: 96  -EDKYEMVLILEFLSGGELFDRIAAEDYK--MSEAEVINYMRQACEGLKHMHE---HSIV 149

Query: 491 HRDIKSSNVLLDKEMNGR--LGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRAST 548
           H DIK  N++ + +      + DFGLA      ++        T  + APE+        
Sbjct: 150 HLDIKPENIMCETKKASSVKIIDFGLATKLNPDEI--VKVTTATAEFAAPEIVDREPVGF 207

Query: 549 QTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRAKGGFDEDEV 608
            TD++  G+L   +LSG  P                     L+ L    R    FDED  
Sbjct: 208 YTDMWAIGVLGYVLLSGLSPFAGEDD---------------LETLQNVKRCDWEFDEDAF 252

Query: 609 ERV----LHLGLLCAYPDPRARPTMRQVVK 634
             V              +PR R T+   ++
Sbjct: 253 SSVSPEAKDFIKNLLQKEPRKRLTVHDALE 282

>d1ioaa_ b.29.1.1 (A:) Phytohemagglutinin-L, PHA-L, also arcelin {Kidney bean (Phaseolus vulgaris), G02771, arcelin-5a [TaxId: 3885]} Length = 228

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Phytohemagglutinin-L, PHA-L, also arcelin
species: Kidney bean (Phaseolus vulgaris), G02771, arcelin-5a [TaxId: 3885]

 Score =  162 bits (411), Expect = 2e-46
 Identities = 64/265 (24%), Positives = 106/265 (40%), Gaps = 51/265 (19%)

Query: 24  SAVDFVFNGFNS-SNLSLYGTATVESR-ILTLTNSTT------FTIGRALYPSKIPTKRP 75
           +   F F  F++   L L G AT+ S+  L LT   +       ++GRA Y   I  K  
Sbjct: 2   TETSFNFPNFHTDDKLILQGNATISSKGQLQLTGVGSNELPRVDSLGRAFYSDPIQIK-- 59

Query: 76  NSSYVYPFSTSFIFAMAPYKGVLAGHGLVFLFVPFHGIKGATEAQHLGLFNRTNDGNSSN 135
           +S+ V  F+T+F F +      ++ +GL F  VP        + + LG+FN TN+   + 
Sbjct: 60  DSNNVASFNTNFTFIIRAKNQSISAYGLAFALVP-VNSPPQKKQEFLGIFN-TNNPEPNA 117

Query: 136 HVFGVEFDVFKNQEFNDIDENHVGIDVNSLTSVSAHAAGYWPDNQTDSSGSNSNSGTGDD 195
               V F+ FKN    D D+N +   VN                                
Sbjct: 118 RTVAVVFNTFKN--RIDFDKNFIKPYVNENCDFH-------------------------- 149

Query: 196 EKSFKELKLNNGKNYQVWIDYADSFINITMVEAGMKRPKRPLLSVPLNLSGVLEDEMYVG 255
                     NG+   V I Y  S  ++ +         +  +S  ++L   +++ + VG
Sbjct: 150 --------KYNGEKTDVQITYDSSNNDLRVFLHFTVSQVKCSVSATVHLEKEVDEWVSVG 201

Query: 256 FTAATG---QLVESHKILAWSFSNT 277
           F+  +G      E+H +L+WSFS+ 
Sbjct: 202 FSPTSGLTEDTTETHDVLSWSFSSK 226

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  162 bits (411), Expect = 1e-45
 Identities = 69/295 (23%), Positives = 128/295 (43%), Gaps = 40/295 (13%)

Query: 366 FSEENVIGVGGNGKVYKGVLEG-------GGAEIAVKRISHE-NDGGTRAFLAEISSLGR 417
                 +G G  G+V      G          ++AVK +  +  +      ++E+  +  
Sbjct: 15  LVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKM 74

Query: 418 L-KHKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMM-------------LS 463
           + KHK+++ L G C  + G L ++ +Y   G+L +++       +             LS
Sbjct: 75  IGKHKNIINLLGAC-TQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLS 133

Query: 464 CEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQV 523
            ++ +     VA G+ YL     KK +HRD+ + NVL+ ++   ++ DFGLAR   H   
Sbjct: 134 SKDLVSCAYQVARGMEYLAS---KKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDY 190

Query: 524 ASTTRVV-GTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWE 582
              T      V ++APE       + Q+DV+ FG+L+ E+ +       G P  VE +++
Sbjct: 191 YKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVP--VEELFK 248

Query: 583 LMVQGKLLDALDARLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLE 637
           L+ +G  +D              +    +  +   C +  P  RPT +Q+V+ L+
Sbjct: 249 LLKEGHRMD-----------KPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLD 292

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  162 bits (410), Expect = 1e-45
 Identities = 57/278 (20%), Positives = 104/278 (37%), Gaps = 26/278 (9%)

Query: 366 FSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHE---NDGGTRAFLAEISSLGRLKHKS 422
           F    ++G G    V          E A+K +       +        E   + RL H  
Sbjct: 10  FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 69

Query: 423 LVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLH 482
            V L     ++   L     Y +NG L K+I +                 ++ + + YLH
Sbjct: 70  FVKLYFTF-QDDEKLYFGLSYAKNGELLKYIRKIGS---FDETCTRFYTAEIVSALEYLH 125

Query: 483 EGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLAR-MHGHGQVASTTRVVGTVGYLAPEVF 541
               K ++HRD+K  N+LL+++M+ ++ DFG A+ +    + A     VGT  Y++PE+ 
Sbjct: 126 G---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELL 182

Query: 542 SSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRAKG 601
           +   A   +D++  G +I ++++G  P   G   L+                   ++ + 
Sbjct: 183 TEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLI---------------FQKIIKLEY 227

Query: 602 GFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLEGK 639
            F E    +   L       D   R    ++      K
Sbjct: 228 DFPEKFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLK 265

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score =  150 bits (380), Expect = 1e-41
 Identities = 54/287 (18%), Positives = 115/287 (40%), Gaps = 27/287 (9%)

Query: 366 FSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHE---NDGGTRAFLAEISSLGRLKHKS 422
           +    ++G GG  +V+         ++AVK +  +   +      F  E  +   L H +
Sbjct: 9   YELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPA 68

Query: 423 LVGLRGWCKRE---KGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVL 479
           +V +    + E        +V +Y++  +L   +        ++ +  I V+ D    + 
Sbjct: 69  IVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGP---MTPKRAIEVIADACQALN 125

Query: 480 YLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHG--QVASTTRVVGTVGYLA 537
           +     +  ++HRD+K +N+++      ++ DFG+AR        V  T  V+GT  YL+
Sbjct: 126 FS---HQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLS 182

Query: 538 PEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDARL 597
           PE         ++DV+  G ++ EVL+G  P      + V + ++ + +  +  +     
Sbjct: 183 PEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTG--DSPVSVAYQHVREDPIPPSA---- 236

Query: 598 RAKGGFDEDEVERVLHLGLLCAYPDPRARP-TMRQVVKVLEGKIEAG 643
                  E     +  + L     +P  R  T  ++   L  ++  G
Sbjct: 237 -----RHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLV-RVHNG 277

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 307

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  149 bits (378), Expect = 6e-41
 Identities = 62/284 (21%), Positives = 107/284 (37%), Gaps = 26/284 (9%)

Query: 356 YQEIEAATKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRA-FLAEISS 414
           +++ E     +   +V+G G   +V     +     +A+K I+ +   G       EI+ 
Sbjct: 1   WKQAEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAV 60

Query: 415 LGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDV 474
           L ++KH ++V L        G L L+   +  G L   I +       +  +  R++  V
Sbjct: 61  LHKIKHPNIVALDDIY-ESGGHLYLIMQLVSGGELFDRIVEKG---FYTERDASRLIFQV 116

Query: 475 AAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRVVGTVG 534
              V YLH+        +        LD++    + DFGL++M   G V ST    GT G
Sbjct: 117 LDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLST--ACGTPG 174

Query: 535 YLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALD 594
           Y+APEV +    S   D +  G++   +L G  P  +                      +
Sbjct: 175 YVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDA---------------KLFE 219

Query: 595 ARLRAKGGFDEDEVERV----LHLGLLCAYPDPRARPTMRQVVK 634
             L+A+  FD    + +              DP  R T  Q ++
Sbjct: 220 QILKAEYEFDSPYWDDISDSAKDFIRHLMEKDPEKRFTCEQALQ 263

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} Length = 321

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  147 bits (371), Expect = 8e-40
 Identities = 49/270 (18%), Positives = 99/270 (36%), Gaps = 30/270 (11%)

Query: 371 VIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWC 430
            +G G  G V++ V          K +  +          EIS L   +H++++ L    
Sbjct: 12  DLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTD-QVLVKKEISILNIARHRNILHLHESF 70

Query: 431 KREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVL 490
           +     L+++++++    + + I        L+  E +  +  V   + +LH      + 
Sbjct: 71  E-SMEELVMIFEFISGLDIFERINTSAFE--LNEREIVSYVHQVCEALQFLHS---HNIG 124

Query: 491 HRDIKSSNVLLDKEMNGR--LGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRAST 548
           H DI+  N++     +    + +FG AR    G             Y APEV      ST
Sbjct: 125 HFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNFRLLF--TAPEYYAPEVHQHDVVST 182

Query: 549 QTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRAKGGFDEDEV 608
            TD++  G L+  +LSG  P                        ++  + A+  FDE+  
Sbjct: 183 ATDMWSLGTLVYVLLSGINPFLAETNQ---------------QIIENIMNAEYTFDEEAF 227

Query: 609 ERV----LHLGLLCAYPDPRARPTMRQVVK 634
           + +    +         + ++R T  + ++
Sbjct: 228 KEISIEAMDFVDRLLVKERKSRMTASEALQ 257

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

 Score =  144 bits (363), Expect = 3e-39
 Identities = 62/285 (21%), Positives = 119/285 (41%), Gaps = 36/285 (12%)

Query: 366 FSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGT---------RAFLAEISSLG 416
           +  + ++G G +  V + + +    E AVK I     G            A L E+  L 
Sbjct: 5   YEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILR 64

Query: 417 RLK-HKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVA 475
           ++  H +++ L+           LV+D M+ G L  ++ +      LS +E  ++++ + 
Sbjct: 65  KVSGHPNIIQLKDTY-ETNTFFFLVFDLMKKGELFDYLTEKVT---LSEKETRKIMRALL 120

Query: 476 AGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGY 535
             +  LH+     ++HRD+K  N+LLD +MN +L DFG +     G+      V GT  Y
Sbjct: 121 EVICALHK---LNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGE--KLREVCGTPSY 175

Query: 536 LAPEVFSSGRA------STQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKL 589
           LAPE+              + D++  G+++  +L+G  P    K     ++  +++ G  
Sbjct: 176 LAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQ---MLMLRMIMSGNY 232

Query: 590 LDALDARLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVK 634
                 +  +    D  +  + L    L     P+ R T  + + 
Sbjct: 233 ------QFGSPEWDDYSDTVKDLVSRFLV--VQPQKRYTAEEALA 269

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 364

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

 Score =  144 bits (364), Expect = 2e-38
 Identities = 64/275 (23%), Positives = 105/275 (38%), Gaps = 33/275 (12%)

Query: 366 FSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHE---NDGGTRAFLAE---ISSLGRLK 419
           FS   +IG GG G+VY       G   A+K +  +      G    L E   +S +    
Sbjct: 6   FSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGD 65

Query: 420 HKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVL 479
              +V +          L  + D M  G L   + Q          +      ++  G+ 
Sbjct: 66  CPFIVCMSYAF-HTPDKLSFILDLMNGGDLHYHLSQHGVFSE---ADMRFYAAEIILGLE 121

Query: 480 YLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPE 539
           ++H    + V++RD+K +N+LLD+  + R+ D GLA      +       VGT GY+APE
Sbjct: 122 HMHN---RFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKK---PHASVGTHGYMAPE 175

Query: 540 VFSSGRA-STQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQG--KLLDALDAR 596
           V   G A  +  D F  G ++ ++L G  P  + K      +  + +    +L D+    
Sbjct: 176 VLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDSFSPE 235

Query: 597 LRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQ 631
           LR         +E +L         D   R     
Sbjct: 236 LR-------SLLEGLLQ-------RDVNRRLGCLG 256

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} Length = 320

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  142 bits (359), Expect = 3e-38
 Identities = 59/273 (21%), Positives = 108/273 (39%), Gaps = 27/273 (9%)

Query: 366 FSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHE---NDGGTRAFLAEISSLGR-LKHK 421
           F    ++G G  GKV+    +      A+K +  +    D      + E   L    +H 
Sbjct: 4   FILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHP 63

Query: 422 SLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYL 481
            L  +     + K +L  V +Y+  G L   I  C                ++  G+ +L
Sbjct: 64  FLTHMFCTF-QTKENLFFVMEYLNGGDLMYHIQSCHK---FDLSRATFYAAEIILGLQFL 119

Query: 482 HEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVF 541
                K +++RD+K  N+LLDK+ + ++ DFG+ + +  G  A T    GT  Y+APE+ 
Sbjct: 120 ---HSKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGD-AKTNTFCGTPDYIAPEIL 175

Query: 542 SSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRAKG 601
              + +   D + FG+L+ E+L G+ P   G+          M        L+   +   
Sbjct: 176 LGQKYNHSVDWWSFGVLLYEMLIGQSPF-HGQDEEELFHSIRMDNPFYPRWLEKEAK--- 231

Query: 602 GFDEDEVERVLHLGLLCAYPDPRARPTMRQVVK 634
               D + ++          +P  R  +R  ++
Sbjct: 232 ----DLLVKLFV-------REPEKRLGVRGDIR 253

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} Length = 318

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  141 bits (355), Expect = 9e-38
 Identities = 73/299 (24%), Positives = 124/299 (41%), Gaps = 36/299 (12%)

Query: 366 FSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHEN--DGGTRAFLAEISSLGRLKHKSL 423
           + +   IG G  G+V+K      G ++A+K++  EN  +G     L EI  L  LKH+++
Sbjct: 12  YEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENV 71

Query: 424 VGLRGWCK-------REKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAA 476
           V L   C+       R KGS+ LV+D+ E+             +  +  E  RV++ +  
Sbjct: 72  VNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNV---LVKFTLSEIKRVMQMLLN 128

Query: 477 GVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVA---STTRVVGTV 533
           G   L+     K+LHRD+K++NVL+ ++   +L DFGLAR     + +     T  V T+
Sbjct: 129 G---LYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYTNRVVTL 185

Query: 534 GYLAPEVFSSGRA-STQTDVFGFGILILEVLSGRRP------------IEEGKPNLVEMV 580
            Y  PE+    R      D++G G ++ E+ +                I +   ++   V
Sbjct: 186 WYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEV 245

Query: 581 WELMVQGKLLDALDARLRAKGGFDEDEVERVLHLGLL-----CAYPDPRARPTMRQVVK 634
           W  +   +L + L+     K    +     V     L         DP  R      + 
Sbjct: 246 WPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALN 304

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  140 bits (353), Expect = 1e-37
 Identities = 75/284 (26%), Positives = 113/284 (39%), Gaps = 27/284 (9%)

Query: 370 NVIGVGGNGKVYKGVLEGGGAEIAVKRI-----SHENDGGTRAFLAEISSLGRLKHKSLV 424
           + +G G    VYK   +     +A+K+I     S   DG  R  L EI  L  L H +++
Sbjct: 4   DFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNII 63

Query: 425 GLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEG 484
           GL       K ++ LV+D+ME           D S++L+       +     G+ YLH+ 
Sbjct: 64  GLLDAF-GHKSNISLVFDFMETDLEV---IIKDNSLVLTPSHIKAYMLMTLQGLEYLHQH 119

Query: 485 WEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSG 544
           W   +LHRD+K +N+LLD+    +L DFGLA+  G     + T  V T  Y APE+    
Sbjct: 120 W---ILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPN-RAYTHQVVTRWYRAPELLFGA 175

Query: 545 RA-STQTDVFGFGILILEVLSGRRP------------IEEGKPNLVEMVWELMVQGKLLD 591
           R      D++  G ++ E+L                 I E      E  W  M       
Sbjct: 176 RMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDYV 235

Query: 592 ALDARLRAKGGFDEDEV-ERVLHLGLLCAYPDPRARPTMRQVVK 634
              +              + +L L       +P AR T  Q +K
Sbjct: 236 TFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALK 279

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} Length = 335

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  138 bits (349), Expect = 9e-37
 Identities = 53/273 (19%), Positives = 99/273 (36%), Gaps = 25/273 (9%)

Query: 369 ENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRL-KHKSLVGLR 427
             V+G+G NGKV +   +    + A+K +             E+    R  +   +V + 
Sbjct: 17  SQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPK-----ARREVELHWRASQCPHIVRIV 71

Query: 428 GWCK---REKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEG 484
              +     +  L++V + ++ G L   I    G    +  E   ++K +   + YLH  
Sbjct: 72  DVYENLYAGRKCLLIVMECLDGGELFSRIQDR-GDQAFTEREASEIMKSIGEAIQYLHS- 129

Query: 485 WEKKVLHRDIKSSNVLLDKEMNG---RLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVF 541
               + HRD+K  N+L   +      +L DFG A+        +T     T  Y+APEV 
Sbjct: 130 --INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCY--TPYYVAPEVL 185

Query: 542 SSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRAKG 601
              +     D++  G+++  +L G  P           +   M     +   +       
Sbjct: 186 GPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHG---LAISPGMKTRIRMGQYEFPNPEWS 242

Query: 602 GFDEDEVERVLHLGLLCAYPDPRARPTMRQVVK 634
              E+    V  L       +P  R T+ + + 
Sbjct: 243 EVSEE----VKMLIRNLLKTEPTQRMTITEFMN 271

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} Length = 345

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  138 bits (349), Expect = 1e-36
 Identities = 64/289 (22%), Positives = 113/289 (39%), Gaps = 24/289 (8%)

Query: 366 FSEENVIGVGGNGKVYKGVLEGGGAEIAVKRIS-HENDGGTRAFLAEISSLGRLKHKSLV 424
           ++  + IG G  G V           +A+K+IS  E+    +  L EI  L R +H++++
Sbjct: 10  YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 69

Query: 425 GLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEG 484
           G+     R      +   Y+    +   +++   +  LS +     L  +  G+ Y+H  
Sbjct: 70  GINDII-RAPTIEQMKDVYLVTHLMGADLYKLLKTQHLSNDHICYFLYQILRGLKYIHS- 127

Query: 485 WEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARM--HGHGQVASTTRVVGTVGYLAPEVFS 542
               VLHRD+K SN+LL+   + ++ DFGLAR+    H      T  V T  Y APE+  
Sbjct: 128 --ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 185

Query: 543 SGRAST-QTDVFGFGILILEVLSGRRP------------IEEGKPNLVEMVWELMVQGKL 589
           + +  T   D++  G ++ E+LS R              I     +  +     ++  K 
Sbjct: 186 NSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKA 245

Query: 590 LDALDARLRAKGGFDEDEVERV----LHLGLLCAYPDPRARPTMRQVVK 634
            + L +                    L L       +P  R  + Q + 
Sbjct: 246 RNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALA 294

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  136 bits (344), Expect = 2e-36
 Identities = 51/303 (16%), Positives = 99/303 (32%), Gaps = 24/303 (7%)

Query: 369 ENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRG 428
              IG G  G +Y G     G E+A+K    +          E      ++    +    
Sbjct: 12  GRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK--HPQLHIESKIYKMMQGGVGIPTIR 69

Query: 429 WCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKK 488
           WC  E    ++V + +     D + F    S   S +  + +   + + + Y+H    K 
Sbjct: 70  WCGAEGDYNVMVMELLGPSLEDLFNFC---SRKFSLKTVLLLADQMISRIEYIHS---KN 123

Query: 489 VLHRDIKSSNVLLDKEMNGRL---GDFGLARMHGHGQVAS------TTRVVGTVGYLAPE 539
            +HRD+K  N L+     G L    DFGLA+ +   +            + GT  Y +  
Sbjct: 124 FIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASIN 183

Query: 540 VFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRA 599
                  S + D+   G +++    G  P +  K       +E + + K+   ++     
Sbjct: 184 THLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEV---- 239

Query: 600 KGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLEGKIEAGIENETEDMDAYLLQQV 659
                +            C       +P    + ++          +     D  +L+  
Sbjct: 240 ---LCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDWNMLKFG 296

Query: 660 KSK 662
            S+
Sbjct: 297 ASR 299

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} Length = 298

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  136 bits (343), Expect = 2e-36
 Identities = 62/285 (21%), Positives = 101/285 (35%), Gaps = 22/285 (7%)

Query: 366 FSEENVIGVGGNGKVYKGVLEGGGAEIAVKRI--SHENDGGTRAFLAEISSLGRLKHKSL 423
           F +   IG G  G VYK   +  G  +A+K+I    E +G     + EIS L  L H ++
Sbjct: 4   FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 63

Query: 424 VGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHE 483
           V L       +  L LV++++                 +        L  +  G+ +   
Sbjct: 64  VKLLDVI-HTENKLYLVFEFLHQDLKKFMDASALTG--IPLPLIKSYLFQLLQGLAFC-- 118

Query: 484 GWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSS 543
               +VLHRD+K  N+L++ E   +L DFGLAR  G      T  VV         +   
Sbjct: 119 -HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGC 177

Query: 544 GRASTQTDVFGFGILILEVLSGRRP------------IEEGKPNLVEMVWELMVQGKLLD 591
              ST  D++  G +  E+++ R              I        E+VW  +       
Sbjct: 178 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYK 237

Query: 592 ALDARLRAKGGFD--EDEVERVLHLGLLCAYPDPRARPTMRQVVK 634
               +   +          E    L     + DP  R + +  + 
Sbjct: 238 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 282

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  136 bits (342), Expect = 3e-36
 Identities = 61/288 (21%), Positives = 113/288 (39%), Gaps = 39/288 (13%)

Query: 366 FSEENV---------IGVGGNGKVYKGVLEGGGAEIAVKRI------SHENDGGTRAFLA 410
           F +ENV         +G G    V K   +  G + A K I      S            
Sbjct: 3   FRQENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIER 62

Query: 411 EISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRV 470
           E+S L  ++H +++ L       K  ++L+ + +  G L  ++ + +    L+ EE    
Sbjct: 63  EVSILKEIQHPNVITLHEVY-ENKTDVILILELVAGGELFDFLAEKES---LTEEEATEF 118

Query: 471 LKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGR----LGDFGLARMHGHGQVAST 526
           LK +  G   ++     ++ H D+K  N++L      +    + DFGLA     G     
Sbjct: 119 LKQILNG---VYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGN--EF 173

Query: 527 TRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQ 586
             + GT  ++APE+ +      + D++  G++   +LSG  P   G      +     V 
Sbjct: 174 KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF-LGDTKQETLANVSAVN 232

Query: 587 GKLLDALDARLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVK 634
            +  D   +   A     +D + R+L         DP+ R T++  ++
Sbjct: 233 YEFEDEYFSNTSALA---KDFIRRLLV-------KDPKKRMTIQDSLQ 270

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 316

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score =  136 bits (344), Expect = 3e-36
 Identities = 63/269 (23%), Positives = 98/269 (36%), Gaps = 29/269 (10%)

Query: 366 FSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHE---NDGGTRAFLAEISSLGRLKHKS 422
           F     +G G  G+V+       G   A+K +  E             E   L  + H  
Sbjct: 6   FQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPF 65

Query: 423 LVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLH 482
           ++ + G   ++   + ++ DY+E G L         S             +V    L L 
Sbjct: 66  IIRMWGTF-QDAQQIFMIMDYIEGGELFSL---LRKSQRFPNPVAKFYAAEVC---LALE 118

Query: 483 EGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFS 542
               K +++RD+K  N+LLDK  + ++ DFG A+         T  + GT  Y+APEV S
Sbjct: 119 YLHSKDIIYRDLKPENILLDKNGHIKITDFGFAKYVPD----VTYTLCGTPDYIAPEVVS 174

Query: 543 SGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRAKGG 602
           +   +   D + FGILI E+L+G  P  +                      +  L A+  
Sbjct: 175 TKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTM---------------KTYEKILNAELR 219

Query: 603 FDEDEVERVLHLGLLCAYPDPRARPTMRQ 631
           F     E V  L       D   R    Q
Sbjct: 220 FPPFFNEDVKDLLSRLITRDLSQRLGNLQ 248

>d1nlsa_ b.29.1.1 (A:) Concanavalin A {Jack bean (Canavalia ensiformis) [TaxId: 3823]} Length = 237

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Concanavalin A
species: Jack bean (Canavalia ensiformis) [TaxId: 3823]

 Score =  134 bits (338), Expect = 3e-36
 Identities = 32/144 (22%), Positives = 55/144 (38%), Gaps = 30/144 (20%)

Query: 134 SNHVFGVEFDVFKNQEFNDIDENHVGIDVNSLTSVSAHAAGYWPDNQTDSSGSNSNSGTG 193
           ++ +  VE D + N +  D    H+GID+ S+ S                          
Sbjct: 1   ADTIVAVELDTYPNTDIGDPSYPHIGIDIKSVRSKKT----------------------- 37

Query: 194 DDEKSFKELKLNNGKNYQVWIDYADSFINITMVEAGMKRPKRPLLSVPLNLSGVLEDEMY 253
                  +  + NGK     I Y +S                  +S  ++L  VL + + 
Sbjct: 38  ------AKWNMQNGKVGTAHIIY-NSVDKRLSAVVSYPNADSATVSYDVDLDNVLPEWVR 90

Query: 254 VGFTAATGQLVESHKILAWSFSNT 277
           VG +A+TG   E++ IL+WSF++ 
Sbjct: 91  VGLSASTGLYKETNTILSWSFTSK 114

>d1nlsa_ b.29.1.1 (A:) Concanavalin A {Jack bean (Canavalia ensiformis) [TaxId: 3823]} Length = 237

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Concanavalin A
species: Jack bean (Canavalia ensiformis) [TaxId: 3823]

 Score = 85.0 bits (210), Expect = 3e-19
 Identities = 28/134 (20%), Positives = 47/134 (35%), Gaps = 19/134 (14%)

Query: 13  LLSIFLSFESISAVDFV---------FNGFNSSNLSLYGTATVESR-ILTLTNST----- 57
           +LS   + +  S                  +  +L L G AT  +   L LT  +     
Sbjct: 106 ILSWSFTSKLKSNSTHETNALHFMFNQFSKDQKDLILQGDATTGTDGNLELTRVSSNGSP 165

Query: 58  -TFTIGRALYPSKIPTKRPNSSYVYPFSTSFIFAMAPYKGVLAGHGLVFLFVPFH-GIKG 115
              ++GRAL+ + +     +S+ V  F  +F F +          G+ F        I  
Sbjct: 166 QGSSVGRALFYAPVHI-WESSAVVASFEATFTFLIKS-PDSHPADGIAFFISNIDSSIPS 223

Query: 116 ATEAQHLGLFNRTN 129
            +  + LGLF   N
Sbjct: 224 GSTGRLLGLFPDAN 237

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  136 bits (343), Expect = 7e-36
 Identities = 62/290 (21%), Positives = 111/290 (38%), Gaps = 30/290 (10%)

Query: 366 FSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVG 425
           +++  VIG G  G VY+  L   G  +A+K++  +     R    E+  + +L H ++V 
Sbjct: 22  YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK----RFKNRELQIMRKLDHCNIVR 77

Query: 426 LRGWC-----KREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLY 480
           LR +      K+++  L LV DY+                 L        +  +   + Y
Sbjct: 78  LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 137

Query: 481 LHEGWEKKVLHRDIKSSNVLLDKE-MNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAP- 538
           +H      + HRDIK  N+LLD +    +L DFG A+    G+   +   + +  Y AP 
Sbjct: 138 IH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSY--ICSRYYRAPE 192

Query: 539 EVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPN--LVEMVWELMVQGKLLDALDAR 596
            +F +   ++  DV+  G ++ E+L G+           LVE++  L    +        
Sbjct: 193 LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNP 252

Query: 597 LRAKGGFDEDEVERVLHLGLLCAYP------------DPRARPTMRQVVK 634
              +  F + +      +      P             P AR T  +   
Sbjct: 253 NYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACA 302

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} Length = 305

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  133 bits (334), Expect = 5e-35
 Identities = 66/287 (22%), Positives = 113/287 (39%), Gaps = 29/287 (10%)

Query: 370 NVIGVGGNGKVYKGV-LEGGGAEIAVKRISHE--NDGGTRAFLAEI---SSLGRLKHKSL 423
             IG G  GKV+K   L+ GG  +A+KR+  +   +G   + + E+     L   +H ++
Sbjct: 13  AEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNV 72

Query: 424 VGLRGWCK----REKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVL 479
           V L   C       +  L LV+++++           +    +  E    ++  +  G+ 
Sbjct: 73  VRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPG--VPTETIKDMMFQLLRGLD 130

Query: 480 YLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPE 539
           +LH     +V+HRD+K  N+L+      +L DFGLAR++      + T VV T+ Y APE
Sbjct: 131 FLHS---HRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQM--ALTSVVVTLWYRAPE 185

Query: 540 VFSSGRASTQTDVFGFGILILEVLSGRRP------------IEEGKPNLVEMVWELMVQG 587
           V      +T  D++  G +  E+   +              I +      E  W   V  
Sbjct: 186 VLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVAL 245

Query: 588 KLLDALDARLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVK 634
                     +    F  D  E    L L C   +P  R +    + 
Sbjct: 246 PRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS 292

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  131 bits (330), Expect = 8e-35
 Identities = 58/274 (21%), Positives = 93/274 (33%), Gaps = 40/274 (14%)

Query: 371 VIGVGGNGKVYKGVLEGGGAEIAVKRIS------HENDGGTRAFLAEISSLGRLK--HKS 422
           ++G GG G VY G+       +A+K +                   E+  L ++      
Sbjct: 11  LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 70

Query: 423 LVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLH 482
           ++ L  W      S +L+ +  E            G+  L  E        V   V +  
Sbjct: 71  VIRLLDWF-ERPDSFVLILERPEPVQDLFDFITERGA--LQEELARSFFWQVLEAVRHC- 126

Query: 483 EGWEKKVLHRDIKSSNVLLDKE-MNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVF 541
                 VLHRDIK  N+L+D      +L DFG   +         T   GT  Y  PE  
Sbjct: 127 --HNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV---YTDFDGTRVYSPPEWI 181

Query: 542 SSGRASTQ-TDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRAK 600
              R   +   V+  GIL+ +++ G  P E  +          +++G++           
Sbjct: 182 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE---------IIRGQVF---------- 222

Query: 601 GGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVK 634
             F +       HL   C    P  RPT  ++  
Sbjct: 223 --FRQRVSSECQHLIRWCLALRPSDRPTFEEIQN 254

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

 Score =  130 bits (327), Expect = 3e-34
 Identities = 52/280 (18%), Positives = 94/280 (33%), Gaps = 26/280 (9%)

Query: 369 ENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRG 428
              IG G  G +++G       ++A+K     +D        E  +   L   + +    
Sbjct: 10  GRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSD--APQLRDEYRTYKLLAGCTGIPNVY 67

Query: 429 WCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKK 488
           +  +E    +LV D +     D            S +      K + A V  +HE   K 
Sbjct: 68  YFGQEGLHNVLVIDLLGPSLEDLLDLC---GRKFSVKTVAMAAKQMLARVQSIHE---KS 121

Query: 489 VLHRDIKSSNVLLDKEMNG-----RLGDFGLARM------HGHGQVASTTRVVGTVGYLA 537
           +++RDIK  N L+ +  +       + DFG+ +         H        + GT  Y++
Sbjct: 122 LVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTKQHIPYREKKNLSGTARYMS 181

Query: 538 PEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDARL 597
                    S + D+   G + +  L G  P +  K    +  +E + + K    L    
Sbjct: 182 INTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQSTPLRELC 241

Query: 598 RAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLE 637
               GF E E  + +H           A P    +  +  
Sbjct: 242 ---AGFPE-EFYKYMH---YARNLAFDATPDYDYLQGLFS 274

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} Length = 286

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

 Score =  129 bits (325), Expect = 5e-34
 Identities = 71/281 (25%), Positives = 114/281 (40%), Gaps = 24/281 (8%)

Query: 370 NVIGVGGNGKVYKGVLEGGGAEIAVKRI--SHENDGGTRAFLAEISSLGRLKHKSLVGLR 427
             IG G  G VYK     G    A+K+I    E++G     + EIS L  LKH ++V L 
Sbjct: 8   EKIGEGTYGVVYKAQNNYG-ETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLY 66

Query: 428 GWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEK 487
                 K  L+LV++++ +  L K +  C+G   L        L  +  G+ Y H+   +
Sbjct: 67  DVI-HTKKRLVLVFEHL-DQDLKKLLDVCEGG--LESVTAKSFLLQLLNGIAYCHD---R 119

Query: 488 KVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRAS 547
           +VLHRD+K  N+L+++E   ++ DFGLAR  G      T  +V         +  S + S
Sbjct: 120 RVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEIVTLWYRAPDVLMGSKKYS 179

Query: 548 TQTDVFGFGILILEVLSGRRP------------IEEGKPNLVEMVWELMVQGKLLDALDA 595
           T  D++  G +  E+++G               I           W  + +    D    
Sbjct: 180 TTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNFT 239

Query: 596 RLRAKGG--FDEDEVERVLHLGLLCAYPDPRARPTMRQVVK 634
                    F +   E  + L       DP  R T +Q ++
Sbjct: 240 VYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALE 280

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  127 bits (321), Expect = 5e-33
 Identities = 52/206 (25%), Positives = 87/206 (42%), Gaps = 11/206 (5%)

Query: 366 FSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHE---NDGGTRAFLAEISSLGRLKHKS 422
           F    ++G G  GKV     +  G   A+K +  E           + E   L   +H  
Sbjct: 7   FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPF 66

Query: 423 LVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLH 482
           L  L+ +  +    L  V +Y   G L   + +     + + E       ++ +    L 
Sbjct: 67  LTALK-YAFQTHDRLCFVMEYANGGELFFHLSRE---RVFTEERARFYGAEIVSA---LE 119

Query: 483 EGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFS 542
               + V++RDIK  N++LDK+ + ++ DFGL +  G    A+     GT  YLAPEV  
Sbjct: 120 YLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCK-EGISDGATMKTFCGTPEYLAPEVLE 178

Query: 543 SGRASTQTDVFGFGILILEVLSGRRP 568
                   D +G G+++ E++ GR P
Sbjct: 179 DNDYGRAVDWWGLGVVMYEMMCGRLP 204

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} Length = 292

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  126 bits (317), Expect = 6e-33
 Identities = 60/286 (20%), Positives = 113/286 (39%), Gaps = 24/286 (8%)

Query: 366 FSEENVIGVGGNGKVYKGVLEGGGAEIAVKRI--SHENDGGTRAFLAEISSLGRLKHKSL 423
           + +   IG G  G V+K         +A+KR+    +++G   + L EI  L  LKHK++
Sbjct: 4   YEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNI 63

Query: 424 VGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHE 483
           V L          L LV+++ +      +   C+G +     +       +   +  L  
Sbjct: 64  VRLHDVL-HSDKKLTLVFEFCDQDLKKYF-DSCNGDLDPEIVKSF-----LFQLLKGLGF 116

Query: 484 GWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSS 543
              + VLHRD+K  N+L+++    +L +FGLAR  G      +  VV         +F +
Sbjct: 117 CHSRNVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGA 176

Query: 544 GRASTQTDVFGFGILILEVLSGRRPIEEGKPN--LVEMVWELMVQ---------GKLLDA 592
              ST  D++  G +  E+ +  RP+  G      ++ ++ L+            KL D 
Sbjct: 177 KLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDY 236

Query: 593 LDARLRAKGGFDEDEVERV----LHLGLLCAYPDPRARPTMRQVVK 634
               +        + V ++      L       +P  R +  + ++
Sbjct: 237 KPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQ 282

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

 Score =  120 bits (302), Expect = 2e-30
 Identities = 49/221 (22%), Positives = 87/221 (39%), Gaps = 15/221 (6%)

Query: 366 FSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHE---NDGGTRAFLAEISSLGRLKHKS 422
           F     +G G  G+V     +  G   A+K +  +           L E   L  +    
Sbjct: 43  FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102

Query: 423 LVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLH 482
           LV L     ++  +L +V +Y+  G +   + +       S          +     YLH
Sbjct: 103 LVKLEFSF-KDNSNLYMVMEYVAGGEMFSHLRRIGR---FSEPHARFYAAQIVLTFEYLH 158

Query: 483 EGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFS 542
                 +++RD+K  N+L+D++   ++ DFG A+         T  + GT   LAPE+  
Sbjct: 159 S---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG----RTWTLCGTPEALAPEIIL 211

Query: 543 SGRASTQTDVFGFGILILEVLSGRRPIEEGKP-NLVEMVWE 582
           S   +   D +  G+LI E+ +G  P    +P  + E +  
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS 252

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} Length = 328

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

 Score =  118 bits (297), Expect = 6e-30
 Identities = 50/253 (19%), Positives = 100/253 (39%), Gaps = 29/253 (11%)

Query: 332 KQRRAREREEMEDWELEYWPHRITYQEIEAATKGFSEENVIGVGGNGKVYKGVLEGGGAE 391
              R RE  + E   +E W ++  YQ +            +G G   +V++ +      +
Sbjct: 14  NTHRPREYWDYESHVVE-WGNQDDYQLVR----------KLGRGKYSEVFEAINITNNEK 62

Query: 392 IAVKRISHENDGGTRAFLAEISSLGRLK-HKSLVGLRGWCK-REKGSLMLVYDYMENGSL 449
           + VK +        +    EI  L  L+   +++ L    K     +  LV++++ N   
Sbjct: 63  VVVKILKPVKK---KKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTDF 119

Query: 450 DKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKE-MNGR 508
            +          L+  +    + ++   + Y H      ++HRD+K  NV++D E    R
Sbjct: 120 KQLY------QTLTDYDIRFYMYEILKALDYCH---SMGIMHRDVKPHNVMIDHEHRKLR 170

Query: 509 LGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRA-STQTDVFGFGILILEVLSGRR 567
           L D+GLA  +  GQ       V +  +  PE+    +      D++  G ++  ++  + 
Sbjct: 171 LIDWGLAEFYHPGQ--EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKE 228

Query: 568 PIEEGKPNLVEMV 580
           P   G  N  ++V
Sbjct: 229 PFFHGHDNYDQLV 241

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} Length = 346

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  117 bits (294), Expect = 2e-29
 Identities = 50/303 (16%), Positives = 112/303 (36%), Gaps = 30/303 (9%)

Query: 355 TYQEIEAATKGFSE----ENVIGVGGNGKVYKGVLEGGGAEIAVKRI--SHENDGGTRAF 408
             QE+                +G G  G V   V    GA++A+K++    +++   +  
Sbjct: 5   YRQEVTKTAWEVRAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRA 64

Query: 409 LAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERI 468
             E+  L  ++H++++GL      ++        Y+    +   + +      L  +   
Sbjct: 65  YRELRLLKHMRHENVIGLLDVFTPDETLDDFTDFYLVMPFMGTDLGKLMKHEKLGEDRIQ 124

Query: 469 RVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTR 528
            ++  +  G+ Y+H      ++HRD+K  N+ ++++   ++ DFGLAR          T 
Sbjct: 125 FLVYQMLKGLRYIH---AAGIIHRDLKPGNLAVNEDCELKILDFGLARQADS----EMTG 177

Query: 529 VVGTVGYLAPEV-FSSGRASTQTDVFGFGILILEVLSGRRP------------IEEGKPN 575
            V T  Y APEV  +  R +   D++  G ++ E+++G+              I +    
Sbjct: 178 YVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGT 237

Query: 576 LVEMVWELMVQGKLLDALDARLRAKGGFDEDEVERV----LHLGLLCAYPDPRARPTMRQ 631
                 + +   +  + +      +       +       ++L       D   R T  +
Sbjct: 238 PPAEFVQRLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGE 297

Query: 632 VVK 634
            + 
Sbjct: 298 ALA 300

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} Length = 355

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  116 bits (291), Expect = 6e-29
 Identities = 47/228 (20%), Positives = 90/228 (39%), Gaps = 19/228 (8%)

Query: 348 EYWPHRITYQEIEAATKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRIS--HENDGGT 405
           +++   +         + +     IG G  G V           +A+K++S   +N    
Sbjct: 2   QFYSVEVGDSTFTVLKR-YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHA 60

Query: 406 RAFLAEISSLGRLKHKSLVGLRGWCK-----REKGSLMLVYDYMENGSLDKWIFQCDGSM 460
           +    E+  +  + HK+++ L           E   + LV + M+         + D   
Sbjct: 61  KRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDH-- 118

Query: 461 MLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGH 520
               E    +L  +  G+ +LH      ++HRD+K SN+++  +   ++ DFGLAR  G 
Sbjct: 119 ----ERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGT 171

Query: 521 GQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRP 568
             +   T  V T  Y APEV          D++  G ++ E++  +  
Sbjct: 172 SFM--MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKIL 217

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  115 bits (288), Expect = 7e-29
 Identities = 66/321 (20%), Positives = 121/321 (37%), Gaps = 54/321 (16%)

Query: 326 LFLIKRKQRRAR-----EREEMEDWELEYWPHRITYQEIEAATKGFSEENVIGVGGNGKV 380
           L  +K + R A      E+  +E++EL                       V+G G  GKV
Sbjct: 2   LLTVKHELRTANLTGHAEKVGIENFELL---------------------KVLGTGAYGKV 40

Query: 381 YKGVLEGG---GAEIAVKRISH----ENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKRE 433
           +      G   G   A+K +      +    T     E   L  ++    +    +  + 
Sbjct: 41  FLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQT 100

Query: 434 KGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRD 493
           +  L L+ DY+  G L   + Q       +  E    + ++      L    +  +++RD
Sbjct: 101 ETKLHLILDYINGGELFTHLSQR---ERFTEHEVQIYVGEIVLA---LEHLHKLGIIYRD 154

Query: 494 IKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRA--STQTD 551
           IK  N+LLD   +  L DFGL++     +        GT+ Y+AP++   G +      D
Sbjct: 155 IKLENILLDSNGHVVLTDFGLSKEFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVD 214

Query: 552 VFGFGILILEVLSGRRP-IEEGKPNLVEMVWELMVQGKLLDALDARLRAKGGFDEDEVER 610
            +  G+L+ E+L+G  P   +G+ N    +   +++ +     +    AK     D ++R
Sbjct: 215 WWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEPPYPQEMSALAK-----DLIQR 269

Query: 611 VLHLGLLCAYPDPRARPTMRQ 631
           +L         DP+ R     
Sbjct: 270 LLM-------KDPKKRLGCGP 283

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} Length = 348

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  111 bits (277), Expect = 3e-27
 Identities = 50/304 (16%), Positives = 105/304 (34%), Gaps = 32/304 (10%)

Query: 355 TYQEIEAATKGFSEE----NVIGVGGNGKVYKGVLEGGGAEIAVKRIS--HENDGGTRAF 408
             QE+        E     + +G G  G V        G  +AVK++S   ++    +  
Sbjct: 5   YRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT 64

Query: 409 LAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERI 468
             E+  L  +KH++++GL       +        Y+    +   +        L+ +   
Sbjct: 65  YRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQ 124

Query: 469 RVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVASTTR 528
            ++  +  G+ Y+H      ++HRD+K SN+ ++++   ++ DFGLAR         T  
Sbjct: 125 FLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM---TGY 178

Query: 529 VVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRP------------IEEGKPNL 576
           V          + +    +   D++  G ++ E+L+GR              I       
Sbjct: 179 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 238

Query: 577 VEMVWELMVQGKLLDALDARLRAKGGFDEDEVERV------LHLGLLCAYPDPRARPTMR 630
              + + +      + + +  +       +           L   +L    D   R T  
Sbjct: 239 GAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLV--LDSDKRITAA 296

Query: 631 QVVK 634
           Q + 
Sbjct: 297 QALA 300

>d1gv9a_ b.29.1.13 (A:) Carbohydrate-recognition domain of P58/ERGIC-53 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 228

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Lectin leg-like
domain: Carbohydrate-recognition domain of P58/ERGIC-53
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  102 bits (254), Expect = 4e-25
 Identities = 42/267 (15%), Positives = 78/267 (29%), Gaps = 44/267 (16%)

Query: 18  LSFE-SISAVDFVFNGFNSSNLSLYGTATVESRILTLTNSTTFTIGRALYPSKIPTKRPN 76
             ++ S      V +       +  G A   +  + +  S     G     +K   +   
Sbjct: 5   FEYKYSFKGPHLVQSDGTVPFWAHAGNAIPSADQIRIAPSLKSQRGSVWTKTKAAFEN-- 62

Query: 77  SSYVYPFSTSFIFAMAPYKGVLAGHGLVFLFVPFHGIKGATEAQHLGLFNRTNDGNSSNH 136
                 +     F +   +G +   GL   +    G+ G       G            +
Sbjct: 63  ------WEVEVTFRVTG-RGRIGADGLAIWYTENQGLDG----PVFG-------SADMWN 104

Query: 137 VFGVEFDVFKNQEFNDIDENHVGIDVNSLTSVSAHAAGYWPDNQTDSSGSNSNSGTGDDE 196
             G+ FD F N      +   + +  N+      H                 N G     
Sbjct: 105 GVGIFFDSFDN--DGKKNNPAIVVVGNNGQINYDH----------------QNDGATQAL 146

Query: 197 KSFKELKLNNGKNYQVWIDYADSFINITMVEAGMKRPKRPLLSVPLNLSGVLEDEMYVGF 256
            S +    N     +  I Y    + + M+  G    K          + V+  + + G 
Sbjct: 147 ASCQRDFRNKPYPVRAKITYYQKTLTV-MINNGFTPDKNDYEFCAKVENMVIPTQGHFGI 205

Query: 257 TAATGQLVESHKILAWSFSNTKFSLSE 283
           +AATG L + H +L++      F L+E
Sbjct: 206 SAATGGLADDHDVLSFLT----FQLTE 228

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 362

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score =  100 bits (248), Expect = 2e-23
 Identities = 53/313 (16%), Positives = 91/313 (29%), Gaps = 50/313 (15%)

Query: 369 ENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRG 428
              +G G    V+          +A+K +   +   T A   EI  L R+          
Sbjct: 18  VRKLGWGHFSTVWLAKDMVNNTHVAMKIV-RGDKVYTEAAEDEIKLLQRVNDADNTKEDS 76

Query: 429 WCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSC------------EERIRVLKDVAA 476
                   L+  +++     +   +        L                  ++ K +  
Sbjct: 77  MGANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLL 136

Query: 477 GVLYLHEGWEKKVLHRDIKSSNVLLDKE-MNGRLGDFGLARMHGHGQVASTTRVV-GTVG 534
           G+ Y+H      ++H DIK  NVL++       L    +A +               T  
Sbjct: 137 GLDYMH--RRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDEHYTNSIQTRE 194

Query: 535 YLAPEVFSSGRASTQTDVFGFGILILEVLSGRRP---------------IEEGKPNLVEM 579
           Y +PEV          D++    LI E+++G                  I +    L E+
Sbjct: 195 YRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIELLGEL 254

Query: 580 VWELMVQGKLLDA------------------LDARLRAKGGFDEDEVERVLHLGLLCAYP 621
              L+  GK                      L+  L  K  F +DE + +          
Sbjct: 255 PSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQL 314

Query: 622 DPRARPTMRQVVK 634
           DPR R     +V 
Sbjct: 315 DPRKRADAGGLVN 327

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]} Length = 191

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

 Score = 77.9 bits (191), Expect = 4e-17
 Identities = 32/161 (19%), Positives = 55/161 (34%), Gaps = 22/161 (13%)

Query: 370 NVIGVGGNGKVYKGVLEGGGAEIAVK----------RISHENDGGTRAFLAEISSLGRLK 419
            ++G G    V+    E  G E  VK          ++  + D G   F        R +
Sbjct: 6   KLMGEGKESAVFNCYSEKFG-ECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNE 64

Query: 420 HKSLVGLRGWCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVL 479
            ++L  L+G        +  VY +  N  L + I   +   +        VL  +   V 
Sbjct: 65  FRALQKLQGLA------VPKVYAWEGNAVLMELIDAKELYRVRVENPD-EVLDMILEEVA 117

Query: 480 YLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGH 520
             +      ++H D+   NVL+  E    + DF  +   G 
Sbjct: 118 KFYHRG---IVHGDLSQYNVLVS-EEGIWIIDFPQSVEVGE 154

>d2a6va1 b.29.1.13 (A:9-226) Emp46p N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 218

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Lectin leg-like
domain: Emp46p N-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 50.8 bits (121), Expect = 1e-07
 Identities = 25/251 (9%), Positives = 54/251 (21%), Gaps = 48/251 (19%)

Query: 26  VDFVFNGFNSSNLSLYGTATVESRILTLTNSTTFTIGRALYPSKIPTKRPNSSYVYPFST 85
           ++        S  +L     +E     LT     T G      +   K   +      S 
Sbjct: 12  LEVTDQQKELSQWTLGDKVKLEEGRFVLTPGKN-TKGSLWLKPEYSIKDAMTIEWTFRSF 70

Query: 86  SFIFAMAPYKGVLAGHGLVFLFVPFHGIKGATEAQHLGLFNRTNDGNSSNHVFGVEFDVF 145
                           GL F     +                +   N       +   + 
Sbjct: 71  G--------FRGSTKGGLAFWLKQGNEGDSTE-----LFGGSSKKFNG----LMILLRLD 113

Query: 146 KNQEFNDIDENHVGIDVNSLTSVSAHAAGYWPDNQTDSSGSNSNSGTGDDEKSFKELKLN 205
                       V   +N  T           D ++    ++                 +
Sbjct: 114 DK------LGESVTAYLNDGTK--------DLDIESSPYFASCLFQ-----------YQD 148

Query: 206 NGKNYQVWIDYADSFINITMVEAGMKRPKRPLLSVPLNLSGVLEDEMYVGFTAATGQLVE 265
           +     + + Y     ++  ++       R        +  +      +G +A      E
Sbjct: 149 SMVPSTLRLTYNPLDNHLLKLQM----DNRVCFQTR-KVKFMGSSPFRIGTSAINDASKE 203

Query: 266 SHKILAWSFSN 276
           S +IL     +
Sbjct: 204 SFEILKMKLYD 214

>d2a6za1 b.29.1.13 (A:7-227) Emp47p N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 221

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Lectin leg-like
domain: Emp47p N-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 42.3 bits (99), Expect = 8e-05
 Identities = 29/252 (11%), Positives = 61/252 (24%), Gaps = 53/252 (21%)

Query: 35  SSNLSLYGTATVESRILTLTNSTTFTIGRALYPSKIPTKRPNSSYVYPFSTSFIFAMAPY 94
            +N      A++E   + LT++   + G          K         F+  + F    Y
Sbjct: 22  PNNWQTGEQASLEEGRIVLTSNQN-SKGSLWLKQGFDLKDS-------FTMEWTFRSVGY 73

Query: 95  KGVLAGHGLVFLFVPFHGIKGATEAQHLGLFNRTNDGNSSNHVFGVEFDVFKNQEFNDID 154
            G     G+ F FV    I    +           +G  +     +  D           
Sbjct: 74  SG-QTDGGISFWFVQDSNIPRDKQ---------LYNGPVNYDGLQLLVDNNGP------L 117

Query: 155 ENHVGIDVNSLTSVSAHAAGYWPDNQTDSSGSNSNSGTGDDEKSFKELKLNNGKNYQVWI 214
              +   +N                +        +         +     ++     + +
Sbjct: 118 GPTLRGQLN-------------DGQKPVDKTKIYDQSFASCLMGY----QDSSVPSTIRV 160

Query: 215 DYADSFINITMVE-AGMKRPKRPLLSVPLNLSGVLEDEMYVGFTAATGQLVESHKILAWS 273
            Y     N+  V+       +   +  P            +G TA  G +  + +     
Sbjct: 161 TYDLEDDNLLKVQVDNKVCFQTRKVRFPSG-------SYRIGVTAQNGAVNNNAES---- 209

Query: 274 FSNTKFSLSEEL 285
           F   K      +
Sbjct: 210 FEIFKMQFFNGV 221

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	705
d1hqla_	236	Legume lectin {Griffonia simplicifolia, lectin I-b	100.0
d1leda_	243	Legume lectin {West-central african legume (Griffo	100.0
d1fx5a_	240	Legume lectin {Furze (Ulex europaeus), UEA-I [TaxI	100.0
d1qnwa_	237	Legume lectin {Furze (Ulex europaeus), UEA-II [Tax	100.0
d1gzca_	239	Legume lectin {Cockspur coral tree (Erythrina cris	100.0
d1opja_	287	Abelsone tyrosine kinase (abl) {Mouse (Mus musculu	100.0
d1jpaa_	299	ephb2 receptor tyrosine kinase {Mouse (Mus musculu	100.0
d2d3sa1	237	Legume lectin {Winged bean (Psophocarpus tetragono	100.0
d1uwha_	276	B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}	100.0
d1sm2a_	263	Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie	100.0
d1g9fa_	251	Legume lectin {Soybean (Glycine max) [TaxId: 3847]	100.0
d1g7ya_	253	Legume lectin {Horse gram (Dolichos biflorus), dif	100.0
d1f9ka_	234	Legume lectin {Winged bean (Psophocarpus tetragono	100.0
d2j4za1	263	Aurora-related kinase 1 (aurora-2) {Human (Homo sa	100.0
d1g8wa_	233	Phytohemagglutinin-L, PHA-L, also arcelin {Kidney	100.0
d1qpca_	272	Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax	100.0
d1uu3a_	288	3-phosphoinositide dependent protein kinase-1 Pdk1	100.0
d2java1	269	Serine/threonine-protein kinase Nek2 {Human (Homo	100.0
d1yhwa1	293	pak1 {Human (Homo sapiens) [TaxId: 9606]}	100.0
d1dbna_	239	Legume lectin {Maackia amurensis, leukoagglutinin	100.0
d1nvra_	271	Cell cycle checkpoint kinase chk1 {Human (Homo sap	100.0
d1mqba_	283	epha2 receptor tyrosine kinase {Human (Homo sapien	100.0
d2jfla1	288	STE20-like serine/threonine-protein kinase, SLK {H	100.0
d1xbba_	277	Tyrosine-protein kinase SYK {Human (Homo sapiens)	100.0
d1v6ia_	232	Legume lectin {Peanut (Arachis hypogaea) [TaxId: 3	100.0
d1u59a_	285	Tyrosine-protein kinase ZAP-70 {Human (Homo sapien	100.0
d1k2pa_	258	Bruton's tyrosine kinase (Btk) {Human (Homo sapien	100.0
g1qmo.1	230	Legume lectin {Field bean (Dolichos lablab), Fril	100.0
d1s9ja_	322	Dual specificity mitogen-activated protein kinase	100.0
d1t4ha_	270	Protein kinase wnk1 {Human (Homo sapiens) [TaxId:	100.0
d1fnya_	237	Legume lectin {Black locust (Robinia pseudoacacia)	100.0
d1rjba_	325	Fl cytokine receptor {Human (Homo sapiens) [TaxId:	100.0
d1n47a_	233	Legume lectin {Hairy vetch (Vicia villosa), isolec	100.0
d1fota_	316	cAMP-dependent PK, catalytic subunit {Baker's yeas	100.0
d1lufa_	301	Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax	100.0
d1fmka3	285	c-src tyrosine kinase {Human (Homo sapiens) [TaxId	100.0
d1a06a_	307	Calmodulin-dependent protein kinase {Rat (Rattus n	100.0
d1koaa2	350	Twitchin, kinase domain {Caenorhabditis elegans, p	100.0
d1mp8a_	273	Focal adhesion kinase 1 (fak) {Human (Homo sapiens	100.0
d1u5ra_	309	Serine/threonine protein kinase TAO2 {Rat (Rattus	100.0
d1koba_	352	Twitchin, kinase domain {California sea hare (Aply	100.0
d1xkka_	317	EGF receptor tyrosine kinase, Erbb-1 {Human (Homo	100.0
d1ukga_	241	Legume lectin {Bloodwood tree (Pterocarpus angolen	100.0
d1jksa_	293	Death-associated protein kinase, Dap {Human (Homo	100.0
d1ywna1	299	Vascular endothelial growth factor receptor 2 (kdr	100.0
d1byga_	262	Carboxyl-terminal src kinase (csk) {Human (Homo sa	100.0
g2ltn.1	229	Legume lectin {Garden pea (Pisum sativum) [TaxId:	100.0
d1o6la_	337	Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9	100.0
d1r0pa_	311	Hepatocyte growth factor receptor, c-MET {Human (H	100.0
d1fvra_	309	Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}	100.0
d1o6ya_	277	Mycobacterial protein kinase PknB, catalytic domai	100.0
d1rdqe_	350	cAMP-dependent PK, catalytic subunit {Mouse (Mus m	100.0
d1u46a_	273	Activated CDC42 kinase 1, ACK1 {Human (Homo sapien	100.0
d1phka_	277	gamma-subunit of glycogen phosphorylase kinase (Ph	100.0
d1t46a_	311	c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]	100.0
d1omwa3	364	G-protein coupled receptor kinase 2 {Cow (Bos taur	100.0
d1p4oa_	308	Insulin-like growth factor 1 receptor {Human (Homo	100.0
d1xjda_	320	Protein kinase C, theta type {Human (Homo sapiens)	100.0
d1fgka_	299	Fibroblast growth factor receptor 1 {Human (Homo s	100.0
d1tkia_	321	Titin, kinase domain {Human (Homo sapiens) [TaxId:	100.0
d1vjya_	303	Type I TGF-beta receptor R4 {Human (Homo sapiens)	100.0
d2ozaa1	335	MAP kinase activated protein kinase 2, mapkap2 {Hu	100.0
d1ioaa_	228	Phytohemagglutinin-L, PHA-L, also arcelin {Kidney	100.0
d1ua2a_	299	Cell division protein kinase 7, CDK7 {Human (Homo	100.0
d1avba_	226	Phytohemagglutinin-L, PHA-L, also arcelin {Kidney	100.0
d1gz8a_	298	Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T	100.0
d1xwsa_	273	Proto-oncogene serine/threonine-protein kinase Pim	100.0
d1ckia_	299	Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax	100.0
d1blxa_	305	Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T	100.0
d1ob3a_	286	Cyclin-dependent PK, CDK2 {(Plasmodium falciparum)	100.0
d1dhkb_	204	Phytohemagglutinin-L, PHA-L, also arcelin {Kidney	100.0
d1q5ka_	350	Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho	100.0
d1csna_	293	Casein kinase-1, CK1 {Fission yeast (Schizosacchar	100.0
d3blha1	318	Cell division protein kinase 9, CDK9 {Human (Homo	100.0
d1cm8a_	346	MAP kinase p38-gamma {Human (Homo sapiens) [TaxId:	100.0
d1pmea_	345	MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606	100.0
d1unla_	292	Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T	100.0
d1vzoa_	322	Ribosomal protein S6 kinase alpha 5, Msk1 {Human (	100.0
d3bqca1	328	Protein kinase CK2, alpha subunit {Rattus norvegic	100.0
d2b1pa1	355	c-jun N-terminal kinase (jnk3s) {Human (Homo sapie	100.0
d2gfsa1	348	MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]	100.0
d1q8ya_	362	Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T	100.0
d1nlsa_	237	Concanavalin A {Jack bean (Canavalia ensiformis) [	99.95
d1gv9a_	228	Carbohydrate-recognition domain of P58/ERGIC-53 {R	99.94
d1nlsa_	237	Concanavalin A {Jack bean (Canavalia ensiformis) [	99.9
d1zara2	191	Rio2 serine protein kinase C-terminal domain {Arch	99.82
d2a6za1	221	Emp47p N-terminal domain {Baker's yeast (Saccharom	99.82
d2a6va1	218	Emp46p N-terminal domain {Baker's yeast (Saccharom	99.8
d1j7la_	263	Type IIIa 3',5"-aminoglycoside phosphotransferase	98.19
d1nd4a_	255	Aminoglycoside 3'-phosphotransferase IIa (Kanamyci	97.29
d2pula1	392	Methylthioribose kinase MtnK {Bacillus subtilis [T	97.24
d1zyla1	325	RdoA {Escherichia coli [TaxId: 562]}	95.89
d1nw1a_	395	Choline kinase {Caenorhabditis elegans [TaxId: 623	95.3
d2ppqa1	316	Homoserine kinase ThrB {Agrobacterium tumefaciens	94.62
d3bqca1	328	Protein kinase CK2, alpha subunit {Rattus norvegic	82.24
d1unla_	292	Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T	80.72

>d1hqla_ b.29.1.1 (A:) Legume lectin {Griffonia simplicifolia, lectin I-b4 [TaxId: 3850]}

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Legume lectin
species: Griffonia simplicifolia, lectin I-b4 [TaxId: 3850]

Probab=100.00  E-value=4.1e-54  Score=431.87  Aligned_cols=222  Identities=29%  Similarity=0.492  Sum_probs=195.0

Q ss_pred             eeeEEeCCCCC---CCeEEEcceEeecCcEEecCCC------CCeEEEEEcCCCccccCCCCCcccceEEEEEEEEecCC
Q 005257           25 AVDFVFNGFNS---SNLSLYGTATVESRILTLTNST------TFTIGRALYPSKIPTKRPNSSYVYPFSTSFIFAMAPYK   95 (705)
Q Consensus        25 ~~~f~f~~f~~---~~~~~~g~a~~~~~~l~lt~~~------~~~~Gr~~y~~pv~l~~~~~~~~~sF~t~F~f~i~~~~   95 (705)
                      +++|+|++|.+   .+|+|+|||++.++.|+||+..      ..++|||+|++||+||++.++++|||+|+|+|.|... 
T Consensus         1 ~~sF~f~~F~~~~~~~l~l~G~A~~~~~~l~LT~~~~~~~~~~~s~Gra~y~~Pv~l~~~~t~~~asFsT~F~F~i~~~-   79 (236)
T d1hqla_           1 SVSFTFPNFWSDVEDSIIFQGDANTTAGTLQLCKTNQYGTPLQWSAGRALYSDPVQLWDNKTESVASFYTEFTFFLKIT-   79 (236)
T ss_dssp             CCEEEESCSCSCGGGTEEEEETCEEETTEEECSCBCTTSCBCSSCEEEEEESSCEECCCSTTCCCCEEEEEEEEEEEEC-
T ss_pred             CEEEEeCCCCCCCcCCEEEeccEEecCCEEEEecCCCCCcccccceEEEEECCCEEeecCCCCceeEEEEEEEEEEeCC-
Confidence            47999999974   6899999999999999999864      3589999999999999999999999999999999875 


Q ss_pred             CCCCCCceEEEEeeCCCCCCCCCCCcccccccCCCC-CCCCcEEEEEeecccCCCCCCCCCCeeEEecCCCccccccccc
Q 005257           96 GVLAGHGLVFLFVPFHGIKGATEAQHLGLFNRTNDG-NSSNHVFGVEFDVFKNQEFNDIDENHVGIDVNSLTSVSAHAAG  174 (705)
Q Consensus        96 ~~~~g~G~aF~~~~~~~~~~~~~g~~lGl~~~~~~~-~~~~~~vaVEFDt~~n~~~~d~~~~Hvgidvns~~S~~~~~~~  174 (705)
                      ...+||||||||+|.... .+..|++||++|..+.+ ...+++|||||||++|.+++||++||||||+|+++|.++.+  
T Consensus        80 ~~~~gDGlAFvl~p~~~~-~~~~G~~lGl~~~~~~~~~~~~~~vAVEFDT~~n~~~~D~~~nHIgIdvns~~s~~~~~--  156 (236)
T d1hqla_          80 GNGPADGLAFFLAPPDSD-VKDAGEYLGLFNKSTATQPSKNQVVAVEFDTWTNPNFPEPSYRHIGINVNSIVSVATKR--  156 (236)
T ss_dssp             SSCCCCEEEEEEECTTCC-CCCCGGGTTTSCTTTTTCGGGCCCEEEEEECSCCSSSCCCSSCEEEEEESSSSCSEEEE--
T ss_pred             CCCCCceEEEEEeCCCCC-CCCCccccccccccccCCcccCceEEEEeeCccCCCCCCCCCCEEEEEcCCcccccccc--
Confidence            456899999999997654 45789999999976644 35789999999999999999999999999999999987743  


Q ss_pred             ccCCCCCCCCCCCCCCCCCCCccccceeecCCCcceEEEEEe--cCceEEEEEEEccCCCCCCCceeeeecCccccccce
Q 005257          175 YWPDNQTDSSGSNSNSGTGDDEKSFKELKLNNGKNYQVWIDY--ADSFINITMVEAGMKRPKRPLLSVPLNLSGVLEDEM  252 (705)
Q Consensus       175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~I~Y--~~~~~~v~~~~~~~~~~~~~~ls~~vdl~~~l~~~~  252 (705)
                       |                       ....+.+|+.++|||+|  ..++|+|+++..   +|..|+|++.|||+++|+++|
T Consensus       157 -~-----------------------~~~~l~~G~~~~v~I~Yd~~~~~L~V~l~~~---~~~~~~ls~~vdL~~~l~~~v  209 (236)
T d1hqla_         157 -W-----------------------EDSDIFSGKIATARISYDGSAEILTVVLSYP---DGSDYILSHSVDMRQNLPESV  209 (236)
T ss_dssp             -C-----------------------CHHHHTSCSCEEEEEEEETTTTEEEEEEEET---TTEEEEEEEECCGGGTSCSEE
T ss_pred             -c-----------------------ccccccCCCEEEEEEEEeCCCcEEEEEEecC---CCCCeeEEEEeCHHHhCCCcE
Confidence             2                       34578899999999999  777899999764   466789999999999999999


Q ss_pred             ecccccccccc-cccceeeeeeeccc
Q 005257          253 YVGFTAATGQL-VESHKILAWSFSNT  277 (705)
Q Consensus       253 ~vGfsastg~~-~~~h~i~~wsf~~~  277 (705)
                      |||||||||.. .+.|+|++|+|+++
T Consensus       210 ~vGFSasTG~~~~~~h~I~sWsF~s~  235 (236)
T d1hqla_         210 RVGISASTGNNQFLTVYILSWRFSSN  235 (236)
T ss_dssp             EEEEEEECCSCCCEEEEEEEEEEEEE
T ss_pred             EEEEEeECCCCCceEEEEEEeEeEec
Confidence            99999999974 67899999999975

>d1leda_ b.29.1.1 (A:) Legume lectin {West-central african legume (Griffonia simplicifolia) [TaxId: 3850]}

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Legume lectin
species: West-central african legume (Griffonia simplicifolia) [TaxId: 3850]

Probab=100.00  E-value=2e-53  Score=428.29  Aligned_cols=222  Identities=28%  Similarity=0.476  Sum_probs=194.0

Q ss_pred             ceeeEEeCCCC------CCCeEEEcceEeecCcEEecCCC------CCeEEEEEcCCCccccCCCCCcccceEEEEEEEE
Q 005257           24 SAVDFVFNGFN------SSNLSLYGTATVESRILTLTNST------TFTIGRALYPSKIPTKRPNSSYVYPFSTSFIFAM   91 (705)
Q Consensus        24 ~~~~f~f~~f~------~~~~~~~g~a~~~~~~l~lt~~~------~~~~Gr~~y~~pv~l~~~~~~~~~sF~t~F~f~i   91 (705)
                      .+++|+|++|.      ..||+|+|||++.+|.|+||+..      ..++|||+|++||+||++ +++++||+|+|+|.|
T Consensus         2 ~s~sF~f~~F~~~~~~~~~~l~l~G~A~~~~g~l~LT~~~~~~~~~~~s~Gra~y~~Pv~l~~~-t~~~asFsT~F~f~i   80 (243)
T d1leda_           2 NTVNFTYPDFWSYSLKNGTEITFLGDATRIPGALQLTKTDANGNPVRSSAGQASYSEPVFLWDS-TGKAASFYTSFTFLL   80 (243)
T ss_dssp             CCCEEEESCBCCTTSCTTTSEEEEETCEEETBEEECSCBCTTSCBCSSEEEEEEESSCEECBCT-TSCBCEEEEEEEEEE
T ss_pred             CceEEEcCCCCCCCCCCCCcEEEeeeeEEcCCEEEeccCCCCCCccccceEEEEeCCCeEecCC-CCcEeeEEEEEEEEc
Confidence            47899999995      36899999999999999999754      358999999999999995 789999999999998


Q ss_pred             ecCCCCCCCCceEEEEeeCCCCCCCCCCCcccccccCCCCC-CCCcEEEEEeecccCCCCCCCCCCeeEEecCCCccccc
Q 005257           92 APYKGVLAGHGLVFLFVPFHGIKGATEAQHLGLFNRTNDGN-SSNHVFGVEFDVFKNQEFNDIDENHVGIDVNSLTSVSA  170 (705)
Q Consensus        92 ~~~~~~~~g~G~aF~~~~~~~~~~~~~g~~lGl~~~~~~~~-~~~~~vaVEFDt~~n~~~~d~~~~Hvgidvns~~S~~~  170 (705)
                      .+.+ ..+||||||||+|... +.+..|++||+++..+.++ ..+++|||||||++|.+++||++||||||+|++.|.++
T Consensus        81 ~~~~-~~~gdGlAF~l~p~~~-~~~~~g~~lGl~~~~~~~~~~~~~~vAVEFDT~~n~~~~d~~~nHVgIdvns~~s~~~  158 (243)
T d1leda_          81 KNYG-APTADGLAFFLAPVDS-SVKDYGGFLGLFRHETAADPSKNQVVAVEFDTWINKDWNDPPYPHIGIDVNSIVSVAT  158 (243)
T ss_dssp             EESS-SSCBCEEEEEEEETTC-CCCCCGGGTTTCCTTTTTCGGGCCCEEEEEECSCCGGGTCCSSCEEEEEESSSSCSEE
T ss_pred             CCCC-CCCCCceEEEEcCCCC-CCCCCccccccccccccCCCccCcEEEEEEeCccccccCCCCCCceEEEecCcccccc
Confidence            7664 4579999999999765 4457899999999776544 57899999999999999999999999999999999877


Q ss_pred             ccccccCCCCCCCCCCCCCCCCCCCccccceeecCCCcceEEEEEe--cCceEEEEEEEccCCCCCCCceeeeecCcccc
Q 005257          171 HAAGYWPDNQTDSSGSNSNSGTGDDEKSFKELKLNNGKNYQVWIDY--ADSFINITMVEAGMKRPKRPLLSVPLNLSGVL  248 (705)
Q Consensus       171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~I~Y--~~~~~~v~~~~~~~~~~~~~~ls~~vdl~~~l  248 (705)
                      ++   |                       ....+.+|+.++|||+|  ..++|+|+++..   +|..|+|++.|||+++|
T Consensus       159 ~~---~-----------------------~~~~~~~g~~~~v~I~Yd~~~~~L~V~l~~~---~~~~p~ls~~idL~~~l  209 (243)
T d1leda_         159 TR---W-----------------------ENDDAYGSSIATAHITYDARSKILTVLLSYE---HGRDYILSHVVDLAKVL  209 (243)
T ss_dssp             EE---C-----------------------CHHHHTSCCEEEEEEEEETTTTEEEEEEEET---TSCEEEEEEECCHHHHS
T ss_pred             cc---c-----------------------ccCCcccCceeEEEEEEECCCCEEEEEEeeC---CCCCceEEEecCHHHhc
Confidence            54   2                       23468899999999999  668999999864   56778999999999999


Q ss_pred             ccceecccccccccccccceeeeeeecccc
Q 005257          249 EDEMYVGFTAATGQLVESHKILAWSFSNTK  278 (705)
Q Consensus       249 ~~~~~vGfsastg~~~~~h~i~~wsf~~~~  278 (705)
                      +++||||||||||. .|.|+|++|+|+++.
T Consensus       210 ~~~vyvGFSAsTG~-~~~h~I~sWsF~s~l  238 (243)
T d1leda_         210 PQKVRIGFSAGVGY-DEVTYILSWHFFSTL  238 (243)
T ss_dssp             CSEEEEEEEEEECB-SEEEEEEEEEEEEEC
T ss_pred             CCcEEEEEEcccCC-cceeeEEEEEEEeeC
Confidence            99999999999994 699999999999875

>d1fx5a_ b.29.1.1 (A:) Legume lectin {Furze (Ulex europaeus), UEA-I [TaxId: 3902]}

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Legume lectin
species: Furze (Ulex europaeus), UEA-I [TaxId: 3902]

Probab=100.00  E-value=1.3e-51  Score=416.12  Aligned_cols=224  Identities=28%  Similarity=0.398  Sum_probs=193.8

Q ss_pred             ceeeEEeCCCCC--CCeEEEcceEee-cCcEEecCCCC----CeEEEEEcCCCccccCCCCCcccceEEEEEEEEecC-C
Q 005257           24 SAVDFVFNGFNS--SNLSLYGTATVE-SRILTLTNSTT----FTIGRALYPSKIPTKRPNSSYVYPFSTSFIFAMAPY-K   95 (705)
Q Consensus        24 ~~~~f~f~~f~~--~~~~~~g~a~~~-~~~l~lt~~~~----~~~Gr~~y~~pv~l~~~~~~~~~sF~t~F~f~i~~~-~   95 (705)
                      ++++|+|++|++  +||+|+|||++. +|.||||+...    .++|||+|++||+|||+.+++++||+|+|+|.|... +
T Consensus         2 ~~~sF~f~~F~~~~~~l~l~G~A~~~~~g~l~LT~~~~~~~~~~~G~a~y~~Pv~l~~~~t~~~~sF~t~F~f~i~~~~~   81 (240)
T d1fx5a_           2 DDLSFKFKNFSQNGKDLSFQGNASVIETGVLQLNKVGNNLPDETGGIARYIAPIHIWNCNTGELASFITSFSFFMETSAN   81 (240)
T ss_dssp             CEEEEEESSCCTTCSSEEEEETCEECTTSCEESCCCSSSSCSEEEEEEEESSCEECEETTTTEECEEEEEEEEEEEESSC
T ss_pred             CceEEECCCCCCCCCCEEEeeeeEecCCCEEEccCCCCCCccceeEEEecCCCceeecCCCCceeeeEEEEEEEEeCCCC
Confidence            578999999974  689999999986 77999998763    488999999999999999999999999999999655 3


Q ss_pred             CCCCCCceEEEEeeCCCCCCCCCCCcccccccCCCCCCCCcEEEEEeecccCC-CCCCCCCCeeEEecCCCccccccccc
Q 005257           96 GVLAGHGLVFLFVPFHGIKGATEAQHLGLFNRTNDGNSSNHVFGVEFDVFKNQ-EFNDIDENHVGIDVNSLTSVSAHAAG  174 (705)
Q Consensus        96 ~~~~g~G~aF~~~~~~~~~~~~~g~~lGl~~~~~~~~~~~~~vaVEFDt~~n~-~~~d~~~~Hvgidvns~~S~~~~~~~  174 (705)
                      ...+||||||+|+|.. .|.+..|++|||+|.++ ++..+++|||||||++|+ +++||++||||||+|++.|..+.+  
T Consensus        82 ~~~ggdG~AFvl~p~~-~~~~~~g~~lGl~~~~~-~~~~~~~vAVEFDT~~n~~~~~D~~~nHIgid~ns~~s~~~~~--  157 (240)
T d1fx5a_          82 PKAATDGLTFFLAPPD-SPLRRAGGYFGLFNDTK-CDSSYQTVAVEFDTIGSPVNFWDPGFPHIGIDVNCVKSINAER--  157 (240)
T ss_dssp             GGGCCCEEEEEEECTT-CCCCBCGGGTTTBSSSC-CCGGGCCEEEEEECCCTTTSTTSCSSCEEEEEESSSSCSEEEE--
T ss_pred             CCCCCCcEEEEECCCC-CCCCCCCccccccccCC-CCccCceEEEEeeccccccccCCCCCCceEEccCCcccccccc--
Confidence            4568999999999975 46778999999999754 456789999999999995 778999999999999999876643  


Q ss_pred             ccCCCCCCCCCCCCCCCCCCCccccceeecCCCcceEEEEEe--cCceEEEEEEEccCCCCCCCceeeeecCccccccce
Q 005257          175 YWPDNQTDSSGSNSNSGTGDDEKSFKELKLNNGKNYQVWIDY--ADSFINITMVEAGMKRPKRPLLSVPLNLSGVLEDEM  252 (705)
Q Consensus       175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~I~Y--~~~~~~v~~~~~~~~~~~~~~ls~~vdl~~~l~~~~  252 (705)
                       |                        ...+.+|+.++|||+|  ..++|.|++...  .+|..|+++..|||+.+|+++|
T Consensus       158 -~------------------------~~~~~~g~~~~v~I~Yd~~~~~L~V~l~~~--~~~~~~~ls~~vdLs~~l~~~v  210 (240)
T d1fx5a_         158 -W------------------------NKRYGLNNVANVEIIYEASSKTLTASLTYP--SDQTSISVTSIVDLKEILPEWV  210 (240)
T ss_dssp             -C------------------------CCCCSGGGCEEEEEEEETTTTEEEEEEEET--TTTEEEEEEEECCGGGTSCSEE
T ss_pred             -c------------------------ccccCCCCeEEEEEEEcCCCCEEEEEEecC--CCceeeEEeEEEchHHhCCCcE
Confidence             2                        2346788899999999  666889988754  4677889999999999999999


Q ss_pred             eccccccccc-ccccceeeeeeecccc
Q 005257          253 YVGFTAATGQ-LVESHKILAWSFSNTK  278 (705)
Q Consensus       253 ~vGfsastg~-~~~~h~i~~wsf~~~~  278 (705)
                      |||||||||. ..+.|+|++|+|+++.
T Consensus       211 ~vGFSasTG~~~~~~H~I~sWsFsst~  237 (240)
T d1fx5a_         211 SVGFSGSTYIGRQATHEVLNWYFTSTF  237 (240)
T ss_dssp             EEEEEEEEETTSCEEEEEEEEEEEEES
T ss_pred             EEEEEeECCCCCCceEEEEEEEeEEec
Confidence            9999999995 5689999999999864

>d1qnwa_ b.29.1.1 (A:) Legume lectin {Furze (Ulex europaeus), UEA-II [TaxId: 3902]}

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Legume lectin
species: Furze (Ulex europaeus), UEA-II [TaxId: 3902]

Probab=100.00  E-value=3e-51  Score=412.92  Aligned_cols=222  Identities=31%  Similarity=0.542  Sum_probs=193.1

Q ss_pred             ceeeEEeCCCCC--CCeEEEcceEee-cCcEEecCCC---CCeEEEEEcCCCccccCCCCCcccceEEEEEEEEecCCCC
Q 005257           24 SAVDFVFNGFNS--SNLSLYGTATVE-SRILTLTNST---TFTIGRALYPSKIPTKRPNSSYVYPFSTSFIFAMAPYKGV   97 (705)
Q Consensus        24 ~~~~f~f~~f~~--~~~~~~g~a~~~-~~~l~lt~~~---~~~~Gr~~y~~pv~l~~~~~~~~~sF~t~F~f~i~~~~~~   97 (705)
                      ++++|+|++|++  .||+|+|||++. ++.|+||+..   ..++|||+|++||+||++.+++++||+|+|+|.|.+++ .
T Consensus         2 ~~lsF~f~~F~~~~~~l~l~GdA~i~~~g~l~LT~~~~~~~~~~G~a~y~~Pi~l~~~~~~~~~sF~t~F~f~i~~~~-~   80 (237)
T d1qnwa_           2 DDLSFNFDKFVPNQKNIIFQGDASVSTTGVLQVTKVSKPTTTSIGRALYAAPIQIWDSITGKVASFATSFSFVVKADK-S   80 (237)
T ss_dssp             CSEEEEESSCCTTCTTEEEEETCEECTTSCEESSCCC--CCCEEEEEEESSCEECBCTTTCCBCEEEEEEEEECCBSS-S
T ss_pred             CcEEEEcCCCCCCCCCEEEeeceEEcCCCeEEeccCCCCccccEEEEEECCCEEecCCCCcceeeEEEEEEEEEecCC-C
Confidence            578999999964  789999999987 6799999865   36899999999999999999999999999999997764 4


Q ss_pred             CCCCceEEEEeeCCC-CCCCCCCCcccccccCCCCCCCCcEEEEEeecccCCCCC--CCCCCeeEEecCCCccccccccc
Q 005257           98 LAGHGLVFLFVPFHG-IKGATEAQHLGLFNRTNDGNSSNHVFGVEFDVFKNQEFN--DIDENHVGIDVNSLTSVSAHAAG  174 (705)
Q Consensus        98 ~~g~G~aF~~~~~~~-~~~~~~g~~lGl~~~~~~~~~~~~~vaVEFDt~~n~~~~--d~~~~Hvgidvns~~S~~~~~~~  174 (705)
                      .+||||||+|+|... .|.++.++++|++|.. ++.+.+++|||||||++|.+++  ||++||||||+|++.|.+++   
T Consensus        81 ~ggdG~aF~l~p~~~~~~~~~~~~~~g~~~~~-~~~~~~~~vAVEFDT~~n~~~~~~d~~~nHvgid~ns~~s~~~~---  156 (237)
T d1qnwa_          81 DGVDGLAFFLAPANSQIPSGSSAGMFGLFSSS-DSKSSNQIIAVEFDTYFGKAYNPWDPDFKHIGIDVNSIKSIKTV---  156 (237)
T ss_dssp             CCCCEEEEEEEETTCCCCTTCCGGGTTTCSSS-SCCTTSCCEEEEEECCCCTTTCTTSCSSCEEEEEESSSSCSEEE---
T ss_pred             CCcceeEEEEeCCCCCCCCCCccccccccCCC-CCCCcccEEEEEeeceecCCcCCCCCCCCeEEEECCCCCccccc---
Confidence            589999999999864 5677888899998854 3567899999999999998765  58999999999999987663   


Q ss_pred             ccCCCCCCCCCCCCCCCCCCCccccceeecCCCcceEEEEEe--cCceEEEEEEEccCCCCCCCceeeeecCccccccce
Q 005257          175 YWPDNQTDSSGSNSNSGTGDDEKSFKELKLNNGKNYQVWIDY--ADSFINITMVEAGMKRPKRPLLSVPLNLSGVLEDEM  252 (705)
Q Consensus       175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~I~Y--~~~~~~v~~~~~~~~~~~~~~ls~~vdl~~~l~~~~  252 (705)
                                                .+.+.+|+.++|||+|  ..++|+|++..  ..+|..|+|+..|||+++|+++|
T Consensus       157 --------------------------~~~~~~G~~~~v~I~Yd~~~~~L~V~l~~--~~~~~~p~ls~~vDLs~~l~~~v  208 (237)
T d1qnwa_         157 --------------------------KWDWRNGEVADVVITYRAPTKSLTVCLSY--PSDGTSNIITASVDLKAILPEWV  208 (237)
T ss_dssp             --------------------------ECCCCTTCCEEEEEEEEGGGTEEEEEEEC--TTTCCEEEEEEECCHHHHSCSEE
T ss_pred             --------------------------ccccCCCcEEEEEEEEcCCCcEEEEEEec--CCCCccceEEEEEChHHhCCCcE
Confidence                                      3457899999999999  56788888764  45788999999999999999999


Q ss_pred             ecccccccccc--cccceeeeeeecccc
Q 005257          253 YVGFTAATGQL--VESHKILAWSFSNTK  278 (705)
Q Consensus       253 ~vGfsastg~~--~~~h~i~~wsf~~~~  278 (705)
                      |||||||||..  .|.|+|++|+|+++.
T Consensus       209 yvGFSasTG~~~~~q~h~I~sWsF~s~l  236 (237)
T d1qnwa_         209 SVGFSGGVGNAAEFETHDVLSWYFTSNL  236 (237)
T ss_dssp             EEEEEEEESCGGGCBCCEEEEEEEEEEC
T ss_pred             EEEEEeECCCCCCccEeEEEEeEeEEec
Confidence            99999999975  489999999999763

>d1gzca_ b.29.1.1 (A:) Legume lectin {Cockspur coral tree (Erythrina crista-galli) [TaxId: 49817]}

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Legume lectin
species: Cockspur coral tree (Erythrina crista-galli) [TaxId: 49817]

Probab=100.00  E-value=4.8e-51  Score=411.68  Aligned_cols=221  Identities=30%  Similarity=0.515  Sum_probs=191.8

Q ss_pred             ceeeEEeCCCCC--CCeEEEcceEee-cCcEEecCCCC------CeEEEEEcCCCccccCCCCCcccceEEEEEEEEecC
Q 005257           24 SAVDFVFNGFNS--SNLSLYGTATVE-SRILTLTNSTT------FTIGRALYPSKIPTKRPNSSYVYPFSTSFIFAMAPY   94 (705)
Q Consensus        24 ~~~~f~f~~f~~--~~~~~~g~a~~~-~~~l~lt~~~~------~~~Gr~~y~~pv~l~~~~~~~~~sF~t~F~f~i~~~   94 (705)
                      ++++|+|++|++  .||+|+|||.+. +|.||||+...      +++|||+|++||+||++.+++++||+|+|+|.|...
T Consensus         2 ~~~sF~f~~F~~~~~nl~l~G~A~i~~~g~l~LT~~~~~~~~~~~~~Gr~~y~~Pv~l~~~~~~~~~sFst~F~f~i~~~   81 (239)
T d1gzca_           2 ETISFSFSEFEPGNDNLTLQGAALITQSGVLQLTKINQNGMPAWDSTGRTLYTKPVHMWDSTTGTVASFETRFSFSIEQP   81 (239)
T ss_dssp             EEEEEEESSCCTTCTTEEEEETCEECTTSCEESSCBCTTSCBCSSCEEEEEESSCEECBCTTTCCBCEEEEEEEEECCCC
T ss_pred             eeEEEEeCCCCCCCCCeEEeeeeEECCCCeEEccCCCCCCcccccceEEEEeCCCeEecCCCCCceeeEEEEEEEEEecC
Confidence            478999999974  689999999987 68999998754      488999999999999999999999999999999654


Q ss_pred             -CCCCCCCceEEEEeeCCCCCCCCCCCcccccccCCCCCCCCcEEEEEeecccCCCCCCCCCCeeEEecCCCcccccccc
Q 005257           95 -KGVLAGHGLVFLFVPFHGIKGATEAQHLGLFNRTNDGNSSNHVFGVEFDVFKNQEFNDIDENHVGIDVNSLTSVSAHAA  173 (705)
Q Consensus        95 -~~~~~g~G~aF~~~~~~~~~~~~~g~~lGl~~~~~~~~~~~~~vaVEFDt~~n~~~~d~~~~Hvgidvns~~S~~~~~~  173 (705)
                       +...+||||||+|+|.... .+..+++||+++..+. ...++.|||||||++|. ++||+++|||||+|++.|.++.  
T Consensus        82 ~~~~~g~dG~aF~l~p~~~~-~~~~~g~lg~~~~~~~-~~~~~~vaVEFDT~~n~-~~d~~~~HvgI~vn~~~s~~t~--  156 (239)
T d1gzca_          82 YTRPLPADGLVFFMGPTKSK-PAQGYGYLGVFNNSKQ-DNSYQTLAVEFDTFSNP-WDPPQVPHIGIDVNSIRSIKTQ--  156 (239)
T ss_dssp             CSSSCCCEEEEEEEECSSCC-CCCCGGGTTTCSSSSC-CGGGCCEEEEEECSCCT-TSCSSSSEEEEEESSSSCSEEE--
T ss_pred             CCCCCCCCeEEEEECCCCCC-CCCCcccccccccCCC-CCccceEEEEEEccccC-CCCCCCCEEEEEECCccccccC--
Confidence             3456899999999998654 4567899999986554 45788999999999994 7899999999999999998774  


Q ss_pred             cccCCCCCCCCCCCCCCCCCCCccccceeecCCCcceEEEEEe--cCceEEEEEEEccCCCCCCCceeeeecCccccccc
Q 005257          174 GYWPDNQTDSSGSNSNSGTGDDEKSFKELKLNNGKNYQVWIDY--ADSFINITMVEAGMKRPKRPLLSVPLNLSGVLEDE  251 (705)
Q Consensus       174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~I~Y--~~~~~~v~~~~~~~~~~~~~~ls~~vdl~~~l~~~  251 (705)
                                                 .+++.+|+.++|||+|  ..++|+|++..  ..+|..|+|+..|||+++|+++
T Consensus       157 ---------------------------~~~l~~G~~~~v~I~Yd~~~~~L~V~l~~--~~~~~~~~ls~~vdL~~~l~~~  207 (239)
T d1gzca_         157 ---------------------------PFQLDNGQVANVVIKYDAPSKILHVVLVY--PSSGAIYTIAEIVDVKQVLPDW  207 (239)
T ss_dssp             ---------------------------ECCCCTTCEEEEEEEEETTTTEEEEEEEC--TTTCCEEEEEEECCHHHHSCSE
T ss_pred             ---------------------------CccccCCCEEEEEEEEeCCCcEEEEEEec--CCCCcceeeeeEechHHhcCCc
Confidence                                       3468899999999999  55678888764  4578899999999999999999


Q ss_pred             eeccccccccc---ccccceeeeeeecccc
Q 005257          252 MYVGFTAATGQ---LVESHKILAWSFSNTK  278 (705)
Q Consensus       252 ~~vGfsastg~---~~~~h~i~~wsf~~~~  278 (705)
                      ||||||||||.   ..|.|+|++|+|+++.
T Consensus       208 vyvGFSAsTG~~~~~~~~H~V~sWsF~s~l  237 (239)
T d1gzca_         208 VDVGLSGATGAQRDAAETHDVYSWSFQASL  237 (239)
T ss_dssp             EEEEEEEEECSSTTCCCCCEEEEEEEEEEE
T ss_pred             EEEEEEEEcCCCCCCceeeEEEEEEeEeeC
Confidence            99999999994   5789999999999864

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=6.2e-52  Score=432.40  Aligned_cols=267  Identities=24%  Similarity=0.428  Sum_probs=222.5

Q ss_pred             HHHHHHHhCCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCCchhHHHHHHHHHHhccCCCCCcceeeeeeeeccC
Q 005257          356 YQEIEAATKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKG  435 (705)
Q Consensus       356 ~~el~~at~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~  435 (705)
                      |++++...++|+..+.||+|+||+||+|.++.+++.||||+++.. ....++|.+|+++|++++|||||+++++|.+ ++
T Consensus         9 ~~~wei~~~~~~~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~i~~~-~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~-~~   86 (287)
T d1opja_           9 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR-EP   86 (287)
T ss_dssp             CCTTBCCGGGEEEEEETTTTTTSSEEEEEEGGGTEEEEEEECCTT-CSCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SS
T ss_pred             CcccEecHHHeEEeeEEeeCCCeEEEEEEECCCCeEEEEEEECCc-cchHHHHHHHHHHHHhCCCCCEecCCccEee-CC
Confidence            334444456788899999999999999999999999999998654 3456789999999999999999999999876 67


Q ss_pred             ceEEEEeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccc
Q 005257          436 SLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLA  515 (705)
Q Consensus       436 ~~~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla  515 (705)
                      .+++||||+++|+|.+++.+.... .+++..++.++.||+.||+|||+   ++|+||||||+|||+++++++||+|||+|
T Consensus        87 ~~~iv~E~~~~g~l~~~l~~~~~~-~~~~~~~~~i~~qi~~gL~yLH~---~~iiHrDlKp~NILl~~~~~~Kl~DFG~a  162 (287)
T d1opja_          87 PFYIITEFMTYGNLLDYLRECNRQ-EVSAVVLLYMATQISSAMEYLEK---KNFIHRDLAARNCLVGENHLVKVADFGLS  162 (287)
T ss_dssp             SCEEEEECCTTCBHHHHHHHSCTT-TSCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECGGGCEEECCCCCT
T ss_pred             eeEEEeecccCcchHHHhhhcccc-chHHHHHHHHHHHHHHHHHHHHH---CCcccCccccCeEEECCCCcEEEccccce
Confidence            889999999999999999765433 79999999999999999999998   99999999999999999999999999999


Q ss_pred             eecCCCCcceeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhHHHHH
Q 005257          516 RMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDA  595 (705)
Q Consensus       516 ~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~  595 (705)
                      +..............||+.|||||++.+..++.++|||||||++|||++|..|+......  ..+.+.+..+        
T Consensus       163 ~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~k~DiwS~Gv~l~ell~~~~p~~~~~~~--~~~~~~i~~~--------  232 (287)
T d1opja_         163 RLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDL--SQVYELLEKD--------  232 (287)
T ss_dssp             TTCCSSSSEEETTEEECGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCSSTTCCH--HHHHHHHHTT--------
T ss_pred             eecCCCCceeeccccccccccChHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCcchH--HHHHHHHhcC--------
Confidence            977655544445567899999999999999999999999999999999987776544321  2222222222        


Q ss_pred             hhhcCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHhccc
Q 005257          596 RLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLEGKIE  641 (705)
Q Consensus       596 ~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~  641 (705)
                       .+  ...+....+.+.+++..||+.||++|||+.|+++.|+...+
T Consensus       233 -~~--~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ei~~~L~~~~~  275 (287)
T d1opja_         233 -YR--MERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQ  275 (287)
T ss_dssp             -CC--CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTS
T ss_pred             -CC--CCCCccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHH
Confidence             11  22333455678999999999999999999999999986654

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=2.4e-51  Score=430.44  Aligned_cols=257  Identities=29%  Similarity=0.480  Sum_probs=200.7

Q ss_pred             CCCcceEEeecCceEEEEEEEcCCCe---EEEEEEeccC-CchhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEEE
Q 005257          365 GFSEENVIGVGGNGKVYKGVLEGGGA---EIAVKRISHE-NDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLV  440 (705)
Q Consensus       365 ~f~~~~~LG~G~fg~Vy~~~~~~~~~---~vavK~i~~~-~~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~lV  440 (705)
                      +|+..++||+|+||+||+|.++.+++   .||||++... .....+.|.+|+++|++++|||||+++|+|.. ++.+++|
T Consensus        27 ~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~-~~~~~iv  105 (299)
T d1jpaa_          27 CVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLEGVVTK-STPVMII  105 (299)
T ss_dssp             GEEEEEEEEECSSSEEEEEEECC---CCEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSSCEEE
T ss_pred             hcEEeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEECcccCHHHHHHHHHHHHHHHhCCCCCCccEEEEEee-CCEEEEE
Confidence            34556899999999999999976553   6899988665 34456789999999999999999999999976 6789999


Q ss_pred             EeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecCC
Q 005257          441 YDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGH  520 (705)
Q Consensus       441 ~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~~  520 (705)
                      ||||++|+|.+++.....  .+++.++++++.|||.||.|||+   ++|+||||||+||||+.++.+||+|||+++....
T Consensus       106 ~Ey~~~g~L~~~~~~~~~--~l~~~~~~~i~~qia~gl~yLH~---~~iiHrDlKp~NILl~~~~~~Kl~DFGla~~~~~  180 (299)
T d1jpaa_         106 TEFMENGSLDSFLRQNDG--QFTVIQLVGMLRGIAAGMKYLAD---MNYVHRDLAARNILVNSNLVCKVSDFGLSRFLED  180 (299)
T ss_dssp             EECCTTEEHHHHHHTTTT--CSCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTCCEEECCC--------
T ss_pred             EEecCCCcceeeeccccC--CCCHHHHHHHHHHHHHHHHHHhh---CCCccCccccceEEECCCCcEEECCcccceEccC
Confidence            999999999998876433  69999999999999999999999   9999999999999999999999999999987654


Q ss_pred             CCcce----eeeeeccccCCCccccccCCCCccccEEEEehhHHHHhh-CCCCCCCCCccHHHHHHHHHHhCchhHHHHH
Q 005257          521 GQVAS----TTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLS-GRRPIEEGKPNLVEMVWELMVQGKLLDALDA  595 (705)
Q Consensus       521 ~~~~~----~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~Ellt-G~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~  595 (705)
                      .....    .....||+.|||||++.++.++.++|||||||++|||+| |+.||.+....   .+...+..+        
T Consensus       181 ~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~sDvwS~Gvvl~el~t~g~~Pf~~~~~~---~~~~~i~~~--------  249 (299)
T d1jpaa_         181 DTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQ---DVINAIEQD--------  249 (299)
T ss_dssp             ---------------CGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH---HHHHHHHTT--------
T ss_pred             CCCcceeeecccccCCccccCHHHHhcCCCCcccccccchHHHHHHHhCCCCCCCCCCHH---HHHHHHHcC--------
Confidence            33221    222467999999999999999999999999999999998 89999765431   122222222        


Q ss_pred             hhhcCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHhccc
Q 005257          596 RLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLEGKIE  641 (705)
Q Consensus       596 ~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~  641 (705)
                       .+  ...+.+....+.+++.+||+.||++|||+.||++.|+.+++
T Consensus       250 -~~--~~~~~~~~~~l~~li~~cl~~~P~~RPs~~ei~~~L~~~l~  292 (299)
T d1jpaa_         250 -YR--LPPPMDCPSALHQLMLDCWQKDRNHRPKFGQIVNTLDKMIR  292 (299)
T ss_dssp             -CC--CCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHH
T ss_pred             -CC--CCCCccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhc
Confidence             11  22334456678999999999999999999999999987765

>d2d3sa1 b.29.1.1 (A:1-237) Legume lectin {Winged bean (Psophocarpus tetragonolobus), basic agglutinin [TaxId: 3891]}

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Legume lectin
species: Winged bean (Psophocarpus tetragonolobus), basic agglutinin [TaxId: 3891]

Probab=100.00  E-value=9.2e-51  Score=408.74  Aligned_cols=217  Identities=31%  Similarity=0.494  Sum_probs=188.9

Q ss_pred             ceeeEEeCCCCC--CCeEEEcceEee-cCcEEecCCC-----CCeEEEEEcCCCccccCCCCCcccceEEEEEEEEecC-
Q 005257           24 SAVDFVFNGFNS--SNLSLYGTATVE-SRILTLTNST-----TFTIGRALYPSKIPTKRPNSSYVYPFSTSFIFAMAPY-   94 (705)
Q Consensus        24 ~~~~f~f~~f~~--~~~~~~g~a~~~-~~~l~lt~~~-----~~~~Gr~~y~~pv~l~~~~~~~~~sF~t~F~f~i~~~-   94 (705)
                      ++++|+|++|++  +||+|+|||++. ++.||||++.     .+++|||+|++||+||++.+++++||+|+|+|.|... 
T Consensus         1 ~t~sF~f~~F~~~~~~l~l~G~A~i~~~g~l~LT~~~~~~~~~~~~G~a~y~~pi~l~~~~~~~~~sF~t~F~f~i~~~~   80 (237)
T d2d3sa1           1 KTISFNFNQFHQNEEQLKLQRDARISSNSVLELTKVVNGVPTWNSTGRALYAKPVQVWDSTTGNVASFETRFSFSIRQPF   80 (237)
T ss_dssp             CEEEEEESSCCSSCTTEEEEETCEECTTSCEECSCEETTEECSSCEEEEEESSCEECBCTTTCCBCEEEEEEEEECCCSC
T ss_pred             CeEEEEeCCCCCCCCCEEEeeeeEeCCCCeEEcCCCCCCCcccccEEEEEeCCCEEeecCCCCceeeEEEEEEEEeecCC
Confidence            478999999953  789999999986 5799999864     4699999999999999999999999999999999654 


Q ss_pred             CCCCCCCceEEEEeeCCCCCCCCCCCcccccccCCCCCCCCcEEEEEeecccCCCCCCCCCCeeEEecCCCccccccccc
Q 005257           95 KGVLAGHGLVFLFVPFHGIKGATEAQHLGLFNRTNDGNSSNHVFGVEFDVFKNQEFNDIDENHVGIDVNSLTSVSAHAAG  174 (705)
Q Consensus        95 ~~~~~g~G~aF~~~~~~~~~~~~~g~~lGl~~~~~~~~~~~~~vaVEFDt~~n~~~~d~~~~Hvgidvns~~S~~~~~~~  174 (705)
                      +...+||||||+|+|... +.+..|++||+++..    ..+++|||||||++|.  +||++||||||+|++.|.+..   
T Consensus        81 ~~~~g~dGlaFvl~p~~~-~~~~~gg~lG~~~~~----~~~~~vaVEFDT~~n~--~d~~~nHvgI~vns~~s~~~~---  150 (237)
T d2d3sa1          81 PRPHPADGLVFFIAPPNT-QTGEGGGYFGIYNPL----SPYPFVAVEFDTFRNT--WDPQIPHIGIDVNSVISTKTV---  150 (237)
T ss_dssp             CSSCCCEEEEEEEECSSC-CCCBCGGGTTTBCTT----SCCCCEEEEEECSCCT--TCCSSSEEEEEESSSSCSEEE---
T ss_pred             CCCCCCCeEEEEeCCCCc-cCCccccccccccCC----CcCceEEEEEEeecCC--CCCCCCcEEEEcCCCcccccc---
Confidence            345678999999999764 456789999998864    3578999999999997  699999999999999987653   


Q ss_pred             ccCCCCCCCCCCCCCCCCCCCccccceeecCCCcceEEEEEe--cCceEEEEEEEccCCCCCCCceeeeecCccccccce
Q 005257          175 YWPDNQTDSSGSNSNSGTGDDEKSFKELKLNNGKNYQVWIDY--ADSFINITMVEAGMKRPKRPLLSVPLNLSGVLEDEM  252 (705)
Q Consensus       175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~I~Y--~~~~~~v~~~~~~~~~~~~~~ls~~vdl~~~l~~~~  252 (705)
                                                .+.+.+|+.++|||+|  ..++|+|++....  +|..|+++..|||+.+|+++|
T Consensus       151 --------------------------~~~l~~G~~~~v~I~Yd~~~~~L~V~l~~~~--~~~~~~ls~~vdL~~~l~~~v  202 (237)
T d2d3sa1         151 --------------------------PFTLDNGGIANVVIKYDASTKILHVVLVFPS--LGTIYTIADIVDLKQVLPESV  202 (237)
T ss_dssp             --------------------------ECCCCTTCEEEEEEEEETTTTEEEEEEEETT--TTEEEEEEEECCHHHHSCSEE
T ss_pred             --------------------------ceeecCCCEEEEEEEEECCCCEEEEEEEcCC--CCcccceeeEechHHhCCCcE
Confidence                                      4468899999999999  6678888887644  577789999999999999999


Q ss_pred             eccccccccc-------ccccceeeeeeecccc
Q 005257          253 YVGFTAATGQ-------LVESHKILAWSFSNTK  278 (705)
Q Consensus       253 ~vGfsastg~-------~~~~h~i~~wsf~~~~  278 (705)
                      |||||||||.       ..|.|+|++|+|+++.
T Consensus       203 yvGFSasTG~~~~~~~~~~e~h~I~sWsFss~l  235 (237)
T d2d3sa1         203 NVGFSAATGDPSGKQRNATETHDILSWSFSASL  235 (237)
T ss_dssp             EEEEEEEECCGGGCCTTCCCCCEEEEEEEEEEC
T ss_pred             EEEEEeECCCCccCccccceeeEEEEeEeEeeC
Confidence            9999999994       4699999999999864

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.9e-51  Score=426.08  Aligned_cols=261  Identities=25%  Similarity=0.428  Sum_probs=207.8

Q ss_pred             hCCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccC--CchhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEEE
Q 005257          363 TKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHE--NDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLV  440 (705)
Q Consensus       363 t~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~--~~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~lV  440 (705)
                      .++|...+.||+|+||+||+|+++   ..||||+++..  .....+.|.+|+++|++++||||+++++++.  .+.+++|
T Consensus         7 ~~~~~~~~~lG~G~fg~Vy~~~~~---~~vAvK~~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~~~~~~~--~~~~~lv   81 (276)
T d1uwha_           7 DGQITVGQRIGSGSFGTVYKGKWH---GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST--APQLAIV   81 (276)
T ss_dssp             TTCCCCCSEEEECSSCEEEEEESS---SEEEEEECCCSSCCTTHHHHHHHHHHHHTTCCCTTBCCEEEEEC--SSSCEEE
T ss_pred             cccEEEEEEEeeCCCcEEEEEEEC---CEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeeeEEEe--ccEEEEE
Confidence            467888999999999999999875   35999998654  3456788999999999999999999999875  3568999


Q ss_pred             EeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecCC
Q 005257          441 YDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGH  520 (705)
Q Consensus       441 ~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~~  520 (705)
                      |||+++|+|.+++...+.  .+++.+++.++.|||+||+|||+   ++||||||||+|||++.++.+||+|||+|+....
T Consensus        82 ~Ey~~~g~L~~~l~~~~~--~~~~~~~~~i~~qi~~gl~yLH~---~~ivHrDlKp~NiLl~~~~~~Kl~DFGla~~~~~  156 (276)
T d1uwha_          82 TQWCEGSSLYHHLHIIET--KFEMIKLIDIARQTAQGMDYLHA---KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSR  156 (276)
T ss_dssp             EECCCEEEHHHHHHTSCC--CCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEEETTSSEEECCCCCSCC---
T ss_pred             EecCCCCCHHHHHhhccC--CCCHHHHHHHHHHHHHHHHHHhc---CCEeccccCHHHEEEcCCCCEEEccccceeeccc
Confidence            999999999999976543  59999999999999999999998   9999999999999999999999999999987654


Q ss_pred             CCc-ceeeeeeccccCCCcccccc---CCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhHHHHHh
Q 005257          521 GQV-ASTTRVVGTVGYLAPEVFSS---GRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDAR  596 (705)
Q Consensus       521 ~~~-~~~~~~~gt~~y~APE~~~~---~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~  596 (705)
                      ... .......||+.|||||++.+   ..++.++|||||||++|||+||+.||.+....  ..+...+..+....    .
T Consensus       157 ~~~~~~~~~~~gt~~y~APE~l~~~~~~~~~~~sDiwS~Gv~l~el~tg~~Pf~~~~~~--~~~~~~~~~~~~~p----~  230 (276)
T d1uwha_         157 WSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNR--DQIIFMVGRGYLSP----D  230 (276)
T ss_dssp             ---------CCCCGGGCCHHHHTTCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCH--HHHHHHHHHTSCCC----C
T ss_pred             cCCcccccccccCcccCCHHHHhcccCCCCCchhhhhhhHHHHHHHHHCCCCCCCCChH--HHHHHHHhcCCCCC----c
Confidence            332 23345689999999999864   35899999999999999999999999865432  22223333222111    0


Q ss_pred             hhcCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHhcccc
Q 005257          597 LRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLEGKIEA  642 (705)
Q Consensus       597 l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~~  642 (705)
                      +   ...+...++.+.+++..||+.||++|||++|+++.|+.+.+.
T Consensus       231 ~---~~~~~~~~~~l~~li~~cl~~dp~~RPt~~~il~~Le~l~~~  273 (276)
T d1uwha_         231 L---SKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIELLARS  273 (276)
T ss_dssp             G---GGSCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred             c---hhccccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHHc
Confidence            0   112233456788999999999999999999999999876653

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=7.1e-51  Score=419.22  Aligned_cols=257  Identities=28%  Similarity=0.408  Sum_probs=200.7

Q ss_pred             CCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCCchhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEEEEee
Q 005257          364 KGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDY  443 (705)
Q Consensus       364 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~lV~E~  443 (705)
                      ++|+..+.||+|+||+||+|.+. +++.||||+++.. ....++|.+|++++++++||||++++|+|.. ++.+++||||
T Consensus         5 ~~~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~i~~~-~~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~-~~~~~lv~E~   81 (263)
T d1sm2a_           5 SELTFVQEIGSGQFGLVHLGYWL-NKDKVAIKTIREG-AMSEEDFIEEAEVMMKLSHPKLVQLYGVCLE-QAPICLVFEF   81 (263)
T ss_dssp             SCEEEEEEEECCSSCCEEEEEET-TTEEEEEEECCSS-SSCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSSCEEEEEC
T ss_pred             HHcEEEEEEeeCCCeEEEEEEEC-CCCEEEEEEECCC-cCcHHHHHHHHHHHHhcCCCCcccccceecc-CCceEEEEEe
Confidence            46778899999999999999987 4678999999754 3445789999999999999999999999986 6788999999


Q ss_pred             CCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecCCCCc
Q 005257          444 MENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQV  523 (705)
Q Consensus       444 ~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~~~~~  523 (705)
                      +++|+|.+++....  ..+++..+++++.|+|.||.|||+   ++|+||||||+|||+++++++||+|||+++.......
T Consensus        82 ~~~g~L~~~l~~~~--~~~~~~~~~~i~~qia~gl~~lH~---~~iiHrDlKp~Nill~~~~~~Kl~DFGla~~~~~~~~  156 (263)
T d1sm2a_          82 MEHGCLSDYLRTQR--GLFAAETLLGMCLDVCEGMAYLEE---ACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQY  156 (263)
T ss_dssp             CTTCBHHHHHHTTT--TCCCHHHHHHHHHHHHHHHHHHHH---TTCCCTTCSGGGEEECGGGCEEECSCC----------
T ss_pred             cCCCcHHHHhhccc--cCCCHHHHHHHHHHHHHHHHhhhc---cceeecccchhheeecCCCCeEecccchheeccCCCc
Confidence            99999999987643  268999999999999999999998   9999999999999999999999999999987765544


Q ss_pred             ceeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhHHHHHhhhcCCCC
Q 005257          524 ASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRAKGGF  603 (705)
Q Consensus       524 ~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~l~~~~~~  603 (705)
                      .......||+.|||||++.+..++.++|||||||++|||+|+..|+..... . ..+.+.+..+.         +  ...
T Consensus       157 ~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvil~el~t~~~~~~~~~~-~-~~~~~~i~~~~---------~--~~~  223 (263)
T d1sm2a_         157 TSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRS-N-SEVVEDISTGF---------R--LYK  223 (263)
T ss_dssp             --------CTTSCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSCC-H-HHHHHHHHHTC---------C--CCC
T ss_pred             eeecceecCcccCChHHhcCCCCCchhhhcchHHHHHHHHHCCCCCCCCCC-H-HHHHHHHHhcC---------C--CCC
Confidence            444456899999999999999999999999999999999995544433322 1 11222222221         1  222


Q ss_pred             CHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHhccc
Q 005257          604 DEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLEGKIE  641 (705)
Q Consensus       604 ~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~  641 (705)
                      +..+.+.+.+++..||+.||++||||+|+++.|+++.+
T Consensus       224 p~~~~~~l~~li~~cl~~~p~~Rps~~~il~~L~~i~e  261 (263)
T d1sm2a_         224 PRLASTHVYQIMNHCWKERPEDRPAFSRLLRQLAEIAE  261 (263)
T ss_dssp             CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             ccccCHHHHHHHHHHccCCHhHCcCHHHHHHHHHHHHh
Confidence            33345678899999999999999999999999987654

>d1g9fa_ b.29.1.1 (A:) Legume lectin {Soybean (Glycine max) [TaxId: 3847]}

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Legume lectin
species: Soybean (Glycine max) [TaxId: 3847]

Probab=100.00  E-value=1.5e-50  Score=410.95  Aligned_cols=219  Identities=34%  Similarity=0.527  Sum_probs=187.3

Q ss_pred             CceeeEEeCCCCC--CCeEEEcceEee-cCcEEecCCC------CCeEEEEEcCCCccccCCCCCcccceEEEEEEEEec
Q 005257           23 ISAVDFVFNGFNS--SNLSLYGTATVE-SRILTLTNST------TFTIGRALYPSKIPTKRPNSSYVYPFSTSFIFAMAP   93 (705)
Q Consensus        23 ~~~~~f~f~~f~~--~~~~~~g~a~~~-~~~l~lt~~~------~~~~Gr~~y~~pv~l~~~~~~~~~sF~t~F~f~i~~   93 (705)
                      +++++|+|++|++  .||+|+|+|++. +|.|+||++.      ..++|||+|++||+||++.+++++||+|+|+|.|..
T Consensus         1 a~~~sF~f~~F~~~~~~l~l~G~A~v~~~g~l~LT~~~~~~~~~~~~~Gra~y~~Pv~l~~~~~~~~~sf~t~f~F~i~~   80 (251)
T d1g9fa_           1 AETVSFSWNKFVPKQPNMILQGDAIVTSSGKLQLNKVDENGTPKPSSLGRALYSTPIHIWDKETGSVASFAASFNFTFYA   80 (251)
T ss_dssp             CEEEEEEESSCCC-CTTEEEEETCBCCTTC-CBCSCBC---CBCTTCEEEEEESSCEECBCC-CCCBCEEEEEEEEEEEC
T ss_pred             CceEEEEeCCCCCCCCCEEEeeeEEECCCCEEEecCCcCCCcccCceEEEEEeCCCEEccCCCCccceeeEEEEEEEEec
Confidence            3579999999974  689999999986 7799999865      358999999999999999999999999999999998


Q ss_pred             CCCCCCCCceEEEEeeCCCCCCCCCCCcccccccCCCCCCCCcEEEEEeecccCCCCCCCCCCeeEEecCCCcccccccc
Q 005257           94 YKGVLAGHGLVFLFVPFHGIKGATEAQHLGLFNRTNDGNSSNHVFGVEFDVFKNQEFNDIDENHVGIDVNSLTSVSAHAA  173 (705)
Q Consensus        94 ~~~~~~g~G~aF~~~~~~~~~~~~~g~~lGl~~~~~~~~~~~~~vaVEFDt~~n~~~~d~~~~Hvgidvns~~S~~~~~~  173 (705)
                      .+...+||||||+|+|....+ +..||+||+++..   ...+++|||||||++|.  +||+++|||||+|++.|..+.  
T Consensus        81 ~~~~~~gDGlAFvl~p~~~~~-~~~~g~lG~~~~~---~~~~~~vaVEFDT~~n~--~D~~~~Hvgi~~n~~~s~~~~--  152 (251)
T d1g9fa_          81 PDTKRLADGLAFFLAPIDTKP-QTHAGYLGLFNEN---ESGDQVVAVEFDTFRNS--WDPPNPHIGINVNSIRSIKTT--  152 (251)
T ss_dssp             SCC--CCEEEEEEEEETTCCC-CCCGGGTTTCCTT---SCCCSCEEEEEECC-CT--TSCSSSEEEEEESSSSCSEEE--
T ss_pred             CCCCCCCCceEEEEecCCCCC-CCccCccCccccc---CCCcceEEEEEecccCC--CCCCCCcEeEEecCccccccc--
Confidence            888889999999999986544 5678999998864   34578999999999997  699999999999999987663  


Q ss_pred             cccCCCCCCCCCCCCCCCCCCCccccceeecCCCcceEEEEEe--cCceEEEEEEEccCCCCCCCceeeeecCccccccc
Q 005257          174 GYWPDNQTDSSGSNSNSGTGDDEKSFKELKLNNGKNYQVWIDY--ADSFINITMVEAGMKRPKRPLLSVPLNLSGVLEDE  251 (705)
Q Consensus       174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~I~Y--~~~~~~v~~~~~~~~~~~~~~ls~~vdl~~~l~~~  251 (705)
                                                 .+++.+|+.++|||+|  ..++|+|++...  .+|..|+++..|||+.+|+++
T Consensus       153 ---------------------------~~~l~~g~~~~v~I~Yd~~~~~L~v~l~~~--~~~~~~~l~~~vdL~~~l~~~  203 (251)
T d1g9fa_         153 ---------------------------SWDLANNKVAKVLITYDASTSLLVASLVYP--SQRTSNILSDVVDLKTSLPEW  203 (251)
T ss_dssp             ---------------------------ECCCCTTCCEEEEEEEETTTTEEEEEEEEG--GGTEEEEEEEECCC-CCSCSE
T ss_pred             ---------------------------ceEecCCCEEEEEEEEECCccEEEEEEecC--CCCcceeEEEEecchhhCCCc
Confidence                                       4468899999999999  667888888643  478889999999999999999


Q ss_pred             eeccccccccccc--ccceeeeeeecccc
Q 005257          252 MYVGFTAATGQLV--ESHKILAWSFSNTK  278 (705)
Q Consensus       252 ~~vGfsastg~~~--~~h~i~~wsf~~~~  278 (705)
                      ||||||||||...  |.|+|++|+|+++.
T Consensus       204 ~yvGFSAsTG~~~~~~~h~I~sWsF~s~~  232 (251)
T d1g9fa_         204 VRIGFSAATGLDIPGESHDVLSWSFASNL  232 (251)
T ss_dssp             EEEEEEEEECSSSCCCEEEEEEEEEEEEE
T ss_pred             EEEEEEeecCCCCCCceeEEEEeEeECCC
Confidence            9999999999755  88999999999875

>d1g7ya_ b.29.1.1 (A:) Legume lectin {Horse gram (Dolichos biflorus), different isoforms [TaxId: 3840]}

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Legume lectin
species: Horse gram (Dolichos biflorus), different isoforms [TaxId: 3840]

Probab=100.00  E-value=4.8e-50  Score=408.65  Aligned_cols=221  Identities=32%  Similarity=0.535  Sum_probs=194.8

Q ss_pred             ceeeEEeCCCCCCCeEEEcceEeecCcEEecCCCC------CeEEEEEcCCCccccCCCCCcccceEEEEEEEEecCCCC
Q 005257           24 SAVDFVFNGFNSSNLSLYGTATVESRILTLTNSTT------FTIGRALYPSKIPTKRPNSSYVYPFSTSFIFAMAPYKGV   97 (705)
Q Consensus        24 ~~~~f~f~~f~~~~~~~~g~a~~~~~~l~lt~~~~------~~~Gr~~y~~pv~l~~~~~~~~~sF~t~F~f~i~~~~~~   97 (705)
                      ...+|+|++|++.||+|+|||.+.++.|+||++..      .++|||+|++||+||++.+++++||+|+|+|.|.+.+..
T Consensus         2 ~~~sF~f~~F~~~~l~l~GdA~~~~~~l~LT~~~~~~~~~~~~~G~a~y~~pv~l~~~~~~~~~sF~t~F~F~i~~~~~~   81 (253)
T d1g7ya_           2 DIQSFSFKNFNSSSFILQGDATVSSSKLRLTKVKGNGLPTLSSLGRAFYSSPIQIYDKSTGAVASWATSFTANIFAPNKS   81 (253)
T ss_dssp             EEEEEEESSCCSSCEEEEETCEEETTEEECSCBCTTSCBCSSCEEEEEESSCEECBCTTTCCBCEEEEEEEEECCCSSGG
T ss_pred             cccEEecCCCCcccEEEEeeeEEcCCEEEeCCCCCCCCcccceeEEEEeCCCeEeecCCCCceeeEEEEEEEEEecCCCC
Confidence            46899999999999999999999999999998653      488999999999999999999999999999999888777


Q ss_pred             CCCCceEEEEeeCCCCCCCCCCCcccccccCCCCCCCCcEEEEEeecccCCCCCCCCCCeeEEecCCCcccccccccccC
Q 005257           98 LAGHGLVFLFVPFHGIKGATEAQHLGLFNRTNDGNSSNHVFGVEFDVFKNQEFNDIDENHVGIDVNSLTSVSAHAAGYWP  177 (705)
Q Consensus        98 ~~g~G~aF~~~~~~~~~~~~~g~~lGl~~~~~~~~~~~~~vaVEFDt~~n~~~~d~~~~Hvgidvns~~S~~~~~~~~~~  177 (705)
                      .+||||||+|+|....+ +..||++|+++..+. ...++.|||||||++|.++ ||+++|||||+|++.|.+++      
T Consensus        82 ~ggDGlAF~l~~~~~~~-~~~~g~lgl~~~~~~-~~~~~~vaVEFDT~~n~~~-d~~~~Hvgi~~ns~~s~~~~------  152 (253)
T d1g7ya_          82 SSADGIAFALVPVGSEP-KSNSGFLGVFDSDVY-DNSAQTVAVEFDTFSNTDW-DPTSRHIGIDVNSIKSIRTA------  152 (253)
T ss_dssp             GCCCEEEEEEEETTCCC-CCCGGGTTTCSCSSC-CGGGCCEEEEEECSCCTTT-CCSSCEEEEEESSSSCSEEE------
T ss_pred             CCCCceEEEEeCCCCCC-CCCcccccccccCCC-CCcCceEEEEEeceecCCC-CCCCCcEEEeeCCccccccc------
Confidence            79999999999987654 457889999986543 4567899999999999875 99999999999999987663      


Q ss_pred             CCCCCCCCCCCCCCCCCCccccceeecCCCcceEEEEEe--cCceEEEEEEEccCCCCCCCceeeeecCccccccceecc
Q 005257          178 DNQTDSSGSNSNSGTGDDEKSFKELKLNNGKNYQVWIDY--ADSFINITMVEAGMKRPKRPLLSVPLNLSGVLEDEMYVG  255 (705)
Q Consensus       178 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~I~Y--~~~~~~v~~~~~~~~~~~~~~ls~~vdl~~~l~~~~~vG  255 (705)
                                             ...+.+|+.++|||+|  ..++|.|++..  ..+|..|+++..|||+.+||++||||
T Consensus       153 -----------------------~~~~~~g~~~~v~I~Yd~~~~~L~v~l~~--~~~~~~~~ls~~vdL~~~l~~~~yvG  207 (253)
T d1g7ya_         153 -----------------------SWGLANGQNAEILITYNAATSLLVASLVH--PSRRTSYIVSERVDITNELPEYVSIG  207 (253)
T ss_dssp             -----------------------ECCCCTTSEEEEEEEEETTTTEEEEEEEE--TTTTEEEEEEEECCHHHHSCSEEEEE
T ss_pred             -----------------------CCCccCCCEEEEEEEEeCCcEEEEEEEec--CCCCCceEEEEEechhhcCCCcEEEE
Confidence                                   3467899999999999  66788888764  45788899999999999999999999


Q ss_pred             cccccc---cccccceeeeeeecccc
Q 005257          256 FTAATG---QLVESHKILAWSFSNTK  278 (705)
Q Consensus       256 fsastg---~~~~~h~i~~wsf~~~~  278 (705)
                      ||||||   ...+.|+|++|+|++..
T Consensus       208 FSAsTG~~~~~~~~H~IlsWsF~s~l  233 (253)
T d1g7ya_         208 FSATTGLSEGYTETHDVLSWSFASKL  233 (253)
T ss_dssp             EEEECCSSSSCCCCCEEEEEEEEEEE
T ss_pred             EEeEcCCCCCcccccEEEEEEeEEeC
Confidence            999999   45799999999998753

>d1f9ka_ b.29.1.1 (A:) Legume lectin {Winged bean (Psophocarpus tetragonolobus), acidic lectin [TaxId: 3891]}

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Legume lectin
species: Winged bean (Psophocarpus tetragonolobus), acidic lectin [TaxId: 3891]

Probab=100.00  E-value=7.3e-50  Score=401.71  Aligned_cols=216  Identities=31%  Similarity=0.498  Sum_probs=187.3

Q ss_pred             ceeeEEeCCCC--CCCeEEEcceEee-cCcEEecCCC------CCeEEEEEcCCCccccCCCCCcccceEEEEEEEEecC
Q 005257           24 SAVDFVFNGFN--SSNLSLYGTATVE-SRILTLTNST------TFTIGRALYPSKIPTKRPNSSYVYPFSTSFIFAMAPY   94 (705)
Q Consensus        24 ~~~~f~f~~f~--~~~~~~~g~a~~~-~~~l~lt~~~------~~~~Gr~~y~~pv~l~~~~~~~~~sF~t~F~f~i~~~   94 (705)
                      +++||+|++|.  .+||+|+|||++. +|.|+||+..      .+++|||+|++||+||++.+++++||+|+|+|.|.+.
T Consensus         1 ~~~SF~f~~F~~~~~~l~l~G~A~~~~~g~l~LT~~~~~~~~~~~~~Gra~y~~Pv~l~~~~~~~~~sFsT~F~f~i~~~   80 (234)
T d1f9ka_           1 ETQSFNFDHFEENSKELNLQRQASIKSNGVLELTKLTKNGVPVWKSTGRALYAEPIKIWDSTTGNVASFETRFSFNITQP   80 (234)
T ss_dssp             CEEEEEESSCCSSCTTEEEEETCEECTTSCEECSCSEETTEECCSCEEEEEESSCEECBCTTTCCBCEEEEEEEEEEECC
T ss_pred             CceEEEeCCCCCCCCCEEEeeeEEEcCCCEEEeecCCCCCCcccceeEEEEeCCCEEeeCCCCCcCcceEEEEEEEEECC
Confidence            46899999996  4789999999986 7899999875      3588999999999999999999999999999999765


Q ss_pred             -CCCCCCCceEEEEeeCCCCCCCCCCCcccccccCCCCCCCCcEEEEEeecccCCCCCCCCCCeeEEecCCCcccccccc
Q 005257           95 -KGVLAGHGLVFLFVPFHGIKGATEAQHLGLFNRTNDGNSSNHVFGVEFDVFKNQEFNDIDENHVGIDVNSLTSVSAHAA  173 (705)
Q Consensus        95 -~~~~~g~G~aF~~~~~~~~~~~~~g~~lGl~~~~~~~~~~~~~vaVEFDt~~n~~~~d~~~~Hvgidvns~~S~~~~~~  173 (705)
                       +...+||||||+|+|... |.+..|+++|+++..    ..++.|||||||++|.  +||++||||||+|++.|.++.  
T Consensus        81 ~~~~~g~dG~aF~i~p~~~-~~~~~g~~~g~~~~~----~~~~~vaVEFDT~~n~--~Dp~~nHvgi~~ns~~s~~~~--  151 (234)
T d1f9ka_          81 YAYPEPADGLTFFMVPPNS-PQGEDGGNLGVFKPP----EGDNAFAVEFDTFQNT--WDPQVPHIGIDVNSIVSSKTL--  151 (234)
T ss_dssp             CSSSCCCEEEEEEEECTTC-CCCCSGGGTTTCCSS----CCSCCEEEEEECSCCT--TCCSSSEEEEEESSSSCSEEE--
T ss_pred             CCCCCccceEEEEECCCCC-CcccccccccccCCC----CccceEEEEEeccccC--CCCCCCcEeEecCCccccccc--
Confidence             344678999999999754 667789999998864    3567899999999997  799999999999999887652  


Q ss_pred             cccCCCCCCCCCCCCCCCCCCCccccceeecCCCcceEEEEEe--cCceEEEEEEEccCCCCCCCceeeeecCccccc--
Q 005257          174 GYWPDNQTDSSGSNSNSGTGDDEKSFKELKLNNGKNYQVWIDY--ADSFINITMVEAGMKRPKRPLLSVPLNLSGVLE--  249 (705)
Q Consensus       174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~I~Y--~~~~~~v~~~~~~~~~~~~~~ls~~vdl~~~l~--  249 (705)
                                                 .+.+.+|+.++|||+|  ..++++|+++...  +|..|+|++.|||+.+|+  
T Consensus       152 ---------------------------~~~l~~G~~~~v~I~Yd~~~~~l~V~l~~~~--~~~~~~ls~~idL~~~l~~~  202 (234)
T d1f9ka_         152 ---------------------------HFQLENGGVANVVIKYDSPTKILNVVLAFHS--VGTVYTLSNIVDLKQEFPNS  202 (234)
T ss_dssp             ---------------------------ECCCCTTCCEEEEEEEETTTTEEEEEEEETT--TTEEEEEEEECCHHHHSTTC
T ss_pred             ---------------------------cccccCCCEEEEEEEEcCCCcEEEEEEEeCC--CCccceEEEEEcHHHhcCCC
Confidence                                       4578899999999999  6678888887654  567789999999999997  


Q ss_pred             cceeccccccccc---ccccceeeeeeeccc
Q 005257          250 DEMYVGFTAATGQ---LVESHKILAWSFSNT  277 (705)
Q Consensus       250 ~~~~vGfsastg~---~~~~h~i~~wsf~~~  277 (705)
                      ++||||||||||.   ..|.|+|++|+|+++
T Consensus       203 ~~v~vGFSasTG~~~~~~~~h~I~sWsF~s~  233 (234)
T d1f9ka_         203 EWVNVGLSATTGYQKNAVETHEIISWSFTSS  233 (234)
T ss_dssp             SEEEEEEEEEECSSTTCCCEEEEEEEEEEEE
T ss_pred             CEEEEEEEeecCCCCCceeeeEEEEEEeEEe
Confidence            5699999999994   568999999999975

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.7e-50  Score=414.33  Aligned_cols=246  Identities=23%  Similarity=0.387  Sum_probs=209.6

Q ss_pred             CCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccC---CchhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEEE
Q 005257          364 KGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHE---NDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLV  440 (705)
Q Consensus       364 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~---~~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~lV  440 (705)
                      ++|+..+.||+|+||+||+|+++.+++.||||++...   .....+.+.+|++++++++||||+++++++.+ ++.+++|
T Consensus         6 ~dy~i~~~iG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~-~~~~~iv   84 (263)
T d2j4za1           6 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHD-ATRVYLI   84 (263)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEEC-SSEEEEE
T ss_pred             hHeEEEEEEecCCCcEEEEEEECCCCcEEEEEEEchHHccChHHHHHHHHHHHHHHhcCCCCCCeEEEEEEE-CCEEEEE
Confidence            3588899999999999999999999999999998643   23345678999999999999999999999886 6789999


Q ss_pred             EeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecCC
Q 005257          441 YDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGH  520 (705)
Q Consensus       441 ~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~~  520 (705)
                      |||+++|+|.+++.+..   .+++.++..++.||+.||+|||+   ++|+||||||+|||++.++++||+|||+|+....
T Consensus        85 mEy~~~g~L~~~l~~~~---~l~e~~~~~i~~qi~~al~~lH~---~~ivHrDiKp~Nill~~~~~~kl~DFG~a~~~~~  158 (263)
T d2j4za1          85 LEYAPLGTVYRELQKLS---KFDEQRTATYITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPS  158 (263)
T ss_dssp             EECCTTCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTSCEEECCCCSCSCCCC
T ss_pred             EeecCCCcHHHHHhhcC---CCCHHHHHHHHHHHHHHHHHHHH---CCeeeeeeccccceecCCCCEeecccceeeecCC
Confidence            99999999999997644   69999999999999999999999   9999999999999999999999999999986544


Q ss_pred             CCcceeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhHHHHHhhhcC
Q 005257          521 GQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRAK  600 (705)
Q Consensus       521 ~~~~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~l~~~  600 (705)
                      ..   .....||+.|||||++.+..++.++|||||||++|||++|+.||.....   ......+.++.            
T Consensus       159 ~~---~~~~~Gt~~Y~APE~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~---~~~~~~i~~~~------------  220 (263)
T d2j4za1         159 SR---RTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTY---QETYKRISRVE------------  220 (263)
T ss_dssp             CC---CEETTEEGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSH---HHHHHHHHTTC------------
T ss_pred             Cc---ccccCCCCcccCHHHHcCCCCCchhhhhhHhHHHHHHhcCCCCCCCCCH---HHHHHHHHcCC------------
Confidence            32   2346799999999999999999999999999999999999999976542   12222222221            


Q ss_pred             CCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHH
Q 005257          601 GGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVK  634 (705)
Q Consensus       601 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~  634 (705)
                      ..++....+.+.+++..||++||++|||++|+++
T Consensus       221 ~~~p~~~s~~~~~li~~~L~~dp~~R~t~~eil~  254 (263)
T d2j4za1         221 FTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE  254 (263)
T ss_dssp             CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             CCCCccCCHHHHHHHHHHccCCHhHCcCHHHHHc
Confidence            2233334567889999999999999999999987

>d1g8wa_ b.29.1.1 (A:) Phytohemagglutinin-L, PHA-L, also arcelin {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]}

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Phytohemagglutinin-L, PHA-L, also arcelin
species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]

Probab=100.00  E-value=9.6e-50  Score=400.88  Aligned_cols=218  Identities=34%  Similarity=0.546  Sum_probs=191.7

Q ss_pred             ceeeEEeCCCCCCCeEEEcceEee-cCcEEecCCCC------CeEEEEEcCCCccccCCCCCcccceEEEEEEEEecCCC
Q 005257           24 SAVDFVFNGFNSSNLSLYGTATVE-SRILTLTNSTT------FTIGRALYPSKIPTKRPNSSYVYPFSTSFIFAMAPYKG   96 (705)
Q Consensus        24 ~~~~f~f~~f~~~~~~~~g~a~~~-~~~l~lt~~~~------~~~Gr~~y~~pv~l~~~~~~~~~sF~t~F~f~i~~~~~   96 (705)
                      .+++|+|++|++.||+|+|||++. +|.||||+...      .++|||+|++||+||++.++.++||+|+|+|.|.+.+.
T Consensus         2 ~~~sF~f~~F~~~nl~l~GdA~i~~~g~l~LT~~~~~~~~~~~~~G~~~y~~Pi~l~~~~~~~~~sF~t~f~f~i~~~~~   81 (233)
T d1g8wa_           2 NDIYFNFQRFNETNLILQRDASVSSSGQLRLTNLNGNGEPRVGSLGRAFYSAPIQIWDNTTGTVASFATSFTFNIQVPNN   81 (233)
T ss_dssp             EEEEEEESSCCGGGEEEEETCEECTTSCEECSCCCSTTCCCTTCEEEEEESSCEECBCTTTCCBEEEEEEEEEECCCCSS
T ss_pred             CceEEECCCCCcCcEEEeccEEECCCCEEEecCCCCCCCcccceeEEEEcCCCeEeecCCCCceeeEEEEEEEEEecCCC
Confidence            579999999999999999999986 77999998643      48999999999999999999999999999999998877


Q ss_pred             CCCCCceEEEEeeCCCCCCCCCCCcccccccCCCCCCCCcEEEEEeecccCCCCCCCCCCeeEEecCCCccccccccccc
Q 005257           97 VLAGHGLVFLFVPFHGIKGATEAQHLGLFNRTNDGNSSNHVFGVEFDVFKNQEFNDIDENHVGIDVNSLTSVSAHAAGYW  176 (705)
Q Consensus        97 ~~~g~G~aF~~~~~~~~~~~~~g~~lGl~~~~~~~~~~~~~vaVEFDt~~n~~~~d~~~~Hvgidvns~~S~~~~~~~~~  176 (705)
                      ..+||||||+|+|.... .+..|++||+++..   +..++.|||||||++|.++ ||+.+|||||+|+++|..+.     
T Consensus        82 ~~~gDGlAF~l~~~~~~-~g~~g~~lG~~~g~---~~~~~~vaVEFDT~~N~~~-d~~~~Hvgi~~n~~~s~~~~-----  151 (233)
T d1g8wa_          82 AGPADGLAFALVPVGSQ-PKDKGGFLGLFDGS---NSNFHTVAVEFDTLYNKDW-DPTERHIGIDVNSIRSIKTT-----  151 (233)
T ss_dssp             CBCCEEEEEEEEETTCC-CCCCGGGTTTCCSS---CCCCCCEEEEEECSCCTTT-CCSSCEEEEEESSSSCSEEE-----
T ss_pred             CCCCCeEEEEEecCCCC-CCcccccCCccccC---CCcccEEEEEeecccCCCC-CCCCCeEEEECCCcceeeec-----
Confidence            77899999999998664 45789999998854   4567899999999999875 99999999999999887653     


Q ss_pred             CCCCCCCCCCCCCCCCCCCccccceeecCCCcceEEEEEe--cCceEEEEEEEccCCCCCCCceeeeecCccccccceec
Q 005257          177 PDNQTDSSGSNSNSGTGDDEKSFKELKLNNGKNYQVWIDY--ADSFINITMVEAGMKRPKRPLLSVPLNLSGVLEDEMYV  254 (705)
Q Consensus       177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~I~Y--~~~~~~v~~~~~~~~~~~~~~ls~~vdl~~~l~~~~~v  254 (705)
                                              ...+.+|+.++|||+|  ..+.+.|++...  .+|..|+++..|||+.+||++|||
T Consensus       152 ------------------------~~~~~~g~~~~~~I~yd~~~~~l~v~l~~~--~~~~~~~l~~~vdL~~~l~~~~yv  205 (233)
T d1g8wa_         152 ------------------------RWDFVNGENAEVLITYDSSTNLLVASLVYP--SQKTSFIVSDTVDLKSVLPEWVSV  205 (233)
T ss_dssp             ------------------------ECCCCTTCCEEEEEEEETTTTEEEEEEEET--TTTEEEEEEEECCHHHHSCSEEEE
T ss_pred             ------------------------cccccCCcEEEEEEEEeCCCcEEEEEEEeC--CCCCcEEEEEEechhHcCCCcEEE
Confidence                                    3457899999999999  566888887654  467788999999999999999999


Q ss_pred             cccccccc---ccccceeeeeeeccc
Q 005257          255 GFTAATGQ---LVESHKILAWSFSNT  277 (705)
Q Consensus       255 Gfsastg~---~~~~h~i~~wsf~~~  277 (705)
                      |||||||.   ..|.|+|++|+|+++
T Consensus       206 GFSAsTG~~~~~~~~h~I~sWsFss~  231 (233)
T d1g8wa_         206 GFSATTGINKGNVETNDVLSWSFASK  231 (233)
T ss_dssp             EEEEEECSSTTBCCCCEEEEEEEEEE
T ss_pred             EEEEEcCCCCCCceeeEEEEEEEEEE
Confidence            99999994   568899999999985

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.2e-50  Score=419.47  Aligned_cols=257  Identities=27%  Similarity=0.470  Sum_probs=210.7

Q ss_pred             hCCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCCchhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEEEEe
Q 005257          363 TKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYD  442 (705)
Q Consensus       363 t~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~lV~E  442 (705)
                      .++|+..+.||+|+||+||+|.++ ++..||||+++... ...+.|.+|++++++++|||||+++|+|.+  +.+++|||
T Consensus        12 ~~~~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~-~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~--~~~~iv~E   87 (272)
T d1qpca_          12 RETLKLVERLGAGQFGEVWMGYYN-GHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVVTQ--EPIYIITE   87 (272)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEET-TTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS--SSCEEEEE
T ss_pred             HHHeEEeEEEecCCCcEEEEEEEC-CCCEEEEEEEccCc-CCHHHHHHHHHHHHhCCCCCEeEEEeeecc--CCeEEEEE
Confidence            346778899999999999999987 46889999996543 445789999999999999999999998753  56799999


Q ss_pred             eCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecCCCC
Q 005257          443 YMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQ  522 (705)
Q Consensus       443 ~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~~~~  522 (705)
                      |+++|+|.+++..... ..+++.++++|+.||++||.|||+   ++|+||||||+||||++++.+||+|||+|+......
T Consensus        88 y~~~g~L~~~~~~~~~-~~l~~~~~~~i~~qi~~gl~~lH~---~~ivHrDiKp~NIll~~~~~~Kl~DFGla~~~~~~~  163 (272)
T d1qpca_          88 YMENGSLVDFLKTPSG-IKLTINKLLDMAAQIAEGMAFIEE---RNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNE  163 (272)
T ss_dssp             CCTTCBHHHHTTSHHH-HTCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTSCEEECCCTTCEECSSSC
T ss_pred             eCCCCcHHHHHhhcCC-CCCCHHHHHHHHHHHHHHHHHHHh---CCcccCccchhheeeecccceeeccccceEEccCCc
Confidence            9999999998754332 258999999999999999999998   999999999999999999999999999999876555


Q ss_pred             cceeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhHHHHHhhhcCCC
Q 005257          523 VASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRAKGG  602 (705)
Q Consensus       523 ~~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~l~~~~~  602 (705)
                      ........||+.|||||++.++.++.++|||||||++|||+||..|+......  ..+...+..+.         +  ..
T Consensus       164 ~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwS~Gvvl~ellt~~~~~~~~~~~--~~~~~~i~~~~---------~--~~  230 (272)
T d1qpca_         164 YTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTN--PEVIQNLERGY---------R--MV  230 (272)
T ss_dssp             EECCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCH--HHHHHHHHTTC---------C--CC
T ss_pred             cccccccCCcccccChHHHhCCCCCchhhhhhhHHHHHHHHhCCCCCCCCCCH--HHHHHHHHhcC---------C--CC
Confidence            44444567899999999999889999999999999999999976665443321  12222222221         1  12


Q ss_pred             CCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHhcc
Q 005257          603 FDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLEGKI  640 (705)
Q Consensus       603 ~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~  640 (705)
                      .+....+.+.+++..||+.||++||||.+|++.|+...
T Consensus       231 ~p~~~~~~l~~li~~cl~~~P~~Rpt~~ei~~~L~~~f  268 (272)
T d1qpca_         231 RPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFF  268 (272)
T ss_dssp             CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             CcccChHHHHHHHHHHcCCCHhHCcCHHHHHHHhhhhh
Confidence            23344567889999999999999999999999998543

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.2e-50  Score=422.53  Aligned_cols=249  Identities=22%  Similarity=0.345  Sum_probs=207.2

Q ss_pred             CCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccC---CchhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEEE
Q 005257          364 KGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHE---NDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLV  440 (705)
Q Consensus       364 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~---~~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~lV  440 (705)
                      ++|+..+.||+|+||+||+|.+..+++.||||++...   .....+.+.+|++++++++||||+++++++.+ ++.+++|
T Consensus         8 ~dy~i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~-~~~~~iv   86 (288)
T d1uu3a_           8 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQD-DEKLYFG   86 (288)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCSTTBCCEEEEEEC-SSEEEEE
T ss_pred             CCCEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccCHHHHHHHHHHHHHHHHcCCCCeeEEEEEEEE-CCEEEEE
Confidence            4588899999999999999999999999999998653   23345679999999999999999999998876 6789999


Q ss_pred             EeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecCC
Q 005257          441 YDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGH  520 (705)
Q Consensus       441 ~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~~  520 (705)
                      |||+++|+|.+++...+   .+++.++..++.|++.||+|||+   ++|+||||||+|||+++++.+||+|||+|+....
T Consensus        87 mEy~~gg~L~~~~~~~~---~l~e~~~~~~~~qi~~al~ylH~---~~iiHrDiKp~NIll~~~~~vkl~DFG~a~~~~~  160 (288)
T d1uu3a_          87 LSYAKNGELLKYIRKIG---SFDETCTRFYTAEIVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSP  160 (288)
T ss_dssp             ECCCTTEEHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTSCEEECCCTTCEECC-
T ss_pred             EEccCCCCHHHhhhccC---CCCHHHHHHHHHHHHHHHHhhcc---ccEEcCcCCccccccCCCceEEecccccceeccc
Confidence            99999999999987654   69999999999999999999999   9999999999999999999999999999998754


Q ss_pred             CCc-ceeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhHHHHHhhhc
Q 005257          521 GQV-ASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRA  599 (705)
Q Consensus       521 ~~~-~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~l~~  599 (705)
                      ... ......+||+.|||||++.+..++.++|||||||++|||++|+.||......   .+...+..+.           
T Consensus       161 ~~~~~~~~~~~GT~~Y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~---~~~~~i~~~~-----------  226 (288)
T d1uu3a_         161 ESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEY---LIFQKIIKLE-----------  226 (288)
T ss_dssp             ---------CCCCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHH---HHHHHHHTTC-----------
T ss_pred             CCcccccccccCCccccCceeeccCCCCcccceehhhHHHHHHhhCCCCCCCcCHH---HHHHHHHcCC-----------
Confidence            332 2334468999999999999999999999999999999999999999865431   1222222221           


Q ss_pred             CCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHH
Q 005257          600 KGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVK  634 (705)
Q Consensus       600 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~  634 (705)
                       ..++....+.+.+++..||+.||++|||++|+++
T Consensus       227 -~~~p~~~s~~~~~li~~~L~~dP~~R~t~~e~~~  260 (288)
T d1uu3a_         227 -YDFPEKFFPKARDLVEKLLVLDATKRLGCEEMEG  260 (288)
T ss_dssp             -CCCCTTCCHHHHHHHHTTSCSSGGGSTTSGGGTC
T ss_pred             -CCCCccCCHHHHHHHHHHccCCHhHCcCHHHHcC
Confidence             2233334566889999999999999999988754

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.2e-50  Score=416.48  Aligned_cols=256  Identities=23%  Similarity=0.347  Sum_probs=198.5

Q ss_pred             CCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCC--chhHHHHHHHHHHhccCCCCCcceeeeeeeec-cCceEEE
Q 005257          364 KGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHEN--DGGTRAFLAEISSLGRLKHKSLVGLRGWCKRE-KGSLMLV  440 (705)
Q Consensus       364 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~--~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~-~~~~~lV  440 (705)
                      ++|+..+.||+|+||+||+|+++.+|+.||||++....  ....+.+.+|++++++++||||+++++++.++ .+.+++|
T Consensus         4 edy~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~~~iv   83 (269)
T d2java1           4 EDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIV   83 (269)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCTTSCHHHHHHHHHHHHHTTSCCCTTBCCEEEEEEC----CEEEE
T ss_pred             hhCEEeEEEecCCCeEEEEEEECCCCCEEEEEEEChhhCCHHHHHHHHHHHHHHHHCCCCCEeeEEEEEEeCCCCEEEEE
Confidence            56888999999999999999999999999999997653  34456789999999999999999999988643 4568999


Q ss_pred             EeeCCCCChhHHHHhcC-CCCcccHHHHHHHHHHHHHHHHHHhcCC--CCCeeecCCCCCCeEEccCCCeeeeeecccee
Q 005257          441 YDYMENGSLDKWIFQCD-GSMMLSCEERIRVLKDVAAGVLYLHEGW--EKKVLHRDIKSSNVLLDKEMNGRLGDFGLARM  517 (705)
Q Consensus       441 ~E~~~~gsL~~~L~~~~-~~~~l~~~~~~~i~~qia~gL~yLH~~~--~~~iiHrDLkp~NILld~~~~~kL~DFGla~~  517 (705)
                      |||+++|+|.+++.+.. ....+++.+++.++.|++.||.|||+..  ..+|+||||||+|||++.++.+||+|||+|+.
T Consensus        84 mEy~~~g~L~~~i~~~~~~~~~l~e~~~~~i~~qi~~al~ylH~~~~~~~~IiHrDiKp~NIll~~~~~vkl~DFG~a~~  163 (269)
T d2java1          84 MEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARI  163 (269)
T ss_dssp             EECCTTEEHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHHCC---------CCGGGEEECTTSCEEECCHHHHHH
T ss_pred             EecCCCCcHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCEEeCcCchhhcCcCCCCcEEEeeccceee
Confidence            99999999999986532 2336999999999999999999999721  13499999999999999999999999999987


Q ss_pred             cCCCCcceeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhHHHHHhh
Q 005257          518 HGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDARL  597 (705)
Q Consensus       518 ~~~~~~~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~l  597 (705)
                      ...... .....+||+.|||||++.+..++.++|||||||++|||+||+.||.....   ..+...+..+..        
T Consensus       164 ~~~~~~-~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyel~tg~~Pf~~~~~---~~~~~~i~~~~~--------  231 (269)
T d2java1         164 LNHDTS-FAKAFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQ---KELAGKIREGKF--------  231 (269)
T ss_dssp             C------------CCCSCCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSH---HHHHHHHHHTCC--------
T ss_pred             cccCCC-ccccCCCCcccCCHHHHcCCCCChHHHHHhhCHHHHHHhhCCCCCCCCCH---HHHHHHHHcCCC--------
Confidence            754332 23446899999999999999999999999999999999999999976543   122223333322        


Q ss_pred             hcCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHH
Q 005257          598 RAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVK  634 (705)
Q Consensus       598 ~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~  634 (705)
                         ...+....+.+.+++.+||+.||++|||+.|+++
T Consensus       232 ---~~~~~~~s~~l~~li~~~L~~dp~~Rps~~ell~  265 (269)
T d2java1         232 ---RRIPYRYSDELNEIITRMLNLKDYHRPSVEEILE  265 (269)
T ss_dssp             ---CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             ---CCCCcccCHHHHHHHHHHcCCChhHCcCHHHHHh
Confidence               1122334456889999999999999999999876

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=8.3e-50  Score=416.86  Aligned_cols=251  Identities=23%  Similarity=0.380  Sum_probs=212.3

Q ss_pred             CCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCCchhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEEEEee
Q 005257          364 KGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDY  443 (705)
Q Consensus       364 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~lV~E~  443 (705)
                      ++|+..+.||+|+||+||+|.+..+|+.||||+++.......+.+.+|++++++++||||+++++++.. ++.+++||||
T Consensus        20 ~~Y~~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~-~~~~~ivmEy   98 (293)
T d1yhwa1          20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLV-GDELWVVMEY   98 (293)
T ss_dssp             TTBCSCEECCCSSSCEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEE-TTEEEEEEEC
T ss_pred             cccEEEEEEecCcCcEEEEEEECCCCCEEEEEEEecccChHHHHHHHHHHHHHhCCCCCEeeEeEEEEE-CCEEEEEEEe
Confidence            579999999999999999999999999999999987665667789999999999999999999999886 6789999999


Q ss_pred             CCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecCCCCc
Q 005257          444 MENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQV  523 (705)
Q Consensus       444 ~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~~~~~  523 (705)
                      +++|+|.+++.+.    .+++.++..++.||+.||.|||+   ++|+||||||+|||++.++++||+|||+|+.......
T Consensus        99 ~~gg~L~~~~~~~----~l~~~~~~~i~~qi~~aL~yLH~---~~iiHrDiKp~NILl~~~~~vkl~DFG~a~~~~~~~~  171 (293)
T d1yhwa1          99 LAGGSLTDVVTET----CMDEGQIAAVCRECLQALEFLHS---NQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS  171 (293)
T ss_dssp             CTTCBHHHHHHHS----CCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTCCEEECCCTTCEECCSTTC
T ss_pred             cCCCcHHHHhhcc----CCCHHHHHHHHHHHHHHHHHHHH---CCCcccCCcHHHeEECCCCcEeeccchhheeeccccc
Confidence            9999999988652    58999999999999999999999   9999999999999999999999999999997754433


Q ss_pred             ceeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhHHHHHhhhcCCCC
Q 005257          524 ASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRAKGGF  603 (705)
Q Consensus       524 ~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~l~~~~~~  603 (705)
                       .....+||+.|||||++.+..++.++|||||||++|||++|+.||.+...  .+........+..          ....
T Consensus       172 -~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~--~~~~~~~~~~~~~----------~~~~  238 (293)
T d1yhwa1         172 -KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENP--LRALYLIATNGTP----------ELQN  238 (293)
T ss_dssp             -CBCCCCSCGGGCCHHHHSSSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH--HHHHHHHHHHCSC----------CCSS
T ss_pred             -cccccccCCCccChhhhcCCCCCchhceehHhHHHHHHhhCCCCCCCCCH--HHHHHHHHhCCCC----------CCCC
Confidence             23346899999999999999999999999999999999999999976542  1222222221110          0112


Q ss_pred             CHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 005257          604 DEDEVERVLHLGLLCAYPDPRARPTMRQVVKV  635 (705)
Q Consensus       604 ~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  635 (705)
                      +......+.+++.+||++||++|||+.|++++
T Consensus       239 ~~~~s~~~~~li~~~L~~dP~~R~s~~eil~H  270 (293)
T d1yhwa1         239 PEKLSAIFRDFLNRCLDMDVEKRGSAKELLQH  270 (293)
T ss_dssp             GGGSCHHHHHHHHHHTCSSTTTSCCHHHHTTC
T ss_pred             cccCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence            22334678899999999999999999999863

>d1dbna_ b.29.1.1 (A:) Legume lectin {Maackia amurensis, leukoagglutinin [TaxId: 37501]}

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Legume lectin
species: Maackia amurensis, leukoagglutinin [TaxId: 37501]

Probab=100.00  E-value=3.4e-49  Score=399.79  Aligned_cols=223  Identities=31%  Similarity=0.533  Sum_probs=192.9

Q ss_pred             CceeeEEeCCCCC--CCeEEEcceEee-cCcEEecCCC-----CCeEEEEEcCCCccccCCCCCcccceEEEEEEEEecC
Q 005257           23 ISAVDFVFNGFNS--SNLSLYGTATVE-SRILTLTNST-----TFTIGRALYPSKIPTKRPNSSYVYPFSTSFIFAMAPY   94 (705)
Q Consensus        23 ~~~~~f~f~~f~~--~~~~~~g~a~~~-~~~l~lt~~~-----~~~~Gr~~y~~pv~l~~~~~~~~~sF~t~F~f~i~~~   94 (705)
                      +++++|+|++|.+  .||+|+|||++. +|.||||++.     +.++|||+|++||+||++.+++++||+|+|+|.|.+.
T Consensus         1 ~~~~sF~f~~F~~~~~~l~l~G~A~v~~~g~l~LT~~~~~~~~~~~~G~a~y~~pi~l~~~~~~~~~sFst~F~F~i~~~   80 (239)
T d1dbna_           1 SDELSFTINNFVPNEADLLFQGEASVSSTGVLQLTKVENGQPQKYSVGRALYAAPVRIWGNTTGSVASFSTSFTFVVKAP   80 (239)
T ss_dssp             CCEEEEEESSCCTTCTTEEEEETCEECTTSCEESSCEETTEECSSCEEEEEESSCEECBCTTTCCBCEEEEEEEEECCCS
T ss_pred             CCceEEEeCCCCCCCCCEEEeeeeEECCCCEEEccCCCCCCcccceeEEEeecCCEEccCCCCccceEEEEEEEEEEECC
Confidence            3579999999964  789999999987 6799999864     4678999999999999999999999999999999888


Q ss_pred             CCCCCCCceEEEEeeCCC-CCCCCCCCcccccccCCCCCCCCcEEEEEeecccCCCCC--CCCCCeeEEecCCCcccccc
Q 005257           95 KGVLAGHGLVFLFVPFHG-IKGATEAQHLGLFNRTNDGNSSNHVFGVEFDVFKNQEFN--DIDENHVGIDVNSLTSVSAH  171 (705)
Q Consensus        95 ~~~~~g~G~aF~~~~~~~-~~~~~~g~~lGl~~~~~~~~~~~~~vaVEFDt~~n~~~~--d~~~~Hvgidvns~~S~~~~  171 (705)
                      ....+||||||+|+|... .+.++.|++||+++..+ .+..++.+||||||++|.+++  ||+++|||||+|++.|.++.
T Consensus        81 ~~~~~gdG~AF~l~~~~~~~~~~~~g~~lGl~~~~~-~~~~~~~~aVEfDT~~n~~~~~~d~~~~hvgid~n~~~s~~~~  159 (239)
T d1dbna_          81 NPDITSDGLAFYLAPPDSQIPSGSVSKYLGLFNNSN-SDSSNQIVAVEFDTYFAHSYDPWDPNYRHIGIDVNGIESIKTV  159 (239)
T ss_dssp             STTSCCEEEEEEEECTTCCCCSSSCGGGTTSCSSSC-CCTTSCCEEEEEECCCCTTTCTTSCSSCEEEEEESSSSCSEEE
T ss_pred             CCCCCCCCEEEEEeCCCccCCcccCccccccccccC-CCcccCeeeeEEeeeecCCCCCCCCCCceeeEEcCCccccccc
Confidence            777899999999999764 56678899999998654 467789999999999998764  78999999999999987664


Q ss_pred             cccccCCCCCCCCCCCCCCCCCCCccccceeecCCCcceEEEEEe--cCceEEEEEEEccCCCCCCCceeeeecCccccc
Q 005257          172 AAGYWPDNQTDSSGSNSNSGTGDDEKSFKELKLNNGKNYQVWIDY--ADSFINITMVEAGMKRPKRPLLSVPLNLSGVLE  249 (705)
Q Consensus       172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~I~Y--~~~~~~v~~~~~~~~~~~~~~ls~~vdl~~~l~  249 (705)
                      +                             ..+.+|+.+.|||+|  ..+.+.|++..  ..+|..|.++..|||+.+||
T Consensus       160 ~-----------------------------~~~~~g~~~~~~i~y~~~~~~l~v~l~~--~~~~~~~~ls~~vdL~~~l~  208 (239)
T d1dbna_         160 Q-----------------------------WDWINGGVAFATITYLAPNKTLIASLVY--PSNQTTFSVAASVDLKEILP  208 (239)
T ss_dssp             E-----------------------------CCCCTTCCEEEEEEEEGGGTEEEEEEEE--TTTTEEEEEEEECCHHHHSC
T ss_pred             c-----------------------------ceEeCCceeEEEEEEcCCCCEEEEEEEe--cCCCccEEEEEecchHHhcC
Confidence            3                             245688899999999  56778887765  34677888999999999999


Q ss_pred             cceecccccccccc--cccceeeeeeeccc
Q 005257          250 DEMYVGFTAATGQL--VESHKILAWSFSNT  277 (705)
Q Consensus       250 ~~~~vGfsastg~~--~~~h~i~~wsf~~~  277 (705)
                      ++||||||||||..  .|.|+|++|+|+++
T Consensus       209 ~~vyvGFSAsTG~~~~~~~H~I~sWsFss~  238 (239)
T d1dbna_         209 EWVRVGFSAATGYPTEVETHDVLSWSFTST  238 (239)
T ss_dssp             SEEEEEEEEEECSGGGCCCCEEEEEEEEEE
T ss_pred             CcEEEEEEEeCCCCCCcceeEEEEEEeEEe
Confidence            99999999999964  57899999999975

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=7e-50  Score=412.92  Aligned_cols=252  Identities=25%  Similarity=0.327  Sum_probs=204.1

Q ss_pred             CCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCCc-hhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEEEEe
Q 005257          364 KGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHEND-GGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYD  442 (705)
Q Consensus       364 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~-~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~lV~E  442 (705)
                      ++|+..+.||+|+||+||+|+++.+++.||||+++.... +..+.+.+|++++++++||||+++++++.+ ++.++||||
T Consensus         5 ~dy~~~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~~~~~~~~-~~~~~ivmE   83 (271)
T d1nvra_           5 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRRE-GNIQYLFLE   83 (271)
T ss_dssp             TEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHTCCCTTBCCEEEEEEE-TTEEEEEEE
T ss_pred             cceEEEEEEecCcCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHhCCCCCEeeEeeeecc-CceeEEEEe
Confidence            468889999999999999999999999999999976532 344678999999999999999999999886 678999999


Q ss_pred             eCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecCCCC
Q 005257          443 YMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQ  522 (705)
Q Consensus       443 ~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~~~~  522 (705)
                      |+++|+|.+++...   ..+++.++..++.||+.||+|||+   ++|+||||||+|||+++++++||+|||+|+......
T Consensus        84 y~~gg~L~~~l~~~---~~l~e~~~~~i~~qi~~al~ylH~---~~IiHrDiKp~NILl~~~~~~KL~DFG~a~~~~~~~  157 (271)
T d1nvra_          84 YCSGGELFDRIEPD---IGMPEPDAQRFFHQLMAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNN  157 (271)
T ss_dssp             CCTTEEGGGGSBTT---TBCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEECTTCCEEECCCTTCEECEETT
T ss_pred             ccCCCcHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHHH---cCCccCcccHHHEEECCCCCEEEccchhheeeccCC
Confidence            99999999999643   279999999999999999999998   999999999999999999999999999998765433


Q ss_pred             c-ceeeeeeccccCCCccccccCCC-CccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhHHHHHhhhcC
Q 005257          523 V-ASTTRVVGTVGYLAPEVFSSGRA-STQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRAK  600 (705)
Q Consensus       523 ~-~~~~~~~gt~~y~APE~~~~~~~-s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~l~~~  600 (705)
                      . ......+||+.|||||++.+..+ +.++|||||||++|||++|+.||..........  .........          
T Consensus       158 ~~~~~~~~~GT~~Y~APE~~~~~~~~~~~~DiwSlGvilyeml~G~~pf~~~~~~~~~~--~~~~~~~~~----------  225 (271)
T d1nvra_         158 RERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEY--SDWKEKKTY----------  225 (271)
T ss_dssp             EECCBCCCCSCGGGSCTHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSSTTSHHH--HHHHTTCTT----------
T ss_pred             ccccccceeeCcCccCHhHhcCCCCCCCceeeeHhHHHHHHHHhCCCCCCCCChHHHHH--HHHhcCCCC----------
Confidence            2 22345689999999999988775 678999999999999999999997644321111  111111100          


Q ss_pred             CCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHH
Q 005257          601 GGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVK  634 (705)
Q Consensus       601 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~  634 (705)
                      ..........+.+++.+||+.||++|||++|+++
T Consensus       226 ~~~~~~~s~~~~~li~~~L~~dP~~R~t~~eil~  259 (271)
T d1nvra_         226 LNPWKKIDSAPLALLHKILVENPSARITIPDIKK  259 (271)
T ss_dssp             STTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred             CCccccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence            0111122356778999999999999999999876

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.3e-49  Score=414.05  Aligned_cols=259  Identities=28%  Similarity=0.480  Sum_probs=205.4

Q ss_pred             CCCCcceEEeecCceEEEEEEEcCCC----eEEEEEEeccCCc-hhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceE
Q 005257          364 KGFSEENVIGVGGNGKVYKGVLEGGG----AEIAVKRISHEND-GGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLM  438 (705)
Q Consensus       364 ~~f~~~~~LG~G~fg~Vy~~~~~~~~----~~vavK~i~~~~~-~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~  438 (705)
                      +.|+..++||+|+||+||+|.++.++    ..||||+++.... ....+|++|++++++++|||||+++|+|.. .+.++
T Consensus         7 ~~~~~~~~iG~G~fG~Vy~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~H~nIv~~~g~~~~-~~~~~   85 (283)
T d1mqba_           7 SCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISK-YKPMM   85 (283)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECS-SSSEE
T ss_pred             HHeEeeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEEECcccChHHHHHHHHHHHHHHhcCCCCEeeeeEEEec-CCceE
Confidence            45778899999999999999987654    4799999976533 345679999999999999999999999976 67889


Q ss_pred             EEEeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceec
Q 005257          439 LVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMH  518 (705)
Q Consensus       439 lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~  518 (705)
                      +||||+.+|+|.+++.....  .+++.++++++.|++.||.|||+   ++|+||||||+||||+.++.+||+|||+++..
T Consensus        86 ~v~e~~~~~~l~~~~~~~~~--~~~~~~~~~i~~~i~~gl~~lH~---~~iiHrDlKp~NILl~~~~~~Kl~DFGla~~~  160 (283)
T d1mqba_          86 IITEYMENGALDKFLREKDG--EFSVLQLVGMLRGIAAGMKYLAN---MNYVHRDLAARNILVNSNLVCKVSDFGLSRVL  160 (283)
T ss_dssp             EEEECCTTEEHHHHHHHTTT--CSCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTCCEEECCCCC----
T ss_pred             EEEEecccCcchhhhhcccc--cccHHHHHHHHHHHHHhhhhccc---cccccCccccceEEECCCCeEEEcccchhhcc
Confidence            99999999999998876443  69999999999999999999999   99999999999999999999999999999876


Q ss_pred             CCCCcc--eeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhHHHHHh
Q 005257          519 GHGQVA--STTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDAR  596 (705)
Q Consensus       519 ~~~~~~--~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~  596 (705)
                      ......  ......||+.|||||++.++.++.++|||||||++|||++|..|+......  ..+...+..+         
T Consensus       161 ~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~sDI~S~Gvil~el~t~~~~~~~~~~~--~~~~~~i~~~---------  229 (283)
T d1mqba_         161 EDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSN--HEVMKAINDG---------  229 (283)
T ss_dssp             -------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCH--HHHHHHHHTT---------
T ss_pred             cCCCccceEeccCCCCccccCHHHHccCCCCCcccccccHHHHHHHHhCCCCccccCCH--HHHHHHHhcc---------
Confidence            543222  223356899999999999999999999999999999999976666543321  2222223222         


Q ss_pred             hhcCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHhccc
Q 005257          597 LRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLEGKIE  641 (705)
Q Consensus       597 l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~  641 (705)
                      .+  ...+.+.+..+.+|+.+||+.||++||||.||++.|+.+.+
T Consensus       230 ~~--~~~~~~~~~~l~~li~~cl~~~p~~RPt~~eil~~L~~l~~  272 (283)
T d1mqba_         230 FR--LPTPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKLIR  272 (283)
T ss_dssp             CC--CCCCTTCBHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHH
T ss_pred             CC--CCCchhhHHHHHHHHHHHCcCCHhHCcCHHHHHHHHHHHhh
Confidence            11  23344456778999999999999999999999999987765

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=8.6e-50  Score=416.08  Aligned_cols=253  Identities=22%  Similarity=0.299  Sum_probs=209.8

Q ss_pred             CCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCCchhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEEEEee
Q 005257          364 KGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDY  443 (705)
Q Consensus       364 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~lV~E~  443 (705)
                      +.|+..+.||+|+||+||+|.+..+++.||||+++.......+.+.+|+++|++++||||+++++++.. ++.+++||||
T Consensus        12 d~Y~i~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~-~~~~~lvmEy   90 (288)
T d2jfla1          12 DFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYY-ENNLWILIEF   90 (288)
T ss_dssp             GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECSSSGGGGGTHHHHHHHHHCCCTTBCCEEEEEEE-TTEEEEEEEC
T ss_pred             cCeEEeEEEeeCCCcEEEEEEECCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEee-CCeEEEEEec
Confidence            357889999999999999999999999999999987777777889999999999999999999999886 6789999999


Q ss_pred             CCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecCCCCc
Q 005257          444 MENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQV  523 (705)
Q Consensus       444 ~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~~~~~  523 (705)
                      +++|+|.+++.+...  .+++.++..++.||+.||.|||+   ++|+||||||+|||++.++++||+|||+|+.......
T Consensus        91 ~~~g~L~~~~~~~~~--~l~e~~~~~i~~qi~~gL~ylH~---~~ivHrDiKp~NIll~~~~~~Kl~DFG~a~~~~~~~~  165 (288)
T d2jfla1          91 CAGGAVDAVMLELER--PLTESQIQVVCKQTLDALNYLHD---NKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQ  165 (288)
T ss_dssp             CTTEEHHHHHHHHTS--CCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCCTTCEECHHHHH
T ss_pred             CCCCcHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHH---CCEEEeecChhheeECCCCCEEEEechhhhccCCCcc
Confidence            999999999876433  69999999999999999999998   9999999999999999999999999999976533211


Q ss_pred             ceeeeeeccccCCCccccc-----cCCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhHHHHHhhh
Q 005257          524 ASTTRVVGTVGYLAPEVFS-----SGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDARLR  598 (705)
Q Consensus       524 ~~~~~~~gt~~y~APE~~~-----~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~l~  598 (705)
                       ......||+.|||||++.     ...++.++|||||||++|||++|+.||.......  . ...+..+...        
T Consensus       166 -~~~~~~Gt~~y~APE~l~~~~~~~~~y~~k~DiwSlGvilyemltg~~Pf~~~~~~~--~-~~~i~~~~~~--------  233 (288)
T d2jfla1         166 -RRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMR--V-LLKIAKSEPP--------  233 (288)
T ss_dssp             -HHTCCCSCCTTCCHHHHTTCSTTTSSTTTHHHHHHHHHHHHHHHHSSCTTTTSCGGG--H-HHHHHHSCCC--------
T ss_pred             -cccccccccccCCHHHHhhcccCCCCCChhhhHHHHHHHHHHHhhCCCCCCCCCHHH--H-HHHHHcCCCC--------
Confidence             223468999999999984     4568899999999999999999999998654321  1 1111111110        


Q ss_pred             cCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 005257          599 AKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKV  635 (705)
Q Consensus       599 ~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  635 (705)
                       ....+......+.+++..||+.||++|||+.|++++
T Consensus       234 -~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~ell~h  269 (288)
T d2jfla1         234 -TLAQPSRWSSNFKDFLKKCLEKNVDARWTTSQLLQH  269 (288)
T ss_dssp             -CCSSGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTS
T ss_pred             -CCCccccCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence             011122344678899999999999999999999873

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5e-49  Score=408.18  Aligned_cols=248  Identities=28%  Similarity=0.407  Sum_probs=203.5

Q ss_pred             eEEeecCceEEEEEEEcC--CCeEEEEEEeccC--CchhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEEEEeeCC
Q 005257          370 NVIGVGGNGKVYKGVLEG--GGAEIAVKRISHE--NDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYME  445 (705)
Q Consensus       370 ~~LG~G~fg~Vy~~~~~~--~~~~vavK~i~~~--~~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~lV~E~~~  445 (705)
                      ++||+|+||+||+|.++.  .++.||||+++..  .....++|.+|+++|++++||||++++++|..  +..+|||||++
T Consensus        13 k~iG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~g~~~~--~~~~lvmE~~~   90 (277)
T d1xbba_          13 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEA--ESWMLVMEMAE   90 (277)
T ss_dssp             EEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEEES--SSEEEEEECCT
T ss_pred             CCcccCCCeEEEEEEEccCCcCeEEEEEEEChhhCCHHHHHHHHHHHHHHHhCCCCCCceEEEEecc--CCEEEEEEcCC
Confidence            579999999999998753  4578999999654  33345789999999999999999999999853  46789999999


Q ss_pred             CCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecCCCCcce
Q 005257          446 NGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVAS  525 (705)
Q Consensus       446 ~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~~~~~~~  525 (705)
                      +|+|.+++.+..   .+++.++++++.||+.||+|||+   ++|+||||||+|||++.++.+||+|||+++.........
T Consensus        91 ~g~L~~~l~~~~---~l~~~~~~~i~~qi~~gl~ylH~---~~iiHrDlKp~Nill~~~~~~kl~DFGla~~~~~~~~~~  164 (277)
T d1xbba_          91 LGPLNKYLQQNR---HVKDKNIIELVHQVSMGMKYLEE---SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYY  164 (277)
T ss_dssp             TEEHHHHHHHCT---TCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEEETTEEEECCCTTCEECCTTCSEE
T ss_pred             CCcHHHHHhhcc---CCCHHHHHHHHHHHHHHHhhHHh---CCcccCCCcchhhcccccCcccccchhhhhhcccccccc
Confidence            999999997643   69999999999999999999998   999999999999999999999999999999775543322


Q ss_pred             --eeeeeccccCCCccccccCCCCccccEEEEehhHHHHhh-CCCCCCCCCccHHHHHHHHHHhCchhHHHHHhhhcCCC
Q 005257          526 --TTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLS-GRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRAKGG  602 (705)
Q Consensus       526 --~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~Ellt-G~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~l~~~~~  602 (705)
                        .....||+.|||||++.+..++.++|||||||++|||+| |+.||.+...   ..+...+..+..           ..
T Consensus       165 ~~~~~~~gt~~y~APE~l~~~~~~~~sDiwS~Gv~l~ellt~g~~Pf~~~~~---~~~~~~i~~~~~-----------~~  230 (277)
T d1xbba_         165 KAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKG---SEVTAMLEKGER-----------MG  230 (277)
T ss_dssp             EC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCH---HHHHHHHHTTCC-----------CC
T ss_pred             ccccccCCCceecCchhhcCCCCCchhhhccchhhhhHHhhCCCCCCCCCCH---HHHHHHHHcCCC-----------CC
Confidence              233578999999999999999999999999999999998 8999986543   222233333321           22


Q ss_pred             CCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHhc
Q 005257          603 FDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLEGK  639 (705)
Q Consensus       603 ~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~  639 (705)
                      .+...+..+.+++.+||+.||++|||+.+|++.|+..
T Consensus       231 ~p~~~~~~~~~li~~cl~~dp~~RPs~~~i~~~L~~~  267 (277)
T d1xbba_         231 CPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNY  267 (277)
T ss_dssp             CCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHH
T ss_pred             CCcccCHHHHHHHHHHcCCCHhHCcCHHHHHHHhhCH
Confidence            3334456788999999999999999999999988754

>d1v6ia_ b.29.1.1 (A:) Legume lectin {Peanut (Arachis hypogaea) [TaxId: 3818]}

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Legume lectin
species: Peanut (Arachis hypogaea) [TaxId: 3818]

Probab=100.00  E-value=1.9e-48  Score=391.98  Aligned_cols=222  Identities=28%  Similarity=0.421  Sum_probs=187.3

Q ss_pred             CceeeEEeCCCCC--CCeEEEcceEee-cCcEEecCCC-CCeEEEEEcCCCccccCCCCCcccceEEEEEEEEecCCCCC
Q 005257           23 ISAVDFVFNGFNS--SNLSLYGTATVE-SRILTLTNST-TFTIGRALYPSKIPTKRPNSSYVYPFSTSFIFAMAPYKGVL   98 (705)
Q Consensus        23 ~~~~~f~f~~f~~--~~~~~~g~a~~~-~~~l~lt~~~-~~~~Gr~~y~~pv~l~~~~~~~~~sF~t~F~f~i~~~~~~~   98 (705)
                      +++++|+|++|.+  .+|+|+|||.+. ++.||||++. .+++|||+|++||+||++.+++++||+|+|+|.|.+.+...
T Consensus         1 a~~~sF~~~~F~~~~~~l~l~GdA~i~~~g~l~LT~~~~~~~~G~a~y~~Pi~l~~~~~~~~~sf~t~f~f~i~~~~~~~   80 (232)
T d1v6ia_           1 AETVSFNFNSFSEGNPAINFQGDVTVLSNGNIQLTNLNKVNSVGRVLYAMPVRIWSSATGNVASFLTSFSFEMKDIKDYD   80 (232)
T ss_dssp             CEEEEEEESSCCTTCTTEEEEESCEECTTSCEECSCTTSTTCEEEEEESSCEECBCTTTCCBCEEEEEEEEEEECCSSSB
T ss_pred             CccEEEECCCCCCCCCCEEEeeeeEEcCCCEEEeCCCCCCCceEEEEcCCCEEccCCCCCccceeEEEEEEEeccCCCCC
Confidence            3579999999986  459999999986 6799999965 48999999999999999999999999999999999888788


Q ss_pred             CCCceEEEEeeCCCCCCCCCCCcccccccCCCCCCCCcEEEEEeecccCCCCCCCCCCeeEEecCCCcccccccccccCC
Q 005257           99 AGHGLVFLFVPFHGIKGATEAQHLGLFNRTNDGNSSNHVFGVEFDVFKNQEFNDIDENHVGIDVNSLTSVSAHAAGYWPD  178 (705)
Q Consensus        99 ~g~G~aF~~~~~~~~~~~~~g~~lGl~~~~~~~~~~~~~vaVEFDt~~n~~~~d~~~~Hvgidvns~~S~~~~~~~~~~~  178 (705)
                      +||||||+|+|......  .++..|++....+.+..++.|||||||++|.+++||+++|||||+|++.|.+..       
T Consensus        81 ~gDG~AF~l~~~~~~~~--~~~~~g~~~~~~~~~~~~~~~aVEfDT~~n~~~~d~~~~Higid~n~~~s~~~~-------  151 (232)
T d1v6ia_          81 PADGIIFFIAPEDTQIP--AGSIGGGTLGVSDTKGAGHFVGVEFDTYSNSEYNDPPTDHVGIDVNSVDSVKTV-------  151 (232)
T ss_dssp             CCCEEEEEEEETTCCCC--TTCCCGGGTTTSCTTSEEEEEEEEEECSCCGGGTCCSSCEEEEEEEESSCSEEE-------
T ss_pred             CCCeEEEEEECCCCCCC--CCccCCcccccccCCCCCceEEEEEEeEecCCCCCCCCccEeEeeCCccccccc-------
Confidence            99999999999864332  222233333233345678999999999999999999999999999999887652       


Q ss_pred             CCCCCCCCCCCCCCCCCccccceeecCCCcceEEEEEe--cCceEEEEEEEccCCCCCCCceeeeecCccccccceeccc
Q 005257          179 NQTDSSGSNSNSGTGDDEKSFKELKLNNGKNYQVWIDY--ADSFINITMVEAGMKRPKRPLLSVPLNLSGVLEDEMYVGF  256 (705)
Q Consensus       179 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~I~Y--~~~~~~v~~~~~~~~~~~~~~ls~~vdl~~~l~~~~~vGf  256 (705)
                                            ..++.+|+.++|||+|  ..++|.|++...   ++..|.++..|||+.+||++|||||
T Consensus       152 ----------------------~~~~~~g~~~~v~I~Yd~~~~~L~V~~~~~---~~~~~~l~~~vdL~~~l~~~vyvGF  206 (232)
T d1v6ia_         152 ----------------------PWNSVSGAVVKVTVIYDSSTKTLSVAVTND---NGDITTIAQVVDLKAKLPERVKFGF  206 (232)
T ss_dssp             ----------------------ECCCCTTCEEEEEEEEETTTTEEEEEEECT---TSCEEEEEEECCHHHHSCSEEEEEE
T ss_pred             ----------------------ccccCCCCEEEEEEEEeCCceEEEEEEecC---CCCcceEEEEEchhhccCCcEEEEE
Confidence                                  3357799999999999  666788777643   4667789999999999999999999


Q ss_pred             ccccccc-cccceeeeeeecccc
Q 005257          257 TAATGQL-VESHKILAWSFSNTK  278 (705)
Q Consensus       257 sastg~~-~~~h~i~~wsf~~~~  278 (705)
                      |||||.. .+.|+|++|+|+++.
T Consensus       207 SAsTG~~~~~~H~I~sWsFss~l  229 (232)
T d1v6ia_         207 SASGSLGGRQIHLIRSWSFTSTL  229 (232)
T ss_dssp             EEECCSSBCCEEEEEEEEEEEEE
T ss_pred             EEECCCCCCcccEEEEeEeEEee
Confidence            9999964 599999999999875

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.9e-49  Score=411.39  Aligned_cols=256  Identities=25%  Similarity=0.387  Sum_probs=209.9

Q ss_pred             CCCCcce-EEeecCceEEEEEEEcC--CCeEEEEEEeccCC-chhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEE
Q 005257          364 KGFSEEN-VIGVGGNGKVYKGVLEG--GGAEIAVKRISHEN-DGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLML  439 (705)
Q Consensus       364 ~~f~~~~-~LG~G~fg~Vy~~~~~~--~~~~vavK~i~~~~-~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~l  439 (705)
                      ++|...+ +||+|+||+||+|.++.  ++..||||+++... ....++|.+|+++|++++|||||+++|+|..  +.++|
T Consensus         8 ~~~~~~~~~iG~G~fg~Vy~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~--~~~~l   85 (285)
T d1u59a_           8 DNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA--EALML   85 (285)
T ss_dssp             GGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEES--SSEEE
T ss_pred             cCeEECCcEEecccCeEEEEEEEecCCCcEEEEEEEEChhcCHHHHHHHHHHHHHHHhCCCCCEeeEeeeecc--CeEEE
Confidence            3455566 49999999999998753  45689999997654 3456789999999999999999999998864  46899


Q ss_pred             EEeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecC
Q 005257          440 VYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHG  519 (705)
Q Consensus       440 V~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~  519 (705)
                      ||||+++|+|.+++...+.  .+++.++.+++.|||.||.|||+   ++|+||||||+|||++.++.+||+|||+++...
T Consensus        86 vmE~~~~g~L~~~l~~~~~--~l~~~~~~~i~~qi~~gL~ylH~---~~iiHrDlKp~Nill~~~~~~Kl~DFGla~~~~  160 (285)
T d1u59a_          86 VMEMAGGGPLHKFLVGKRE--EIPVSNVAELLHQVSMGMKYLEE---KNFVHRDLAARNVLLVNRHYAKISDFGLSKALG  160 (285)
T ss_dssp             EEECCTTEEHHHHHTTCTT--TSCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEEEETTEEEECCCTTCEECT
T ss_pred             EEEeCCCCcHHHHhhcccc--CCCHHHHHHHHHHHHHHHHHHHh---CCeecCcCchhheeeccCCceeeccchhhhccc
Confidence            9999999999999865432  69999999999999999999999   999999999999999999999999999999876


Q ss_pred             CCCcce--eeeeeccccCCCccccccCCCCccccEEEEehhHHHHhh-CCCCCCCCCccHHHHHHHHHHhCchhHHHHHh
Q 005257          520 HGQVAS--TTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLS-GRRPIEEGKPNLVEMVWELMVQGKLLDALDAR  596 (705)
Q Consensus       520 ~~~~~~--~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~Ellt-G~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~  596 (705)
                      ......  .....||+.|||||++.++.++.++|||||||++|||+| |+.||......   .+...+..+..       
T Consensus       161 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDVwS~Gv~l~E~lt~G~~Pf~~~~~~---~~~~~i~~~~~-------  230 (285)
T d1u59a_         161 ADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGP---EVMAFIEQGKR-------  230 (285)
T ss_dssp             TCSCEECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTH---HHHHHHHTTCC-------
T ss_pred             ccccccccccccccCccccChHHHhCCCCCccchhhcchHHHHHHHhCCCCCCCCCCHH---HHHHHHHcCCC-------
Confidence            543322  223468999999999999999999999999999999998 99999865432   22233333322       


Q ss_pred             hhcCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHhcc
Q 005257          597 LRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLEGKI  640 (705)
Q Consensus       597 l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~  640 (705)
                          ...+...+..+.+++..||+.||++||||.+|++.|+...
T Consensus       231 ----~~~p~~~~~~l~~li~~cl~~~p~~RPs~~~i~~~L~~~~  270 (285)
T d1u59a_         231 ----MECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACY  270 (285)
T ss_dssp             ----CCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             ----CCCCCcCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHH
Confidence                2233445567889999999999999999999999987543

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.2e-49  Score=403.72  Aligned_cols=253  Identities=26%  Similarity=0.408  Sum_probs=214.5

Q ss_pred             CCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCCchhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEEEEee
Q 005257          364 KGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDY  443 (705)
Q Consensus       364 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~lV~E~  443 (705)
                      ++|+..++||+|+||+||+|+++ ++..||||+++.... ..++|.+|++++++++||||++++|+|.+ ++.+++||||
T Consensus         4 ~~~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~~-~~~~~~~Ev~~~~~l~HpnIv~~~g~~~~-~~~~~iv~Ey   80 (258)
T d1k2pa_           4 KDLTFLKELGTGQFGVVKYGKWR-GQYDVAIKMIKEGSM-SEDEFIEEAKVMMNLSHEKLVQLYGVCTK-QRPIFIITEY   80 (258)
T ss_dssp             CCCCCCCCCCEETTEEEEEEEET-TTEEEEEEEEESSSS-CHHHHHHHHHHHHTCCCTTBCCEEEEECC-SSSEEEEEEC
T ss_pred             HHCEEeEEEecCCCeEEEEEEEC-CCCEEEEEEECcCcC-CHHHHHHHHHHHHhcCCCceeeEEEEEee-CCceEEEEEc
Confidence            57888999999999999999986 578899999976533 45789999999999999999999999976 6789999999


Q ss_pred             CCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecCCCCc
Q 005257          444 MENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQV  523 (705)
Q Consensus       444 ~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~~~~~  523 (705)
                      +++|+|..++.....  .+++..+.+++.|+++||.|||+   .+|+||||||+|||+++++.+||+|||+++.......
T Consensus        81 ~~~g~l~~~~~~~~~--~~~~~~~~~i~~qi~~gl~~LH~---~~iiH~dlk~~Nill~~~~~~kl~DfG~a~~~~~~~~  155 (258)
T d1k2pa_          81 MANGCLLNYLREMRH--RFQTQQLLEMCKDVCEAMEYLES---KQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEY  155 (258)
T ss_dssp             CTTEEHHHHHHSGGG--CCCHHHHHHHHHHHHHHHHHHHH---TTBCCSCCSGGGEEECTTCCEEECCCSSCCBCSSSSC
T ss_pred             cCCCcHHHhhhcccc--CCcHHHHHHHHHHHHHHHHHHhh---cCcccccccceeEEEcCCCcEEECcchhheeccCCCc
Confidence            999999999865443  58999999999999999999998   9999999999999999999999999999987665544


Q ss_pred             ceeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhh-CCCCCCCCCccHHHHHHHHHHhCchhHHHHHhhhcCCC
Q 005257          524 ASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLS-GRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRAKGG  602 (705)
Q Consensus       524 ~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~Ellt-G~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~l~~~~~  602 (705)
                      .......||+.|+|||.+.+..++.++|||||||++|||+| |+.||......   .+...+..+..           ..
T Consensus       156 ~~~~~~~~t~~y~aPE~~~~~~~~~ksDiwS~G~~l~el~t~g~~Pf~~~~~~---~~~~~i~~~~~-----------~~  221 (258)
T d1k2pa_         156 TSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNS---ETAEHIAQGLR-----------LY  221 (258)
T ss_dssp             CCCCCSCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCHH---HHHHHHHTTCC-----------CC
T ss_pred             eeecccCCCCCcCCcHHhcCCCCCcceeecccchhhHhHHhcCCCCCCCCCHH---HHHHHHHhCCC-----------CC
Confidence            44445678999999999999999999999999999999998 89999765432   22223333211           12


Q ss_pred             CCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHh
Q 005257          603 FDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLEG  638 (705)
Q Consensus       603 ~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  638 (705)
                      .+....+.+.+++..||+.||++|||++++++.|.+
T Consensus       222 ~p~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~d  257 (258)
T d1k2pa_         222 RPHLASEKVYTIMYSCWHEKADERPTFKILLSNILD  257 (258)
T ss_dssp             CCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHC
T ss_pred             CcccccHHHHHHHHHHccCCHhHCcCHHHHHHHhhC
Confidence            233445678999999999999999999999999864

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1e-49  Score=422.61  Aligned_cols=265  Identities=24%  Similarity=0.380  Sum_probs=209.0

Q ss_pred             HhCCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCC-chhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEEE
Q 005257          362 ATKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHEN-DGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLV  440 (705)
Q Consensus       362 at~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~-~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~lV  440 (705)
                      ..++|+..+.||+|+||+||+|++..+|+.||+|+++... ....+.+.+|+++|++++|||||+++++|.. ++.+++|
T Consensus         4 ~~d~y~~~~~iG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~-~~~~~iV   82 (322)
T d1s9ja_           4 KDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYS-DGEISIC   82 (322)
T ss_dssp             CGGGEEEEEEEECCSSCCEEEEEETTTTEEEEEEEEECCCCTTHHHHHHHHGGGGGGCCCTTBCCEEEEEEC-SSEEEEE
T ss_pred             CccCCEEEEEEecCCCeEEEEEEECCCCcEEEEEEEChhhCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEE-CCEEEEE
Confidence            3567899999999999999999999999999999997653 3445678999999999999999999999986 6789999


Q ss_pred             EeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecCC
Q 005257          441 YDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGH  520 (705)
Q Consensus       441 ~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~~  520 (705)
                      |||+++|+|.+++.+..   .+++..+..++.|++.||.|||+  .++|+||||||+|||+++++++||+|||+|+....
T Consensus        83 mEy~~gg~L~~~l~~~~---~l~~~~~~~~~~qil~aL~yLH~--~~~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~  157 (322)
T d1s9ja_          83 MEHMDGGSLDQVLKKAG---RIPEQILGKVSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID  157 (322)
T ss_dssp             EECCTTEEHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHH--HHCCCCSCCSGGGEEECTTCCEEECCCCCCHHHHH
T ss_pred             EEcCCCCcHHHHHhhcC---CCCHHHHHHHHHHHHHHHHHHHH--hCCEEccccCHHHeeECCCCCEEEeeCCCccccCC
Confidence            99999999999997654   69999999999999999999997  24899999999999999999999999999986543


Q ss_pred             CCcceeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCch-----------
Q 005257          521 GQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKL-----------  589 (705)
Q Consensus       521 ~~~~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~-----------  589 (705)
                      .   .....+||+.|||||++.+..++.++||||+||++|||++|+.||.................+..           
T Consensus       158 ~---~~~~~~GT~~Y~APEvl~~~~y~~~~DiWSlGvil~ell~G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (322)
T d1s9ja_         158 S---MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPG  234 (322)
T ss_dssp             H---TC---CCSSCCCCHHHHHCSCCCTTHHHHHHHHHHHHHHHSSCCSSCCCTTHHHHHC-------------------
T ss_pred             C---ccccccCCccccCchHHcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhcCCcccCCccccccc
Confidence            2   22346899999999999999999999999999999999999999976544322221111111110           


Q ss_pred             ----------------hHHHHHhhhcC-CCC-CHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 005257          590 ----------------LDALDARLRAK-GGF-DEDEVERVLHLGLLCAYPDPRARPTMRQVVKV  635 (705)
Q Consensus       590 ----------------~~~id~~l~~~-~~~-~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  635 (705)
                                      .+..+...... ... .......+.+++..||+.||++|||++|++++
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~ta~e~L~H  298 (322)
T d1s9ja_         235 RPLSSYGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVH  298 (322)
T ss_dssp             -----------CCCCHHHHHHHHHTSCCCCCCBTTBCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred             ccccccccccccchhHHHHHhhhhccCCccCccccCCHHHHHHHHHHcCCChhHCcCHHHHhhC
Confidence                            01111100000 000 01123467889999999999999999999883

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.3e-48  Score=403.31  Aligned_cols=246  Identities=22%  Similarity=0.409  Sum_probs=201.2

Q ss_pred             CcceEEeecCceEEEEEEEcCCCeEEEEEEeccC--CchhHHHHHHHHHHhccCCCCCcceeeeeeeec---cCceEEEE
Q 005257          367 SEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHE--NDGGTRAFLAEISSLGRLKHKSLVGLRGWCKRE---KGSLMLVY  441 (705)
Q Consensus       367 ~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~--~~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~---~~~~~lV~  441 (705)
                      +..++||+|+||+||+|.+..+++.||+|++...  .....+.|.+|+++|++++||||+++++++...   +..+++||
T Consensus        12 ~~~~~iG~G~fg~Vy~~~~~~~~~~va~K~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~~~~~ivm   91 (270)
T d1t4ha_          12 KFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVT   91 (270)
T ss_dssp             EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEEEE
T ss_pred             EeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEeeccccCCEEEEEE
Confidence            4567899999999999999999999999998754  344567799999999999999999999988642   34689999


Q ss_pred             eeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCC--eeecCCCCCCeEEc-cCCCeeeeeeccceec
Q 005257          442 DYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKK--VLHRDIKSSNVLLD-KEMNGRLGDFGLARMH  518 (705)
Q Consensus       442 E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~--iiHrDLkp~NILld-~~~~~kL~DFGla~~~  518 (705)
                      ||+++|+|.+++.+..   .+++.++..++.||+.||+|||+   ++  |+||||||+|||++ +++.+||+|||+|+..
T Consensus        92 E~~~~g~L~~~l~~~~---~~~~~~~~~~~~qi~~gl~yLH~---~~~~IiHrDiKp~NILl~~~~~~~Kl~DFGla~~~  165 (270)
T d1t4ha_          92 ELMTSGTLKTYLKRFK---VMKIKVLRSWCRQILKGLQFLHT---RTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLK  165 (270)
T ss_dssp             ECCCSCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHT---SSSCCCCSCCCGGGEEESSTTSCEEECCTTGGGGC
T ss_pred             eCCCCCcHHHHHhccc---cccHHHHHHHHHHHHHHHHHHHH---CCCCEEeCCcChhhceeeCCCCCEEEeecCcceec
Confidence            9999999999997654   68999999999999999999998   66  99999999999997 4789999999999864


Q ss_pred             CCCCcceeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhHHHHHhhh
Q 005257          519 GHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDARLR  598 (705)
Q Consensus       519 ~~~~~~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~l~  598 (705)
                      ...   .....+||+.|||||++.+ +++.++|||||||++|||++|+.||.....  ...+...+..+.....+     
T Consensus       166 ~~~---~~~~~~GT~~Y~aPE~~~~-~~~~~~DIwSlGvilyel~~g~~Pf~~~~~--~~~~~~~i~~~~~~~~~-----  234 (270)
T d1t4ha_         166 RAS---FAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQN--AAQIYRRVTSGVKPASF-----  234 (270)
T ss_dssp             CTT---SBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSS--HHHHHHHHTTTCCCGGG-----
T ss_pred             cCC---ccCCcccCccccCHHHhCC-CCCCcCchhhHHHHHHHHHHCCCCCCCccc--HHHHHHHHHcCCCCccc-----
Confidence            432   2334689999999999865 699999999999999999999999975432  12233333333221111     


Q ss_pred             cCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHH
Q 005257          599 AKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVK  634 (705)
Q Consensus       599 ~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~  634 (705)
                           +....+.+.+++.+||++||++|||+.|+++
T Consensus       235 -----~~~~~~~~~~li~~~l~~dp~~R~s~~ell~  265 (270)
T d1t4ha_         235 -----DKVAIPEVKEIIEGCIRQNKDERYSIKDLLN  265 (270)
T ss_dssp             -----GGCCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             -----CccCCHHHHHHHHHHccCCHhHCcCHHHHhC
Confidence                 1112345788999999999999999999986

>d1fnya_ b.29.1.1 (A:) Legume lectin {Black locust (Robinia pseudoacacia) [TaxId: 35938]}

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Legume lectin
species: Black locust (Robinia pseudoacacia) [TaxId: 35938]

Probab=100.00  E-value=3.4e-48  Score=392.14  Aligned_cols=221  Identities=29%  Similarity=0.486  Sum_probs=191.2

Q ss_pred             ceeeEEeCCCCC--CCeEEEcceEee-cCcEEecCCC-----CCeEEEEEcCCCccccCCCCCcccceEEEEEEEEecCC
Q 005257           24 SAVDFVFNGFNS--SNLSLYGTATVE-SRILTLTNST-----TFTIGRALYPSKIPTKRPNSSYVYPFSTSFIFAMAPYK   95 (705)
Q Consensus        24 ~~~~f~f~~f~~--~~~~~~g~a~~~-~~~l~lt~~~-----~~~~Gr~~y~~pv~l~~~~~~~~~sF~t~F~f~i~~~~   95 (705)
                      .+++|+|++|.+  +||+|+|||.+. ++.||||++.     .+++|||+|++||+||++.+++++||+|+|+|.|.+.+
T Consensus         2 ~~~sF~f~~F~~~~~~l~l~G~A~v~~~g~i~LT~~~~~~~~~~~~G~~~y~~Pi~l~~~~~~~~~sF~t~F~F~i~~~~   81 (237)
T d1fnya_           2 GSLSFSFPKFAPNQPYLINQGDALVTSTGVLQLTNVVNGVPSSKSLGRALYAAPFQIWDSTTGNVASFVTSFTFIIQAPN   81 (237)
T ss_dssp             EEEEEEESSCCTTCTTEEEEETCEECTTSCEECSCEETTEECSSCEEEEEESSCEECBCTTTCCBCEEEEEEEEECCCSS
T ss_pred             ceEEEEeCCCCCCCCCeEEcccEEEcCCCEEECCCCCCCCcccccEEEEEeCCCeEcccCCCCcceeeEEEEEEEEecCC
Confidence            368999999964  799999999987 6799999863     46899999999999999999999999999999998887


Q ss_pred             CCCCCCceEEEEeeCCCCCCCCCCCcccccccCCCCCCCCcEEEEEeecccCCCCCCCCCCeeEEecCCCcccccccccc
Q 005257           96 GVLAGHGLVFLFVPFHGIKGATEAQHLGLFNRTNDGNSSNHVFGVEFDVFKNQEFNDIDENHVGIDVNSLTSVSAHAAGY  175 (705)
Q Consensus        96 ~~~~g~G~aF~~~~~~~~~~~~~g~~lGl~~~~~~~~~~~~~vaVEFDt~~n~~~~d~~~~Hvgidvns~~S~~~~~~~~  175 (705)
                      ...+||||||+|+|....+ +..||+||+++... .+..++.+||||||++|.++ ||+++|||||+|++.|..+.    
T Consensus        82 ~~~~gDG~AF~l~~~~~~~-~~~gg~lg~~~~~~-~~~~~~~~aVefDT~~n~~~-d~~~~Higi~~n~~~s~~~~----  154 (237)
T d1fnya_          82 PATTADGLAFFLAPVDTQP-LDLGGMLGIFKDGY-FNKSNQIVAVEFDTFSNGDW-DPKGRHLGINVNSIESIKTV----  154 (237)
T ss_dssp             TTSCCEEEEEEEEETTCCC-CCCGGGTTTCC----CCTTSCCEEEEEECSCCTTT-CCSSSEEEEEESSSSCSEEE----
T ss_pred             CCCCCCeeEEEEcCCCCCc-ccccCcccccCCCC-ccCccceEEEEeccccccCC-CCCCceEEEecCCCcccccc----
Confidence            7889999999999986544 56788999998543 35678999999999999875 99999999999999887663    


Q ss_pred             cCCCCCCCCCCCCCCCCCCCccccceeecCCCcceEEEEEe--cCceEEEEEEEccCCCCCCCceeeeecCcccccccee
Q 005257          176 WPDNQTDSSGSNSNSGTGDDEKSFKELKLNNGKNYQVWIDY--ADSFINITMVEAGMKRPKRPLLSVPLNLSGVLEDEMY  253 (705)
Q Consensus       176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~I~Y--~~~~~~v~~~~~~~~~~~~~~ls~~vdl~~~l~~~~~  253 (705)
                                               ...+.+|+.++|||+|  ..+++.|++...+  ++..|+++..|||+.+||++||
T Consensus       155 -------------------------~~~~~~g~~~~v~I~Y~~~~~~l~v~l~~~~--~~~~~~l~~~vdL~~~l~~~~y  207 (237)
T d1fnya_         155 -------------------------PWNWTNGEVANVFISYEASTKSLTASLVYPS--LETSFIIDAIVDVKIVLPEWVR  207 (237)
T ss_dssp             -------------------------ECCCCTTCCEEEEEEEEGGGTEEEEEEEETT--TTEEEEEEEECCHHHHSCSEEE
T ss_pred             -------------------------cccccCCcEEEEEEEEeCCccEEEEEEEeCC--CCcceeEEEEechhhcCCCcEE
Confidence                                     3356789999999999  5667888776543  6778899999999999999999


Q ss_pred             cccccccc---cccccceeeeeeecccc
Q 005257          254 VGFTAATG---QLVESHKILAWSFSNTK  278 (705)
Q Consensus       254 vGfsastg---~~~~~h~i~~wsf~~~~  278 (705)
                      ||||||||   ...|.|+|++|+|+++.
T Consensus       208 vGFSAsTG~~s~~~e~H~I~sWsF~s~l  235 (237)
T d1fnya_         208 FGFSATTGIDKGYVQTNDVLSWSFESNL  235 (237)
T ss_dssp             EEEEEEECSSTTCCCCCEEEEEEEEEEE
T ss_pred             EEEEEECCCCCCcccccEEEEeEeEEeC
Confidence            99999999   56689999999999864

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.5e-48  Score=414.24  Aligned_cols=258  Identities=25%  Similarity=0.395  Sum_probs=209.5

Q ss_pred             hCCCCcceEEeecCceEEEEEEEcCCC-----eEEEEEEeccC-CchhHHHHHHHHHHhccC-CCCCcceeeeeeeeccC
Q 005257          363 TKGFSEENVIGVGGNGKVYKGVLEGGG-----AEIAVKRISHE-NDGGTRAFLAEISSLGRL-KHKSLVGLRGWCKREKG  435 (705)
Q Consensus       363 t~~f~~~~~LG~G~fg~Vy~~~~~~~~-----~~vavK~i~~~-~~~~~~~~~~Ei~~l~~l-~Hpniv~l~g~~~~~~~  435 (705)
                      .++|+..++||+|+||+||+|++...+     ..||+|++... .....+.+.+|+.+|.++ +|||||+++++|.. .+
T Consensus        36 ~~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~HpnIv~l~~~~~~-~~  114 (325)
T d1rjba_          36 RENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTL-SG  114 (325)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECS-SS
T ss_pred             HHHeEEeeEEeeCCCeEEEEEEEcCCCcccceeEEEEEEeccccCHHHHHHHHHHHHHHHHhcCCCcEeEEEEEEee-CC
Confidence            356888999999999999999987544     37999998654 334567899999999998 89999999999876 67


Q ss_pred             ceEEEEeeCCCCChhHHHHhcCC--------------------CCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCC
Q 005257          436 SLMLVYDYMENGSLDKWIFQCDG--------------------SMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIK  495 (705)
Q Consensus       436 ~~~lV~E~~~~gsL~~~L~~~~~--------------------~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLk  495 (705)
                      .+++||||+++|+|.++|+....                    ...+++.+++.++.||+.||+|||+   ++|||||||
T Consensus       115 ~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~---~~IiHRDlK  191 (325)
T d1rjba_         115 PIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEF---KSCVHRDLA  191 (325)
T ss_dssp             SCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHH---TTEEETTCS
T ss_pred             eEEEEEEcCCCCcHHHHHHhccCCCcchhhhhccccccccccccCCCCHHHHHHHHHHHHHHHHHHHh---CCeeeccCc
Confidence            89999999999999999976432                    1358999999999999999999999   999999999


Q ss_pred             CCCeEEccCCCeeeeeeccceecCCCCcc-eeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhh-CCCCCCCCC
Q 005257          496 SSNVLLDKEMNGRLGDFGLARMHGHGQVA-STTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLS-GRRPIEEGK  573 (705)
Q Consensus       496 p~NILld~~~~~kL~DFGla~~~~~~~~~-~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~Ellt-G~~Pf~~~~  573 (705)
                      |+|||++.++.+||+|||+|+........ ......||+.|||||++.++.++.++|||||||++|||+| |+.||.+..
T Consensus       192 p~Nill~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DiwS~Gvil~emlt~g~~Pf~~~~  271 (325)
T d1rjba_         192 ARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIP  271 (325)
T ss_dssp             GGGEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCC
T ss_pred             hhccccccCCeEEEeeccccccccCCCceeeeccccCCCccCChHHHcCCCCCcceeccchhHHHHHHHhCCCCCCCCCC
Confidence            99999999999999999999876544332 2334678999999999999999999999999999999997 899997654


Q ss_pred             ccHHHHHHHHHHhCchhHHHHHhhhcCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHH
Q 005257          574 PNLVEMVWELMVQGKLLDALDARLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLE  637 (705)
Q Consensus       574 ~~~~~~v~~~~~~~~~~~~id~~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~  637 (705)
                      ..  +.+...+..+.         +  ...+....+.+.+|+..||+.||++|||++||+++|.
T Consensus       272 ~~--~~~~~~~~~~~---------~--~~~p~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~  322 (325)
T d1rjba_         272 VD--ANFYKLIQNGF---------K--MDQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLG  322 (325)
T ss_dssp             CS--HHHHHHHHTTC---------C--CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred             HH--HHHHHHHhcCC---------C--CCCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHh
Confidence            32  11222222221         1  2233344567899999999999999999999999986

>d1n47a_ b.29.1.1 (A:) Legume lectin {Hairy vetch (Vicia villosa), isolectin b4 [TaxId: 3911]}

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Legume lectin
species: Hairy vetch (Vicia villosa), isolectin b4 [TaxId: 3911]

Probab=100.00  E-value=5.9e-48  Score=388.58  Aligned_cols=218  Identities=30%  Similarity=0.494  Sum_probs=188.4

Q ss_pred             ceeeEEeCCCCC--CCeEEEcceEee-cCcEEecCCCC-----CeEEEEEcCCCccccCCCCCcccceEEEEEEEEecCC
Q 005257           24 SAVDFVFNGFNS--SNLSLYGTATVE-SRILTLTNSTT-----FTIGRALYPSKIPTKRPNSSYVYPFSTSFIFAMAPYK   95 (705)
Q Consensus        24 ~~~~f~f~~f~~--~~~~~~g~a~~~-~~~l~lt~~~~-----~~~Gr~~y~~pv~l~~~~~~~~~sF~t~F~f~i~~~~   95 (705)
                      ++++|+|++|++  .||+|+|||.+. +|.||||++..     +++|||||++||+||++.  .++||+|+|+|.|.+.+
T Consensus         2 ~~~sF~f~~F~~~~~~l~l~G~A~i~~~g~i~LT~~~~~~~~~~~~G~~~y~~Pv~l~~~~--~~~sF~t~f~f~i~~~~   79 (233)
T d1n47a_           2 ESTSFSFTNFNPNQNNLILQEDALVNSAGTLELTAVAAGAPVPDSLGRALYAAPIHIHDNT--TLASFTTSFSFVMAAPA   79 (233)
T ss_dssp             EEEEEEESSCCTTCTTEEEEETCEECTTSCEESSCBSSSSBCTTCEEEEEESSCEECBCSS--CBCEEEEEEEEECCCSS
T ss_pred             CceEEEeCCCCCCCCCeEEecceEECCCCEEEecCCCCCCcCCCceEEEEeCCCEEccCCC--eeeeEEEEEEEEEeCCC
Confidence            478999999964  799999999987 67999998653     589999999999999864  58999999999998887


Q ss_pred             CCCCCCceEEEEeeCCCCCCCCCCCcccccccCCCCCCCCcEEEEEeecccCCCCCCCCCCeeEEecCCCcccccccccc
Q 005257           96 GVLAGHGLVFLFVPFHGIKGATEAQHLGLFNRTNDGNSSNHVFGVEFDVFKNQEFNDIDENHVGIDVNSLTSVSAHAAGY  175 (705)
Q Consensus        96 ~~~~g~G~aF~~~~~~~~~~~~~g~~lGl~~~~~~~~~~~~~vaVEFDt~~n~~~~d~~~~Hvgidvns~~S~~~~~~~~  175 (705)
                      ...+||||||+|+|.+..+ +..|++|||++.+.. +..++.|||||||++|.  +||++||||||+|++.|.++.    
T Consensus        80 ~~~~gDGlAF~l~~~~~~~-~~~gg~lGl~~~~~~-~~~~~~~aVefDT~~n~--~d~~~~higi~~n~~~s~~~~----  151 (233)
T d1n47a_          80 AAAVADGLAFFLAPPDTQP-QARGGFLGLFADRAH-DASYQTVAVEFDTYSNA--WDPNYTHIGIDTNGIESKKTT----  151 (233)
T ss_dssp             TTSCCEEEEEEEECTTCCC-CCCGGGTTTCSSSSC-CGGGCCEEEEEECSCCT--TSCSSCEEEEEESSSSCSEEE----
T ss_pred             CCCCCCceEEEECCCCCCC-CCCCCccccccccCC-CCcCceEEEEEEeeecC--CCCCCCceeEccCCccccccc----
Confidence            7889999999999976544 567899999986543 46788999999999998  699999999999999887663    


Q ss_pred             cCCCCCCCCCCCCCCCCCCCccccceeecCCCcceEEEEEe--cCceEEEEEEEccCCCCCCCceeeeecCcccccccee
Q 005257          176 WPDNQTDSSGSNSNSGTGDDEKSFKELKLNNGKNYQVWIDY--ADSFINITMVEAGMKRPKRPLLSVPLNLSGVLEDEMY  253 (705)
Q Consensus       176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~I~Y--~~~~~~v~~~~~~~~~~~~~~ls~~vdl~~~l~~~~~  253 (705)
                                               .+.+.+|+.++|||+|  ..+.+.|++..  ..+|..|.++..|||+.+||++||
T Consensus       152 -------------------------~~~l~~g~~~~v~I~Y~~~~~~l~v~l~~--~~~~~~~~ls~~vdL~~~l~~~vy  204 (233)
T d1n47a_         152 -------------------------PFDMVYGEKANIVITYQASTKALAASLVF--PVSQTSYAVSARVDLRDILPEYVR  204 (233)
T ss_dssp             -------------------------ECCCCTTSCEEEEEEEETTTTEEEEEEEE--TTTTEEEEEEEECCGGGTSCSEEE
T ss_pred             -------------------------cceecCCCEEEEEEEEcCCCeEEEEEEEe--CCCCccEEEEEEechHHhcCCcEE
Confidence                                     3467899999999999  55677887764  346888899999999999999999


Q ss_pred             cccccccc---cccccceeeeeeecccc
Q 005257          254 VGFTAATG---QLVESHKILAWSFSNTK  278 (705)
Q Consensus       254 vGfsastg---~~~~~h~i~~wsf~~~~  278 (705)
                      ||||||||   ...|.|+|++|+|+++.
T Consensus       205 vGFSAsTG~~~~~~~~H~I~sWsFss~l  232 (233)
T d1n47a_         205 VGFSATTGLNAGVVETHDIVSWSFAVSL  232 (233)
T ss_dssp             EEEEEEECSSTTCCCCCEEEEEEEEEEE
T ss_pred             EEEEEecCCCCCcccccEEEEEEeEEEc
Confidence            99999999   45789999999999863

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=4.3e-48  Score=408.48  Aligned_cols=246  Identities=25%  Similarity=0.320  Sum_probs=207.8

Q ss_pred             CCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccC---CchhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEEE
Q 005257          364 KGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHE---NDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLV  440 (705)
Q Consensus       364 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~---~~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~lV  440 (705)
                      ++|+..+.||+|+||+||+|+++.+|+.||||+++..   .....+.+.+|+.++++++||||+++++++.. ++.+++|
T Consensus         4 ~dy~i~~~lG~G~fg~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~-~~~~~iv   82 (316)
T d1fota_           4 QDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQD-AQQIFMI   82 (316)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEEC-SSEEEEE
T ss_pred             hHeEEEEEEecCcCcEEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHhccCcChhheeeeEee-CCeeeeE
Confidence            4688899999999999999999999999999999653   23446789999999999999999999998876 7789999


Q ss_pred             EeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecCC
Q 005257          441 YDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGH  520 (705)
Q Consensus       441 ~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~~  520 (705)
                      |||+++|+|..++....   .+++..+..++.||+.||+|||+   ++|+||||||+|||++.++.+||+|||+|+....
T Consensus        83 mE~~~gg~l~~~~~~~~---~~~~~~~~~~~~qi~~al~~lH~---~~iiHrDiKp~NILl~~~g~vkL~DFG~a~~~~~  156 (316)
T d1fota_          83 MDYIEGGELFSLLRKSQ---RFPNPVAKFYAAEVCLALEYLHS---KDIIYRDLKPENILLDKNGHIKITDFGFAKYVPD  156 (316)
T ss_dssp             ECCCCSCBHHHHHHHTS---SCCHHHHHHHHHHHHHHHHHHHT---TTEECCCCCGGGEEECTTSCEEECCCSSCEECSS
T ss_pred             eeecCCccccccccccc---cccccHHHHHHHHHHHhhhhhcc---CcEEccccCchheeEcCCCCEEEecCccceEecc
Confidence            99999999999887644   57889999999999999999998   9999999999999999999999999999987654


Q ss_pred             CCcceeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhHHHHHhhhcC
Q 005257          521 GQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRAK  600 (705)
Q Consensus       521 ~~~~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~l~~~  600 (705)
                      .    ....+||+.|||||++.+..++.++|||||||++|||++|+.||......   .....+..+.            
T Consensus       157 ~----~~~~~Gt~~Y~APE~l~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~---~~~~~i~~~~------------  217 (316)
T d1fota_         157 V----TYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTM---KTYEKILNAE------------  217 (316)
T ss_dssp             C----BCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHH---HHHHHHHHCC------------
T ss_pred             c----cccccCcccccCHHHHcCCCCCchhhccccchhHHHHHhCCCCCCCcCHH---HHHHHHHcCC------------
Confidence            3    23468999999999999999999999999999999999999999875431   1122222221            


Q ss_pred             CCCCHHHHHHHHHHHHHcCCCCCCCCC-----CHHHHHHH
Q 005257          601 GGFDEDEVERVLHLGLLCAYPDPRARP-----TMRQVVKV  635 (705)
Q Consensus       601 ~~~~~~~~~~l~~l~~~Cl~~dP~~RP-----s~~evl~~  635 (705)
                      ..++....+.+.+++.+||+.||.+||     |+++++++
T Consensus       218 ~~~p~~~s~~~~~li~~~L~~dp~~R~~~~r~t~~~il~H  257 (316)
T d1fota_         218 LRFPPFFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKNH  257 (316)
T ss_dssp             CCCCTTSCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHTS
T ss_pred             CCCCCCCCHHHHHHHHHHhhhCHHhccccchhhHHHHHcC
Confidence            223333445688999999999999996     78887763

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=2.1e-48  Score=408.63  Aligned_cols=265  Identities=25%  Similarity=0.415  Sum_probs=214.9

Q ss_pred             HHHHHhCCCCcceEEeecCceEEEEEEEcC-----CCeEEEEEEeccCCch-hHHHHHHHHHHhccCCCCCcceeeeeee
Q 005257          358 EIEAATKGFSEENVIGVGGNGKVYKGVLEG-----GGAEIAVKRISHENDG-GTRAFLAEISSLGRLKHKSLVGLRGWCK  431 (705)
Q Consensus       358 el~~at~~f~~~~~LG~G~fg~Vy~~~~~~-----~~~~vavK~i~~~~~~-~~~~~~~Ei~~l~~l~Hpniv~l~g~~~  431 (705)
                      +++...++|+..+.||+|+||+||+|++++     +++.||||+++..... ..++|.+|+++|++++||||++++++|.
T Consensus         7 ~~e~p~~~~~~~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~   86 (301)
T d1lufa_           7 SLEYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCA   86 (301)
T ss_dssp             HTBCCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC
T ss_pred             hccCCHHHcEEeEEEeeCCCeEEEEEEECCCccCCCCeEEEEEEEChhcChHHHHHHHHHHHHHHhcCCCCcccceeeec
Confidence            344456789999999999999999999863     4578999999765433 4567999999999999999999999998


Q ss_pred             eccCceEEEEeeCCCCChhHHHHhcCC---------------------CCcccHHHHHHHHHHHHHHHHHHhcCCCCCee
Q 005257          432 REKGSLMLVYDYMENGSLDKWIFQCDG---------------------SMMLSCEERIRVLKDVAAGVLYLHEGWEKKVL  490 (705)
Q Consensus       432 ~~~~~~~lV~E~~~~gsL~~~L~~~~~---------------------~~~l~~~~~~~i~~qia~gL~yLH~~~~~~ii  490 (705)
                      . .+..++||||+++|+|.++++....                     ...+++.+++.++.|++.||+|||+   ++||
T Consensus        87 ~-~~~~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~ylH~---~~iv  162 (301)
T d1lufa_          87 V-GKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSE---RKFV  162 (301)
T ss_dssp             S-SSSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHH---TTCC
T ss_pred             c-CCceEEEEEecCCCcHHHHHHhcCccccccccccccchhhhccccCCCCCCHHHHHHHHHHHHHHhhhccc---CCeE
Confidence            6 6789999999999999999975321                     1248999999999999999999998   9999


Q ss_pred             ecCCCCCCeEEccCCCeeeeeeccceecCCCC-cceeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhhCC-CC
Q 005257          491 HRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQ-VASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGR-RP  568 (705)
Q Consensus       491 HrDLkp~NILld~~~~~kL~DFGla~~~~~~~-~~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~-~P  568 (705)
                      ||||||+|||++.++++||+|||+|+...... ........||+.|+|||.+.+..++.++|||||||++|||++|. .|
T Consensus       163 HrDlKp~NILld~~~~~Kl~DFGls~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~t~ksDVwS~Gvvl~ell~~~~~p  242 (301)
T d1lufa_         163 HRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQP  242 (301)
T ss_dssp             CSCCSGGGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCT
T ss_pred             eeEEcccceEECCCCcEEEccchhheeccCCccccccCCCCcCcCcCCHHHHccCCCChhhhhccchhhHHHHHccCCCC
Confidence            99999999999999999999999998654332 22334467899999999999999999999999999999999986 56


Q ss_pred             CCCCCccHHHHHHHHHHhCchhHHHHHhhhcCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHhcc
Q 005257          569 IEEGKPNLVEMVWELMVQGKLLDALDARLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLEGKI  640 (705)
Q Consensus       569 f~~~~~~~~~~v~~~~~~~~~~~~id~~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~  640 (705)
                      |.....   ..+...+..+..           ...+...+..+.+|+..||+.||++||||.||++.|+++.
T Consensus       243 ~~~~~~---~e~~~~v~~~~~-----------~~~p~~~~~~~~~li~~cl~~~P~~RPt~~ev~~~L~~i~  300 (301)
T d1lufa_         243 YYGMAH---EEVIYYVRDGNI-----------LACPENCPLELYNLMRLCWSKLPADRPSFCSIHRILQRMC  300 (301)
T ss_dssp             TTTSCH---HHHHHHHHTTCC-----------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTT
T ss_pred             CCCCCH---HHHHHHHHcCCC-----------CCCCccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhc
Confidence            665432   122233333322           1223344567889999999999999999999999998764

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.8e-48  Score=405.34  Aligned_cols=257  Identities=26%  Similarity=0.432  Sum_probs=204.9

Q ss_pred             CCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCCchhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEEEEee
Q 005257          364 KGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDY  443 (705)
Q Consensus       364 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~lV~E~  443 (705)
                      ++|+..+.||+|+||+||+|+++++ ..||||+++.. ....+.|.+|+.++++++|||||+++++|.+  +.+++||||
T Consensus        17 ~~~~i~~~iG~G~fg~Vy~~~~~~~-~~vAiK~l~~~-~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~--~~~~lv~Ey   92 (285)
T d1fmka3          17 ESLRLEVKLGQGCFGEVWMGTWNGT-TRVAIKTLKPG-TMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE--EPIYIVTEY   92 (285)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTT-EEEEEEECCTT-SSCHHHHHHHHHHHHHCCCTTBCCEEEEECS--SSCEEEECC
T ss_pred             HHEEEeeEEeeCCCeEEEEEEECCC-CEEEEEEECcc-cCCHHHHHHHHHHHHhcccCCEeEEEEEEec--CCeEEEEEe
Confidence            4688899999999999999999754 67999999644 3456789999999999999999999999853  467999999


Q ss_pred             CCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecCCCCc
Q 005257          444 MENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQV  523 (705)
Q Consensus       444 ~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~~~~~  523 (705)
                      +++|+|..++...... .++|.+++.++.||+.||+|||+   ++|+||||||+||||++++++||+|||+++.......
T Consensus        93 ~~~g~l~~~~~~~~~~-~l~~~~~~~i~~~i~~gl~~LH~---~~ivH~DlKp~NIll~~~~~~kl~DfGla~~~~~~~~  168 (285)
T d1fmka3          93 MSKGSLLDFLKGETGK-YLRLPQLVDMAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEY  168 (285)
T ss_dssp             CTTCBHHHHHSHHHHT-TCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECGGGCEEECCCCTTC-------
T ss_pred             cCCCchhhhhhhcccc-cchHHHHHHHHHHHHHHHHHHhh---hheecccccceEEEECCCCcEEEcccchhhhccCCCc
Confidence            9999999988654322 59999999999999999999998   9999999999999999999999999999987765554


Q ss_pred             ceeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhHHHHHhhhcCCCC
Q 005257          524 ASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRAKGGF  603 (705)
Q Consensus       524 ~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~l~~~~~~  603 (705)
                      .......||+.|+|||++..+.++.++|||||||++|||++|..|+......  ......+..+         .+  ...
T Consensus       169 ~~~~~~~gt~~y~aPE~~~~~~~~~ksDI~S~Giil~el~t~~~p~~~~~~~--~~~~~~i~~~---------~~--~~~  235 (285)
T d1fmka3         169 TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN--REVLDQVERG---------YR--MPC  235 (285)
T ss_dssp             -------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCH--HHHHHHHHTT---------CC--CCC
T ss_pred             eeeccccccccccChHHHhCCCCCcHHhhhcchHHHHHHHhCCCCCCCCCCH--HHHHHHHHhc---------CC--CCC
Confidence            4455568999999999999999999999999999999999977776554321  1112222222         11  223


Q ss_pred             CHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHhccc
Q 005257          604 DEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLEGKIE  641 (705)
Q Consensus       604 ~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~  641 (705)
                      +....+.+.+++.+||+.||++|||+.+|++.|+....
T Consensus       236 ~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~~~~  273 (285)
T d1fmka3         236 PPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFT  273 (285)
T ss_dssp             CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTTTS
T ss_pred             CcccCHHHHHHHHHHcccCHhHCcCHHHHHHHHhhhhc
Confidence            44455678999999999999999999999999987654

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=7.8e-49  Score=412.53  Aligned_cols=253  Identities=24%  Similarity=0.379  Sum_probs=194.0

Q ss_pred             hCCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCCc-hhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEEEE
Q 005257          363 TKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHEND-GGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVY  441 (705)
Q Consensus       363 t~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~-~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~lV~  441 (705)
                      .+.|+..+.||+|+||+||+|.++.+++.||||++..... ...+.+.+|+++|++++||||+++++++.+ ++.++|||
T Consensus         8 ~d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~-~~~~~lvm   86 (307)
T d1a06a_           8 RDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIVALDDIYES-GGHLYLIM   86 (307)
T ss_dssp             GGTEEEEEESBSGGGGGEEEEEETTTCCEEEEEEEEC----------CHHHHHHHTCCCTTBCCEEEEEEC-SSEEEEEE
T ss_pred             ccceEEEEEEeeccCeEEEEEEECCCCCEEEEEEEchHHhhhHHHHHHHHHHHHHhCCCCCCCcEEEEEEE-CCEEEEEE
Confidence            4568899999999999999999999999999999976532 334568899999999999999999998876 67899999


Q ss_pred             eeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEc---cCCCeeeeeeccceec
Q 005257          442 DYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLD---KEMNGRLGDFGLARMH  518 (705)
Q Consensus       442 E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld---~~~~~kL~DFGla~~~  518 (705)
                      ||+++|+|.++|...+   .+++.++..++.||+.||+|||+   ++|+||||||+|||+.   +++.+||+|||+|+..
T Consensus        87 E~~~gg~L~~~l~~~~---~l~e~~~~~~~~qi~~al~ylH~---~~iiHrDiKp~Nil~~~~~~~~~vkl~DFG~a~~~  160 (307)
T d1a06a_          87 QLVSGGELFDRIVEKG---FYTERDASRLIFQVLDAVKYLHD---LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKME  160 (307)
T ss_dssp             CCCCSCBHHHHHHTCS---CCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEESSSSTTCCEEECCC------
T ss_pred             eccCCCcHHHhhhccc---CCCHHHHHHHHHHHHHHHHhhhh---ceeeeEEecccceeecccCCCceEEEeccceeEEc
Confidence            9999999999997533   69999999999999999999998   9999999999999995   5789999999999876


Q ss_pred             CCCCcceeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhHHHHHhhh
Q 005257          519 GHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDARLR  598 (705)
Q Consensus       519 ~~~~~~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~l~  598 (705)
                      .....  ....+||+.|||||++.+..++.++|||||||++|||++|+.||.+....   .....+..+...        
T Consensus       161 ~~~~~--~~~~~GT~~y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~---~~~~~i~~~~~~--------  227 (307)
T d1a06a_         161 DPGSV--LSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDA---KLFEQILKAEYE--------  227 (307)
T ss_dssp             --------------CTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH---HHHHHHHTTCCC--------
T ss_pred             cCCCe--eeeeeeCccccCcHHHcCCCCCcHHHhhhhhHHHHHHHhCCCCCCCCCHH---HHHHHHhccCCC--------
Confidence            54332  23468999999999999999999999999999999999999999865431   222222222211        


Q ss_pred             cCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 005257          599 AKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKV  635 (705)
Q Consensus       599 ~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  635 (705)
                      ..........+.+.+++..||+.||++|||+.|++++
T Consensus       228 ~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~h  264 (307)
T d1a06a_         228 FDSPYWDDISDSAKDFIRHLMEKDPEKRFTCEQALQH  264 (307)
T ss_dssp             CCTTTTTTSCHHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred             CCCccccCCCHHHHHHHHHHccCCHhHCcCHHHHhcC
Confidence            0011122334568899999999999999999999984

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

Probab=100.00  E-value=1.1e-47  Score=410.74  Aligned_cols=254  Identities=21%  Similarity=0.313  Sum_probs=212.0

Q ss_pred             hCCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCCchhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEEEEe
Q 005257          363 TKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYD  442 (705)
Q Consensus       363 t~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~lV~E  442 (705)
                      -++|+..+.||+|+||.||+|+++.+|+.||||++........+.+.+|+++|++++||||+++++++.+ ++.+++|||
T Consensus        25 l~~Y~i~~~lG~G~fg~Vy~~~~~~~g~~vAvK~i~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~-~~~~~ivmE  103 (350)
T d1koaa2          25 LDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFED-DNEMVMIYE  103 (350)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECCCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEEE-TTEEEEEEC
T ss_pred             ccCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEcccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEE-CCEEEEEEE
Confidence            3579999999999999999999999999999999987766667889999999999999999999998886 778999999


Q ss_pred             eCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEcc--CCCeeeeeeccceecCC
Q 005257          443 YMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDK--EMNGRLGDFGLARMHGH  520 (705)
Q Consensus       443 ~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~--~~~~kL~DFGla~~~~~  520 (705)
                      ||++|+|.+++.+...  .+++.++..++.||+.||.|||+   ++||||||||+|||++.  ++.+||+|||+|+....
T Consensus       104 ~~~gg~L~~~l~~~~~--~l~e~~~~~i~~qi~~aL~ylH~---~~iiHrDiKp~NIll~~~~~~~vkL~DFG~a~~~~~  178 (350)
T d1koaa2         104 FMSGGELFEKVADEHN--KMSEDEAVEYMRQVCKGLCHMHE---NNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDP  178 (350)
T ss_dssp             CCCSCBHHHHHTCTTS--CBCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEESSTTSCCEEECCCTTCEECCT
T ss_pred             cCCCCCHHHHHHhhcC--CCCHHHHHHHHHHHHHHHHHHHh---cCCeeeeechhHeeeccCCCCeEEEeecchheeccc
Confidence            9999999999864332  69999999999999999999999   99999999999999964  67899999999998754


Q ss_pred             CCcceeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhHHHHHhhhcC
Q 005257          521 GQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRAK  600 (705)
Q Consensus       521 ~~~~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~l~~~  600 (705)
                      ...  .....||+.|||||++.+..++.++|||||||++|||++|+.||.....   ......+..+...        ..
T Consensus       179 ~~~--~~~~~gT~~Y~aPEv~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~---~~~~~~i~~~~~~--------~~  245 (350)
T d1koaa2         179 KQS--VKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGEND---DETLRNVKSCDWN--------MD  245 (350)
T ss_dssp             TSC--EEEECSCTTTCCHHHHHTCCBCHHHHHHHHHHHHHHHHHSSCSSCCSSH---HHHHHHHHHTCCC--------SC
T ss_pred             ccc--cceecCcccccCHHHHcCCCCChhHhhhhhhHHHHHHHhCCCCCCCCCH---HHHHHHHHhCCCC--------CC
Confidence            432  3446899999999999999999999999999999999999999976542   1122222222110        00


Q ss_pred             CCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 005257          601 GGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKV  635 (705)
Q Consensus       601 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  635 (705)
                      ........+.+.+++.+||+.||++|||+.|++++
T Consensus       246 ~~~~~~~s~~~~~li~~~L~~dP~~R~t~~eil~h  280 (350)
T d1koaa2         246 DSAFSGISEDGKDFIRKLLLADPNTRMTIHQALEH  280 (350)
T ss_dssp             CGGGGGCCHHHHHHHHHHCCSSGGGSCCHHHHHHS
T ss_pred             cccccCCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence            00111223567889999999999999999999985

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.3e-48  Score=402.70  Aligned_cols=258  Identities=23%  Similarity=0.347  Sum_probs=201.8

Q ss_pred             hCCCCcceEEeecCceEEEEEEEcCC---CeEEEEEEeccCCc-hhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceE
Q 005257          363 TKGFSEENVIGVGGNGKVYKGVLEGG---GAEIAVKRISHEND-GGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLM  438 (705)
Q Consensus       363 t~~f~~~~~LG~G~fg~Vy~~~~~~~---~~~vavK~i~~~~~-~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~  438 (705)
                      .++|+..+.||+|+||+||+|.+..+   +..||||.++.... ...+.|.+|++++++++||||++++++|.  ++.++
T Consensus         6 ~~~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~--~~~~~   83 (273)
T d1mp8a_           6 RERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT--ENPVW   83 (273)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC--SSSCE
T ss_pred             HHHeEEEEEEeeCCCcEEEEEEEecCCceeEEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEe--cCeEE
Confidence            35688899999999999999998643   35799999865543 34567999999999999999999999885  45789


Q ss_pred             EEEeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceec
Q 005257          439 LVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMH  518 (705)
Q Consensus       439 lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~  518 (705)
                      +||||+++|+|.+++.....  .+++.+++.++.||+.||.|||+   ++|+||||||+||++++++.+||+|||+|+..
T Consensus        84 iv~E~~~~g~l~~~~~~~~~--~l~~~~~~~~~~qi~~gl~ylH~---~~iiHrDlKp~NIll~~~~~~Kl~DfG~a~~~  158 (273)
T d1mp8a_          84 IIMELCTLGELRSFLQVRKY--SLDLASLILYAYQLSTALAYLES---KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM  158 (273)
T ss_dssp             EEEECCTTEEHHHHHHHTTT--TSCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEEEETTEEEECC-------
T ss_pred             EEEEeccCCcHHhhhhccCC--CCCHHHHHHHHHHHHHHhhhhcc---cCeeccccchhheeecCCCcEEEccchhheec
Confidence            99999999999998876443  68999999999999999999999   99999999999999999999999999999877


Q ss_pred             CCCCcceeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhh-CCCCCCCCCccHHHHHHHHHHhCchhHHHHHhh
Q 005257          519 GHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLS-GRRPIEEGKPNLVEMVWELMVQGKLLDALDARL  597 (705)
Q Consensus       519 ~~~~~~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~Ellt-G~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~l  597 (705)
                      ............||+.|+|||++.+..++.++|||||||++|||++ |+.||.......   +...+..+..        
T Consensus       159 ~~~~~~~~~~~~gt~~y~apE~l~~~~~~~~~DiwSlGvil~e~lt~g~~P~~~~~~~~---~~~~i~~~~~--------  227 (273)
T d1mp8a_         159 EDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNND---VIGRIENGER--------  227 (273)
T ss_dssp             ------------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG---HHHHHHTTCC--------
T ss_pred             cCCcceeccceecCcccchhhHhccCCCCCccccccchHHHHHHHhcCCCCCCCCCHHH---HHHHHHcCCC--------
Confidence            6555545556688999999999999999999999999999999998 899997654421   1222223221        


Q ss_pred             hcCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHhccc
Q 005257          598 RAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLEGKIE  641 (705)
Q Consensus       598 ~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~  641 (705)
                         ...+....+.+.+++..||+.||++|||+.||++.|+.+.+
T Consensus       228 ---~~~~~~~~~~~~~li~~cl~~dp~~Rps~~ei~~~L~~i~~  268 (273)
T d1mp8a_         228 ---LPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILE  268 (273)
T ss_dssp             ---CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             ---CCCCCCCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHH
Confidence               12333455678999999999999999999999999986654

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=5.4e-48  Score=406.34  Aligned_cols=246  Identities=26%  Similarity=0.375  Sum_probs=203.9

Q ss_pred             CCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCCc---hhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEEE
Q 005257          364 KGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHEND---GGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLV  440 (705)
Q Consensus       364 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~---~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~lV  440 (705)
                      +.|+..+.||+|+||+||+|++..+++.||||+++....   ...+.+.+|+++|++++|||||++++++.. ++.+++|
T Consensus        15 ~~y~~l~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~-~~~~~iv   93 (309)
T d1u5ra_          15 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLR-EHTAWLV   93 (309)
T ss_dssp             HHEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEECCSSCHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEE-TTEEEEE
T ss_pred             HhcEeeEEEecCCCeEEEEEEECCCCcEEEEEEEchhhccCHHHHHHHHHHHHHHHHCCCCCEeeEEEEEEE-CCEEEEE
Confidence            348889999999999999999999999999999976532   334678999999999999999999999876 6789999


Q ss_pred             EeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecCC
Q 005257          441 YDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGH  520 (705)
Q Consensus       441 ~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~~  520 (705)
                      ||||++|+|..++....   .+++.++..++.||+.||.|||+   ++|+||||||+|||++.++++||+|||+|+....
T Consensus        94 ~E~~~~g~l~~~~~~~~---~l~e~~~~~i~~qi~~aL~yLH~---~~iiHrDiKp~NILl~~~~~~Kl~DFG~a~~~~~  167 (309)
T d1u5ra_          94 MEYCLGSASDLLEVHKK---PLQEVEIAAVTHGALQGLAYLHS---HNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAP  167 (309)
T ss_dssp             EECCSEEHHHHHHHHTS---CCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCSGGGEEEETTTEEEECCCTTCBSSSS
T ss_pred             EEecCCCchHHHHHhCC---CCCHHHHHHHHHHHHHHHHHHHh---CCEeccCCCcceEEECCCCCEEEeecccccccCC
Confidence            99999999987765432   69999999999999999999999   9999999999999999999999999999986543


Q ss_pred             CCcceeeeeeccccCCCcccccc---CCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhHHHHHhh
Q 005257          521 GQVASTTRVVGTVGYLAPEVFSS---GRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDARL  597 (705)
Q Consensus       521 ~~~~~~~~~~gt~~y~APE~~~~---~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~l  597 (705)
                      .     ....||+.|||||++.+   +.++.++|||||||++|||++|+.||.+...  .+.... +..+...       
T Consensus       168 ~-----~~~~GT~~Y~APE~~~~~~~~~y~~~~DiwSlGvilyel~~g~~Pf~~~~~--~~~~~~-i~~~~~~-------  232 (309)
T d1u5ra_         168 A-----NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNA--MSALYH-IAQNESP-------  232 (309)
T ss_dssp             B-----CCCCSCGGGCCHHHHTTTTSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH--HHHHHH-HHHSCCC-------
T ss_pred             C-----CccccCccccCHHHHhccCCCCcCchhhhhhHHHHHHHHHHCCCCCCCCCH--HHHHHH-HHhCCCC-------
Confidence            2     23579999999999864   4689999999999999999999999976442  121111 1111110       


Q ss_pred             hcCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHH
Q 005257          598 RAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVK  634 (705)
Q Consensus       598 ~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~  634 (705)
                         ...+....+.+.+++..||+.||++|||+.|+++
T Consensus       233 ---~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~  266 (309)
T d1u5ra_         233 ---ALQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLK  266 (309)
T ss_dssp             ---CCSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred             ---CCCCCCCCHHHHHHHHHHCcCChhHCcCHHHHHh
Confidence               1112223456889999999999999999999987

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

Probab=100.00  E-value=3.3e-47  Score=407.34  Aligned_cols=258  Identities=22%  Similarity=0.285  Sum_probs=214.3

Q ss_pred             hCCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCCchhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEEEEe
Q 005257          363 TKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYD  442 (705)
Q Consensus       363 t~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~lV~E  442 (705)
                      .++|+..+.||+|+||+||+|.+..+|+.||||+++.......+.+.+|+++|++++||||+++++++.. ++.++||||
T Consensus        28 ~d~Y~i~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~-~~~~~ivmE  106 (352)
T d1koba_          28 YDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFED-KYEMVLILE  106 (352)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEEC-SSEEEEEEE
T ss_pred             ccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEECCcchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEE-CCEEEEEEE
Confidence            3579999999999999999999999999999999987666666788999999999999999999998876 778999999


Q ss_pred             eCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEc--cCCCeeeeeeccceecCC
Q 005257          443 YMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLD--KEMNGRLGDFGLARMHGH  520 (705)
Q Consensus       443 ~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld--~~~~~kL~DFGla~~~~~  520 (705)
                      ||++|+|.+++....  ..+++.+++.++.||+.||.|||+   ++|+||||||+|||++  .++.+||+|||+|+....
T Consensus       107 ~~~gg~L~~~~~~~~--~~l~e~~~~~i~~qi~~aL~ylH~---~~iiHRDiKp~NILl~~~~~~~vkL~DFGla~~~~~  181 (352)
T d1koba_         107 FLSGGELFDRIAAED--YKMSEAEVINYMRQACEGLKHMHE---HSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNP  181 (352)
T ss_dssp             CCCCCBHHHHTTCTT--CCBCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEESSTTCCCEEECCCTTCEECCT
T ss_pred             cCCCChHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHH---CCeeecccccccccccccCCCeEEEeecccceecCC
Confidence            999999998875433  269999999999999999999998   9999999999999998  578999999999998765


Q ss_pred             CCcceeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhHHHHHhhhcC
Q 005257          521 GQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRAK  600 (705)
Q Consensus       521 ~~~~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~l~~~  600 (705)
                      ...  .....||+.|||||++.+..++.++|||||||++|||+||+.||.+....   .....+..+...        ..
T Consensus       182 ~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~---~~~~~i~~~~~~--------~~  248 (352)
T d1koba_         182 DEI--VKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDL---ETLQNVKRCDWE--------FD  248 (352)
T ss_dssp             TSC--EEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHH---HHHHHHHHCCCC--------CC
T ss_pred             CCc--eeeccCcccccCHHHHcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCHH---HHHHHHHhCCCC--------CC
Confidence            433  34468999999999999999999999999999999999999999765421   112222222110        00


Q ss_pred             CCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH--HHhc
Q 005257          601 GGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKV--LEGK  639 (705)
Q Consensus       601 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~--L~~~  639 (705)
                      ..........+.+++..||+.||.+|||+.|++++  +++.
T Consensus       249 ~~~~~~~s~~~~~li~~~L~~dp~~R~s~~eil~Hp~~~~~  289 (352)
T d1koba_         249 EDAFSSVSPEAKDFIKNLLQKEPRKRLTVHDALEHPWLKGD  289 (352)
T ss_dssp             SSTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHTSTTTSSC
T ss_pred             cccccCCCHHHHHHHHHHccCChhHCcCHHHHhcCHhhCCC
Confidence            11112334567899999999999999999999884  5543

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.2e-47  Score=405.79  Aligned_cols=256  Identities=21%  Similarity=0.383  Sum_probs=206.4

Q ss_pred             CCCCcceEEeecCceEEEEEEEcCCCe----EEEEEEeccC-CchhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceE
Q 005257          364 KGFSEENVIGVGGNGKVYKGVLEGGGA----EIAVKRISHE-NDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLM  438 (705)
Q Consensus       364 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~----~vavK~i~~~-~~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~  438 (705)
                      .+|+..++||+|+||+||+|.+..+|+    +||+|+++.. .....++|.+|++++++++|||||+++|+|.+  +..+
T Consensus         9 ~dy~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~--~~~~   86 (317)
T d1xkka_           9 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLT--STVQ   86 (317)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEECC----CCEEEEEEEECC----CTHHHHHHHHHHHHHCCCTTBCCEEEEEES--SSEE
T ss_pred             HHCEEeeEEecCCCeEEEEEEEcCCCCEEEEEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEec--CCee
Confidence            358889999999999999999987665    6899988654 34456789999999999999999999999975  4678


Q ss_pred             EEEeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceec
Q 005257          439 LVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMH  518 (705)
Q Consensus       439 lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~  518 (705)
                      +++||+.+|+|.+++.....  .+++..+++++.|||.||.|||+   ++|+||||||+|||++.++.+||+|||+|+..
T Consensus        87 ~v~e~~~~~~l~~~~~~~~~--~~~~~~~~~i~~qi~~gl~yLH~---~~iiHrDlKp~NIll~~~~~~kl~DFGla~~~  161 (317)
T d1xkka_          87 LITQLMPFGCLLDYVREHKD--NIGSQYLLNWCVQIAKGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLL  161 (317)
T ss_dssp             EEEECCTTCBHHHHHHHTSS--SCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEEEETTEEEECCCSHHHHT
T ss_pred             EEEEeccCCccccccccccc--CCCHHHHHHHHHHHHHHHHHHHH---cCcccCcchhhcceeCCCCCeEeeccccceec
Confidence            89999999999998876533  69999999999999999999999   99999999999999999999999999999877


Q ss_pred             CCCCcce-eeeeeccccCCCccccccCCCCccccEEEEehhHHHHhh-CCCCCCCCCccHHHHHHHHHHhCchhHHHHHh
Q 005257          519 GHGQVAS-TTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLS-GRRPIEEGKPNLVEMVWELMVQGKLLDALDAR  596 (705)
Q Consensus       519 ~~~~~~~-~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~Ellt-G~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~  596 (705)
                      ....... .....||+.|||||++.++.++.++|||||||++|||+| |+.||.......   +...+..+.        
T Consensus       162 ~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~sDvwS~Gvil~el~t~g~~p~~~~~~~~---~~~~i~~~~--------  230 (317)
T d1xkka_         162 GAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE---ISSILEKGE--------  230 (317)
T ss_dssp             TTTCC--------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCGGG---HHHHHHHTC--------
T ss_pred             ccccccccccccccCccccChHHHhcCCCChhhhhhhHHHHHHHHHHCCCCCCCCCCHHH---HHHHHHcCC--------
Confidence            5543322 334578999999999999999999999999999999998 788887654321   122222221        


Q ss_pred             hhcCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHhcc
Q 005257          597 LRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLEGKI  640 (705)
Q Consensus       597 l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~  640 (705)
                       +  ...+..+...+.+++.+||+.||++|||+.|+++.|+...
T Consensus       231 -~--~~~p~~~~~~~~~li~~cl~~dP~~RPs~~eil~~l~~~~  271 (317)
T d1xkka_         231 -R--LPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMA  271 (317)
T ss_dssp             -C--CCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             -C--CCCCcccCHHHHHHHHHhCCCChhhCcCHHHHHHHHHHHH
Confidence             1  2233445567899999999999999999999999987653

>d1ukga_ b.29.1.1 (A:) Legume lectin {Bloodwood tree (Pterocarpus angolensis) [TaxId: 182271]}

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Legume lectin
species: Bloodwood tree (Pterocarpus angolensis) [TaxId: 182271]

Probab=100.00  E-value=1.6e-46  Score=380.72  Aligned_cols=222  Identities=29%  Similarity=0.496  Sum_probs=193.2

Q ss_pred             ceeeEEeCCCCC--CCeEEEcceEeecCcEEecCCC------CCeEEEEEcCCCccccCCCCCcccceEEEEEEEEecCC
Q 005257           24 SAVDFVFNGFNS--SNLSLYGTATVESRILTLTNST------TFTIGRALYPSKIPTKRPNSSYVYPFSTSFIFAMAPYK   95 (705)
Q Consensus        24 ~~~~f~f~~f~~--~~~~~~g~a~~~~~~l~lt~~~------~~~~Gr~~y~~pv~l~~~~~~~~~sF~t~F~f~i~~~~   95 (705)
                      ++++|+|++|++  +||+|+|||.+.++.||||++.      ..++|||+|++||+||++.+++++||+|+|+|.|...+
T Consensus         2 ~~~sF~f~~F~~~~~~l~l~G~A~i~~~~i~LT~~~~~~~~~~~~~G~~~y~~Pi~l~~~~~~~~~sF~t~F~f~i~~~~   81 (241)
T d1ukga_           2 DSLSFGFPTFPSDQKNLIFQGDAQIKNNAVQLTKTDSNGNPVASTVGRILFSAQVHLWEKSSSRVANFQSQFSFSLKSPL   81 (241)
T ss_dssp             CEEEEEESSCCSCCSSEEEEETCEEETTEEECSCBCTTSCBCSSEEEEEEESSCEECEETTTTEEEEEEEEEEEEEECSS
T ss_pred             ccEEEEeCCCCCCCCCEEEeeeEEEeCCEEEeCCCCCCCCccccceEEEEeCCCeecccCCCCceeeeEEEEEEEEecCC
Confidence            578999999964  7899999999999999999865      46999999999999999999999999999999997764


Q ss_pred             CCCCCCceEEEEeeCC-CCCCCCCCCcccccccCC-CCCCCCcEEEEEeecccCCCCC--CCCCCeeEEecCCCcccccc
Q 005257           96 GVLAGHGLVFLFVPFH-GIKGATEAQHLGLFNRTN-DGNSSNHVFGVEFDVFKNQEFN--DIDENHVGIDVNSLTSVSAH  171 (705)
Q Consensus        96 ~~~~g~G~aF~~~~~~-~~~~~~~g~~lGl~~~~~-~~~~~~~~vaVEFDt~~n~~~~--d~~~~Hvgidvns~~S~~~~  171 (705)
                       ..+|||+|||+.|.. ..|....|+++|+++... .+...++.|||||||++|.+.+  ||+++|||||+|++.|.++.
T Consensus        82 -~~~~~g~~f~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~n~~vaVEfDt~~n~~~~~~~~~~~Higid~n~~~s~~~~  160 (241)
T d1ukga_          82 -SNGADGIAFFIAPPDTTIPSGSGGGLLGLFAPGTAQNTSANQVIAVEFDTFYAQDSNTWDPNYPHIGIDVNSIRSVKTV  160 (241)
T ss_dssp             -SSCCCEEEEEEECTTCCCCTTCCGGGTTTSCGGGTTCGGGCCCEEEEEECCCCTTTCTTSCSSCEEEEEESSSSCSEEE
T ss_pred             -CCCCCceEEEEeCCCCCcccccCcccccccccccccCCccCcccceeccCEecCccCCCCCCCccEeeecCCccccccc
Confidence             457999999998854 467778888999987544 4457889999999999987654  58899999999999987663


Q ss_pred             cccccCCCCCCCCCCCCCCCCCCCccccceeecCCCcceEEEEEe--cCceEEEEEEEccCCCCCCCceeeeecCccccc
Q 005257          172 AAGYWPDNQTDSSGSNSNSGTGDDEKSFKELKLNNGKNYQVWIDY--ADSFINITMVEAGMKRPKRPLLSVPLNLSGVLE  249 (705)
Q Consensus       172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~I~Y--~~~~~~v~~~~~~~~~~~~~~ls~~vdl~~~l~  249 (705)
                                                   ...+.+|..++|||+|  ..++|+|++...   +|..|.++..|||+.+||
T Consensus       161 -----------------------------~~~~~~g~~~~v~I~Yd~~~~~L~v~~~~~---~~~~~~l~~~vdL~~~l~  208 (241)
T d1ukga_         161 -----------------------------KWDRRDGQSLNVLVTFNPSTRNLDVVATYS---DGTRYEVSYEVDVRSVLP  208 (241)
T ss_dssp             -----------------------------ECCCCTTCCEEEEEEEETTTTEEEEEEEET---TCCEEEEEEECCGGGTSC
T ss_pred             -----------------------------ccccCCCcEEEEEEEEeCCCcEEEEEEccC---CCCceEEEEEEehHHhCC
Confidence                                         3467899999999999  667899988764   467788999999999999


Q ss_pred             cceecccccccccccccceeeeeeecccc
Q 005257          250 DEMYVGFTAATGQLVESHKILAWSFSNTK  278 (705)
Q Consensus       250 ~~~~vGfsastg~~~~~h~i~~wsf~~~~  278 (705)
                      ++||||||||||...+.|+|++|+|+++.
T Consensus       209 ~~~yvGFSAsTG~~~~~H~IlsWsFss~l  237 (241)
T d1ukga_         209 EWVRVGFSAASGEQYQTHTLESWSFTSTL  237 (241)
T ss_dssp             SEEEEEEEEEESSSCCEEEEEEEEEEEEE
T ss_pred             CcEEEEEEEecCCCCceeEEEEeEEEEEe
Confidence            99999999999999999999999999874

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=7.9e-47  Score=395.09  Aligned_cols=251  Identities=22%  Similarity=0.317  Sum_probs=208.8

Q ss_pred             hCCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCC------chhHHHHHHHHHHhccCCCCCcceeeeeeeeccCc
Q 005257          363 TKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHEN------DGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGS  436 (705)
Q Consensus       363 t~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~------~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~  436 (705)
                      .++|...+.||+|+||+||+|.++.+|+.||||+++...      ....+.+.+|+++|++++||||+++++++.+ ++.
T Consensus         9 ~d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~-~~~   87 (293)
T d1jksa_           9 DDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYEN-KTD   87 (293)
T ss_dssp             GGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEEC-SSE
T ss_pred             ccCEEEeEEEecCCCeEEEEEEECCCCCEEEEEEEEhhhcchhhhhHHHHHHHHHHHHHHhCCCCCCCcEEEEEEE-CCE
Confidence            357899999999999999999999999999999986542      1235789999999999999999999999876 778


Q ss_pred             eEEEEeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCC----Ceeeeee
Q 005257          437 LMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEM----NGRLGDF  512 (705)
Q Consensus       437 ~~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~----~~kL~DF  512 (705)
                      ++||||||++|+|.+++.+.+   .+++.+++.++.|++.||+|||+   ++|+||||||+|||++.++    .+||+||
T Consensus        88 ~~iv~E~~~gg~L~~~i~~~~---~l~~~~~~~~~~qi~~al~yLH~---~~ivHrDiKp~Nill~~~~~~~~~vkl~Df  161 (293)
T d1jksa_          88 VILILELVAGGELFDFLAEKE---SLTEEEATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDF  161 (293)
T ss_dssp             EEEEEECCCSCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEESCSSSSSCCEEECCC
T ss_pred             EEEEEEcCCCccccchhcccc---ccchhHHHHHHHHHHHHHHhhhh---cceeecccccceEEEecCCCcccceEecch
Confidence            999999999999999997654   69999999999999999999999   9999999999999998776    4999999


Q ss_pred             ccceecCCCCcceeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCch--h
Q 005257          513 GLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKL--L  590 (705)
Q Consensus       513 Gla~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~--~  590 (705)
                      |+++.......  .....||+.|||||++.+..++.++|||||||++|||++|+.||.+....   .....+..+..  .
T Consensus       162 G~a~~~~~~~~--~~~~~~t~~y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~---~~~~~i~~~~~~~~  236 (293)
T d1jksa_         162 GLAHKIDFGNE--FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQ---ETLANVSAVNYEFE  236 (293)
T ss_dssp             TTCEECTTSCB--CSCCCCCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH---HHHHHHHTTCCCCC
T ss_pred             hhhhhcCCCcc--ccccCCCCcccCHHHHcCCCCCCcccchhhhHHHHHHHcCCCCCCCCCHH---HHHHHHHhcCCCCC
Confidence            99988754432  23357899999999999989999999999999999999999999865431   12222222221  1


Q ss_pred             HHHHHhhhcCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 005257          591 DALDARLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKV  635 (705)
Q Consensus       591 ~~id~~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  635 (705)
                      ....      .    .....+.+++..||+.||++|||++|++++
T Consensus       237 ~~~~------~----~~s~~~~~li~~~L~~dP~~R~s~~eil~h  271 (293)
T d1jksa_         237 DEYF------S----NTSALAKDFIRRLLVKDPKKRMTIQDSLQH  271 (293)
T ss_dssp             HHHH------T----TSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred             chhc------C----CCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence            1110      1    123467889999999999999999999873

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.1e-47  Score=402.93  Aligned_cols=263  Identities=25%  Similarity=0.368  Sum_probs=205.0

Q ss_pred             hCCCCcceEEeecCceEEEEEEEcC-----CCeEEEEEEeccCC-chhHHHHHHHHHHhccC-CCCCcceeeeeeeeccC
Q 005257          363 TKGFSEENVIGVGGNGKVYKGVLEG-----GGAEIAVKRISHEN-DGGTRAFLAEISSLGRL-KHKSLVGLRGWCKREKG  435 (705)
Q Consensus       363 t~~f~~~~~LG~G~fg~Vy~~~~~~-----~~~~vavK~i~~~~-~~~~~~~~~Ei~~l~~l-~Hpniv~l~g~~~~~~~  435 (705)
                      .++|+..++||+|+||.||+|.+..     +++.||||+++... ....+.+.+|..++.++ +|+||+.+++++...+.
T Consensus        12 ~~~y~~~~~iG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~   91 (299)
T d1ywna1          12 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGG   91 (299)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEEESTTSSSCEEEEEEEEC----CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTS
T ss_pred             HHHEEEeeEEeecCCeEEEEEEEcCCCcccCCeEEEEEEEccccCcHHHHHHHHHHHHHHhhcCCCeEEEeeeeeccCCC
Confidence            3568889999999999999999754     34789999987543 34566788898888887 68999999999887677


Q ss_pred             ceEEEEeeCCCCChhHHHHhcCC-------------CCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEc
Q 005257          436 SLMLVYDYMENGSLDKWIFQCDG-------------SMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLD  502 (705)
Q Consensus       436 ~~~lV~E~~~~gsL~~~L~~~~~-------------~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld  502 (705)
                      .+++|||||++|+|.++|+....             ...+++.+++.++.||+.||.|||+   ++|+||||||+||||+
T Consensus        92 ~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~---~~ivHrDlKp~NILl~  168 (299)
T d1ywna1          92 PLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLAS---RKCIHRDLAARNILLS  168 (299)
T ss_dssp             CCEEEEECCTTCBHHHHHHHTGGGBCC-----------CBCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEEC
T ss_pred             eEEEEEEecCCCcHHHHHHhccccccccccchhhhhcccCCHHHHHHHHHHHHHHHHHHHh---CCCcCCcCCccceeEC
Confidence            89999999999999999975421             2358999999999999999999999   9999999999999999


Q ss_pred             cCCCeeeeeeccceecCCCCc-ceeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhhCC-CCCCCCCccHHHHH
Q 005257          503 KEMNGRLGDFGLARMHGHGQV-ASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGR-RPIEEGKPNLVEMV  580 (705)
Q Consensus       503 ~~~~~kL~DFGla~~~~~~~~-~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~-~Pf~~~~~~~~~~v  580 (705)
                      +++++||+|||+|+....... .......||+.|||||++.+..++.++|||||||++|||+||. .||......  +.+
T Consensus       169 ~~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~sDiwS~Gvil~ellt~~~~p~~~~~~~--~~~  246 (299)
T d1ywna1         169 EKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID--EEF  246 (299)
T ss_dssp             GGGCEEECC------CCSCTTSCCTTSCCCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCCS--HHH
T ss_pred             CCCcEEEccCcchhhccccccccccCceeeCccccchhHhhcCCCCcccceeehHHHHHHHHhCCCCCCCCCCHH--HHH
Confidence            999999999999987654332 2234468999999999999999999999999999999999865 567654322  222


Q ss_pred             HHHHHhCchhHHHHHhhhcCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHhccc
Q 005257          581 WELMVQGKLLDALDARLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLEGKIE  641 (705)
Q Consensus       581 ~~~~~~~~~~~~id~~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~  641 (705)
                      ...+..+..           ...+......+.+++.+||+.||++|||+.|++++|+.+++
T Consensus       247 ~~~~~~~~~-----------~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~eil~~L~~ilq  296 (299)
T d1ywna1         247 CRRLKEGTR-----------MRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ  296 (299)
T ss_dssp             HHHHHHTCC-----------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             HHHHhcCCC-----------CCCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHh
Confidence            233333221           22233345678899999999999999999999999997765

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.3e-48  Score=396.95  Aligned_cols=251  Identities=30%  Similarity=0.421  Sum_probs=200.3

Q ss_pred             CCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCCchhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEEEEee
Q 005257          364 KGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDY  443 (705)
Q Consensus       364 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~lV~E~  443 (705)
                      ++|+..+.||+|+||.||+|.++  |..||||+++..  ...+.|.+|++++++++||||++++|+|.+.++.+++||||
T Consensus         7 ~~~~~~~~lG~G~fg~Vy~~~~~--~~~vAvK~i~~~--~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~~lv~ey   82 (262)
T d1byga_           7 KELKLLQTIGKGEFGDVMLGDYR--GNKVAVKCIKND--ATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEY   82 (262)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEET--TEEEEEEECCCC--C--HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEECC
T ss_pred             HHeEEeEEEecCCCeEEEEEEEC--CeEEEEEEECcH--HHHHHHHHHHHHHHhCCCCCEeeEEEEEEecCCcEEEEEec
Confidence            45677899999999999999985  678999999643  34578999999999999999999999997656778999999


Q ss_pred             CCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecCCCCc
Q 005257          444 MENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQV  523 (705)
Q Consensus       444 ~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~~~~~  523 (705)
                      +++|+|.++|.+... ..+++..+++++.||+.||.|||+   .+|+||||||+|||++.++.+||+|||+++.....  
T Consensus        83 ~~~g~L~~~l~~~~~-~~l~~~~~~~i~~~i~~al~ylH~---~~ivH~dlkp~Nil~~~~~~~kl~dfg~s~~~~~~--  156 (262)
T d1byga_          83 MAKGSLVDYLRSRGR-SVLGGDCLLKFSLDVCEAMEYLEG---NNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASST--  156 (262)
T ss_dssp             CTTEEHHHHHHHHHH-HHCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECTTSCEEECCCCC---------
T ss_pred             cCCCCHHHHHHhcCC-CCCCHHHHHHHHHHHHhhcccccc---CceeccccchHhheecCCCCEeecccccceecCCC--
Confidence            999999999976432 258999999999999999999998   99999999999999999999999999999865432  


Q ss_pred             ceeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhh-CCCCCCCCCccHHHHHHHHHHhCchhHHHHHhhhcCCC
Q 005257          524 ASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLS-GRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRAKGG  602 (705)
Q Consensus       524 ~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~Ellt-G~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~l~~~~~  602 (705)
                        .....+|..|+|||++.++.++.++|||||||++|||+| |+.||.......   +...+..+.         +  ..
T Consensus       157 --~~~~~~~~~y~aPE~l~~~~~t~~sDIwSfG~il~el~t~~~~p~~~~~~~~---~~~~i~~~~---------~--~~  220 (262)
T d1byga_         157 --QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKD---VVPRVEKGY---------K--MD  220 (262)
T ss_dssp             -------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGGG---HHHHHTTTC---------C--CC
T ss_pred             --CccccccccCCChHHHhCCCCChHHHHHhHHHHHHHHHHCCCCCCCCCCHHH---HHHHHHcCC---------C--CC
Confidence              223467999999999999999999999999999999998 677776543321   111122221         1  23


Q ss_pred             CCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHhcc
Q 005257          603 FDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLEGKI  640 (705)
Q Consensus       603 ~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~  640 (705)
                      .+......+.+++.+||+.||++||||.++++.|+.+.
T Consensus       221 ~~~~~~~~~~~li~~cl~~dP~~Rps~~~l~~~L~~i~  258 (262)
T d1byga_         221 APDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHIK  258 (262)
T ss_dssp             CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             CCccCCHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHH
Confidence            34445567889999999999999999999999998653

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.9e-47  Score=404.16  Aligned_cols=249  Identities=24%  Similarity=0.337  Sum_probs=210.7

Q ss_pred             CCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccC---CchhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEEE
Q 005257          364 KGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHE---NDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLV  440 (705)
Q Consensus       364 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~---~~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~lV  440 (705)
                      ++|...+.||+|+||+||+|+++.+++.||||++++.   .....+.+.+|+++|++++||||+++++++.+ ++.+++|
T Consensus         5 ~dy~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~-~~~~~iv   83 (337)
T d1o6la_           5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQT-HDRLCFV   83 (337)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEEC-SSEEEEE
T ss_pred             HhcEEEEEEecCcCeEEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhCCCCCEEEEEeeecc-ccccccc
Confidence            5688899999999999999999999999999999754   23356778999999999999999999998886 6789999


Q ss_pred             EeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecCC
Q 005257          441 YDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGH  520 (705)
Q Consensus       441 ~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~~  520 (705)
                      ||||++|+|.+++.+..   .+++..++.++.||+.||+|||+   ++|+||||||+|||++.++.+||+|||+|+....
T Consensus        84 ~ey~~gg~L~~~~~~~~---~~~e~~~~~~~~qil~al~ylH~---~~iiHRDlKP~NILl~~~g~vkl~DFG~a~~~~~  157 (337)
T d1o6la_          84 MEYANGGELFFHLSRER---VFTEERARFYGAEIVSALEYLHS---RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGIS  157 (337)
T ss_dssp             EECCTTCBHHHHHHHHS---CCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTSCEEECCCTTCBCSCC
T ss_pred             eeccCCCchhhhhhccc---CCcHHHHHHHHHHHhhhhhhhhh---cCccccccCHHHeEecCCCCEEEeeccccccccc
Confidence            99999999999997654   68999999999999999999999   9999999999999999999999999999986644


Q ss_pred             CCcceeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhHHHHHhhhcC
Q 005257          521 GQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRAK  600 (705)
Q Consensus       521 ~~~~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~l~~~  600 (705)
                      ... .....+||+.|||||++.+..++.++||||+||++|||++|+.||......   .+...+..+.            
T Consensus       158 ~~~-~~~~~~GT~~Y~aPE~~~~~~y~~~~DiwSlGvilyeml~G~~pf~~~~~~---~~~~~i~~~~------------  221 (337)
T d1o6la_         158 DGA-TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE---RLFELILMEE------------  221 (337)
T ss_dssp             TTC-CBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHH---HHHHHHHHCC------------
T ss_pred             CCc-ccccceeCHHHhhhhhccCCCCChhhcccchhhHHHHHHHCCCCCCCcCHH---HHHHHHhcCC------------
Confidence            322 234468999999999999999999999999999999999999999875531   2222222221            


Q ss_pred             CCCCHHHHHHHHHHHHHcCCCCCCCCCC-----HHHHHHH
Q 005257          601 GGFDEDEVERVLHLGLLCAYPDPRARPT-----MRQVVKV  635 (705)
Q Consensus       601 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPs-----~~evl~~  635 (705)
                      ..++......+.+++..||++||.+||+     +.|++++
T Consensus       222 ~~~p~~~s~~~~dli~~~L~~dP~~R~~~~~~~~~eil~H  261 (337)
T d1o6la_         222 IRFPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEH  261 (337)
T ss_dssp             CCCCTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTS
T ss_pred             CCCCccCCHHHHHHHHhhccCCchhhcccccccHHHHHcC
Confidence            2233334456789999999999999995     7777763

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=8.1e-47  Score=397.95  Aligned_cols=255  Identities=27%  Similarity=0.416  Sum_probs=207.2

Q ss_pred             ceEEeecCceEEEEEEEcCCC---eEEEEEEeccC-CchhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEEEEeeC
Q 005257          369 ENVIGVGGNGKVYKGVLEGGG---AEIAVKRISHE-NDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDYM  444 (705)
Q Consensus       369 ~~~LG~G~fg~Vy~~~~~~~~---~~vavK~i~~~-~~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~lV~E~~  444 (705)
                      .++||+|+||+||+|.+..++   ..||||+++.. .....++|.+|+++|++++||||++++|+|...++..++|||||
T Consensus        32 ~~~iG~G~fg~Vyk~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~~lv~E~~  111 (311)
T d1r0pa_          32 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYM  111 (311)
T ss_dssp             EEEEEEETTEEEEEEEECC----CEEEEEEEECCCCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEETTTEEEEEEECC
T ss_pred             ceEEeecCCeEEEEEEEECCCCEEEEEEEEEECcccCHHHHHHHHHHHHHHHhCCCCCEeEEeEEEEecCCceEEEEEEe
Confidence            578999999999999986543   46999999754 44556789999999999999999999999987677899999999


Q ss_pred             CCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecCCCCcc
Q 005257          445 ENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQVA  524 (705)
Q Consensus       445 ~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~~~~~~  524 (705)
                      ++|+|.+++.....  .+++.++++++.|++.||.|||+   .+|+||||||+|||+++++.+||+|||+++........
T Consensus       112 ~~g~l~~~~~~~~~--~~~~~~~~~i~~qia~gL~~lH~---~~iiHrDLK~~NILl~~~~~~kL~DFG~~~~~~~~~~~  186 (311)
T d1r0pa_         112 KHGDLRNFIRNETH--NPTVKDLIGFGLQVAKGMKFLAS---KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFD  186 (311)
T ss_dssp             TTCBHHHHHHCTTC--CCBHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECTTCCEEECSSGGGCCTTTTTCC
T ss_pred             ecCchhhhhccccc--cchHHHHHHHHHHHHHhhhhhcc---cCcccCCccHHhEeECCCCCEEEecccchhhccccccc
Confidence            99999999875433  57889999999999999999998   99999999999999999999999999999876543322


Q ss_pred             ---eeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhHHHHHhhhcCC
Q 005257          525 ---STTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRAKG  601 (705)
Q Consensus       525 ---~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~l~~~~  601 (705)
                         ......||+.|+|||.+.++.++.++|||||||++|||+||+.||...... . .+...+..+..           .
T Consensus       187 ~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDI~SfGivl~El~t~~~p~~~~~~~-~-~~~~~i~~g~~-----------~  253 (311)
T d1r0pa_         187 SVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNT-F-DITVYLLQGRR-----------L  253 (311)
T ss_dssp             CTTCTTCSSCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCC--------CHHHHHTTCC-----------C
T ss_pred             cceecccccccccccChHHHhcCCCCChhHhhhhHHHHHHHHHCCCCCCCCCCH-H-HHHHHHHcCCC-----------C
Confidence               223357899999999999999999999999999999999988887654321 1 11122222221           1


Q ss_pred             CCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHhccc
Q 005257          602 GFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLEGKIE  641 (705)
Q Consensus       602 ~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~  641 (705)
                      ..+....+.+.+++..||+.||++||+|.||++.|++...
T Consensus       254 ~~p~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~L~~i~~  293 (311)
T d1r0pa_         254 LQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFS  293 (311)
T ss_dssp             CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             CCcccCcHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHH
Confidence            1223344678899999999999999999999999987765

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=7.4e-47  Score=398.30  Aligned_cols=258  Identities=27%  Similarity=0.432  Sum_probs=207.5

Q ss_pred             CCCCcceEEeecCceEEEEEEEcCCCe--EEEEEEeccC-CchhHHHHHHHHHHhccC-CCCCcceeeeeeeeccCceEE
Q 005257          364 KGFSEENVIGVGGNGKVYKGVLEGGGA--EIAVKRISHE-NDGGTRAFLAEISSLGRL-KHKSLVGLRGWCKREKGSLML  439 (705)
Q Consensus       364 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~--~vavK~i~~~-~~~~~~~~~~Ei~~l~~l-~Hpniv~l~g~~~~~~~~~~l  439 (705)
                      ++|+..++||+|+||+||+|+++.++.  .||||+++.. .....++|.+|+++|.++ +||||++++++|.. ++.+++
T Consensus        10 ~~~~~~~~iG~G~fg~Vy~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~-~~~~~i   88 (309)
T d1fvra_          10 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEH-RGYLYL   88 (309)
T ss_dssp             GGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEE-TTEEEE
T ss_pred             HHcEEEEEEeeCCCcEEEEEEECCCCeEEEEEEEEECcccChHHHHHHHHHHHHHHhccCCCCEeeEEEEEec-CCeeEE
Confidence            567788999999999999999988776  4788887644 344566899999999999 79999999999986 778999


Q ss_pred             EEeeCCCCChhHHHHhcC-------------CCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCC
Q 005257          440 VYDYMENGSLDKWIFQCD-------------GSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMN  506 (705)
Q Consensus       440 V~E~~~~gsL~~~L~~~~-------------~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~  506 (705)
                      ||||+++|+|.++|+...             ....+++.++.+++.|||.||.|||+   ++|+||||||+|||++.++.
T Consensus        89 V~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~~lH~---~~iiHrDlkp~NIL~~~~~~  165 (309)
T d1fvra_          89 AIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQ---KQFIHRDLAARNILVGENYV  165 (309)
T ss_dssp             EECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECGGGC
T ss_pred             EEEecCCCcHHHHHhhccccccchhhhccccccCCCCHHHHHHHHHHHHHHHHhhhc---CCccccccccceEEEcCCCc
Confidence            999999999999997531             23479999999999999999999999   99999999999999999999


Q ss_pred             eeeeeeccceecCCCCcceeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhhCCC-CCCCCCccHHHHHHHHHH
Q 005257          507 GRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRR-PIEEGKPNLVEMVWELMV  585 (705)
Q Consensus       507 ~kL~DFGla~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~-Pf~~~~~~~~~~v~~~~~  585 (705)
                      +||+|||+++.......  .....||..|+|||.+.++.++.++|||||||++|||++|.. ||.....   ..+.+.+.
T Consensus       166 ~kl~DfG~a~~~~~~~~--~~~~~gt~~y~aPE~l~~~~~~~~sDvwSfGvil~ell~~~~~p~~~~~~---~~~~~~i~  240 (309)
T d1fvra_         166 AKIADFGLSRGQEVYVK--KTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTC---AELYEKLP  240 (309)
T ss_dssp             EEECCTTCEESSCEECC--C----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCH---HHHHHHGG
T ss_pred             eEEcccccccccccccc--ccceecCCcccchHHhccCCCCccceeehhHHHHHHHHhcCCCCCCCCCH---HHHHHHHH
Confidence            99999999986543222  223568999999999999999999999999999999999765 5654332   12222222


Q ss_pred             hCchhHHHHHhhhcCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHhccc
Q 005257          586 QGKLLDALDARLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLEGKIE  641 (705)
Q Consensus       586 ~~~~~~~id~~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~  641 (705)
                      ++.         +  ...+....+.+.+++.+||+.||++||||.||++.|++.++
T Consensus       241 ~~~---------~--~~~~~~~~~~~~~li~~cl~~dP~~RPs~~eil~~L~~i~~  285 (309)
T d1fvra_         241 QGY---------R--LEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLE  285 (309)
T ss_dssp             GTC---------C--CCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             hcC---------C--CCCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHh
Confidence            221         1  22334455678999999999999999999999999987765

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=100.00  E-value=2.8e-46  Score=387.73  Aligned_cols=259  Identities=21%  Similarity=0.331  Sum_probs=205.0

Q ss_pred             hCCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCC---chhHHHHHHHHHHhccCCCCCcceeeeeeeeccC---c
Q 005257          363 TKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHEN---DGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKG---S  436 (705)
Q Consensus       363 t~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~---~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~---~  436 (705)
                      .++|+..+.||+|+||+||+|.+..+++.||||+++...   ....+.+.+|++++++++||||+++++++.....   .
T Consensus         6 ~drY~i~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~~l~~~~hpniv~~~~~~~~~~~~~~~   85 (277)
T d1o6ya_           6 SDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPL   85 (277)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTTTCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEECSSSEE
T ss_pred             cceeEEeEEEeeCCCeEEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhcCCCCCCcccceeeeccCCCce
Confidence            467999999999999999999999999999999997653   2345679999999999999999999998875332   4


Q ss_pred             eEEEEeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccce
Q 005257          437 LMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLAR  516 (705)
Q Consensus       437 ~~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~  516 (705)
                      +|+||||+++|+|.+++...+   .+++.+++.++.||+.||+|||+   ++|+||||||+|||++.++..+|+|||.++
T Consensus        86 ~~lvmE~~~g~~L~~~~~~~~---~l~~~~~~~i~~qi~~al~~lH~---~~iiHrDiKP~NIll~~~~~~~l~d~~~~~  159 (277)
T d1o6ya_          86 PYIVMEYVDGVTLRDIVHTEG---PMTPKRAIEVIADACQALNFSHQ---NGIIHRDVKPANIMISATNAVKVMDFGIAR  159 (277)
T ss_dssp             EEEEEECCCEEEHHHHHHHHC---SCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEEETTSCEEECCCTTCE
T ss_pred             EEEEEECCCCCEehhhhcccC---CCCHHHHHHHHHHHHHHHHHHHh---CCccCccccCcccccCccccceeehhhhhh
Confidence            789999999999999987654   69999999999999999999998   999999999999999999999999999987


Q ss_pred             ecCCCCc--ceeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhHHHH
Q 005257          517 MHGHGQV--ASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALD  594 (705)
Q Consensus       517 ~~~~~~~--~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~~id  594 (705)
                      .......  ......+||+.|||||++.+..++.++|||||||++|||+||+.||.....  .+.....+..+....   
T Consensus       160 ~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~--~~~~~~~~~~~~~~~---  234 (277)
T d1o6ya_         160 AIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSP--VSVAYQHVREDPIPP---  234 (277)
T ss_dssp             ECC----------------TTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSH--HHHHHHHHHCCCCCG---
T ss_pred             hhccccccccccccccCcccccCHHHHcCCCCCcceecccchHHHHHHHhCCCCCCCcCH--HHHHHHHHhcCCCCC---
Confidence            6543322  233446899999999999999999999999999999999999999986543  222223332222110   


Q ss_pred             HhhhcCCCCCHHHHHHHHHHHHHcCCCCCCCCC-CHHHHHHHHHh
Q 005257          595 ARLRAKGGFDEDEVERVLHLGLLCAYPDPRARP-TMRQVVKVLEG  638 (705)
Q Consensus       595 ~~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RP-s~~evl~~L~~  638 (705)
                            ........+.+.+++.+||++||++|| |++++++.|..
T Consensus       235 ------~~~~~~~s~~l~~li~~~L~~dp~~R~~sa~~l~~~l~r  273 (277)
T d1o6ya_         235 ------SARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVR  273 (277)
T ss_dssp             ------GGTSSSCCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHH
T ss_pred             ------chhccCCCHHHHHHHHHHccCCHhHCHhHHHHHHHHHHH
Confidence                  001112335688899999999999999 89999887764

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=3e-46  Score=399.72  Aligned_cols=245  Identities=23%  Similarity=0.287  Sum_probs=208.0

Q ss_pred             CCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccC---CchhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEEE
Q 005257          364 KGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHE---NDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLV  440 (705)
Q Consensus       364 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~---~~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~lV  440 (705)
                      ++|+..+.||+|+||.||+|.++.+|+.||||++...   .....+.+.+|+++|+.++||||+++++++.. ...+++|
T Consensus        41 d~y~i~~~lG~G~fg~Vy~a~~~~~g~~~AvK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~-~~~~~~v  119 (350)
T d1rdqe_          41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKD-NSNLYMV  119 (350)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEEC-SSEEEEE
T ss_pred             cCeEEEEEeecCcCcEEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHHcCCCcEeeccccccc-ccccccc
Confidence            5789999999999999999999999999999998643   23345678999999999999999999998876 6788999


Q ss_pred             EeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecCC
Q 005257          441 YDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGH  520 (705)
Q Consensus       441 ~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~~  520 (705)
                      |||+.+|+|..++.+.+   .+++.++..++.||+.||.|||+   ++||||||||+|||++.++.+||+|||+|+....
T Consensus       120 ~e~~~~g~l~~~l~~~~---~l~e~~~~~i~~qi~~aL~yLH~---~~iiHRDIKP~NILl~~~g~ikL~DFG~a~~~~~  193 (350)
T d1rdqe_         120 MEYVAGGEMFSHLRRIG---RFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG  193 (350)
T ss_dssp             EECCTTCBHHHHHHHHC---CCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCCTTCEECSS
T ss_pred             cccccccchhhhHhhcC---CCCHHHHHHHHHHHHHHHHHHHh---CCEecCcCCHHHcccCCCCCEEeeeceeeeeccc
Confidence            99999999999997654   69999999999999999999998   9999999999999999999999999999997654


Q ss_pred             CCcceeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhHHHHHhhhcC
Q 005257          521 GQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRAK  600 (705)
Q Consensus       521 ~~~~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~l~~~  600 (705)
                      .    .....||+.|||||++.+..++.++|||||||++|||++|+.||.....   ......+..+.            
T Consensus       194 ~----~~~~~Gt~~Y~APE~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~---~~~~~~i~~~~------------  254 (350)
T d1rdqe_         194 R----TWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP---IQIYEKIVSGK------------  254 (350)
T ss_dssp             C----BCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH---HHHHHHHHHCC------------
T ss_pred             c----cccccCccccCCHHHHcCCCCCccccccchhHHHHHHHhCCCCCCCcCH---HHHHHHHhcCC------------
Confidence            3    2336899999999999999999999999999999999999999976542   11222222221            


Q ss_pred             CCCCHHHHHHHHHHHHHcCCCCCCCCC-----CHHHHHH
Q 005257          601 GGFDEDEVERVLHLGLLCAYPDPRARP-----TMRQVVK  634 (705)
Q Consensus       601 ~~~~~~~~~~l~~l~~~Cl~~dP~~RP-----s~~evl~  634 (705)
                      ...+......+.+++..||+.||.+|+     |+.++++
T Consensus       255 ~~~p~~~s~~~~~li~~~L~~dP~kR~~~~r~t~~ell~  293 (350)
T d1rdqe_         255 VRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKN  293 (350)
T ss_dssp             CCCCTTCCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHT
T ss_pred             CCCCccCCHHHHHHHHHHhhhCHHhccccccccHHHHHc
Confidence            222333445688999999999999994     8888876

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.1e-46  Score=389.80  Aligned_cols=255  Identities=23%  Similarity=0.346  Sum_probs=199.0

Q ss_pred             CCCCcceEEeecCceEEEEEEEcCC---CeEEEEEEeccC---CchhHHHHHHHHHHhccCCCCCcceeeeeeeeccCce
Q 005257          364 KGFSEENVIGVGGNGKVYKGVLEGG---GAEIAVKRISHE---NDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSL  437 (705)
Q Consensus       364 ~~f~~~~~LG~G~fg~Vy~~~~~~~---~~~vavK~i~~~---~~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~  437 (705)
                      ++|+..+.||+|+||+||+|.+...   ...||||+++..   ..+..++|.+|+++|++++||||++++|+|.+  +..
T Consensus         8 ~d~~~~~~iG~G~fg~Vy~~~~~~~~~~~~~vAiK~l~~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~~~g~~~~--~~~   85 (273)
T d1u46a_           8 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLT--PPM   85 (273)
T ss_dssp             GGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECS--SSC
T ss_pred             HHeEEEEEEecCCCeEEEEEEEECCCCcEEEEEEEEEChhhcCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEee--cch
Confidence            4578889999999999999987533   247999998654   33456789999999999999999999999964  467


Q ss_pred             EEEEeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeecccee
Q 005257          438 MLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARM  517 (705)
Q Consensus       438 ~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~  517 (705)
                      ++||||+++|+|.+++.....  .+++..+++++.|+|.||.|||+   ++|+||||||+|||++.++.+||+|||+++.
T Consensus        86 ~lv~e~~~~~~l~~~~~~~~~--~l~~~~~~~~~~qi~~gl~ylH~---~~iiHrDikp~NIll~~~~~vkl~DfGl~~~  160 (273)
T d1u46a_          86 KMVTELAPLGSLLDRLRKHQG--HFLLGTLSRYAVQVAEGMGYLES---KRFIHRDLAARNLLLATRDLVKIGDFGLMRA  160 (273)
T ss_dssp             EEEEECCTTCBHHHHHHHHGG--GSCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEEEETTEEEECCCTTCEE
T ss_pred             heeeeeecCcchhhhhhcccC--CCCHHHHHHHHHHHHHHHHHhhh---CCEeeeeecHHHhccccccceeeccchhhhh
Confidence            899999999999998876433  69999999999999999999998   9999999999999999999999999999998


Q ss_pred             cCCCCcce--eeeeeccccCCCccccccCCCCccccEEEEehhHHHHhh-CCCCCCCCCccHHHHHHHHHHhCchhHHHH
Q 005257          518 HGHGQVAS--TTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLS-GRRPIEEGKPNLVEMVWELMVQGKLLDALD  594 (705)
Q Consensus       518 ~~~~~~~~--~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~Ellt-G~~Pf~~~~~~~~~~v~~~~~~~~~~~~id  594 (705)
                      ........  .....|+..|+|||++.+..++.++|||||||++|||+| |+.||......  +........+..     
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~S~Gvil~emlt~G~~Pf~~~~~~--~~~~~i~~~~~~-----  233 (273)
T d1u46a_         161 LPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGS--QILHKIDKEGER-----  233 (273)
T ss_dssp             CCC-CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHH--HHHHHHHTSCCC-----
T ss_pred             cccCCCcceecCccccCcccCCHHHHhCCCCCcchhhhhhHHHHHHHHhCCCCCCCCcCHH--HHHHHHHhCCCC-----
Confidence            75543322  233567889999999999999999999999999999998 89999765432  222222222111     


Q ss_pred             HhhhcCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHh
Q 005257          595 ARLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLEG  638 (705)
Q Consensus       595 ~~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~  638 (705)
                            ...+...+..+.+++.+||+.||++||||.||.+.|.+
T Consensus       234 ------~~~~~~~~~~l~~li~~cl~~dp~~RPt~~ei~~~L~~  271 (273)
T d1u46a_         234 ------LPRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLE  271 (273)
T ss_dssp             ------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             ------CCCcccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHh
Confidence                  12223344678899999999999999999999998874

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=100.00  E-value=5e-46  Score=385.28  Aligned_cols=252  Identities=25%  Similarity=0.392  Sum_probs=208.2

Q ss_pred             CCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCCch---------hHHHHHHHHHHhccCC-CCCcceeeeeeeec
Q 005257          364 KGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDG---------GTRAFLAEISSLGRLK-HKSLVGLRGWCKRE  433 (705)
Q Consensus       364 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~~---------~~~~~~~Ei~~l~~l~-Hpniv~l~g~~~~~  433 (705)
                      ++|+..+.||+|+||+||+|++..+++.||||+++.....         ..+.+.+|+.++++++ ||||+++++++.+ 
T Consensus         3 ~~y~~~~~iG~G~~g~V~~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~-   81 (277)
T d1phka_           3 ENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYET-   81 (277)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEEC-
T ss_pred             ccCEEceEEecCcCeEEEEEEECCCCCEEEEEEEecccccchhHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeeccc-
Confidence            5788899999999999999999999999999999765321         2345889999999997 9999999999876 


Q ss_pred             cCceEEEEeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeec
Q 005257          434 KGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFG  513 (705)
Q Consensus       434 ~~~~~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFG  513 (705)
                      ++.++|||||+++|+|.++|....   .+++.++..++.||+.||+|||+   ++|+||||||+|||++.++.+||+|||
T Consensus        82 ~~~~~ivmE~~~~g~L~~~l~~~~---~l~e~~~~~~~~qi~~al~~lH~---~~ivHrDlkp~Nill~~~~~~kl~DFG  155 (277)
T d1phka_          82 NTFFFLVFDLMKKGELFDYLTEKV---TLSEKETRKIMRALLEVICALHK---LNIVHRDLKPENILLDDDMNIKLTDFG  155 (277)
T ss_dssp             SSEEEEEEECCTTCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTCCEEECCCT
T ss_pred             CcceEEEEEcCCCchHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHH---cCCcccccccceEEEcCCCCeEEccch
Confidence            778999999999999999997644   69999999999999999999998   999999999999999999999999999


Q ss_pred             cceecCCCCcceeeeeeccccCCCcccccc------CCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhC
Q 005257          514 LARMHGHGQVASTTRVVGTVGYLAPEVFSS------GRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQG  587 (705)
Q Consensus       514 la~~~~~~~~~~~~~~~gt~~y~APE~~~~------~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~  587 (705)
                      +++.......  .+...||+.|+|||++.+      ..++.++||||+||++|||++|+.||.....   ......+..+
T Consensus       156 ~a~~~~~~~~--~~~~~gt~~y~~PE~~~~~~~~~~~~~~~~~DiwslGvilyeml~g~~Pf~~~~~---~~~~~~i~~~  230 (277)
T d1phka_         156 FSCQLDPGEK--LREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQ---MLMLRMIMSG  230 (277)
T ss_dssp             TCEECCTTCC--BCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH---HHHHHHHHHT
T ss_pred             heeEccCCCc--eeeeeccCCCCCHHHhhccccccCCCCCchheEcccchhhhhhccCCCCCCCCCH---HHHHHHHHhC
Confidence            9998765432  234689999999999853      3468899999999999999999999987543   2222333333


Q ss_pred             chhHHHHHhhhcCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 005257          588 KLLDALDARLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKV  635 (705)
Q Consensus       588 ~~~~~id~~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  635 (705)
                      ....        .........+.+.+++.+||++||++|||+.|++++
T Consensus       231 ~~~~--------~~~~~~~~s~~~~~li~~~L~~~p~~R~s~~eil~h  270 (277)
T d1phka_         231 NYQF--------GSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAH  270 (277)
T ss_dssp             CCCC--------CTTTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTTS
T ss_pred             CCCC--------CCcccccCCHHHHHHHHHHccCChhHCcCHHHHHcC
Confidence            2210        011112334578899999999999999999998764

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.8e-46  Score=395.77  Aligned_cols=263  Identities=24%  Similarity=0.390  Sum_probs=213.6

Q ss_pred             HhCCCCcceEEeecCceEEEEEEEc-----CCCeEEEEEEeccCCc-hhHHHHHHHHHHhccC-CCCCcceeeeeeeecc
Q 005257          362 ATKGFSEENVIGVGGNGKVYKGVLE-----GGGAEIAVKRISHEND-GGTRAFLAEISSLGRL-KHKSLVGLRGWCKREK  434 (705)
Q Consensus       362 at~~f~~~~~LG~G~fg~Vy~~~~~-----~~~~~vavK~i~~~~~-~~~~~~~~Ei~~l~~l-~Hpniv~l~g~~~~~~  434 (705)
                      ..++|+..++||+|+||.||+|++.     .+++.||||+++.... ....+|.+|+.+++++ +|||||+++++|.. +
T Consensus        21 ~~~~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~E~~~~~~l~~HpnIv~~~g~~~~-~   99 (311)
T d1t46a_          21 PRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTI-G   99 (311)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS-S
T ss_pred             CHHHeEEeeEEeecCCeEEEEEEEeccccCCCCeEEEEEEECcccCHHHHHHHHHHHHHHHhccCCCCEEEEEEEEee-C
Confidence            3467888999999999999999874     3567899999976543 4556799999999999 69999999999976 6


Q ss_pred             CceEEEEeeCCCCChhHHHHhcCC---------------CCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCe
Q 005257          435 GSLMLVYDYMENGSLDKWIFQCDG---------------SMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNV  499 (705)
Q Consensus       435 ~~~~lV~E~~~~gsL~~~L~~~~~---------------~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NI  499 (705)
                      ..+++||||+++|+|.++++....               ...+++.++.+++.||+.||+|||+   ++++||||||+||
T Consensus       100 ~~~~lvmE~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~~LH~---~~ivHrDLKp~NI  176 (311)
T d1t46a_         100 GPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLAS---KNCIHRDLAARNI  176 (311)
T ss_dssp             SSCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGE
T ss_pred             CEEEEEEEcCCCCCHHHHHHhccccccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHh---CCeeecccccccc
Confidence            678999999999999999976431               2358999999999999999999999   9999999999999


Q ss_pred             EEccCCCeeeeeeccceecCCCCc-ceeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhhCCCC-CCCCCccHH
Q 005257          500 LLDKEMNGRLGDFGLARMHGHGQV-ASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRP-IEEGKPNLV  577 (705)
Q Consensus       500 Lld~~~~~kL~DFGla~~~~~~~~-~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~P-f~~~~~~~~  577 (705)
                      |++.++.+||+|||+++....... .......||+.|+|||++.++.++.++|||||||++|||+|++.| +......  
T Consensus       177 l~~~~~~~ki~DfG~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwS~G~~l~ellt~g~p~~~~~~~~--  254 (311)
T d1t46a_         177 LLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVD--  254 (311)
T ss_dssp             EEETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSS--
T ss_pred             cccccCcccccccchheeccCCCcceEeeecccChHHcCHHHhcCCCCCCcccccchHHHHHHHHhCCCCCCCCCCHH--
Confidence            999999999999999987765433 233446889999999999999999999999999999999995444 5443321  


Q ss_pred             HHHHHHHHhCchhHHHHHhhhcCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHhccc
Q 005257          578 EMVWELMVQGKLLDALDARLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLEGKIE  641 (705)
Q Consensus       578 ~~v~~~~~~~~~~~~id~~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~  641 (705)
                      +.+...+..+         .+  ...+......+.+|+.+||+.||++||||.|+++.|++.+.
T Consensus       255 ~~~~~~i~~~---------~~--~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~~il~~L~~~i~  307 (311)
T d1t46a_         255 SKFYKMIKEG---------FR--MLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQIS  307 (311)
T ss_dssp             HHHHHHHHHT---------CC--CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             HHHHHHHhcC---------CC--CCCcccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhhc
Confidence            1222222222         22  22233345678999999999999999999999999987654

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

Probab=100.00  E-value=8.5e-46  Score=398.37  Aligned_cols=250  Identities=23%  Similarity=0.299  Sum_probs=202.8

Q ss_pred             CCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCC---chhHHHH---HHHHHHhccCCCCCcceeeeeeeeccCce
Q 005257          364 KGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHEN---DGGTRAF---LAEISSLGRLKHKSLVGLRGWCKREKGSL  437 (705)
Q Consensus       364 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~---~~~~~~~---~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~  437 (705)
                      ++|+..++||+|+||.||+|++..+|+.||||++....   ......+   .+|+.+++.++||||+++++++.. .+.+
T Consensus         4 ddy~i~~~lG~G~fg~Vy~~~~~~t~~~vAiK~i~~~~~~~~~~~~~~~~e~~~~~~l~~~~hpnIv~l~~~~~~-~~~~   82 (364)
T d1omwa3           4 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHT-PDKL   82 (364)
T ss_dssp             TTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEEC-SSEE
T ss_pred             HhCeeeeEEecCCCeEEEEEEECCCCCEEEEEEEchHHcchhhHHHHHHHHHHHHHHHhcCCCCcEEEEEEEEEE-CCEE
Confidence            57889999999999999999999999999999986431   1122233   345778888899999999998876 6789


Q ss_pred             EEEEeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeecccee
Q 005257          438 MLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARM  517 (705)
Q Consensus       438 ~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~  517 (705)
                      |+||||+++|+|.++|.+..   .+++.++..++.||+.||.|||+   ++||||||||+|||++.++.+||+|||+|+.
T Consensus        83 ~ivmE~~~gg~L~~~l~~~~---~~~e~~~~~~~~qi~~aL~ylH~---~~iiHrDlKP~NILl~~~g~iKl~DFGla~~  156 (364)
T d1omwa3          83 SFILDLMNGGDLHYHLSQHG---VFSEADMRFYAAEIILGLEHMHN---RFVVYRDLKPANILLDEHGHVRISDLGLACD  156 (364)
T ss_dssp             EEEECCCCSCBHHHHHHHHC---SCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECSSSCEEECCCTTCEE
T ss_pred             EEEEEecCCCcHHHHHHhcc---cccHHHHHHHHHHHHHHHHHHHH---CCccceeeccceeEEcCCCcEEEeeeceeee
Confidence            99999999999999997654   68999999999999999999999   9999999999999999999999999999997


Q ss_pred             cCCCCcceeeeeeccccCCCcccccc-CCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhHHHHHh
Q 005257          518 HGHGQVASTTRVVGTVGYLAPEVFSS-GRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDAR  596 (705)
Q Consensus       518 ~~~~~~~~~~~~~gt~~y~APE~~~~-~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~  596 (705)
                      .....   ....+||+.|||||++.. ..++.++|||||||++|||+||+.||..........+..            ..
T Consensus       157 ~~~~~---~~~~~GT~~y~APE~~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~~~------------~~  221 (364)
T d1omwa3         157 FSKKK---PHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDR------------MT  221 (364)
T ss_dssp             CSSSC---CCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCSSCSSCSSCHHHHHH------------HS
T ss_pred             cCCCc---ccccccccccchhHHhhcCCCCCcccchhHHHHHHHHHHhCCCCCCCCCHHHHHHHHH------------hc
Confidence            65443   233579999999999975 468999999999999999999999998654321111111            11


Q ss_pred             hhcCCCCCHHHHHHHHHHHHHcCCCCCCCCCC-----HHHHHHH
Q 005257          597 LRAKGGFDEDEVERVLHLGLLCAYPDPRARPT-----MRQVVKV  635 (705)
Q Consensus       597 l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs-----~~evl~~  635 (705)
                      ......++......+.+++..||+.||++|||     ++|++++
T Consensus       222 ~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~a~eil~H  265 (364)
T d1omwa3         222 LTMAVELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKES  265 (364)
T ss_dssp             SSCCCCCCSSSCHHHHHHHHHHTCSSTTTSTTTSSSTHHHHHTS
T ss_pred             ccCCCCCCCCCCHHHHHHHHHHcccCHHHhCCCcccCHHHHHcC
Confidence            11112223334466889999999999999999     6888763

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.7e-46  Score=393.66  Aligned_cols=261  Identities=22%  Similarity=0.410  Sum_probs=211.8

Q ss_pred             hCCCCcceEEeecCceEEEEEEEcC-----CCeEEEEEEeccCC-chhHHHHHHHHHHhccCCCCCcceeeeeeeeccCc
Q 005257          363 TKGFSEENVIGVGGNGKVYKGVLEG-----GGAEIAVKRISHEN-DGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGS  436 (705)
Q Consensus       363 t~~f~~~~~LG~G~fg~Vy~~~~~~-----~~~~vavK~i~~~~-~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~  436 (705)
                      .++|...+.||+|+||+||+|.++.     .+..||||+++... ......|.+|++++++++||||++++++|.. ++.
T Consensus        19 ~~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~VAvK~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~-~~~   97 (308)
T d1p4oa_          19 REKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQ-GQP   97 (308)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEECS-SSS
T ss_pred             HHHeEEeeEEeeCCCeEEEEEEECCcccCCCCcEEEEEEECcccChHHHHHHHHHHHHHHHcCCCCEeeeeeEEec-CCc
Confidence            3567788999999999999998852     35789999997543 3445578999999999999999999999876 668


Q ss_pred             eEEEEeeCCCCChhHHHHhc-------CCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeee
Q 005257          437 LMLVYDYMENGSLDKWIFQC-------DGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRL  509 (705)
Q Consensus       437 ~~lV~E~~~~gsL~~~L~~~-------~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL  509 (705)
                      .++||||+++|+|.+++...       .....+++..+.+++.|+|.||.|||+   ++|+||||||+|||+++++++||
T Consensus        98 ~~lv~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~gl~~LH~---~~ivHrDlk~~NiLld~~~~~Kl  174 (308)
T d1p4oa_          98 TLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNA---NKFVHRDLAARNCMVAEDFTVKI  174 (308)
T ss_dssp             CEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHH---TTCBCSCCSGGGEEECTTCCEEE
T ss_pred             eeEEEeecCCCCHHHHHHhcccccccccccCCCCHHHHHHHHHHHHHHHHHHhh---CCeeeceEcCCceeecCCceEEE
Confidence            89999999999999998643       122357999999999999999999998   99999999999999999999999


Q ss_pred             eeeccceecCCCCcc-eeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhhCC-CCCCCCCccHHHHHHHHHHhC
Q 005257          510 GDFGLARMHGHGQVA-STTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGR-RPIEEGKPNLVEMVWELMVQG  587 (705)
Q Consensus       510 ~DFGla~~~~~~~~~-~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~-~Pf~~~~~~~~~~v~~~~~~~  587 (705)
                      +|||+++........ ......||+.|+|||.+.++.++.++|||||||++|||+||+ .||.....   ..+...+.++
T Consensus       175 ~DFGla~~~~~~~~~~~~~~~~~t~~y~aPe~l~~~~~~~~~Dv~S~G~il~El~t~~~~p~~~~~~---~~~~~~i~~~  251 (308)
T d1p4oa_         175 GDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSN---EQVLRFVMEG  251 (308)
T ss_dssp             CCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCH---HHHHHHHHTT
T ss_pred             eecccceeccCCcceeeccceecccccCCHHHHccCCCCcccccccHHHHHHHHHhCCCCCCCCCCH---HHHHHHHHhC
Confidence            999999866443322 223347899999999999999999999999999999999985 56654332   1222233333


Q ss_pred             chhHHHHHhhhcCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHhccc
Q 005257          588 KLLDALDARLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLEGKIE  641 (705)
Q Consensus       588 ~~~~~id~~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~  641 (705)
                      ..           ...+......+.+++..||+.||++||||.+|++.|++.++
T Consensus       252 ~~-----------~~~p~~~~~~l~~li~~cl~~~P~~RPs~~~il~~L~~~~~  294 (308)
T d1p4oa_         252 GL-----------LDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEME  294 (308)
T ss_dssp             CC-----------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGSC
T ss_pred             CC-----------CCCcccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhcC
Confidence            22           12233344679999999999999999999999999987655

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.3e-46  Score=395.91  Aligned_cols=248  Identities=23%  Similarity=0.389  Sum_probs=207.2

Q ss_pred             CCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccC---CchhHHHHHHHHHHhc-cCCCCCcceeeeeeeeccCceEE
Q 005257          364 KGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHE---NDGGTRAFLAEISSLG-RLKHKSLVGLRGWCKREKGSLML  439 (705)
Q Consensus       364 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~---~~~~~~~~~~Ei~~l~-~l~Hpniv~l~g~~~~~~~~~~l  439 (705)
                      ++|...+.||+|+||+||+|+++.+++.||||+++..   .....+.+..|..++. .++||||+++++++.+ ++.+|+
T Consensus         2 ddy~i~~~iG~G~fg~Vy~~~~~~t~~~vAvK~i~k~~~~~~~~~~~~~~e~~~l~~~~~hp~Iv~~~~~~~~-~~~~yi   80 (320)
T d1xjda_           2 EDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQT-KENLFF   80 (320)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEEC-SSEEEE
T ss_pred             CCeEEeeEEecCCCcEEEEEEECCCCCEEEEEEEchhhccChHHHHHHHHHHHHHHHhCCCCcEEEEEEEEcc-CCceeE
Confidence            4688899999999999999999999999999999653   2344566777877765 6899999999999876 778999


Q ss_pred             EEeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecC
Q 005257          440 VYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHG  519 (705)
Q Consensus       440 V~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~  519 (705)
                      ||||+++|+|.+++....   .+++.++..++.||+.||+|||+   ++|+||||||+|||+++++++||+|||+++...
T Consensus        81 vmEy~~~g~L~~~i~~~~---~~~e~~~~~~~~qi~~al~ylH~---~~iiHrDikp~NiL~~~~~~~kl~DFG~a~~~~  154 (320)
T d1xjda_          81 VMEYLNGGDLMYHIQSCH---KFDLSRATFYAAEIILGLQFLHS---KGIVYRDLKLDNILLDKDGHIKIADFGMCKENM  154 (320)
T ss_dssp             EEECCTTCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTSCEEECCCTTCBCCC
T ss_pred             EEeecCCCcHHHHhhccC---CCCHHHHHHHHHHHHHHHHHHHh---CCeeeccCcccceeecCCCceeccccchhhhcc
Confidence            999999999999997654   58999999999999999999999   999999999999999999999999999998665


Q ss_pred             CCCcceeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhHHHHHhhhc
Q 005257          520 HGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRA  599 (705)
Q Consensus       520 ~~~~~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~l~~  599 (705)
                      .... ..+...||+.|+|||++.+..++.++|||||||++|||++|+.||.+...   ..++..+..+.           
T Consensus       155 ~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyemltG~~PF~~~~~---~~~~~~i~~~~-----------  219 (320)
T d1xjda_         155 LGDA-KTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDE---EELFHSIRMDN-----------  219 (320)
T ss_dssp             CTTC-CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH---HHHHHHHHHCC-----------
T ss_pred             cccc-cccccCCCCCcCCHHHHcCCCCCchhhhhhhhHHHHHHHhCCCCCCCCCH---HHHHHHHHcCC-----------
Confidence            4332 23446899999999999999999999999999999999999999986543   22223332221           


Q ss_pred             CCCCCHHHHHHHHHHHHHcCCCCCCCCCCHH-HHHH
Q 005257          600 KGGFDEDEVERVLHLGLLCAYPDPRARPTMR-QVVK  634 (705)
Q Consensus       600 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~-evl~  634 (705)
                       ..++......+.+++..||+.||++||++. ++++
T Consensus       220 -~~~p~~~s~~~~dli~~~L~~dP~~R~s~~~~l~~  254 (320)
T d1xjda_         220 -PFYPRWLEKEAKDLLVKLFVREPEKRLGVRGDIRQ  254 (320)
T ss_dssp             -CCCCTTSCHHHHHHHHHHSCSSGGGSBTTBSCGGG
T ss_pred             -CCCCccCCHHHHHHHHHhcccCCCCCcCHHHHHHh
Confidence             223333446688999999999999999985 6654

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3e-46  Score=391.76  Aligned_cols=261  Identities=26%  Similarity=0.418  Sum_probs=209.9

Q ss_pred             hCCCCcceEEeecCceEEEEEEEcCCC-------eEEEEEEeccCCc-hhHHHHHHHHHHhccC-CCCCcceeeeeeeec
Q 005257          363 TKGFSEENVIGVGGNGKVYKGVLEGGG-------AEIAVKRISHEND-GGTRAFLAEISSLGRL-KHKSLVGLRGWCKRE  433 (705)
Q Consensus       363 t~~f~~~~~LG~G~fg~Vy~~~~~~~~-------~~vavK~i~~~~~-~~~~~~~~Ei~~l~~l-~Hpniv~l~g~~~~~  433 (705)
                      .++|...+.||+|+||.||+|+...++       ..||||+++.... ....++.+|...+.++ +||||++++++|.+ 
T Consensus        12 ~~~~~l~~~iG~G~fg~Vy~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~e~~~l~~~~~HpnIv~~~~~~~~-   90 (299)
T d1fgka_          12 RDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQ-   90 (299)
T ss_dssp             GGGEEEEEECC-----CEEEEEEECC----CCCEEEEEEECCCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS-
T ss_pred             HHHeEEeeEEeecCCcEEEEEEEcCCCcccccCceEEEEEEECcccChHHHHHHHHHHHHHHHhcCCCeEEeccccccc-
Confidence            356778899999999999999976543       4799999976643 4467899999999888 89999999999986 


Q ss_pred             cCceEEEEeeCCCCChhHHHHhcCC-------------CCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeE
Q 005257          434 KGSLMLVYDYMENGSLDKWIFQCDG-------------SMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVL  500 (705)
Q Consensus       434 ~~~~~lV~E~~~~gsL~~~L~~~~~-------------~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NIL  500 (705)
                      ++..++||||+++|+|.++|.....             ...+++.++++++.||+.||+|||+   ++||||||||+|||
T Consensus        91 ~~~~~~v~e~~~~g~l~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~ylH~---~~ivHrDiKp~NiL  167 (299)
T d1fgka_          91 DGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLAS---KKCIHRDLAARNVL  167 (299)
T ss_dssp             SSSCEEEECCCTTCBHHHHHHTTSCC------------CCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEE
T ss_pred             CCeEEEEEEccCCCcHHHHHHhhcCCccccccccccCccccCCHHHHHHHHHHHHHHHHHhhh---CCEEeeeeccccee
Confidence            6789999999999999999975431             2368999999999999999999999   99999999999999


Q ss_pred             EccCCCeeeeeeccceecCCCCcc-eeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhh-CCCCCCCCCccHHH
Q 005257          501 LDKEMNGRLGDFGLARMHGHGQVA-STTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLS-GRRPIEEGKPNLVE  578 (705)
Q Consensus       501 ld~~~~~kL~DFGla~~~~~~~~~-~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~Ellt-G~~Pf~~~~~~~~~  578 (705)
                      ++.++.+||+|||+++........ ......||+.|+|||.+.++.++.++|||||||++|||++ |+.||.....   +
T Consensus       168 l~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~l~~~~y~~k~DiwS~Gvvl~ell~~g~~p~~~~~~---~  244 (299)
T d1fgka_         168 VTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPV---E  244 (299)
T ss_dssp             ECTTCCEEECSTTCCCCGGGCCTTCCCTTSCCGGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCH---H
T ss_pred             ecCCCCeEeccchhhccccccccccccccCCCChhhhhhhHhcCCCCCchhhhHHhHHHHHHhccCCCCCCCCCCH---H
Confidence            999999999999999876544322 2334578999999999999999999999999999999998 6888865443   2


Q ss_pred             HHHHHHHhCchhHHHHHhhhcCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHhccc
Q 005257          579 MVWELMVQGKLLDALDARLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLEGKIE  641 (705)
Q Consensus       579 ~v~~~~~~~~~~~~id~~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~  641 (705)
                      .++..+..+..           ...+......+.+++.+||+.||++|||+.||++.|++++.
T Consensus       245 ~~~~~i~~~~~-----------~~~p~~~~~~l~~li~~cl~~dP~~Rps~~eil~~L~~i~a  296 (299)
T d1fgka_         245 ELFKLLKEGHR-----------MDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVA  296 (299)
T ss_dssp             HHHHHHHTTCC-----------CCCCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             HHHHHHHcCCC-----------CCCCccchHHHHHHHHHHccCCHhHCcCHHHHHHHHHHHhh
Confidence            33333333321           22233345678999999999999999999999999987654

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2e-45  Score=388.97  Aligned_cols=255  Identities=21%  Similarity=0.293  Sum_probs=210.9

Q ss_pred             hCCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCCchhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEEEEe
Q 005257          363 TKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYD  442 (705)
Q Consensus       363 t~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~lV~E  442 (705)
                      .++|...+.||+|+||+||+|.+..+++.||||+++... .....+.+|+++|+.++||||+++++++.+ ++.+|+|||
T Consensus         4 ~~rY~i~~~lG~G~fg~Vy~~~~~~~~~~~AiK~i~~~~-~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~-~~~~~lvmE   81 (321)
T d1tkia_           4 YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKG-TDQVLVKKEISILNIARHRNILHLHESFES-MEELVMIFE   81 (321)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCT-HHHHHHHHHHHHHHHSCCTTBCCEEEEEEE-TTEEEEEEC
T ss_pred             ccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEcCCc-ccHHHHHHHHHHHHhCCCCCCCeEEEEEEE-CCEEEEEEe
Confidence            467889999999999999999999999999999997653 334568899999999999999999998876 678999999


Q ss_pred             eCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccC--CCeeeeeeccceecCC
Q 005257          443 YMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKE--MNGRLGDFGLARMHGH  520 (705)
Q Consensus       443 ~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~--~~~kL~DFGla~~~~~  520 (705)
                      ||++|+|.+++...+  ..+++.++..++.||+.||.|||+   ++|+||||||+|||++.+  ..+||+|||+++....
T Consensus        82 ~~~gg~L~~~i~~~~--~~l~e~~~~~i~~qi~~al~yLH~---~~iiHrDlKp~NIll~~~~~~~ikl~DFG~~~~~~~  156 (321)
T d1tkia_          82 FISGLDIFERINTSA--FELNEREIVSYVHQVCEALQFLHS---HNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKP  156 (321)
T ss_dssp             CCCCCBHHHHHTSSS--CCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEESSSSCCCEEECCCTTCEECCT
T ss_pred             cCCCCcHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHH---cCCCcccccccceeecCCCceEEEEcccchhhcccc
Confidence            999999999996543  258999999999999999999998   999999999999999854  5799999999987754


Q ss_pred             CCcceeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhHHHHHhhhcC
Q 005257          521 GQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRAK  600 (705)
Q Consensus       521 ~~~~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~l~~~  600 (705)
                      ...  .....||+.|+|||.+.+..++.++||||+||++|||++|+.||......   .+...+..+.            
T Consensus       157 ~~~--~~~~~~t~~y~ape~~~~~~~~~~~DiWSlGvily~ll~G~~Pf~~~~~~---~~~~~i~~~~------------  219 (321)
T d1tkia_         157 GDN--FRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQ---QIIENIMNAE------------  219 (321)
T ss_dssp             TCE--EEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHH---HHHHHHHHTC------------
T ss_pred             CCc--ccccccccccccchhccCCCCCchhhcccHHHHHHHHHhCCCCCCCCCHH---HHHHHHHhCC------------
Confidence            432  33468899999999999999999999999999999999999999875431   2222222221            


Q ss_pred             CCCCHH----HHHHHHHHHHHcCCCCCCCCCCHHHHHH--HHHhccc
Q 005257          601 GGFDED----EVERVLHLGLLCAYPDPRARPTMRQVVK--VLEGKIE  641 (705)
Q Consensus       601 ~~~~~~----~~~~l~~l~~~Cl~~dP~~RPs~~evl~--~L~~~~~  641 (705)
                      ..++..    ....+.+++..||..||++|||+.|+++  ++.+..+
T Consensus       220 ~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~eil~hp~~~~~~~  266 (321)
T d1tkia_         220 YTFDEEAFKEISIEAMDFVDRLLVKERKSRMTASEALQHPWLKQKIE  266 (321)
T ss_dssp             CCCCHHHHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSHHHHSCGG
T ss_pred             CCCChhhccCCCHHHHHHHHHHccCChhHCcCHHHHhcCHhhccCcc
Confidence            111211    1345789999999999999999999998  3554433

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.1e-45  Score=387.90  Aligned_cols=266  Identities=26%  Similarity=0.365  Sum_probs=200.4

Q ss_pred             CCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCCchhHHHHHHHHHHhccCCCCCcceeeeeeeeccC---ceEEE
Q 005257          364 KGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKG---SLMLV  440 (705)
Q Consensus       364 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~---~~~lV  440 (705)
                      +.|...+.||+|+||+||+|++.  |+.||||+++... .....+..|+..+..++||||++++++|..+..   .+++|
T Consensus         3 ~~~~l~~~iG~G~fg~Vy~~~~~--g~~vAvK~~~~~~-~~~~~~e~ei~~~~~~~HpnIv~~~~~~~~~~~~~~~~~lv   79 (303)
T d1vjya_           3 RTIVLQESIGKGRFGEVWRGKWR--GEEVAVKIFSSRE-ERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLV   79 (303)
T ss_dssp             GGEEEEEEEECCSSSEEEEEEET--TEEEEEEEECGGG-HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEE
T ss_pred             cEEEEEEEEeeCCCeEEEEEEEC--CEEEEEEEECccc-hhHHHHHHHHHHHhhCCCCcCcceEEEEEeCCCcceEEEEE
Confidence            34667889999999999999974  7899999986432 122223456666778899999999999986443   57999


Q ss_pred             EeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCC-----CCCeeecCCCCCCeEEccCCCeeeeeeccc
Q 005257          441 YDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGW-----EKKVLHRDIKSSNVLLDKEMNGRLGDFGLA  515 (705)
Q Consensus       441 ~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~-----~~~iiHrDLkp~NILld~~~~~kL~DFGla  515 (705)
                      ||||++|+|.++|++.    .++|.++++++.|+|.||+|||+..     .++|+||||||+||||+.++.+||+|||++
T Consensus        80 ~Ey~~~g~L~~~l~~~----~l~~~~~~~~~~~ia~gl~~lH~~~~~~~~~~~IvHrDlKp~NILl~~~~~~Kl~DFGl~  155 (303)
T d1vjya_          80 SDYHEHGSLFDYLNRY----TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA  155 (303)
T ss_dssp             EECCTTCBHHHHHHHC----CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCCGGGEEECTTSCEEECCCTTC
T ss_pred             EecccCCCHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCeeccccCccceEEcCCCCeEEEecCcc
Confidence            9999999999999753    5899999999999999999999631     379999999999999999999999999999


Q ss_pred             eecCCCCcc---eeeeeeccccCCCccccccCC------CCccccEEEEehhHHHHhhCCCCCCCCCc------------
Q 005257          516 RMHGHGQVA---STTRVVGTVGYLAPEVFSSGR------ASTQTDVFGFGILILEVLSGRRPIEEGKP------------  574 (705)
Q Consensus       516 ~~~~~~~~~---~~~~~~gt~~y~APE~~~~~~------~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~------------  574 (705)
                      +........   ......||+.|||||++.+..      ++.++|||||||+||||+||..|+.....            
T Consensus       156 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~k~Di~S~Gvvl~el~tg~~~~~~~~~~~~~~~~~~~~~  235 (303)
T d1vjya_         156 VRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSD  235 (303)
T ss_dssp             EEEETTTTEECC----CCSCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSS
T ss_pred             ccccCCCcceeccccceecccCcCChhhccccccccCCCcCcchhhhhhHHHHHHHhhCCCCCCcccccccchhhccccc
Confidence            877544322   223468999999999987542      57789999999999999999887743111            


Q ss_pred             cHHHHHHHHHHhCchhHHHHHhhhcCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHhccc
Q 005257          575 NLVEMVWELMVQGKLLDALDARLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLEGKIE  641 (705)
Q Consensus       575 ~~~~~v~~~~~~~~~~~~id~~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~  641 (705)
                      ...+........+...    +.+.. ...+.+....+.+++.+||+.||++|||+.||++.|+.+.+
T Consensus       236 ~~~~~~~~~~~~~~~~----p~~~~-~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ei~~~L~~i~~  297 (303)
T d1vjya_         236 PSVEEMRKVVCEQKLR----PNIPN-RWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQ  297 (303)
T ss_dssp             CCHHHHHHHHTTSCCC----CCCCG-GGGGCHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             chHHHHHHHHhccccC----CCCCc-ccCChHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHHH
Confidence            1112222222221110    00000 00123456678999999999999999999999999986543

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.7e-45  Score=391.76  Aligned_cols=249  Identities=21%  Similarity=0.300  Sum_probs=199.9

Q ss_pred             CCCCcce-EEeecCceEEEEEEEcCCCeEEEEEEeccCCchhHHHHHHHHHHhccC-CCCCcceeeeeeee---ccCceE
Q 005257          364 KGFSEEN-VIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRL-KHKSLVGLRGWCKR---EKGSLM  438 (705)
Q Consensus       364 ~~f~~~~-~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~~~~~~~~~Ei~~l~~l-~Hpniv~l~g~~~~---~~~~~~  438 (705)
                      ++|.+.+ .||+|+||+||+|.+..+++.||||+++.     .+.+.+|++++.++ +||||+++++++..   .+..+|
T Consensus        11 ~~y~i~~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~-----~~~~~~E~~~~~~~~~hpnIv~l~~~~~~~~~~~~~~~   85 (335)
T d2ozaa1          11 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD-----CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLL   85 (335)
T ss_dssp             GTEEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEC-----SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEE
T ss_pred             cCEEEeeEEeeeccCeEEEEEEECCCCCEEEEEEECC-----cHHHHHHHHHHHHhcCCCCCCeEEEEEeecccCCCEEE
Confidence            5677664 69999999999999999999999999863     25577899987655 89999999998753   245689


Q ss_pred             EEEeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEcc---CCCeeeeeeccc
Q 005257          439 LVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDK---EMNGRLGDFGLA  515 (705)
Q Consensus       439 lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~---~~~~kL~DFGla  515 (705)
                      +|||||++|+|.++|.+... ..+++.++..++.||+.||+|||+   ++|+||||||+|||++.   ++.+||+|||+|
T Consensus        86 ivmEy~~gg~L~~~i~~~~~-~~l~e~~~~~i~~qi~~al~ylH~---~~iiHRDiKp~NIll~~~~~~~~~Kl~DFG~a  161 (335)
T d2ozaa1          86 IVMECLDGGELFSRIQDRGD-QAFTEREASEIMKSIGEAIQYLHS---INIAHRDVKPENLLYTSKRPNAILKLTDFGFA  161 (335)
T ss_dssp             EEEECCCSEEHHHHHHSCSC-CCEEHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEESCSSTTCCEEECCCTTC
T ss_pred             EEEECCCCCcHHHHHHhcCC-CCcCHHHHHHHHHHHHHHHHHHHH---cCCcccccccccccccccccccccccccccee
Confidence            99999999999999976433 369999999999999999999998   99999999999999985   457999999999


Q ss_pred             eecCCCCcceeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhhCCCCCCCCCccH-HHHHHHHHHhCchhHHHH
Q 005257          516 RMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNL-VEMVWELMVQGKLLDALD  594 (705)
Q Consensus       516 ~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~-~~~v~~~~~~~~~~~~id  594 (705)
                      +.......  ....+||+.|||||++.+..++.++|||||||++|||+||+.||.+..... ..........+.      
T Consensus       162 ~~~~~~~~--~~~~~gt~~y~aPE~~~~~~y~~~~DiwSlGvily~lltg~~Pf~~~~~~~~~~~~~~~i~~~~------  233 (335)
T d2ozaa1         162 KETTSHNS--LTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQ------  233 (335)
T ss_dssp             EECCCCCC--CCCCSCCCSSCCCCCCCGGGGSHHHHHHHHHHHHHHHTTSSCSCEETTCC--------CCCSCS------
T ss_pred             eeccCCCc--cccccCCcccCCcHHHcCCCCCHHHHHHhhchhHHHHhhCCCCCCCCCHHHHHHHHHHHHhcCC------
Confidence            87655433  234589999999999999899999999999999999999999997543211 111111111111      


Q ss_pred             HhhhcCCCCC----HHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 005257          595 ARLRAKGGFD----EDEVERVLHLGLLCAYPDPRARPTMRQVVKV  635 (705)
Q Consensus       595 ~~l~~~~~~~----~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  635 (705)
                            ..++    ....+.+.+++..||+.||++|||+.|++++
T Consensus       234 ------~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~h  272 (335)
T d2ozaa1         234 ------YEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNH  272 (335)
T ss_dssp             ------SSCCTTHHHHSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred             ------CCCCCcccccCCHHHHHHHHHHccCChhHCcCHHHHHcC
Confidence                  1111    1234678899999999999999999999884

>d1ioaa_ b.29.1.1 (A:) Phytohemagglutinin-L, PHA-L, also arcelin {Kidney bean (Phaseolus vulgaris), G02771, arcelin-5a [TaxId: 3885]}

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Phytohemagglutinin-L, PHA-L, also arcelin
species: Kidney bean (Phaseolus vulgaris), G02771, arcelin-5a [TaxId: 3885]

Probab=100.00  E-value=3.4e-45  Score=367.67  Aligned_cols=212  Identities=29%  Similarity=0.496  Sum_probs=181.3

Q ss_pred             ceeeEEeCCCCC-CCeEEEcceEee-cCcEEecCCCC------CeEEEEEcCCCccccCCCCCcccceEEEEEEEEecCC
Q 005257           24 SAVDFVFNGFNS-SNLSLYGTATVE-SRILTLTNSTT------FTIGRALYPSKIPTKRPNSSYVYPFSTSFIFAMAPYK   95 (705)
Q Consensus        24 ~~~~f~f~~f~~-~~~~~~g~a~~~-~~~l~lt~~~~------~~~Gr~~y~~pv~l~~~~~~~~~sF~t~F~f~i~~~~   95 (705)
                      ..++|+|++|+. .+|+|+|||.+. +|.||||++..      .++|||+|++||+||+  +++++||+|+|+|.|.+.+
T Consensus         2 ~~~sF~f~~F~~~~~l~l~GdA~i~~~g~l~LT~~~~~~~~~~~s~G~a~y~~Pv~l~~--~~~~~sFst~F~f~i~~~~   79 (228)
T d1ioaa_           2 TETSFNFPNFHTDDKLILQGNATISSKGQLQLTGVGSNELPRVDSLGRAFYSDPIQIKD--SNNVASFNTNFTFIIRAKN   79 (228)
T ss_dssp             CCCEEEESSCCTTSSEEEEETCEECTTSCEETTCBCTTSSBCSSCBEEEEESSCEECBC--SSCBEEEEEEEEEECCBSC
T ss_pred             ccceEEcCCCCCCCcEEEeeeeEEcCCCEEEecCCCCCCccccceeEEEEECCceEecC--CCceeeEEEEEEEEEecCC
Confidence            467999999976 569999999986 67999998764      5789999999999998  4779999999999999988


Q ss_pred             CCCCCCceEEEEeeCCCCCCCCCCCcccccccCCCCCCCCcEEEEEeecccCCCCCCCCCCeeEEecCCCcccccccccc
Q 005257           96 GVLAGHGLVFLFVPFHGIKGATEAQHLGLFNRTNDGNSSNHVFGVEFDVFKNQEFNDIDENHVGIDVNSLTSVSAHAAGY  175 (705)
Q Consensus        96 ~~~~g~G~aF~~~~~~~~~~~~~g~~lGl~~~~~~~~~~~~~vaVEFDt~~n~~~~d~~~~Hvgidvns~~S~~~~~~~~  175 (705)
                      ...+||||||+|+|+.. +.+..|++||+++.+. ++..++.|||||||+.|.  +|++.+|+++++++..         
T Consensus        80 ~~~~gDGlAF~l~~~~~-~~~~~g~~lgl~~~~~-~~~~~~~vave~dt~~n~--~~~~~~~~~~~~~~~~---------  146 (228)
T d1ioaa_          80 QSISAYGLAFALVPVNS-PPQKKQEFLGIFNTNN-PEPNARTVAVVFNTFKNR--IDFDKNFIKPYVNENC---------  146 (228)
T ss_dssp             TTSCCEEEEEEEEETTC-CCCCCGGGTTTCCCSS-CCGGGCCEEEEEETTTTE--EEEEESSSSCSEEEEC---------
T ss_pred             CCCCCCEEEEEEeCCCC-CCCCCccccccccccC-CCCcceeEEEEecCcccc--ccCCCCccceeccccc---------
Confidence            78899999999999865 4456889999998654 456789999999999985  5788888888776432         


Q ss_pred             cCCCCCCCCCCCCCCCCCCCccccceeecCCCcceEEEEEe--cCceEEEEEEEccCCCCCCCceeeeecCcccccccee
Q 005257          176 WPDNQTDSSGSNSNSGTGDDEKSFKELKLNNGKNYQVWIDY--ADSFINITMVEAGMKRPKRPLLSVPLNLSGVLEDEMY  253 (705)
Q Consensus       176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~I~Y--~~~~~~v~~~~~~~~~~~~~~ls~~vdl~~~l~~~~~  253 (705)
                                               ...+.+|+.++|||+|  ..+.++|++...  .+|..|.++..|||+.+||++||
T Consensus       147 -------------------------~~~~~~g~~~~v~I~Yd~~~~~l~V~l~~~--~~~~~~~ls~~vdL~~~l~~~vy  199 (228)
T d1ioaa_         147 -------------------------DFHKYNGEKTDVQITYDSSNNDLRVFLHFT--VSQVKCSVSATVHLEKEVDEWVS  199 (228)
T ss_dssp             -------------------------CHHHHCSSCEEEEEEEETTTTEEEEEEEET--TTCCEEEEEEECCGGGTSCSEEE
T ss_pred             -------------------------ccccccCcEEEEEEEEcCCCCEEEEEEEeC--CCCceeeEEEEEchHHcCCCcEE
Confidence                                     2356789999999999  567888888754  47888999999999999999999


Q ss_pred             cccccccc---cccccceeeeeeeccc
Q 005257          254 VGFTAATG---QLVESHKILAWSFSNT  277 (705)
Q Consensus       254 vGfsastg---~~~~~h~i~~wsf~~~  277 (705)
                      ||||||||   ...|.|+|++|+|+++
T Consensus       200 vGFSAsTG~~~~~~~~h~I~sWsFss~  226 (228)
T d1ioaa_         200 VGFSPTSGLTEDTTETHDVLSWSFSSK  226 (228)
T ss_dssp             EEEEEEECSSTTTCBCCEEEEEEEEEE
T ss_pred             EEEEeecCCCCCCceEEEEEEEEeEEe
Confidence            99999999   5668999999999975

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.1e-45  Score=384.02  Aligned_cols=259  Identities=26%  Similarity=0.308  Sum_probs=195.2

Q ss_pred             ceEEeecCceEEEEEEEcCCCeEEEEEEeccCCch-----hHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEEEEee
Q 005257          369 ENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDG-----GTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDY  443 (705)
Q Consensus       369 ~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~~-----~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~lV~E~  443 (705)
                      .++||+|+||+||+|.++.+|+.||||+++.....     ..+.+.+|++++++++||||+++++++.. ++.+++||||
T Consensus         3 l~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~~~~~~~~-~~~~~ivmE~   81 (299)
T d1ua2a_           3 LDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGH-KSNISLVFDF   81 (299)
T ss_dssp             EEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECC-TTCCEEEEEC
T ss_pred             ceEeccCcCeEEEEEEECCCCcEEEEEEEehhhhhhhhHHHHHHHHHHHHHHHhCCCCCEeEEEeeecc-CCceeehhhh
Confidence            57899999999999999999999999998654322     23468899999999999999999999886 6789999999


Q ss_pred             CCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecCCCCc
Q 005257          444 MENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHGQV  523 (705)
Q Consensus       444 ~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~~~~~  523 (705)
                      +.++++..++..   ...+++.++..++.||+.||+|||+   ++|+||||||+|||++.++.+||+|||+|+.......
T Consensus        82 ~~~~~~~~~~~~---~~~l~~~~~~~~~~qil~aL~~lH~---~~iiHrDiKp~NIli~~~~~~KL~DFG~a~~~~~~~~  155 (299)
T d1ua2a_          82 METDLEVIIKDN---SLVLTPSHIKAYMLMTLQGLEYLHQ---HWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNR  155 (299)
T ss_dssp             CSEEHHHHHTTC---CSSCCSSHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTCCEEECCCGGGSTTTSCCC
T ss_pred             hcchHHhhhhhc---ccCCCHHHHHHHHHHHHHHHHHhhc---cceecccCCcceEEecCCCccccccCccccccCCCcc
Confidence            998777665532   2368999999999999999999999   9999999999999999999999999999987654432


Q ss_pred             ceeeeeeccccCCCccccccC-CCCccccEEEEehhHHHHhhCCCCCCCCCcc-HHHHHHHHHHhCchh---HHHH----
Q 005257          524 ASTTRVVGTVGYLAPEVFSSG-RASTQTDVFGFGILILEVLSGRRPIEEGKPN-LVEMVWELMVQGKLL---DALD----  594 (705)
Q Consensus       524 ~~~~~~~gt~~y~APE~~~~~-~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~-~~~~v~~~~~~~~~~---~~id----  594 (705)
                      . ....+||+.|||||++... .++.++|||||||++|||++|+.||...... ....+.+........   +...    
T Consensus       156 ~-~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~  234 (299)
T d1ua2a_         156 A-YTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDY  234 (299)
T ss_dssp             C-CCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSSSTTSSTTC
T ss_pred             c-ccceecChhhccHHHHccCCCCChhhhhhhcchHHHHHHhCcCCCCCCCHHHHHHHHHHhcCCCChhhccchhccchh
Confidence            2 2335799999999998654 5799999999999999999999999765431 111111111000000   0000    


Q ss_pred             HhhhcCCCCCH-----HHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 005257          595 ARLRAKGGFDE-----DEVERVLHLGLLCAYPDPRARPTMRQVVKV  635 (705)
Q Consensus       595 ~~l~~~~~~~~-----~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  635 (705)
                      .........+.     ...+.+.+++.+||+.||++|||++|++++
T Consensus       235 ~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~dP~~R~sa~e~L~H  280 (299)
T d1ua2a_         235 VTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKM  280 (299)
T ss_dssp             CCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred             hhhccCCCCChHHhcccCCHHHHHHHHHHccCChhhCcCHHHHhCC
Confidence            00000000111     123568899999999999999999999873

>d1avba_ b.29.1.1 (A:) Phytohemagglutinin-L, PHA-L, also arcelin {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]}

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Phytohemagglutinin-L, PHA-L, also arcelin
species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]

Probab=100.00  E-value=2.2e-45  Score=368.62  Aligned_cols=215  Identities=30%  Similarity=0.451  Sum_probs=187.5

Q ss_pred             ceeeEEeCCCCCCCeEEEcceEee-cCcEEecCC---CCCeEEEEEcCCCccccCCCCCcccceEEEEEEEEecCCCCCC
Q 005257           24 SAVDFVFNGFNSSNLSLYGTATVE-SRILTLTNS---TTFTIGRALYPSKIPTKRPNSSYVYPFSTSFIFAMAPYKGVLA   99 (705)
Q Consensus        24 ~~~~f~f~~f~~~~~~~~g~a~~~-~~~l~lt~~---~~~~~Gr~~y~~pv~l~~~~~~~~~sF~t~F~f~i~~~~~~~~   99 (705)
                      .+++|+|++|++.||+|+|||++. +|.||||+.   ...++|||+|++||+||++.+++++||+|+|+|.|.+.+...+
T Consensus         2 ~~~sf~f~~F~~~nl~l~GdA~v~~~g~i~LT~~~~~~~~~~G~~~y~~Pv~l~~~~~~~~~sF~t~f~f~i~~~~~~~~   81 (226)
T d1avba_           2 NDASFNVETFNKTNLILQGDATVSSEGHLLLTNVKGNEEDSMGRAFYSAPIQINDRTIDNLASFSTNFTFRINAKNIENS   81 (226)
T ss_dssp             EEEEEEESSCCGGGEEEEETCEECTTSCEECSCSSSCCTTCEEEEEESSCEECEEGGGTEEEEEEEEEEEEEEESSTTSC
T ss_pred             CceEEECCCCCccceeEecceEECCCCeEEccCCCCCCccceEEEEeCCCeEcccCCCCcccceEEEEEEEEecCCCCCC
Confidence            478999999999999999999987 579999974   4578999999999999999999999999999999999888889


Q ss_pred             CCceEEEEeeCCCCCCCCCCCcccccccCCCCCCCCcEEEEEeecccCCCCCCCCCCeeEEecCCCcccccccccccCCC
Q 005257          100 GHGLVFLFVPFHGIKGATEAQHLGLFNRTNDGNSSNHVFGVEFDVFKNQEFNDIDENHVGIDVNSLTSVSAHAAGYWPDN  179 (705)
Q Consensus       100 g~G~aF~~~~~~~~~~~~~g~~lGl~~~~~~~~~~~~~vaVEFDt~~n~~~~d~~~~Hvgidvns~~S~~~~~~~~~~~~  179 (705)
                      ||||||+|+|....+ +..|+++|+++.          ++|||||+.|...+|+..||||||+|+..|..+.+.      
T Consensus        82 gDG~aF~i~~~~~~~-g~~gg~~gl~~~----------~~v~fdt~~~~~~~d~~~nhi~i~~n~~~s~~~~~~------  144 (226)
T d1avba_          82 AYGLAFALVPVGSRP-KLKGRYLGLFNT----------TNYDRDAHTVAVVFDTVSNRIEIDVNSIRPIATESC------  144 (226)
T ss_dssp             CEEEEEEEEETTCCC-CCCGGGTTTCSC----------SSCCGGGCCEEEEEETTTTEEEEEESSSSCSEEEEC------
T ss_pred             CceEEEEEccCCCCC-CCccccCCcccc----------ccccccceeccccccCCCCEEEEeCCCCcccccccc------
Confidence            999999999987644 467889999763          479999999977679999999999999988776543      


Q ss_pred             CCCCCCCCCCCCCCCCccccceeecCCCcceEEEEEe--cCceEEEEEEEccCCCCCCCceeeeecCccccccceecccc
Q 005257          180 QTDSSGSNSNSGTGDDEKSFKELKLNNGKNYQVWIDY--ADSFINITMVEAGMKRPKRPLLSVPLNLSGVLEDEMYVGFT  257 (705)
Q Consensus       180 ~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~I~Y--~~~~~~v~~~~~~~~~~~~~~ls~~vdl~~~l~~~~~vGfs  257 (705)
                                           ...+.+|+.++|||+|  ..++|+|++...  .+|..+.++..|||+.+||++||||||
T Consensus       145 ---------------------~~~~~~g~~~~v~I~Yd~~~~~L~V~l~~~--~~~~~~~~~~~vdL~~~l~~~~y~GFS  201 (226)
T d1avba_         145 ---------------------NFGHNNGEKAEVRITYDSPKNDLRVSLLYP--SSEEKCHVSATVPLEKEVEDWVSVGFS  201 (226)
T ss_dssp             ---------------------CSGGGTTCEEEEEEEEEGGGTEEEEEEEET--TTTEEEEEEEECCHHHHSCSEEEEEEE
T ss_pred             ---------------------ccccCCCeEEEEEEEEcCCCcEEEEEEEeC--CCCccEEEEEEecHHHccCCcEEEEEE
Confidence                                 2357799999999999  456788887654  467788899999999999999999999


Q ss_pred             ccccc---ccccceeeeeeecccc
Q 005257          258 AATGQ---LVESHKILAWSFSNTK  278 (705)
Q Consensus       258 astg~---~~~~h~i~~wsf~~~~  278 (705)
                      ||||.   ..|.|+|++|+|+++.
T Consensus       202 AaTG~~s~~~~~H~IlsWsF~s~~  225 (226)
T d1avba_         202 ATSGSKKETTETHNVLSWSFSSNF  225 (226)
T ss_dssp             EEECSSGGGCEEEEEEEEEEEEEE
T ss_pred             EEcCCCCCCeeeeEEEEEEeEEec
Confidence            99995   5678999999999763

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.6e-44  Score=378.44  Aligned_cols=263  Identities=25%  Similarity=0.336  Sum_probs=201.5

Q ss_pred             CCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCC--chhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEEEE
Q 005257          364 KGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHEN--DGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVY  441 (705)
Q Consensus       364 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~--~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~lV~  441 (705)
                      ++|+..+.||+|+||+||+|++..+++.||||+++...  ....+.+.+|+++|++++||||+++++++.. ++.+++||
T Consensus         2 d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~Hp~Iv~~~~~~~~-~~~~~iv~   80 (298)
T d1gz8a_           2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHT-ENKLYLVF   80 (298)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEC-------CCHHHHHHHHHHTTCCCTTBCCEEEEEEE-TTEEEEEE
T ss_pred             CCCEeccEEecCcCeEEEEEEECCCCCEEEEEEEehhhcChHHHHHHHHHHHHHHhCCCCcEEEecccccc-ccceeEEE
Confidence            57889999999999999999999999999999996543  2346789999999999999999999999876 77899999


Q ss_pred             eeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecCCC
Q 005257          442 DYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHG  521 (705)
Q Consensus       442 E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~~~  521 (705)
                      ||+.+ ++..++..... ..+++.++..++.|++.||+|||+   ++||||||||+|||++.++++||+|||+|+.....
T Consensus        81 e~~~~-~~~~~~~~~~~-~~l~e~~~~~~~~qil~~L~yLH~---~~IiHrDiKpeNIl~~~~~~~kl~DFG~a~~~~~~  155 (298)
T d1gz8a_          81 EFLHQ-DLKKFMDASAL-TGIPLPLIKSYLFQLLQGLAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP  155 (298)
T ss_dssp             ECCSE-EHHHHHHHTTT-TCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTSCEEECSTTHHHHHCCC
T ss_pred             eecCC-chhhhhhhhcc-cCCCHHHHHHHHHHHHHHHHHhhc---CCEEccccCchheeecccCcceeccCCcceeccCC
Confidence            99975 55555544332 269999999999999999999998   99999999999999999999999999999876543


Q ss_pred             CcceeeeeeccccCCCccccccCC-CCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHH-hCchhHHHHHhhhc
Q 005257          522 QVASTTRVVGTVGYLAPEVFSSGR-ASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMV-QGKLLDALDARLRA  599 (705)
Q Consensus       522 ~~~~~~~~~gt~~y~APE~~~~~~-~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~-~~~~~~~id~~l~~  599 (705)
                      ... .....||+.|+|||.+.... ++.++||||+||++|||++|+.||......  +....... .+...+...+....
T Consensus       156 ~~~-~~~~~gt~~y~apE~~~~~~~~~~~~DiwSlGvily~m~~G~~Pf~~~~~~--~~~~~i~~~~~~~~~~~~~~~~~  232 (298)
T d1gz8a_         156 VRT-YTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI--DQLFRIFRTLGTPDEVVWPGVTS  232 (298)
T ss_dssp             SBC-TTCCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH--HHHHHHHHHHCCCCTTTSTTGGG
T ss_pred             ccc-ceeecccceeeehhhhccccCCCccccccccchhhhHHhhCCCCCCCCCHH--HHHHHHHHhcCCCchhhcccccc
Confidence            322 23357999999999976655 588999999999999999999999865421  22222111 11110000000000


Q ss_pred             ----------CCCCC-----HHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 005257          600 ----------KGGFD-----EDEVERVLHLGLLCAYPDPRARPTMRQVVKV  635 (705)
Q Consensus       600 ----------~~~~~-----~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  635 (705)
                                .....     ....+.+.+++.+|++.||++|||+.|++++
T Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~t~~ell~H  283 (298)
T d1gz8a_         233 MPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAH  283 (298)
T ss_dssp             STTCCTTSCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred             ccccccccccccccchhhhccCCCHHHHHHHHHHccCChhHCcCHHHHhCC
Confidence                      00000     0112567889999999999999999999985

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.1e-45  Score=378.00  Aligned_cols=242  Identities=25%  Similarity=0.380  Sum_probs=198.4

Q ss_pred             hCCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCCc------hhHHHHHHHHHHhccCC--CCCcceeeeeeeecc
Q 005257          363 TKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHEND------GGTRAFLAEISSLGRLK--HKSLVGLRGWCKREK  434 (705)
Q Consensus       363 t~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~------~~~~~~~~Ei~~l~~l~--Hpniv~l~g~~~~~~  434 (705)
                      .++|+..++||+|+||+||+|++..+++.||||++.....      .....+.+|+.++++++  ||||+++++++.. .
T Consensus         3 ~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~~~h~nIv~~~~~~~~-~   81 (273)
T d1xwsa_           3 ESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFER-P   81 (273)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEEC-S
T ss_pred             CCeEEEeEEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccchhhhhHHHHHHHHHHHHHHhccCCCCccEEEEEEee-C
Confidence            3578999999999999999999999999999999865421      12234678999999996  8999999998876 6


Q ss_pred             CceEEEEeeCCC-CChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccC-CCeeeeee
Q 005257          435 GSLMLVYDYMEN-GSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKE-MNGRLGDF  512 (705)
Q Consensus       435 ~~~~lV~E~~~~-gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~-~~~kL~DF  512 (705)
                      +..++||||+.+ +++.+++....   .+++.++..++.||+.||.|||+   ++|+||||||+|||++.+ +.+||+||
T Consensus        82 ~~~~lv~e~~~~~~~l~~~~~~~~---~l~e~~~~~~~~qi~~al~~lH~---~~iiHrDiKp~NIll~~~~~~vkl~DF  155 (273)
T d1xwsa_          82 DSFVLILERPEPVQDLFDFITERG---ALQEELARSFFWQVLEAVRHCHN---CGVLHRDIKDENILIDLNRGELKLIDF  155 (273)
T ss_dssp             SEEEEEEECCSSEEEHHHHHHHHC---SCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEETTTTEEEECCC
T ss_pred             CeEEEEEEeccCcchHHHHHhccC---CCCHHHHHHHHHHHHHHHHHHHH---CCCccccCcccceEEecCCCeEEECcc
Confidence            789999999976 67878876543   69999999999999999999999   999999999999999854 78999999


Q ss_pred             ccceecCCCCcceeeeeeccccCCCccccccCCC-CccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhH
Q 005257          513 GLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRA-STQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLD  591 (705)
Q Consensus       513 Gla~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~-s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~  591 (705)
                      |+|+......   .+...||+.|||||++.+..+ +.++||||+||++|||++|+.||....         .+..+.   
T Consensus       156 G~a~~~~~~~---~~~~~GT~~y~aPE~~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~---------~i~~~~---  220 (273)
T d1xwsa_         156 GSGALLKDTV---YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE---------EIIRGQ---  220 (273)
T ss_dssp             TTCEECCSSC---BCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH---------HHHHCC---
T ss_pred             ccceeccccc---ccccccCCCcCCHHHHcCCCCCCcccccccceeeehhHhhCCCCCCCch---------HHhhcc---
Confidence            9998764432   234689999999999987665 577899999999999999999997521         111111   


Q ss_pred             HHHHhhhcCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 005257          592 ALDARLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKV  635 (705)
Q Consensus       592 ~id~~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  635 (705)
                               ..++......+.+++.+||+.||++|||++|++++
T Consensus       221 ---------~~~~~~~s~~~~~li~~~L~~dp~~R~s~~eil~h  255 (273)
T d1xwsa_         221 ---------VFFRQRVSSECQHLIRWCLALRPSDRPTFEEIQNH  255 (273)
T ss_dssp             ---------CCCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred             ---------cCCCCCCCHHHHHHHHHHccCCHhHCcCHHHHhcC
Confidence                     11222233567889999999999999999999874

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=1.7e-43  Score=370.67  Aligned_cols=263  Identities=18%  Similarity=0.257  Sum_probs=204.6

Q ss_pred             CCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCCchhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEEEEee
Q 005257          364 KGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVYDY  443 (705)
Q Consensus       364 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~lV~E~  443 (705)
                      ++|+..+.||+|+||+||+|++..+++.||||++.....  .+++..|+++++.++|+|++..+..|...++..++||||
T Consensus         7 ~rY~l~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~--~~~~~~E~~i~~~l~~~~~i~~~~~~~~~~~~~~ivme~   84 (299)
T d1ckia_           7 NRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK--HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMEL   84 (299)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEESCTT--SCCHHHHHHHHHHSTTSTTCCCEEEEEEETTEEEEEEEC
T ss_pred             CEEEEeEEEeeCCCcEEEEEEECCCCCEEEEEEEchhcc--CHHHHHHHHHHHHccCCCcccEEEEEEecCCEEEEEEEE
Confidence            468999999999999999999999999999998865432  345788999999999998888887777768889999999


Q ss_pred             CCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEc---cCCCeeeeeeccceecCC
Q 005257          444 MENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLD---KEMNGRLGDFGLARMHGH  520 (705)
Q Consensus       444 ~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld---~~~~~kL~DFGla~~~~~  520 (705)
                      + +++|...+.....  .+++..+..++.|++.||+|||+   ++|+||||||+|||++   .+..+||+|||+|+....
T Consensus        85 ~-~~~l~~~~~~~~~--~~~~~~~~~~~~qi~~~l~~lH~---~~iiHrDiKp~NIl~~~~~~~~~vkl~DFG~a~~~~~  158 (299)
T d1ckia_          85 L-GPSLEDLFNFCSR--KFSLKTVLLLADQMISRIEYIHS---KNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRD  158 (299)
T ss_dssp             C-CCBHHHHHHHTTT--CCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEECCGGGTTCEEECCCSSCEECBC
T ss_pred             c-CCchhhhhhhccC--CCcHHHHHHHHHHHHHHHHHHHH---CCeeeccCCHhhccccccCCCceeeeeccCcceeccc
Confidence            9 5577776655433  69999999999999999999999   9999999999999985   456799999999998754


Q ss_pred             CCc------ceeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhHHHH
Q 005257          521 GQV------ASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALD  594 (705)
Q Consensus       521 ~~~------~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~~id  594 (705)
                      ...      .......||+.|||||++.+..++.++|||||||++|||++|+.||....................... .
T Consensus       159 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~-~  237 (299)
T d1ckia_         159 ARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTP-I  237 (299)
T ss_dssp             TTTCCBCCCCBCCSCCCCSSSCCHHHHTTBCCCHHHHHHHHHHHHHHHHHSSCTTCCCC-------HHHHHHHHHHSC-H
T ss_pred             cccccceeccccCCcCCCccccCHHHHhCCCCCChhhEEecCHHHHHHHhCCCcccccchHHHHHHHHHhhcccCCCC-h
Confidence            332      123346899999999999999999999999999999999999999976443211111111111000000 0


Q ss_pred             HhhhcCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHhccc
Q 005257          595 ARLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLEGKIE  641 (705)
Q Consensus       595 ~~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~  641 (705)
                      +.+.  .    ..++.+.+++..||+.+|++||++.++.+.|+....
T Consensus       238 ~~~~--~----~~p~~~~~li~~cl~~~p~~RP~~~~i~~~l~~~~~  278 (299)
T d1ckia_         238 EVLC--K----GYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFH  278 (299)
T ss_dssp             HHHT--T----TSCHHHHHHHHHHHHSCTTCCCCHHHHHHHHHHHHH
T ss_pred             hHhc--c----CCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHHH
Confidence            0111  1    223568889999999999999999999998887643

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=9.7e-44  Score=373.56  Aligned_cols=264  Identities=24%  Similarity=0.316  Sum_probs=198.5

Q ss_pred             hCCCCcceEEeecCceEEEEEEEcCC-CeEEEEEEeccCC--chhHHHHHHHHHHhccC---CCCCcceeeeeeee----
Q 005257          363 TKGFSEENVIGVGGNGKVYKGVLEGG-GAEIAVKRISHEN--DGGTRAFLAEISSLGRL---KHKSLVGLRGWCKR----  432 (705)
Q Consensus       363 t~~f~~~~~LG~G~fg~Vy~~~~~~~-~~~vavK~i~~~~--~~~~~~~~~Ei~~l~~l---~Hpniv~l~g~~~~----  432 (705)
                      .++|+..+.||+|+||+||+|++..+ ++.||||+++...  ......+.+|+.+|+.|   +||||++++++|..    
T Consensus         6 ~~~Y~i~~~LG~G~fg~V~~a~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~~l~~l~~~~HpnIv~~~~~~~~~~~~   85 (305)
T d1blxa_           6 DQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTD   85 (305)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEECS
T ss_pred             cCCEEEEEEEecccCeEEEEEEEECCCCEEEEEEEEehhhccchHHHHHHHHHHHHHHHhhcCCCCcceeeeeecccccc
Confidence            46899999999999999999998654 6789999986542  22334566777777666   79999999998853    


Q ss_pred             ccCceEEEEeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeee
Q 005257          433 EKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDF  512 (705)
Q Consensus       433 ~~~~~~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DF  512 (705)
                      ....++++|||++++++.......  ...+++..+..++.|++.||+|||+   ++|+||||||+|||++.++.+||+||
T Consensus        86 ~~~~~~~~~e~~~~~~~~~~~~~~--~~~~~~~~~~~~~~qi~~aL~yLH~---~~ivHrDiKp~NILi~~~~~~kl~df  160 (305)
T d1blxa_          86 RETKLTLVFEHVDQDLTTYLDKVP--EPGVPTETIKDMMFQLLRGLDFLHS---HRVVHRDLKPQNILVTSSGQIKLADF  160 (305)
T ss_dssp             SEEEEEEEEECCSCBHHHHHHHSC--TTCSCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTCCEEECSC
T ss_pred             cCceEEEEEEeccCCchhhhhhcc--CCCCCHHHHHHHHHHHHHHHHHHHh---CCEEecCCCccEEEEcCCCCeeecch
Confidence            234689999999887766544332  2368999999999999999999998   99999999999999999999999999


Q ss_pred             ccceecCCCCcceeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHH-hCchhH
Q 005257          513 GLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMV-QGKLLD  591 (705)
Q Consensus       513 Gla~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~-~~~~~~  591 (705)
                      |+++......  ......||+.|||||++.+..++.++||||+||++|||++|+.||......  +....... .+....
T Consensus       161 g~~~~~~~~~--~~~~~~gT~~Y~APE~~~~~~y~~~~DiwSlG~il~ell~g~~pf~~~~~~--~~~~~i~~~~~~~~~  236 (305)
T d1blxa_         161 GLARIYSFQM--ALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDV--DQLGKILDVIGLPGE  236 (305)
T ss_dssp             CSCCCCCGGG--GGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH--HHHHHHHHHHCCCCG
T ss_pred             hhhhhhcccc--cCCCcccChhhcCcchhcCCCCChhehhhchHHHHHHHHHCCCCCCCCCHH--HHHHHHHHhhCCCch
Confidence            9998654332  234468999999999999999999999999999999999999999865431  11111111 000000


Q ss_pred             -HHH-------HhhhcC-----CCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 005257          592 -ALD-------ARLRAK-----GGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKV  635 (705)
Q Consensus       592 -~id-------~~l~~~-----~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  635 (705)
                       ...       ......     ..+.....+.+.+|+.+||+.||++|||+.|++++
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~sa~e~L~H  293 (305)
T d1blxa_         237 EDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSH  293 (305)
T ss_dssp             GGSCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred             hcccccccchhhhhccccccchhhccccCCHHHHHHHHHHCcCChhHCcCHHHHhcC
Confidence             000       000000     00111223567889999999999999999999874

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

Probab=100.00  E-value=2.1e-43  Score=367.71  Aligned_cols=260  Identities=27%  Similarity=0.359  Sum_probs=197.7

Q ss_pred             CCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCC--chhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEEEE
Q 005257          364 KGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHEN--DGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVY  441 (705)
Q Consensus       364 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~--~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~lV~  441 (705)
                      ++|...++||+|+||+||+|.++ +++.||||+++...  ....+.+.+|+.+|++++||||+++++++.. .+..++++
T Consensus         2 ~~Y~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~-~~~~~i~~   79 (286)
T d1ob3a_           2 EKYHGLEKIGEGTYGVVYKAQNN-YGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHT-KKRLVLVF   79 (286)
T ss_dssp             CSEEEEEEEEEETTEEEEEEEET-TSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEEC-SSCEEEEE
T ss_pred             CCceeccEEecCCCcEEEEEEeC-CCCEEEEEEEehhhcChHHHHHHHHHHHHHHhCCCCcEEeeeeeccc-CCceeEEE
Confidence            57888999999999999999986 67899999997653  2335789999999999999999999999886 67899999


Q ss_pred             eeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecCCC
Q 005257          442 DYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHG  521 (705)
Q Consensus       442 E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~~~  521 (705)
                      ||+.++.+..+....   ..+++.++..++.||+.||+|||+   .+|+||||||+|||++.++.+||+|||++......
T Consensus        80 e~~~~~~~~~~~~~~---~~l~~~~~~~i~~qi~~~L~~LH~---~~IvHrDiKp~NIll~~~~~~kl~DfG~a~~~~~~  153 (286)
T d1ob3a_          80 EHLDQDLKKLLDVCE---GGLESVTAKSFLLQLLNGIAYCHD---RRVLHRDLKPQNLLINREGELKIADFGLARAFGIP  153 (286)
T ss_dssp             ECCSEEHHHHHHTST---TCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC-
T ss_pred             EeehhhhHHHHHhhc---CCcchhhhHHHHHHHHHHHHHhcc---CcEEecCCCCceeeEcCCCCEEecccccceecccC
Confidence            999877666665332   369999999999999999999998   99999999999999999999999999999876543


Q ss_pred             CcceeeeeeccccCCCccccccC-CCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHH-hCchhHH----H--
Q 005257          522 QVASTTRVVGTVGYLAPEVFSSG-RASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMV-QGKLLDA----L--  593 (705)
Q Consensus       522 ~~~~~~~~~gt~~y~APE~~~~~-~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~-~~~~~~~----i--  593 (705)
                      .. ......|++.|+|||.+.+. .++.++|||||||++|||++|+.||.+...  .+....... .+.....    .  
T Consensus       154 ~~-~~~~~~~~~~y~~pE~~~~~~~~~~~~DiwslGv~l~el~~G~~pf~~~~~--~~~~~~i~~~~~~~~~~~~~~~~~  230 (286)
T d1ob3a_         154 VR-KYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSE--ADQLMRIFRILGTPNSKNWPNVTE  230 (286)
T ss_dssp             ---------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSH--HHHHHHHHHHHCCCCTTTSTTGGG
T ss_pred             cc-ccceecccchhhhHHHHhCCCCCCcceeehhcCcHHHHHHHCCCCCCCCCH--HHHHHHHHHhhCCCChhhccchhh
Confidence            32 22335789999999998764 579999999999999999999999976542  121111111 1110000    0  


Q ss_pred             ----HHhhhcCC-----CCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHH
Q 005257          594 ----DARLRAKG-----GFDEDEVERVLHLGLLCAYPDPRARPTMRQVVK  634 (705)
Q Consensus       594 ----d~~l~~~~-----~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~  634 (705)
                          ........     .......+.+.+++.+||+.||++|||++|+++
T Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~ell~  280 (286)
T d1ob3a_         231 LPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALE  280 (286)
T ss_dssp             STTCCTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             hhhcccccccccCcchhhhcccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence                00000000     001112356789999999999999999999985

>d1dhkb_ b.29.1.1 (B:) Phytohemagglutinin-L, PHA-L, also arcelin {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]}

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Phytohemagglutinin-L, PHA-L, also arcelin
species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]

Probab=100.00  E-value=7.5e-43  Score=344.27  Aligned_cols=196  Identities=29%  Similarity=0.488  Sum_probs=162.4

Q ss_pred             ceeeEEeCCCCCCCeEEEcceEee-cCcEEecCCCCCeEEEEEcCCCccccCCCCCcccceEEEEEEEEecCCCCCCCCc
Q 005257           24 SAVDFVFNGFNSSNLSLYGTATVE-SRILTLTNSTTFTIGRALYPSKIPTKRPNSSYVYPFSTSFIFAMAPYKGVLAGHG  102 (705)
Q Consensus        24 ~~~~f~f~~f~~~~~~~~g~a~~~-~~~l~lt~~~~~~~Gr~~y~~pv~l~~~~~~~~~sF~t~F~f~i~~~~~~~~g~G  102 (705)
                      ..++|+|++|++.||+|+|||++. +|.||||++..+++|||+|++||+||++.+++++||+|+|+|.|.+.+...+|||
T Consensus         2 ~~~sF~~~~F~~~~l~l~GdA~v~~~g~i~LT~~~~~~~G~~~y~~Pi~l~~~~~~~~~sF~t~F~f~i~~~~~~~~gdG   81 (204)
T d1dhkb_           2 TETSFIIDAFNKTNLILQGDATVSSNGNLQLSYNSYDSMSRAFYSAPIQIRDSTTGNVASFDTNFTMNIRTHRQANSAVG   81 (204)
T ss_dssp             CCCEEEESSCCGGGEEEESSEEECTTSCEEESSSCSSEEEEEEESSCEESEETTTTEECEEEEEEEEEEECCC---CCSE
T ss_pred             ccceEECCCCCccCeeEecceEEcCCCeEEeCCCCCCCEEEEEeCCCEeccCCCCcccccEEEEEEEEEecCCCCCCCce
Confidence            468999999999999999999986 6799999999999999999999999999999999999999999998877778999


Q ss_pred             eEEEEeeCCCCCCCCCCCcccccccCCCCCCCCcEEEEEeecccCCCCCCCCCCeeEEecCCCcccccccccccCCCCCC
Q 005257          103 LVFLFVPFHGIKGATEAQHLGLFNRTNDGNSSNHVFGVEFDVFKNQEFNDIDENHVGIDVNSLTSVSAHAAGYWPDNQTD  182 (705)
Q Consensus       103 ~aF~~~~~~~~~~~~~g~~lGl~~~~~~~~~~~~~vaVEFDt~~n~~~~d~~~~Hvgidvns~~S~~~~~~~~~~~~~~~  182 (705)
                      |||+++|...                   ...++.|||||||+.|         |+++|+++..+....           
T Consensus        82 laf~~~~~~~-------------------~~~~~~~~vefDt~~n---------~~~~d~~~~~~~~~~-----------  122 (204)
T d1dhkb_          82 LDFVLVPVQP-------------------ESKGDTVTVEFDTFLS---------RISIDVNNNDIKSVP-----------  122 (204)
T ss_dssp             EEEEEEEC-------------------------CCEEEEEETTTT---------EEEEEETTEEEEEEE-----------
T ss_pred             EEEEecCCCC-------------------CCCCcEeeEeeEcccc---------cccCccccccccccc-----------
Confidence            9999998632                   1234789999999875         667777765432221           


Q ss_pred             CCCCCCCCCCCCCccccceeecCCCcceEEEEEe--cCceEEEEEEEccCCCCCCCceeeeecCccccccceeccccccc
Q 005257          183 SSGSNSNSGTGDDEKSFKELKLNNGKNYQVWIDY--ADSFINITMVEAGMKRPKRPLLSVPLNLSGVLEDEMYVGFTAAT  260 (705)
Q Consensus       183 ~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~I~Y--~~~~~~v~~~~~~~~~~~~~~ls~~vdl~~~l~~~~~vGfsast  260 (705)
                                       ..+.+.+|+.++|||+|  ..++|+|++....  +|..+.|+..+||+.+||++|||||||||
T Consensus       123 -----------------~~~~~~~g~~~~v~I~Yd~~~~~L~V~l~~~~--~~~~~~l~~~vdL~~~l~~~~yvGFSAaT  183 (204)
T d1dhkb_         123 -----------------WDVHDYDGQNAEVRITYNSSTKVFSVSLSNPS--TGKSNNVSTTVELEKEVYDWVSVGFSATS  183 (204)
T ss_dssp             -----------------CCGGGTTTSCEEEEEEEETTTTEEEEEEECTT--TCCEEEEEEECCCCSGGGSEEEEEEEEEE
T ss_pred             -----------------cccEecCCCEEEEEEEEcCCCEEEEEEEecCC--CCCceeEEEEecchhccCCcEEEEEEeec
Confidence                             13467899999999999  5668888887554  57778899999999999999999999999


Q ss_pred             ccc---cccceeeeeeeccc
Q 005257          261 GQL---VESHKILAWSFSNT  277 (705)
Q Consensus       261 g~~---~~~h~i~~wsf~~~  277 (705)
                      |..   .|.|+|++|+|+++
T Consensus       184 G~~~~~~e~H~IlsWsFss~  203 (204)
T d1dhkb_         184 GAYQWSYETHDVLSWSFSSK  203 (204)
T ss_dssp             CSGGGSCCEEEEEEEEEEEE
T ss_pred             CCCCCCceeeEEEEEEEEec
Confidence            953   58899999999974

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.7e-43  Score=374.95  Aligned_cols=260  Identities=22%  Similarity=0.268  Sum_probs=197.1

Q ss_pred             CCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCCchhHHHHHHHHHHhccCCCCCcceeeeeeeec-----cCceEE
Q 005257          365 GFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLVGLRGWCKRE-----KGSLML  439 (705)
Q Consensus       365 ~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~-----~~~~~l  439 (705)
                      +|...++||+|+||+||+|++..+++.||||++......    ..+|+++|++++||||+++++++...     ...++|
T Consensus        21 ~Y~~~k~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~----~~~Ei~il~~l~h~niv~~~~~~~~~~~~~~~~~~~l   96 (350)
T d1q5ka_          21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRF----KNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNL   96 (350)
T ss_dssp             EEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSSS----CCHHHHHHHHCCCTTBCCEEEEEEEC--CCSCCEEEE
T ss_pred             CcEeeeEEeeCcCeEEEEEEECCCCCEEEEEEECccchH----HHHHHHHHHhcCCCCCCcEEEEEEecCccCCceEEEE
Confidence            467788999999999999999999999999999765332    24699999999999999999988532     235789


Q ss_pred             EEeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCC-Ceeeeeeccceec
Q 005257          440 VYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEM-NGRLGDFGLARMH  518 (705)
Q Consensus       440 V~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~-~~kL~DFGla~~~  518 (705)
                      ||||++++.+..+.........+++.++..++.||+.||+|||+   ++|+||||||+|||++.++ .+||+|||+++..
T Consensus        97 v~Ey~~~~~~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~yLH~---~~IiHrDiKp~NILl~~~~~~~kl~DFG~a~~~  173 (350)
T d1q5ka_          97 VLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL  173 (350)
T ss_dssp             EEECCSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHT---TTEECCCCCGGGEEECTTTCCEEECCCTTCEEC
T ss_pred             EEeccCCccHHHHHhhhhccCCCCHHHHHHHHHHHHHHHHHHHh---cCCcccCCCcceEEEecCCCceeEecccchhhc
Confidence            99999876555444333333479999999999999999999998   9999999999999999775 8999999999877


Q ss_pred             CCCCcceeeeeeccccCCCcccccc-CCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHH-hCch-hHHHHH
Q 005257          519 GHGQVASTTRVVGTVGYLAPEVFSS-GRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMV-QGKL-LDALDA  595 (705)
Q Consensus       519 ~~~~~~~~~~~~gt~~y~APE~~~~-~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~-~~~~-~~~id~  595 (705)
                      ......  ...+||+.|+|||.+.+ ..++.++||||+||++|||++|+.||......  +....... .|.. .+.+..
T Consensus       174 ~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~~DIwSlG~il~el~~g~~pf~~~~~~--~~l~~i~~~~g~~~~~~~~~  249 (350)
T d1q5ka_         174 VRGEPN--VSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGV--DQLVEIIKVLGTPTREQIRE  249 (350)
T ss_dssp             CTTSCC--CSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHTSCSSCCSSHH--HHHHHHHHHHCCCCHHHHHH
T ss_pred             cCCccc--ccccccccccChHHhhcccCCCcceeecccceEEEehhhCCCCCCCCCHH--HHHHHHHHHhCCChHHhhhh
Confidence            554432  23579999999999865 56899999999999999999999999765431  21111111 1111 111111


Q ss_pred             hhhcC--------------CCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 005257          596 RLRAK--------------GGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKV  635 (705)
Q Consensus       596 ~l~~~--------------~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  635 (705)
                      .....              ..........+.+|+.+||+.||++|||+.|++++
T Consensus       250 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~H  303 (350)
T d1q5ka_         250 MNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAH  303 (350)
T ss_dssp             HCC---CCCCCCCCCCCGGGTSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred             hccchhhccccccccCchhhhcccCCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence            10000              00011233567889999999999999999999874

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=100.00  E-value=1.4e-42  Score=362.62  Aligned_cols=262  Identities=20%  Similarity=0.245  Sum_probs=206.8

Q ss_pred             CCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCCchhHHHHHHHHHHhccCCC-CCcceeeeeeeeccCceEEEEe
Q 005257          364 KGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLKH-KSLVGLRGWCKREKGSLMLVYD  442 (705)
Q Consensus       364 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~~~~~~~~~Ei~~l~~l~H-pniv~l~g~~~~~~~~~~lV~E  442 (705)
                      ++|.+.+.||+|+||+||+|++..+++.||||+++....  .+.+.+|++.+..|+| +|++.+++++.. +...++|||
T Consensus         5 ~~Y~i~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~--~~~~~~e~~~~~~l~~~~~i~~~~~~~~~-~~~~~~vme   81 (293)
T d1csna_           5 VHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSD--APQLRDEYRTYKLLAGCTGIPNVYYFGQE-GLHNVLVID   81 (293)
T ss_dssp             TTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCTT--SCCHHHHHHHHHHTTTCTTCCCEEEEEEE-TTEEEEEEE
T ss_pred             CceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEccccC--cHHHHHHHHHHHHhcCCCCCCEEEEEeec-CCccEEEEE
Confidence            578899999999999999999999999999998865432  3456788888888865 889999987765 778899999


Q ss_pred             eCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEcc-----CCCeeeeeecccee
Q 005257          443 YMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDK-----EMNGRLGDFGLARM  517 (705)
Q Consensus       443 ~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~-----~~~~kL~DFGla~~  517 (705)
                      |+ +++|.+++.....  .+++.++..++.|++.||+|||+   ++|+||||||+|||++.     ++.+||+|||+|+.
T Consensus        82 ~~-~~~l~~~~~~~~~--~~~~~~~~~i~~q~~~~l~~lH~---~giiHrDiKp~Nili~~~~~~~~~~vkl~DFG~a~~  155 (293)
T d1csna_          82 LL-GPSLEDLLDLCGR--KFSVKTVAMAAKQMLARVQSIHE---KSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKF  155 (293)
T ss_dssp             CC-CCBHHHHHHHTTT--CCCHHHHHHHHHHHHHHHHHHHT---TTEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEE
T ss_pred             ec-CCCHHHHHHhhcc--chhhHHHHHHHHHHHHHHHHHHH---CCceeccCCccceeecCcccccCCceEEcccceeEE
Confidence            99 6899998876543  68999999999999999999998   99999999999999974     56799999999997


Q ss_pred             cCCCCcc------eeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhH
Q 005257          518 HGHGQVA------STTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLD  591 (705)
Q Consensus       518 ~~~~~~~------~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~  591 (705)
                      .......      .....+||+.|||||++.+..++.++|||||||++|||++|+.||..............+...+...
T Consensus       156 ~~~~~~~~~~~~~~~~~~~GT~~y~aPE~~~~~~~~~~~DiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~i~~~~~~~  235 (293)
T d1csna_         156 YRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQST  235 (293)
T ss_dssp             SBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHHHHHHHS
T ss_pred             cccCccccceeecccCceEEchhhcCHHHhcCCCCChHHHHHHhhHHHHHHHhCCCcCCCccchhHHHHHHHHHhccCCC
Confidence            6543221      2334689999999999999999999999999999999999999998644322221112211111100


Q ss_pred             HHHHhhhcCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHhccc
Q 005257          592 ALDARLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLEGKIE  641 (705)
Q Consensus       592 ~id~~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~  641 (705)
                      .. +.+.  ..+    ++.+.+++..|+..+|++||+++.+.+.|++..+
T Consensus       236 ~~-~~l~--~~~----p~~l~~ii~~~~~~~~~~rP~y~~l~~~l~~~~~  278 (293)
T d1csna_         236 PL-RELC--AGF----PEEFYKYMHYARNLAFDATPDYDYLQGLFSKVLE  278 (293)
T ss_dssp             CH-HHHT--TTS----CHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHH
T ss_pred             Ch-HHhc--CCC----CHHHHHHHHHHhcCCcccCcCHHHHHHHHHHHHH
Confidence            00 0111  112    3567888999999999999999999998887655

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.4e-42  Score=366.83  Aligned_cols=265  Identities=26%  Similarity=0.357  Sum_probs=197.2

Q ss_pred             CCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccC--CchhHHHHHHHHHHhccCCCCCcceeeeeeeec-------c
Q 005257          364 KGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHE--NDGGTRAFLAEISSLGRLKHKSLVGLRGWCKRE-------K  434 (705)
Q Consensus       364 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~--~~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~-------~  434 (705)
                      ++|+..+.||+|+||+||+|++..+|+.||||++...  .....+.+.+|+++|++++||||+++++++...       +
T Consensus        10 ~rY~i~~~LG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~h~nii~~~~~~~~~~~~~~~~~   89 (318)
T d3blha1          10 SKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCK   89 (318)
T ss_dssp             GGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC----CTTSSCHHHHHHHHHHHHCCCTTBCCEEEEEEC---------
T ss_pred             CCEEEEEEEecCcCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHHhcCCCccceEeeeecccccccccC
Confidence            5788999999999999999999999999999998654  334567789999999999999999999987542       3


Q ss_pred             CceEEEEeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeecc
Q 005257          435 GSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGL  514 (705)
Q Consensus       435 ~~~~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGl  514 (705)
                      +.+++||||++++.+......   ...+++.++..++.|++.||.|||+   ++|+||||||+|||++.++.+||+|||+
T Consensus        90 ~~~~iv~e~~~~~~~~~~~~~---~~~~~~~~~~~i~~qil~~l~~lH~---~~ivHrDlKp~NILl~~~~~~kl~dfg~  163 (318)
T d3blha1          90 GSIYLVFDFCEHDLAGLLSNV---LVKFTLSEIKRVMQMLLNGLYYIHR---NKILHRDMKAANVLITRDGVLKLADFGL  163 (318)
T ss_dssp             -CEEEEEECCCEEHHHHHTCT---TCCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTSCEEECCCTT
T ss_pred             ceEEEEEeccCCCccchhhhc---ccccccHHHHHHHHHHHHHHHHhcc---CCEEecCcCchheeecCCCcEEeeecce
Confidence            468999999988766654432   2368999999999999999999998   9999999999999999999999999999


Q ss_pred             ceecCCCCcc---eeeeeeccccCCCccccccC-CCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchh
Q 005257          515 ARMHGHGQVA---STTRVVGTVGYLAPEVFSSG-RASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLL  590 (705)
Q Consensus       515 a~~~~~~~~~---~~~~~~gt~~y~APE~~~~~-~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~  590 (705)
                      ++........   .....+||+.|+|||++.+. .++.++||||+||++|||++|+.||.+............. .+...
T Consensus       164 ~~~~~~~~~~~~~~~~~~~gT~~Y~aPE~~~~~~~~~~k~DiwSlGvil~el~~g~~pf~~~~~~~~~~~i~~~-~~~~~  242 (318)
T d3blha1         164 ARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQL-CGSIT  242 (318)
T ss_dssp             CEECCC-----CCCCCSCCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHH-HCCCC
T ss_pred             eeecccccccccccccceecCHHHhhHHHHcCCCCCCcHHHcccCCceeeeHhhCCCCCCCCCHHHHHHHHHHh-cCCCC
Confidence            9876543221   12235799999999998765 6899999999999999999999999765431111111111 11110


Q ss_pred             HHHHH---------hhhc--CCCCCH-H------HHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 005257          591 DALDA---------RLRA--KGGFDE-D------EVERVLHLGLLCAYPDPRARPTMRQVVKV  635 (705)
Q Consensus       591 ~~id~---------~l~~--~~~~~~-~------~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  635 (705)
                      .....         .+..  ...... +      ....+.+|+.+||+.||++|||++|++++
T Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~sa~elL~H  305 (318)
T d3blha1         243 PEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNH  305 (318)
T ss_dssp             TTTSTTCCCC-------CCSSCCBCHHHHHHHHHCCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred             hhhccccchhhhhhhhcccccccccchhhhccccCCHHHHHHHHHHCcCChhHCcCHHHHHcC
Confidence            00000         0000  000001 0      12356789999999999999999999875

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.1e-42  Score=367.73  Aligned_cols=259  Identities=22%  Similarity=0.312  Sum_probs=196.4

Q ss_pred             hCCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccC--CchhHHHHHHHHHHhccCCCCCcceeeeeeeecc-----C
Q 005257          363 TKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHE--NDGGTRAFLAEISSLGRLKHKSLVGLRGWCKREK-----G  435 (705)
Q Consensus       363 t~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~--~~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~-----~  435 (705)
                      .++|+..+.||+|+||+||+|.+..+|+.||||+++..  .....+.+.+|+++|+.++||||++++++|...+     .
T Consensus        17 ~~~Y~~i~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~hpniv~l~~~~~~~~~~~~~~   96 (346)
T d1cm8a_          17 RAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFT   96 (346)
T ss_dssp             BSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCC
T ss_pred             CCcEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEchhhcChHHHHHHHHHHHHHHhcCCCCeeEEEEEeccCccccccc
Confidence            46789999999999999999999999999999999754  2334567899999999999999999999987532     2


Q ss_pred             ceEEEEeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccc
Q 005257          436 SLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLA  515 (705)
Q Consensus       436 ~~~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla  515 (705)
                      .+++||||+ +.+|..++...    .+++..+..++.||+.||.|||+   ++|+||||||+|||++.++.+||+|||+|
T Consensus        97 ~~~lv~e~~-~~~l~~~~~~~----~l~~~~~~~~~~qi~~aL~~LH~---~~IiHrDiKp~NIL~~~~~~~kl~Dfg~a  168 (346)
T d1cm8a_          97 DFYLVMPFM-GTDLGKLMKHE----KLGEDRIQFLVYQMLKGLRYIHA---AGIIHRDLKPGNLAVNEDCELKILDFGLA  168 (346)
T ss_dssp             CCEEEEECC-SEEHHHHHHHC----CCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECCCTTC
T ss_pred             eEEEEEecc-cccHHHHHHhc----cccHHHHHHHHHHHHHHHHHHHh---CCCcccccCcchhhcccccccccccccce
Confidence            579999999 55777776532    59999999999999999999999   99999999999999999999999999999


Q ss_pred             eecCCCCcceeeeeeccccCCCcccccc-CCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHH-HhCchhH--
Q 005257          516 RMHGHGQVASTTRVVGTVGYLAPEVFSS-GRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELM-VQGKLLD--  591 (705)
Q Consensus       516 ~~~~~~~~~~~~~~~gt~~y~APE~~~~-~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~-~~~~~~~--  591 (705)
                      +......    +...||+.|+|||++.+ ..++.++||||+||++|||++|+.||......  +...... ..+....  
T Consensus       169 ~~~~~~~----~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~ell~g~~pf~~~~~~--~~~~~~~~~~~~~~~~~  242 (346)
T d1cm8a_         169 RQADSEM----TGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHL--DQLKEIMKVTGTPPAEF  242 (346)
T ss_dssp             EECCSSC----CSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHHHHHHHCCCCHHH
T ss_pred             eccCCcc----ccccccccccCHHHHcCCCCCCccchhhcchHHHHHHHHCcCCCCCCChH--HHHHHHHhccCCCcHHH
Confidence            8765432    34579999999999876 45789999999999999999999999765431  1111111 0111100  


Q ss_pred             ----------HHHHhhhcCCC-----CCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 005257          592 ----------ALDARLRAKGG-----FDEDEVERVLHLGLLCAYPDPRARPTMRQVVKV  635 (705)
Q Consensus       592 ----------~id~~l~~~~~-----~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  635 (705)
                                .....+.....     ........+.+|+.+||..||++|||+.|++++
T Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~eiL~H  301 (346)
T d1cm8a_         243 VQRLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAH  301 (346)
T ss_dssp             HHTCSCHHHHHHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred             HhhhcchhhhhhhccCCcccccchHHhccCCCHHHHHHHHHHCcCChhHCcCHHHHhcC
Confidence                      01111100000     011123457889999999999999999999985

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.3e-42  Score=367.39  Aligned_cols=266  Identities=23%  Similarity=0.253  Sum_probs=198.7

Q ss_pred             hCCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCC-chhHHHHHHHHHHhccCCCCCcceeeeeeeecc---CceE
Q 005257          363 TKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHEN-DGGTRAFLAEISSLGRLKHKSLVGLRGWCKREK---GSLM  438 (705)
Q Consensus       363 t~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~-~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~---~~~~  438 (705)
                      +.+|+..+.||+|+||+||+|++..+|+.||||+++... ....+.+.+|+.+|+.++||||+++++++....   ...+
T Consensus         7 ~~rY~~~~~LG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~Ei~il~~l~hp~iv~~~~~~~~~~~~~~~~~   86 (345)
T d1pmea_           7 GPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDV   86 (345)
T ss_dssp             CTTEEEEEECC---CCCEEEEEETTTCSEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCE
T ss_pred             CCCeEEEEEEeeccCeEEEEEEECCCCcEEEEEEEehhcChHHHHHHHHHHHHHHHcCCCCCCcEEEEEeeccccccceE
Confidence            356889999999999999999999999999999997553 344567899999999999999999999886432   1234


Q ss_pred             EEEeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceec
Q 005257          439 LVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMH  518 (705)
Q Consensus       439 lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~  518 (705)
                      ++++|+.+|+|.+++...    .+++.+++.++.|++.||+|||+   ++||||||||+|||++.++.+||+|||+++..
T Consensus        87 ~l~~~~~~g~L~~~l~~~----~l~~~~i~~i~~qil~al~yLH~---~~iiHRDIKp~NILl~~~~~~kl~DfG~a~~~  159 (345)
T d1pmea_          87 YLVTHLMGADLYKLLKTQ----HLSNDHICYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVA  159 (345)
T ss_dssp             EEEEECCCEEHHHHHHHC----CCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECCCTTCEEC
T ss_pred             EEEEeecCCchhhhhhcC----CCCHHHHHHHHHHHHHHHHHHHH---CCCcCCCCCcceEEECCCCCEEEcccCceeec
Confidence            455667799999999643    58999999999999999999999   99999999999999999999999999999876


Q ss_pred             CCCCcc--eeeeeeccccCCCcccccc-CCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchh-----
Q 005257          519 GHGQVA--STTRVVGTVGYLAPEVFSS-GRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLL-----  590 (705)
Q Consensus       519 ~~~~~~--~~~~~~gt~~y~APE~~~~-~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~-----  590 (705)
                      ......  .....+||+.|+|||++.. ..++.++||||+||++|||++|+.||.....................     
T Consensus       160 ~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~eml~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (345)
T d1pmea_         160 DPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNC  239 (345)
T ss_dssp             CGGGCBCCTTCCCCSCGGGCCGGGTTTBCSCSTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHT
T ss_pred             cCCCccceeeccccccceechHHHhhcCCCCCchhhhhccCceehHHhhCCCCCCCCCHHHHHHHHhhhccCCChhhhhh
Confidence            443221  2344679999999999854 56789999999999999999999999765432111111000000000     


Q ss_pred             ----HHHH--HhhhcCCCCCHH-----HHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 005257          591 ----DALD--ARLRAKGGFDED-----EVERVLHLGLLCAYPDPRARPTMRQVVKV  635 (705)
Q Consensus       591 ----~~id--~~l~~~~~~~~~-----~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  635 (705)
                          ....  .........+..     ....+.+++..|++.||++|||+.|++++
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~ta~e~L~h  295 (345)
T d1pmea_         240 IINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAH  295 (345)
T ss_dssp             CCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred             hhhhhhhcccccCCccCCCCHHHhCCCCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence                0000  001000111111     12457899999999999999999999985

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.5e-42  Score=359.04  Aligned_cols=284  Identities=24%  Similarity=0.311  Sum_probs=215.7

Q ss_pred             CCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCC--chhHHHHHHHHHHhccCCCCCcceeeeeeeeccCceEEEE
Q 005257          364 KGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHEN--DGGTRAFLAEISSLGRLKHKSLVGLRGWCKREKGSLMLVY  441 (705)
Q Consensus       364 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~--~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~~~~~~lV~  441 (705)
                      ++|+..+.||+|+||+||+|++..+++.||||+++...  ....+.+.+|+.+++.++||||+++++++.. ....++|+
T Consensus         2 ~ry~~i~~LG~G~fg~V~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~-~~~~~iv~   80 (292)
T d1unla_           2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHS-DKKLTLVF   80 (292)
T ss_dssp             CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEC-SSEEEEEE
T ss_pred             CCCEeeeEEecCcCeEEEEEEECCCCcEEEEEEEehhhCChHHHHHHHHHHHHHHhcCcCCEEeecccccc-ccceeEEe
Confidence            57889999999999999999999999999999986553  3446788999999999999999999999876 67889999


Q ss_pred             eeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccceecCCC
Q 005257          442 DYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARMHGHG  521 (705)
Q Consensus       442 E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~~~~~  521 (705)
                      |++.+++|..++....   .+++.++..++.|++.||+|||+   ++|+||||||+|||++.++.+||+|||.++.....
T Consensus        81 ~~~~~~~l~~~~~~~~---~~~~~~~~~~~~q~~~aL~~lH~---~~IvHrDiKP~NIli~~~~~~kl~DFG~a~~~~~~  154 (292)
T d1unla_          81 EFCDQDLKKYFDSCNG---DLDPEIVKSFLFQLLKGLGFCHS---RNVLHRDLKPQNLLINRNGELKLANFGLARAFGIP  154 (292)
T ss_dssp             ECCSEEHHHHHHHTTT---CCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTCCEEECCCTTCEECCSC
T ss_pred             eecccccccccccccc---ccchhHHHHHHHHHHHHHHHhhc---CCEeeecccCcccccccCCceeeeecchhhcccCC
Confidence            9999998888775433   68999999999999999999998   99999999999999999999999999999877544


Q ss_pred             CcceeeeeeccccCCCccccccCC-CCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCchhHHHHHhhhcC
Q 005257          522 QVASTTRVVGTVGYLAPEVFSSGR-ASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKLLDALDARLRAK  600 (705)
Q Consensus       522 ~~~~~~~~~gt~~y~APE~~~~~~-~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~~~~id~~l~~~  600 (705)
                      ... .....+++.|+|||.+.... ++.++||||+||++|||++|+.||..+... .+..                    
T Consensus       155 ~~~-~~~~~~~~~~~~pe~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~~~~~~-~~~~--------------------  212 (292)
T d1unla_         155 VRC-YSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDV-DDQL--------------------  212 (292)
T ss_dssp             CSC-CCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSH-HHHH--------------------
T ss_pred             Ccc-ceeeccccchhhhhHhccCCCCCchhhccccchHHHHHhhCCCCCCCCCCH-HHHH--------------------
Confidence            332 22346788999999987655 689999999999999999999998654321 1111                    


Q ss_pred             CCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHhc---cccCCCCCcchhhHHHHHHhhccccccccccccccCCC
Q 005257          601 GGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKVLEGK---IEAGIENETEDMDAYLLQQVKSKDMWANYSRSFGYGYA  677 (705)
Q Consensus       601 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~  677 (705)
                                 ..+......+.+...|...+....-...   ...............+.+++..+..++|..|.++.+++
T Consensus       213 -----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~sa~e~L  281 (292)
T d1unla_         213 -----------KRIFRLLGTPTEEQWPSMTKLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEAL  281 (292)
T ss_dssp             -----------HHHHHHHCCCCTTTCTTGGGSTTCCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHT
T ss_pred             -----------HHHHhhcCCCChhhhhhhhhcccccccccccccchhhhccccCCHHHHHHHHHHccCChhHCcCHHHHh
Confidence                       1111111222222222221111100000   00011112233445667788888899999999999999


Q ss_pred             CCCCcccccc
Q 005257          678 THPTFHDIRQ  687 (705)
Q Consensus       678 ~hp~f~~~~~  687 (705)
                      +||||.+...
T Consensus       282 ~Hp~f~~~~~  291 (292)
T d1unla_         282 QHPYFSDFCP  291 (292)
T ss_dssp             TSGGGSSCSC
T ss_pred             cChhhcCCCC
Confidence            9999987653

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.1e-42  Score=368.11  Aligned_cols=252  Identities=23%  Similarity=0.335  Sum_probs=204.1

Q ss_pred             CCCCcceEEeecCceEEEEEEE---cCCCeEEEEEEeccCC----chhHHHHHHHHHHhccCCC-CCcceeeeeeeeccC
Q 005257          364 KGFSEENVIGVGGNGKVYKGVL---EGGGAEIAVKRISHEN----DGGTRAFLAEISSLGRLKH-KSLVGLRGWCKREKG  435 (705)
Q Consensus       364 ~~f~~~~~LG~G~fg~Vy~~~~---~~~~~~vavK~i~~~~----~~~~~~~~~Ei~~l~~l~H-pniv~l~g~~~~~~~  435 (705)
                      ++|+..+.||+|+||+||+|..   +.+|+.||||+++...    ....+.+.+|++++++++| |||+++++++.. ..
T Consensus        24 ~~y~~~~~IG~G~fg~Vy~~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~~E~~il~~l~h~pnIv~~~~~~~~-~~  102 (322)
T d1vzoa_          24 ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQT-ET  102 (322)
T ss_dssp             GGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEE-TT
T ss_pred             hceEEEEEEecCCCeEEEEEEECccCCCCcEEEEEEEehHHhccchHHHHHHHHHHHHHHhccCCCeEEEeeeeecc-CC
Confidence            5689999999999999999987   4468999999986532    2335668899999999977 899999998876 67


Q ss_pred             ceEEEEeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccc
Q 005257          436 SLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLA  515 (705)
Q Consensus       436 ~~~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla  515 (705)
                      .++++|||+.+|+|.+++....   .+++..+..++.||+.||+|||+   ++|+||||||+|||++.++.+||+|||++
T Consensus       103 ~~~~v~e~~~~~~L~~~i~~~~---~~~e~~~~~~~~Qi~~al~~lH~---~~ivHrDiKp~Nill~~~~~vkL~DFG~a  176 (322)
T d1vzoa_         103 KLHLILDYINGGELFTHLSQRE---RFTEHEVQIYVGEIVLALEHLHK---LGIIYRDIKLENILLDSNGHVVLTDFGLS  176 (322)
T ss_dssp             EEEEEECCCCSCBHHHHHHHHS---CCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTSCEEESCSSEE
T ss_pred             ceeeeeecccccHHHHHHHhcc---cccHHHHHHHHHHHHHHHHHhhc---CCEEeccCCccceeecCCCCEEEeeccch
Confidence            8999999999999999997654   57889999999999999999998   99999999999999999999999999999


Q ss_pred             eecCCCCcceeeeeeccccCCCccccccC--CCCccccEEEEehhHHHHhhCCCCCCCCCc-cHHHHHHHHHHhCchhHH
Q 005257          516 RMHGHGQVASTTRVVGTVGYLAPEVFSSG--RASTQTDVFGFGILILEVLSGRRPIEEGKP-NLVEMVWELMVQGKLLDA  592 (705)
Q Consensus       516 ~~~~~~~~~~~~~~~gt~~y~APE~~~~~--~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~-~~~~~v~~~~~~~~~~~~  592 (705)
                      +..............|++.|+|||.+.+.  .++.++|||||||+||||++|+.||..... .....+....        
T Consensus       177 ~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~ksDIWSlG~iLyelltG~~PF~~~~~~~~~~~i~~~~--------  248 (322)
T d1vzoa_         177 KEFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRI--------  248 (322)
T ss_dssp             EECCGGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCCHHHHHHHH--------
T ss_pred             hhhcccccccccccccccccchhHHhhcCCcCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhc--------
Confidence            87755444444456899999999999764  468899999999999999999999976432 2111111111        


Q ss_pred             HHHhhhcCCCCCHHHHHHHHHHHHHcCCCCCCCCCC-----HHHHHH
Q 005257          593 LDARLRAKGGFDEDEVERVLHLGLLCAYPDPRARPT-----MRQVVK  634 (705)
Q Consensus       593 id~~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs-----~~evl~  634 (705)
                          ......++......+.+++..||++||++|||     ++|+++
T Consensus       249 ----~~~~~~~~~~~s~~~~~li~~~l~~dP~~R~s~~~~t~~eil~  291 (322)
T d1vzoa_         249 ----LKSEPPYPQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKE  291 (322)
T ss_dssp             ----HHCCCCCCTTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHT
T ss_pred             ----ccCCCCCcccCCHHHHHHHHHHcccCHHHcCCCCcccHHHHHc
Confidence                11112333455677899999999999999995     778765

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

Probab=100.00  E-value=1.9e-41  Score=359.82  Aligned_cols=257  Identities=20%  Similarity=0.276  Sum_probs=200.0

Q ss_pred             CCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCCchhHHHHHHHHHHhccCC-CCCcceeeeeeeec-cCceEEEE
Q 005257          364 KGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLK-HKSLVGLRGWCKRE-KGSLMLVY  441 (705)
Q Consensus       364 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~~~~~~~~~Ei~~l~~l~-Hpniv~l~g~~~~~-~~~~~lV~  441 (705)
                      ++|+..++||+|+||+||+|++..+++.||||+++..   ..+.+.+|+++|+.++ ||||+++++++... ...+++||
T Consensus        35 d~y~i~~~LG~G~fg~V~~a~~~~~~~~vAiK~i~~~---~~~~~~~Ei~il~~l~~hpnIv~~~~~~~~~~~~~~~~v~  111 (328)
T d3bqca1          35 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPV---KKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVF  111 (328)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSS---CHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCSEEEEE
T ss_pred             cCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEECHH---HHHHHHHHHHHHHhccCCCCCcEEEEEEEecCCCceeEEE
Confidence            5799999999999999999999999999999998643   3567889999999995 99999999988642 45689999


Q ss_pred             eeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCC-CeeeeeeccceecCC
Q 005257          442 DYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEM-NGRLGDFGLARMHGH  520 (705)
Q Consensus       442 E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~-~~kL~DFGla~~~~~  520 (705)
                      ||+++++|..+..      .+++.++..++.||+.||.|||+   ++|+||||||+|||++.++ .+||+|||+|+....
T Consensus       112 e~~~~~~L~~~~~------~l~e~~i~~i~~qil~aL~~LH~---~gIvHrDiKp~NILi~~~~~~vkl~DFG~a~~~~~  182 (328)
T d3bqca1         112 EHVNNTDFKQLYQ------TLTDYDIRFYMYEILKALDYCHS---MGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHP  182 (328)
T ss_dssp             ECCCSCBGGGTTT------SCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEEETTTTEEEECCGGGCEECCT
T ss_pred             eecCCCcHHHHhc------CCCHHHHHHHHHHHHHHHHHHhh---cccccccccccceEEcCCCCeeeecccccceeccC
Confidence            9999999977642      58999999999999999999999   9999999999999998655 589999999987755


Q ss_pred             CCcceeeeeeccccCCCccccccC-CCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHHhCch--hHHHHH--
Q 005257          521 GQVASTTRVVGTVGYLAPEVFSSG-RASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMVQGKL--LDALDA--  595 (705)
Q Consensus       521 ~~~~~~~~~~gt~~y~APE~~~~~-~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~~~~~--~~~id~--  595 (705)
                      ...  ....+||+.|+|||.+.+. .++.++||||+||+++||++|+.||.................|..  .+....  
T Consensus       183 ~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~~l~e~~~g~~pf~~~~~~~~~~~~i~~~~g~~~~~~~~~~~~  260 (328)
T d3bqca1         183 GQE--YNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYN  260 (328)
T ss_dssp             TCC--CCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTT
T ss_pred             CCc--ccccccCccccCcccccCCCCCCcccchhhhhhhhHHhccCCCCCCCCchhHHHHHHHHHHHCCchhhhhhhhcc
Confidence            432  2335789999999998765 479999999999999999999999987654322211111111100  000000  


Q ss_pred             -----hhh----c----------CCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHH
Q 005257          596 -----RLR----A----------KGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVK  634 (705)
Q Consensus       596 -----~l~----~----------~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~  634 (705)
                           ...    .          ...........+.+|+.+|++.||++|||++|+++
T Consensus       261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~e~L~  318 (328)
T d3bqca1         261 IELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAME  318 (328)
T ss_dssp             CCCCGGGGGTCCCCCCCCGGGGCCTTTGGGCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             cccCcccchhcccccccchhhcccccccccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence                 000    0          00000112356788999999999999999999987

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.8e-41  Score=363.89  Aligned_cols=259  Identities=21%  Similarity=0.257  Sum_probs=192.6

Q ss_pred             CCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCC--chhHHHHHHHHHHhccCCCCCcceeeeeeeec-----cCc
Q 005257          364 KGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHEN--DGGTRAFLAEISSLGRLKHKSLVGLRGWCKRE-----KGS  436 (705)
Q Consensus       364 ~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~--~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~-----~~~  436 (705)
                      ++|++.++||+|+||+||+|.+..+|+.||||++....  ....+.+.+|+.++++++||||+++++++...     ...
T Consensus        17 ~~Y~i~~~LG~G~fg~V~~~~d~~t~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~~~~~f~~~~~~~~~~~   96 (355)
T d2b1pa1          17 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQD   96 (355)
T ss_dssp             TTEEEEEECSCC--CEEEEEEETTTTEEEEEEEEESTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCCE
T ss_pred             CCeEEEEEeecCcCeEEEEEEECCCCCEEEEEEEChhhcCHHHHHHHHHHHHHHHhcCCCCeeEEEEEEecccccccCce
Confidence            67999999999999999999999999999999997653  34456789999999999999999999998632     357


Q ss_pred             eEEEEeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccce
Q 005257          437 LMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLAR  516 (705)
Q Consensus       437 ~~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~  516 (705)
                      +|+||||+.++.+ +.+.     ..+++.++..++.||+.||.|||+   ++|+||||||+|||++.++.+|++|||+++
T Consensus        97 ~~iv~Ey~~~~l~-~~~~-----~~~~~~~i~~~~~qil~gl~~LH~---~giiHrDlKP~Nil~~~~~~~kl~df~~~~  167 (355)
T d2b1pa1          97 VYLVMELMDANLC-QVIQ-----MELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLAR  167 (355)
T ss_dssp             EEEEEECCSEEHH-HHHT-----SCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTCCEEECCCCC--
T ss_pred             eEEEEeccchHHH-Hhhh-----cCCCHHHHHHHHHHHHHHHHHhhh---cccccccCCccccccccccceeeechhhhh
Confidence            8999999976544 4442     158999999999999999999999   999999999999999999999999999988


Q ss_pred             ecCCCCcceeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhhCCCCCCCCCccHHHHHHHHHH--hCchhH---
Q 005257          517 MHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPNLVEMVWELMV--QGKLLD---  591 (705)
Q Consensus       517 ~~~~~~~~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~~~v~~~~~--~~~~~~---  591 (705)
                      ......  .....+||+.|+|||++.+..++.++||||+||+++||++|+.||......  ........  .+...+   
T Consensus       168 ~~~~~~--~~~~~~~t~~y~aPE~l~~~~~~~~~DiwSlG~~l~ell~g~~pF~~~~~~--~~~~~i~~~~~~~~~~~~~  243 (355)
T d2b1pa1         168 TAGTSF--MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYI--DQWNKVIEQLGTPCPEFMK  243 (355)
T ss_dssp             ---------------CCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHHHHHHHCCCCHHHHT
T ss_pred             cccccc--ccccccccccccChhhhcCCCCCCCcccccccchHHHHhhCCCCCCCCCHH--HHHHHHHHhccCCCHHHHH
Confidence            765433  234457899999999999999999999999999999999999999765431  11111100  000000   


Q ss_pred             ----H----HHH---------------hhh-cCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 005257          592 ----A----LDA---------------RLR-AKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVVKV  635 (705)
Q Consensus       592 ----~----id~---------------~l~-~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  635 (705)
                          .    ...               ... ............+.+++.+|++.||++|||++|++++
T Consensus       244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~ta~elL~H  311 (355)
T d2b1pa1         244 KLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQH  311 (355)
T ss_dssp             TSCHHHHHHHHTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred             HhhhhHHHHhhcCccccccccccccccccccccccccccCCHHHHHHHHHHCcCChhHCcCHHHHhcC
Confidence                0    000               000 0000012345678899999999999999999999874

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=9e-41  Score=357.42  Aligned_cols=260  Identities=21%  Similarity=0.266  Sum_probs=196.9

Q ss_pred             hCCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCC--chhHHHHHHHHHHhccCCCCCcceeeeeeeec----cCc
Q 005257          363 TKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHEN--DGGTRAFLAEISSLGRLKHKSLVGLRGWCKRE----KGS  436 (705)
Q Consensus       363 t~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~--~~~~~~~~~Ei~~l~~l~Hpniv~l~g~~~~~----~~~  436 (705)
                      .++|+..++||+|+||+||+|++..+|+.||||+++...  ....+.+.+|+++|++++|||++++++++...    ...
T Consensus        17 ~~rY~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~h~~iv~~~~~~~~~~~~~~~~   96 (348)
T d2gfsa1          17 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFN   96 (348)
T ss_dssp             ETTEEEEEECGGGTTSSEEEEEETTTTEEEEEEECSCTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSTTTCC
T ss_pred             CCCeEEEEEEecCCCeEEEEEEECCCCCEEEEEEECchhcChHHHHHHHHHHHHHHhcCCCCeeeEEEEEeeccccccCc
Confidence            467999999999999999999999999999999997653  33456789999999999999999999987531    233


Q ss_pred             eEEEEeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCeeeeeeccce
Q 005257          437 LMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLAR  516 (705)
Q Consensus       437 ~~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~  516 (705)
                      .+++++|+.+|+|.+++..    ..+++.++..++.||+.||+|||+   ++|+||||||+|||++.++.+|++|||++.
T Consensus        97 ~~~i~~~~~gg~L~~~~~~----~~l~e~~~~~i~~qil~aL~~LH~---~giiHrDiKp~NILi~~~~~~kl~dfg~a~  169 (348)
T d2gfsa1          97 DVYLVTHLMGADLNNIVKC----QKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR  169 (348)
T ss_dssp             CCEEEEECCSEEHHHHHTT----CCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTCCEEECCC----
T ss_pred             eEEEEEeecCCchhhhccc----ccccHHHHHHHHHHHHHHHHHHHh---CCCcccccCCccccccccccccccccchhc
Confidence            4566777889999999853    259999999999999999999998   999999999999999999999999999997


Q ss_pred             ecCCCCcceeeeeeccccCCCccccccC-CCCccccEEEEehhHHHHhhCCCCCCCCCccHH-HHHHHHHHhCchhHHH-
Q 005257          517 MHGHGQVASTTRVVGTVGYLAPEVFSSG-RASTQTDVFGFGILILEVLSGRRPIEEGKPNLV-EMVWELMVQGKLLDAL-  593 (705)
Q Consensus       517 ~~~~~~~~~~~~~~gt~~y~APE~~~~~-~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~~~-~~v~~~~~~~~~~~~i-  593 (705)
                      .....    .....||+.|+|||.+.+. .++.++||||+||++|||++|+.||.+...... ..+...  .+.....+ 
T Consensus       170 ~~~~~----~~~~~g~~~y~apE~~~~~~~~~~~~DiwSlGv~l~~ll~g~~pF~~~~~~~~~~~i~~~--~~~~~~~~~  243 (348)
T d2gfsa1         170 HTDDE----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRL--VGTPGAELL  243 (348)
T ss_dssp             CCTGG----GSSSCHHHHTSCHHHHTTCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHH--HCCCCHHHH
T ss_pred             ccCcc----cccccccccccCchhhcCCccCCcccchhhhhHHHHHHHhCCCCCCCCCHHHHHHHHHHh--cCCCChHHh
Confidence            65322    2335789999999987665 468999999999999999999999986543211 111111  11110000 


Q ss_pred             -----------HHhhhcCCCCCH-----HHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 005257          594 -----------DARLRAKGGFDE-----DEVERVLHLGLLCAYPDPRARPTMRQVVKV  635 (705)
Q Consensus       594 -----------d~~l~~~~~~~~-----~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~  635 (705)
                                 ...+........     .....+.+++.+|++.||++|||+.|++++
T Consensus       244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~elL~H  301 (348)
T d2gfsa1         244 KKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH  301 (348)
T ss_dssp             TTCCCHHHHHHHTTSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred             hhccchhhhhhhhhcccCCCcchhhhcCCCCHHHHHHHHHHCcCChhhCcCHHHHhcC
Confidence                       000000001110     122457889999999999999999999983

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=3.9e-37  Score=330.61  Aligned_cols=264  Identities=20%  Similarity=0.219  Sum_probs=194.8

Q ss_pred             CCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCCchhHHHHHHHHHHhccCC-----------CCCcceeeeeeeec
Q 005257          365 GFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLK-----------HKSLVGLRGWCKRE  433 (705)
Q Consensus       365 ~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~~~~~~~~~Ei~~l~~l~-----------Hpniv~l~g~~~~~  433 (705)
                      +|+..++||+|+||+||+|++..+|+.||||+++... ...+.+.+|++++++++           |+||+++++++...
T Consensus        14 rY~i~~~LG~G~fg~Vy~~~~~~~g~~vAvKvi~~~~-~~~~~~~~Ei~~l~~l~~~~~~~~~~~~~~~iv~~~~~~~~~   92 (362)
T d1q8ya_          14 RYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDK-VYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNHK   92 (362)
T ss_dssp             TEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEEE
T ss_pred             cEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeccc-cchHHHHHHHHHHHHhcchhhhhhhhcCcCceEEEEEEeeec
Confidence            5889999999999999999999999999999996542 33467788998888875           57899999887542


Q ss_pred             -cCceEEEEeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCC------
Q 005257          434 -KGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMN------  506 (705)
Q Consensus       434 -~~~~~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~------  506 (705)
                       ....+++++++..+..............+++..+..++.||+.||.|||+  ..+|+||||||+|||++.++.      
T Consensus        93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~qil~al~~lh~--~~~IvHrDlKp~NIll~~~~~~~~~~~  170 (362)
T d1q8ya_          93 GPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHR--RCGIIHTDIKPENVLMEIVDSPENLIQ  170 (362)
T ss_dssp             ETTEEEEEEEECCCCEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHH--TTCEECSCCSGGGEEEEEEETTTTEEE
T ss_pred             cccceeeeeeecccccccccccccccccCCcHHHHHHHHHHHHHHHHHHhh--hcCcccccCChhHeeeeccCcccccce
Confidence             34566777777655544443333344478999999999999999999996  478999999999999986654      


Q ss_pred             eeeeeeccceecCCCCcceeeeeeccccCCCccccccCCCCccccEEEEehhHHHHhhCCCCCCCCCcc----HHHHHHH
Q 005257          507 GRLGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFGILILEVLSGRRPIEEGKPN----LVEMVWE  582 (705)
Q Consensus       507 ~kL~DFGla~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~Gvvl~ElltG~~Pf~~~~~~----~~~~v~~  582 (705)
                      +|++|||.+.......    ...+||+.|+|||++....++.++||||+||+++||++|+.||......    ..+....
T Consensus       171 ~kl~dfg~s~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~g~~pF~~~~~~~~~~~~~~~~~  246 (362)
T d1q8ya_         171 IKIADLGNACWYDEHY----TNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQ  246 (362)
T ss_dssp             EEECCCTTCEETTBCC----CSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CHHHHHHH
T ss_pred             eeEeeccccccccccc----ccccccccccChhhccccCCCccccccchHHHHHHHHHCCCCCCCCccccccchhHHHHH
Confidence            8999999998654322    3357999999999999999999999999999999999999999753221    1111111


Q ss_pred             H-HHhCchhHHH----------------------------HHhhhcCCCCCHHHHHHHHHHHHHcCCCCCCCCCCHHHHH
Q 005257          583 L-MVQGKLLDAL----------------------------DARLRAKGGFDEDEVERVLHLGLLCAYPDPRARPTMRQVV  633 (705)
Q Consensus       583 ~-~~~~~~~~~i----------------------------d~~l~~~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl  633 (705)
                      . ..-|......                            ...+.............+.+++..|+..||.+|||++|++
T Consensus       247 ~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~Rpta~e~L  326 (362)
T d1q8ya_         247 IIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLV  326 (362)
T ss_dssp             HHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCHHHHH
T ss_pred             HHHHhCCCCHHHhhcccccccccccchhhhccccccCCchhhhcccccccCcccCHHHHHHHHHHCCCChhHCcCHHHHh
Confidence            1 0111111100                            0111112334566778889999999999999999999987


Q ss_pred             HH
Q 005257          634 KV  635 (705)
Q Consensus       634 ~~  635 (705)
                      ++
T Consensus       327 ~H  328 (362)
T d1q8ya_         327 NH  328 (362)
T ss_dssp             TC
T ss_pred             cC
Confidence            74

>d1nlsa_ b.29.1.1 (A:) Concanavalin A {Jack bean (Canavalia ensiformis) [TaxId: 3823]}

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Concanavalin A
species: Jack bean (Canavalia ensiformis) [TaxId: 3823]

Probab=99.95  E-value=8.6e-29  Score=244.80  Aligned_cols=113  Identities=28%  Similarity=0.487  Sum_probs=101.9

Q ss_pred             CCcEEEEEeecccCCCCCCCCCCeeEEecCCCcccccccccccCCCCCCCCCCCCCCCCCCCccccceeecCCCcceEEE
Q 005257          134 SNHVFGVEFDVFKNQEFNDIDENHVGIDVNSLTSVSAHAAGYWPDNQTDSSGSNSNSGTGDDEKSFKELKLNNGKNYQVW  213 (705)
Q Consensus       134 ~~~~vaVEFDt~~n~~~~d~~~~Hvgidvns~~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~  213 (705)
                      .|++|||||||++|.+++||++||||||+|++.|.++.                             .+++.+|+.++||
T Consensus         1 an~ivAVEFDT~~N~~~~Dp~~nHIgIdvns~~S~~~~-----------------------------~~~l~~G~~~~v~   51 (237)
T d1nlsa_           1 ADTIVAVELDTYPNTDIGDPSYPHIGIDIKSVRSKKTA-----------------------------KWNMQNGKVGTAH   51 (237)
T ss_dssp             CCCEEEEEEECSCCGGGTCCSSCEEEEEESSSSCSEEE-----------------------------ECCCCTTCEEEEE
T ss_pred             CCCEEEEEEECCcCCCCCCCCCCEEEEEeCCCCcccee-----------------------------cccccCCCEEEEE
Confidence            37999999999999999999999999999999987663                             4478899999999


Q ss_pred             EEe--cCceEEEEEEEccCCCCCCCceeeeecCccccccceecccccccccccccceeeeeeecccc
Q 005257          214 IDY--ADSFINITMVEAGMKRPKRPLLSVPLNLSGVLEDEMYVGFTAATGQLVESHKILAWSFSNTK  278 (705)
Q Consensus       214 I~Y--~~~~~~v~~~~~~~~~~~~~~ls~~vdl~~~l~~~~~vGfsastg~~~~~h~i~~wsf~~~~  278 (705)
                      |+|  ..++|+|++...   +|..|++++.|||+.+|+++||||||||||...+.|+|++|+|+++.
T Consensus        52 I~Yd~~~~~L~V~~~~~---~~~~~~ls~~vdL~~~l~~~vyvGFSAsTG~~~~~h~I~sWsFsS~~  115 (237)
T d1nlsa_          52 IIYNSVDKRLSAVVSYP---NADSATVSYDVDLDNVLPEWVRVGLSASTGLYKETNTILSWSFTSKL  115 (237)
T ss_dssp             EEEETTTTEEEEEEECT---TSCCEEEEEECCGGGTSCSEEEEEEEEECSSSCCCCEEEEEEEEEEE
T ss_pred             EEEecCCcEEEEEEecC---CCCCeEEEEEEChHHhCCCcEEEEEEeecCCCccceEEEEEEEEeec
Confidence            999  677888888643   56778999999999999999999999999999999999999999875

>d1gv9a_ b.29.1.13 (A:) Carbohydrate-recognition domain of P58/ERGIC-53 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Lectin leg-like
domain: Carbohydrate-recognition domain of P58/ERGIC-53
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.94  E-value=3.6e-27  Score=235.99  Aligned_cols=201  Identities=15%  Similarity=0.142  Sum_probs=144.0

Q ss_pred             CCeEEEcceEeecCcEEecCCCCCeEEEEEcCCCccccCCCCCcccceEEEEEEEEecCCCCCCCCceEEEEeeCCCCCC
Q 005257           36 SNLSLYGTATVESRILTLTNSTTFTIGRALYPSKIPTKRPNSSYVYPFSTSFIFAMAPYKGVLAGHGLVFLFVPFHGIKG  115 (705)
Q Consensus        36 ~~~~~~g~a~~~~~~l~lt~~~~~~~Gr~~y~~pv~l~~~~~~~~~sF~t~F~f~i~~~~~~~~g~G~aF~~~~~~~~~~  115 (705)
                      .+|.+.|+|.+.++.||||++..+++|+++|++|+++        .+|+|+|+|.|...+ ..+||||||+|+|+..   
T Consensus        24 ~~w~~~G~a~i~~~~i~LT~~~~~~~G~v~~~~p~~~--------~~F~~~f~f~~~~~~-~~ggdG~aF~i~~~~~---   91 (228)
T d1gv9a_          24 PFWAHAGNAIPSADQIRIAPSLKSQRGSVWTKTKAAF--------ENWEVEVTFRVTGRG-RIGADGLAIWYTENQG---   91 (228)
T ss_dssp             TTEEEEETCEECSSCEEEECSSTTCEEEEEESSCBCC--------SSEEEEEEEEEECSS-SCCCCEEEEEEESSCC---
T ss_pred             cceEEeeeEEEECCEEEECCCCCCCEEEEEeCCCccc--------cCcEEEEEEeccCCC-CCCCCEEEEEEecCCC---
Confidence            5789999999999999999999999999999999988        369999999997643 4589999999998642   


Q ss_pred             CCCCCcccccccCCCCCCCCcEEEEEeecccCCCCCCCCCCeeEEecCCCcccc-cccccccCCCCCCCCCCCCCCCCCC
Q 005257          116 ATEAQHLGLFNRTNDGNSSNHVFGVEFDVFKNQEFNDIDENHVGIDVNSLTSVS-AHAAGYWPDNQTDSSGSNSNSGTGD  194 (705)
Q Consensus       116 ~~~g~~lGl~~~~~~~~~~~~~vaVEFDt~~n~~~~d~~~~Hvgidvns~~S~~-~~~~~~~~~~~~~~~~~~~~~~~~~  194 (705)
                       ..|+.+|..       ...+.+||||||+.|.  ++++.+|+.+++|...... ..+.++...       ..++.    
T Consensus        92 -~~g~~~G~~-------~~~~glaVefDt~~n~--~~~~~~~~~~~~n~~~~~~~~~~~~~~~~-------~~~~~----  150 (228)
T d1gv9a_          92 -LDGPVFGSA-------DMWNGVGIFFDSFDND--GKKNNPAIVVVGNNGQINYDHQNDGATQA-------LASCQ----  150 (228)
T ss_dssp             -CEEEETTEC-------SCCEEEEEEEECCCC-------CCEEEEEEEESCCCCCHHHHHHHHC-------SEEEC----
T ss_pred             -CCCCccCcC-------CCCceEEEEEEccccc--CCCCCCcEEEEecCCcceeeecCCCcccc-------cccee----
Confidence             456667662       3346799999999997  6888888888877543111 110000000       00000    


Q ss_pred             CccccceeecCCCcceEEEEEecCceEEEEEEEccCCCCCCCceeeeecCccccccceecccccccccccccceeeeeee
Q 005257          195 DEKSFKELKLNNGKNYQVWIDYADSFINITMVEAGMKRPKRPLLSVPLNLSGVLEDEMYVGFTAATGQLVESHKILAWSF  274 (705)
Q Consensus       195 ~~~~~~~~~l~~g~~~~~~I~Y~~~~~~v~~~~~~~~~~~~~~ls~~vdl~~~l~~~~~vGfsastg~~~~~h~i~~wsf  274 (705)
                            .....++..+++|++|....++|++..........+.....++ ...+|+++|||||||||...+.|.|++|.+
T Consensus       151 ------~~~~~~~~~~~i~~~~~~~~l~v~i~~~~~~~~~~~~~~~~~~-~~~l~~~~y~GFTAsTG~~~~~H~I~s~~~  223 (228)
T d1gv9a_         151 ------RDFRNKPYPVRAKITYYQKTLTVMINNGFTPDKNDYEFCAKVE-NMVIPTQGHFGISAATGGLADDHDVLSFLT  223 (228)
T ss_dssp             ------CCCBSCSSCEEEEEEEETTEEEEEEECSSCCCTTCCEEEEEET-TCCCCSSBEEEEEEECCSSCCEEEEEEEEE
T ss_pred             ------eeecCCceEEEEEEEecCCEEEEEEeccccCCCcceeEEEEec-ccccCCCEEEEEEEeCCCCcCeEEEEEEEE
Confidence                  0012345678899999999999999866554444444443333 556899999999999999999999999987


Q ss_pred             cc
Q 005257          275 SN  276 (705)
Q Consensus       275 ~~  276 (705)
                      .+
T Consensus       224 ~~  225 (228)
T d1gv9a_         224 FQ  225 (228)
T ss_dssp             EE
T ss_pred             EE
Confidence            53

>d1nlsa_ b.29.1.1 (A:) Concanavalin A {Jack bean (Canavalia ensiformis) [TaxId: 3823]}

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Concanavalin A
species: Jack bean (Canavalia ensiformis) [TaxId: 3823]

Probab=99.90  E-value=2.6e-24  Score=212.49  Aligned_cols=104  Identities=28%  Similarity=0.467  Sum_probs=91.9

Q ss_pred             CceeeEEeCCCC--CCCeEEEcceEee-cCcEEecCCC------CCeEEEEEcCCCccccCCCCCcccceEEEEEEEEec
Q 005257           23 ISAVDFVFNGFN--SSNLSLYGTATVE-SRILTLTNST------TFTIGRALYPSKIPTKRPNSSYVYPFSTSFIFAMAP   93 (705)
Q Consensus        23 ~~~~~f~f~~f~--~~~~~~~g~a~~~-~~~l~lt~~~------~~~~Gr~~y~~pv~l~~~~~~~~~sF~t~F~f~i~~   93 (705)
                      +.+++|+|++|+  .+||+|+|||++. +|.||||+.+      ..++|||+|++||||||+ +++++||+|+|+|.|.+
T Consensus       123 sn~~~F~f~~F~~~~~nl~l~G~A~i~~~G~l~LT~~~~~~~~~~~s~Gra~y~~Pv~l~d~-t~~~~SFsT~F~F~I~~  201 (237)
T d1nlsa_         123 TNALHFMFNQFSKDQKDLILQGDATTGTDGNLELTRVSSNGSPQGSSVGRALFYAPVHIWES-SAVVASFEATFTFLIKS  201 (237)
T ss_dssp             EEEEEEEESCCCTTCTTEEEEETCEEEETTEEESSCBCTTSCBCSSCEEEEEESSCEECCCT-TEEEEEEEEEEEEECCC
T ss_pred             cccceEEeeecCCCCCCEEEeeeeEecCCCcEEecCCCCCCcccCcceEEEEeCCCEEEECC-CCcEeeEEEEEEEEEec
Confidence            357999999996  4799999999996 7899999854      458999999999999996 88999999999999987


Q ss_pred             CCCCCCCCceEEEEeeC-CCCCCCCCCCcccccccC
Q 005257           94 YKGVLAGHGLVFLFVPF-HGIKGATEAQHLGLFNRT  128 (705)
Q Consensus        94 ~~~~~~g~G~aF~~~~~-~~~~~~~~g~~lGl~~~~  128 (705)
                      .+ ..+||||||||+|. ..+|.++.|+||||||.+
T Consensus       202 ~~-~~~gdG~aF~iap~~~~~p~~~~g~~LGL~n~~  236 (237)
T d1nlsa_         202 PD-SHPADGIAFFISNIDSSIPSGSTGRLLGLFPDA  236 (237)
T ss_dssp             SS-SSCCCEEEEEEECTTCCCCTTCCGGGTTTCSSC
T ss_pred             CC-CCCCCCEEEEEeCCCCCCCCCCCCCeeeeccCC
Confidence            65 45799999999996 457889999999999975

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=99.82  E-value=1.8e-20  Score=181.43  Aligned_cols=166  Identities=19%  Similarity=0.188  Sum_probs=118.0

Q ss_pred             CcceEEeecCceEEEEEEEcCCCeEEEEEEeccCCc------------------hhHHHHHHHHHHhccCCCCCcceeee
Q 005257          367 SEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHEND------------------GGTRAFLAEISSLGRLKHKSLVGLRG  428 (705)
Q Consensus       367 ~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~------------------~~~~~~~~Ei~~l~~l~Hpniv~l~g  428 (705)
                      ...++||+|+||+||+|.+. +|+.||||+++....                  .......+|...+.++.|++++..++
T Consensus         3 ~vg~~IG~G~~g~Vy~a~~~-~g~~vAvKi~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~v~~~~~   81 (191)
T d1zara2           3 AIGKLMGEGKESAVFNCYSE-KFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQGLAVPKVYA   81 (191)
T ss_dssp             EEEEEEEECSSEEEEEEEET-TTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTTTSSSCCEEE
T ss_pred             hhCCEeeeCcceEEEEEECC-CCCEEEEEEEecccchhhhhhhhhhhccHHHHHHHHHHHHHHHHHHHHccCCCcceEEE
Confidence            45789999999999999986 588999998753210                  01223456888999999999988776


Q ss_pred             eeeeccCceEEEEeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeEEccCCCee
Q 005257          429 WCKREKGSLMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEGWEKKVLHRDIKSSNVLLDKEMNGR  508 (705)
Q Consensus       429 ~~~~~~~~~~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~~~~iiHrDLkp~NILld~~~~~k  508 (705)
                      +.   .  .+++|||+++..+..          ++......++.|++.+|.|||+   ++|+||||||+|||++++ .++
T Consensus        82 ~~---~--~~lvme~~~~~~~~~----------l~~~~~~~i~~ql~~~l~~lH~---~giiHrDiKP~NILv~~~-~~~  142 (191)
T d1zara2          82 WE---G--NAVLMELIDAKELYR----------VRVENPDEVLDMILEEVAKFYH---RGIVHGDLSQYNVLVSEE-GIW  142 (191)
T ss_dssp             EE---T--TEEEEECCCCEEGGG----------CCCSCHHHHHHHHHHHHHHHHH---TTEECSCCSTTSEEEETT-EEE
T ss_pred             ec---C--CEEEEEeeccccccc----------hhhHHHHHHHHHHHHHHHHHhh---CCEEEccCChhheeeeCC-CEE
Confidence            42   2  279999998765532          3445567899999999999998   999999999999999865 589


Q ss_pred             eeeeccceecCCCCcceeeeeeccccCCCccccccCCCCccccEEEEe
Q 005257          509 LGDFGLARMHGHGQVASTTRVVGTVGYLAPEVFSSGRASTQTDVFGFG  556 (705)
Q Consensus       509 L~DFGla~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~s~ksDVwS~G  556 (705)
                      |+|||+|....+........  ..... -.|.+ ..+|+.++|+||..
T Consensus       143 liDFG~a~~~~~~~~~~~l~--rd~~~-~~~~f-~r~y~~~~d~~s~~  186 (191)
T d1zara2         143 IIDFPQSVEVGEEGWREILE--RDVRN-IITYF-SRTYRTEKDINSAI  186 (191)
T ss_dssp             ECCCTTCEETTSTTHHHHHH--HHHHH-HHHHH-HHHHCCCCCHHHHH
T ss_pred             EEECCCcccCCCCCcHHHHH--HHHHH-HHHHH-cCCCCCcccHHHHH
Confidence            99999998765443211000  00000 00111 34678888999853

>d2a6za1 b.29.1.13 (A:7-227) Emp47p N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Lectin leg-like
domain: Emp47p N-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.82  E-value=1.6e-19  Score=178.45  Aligned_cols=194  Identities=12%  Similarity=0.109  Sum_probs=124.8

Q ss_pred             EEeCCCC---C--CCeEEEcceEeecCcEEecCCCCCeEEEEEcCCCccccCCCCCcccceEEEEEEEEecCCCCCCCCc
Q 005257           28 FVFNGFN---S--SNLSLYGTATVESRILTLTNSTTFTIGRALYPSKIPTKRPNSSYVYPFSTSFIFAMAPYKGVLAGHG  102 (705)
Q Consensus        28 f~f~~f~---~--~~~~~~g~a~~~~~~l~lt~~~~~~~Gr~~y~~pv~l~~~~~~~~~sF~t~F~f~i~~~~~~~~g~G  102 (705)
                      |+++.+-   .  .+|.+.|+|.+.++.|+||++ .++.|.++++.||++++.       |+++|.|+|.... ..+|||
T Consensus        10 ~s~p~~~~~~~~~~~W~~~g~a~~~~~~i~LTp~-~~~~G~~w~~~~i~~~~~-------f~~~~~F~i~g~~-~~ggdG   80 (221)
T d2a6za1          10 YSLPDLINTRKVPNNWQTGEQASLEEGRIVLTSN-QNSKGSLWLKQGFDLKDS-------FTMEWTFRSVGYS-GQTDGG   80 (221)
T ss_dssp             GCBCCCTTCCSCCTTEEEEETCEEETTEEESCCS-TTCEEEEEESSCEECCSC-------EEEEEEEEEESCC-SCCSCE
T ss_pred             ccCCCccccccCCCccEEcceeEEECCEEEECCC-CCCceEEEECCccccCCC-------eEEEEEEEEeCCC-CCCCCc
Confidence            6666652   2  689999999999999999997 578899999999999764       9999999998753 457999


Q ss_pred             eEEEEeeCCCCCCCCCCCcccccccCCCCCCCCcEEEEEeecccCCCCCCCCCCeeEEecCCCcccccccccccCCCCCC
Q 005257          103 LVFLFVPFHGIKGATEAQHLGLFNRTNDGNSSNHVFGVEFDVFKNQEFNDIDENHVGIDVNSLTSVSAHAAGYWPDNQTD  182 (705)
Q Consensus       103 ~aF~~~~~~~~~~~~~g~~lGl~~~~~~~~~~~~~vaVEFDt~~n~~~~d~~~~Hvgidvns~~S~~~~~~~~~~~~~~~  182 (705)
                      |||++++....  ...|+++|..       .....+||||||+.|.    ....|+.++.++......... .       
T Consensus        81 ~af~~~~~~~~--~~~g~~~G~~-------~~~~GlaV~fDt~~n~----~~~~~~~~ndgt~~~~~~~~~-~-------  139 (221)
T d2a6za1          81 ISFWFVQDSNI--PRDKQLYNGP-------VNYDGLQLLVDNNGPL----GPTLRGQLNDGQKPVDKTKIY-D-------  139 (221)
T ss_dssp             EEEEEEECSSS--CCCCTBTTBC-------TTCEEEEEEEESCSTT----SSEEEEEEEESSSCCCGGGHH-H-------
T ss_pred             EEEEEEcCCCc--cccccccccC-------CCCceEEEEEECCCCC----CCceEEEecCCCccccccCCc-c-------
Confidence            99999986432  2345556652       2346799999999873    122333444333221111000 0       


Q ss_pred             CCCCCCCCCCCCCccccceee-cCCCcceEEEEEec---CceEEEEEEEccCCCCCCCceeeeecCccccccceeccccc
Q 005257          183 SSGSNSNSGTGDDEKSFKELK-LNNGKNYQVWIDYA---DSFINITMVEAGMKRPKRPLLSVPLNLSGVLEDEMYVGFTA  258 (705)
Q Consensus       183 ~~~~~~~~~~~~~~~~~~~~~-l~~g~~~~~~I~Y~---~~~~~v~~~~~~~~~~~~~~ls~~vdl~~~l~~~~~vGfsa  258 (705)
                       ....+|           .+. ..++.+.+++|+|.   ...+.|.+  .+.     ..+  .++--.+-++++|+||||
T Consensus       140 -~~~~~~-----------~~~~~~~~~~~~~~I~y~~~~~~~l~v~i--d~~-----~c~--~~~~v~lp~~~~~fG~SA  198 (221)
T d2a6za1         140 -QSFASC-----------LMGYQDSSVPSTIRVTYDLEDDNLLKVQV--DNK-----VCF--QTRKVRFPSGSYRIGVTA  198 (221)
T ss_dssp             -HCSEEE-----------ECCCTTEEEEEEEEEEEEGGGTSEEEEEE--TTE-----EEE--EESCCCCCSSEEEEEEEE
T ss_pred             -ccccee-----------eecccCCCCCEEEEEEEecCccceEEEEe--cCc-----EeE--EECCeecCCCCEEEEEEE
Confidence             000111           112 23566788999993   33355554  221     011  122222225678999999


Q ss_pred             ccccccccceeeee
Q 005257          259 ATGQLVESHKILAW  272 (705)
Q Consensus       259 stg~~~~~h~i~~w  272 (705)
                      +||...+.|.+..+
T Consensus       199 ~TG~~~~~hd~~~i  212 (221)
T d2a6za1         199 QNGAVNNNAESFEI  212 (221)
T ss_dssp             ECCSGGGCCCEEEE
T ss_pred             ccCCccCCCceEEE
Confidence            99999998887665

>d2a6va1 b.29.1.13 (A:9-226) Emp46p N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Lectin leg-like
domain: Emp46p N-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.80  E-value=3.8e-19  Score=175.10  Aligned_cols=191  Identities=14%  Similarity=0.072  Sum_probs=126.5

Q ss_pred             CCeEEEcceEeecCcEEecCCCCCeEEEEEcCCCccccCCCCCcccceEEEEEEEEecCCCCCCCCceEEEEeeCCCCCC
Q 005257           36 SNLSLYGTATVESRILTLTNSTTFTIGRALYPSKIPTKRPNSSYVYPFSTSFIFAMAPYKGVLAGHGLVFLFVPFHGIKG  115 (705)
Q Consensus        36 ~~~~~~g~a~~~~~~l~lt~~~~~~~Gr~~y~~pv~l~~~~~~~~~sF~t~F~f~i~~~~~~~~g~G~aF~~~~~~~~~~  115 (705)
                      .+|.+.|+|.+.++.|+||++ .++.|++|++.||++++.       |+++|+|.|.... ..+||||||++.+......
T Consensus        22 ~~W~~~G~~~~~~~~i~LTp~-~~~~G~~w~~~~i~~~~~-------f~i~~~F~i~g~~-~~~~dG~afw~~~~~~~~~   92 (218)
T d2a6va1          22 SQWTLGDKVKLEEGRFVLTPG-KNTKGSLWLKPEYSIKDA-------MTIEWTFRSFGFR-GSTKGGLAFWLKQGNEGDS   92 (218)
T ss_dssp             TTEEEEETCEEETTEEESCCS-TTCEEEEEESSCBCCSSC-------EEEEEEEEEESCC-SCCSCEEEEEEECSCCCCC
T ss_pred             CccEECCCEEEECCEEEECCC-CCCeeEEEeCCccccccc-------ceEEEEEEEeCCC-CCCCCcEEEEEEcCCcccC
Confidence            789999999999999999998 567899999999999864       9999999998653 4579999999997543211


Q ss_pred             CCCCCcccccccCCCCCCCCcEEEEEeecccCCCCCCCCCCeeEEecCCCcccccccccccCCCCCCCCCCCCCCCCCCC
Q 005257          116 ATEAQHLGLFNRTNDGNSSNHVFGVEFDVFKNQEFNDIDENHVGIDVNSLTSVSAHAAGYWPDNQTDSSGSNSNSGTGDD  195 (705)
Q Consensus       116 ~~~g~~lGl~~~~~~~~~~~~~vaVEFDt~~n~~~~d~~~~Hvgidvns~~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~  195 (705)
                        .|+..|..+       ...-+||||||+.|.      .+||.+.+|.-+    .+   +....  +...++|...+  
T Consensus        93 --~~~~~G~~~-------~f~GlaV~fDt~~n~------~~~i~~~~ndGs----~~---~~~~~--d~~~g~c~~~~--  146 (218)
T d2a6va1          93 --TELFGGSSK-------KFNGLMILLRLDDKL------GESVTAYLNDGT----KD---LDIES--SPYFASCLFQY--  146 (218)
T ss_dssp             --CTBTTTBCS-------SCEEEEEEEEEETTT------EEEEEEEEEESS----SC---CCTTT--SCCSEEEECCC--
T ss_pred             --CCcccccCC-------CcceEEEEEECCCCC------CCeEEEEeCCCC----cc---ccccC--CcccceEEecc--
Confidence              122222211       123589999999874      368888766421    11   10000  00111221111  


Q ss_pred             ccccceeecCCCcceEEEEEecC---ceEEEEEEEccCCCCCCCceeeeecCccccccceecccccccccccccceeeee
Q 005257          196 EKSFKELKLNNGKNYQVWIDYAD---SFINITMVEAGMKRPKRPLLSVPLNLSGVLEDEMYVGFTAATGQLVESHKILAW  272 (705)
Q Consensus       196 ~~~~~~~~l~~g~~~~~~I~Y~~---~~~~v~~~~~~~~~~~~~~ls~~vdl~~~l~~~~~vGfsastg~~~~~h~i~~w  272 (705)
                              ..++.+.++.|.|..   ..+.|.+  .+.    ..+-...|+|  ..++++|+||||+||...+.|.|++|
T Consensus       147 --------~~~~~~~~~~i~Y~~~~~~~l~v~i--d~~----~c~~t~~i~l--p~~~~~yfG~SA~Tg~~~d~~dIls~  210 (218)
T d2a6va1         147 --------QDSMVPSTLRLTYNPLDNHLLKLQM--DNR----VCFQTRKVKF--MGSSPFRIGTSAINDASKESFEILKM  210 (218)
T ss_dssp             --------SSCSSCEEEEEEEEGGGTSEEEEEE--TTE----EEEEESCCCG--GGTSCBEEEEEEECCTTCCEEEEEEE
T ss_pred             --------cCCCCcEEEEEEEECcccceEEEEe--CCc----EEEEECCeec--CCCCcEEEEEEECCCCCcCcEEEEEE
Confidence                    235678899999932   2344444  221    1112223444  34567999999999999999999999


Q ss_pred             eeccc
Q 005257          273 SFSNT  277 (705)
Q Consensus       273 sf~~~  277 (705)
                      ++.+.
T Consensus       211 ~~~~~  215 (218)
T d2a6va1         211 KLYDG  215 (218)
T ss_dssp             EEESS
T ss_pred             EEEec
Confidence            98653

>d1j7la_ d.144.1.6 (A:) Type IIIa 3',5"-aminoglycoside phosphotransferase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Type IIIa 3',5"-aminoglycoside phosphotransferase
species: Enterococcus faecalis [TaxId: 1351]

Probab=98.19  E-value=2.2e-06  Score=84.59  Aligned_cols=149  Identities=15%  Similarity=0.080  Sum_probs=94.7

Q ss_pred             HHHHHhCCCCcceEEeecCceEEEEEEEcCCCeEEEEEEeccCCchhHHHHHHHHHHhccCC-CCCcceeeeeeeeccCc
Q 005257          358 EIEAATKGFSEENVIGVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLK-HKSLVGLRGWCKREKGS  436 (705)
Q Consensus       358 el~~at~~f~~~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~~~~~~~~~~~Ei~~l~~l~-Hpniv~l~g~~~~~~~~  436 (705)
                      |+...-..|+..+..+-++.+.||+...  ++..+++|+...........+.+|...+..+. +-.+.+++.++.. ++.
T Consensus         8 ~l~~~~~~~~~~~~~~G~s~~~v~rv~~--~~~~~vlk~~~~~~~~~~~~~~~E~~~l~~l~~~vpvP~vl~~~~~-~~~   84 (263)
T d1j7la_           8 ELKKLIEKYRCVKDTEGMSPAKVYKLVG--ENENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERH-DGW   84 (263)
T ss_dssp             HHHHHHTTSEEEECSCCCSSSEEEEEEC--SSCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEE-TTE
T ss_pred             HHHHhhhceEEEEcCCCCCCCcEEEEEe--CCCeEEEEEcCCCcccchhhHHHHHHHHHHHhccCCCCcEEEEEec-CCc
Confidence            4444445555444433333468998764  35668899886554444456778888877774 3334556666554 567


Q ss_pred             eEEEEeeCCCCChhHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHhcC--------------------------------
Q 005257          437 LMLVYDYMENGSLDKWIFQCDGSMMLSCEERIRVLKDVAAGVLYLHEG--------------------------------  484 (705)
Q Consensus       437 ~~lV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~--------------------------------  484 (705)
                      .++||+++++.++......        ......++.++++.|..||+.                                
T Consensus        85 ~~lv~~~l~G~~~~~~~~~--------~~~~~~~~~~l~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (263)
T d1j7la_          85 SNLLMSEADGVLCSEEYED--------EQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCE  156 (263)
T ss_dssp             EEEEEECCSSEEHHHHTTT--------CSCHHHHHHHHHHHHHHHHTSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCCGG
T ss_pred             eEEEEEecccccccccccc--------cccHHHHHHHHHHHHHHHhccCccccccCcchhhhhhhHHHHHHHHhhhhhhh
Confidence            8999999999887654321        111223444555555555521                                


Q ss_pred             ------------------------CCCCeeecCCCCCCeEEccCCCeeeeeecccee
Q 005257          485 ------------------------WEKKVLHRDIKSSNVLLDKEMNGRLGDFGLARM  517 (705)
Q Consensus       485 ------------------------~~~~iiHrDLkp~NILld~~~~~kL~DFGla~~  517 (705)
                                              ....++|+|+.|.|||+++++..-|.||+.+..
T Consensus       157 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDwe~a~~  213 (263)
T d1j7la_         157 NWEEDTPFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSGR  213 (263)
T ss_dssp             GGSTTCSCSSHHHHHHHHHHSCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCEE
T ss_pred             cccccccchHHHHHHHHHHhcCCcCCcEEEEeeccCcceeecCCceEEEeechhccc
Confidence                                    012489999999999999776667999998763

>d1nd4a_ d.144.1.6 (A:) Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) {Bacteria (Klebsiella pneumoniae) [TaxId: 573]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase)
species: Bacteria (Klebsiella pneumoniae) [TaxId: 573]

Probab=97.29  E-value=0.00045  Score=66.91  Aligned_cols=75  Identities=15%  Similarity=0.104  Sum_probs=49.1

Q ss_pred             EEeecCc-eEEEEEEEcCCCeEEEEEEeccCCchhHHHHHHHHHHhccCCCCC--cceeeeeeeeccCceEEEEeeCCCC
Q 005257          371 VIGVGGN-GKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKS--LVGLRGWCKREKGSLMLVYDYMENG  447 (705)
Q Consensus       371 ~LG~G~f-g~Vy~~~~~~~~~~vavK~i~~~~~~~~~~~~~Ei~~l~~l~Hpn--iv~l~g~~~~~~~~~~lV~E~~~~g  447 (705)
                      .+..|.. +.||+.... ++..+++|.......   ..+..|...++.|....  +.+++.++.. .+..++||++++|-
T Consensus        17 ~~~~G~s~~~v~r~~~~-~~~~~vlK~~~~~~~---~~l~~E~~~l~~L~~~gvpvP~v~~~~~~-~~~~~~v~~~i~G~   91 (255)
T d1nd4a_          17 QQTIGCSDAAVFRLSAQ-GRPVLFVKTDLSGAL---NELQDEAARLSWLATTGVPCAAVLDVVTE-AGRDWLLLGEVPGQ   91 (255)
T ss_dssp             ECSCTTSSCEEEEEECT-TSCCEEEEEECSCTT---SCHHHHHHHHHHHHTTTCCBCCEEEEEEC-SSCEEEEEECCSSE
T ss_pred             EcCCcccCCeEEEEEeC-CCCEEEEEeCCccCH---hHHHHHHHHHHHHHhcCCCCCceeeeccc-ccceEEEEEeeecc
Confidence            4555554 578988875 356688887654332   34567777777774333  4456666554 56789999999886


Q ss_pred             Chh
Q 005257          448 SLD  450 (705)
Q Consensus       448 sL~  450 (705)
                      ++.
T Consensus        92 ~~~   94 (255)
T d1nd4a_          92 DLL   94 (255)
T ss_dssp             ETT
T ss_pred             ccc
Confidence            653

>d2pula1 d.144.1.6 (A:5-396) Methylthioribose kinase MtnK {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Methylthioribose kinase MtnK
species: Bacillus subtilis [TaxId: 1423]

Probab=97.24  E-value=0.00058  Score=71.18  Aligned_cols=77  Identities=14%  Similarity=-0.045  Sum_probs=46.9

Q ss_pred             ceEEeecCceEEEEEEEcCCCeEEEEEEeccC-------CchhHHHHHHHHHHhccCC-C-C-CcceeeeeeeeccCceE
Q 005257          369 ENVIGVGGNGKVYKGVLEGGGAEIAVKRISHE-------NDGGTRAFLAEISSLGRLK-H-K-SLVGLRGWCKREKGSLM  438 (705)
Q Consensus       369 ~~~LG~G~fg~Vy~~~~~~~~~~vavK~i~~~-------~~~~~~~~~~Ei~~l~~l~-H-p-niv~l~g~~~~~~~~~~  438 (705)
                      .+.||.|....||+.....+++.++||.-...       ..........|.+.|+.+. + | .+.+++.+.   ....+
T Consensus        31 ~~eig~G~~N~vfrV~~~~~~~svivKqa~p~~r~~g~~~~~~~~R~~~E~~~L~~~~~~~p~~vP~v~~~d---~~~~~  107 (392)
T d2pula1          31 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYSD---TEMAV  107 (392)
T ss_dssp             EEECCSSSSEEEEEEEC----CEEEEEEECCGGGC--CCCCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEEE---TTTTE
T ss_pred             EEEeCCCceEeEEEEEeCCCCeEEEEecCCchhcccCCCCCCCHHHHHHHHHHHHHhhhhCCCCcceEEEEc---CCCCE
Confidence            45689999999999998877888999964321       1112233456777777662 2 3 344455432   33457


Q ss_pred             EEEeeCCCCC
Q 005257          439 LVYDYMENGS  448 (705)
Q Consensus       439 lV~E~~~~gs  448 (705)
                      +|||++++..
T Consensus       108 lvmE~L~~~~  117 (392)
T d2pula1         108 TVMEDLSHLK  117 (392)
T ss_dssp             EEECCCTTSE
T ss_pred             EEEeccCCcc
Confidence            8999997654

>d1zyla1 d.144.1.6 (A:4-328) RdoA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: RdoA
species: Escherichia coli [TaxId: 562]

Probab=95.89  E-value=0.0063  Score=61.19  Aligned_cols=137  Identities=18%  Similarity=0.166  Sum_probs=76.4

Q ss_pred             ceEEEEEEEcCCCeEEEEEEeccCCchhHHHHHHHHHHhccCCCCCc-----ceeee-eeeeccCceEEEEeeCCCCChh
Q 005257          377 NGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSL-----VGLRG-WCKREKGSLMLVYDYMENGSLD  450 (705)
Q Consensus       377 fg~Vy~~~~~~~~~~vavK~i~~~~~~~~~~~~~Ei~~l~~l~Hpni-----v~l~g-~~~~~~~~~~lV~E~~~~gsL~  450 (705)
                      --.||++... +|..+++|+.+.. ....+++..|+..+..|....+     +..-+ .....++..+.++++++|..+.
T Consensus        35 EN~vy~v~~~-dg~~~VlK~~rp~-~~s~~~i~~E~~~l~~L~~~gipv~~p~~~~g~~~~~~~~~~~~l~~~~~G~~~~  112 (325)
T d1zyla1          35 ENRVYQFQDE-DRRRFVVKFYRPE-RWTADQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNHQGFYFAVFPSVGGRQFE  112 (325)
T ss_dssp             SSEEEEECCT-TCCCEEEEEECTT-TSCHHHHHHHHHHHHHHHHTTCSBCCCCCBTTBSCEEETTEEEEEEECCCCEECC
T ss_pred             cceeEEEEcC-CCCEEEEEEeCCC-CCCHHHHHHHHHHHHHHHhcCCCCCCceecCCCeeeeeeeEEEEEEeecCCcCCC
Confidence            4589999885 4778999987543 2235667788888888753322     11111 1112255678899999764332


Q ss_pred             H----H----------HHh----c--CCCCcccHH----------------------HHHHHHHHHHHHHHHH-hcCCCC
Q 005257          451 K----W----------IFQ----C--DGSMMLSCE----------------------ERIRVLKDVAAGVLYL-HEGWEK  487 (705)
Q Consensus       451 ~----~----------L~~----~--~~~~~l~~~----------------------~~~~i~~qia~gL~yL-H~~~~~  487 (705)
                      .    .          ++.    .  ..+..+.+.                      .....+.++...+.-+ .+....
T Consensus       113 ~~~~~~~~~lG~~LA~lH~~~~~~~~~~r~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~p~  192 (325)
T d1zyla1         113 ADNIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLFEDATLIPSGLKAAFLKATDELIAAVTAHWREDFTV  192 (325)
T ss_dssp             SSCHHHHHHHHHHHHHHHHHHTSSCCSSSCBCSHHHHTHHHHHHHHTCSSSCTTTHHHHHHHHHHHHHHHHHHCCSCSCC
T ss_pred             CCCHHHHHHHHHHHHHHHhhcccCCccccCCCCHHHHhhhhHHHHHHcCcCCHHHHHHHHHHHHHHHHHHHHhccccCCc
Confidence            0    0          111    0  001111111                      1112223333332222 222346


Q ss_pred             CeeecCCCCCCeEEccCCCeeeeeecccee
Q 005257          488 KVLHRDIKSSNVLLDKEMNGRLGDFGLARM  517 (705)
Q Consensus       488 ~iiHrDLkp~NILld~~~~~kL~DFGla~~  517 (705)
                      ++||+|+.+.|||++++  ..+.||+-+..
T Consensus       193 ~liHgDlh~~NvL~~~~--~~~IDFdd~~~  220 (325)
T d1zyla1         193 LRLHGDCHAGNILWRDG--PMFVDLDDARN  220 (325)
T ss_dssp             EECCSSCSGGGEEESSS--EEECCCTTCCE
T ss_pred             eeecCCCCcccEEEeCC--ceEEechhccc
Confidence            79999999999999754  45889998763

>d1nw1a_ d.144.1.8 (A:) Choline kinase {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Choline kinase
domain: Choline kinase
species: Caenorhabditis elegans [TaxId: 6239]

Probab=95.30  E-value=0.02  Score=58.91  Aligned_cols=74  Identities=15%  Similarity=0.132  Sum_probs=49.0

Q ss_pred             ceEEeecCceEEEEEEEcC-------CCeEEEEEEeccCCchhHHHHHHHHHHhccCCCCCcc-eeeeeeeeccCceEEE
Q 005257          369 ENVIGVGGNGKVYKGVLEG-------GGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSLV-GLRGWCKREKGSLMLV  440 (705)
Q Consensus       369 ~~~LG~G~fg~Vy~~~~~~-------~~~~vavK~i~~~~~~~~~~~~~Ei~~l~~l~Hpniv-~l~g~~~~~~~~~~lV  440 (705)
                      .+.|+-|-.-.+|+.....       .++.|.+++.. ... ......+|..+++.+.-.++. ++++++.  +   .+|
T Consensus        47 v~~l~GGltN~~y~v~~~~~~~~~~~~~~~vllRi~g-~~~-~~idr~~E~~i~~~ls~~gl~Pkll~~~~--~---g~I  119 (395)
T d1nw1a_          47 ISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYF-NPE-TESHLVAESVIFTLLSERHLGPKLYGIFS--G---GRL  119 (395)
T ss_dssp             EEEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEEC-SCC-CHHHHHHHHHHHHHHHHTTSSSCEEEEET--T---EEE
T ss_pred             EEEcCCccccceEEEEeCCCCccccCCCCcEEEEecC-Ccc-hhhHHHHHHHHHHHHHhCCCCCeEEEEcC--C---ceE
Confidence            4568888889999998753       23556666654 222 234456899998888544554 5666553  2   589


Q ss_pred             EeeCCCCCh
Q 005257          441 YDYMENGSL  449 (705)
Q Consensus       441 ~E~~~~gsL  449 (705)
                      +||+++..|
T Consensus       120 ~efi~g~~l  128 (395)
T d1nw1a_         120 EEYIPSRPL  128 (395)
T ss_dssp             ECCCCEEEC
T ss_pred             EEEeccccC
Confidence            999987544

>d2ppqa1 d.144.1.6 (A:5-320) Homoserine kinase ThrB {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Homoserine kinase ThrB
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=94.62  E-value=0.12  Score=50.78  Aligned_cols=159  Identities=13%  Similarity=0.084  Sum_probs=83.8

Q ss_pred             cCHHHHHHHhCCCCcceEE-----eecCceEEEEEEEcCCCeEEEEEEeccCCchhHHHHHHHHHHhccCCCCCc-----
Q 005257          354 ITYQEIEAATKGFSEENVI-----GVGGNGKVYKGVLEGGGAEIAVKRISHENDGGTRAFLAEISSLGRLKHKSL-----  423 (705)
Q Consensus       354 ~~~~el~~at~~f~~~~~L-----G~G~fg~Vy~~~~~~~~~~vavK~i~~~~~~~~~~~~~Ei~~l~~l~Hpni-----  423 (705)
                      ++-+|++....+|...+..     ..|---+.|+....+ | .+++|+.....  ..++...|++++..|...++     
T Consensus         3 ls~~el~~~l~~Y~lg~~~~~~~i~~G~~N~ny~v~t~~-g-~yVLri~~~~~--~~~~l~~~~~~l~~L~~~g~pvp~p   78 (316)
T d2ppqa1           3 ITEDELRNFLTQYDVGSLTSYKGIAEGVENSNFLLHTTK-D-PLILTLYEKRV--EKNDLPFFLGLMQHLAAKGLSCPLP   78 (316)
T ss_dssp             CCHHHHHHHHTTBCCCCEEEEEEECC---EEEEEEEESS-C-CEEEEEECC-----CCHHHHHHHHHHHHHHTTCCCCCB
T ss_pred             CCHHHHHHHHHhCCCCCceEeecCCCCcccCeEEEEECC-C-cEEEEEcCCCC--CHHHHHHHHHHHHhhhhcccccccc
Confidence            4567787777888765443     355567889988753 4 48999875431  22345556777777743322     


Q ss_pred             ceee-e-eeeeccCceEEEEeeCCCCChhH--------------HHHhcCC----C---Cc-----------------cc
Q 005257          424 VGLR-G-WCKREKGSLMLVYDYMENGSLDK--------------WIFQCDG----S---MM-----------------LS  463 (705)
Q Consensus       424 v~l~-g-~~~~~~~~~~lV~E~~~~gsL~~--------------~L~~~~~----~---~~-----------------l~  463 (705)
                      +... | .....++....++.+..+.....              .++....    .   ..                 ..
T Consensus        79 i~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (316)
T d2ppqa1          79 LPRKDGELLGELSGRPAALISFLEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADEV  158 (316)
T ss_dssp             CCBTTCCSCEEETTEEEEEEECCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGGT
T ss_pred             ceecCCCcceeeecccceeeeecccccccccchhHHHHHHHHHHhhhhhhhhcccccccccchhhcchhhhHHHHhhhhc
Confidence            1110 1 11111345566777776543211              0110000    0   00                 00


Q ss_pred             HHHHHHHHHHHHHHHHHHh-cCCCCCeeecCCCCCCeEEccCCCeeeeeeccce
Q 005257          464 CEERIRVLKDVAAGVLYLH-EGWEKKVLHRDIKSSNVLLDKEMNGRLGDFGLAR  516 (705)
Q Consensus       464 ~~~~~~i~~qia~gL~yLH-~~~~~~iiHrDLkp~NILld~~~~~kL~DFGla~  516 (705)
                      .......+......+.-.+ .....++||+|+.+.||+++.+...-|.||+.+.
T Consensus       159 ~~~~~~~l~~~~~~~~~~~~~~L~~giIHgDl~~dNvl~~~~~v~gvIDF~~~~  212 (316)
T d2ppqa1         159 EKGLREEIRPEIDYLAAHWPKDLPAGVIHADLFQDNVFFLGDELSGLIDFYFAC  212 (316)
T ss_dssp             STTHHHHHHHHHHHHHHHCCCSSCEEEECSCCCGGGEEEETTEEEEECCCTTCE
T ss_pred             chhHHHHHHHHHHhhhccCccccccccccCCcchhhhhcccccceeEecccccc
Confidence            0111122222222222222 2235789999999999999988767899999875

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

Probab=82.24  E-value=0.17  Score=50.10  Aligned_cols=37  Identities=16%  Similarity=0.140  Sum_probs=32.4

Q ss_pred             hhHHHHHHhhccccccccccccccCCCCCCCcccccc
Q 005257          651 MDAYLLQQVKSKDMWANYSRSFGYGYATHPTFHDIRQ  687 (705)
Q Consensus       651 ~~~~~~~~~~~~~~~~~~~r~~~~~~~~hp~f~~~~~  687 (705)
                      ....+.++++.+..++|..|.++.++++||||.++.+
T Consensus       291 ~s~~~~dli~~mL~~dP~~R~ta~e~L~Hp~F~~v~~  327 (328)
T d3bqca1         291 VSPEALDFLDKLLRYDHQSRLTAREAMEHPYFYTVVK  327 (328)
T ss_dssp             CCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTTSCC
T ss_pred             CCHHHHHHHHHHccCChhHCcCHHHHhcCcccCCCCC
Confidence            4456778899999999999999999999999998764

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

Probab=80.72  E-value=0.22  Score=48.09  Aligned_cols=27  Identities=11%  Similarity=-0.049  Sum_probs=23.6

Q ss_pred             HHHHHHHHHcCCCCCCCCCCHHHHHHH
Q 005257          609 ERVLHLGLLCAYPDPRARPTMRQVVKV  635 (705)
Q Consensus       609 ~~l~~l~~~Cl~~dP~~RPs~~evl~~  635 (705)
                      ..+.+++.+|++.||.+|||++|++++
T Consensus       257 ~~~~dll~~mL~~dP~~R~sa~e~L~H  283 (292)
T d1unla_         257 ATGRDLLQNLLKCNPVQRISAEEALQH  283 (292)
T ss_dssp             HHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred             HHHHHHHHHHccCChhHCcCHHHHhcC
Confidence            456788999999999999999999873