Query 005260
Match_columns 705
No_of_seqs 332 out of 2518
Neff 7.4
Searched_HMMs 29240
Date Mon Mar 25 20:12:30 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/005260.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/005260hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3fed_A Glutamate carboxypeptid 100.0 1E-128 3E-133 1123.3 58.8 660 24-704 9-707 (707)
2 3kas_A Transferrin receptor pr 100.0 4E-112 1E-116 976.0 55.4 614 27-704 5-633 (640)
3 2ek8_A Aminopeptidase; metallo 100.0 5.1E-57 1.7E-61 501.2 41.2 398 30-555 6-414 (421)
4 3iib_A Peptidase M28; YP_92679 100.0 1.2E-52 4.3E-57 468.2 38.1 403 29-545 10-435 (444)
5 4f9u_A CG32412; alpha/beta hyd 100.0 4.1E-33 1.4E-37 297.2 18.3 219 320-554 62-311 (312)
6 4fai_A CG5976, isoform B; alph 100.0 9.8E-31 3.3E-35 280.6 23.2 210 321-543 90-327 (330)
7 4fuu_A Leucine aminopeptidase; 100.0 4.1E-29 1.4E-33 265.9 18.0 188 323-539 81-307 (309)
8 2afw_A Glutaminyl-peptide cycl 100.0 1.9E-27 6.4E-32 255.2 20.2 205 322-540 86-326 (329)
9 3pb6_X Glutaminyl-peptide cycl 100.0 2.6E-27 8.7E-32 252.9 20.9 205 321-539 93-326 (330)
10 1tkj_A Aminopeptidase, SGAP; d 99.9 9.7E-27 3.3E-31 244.7 19.8 197 323-547 63-282 (284)
11 3tc8_A Leucine aminopeptidase; 99.9 5E-27 1.7E-31 249.3 17.4 189 322-539 80-308 (309)
12 3gux_A Putative Zn-dependent e 99.9 8.4E-27 2.9E-31 247.7 15.9 189 322-539 82-312 (314)
13 1rtq_A Bacterial leucyl aminop 99.9 3.2E-26 1.1E-30 242.4 20.3 202 322-547 73-293 (299)
14 3k9t_A Putative peptidase; str 99.9 1.1E-22 3.8E-27 217.8 17.3 194 311-543 154-356 (435)
15 4h2k_A Succinyl-diaminopimelat 99.3 5.6E-11 1.9E-15 123.4 19.2 182 324-542 51-268 (269)
16 3t68_A Succinyl-diaminopimelat 99.3 1.1E-10 3.8E-15 121.1 17.6 181 324-541 51-267 (268)
17 1y0y_A FRV operon protein FRVX 99.1 3E-10 1E-14 122.5 13.2 148 354-543 180-351 (353)
18 2wyr_A Cobalt-activated peptid 99.1 2.2E-10 7.6E-15 122.4 11.3 144 354-539 171-331 (332)
19 1vhe_A Aminopeptidase/glucanas 99.1 9.5E-10 3.2E-14 119.5 14.1 148 354-541 182-353 (373)
20 2fvg_A Endoglucanase; TM1049, 99.1 1.5E-10 5.1E-15 124.2 7.5 147 354-542 165-335 (340)
21 2gre_A Deblocking aminopeptida 99.0 1.6E-09 5.6E-14 116.6 14.9 129 354-513 184-327 (349)
22 3icu_A E3 ubiquitin-protein li 98.8 2.8E-08 9.7E-13 97.0 12.1 106 134-286 61-175 (194)
23 1q7l_A Aminoacylase-1; catalys 98.6 8.2E-08 2.8E-12 94.8 10.3 82 324-408 58-163 (198)
24 3n5f_A L-carbamoylase, N-carba 98.5 2.2E-07 7.6E-12 101.9 9.7 80 324-406 57-142 (408)
25 3kl9_A PEPA, glutamyl aminopep 98.5 5.6E-07 1.9E-11 96.8 12.1 148 353-540 179-344 (355)
26 1ylo_A Hypothetical protein SF 98.4 2.3E-06 7.8E-11 91.6 14.3 148 354-541 167-337 (348)
27 1vho_A Endoglucanase; structur 98.3 1.6E-06 5.5E-11 92.8 10.5 150 355-543 171-337 (346)
28 1cg2_A Carboxypeptidase G2; me 98.3 2.5E-06 8.5E-11 92.9 11.2 79 325-408 71-168 (393)
29 2pok_A Peptidase, M20/M25/M40 98.3 2.6E-06 8.9E-11 95.4 11.0 96 324-423 92-210 (481)
30 2zog_A Cytosolic non-specific 98.2 3.8E-06 1.3E-10 93.9 10.9 95 325-423 83-200 (479)
31 3ct9_A Acetylornithine deacety 98.2 2.1E-06 7E-11 92.4 8.4 79 324-407 52-152 (356)
32 3dlj_A Beta-Ala-His dipeptidas 98.2 5.9E-06 2E-10 92.7 11.3 95 325-423 90-207 (485)
33 1z2l_A Allantoate amidohydrola 98.1 2.3E-06 7.9E-11 94.1 6.5 78 325-405 62-145 (423)
34 3cpx_A Aminopeptidase, M42 fam 98.1 7.9E-06 2.7E-10 86.7 9.6 144 354-539 163-320 (321)
35 2vpu_A TET3, 354AA long hypoth 98.1 3.1E-05 1.1E-09 83.1 14.1 153 353-545 182-352 (354)
36 2v8h_A Beta-alanine synthase; 98.1 8E-06 2.7E-10 91.3 9.7 78 324-405 92-175 (474)
37 3pfo_A Putative acetylornithin 98.0 6E-06 2.1E-10 90.9 8.2 80 323-406 89-191 (433)
38 3gb0_A Peptidase T; NP_980509. 98.0 5.7E-06 2E-10 89.3 6.3 77 324-404 56-152 (373)
39 2rb7_A Peptidase, M20/M25/M40 97.9 1.3E-05 4.6E-10 86.3 7.7 90 325-423 51-164 (364)
40 3tx8_A Succinyl-diaminopimelat 97.9 2.9E-05 9.8E-10 83.6 9.4 78 325-408 58-153 (369)
41 3ife_A Peptidase T; metallopep 97.9 1E-05 3.4E-10 89.4 5.6 77 324-404 80-210 (434)
42 3rza_A Tripeptidase; phosphory 97.8 1.3E-05 4.5E-10 87.3 5.5 78 324-405 74-174 (396)
43 3pfe_A Succinyl-diaminopimelat 97.8 6.4E-05 2.2E-09 83.9 10.5 92 324-422 77-191 (472)
44 1vgy_A Succinyl-diaminopimelat 97.7 0.00016 5.5E-09 78.5 12.9 79 324-408 51-153 (393)
45 1xmb_A IAA-amino acid hydrolas 97.7 0.00012 4.2E-09 80.2 10.7 78 324-407 71-164 (418)
46 3khx_A Putative dipeptidase sa 97.7 7.6E-05 2.6E-09 83.8 9.1 79 325-408 87-187 (492)
47 1lfw_A PEPV; hydrolase, dipept 97.6 0.00015 5E-09 80.7 10.2 77 325-407 69-167 (470)
48 1fno_A Peptidase T; metallo pe 97.6 6.3E-05 2.1E-09 82.4 6.6 77 324-405 55-184 (417)
49 3isz_A Succinyl-diaminopimelat 97.5 0.00027 9.2E-09 75.8 10.0 79 323-407 47-149 (377)
50 3isx_A Endoglucanase; TM1050, 97.5 0.00034 1.2E-08 74.6 10.5 127 353-513 177-326 (343)
51 1ysj_A Protein YXEP; M20 famil 97.5 0.00021 7.2E-09 78.0 8.9 78 324-406 76-169 (404)
52 2f7v_A Aectylcitrulline deacet 97.3 0.00022 7.5E-09 76.8 7.0 69 324-407 58-148 (369)
53 3mru_A Aminoacyl-histidine dip 97.3 0.00013 4.6E-09 81.7 4.9 89 324-424 56-175 (490)
54 3ram_A HMRA protein; two-domai 97.3 0.00047 1.6E-08 75.0 8.8 78 324-406 61-143 (394)
55 2qyv_A XAA-His dipeptidase; YP 97.2 0.00013 4.6E-09 81.6 3.0 76 324-406 53-159 (487)
56 3io1_A Aminobenzoyl-glutamate 97.1 0.0008 2.7E-08 74.4 8.5 77 325-406 97-196 (445)
57 4fuu_A Leucine aminopeptidase; 96.8 0.0018 6.2E-08 68.0 7.9 51 38-88 21-72 (309)
58 2wzn_A TET3, 354AA long hypoth 96.1 0.054 1.8E-06 55.7 13.8 59 478-547 295-354 (354)
59 3i6s_A Subtilisin-like proteas 95.7 0.013 4.3E-07 67.8 7.4 88 142-286 256-346 (649)
60 3tc8_A Leucine aminopeptidase; 95.5 0.021 7.1E-07 59.9 7.3 53 33-87 18-71 (309)
61 3gux_A Putative Zn-dependent e 95.5 0.024 8.1E-07 59.6 7.7 50 38-87 23-73 (314)
62 1xf1_A C5A peptidase, SCP; hyd 95.5 0.023 7.8E-07 68.5 8.4 55 143-203 260-314 (926)
63 2glf_A Probable M18-family ami 95.2 0.039 1.3E-06 60.7 8.7 138 353-515 246-434 (450)
64 4fai_A CG5976, isoform B; alph 95.2 0.05 1.7E-06 57.5 9.2 53 33-88 31-83 (330)
65 4f9u_A CG32412; alpha/beta hyd 95.0 0.037 1.3E-06 57.9 7.4 48 40-88 9-56 (312)
66 3pb6_X Glutaminyl-peptide cycl 94.2 0.067 2.3E-06 56.5 7.1 58 28-88 27-87 (330)
67 1y9z_A Alkaline serine proteas 94.0 0.089 3E-06 57.8 7.8 39 165-203 269-312 (441)
68 2afw_A Glutaminyl-peptide cycl 92.1 0.17 6E-06 53.2 6.2 56 29-87 20-78 (329)
69 1y7e_A Probable M18-family ami 91.8 0.031 1.1E-06 61.7 0.1 141 353-514 252-442 (458)
70 3vat_A Dnpep, aspartyl aminope 91.7 0.17 5.7E-06 56.2 5.7 143 353-514 282-469 (496)
71 2ijz_A Probable M18-family ami 91.6 0.11 3.6E-06 57.0 3.9 140 350-513 229-407 (428)
72 2glj_A Probable M18-family ami 91.3 0.18 6.3E-06 55.6 5.5 140 353-514 258-445 (461)
73 1tkj_A Aminopeptidase, SGAP; d 90.2 0.53 1.8E-05 48.3 7.6 49 38-86 3-57 (284)
74 1rtq_A Bacterial leucyl aminop 86.7 1.1 3.6E-05 46.3 7.1 47 31-79 11-58 (299)
75 1q7l_A Aminoacylase-1; catalys 82.3 1.3 4.4E-05 42.7 5.0 48 38-85 6-53 (198)
76 3n5f_A L-carbamoylase, N-carba 70.4 4.1 0.00014 43.7 5.3 47 39-85 2-56 (408)
77 3gb0_A Peptidase T; NP_980509. 65.7 8.1 0.00028 40.6 6.4 46 38-85 2-47 (373)
78 1cg2_A Carboxypeptidase G2; me 64.7 20 0.00068 37.9 9.3 46 40-85 17-63 (393)
79 3mru_A Aminoacyl-histidine dip 56.2 7.1 0.00024 43.1 3.9 54 38-93 10-64 (490)
80 3ife_A Peptidase T; metallopep 54.2 12 0.0004 40.4 5.2 54 41-94 26-89 (434)
81 2v8h_A Beta-alanine synthase; 52.0 14 0.00047 40.5 5.3 46 39-84 29-90 (474)
82 1q7l_B Aminoacylase-1; catalys 50.7 30 0.001 28.1 6.1 60 474-544 22-82 (88)
83 2zog_A Cytosolic non-specific 49.1 27 0.00092 37.9 7.2 46 40-85 18-67 (479)
84 3rza_A Tripeptidase; phosphory 48.1 16 0.00053 38.8 4.9 46 38-85 20-65 (396)
85 2qyv_A XAA-His dipeptidase; YP 47.2 17 0.00059 39.7 5.2 45 38-84 7-51 (487)
86 3fx7_A Putative uncharacterize 46.7 33 0.0011 28.9 5.5 79 545-633 6-89 (94)
87 1lfw_A PEPV; hydrolase, dipept 44.5 24 0.00081 38.3 5.8 44 40-83 12-65 (470)
88 3vta_A Cucumisin; subtilisin-l 43.1 28 0.00094 39.6 6.2 35 165-202 277-311 (621)
89 3pfo_A Putative acetylornithin 43.1 20 0.00069 38.3 4.9 40 42-83 26-65 (433)
90 3t68_A Succinyl-diaminopimelat 42.5 17 0.00057 36.4 3.8 45 39-85 3-47 (268)
91 1z2l_A Allantoate amidohydrola 42.1 26 0.00089 37.3 5.5 45 40-84 7-59 (423)
92 3dlj_A Beta-Ala-His dipeptidas 41.2 43 0.0015 36.5 7.2 45 40-84 23-73 (485)
93 2rb7_A Peptidase, M20/M25/M40 39.0 37 0.0013 35.4 6.0 45 41-85 5-50 (364)
94 1xmb_A IAA-amino acid hydrolas 38.1 42 0.0014 35.8 6.4 50 42-93 28-79 (418)
95 3ct9_A Acetylornithine deacety 37.3 41 0.0014 35.0 6.0 41 42-84 11-51 (356)
96 3c8o_A Regulator of ribonuclea 37.2 1.2E+02 0.004 28.1 8.4 66 134-201 23-94 (162)
97 1q5x_A Regulator of RNAse E ac 36.7 1E+02 0.0035 28.4 7.9 66 134-201 23-94 (161)
98 2pok_A Peptidase, M20/M25/M40 36.3 40 0.0014 36.7 5.9 45 41-85 42-88 (481)
99 1fno_A Peptidase T; metallo pe 35.7 24 0.00081 37.6 3.9 51 43-93 3-63 (417)
100 3isx_A Endoglucanase; TM1050, 35.1 17 0.00057 38.2 2.5 42 43-86 12-53 (343)
101 1vi4_A Regulator of ribonuclea 34.0 1.2E+02 0.004 28.5 7.9 66 134-201 26-97 (174)
102 3ram_A HMRA protein; two-domai 34.0 44 0.0015 35.3 5.7 42 41-84 15-56 (394)
103 1ysj_A Protein YXEP; M20 famil 33.9 31 0.0011 36.6 4.5 41 42-84 32-72 (404)
104 3kl9_A PEPA, glutamyl aminopep 32.9 27 0.00093 36.8 3.7 49 43-93 4-53 (355)
105 2gre_A Deblocking aminopeptida 31.8 30 0.001 36.1 3.8 44 39-84 3-46 (349)
106 1j3l_A Demethylmenaquinone met 30.3 1.7E+02 0.0059 27.0 8.4 66 134-201 22-93 (164)
107 1vgy_A Succinyl-diaminopimelat 30.2 31 0.0011 36.3 3.7 43 39-83 3-45 (393)
108 1vhe_A Aminopeptidase/glucanas 29.4 39 0.0013 35.5 4.2 43 40-84 5-47 (373)
109 4h2k_A Succinyl-diaminopimelat 29.2 37 0.0013 33.8 3.8 40 43-84 7-46 (269)
110 1nxj_A Probable S-adenosylmeth 27.3 1.3E+02 0.0045 28.4 7.1 66 134-201 52-123 (183)
111 2wzn_A TET3, 354AA long hypoth 26.6 42 0.0014 33.4 3.7 40 46-86 13-52 (354)
112 3isz_A Succinyl-diaminopimelat 26.0 47 0.0016 34.4 4.1 40 42-83 3-42 (377)
113 3noj_A 4-carboxy-4-hydroxy-2-o 25.6 2.1E+02 0.0072 28.1 8.5 66 135-201 49-120 (238)
114 2pcn_A S-adenosylmethionine:2- 25.4 1.4E+02 0.0048 27.5 6.7 66 134-201 21-92 (161)
115 2vpu_A TET3, 354AA long hypoth 23.6 32 0.0011 36.2 2.1 50 43-93 10-60 (354)
116 2f7v_A Aectylcitrulline deacet 22.6 59 0.002 33.9 4.0 43 41-85 8-53 (369)
117 3cpx_A Aminopeptidase, M42 fam 22.0 34 0.0012 35.3 1.9 41 43-85 18-58 (321)
118 3khx_A Putative dipeptidase sa 22.0 1E+02 0.0034 33.7 5.9 44 40-83 32-85 (492)
119 3k4i_A Uncharacterized protein 21.3 1.6E+02 0.0053 29.2 6.6 35 167-201 81-120 (244)
120 1vho_A Endoglucanase; structur 20.8 62 0.0021 33.4 3.7 41 43-85 6-46 (346)
121 2glf_A Probable M18-family ami 20.7 38 0.0013 36.9 2.0 27 325-351 71-97 (450)
122 3io1_A Aminobenzoyl-glutamate 20.1 1E+02 0.0035 33.1 5.4 41 41-83 13-53 (445)
No 1
>3fed_A Glutamate carboxypeptidase III; metallopeptidase, bimetallic active site, N-glycosylation, C cation, chloride anion, zinc IONS, dipept glycoprotein; HET: NAG BIX; 1.29A {Homo sapiens} PDB: 3fec_A* 3fee_A* 3ff3_A* 2c6c_A* 2c6g_A* 2c6p_A* 2cij_A* 2jbj_A* 2jbk_A* 3rbu_A* 3bi1_A* 2oot_A* 2pvv_A* 2pvw_A* 2xei_A* 2or4_A* 3bi0_A* 3bhx_A* 3d7d_A* 3d7f_A* ...
Probab=100.00 E-value=9.6e-129 Score=1123.29 Aligned_cols=660 Identities=36% Similarity=0.672 Sum_probs=590.7
Q ss_pred CCchhHHHHhhccCCCChhHHHHHHHHhhcCCCCCCCHhhHHHHHHHHHHHHHCCCc-eeeeEEEEEEeeeCc---cceE
Q 005260 24 QPKSFYHSLYTSTSLSDNVSISHHLHTLTRRPHVAGSEANAEAAAYVLSVFTSCSLE-SHIASYGVSLTYPVS---RSLS 99 (705)
Q Consensus 24 ~~~~~~~~~~~~~~~i~~~~i~~~L~~lss~~r~aGt~g~~~~a~~i~~~~~~~Gl~-~~~~~y~v~~~~P~~---~~l~ 99 (705)
....++++.+++ .++.++|++||++|++.||++||+++.++|+||+++|+++||+ +++++|+|+++||.. .+++
T Consensus 9 ~~~~~l~~~~~~--~~~~~~i~~~l~~lt~~ph~aGt~~~~~~a~yi~~~~~~~Gl~~v~~~~y~v~l~~P~~~~~~~l~ 86 (707)
T 3fed_A 9 RYHQSIRWKLVS--EMKAENIKSFLRSFTKLPHLAGTEQNFLLAKKIQTQWKKFGLDSAKLVHYDVLLSYPNETNANYIS 86 (707)
T ss_dssp ----CHHHHHHH--HCCHHHHHHHHHHHSSSCCCTTSHHHHHHHHHHHHHHHHHTCSEEEEEEEEEEEEECCTTSCCEEE
T ss_pred CCHHHHHHHHHH--hCCHHHHHHHHHHHhcCCCcCCCHhHHHHHHHHHHHHHHcCCCceeEEeeeEEeecccCCCCceEE
Confidence 445688899999 8999999999999999999999999999999999999999999 899999999999975 4688
Q ss_pred EecCCCCCCeEeeecccccCCCCCCCCCCccccccccCCCCcceEEeEEEecCCChhchHHHHhc-CCcccceEEEEEeC
Q 005260 100 LTRPPPQPPITFALRQEIYEGDPYADVADEVLPTFHGYAKSGTVIGPVVYVNYGRVEDYVTLKEM-VVNVTGTVVLARYG 178 (705)
Q Consensus 100 l~~~~g~~~~~~~l~e~~~~~~~~~~~~~~~~~~~~a~S~~G~v~g~lVyv~~G~~~D~~~L~~~-gv~v~GkIvl~~~g 178 (705)
|++++|+..+.+.+.|+.+++++ ...+.+++|++||++|+++|+|||||||+.+||+.|++. |++++|||||++||
T Consensus 87 l~~~~g~~~~~~~l~e~~~~~~~---~~~~~~~~f~ays~~G~v~g~lV~v~~G~~~Df~~L~~~~~~~v~GkIvlv~~G 163 (707)
T 3fed_A 87 IVDEHETEIFKTSYLEPPPDGYE---NVTNIVPPYNAFSAQGMPEGDLVYVNYARTEDFFKLEREMGINCTGKIVIARYG 163 (707)
T ss_dssp EECTTSCEEEECC---CCCTTCT---TCCCCCCSCCTTCCCBCCEECEEECTTCCHHHHHHHHHTSCCCCTTCEEEEECC
T ss_pred EEcCCCceeeeccccccCCcccc---ccccccccccccCCCCceEEEEEEecCCchhhHHHHHhccCCCCCCeEEEEECC
Confidence 88877776788888887776544 346788899999999999999999999999999999985 99999999999999
Q ss_pred CCcchhHHHHHHHcCCeEEEEEecCCCCCCCCCCCCcCCCCCCCCCCCceeeeee--cCCCCCCCCCCCCCCcccccchH
Q 005260 179 QIFRGDIVHNAFEAGAAGALIFTDRKDYGGGSDDARWFPDDKWMPPSGVQVGSVY--DGTGDPTTPGWPSSEGCERLSKE 256 (705)
Q Consensus 179 ~~~~~~k~~~A~~~GA~gvi~~~dp~~~~~~~~~~~~yP~~~~~p~~~v~rg~v~--~~~Gdp~tPg~ps~~~~~r~~~~ 256 (705)
+|+++.|+++|+++||+|||||+||.++... ..++||++||+|++++|||+|. .++|||+||||||.++++|+++.
T Consensus 164 ~~~~~~Kv~~A~~~GA~gviiy~dp~d~~~~--g~~~yP~~~~~p~~~vqrGsv~~~~~~GDp~TPG~ps~~~~~r~~~~ 241 (707)
T 3fed_A 164 KIFRGNKVKNAMLAGAIGIILYSDPADYFAP--EVQPYPKGWNLPGTAAQRGNVLNLNGAGDPLTPGYPAKEYTFRLDVE 241 (707)
T ss_dssp SSCHHHHHHHHHHTTCSEEEEECCHHHHCCT--TCCBTTTSSBCCTTCCCCCCCCCCTTCCSTTCTTSCCCTTCCCCCGG
T ss_pred CCCHhHHHHHHHHCCCEEEEEEcCchhcccc--ccccCCCCccCCCccccccceecccCCCCCCCCCCcccCCCcccChh
Confidence 9999999999999999999999998765321 1258999999999999999994 46799999999999999999988
Q ss_pred HHhhcCCCCCCCcccCCHHHHHHHHHHcCCCCCCcc-ccCCCCCCccccCCCC------eEEEEEEeeeeeeeeeeeEEE
Q 005260 257 EVEKAGNVPLIPSLPISAKDGETIMRSIGGEVANED-WQGDKDAPIYRVGPGP------GVVNLSYTGEYVMATIQNVIG 329 (705)
Q Consensus 257 ~~~~~~~~p~IP~~~is~~~a~~Ll~~l~~~~~~~~-w~~~l~~~~y~~gp~~------~~v~l~~~~~~~~~~~~NVia 329 (705)
++ ..+|+||++|||+++|++|++.|+|..+|.+ |+|+++ ++|++||+. .+|+|.+++..+..+++||||
T Consensus 242 ~~---~~~p~IP~~pIS~~da~~Ll~~l~g~~~p~~~W~g~~~-~~y~~gp~~~g~~~~~~v~l~v~~~~~~~~~~NVi~ 317 (707)
T 3fed_A 242 EG---VGIPRIPVHPIGYNDAEILLRYLGGIAPPDKSWKGALN-VSYSIGPGFTGSDSFRKVRMHVYNINKITRIYNVVG 317 (707)
T ss_dssp GC---TTCCSSCEEEECHHHHHHHHHTBCBSCCSSGGGCCSSS-SCCCCBSSBCCC-CCCEEEEEBCCEEEEEEEEEEEE
T ss_pred hc---cCCCCCCeEecCHHHHHHHHHHhcCCCCcccccccCcC-cceecccccCCCCCceeEEEEEEEEEEEEEEEEEEE
Confidence 64 4699999999999999999999998888876 999997 889999852 478999998888999999999
Q ss_pred EecCCCCCCcEEEEeeccCCcCCCCCCChhHHHHHHHHHHHHHHhHHcCCCCCCcEEEEEeCCccCCCCChHHHHHHHHH
Q 005260 330 IIPGTEEPDRLVILGNHRDAWTFGAVDPNSGTAALLEVAQRLNKLQKRGWKPRRTIVLCNWDAEEYGLIGSTEWVEENRE 409 (705)
Q Consensus 330 ~i~G~~~p~~~ViigaH~Ds~~~GA~DnaSG~A~lLElAr~l~~l~~~g~~p~rtI~Fv~~~~EE~Gl~GS~~~~~~~~~ 409 (705)
+|+|+.+++++||||||+|||..||.||+||+|+|||+||.|+++.+.||+|+|+|+||+|+|||.|++||++|++++..
T Consensus 318 ~i~G~~~~~~~vllgaH~Ds~~~Ga~D~~sG~a~lLe~ar~l~~~~~~g~~p~r~I~f~~~~~EE~Gl~GS~~~~~~~~~ 397 (707)
T 3fed_A 318 TIRGSVEPDRYVILGGHRDSWVFGAIDPTSGVAVLQEIARSFGKLMSKGWRPRRTIIFASWDAEEFGLLGSTEWAEENVK 397 (707)
T ss_dssp EECCSSEEEEEEEEEEECCCSSSCTTTTHHHHHHHHHHHHHHHHHHHTTCCCSEEEEEEEESCGGGTSHHHHHHHHHHHH
T ss_pred EEeCCCCCCceEEEeccccCCCCCCccCcHHHHHHHHHHHHHHhhhhccCCCCCCEEEEEeCCccccchhHHHHHHhcch
Confidence 99999767899999999999999999999999999999999999988899999999999999999999999999999988
Q ss_pred hhhccEEEEEEccCcccCC-ccccccChhHHHHHHHHHHHcCCCCC--CccchhhccccCC------CCCccccCCCCCC
Q 005260 410 MLASRAVAYLNIDSAVHEA-GFHASATPQLDELLKQAAKQVQDPDN--SSQTIYDSWTGSS------NSPVIGRLGGGGS 480 (705)
Q Consensus 410 ~l~~~~va~iNlD~~g~g~-~l~~~~sp~l~~l~~~~~~~v~~p~~--~~~~l~~~~~~~~------~~~~~~~~g~~~S 480 (705)
.+.+++++|||+||++.|. .|.+.++|.+..++.++++.+.+|.. .++++|+.|.... ..+.+..+| ++|
T Consensus 398 ~~~~~~~a~iNlD~~~~g~~~~~~~~sp~l~~~i~~~~~~v~~P~~~~~~~tly~~w~~~~~~~~~~~~p~i~~lg-sgS 476 (707)
T 3fed_A 398 ILQERSIAYINSDSSIEGNYTLRVDCTPLLYQLVYKLTKEIPSPDDGFESKSLYESWLEKDPSPENKNLPRINKLG-SGS 476 (707)
T ss_dssp HHHHHEEEEEECSCSBSCSSEEEEEECGGGHHHHHHHHTTSBCCSTTCTTSBHHHHHHHHSEETTEEEEECEECCC-SSS
T ss_pred hhhhCEEEEEEecccccCCceEEEecCHHHHHHHHHHHhcCCCCccccccccHHHHHHhhcccccccCCcccccCC-CCC
Confidence 8889999999999999984 78999999999999999999999864 3588999998632 123466788 999
Q ss_pred chHHHHhcCCceEEEeeeCC--------CCCCCCCCccchHHHHhhCCcchHHHHHHHHHHHHHHHHhCCCCCCCCChhh
Q 005260 481 DYAAFIQHIGVPVADMSFGT--------GYPVYHSMYDDFIWMEKFGDPTFQRHVAAASMWGLVALQLADEEFLPFNYLS 552 (705)
Q Consensus 481 D~~~F~~~~GIPs~~l~~~~--------~~p~yHt~~Dt~~~l~~~~dp~~~~~~~~a~~~~~l~~~La~~~~lP~d~~~ 552 (705)
||.||+++.|||++++.|.. .||+|||.+||++||++|+||+|.+|.+++++++.++++||+++++|||+.+
T Consensus 477 D~~~F~~~~GIPs~~~~f~~~~~~~~~~~y~~YHT~~Dt~~~~~~~~Dp~f~~h~~~a~~~g~l~l~La~~~vlP~~~~~ 556 (707)
T 3fed_A 477 DFEAYFQRLGIASGRARYTKNKKTDKYSSYPVYHTIYETFELVEKFYDPTFKKQLSVAQLRGALVYELVDSKIIPFNIQD 556 (707)
T ss_dssp TTHHHHHTTCCCEEEEEEECCTTTCCSSSCTTTTSTTCCHHHHHHHTCTTCHHHHHHHHHHHHHHHHHHHCSSCCCCHHH
T ss_pred ChHHHHHhCCcceeccccccCccccccCCCCCcCCCcccHHHHHHhcCchHHHHHHHHHHHHHHHHHHhCCccCCCCHHH
Confidence 99999998999999999862 5789999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHh-------hhcCCCCchHHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccHHHHHHHHHHHHH
Q 005260 553 YAFELQKSTKDLENE-------VSGKGISLIPLFKSIEELAKAAAKIDNEKKELQKAKGWASTWKKDQYKVRELNDRLMM 625 (705)
Q Consensus 553 y~~~l~~~~~~l~~~-------~~~~~~~~~~l~~a~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~l~~ 625 (705)
|+..|.+++++|.+. ++..+++|++|.+++.+|+++|++|++.++.++. .++..+|++|+|||+
T Consensus 557 ya~~l~~~~~~l~~~~~~~~~~l~~~~~~~~~L~~a~~~~~~~a~~~~~~~~~~~~---------~~~~~~r~~N~~l~~ 627 (707)
T 3fed_A 557 YAEALKNYAASIYNLSKKHDQQLTDHGVSFDSLFSAVKNFSEAASDFHKRLIQVDL---------NNPIAVRMMNDQLML 627 (707)
T ss_dssp HHHHHHHHHHHHHHHHGGGHHHHHHHTCCCHHHHHHHHHHHHHHHHHHHHHTTCCT---------TCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhhcchhhhcCcCHHHHHHHHHHHHHHHHHHHHHHHhhhc---------CCHHHHHHHHHHHHH
Confidence 999999999987521 2334689999999999999999999997765432 267899999999999
Q ss_pred HHHhccCCCCCCCCCCCceEEecCCCCCCCCCCcchhHHHHHHHH-hhhcchhcHHHHHHHHHHHHHHHHHHHHHhcccC
Q 005260 626 AERAFTDRDGLSGRPWYKHLIYAPSKHNDYGSKYFPAIDDAIEEA-MKLNTAKSWHTVQHEVWRVSRAVRHASLVLNGKL 704 (705)
Q Consensus 626 ~er~fl~~~glp~r~~~khv~~~p~~~~~y~~~~fpgi~da~~~~-~~~~~~~~~~~~~~ql~~v~~~i~~a~~~l~~~~ 704 (705)
+||+||+|+|||+|+|||||||||+.+++|++++||||+|||.+. +.....++|+++|+||++++++|++|++.|+..|
T Consensus 628 ~Er~fl~~~glp~r~~~kHvi~ap~~~~~y~~~~fPgi~dai~~~~~~~~~~~~~~~~~~ql~~~~~~i~~aa~~L~~~~ 707 (707)
T 3fed_A 628 LERAFIDPLGLPGKLFYRHIIFAPSSHNKYAGESFPGIYDAIFDIENKANSRLAWKEVKKHISIAAFTIQAAAGTLKEVL 707 (707)
T ss_dssp HHHHTBCTTCBTTBTTCCBSSEEEETTEEEEEEESHHHHHHHTTGGGCSCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC-
T ss_pred HHHHhcCCCCCCCCCCCceEEECCCCCCCccceeCchHHHHHHHhhccCcchhhHHHHHHHHHHHHHHHHHHHHHhhccC
Confidence 999999999999999999999999999999999999999999865 3333456899999999999999999999998653
No 2
>3kas_A Transferrin receptor protein 1; transferrin receptor 1, arenavirus, cell MEMB disulfide bond, endocytosis, HOST-virus inter receptor, secreted, transmembrane; HET: NAG FUC BMA MAN; 2.40A {Homo sapiens} PDB: 1de4_C* 3s9l_A* 3s9m_A* 3s9n_A* 1cx8_A* 1suv_A 2nsu_A
Probab=100.00 E-value=3.9e-112 Score=975.97 Aligned_cols=614 Identities=26% Similarity=0.416 Sum_probs=536.9
Q ss_pred hhHHHHhhccCCCChhHHHHHHHHhhc---CCCCCCCHhhHHHHHHHHHHHHHCCCc-eeeeEEEEEEeeeC--ccceEE
Q 005260 27 SFYHSLYTSTSLSDNVSISHHLHTLTR---RPHVAGSEANAEAAAYVLSVFTSCSLE-SHIASYGVSLTYPV--SRSLSL 100 (705)
Q Consensus 27 ~~~~~~~~~~~~i~~~~i~~~L~~lss---~~r~aGt~g~~~~a~~i~~~~~~~Gl~-~~~~~y~v~~~~P~--~~~l~l 100 (705)
.++++.+.+ .|++++|++||++|++ .+|.+||+|+.++++||+++|+++||+ ++.++|.+.+++|. ..++++
T Consensus 5 ~~l~~~l~~--~i~~~~i~~~L~~Lssd~~~~R~aGT~g~~~aa~yI~~~f~~~Gl~~v~~~~~~v~~~~~~~~~~~l~l 82 (640)
T 3kas_A 5 DDLKRKLSE--KLDSTDFTSTIKLLNENSYVPREAGSQKDENLALYVENQFREFKLSKVWRDQHFVKIQVKDSAQNSVII 82 (640)
T ss_dssp HHHHHHHHH--HHHTCCHHHHHHHTTSTTTSSCCTTSHHHHHHHHHHHHHHHHHTCSEEEEEEEEEEEEECCSSCCEEEE
T ss_pred HHHHHHHHH--hCCHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHHHHHHHcCCccccccceEEEEEeccCCCceEEE
Confidence 467888888 8999999999999999 699999999999999999999999998 57888888889883 356777
Q ss_pred ecCCCCCCeEeeecccccCCCCCCCCCCccccccccCCCCcceEEeEEEecCCChhchHHHHhcCCcccceEEEEEeCCC
Q 005260 101 TRPPPQPPITFALRQEIYEGDPYADVADEVLPTFHGYAKSGTVIGPVVYVNYGRVEDYVTLKEMVVNVTGTVVLARYGQI 180 (705)
Q Consensus 101 ~~~~g~~~~~~~l~e~~~~~~~~~~~~~~~~~~~~a~S~~G~v~g~lVyv~~G~~~D~~~L~~~gv~v~GkIvl~~~g~~ 180 (705)
++++|+..+.+. .+ ..|++||++|+++|+|||||||+.+||+.|+ ++++|||||+++|.|
T Consensus 83 ~~~~g~~~~~~~--------~~---------~~~~~~S~~g~v~g~lV~vg~G~~~D~~~l~---vdv~GkIvlv~~g~~ 142 (640)
T 3kas_A 83 VDKNGRLVYLVE--------NP---------GGYVAYSKAATVTGKLVHANFGTKKDFEDLY---TPVNGSIVIVRAGKI 142 (640)
T ss_dssp EETTTTEEEEEE--------CC---------SCCEETCCCEEEEECEEECTTCCHHHHHTCS---SCCTTSEEEEESCSS
T ss_pred EeCCCceeeecc--------CC---------cceeeecCCCceEEEEEEecCCChhhHHHhh---cccCCcEEEEecCCC
Confidence 665554221111 11 2478999999999999999999999999775 899999999999999
Q ss_pred cchhHHHHHHHcCCeEEEEEecCCCCCCCCCCCCcCCCCCCCCCCCceeeeeecCCCCCCCCCCCCCCcccccchHHHhh
Q 005260 181 FRGDIVHNAFEAGAAGALIFTDRKDYGGGSDDARWFPDDKWMPPSGVQVGSVYDGTGDPTTPGWPSSEGCERLSKEEVEK 260 (705)
Q Consensus 181 ~~~~k~~~A~~~GA~gvi~~~dp~~~~~~~~~~~~yP~~~~~p~~~v~rg~v~~~~Gdp~tPg~ps~~~~~r~~~~~~~~ 260 (705)
+++.|+++|+++||+|||+|+++.+++.. .....++|++..+.|||+||||||.++. +++..+.
T Consensus 143 ~~~~K~~~A~~~GA~gvii~~~~~~~~~~-------------~~~~~~~G~~~~~~Gdp~tpg~ps~~~~-~~~~~~~-- 206 (640)
T 3kas_A 143 TFAEKVANAESLNAIGVLIYMDQTKFPIV-------------NAELSFFGHAHLGTGDPYTPGFPSFNHT-QFPPSRS-- 206 (640)
T ss_dssp CHHHHHHHHHTTTCSEEEEECCTTTCCCS-------------CTTCCCCEECCSSSSCSCCCSSCC---C-CCCCCSS--
T ss_pred CHHHHHHHHHHCCCeEEEEEecccccccc-------------ccccccccccccCCCCCCCCCccccccc-ccccccc--
Confidence 99999999999999999999998655421 1123467888778999999999998654 3333221
Q ss_pred cCCCCCCCcccCCHHHHHHHHHHcCCCCCCccccCCCCCCccccCCCCeEEEEEEeeeeeeeeeeeEEEEecCCCCCCcE
Q 005260 261 AGNVPLIPSLPISAKDGETIMRSIGGEVANEDWQGDKDAPIYRVGPGPGVVNLSYTGEYVMATIQNVIGIIPGTEEPDRL 340 (705)
Q Consensus 261 ~~~~p~IP~~~is~~~a~~Ll~~l~~~~~~~~w~~~l~~~~y~~gp~~~~v~l~~~~~~~~~~~~NVia~i~G~~~p~~~ 340 (705)
..+|+||++|||+++|++|++.+++ ..+..|+++++ +.|.+||+ .++++++++..+..+++||||+|+|++.|+++
T Consensus 207 -~~~p~IP~~~Is~~~a~~Ll~~l~g-~~~~~~~~~~~-~~~~~g~~-~~v~l~v~~~~~~~~~~NVi~~i~G~~~~~~~ 282 (640)
T 3kas_A 207 -SGLPNIPVQTISRAAAEKLFGNMEG-DCPSDWKTDST-CRMVTSES-KNVKLTVSNVLKEIKILNIFGVIKGFVEPDHY 282 (640)
T ss_dssp -CCCCSSCEEECCHHHHHHHHTTEEE-ECCGGGCCCTT-CEEEECTT-EEEEEEECCEEEEEEEEEEEEEECCSSEEEEE
T ss_pred -cCCCCCCEEecCHHHHHHHHHHccC-CchhhhhcccC-cccccCCC-ceEEEEEEEEEEeeeEEEEEEEEeCCcCCCCc
Confidence 3589999999999999999999977 56789999986 88999874 57889888888889999999999999667899
Q ss_pred EEEeeccCCcCCCCCCChhHHHHHHHHHHHHHHhH-HcCCCCCCcEEEEEeCCccCCCCChHHHHHHHHHhhhccEEEEE
Q 005260 341 VILGNHRDAWTFGAVDPNSGTAALLEVAQRLNKLQ-KRGWKPRRTIVLCNWDAEEYGLIGSTEWVEENREMLASRAVAYL 419 (705)
Q Consensus 341 ViigaH~Ds~~~GA~DnaSG~A~lLElAr~l~~l~-~~g~~p~rtI~Fv~~~~EE~Gl~GS~~~~~~~~~~l~~~~va~i 419 (705)
||+|||+|||.+||+||+||+|+|||+||.|+++. +.||+|+|+|+|++|+|||.|++||++|++++...+.+++++||
T Consensus 283 vvvgaH~Ds~~~Ga~D~~sG~a~lLe~ar~l~~~~~~~g~~p~r~I~f~~~~~EE~gl~GS~~~~~~~~~~l~~~~~a~i 362 (640)
T 3kas_A 283 VVVGAQRDAWGPGAAKSGVGTALLLKLAQMFSDMVLKDGFQPSRSIIFASWSAGDFGSVGATEWLEGYLSSLHLKAFTYI 362 (640)
T ss_dssp EEEEEECCCSSCCTTTTHHHHHHHHHHHHHHHHHHHTSCCCCSEEEEEEEESSGGGTSHHHHHHHHHTTTTGGGTEEEEE
T ss_pred eeeecccCCCCCCCCcCcHHHHHHHHHHHHHHHhhhhcCCCCCCcEEEEEECCcccCchhHHHHHHhhhhhhhhCEEEEE
Confidence 99999999999999999999999999999999985 56899999999999999999999999999999877788999999
Q ss_pred EccCcccCC-ccccccChhHHHHHHHHHHHcCCCCCCccchhh--ccccCCCCCccccCCCCCCchHHHHhcCCceEEEe
Q 005260 420 NIDSAVHEA-GFHASATPQLDELLKQAAKQVQDPDNSSQTIYD--SWTGSSNSPVIGRLGGGGSDYAAFIQHIGVPVADM 496 (705)
Q Consensus 420 NlD~~g~g~-~l~~~~sp~l~~l~~~~~~~v~~p~~~~~~l~~--~~~~~~~~~~~~~~g~~~SD~~~F~~~~GIPs~~l 496 (705)
|+||++.|. .|.++++|.+..++.++++.+.+|.. ..++|+ .|.. .+..++ ++|||.||+++.|||++++
T Consensus 363 NlD~~~~G~~~l~~~~~p~l~~l~~~~~~~v~~P~~-~~tl~~~~~w~~-----~~~~~~-~~sD~~~F~~~~GIP~~~~ 435 (640)
T 3kas_A 363 NLDKAVLGTSNFKVSASPLLYTLIEKTMQNVKHPVT-GQFLYQDSNWAS-----KVEKLT-LDNAAFPFLAYSGIPAVSF 435 (640)
T ss_dssp ECTTCBSCSSEEEEEECGGGHHHHHHHHTTCBCTTT-CSBSCCCTTGGG-----GCCCCC-TTSTHHHHHHHHCCCEEEE
T ss_pred ecccCccCCCceEEEeCHHHHHHHHHHHHhCCCCCC-CCceeccccccc-----ccCCCC-CCcchHHHHHhCCCCeeec
Confidence 999999884 79999999999999999999998865 467876 4753 245566 8999999998889999999
Q ss_pred eeCC--CCCCCCCCccchHHHHhhCCcchHHHHHHHHHHHHHHHHhCCCCCCCCChhhHHHHHHHHHHHHHHhhhc---C
Q 005260 497 SFGT--GYPVYHSMYDDFIWMEKFGDPTFQRHVAAASMWGLVALQLADEEFLPFNYLSYAFELQKSTKDLENEVSG---K 571 (705)
Q Consensus 497 ~~~~--~~p~yHt~~Dt~~~l~~~~dp~~~~~~~~a~~~~~l~~~La~~~~lP~d~~~y~~~l~~~~~~l~~~~~~---~ 571 (705)
.|.. .|++|||.+||+++|++|.||+|++|.+++++++.++++||+++++|||+.+|++.|.+++++|++...+ .
T Consensus 436 ~~~~~~~y~~yHT~~Dt~~~i~~~~~~~~~~h~~~a~~~g~l~l~La~~~~lP~~~~~y~~~l~~~~~~l~~~~~~~~~~ 515 (640)
T 3kas_A 436 CFCEDTDYPYLGTTMDTYKELIERIPELNKVARAAAEVAGQFVIKLTHDVELNLDYERYNSQLLSFVRDLNQYRADIKEM 515 (640)
T ss_dssp EEECSSCCTTTTSTTCCHHHHHHHCTTHHHHHHHHHHHHHHHHHHHHHSSSCCCCTTHHHHHHHHHHHHHGGGTTTTTTT
T ss_pred cccCCCCCCCcCCccccHHHHHhhcCcHHHHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHhhhcc
Confidence 9863 4889999999999999999999999999999999999999999999999999999999999999875543 3
Q ss_pred CCCchHHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccHHHHHHHHHHHHHHHHhccCCCCCCCCCCCceEEecCCC
Q 005260 572 GISLIPLFKSIEELAKAAAKIDNEKKELQKAKGWASTWKKDQYKVRELNDRLMMAERAFTDRDGLSGRPWYKHLIYAPSK 651 (705)
Q Consensus 572 ~~~~~~l~~a~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~l~~~er~fl~~~glp~r~~~khv~~~p~~ 651 (705)
+++|++|.+|+.+|+++|++|++.++..+. .++..+|++|+|||++||+||+|+|+|+|+|||||||||+.
T Consensus 516 ~~~~~~l~~a~~~f~~aa~~~~~~~~~~~~---------~~~~~~r~~N~~l~~~er~fl~~~glp~r~~~kHvi~~p~~ 586 (640)
T 3kas_A 516 GLSLQWLYSARGDFFRATSRLTTDFGNAEK---------TDRFVMKKLNDRVMRVEYHFLSPYVSPKESPFRHVFWGSGS 586 (640)
T ss_dssp TCCCHHHHHHHHHHHHHHHHHHHHHHHSCT---------TCHHHHHHHHHHHHHHGGGGBCTTSCTTTCSCCBTTTSCST
T ss_pred CCChHHHHHHHHHHHHHHHHHHHHHHhccc---------CCHHHHHHHHHHHHHHHHhhcCcCCCCCCcccceeeecCCc
Confidence 699999999999999999999988875432 26778999999999999999999999999999999999986
Q ss_pred CCCCCCCcchhHHHHHHHHhhhcchhcHHHHHHHHHHHHHHHHHHHHHhcccC
Q 005260 652 HNDYGSKYFPAIDDAIEEAMKLNTAKSWHTVQHEVWRVSRAVRHASLVLNGKL 704 (705)
Q Consensus 652 ~~~y~~~~fpgi~da~~~~~~~~~~~~~~~~~~ql~~v~~~i~~a~~~l~~~~ 704 (705)
+ +||||.|+|...+.....++|+++++||++++++|+.|+++|+|+.
T Consensus 587 ~------~~pg~~~~~~~~~~~~~~~~~~~~~~q~~~~~~~i~~aa~~L~~~~ 633 (640)
T 3kas_A 587 H------TLPALLENLKLRKQNNGAFNETLFRNQLALATWTIQGAANALSGDV 633 (640)
T ss_dssp T------SHHHHHHHHHTTSSCSTTCCHHHHHHHHHHHHHHHHHHHHHHSCST
T ss_pred c------ccchHHHHHHHhhcCCchhhHHHHHHHHHHHHHHHHHHHHHhhhhh
Confidence 5 4899999998776666678999999999999999999999999974
No 3
>2ek8_A Aminopeptidase; metalloproteinase, hydrolase; 1.80A {Aneurinibacillus SP} PDB: 2ek9_A*
Probab=100.00 E-value=5.1e-57 Score=501.21 Aligned_cols=398 Identities=22% Similarity=0.323 Sum_probs=312.9
Q ss_pred HHHhhccCCCChhHHHHHHHHhhcCCCCCCCHhhHHHHHHHHHHHHHCCCceeeeEEEEEEeeeCccceEEecCCCCCCe
Q 005260 30 HSLYTSTSLSDNVSISHHLHTLTRRPHVAGSEANAEAAAYVLSVFTSCSLESHIASYGVSLTYPVSRSLSLTRPPPQPPI 109 (705)
Q Consensus 30 ~~~~~~~~~i~~~~i~~~L~~lss~~r~aGt~g~~~~a~~i~~~~~~~Gl~~~~~~y~v~~~~P~~~~l~l~~~~g~~~~ 109 (705)
++.+++ .|+.+++++||++|++.+|.+||+|+.++++||+++|+++||+++.++|. +...+.....++.. ++.
T Consensus 6 ~~~~~~--~i~~~~~~~~l~~Ls~~~R~~Gs~g~~~a~~yi~~~~~~~Gl~~~~q~~~-~~~~~~~~~~~l~~-~~~--- 78 (421)
T 2ek8_A 6 DHQITK--RTDAENMYNTIQFLSQAPRVAGSPEELKAVRYIEQQFKSYGYHVEVQPFQ-FEGYTAPSEVTLKI-GTE--- 78 (421)
T ss_dssp HHHHHT--TCCHHHHHHHHHHHTTSCCCTTSHHHHHHHHHHHHHHHHTTCEEEEEEEE-EEEEECCSEEEEEE-TTE---
T ss_pred HHHHHh--hCCHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHHHCCCceEEEEEE-eeccccCCceEEEE-CCe---
Confidence 346888 89999999999999999999999999999999999999999999999888 44433322122221 111
Q ss_pred EeeecccccCCCCCCCCCCccccccccCCCCcceEEeEEEecCCChhchHHHHhcCCcccceEEEEEeCCCcchhHHHHH
Q 005260 110 TFALRQEIYEGDPYADVADEVLPTFHGYAKSGTVIGPVVYVNYGRVEDYVTLKEMVVNVTGTVVLARYGQIFRGDIVHNA 189 (705)
Q Consensus 110 ~~~l~e~~~~~~~~~~~~~~~~~~~~a~S~~G~v~g~lVyv~~G~~~D~~~L~~~gv~v~GkIvl~~~g~~~~~~k~~~A 189 (705)
.+.+.+++||++|+++|+|||+|||.++||+ +++++|||||+++|.|.++.|+.+|
T Consensus 79 -------------------~~~~~~~~~s~~g~v~a~lv~~~~G~~~D~~-----~~dv~GkIvlv~~g~~~~~~k~~~A 134 (421)
T 2ek8_A 79 -------------------KKEGEAFTYSPNSDVTAELVYVGLGTTADVA-----GKDLNGKIALIQRGNISFADKVRNA 134 (421)
T ss_dssp -------------------EECCEECBTCCCEEEEEEEEECTTCCTTTTT-----TSCCTTSEEEEECCSSCHHHHHHHH
T ss_pred -------------------eccccccccCCCCCcceEEEECCCCChhhcC-----CCCcCceEEEEeCCCCCHHHHHHHH
Confidence 1123567899999999999999999999997 7899999999999999999999999
Q ss_pred HHcCCeEEEEEecCCCCCCCCCCCCcCCCCCCCCCCCceeeeeecCCCCCCCCCCCCCCcccccchHHHhhcCCCCCCCc
Q 005260 190 FEAGAAGALIFTDRKDYGGGSDDARWFPDDKWMPPSGVQVGSVYDGTGDPTTPGWPSSEGCERLSKEEVEKAGNVPLIPS 269 (705)
Q Consensus 190 ~~~GA~gvi~~~dp~~~~~~~~~~~~yP~~~~~p~~~v~rg~v~~~~Gdp~tPg~ps~~~~~r~~~~~~~~~~~~p~IP~ 269 (705)
+++||+|||+|+++.. . .+|++ |++ ..++||+
T Consensus 135 ~~~GA~gvIi~~~~~~--~-------------------~~g~~----~~~-----------------------~~~~IP~ 166 (421)
T 2ek8_A 135 AKQGAKAVIIYNNTDG--K-------------------LNGTL----GGS-----------------------DASFVAA 166 (421)
T ss_dssp HHTTCSEEEEECSSSS--C-------------------CCCBC----SSC-----------------------CTTCCEE
T ss_pred HHCCCeEEEEEeCCCc--c-------------------ccccc----CCC-----------------------CCCCccE
Confidence 9999999999987521 0 11111 111 2568999
Q ss_pred ccCCHHHHHHHHHHcCCCCCCccccCCCCCCccccCCCCeEEEEEEeeeeeeeeeeeEEEEecCCCC---CCcEEEEeec
Q 005260 270 LPISAKDGETIMRSIGGEVANEDWQGDKDAPIYRVGPGPGVVNLSYTGEYVMATIQNVIGIIPGTEE---PDRLVILGNH 346 (705)
Q Consensus 270 ~~is~~~a~~Ll~~l~~~~~~~~w~~~l~~~~y~~gp~~~~v~l~~~~~~~~~~~~NVia~i~G~~~---p~~~ViigaH 346 (705)
++||.++++.|++.+.+.. .| +..+++.++. .+..+++||||+++|+.. ++++|++++|
T Consensus 167 ~~Is~~~a~~L~~~l~~~~---------------~g--~~~v~l~~~~-~~~~~~~Nvi~~~~g~~~~~~~~~~v~~~aH 228 (421)
T 2ek8_A 167 VGITKQEGDALAANLRAGE---------------KI--TATVKVAGAE-VKTLTSHNVIATKKPDANKKNTNDIIIIGSH 228 (421)
T ss_dssp EEECHHHHHHHHHHHHTTC---------------CC--EEEEEEESCE-EEEEEEEEEEEEECCCSSTTCCCCEEEEEEE
T ss_pred EEeCHHHHHHHHHHhhhhc---------------cC--Cccccccccc-cccccccceEEEecCcccCCCCCCEEEEecc
Confidence 9999999999999883110 01 3467777776 677889999999999743 6899999999
Q ss_pred cCCcCC--CCCCChhHHHHHHHHHHHHHHhHHcCCCCCCcEEEEEeCCccCCCCChHHHHHHHHHhhhccEEEEEEccCc
Q 005260 347 RDAWTF--GAVDPNSGTAALLEVAQRLNKLQKRGWKPRRTIVLCNWDAEEYGLIGSTEWVEENREMLASRAVAYLNIDSA 424 (705)
Q Consensus 347 ~Ds~~~--GA~DnaSG~A~lLElAr~l~~l~~~g~~p~rtI~Fv~~~~EE~Gl~GS~~~~~~~~~~l~~~~va~iNlD~~ 424 (705)
+|||.. ||.||++|+|+|||+||.|.++ +|+|+|+|++|++||.|+.||++|++++...+.+++++|||+||+
T Consensus 229 ~D~v~~g~Ga~D~~~G~a~~le~~~~l~~~-----~~~~~i~~~~~~~EE~g~~Gs~~~~~~~~~~~~~~~~~~in~D~~ 303 (421)
T 2ek8_A 229 HDSVEKAPGANDDASGVAVTLELARVMSKL-----KTDTELRFITFGAEENGLIGSKKYAASLSEDEIKRTIGMFQLDMV 303 (421)
T ss_dssp CCCCTTCCCTTTTHHHHHHHHHHHHHHTTS-----CCSSEEEEEEESSSTTTSHHHHHHHTTCCHHHHHHEEEEEEECSC
T ss_pred cccCCCCCCCCCCcHhHHHHHHHHHHHhcc-----CCCceEEEEEECCccccchhHHHHHHhCccchhhcEEEEEEeccc
Confidence 999987 9999999999999999999763 789999999999999999999999998766667899999999999
Q ss_pred ccCC--cccc---ccCh-hHHHHHHHHHHHcCCCCCCccchhhccccCCCCCccccCCCCCCchHHHHhcCCceEEEeee
Q 005260 425 VHEA--GFHA---SATP-QLDELLKQAAKQVQDPDNSSQTIYDSWTGSSNSPVIGRLGGGGSDYAAFIQHIGVPVADMSF 498 (705)
Q Consensus 425 g~g~--~l~~---~~sp-~l~~l~~~~~~~v~~p~~~~~~l~~~~~~~~~~~~~~~~g~~~SD~~~F~~~~GIPs~~l~~ 498 (705)
|.+. .+.+ .+++ ....+....++.+..| .....+ ++|||.+|.+ .|||++.+..
T Consensus 304 g~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~------------------~~~~~~-~~SD~~~F~~-~GIP~~~~~~ 363 (421)
T 2ek8_A 304 GSKDAGDLIMYTIDGKKNRVTDLGAAASSRLSGV------------------LPYGQE-GRSDHESFHA-LGIPAALFIH 363 (421)
T ss_dssp CBTTSCEEEEEETTSCCCHHHHHHHHHHHHHTSC------------------CCEEEC-CSSTHHHHHT-TTCCEEEEEE
T ss_pred CCCCCcceEEecCCCccccchhhHHHHHHhcCCC------------------CCCCCC-CCCccHHHHH-CCCCEEEEEC
Confidence 8762 2221 2222 2233333333332111 112233 7899999997 7999998764
Q ss_pred CCCCCCCCCCccchHHHHhhCCcchHHHHHHHHHHHHHHHHhCCCCCCCCChhhHHH
Q 005260 499 GTGYPVYHSMYDDFIWMEKFGDPTFQRHVAAASMWGLVALQLADEEFLPFNYLSYAF 555 (705)
Q Consensus 499 ~~~~p~yHt~~Dt~~~l~~~~dp~~~~~~~~a~~~~~l~~~La~~~~lP~d~~~y~~ 555 (705)
...+++|||++||+++++ +.....++++++.++++||+.+++||+...|..
T Consensus 364 ~~~~~~yHt~~Dt~~~i~------~~~l~~~~~~~~~~~~~la~~~~~p~~~~~y~~ 414 (421)
T 2ek8_A 364 APVEPWYHTPNDTLDKIS------KEKLDNVADIVGSAVYQAARPGELVIEPIDYPR 414 (421)
T ss_dssp ESCCTTTTSTTCCGGGBC------HHHHHHHHHHHHHHHHHHHSSSCCCCCCCCCCB
T ss_pred CcCCCCCCCcccchhhCC------HHHHHHHHHHHHHHHHHHhCCCccCCChhhhhh
Confidence 344689999999998763 344568899999999999999999999988864
No 4
>3iib_A Peptidase M28; YP_926796.1, structural genomics, J center for structural genomics, JCSG, protein structure INI PSI-2; HET: PGE; 1.70A {Shewanella amazonensis SB2B}
Probab=100.00 E-value=1.2e-52 Score=468.18 Aligned_cols=403 Identities=20% Similarity=0.246 Sum_probs=305.0
Q ss_pred HHHHhhccCCCChhHHHHHHHHhhc--CCCCCCCHhhHHHHHHHHHHHHHCCC-ceeeeEEEEEEeeeCccceEEecCCC
Q 005260 29 YHSLYTSTSLSDNVSISHHLHTLTR--RPHVAGSEANAEAAAYVLSVFTSCSL-ESHIASYGVSLTYPVSRSLSLTRPPP 105 (705)
Q Consensus 29 ~~~~~~~~~~i~~~~i~~~L~~lss--~~r~aGt~g~~~~a~~i~~~~~~~Gl-~~~~~~y~v~~~~P~~~~l~l~~~~g 105 (705)
++++.-+ .++.++++++|++|+. .+|++||+|+.++++||.++|+++|+ +++.++|.+..|.+...++++..+.+
T Consensus 10 ~~~i~~~--~~~~~~~~~~l~~l~~~~G~R~~GS~g~~~a~~~i~~~l~~~G~~~v~~q~f~~~~w~~~~~~~~~~~~~~ 87 (444)
T 3iib_A 10 AEQLAQK--AQSSSLGYDIVESLTVEVGPRLAGSEQDKVAVDWAIAKLQSLGFDRVYKEPVTVPVWRRGIAKASILSPFP 87 (444)
T ss_dssp HHHHHHH--HHHCCHHHHHHHHHHHHTCCCCTTSHHHHHHHHHHHHHHHHTTCSEEEEEEEEEEEEEEEEEEEEEEESSC
T ss_pred HHHHHHH--HhcccHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHcCCCceEeeeEEeccEEecceEEEEeCCCC
Confidence 3444444 6778899999999995 38999999999999999999999999 58999999888887777777765432
Q ss_pred CCCeEeeecccccCCCCCCCCCCccccccccCCCCcceEEeEEEecCCChhchHHHHh-cCCcccceEEEEEeCCCc---
Q 005260 106 QPPITFALRQEIYEGDPYADVADEVLPTFHGYAKSGTVIGPVVYVNYGRVEDYVTLKE-MVVNVTGTVVLARYGQIF--- 181 (705)
Q Consensus 106 ~~~~~~~l~e~~~~~~~~~~~~~~~~~~~~a~S~~G~v~g~lVyv~~G~~~D~~~L~~-~gv~v~GkIvl~~~g~~~--- 181 (705)
. .+.. ...++.+.+|+|+++|+||+++ +++.+++ .+.+|+|||||++.+.|.
T Consensus 88 ~---~~~~----------------~~l~~s~~tp~~~vta~lV~v~-----~~~~~~~~~~~dvkGKIVlv~~~~~~~~~ 143 (444)
T 3iib_A 88 Q---PLVV----------------TALGGSIATPAQGLSATIVRFD-----TLQDLQNAEAGSLNDKIAFIDAKTERHRD 143 (444)
T ss_dssp E---EECE----------------EECBTCCCCCTTCEEEEEEEES-----SHHHHHTSCTTTTTTCEEEECCCCCCCTT
T ss_pred c---eEEE----------------EeccCCCCCCCCCeEEEEEecC-----CHHHHhhccccccCccEEEEeCCCCCCcc
Confidence 2 1110 0112233347899999999995 3444433 256999999999887663
Q ss_pred ------chhH----HHHHHHcCCeEEEEEecCCCCCCCCCCCCcCCCCCCCCCCCceeeeeecCCCCCCCCCCCCCCccc
Q 005260 182 ------RGDI----VHNAFEAGAAGALIFTDRKDYGGGSDDARWFPDDKWMPPSGVQVGSVYDGTGDPTTPGWPSSEGCE 251 (705)
Q Consensus 182 ------~~~k----~~~A~~~GA~gvi~~~dp~~~~~~~~~~~~yP~~~~~p~~~v~rg~v~~~~Gdp~tPg~ps~~~~~ 251 (705)
...| +.+|+++||+|||++++..+... .|.+ |. .+++
T Consensus 144 ~~~y~~~~~kr~~~a~~A~~aGA~avIi~~~~~~~~~-------------~~~t----g~----------~~~~------ 190 (444)
T 3iib_A 144 GKGYGQTASGRSRGAVAAAEKGAVGIIIRSIGTDHDR-------------MAHT----GM----------MRYE------ 190 (444)
T ss_dssp CHHHHHHHHHHHHHHHHHHHTTCSEEEEECSCSCCSS-------------CCCC----CB----------CCCC------
T ss_pred cccccchhhhhhhHHHHHHHCCCeEEEEEccCCcccc-------------cccC----Cc----------cccC------
Confidence 1233 56799999999999986432110 0111 11 0111
Q ss_pred ccchHHHhhcCCCCCCCcccCCHHHHHHHHHHcCCCCCCccccCCCCCCccccCCCCeEEEEEEeeeee-eeeeeeEEEE
Q 005260 252 RLSKEEVEKAGNVPLIPSLPISAKDGETIMRSIGGEVANEDWQGDKDAPIYRVGPGPGVVNLSYTGEYV-MATIQNVIGI 330 (705)
Q Consensus 252 r~~~~~~~~~~~~p~IP~~~is~~~a~~Ll~~l~~~~~~~~w~~~l~~~~y~~gp~~~~v~l~~~~~~~-~~~~~NVia~ 330 (705)
...++||+++||.++|+.|++++.+ |+ +++++++++.... ..+++||||+
T Consensus 191 ----------~~~~~IP~~~Is~~da~~L~~~l~~------------------g~-~~~v~l~~~~~~~~~~~~~Nvi~~ 241 (444)
T 3iib_A 191 ----------EGVTAIPAAAISNPDADLINAMLKR------------------DK-EVVISLELGSERRGETTSYNVIAE 241 (444)
T ss_dssp ----------TTSCCCCEEEECHHHHHHHHHHHTT------------------TC-CCEEEEEEEEEEEEEEEEEEEEEE
T ss_pred ----------CCCCCCCeEEecHHHHHHHHHHHhC------------------CC-CeEEEEEEeeeEcCCceeEEEEEE
Confidence 1357999999999999999999863 22 4578888877654 7899999999
Q ss_pred ecCCCCCCcEEEEeeccCCcCC--CCCCChhHHHHHHHHHHHHHHhHHcCCCCCCcEEEEEeCCccCCCCChHHHHHHHH
Q 005260 331 IPGTEEPDRLVILGNHRDAWTF--GAVDPNSGTAALLEVAQRLNKLQKRGWKPRRTIVLCNWDAEEYGLIGSTEWVEENR 408 (705)
Q Consensus 331 i~G~~~p~~~ViigaH~Ds~~~--GA~DnaSG~A~lLElAr~l~~l~~~g~~p~rtI~Fv~~~~EE~Gl~GS~~~~~~~~ 408 (705)
|+|.+.++++|+++||+|||.. ||+||++|+++|||+||.|+++ +|+|+|+|+|++|++||.|++||++|++++.
T Consensus 242 ~~g~~~~~~~i~~~aH~Ds~~~g~Ga~D~~sG~a~~le~a~~l~~~---~~~~~~~i~f~~~~~EE~gl~Gs~~~~~~~~ 318 (444)
T 3iib_A 242 VKGSTKADEIVLIGAHLDSWDEGTGAIDDGAGVAIVTAAAKHILDL---PQKPERTIRVVLYAAEELGLLGGKTYAKEHE 318 (444)
T ss_dssp ECCSTEEEEEEEEEEECCCCSSSCCTTTTHHHHHHHHHHHHHHHTS---SSCCSEEEEEEEESCGGGTSHHHHHHHHHTG
T ss_pred EeCCCCCCCEEEEEeecccCCCCCCCccchHHHHHHHHHHHHHHhc---CCCCCCeEEEEEECCcccCCcCHHHHHHhhH
Confidence 9998766899999999999984 9999999999999999998764 6899999999999999999999999999986
Q ss_pred HhhhccEEEEEEccCcccC-CccccccChhHHHHHHHHHHHcCCCCCCccchhhccccCCCCCccccCCCCCCchHHHHh
Q 005260 409 EMLASRAVAYLNIDSAVHE-AGFHASATPQLDELLKQAAKQVQDPDNSSQTIYDSWTGSSNSPVIGRLGGGGSDYAAFIQ 487 (705)
Q Consensus 409 ~~l~~~~va~iNlD~~g~g-~~l~~~~sp~l~~l~~~~~~~v~~p~~~~~~l~~~~~~~~~~~~~~~~g~~~SD~~~F~~ 487 (705)
.. .++++++||+||.+.. ..+...+.+....+++...+... +.. + .+.....+ ++|||.+|.+
T Consensus 319 ~~-~~~~~~~~n~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g----~---------~~~~~~~~-~~SD~~~f~~ 382 (444)
T 3iib_A 319 AE-LEKHYIAAESDFGAGPIYQIDWRVADTAHSPVINAMKVAE-PLG----V---------AAGNNKAS-GGPDVSMLPA 382 (444)
T ss_dssp GG-GGGEEEEEECCSTTCCEEEEEEECCHHHHHHHHHHGGGGG-GGT----C---------EECCSCCC-CCGGGTTSGG
T ss_pred hh-hhceeEEEECcCCCCcceEEEeecChhhHHHHHHHHHHHh-hcC----C---------ccccCCCC-CCCccHHHHH
Confidence 55 4689999999997654 34555677777777776655331 111 0 01112233 7899999998
Q ss_pred cCCceEEEeeeCC--CCCCCCCCccchHHHHhhCCcchHHHHHHHHHHHHHHHHhCCCCC
Q 005260 488 HIGVPVADMSFGT--GYPVYHSMYDDFIWMEKFGDPTFQRHVAAASMWGLVALQLADEEF 545 (705)
Q Consensus 488 ~~GIPs~~l~~~~--~~p~yHt~~Dt~~~l~~~~dp~~~~~~~~a~~~~~l~~~La~~~~ 545 (705)
.|||++.+...+ .+++|||++||+++++ +..+...+++++.+++.||+.+.
T Consensus 383 -~GiP~~~l~~~~~~~~~~yHt~~Dt~d~id------~~~l~~~~~~~~~~v~~lA~~~~ 435 (444)
T 3iib_A 383 -LGVPVASLRQDGSDYFDYHHTPNDTLDKIN------PEALAQNVAVYAQFAWVMANSKV 435 (444)
T ss_dssp -GTCCEEEEEECCTTGGGTTTSTTCCGGGSC------HHHHHHHHHHHHHHHHHHHHCCC
T ss_pred -CCCCEEEeecCCCcCCCCCCCCccccccCC------HHHHHHHHHHHHHHHHHHhcCCC
Confidence 699999998743 2479999999999873 45677888999999999999653
No 5
>4f9u_A CG32412; alpha/beta hydrolase, PGlu formation, PE, alzheimer'S diseas pyroglutamate, PGlu-amyloid, glycosylation, transferase, HY; HET: PBD NAG BMA MAN; 1.80A {Drosophila melanogaster} PDB: 4f9v_A*
Probab=100.00 E-value=4.1e-33 Score=297.19 Aligned_cols=219 Identities=19% Similarity=0.165 Sum_probs=163.1
Q ss_pred eeeeeeeEEEEecCCCCCCcEEEEeeccCCcC-------CCCCCChhHHHHHHHHHHHHHHhHHc--CCCCCCcEEEEEe
Q 005260 320 VMATIQNVIGIIPGTEEPDRLVILGNHRDAWT-------FGAVDPNSGTAALLEVAQRLNKLQKR--GWKPRRTIVLCNW 390 (705)
Q Consensus 320 ~~~~~~NVia~i~G~~~p~~~ViigaH~Ds~~-------~GA~DnaSG~A~lLElAr~l~~l~~~--g~~p~rtI~Fv~~ 390 (705)
...+..||||+++|.. +++|||+||||||+ +||+|||||||+|||+||+|+++.++ +++|+|||+|++|
T Consensus 62 ~~~~~~Nii~~~~~~~--~~~vvl~aHyDs~~~~~~~~~~GA~DnaSGvA~lLElAR~l~~~~~~~~~~~p~~tI~fv~f 139 (312)
T 4f9u_A 62 GELTFANVVGTINPQA--QNFLALACHYDSKYFPNDPGFVGATDSAVPCAILLNTAKTLGAYLQKEFRNRSDVGLMLIFF 139 (312)
T ss_dssp EEEEEEEEEEEESTTS--SEEEEEEEECCCCCCTTCTTCCCTTTTHHHHHHHHHHHHHTHHHHTTGGGSCSSEEEEEEEE
T ss_pred CceeEEEEEEEECCCC--CceEEEEEEEecCCCCCCCCCCCccCCcccHHHHHHHHHHHHHHHHhhccCCCCceEEEEEe
Confidence 3467889999999964 78999999999985 39999999999999999999988644 5689999999999
Q ss_pred CCccCC--------CCChHHHHHHHHHhh-----------hccEEEEEEccCcccC-Ccc--ccccChhHHHHHHHHHHH
Q 005260 391 DAEEYG--------LIGSTEWVEENREML-----------ASRAVAYLNIDSAVHE-AGF--HASATPQLDELLKQAAKQ 448 (705)
Q Consensus 391 ~~EE~G--------l~GS~~~~~~~~~~l-----------~~~~va~iNlD~~g~g-~~l--~~~~sp~l~~l~~~~~~~ 448 (705)
+|||.| ++||++|++++.... .+++.++||+||+|.. ..+ ...++..+...+.+..+.
T Consensus 140 daEE~G~~~~~~~~L~GS~~~a~~~~~~~~~~~~~~~~~~~~~i~~~inlDmvg~~~~~~~~~~~~~~~~~~~~~~i~~~ 219 (312)
T 4f9u_A 140 DGEEAFKEWTDADSVYGSKHLAAKLASKRSGSQAQLAPRNIDRIEVLVLLDLIGARNPKFSSFYENTDGLHSSLVQIEKS 219 (312)
T ss_dssp SCCSCSSSCSSSSSCHHHHHHHHHHHHCBC-------CBGGGGEEEEEEEESCCSSSCCEEECCGGGHHHHHHHHHHHHH
T ss_pred cCccccccCCccccccChHHHHHHHHhhccccccccccccccceeeeeeeeccccCCCCceEEEeccchhhhHHHHHHHH
Confidence 999988 899999999986542 3579999999999876 332 223333444443333332
Q ss_pred cCCCCCCccchhhccccCCCCCccccCCCCCCchHHHHhcCCceEEEeeeCCCCCCCCCCccchHHHHhhCCcchHHHHH
Q 005260 449 VQDPDNSSQTIYDSWTGSSNSPVIGRLGGGGSDYAAFIQHIGVPVADMSFGTGYPVYHSMYDDFIWMEKFGDPTFQRHVA 528 (705)
Q Consensus 449 v~~p~~~~~~l~~~~~~~~~~~~~~~~g~~~SD~~~F~~~~GIPs~~l~~~~~~p~yHt~~Dt~~~l~~~~dp~~~~~~~ 528 (705)
+..... ...+.... .+..... ..+|||.||++ .|||++++......++|||+.||+++|+ +..+..
T Consensus 220 ~~~~~~--~~~~~~~~----~~~~~~~-~~~SDH~pF~~-~GIP~l~~~~~~~~~~yHt~~Dt~d~id------~~~l~~ 285 (312)
T 4f9u_A 220 LRTAGQ--LEGNNNMF----LSRVSGG-LVDDDHRPFLD-ENVPVLHLVATPFPDVWHTPRDNAANLH------WPSIRN 285 (312)
T ss_dssp HHHTTC--SSSSCCCE----EEEECSS-CCCCTTHHHHT-TTCCEEEEECSSCCTTTTSTTCSGGGCC------HHHHHH
T ss_pred HHHhcc--cccccccc----ccccCCC-CCCCchHHHHH-CCCCEEEEECCCCCCCCCCCccChhhCC------HHHHHH
Confidence 211000 00000000 0111122 26899999998 6999999987665678999999999883 456778
Q ss_pred HHHHHHHHHHHhCCCCCCCCChhhHH
Q 005260 529 AASMWGLVALQLADEEFLPFNYLSYA 554 (705)
Q Consensus 529 ~a~~~~~l~~~La~~~~lP~d~~~y~ 554 (705)
+++++..++++..+.+..|+|+.-|+
T Consensus 286 ~~~i~~~fv~e~l~~~~~P~d~~~y~ 311 (312)
T 4f9u_A 286 FNRVFRNFVYQYLKRHTSPVNLRFYR 311 (312)
T ss_dssp HHHHHHHHHHHHHHHCCSCCCCCC--
T ss_pred HHHHHHHHHHHHHhCCCCCCchhhhc
Confidence 99999999999999999999998775
No 6
>4fai_A CG5976, isoform B; alpha/beta hydrolase, PGlu formation, PE, alzheimer'S diseas pyroglutamate, PGlu-amyloid, transferase, hydrolase; HET: PBD; 1.65A {Drosophila melanogaster} PDB: 4fbe_A*
Probab=99.97 E-value=9.8e-31 Score=280.63 Aligned_cols=210 Identities=20% Similarity=0.163 Sum_probs=146.8
Q ss_pred eeeeeeEEEEecCCCCCCcEEEEeeccCCcC------CCCCCChhHHHHHHHHHHHHHHhHHcCCCCCCcEEEEEeCCcc
Q 005260 321 MATIQNVIGIIPGTEEPDRLVILGNHRDAWT------FGAVDPNSGTAALLEVAQRLNKLQKRGWKPRRTIVLCNWDAEE 394 (705)
Q Consensus 321 ~~~~~NVia~i~G~~~p~~~ViigaH~Ds~~------~GA~DnaSG~A~lLElAr~l~~l~~~g~~p~rtI~Fv~~~~EE 394 (705)
..+..||||+++|.. +++|||+||||||. .||+|||||||+|||+||.|++..+.+++|+|+|+|++|+|||
T Consensus 90 ~~~~~Nii~~~~~~~--~~~i~l~aHyDs~~~~~~~~~GA~DnasG~A~lLE~Ar~l~~~~~~~~~p~rtI~fv~fdgEE 167 (330)
T 4fai_A 90 KLHFHNIIATLNPNA--ERYLVLSCHYDSKYMPGVEFLGATDSAVPCAMLLNLAQVLQEQLKPLKKSKLSLMLLFFDGEE 167 (330)
T ss_dssp EEEEEEEEEESCTTC--SEEEEEEEECCCCCCTTSCCCCTTTTHHHHHHHHHHHHHTHHHHGGGGTSSEEEEEEEESCCS
T ss_pred ceeEEEEEEEECCCC--CcEEEEEEeecccccccCCCCCCCCccHhHHHHHHHHHHHHHhhhccCCCCccEEEEEecccc
Confidence 467789999999964 78999999999985 3999999999999999999999887889999999999999999
Q ss_pred CCC--------CChHHHHHHHHHh-hhccEEEEEEccCcccC-Cccc--cccChhHHHHHHHHHHHcCCCCC------C-
Q 005260 395 YGL--------IGSTEWVEENREM-LASRAVAYLNIDSAVHE-AGFH--ASATPQLDELLKQAAKQVQDPDN------S- 455 (705)
Q Consensus 395 ~Gl--------~GS~~~~~~~~~~-l~~~~va~iNlD~~g~g-~~l~--~~~sp~l~~l~~~~~~~v~~p~~------~- 455 (705)
.|+ +||++|++++... ..++++++||+||+|.+ ..+. ...+......+....+.+..... .
T Consensus 168 ~Gl~~~~~~~llGS~~~a~~~~~~~~~~~i~~~inlDmiG~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (330)
T 4fai_A 168 AFEEWGPKDSIYGARHLAKKWHHEGKLDRIDMLVLLDLLGAPDPAFYSFFENTESWYMRIQSVETRLAKLQLLERYASSG 247 (330)
T ss_dssp CSSSCBTTBSCHHHHHHHHHHHHTTCSTTEEEEEEECSCSSSSCCEEECCGGGHHHHHHHHHHHHHHHHTTC--------
T ss_pred ccccccccchhhhhHHHHhcchhccchhceeEEEEeccCccCCCCceeeccCcchHHHHHHHHHHHhhhhhhhhhhhccc
Confidence 995 7999999987653 34789999999999876 3332 22333332222222211100000 0
Q ss_pred -ccchhhccccCCCCCccccCCCCCCchHHHHhcCCceEEEeeeCCCCCCCCCCccchHHHHhhCCcchHHHHHHHHHHH
Q 005260 456 -SQTIYDSWTGSSNSPVIGRLGGGGSDYAAFIQHIGVPVADMSFGTGYPVYHSMYDDFIWMEKFGDPTFQRHVAAASMWG 534 (705)
Q Consensus 456 -~~~l~~~~~~~~~~~~~~~~g~~~SD~~~F~~~~GIPs~~l~~~~~~p~yHt~~Dt~~~l~~~~dp~~~~~~~~a~~~~ 534 (705)
.......++. ......++.+|||.||++ .|||++++...+..++|||+.||+++|+ +.....+++++.
T Consensus 248 ~~~~~~~~~~~----~~~~~~~~~~SDH~pF~~-~GIP~l~~i~~~~~~~yHT~~Dt~d~iD------~~tl~~~~~ii~ 316 (330)
T 4fai_A 248 VAQRDPTRYFQ----SQAMRSSFIEDDHIPFLR-RNVPILHLIPVPFPSVWHTPDDNASVID------YATTDNLALIIR 316 (330)
T ss_dssp -------CCEE----EEEETTCCCCSTTHHHHT-TTCCEEEECCSSCCTTTTSTTSSGGGCC------HHHHHHHHHHHH
T ss_pred ccccccccccc----ccCCCCCCCCCchHHHHH-CCCCEEEEECCCCCCCCCCCcCChhhCC------HHHHHHHHHHHH
Confidence 0000000000 001112236799999998 6999999875555679999999999884 344566777777
Q ss_pred HHHH--HhCCC
Q 005260 535 LVAL--QLADE 543 (705)
Q Consensus 535 ~l~~--~La~~ 543 (705)
.+++ .+++.
T Consensus 317 ~Fv~EyL~~~~ 327 (330)
T 4fai_A 317 LFALEYLLAGT 327 (330)
T ss_dssp HHHHHHHTC--
T ss_pred HHHHHHHhhCC
Confidence 7664 35554
No 7
>4fuu_A Leucine aminopeptidase; phosphorylase/hydrolase like fold, peptidase family M28, STR genomics, joint center for structural genomics; 1.30A {Bacteroides thetaiotaomicron}
Probab=99.96 E-value=4.1e-29 Score=265.91 Aligned_cols=188 Identities=23% Similarity=0.261 Sum_probs=138.6
Q ss_pred eeeeEEEEecCCCCCCcEEEEeeccCCcC---------------CCCCCChhHHHHHHHHHHHHHHhHHcCCCCCCcEEE
Q 005260 323 TIQNVIGIIPGTEEPDRLVILGNHRDAWT---------------FGAVDPNSGTAALLEVAQRLNKLQKRGWKPRRTIVL 387 (705)
Q Consensus 323 ~~~NVia~i~G~~~p~~~ViigaH~Ds~~---------------~GA~DnaSG~A~lLElAr~l~~l~~~g~~p~rtI~F 387 (705)
+..||||+++|.. +++|||+|||||++ .||+||+||||+|||+||.|++. +|+|+|+|
T Consensus 81 ~~~Nii~~~~g~~--~~~i~l~aH~Ds~~~~~~~~~~~~~~~~~~GA~D~aSG~a~lLE~ar~l~~~-----~~~~~i~~ 153 (309)
T 4fuu_A 81 KARNIIGSYKPES--KKRIALFAHWDTRPWADNDADEKNHHTPILGANDGASGVGALLEIARLVNQQ-----QPELGIDI 153 (309)
T ss_dssp EEEEEEEEESTTC--SSEEEEEEECCCCSCCTTCSSGGGTTSCCCCTTTTHHHHHHHHHHHHHHHHS-----CCSSEEEE
T ss_pred eeEEEEEEECCCC--CceEEEEeecCCCCCCCCccccccccCCcCCcccCchhHHHHHHHHHHHhhc-----CCCCceEE
Confidence 4679999999975 68999999999974 39999999999999999999864 89999999
Q ss_pred EEeCCccCCC--------------CChHHHHHHHHHhhhccEEEEEEccCcccC-Cccccc-----cChhHHHHHHHHHH
Q 005260 388 CNWDAEEYGL--------------IGSTEWVEENREMLASRAVAYLNIDSAVHE-AGFHAS-----ATPQLDELLKQAAK 447 (705)
Q Consensus 388 v~~~~EE~Gl--------------~GS~~~~~~~~~~l~~~~va~iNlD~~g~g-~~l~~~-----~sp~l~~l~~~~~~ 447 (705)
++|+|||.|+ +||++|++++... ..+++++||+||+|.+ ..+... ..+.+.+.+.+.++
T Consensus 154 ~~~~~EE~Gl~~~~~~~~~~~~~l~GS~~~~~~~~~~-~~~i~~~inlDmvG~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (309)
T 4fuu_A 154 IFLDAEDYGTPQFYEGKHKEEAWCLGSQYWSRNPHVQ-GYNARFGILLDMVGGENSVFLKEGYSEEFAPDINKKVWKAAK 232 (309)
T ss_dssp EEECSSSCCCCTTCCSCCCGGGSCHHHHHHHHSCSST-TCCCSEEEEECSCCBTTCCEEECHHHHHHCHHHHHHHHHHHH
T ss_pred EeecccccCccccccchhhhhhhhcchhHHHhccccc-CcceEEEEeeeccCCCCCceEeecCchhhhHHHHHHHHHHHH
Confidence 9999999995 7999999876543 5789999999999876 333222 12333333444433
Q ss_pred HcCCCCCCccchhhccccCCCCCccccCCCCCCchHHHHhcCCceEEEeeeC----CCCCCCCCCccchHHHHhhCCcch
Q 005260 448 QVQDPDNSSQTIYDSWTGSSNSPVIGRLGGGGSDYAAFIQHIGVPVADMSFG----TGYPVYHSMYDDFIWMEKFGDPTF 523 (705)
Q Consensus 448 ~v~~p~~~~~~l~~~~~~~~~~~~~~~~g~~~SD~~~F~~~~GIPs~~l~~~----~~~p~yHt~~Dt~~~l~~~~dp~~ 523 (705)
...... .+ .....+..+|||.||.++.|||++++.+. +.+++|||++||+++| |+
T Consensus 233 ~~~~~~-----~~----------~~~~~~~~~sDh~~F~~~~GIP~l~~~~~~~~~~~~~~yHT~~Dt~d~i----d~-- 291 (309)
T 4fuu_A 233 KAGYGK-----TF----------IDERGDTITDDHLFINRLARIKTIDIIPNDPETGFPPTWHTIHDNMDHI----DK-- 291 (309)
T ss_dssp HTTCTT-----TE----------EEEECCCCCCHHHHHHHHTCCCEEEECBC----CCCTTTTSTTCSGGGB----CH--
T ss_pred hcCCcc-----cc----------cccCCCCCCCChHHHHhcCCCCEEEEeccCCCCCCCCCCCCcccchhhC----CH--
Confidence 321100 00 00111226799999997679999998653 2467999999999987 33
Q ss_pred HHHHHHHHHHHHHHHH
Q 005260 524 QRHVAAASMWGLVALQ 539 (705)
Q Consensus 524 ~~~~~~a~~~~~l~~~ 539 (705)
..++.+++++..+++.
T Consensus 292 ~~L~~vg~~vl~~ly~ 307 (309)
T 4fuu_A 292 NTLKAVGQTVLEVIYN 307 (309)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhh
Confidence 4456677777777663
No 8
>2afw_A Glutaminyl-peptide cyclotransferase; alpha-beta protein, metalloprotein; HET: AHN; 1.56A {Homo sapiens} SCOP: c.56.5.8 PDB: 2afo_A 2afm_A* 2afx_A* 2afz_A 3pbb_A* 2zed_A 2zeh_A 2afu_A 2zee_A 2zeo_A 2zef_A 2zem_A 2zel_A 2zen_A 3pbe_A 2zeg_A 2zep_A 2afs_A 3si0_A* 3si2_A* ...
Probab=99.95 E-value=1.9e-27 Score=255.21 Aligned_cols=205 Identities=20% Similarity=0.209 Sum_probs=145.5
Q ss_pred eeeeeEEEEecCCCCCCcEEEEeeccCCcC---------CCCCCChhHHHHHHHHHHHHHHhHHc-----CCCCCCcEEE
Q 005260 322 ATIQNVIGIIPGTEEPDRLVILGNHRDAWT---------FGAVDPNSGTAALLEVAQRLNKLQKR-----GWKPRRTIVL 387 (705)
Q Consensus 322 ~~~~NVia~i~G~~~p~~~ViigaH~Ds~~---------~GA~DnaSG~A~lLElAr~l~~l~~~-----g~~p~rtI~F 387 (705)
.+..||||+++|. +++.||++||+||++ .||+||++|+|+|||+||.|.+..+. |++|+|+|+|
T Consensus 86 ~~~~Nvi~~~~g~--~~~~i~l~aH~Dsv~~~~~~~~~~~Ga~D~~sGva~~le~ar~l~~~~~~~~~~~g~~~~~~i~~ 163 (329)
T 2afw_A 86 RSFSNIISTLNPT--AKRHLVLACHYDSKYFSHWNNRVFVGATDSAVPCAMMLELARALDKKLLSLKTVSDSKPDLSLQL 163 (329)
T ss_dssp EEEEEEEEESSTT--SSEEEEEEEECCCCCCCCBTTBCCCCTTTTHHHHHHHHHHHHHTHHHHHTTC------CCEEEEE
T ss_pred ceEeEEEEEECCC--CCcEEEEEEeccCCCcCcccCcCCCCcccchhhHHHHHHHHHHHHHHHhhhcccccCCCCccEEE
Confidence 4689999999996 478999999999954 59999999999999999999886432 5789999999
Q ss_pred EEeCCccC--------CCCChHHHHHHHHHh----------hhccEEEEEEccCcccC-Cccc--cccChhHHHHHHHHH
Q 005260 388 CNWDAEEY--------GLIGSTEWVEENREM----------LASRAVAYLNIDSAVHE-AGFH--ASATPQLDELLKQAA 446 (705)
Q Consensus 388 v~~~~EE~--------Gl~GS~~~~~~~~~~----------l~~~~va~iNlD~~g~g-~~l~--~~~sp~l~~l~~~~~ 446 (705)
++|++||. |+.||++|++++... +.++++++||+||+|.+ ..+. ...+..+...+.++.
T Consensus 164 ~~~~~EE~~~~~~~~~gl~Gs~~~~~~~~~~~~p~~~~~~~~~~~i~~~inlD~iG~~~~~~~~~~~~~~~~~~~l~~~~ 243 (329)
T 2afw_A 164 IFFDGEEAFLHWSPQDSLYGSRHLAAKMASTPHPPGARGTSQLHGMDLLVLLDLIGAPNPTFPNFFPNSARWFERLQAIE 243 (329)
T ss_dssp EEESCCSCSSSCCSSSSCHHHHHHHHHHHTSBSSTTCSSCBTTTTEEEEEEECSCCSSSCCBCCCCGGGHHHHHHHHHHH
T ss_pred EEecCcccccccCCCccchhHHHHHHHHHhCCCcccccccccccceEEEEEeccCCCCCCceeeeccCcchHHHHHHHHH
Confidence 99999998 999999999887643 35789999999999976 3331 112222333344333
Q ss_pred HHcCCCCC-CccchhhccccCCCCCccccCCCCCCchHHHHhcCCceEEEeeeCCCCCCCCCCccchHHHHhhCCcchHH
Q 005260 447 KQVQDPDN-SSQTIYDSWTGSSNSPVIGRLGGGGSDYAAFIQHIGVPVADMSFGTGYPVYHSMYDDFIWMEKFGDPTFQR 525 (705)
Q Consensus 447 ~~v~~p~~-~~~~l~~~~~~~~~~~~~~~~g~~~SD~~~F~~~~GIPs~~l~~~~~~p~yHt~~Dt~~~l~~~~dp~~~~ 525 (705)
+.+..... ...+.+..|+.. ....+..+|||.||++ .|||++++.....+++|||++||+++|+ +..
T Consensus 244 ~~~~~~g~~~~~~~~~~~f~~-----~~~~g~~~sDh~~F~~-~GiP~~~~~~~~~~~~yHt~~Dt~~~ld------~~~ 311 (329)
T 2afw_A 244 HELHELGLLKDHSLEGRYFQN-----YSYGGVIQDDHIPFLR-RGVPVLHLIPSPFPEVWHTMDDNEENLD------EST 311 (329)
T ss_dssp HHHHHTTCSSSCCSTTCSBCS-----CCCCSCCCSTTHHHHT-TTCCEEEECCSSCCTTTTSTTCSSTTCC------HHH
T ss_pred HHHHHcCCccCCCcccccccc-----cccCCCCCCCCHhHHH-CCCCEEEEEcCCCCCCCCCCCCchhhCC------HHH
Confidence 32211100 011222223211 0111225799999999 5999999987666689999999999873 445
Q ss_pred HHHHHHHHHHHHHHh
Q 005260 526 HVAAASMWGLVALQL 540 (705)
Q Consensus 526 ~~~~a~~~~~l~~~L 540 (705)
+..+++++..++++.
T Consensus 312 l~~~~~~~~~~v~ey 326 (329)
T 2afw_A 312 IDNLNKILQVFVLEY 326 (329)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 667777777776653
No 9
>3pb6_X Glutaminyl-peptide cyclotransferase-like protein; alpha/beta protein, alpha/beta-mixed fold, glutaminyl cyclas membrane; 1.05A {Homo sapiens} PDB: 3pb4_X 3pb7_X* 3pb8_X* 3pb9_X*
Probab=99.95 E-value=2.6e-27 Score=252.86 Aligned_cols=205 Identities=20% Similarity=0.176 Sum_probs=146.6
Q ss_pred eeeeeeEEEEecCCCCCCcEEEEeeccCCcC--------CCCCCChhHHHHHHHHHHHHHHhHHc--CCCCCCcEEEEEe
Q 005260 321 MATIQNVIGIIPGTEEPDRLVILGNHRDAWT--------FGAVDPNSGTAALLEVAQRLNKLQKR--GWKPRRTIVLCNW 390 (705)
Q Consensus 321 ~~~~~NVia~i~G~~~p~~~ViigaH~Ds~~--------~GA~DnaSG~A~lLElAr~l~~l~~~--g~~p~rtI~Fv~~ 390 (705)
..++.||||+++|.. ++.||++||+||.. .||+||+||||+|||+||.|.+..+. +.+|+|+|+|++|
T Consensus 93 ~~~~~Nvia~~~g~~--~~~ivl~aH~Dsv~~~~g~~~~~GA~D~asGva~lLe~ar~l~~~~~~~~~~~~~~~i~fv~~ 170 (330)
T 3pb6_X 93 PVDFGNVVATLDPRA--ARHLTLACHYDSKLFPPGSTPFVGATDSAVPCALLLELAQALDLELSRAKKQAAPVTLQLLFL 170 (330)
T ss_dssp EEEEEEEEEESCTTS--SEEEEEEEECCCCCCCTTSCCCCCTTTTHHHHHHHHHHHHHTHHHHHHHHHTTCSEEEEEEEE
T ss_pred CccceEEEEEECCCC--CceEEEEeccCCCCCCCCCcCcCCCcCChHHHHHHHHHHHHHHHHHhhcccCCCCCcEEEEEE
Confidence 467899999999975 68999999999954 49999999999999999999886432 3589999999999
Q ss_pred CCccC--------CCCChHHHHHHHHHh-------hhccEEEEEEccCcccC-Cccc--cccChhHHHHHHHHHHHcCCC
Q 005260 391 DAEEY--------GLIGSTEWVEENREM-------LASRAVAYLNIDSAVHE-AGFH--ASATPQLDELLKQAAKQVQDP 452 (705)
Q Consensus 391 ~~EE~--------Gl~GS~~~~~~~~~~-------l~~~~va~iNlD~~g~g-~~l~--~~~sp~l~~l~~~~~~~v~~p 452 (705)
+|||. |++||++|++++... ..+++.++||+||+|.. ..+. ...+..+...+.+..+.+..-
T Consensus 171 ~~EE~f~~w~~~~gl~GS~~~a~~~~~~~~~~~~~~~~~i~~~inlDmiG~~~~~~~~~~~~t~~~~~~l~~i~~~~~~~ 250 (330)
T 3pb6_X 171 DGEEALKEWGPKDSLYGSRHLAQLMESIPHSPGPTRIQAIELFMLLDLLGAPNPTFYSHFPRTVRWFHRLRSIEKRLHRL 250 (330)
T ss_dssp SCCSCSSCCSTTSSCHHHHHHHHHHHHSBCSSCSBTTTTEEEEEEEESCSSSSCCBCCCCGGGHHHHHHHHHHHHHHHHT
T ss_pred cCcccccccCCCCCCccHHHHHHHHHhcCCccccchhhCeEEEEeccCCCCCCCCceeecCcchHHHHHHHHHHHHHHHc
Confidence 99999 999999999876652 45799999999999986 3331 122322222333222211000
Q ss_pred CC-CccchhhccccCCCCCccccCCCCCCchHHHHhcCCceEEEeeeCCCCCCCCCCccchHHHHhhCCcchHHHHHHHH
Q 005260 453 DN-SSQTIYDSWTGSSNSPVIGRLGGGGSDYAAFIQHIGVPVADMSFGTGYPVYHSMYDDFIWMEKFGDPTFQRHVAAAS 531 (705)
Q Consensus 453 ~~-~~~~l~~~~~~~~~~~~~~~~g~~~SD~~~F~~~~GIPs~~l~~~~~~p~yHt~~Dt~~~l~~~~dp~~~~~~~~a~ 531 (705)
.. ........++. + ....+..+|||.||++ .|||++++......++|||+.||+++|+ +..+..+++
T Consensus 251 g~~~~~p~~~~~f~----~-~~~~~~~~SDH~pF~~-~GIP~~~~~~~~f~~~yHt~~Dt~d~id------~~~l~~~~~ 318 (330)
T 3pb6_X 251 NLLQSHPQEVMYFQ----P-GEPFGSVEDDHIPFLR-RGVPVLHLISTPFPAVWHTPADTEVNLH------PPTVHNLCR 318 (330)
T ss_dssp TCCSSCCSSCSSBC----S-SCSSCCCSCTTHHHHT-TTCCEEEEECSSCCTTTTSTTCSGGGSC------HHHHHHHHH
T ss_pred CccccCCccccccc----c-cccCCCCCCchHhHHH-CCCCEEEEEcCCCCCCCCCCcCchhhCC------HHHHHHHHH
Confidence 00 00000001111 0 0123347899999998 7999999986554579999999999884 556777888
Q ss_pred HHHHHHHH
Q 005260 532 MWGLVALQ 539 (705)
Q Consensus 532 ~~~~l~~~ 539 (705)
++..++++
T Consensus 319 i~~~fv~E 326 (330)
T 3pb6_X 319 ILAVFLAE 326 (330)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 88877765
No 10
>1tkj_A Aminopeptidase, SGAP; double-zinc metalloproteinase, calcium activation, protein- inhibitor complex, hydrolase; HET: MED; 1.15A {Streptomyces griseus} SCOP: c.56.5.4 PDB: 1f2o_A 1f2p_A* 1cp7_A 1qq9_A* 1tf9_A* 1tf8_A* 1tkh_A* 1tkf_A* 1xbu_A* 1xjo_A
Probab=99.94 E-value=9.7e-27 Score=244.67 Aligned_cols=197 Identities=29% Similarity=0.423 Sum_probs=155.4
Q ss_pred eeeeEEEEecCCCCCCcEEEEeeccCCcCC--CCCCChhHHHHHHHHHHHHHHhHHcCCCCCCcEEEEEeCCccCCCCCh
Q 005260 323 TIQNVIGIIPGTEEPDRLVILGNHRDAWTF--GAVDPNSGTAALLEVAQRLNKLQKRGWKPRRTIVLCNWDAEEYGLIGS 400 (705)
Q Consensus 323 ~~~NVia~i~G~~~p~~~ViigaH~Ds~~~--GA~DnaSG~A~lLElAr~l~~l~~~g~~p~rtI~Fv~~~~EE~Gl~GS 400 (705)
...||||+++|.. +++.|++++|+|+++. ||.||++|+|++||++|.|.+ .+++|+++|+|++|++||.|+.||
T Consensus 63 ~~~nvi~~~~g~~-~~~~i~l~aH~D~v~~g~Ga~D~~~g~a~~l~~~~~l~~---~~~~~~~~i~~~~~~~EE~g~~Gs 138 (284)
T 1tkj_A 63 TGYNLIANWPGGD-PNKVLMAGAHLDSVSSGAGINDNGSGSAAVLETALAVSR---AGYQPDKHLRFAWWGAEELGLIGS 138 (284)
T ss_dssp EEEEEEEECSCSE-EEEEEEEEEECCCCTTSCCTTTTHHHHHHHHHHHHHHHH---TTCCCSEEEEEEEESCGGGTSHHH
T ss_pred CceeEEEEEeCCC-CCCEEEEEeecCCCCCCCCCccChHHHHHHHHHHHHHHh---cCCCCCceEEEEEECCcccCCcCH
Confidence 4679999999864 4689999999999986 899999999999999999875 467899999999999999999999
Q ss_pred HHHHHHHHHhhhccEEEEEEccCcccC-Cccc-cccChhHHHHHHHHHHHcCCCCCCccchhhccccCCCCCccccCCCC
Q 005260 401 TEWVEENREMLASRAVAYLNIDSAVHE-AGFH-ASATPQLDELLKQAAKQVQDPDNSSQTIYDSWTGSSNSPVIGRLGGG 478 (705)
Q Consensus 401 ~~~~~~~~~~l~~~~va~iNlD~~g~g-~~l~-~~~sp~l~~l~~~~~~~v~~p~~~~~~l~~~~~~~~~~~~~~~~g~~ 478 (705)
++|++++...+.+++.++||+|++|.+ ..+. ...+|.+...+.+.++...-+. .+...+..
T Consensus 139 ~~~~~~~~~~~~~~~~~~i~~D~~g~~~~~~~~~~~~~~l~~~~~~~~~~~gi~~-----------------~~~~~~~~ 201 (284)
T 1tkj_A 139 KFYVNNLPSADRSKLAGYLNFDMIGSPNPGYFVYDDDPVIEKTFKNYFAGLNVPT-----------------EIETEGDG 201 (284)
T ss_dssp HHHHHHSCHHHHTTEEEEEEECCCCCSSCCCEECCSSHHHHHHHHHHHHHHTCCC-----------------EECCSSTT
T ss_pred HHHHhhCccchhhcEEEEEEecCCCCCCCCeEEecCCHHHHHHHHHHHHHcCCCc-----------------ccCCCCCC
Confidence 999998776666899999999999875 2333 2357888888877766542211 11122226
Q ss_pred CCchHHHHhcCCceEEEeeeCC-------------------CCCCCCCCccchHHHHhhCCcchHHHHHHHHHHHHHHHH
Q 005260 479 GSDYAAFIQHIGVPVADMSFGT-------------------GYPVYHSMYDDFIWMEKFGDPTFQRHVAAASMWGLVALQ 539 (705)
Q Consensus 479 ~SD~~~F~~~~GIPs~~l~~~~-------------------~~p~yHt~~Dt~~~l~~~~dp~~~~~~~~a~~~~~l~~~ 539 (705)
+|||.+|.+ .|||++.+.... .+++|||++||+++++ +..+..++++++.++++
T Consensus 202 ~sD~~~f~~-~Gip~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~yHt~~D~~~~id------~~~l~~~~~~~~~~~~~ 274 (284)
T 1tkj_A 202 RSDHAPFKN-VGVPVGGLFTGAGYTKSAAQAQKWGGTAGQAFDRCYHSSCDSLSNIN------DTALDRNSDAAAHAIWT 274 (284)
T ss_dssp CSTHHHHHH-TTCCEEEEECCCSSBCCHHHHHHHCSCTTSBSCTTTTSTTCSTTSCC------HHHHHHHHHHHHHHHHH
T ss_pred CCchHHHHH-CCCCEEEeecCcccccccchhhccccccccCCCCCCCCCcCChhhCC------HHHHHHHHHHHHHHHHH
Confidence 799999997 799999997651 2578999999988763 45567889999999999
Q ss_pred hCCCCCCC
Q 005260 540 LADEEFLP 547 (705)
Q Consensus 540 La~~~~lP 547 (705)
||+++.+|
T Consensus 275 la~~~~~P 282 (284)
T 1tkj_A 275 LSSGTGEP 282 (284)
T ss_dssp HHC-----
T ss_pred HhcCCCCC
Confidence 99999887
No 11
>3tc8_A Leucine aminopeptidase; phosphorylase/hydrolase-like, structural genomics, joint CEN structural genomics, JCSG; 1.06A {Parabacteroides distasonis}
Probab=99.94 E-value=5e-27 Score=249.27 Aligned_cols=189 Identities=23% Similarity=0.238 Sum_probs=141.9
Q ss_pred eeeeeEEEEecCCCCCCcEEEEeeccCCcC---------------CCCCCChhHHHHHHHHHHHHHHhHHcCCCCCCcEE
Q 005260 322 ATIQNVIGIIPGTEEPDRLVILGNHRDAWT---------------FGAVDPNSGTAALLEVAQRLNKLQKRGWKPRRTIV 386 (705)
Q Consensus 322 ~~~~NVia~i~G~~~p~~~ViigaH~Ds~~---------------~GA~DnaSG~A~lLElAr~l~~l~~~g~~p~rtI~ 386 (705)
....||||+++|.. ++.||++||+|||+ .||+||++|+|+|||+||.|.+. +|+|+|+
T Consensus 80 ~~~~Nvia~~~g~~--~~~ill~aH~Dsv~~~~~~p~~~~~~~~~~Ga~D~~sGva~~Le~ar~l~~~-----~~~~~i~ 152 (309)
T 3tc8_A 80 LEARNIIGSFDPEN--SKRVLLFAHWDSRPYSDHDPDPSKHRTPLDGADDGGSGVGALLEIARQIGQK-----APGIGID 152 (309)
T ss_dssp EEEEEEEEEESTTC--SSEEEEEEECCCCSCCTTCSSGGGTTSCCCCTTTTHHHHHHHHHHHHHHHHS-----CCSSEEE
T ss_pred ccceEEEEEECCCC--CceEEEEecccCCCCCCCCccccCCCccccCcccchHhHHHHHHHHHHHHhC-----CCCCcEE
Confidence 46799999999963 68999999999997 49999999999999999999875 5899999
Q ss_pred EEEeCCccCCC-------------CChHHHHHHHHHhhhccEEEEEEccCcccC-Ccccccc--C---hhHHHHHHHHHH
Q 005260 387 LCNWDAEEYGL-------------IGSTEWVEENREMLASRAVAYLNIDSAVHE-AGFHASA--T---PQLDELLKQAAK 447 (705)
Q Consensus 387 Fv~~~~EE~Gl-------------~GS~~~~~~~~~~l~~~~va~iNlD~~g~g-~~l~~~~--s---p~l~~l~~~~~~ 447 (705)
|++|++||.|+ +||++|++++... ..+++++||+||+|.+ ..+...+ . +.+.+.+.+.++
T Consensus 153 f~~~~~EE~Gl~~~~~~~~~ds~~~GS~~~~~~~~~~-~~~~~~~inlD~~G~~~~~~~~~~~~~~~~~~l~~~~~~~a~ 231 (309)
T 3tc8_A 153 IIFFDAEDYGTPEFVTDYTPDSWCLGTQFWAKNPHVP-NYTAEYGILLDMVGGKNATFFKEQQSLRAAAPIVEMVWSAAR 231 (309)
T ss_dssp EEEECSCSCSCCTTCCSCCTTCSCHHHHHHHHSCSST-TCCCSEEEEEESCCBTTCCEEECHHHHHHHHHHHHHHHHHHH
T ss_pred EEEECccccccccccccccccccchhHHHHHhCCCcc-ccceEEEEEecccCCCCCceeecccccchHHHHHHHHHHHHH
Confidence 99999999999 9999999865433 5789999999999986 4443321 1 222333334343
Q ss_pred HcCCCCCCccchhhccccCCCCCccccCCCCCCchHHHHhcCCceEEEeeeC------CCCCCCCCCccchHHHHhhCCc
Q 005260 448 QVQDPDNSSQTIYDSWTGSSNSPVIGRLGGGGSDYAAFIQHIGVPVADMSFG------TGYPVYHSMYDDFIWMEKFGDP 521 (705)
Q Consensus 448 ~v~~p~~~~~~l~~~~~~~~~~~~~~~~g~~~SD~~~F~~~~GIPs~~l~~~------~~~p~yHt~~Dt~~~l~~~~dp 521 (705)
.+..+ ..|. ....+..+|||.||.+..|||++++... ...++|||+.||+++|+
T Consensus 232 ~~g~~-----~~f~----------~~~~g~~~sDh~~f~~~~GiP~~~li~~~~~~~~~~~~~~Ht~~Dt~d~id----- 291 (309)
T 3tc8_A 232 DLGYG-----KYFI----------NAAGGAITDDHQYVISGRNIPSIDIINYDPESKTGFASYWHTQKDNMENID----- 291 (309)
T ss_dssp HHTCT-----TTEE----------EEECCCCCCHHHHHHHHHCCCEEEEEBCCTTSSSSSCTTTTSTTCSGGGBC-----
T ss_pred HcCCc-----ceec----------cCCCCCCCCccHHHHhcCCCCEEEEecccCcccCCCCCCCCCCcCChhhCC-----
Confidence 33211 1110 0112236899999998349999998653 23479999999999884
Q ss_pred chHHHHHHHHHHHHHHHH
Q 005260 522 TFQRHVAAASMWGLVALQ 539 (705)
Q Consensus 522 ~~~~~~~~a~~~~~l~~~ 539 (705)
+..+..+++++..++++
T Consensus 292 -~~~l~~~~~~~~~~vy~ 308 (309)
T 3tc8_A 292 -RETLKAAGQTVLEVIYN 308 (309)
T ss_dssp -HHHHHHHHHHHHHHHHH
T ss_pred -HHHHHHHHHHHHHHHhc
Confidence 45677788888888775
No 12
>3gux_A Putative Zn-dependent exopeptidase; aminopeptidase, phosphorylase/hydrolase-like fold, structura genomics; 1.80A {Bacteroides vulgatus atcc 8482}
Probab=99.94 E-value=8.4e-27 Score=247.70 Aligned_cols=189 Identities=20% Similarity=0.214 Sum_probs=125.9
Q ss_pred eeeeeEEEEecCCCCCCcEEEEeeccCCcC---------------CCCCCChhHHHHHHHHHHHHHHhHHcCCCCCCcEE
Q 005260 322 ATIQNVIGIIPGTEEPDRLVILGNHRDAWT---------------FGAVDPNSGTAALLEVAQRLNKLQKRGWKPRRTIV 386 (705)
Q Consensus 322 ~~~~NVia~i~G~~~p~~~ViigaH~Ds~~---------------~GA~DnaSG~A~lLElAr~l~~l~~~g~~p~rtI~ 386 (705)
....||||+++|.. ++.|||+||+|||+ .||+||++|+|+|||+||.|.+. +|+|+|+
T Consensus 82 ~~~~Nvia~~~g~~--~~~ill~aH~Dsv~~~~~~p~~~~~~~~~~GA~D~~sGva~~Le~ar~l~~~-----~~~~~i~ 154 (314)
T 3gux_A 82 LKSRNIIGAYKPES--KKRILLCAHWDSRPYADNDPDPKNHHTPILGVNDGASGVGVLLEIARQIQKE-----QPALGID 154 (314)
T ss_dssp EEEEEEEEEESTTC--SSEEEEEEECCCCC--------------------CHHHHHHHHHHHHHHHHS-----CCSSEEE
T ss_pred ccceEEEEEECCCC--CceEEEEccccCCCcCCCCcccccCCcccCCCcccHHHHHHHHHHHHHHHhC-----CCCCcEE
Confidence 46799999999963 68999999999996 39999999999999999999875 5899999
Q ss_pred EEEeCCccCCC--------------CChHHHHHHHHHhhhccEEEEEEccCcccC-CccccccC-----hhHHHHHHHHH
Q 005260 387 LCNWDAEEYGL--------------IGSTEWVEENREMLASRAVAYLNIDSAVHE-AGFHASAT-----PQLDELLKQAA 446 (705)
Q Consensus 387 Fv~~~~EE~Gl--------------~GS~~~~~~~~~~l~~~~va~iNlD~~g~g-~~l~~~~s-----p~l~~l~~~~~ 446 (705)
|++|++||.|+ +||++|++++.. ...+++++||+||+|.. ..+...+. +.+.+.+.+.+
T Consensus 155 fv~~~~EE~Gl~~~~~~~~~~ds~~~GS~~~~~~~~~-~~~~~~~~inlDm~G~~~~~~~~~g~~~~~~~~l~~~~~~~~ 233 (314)
T 3gux_A 155 IVFFDSEDYGIPEFYDGKYKQDTWCLGSQYWARTPHV-QNYNARYGILLDMVGGKDATFYYEGYSARTARSEMKKIWKKA 233 (314)
T ss_dssp EEEECSCCC-----------CTTSCHHHHHHHHSCSS-TTCCCSEEEEEESCCBTTCCEEECTTHHHHCHHHHHHHHHHH
T ss_pred EEEECCccccccccccccccccccchhHHHHHhCCcc-cccceeEEEEEeccCCCCCceeeeccccccHHHHHHHHHHHH
Confidence 99999999999 999999986543 34789999999999986 44433322 33444444444
Q ss_pred HHcCCCCCCccchhhccccCCCCCccccCCCCCCchHHHHhcCCceEEEeeeCC-------CCCCCCCCccchHHHHhhC
Q 005260 447 KQVQDPDNSSQTIYDSWTGSSNSPVIGRLGGGGSDYAAFIQHIGVPVADMSFGT-------GYPVYHSMYDDFIWMEKFG 519 (705)
Q Consensus 447 ~~v~~p~~~~~~l~~~~~~~~~~~~~~~~g~~~SD~~~F~~~~GIPs~~l~~~~-------~~p~yHt~~Dt~~~l~~~~ 519 (705)
+.+... ..|. ....++.+|||.||.++.|||++++.... ..++|||+.||+++|+
T Consensus 234 ~~~g~~-----~~f~----------~~~~~~~~sDh~pF~~~~GiP~l~~i~~~~~~~~~~f~~~~Ht~~Dt~d~id--- 295 (314)
T 3gux_A 234 HELGYG-----KYFV----------KEDGGETVDDHIYVNKLARIPCVDIINYDAGNPQSSFGSFWHTVNDTMENID--- 295 (314)
T ss_dssp HHHTCT-----TTEE----------EEECCCCCCHHHHHHHHSCCCEEEEEBCC--------------------CBC---
T ss_pred HHcCCc-----cccc----------cccCCCCCCccHHHHhcCCCceEEEecccccccccCCCCCCCCCcCcchhCC---
Confidence 443211 1111 01122367999999983599999996531 2379999999999884
Q ss_pred CcchHHHHHHHHHHHHHHHH
Q 005260 520 DPTFQRHVAAASMWGLVALQ 539 (705)
Q Consensus 520 dp~~~~~~~~a~~~~~l~~~ 539 (705)
+..+..+++++..++++
T Consensus 296 ---~~~l~~~~~~~~~~~y~ 312 (314)
T 3gux_A 296 ---RNTLKAVGQTVMDVIYN 312 (314)
T ss_dssp ---HHHHHHHHHHHHHHHHT
T ss_pred ---HHHHHHHHHHHHHHHhh
Confidence 55677788888888775
No 13
>1rtq_A Bacterial leucyl aminopeptidase; bimetallic, zinc, high resolution, hydrolase; 0.95A {Vibrio proteolyticus} SCOP: c.56.5.4 PDB: 1txr_A* 1xry_A* 2dea_A 2nyq_A 3fh4_A 3vh9_A* 1lok_A 1cp6_A 1ft7_A* 1igb_A* 1amp_A 2iq6_A 2prq_A 3b3v_A 3b3w_A 3b7i_A* 3b3t_A 3b35_A 3b3c_A* 3b3s_A ...
Probab=99.94 E-value=3.2e-26 Score=242.44 Aligned_cols=202 Identities=24% Similarity=0.290 Sum_probs=157.6
Q ss_pred eeeeeEEEEecCCCCCCcEEEEeeccCCcC----------CCCCCChhHHHHHHHHHHHHHHhHHcCCCCCCcEEEEEeC
Q 005260 322 ATIQNVIGIIPGTEEPDRLVILGNHRDAWT----------FGAVDPNSGTAALLEVAQRLNKLQKRGWKPRRTIVLCNWD 391 (705)
Q Consensus 322 ~~~~NVia~i~G~~~p~~~ViigaH~Ds~~----------~GA~DnaSG~A~lLElAr~l~~l~~~g~~p~rtI~Fv~~~ 391 (705)
....||||+++|...+++.|++++|+|+++ .||.||++|+|++||++|.|.+ .+++|+++|+|++|+
T Consensus 73 ~~~~nvi~~~~g~~~~~~~v~l~aH~D~v~~~~~~~~~~~~Ga~D~~~g~a~~l~~~~~l~~---~~~~~~~~i~~~~~~ 149 (299)
T 1rtq_A 73 YNQKSVVMTITGSEAPDEWIVIGGHLDSTIGSHTNEQSVAPGADDDASGIAAVTEVIRVLSE---NNFQPKRSIAFMAYA 149 (299)
T ss_dssp EEEEEEEEEECCSSEEEEEEEEEEECCCCSSTTCCTTCCCCCTTTTHHHHHHHHHHHHHHHH---TTCCCSEEEEEEEES
T ss_pred CCCceEEEEEECCCCCCCEEEEEeccccCCCcCcCCCcccCCCcccHHHHHHHHHHHHHHHH---cCCCCCceEEEEEEC
Confidence 356899999999754468999999999963 5999999999999999999875 467899999999999
Q ss_pred CccCCCCChHHHHHHHHHhhhccEEEEEEccCccc-C--Ccccc---ccChhHHHHHHHHHHHcCCCCCCccchhhcccc
Q 005260 392 AEEYGLIGSTEWVEENREMLASRAVAYLNIDSAVH-E--AGFHA---SATPQLDELLKQAAKQVQDPDNSSQTIYDSWTG 465 (705)
Q Consensus 392 ~EE~Gl~GS~~~~~~~~~~l~~~~va~iNlD~~g~-g--~~l~~---~~sp~l~~l~~~~~~~v~~p~~~~~~l~~~~~~ 465 (705)
+||.|+.||++|++++... .++++++||+||++. | ..+.+ ..++.+..++.+.++... |.-
T Consensus 150 ~EE~g~~Gs~~~~~~~~~~-~~~~~~~i~~D~~g~~g~~~~i~~~~~~~~~~l~~~l~~~a~~~~-~~i----------- 216 (299)
T 1rtq_A 150 AEEVGLRGSQDLANQYKSE-GKNVVSALQLDMTNYKGSAQDVVFITDYTDSNFTQYLTQLMDEYL-PSL----------- 216 (299)
T ss_dssp CGGGTSHHHHHHHHHHHHT-TCEEEEEEECSCCSCCCSSSSEEEECTTSCHHHHHHHHHHHHHHC-TTC-----------
T ss_pred CccCCchhHHHHHHhhhhc-cccEEEEEEecCCCCCCCCcceEEEeCCCCchHHHHHHHHHHHhC-ccC-----------
Confidence 9999999999999987764 478999999999875 2 22222 235677777777766531 110
Q ss_pred CCCCCccccCCCCCCchHHHHhcCCceEEEeeeC---CCCCCCCCCccchHHHHhhCCcchHHHHHHHHHHHHHHHHhCC
Q 005260 466 SSNSPVIGRLGGGGSDYAAFIQHIGVPVADMSFG---TGYPVYHSMYDDFIWMEKFGDPTFQRHVAAASMWGLVALQLAD 542 (705)
Q Consensus 466 ~~~~~~~~~~g~~~SD~~~F~~~~GIPs~~l~~~---~~~p~yHt~~Dt~~~l~~~~dp~~~~~~~~a~~~~~l~~~La~ 542 (705)
...+...+.++|||.+|.+ .|||++.+... ...++|||+.||++++ |+.+..+..+++++..++++||+
T Consensus 217 ---~~~~~~~~~~~sD~~~f~~-~GiP~~~~~~~~~~~~~~~yHt~~Dt~~~~----d~~~~~~~~~~~l~~~~~~~La~ 288 (299)
T 1rtq_A 217 ---TYGFDTCGYACSDHASWHN-AGYPAAMPFESKFNDYNPRIHTTQDTLANS----DPTGSHAKKFTQLGLAYAIEMGS 288 (299)
T ss_dssp ---CEEEECCSSCCSTHHHHHH-TTCCEECEESSCGGGSCTTTTSTTCCGGGS----CTTCHHHHHHHHHHHHHHHHHHH
T ss_pred ---CcccCCCCCCCCcHHHHHH-CCCCEEEecccccccCCCCCCCcccccccc----CccHHHHHHHHHHHHHHHHHHhC
Confidence 0011222236899999998 79999877532 1347999999999876 77778889999999999999999
Q ss_pred CCCCC
Q 005260 543 EEFLP 547 (705)
Q Consensus 543 ~~~lP 547 (705)
.+++.
T Consensus 289 ~~~~~ 293 (299)
T 1rtq_A 289 ATGDT 293 (299)
T ss_dssp CCC--
T ss_pred CCcCC
Confidence 88753
No 14
>3k9t_A Putative peptidase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2, aminop hydrolase; 2.37A {Clostridium acetobutylicum}
Probab=99.89 E-value=1.1e-22 Score=217.80 Aligned_cols=194 Identities=18% Similarity=0.173 Sum_probs=137.0
Q ss_pred EEEEEeeeeeeeeeeeEEEE--ecCCCCCCcEEEEeeccCCcCCCCCCChhHHHHHHHHHHHHHHhHHcCCCCCCcEEEE
Q 005260 311 VNLSYTGEYVMATIQNVIGI--IPGTEEPDRLVILGNHRDAWTFGAVDPNSGTAALLEVAQRLNKLQKRGWKPRRTIVLC 388 (705)
Q Consensus 311 v~l~~~~~~~~~~~~NVia~--i~G~~~p~~~ViigaH~Ds~~~GA~DnaSG~A~lLElAr~l~~l~~~g~~p~rtI~Fv 388 (705)
.++.+++.... ....+++ |+|.. ++.|+++||+||. .+|+||+||+|+++|+||.|++. +|++|++|+
T Consensus 154 y~V~IdS~l~~--G~l~y~e~~ipG~t--~~~IllsaH~cHP-~~ANDNaSG~a~lleLar~l~~~-----~~~~t~rFv 223 (435)
T 3k9t_A 154 YEVVIDSSLED--GSLTYGEYYIRGEL--EEEILLTTYTCHP-SMCNDNLSGVALITFIAKALSKL-----KTKYSYRFL 223 (435)
T ss_dssp EEEEEEEEEES--CEEEEEEEEECCSS--SCEEEEEEECCCC-SCTTTTHHHHHHHHHHHHHHTTS-----CCSSEEEEE
T ss_pred EEEEEeeeecC--CceEEEEEEecCCC--CCEEEEEEEcCCC-CCCCccchHHHHHHHHHHHHhcC-----CCCceEEEE
Confidence 44555554433 3333333 59965 6899999999984 48999999999999999998753 689999999
Q ss_pred EeCCccCCCCChHHHHHHHHHhhhccEEEEEEccCcccCCccccccCh----hHHHHHHHHHHHcCCCCCCccchhhccc
Q 005260 389 NWDAEEYGLIGSTEWVEENREMLASRAVAYLNIDSAVHEAGFHASATP----QLDELLKQAAKQVQDPDNSSQTIYDSWT 464 (705)
Q Consensus 389 ~~~~EE~Gl~GS~~~~~~~~~~l~~~~va~iNlD~~g~g~~l~~~~sp----~l~~l~~~~~~~v~~p~~~~~~l~~~~~ 464 (705)
||+ |++||..|++++...+ +++++.||+||+|.+..+....++ ....++..+++.. .+. ...+
T Consensus 224 f~p----g~iGS~~yl~~~~~~l-~~i~a~lnLDmVGd~~~~~y~~sr~g~~~~d~~~~~vl~~~-~~~---~~~~---- 290 (435)
T 3k9t_A 224 FAP----ETIGSITWLSRNEDKL-KNIKMGLVATCVGDAGIKNYKRTKFGDAEIDKIVEKVLMHC-GSE---YYVA---- 290 (435)
T ss_dssp EEC----TTHHHHHHHHHCGGGG-GGEEEEEECCSCCSSSCEEEECCTTSSSHHHHHHHHHHHHS-SSC---EEEE----
T ss_pred EcC----ccHHHHHHHHhChHhh-hceEEEEEEEEecCCCCceeecCCCCChHHHHHHHHHHhhc-CCC---Ccee----
Confidence 998 7999999999987665 599999999999987544333332 3344444444431 110 1111
Q ss_pred cCCCCCccccCCCCCCchHHHHhcCC--ceEEEeeeC-CCCCCCCCCccchHHHHhhCCcchHHHHHHHHHHHHHHHHhC
Q 005260 465 GSSNSPVIGRLGGGGSDYAAFIQHIG--VPVADMSFG-TGYPVYHSMYDDFIWMEKFGDPTFQRHVAAASMWGLVALQLA 541 (705)
Q Consensus 465 ~~~~~~~~~~~g~~~SD~~~F~~~~G--IPs~~l~~~-~~~p~yHt~~Dt~~~l~~~~dp~~~~~~~~a~~~~~l~~~La 541 (705)
.+...||||.+|.. .| ||++.|..+ ..||.|||+.||++.|+ |. .+...++++..++-.|-
T Consensus 291 ---------~f~~~GSDh~qF~s-pG~dIPv~~~~r~~~~~peYHTs~Dtld~IS----pe--~L~~s~~iv~~~i~~Le 354 (435)
T 3k9t_A 291 ---------DFFPWGSDERQFSS-PGINLSVGSLMRSCYGFDGYHTSADNLCYMN----KD--GLADSYKTYLEVIYTIE 354 (435)
T ss_dssp ---------CCCSCSSTHHHHTS-TTTCCCEEEEESSCTTCTTTTBTTSSGGGCC----HH--HHHHHHHHHHHHHHHHH
T ss_pred ---------cCCCCCCcchhHhh-CCCCCCEEEEecCCCCCcccCCCcCChhhCC----HH--HHHHHHHHHHHHHHHhh
Confidence 11126799999998 69 999998764 23789999999999874 33 44555666766665554
Q ss_pred CC
Q 005260 542 DE 543 (705)
Q Consensus 542 ~~ 543 (705)
..
T Consensus 355 ~n 356 (435)
T 3k9t_A 355 NN 356 (435)
T ss_dssp HC
T ss_pred cc
Confidence 43
No 15
>4h2k_A Succinyl-diaminopimelate desuccinylase; DAPE, MCSG, PSI-biology, structural genomics, midwest center structural genomics, hydrolase; 1.84A {Haemophilus influenzae}
Probab=99.31 E-value=5.6e-11 Score=123.39 Aligned_cols=182 Identities=18% Similarity=0.148 Sum_probs=124.0
Q ss_pred eeeEEEEecCCCCCCcEEEEeeccCCcC-----------------------CCCCCChhHHHHHHHHHHHHHHhHHcCCC
Q 005260 324 IQNVIGIIPGTEEPDRLVILGNHRDAWT-----------------------FGAVDPNSGTAALLEVAQRLNKLQKRGWK 380 (705)
Q Consensus 324 ~~NVia~i~G~~~p~~~ViigaH~Ds~~-----------------------~GA~DnaSG~A~lLElAr~l~~l~~~g~~ 380 (705)
..||+|++ |.. .+.|++.+|+|+++ .|+.|+.+|++++|++++.|.+. +.+
T Consensus 51 ~~nv~a~~-g~~--~~~i~l~~H~D~vp~~~~~~w~~~pf~~~~~~g~~~grG~~D~k~g~a~~l~a~~~l~~~---~~~ 124 (269)
T 4h2k_A 51 TLNLWAKH-GTS--EPVIAFAGHTDVVPTGDENQWSSPPFSAEIIDGMLYGRGAADMKGSLAAMIVAAEEYVKA---NPN 124 (269)
T ss_dssp BCEEEEEE-CSS--SCEEEEEEECCBCCCCCGGGCSSCTTSCCEETTEEESTTTTTTHHHHHHHHHHHHHHHHH---CTT
T ss_pred ceEEEEEe-CCC--CCEEEEEeeecccCCCCcccccCCCCCeEEECCEEEeCCcccChHHHHHHHHHHHHHHHh---CCC
Confidence 57999998 653 56899999999864 18999999999999999988764 346
Q ss_pred CCCcEEEEEeCCccCCCC-ChHHHHHHHHHhhhccEEEEEEccCcccC---Ccc-------ccccC-hhHHHHHHHHHHH
Q 005260 381 PRRTIVLCNWDAEEYGLI-GSTEWVEENREMLASRAVAYLNIDSAVHE---AGF-------HASAT-PQLDELLKQAAKQ 448 (705)
Q Consensus 381 p~rtI~Fv~~~~EE~Gl~-GS~~~~~~~~~~l~~~~va~iNlD~~g~g---~~l-------~~~~s-p~l~~l~~~~~~~ 448 (705)
++++|+|+++.+||.|.. ||..+++..... ..+..+.|++|..... ..+ ...+. +.+.+.+.++++.
T Consensus 125 ~~~~i~~~~~~~EE~g~~~Ga~~~~~~~~~~-~~~~d~~i~~Ept~~~~~~~~i~~g~~G~G~~~~~~~l~~~l~~aa~~ 203 (269)
T 4h2k_A 125 HKGTIALLITSDEEATAKDGTIHVVETLMAR-DEKITYCMVGEPSSAKNLGDVVKNGRRGGGFLTKPGKLLDSITSAIEE 203 (269)
T ss_dssp CSSEEEEEEESCSSSCCTTSHHHHHHHHHHT-TCCCCEEEECCCCBSSSTTSEEECSCTTCC------HHHHHHHHHHHH
T ss_pred CCccEEEEEEeccccCcccCHHHHHHHHHhc-CCCCCEEEEECCCCCCcCCceeEEecccccccCCCcHHHHHHHHHHHH
Confidence 789999999999999985 999988875443 3456677888754321 101 01122 2466666666654
Q ss_pred -cCCCCCCccchhhccccCCCCCccccCCCCCCchHHHHhcCCceEEEeeeCCCCCCCCCCccchHHHHhhCCcchHHHH
Q 005260 449 -VQDPDNSSQTIYDSWTGSSNSPVIGRLGGGGSDYAAFIQHIGVPVADMSFGTGYPVYHSMYDDFIWMEKFGDPTFQRHV 527 (705)
Q Consensus 449 -v~~p~~~~~~l~~~~~~~~~~~~~~~~g~~~SD~~~F~~~~GIPs~~l~~~~~~p~yHt~~Dt~~~l~~~~dp~~~~~~ 527 (705)
..-+ +.+...| +++|...|.. .|+|++.|.-.. .+.||+.+..+. .-..
T Consensus 204 ~~gi~-----------------~~~~~~g-ggtDa~~~~~-~g~p~~~~~~~~--~~~Hs~~E~v~~---------~d~~ 253 (269)
T 4h2k_A 204 TIGIT-----------------PKAETGG-GTSDGRFIAL-MGAEVVEFGPLN--STIHKVNECVSV---------EDLG 253 (269)
T ss_dssp HHSCC-----------------CEEECC---CHHHHHHHT-TTCEEEECCSBC--TTTTSTTCEEEH---------HHHH
T ss_pred HhCCC-----------------CEEecCC-CCchHHHHHh-hCCCEEEEEeCC--CCCcCCcccccH---------HHHH
Confidence 2111 2223345 7899987765 799999886543 556999876542 2244
Q ss_pred HHHHHHHHHHHHhCC
Q 005260 528 AAASMWGLVALQLAD 542 (705)
Q Consensus 528 ~~a~~~~~l~~~La~ 542 (705)
+.++++..++.+|.+
T Consensus 254 ~~~~ll~~~l~~l~~ 268 (269)
T 4h2k_A 254 KCGEIYHKMLVNLLD 268 (269)
T ss_dssp HHHHHHHHHHHHHC-
T ss_pred HHHHHHHHHHHHHhh
Confidence 667788888887765
No 16
>3t68_A Succinyl-diaminopimelate desuccinylase; DAPE, csgid, metalloenzyme, structural genomics; 1.65A {Vibrio cholerae o1 biovar el tor} PDB: 3t6m_A
Probab=99.25 E-value=1.1e-10 Score=121.05 Aligned_cols=181 Identities=18% Similarity=0.129 Sum_probs=124.4
Q ss_pred eeeEEEEecCCCCCCcEEEEeeccCCcCC-----------------------CCCCChhHHHHHHHHHHHHHHhHHcCCC
Q 005260 324 IQNVIGIIPGTEEPDRLVILGNHRDAWTF-----------------------GAVDPNSGTAALLEVAQRLNKLQKRGWK 380 (705)
Q Consensus 324 ~~NVia~i~G~~~p~~~ViigaH~Ds~~~-----------------------GA~DnaSG~A~lLElAr~l~~l~~~g~~ 380 (705)
..||+|++ |.. .+.|++.+|+|+++. |+.|+.+|++++|++++.|.+. +.+
T Consensus 51 ~~nv~a~~-g~~--~~~i~l~~H~D~vp~~~~~~w~~~pf~~~~~~g~~~g~G~~D~k~g~a~~l~a~~~l~~~---~~~ 124 (268)
T 3t68_A 51 TTNFWARR-GTQ--SPLFVFAGHTDVVPAGPLSQWHTPPFEPTVIDGFLHGRGAADMKGSLACMIVAVERFIAE---HPD 124 (268)
T ss_dssp EEC-CEEE-CSS--SCEEEEEEECCBCCCCCGGGCSSCTTSCEEETTEEESTTTTTTHHHHHHHHHHHHHHHHH---CTT
T ss_pred ccEEEEEe-CCC--CCeEEEEccccccCCCCcccCCCCCCccEEECCEEEecCcccchHHHHHHHHHHHHHHHh---CCC
Confidence 47999998 653 568999999998742 8999999999999999988754 346
Q ss_pred CCCcEEEEEeCCccCCC-CChHHHHHHHHHhhhccEEEEEEccCcccC---Ccc--c------cccChhHHHHHHHHHHH
Q 005260 381 PRRTIVLCNWDAEEYGL-IGSTEWVEENREMLASRAVAYLNIDSAVHE---AGF--H------ASATPQLDELLKQAAKQ 448 (705)
Q Consensus 381 p~rtI~Fv~~~~EE~Gl-~GS~~~~~~~~~~l~~~~va~iNlD~~g~g---~~l--~------~~~sp~l~~l~~~~~~~ 448 (705)
++++|+|+++.+||.|. .||..+++..... ..+..+.|++|..... ..+ . +...+.+.+.+.++++.
T Consensus 125 ~~~~v~~~~~~~EE~g~~~Ga~~~~~~~~~~-~~~~d~~i~~ept~~~~~~~~i~~g~~G~p~~~~~~~l~~~l~~a~~~ 203 (268)
T 3t68_A 125 HQGSIGFLITSDEEGPFINGTVRVVETLMAR-NELIDMCIVGEPSSTLAVGDVVKNGRRGGGFLTDTGELLAAVVAAVEE 203 (268)
T ss_dssp CSSEEEEEEESCTTSSSCCHHHHHHHHHHHT-TCCCCEEEECSCCBSSSTTSEEEECCGGGGTSCCCCHHHHHHHHHHHH
T ss_pred CCCcEEEEEEeCCccCcccCHHHHHHHHHhc-CCCCCEEEEeCCCCCccCCceeEEecCCCcccCCchHHHHHHHHHHHH
Confidence 78999999999999998 4999988875443 3456678888865321 111 0 11123366666666654
Q ss_pred c-CCCCCCccchhhccccCCCCCccccCCCCCCchHHHHhcCCceEEEeeeCCCCCCCCCCccchHHHHhhCCcchHHHH
Q 005260 449 V-QDPDNSSQTIYDSWTGSSNSPVIGRLGGGGSDYAAFIQHIGVPVADMSFGTGYPVYHSMYDDFIWMEKFGDPTFQRHV 527 (705)
Q Consensus 449 v-~~p~~~~~~l~~~~~~~~~~~~~~~~g~~~SD~~~F~~~~GIPs~~l~~~~~~p~yHt~~Dt~~~l~~~~dp~~~~~~ 527 (705)
+ .-+ +.....+ +++|...|.+ .|+|++.|... ...+||+.+..+.- -..
T Consensus 204 ~~gi~-----------------~~~~~sg-ggtD~~~~~~-~g~p~~~~~~~--~~~~Hs~~E~v~~~---------d~~ 253 (268)
T 3t68_A 204 VNHQA-----------------PALLTTG-GTSDGRFIAQ-MGAQVVELGPV--NATIHKVNECVRIA---------DLE 253 (268)
T ss_dssp HHSSC-----------------CEEESSC-CCHHHHHHHH-HTCEEEECCSB--CTTTTSTTCEEEHH---------HHH
T ss_pred HhCCC-----------------cEEecCc-cccHHHHHHh-cCCCEEEEeeC--CCCCCCccccccHH---------HHH
Confidence 2 211 1122334 7899998886 69999987653 34569999876532 234
Q ss_pred HHHHHHHHHHHHhC
Q 005260 528 AAASMWGLVALQLA 541 (705)
Q Consensus 528 ~~a~~~~~l~~~La 541 (705)
+.++++..++.+|.
T Consensus 254 ~~~~vl~~~l~~l~ 267 (268)
T 3t68_A 254 KLTDMYQKTLNHLL 267 (268)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHh
Confidence 56677777777664
No 17
>1y0y_A FRV operon protein FRVX; aminopeptidase, PDZ, hydrolase; HET: ATI; 1.60A {Pyrococcus horikoshii} SCOP: b.49.3.1 c.56.5.4 PDB: 1y0r_A* 1xfo_A
Probab=99.12 E-value=3e-10 Score=122.49 Aligned_cols=148 Identities=22% Similarity=0.239 Sum_probs=99.7
Q ss_pred CCCChhHHHHHHHHHHHHHHhHHcCCCCCCcEEEEEeCCccCCCCChHHHHHHHHHhhhccEEEEEEccCcccCC--cc-
Q 005260 354 AVDPNSGTAALLEVAQRLNKLQKRGWKPRRTIVLCNWDAEEYGLIGSTEWVEENREMLASRAVAYLNIDSAVHEA--GF- 430 (705)
Q Consensus 354 A~DnaSG~A~lLElAr~l~~l~~~g~~p~rtI~Fv~~~~EE~Gl~GS~~~~~~~~~~l~~~~va~iNlD~~g~g~--~l- 430 (705)
|.||.+|+|++|++++.|.+ |+++|+|++++.||.|+.||..++.. + +.-..|++|+...+. ..
T Consensus 180 a~D~k~g~a~~l~a~~~l~~-------~~~~i~~~~~~~EE~g~~G~~~~~~~----~--~~~~~i~~d~~~~~~~p~~~ 246 (353)
T 1y0y_A 180 AFDDRIAVYTILEVAKQLKD-------AKADVYFVATVQEEVGLRGARTSAFG----I--EPDYGFAIDVTIAADIPGTP 246 (353)
T ss_dssp THHHHHHHHHHHHHHHHCCS-------CSSEEEEEEESCCTTTSHHHHHHHHH----H--CCSEEEEEEEEECCCSTTCC
T ss_pred cCccHHHHHHHHHHHHHhhc-------CCCeEEEEEECCcccchhHHHHHhhc----c--CCCEEEEEecccccCCCCCc
Confidence 58899999999999987532 67999999999999999999987532 2 223567788764321 10
Q ss_pred -------------------ccccChhHHHHHHHHHHHcCCCCCCccchhhccccCCCCCcc-ccCCCCCCchHHHHh-cC
Q 005260 431 -------------------HASATPQLDELLKQAAKQVQDPDNSSQTIYDSWTGSSNSPVI-GRLGGGGSDYAAFIQ-HI 489 (705)
Q Consensus 431 -------------------~~~~sp~l~~l~~~~~~~v~~p~~~~~~l~~~~~~~~~~~~~-~~~g~~~SD~~~F~~-~~ 489 (705)
....++.+.+.+.++++...-| +.. ...+ ++||+.+|.. ..
T Consensus 247 ~~~g~~~lg~G~~i~~~d~~~~~~~~l~~~l~~~a~~~gi~-----------------~~~~~~~~-ggsDa~~~~~~~~ 308 (353)
T 1y0y_A 247 EHKQVTHLGKGTAIKIMDRSVICHPTIVRWLEELAKKHEIP-----------------YQLEILLG-GGTDAGAIHLTKA 308 (353)
T ss_dssp GGGCCCCTTSCEEEEEEETTEECCHHHHHHHHHHHHHTTCC-----------------EEEEECSS-CCCTHHHHTTSTT
T ss_pred cccCccccCCCcEEEEeCCCCCCCHHHHHHHHHHHHHcCCC-----------------EEEeecCC-CCchHHHHHHhCC
Confidence 1123556677777777654221 111 1133 7899999942 36
Q ss_pred CceEEEeeeCCCCCCCCCCccchHHHHhhCCcchHHHHHHHHHHHHHHHHhCCC
Q 005260 490 GVPVADMSFGTGYPVYHSMYDDFIWMEKFGDPTFQRHVAAASMWGLVALQLADE 543 (705)
Q Consensus 490 GIPs~~l~~~~~~p~yHt~~Dt~~~l~~~~dp~~~~~~~~a~~~~~l~~~La~~ 543 (705)
|||++.++... ..+||+.+..+. ......++++..++.+|+..
T Consensus 309 GiPtv~lg~~~--~~~Hs~~E~v~~---------~dl~~~~~ll~~~l~~l~~~ 351 (353)
T 1y0y_A 309 GVPTGALSVPA--RYIHSNTEVVDE---------RDVDATVELMTKALENIHEL 351 (353)
T ss_dssp CCCEEEEEEEE--BSCSSSCEEEEH---------HHHHHHHHHHHHHHHHGGGC
T ss_pred CCcEEEEcccc--cccCCHHHhcCH---------HHHHHHHHHHHHHHHhhhhc
Confidence 99999987542 358998876542 22456677888888887653
No 18
>2wyr_A Cobalt-activated peptidase TET1; hydrolase, large SELF-assembled dodecamer, hyperthermophilic; 2.24A {Pyrococcus horikoshii} PDB: 2cf4_A
Probab=99.10 E-value=2.2e-10 Score=122.44 Aligned_cols=144 Identities=20% Similarity=0.182 Sum_probs=96.5
Q ss_pred CCCChhHHHHHHHHHHHHHHhHHcCCCCCCcEEEEEeCCccCCCCChHHHHHHHHHhhhccEEEEEEccCcccCC-----
Q 005260 354 AVDPNSGTAALLEVAQRLNKLQKRGWKPRRTIVLCNWDAEEYGLIGSTEWVEENREMLASRAVAYLNIDSAVHEA----- 428 (705)
Q Consensus 354 A~DnaSG~A~lLElAr~l~~l~~~g~~p~rtI~Fv~~~~EE~Gl~GS~~~~~~~~~~l~~~~va~iNlD~~g~g~----- 428 (705)
+.||.+|+|++|++++.|.+. .++++|+|++++.||.|..|+..+++. + +.-..|++|+.....
T Consensus 171 a~D~k~g~a~~l~a~~~l~~~-----~~~~~i~~~~~~~EE~G~~G~~~~~~~----~--~~~~~i~~d~~~~~~~p~~~ 239 (332)
T 2wyr_A 171 GLDDRFGVVALIEAIKDLVDH-----ELEGKVIFAFTVQEEVGLKGAKFLANH----Y--YPQYAFAIDSFACCSPLTGD 239 (332)
T ss_dssp THHHHHHHHHHHHHHHTTTTS-----CCSSEEEEEEESCGGGTSHHHHHHTTT----C--CCSEEEEECCEECCSGGGTT
T ss_pred cCCcHHHHHHHHHHHHHHhhc-----CCCceEEEEEECccccCcchHHHHhcc----c--CCCEEEEEecccccCCCCCc
Confidence 588999999999999987542 367999999999999999999887632 2 234578888765321
Q ss_pred -------cc-----ccccChhHHHHHHHHHHHcCCCCCCccchhhccccCCCCCccccCCCCCCchHHHHhcCCceEEEe
Q 005260 429 -------GF-----HASATPQLDELLKQAAKQVQDPDNSSQTIYDSWTGSSNSPVIGRLGGGGSDYAAFIQHIGVPVADM 496 (705)
Q Consensus 429 -------~l-----~~~~sp~l~~l~~~~~~~v~~p~~~~~~l~~~~~~~~~~~~~~~~g~~~SD~~~F~~~~GIPs~~l 496 (705)
.+ ....++.+.+.+.++++....| +.....+ ++||+.+|.. |||++.+
T Consensus 240 ~~lg~G~~i~~~d~~~~~~~~l~~~l~~~~~~~gi~-----------------~~~~~~~-ggtDa~~~~~--GiPtv~l 299 (332)
T 2wyr_A 240 VKLGKGPVIRAVDNSAIYSRDLARKVWSIAEKNGIE-----------------IQIGVTG-GGTDASAFQD--RSKTLAL 299 (332)
T ss_dssp CCTTSCCEEEEECSSCBCCHHHHHHHHHHHHHTTCC-----------------CEEEECS-SCCGGGGGTT--TSEEEEE
T ss_pred eeeCCCCEEEEcCCCCCCCHHHHHHHHHHHHHcCCC-----------------eEEecCC-CCchHHHHHc--CCCEEEE
Confidence 11 1224556677777776654221 1122234 7899998865 9999987
Q ss_pred eeCCCCCCCCCCccchHHHHhhCCcchHHHHHHHHHHHHHHHH
Q 005260 497 SFGTGYPVYHSMYDDFIWMEKFGDPTFQRHVAAASMWGLVALQ 539 (705)
Q Consensus 497 ~~~~~~p~yHt~~Dt~~~l~~~~dp~~~~~~~~a~~~~~l~~~ 539 (705)
+.. ...+||+.+..+. ......++++..++.+
T Consensus 300 g~~--~~~~Hs~~E~v~~---------~dl~~~~~ll~~~~~~ 331 (332)
T 2wyr_A 300 SVP--IKYLHSEVETLHL---------NDLEKLVKLIEALAFE 331 (332)
T ss_dssp ECE--EBSCSSTTCEEEH---------HHHHHHHHHHHHHHHH
T ss_pred cCC--cCCCCChhhcccH---------HHHHHHHHHHHHHHHh
Confidence 643 2358998776542 2244556676666654
No 19
>1vhe_A Aminopeptidase/glucanase homolog; structural genomics, unknown function; HET: MSE; 1.90A {Bacillus subtilis} SCOP: b.49.3.1 c.56.5.4
Probab=99.06 E-value=9.5e-10 Score=119.52 Aligned_cols=148 Identities=20% Similarity=0.214 Sum_probs=97.8
Q ss_pred CCCChhHHHHHHHHHHHHHHhHHcCCCCCCcEEEEEeCCccCCCCChHHHHHHHHHhhhccEEEEEEccCcccCC--c--
Q 005260 354 AVDPNSGTAALLEVAQRLNKLQKRGWKPRRTIVLCNWDAEEYGLIGSTEWVEENREMLASRAVAYLNIDSAVHEA--G-- 429 (705)
Q Consensus 354 A~DnaSG~A~lLElAr~l~~l~~~g~~p~rtI~Fv~~~~EE~Gl~GS~~~~~~~~~~l~~~~va~iNlD~~g~g~--~-- 429 (705)
+.||.+|+|++|++++.|.+. .++++|+|++++.||.|+.|+..+.+. +.. -..|++|+...+. .
T Consensus 182 ~~D~k~g~a~~l~a~~~l~~~-----~~~~~v~~~~~~~EE~G~~G~~~~~~~----~~~--d~~i~~d~~~~~~~~g~~ 250 (373)
T 1vhe_A 182 AWDNRIGCAIAIDVLRNLQNT-----DHPNIVYGVGTVQEEVGLRGAKTAAHT----IQP--DIAFGVDVGIAGDTPGIS 250 (373)
T ss_dssp THHHHHHHHHHHHHHHHHHTS-----CCSSEEEEEEESCCTTTSHHHHHHHHH----HCC--SEEEEEEEEECCCSTTCC
T ss_pred cCccHHHHHHHHHHHHHHhhc-----CCCceEEEEEECCcccChhhHHHHhcc----cCC--CEEEEEeccccCCCCCCc
Confidence 788899999999999988653 367999999999999999999887432 222 3457777654321 0
Q ss_pred -------------c-----ccccChhHHHHHHHHHHHcCCCCCCccchhhccccCCCCCcc-ccCCCCCCchHHHHh-cC
Q 005260 430 -------------F-----HASATPQLDELLKQAAKQVQDPDNSSQTIYDSWTGSSNSPVI-GRLGGGGSDYAAFIQ-HI 489 (705)
Q Consensus 430 -------------l-----~~~~sp~l~~l~~~~~~~v~~p~~~~~~l~~~~~~~~~~~~~-~~~g~~~SD~~~F~~-~~ 489 (705)
+ ....++.+.+.+.++++...-+ +.. ...+ ++||+.+|.. ..
T Consensus 251 ~~~~~~~lg~G~~i~~~~~~~~~~~~l~~~l~~~a~~~gi~-----------------~~~~~~~~-ggtDa~~~~~~~~ 312 (373)
T 1vhe_A 251 EKEAQSKMGKGPQIIVYDASMVSHKGLRDAVVATAEEAGIP-----------------YQFDAIAG-GGTDSGAIHLTAN 312 (373)
T ss_dssp TTTCCCCTTSCCEEEEEETTEECCHHHHHHHHHHHHHHTCC-----------------CEEEEETT-CCCTHHHHTTSTT
T ss_pred ccccccccCCCceEEEeCCCCCCCHHHHHHHHHHHHHcCCC-----------------eEEecCCC-CCccHHHHHHhCC
Confidence 0 1123556666777776654221 111 1123 7899998832 36
Q ss_pred CceEEEeeeCCCCCCCCCCccchHHHHhhCCcchHHHHHHHHHHHHHHHHhC
Q 005260 490 GVPVADMSFGTGYPVYHSMYDDFIWMEKFGDPTFQRHVAAASMWGLVALQLA 541 (705)
Q Consensus 490 GIPs~~l~~~~~~p~yHt~~Dt~~~l~~~~dp~~~~~~~~a~~~~~l~~~La 541 (705)
|||++.++... ..+||+.+..+. ......++++..++.+|+
T Consensus 313 GiPtv~lg~~~--~~~Hs~~E~v~~---------~dl~~~~~ll~~~l~~l~ 353 (373)
T 1vhe_A 313 GVPALSITIAT--RYIHTHAAMLHR---------DDYENAVKLITEVIKKLD 353 (373)
T ss_dssp CCCEEEEEEEE--BSTTSSCEEEEH---------HHHHHHHHHHHHHHHHCC
T ss_pred CCcEEEEcccc--ccCCChhheecH---------HHHHHHHHHHHHHHHHhc
Confidence 99999986542 347998765432 234466778887777764
No 20
>2fvg_A Endoglucanase; TM1049, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; 2.01A {Thermotoga maritima} SCOP: b.49.3.1 c.56.5.4
Probab=99.05 E-value=1.5e-10 Score=124.24 Aligned_cols=147 Identities=19% Similarity=0.189 Sum_probs=84.0
Q ss_pred CCCChhHHHHHHHHHHHHHHhHHcCCCCCCcEEEEEeCCccCCCCChHHHHHHHHHhhhccEEEEEEccCcccC----Cc
Q 005260 354 AVDPNSGTAALLEVAQRLNKLQKRGWKPRRTIVLCNWDAEEYGLIGSTEWVEENREMLASRAVAYLNIDSAVHE----AG 429 (705)
Q Consensus 354 A~DnaSG~A~lLElAr~l~~l~~~g~~p~rtI~Fv~~~~EE~Gl~GS~~~~~~~~~~l~~~~va~iNlD~~g~g----~~ 429 (705)
+.||.+|++++|++++.|. +|+++|+|++++.||.|+.|+..+++. +..+ ..|++|+...+ ..
T Consensus 165 a~D~k~g~a~~l~a~~~l~-------~~~~~i~~~~~~~EE~G~~G~~~~~~~----~~~~--~~i~~d~~~~~~~~G~~ 231 (340)
T 2fvg_A 165 AFDDRAGCSVLIDVLESGV-------SPAYDTYFVFTVQEETGLRGSAVVVEQ----LKPT--CAIVVETTTAGDNPELE 231 (340)
T ss_dssp CHHHHHHHHHHHHHHHTCC-------CCSEEEEEEEECCCC-----CHHHHHH----HCCS--EEEEEEEEEECSCSTTC
T ss_pred cCccHHHHHHHHHHHHHhh-------ccCCcEEEEEEcccccchhhhHHHhhc----cCCC--EEEEEecccCCCCCCCc
Confidence 5789999999999998763 478999999999999999999988763 2222 46777765321 00
Q ss_pred -------------cc-----cccChhHHHHHHHHHHHcCCCCCCccchhhccccCCCCCccc-cCCCCCCchHHHHh-cC
Q 005260 430 -------------FH-----ASATPQLDELLKQAAKQVQDPDNSSQTIYDSWTGSSNSPVIG-RLGGGGSDYAAFIQ-HI 489 (705)
Q Consensus 430 -------------l~-----~~~sp~l~~l~~~~~~~v~~p~~~~~~l~~~~~~~~~~~~~~-~~g~~~SD~~~F~~-~~ 489 (705)
+. ...+|.+.+.+.++++...-|. ... ..+ ++||..+|.. ..
T Consensus 232 ~h~~~~~~G~g~~i~~~~~~~~~~~~l~~~l~~~a~~~gi~~-----------------~~~~~~~-ggtDa~~~~~~~~ 293 (340)
T 2fvg_A 232 ERKWATHLGDGPAITFYHRGYVIPKEIFQTIVDTAKNNDIPF-----------------QMKRRTA-GGTDAGRYARTAY 293 (340)
T ss_dssp CSSSSCCTTSCCEECSCCSSSCCCHHHHHHHHHHHHHTTCCC-----------------EECCCC--------------C
T ss_pred cccCCcccCCCcEEEEeCCCCCCCHHHHHHHHHHHHHcCCCe-----------------EEEecCC-CCccHHHHHhhCC
Confidence 00 1124667777777766532211 111 233 7899998874 25
Q ss_pred CceEEEeeeCCCCCCCCCCccchHHHHhhCCcchHHHHHHHHHHHHHHHHhCC
Q 005260 490 GVPVADMSFGTGYPVYHSMYDDFIWMEKFGDPTFQRHVAAASMWGLVALQLAD 542 (705)
Q Consensus 490 GIPs~~l~~~~~~p~yHt~~Dt~~~l~~~~dp~~~~~~~~a~~~~~l~~~La~ 542 (705)
|||++.++-... .+||+.+..+. ......++++..++.+++.
T Consensus 294 GiP~v~~g~~~~--~~Hs~~E~v~~---------~dl~~~~~ll~~~~~~l~~ 335 (340)
T 2fvg_A 294 GVPAGVISTPAR--YIHSPNSIIDL---------NDYENTKKLIKVLVEEGKI 335 (340)
T ss_dssp CSCEEEEEEEEE--ESSTTCEEEEH---------HHHHHHHHHHHHHHHHCHH
T ss_pred CCcEEEeccccc--ccCChhhcccH---------HHHHHHHHHHHHHHHhccc
Confidence 999998865433 38999876542 2244567777777777654
No 21
>2gre_A Deblocking aminopeptidase; structural genomi protein structure initiative, midwest center for structural genomics, MCSG, hydrolase; 2.65A {Bacillus cereus} SCOP: b.49.3.1 c.56.5.4
Probab=99.04 E-value=1.6e-09 Score=116.59 Aligned_cols=129 Identities=22% Similarity=0.183 Sum_probs=80.6
Q ss_pred CCCChhHHHHHHHHHHHHHHhHHcCCCCCCcEEEEEeCCccCCCCChHHHHHHHHHhhhccEEEEEEccCcccCCc----
Q 005260 354 AVDPNSGTAALLEVAQRLNKLQKRGWKPRRTIVLCNWDAEEYGLIGSTEWVEENREMLASRAVAYLNIDSAVHEAG---- 429 (705)
Q Consensus 354 A~DnaSG~A~lLElAr~l~~l~~~g~~p~rtI~Fv~~~~EE~Gl~GS~~~~~~~~~~l~~~~va~iNlD~~g~g~~---- 429 (705)
+.||.+|++++|++++.|.+ .+.+|+++|+|++++.||.|+.|+..+ ..+....|++|+...+..
T Consensus 184 ~~D~k~g~a~~l~a~~~l~~---~~~~~~~~i~~~~~~~EE~G~~g~~~~--------~~~~~~~i~~D~~~~~~~p~~~ 252 (349)
T 2gre_A 184 HLDDKVSVAILLKLIKRLQD---ENVTLPYTTHFLISNNEEIGYGGNSNI--------PEETVEYLAVDMGALGDGQASD 252 (349)
T ss_dssp CCTTHHHHHHHHHHHHHHHH---HTCCCSEEEEEEEESCC----CCCCCC--------CTTEEEEEEECCCCCSCC--CC
T ss_pred eccchHHHHHHHHHHHHHHh---ccCCCCceEEEEEECcccCCchhhccc--------ccCCCEEEEEecccccCCCCCC
Confidence 58999999999999998764 355788999999999999999999865 235778899999765421
Q ss_pred ---c--c-----cccChhHHHHHHHHHHHcCCCCCCccchhhccccCCCCCccccCCCCCCchHHHHh-cCCceEEEeee
Q 005260 430 ---F--H-----ASATPQLDELLKQAAKQVQDPDNSSQTIYDSWTGSSNSPVIGRLGGGGSDYAAFIQ-HIGVPVADMSF 498 (705)
Q Consensus 430 ---l--~-----~~~sp~l~~l~~~~~~~v~~p~~~~~~l~~~~~~~~~~~~~~~~g~~~SD~~~F~~-~~GIPs~~l~~ 498 (705)
. . ...++.+.+.+.++++...-|.. . . ...+ +|||+.+|.. ..|||++.++.
T Consensus 253 ~~g~~i~~~~~~~~~~~~l~~~l~~~a~~~gi~~q---~------------~-~~~g-gGsDa~~~~~~~~GiPt~~lg~ 315 (349)
T 2gre_A 253 EYTVSICAKDSSGPYHYALRKHLVELAKTNHIEYK---V------------D-IYPY-YGSDASAAIRAGFDVKHALIGA 315 (349)
T ss_dssp TTSEEEEEEETTEECCHHHHHHHHHHHHHHTCCEE---E------------E-ECSC-C--------CCSSSCEEEEEEE
T ss_pred CCceEEEEccCCCCCCHHHHHHHHHHHHHcCCCcE---E------------e-ccCC-CCccHHHHHHhCCCCcEEEecc
Confidence 1 1 12467788888888776432211 0 0 1123 7899998852 36999998865
Q ss_pred CCCCCCCCCCccchH
Q 005260 499 GTGYPVYHSMYDDFI 513 (705)
Q Consensus 499 ~~~~p~yHt~~Dt~~ 513 (705)
.. .+.|| .+..+
T Consensus 316 ~~--~~~Hs-~E~~~ 327 (349)
T 2gre_A 316 GI--DSSHA-FERTH 327 (349)
T ss_dssp CC--BSTTS-SEEEE
T ss_pred Cc--ccccc-ceecc
Confidence 33 34788 66543
No 22
>3icu_A E3 ubiquitin-protein ligase RNF128; E3 ligase, energy, PA domain, transmembrane,protein turnover conjugation pathway; HET: NAG; 2.10A {Homo sapiens}
Probab=98.80 E-value=2.8e-08 Score=96.97 Aligned_cols=106 Identities=22% Similarity=0.224 Sum_probs=74.1
Q ss_pred cccCCCCcceEEeEEEec-----CCCh-hchHHHHhc--CCcccceEEEEEeCC-CcchhHHHHHHHcCCeEEEEEecCC
Q 005260 134 FHGYAKSGTVIGPVVYVN-----YGRV-EDYVTLKEM--VVNVTGTVVLARYGQ-IFRGDIVHNAFEAGAAGALIFTDRK 204 (705)
Q Consensus 134 ~~a~S~~G~v~g~lVyv~-----~G~~-~D~~~L~~~--gv~v~GkIvl~~~g~-~~~~~k~~~A~~~GA~gvi~~~dp~ 204 (705)
|-..+|.++++|.||++. .|+. .|+...... +...+||||||+.|+ |.+.+|+.+|+++||+|||||++..
T Consensus 61 FG~~~p~~~v~G~lv~~~~~~~~~GC~~~~~~~~~~~~~~~~~~gkIaLV~RG~~CsF~~Kv~nAq~aGA~avIIyNn~~ 140 (194)
T 3icu_A 61 YGQDSPLEPVAGVLVPPDGPGALNACNPHTNFTVPTVWGSTVQVSWLALIQRGGGCTFADKIHLAYERGASGAVIFNFPG 140 (194)
T ss_dssp ECTTSCCSCEEEEEECBSSTTCTTCCSTTCCBCCCBCTTSSCBCCEEEEEESCTTCCHHHHHHHHHHTTCSEEEEECCTT
T ss_pred cCCCCCCCCcEEEEEecCCCCCcCCCCCCccccCCcccccccCCCeEEEEECCCCcCHHHHHHHHHHCCCcEEEEEeCCC
Confidence 555678899999999984 5653 444310000 012478999999999 9999999999999999999998631
Q ss_pred CCCCCCCCCCcCCCCCCCCCCCceeeeeecCCCCCCCCCCCCCCcccccchHHHhhcCCCCCCCcccCCHHHHHHHHHHc
Q 005260 205 DYGGGSDDARWFPDDKWMPPSGVQVGSVYDGTGDPTTPGWPSSEGCERLSKEEVEKAGNVPLIPSLPISAKDGETIMRSI 284 (705)
Q Consensus 205 ~~~~~~~~~~~yP~~~~~p~~~v~rg~v~~~~Gdp~tPg~ps~~~~~r~~~~~~~~~~~~p~IP~~~is~~~a~~Ll~~l 284 (705)
+ +. . ...++.+ ....||++.|++++++.|++.|
T Consensus 141 ~-g~-------------------~----~~~m~~~-----------------------~~~~IPsv~Is~~~G~~L~~~L 173 (194)
T 3icu_A 141 T-RN-------------------E----VIPMSHP-----------------------GAVDIVAIMIGNLKGTKILQSI 173 (194)
T ss_dssp C-TT-------------------C----CCCCCCT-----------------------TCCSSEEEEECHHHHHHHHHHH
T ss_pred C-CC-------------------c----eeeecCC-----------------------CCCceeEEEECHHHHHHHHHHH
Confidence 1 00 0 0001111 1236999999999999999998
Q ss_pred CC
Q 005260 285 GG 286 (705)
Q Consensus 285 ~~ 286 (705)
..
T Consensus 174 ~~ 175 (194)
T 3icu_A 174 QR 175 (194)
T ss_dssp HT
T ss_pred HC
Confidence 53
No 23
>1q7l_A Aminoacylase-1; catalysis, enzyme dimerization, site- directed mutagenesis, structure comparison, zinc, hydrolase; 1.40A {Homo sapiens} SCOP: c.56.5.4
Probab=98.64 E-value=8.2e-08 Score=94.76 Aligned_cols=82 Identities=27% Similarity=0.297 Sum_probs=68.6
Q ss_pred eeeEEEEecCCCCCCcEEEEeeccCCcC-----------------------CCCCCChhHHHHHHHHHHHHHHhHHcCCC
Q 005260 324 IQNVIGIIPGTEEPDRLVILGNHRDAWT-----------------------FGAVDPNSGTAALLEVAQRLNKLQKRGWK 380 (705)
Q Consensus 324 ~~NVia~i~G~~~p~~~ViigaH~Ds~~-----------------------~GA~DnaSG~A~lLElAr~l~~l~~~g~~ 380 (705)
..||+++++|..+..+.|++.+|+|+++ .|+.|+.+|++++|++++.|.+ .+.+
T Consensus 58 ~~~~i~~~~g~~~~~~~ill~aH~DtVp~~~~~w~~~pf~~~~~~~g~l~GrGa~D~K~g~a~~l~a~~~l~~---~~~~ 134 (198)
T 1q7l_A 58 YVVTVLTWPGTNPTLSSILLNSHTDVVPVFKEHWSHDPFEAFKDSEGYIYARGAQDMKCVSIQYLEAVRRLKV---EGHR 134 (198)
T ss_dssp EEEEEEEECCSSTTSCEEEEEEECCBCCCCGGGCSSCTTTCCBCTTSEEECTTTTTTHHHHHHHHHHHHHHHH---TTCC
T ss_pred CeEEEEEEccCCCCCCeEEEEeeecccCCCcccCccCCCeeeEccCCEEEeCcchhchHHHHHHHHHHHHHHH---cCCC
Confidence 4699999998653347899999999842 1679999999999999999875 3567
Q ss_pred CCCcEEEEEeCCccCC-CCChHHHHHHHH
Q 005260 381 PRRTIVLCNWDAEEYG-LIGSTEWVEENR 408 (705)
Q Consensus 381 p~rtI~Fv~~~~EE~G-l~GS~~~~~~~~ 408 (705)
|+++|+|+++.+||.| +.|+..++++..
T Consensus 135 ~~~~v~~~~~~~EE~g~~~Ga~~~~~~~~ 163 (198)
T 1q7l_A 135 FPRTIHMTFVPDEEVGGHQGMELFVQRPE 163 (198)
T ss_dssp CSSCEEEEEESCGGGTSTTTHHHHTTSHH
T ss_pred CCCCEEEEEEcccccCccccHHHHHHhHH
Confidence 8999999999999997 799999887643
No 24
>3n5f_A L-carbamoylase, N-carbamoyl-L-amino acid hydrolase; hinge domain, M20 peptidase family, evolution, residue, dimerization domain; 2.75A {Bacillus stearothermophilus}
Probab=98.50 E-value=2.2e-07 Score=101.85 Aligned_cols=80 Identities=31% Similarity=0.414 Sum_probs=69.1
Q ss_pred eeeEEEEecCCCCCCcEEEEeeccCCcCC-CCCCChhHHHHHHHHHHHHHHhHHcCCCCCCcEEEEEeCCccC-----CC
Q 005260 324 IQNVIGIIPGTEEPDRLVILGNHRDAWTF-GAVDPNSGTAALLEVAQRLNKLQKRGWKPRRTIVLCNWDAEEY-----GL 397 (705)
Q Consensus 324 ~~NVia~i~G~~~p~~~ViigaH~Ds~~~-GA~DnaSG~A~lLElAr~l~~l~~~g~~p~rtI~Fv~~~~EE~-----Gl 397 (705)
..||+|+++|..++.+.|++.+|+|+++. |+.|+.+|++++|++++.|.+. +.+|+++|+|+++.+||. |+
T Consensus 57 ~gnv~a~~~g~~~~~~~i~l~aH~D~v~~~g~~d~~~g~a~~l~~~~~l~~~---~~~~~~~i~~~~~~~EE~~~~~~g~ 133 (408)
T 3n5f_A 57 AGNLIGRKEGTNPDATVVLVGSHLDSVYNGGCFDGPLGVLAGVEVVQTMNEH---GVVTHHPIEVVAFTDEEGARFRFGM 133 (408)
T ss_dssp TCCEEEEECCSSTTSCEEEEEEESCCCTTBCSSTTHHHHHHHHHHHHHHHHT---TCCCSSCEEEEEESCSSCTTTTCCC
T ss_pred CCCEEEEecCCCCCCCEEEEEecCCCCCCCCccCCHHHHHHHHHHHHHHHHc---CCCCCCCEEEEEEcCccccccCCCC
Confidence 35999999997643689999999999987 8899999999999999998764 457899999999999995 78
Q ss_pred CChHHHHHH
Q 005260 398 IGSTEWVEE 406 (705)
Q Consensus 398 ~GS~~~~~~ 406 (705)
.||..++..
T Consensus 134 ~Gs~~~~~~ 142 (408)
T 3n5f_A 134 IGSRAMAGT 142 (408)
T ss_dssp HHHHHHHTC
T ss_pred cCHHHHHcC
Confidence 899988743
No 25
>3kl9_A PEPA, glutamyl aminopeptidase; tetrahedral aminopeptidase, S specificity, metallopeptidase M42, hydrolas; 2.70A {Streptococcus pneumoniae}
Probab=98.48 E-value=5.6e-07 Score=96.82 Aligned_cols=148 Identities=20% Similarity=0.172 Sum_probs=98.7
Q ss_pred CCCCChhHHHHHHHHHHHHHHhHHcCCCCCCcEEEEEeCCccCCCCChHHHHHHHHHhhhccEEEEEEccCcccC-----
Q 005260 353 GAVDPNSGTAALLEVAQRLNKLQKRGWKPRRTIVLCNWDAEEYGLIGSTEWVEENREMLASRAVAYLNIDSAVHE----- 427 (705)
Q Consensus 353 GA~DnaSG~A~lLElAr~l~~l~~~g~~p~rtI~Fv~~~~EE~Gl~GS~~~~~~~~~~l~~~~va~iNlD~~g~g----- 427 (705)
.+-||-.|++++||+++.+++. +|.+++.|++..-||.|+.|++.-.... ..++ .|.+|+...+
T Consensus 179 ~~lDnr~g~~~~l~~l~~l~~~-----~~~~~v~~~ft~qEEvG~~Ga~~a~~~~----~pd~--~i~~D~~~a~d~p~~ 247 (355)
T 3kl9_A 179 KAWDNRYGVLMVSELAEALSGQ-----KLGNELYLGSNVQEEVGLRGAHTSTTKF----DPEV--FLAVDCSPAGDVYGG 247 (355)
T ss_dssp SCHHHHHHHHHHHHHHHHHSSC-----CCSSEEEEEEESCCTTTSHHHHHHHHHH----CCSE--EEEEEEEECCGGGTS
T ss_pred eccccHHHHHHHHHHHHHhhhc-----CCCceEEEEEECccccCcchhHHHHhcc----CCCE--EEEecCccCCCCCCc
Confidence 6789999999999999876531 5789999999999999999987644332 2233 5778875332
Q ss_pred -------Ccc-----ccccChhHHHHHHHHHHHcCCCCCCccchhhccccCCCCCccccCCCCCCchHHHHh-cCCceEE
Q 005260 428 -------AGF-----HASATPQLDELLKQAAKQVQDPDNSSQTIYDSWTGSSNSPVIGRLGGGGSDYAAFIQ-HIGVPVA 494 (705)
Q Consensus 428 -------~~l-----~~~~sp~l~~l~~~~~~~v~~p~~~~~~l~~~~~~~~~~~~~~~~g~~~SD~~~F~~-~~GIPs~ 494 (705)
..+ ....+|.+.+.+.+++++..-|.. ....+ +|||..++.. ..|||++
T Consensus 248 ~~~lg~G~~i~~~d~~~~~~~~l~~~l~~~a~~~gIp~q-----------------~~~~g-gGtDa~~i~~a~~Gipt~ 309 (355)
T 3kl9_A 248 QGKIGDGTLIRFYDPGHLLLPGMKDFLLTTAEEAGIKYQ-----------------YYCGK-GGTDAGAAHLKNGGVPST 309 (355)
T ss_dssp SCCTTSCEEEEEEETTEECCHHHHHHHHHHHHHTTCCEE-----------------EEECS-SCCTHHHHTTSTTCCCEE
T ss_pred ccccCCCcEEEEecCCCCCCHHHHHHHHHHHHHcCCCEE-----------------EECCC-cchHHHHHHHhCCCCCEE
Confidence 112 123567888889888886543311 11123 7999988864 3599999
Q ss_pred EeeeCCCCCCCCCCccchHHHHhhCCcchHHHHHHHHHHHHHHHHh
Q 005260 495 DMSFGTGYPVYHSMYDDFIWMEKFGDPTFQRHVAAASMWGLVALQL 540 (705)
Q Consensus 495 ~l~~~~~~p~yHt~~Dt~~~l~~~~dp~~~~~~~~a~~~~~l~~~L 540 (705)
+++.... +.||+....+.- -....++++..++.+|
T Consensus 310 ~igvp~~--~~Hs~~E~~~~~---------Di~~~~~ll~~~l~~l 344 (355)
T 3kl9_A 310 TIGVCAR--YIHSHQTLYAMD---------DFLEAQAFLQALVKKL 344 (355)
T ss_dssp EEEEEEB--SCSSSCEEEEHH---------HHHHHHHHHHHHHHTC
T ss_pred EEccCcC--CCCCcceEeeHH---------HHHHHHHHHHHHHHHh
Confidence 9876322 479888665422 1234556666666555
No 26
>1ylo_A Hypothetical protein SF2450; structural genomics, MCSG, PSI, structure initiative; 2.15A {Shigella flexneri 2a str} SCOP: b.49.3.1 c.56.5.4
Probab=98.40 E-value=2.3e-06 Score=91.61 Aligned_cols=148 Identities=19% Similarity=0.183 Sum_probs=94.2
Q ss_pred CCCChhHHHHHHHHHHHHHHhHHcCCCCCCcEEEEEeCCccCCCCChHHHHHHHHHhhhccEEEEEEccCcccCCc----
Q 005260 354 AVDPNSGTAALLEVAQRLNKLQKRGWKPRRTIVLCNWDAEEYGLIGSTEWVEENREMLASRAVAYLNIDSAVHEAG---- 429 (705)
Q Consensus 354 A~DnaSG~A~lLElAr~l~~l~~~g~~p~rtI~Fv~~~~EE~Gl~GS~~~~~~~~~~l~~~~va~iNlD~~g~g~~---- 429 (705)
+.||-.|+++++++++.+.+. .+..++.|+++..||.|+.|+..-... ...+ +.|.+|+...+..
T Consensus 167 ~~D~k~g~aa~l~al~~l~~~-----~~~~~~~~~~t~~EEvG~~Ga~~~~~~----i~~~--~~i~~D~~~~~~~~~~~ 235 (348)
T 1ylo_A 167 AFDDRLSCYLLVTLLRELHDA-----ELPAEVWLVASSSEEVGLRGGQTATRA----VSPD--VAIVLDTACWAKNFDYG 235 (348)
T ss_dssp THHHHHHHHHHHHHHHHHTTC-----CCSSEEEEEEESCCTTSSHHHHHHHHH----HCCS--EEEEECCCCCSSTTCCS
T ss_pred CcccHHHHHHHHHHHHHhhhc-----CCCceEEEEEEcccccchhHHHHhhcc----cCCC--EEEEEeccccCCCCCCC
Confidence 367788999999999886532 356899999999999999998764332 2223 3477787654310
Q ss_pred ------------c-----ccccChhHHHHHHHHHHHcCCCCCCccchhhccccCCCCCcc-ccCCCCCCchHHHHh-cCC
Q 005260 430 ------------F-----HASATPQLDELLKQAAKQVQDPDNSSQTIYDSWTGSSNSPVI-GRLGGGGSDYAAFIQ-HIG 490 (705)
Q Consensus 430 ------------l-----~~~~sp~l~~l~~~~~~~v~~p~~~~~~l~~~~~~~~~~~~~-~~~g~~~SD~~~F~~-~~G 490 (705)
+ ....++.+...+.+++++..-|. .. ...+ ++||...|.. ..|
T Consensus 236 ~~~~~~~~~G~~i~~~~~~~~~~~~l~~~~~~~a~~~gi~~-----------------~~~~~~~-ggsDa~~~~~~~~g 297 (348)
T 1ylo_A 236 AANHRQIGNGPMLVLSDKSLIAPPKLTAWIETVAAEIGVPL-----------------QADMFSN-GGTDGGAVHLTGTG 297 (348)
T ss_dssp TTCCCCTTSCCEEEEECSSCBCCHHHHHHHHHHHHHHTCCC-----------------EEEECSS-CCCHHHHHHTSTTC
T ss_pred ccccccCCCCcEEEEeCCCCCCCHHHHHHHHHHHHHcCCCe-----------------EEeecCC-CcchHHHHHHhcCC
Confidence 0 12244667777777776543221 11 1124 7899988853 359
Q ss_pred ceEEEeeeCCCCCCCCCCccchHHHHhhCCcchHHHHHHHHHHHHHHHHhC
Q 005260 491 VPVADMSFGTGYPVYHSMYDDFIWMEKFGDPTFQRHVAAASMWGLVALQLA 541 (705)
Q Consensus 491 IPs~~l~~~~~~p~yHt~~Dt~~~l~~~~dp~~~~~~~~a~~~~~l~~~La 541 (705)
||++.++-.. ...||+....+. ......++++..++.+++
T Consensus 298 ipt~~lg~~~--~~~Hs~~E~~~~---------~d~~~~~~ll~~~~~~l~ 337 (348)
T 1ylo_A 298 VPTLVMGPAT--RHGHCAASIADC---------RDILQMEQLLSALIQRLT 337 (348)
T ss_dssp CCEEEEECCC--BSCSSSCEEEEH---------HHHHHHHHHHHHHHHTCC
T ss_pred CCEEEECccc--CcCCCcceEeeH---------HHHHHHHHHHHHHHHHhh
Confidence 9999886543 347998765432 223456667777776653
No 27
>1vho_A Endoglucanase; structural genomics, unknown function; HET: MSE; 1.86A {Thermotoga maritima} SCOP: b.49.3.1 c.56.5.4
Probab=98.31 E-value=1.6e-06 Score=92.83 Aligned_cols=150 Identities=17% Similarity=0.124 Sum_probs=90.9
Q ss_pred CCChhHHHHHHHHHHHHHHhHHcCCCCCCcEEEEEeCCccCCCCChHHHHHHHHHhhhccEEEEEEccCcccCC------
Q 005260 355 VDPNSGTAALLEVAQRLNKLQKRGWKPRRTIVLCNWDAEEYGLIGSTEWVEENREMLASRAVAYLNIDSAVHEA------ 428 (705)
Q Consensus 355 ~DnaSG~A~lLElAr~l~~l~~~g~~p~rtI~Fv~~~~EE~Gl~GS~~~~~~~~~~l~~~~va~iNlD~~g~g~------ 428 (705)
.||-.|+++++++++.+.+. ++..++.|+++..||.|+.|+..-+. .+...+ .|.+|+...+.
T Consensus 171 ~D~r~g~aa~l~al~~l~~~-----~~~~~~~~~~t~~EEvG~~Ga~~~~~----~i~~~~--~i~~D~~~~~~~~~~~~ 239 (346)
T 1vho_A 171 LDNRASCGVLVKVLEFLKRY-----DHPWDVYVVFSVQEETGCLGALTGAY----EINPDA--AIVMDVTFASEPPFSDH 239 (346)
T ss_dssp HHHHHHHHHHHHHHHHHTTC-----CCSSEEEEEEECTTSSSHHHHHHTTC----CCCCSE--EEEEEEECCCCTTSCCC
T ss_pred CccHHHHHHHHHHHHHhhhc-----CCCceEEEEEECCcccchhhHHHHhc----ccCCCE--EEEeecccccCCCCCcc
Confidence 67788999999999886532 35579999999999999988865221 122233 36666654331
Q ss_pred -------cc--ccccChhHHHHHHHHHHHcCCCCCCccchhhccccCCCCCccccC-CCCCCchHHHHh-cCCceEEEee
Q 005260 429 -------GF--HASATPQLDELLKQAAKQVQDPDNSSQTIYDSWTGSSNSPVIGRL-GGGGSDYAAFIQ-HIGVPVADMS 497 (705)
Q Consensus 429 -------~l--~~~~sp~l~~l~~~~~~~v~~p~~~~~~l~~~~~~~~~~~~~~~~-g~~~SD~~~F~~-~~GIPs~~l~ 497 (705)
.+ ....++.+.+.+.+++++..-|. ..... |.++||...|.. ..|||+++++
T Consensus 240 ~~~~~g~~i~~~~~~~~~l~~~~~~~a~~~gi~~-----------------~~~~~~g~ggsDa~~~~~~~~gipt~~lg 302 (346)
T 1vho_A 240 IELGKGPVIGLGPVVDRNLVQKIIEIAKKHNVSL-----------------QEEAVGGRSGTETDFVQLVRNGVRTSLIS 302 (346)
T ss_dssp CCTTSCCEEECSTTSCHHHHHHHHHHHHHTTCCC-----------------EEESSCCC----CTTHHHHHTTCEEEEEE
T ss_pred cccCCCceEEeCCcCCHHHHHHHHHHHHHCCCCE-----------------EEEeCCCCCCchHHHHHHhCCCCcEEEEe
Confidence 11 11256677788888877643221 11111 226789887742 3699999987
Q ss_pred eCCCCCCCCCCccchHHHHhhCCcchHHHHHHHHHHHHHHHHhCCC
Q 005260 498 FGTGYPVYHSMYDDFIWMEKFGDPTFQRHVAAASMWGLVALQLADE 543 (705)
Q Consensus 498 ~~~~~p~yHt~~Dt~~~l~~~~dp~~~~~~~~a~~~~~l~~~La~~ 543 (705)
-... ..||+....+. +.....++++..++.+++..
T Consensus 303 ~~~~--~~Hs~~E~~~~---------~dl~~~~~ll~~~~~~~~~~ 337 (346)
T 1vho_A 303 IPLK--YMHTPVEMVDP---------RDVEELARLLSLVAVELEVE 337 (346)
T ss_dssp EECB--STTSTTEEECH---------HHHHHHHHHHHHHHHHCC--
T ss_pred hhhc--ccccHHHhcCH---------HHHHHHHHHHHHHHHHhhhh
Confidence 6433 47998765432 22446677888887777653
No 28
>1cg2_A Carboxypeptidase G2; metallocarboxypeptidase, hydrolase; 2.50A {Pseudomonas SP} SCOP: c.56.5.4 d.58.19.1
Probab=98.28 E-value=2.5e-06 Score=92.93 Aligned_cols=79 Identities=28% Similarity=0.408 Sum_probs=67.5
Q ss_pred eeEEEEecCCCCCCcEEEEeeccCCcC-------------------CCCCCChhHHHHHHHHHHHHHHhHHcCCCCCCcE
Q 005260 325 QNVIGIIPGTEEPDRLVILGNHRDAWT-------------------FGAVDPNSGTAALLEVAQRLNKLQKRGWKPRRTI 385 (705)
Q Consensus 325 ~NVia~i~G~~~p~~~ViigaH~Ds~~-------------------~GA~DnaSG~A~lLElAr~l~~l~~~g~~p~rtI 385 (705)
.||+|+++|.. .+.|++.+|+|+++ .|+.|+.+|++++|++++.|.+. +.++.++|
T Consensus 71 ~~v~a~~~g~~--~~~i~l~aH~D~vp~~~~~~~~Pf~~~~g~l~grG~~D~k~~~a~~l~a~~~l~~~---~~~~~~~v 145 (393)
T 1cg2_A 71 DNIVGKIKGRG--GKNLLLMSHMDTVYLKGILAKAPFRVEGDKAYGPGIADDKGGNAVILHTLKLLKEY---GVRDYGTI 145 (393)
T ss_dssp EEEEEEEECSS--CCCEEEEEECCBSCCTTHHHHSCCEEETTEEECTTTTTTHHHHHHHHHHHHHHHHT---TCCCSSEE
T ss_pred CeEEEEECCCC--CceEEEEEecCcCCCCCccccCCeeeeCCEEEcCCcccchHHHHHHHHHHHHHHhc---CCCCCCCE
Confidence 59999998754 36799999999974 27789999999999999998763 45677799
Q ss_pred EEEEeCCccCCCCChHHHHHHHH
Q 005260 386 VLCNWDAEEYGLIGSTEWVEENR 408 (705)
Q Consensus 386 ~Fv~~~~EE~Gl~GS~~~~~~~~ 408 (705)
+|+++.+||.|..|+..++++..
T Consensus 146 ~~~~~~~EE~g~~G~~~~~~~~~ 168 (393)
T 1cg2_A 146 TVLFNTDEEKGSFGSRDLIQEEA 168 (393)
T ss_dssp EEEEESCGGGTTTTTHHHHHHHH
T ss_pred EEEEEcccccCCccHHHHHHHHh
Confidence 99999999999999999988653
No 29
>2pok_A Peptidase, M20/M25/M40 family; M20 family peptidase, metallo protein, MCSG, structural GENO PSI-2, protein structure initiative; HET: BGC; 1.90A {Streptococcus pneumoniae}
Probab=98.25 E-value=2.6e-06 Score=95.38 Aligned_cols=96 Identities=17% Similarity=0.100 Sum_probs=74.6
Q ss_pred eeeEEEEecCCCCCCcEEEEeeccCCcC-----------------------CCCCCChhHHHHHHHHHHHHHHhHHcCCC
Q 005260 324 IQNVIGIIPGTEEPDRLVILGNHRDAWT-----------------------FGAVDPNSGTAALLEVAQRLNKLQKRGWK 380 (705)
Q Consensus 324 ~~NVia~i~G~~~p~~~ViigaH~Ds~~-----------------------~GA~DnaSG~A~lLElAr~l~~l~~~g~~ 380 (705)
..||+|+++|...+.+.|++.+|+|+++ .|+.|+.+|+|++|++++.|.+. +.+
T Consensus 92 ~~~v~a~~~g~~~~~~~i~l~aH~D~vp~~~~~~w~~~pf~~~~~~g~l~grG~~D~k~g~a~~l~a~~~l~~~---~~~ 168 (481)
T 2pok_A 92 APFVMAHFKSSRPDAKTLIFYNHYDTVPADGDQVWTEDPFTLSVRNGFMYGRGVDDDKGHITARLSALRKYMQH---HDD 168 (481)
T ss_dssp SCEEEEEECCSSTTCCEEEEEEECCCCCSCSSCCCSSCTTSCEEETTEEESTTTTTTHHHHHHHHHHHHHHHHT---CSS
T ss_pred CcEEEEEecCCCCCCCeEEEEEeccCcCCCCccccccCCCCceeeCCeEEccccccCcHHHHHHHHHHHHHHHh---cCC
Confidence 5799999997633467899999999842 17899999999999999998764 226
Q ss_pred CCCcEEEEEeCCccCCCCChHHHHHHHHHhhhccEEEEEEccC
Q 005260 381 PRRTIVLCNWDAEEYGLIGSTEWVEENREMLASRAVAYLNIDS 423 (705)
Q Consensus 381 p~rtI~Fv~~~~EE~Gl~GS~~~~~~~~~~l~~~~va~iNlD~ 423 (705)
++++|+|+++.+||.|..|+..+++++...+. .+-+.|+.|.
T Consensus 169 ~~~~v~~~~~~~EE~g~~g~~~~~~~~~~~~~-~~d~~i~~~~ 210 (481)
T 2pok_A 169 LPVNISFIMEGAEESASTDLDKYLEKHADKLR-GADLLVWEQG 210 (481)
T ss_dssp CSSEEEEEEESCGGGTTTTHHHHHHHHHHHHT-TCSEEECSCC
T ss_pred CCCCEEEEEecccccCchhHHHHHHHhHhhcc-CCCEEEECCC
Confidence 78999999999999999999999887643232 1333455553
No 30
>2zog_A Cytosolic non-specific dipeptidase; metallopeptidase, protein-inhibitor complex, CNDP2, CNDP DIP 2, bestatin, L-carnosine, carnosinase, Zn; HET: BES; 1.70A {Mus musculus} PDB: 2zof_A*
Probab=98.20 E-value=3.8e-06 Score=93.87 Aligned_cols=95 Identities=17% Similarity=0.180 Sum_probs=74.1
Q ss_pred eeEEEEecCCCCCCcEEEEeeccCCcC-----------------------CCCCCChhHHHHHHHHHHHHHHhHHcCCCC
Q 005260 325 QNVIGIIPGTEEPDRLVILGNHRDAWT-----------------------FGAVDPNSGTAALLEVAQRLNKLQKRGWKP 381 (705)
Q Consensus 325 ~NVia~i~G~~~p~~~ViigaH~Ds~~-----------------------~GA~DnaSG~A~lLElAr~l~~l~~~g~~p 381 (705)
.||+|+++|.. +.+.|++.+|+|+++ .|+.|+.+|+|++|++++.|.+. +.++
T Consensus 83 ~~v~a~~~~~~-~~~~i~l~aH~D~vp~~~~~~w~~~Pf~~~~~~g~l~grGa~D~K~g~a~~l~a~~~l~~~---~~~~ 158 (479)
T 2zog_A 83 PILLGKLGSDP-QKKTVCIYGHLDVQPAALEDGWDSEPFTLVEREGKLYGRGSTDDKGPVAGWMNALEAYQKT---GQEI 158 (479)
T ss_dssp CEEEEEECCCT-TSCEEEEEEECCBCCCCGGGTCSSCTTSCEEETTEEESTTTTTTHHHHHHHHHHHHHHHHT---TCCC
T ss_pred CEEEEEecCCC-CCCeEEEEEecCCCCCCccccCcCCCCcceeECCEEEeeccccChHHHHHHHHHHHHHHHh---CCCC
Confidence 79999997643 357899999999752 17799999999999999998753 4578
Q ss_pred CCcEEEEEeCCccCCCCChHHHHHHHHHhhhccEEEEEEccC
Q 005260 382 RRTIVLCNWDAEEYGLIGSTEWVEENREMLASRAVAYLNIDS 423 (705)
Q Consensus 382 ~rtI~Fv~~~~EE~Gl~GS~~~~~~~~~~l~~~~va~iNlD~ 423 (705)
+++|+|+++.+||.|..|+..++++....+..++-+.+.+|.
T Consensus 159 ~~~v~~~~~~~EE~g~~Ga~~~~~~~~~~~~~~~d~~i~~e~ 200 (479)
T 2zog_A 159 PVNLRFCLEGMEESGSEGLDELIFAQKDKFFKDVDYVCISDN 200 (479)
T ss_dssp SSEEEEEEESCGGGTCTTHHHHHHHTTTTTTTTCCEEEECCC
T ss_pred CCcEEEEEecccccCCccHHHHHHhhhhhhcccCCEEEEeCC
Confidence 899999999999999999999988753322223445555663
No 31
>3ct9_A Acetylornithine deacetylase; NP_812461.1, A putative zinc peptidase, peptidase family M20 structural genomics; 2.31A {Bacteroides thetaiotaomicron vpi-5482}
Probab=98.20 E-value=2.1e-06 Score=92.40 Aligned_cols=79 Identities=20% Similarity=0.222 Sum_probs=66.4
Q ss_pred eeeEEEEecCCCCCCcEEEEeeccCCcC---------------------CCCCCChhHHHHHHHHHHHHHHhHHcCCCCC
Q 005260 324 IQNVIGIIPGTEEPDRLVILGNHRDAWT---------------------FGAVDPNSGTAALLEVAQRLNKLQKRGWKPR 382 (705)
Q Consensus 324 ~~NVia~i~G~~~p~~~ViigaH~Ds~~---------------------~GA~DnaSG~A~lLElAr~l~~l~~~g~~p~ 382 (705)
..||+|+++|...+.+.|++.+|+|+.+ .|+.|+.+|++++|++++.|.+. + ++
T Consensus 52 ~~nv~a~~~g~~~~~~~i~l~aH~D~vp~~~~w~~~p~~~~~~~g~~~g~G~~D~k~g~a~~l~a~~~l~~~---~--~~ 126 (356)
T 3ct9_A 52 GNNVWCLSPMFDLKKPTILLNSHIDTVKPVNGWRKDPFTPREENGKLYGLGSNDAGASVVSLLQVFLQLCRT---S--QN 126 (356)
T ss_dssp TTEEEEECSSCCTTSCEEEEEEECCBCCCC-------CCCEECSSEEESTTTTTTHHHHHHHHHHHHHHTTS---C--CS
T ss_pred eeeEEEEEecCCCCCCeEEEEccccccCCCCCCCCCCCccEEECCEEEecCcccchHHHHHHHHHHHHHHhc---C--CC
Confidence 6799999998433357899999999853 17779999999999999988653 3 78
Q ss_pred CcEEEEEeCCccC-CCCChHHHHHHH
Q 005260 383 RTIVLCNWDAEEY-GLIGSTEWVEEN 407 (705)
Q Consensus 383 rtI~Fv~~~~EE~-Gl~GS~~~~~~~ 407 (705)
++|+|+++.+||. |..|+..++++.
T Consensus 127 ~~v~~~~~~~EE~~g~~G~~~~~~~~ 152 (356)
T 3ct9_A 127 YNLIYLASCEEEVSGKEGIESVLPGL 152 (356)
T ss_dssp SEEEEEEECCGGGTCTTTHHHHGGGS
T ss_pred CCEEEEEEeCcccCCccCHHHHHhhC
Confidence 9999999999999 899999988764
No 32
>3dlj_A Beta-Ala-His dipeptidase; CNDP1, carnosine dipeptidase 1, structural genomics, structu genomics consortium, SGC, metallopeptidase M20 family; 2.26A {Homo sapiens}
Probab=98.16 E-value=5.9e-06 Score=92.66 Aligned_cols=95 Identities=18% Similarity=0.139 Sum_probs=75.0
Q ss_pred eeEEEEecCCCCCCcEEEEeeccCCcC-----------------------CCCCCChhHHHHHHHHHHHHHHhHHcCCCC
Q 005260 325 QNVIGIIPGTEEPDRLVILGNHRDAWT-----------------------FGAVDPNSGTAALLEVAQRLNKLQKRGWKP 381 (705)
Q Consensus 325 ~NVia~i~G~~~p~~~ViigaH~Ds~~-----------------------~GA~DnaSG~A~lLElAr~l~~l~~~g~~p 381 (705)
.||+|++.|.. +.+.|++.+|+|+++ .|+.|+.+|++++|++++.|.+. +.++
T Consensus 90 ~~v~a~~~~~~-~~~~i~l~aH~D~vp~~~~~~w~~~Pf~~~~~~g~l~grG~~D~k~~~a~~l~a~~~l~~~---~~~~ 165 (485)
T 3dlj_A 90 PVILAELGSDP-TKGTVCFYGHLDVQPADRGDGWLTDPYVLTEVDGKLYGRGATDNKGPVLAWINAVSAFRAL---EQDL 165 (485)
T ss_dssp CEEEEEECCCT-TSCEEEEEEECCBCCCCGGGTCSSCTTSCEEETTEEESTTTTTTHHHHHHHHHHHHHHHHT---TCCC
T ss_pred cEEEEEECCCC-CCCEEEEEeeecCCCCCCcccCCCCCCccEEECCEEEecccccCcHHHHHHHHHHHHHHHh---CCCC
Confidence 58999996542 367899999999852 28899999999999999998764 4578
Q ss_pred CCcEEEEEeCCccCCCCChHHHHHHHHHhhhccEEEEEEccC
Q 005260 382 RRTIVLCNWDAEEYGLIGSTEWVEENREMLASRAVAYLNIDS 423 (705)
Q Consensus 382 ~rtI~Fv~~~~EE~Gl~GS~~~~~~~~~~l~~~~va~iNlD~ 423 (705)
+++|+|++..+||.|..|+..++++....+.+++-+.|.+|.
T Consensus 166 ~~~v~~~~~~~EE~g~~g~~~~~~~~~~~~~~~~d~~~~~~~ 207 (485)
T 3dlj_A 166 PVNIKFIIEGMEEAGSVALEELVEKEKDRFFSGVDYIVISDN 207 (485)
T ss_dssp SSEEEEEEESCGGGTTTTHHHHHHHHTTTTSTTCCEEEECCC
T ss_pred CccEEEEEEcccccCCccHHHHHHhhhhhcccCCCEEEEcCC
Confidence 899999999999999999999998764322234555566663
No 33
>1z2l_A Allantoate amidohydrolase; ALLC, purine cataboli allantoin utilization, structural genomics, PSI, Pro structure initiative; HET: 1AL; 2.25A {Escherichia coli} SCOP: c.56.5.4 d.58.19.1 PDB: 2imo_A
Probab=98.11 E-value=2.3e-06 Score=94.09 Aligned_cols=78 Identities=28% Similarity=0.314 Sum_probs=66.3
Q ss_pred eeEEEEecCCCCCCcEEEEeeccCCcCC-CCCCChhHHHHHHHHHHHHHHhHHcCCCCCCcEEEEEeCCccC-----CCC
Q 005260 325 QNVIGIIPGTEEPDRLVILGNHRDAWTF-GAVDPNSGTAALLEVAQRLNKLQKRGWKPRRTIVLCNWDAEEY-----GLI 398 (705)
Q Consensus 325 ~NVia~i~G~~~p~~~ViigaH~Ds~~~-GA~DnaSG~A~lLElAr~l~~l~~~g~~p~rtI~Fv~~~~EE~-----Gl~ 398 (705)
.||+|+++|..+..+.|++.+|+|+++. |..|+..|++++|++++.|.+. +.+++++|+|+++.+||. |+.
T Consensus 62 gnv~a~~~g~~~~~~~i~l~~H~D~Vp~~g~~D~k~g~a~~l~a~~~l~~~---~~~~~~~v~~i~~~~EE~~~~~~g~~ 138 (423)
T 1z2l_A 62 GNLYGRLNGTEYPQEVVLSGSHIDTVVNGGNLDGQFGALAAWLAIDWLKTQ---YGAPLRTVEVVAMAEEEGSRFPYVFW 138 (423)
T ss_dssp SCEEEEECCSSEEEEEEEEEEECCCCTTBCSSTTHHHHHHHHHHHHHHHHH---HCSCSEEEEEEEESCSSCCSSSCSCH
T ss_pred CcEEEEEcCCCCCCCEEEEEEecCCCCCCCccCCHHHHHHHHHHHHHHHHc---CCCCCCCEEEEEEcCccccccCCCcc
Confidence 4999999986422378999999999987 8899999999999999998764 347889999999999997 567
Q ss_pred ChHHHHH
Q 005260 399 GSTEWVE 405 (705)
Q Consensus 399 GS~~~~~ 405 (705)
||..+.+
T Consensus 139 Gs~~~~~ 145 (423)
T 1z2l_A 139 GSKNIFG 145 (423)
T ss_dssp HHHHHTT
T ss_pred cHHHHHc
Confidence 8887664
No 34
>3cpx_A Aminopeptidase, M42 family; YP_676701.1, putative M42 glutamyl aminopeptidase, structura genomics; 2.39A {Cytophaga hutchinsonii atcc 33406}
Probab=98.08 E-value=7.9e-06 Score=86.68 Aligned_cols=144 Identities=13% Similarity=-0.018 Sum_probs=87.9
Q ss_pred CCCChhHHHHHHHHHHHHHHhHHcCCCCCCcEEEEEeCCccCCCCChHHHHHHHHHhhhccEEEEEEccCcccCC-----
Q 005260 354 AVDPNSGTAALLEVAQRLNKLQKRGWKPRRTIVLCNWDAEEYGLIGSTEWVEENREMLASRAVAYLNIDSAVHEA----- 428 (705)
Q Consensus 354 A~DnaSG~A~lLElAr~l~~l~~~g~~p~rtI~Fv~~~~EE~Gl~GS~~~~~~~~~~l~~~~va~iNlD~~g~g~----- 428 (705)
+.||-+|++++|++++.+ ++ |.|++++.||.|+.|+.....-..... +.-+.|++|+...+.
T Consensus 163 ~~D~k~G~aa~l~al~~l--------~~---i~~~~t~~EEvG~~Ga~~a~~~~~~~~--~~~~~i~~D~~~~~~~~~~~ 229 (321)
T 3cpx_A 163 YLDDRLGVWTALELAKTL--------EH---GIIAFTCWEEHGGGSVAYLARWIYETF--HVKQSLICDITWVTEGVEAG 229 (321)
T ss_dssp THHHHHHHHHHHHHTTTC--------CS---EEEEEESSTTTTCCSHHHHHHHHHHHH--CCCEEEECCCEECCSSSCTT
T ss_pred CCcCHHHHHHHHHHHHHh--------cC---cEEEEECCccCchhcchhhhhcccccc--CCCEEEEEeCccccCCcccC
Confidence 478889999999998753 22 899999999999999985321111112 233568888764321
Q ss_pred ---cc----ccccChhHHHHHHHHHHHcCCCCCCccchhhccccCCCCCccc-cCCCCCCchHHHHh-cCCceEEEeeeC
Q 005260 429 ---GF----HASATPQLDELLKQAAKQVQDPDNSSQTIYDSWTGSSNSPVIG-RLGGGGSDYAAFIQ-HIGVPVADMSFG 499 (705)
Q Consensus 429 ---~l----~~~~sp~l~~l~~~~~~~v~~p~~~~~~l~~~~~~~~~~~~~~-~~g~~~SD~~~F~~-~~GIPs~~l~~~ 499 (705)
.+ ....++.+.+.+.+++++..-| .... ..+ +|||-.++.. ..|||++.++-.
T Consensus 230 ~G~~i~~~~~~~~~~~l~~~~~~~a~~~gi~-----------------~q~~~~~~-GGsD~~~~~~s~~Gipt~~lG~~ 291 (321)
T 3cpx_A 230 KGVAISMRDRMIPRKKYVNRIIELARQTDIP-----------------FQLEVEGA-GASDGRELQLSPYPWDWCFIGAP 291 (321)
T ss_dssp SCEEEEEESSSCCCHHHHHHHHHHHTTSSCC-----------------EEEEECSS-CCCHHHHHHHSSSCCBCCBEECE
T ss_pred CCcEEEECCCCCCCHHHHHHHHHHHHHcCCC-----------------EEEEeCCC-CCccHHHHHHhCCCCCEEEEchh
Confidence 11 1224566777777776643221 1111 134 7899887742 469999987654
Q ss_pred CCCCCCCCCccchHHHHhhCCcchHHHHHHHHHHHHHHHH
Q 005260 500 TGYPVYHSMYDDFIWMEKFGDPTFQRHVAAASMWGLVALQ 539 (705)
Q Consensus 500 ~~~p~yHt~~Dt~~~l~~~~dp~~~~~~~~a~~~~~l~~~ 539 (705)
. -..||+......- .....++++..++.+
T Consensus 292 ~--~~~Hs~~E~~~~~---------dl~~~~~ll~~~~~~ 320 (321)
T 3cpx_A 292 E--KDAHTPNECVHKK---------DIESMVGLYKYLMEK 320 (321)
T ss_dssp E--BSTTSTTCEEEHH---------HHHHHHHHHHHHHHH
T ss_pred h--cccchhhhheeHH---------HHHHHHHHHHHHHHh
Confidence 3 2469988765421 233445566555543
No 35
>2vpu_A TET3, 354AA long hypothetical operon protein FRV; unknown function, protease, thermophilic, SELF-compartmentalising, hydrolase; 1.9A {Pyrococcus horikoshii} PDB: 2wzn_A 2pe3_A
Probab=98.07 E-value=3.1e-05 Score=83.13 Aligned_cols=153 Identities=18% Similarity=0.129 Sum_probs=99.5
Q ss_pred CCCCChhHHHHHHHHHHHHHHhHHcCCCCCCcEEEEEeCCccCCCCChHHHHHHHHHhhhccEEEEEEccCcccC-C---
Q 005260 353 GAVDPNSGTAALLEVAQRLNKLQKRGWKPRRTIVLCNWDAEEYGLIGSTEWVEENREMLASRAVAYLNIDSAVHE-A--- 428 (705)
Q Consensus 353 GA~DnaSG~A~lLElAr~l~~l~~~g~~p~rtI~Fv~~~~EE~Gl~GS~~~~~~~~~~l~~~~va~iNlD~~g~g-~--- 428 (705)
.+-||-.|++++||+++.+. .+..++.|++.+-||.|+.|++.-.... ..+ ..|.+|+.-.+ +
T Consensus 182 ~~lDnr~g~~~~l~~l~~l~-------~~~~~v~~~ft~qEEVG~~ga~~aa~~i----~pd--~~i~~Dv~~a~dp~~~ 248 (354)
T 2vpu_A 182 PYLDDRICLYAMIEAARQLG-------DHEADIYIVGSVQEEVGLRGARVASYAI----NPE--VGIAMDVTFAKQPHDK 248 (354)
T ss_dssp TTHHHHHHHHHHHHHHHHCC-------CCSSEEEEEECSCCTTTSHHHHHHHHHH----CCS--EEEEEEEEECCCTTST
T ss_pred ecCccHHHHHHHHHHHHHhh-------cCCCeEEEEEECCcccCccchhhhhccc----CCC--EEEEecccccCCCCcc
Confidence 78899999999999988642 2679999999999999999987533222 223 35566664221 1
Q ss_pred -----cc--------ccccChhHHHHHHHHHHHcCCCCCCccchhhccccCCCCCccccCCCCCCchHHHHh-cCCceEE
Q 005260 429 -----GF--------HASATPQLDELLKQAAKQVQDPDNSSQTIYDSWTGSSNSPVIGRLGGGGSDYAAFIQ-HIGVPVA 494 (705)
Q Consensus 429 -----~l--------~~~~sp~l~~l~~~~~~~v~~p~~~~~~l~~~~~~~~~~~~~~~~g~~~SD~~~F~~-~~GIPs~ 494 (705)
.+ ....+|.+.+.+.+++++..-|.. . .+ ..+++|||-.++.. ..|||++
T Consensus 249 ~~~~~~lg~Gpv~d~~~~~~~~l~~~l~~~a~~~gIp~q---~------------~~-~~g~gGtDa~~i~~a~~Gipt~ 312 (354)
T 2vpu_A 249 GKIVPELGKGPVMDVGPNINPKLRAFADEVAKKYEIPLQ---V------------EP-SPRPTGTDANVMQINKEGVATA 312 (354)
T ss_dssp TCCCCCTTSCCEEEESTTSCHHHHHHHHHHHHHTTCCCE---E------------EE-CCSCCSSTHHHHHTSTTCCEEE
T ss_pred cccCceECCcceEcCCCCCCHHHHHHHHHHHHHcCCCcE---E------------Ee-CCCCCccHHHHHHHhcCCCCEE
Confidence 11 123467888888888886543321 0 01 11215899988853 3599999
Q ss_pred EeeeCCCCCCCCCCccchHHHHhhCCcchHHHHHHHHHHHHHHHHhCCCCC
Q 005260 495 DMSFGTGYPVYHSMYDDFIWMEKFGDPTFQRHVAAASMWGLVALQLADEEF 545 (705)
Q Consensus 495 ~l~~~~~~p~yHt~~Dt~~~l~~~~dp~~~~~~~~a~~~~~l~~~La~~~~ 545 (705)
+++.... +.||+......- -....++++..++.+|+...+
T Consensus 313 ~Igvp~~--~~Hs~~E~~~~~---------D~~~~~~ll~~~l~~l~~~~~ 352 (354)
T 2vpu_A 313 VLSIPIR--YMHSQVELADAR---------DVDNTIKLAKALLEELKPMDF 352 (354)
T ss_dssp EEEEEEB--STTSTTCEEEHH---------HHHHHHHHHHHHHHHCCCCCC
T ss_pred EECcccc--cCcCcceEeeHH---------HHHHHHHHHHHHHHhccHhhc
Confidence 9876433 378887665421 234566788888888876543
No 36
>2v8h_A Beta-alanine synthase; amidohydrolase, alpha and beta protein, DI-zinc center, COMP N-carbamyl-beta-alanine, hydrolase; HET: BCN; 2.0A {Saccharomyces kluyveri} PDB: 2v8d_A* 2vl1_A 2v8g_A 2v8v_A 1r43_A 1r3n_A
Probab=98.06 E-value=8e-06 Score=91.31 Aligned_cols=78 Identities=26% Similarity=0.400 Sum_probs=66.8
Q ss_pred eeeEEEEecCCCCCCcEEEEeeccCCcCC-CCCCChhHHHHHHHHHHHHHHhHHcCCCCCCcEEEEEeCCccC-----CC
Q 005260 324 IQNVIGIIPGTEEPDRLVILGNHRDAWTF-GAVDPNSGTAALLEVAQRLNKLQKRGWKPRRTIVLCNWDAEEY-----GL 397 (705)
Q Consensus 324 ~~NVia~i~G~~~p~~~ViigaH~Ds~~~-GA~DnaSG~A~lLElAr~l~~l~~~g~~p~rtI~Fv~~~~EE~-----Gl 397 (705)
..||+|+++|.. +.+.|++.+|+|+++. |..|+..|++++|++++.|.+. +.+++++|+|+++.+||. |+
T Consensus 92 ~gnvia~~~g~~-~~~~i~l~~H~DtVp~~g~~D~k~gvaa~L~a~~~L~~~---~~~~~~~v~lif~~dEE~~~~~~g~ 167 (474)
T 2v8h_A 92 IGNMFAVYPGKN-GGKPTATGSHLDTQPEAGKYDGILGVLAGLEVLRTFKDN---NYVPNYDVCVVVWFNAEGARFARSC 167 (474)
T ss_dssp TCCEEEEECCSS-CCSCEEEEECCCCCSSBCSSTTHHHHHHHHHHHHHHHHH---TCCCSSCEEEEECTTCSCSSSSCTT
T ss_pred CceEEEEECCCC-CCCeEEEEEecccCCCCCCcCCHHHHHHHHHHHHHHHHc---CCCCCCCEEEEEECCccCCCCCCCc
Confidence 459999999865 2458999999999987 7789999999999999998764 557889999999999998 77
Q ss_pred CChHHHHH
Q 005260 398 IGSTEWVE 405 (705)
Q Consensus 398 ~GS~~~~~ 405 (705)
.||..+++
T Consensus 168 ~Gs~~l~~ 175 (474)
T 2v8h_A 168 TGSSVWSH 175 (474)
T ss_dssp HHHHHHTT
T ss_pred ccHHHHHh
Confidence 89988764
No 37
>3pfo_A Putative acetylornithine deacetylase; metal binding, merops M20A family, amino-acid biosynthesis, metallopeptidase; 1.90A {Rhodopseudomonas palustris}
Probab=98.04 E-value=6e-06 Score=90.94 Aligned_cols=80 Identities=20% Similarity=0.227 Sum_probs=67.3
Q ss_pred eeeeEEEEecCCCCCCcEEEEeeccCCcCC-----------------------CCCCChhHHHHHHHHHHHHHHhHHcCC
Q 005260 323 TIQNVIGIIPGTEEPDRLVILGNHRDAWTF-----------------------GAVDPNSGTAALLEVAQRLNKLQKRGW 379 (705)
Q Consensus 323 ~~~NVia~i~G~~~p~~~ViigaH~Ds~~~-----------------------GA~DnaSG~A~lLElAr~l~~l~~~g~ 379 (705)
...||+|+++|.. +.+.|++.+|+|+++. |+.|+.+|+|++|++++.|.+. +.
T Consensus 89 ~~~~via~~~g~~-~~~~v~l~aH~D~vp~~~~~~w~~~pf~~~~~~g~~~g~G~~D~k~~~a~~l~a~~~l~~~---~~ 164 (433)
T 3pfo_A 89 GSMQVVATADSDG-KGRSLILQGHIDVVPEGPVDLWSDPPYEAKVRDGWMIGRGAQDMKGGVSAMIFALDAIRTA---GY 164 (433)
T ss_dssp GCEEEEEEECCCC-CSCCEEEEEECCBCCCCCGGGCSSCTTTCCEETTEEECTTTTTTHHHHHHHHHHHHHHHHT---TE
T ss_pred CCcEEEEEEecCC-CCCEEEEEcccCCcCCCCcccCCCCCCCcEEECCEEEecchhhhhHHHHHHHHHHHHHHHc---CC
Confidence 3579999999853 4678999999998741 7899999999999999998764 33
Q ss_pred CCCCcEEEEEeCCccCCCCChHHHHHH
Q 005260 380 KPRRTIVLCNWDAEEYGLIGSTEWVEE 406 (705)
Q Consensus 380 ~p~rtI~Fv~~~~EE~Gl~GS~~~~~~ 406 (705)
+++++|+|++..+||.|..|+..++++
T Consensus 165 ~~~~~v~~~~~~~EE~g~~G~~~~~~~ 191 (433)
T 3pfo_A 165 APDARVHVQTVTEEESTGNGALSTLMR 191 (433)
T ss_dssp EESSCEEEEEESCTTTTCHHHHHHHHT
T ss_pred CCCccEEEEEEecCccCChhHHHHHhc
Confidence 678999999999999988899888764
No 38
>3gb0_A Peptidase T; NP_980509.1, aminopeptidase PEPT, peptidase family M20/M25/M structural genomics, joint center for structural genomics; 2.04A {Bacillus cereus atcc 10987}
Probab=97.98 E-value=5.7e-06 Score=89.27 Aligned_cols=77 Identities=26% Similarity=0.358 Sum_probs=64.5
Q ss_pred eeeEEEEecCCCCCCcEEEEeeccCCcCC----------------CC----CCChhHHHHHHHHHHHHHHhHHcCCCCCC
Q 005260 324 IQNVIGIIPGTEEPDRLVILGNHRDAWTF----------------GA----VDPNSGTAALLEVAQRLNKLQKRGWKPRR 383 (705)
Q Consensus 324 ~~NVia~i~G~~~p~~~ViigaH~Ds~~~----------------GA----~DnaSG~A~lLElAr~l~~l~~~g~~p~r 383 (705)
..||+|+++|...+.+.|++.+|+|+.+. |+ .|+..|++++|++++.|.+. + .+++
T Consensus 56 ~~nv~a~~~g~~~~~~~v~l~aH~D~vp~~~~~~p~~~~g~~~g~G~~~~g~D~k~g~a~~l~a~~~l~~~---~-~~~~ 131 (373)
T 3gb0_A 56 AGNLICTLPATKDGVDTIYFTSHMDTVVPGNGIKPSIKDGYIVSDGTTILGADDKAGLASMFEAIRVLKEK---N-IPHG 131 (373)
T ss_dssp SCCEEEEECCSSTTCCCEEEEEECCBCSSCSSCCCEEETTEEECCSSSCCCHHHHHHHHHHHHHHHHHHHT---T-CCCC
T ss_pred ceeEEEEecCCCCCCCEEEEEEECcccCCCCCcCcEEECCEEECCCccccCcccHHHHHHHHHHHHHHHhc---C-CCCC
Confidence 47999999987434678999999999842 55 48999999999999998764 3 3679
Q ss_pred cEEEEEeCCccCCCCChHHHH
Q 005260 384 TIVLCNWDAEEYGLIGSTEWV 404 (705)
Q Consensus 384 tI~Fv~~~~EE~Gl~GS~~~~ 404 (705)
+|+|+++.+||.|..|+..+.
T Consensus 132 ~v~~~~~~~EE~g~~Ga~~~~ 152 (373)
T 3gb0_A 132 TIEFIITVGEESGLVGAKALD 152 (373)
T ss_dssp CEEEEEESCGGGTSHHHHHSC
T ss_pred CEEEEEEeccccCchhhhhhC
Confidence 999999999999999998874
No 39
>2rb7_A Peptidase, M20/M25/M40 family; YP_387682.1, CO-catalytic metallopeptidase, peptidase family M20/M25/M40, structural genomics; HET: MSE PGE PG4; 1.60A {Desulfovibrio desulfuricans subsp}
Probab=97.91 E-value=1.3e-05 Score=86.29 Aligned_cols=90 Identities=20% Similarity=0.097 Sum_probs=69.2
Q ss_pred eeEEEEecCC-CCCCcEEEEeeccCCcC-----------------CCCCCChhHHHHHHHHHHHHHHhHHcCCCC---CC
Q 005260 325 QNVIGIIPGT-EEPDRLVILGNHRDAWT-----------------FGAVDPNSGTAALLEVAQRLNKLQKRGWKP---RR 383 (705)
Q Consensus 325 ~NVia~i~G~-~~p~~~ViigaH~Ds~~-----------------~GA~DnaSG~A~lLElAr~l~~l~~~g~~p---~r 383 (705)
.|+++.++|. ..+.+.|++.+|+|+++ .|+.|+.+|++++|++++.|.+.. .++ ++
T Consensus 51 ~~~~~~~~~~~~~~~~~i~l~aH~D~vp~~~~p~~~~~~~g~~~grG~~D~k~~~a~~l~a~~~l~~~~---~~~~~~~g 127 (364)
T 2rb7_A 51 HDGIPSVMVLPEKGRAGLLLMAHIDVVDAEDDLFVPRVENDRLYGRGANDDKYAVALGLVMFRDRLNAL---KAAGRSQK 127 (364)
T ss_dssp ETTEEEEEECSBTTEEEEEEEEECCCCCCCGGGGSCEEETTEEESTTTTTTHHHHHHHHHHHHHHHHHH---HHTTCCGG
T ss_pred CCCceEEEEEcCCCCCeEEEECccCcCCCCCCCCccEEECCEEEecccccccHHHHHHHHHHHHHHHhC---CCCcccCC
Confidence 6888998863 22357899999999874 168899999999999999998753 244 34
Q ss_pred c--EEEEEeCCccC-CCCChHHHHHHHHHhhhccEEEEEEccC
Q 005260 384 T--IVLCNWDAEEY-GLIGSTEWVEENREMLASRAVAYLNIDS 423 (705)
Q Consensus 384 t--I~Fv~~~~EE~-Gl~GS~~~~~~~~~~l~~~~va~iNlD~ 423 (705)
+ |+|+++.+||. |+.|+..++++. ++.+.|++|.
T Consensus 128 ~~~v~~~~~~~EE~~g~~G~~~~~~~~------~~d~~i~~d~ 164 (364)
T 2rb7_A 128 DMALGLLITGDEEIGGMNGAAKALPLI------RADYVVALDG 164 (364)
T ss_dssp GCCEEEEEESCGGGTSTTTHHHHGGGC------EEEEEEECSS
T ss_pred CccEEEEEEeccccCchhhHHHHHhcC------CCCEEEEccC
Confidence 7 99999999997 678999887654 3445566663
No 40
>3tx8_A Succinyl-diaminopimelate desuccinylase; peptidase, structural genomics, joint center for structural JCSG; 2.97A {Corynebacterium glutamicum}
Probab=97.87 E-value=2.9e-05 Score=83.62 Aligned_cols=78 Identities=24% Similarity=0.262 Sum_probs=66.2
Q ss_pred eeEEEEecCCCCCCcEEEEeeccCCcC----------------CCCCCChhHHHHHHHHHHHHHHhHHcCCCCCCcEEEE
Q 005260 325 QNVIGIIPGTEEPDRLVILGNHRDAWT----------------FGAVDPNSGTAALLEVAQRLNKLQKRGWKPRRTIVLC 388 (705)
Q Consensus 325 ~NVia~i~G~~~p~~~ViigaH~Ds~~----------------~GA~DnaSG~A~lLElAr~l~~l~~~g~~p~rtI~Fv 388 (705)
.||+|+++|.. .+.|++.+|+|+.+ .|+.|+-+|+|++|++++.|.+. .+++++|+|+
T Consensus 58 ~~~~a~~~~~~--~~~v~l~~H~D~vp~~~~~~~~~~~g~~~g~G~~D~K~~~a~~l~a~~~l~~~----~~~~~~v~~~ 131 (369)
T 3tx8_A 58 NNVLARTNRGL--ASRVMLAGHIDTVPIADNLPSRVEDGIMYGCGTVDMKSGLAVYLHTFATLATS----TELKHDLTLI 131 (369)
T ss_dssp TEEEEECCCCC--SCEEEEEEECCBSCCCSCCSCEECSSEEESSSTTTTHHHHHHHHHHHHHHTSC----TTCCSEEEEE
T ss_pred CcEEEEecCCC--CCeEEEEcccCccCCCCCCCCeEECCEEEcCCcccchHHHHHHHHHHHHHHhh----cCCCccEEEE
Confidence 58999998763 57899999999875 38889999999999999988641 2678999999
Q ss_pred EeCCccCCC--CChHHHHHHHH
Q 005260 389 NWDAEEYGL--IGSTEWVEENR 408 (705)
Q Consensus 389 ~~~~EE~Gl--~GS~~~~~~~~ 408 (705)
+..+||.|. .|+..+++++.
T Consensus 132 ~~~~EE~g~~~~G~~~~~~~~~ 153 (369)
T 3tx8_A 132 AYECEEVADHLNGLGHIRDEHP 153 (369)
T ss_dssp EECCCSSCTTSCHHHHHHHHCG
T ss_pred EEeccccCcccccHHHHHHhcc
Confidence 999999987 79988888763
No 41
>3ife_A Peptidase T; metallopeptidase, aminopeptidase, hydro metal-binding, metalloprotease, protease; HET: SUC; 1.55A {Bacillus anthracis}
Probab=97.85 E-value=1e-05 Score=89.39 Aligned_cols=77 Identities=18% Similarity=0.175 Sum_probs=63.2
Q ss_pred eeeEEEEecCCCC-CCcEEEEeeccCCcCC---------------C----------------------------------
Q 005260 324 IQNVIGIIPGTEE-PDRLVILGNHRDAWTF---------------G---------------------------------- 353 (705)
Q Consensus 324 ~~NVia~i~G~~~-p~~~ViigaH~Ds~~~---------------G---------------------------------- 353 (705)
..||+|+++|... ..+.|++.+|+|+++. |
T Consensus 80 ~~nv~a~~~g~~~~~~~~v~l~~H~DtVp~~~~~~~~p~~~~~~dg~~i~l~~~~~~~~~~~~~~~~~~~~g~~~i~grG 159 (434)
T 3ife_A 80 NGYVMATLPANTDKDVPVIGFLAHLDTATDFTGKNVKPQIHENFDGNAITLNEELNIVLTPEQFPELPSYKGHTIITTDG 159 (434)
T ss_dssp TSCEEEEECCBSSSCCCCEEEEEECCBCTTSCCSSCCCEEETTCCSSCEEEETTTTEEECTTTCTTGGGGTTSCEEECCS
T ss_pred CcEEEEEeCCCCCCCCCeEEEEEEcccCCCCCCCCCccEEeecCCCCceecccccccccChhhChhHHhhcCCcEEECCC
Confidence 5799999998752 2478999999999842 1
Q ss_pred ----CCCChhHHHHHHHHHHHHHHhHHcCCCCCCcEEEEEeCCccCCCCChHHHH
Q 005260 354 ----AVDPNSGTAALLEVAQRLNKLQKRGWKPRRTIVLCNWDAEEYGLIGSTEWV 404 (705)
Q Consensus 354 ----A~DnaSG~A~lLElAr~l~~l~~~g~~p~rtI~Fv~~~~EE~Gl~GS~~~~ 404 (705)
+.|+.+|+|++|++++.|.+. +.+|+++|+|+++.+||.| .|+..+.
T Consensus 160 ~t~~~~D~K~gva~~l~a~~~L~~~---~~~~~~~i~~if~~~EE~g-~Ga~~~~ 210 (434)
T 3ife_A 160 TTLLGADDKAGLTEIMVAMNYLIHN---PQIKHGKIRVAFTPDEEIG-RGPAHFD 210 (434)
T ss_dssp SSCCCHHHHHHHHHHHHHHHHHHTC---TTSCBCCEEEEEESCGGGT-CTGGGCC
T ss_pred ccchhhhhHHHHHHHHHHHHHHHhC---CCCCCCCEEEEEECCcccC-hHHHHhh
Confidence 367789999999999988653 4478899999999999999 8987754
No 42
>3rza_A Tripeptidase; phosphorylase/hydrolase-like, structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; HET: CIT PG4 PGE; 2.10A {Staphylococcus aureus subsp}
Probab=97.81 E-value=1.3e-05 Score=87.29 Aligned_cols=78 Identities=31% Similarity=0.357 Sum_probs=63.3
Q ss_pred eeeEEEEecCC--CCCCcEEEEeeccCCcCC-----------------CC----CCChhHHHHHHHHHHHHHHhHHcCCC
Q 005260 324 IQNVIGIIPGT--EEPDRLVILGNHRDAWTF-----------------GA----VDPNSGTAALLEVAQRLNKLQKRGWK 380 (705)
Q Consensus 324 ~~NVia~i~G~--~~p~~~ViigaH~Ds~~~-----------------GA----~DnaSG~A~lLElAr~l~~l~~~g~~ 380 (705)
..||+|+++|. ..+.+.|++.+|+|+.+. |+ .|+.+|++++|++++.|.+. + .
T Consensus 74 ~~nvia~~~g~~~~~~~~~i~l~aH~D~vp~g~~~~p~~~~~g~~~g~G~~~~g~D~k~g~a~~l~a~~~l~~~---~-~ 149 (396)
T 3rza_A 74 ANNLVCTMNSTIEEGEVPKLYLTSHMDTVVPAINVKPIVKDDGYIYSDGTTILGADDKAGLAAMLEVLQVIKEQ---Q-I 149 (396)
T ss_dssp SCCEEEEECCCCC---CCCEEEEEECCBCSSCSSCCCEECTTSEEECCSSSCCCHHHHHHHHHHHHHHHHHHHH---T-C
T ss_pred CceEEEEECCcCCCCCCCeEEEEEECCccCCCCCcceEEecCCEEECCCccccCcccHHHHHHHHHHHHHHHhc---C-C
Confidence 47999999986 234678999999999841 55 38889999999999998764 3 3
Q ss_pred CCCcEEEEEeCCccCCCCChHHHHH
Q 005260 381 PRRTIVLCNWDAEEYGLIGSTEWVE 405 (705)
Q Consensus 381 p~rtI~Fv~~~~EE~Gl~GS~~~~~ 405 (705)
|+++|+|+++.+||.|..|+..+.+
T Consensus 150 ~~~~v~~~~~~~EE~g~~Ga~~~~~ 174 (396)
T 3rza_A 150 PHGQIQFVITVGEESGLIGAKELNS 174 (396)
T ss_dssp CCCCEEEEEESCGGGTSHHHHHCCG
T ss_pred CCCCEEEEEEcccccccHhHhhhch
Confidence 6789999999999999999987654
No 43
>3pfe_A Succinyl-diaminopimelate desuccinylase; metal binding, merops M20 familiy, phosphorylase/hydrolase-L structural genomics; HET: MSE; 1.50A {Legionella pneumophila subsp}
Probab=97.78 E-value=6.4e-05 Score=83.91 Aligned_cols=92 Identities=24% Similarity=0.291 Sum_probs=72.5
Q ss_pred eeeEEEEecCCCCCCcEEEEeeccCC------cC-----------------CCCCCChhHHHHHHHHHHHHHHhHHcCCC
Q 005260 324 IQNVIGIIPGTEEPDRLVILGNHRDA------WT-----------------FGAVDPNSGTAALLEVAQRLNKLQKRGWK 380 (705)
Q Consensus 324 ~~NVia~i~G~~~p~~~ViigaH~Ds------~~-----------------~GA~DnaSG~A~lLElAr~l~~l~~~g~~ 380 (705)
..||+|+++|. +.+.|++.+|+|+ |. .|+.|+-.|+|++|.+++.|.+. +.+
T Consensus 77 ~~~v~a~~~g~--~~~~i~l~~H~D~vp~~~~w~~~~~Pf~~~~~~g~~~grG~~D~K~~~a~~l~a~~~l~~~---~~~ 151 (472)
T 3pfe_A 77 TPLLFMEIPGQ--IDDTVLLYGHLDKQPEMSGWSDDLHPWKPVLKNGLLYGRGGADDGYSAYASLTAIRALEQQ---GLP 151 (472)
T ss_dssp CCEEEEEECCS--EEEEEEEEEECCBCCCCSCCCTTCBTTBCEEETTEEESTTCCCCCHHHHHHHHHHHHHHHT---TCC
T ss_pred CcEEEEEEcCC--CCCeEEEEccccCCCCcCCCCcCCCCCceEEECCEEEEeCcccCcHHHHHHHHHHHHHHHc---CCC
Confidence 46999999983 3678999999994 32 18899999999999999998754 445
Q ss_pred CCCcEEEEEeCCccCCCCChHHHHHHHHHhhhccEEEEEEcc
Q 005260 381 PRRTIVLCNWDAEEYGLIGSTEWVEENREMLASRAVAYLNID 422 (705)
Q Consensus 381 p~rtI~Fv~~~~EE~Gl~GS~~~~~~~~~~l~~~~va~iNlD 422 (705)
+. +|+|++..+||.|..|+..+++++...+ +++-+.+.+|
T Consensus 152 ~~-~v~~~~~~~EE~g~~g~~~~~~~~~~~~-~~~d~~~~~~ 191 (472)
T 3pfe_A 152 YP-RCILIIEACEESGSYDLPFYIELLKERI-GKPSLVICLD 191 (472)
T ss_dssp CE-EEEEEEESCGGGTSTTHHHHHHHHHHHH-CCCSEEEEEC
T ss_pred CC-cEEEEEEeCCCCCChhHHHHHHHhHhhc-cCCCEEEEeC
Confidence 56 9999999999999999999998875443 2344455555
No 44
>1vgy_A Succinyl-diaminopimelate desuccinylase; structural genomics, unknown function; HET: MSE; 1.90A {Neisseria meningitidis} SCOP: c.56.5.4 d.58.19.1
Probab=97.75 E-value=0.00016 Score=78.51 Aligned_cols=79 Identities=24% Similarity=0.236 Sum_probs=64.6
Q ss_pred eeeEEEEecCCCCCCcEEEEeeccCCcCC-----------------------CCCCChhHHHHHHHHHHHHHHhHHcCCC
Q 005260 324 IQNVIGIIPGTEEPDRLVILGNHRDAWTF-----------------------GAVDPNSGTAALLEVAQRLNKLQKRGWK 380 (705)
Q Consensus 324 ~~NVia~i~G~~~p~~~ViigaH~Ds~~~-----------------------GA~DnaSG~A~lLElAr~l~~l~~~g~~ 380 (705)
..||+|++ |.. .+.|++.+|+|+++. |+.|+.+|++++|++++.|.+. +.+
T Consensus 51 ~~nv~a~~-g~~--~~~i~l~~H~D~Vp~~~~~~w~~~Pf~~~~~~g~l~grG~~D~k~~~aa~l~a~~~l~~~---~~~ 124 (393)
T 1vgy_A 51 TKNIWLRR-GTK--APVVCFAGHTDVVPTGPVEKWDSPPFEPAERDGRLYGRGAADMKTSIACFVTACERFVAK---HPN 124 (393)
T ss_dssp BCEEEEEE-CSS--SSEEEEEEECCBCCCCCGGGSSSCTTSCEEETTEEESTTTTTTHHHHHHHHHHHHHHHHH---CTT
T ss_pred CcEEEEEE-CCC--CCEEEEEcccCCcCCCCcccCCCCCCceEEECCEEEecCcccchHHHHHHHHHHHHHHHh---cCC
Confidence 57999999 753 578999999998642 6679999999999999987653 447
Q ss_pred CCCcEEEEEeCCccCC-CCChHHHHHHHH
Q 005260 381 PRRTIVLCNWDAEEYG-LIGSTEWVEENR 408 (705)
Q Consensus 381 p~rtI~Fv~~~~EE~G-l~GS~~~~~~~~ 408 (705)
++++|+|+++.+||.| +.|+...++...
T Consensus 125 ~~~~v~~~~~~~EE~~~~~Ga~~~~~~~~ 153 (393)
T 1vgy_A 125 HQGSIALLITSDEEGDALDGTTKVVDVLK 153 (393)
T ss_dssp CSSEEEEEEESCSSSCCTTSHHHHHHHHH
T ss_pred CCCcEEEEEEeccccCCcCCHHHHHHHHH
Confidence 8899999999999984 789998776543
No 45
>1xmb_A IAA-amino acid hydrolase homolog 2; structural genomics, protein structure initiative, CESG AT5G56660, ILL2, indole-3-acetic acid, auxin; 2.00A {Arabidopsis thaliana} SCOP: c.56.5.4 d.58.19.1 PDB: 2q43_A
Probab=97.68 E-value=0.00012 Score=80.24 Aligned_cols=78 Identities=33% Similarity=0.372 Sum_probs=62.4
Q ss_pred eeeEEEEecCCCCCCcEEEEeeccCCcCCCC---------CCC----h---hHHHHHHHHHHHHHHhHHcCCCCCCcEEE
Q 005260 324 IQNVIGIIPGTEEPDRLVILGNHRDAWTFGA---------VDP----N---SGTAALLEVAQRLNKLQKRGWKPRRTIVL 387 (705)
Q Consensus 324 ~~NVia~i~G~~~p~~~ViigaH~Ds~~~GA---------~Dn----a---SG~A~lLElAr~l~~l~~~g~~p~rtI~F 387 (705)
..||+|+++|.. + +.|++.+|+|+.+.|- .|+ . .|+|++|++++.|.+. +.+++++|+|
T Consensus 71 ~~~l~a~~~~~~-~-~~i~l~aH~D~vp~~~~~~~pf~~~~~g~~~g~G~d~~~a~~l~a~~~l~~~---~~~~~~~v~~ 145 (418)
T 1xmb_A 71 ITGVIGYIGTGE-P-PFVALRADMDALPIQEGVEWEHKSKIAGKMHACGHDGHVTMLLGAAKILHEH---RHHLQGTVVL 145 (418)
T ss_dssp TTEEEEEEESSS-S-CEEEEEEECCCBSCCCCCCSTTCCSSTTCBCCSSHHHHHHHHHHHHHHHHHT---GGGCSSEEEE
T ss_pred CcEEEEEEcCCC-C-CEEEEEecccccCCCCCCCCCcccCCCCceEeCCchHHHHHHHHHHHHHHhc---cccCCceEEE
Confidence 479999998864 3 7899999999986321 011 1 7999999999998764 2367899999
Q ss_pred EEeCCccCCCCChHHHHHHH
Q 005260 388 CNWDAEEYGLIGSTEWVEEN 407 (705)
Q Consensus 388 v~~~~EE~Gl~GS~~~~~~~ 407 (705)
++..+|| |..|+..++++.
T Consensus 146 ~~~~~EE-g~~G~~~~~~~g 164 (418)
T 1xmb_A 146 IFQPAEE-GLSGAKKMREEG 164 (418)
T ss_dssp EEECCTT-TTCHHHHHHHTT
T ss_pred EEecccc-ccccHHHHHHcC
Confidence 9999999 999999988764
No 46
>3khx_A Putative dipeptidase sacol1801; DAPE, metallopeptidase, hydrolase, metal-bindin metalloprotease, protease; 2.30A {Staphylococcus aureus} PDB: 3ki9_A 3khz_A
Probab=97.67 E-value=7.6e-05 Score=83.77 Aligned_cols=79 Identities=16% Similarity=0.162 Sum_probs=65.3
Q ss_pred eeEEEEec-CCCCCCcEEEEeeccCCcC---------------------CCCCCChhHHHHHHHHHHHHHHhHHcCCCCC
Q 005260 325 QNVIGIIP-GTEEPDRLVILGNHRDAWT---------------------FGAVDPNSGTAALLEVAQRLNKLQKRGWKPR 382 (705)
Q Consensus 325 ~NVia~i~-G~~~p~~~ViigaH~Ds~~---------------------~GA~DnaSG~A~lLElAr~l~~l~~~g~~p~ 382 (705)
.|+++.++ |.. .+.|++.+|+|+++ .|+.|+.+|++++|.+++.|.+ .+.+++
T Consensus 87 ~~~~~~~~~g~~--~~~i~l~~H~D~vp~~~~w~~~Pf~~~~~~g~l~GrG~~D~Kg~~a~~l~a~~~l~~---~~~~~~ 161 (492)
T 3khx_A 87 DHIAGRIEAGKG--NDVLGILCHVDVVPAGDGWDSNPFEPVVTEDAIIARGTLDDKGPTIAAYYAIKILED---MNVDWK 161 (492)
T ss_dssp TTTEEEEEEECS--SCEEEEEEECCCCCCCSCCSSCTTSCEECSSEEESTTTTTTHHHHHHHHHHHHHHHH---TTCCCS
T ss_pred CCEEEEEEeCCC--CCEEEEEEeccCCCCCCCcccCCCceEEECCEEEecCCccCcHHHHHHHHHHHHHHH---cCCCCC
Confidence 36777765 432 57899999999742 1899999999999999998865 355788
Q ss_pred CcEEEEEeCCccCCCCChHHHHHHHH
Q 005260 383 RTIVLCNWDAEEYGLIGSTEWVEENR 408 (705)
Q Consensus 383 rtI~Fv~~~~EE~Gl~GS~~~~~~~~ 408 (705)
++|+|++..+||.|..|+.+|++++.
T Consensus 162 ~~i~~~~~~~EE~g~~g~~~~~~~~~ 187 (492)
T 3khx_A 162 KRIHMIIGTDEESDWKCTDRYFKTEE 187 (492)
T ss_dssp SEEEEEEECCTTCCCCTTSHHHHHSC
T ss_pred CCEEEEEECCccCCCcCHHHHHHhCc
Confidence 99999999999999999999998763
No 47
>1lfw_A PEPV; hydrolase, dipeptidase; HET: AEP; 1.80A {Bacteria} SCOP: c.56.5.4 d.58.19.1
Probab=97.61 E-value=0.00015 Score=80.75 Aligned_cols=77 Identities=18% Similarity=0.195 Sum_probs=63.2
Q ss_pred eeEEEEecCCCCCCcEEEEeeccCCcC----------------------CCCCCChhHHHHHHHHHHHHHHhHHcCCCCC
Q 005260 325 QNVIGIIPGTEEPDRLVILGNHRDAWT----------------------FGAVDPNSGTAALLEVAQRLNKLQKRGWKPR 382 (705)
Q Consensus 325 ~NVia~i~G~~~p~~~ViigaH~Ds~~----------------------~GA~DnaSG~A~lLElAr~l~~l~~~g~~p~ 382 (705)
.++++.+ |.. .+.|++.+|+|+++ .|+.|+..|++++|++++.|.+. +.+++
T Consensus 69 ~~~~~~~-g~~--~~~i~l~~H~D~vp~~~~w~~~Pf~~~~~~~g~l~grG~~D~K~~~a~~l~a~~~l~~~---~~~~~ 142 (470)
T 1lfw_A 69 YAGRVNF-GAG--DKRLGIIGHMDVVPAGEGWTRDPFKMEIDEEGRIYGRGSADDKGPSLTAYYGMLLLKEA---GFKPK 142 (470)
T ss_dssp TEEEEEE-CCC--SSEEEEEEECCBCCCCSCCSSCTTSCEECTTCEEESTTSSSSHHHHHHHHHHHHHHHHH---TCCCS
T ss_pred eEEEEEe-CCC--CCeEEEEEeecccCCCCCccCCCcceeEeeCCEEECCCcccChHHHHHHHHHHHHHHHc---CCCCC
Confidence 4567777 643 57899999999742 17789999999999999988753 45788
Q ss_pred CcEEEEEeCCccCCCCChHHHHHHH
Q 005260 383 RTIVLCNWDAEEYGLIGSTEWVEEN 407 (705)
Q Consensus 383 rtI~Fv~~~~EE~Gl~GS~~~~~~~ 407 (705)
++|+|+++.+||.|..|+..++++.
T Consensus 143 ~~i~~i~~~~EE~g~~G~~~~~~~~ 167 (470)
T 1lfw_A 143 KKIDFVLGTNEETNWVGIDYYLKHE 167 (470)
T ss_dssp SEEEEEEESCTTTTCHHHHHHHHHS
T ss_pred CCEEEEEecCcccCCccHHHHHHhC
Confidence 9999999999999999999988764
No 48
>1fno_A Peptidase T; metallo peptidase, protease, hydrolase; 2.40A {Salmonella typhimurium} SCOP: c.56.5.4 d.58.19.1 PDB: 1vix_A
Probab=97.58 E-value=6.3e-05 Score=82.42 Aligned_cols=77 Identities=18% Similarity=0.181 Sum_probs=61.2
Q ss_pred eeeEEEEecCCCC-CCcEEEEeeccCCcCCC-------------------------------------------------
Q 005260 324 IQNVIGIIPGTEE-PDRLVILGNHRDAWTFG------------------------------------------------- 353 (705)
Q Consensus 324 ~~NVia~i~G~~~-p~~~ViigaH~Ds~~~G------------------------------------------------- 353 (705)
..||+|+++|... +.+.|++.+|+|+++.+
T Consensus 55 ~~nvia~~~g~~~~~~~~i~l~aH~D~Vp~~~~~~~~p~~~~~~~g~~i~~~~g~~~~~~~~~~~~~~~~gd~~l~grGa 134 (417)
T 1fno_A 55 KGTLMATLPANVEGDIPAIGFISHVDTSPDFSGKNVNPQIVENYRGGDIALGIGDEVLSPVMFPVLHQLLGQTLITTDGK 134 (417)
T ss_dssp TCCEEEEECCSSCSCCCCEEEEEECCBCTTSCCSSCCCEEETTCCSSCEECSSSSCEECTTTCGGGGGCTTSCEEECCSS
T ss_pred CceEEEEECCCCCCCCCceEEEEeccccCCCCCCCCCceEEecCCCCeecccccccccchhhcchhhhhcCCcEEEcCCc
Confidence 4699999988642 25689999999998431
Q ss_pred ---CCCChhHHHHHHHHHHHHHHhHHcCCCCCCcEEEEEeCCccCCCCChHHHHH
Q 005260 354 ---AVDPNSGTAALLEVAQRLNKLQKRGWKPRRTIVLCNWDAEEYGLIGSTEWVE 405 (705)
Q Consensus 354 ---A~DnaSG~A~lLElAr~l~~l~~~g~~p~rtI~Fv~~~~EE~Gl~GS~~~~~ 405 (705)
+.|+..|+|++|++++.|.+ .+ .++++|+|++..+||.| .|+..+++
T Consensus 135 t~l~~D~K~g~a~~l~a~~~l~~---~~-~~~~~v~~~~~~~EE~g-~Ga~~~~~ 184 (417)
T 1fno_A 135 TLLGADDKAGVAEIMTALAVLKG---NP-IPHGDIKVAFTPDEEVG-KGAKHFDV 184 (417)
T ss_dssp SCCCHHHHHHHHHHHHHHHHHHS---SS-CCCCCEEEEEESCGGGT-CTTTTCCH
T ss_pred cccccccHHhHHHHHHHHHHHHh---CC-CCCCcEEEEEEeccccC-CChhhhch
Confidence 14555899999999998865 34 57899999999999999 89977654
No 49
>3isz_A Succinyl-diaminopimelate desuccinylase; DAPE, Zn-binding, metallopeptidase, structural genomics, PSI-2, protein struc initiative; 2.00A {Haemophilus influenzae} PDB: 3ic1_A
Probab=97.50 E-value=0.00027 Score=75.84 Aligned_cols=79 Identities=25% Similarity=0.232 Sum_probs=63.9
Q ss_pred eeeeEEEEecCCCCCCcEEEEeeccCCcCC-----------------------CCCCChhHHHHHHHHHHHHHHhHHcCC
Q 005260 323 TIQNVIGIIPGTEEPDRLVILGNHRDAWTF-----------------------GAVDPNSGTAALLEVAQRLNKLQKRGW 379 (705)
Q Consensus 323 ~~~NVia~i~G~~~p~~~ViigaH~Ds~~~-----------------------GA~DnaSG~A~lLElAr~l~~l~~~g~ 379 (705)
...||+|++ |. +.+.|++.+|+|+++. |+.|+.+|++++|+.++.|.+. +.
T Consensus 47 ~~~n~~a~~-g~--~~~~i~l~aH~D~vp~~~~~~w~~~pf~~~~~~g~~~g~G~~D~k~g~~~~l~a~~~l~~~---~~ 120 (377)
T 3isz_A 47 DTLNLWAKH-GT--SEPVIAFAGHTDVVPTGDENQWSSPPFSAEIIDGMLYGRGAADMKGSLAAMIVAAEEYVKA---NP 120 (377)
T ss_dssp TBCEEEEEE-ES--SSCEEEEEEECCBCCCCCGGGCSSCTTSCCEETTEEESTTTTTTHHHHHHHHHHHHHHHHH---CT
T ss_pred CCceEEEEe-CC--CCCEEEEeccccccCCCCcccCCCCCCCcEEECCEEEeCChhhhhHHHHHHHHHHHHHHHh---CC
Confidence 357999998 64 3678999999998642 5669999999999998887653 34
Q ss_pred CCCCcEEEEEeCCccCCC-CChHHHHHHH
Q 005260 380 KPRRTIVLCNWDAEEYGL-IGSTEWVEEN 407 (705)
Q Consensus 380 ~p~rtI~Fv~~~~EE~Gl-~GS~~~~~~~ 407 (705)
+++++|+|++..+||.|. .||..+++..
T Consensus 121 ~~~~~v~~~~~~~EE~~~~~G~~~~~~~~ 149 (377)
T 3isz_A 121 NHKGTIALLITSDEEATAKDGTIHVVETL 149 (377)
T ss_dssp TCSSEEEEEEESCSSSCCSSSHHHHHHHH
T ss_pred CCCceEEEEEEcccccCccccHHHHHHHH
Confidence 678999999999999876 6999877654
No 50
>3isx_A Endoglucanase; TM1050, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2, hydrolase; HET: MSE; 1.40A {Thermotoga maritima}
Probab=97.49 E-value=0.00034 Score=74.64 Aligned_cols=127 Identities=23% Similarity=0.249 Sum_probs=82.0
Q ss_pred CCCCChhHHHHHHHHHHHHHHhHHcCCCCCCcEEEEEeCCccCCCCChHHHHHHHHHhhhccEEEEEEccCcccC-----
Q 005260 353 GAVDPNSGTAALLEVAQRLNKLQKRGWKPRRTIVLCNWDAEEYGLIGSTEWVEENREMLASRAVAYLNIDSAVHE----- 427 (705)
Q Consensus 353 GA~DnaSG~A~lLElAr~l~~l~~~g~~p~rtI~Fv~~~~EE~Gl~GS~~~~~~~~~~l~~~~va~iNlD~~g~g----- 427 (705)
.+-||-.|++++||+++.+ ++..++.|++..-||.|+.|++.-.... ..++ +|.+|+...+
T Consensus 177 ~~lDdR~g~~~~l~~l~~l--------~~~~~~~~~ft~qEEVG~~Ga~~aa~~i----~pd~--~i~vDv~~a~d~p~~ 242 (343)
T 3isx_A 177 KAMDDRIGCAVIVEVFKRI--------KPAVTLYGVFSVQEEVGLVGASVAGYGV----PADE--AIAIDVTDSADTPKA 242 (343)
T ss_dssp SCHHHHHHHHHHHHHHHHC--------CCSSEEEEEEECCCCTTSCCSTTTGGGC----CCSE--EEEEEEEECCCSTTC
T ss_pred ccCccHHHHHHHHHHHHhc--------cCCCeEEEEEECCcccCchhHHHHhhcC----CCCE--EEEEeCcCCCCCCCc
Confidence 7889999999999988764 2368999999999999999986422221 2232 5667764221
Q ss_pred -----------Ccccc-----ccChhHHHHHHHHHHHcCCCCCCccchhhccccCCCCCcccc-CCCCCCchHHHHh-cC
Q 005260 428 -----------AGFHA-----SATPQLDELLKQAAKQVQDPDNSSQTIYDSWTGSSNSPVIGR-LGGGGSDYAAFIQ-HI 489 (705)
Q Consensus 428 -----------~~l~~-----~~sp~l~~l~~~~~~~v~~p~~~~~~l~~~~~~~~~~~~~~~-~g~~~SD~~~F~~-~~ 489 (705)
+.+.. ..+|.+.+.+.+++++..-|.. ... .+ +|||-.++.. ..
T Consensus 243 ~~~~~~~lg~GpvI~~~d~~~~~d~~l~~~l~~~A~~~gIp~Q-----------------~~v~~g-gGTDa~~i~~a~~ 304 (343)
T 3isx_A 243 IKRHAMRLSGGPALKVKDRASISSKRILENLIEIAEKFDIKYQ-----------------MEVLTF-GGTNAMGYQRTRE 304 (343)
T ss_dssp CCTTCCCTTSCCEEECBTTCCHHHHHHHHHHHHHHHHTTCCCE-----------------ECCCBC-CCSSHHHHHHHTS
T ss_pred ccccccccCCCcEEEEcCCCCCCCHHHHHHHHHHHHHCCCCeE-----------------EecCCC-CchHHHHHHHhcC
Confidence 11111 1235667777777776433311 111 23 7899887753 36
Q ss_pred CceEEEeeeCCCCCCCCCCccchH
Q 005260 490 GVPVADMSFGTGYPVYHSMYDDFI 513 (705)
Q Consensus 490 GIPs~~l~~~~~~p~yHt~~Dt~~ 513 (705)
|||+++++.... +.||++....
T Consensus 305 Gipt~~Igvp~r--~~Hs~~E~~~ 326 (343)
T 3isx_A 305 GIPSATVSIPTR--YVHSPSEMIA 326 (343)
T ss_dssp SCCEEEEEEEEB--STTSTTEEEC
T ss_pred CCCEEEEccccc--cccchhhEec
Confidence 999999976422 4788876654
No 51
>1ysj_A Protein YXEP; M20 family peptidase, dinuclear metal binding, structural GE PSI, protein structure initiative; 2.40A {Bacillus subtilis} SCOP: c.56.5.4 d.58.19.1
Probab=97.47 E-value=0.00021 Score=77.97 Aligned_cols=78 Identities=26% Similarity=0.256 Sum_probs=61.7
Q ss_pred eeeEEEEecCCCCCCcEEEEeeccCCcCCCC---------CCC-------hhHHHHHHHHHHHHHHhHHcCCCCCCcEEE
Q 005260 324 IQNVIGIIPGTEEPDRLVILGNHRDAWTFGA---------VDP-------NSGTAALLEVAQRLNKLQKRGWKPRRTIVL 387 (705)
Q Consensus 324 ~~NVia~i~G~~~p~~~ViigaH~Ds~~~GA---------~Dn-------aSG~A~lLElAr~l~~l~~~g~~p~rtI~F 387 (705)
-.||+|+++|.. +.+.|++.+|+|+++.|- .|+ -.|+|++|++++.|.+. +.+++++|+|
T Consensus 76 ~~nv~a~~~g~~-~~~~i~l~~H~D~vp~~~~~~~Pf~~~~~g~l~g~G~kg~~a~~l~a~~~l~~~---~~~~~~~v~~ 151 (404)
T 1ysj_A 76 KTGVIAEIKGRE-DGPVIAIRADIDALPIQEQTNLPFASKVDGTMHACGHDFHTASIIGTAMLLNQR---RAELKGTVRF 151 (404)
T ss_dssp SSCEEEEEECSS-CCCEEEEEEECCCBSCCCCCCCTTCCSSTTCBCTTSHHHHHHHHHHHHHHHHTC---GGGCSSEEEE
T ss_pred CceEEEEEeCCC-CCCEEEEEEecccccCCCCCCCCcccCCCCceEcCcChHHHHHHHHHHHHHHhc---cccCCceEEE
Confidence 359999999864 357899999999986431 111 17999999999988764 2367899999
Q ss_pred EEeCCccCCCCChHHHHHH
Q 005260 388 CNWDAEEYGLIGSTEWVEE 406 (705)
Q Consensus 388 v~~~~EE~Gl~GS~~~~~~ 406 (705)
++..+||. ..|+..++++
T Consensus 152 ~~~~~EE~-~~G~~~~~~~ 169 (404)
T 1ysj_A 152 IFQPAEEI-AAGARKVLEA 169 (404)
T ss_dssp EEESCTTT-TCHHHHHHHT
T ss_pred EEeccccc-chhHHHHHhc
Confidence 99999998 7899988875
No 52
>2f7v_A Aectylcitrulline deacetylase; alpha/beta, hydrolase; 1.75A {Xanthomonas campestris} PDB: 2f8h_A
Probab=97.35 E-value=0.00022 Score=76.78 Aligned_cols=69 Identities=17% Similarity=0.183 Sum_probs=58.3
Q ss_pred eeeEEEEecCCCCCCcEEEEeeccCCcC---------------------CCCCCChhHHHHHHHHHHHHHHhHHcCCCCC
Q 005260 324 IQNVIGIIPGTEEPDRLVILGNHRDAWT---------------------FGAVDPNSGTAALLEVAQRLNKLQKRGWKPR 382 (705)
Q Consensus 324 ~~NVia~i~G~~~p~~~ViigaH~Ds~~---------------------~GA~DnaSG~A~lLElAr~l~~l~~~g~~p~ 382 (705)
..||+| ++|. +.|++.+|+|+++ .|+.|+..|++++|++++. ++
T Consensus 58 ~~~~~a-~~g~----~~i~l~~H~D~vp~~~~w~~~pf~~~~~~g~l~grG~~D~k~g~a~~l~a~~~----------~~ 122 (369)
T 2f7v_A 58 AVSLYA-VRGT----PKYLFNVHLDTVPDSPHWSADPHVMRRTEDRVIGLGVCDIKGAAAALVAAANA----------GD 122 (369)
T ss_dssp CEEEEE-EESC----CSEEEEEECCBCCCCSSCSSCTTSCEECSSEEECTTTTTTHHHHHHHHHHHTT----------CC
T ss_pred ceEEEE-EcCC----CeEEEEeeecccCCCCCCCCCCCCcEEECCEEEecccccccHHHHHHHHHHhc----------CC
Confidence 379999 9885 4599999999642 1788999999999998764 57
Q ss_pred CcEEEEEeCCccC-CCCChHHHHHHH
Q 005260 383 RTIVLCNWDAEEY-GLIGSTEWVEEN 407 (705)
Q Consensus 383 rtI~Fv~~~~EE~-Gl~GS~~~~~~~ 407 (705)
++|+|+++.+||. |..|+..++++.
T Consensus 123 ~~v~~~~~~~EE~~g~~G~~~~~~~~ 148 (369)
T 2f7v_A 123 GDAAFLFSSDEEANDPRCIAAFLARG 148 (369)
T ss_dssp CCEEEEEESCTTSSSCCHHHHHHTTC
T ss_pred CCEEEEEEeCcccCCCcCHHHHHhcC
Confidence 8999999999999 899999988764
No 53
>3mru_A Aminoacyl-histidine dipeptidase; metalloprotease, homodimer, hydrolase; 3.00A {Vibrio alginolyticus}
Probab=97.31 E-value=0.00013 Score=81.74 Aligned_cols=89 Identities=28% Similarity=0.216 Sum_probs=67.1
Q ss_pred eeeEEEEecCCC--CCCcEEEEeeccCCcCC--------------------------CCC---CChhHHHHHHHHHHHHH
Q 005260 324 IQNVIGIIPGTE--EPDRLVILGNHRDAWTF--------------------------GAV---DPNSGTAALLEVAQRLN 372 (705)
Q Consensus 324 ~~NVia~i~G~~--~p~~~ViigaH~Ds~~~--------------------------GA~---DnaSG~A~lLElAr~l~ 372 (705)
..||+|+++|+. ++.+.|++.+|+|+++. |+. |+..|+|++|++++
T Consensus 56 ~~nv~a~~~g~~g~~~~~~v~l~aH~D~vp~~~~~~~~~w~~~p~~~~~~~g~l~g~G~~lgaD~k~g~a~~l~~l~--- 132 (490)
T 3mru_A 56 TGNVFIKKPATPGMENKKGVVLQAHIDMVPQKNEDTDHDFTQDPIQPYIDGEWVTAKGTTLGADNGIGMASCLAVLA--- 132 (490)
T ss_dssp TCCEEEEECCCTTCTTCCCEEEEEECCBCCCBCTTSCCCTTTCCCCEEEETTEEEETTBCCCHHHHTTHHHHHHHHH---
T ss_pred CCeEEEEEcCCCCCCCCCeEEEEeccCCCCCCCCCcccccccCCceEEeeCCeEecCCCccCCCCHHHHHHHHHHHH---
Confidence 469999999752 24678999999998642 554 89999999998652
Q ss_pred HhHHcCCCCCCcEEEEEeCCccCCCCChHHHHHHHHHhhhccEEEEEEccCc
Q 005260 373 KLQKRGWKPRRTIVLCNWDAEEYGLIGSTEWVEENREMLASRAVAYLNIDSA 424 (705)
Q Consensus 373 ~l~~~g~~p~rtI~Fv~~~~EE~Gl~GS~~~~~~~~~~l~~~~va~iNlD~~ 424 (705)
....+..+|+|++..+||.|+.|+..++++. + +....+|+|..
T Consensus 133 ----~~~~~~~~v~~~~~~~EE~g~~Ga~~~~~~~---~--~~~~~~~~d~~ 175 (490)
T 3mru_A 133 ----SKEIKHGPIEVLLTIDEEAGMTGAFGLEAGW---L--KGDILLNTDSE 175 (490)
T ss_dssp ----CSSCCCCSEEEEEESCSSSTTGGGGTCCSSS---C--CSSEEEECCCC
T ss_pred ----hCCCCCCCEEEEEEcccccccHhHHHhhhcc---c--CCCEEEEcCCC
Confidence 2235688999999999999999998876542 2 34456788853
No 54
>3ram_A HMRA protein; two-domain, catalytic (alpha-beta-alpha) motif, tetramerisat (alpha,beta,BETA,alpha), endoprotease, hydrolase; 2.70A {Staphylococcus aureus}
Probab=97.28 E-value=0.00047 Score=74.99 Aligned_cols=78 Identities=15% Similarity=0.019 Sum_probs=59.4
Q ss_pred eeeEEEEecCCCCCCcEEEEeeccCCcCC---CCCCChhHHHHHHHHHHHHHHhHHcCCCCCCcEEEEEeCCccCC-CCC
Q 005260 324 IQNVIGIIPGTEEPDRLVILGNHRDAWTF---GAVDPNSGTAALLEVAQRLNKLQKRGWKPRRTIVLCNWDAEEYG-LIG 399 (705)
Q Consensus 324 ~~NVia~i~G~~~p~~~ViigaH~Ds~~~---GA~DnaSG~A~lLElAr~l~~l~~~g~~p~rtI~Fv~~~~EE~G-l~G 399 (705)
-.||+|+++|.. +.+.|++.+|+|+++. +-..+.- .+++|.+|+.|.+... +++++|+|+++.+||.| ..|
T Consensus 61 ~~~via~~~g~~-~g~~i~l~ah~D~vpg~~ha~G~d~~-~a~~l~aa~~L~~~~~---~~~g~v~~~f~~~EE~~~~~G 135 (394)
T 3ram_A 61 ATGFIATYDSGL-DGPAIGFLAEYDALPGLGHACGHNII-GTASVLGAIGLKQVID---QIGGKVVVLGCPAEEGGENGS 135 (394)
T ss_dssp EEEEEEEEECSS-SSCEEEEEECCCCCTTTSSTTCHHHH-HHHHHHHHHHHHTTHH---HHCSEEEEEECCCTTCCTTCC
T ss_pred ceEEEEEEeCCC-CCCEEEEEEecccCCCcceECCccHH-HHHHHHHHHHHHHhHh---hCCceEEEEEECCccCCCCCc
Confidence 359999999864 3689999999999972 1222333 4678888888876532 57899999999999998 589
Q ss_pred hH-HHHHH
Q 005260 400 ST-EWVEE 406 (705)
Q Consensus 400 S~-~~~~~ 406 (705)
+. ..+++
T Consensus 136 a~~~~~~~ 143 (394)
T 3ram_A 136 AKASYVKA 143 (394)
T ss_dssp HHHHHHHH
T ss_pred hHHHHHHc
Confidence 99 66664
No 55
>2qyv_A XAA-His dipeptidase; YP_718209.1, structural genomi center for structural genomics, JCSG, protein structure INI PSI-2, hydrolase; 2.11A {Haemophilus somnus 129PT}
Probab=97.18 E-value=0.00013 Score=81.59 Aligned_cols=76 Identities=25% Similarity=0.259 Sum_probs=60.5
Q ss_pred eeeEEEEecCCC--CCCcEEEEeeccCCcCC--------------------------CCC---CChhHHHHHHHHHHHHH
Q 005260 324 IQNVIGIIPGTE--EPDRLVILGNHRDAWTF--------------------------GAV---DPNSGTAALLEVAQRLN 372 (705)
Q Consensus 324 ~~NVia~i~G~~--~p~~~ViigaH~Ds~~~--------------------------GA~---DnaSG~A~lLElAr~l~ 372 (705)
..||+|+++|.. ++.+.|++.+|+|+.+. |+. |+..|+|++|++++.
T Consensus 53 ~~nv~a~~~g~~g~~~~~~i~l~aH~D~vp~~~~~~~~~w~~~p~~~~~~dg~l~g~G~~lgaD~k~g~a~~l~a~~~-- 130 (487)
T 2qyv_A 53 VGNVLIRKPATVGMENRKPVVLQAHLDMVPQANEGTNHNFDQDPILPYIDGDWVKAKGTTLGADNGIGMASALAVLES-- 130 (487)
T ss_dssp TCCEEEEECCCTTCTTBCCEEEEEESCBCCC----------CCCCCEEECSSEEEETTBCCCHHHHHHHHHHHHHHHC--
T ss_pred CCcEEEEeCCCCCCCCCCeEEEEccCCccCCCCCCCccccccCCeeEEeeCCEEEeCCCCcCCcCHHHHHHHHHHHHh--
Confidence 369999998752 33578999999998653 444 888999999998862
Q ss_pred HhHHcCCCCCCcEEEEEeCCccCCCCChHHHHHH
Q 005260 373 KLQKRGWKPRRTIVLCNWDAEEYGLIGSTEWVEE 406 (705)
Q Consensus 373 ~l~~~g~~p~rtI~Fv~~~~EE~Gl~GS~~~~~~ 406 (705)
.+ .++++|+|++..+||.|..|+..++++
T Consensus 131 ----~~-~~~~~v~~~~~~~EE~g~~Ga~~~~~~ 159 (487)
T 2qyv_A 131 ----ND-IAHPELEVLLTMTEERGMEGAIGLRPN 159 (487)
T ss_dssp ----SS-SCCSSEEEEEESCTTTTCHHHHTCCSS
T ss_pred ----CC-CCCCCEEEEEEeccccCCHHHHHHHHh
Confidence 23 467899999999999999999887764
No 56
>3io1_A Aminobenzoyl-glutamate utilization protein; peptidase_M20D superfamily, protein structure initiative II, NYSGXRC, structural genomics; 2.50A {Klebsiella pneumoniae subsp}
Probab=97.12 E-value=0.0008 Score=74.37 Aligned_cols=77 Identities=22% Similarity=0.190 Sum_probs=59.4
Q ss_pred eeEEEEecCCCCCCcEEEEeeccCCcCCCCC----------------CC---h----hHHHHHHHHHHHHHHhHHcCCCC
Q 005260 325 QNVIGIIPGTEEPDRLVILGNHRDAWTFGAV----------------DP---N----SGTAALLEVAQRLNKLQKRGWKP 381 (705)
Q Consensus 325 ~NVia~i~G~~~p~~~ViigaH~Ds~~~GA~----------------Dn---a----SG~A~lLElAr~l~~l~~~g~~p 381 (705)
.||+|+++|.. +.+.|++.+|+|+.+.+-. |. + .++|++|.+|+.|.+.. .++
T Consensus 97 ~~vva~~~~~~-~g~~i~l~ah~Davp~~e~~~~~~~Pf~~~~~s~~~G~~h~cGhd~~~a~~l~aa~~L~~~~---~~~ 172 (445)
T 3io1_A 97 AGVVATLDTGR-PGPTLAFRVDMDALDLNEQHDDSHRPHRDHFASCNAGMMHACGHDGHTAIGLGLAHVLKQYA---AQL 172 (445)
T ss_dssp CCEEEEEECSS-CCCEEEEEEECCCCCC-------------------------CTTCTHHHHHHHHHHHHHHTG---GGC
T ss_pred CEEEEEEeCCC-CCCEEEEEEecCCcCCCCCCCCCcCccccccccCCCCceEecCchHHHHHHHHHHHHHHhCc---CcC
Confidence 58999998864 3689999999999763110 00 1 35999999999998753 368
Q ss_pred CCcEEEEEeCCccCCCCChHHHHHH
Q 005260 382 RRTIVLCNWDAEEYGLIGSTEWVEE 406 (705)
Q Consensus 382 ~rtI~Fv~~~~EE~Gl~GS~~~~~~ 406 (705)
+.+|+|++..+|| |..|+...+++
T Consensus 173 ~g~v~l~f~p~EE-~~~Ga~~~i~~ 196 (445)
T 3io1_A 173 NGVIKLIFQPAEE-GTRGARAMVAA 196 (445)
T ss_dssp CSEEEEEEESCTT-TTCHHHHHHHT
T ss_pred CceEEEEEecccc-ccchHHHHHHc
Confidence 8999999999999 66899888775
No 57
>4fuu_A Leucine aminopeptidase; phosphorylase/hydrolase like fold, peptidase family M28, STR genomics, joint center for structural genomics; 1.30A {Bacteroides thetaiotaomicron}
Probab=96.85 E-value=0.0018 Score=68.02 Aligned_cols=51 Identities=10% Similarity=0.085 Sum_probs=47.2
Q ss_pred CCChhHHHHHHHHhhc-CCCCCCCHhhHHHHHHHHHHHHHCCCceeeeEEEE
Q 005260 38 LSDNVSISHHLHTLTR-RPHVAGSEANAEAAAYVLSVFTSCSLESHIASYGV 88 (705)
Q Consensus 38 ~i~~~~i~~~L~~lss-~~r~aGt~g~~~~a~~i~~~~~~~Gl~~~~~~y~v 88 (705)
.++++++.++|+.|++ .||.+||++..++++||.++|+++|+++..+.|..
T Consensus 21 ~f~~~~a~~~l~~l~~fgpR~~gS~~~~~a~~~i~~~l~~~g~~v~~q~~~~ 72 (309)
T 4fuu_A 21 QFDADSAYLYVKNQVDFGPRVPNTKEHVACGNYLAGKLEAFGAKVTNQYADL 72 (309)
T ss_dssp CCCHHHHHHHHHHHHTTCCCCTTSHHHHHHHHHHHHHHHHTTCEEEEEEEEE
T ss_pred ccCHHHHHHHHHHHhCcCCcCCCCHHHHHHHHHHHHHHHHcCCeeEEEeEEe
Confidence 5899999999999998 58999999999999999999999999998877764
No 58
>2wzn_A TET3, 354AA long hypothetical operon protein FRV; protease, hydrolase, thermophilic, SELF-compartmentalising; 1.90A {Pyrococcus horikoshii} PDB: 2pe3_A
Probab=96.14 E-value=0.054 Score=55.67 Aligned_cols=59 Identities=19% Similarity=0.119 Sum_probs=41.2
Q ss_pred CCCchHHHHh-cCCceEEEeeeCCCCCCCCCCccchHHHHhhCCcchHHHHHHHHHHHHHHHHhCCCCCCC
Q 005260 478 GGSDYAAFIQ-HIGVPVADMSFGTGYPVYHSMYDDFIWMEKFGDPTFQRHVAAASMWGLVALQLADEEFLP 547 (705)
Q Consensus 478 ~~SD~~~F~~-~~GIPs~~l~~~~~~p~yHt~~Dt~~~l~~~~dp~~~~~~~~a~~~~~l~~~La~~~~lP 547 (705)
++||-..|.. ..|||++.++-+.. ..||+....+. ......++++..++.+|..-...|
T Consensus 295 ggTDa~~~~~~~~Giptv~~G~g~~--~~Ht~~E~v~i---------~dl~~~~~ll~~~i~~L~~~d~~p 354 (354)
T 2wzn_A 295 TGTDANVMQINKEGVATAVLSIPIR--YMHSQVELADA---------RDVDNTIKLAKALLEELKPMDFTP 354 (354)
T ss_dssp CSSHHHHHHTSTTCCEEEEEEEEEB--STTSTTCEEEH---------HHHHHHHHHHHHHHHHCCCCCCCC
T ss_pred cccHHHHHHHhcCCCCEEEECcccC--CCCcccEEEEH---------HHHHHHHHHHHHHHHhCccccCCC
Confidence 7899876642 36999999876533 36998765532 234567889999999997755544
No 59
>3i6s_A Subtilisin-like protease; PA-domain, FN3-domain, hydrolase; HET: NAG FUC; 2.50A {Solanum lycopersicum} PDB: 3i74_A*
Probab=95.75 E-value=0.013 Score=67.79 Aligned_cols=88 Identities=18% Similarity=0.185 Sum_probs=64.7
Q ss_pred ceEEeEEEec---CCChhchHHHHhcCCcccceEEEEEeCCCcchhHHHHHHHcCCeEEEEEecCCCCCCCCCCCCcCCC
Q 005260 142 TVIGPVVYVN---YGRVEDYVTLKEMVVNVTGTVVLARYGQIFRGDIVHNAFEAGAAGALIFTDRKDYGGGSDDARWFPD 218 (705)
Q Consensus 142 ~v~g~lVyv~---~G~~~D~~~L~~~gv~v~GkIvl~~~g~~~~~~k~~~A~~~GA~gvi~~~dp~~~~~~~~~~~~yP~ 218 (705)
...-+|||.+ .+.... |....+|++|||||++.|.+.+..|..++.++||+|+|++++...
T Consensus 256 ~~~~plv~~~~~~~C~~~~---l~~~~vdl~GkIvlc~~g~~~~~~k~~~~~~~Ga~g~i~~n~~~~------------- 319 (649)
T 3i6s_A 256 VRDSPVIYNKTLSDCSSEE---LLSQVENPENTIVICDDNGDFSDQMRIITRARLKAAIFISEDPGV------------- 319 (649)
T ss_dssp EEEEEEECCTTTTTCCCHH---HHTTSSSGGGCEEEECCCSCHHHHHHHHHHHTCSEEEEECCCGGG-------------
T ss_pred CcceeeEeccccccccccc---ccccccccCCcEEEEeCCCccHHHHHHHHHhcCceEEEEecCccc-------------
Confidence 3456888865 222222 333345569999999999998899999999999999999976410
Q ss_pred CCCCCCCCceeeeeecCCCCCCCCCCCCCCcccccchHHHhhcCCCCCCCcccCCHHHHHHHHHHcCC
Q 005260 219 DKWMPPSGVQVGSVYDGTGDPTTPGWPSSEGCERLSKEEVEKAGNVPLIPSLPISAKDGETIMRSIGG 286 (705)
Q Consensus 219 ~~~~p~~~v~rg~v~~~~Gdp~tPg~ps~~~~~r~~~~~~~~~~~~p~IP~~~is~~~a~~Ll~~l~~ 286 (705)
. . .....||++.|+.+++..|++.+..
T Consensus 320 --------~--------~-------------------------~~~~~~P~~~v~~~~g~~i~~yi~s 346 (649)
T 3i6s_A 320 --------F--------R-------------------------SATFPNPGVVVNKKEGKQVINYVKN 346 (649)
T ss_dssp --------G--------G-------------------------CCCCCSCEEEECHHHHHHHHHHHHT
T ss_pred --------c--------c-------------------------cccCcCCEEEEcHHHHHHHHHHHhc
Confidence 0 0 0123689999999999999998864
No 60
>3tc8_A Leucine aminopeptidase; phosphorylase/hydrolase-like, structural genomics, joint CEN structural genomics, JCSG; 1.06A {Parabacteroides distasonis}
Probab=95.51 E-value=0.021 Score=59.93 Aligned_cols=53 Identities=11% Similarity=-0.003 Sum_probs=47.6
Q ss_pred hhccCCCChhHHHHHHHHhhcC-CCCCCCHhhHHHHHHHHHHHHHCCCceeeeEEE
Q 005260 33 YTSTSLSDNVSISHHLHTLTRR-PHVAGSEANAEAAAYVLSVFTSCSLESHIASYG 87 (705)
Q Consensus 33 ~~~~~~i~~~~i~~~L~~lss~-~r~aGt~g~~~~a~~i~~~~~~~Gl~~~~~~y~ 87 (705)
.+. .++.+++.++|+.|++. +|.+||+++.++++||.++|+++|++++.++|.
T Consensus 18 ~~~--~~~~~~~~~~l~~l~~~~~R~~~s~~~~~~~~~l~~~l~~~G~~v~~~~~~ 71 (309)
T 3tc8_A 18 AVP--DFNADSAYAYVANQVAFGPRVPNTAAHKACGDYLASELKRFGAKVYQQEAI 71 (309)
T ss_dssp CSC--CCCHHHHHHHHHHHHHTCCCCTTSHHHHHHHHHHHHHHHHTTCEEEEEEEE
T ss_pred ccc--ccCHHHHHHHHHHHHccCCCCCCCHHHHHHHHHHHHHHHHCCCeEEEEEee
Confidence 445 69999999999999874 899999999999999999999999998877765
No 61
>3gux_A Putative Zn-dependent exopeptidase; aminopeptidase, phosphorylase/hydrolase-like fold, structura genomics; 1.80A {Bacteroides vulgatus atcc 8482}
Probab=95.48 E-value=0.024 Score=59.62 Aligned_cols=50 Identities=14% Similarity=0.108 Sum_probs=46.2
Q ss_pred CCChhHHHHHHHHhhcC-CCCCCCHhhHHHHHHHHHHHHHCCCceeeeEEE
Q 005260 38 LSDNVSISHHLHTLTRR-PHVAGSEANAEAAAYVLSVFTSCSLESHIASYG 87 (705)
Q Consensus 38 ~i~~~~i~~~L~~lss~-~r~aGt~g~~~~a~~i~~~~~~~Gl~~~~~~y~ 87 (705)
.++.+++.++|+.|++. +|.+||+++.++++||.++|+++|++++.++|.
T Consensus 23 ~~~~~~~~~~l~~L~~~~~R~~gs~~~~~~~~~l~~~l~~~G~~v~~~~~~ 73 (314)
T 3gux_A 23 EFDADSAYQYIQVQADFGPRVPNTQAHKECGEYLAGQLEKFGAKVYNQYAD 73 (314)
T ss_dssp CCCHHHHHHHHHHHHTTCCCCTTSHHHHHHHHHHHHHHHHTTCEEEEEEEE
T ss_pred CCCHHHHHHHHHHHHccCCcCCCCHHHHHHHHHHHHHHHHCCCEEEEEEee
Confidence 68999999999999986 699999999999999999999999998877765
No 62
>1xf1_A C5A peptidase, SCP; hydrolase; HET: CIT; 1.90A {Streptococcus pyogenes} PDB: 3eif_A*
Probab=95.46 E-value=0.023 Score=68.49 Aligned_cols=55 Identities=33% Similarity=0.434 Sum_probs=46.4
Q ss_pred eEEeEEEecCCChhchHHHHhcCCcccceEEEEEeCCCcchhHHHHHHHcCCeEEEEEecC
Q 005260 143 VIGPVVYVNYGRVEDYVTLKEMVVNVTGTVVLARYGQIFRGDIVHNAFEAGAAGALIFTDR 203 (705)
Q Consensus 143 v~g~lVyv~~G~~~D~~~L~~~gv~v~GkIvl~~~g~~~~~~k~~~A~~~GA~gvi~~~dp 203 (705)
..-++||++.|+.++.- .+++||||||++|.+.+..|+.+|.++||+|+|+|+..
T Consensus 260 ~~~~lv~~~~g~~~~~~------~~v~Gkivl~~rg~~~~~~k~~~~~~~Ga~gvi~~n~~ 314 (926)
T 1xf1_A 260 KAYDYAYANRGTKEDDF------KDVKGKIALIERGDIDFKDKIAKAKKAGAVGVLIYDNQ 314 (926)
T ss_dssp CCEEEEECTTSCSTTTT------TTCTTSEEEEECCSSCHHHHHHHHHHTTCSEEEEECSS
T ss_pred ceEEEEECCCCCCccch------hhcCCeEEEEECCCCCHHHHHHHHHhCCCcEEEEEecC
Confidence 35689999988754421 38999999999999999999999999999999999753
No 63
>2glf_A Probable M18-family aminopeptidase 1; putative, NYSGXRC, structural genomics, PS protein structure initiative; 2.80A {Thermotoga maritima}
Probab=95.24 E-value=0.039 Score=60.71 Aligned_cols=138 Identities=18% Similarity=0.159 Sum_probs=84.8
Q ss_pred CCCCChhHHHHHHHHHHHHHHhHHcCCCCCCcEEEEEeCCccCCCCChH----HHHHHHHHh-----------------h
Q 005260 353 GAVDPNSGTAALLEVAQRLNKLQKRGWKPRRTIVLCNWDAEEYGLIGST----EWVEENREM-----------------L 411 (705)
Q Consensus 353 GA~DnaSG~A~lLElAr~l~~l~~~g~~p~rtI~Fv~~~~EE~Gl~GS~----~~~~~~~~~-----------------l 411 (705)
++-||-.|+.++||..+.+ .+..++++++++-||.|..|++ .++++.... +
T Consensus 246 ~~lDnr~~~~~~l~al~~~--------~~~~~~~~~~~d~EEVGs~ga~gA~s~~l~~~l~ri~~~~~~~~~~~~~~~~l 317 (450)
T 2glf_A 246 YGQDDRICAYTALRALLSA--------NPEKSIGVIFFDKEEIGSDGNTGAKARFYLKALRQILKMQGAKDSEFVLDEVL 317 (450)
T ss_dssp TTHHHHHHHHHHHHHHHHC--------CCSSCEEEEEESCGGGTSCSSSSSSSSHHHHHHHHHHHHTTCSSSHHHHHHHH
T ss_pred ecchhhHHHHHHHHHHHhc--------CCCceEEEEEEcccccCCcchhhhcchhHHHHHHHHHHhhccccchHHHHHhh
Confidence 5679999999999986642 4678999999999999987655 232222111 1
Q ss_pred hccEEEEEEccCccc-------------------CCcccc--c---------cChhHHHHHHHHHHHcCCCCCCccchhh
Q 005260 412 ASRAVAYLNIDSAVH-------------------EAGFHA--S---------ATPQLDELLKQAAKQVQDPDNSSQTIYD 461 (705)
Q Consensus 412 ~~~~va~iNlD~~g~-------------------g~~l~~--~---------~sp~l~~l~~~~~~~v~~p~~~~~~l~~ 461 (705)
... ..|.+|+.-. |..+.. . +++.+..++.+++++..-|.. ..
T Consensus 318 ~~s--~~iS~DvahA~~Pn~~~~~~~~~~~~lg~Gpvik~~~~a~~~y~t~~~~~~~~~~~~~ia~~~~Ip~Q---~~-- 390 (450)
T 2glf_A 318 ENT--SVISGDVCAAVNPPYKDVHDLHNAPKLGYGVALVKYTGARGKYSTNDAHAEFVARVRKVLNEQGVIWQ---VA-- 390 (450)
T ss_dssp HSC--EEEEECCEECCCGGGGGGSCGGGCCCTTSCEEEESBCCSTTSTTCCBCCHHHHHHHHHHHHHTTCCEE---EC--
T ss_pred cCC--eEEEEecccCcCCCCcccccccCCccCCcCCEEEEECCCCcccccccCCHHHHHHHHHHHHHcCCCEE---EE--
Confidence 111 2455666421 211221 1 357778888888876543311 10
Q ss_pred ccccCCCCCccccCCCCCCchHHHHhcCCceEEEeeeCCCCCCCCCCccchHHH
Q 005260 462 SWTGSSNSPVIGRLGGGGSDYAAFIQHIGVPVADMSFGTGYPVYHSMYDDFIWM 515 (705)
Q Consensus 462 ~~~~~~~~~~~~~~g~~~SD~~~F~~~~GIPs~~l~~~~~~p~yHt~~Dt~~~l 515 (705)
. .... ..+ +|||-.++..+.|||+++++-- --+-||+..+...-
T Consensus 391 --~----~gr~-d~~-gGstig~i~a~~Gi~tvdiGiP--~l~MHS~~E~~~~~ 434 (450)
T 2glf_A 391 --T----LGKV-DQG-GGGTIAKFFAERGSDVIDMGPA--LLGMHSPFEISSKA 434 (450)
T ss_dssp --C----SSST-TSC-CCCCTHHHHHTTTSCEEEEECE--EBSTTSSSEEEEHH
T ss_pred --E----eccC-CCC-CCCcHHHHHhCCCCcEEEechh--hcccchHHHHhhHH
Confidence 0 0011 133 7788888888889999999742 12469998876554
No 64
>4fai_A CG5976, isoform B; alpha/beta hydrolase, PGlu formation, PE, alzheimer'S diseas pyroglutamate, PGlu-amyloid, transferase, hydrolase; HET: PBD; 1.65A {Drosophila melanogaster} PDB: 4fbe_A*
Probab=95.22 E-value=0.05 Score=57.51 Aligned_cols=53 Identities=17% Similarity=0.417 Sum_probs=46.0
Q ss_pred hhccCCCChhHHHHHHHHhhcCCCCCCCHhhHHHHHHHHHHHHHCCCceeeeEEEE
Q 005260 33 YTSTSLSDNVSISHHLHTLTRRPHVAGSEANAEAAAYVLSVFTSCSLESHIASYGV 88 (705)
Q Consensus 33 ~~~~~~i~~~~i~~~L~~lss~~r~aGt~g~~~~a~~i~~~~~~~Gl~~~~~~y~v 88 (705)
+-+ ..+...+++.|..+ -.||.+||+|..++++||.++|+++|++++.++|..
T Consensus 31 ~~~--~~~~~~~~~~l~~i-l~pR~~Gs~~~~~~~~~i~~~l~~~g~~v~~q~f~~ 83 (330)
T 4fai_A 31 YSN--LSDKLHLREAIDKI-LIPRVVGTTNHSIVREYIVQSLRDLDWDVEVNSFHD 83 (330)
T ss_dssp HHT--CCCHHHHHHHHHHH-CSCCCTTSHHHHHHHHHHHHHHHHTTCEEEEEEEEE
T ss_pred ccc--ccHHHHHHHHHHhh-cCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEeeeee
Confidence 445 66778888888887 479999999999999999999999999998888774
No 65
>4f9u_A CG32412; alpha/beta hydrolase, PGlu formation, PE, alzheimer'S diseas pyroglutamate, PGlu-amyloid, glycosylation, transferase, HY; HET: PBD NAG BMA MAN; 1.80A {Drosophila melanogaster} PDB: 4f9v_A*
Probab=95.01 E-value=0.037 Score=57.88 Aligned_cols=48 Identities=17% Similarity=0.442 Sum_probs=40.6
Q ss_pred ChhHHHHHHHHhhcCCCCCCCHhhHHHHHHHHHHHHHCCCceeeeEEEE
Q 005260 40 DNVSISHHLHTLTRRPHVAGSEANAEAAAYVLSVFTSCSLESHIASYGV 88 (705)
Q Consensus 40 ~~~~i~~~L~~lss~~r~aGt~g~~~~a~~i~~~~~~~Gl~~~~~~y~v 88 (705)
+...+.+.|+.+. .||.+||+|..++++||.++|+++|+++..++|..
T Consensus 9 ~~~~~~~~l~~il-~PR~~gs~~~~~~~~~i~~~l~~~g~~v~~~~f~~ 56 (312)
T 4f9u_A 9 DEVHFNRTLDSIL-VPRVVGSRGHQQVREYLVQSLNGLGFQTEVDEFKQ 56 (312)
T ss_dssp CHHHHHHHHHHHC-SCCCTTSHHHHHHHHHHHHHHHHTTCEEEEEEEEE
T ss_pred HHHHHHHHHHHhc-CCCCCCCHHHHHHHHHHHHHHHHCCCeEEEEeEEE
Confidence 3445666677764 79999999999999999999999999998888774
No 66
>3pb6_X Glutaminyl-peptide cyclotransferase-like protein; alpha/beta protein, alpha/beta-mixed fold, glutaminyl cyclas membrane; 1.05A {Homo sapiens} PDB: 3pb4_X 3pb7_X* 3pb8_X* 3pb9_X*
Probab=94.21 E-value=0.067 Score=56.51 Aligned_cols=58 Identities=12% Similarity=0.096 Sum_probs=49.3
Q ss_pred hHHHHhhccCCCChhHHHH-HHHHhhcCCCCCCCHhhHHHHHHHHHHHHHC--CCceeeeEEEE
Q 005260 28 FYHSLYTSTSLSDNVSISH-HLHTLTRRPHVAGSEANAEAAAYVLSVFTSC--SLESHIASYGV 88 (705)
Q Consensus 28 ~~~~~~~~~~~i~~~~i~~-~L~~lss~~r~aGt~g~~~~a~~i~~~~~~~--Gl~~~~~~y~v 88 (705)
+-.+.+.. .++.+++.+ +|+.+ -.+|.+||+|+.++++||.++|+++ |++++.++|..
T Consensus 27 ~~~~~~~~--~~~~~~~~~~~L~~~-~~~R~~gS~~~~~a~~~l~~~l~~~~~g~~v~~d~f~~ 87 (330)
T 3pb6_X 27 ARLRRVVG--QLDPQRLWSTYLRPL-LVVRTPGSPGNLQVRKFLEATLRSLTAGWHVELDPFTA 87 (330)
T ss_dssp HHHHHHHH--TCCHHHHHHHTTGGG-CSCCCTTSHHHHHHHHHHHHHHHHSTTCCEEEEEEEEE
T ss_pred HHHHhhcc--cCCHHHHHHHHHHHH-hCCCCCCCHHHHHHHHHHHHHHHHhCCCCeEEEEeeec
Confidence 44555777 799999987 78888 6799999999999999999999999 88888877653
No 67
>1y9z_A Alkaline serine protease; subtilisin-like alpha/beta domain, insert beta barrel domain hydrolase; HET: PMS; 1.40A {Pseudoalteromonas SP} PDB: 1v6c_A* 1wvm_A*
Probab=93.99 E-value=0.089 Score=57.84 Aligned_cols=39 Identities=15% Similarity=0.199 Sum_probs=33.8
Q ss_pred CCcccceEEEEEeCCC-----cchhHHHHHHHcCCeEEEEEecC
Q 005260 165 VVNVTGTVVLARYGQI-----FRGDIVHNAFEAGAAGALIFTDR 203 (705)
Q Consensus 165 gv~v~GkIvl~~~g~~-----~~~~k~~~A~~~GA~gvi~~~dp 203 (705)
..+++|||||++.+.+ .+..|+.+++++||+|+|+|++.
T Consensus 269 ~~~~~gkivl~~rg~~~~~~~~~~~~~~~~~~aGa~gvii~~~~ 312 (441)
T 1y9z_A 269 CGNMANKICLVERVGNQGSSYPEINSTKACKTAGAKGIIVYSNS 312 (441)
T ss_dssp CCCCTTEEEEEECCSCSSSSCTHHHHHHHHHHTTCSEEEEECCT
T ss_pred CCCccccEEEEeccccCcccccHHHHHHHHHhcCCeEEEEEeCC
Confidence 5689999999998764 55689999999999999999864
No 68
>2afw_A Glutaminyl-peptide cyclotransferase; alpha-beta protein, metalloprotein; HET: AHN; 1.56A {Homo sapiens} SCOP: c.56.5.8 PDB: 2afo_A 2afm_A* 2afx_A* 2afz_A 3pbb_A* 2zed_A 2zeh_A 2afu_A 2zee_A 2zeo_A 2zef_A 2zem_A 2zel_A 2zen_A 3pbe_A 2zeg_A 2zep_A 2afs_A 3si0_A* 3si2_A* ...
Probab=92.05 E-value=0.17 Score=53.22 Aligned_cols=56 Identities=11% Similarity=0.067 Sum_probs=48.0
Q ss_pred HHHHhhccCCCChhHH-HHHHHHhhcCCCCCCCHhhHHHHHHHHHHHHH--CCCceeeeEEE
Q 005260 29 YHSLYTSTSLSDNVSI-SHHLHTLTRRPHVAGSEANAEAAAYVLSVFTS--CSLESHIASYG 87 (705)
Q Consensus 29 ~~~~~~~~~~i~~~~i-~~~L~~lss~~r~aGt~g~~~~a~~i~~~~~~--~Gl~~~~~~y~ 87 (705)
....+.. .++.+++ .++|+.| -.+|.+||+++.++++||.++|++ .|++++.+.|.
T Consensus 20 ~~~~~~~--~~~~~~~~~~~l~~L-~~~r~~~s~~~~~~~~~l~~~l~~~~~G~~v~~~~~~ 78 (329)
T 2afw_A 20 ALRQIAE--GTSISEMWQNDLQPL-LIERYPGSPGSYAARQHIMQRIQRLQADWVLEIDTFL 78 (329)
T ss_dssp HHHHHHH--HCCHHHHHHHTTGGG-CSCCCTTSHHHHHHHHHHHHHHHTSSSCCEEEEEEEE
T ss_pred HHHHhhh--hcCHHHHHHHHHHHH-cCCCCCCCHHHHHHHHHHHHHHHhhCCCCEEEEEEEE
Confidence 3345666 6999999 9999999 468999999999999999999999 99998877665
No 69
>1y7e_A Probable M18-family aminopeptidase 1; aminopeptidase I, borrelia burgdorferi B31, YSCI, structural genomics, PSI; 3.20A {Borrelia burgdorferi} SCOP: b.49.3.1 c.56.5.4
Probab=91.82 E-value=0.031 Score=61.67 Aligned_cols=141 Identities=21% Similarity=0.168 Sum_probs=77.5
Q ss_pred CCCCChhHHHHHHHHHHHHHHhHHcCCCCCCcEEEEEeCCccCCCCChH----HHHHHHHHhhh-----ccE-E------
Q 005260 353 GAVDPNSGTAALLEVAQRLNKLQKRGWKPRRTIVLCNWDAEEYGLIGST----EWVEENREMLA-----SRA-V------ 416 (705)
Q Consensus 353 GA~DnaSG~A~lLElAr~l~~l~~~g~~p~rtI~Fv~~~~EE~Gl~GS~----~~~~~~~~~l~-----~~~-v------ 416 (705)
++-||-.|++++|++.+.+. . .+.+++.+++++-||.|..|++ .|+++....+. ... .
T Consensus 252 ~~lDdr~~~~~~l~al~~~~-----~-~~~~~~~~~~~d~EEVGs~ga~ga~s~~l~~~l~ri~~~~~~~~~~~~~~~~~ 325 (458)
T 1y7e_A 252 YGQDDKICVFTSLESIFDLE-----E-TPNKTAICFLVDKEEIGSTGSTGLDSRYLEYFVSDMIFKIKKSEYNNLHVQKA 325 (458)
T ss_dssp SSHHHHHHHHHHHHHHSSSS-----C-CCSSCEECCCBCSTTC--------CTTHHHHHHHHHHHHHSSTTCCTHHHHHH
T ss_pred ecCccHHHHHHHHHHHHhhh-----c-cCCceEEEEEEcccccCcccchhhccchHHHHHHHHHHhhccCCcchHHHHHH
Confidence 34589999999999866431 1 4788999999999999988775 34444333321 110 1
Q ss_pred ----EEEEccCcccC-------------------Ccccc-c----------cChhHHHHHHHHHHHcCCCCCCccchhhc
Q 005260 417 ----AYLNIDSAVHE-------------------AGFHA-S----------ATPQLDELLKQAAKQVQDPDNSSQTIYDS 462 (705)
Q Consensus 417 ----a~iNlD~~g~g-------------------~~l~~-~----------~sp~l~~l~~~~~~~v~~p~~~~~~l~~~ 462 (705)
.+|.+|+.-.. ..+.. . +++.+...+.+++++..-|.. ..
T Consensus 326 ~~~S~~is~Dv~ha~dPn~~~~~~~~~~~~lg~G~vIk~~d~~~~~y~t~~~~~~~~~~l~~~a~~~~Ip~Q---~~--- 399 (458)
T 1y7e_A 326 LWNSKSISADVCAAINPLFSSVHDEQNAPQLGYGIPIMKYTGHGGKSMASDADAELVSYIRQLLNKNNIAWQ---VA--- 399 (458)
T ss_dssp HHHCEEEECCCEECCCC-------CTTSCCTTSCEEEEEEC-----------CHHHHHHHHHHHHHHTCCEE---EE---
T ss_pred HhcceEEEEecccccCCCCcccccccCCcccCCCcEEEEEcCCCCccccccCCHHHHHHHHHHHHHcCCCeE---EE---
Confidence 46778875322 11121 1 156677777777776443311 10
Q ss_pred cccCCCCCccccCCCCCCchHHHHhcCCceEEEeeeCCCCCCCCCCccchHH
Q 005260 463 WTGSSNSPVIGRLGGGGSDYAAFIQHIGVPVADMSFGTGYPVYHSMYDDFIW 514 (705)
Q Consensus 463 ~~~~~~~~~~~~~g~~~SD~~~F~~~~GIPs~~l~~~~~~p~yHt~~Dt~~~ 514 (705)
. .++.+. + +||+-.+++...|||+++++.. --..||+..+...
T Consensus 400 -~----~~r~d~-~-~GgT~~~~~a~~Gi~tvdiGiP--~~~mHS~~E~~~~ 442 (458)
T 1y7e_A 400 -T----LGKVEE-G-GGGTVAKFLAGYGIRTIDMGPA--VISMHSPMEITSK 442 (458)
T ss_dssp -E----ECC-------CHHHHHHHHHHTCEEEEECCE--EBSTTSSSEEEEH
T ss_pred -E----eeccCC-C-CcCcHHHHHhCCCCCEEEEchh--hcccchHHHHhhH
Confidence 0 000111 2 4455567666689999998642 2256998877654
No 70
>3vat_A Dnpep, aspartyl aminopeptidase; alpha-beta-alpha sandwich, binuclea center, M18 peptidase, MH CLAN, tetrahedral aminopeptidase, hydrolase; 2.10A {Bos taurus} PDB: 3var_A 3l6s_A* 4dyo_A*
Probab=91.74 E-value=0.17 Score=56.18 Aligned_cols=143 Identities=15% Similarity=0.137 Sum_probs=79.9
Q ss_pred CCCCChhHHHHHHHHHHHHHHhHHc-CCCCCCcEEEEEeCCccCCCCChHH----HHHHHH--------------Hhhhc
Q 005260 353 GAVDPNSGTAALLEVAQRLNKLQKR-GWKPRRTIVLCNWDAEEYGLIGSTE----WVEENR--------------EMLAS 413 (705)
Q Consensus 353 GA~DnaSG~A~lLElAr~l~~l~~~-g~~p~rtI~Fv~~~~EE~Gl~GS~~----~~~~~~--------------~~l~~ 413 (705)
++-||-.|+.++||..+.+.+.... .-.+..++ +++|+-||.|+.|++- +..+.. ..+..
T Consensus 282 ~~lDnr~~~~~~leaL~~~~~~~~~~~~~~~~~v-~v~~dqEEVGs~ga~gA~s~~~pdvl~ri~~~~~~~~~~~~~l~~ 360 (496)
T 3vat_A 282 PRLDNLHSCFCALQALIDSCSAPASLAADPHVRM-IALYDNEEVGSESAQGAQSLLTELVLRRISASPQHLTAFEEAIPK 360 (496)
T ss_dssp TTHHHHHHHHHHHHHHHHHTTSHHHHHHCCSEEE-EEEESCGGGTSCSSSSTTSTHHHHHHHHHHCCSSCTTHHHHHGGG
T ss_pred eccccHHHHHHHHHHHHhhhccccccccCCCcEE-EEEEccCCcCCCcchhccccccHHHHHHHHhccCchHHHHHHhhc
Confidence 6779999999999987765321000 00133444 9999999999865543 222211 11111
Q ss_pred cEEEEEEccCcc-------------------cCCccc------cccChhHHHHHHHHHHHcCCCCCCccchhhccccCCC
Q 005260 414 RAVAYLNIDSAV-------------------HEAGFH------ASATPQLDELLKQAAKQVQDPDNSSQTIYDSWTGSSN 468 (705)
Q Consensus 414 ~~va~iNlD~~g-------------------~g~~l~------~~~sp~l~~l~~~~~~~v~~p~~~~~~l~~~~~~~~~ 468 (705)
. ..|.+|+.- .|..+. ..+++.+..++.+++++..-|.. .. .
T Consensus 361 S--~~IS~DvahA~dPn~~~~~~~~~~~~LG~GpvIK~~~~~~y~t~~~~~~~l~~ia~~~~Ip~Q---~~----v---- 427 (496)
T 3vat_A 361 S--YMISADMAHAVHPNYLDKHEENHRPLFHKGPVIKVNSKQRYASNAVSEALIREVASSVGVPLQ---DL----M---- 427 (496)
T ss_dssp C--EEEEECCEECCBTTBGGGSCTTCCCCTTSCCEEECCTTTTSCCCHHHHHHHHHHHHHHTCCCE---EE----C----
T ss_pred C--eEEEEeCCCCCCCCCcccccccCCcccCcCCEEEEcCCCCcccCHHHHHHHHHHHHHcCCCEE---EE----E----
Confidence 1 356677641 122221 12467788888888876544422 11 0
Q ss_pred CCccccCCCCCCchHHHHh-cCCceEEEeeeCCCCCCCCCCccchHH
Q 005260 469 SPVIGRLGGGGSDYAAFIQ-HIGVPVADMSFGTGYPVYHSMYDDFIW 514 (705)
Q Consensus 469 ~~~~~~~g~~~SD~~~F~~-~~GIPs~~l~~~~~~p~yHt~~Dt~~~ 514 (705)
.+.+ .+ +||+-.++.. +.|||+++++-. --+-||+..+...
T Consensus 428 -~r~D-~~-gGgTig~i~~s~~Gi~tvdIGiP--~ryMHS~~E~~~~ 469 (496)
T 3vat_A 428 -VRND-SP-CGTTIGPILASRLGLRVLDLGSP--QLAMHSIRETACT 469 (496)
T ss_dssp -CCTT-SC-CCCCHHHHHHHHHTCEEEEEECE--EESTTSSSEEEES
T ss_pred -ecCC-CC-CcchHHHHHhcccCCcEEEecHh--hhccccHHHHhhH
Confidence 0011 22 4566667664 479999999742 1246898776543
No 71
>2ijz_A Probable M18-family aminopeptidase 2; putative aminopeptidase 2, structura genomics, PSI, protein structure initiative; 3.00A {Pseudomonas aeruginosa}
Probab=91.55 E-value=0.11 Score=56.98 Aligned_cols=140 Identities=16% Similarity=0.167 Sum_probs=82.4
Q ss_pred cCCCCCCChhHHHHHHHHHHHHHHhHHcCCCCCCcEEEEEeCCccCCCCChHHHHHHHHHhhhccE-------------E
Q 005260 350 WTFGAVDPNSGTAALLEVAQRLNKLQKRGWKPRRTIVLCNWDAEEYGLIGSTEWVEENREMLASRA-------------V 416 (705)
Q Consensus 350 ~~~GA~DnaSG~A~lLElAr~l~~l~~~g~~p~rtI~Fv~~~~EE~Gl~GS~~~~~~~~~~l~~~~-------------v 416 (705)
....+-||-.|++++|++.+.+. .+..++.+++ +-||.|..|++--.....+...+++ -
T Consensus 229 I~s~~lDdr~~~~~~l~al~~~~-------~~~~~v~~~f-d~EEVGs~ga~gA~s~~~~~~l~ri~~~~~~~~~~~~~s 300 (428)
T 2ijz_A 229 IAGARLDNLLSCHAGLEALLNAE-------GDENCILVCT-DHEEVGSCSHCGADGPFLEQVLRRLLPEGDAFSRAIQRS 300 (428)
T ss_dssp SSCCCSSCSSTTTTTTTHHHHTT-------SCSSSCEEEE-CBSCTTTTCHHHHSSCCTTTSCCSSSSSSSSSTTTTTSC
T ss_pred EEeecCccHHHHHHHHHHHHhcc-------cCCceEEEEE-eccccCccchhhhhccccHHHHHHhhhhhhHHHhhhhcC
Confidence 33478899999999999876542 3557776666 9999999998753222222111111 2
Q ss_pred EEEEccCccc-------------------CCcccc------ccChhHHHHHHHHHHHcCCCCCCccchhhccccCCCCCc
Q 005260 417 AYLNIDSAVH-------------------EAGFHA------SATPQLDELLKQAAKQVQDPDNSSQTIYDSWTGSSNSPV 471 (705)
Q Consensus 417 a~iNlD~~g~-------------------g~~l~~------~~sp~l~~l~~~~~~~v~~p~~~~~~l~~~~~~~~~~~~ 471 (705)
.+|.+|+.-. |..+.. .+++.+...+.+++++..-|.. .. . ..
T Consensus 301 ~~is~Dv~ha~~Pn~~~~~~~~~~~~lg~G~vIk~~~~~~~~~~~~~~~~l~~~a~~~~Ip~Q---~~----~-----~~ 368 (428)
T 2ijz_A 301 LLVSADNAHGVHPNYADRHDANHGPALNGGPVIKINSNQRYATNSETAGFFRHLCQDSEVPVQ---SF----V-----TR 368 (428)
T ss_dssp CEEEECCCCCCCSSCGGGCCSSCCCSSSCCCBCCCCSSSCCSCCHHHHTTTTHHHHHTCCCCC---BC----C-----CC
T ss_pred EEEEEecccccCCCCcccccccCCcccCCCcEEEEECCCCCCCCHHHHHHHHHHHHHcCCCeE---EE----E-----Ee
Confidence 4567777532 111111 1345566666666665433321 00 0 00
Q ss_pred cccCCCCCCchHHHHh-cCCceEEEeeeCCCCCCCCCCccchH
Q 005260 472 IGRLGGGGSDYAAFIQ-HIGVPVADMSFGTGYPVYHSMYDDFI 513 (705)
Q Consensus 472 ~~~~g~~~SD~~~F~~-~~GIPs~~l~~~~~~p~yHt~~Dt~~ 513 (705)
...+ +|||-.++.. ..|||+++++.. --+-||+..+..
T Consensus 369 -~d~~-gGsd~g~i~~~~~Gi~tvdiGip--~~~mHS~~E~~~ 407 (428)
T 2ijz_A 369 -SDMG-CGSTIGPITASQVGVRTVDIGLP--TFAMHSIRELAG 407 (428)
T ss_dssp -SSCC-CCCCCSTTTGGGGSCCEEEECCC--CCSCSSSSCCCC
T ss_pred -CCCC-ccchHHHHHHhCCCCCEEEEchh--hcccchHHHHhh
Confidence 1133 7899888865 579999999752 234688776544
No 72
>2glj_A Probable M18-family aminopeptidase 1; aminopeptidase I, NYSGXRC, structural genomics, PSI, protein structure initiative; 3.20A {Clostridium acetobutylicum}
Probab=91.29 E-value=0.18 Score=55.56 Aligned_cols=140 Identities=19% Similarity=0.194 Sum_probs=82.5
Q ss_pred CCCCChhHHHHHHHHHHHHHHhHHcCCCCCCcEEEEEeCCccCCCCChH----HHHHHHHHhhhccE----EE-------
Q 005260 353 GAVDPNSGTAALLEVAQRLNKLQKRGWKPRRTIVLCNWDAEEYGLIGST----EWVEENREMLASRA----VA------- 417 (705)
Q Consensus 353 GA~DnaSG~A~lLElAr~l~~l~~~g~~p~rtI~Fv~~~~EE~Gl~GS~----~~~~~~~~~l~~~~----va------- 417 (705)
++-||-.|+.++|++.+.+. .+.+++++++++-||.|..|++ .|+++....+.... -.
T Consensus 258 ~~lDdr~~~~~~l~al~~~~-------~~~~~~~~~~~d~EEVGs~ga~ga~s~~l~~~l~ri~~~~~~~~~~~~~~~~~ 330 (461)
T 2glj_A 258 YGQDDRICAYTSFEAMLEMK-------NAKKTCITILVDKEEVGSIGATGMQSKFFENTVADIMSLCGDYDELKLRKALY 330 (461)
T ss_dssp TTHHHHHHHHHHHHHHHTCC-------SCSSCEEEEEECCGGGTCCTTTTSSSTTHHHHHHHHTC-----CCSCCCHHHH
T ss_pred ecchhHHHHHHHHHHHHhhc-------cCCCeEEEEEEccCCCCCccccccccchHHHHHHHHHHhcCCCchHHHHHHHh
Confidence 45589999999999866431 4788999999999999988765 34444333332100 11
Q ss_pred ---EEEccCcccC-------------------Ccccc----c-------cChhHHHHHHHHHHHcCCCCCCccchhhccc
Q 005260 418 ---YLNIDSAVHE-------------------AGFHA----S-------ATPQLDELLKQAAKQVQDPDNSSQTIYDSWT 464 (705)
Q Consensus 418 ---~iNlD~~g~g-------------------~~l~~----~-------~sp~l~~l~~~~~~~v~~p~~~~~~l~~~~~ 464 (705)
+|.+|+.-.. ..+.. . +++.+...+.+++++..-|.. .. .
T Consensus 331 ~S~~iS~Dv~ha~~pn~~~~~~~~~~~~lg~G~vIk~~~~~~g~y~~~~~~~~~~~~l~~ia~~~~Ip~Q---~~----~ 403 (461)
T 2glj_A 331 NSEMLSSDVSAAFDPNYPNVMEKRNSAYLGKGIVFNKYTGSRGKSGCNDANPEYIAELRRILSKESVNWQ---TA----E 403 (461)
T ss_dssp TCEECCBCCEEBCCTTCCTTSCSTTSBCTTSCEEEBSCCCSTTSCSSCCCCHHHHHHHHHHHHHTCCCEE---EC----C
T ss_pred cCcEEEEecccccCCCCcccccccCCcccCCCcEEEEEcCCCCccccccCCHHHHHHHHHHHHHcCCCeE---EE----e
Confidence 5666765321 11121 1 257777788888776443311 10 0
Q ss_pred cCCCCCccccCCCCCCchHHHHhcCCceEEEeeeCCCCCCCCCCccchHH
Q 005260 465 GSSNSPVIGRLGGGGSDYAAFIQHIGVPVADMSFGTGYPVYHSMYDDFIW 514 (705)
Q Consensus 465 ~~~~~~~~~~~g~~~SD~~~F~~~~GIPs~~l~~~~~~p~yHt~~Dt~~~ 514 (705)
..+.+. + +||+-.+.+.+.|||+++++.. --.-||+..+...
T Consensus 404 ----~gr~d~-~-~GgTig~~~a~~Gi~tvdiGiP--~l~MHS~~E~~~~ 445 (461)
T 2glj_A 404 ----LGKVDQ-G-GGGTIAYILAEYGMQVIDCGVA--LLNMHAPWEISSK 445 (461)
T ss_dssp ----SSSSSS-S-CCCCTHHHHHTTTCBCCBBCCE--EESTTSSSEEEEH
T ss_pred ----eeccCC-C-CcccHHHHHhCCCCCEEEEchh--hcccchHHHHhhH
Confidence 001111 2 4555667777789999998642 1245888876554
No 73
>1tkj_A Aminopeptidase, SGAP; double-zinc metalloproteinase, calcium activation, protein- inhibitor complex, hydrolase; HET: MED; 1.15A {Streptomyces griseus} SCOP: c.56.5.4 PDB: 1f2o_A 1f2p_A* 1cp7_A 1qq9_A* 1tf9_A* 1tf8_A* 1tkh_A* 1tkf_A* 1xbu_A* 1xjo_A
Probab=90.25 E-value=0.53 Score=48.26 Aligned_cols=49 Identities=12% Similarity=0.223 Sum_probs=42.9
Q ss_pred CCChhHHHHHHHHhhcC------CCCCCCHhhHHHHHHHHHHHHHCCCceeeeEE
Q 005260 38 LSDNVSISHHLHTLTRR------PHVAGSEANAEAAAYVLSVFTSCSLESHIASY 86 (705)
Q Consensus 38 ~i~~~~i~~~L~~lss~------~r~aGt~g~~~~a~~i~~~~~~~Gl~~~~~~y 86 (705)
.++.+++.++|+.|.+. +|.+||+++.++++||+++|+++|++++.+++
T Consensus 3 ~i~~~~~~~~l~~L~~i~s~s~~~r~~~~~~e~~~~~~i~~~l~~~g~~v~~~~~ 57 (284)
T 1tkj_A 3 DIPLANVKAHLTQLSTIAANNGGNRAHGRPGYKASVDYVKAKLDAAGYTTTLQQF 57 (284)
T ss_dssp CCCHHHHHHHHHHHHHHHHTTTTCCCTTSHHHHHHHHHHHHHHHHHTCEEEEEEE
T ss_pred cCCHHHHHHHHHHHHcccccCCCCCCCCCHHHHHHHHHHHHHHHHcCCeEEEEEe
Confidence 57889999999999863 58889999999999999999999999877655
No 74
>1rtq_A Bacterial leucyl aminopeptidase; bimetallic, zinc, high resolution, hydrolase; 0.95A {Vibrio proteolyticus} SCOP: c.56.5.4 PDB: 1txr_A* 1xry_A* 2dea_A 2nyq_A 3fh4_A 3vh9_A* 1lok_A 1cp6_A 1ft7_A* 1igb_A* 1amp_A 2iq6_A 2prq_A 3b3v_A 3b3w_A 3b7i_A* 3b3t_A 3b35_A 3b3c_A* 3b3s_A ...
Probab=86.72 E-value=1.1 Score=46.32 Aligned_cols=47 Identities=15% Similarity=0.222 Sum_probs=41.8
Q ss_pred HHhhccCCCChhHHHHHHHHhhcCC-CCCCCHhhHHHHHHHHHHHHHCCC
Q 005260 31 SLYTSTSLSDNVSISHHLHTLTRRP-HVAGSEANAEAAAYVLSVFTSCSL 79 (705)
Q Consensus 31 ~~~~~~~~i~~~~i~~~L~~lss~~-r~aGt~g~~~~a~~i~~~~~~~Gl 79 (705)
+.++. .++.+++.++|+.|++.+ |.++|+++.++++||+++|+++|+
T Consensus 11 ~~~~~--~~~~~~~~~~l~~L~~i~sr~~~s~~~~~~~~~l~~~l~~~g~ 58 (299)
T 1rtq_A 11 TAWLP--QVDASQITGTISSLESFTNRFYTTTSGAQASDWIASEWQALSA 58 (299)
T ss_dssp HHHGG--GCCHHHHHHHHHHHHTSSCCCTTSHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHH--hcCHHHHHHHHHHHhCcCCCCCCCchHHHHHHHHHHHHHHhcC
Confidence 45666 699999999999999985 889999999999999999999874
No 75
>1q7l_A Aminoacylase-1; catalysis, enzyme dimerization, site- directed mutagenesis, structure comparison, zinc, hydrolase; 1.40A {Homo sapiens} SCOP: c.56.5.4
Probab=82.33 E-value=1.3 Score=42.71 Aligned_cols=48 Identities=10% Similarity=0.031 Sum_probs=41.3
Q ss_pred CCChhHHHHHHHHhhcCCCCCCCHhhHHHHHHHHHHHHHCCCceeeeE
Q 005260 38 LSDNVSISHHLHTLTRRPHVAGSEANAEAAAYVLSVFTSCSLESHIAS 85 (705)
Q Consensus 38 ~i~~~~i~~~L~~lss~~r~aGt~g~~~~a~~i~~~~~~~Gl~~~~~~ 85 (705)
.++.+++.+.|+.|.+.+-.+|++++.++++||++.|+++|++++..+
T Consensus 6 ~~~~~~~~~~l~~lv~i~s~s~~~~e~~~~~~l~~~l~~~g~~~~~~~ 53 (198)
T 1q7l_A 6 PEEEHPSVTLFRQYLRIRTVQPKPDYGAAVAFFEETARQLGLGCQKVE 53 (198)
T ss_dssp -CCCCHHHHHHHHHHTSCCBTTSCCHHHHHHHHHHHHHHHTCEEEEEE
T ss_pred chhHHHHHHHHHHHhcCCCCCCCcCHHHHHHHHHHHHHHCCCeEEEEE
Confidence 467788999999999999888877788999999999999999976654
No 76
>3n5f_A L-carbamoylase, N-carbamoyl-L-amino acid hydrolase; hinge domain, M20 peptidase family, evolution, residue, dimerization domain; 2.75A {Bacillus stearothermophilus}
Probab=70.42 E-value=4.1 Score=43.67 Aligned_cols=47 Identities=13% Similarity=0.031 Sum_probs=39.1
Q ss_pred CChhHHHHHHHHhhcCC--------CCCCCHhhHHHHHHHHHHHHHCCCceeeeE
Q 005260 39 SDNVSISHHLHTLTRRP--------HVAGSEANAEAAAYVLSVFTSCSLESHIAS 85 (705)
Q Consensus 39 i~~~~i~~~L~~lss~~--------r~aGt~g~~~~a~~i~~~~~~~Gl~~~~~~ 85 (705)
++.+++.+.|+.|++.+ |.+.|..+.++++||.++|+++|++++.+.
T Consensus 2 ~~~~~~~~~l~~l~~i~s~~~~g~~r~~~s~~e~~~~~~l~~~l~~~g~~~~~d~ 56 (408)
T 3n5f_A 2 IQGERLWQRLMELGEVGKQPSGGVTRLSFTAEERRAKDLVASYMREAGLFVYEDA 56 (408)
T ss_dssp -CHHHHHHHHHHHHTTTBCTTSSBCCCTTSHHHHHHHHHHHHHHHHHTCEEEECT
T ss_pred CCHHHHHHHHHHHHccCCCCCCCcccCCCCHHHHHHHHHHHHHHHHCCCEEEEcC
Confidence 56789999999999764 445689999999999999999999876643
No 77
>3gb0_A Peptidase T; NP_980509.1, aminopeptidase PEPT, peptidase family M20/M25/M structural genomics, joint center for structural genomics; 2.04A {Bacillus cereus atcc 10987}
Probab=65.74 E-value=8.1 Score=40.60 Aligned_cols=46 Identities=13% Similarity=0.132 Sum_probs=39.7
Q ss_pred CCChhHHHHHHHHhhcCCCCCCCHhhHHHHHHHHHHHHHCCCceeeeE
Q 005260 38 LSDNVSISHHLHTLTRRPHVAGSEANAEAAAYVLSVFTSCSLESHIAS 85 (705)
Q Consensus 38 ~i~~~~i~~~L~~lss~~r~aGt~g~~~~a~~i~~~~~~~Gl~~~~~~ 85 (705)
.++.+++.+.|+.|.+.|-.+|. +.++++||.+.|+++|++++.+.
T Consensus 2 ~~~~~~~~~~l~~l~~~ps~s~~--e~~~~~~l~~~l~~~G~~v~~~~ 47 (373)
T 3gb0_A 2 MINQERLVNEFMELVQVDSETKF--EAEICKVLTKKFTDLGVEVFEDD 47 (373)
T ss_dssp CSCHHHHHHHHHHHHTSCCBTTC--CHHHHHHHHHHHHHTTCEEEECS
T ss_pred CCCHHHHHHHHHHHhcccCCCcc--HHHHHHHHHHHHHHCCCEEEEec
Confidence 46789999999999999877765 68999999999999999876654
No 78
>1cg2_A Carboxypeptidase G2; metallocarboxypeptidase, hydrolase; 2.50A {Pseudomonas SP} SCOP: c.56.5.4 d.58.19.1
Probab=64.72 E-value=20 Score=37.88 Aligned_cols=46 Identities=11% Similarity=0.159 Sum_probs=38.8
Q ss_pred ChhHHHHHHHHhhcCCCCCCCH-hhHHHHHHHHHHHHHCCCceeeeE
Q 005260 40 DNVSISHHLHTLTRRPHVAGSE-ANAEAAAYVLSVFTSCSLESHIAS 85 (705)
Q Consensus 40 ~~~~i~~~L~~lss~~r~aGt~-g~~~~a~~i~~~~~~~Gl~~~~~~ 85 (705)
..+++.+.|+.|.+.+..+|.+ +..++++||++.|+++|++++..+
T Consensus 17 ~~~~~~~~l~~lv~i~s~s~~~~~~~~~~~~l~~~l~~~G~~~~~~~ 63 (393)
T 1cg2_A 17 EQPAVIKTLEKLVNIETGTGDAEGIAAAGNFLEAELKNLGFTVTRSK 63 (393)
T ss_dssp HHHHHHHHHHHHHTSCCBTTCHHHHHHHHHHHHHHHHHTTCEEEEEE
T ss_pred hHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHcCCeEEEEe
Confidence 4577889999999999888875 557899999999999999876554
No 79
>3mru_A Aminoacyl-histidine dipeptidase; metalloprotease, homodimer, hydrolase; 3.00A {Vibrio alginolyticus}
Probab=56.19 E-value=7.1 Score=43.08 Aligned_cols=54 Identities=13% Similarity=0.190 Sum_probs=44.0
Q ss_pred CCChhHHHHHHHHhhcCCCCCCCHhhHHHHHHHHHHHHHCCCceeeeE-EEEEEeee
Q 005260 38 LSDNVSISHHLHTLTRRPHVAGSEANAEAAAYVLSVFTSCSLESHIAS-YGVSLTYP 93 (705)
Q Consensus 38 ~i~~~~i~~~L~~lss~~r~aGt~g~~~~a~~i~~~~~~~Gl~~~~~~-y~v~~~~P 93 (705)
.++.+++.+.++.|.+.|+.+|. +.++++||.+.|+++|++++.+. ..++...|
T Consensus 10 ~~~~~~~~~~~~~L~~ips~s~~--e~~~~~~l~~~l~~~G~~v~~~~~~nv~a~~~ 64 (490)
T 3mru_A 10 TLSPAPLWQFFDKICSIPHPSKH--EEALAQYIVTWATEQGFDVRRDPTGNVFIKKP 64 (490)
T ss_dssp GSSSHHHHHHHHHHHHSCCBTTC--CTTHHHHHHHHHHHTTCEEEECTTCCEEEEEC
T ss_pred ccCHHHHHHHHHHHhCCCCCCCC--HHHHHHHHHHHHHHcCCEEEEcCCCeEEEEEc
Confidence 58899999999999999998886 68999999999999999876543 23444443
No 80
>3ife_A Peptidase T; metallopeptidase, aminopeptidase, hydro metal-binding, metalloprotease, protease; HET: SUC; 1.55A {Bacillus anthracis}
Probab=54.17 E-value=12 Score=40.41 Aligned_cols=54 Identities=9% Similarity=0.111 Sum_probs=40.9
Q ss_pred hhHHHHHHHHhhcCCCCCC--------CHhhHHHHHHHHHHHHHCCCc-eeeeE-EEEEEeeeC
Q 005260 41 NVSISHHLHTLTRRPHVAG--------SEANAEAAAYVLSVFTSCSLE-SHIAS-YGVSLTYPV 94 (705)
Q Consensus 41 ~~~i~~~L~~lss~~r~aG--------t~g~~~~a~~i~~~~~~~Gl~-~~~~~-y~v~~~~P~ 94 (705)
.+++.+.|+.|.+.+..++ |+++.++++||.+.|+++|++ ++.++ ..++..+|.
T Consensus 26 ~~~~~~~l~~lv~i~s~s~~~~~~~~~~~~e~~~~~~l~~~l~~~G~~~~~~d~~~nv~a~~~g 89 (434)
T 3ife_A 26 KEELIERFTRYVKIDTQSNEDSHTVPTTPGQIEFGKLLVEELKEVGLTEVTMDDNGYVMATLPA 89 (434)
T ss_dssp HHHHHHHHHHHHTSCCBCCTTCCSSSSSHHHHHHHHHHHHHHHHHTCEEEEECTTSCEEEEECC
T ss_pred HHHHHHHHHhhEEeeccCCCccCCCCCCHHHHHHHHHHHHHHHHcCCceEEECCCcEEEEEeCC
Confidence 3568888888888776555 678999999999999999997 76654 235555553
No 81
>2v8h_A Beta-alanine synthase; amidohydrolase, alpha and beta protein, DI-zinc center, COMP N-carbamyl-beta-alanine, hydrolase; HET: BCN; 2.0A {Saccharomyces kluyveri} PDB: 2v8d_A* 2vl1_A 2v8g_A 2v8v_A 1r43_A 1r3n_A
Probab=51.98 E-value=14 Score=40.50 Aligned_cols=46 Identities=9% Similarity=0.105 Sum_probs=38.3
Q ss_pred CChhHHHHHHHHh-hcCCCC---------------CCCHhhHHHHHHHHHHHHHCCCceeee
Q 005260 39 SDNVSISHHLHTL-TRRPHV---------------AGSEANAEAAAYVLSVFTSCSLESHIA 84 (705)
Q Consensus 39 i~~~~i~~~L~~l-ss~~r~---------------aGt~g~~~~a~~i~~~~~~~Gl~~~~~ 84 (705)
++.+++.+.|+.| .+.+.. +.|.++.++++||.+.|+++|++++.+
T Consensus 29 ~~~~~~~~~l~~L~v~i~s~s~~~~~~~~~g~~r~~~s~~e~~~~~~l~~~l~~~G~~v~~d 90 (474)
T 2v8h_A 29 IASGRLNQTILETGSQFGGVARWGQESHEFGMRRLAGTALDGAMRDWFTNECESLGCKVKVD 90 (474)
T ss_dssp CCTTHHHHHHHHHHHHTTEECCCSSSTTCCEECCCTTSHHHHHHHHHHHHHHHHTTCEEEEB
T ss_pred CCHHHHHHHHHHHhhhcCCccccccccccCCcccCCCCHHHHHHHHHHHHHHHHcCCEEEEe
Confidence 6778899999999 776543 447899999999999999999987654
No 82
>1q7l_B Aminoacylase-1; catalysis, enzyme dimerization, site- directed mutagenesis, structure comparison, zinc, hydrolase; 1.40A {Homo sapiens} SCOP: c.56.5.4
Probab=50.72 E-value=30 Score=28.09 Aligned_cols=60 Identities=13% Similarity=0.110 Sum_probs=40.4
Q ss_pred cCCCCCCchHHHHhcCCceEEEeeeCCCC-CCCCCCccchHHHHhhCCcchHHHHHHHHHHHHHHHHhCCCC
Q 005260 474 RLGGGGSDYAAFIQHIGVPVADMSFGTGY-PVYHSMYDDFIWMEKFGDPTFQRHVAAASMWGLVALQLADEE 544 (705)
Q Consensus 474 ~~g~~~SD~~~F~~~~GIPs~~l~~~~~~-p~yHt~~Dt~~~l~~~~dp~~~~~~~~a~~~~~l~~~La~~~ 544 (705)
..+ ++||-.-|.. .|||++.|+-+... ..-|+...-.+ .+.+...++++..++.++++.+
T Consensus 22 ~~~-g~TDar~~~~-~gip~v~fGPg~~~~~~~H~~dE~v~---------i~~l~~~~~iy~~~i~~~~~~~ 82 (88)
T 1q7l_B 22 IMP-AAGDNRYIRA-VGVPALGFSPMNRTPVLLHDHDERLH---------EAVFLRGVDIYTRLLPALASVP 82 (88)
T ss_dssp ECC-SCSHHHHHHH-TTCCEEEECCCCSCCCCTTSTTCEEE---------HHHHHHHHHHHHHHHHHHHTCC
T ss_pred eec-eeCcHHHHHH-cCCCEEEECCCCCCcccccCCCCeeE---------HHHHHHHHHHHHHHHHHHHcCC
Confidence 344 7899987766 69999987643221 23577654432 2335577889999999998863
No 83
>2zog_A Cytosolic non-specific dipeptidase; metallopeptidase, protein-inhibitor complex, CNDP2, CNDP DIP 2, bestatin, L-carnosine, carnosinase, Zn; HET: BES; 1.70A {Mus musculus} PDB: 2zof_A*
Probab=49.07 E-value=27 Score=37.93 Aligned_cols=46 Identities=4% Similarity=-0.081 Sum_probs=38.6
Q ss_pred ChhHHHHHHHHhhcCCCCCCCH----hhHHHHHHHHHHHHHCCCceeeeE
Q 005260 40 DNVSISHHLHTLTRRPHVAGSE----ANAEAAAYVLSVFTSCSLESHIAS 85 (705)
Q Consensus 40 ~~~~i~~~L~~lss~~r~aGt~----g~~~~a~~i~~~~~~~Gl~~~~~~ 85 (705)
..+++.+.++.|.+.|..++.+ ++.++++||++.|+++|++++.++
T Consensus 18 ~~~~~~~~l~~l~~~ps~s~~e~~~~~~~~~~~~l~~~l~~~G~~~~~~~ 67 (479)
T 2zog_A 18 NQDRYVKKLAEWVAIQSVSAWPEKRGEIRRMMEVAAADVQRLGGSVELVD 67 (479)
T ss_dssp THHHHHHHHHHHHHSCCBTTCGGGHHHHHHHHHHHHHHHHHTTCEEEEEC
T ss_pred hHHHHHHHHHHHhcCCCccCCcccchHHHHHHHHHHHHHHHcCCeEEEee
Confidence 4577889999999998888764 568999999999999999876654
No 84
>3rza_A Tripeptidase; phosphorylase/hydrolase-like, structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; HET: CIT PG4 PGE; 2.10A {Staphylococcus aureus subsp}
Probab=48.08 E-value=16 Score=38.83 Aligned_cols=46 Identities=9% Similarity=0.154 Sum_probs=39.4
Q ss_pred CCChhHHHHHHHHhhcCCCCCCCHhhHHHHHHHHHHHHHCCCceeeeE
Q 005260 38 LSDNVSISHHLHTLTRRPHVAGSEANAEAAAYVLSVFTSCSLESHIAS 85 (705)
Q Consensus 38 ~i~~~~i~~~L~~lss~~r~aGt~g~~~~a~~i~~~~~~~Gl~~~~~~ 85 (705)
.++.+++.+.++.|.+.|-.+|. +.++++||.+.|+++|++++.+.
T Consensus 20 ~~~~~~~~~~l~~L~~ips~s~~--E~~~~~~l~~~l~~~G~~v~~~~ 65 (396)
T 3rza_A 20 MINEQRLLNTFLELVQIDSETGN--ESTIQPILKEKFIALGLDVKEDE 65 (396)
T ss_dssp CSCHHHHHHHHHHHHTSCCBTTC--TTTHHHHHHHHHHHTTCEEEECS
T ss_pred eecHHHHHHHHHHHeecCCCCcC--HHHHHHHHHHHHHHCCCEEEEec
Confidence 47889999999999999877765 67899999999999999876543
No 85
>2qyv_A XAA-His dipeptidase; YP_718209.1, structural genomi center for structural genomics, JCSG, protein structure INI PSI-2, hydrolase; 2.11A {Haemophilus somnus 129PT}
Probab=47.25 E-value=17 Score=39.74 Aligned_cols=45 Identities=7% Similarity=0.071 Sum_probs=39.5
Q ss_pred CCChhHHHHHHHHhhcCCCCCCCHhhHHHHHHHHHHHHHCCCceeee
Q 005260 38 LSDNVSISHHLHTLTRRPHVAGSEANAEAAAYVLSVFTSCSLESHIA 84 (705)
Q Consensus 38 ~i~~~~i~~~L~~lss~~r~aGt~g~~~~a~~i~~~~~~~Gl~~~~~ 84 (705)
.++.+++.+.++.|.+.|..+|. +.++++||.+.|+++|++++.+
T Consensus 7 ~~~~~~~~~~~~~l~~ips~s~~--e~~~~~~l~~~l~~~G~~~~~~ 51 (487)
T 2qyv_A 7 SLQPKLLWQWFDQICAIPHPSYK--EEQLAQFIINWAKTKGFFAERD 51 (487)
T ss_dssp CSSSHHHHHHHHHHHHSCCBTTC--CHHHHHHHHHHHHHTTCEEEEC
T ss_pred ccCHHHHHHHHHHHHcCCCCCCc--HHHHHHHHHHHHHHcCCEEEEc
Confidence 57788999999999999988875 5789999999999999987654
No 86
>3fx7_A Putative uncharacterized protein; double helix, unknown function; 1.65A {Helicobacter pylori} SCOP: a.25.5.1 PDB: 2gts_A
Probab=46.75 E-value=33 Score=28.89 Aligned_cols=79 Identities=13% Similarity=0.156 Sum_probs=44.7
Q ss_pred CCCCChhhHHHHHHHHHHHHHHhhhcC-----CCCchHHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccHHHHHHH
Q 005260 545 FLPFNYLSYAFELQKSTKDLENEVSGK-----GISLIPLFKSIEELAKAAAKIDNEKKELQKAKGWASTWKKDQYKVREL 619 (705)
Q Consensus 545 ~lP~d~~~y~~~l~~~~~~l~~~~~~~-----~~~~~~l~~a~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 619 (705)
+=|=....|+..|.++.+.|++...+- +++ +|=...-.+|...-+.+.+.++..... ....++-+
T Consensus 6 ~dpeElr~Fa~~L~~F~d~Lq~~~~~L~~~f~~L~-sWqDqkr~kFee~fe~l~s~l~~f~e~---------a~e~vp~L 75 (94)
T 3fx7_A 6 MDTEEVREFVGHLERFKELLREEVNSLSNHFHNLE-SWRDARRDKFSEVLDNLKSTFNEFDEA---------AQEQIAWL 75 (94)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-SCCSHHHHHHHHHHHHHHHHHHHHHHH---------HHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc-hHhhHHHHHHHHHHHHHHHHHHHHHHh---------hHHHhHHH
Confidence 345566778888888888888654321 233 333333344443333333333333221 24567788
Q ss_pred HHHHHHHHHhccCC
Q 005260 620 NDRLMMAERAFTDR 633 (705)
Q Consensus 620 N~~l~~~er~fl~~ 633 (705)
+.+|.-+|..++.-
T Consensus 76 ~~~i~vle~~~~~~ 89 (94)
T 3fx7_A 76 KERIRVLEEDYLEH 89 (94)
T ss_dssp HHHHHHHHHHHHC-
T ss_pred HHHHHHhHHHHHHh
Confidence 89999888887753
No 87
>1lfw_A PEPV; hydrolase, dipeptidase; HET: AEP; 1.80A {Bacteria} SCOP: c.56.5.4 d.58.19.1
Probab=44.51 E-value=24 Score=38.28 Aligned_cols=44 Identities=16% Similarity=0.111 Sum_probs=37.1
Q ss_pred ChhHHHHHHHHhhcCCCCCCCH----------hhHHHHHHHHHHHHHCCCceee
Q 005260 40 DNVSISHHLHTLTRRPHVAGSE----------ANAEAAAYVLSVFTSCSLESHI 83 (705)
Q Consensus 40 ~~~~i~~~L~~lss~~r~aGt~----------g~~~~a~~i~~~~~~~Gl~~~~ 83 (705)
..+++.+.++.|.+.|..++.+ +..++++||.+.++++|++++.
T Consensus 12 ~~~~~~~~l~~l~~ips~s~~~~~~~~~p~~~~~~~~~~~l~~~l~~~G~~~~~ 65 (470)
T 1lfw_A 12 KKDAILKDLEELIAIDSSEDLENATEEYPVGKGPVDAMTKFLSFAKRDGFDTEN 65 (470)
T ss_dssp THHHHHHHHHHHHTSCCBCCGGGCCSSSTTCHHHHHHHHHHHHHHHHTTCEEEE
T ss_pred hHHHHHHHHHHHcCCCCcCCCccccccCCCcHHHHHHHHHHHHHHHHcCCeEEE
Confidence 4567889999999998887754 5689999999999999998754
No 88
>3vta_A Cucumisin; subtilisin-like fold, serine protease, hydrolase; HET: DFP NAG FUC BMA MAN; 2.75A {Cucumis melo}
Probab=43.13 E-value=28 Score=39.64 Aligned_cols=35 Identities=23% Similarity=0.232 Sum_probs=28.5
Q ss_pred CCcccceEEEEEeCCCcchhHHHHHHHcCCeEEEEEec
Q 005260 165 VVNVTGTVVLARYGQIFRGDIVHNAFEAGAAGALIFTD 202 (705)
Q Consensus 165 gv~v~GkIvl~~~g~~~~~~k~~~A~~~GA~gvi~~~d 202 (705)
..+++|||++++.+ ...+...+...|+.|+|++..
T Consensus 277 ~~~v~gkivl~~~~---~~~~~~~~~~~Ga~gvi~~~~ 311 (621)
T 3vta_A 277 PNLLKGKIVVCEAS---FGPHEFFKSLDGAAGVLMTSN 311 (621)
T ss_dssp GGGTTTSEEECSSC---CCHHHHHHHHTTCSEEEEECS
T ss_pred cccccceEEEEecC---CChhHHhhhhcceeEEEEEec
Confidence 34699999999754 456788888999999999865
No 89
>3pfo_A Putative acetylornithine deacetylase; metal binding, merops M20A family, amino-acid biosynthesis, metallopeptidase; 1.90A {Rhodopseudomonas palustris}
Probab=43.08 E-value=20 Score=38.33 Aligned_cols=40 Identities=13% Similarity=0.179 Sum_probs=34.3
Q ss_pred hHHHHHHHHhhcCCCCCCCHhhHHHHHHHHHHHHHCCCceee
Q 005260 42 VSISHHLHTLTRRPHVAGSEANAEAAAYVLSVFTSCSLESHI 83 (705)
Q Consensus 42 ~~i~~~L~~lss~~r~aGt~g~~~~a~~i~~~~~~~Gl~~~~ 83 (705)
+++.+.++.|.+.|-.+|. +.++++||+++|+++|++++.
T Consensus 26 ~~~~~~l~~l~~~ps~s~~--e~~~~~~l~~~l~~~G~~~~~ 65 (433)
T 3pfo_A 26 NDQVAFLQRMVQFRSVRGE--EAPQQEWLAQQFADRGYKVDT 65 (433)
T ss_dssp HHHHHHHHHHHTSCCBTTC--CHHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHhcCCCCCCC--HHHHHHHHHHHHHHCCCceEE
Confidence 6688889999988877775 678999999999999998754
No 90
>3t68_A Succinyl-diaminopimelate desuccinylase; DAPE, csgid, metalloenzyme, structural genomics; 1.65A {Vibrio cholerae o1 biovar el tor} PDB: 3t6m_A
Probab=42.54 E-value=17 Score=36.40 Aligned_cols=45 Identities=11% Similarity=0.154 Sum_probs=35.5
Q ss_pred CChhHHHHHHHHhhcCCCCCCCHhhHHHHHHHHHHHHHCCCceeeeE
Q 005260 39 SDNVSISHHLHTLTRRPHVAGSEANAEAAAYVLSVFTSCSLESHIAS 85 (705)
Q Consensus 39 i~~~~i~~~L~~lss~~r~aGt~g~~~~a~~i~~~~~~~Gl~~~~~~ 85 (705)
.+.+++.+.++.|.+.|-.++. +..+++||++.|+++|++++..+
T Consensus 3 ~~~~~~~~~l~~lv~ips~s~~--e~~~~~~l~~~l~~~G~~~~~~~ 47 (268)
T 3t68_A 3 ATDSPVLALAKELISRQSVTPA--DAGCQDLMIERLKALGFEIESMV 47 (268)
T ss_dssp -CCCHHHHHHHHHHTSCCBTTC--CTTHHHHHHHHHHHTTCEECCCE
T ss_pred ccHHHHHHHHHHHhCCCCCCCC--chHHHHHHHHHHHHCCCeEEEEe
Confidence 3457788899999988877665 45689999999999999876543
No 91
>1z2l_A Allantoate amidohydrolase; ALLC, purine cataboli allantoin utilization, structural genomics, PSI, Pro structure initiative; HET: 1AL; 2.25A {Escherichia coli} SCOP: c.56.5.4 d.58.19.1 PDB: 2imo_A
Probab=42.09 E-value=26 Score=37.34 Aligned_cols=45 Identities=16% Similarity=0.014 Sum_probs=35.9
Q ss_pred ChhHHHHHHHHhhcCCCCC--------CCHhhHHHHHHHHHHHHHCCCceeee
Q 005260 40 DNVSISHHLHTLTRRPHVA--------GSEANAEAAAYVLSVFTSCSLESHIA 84 (705)
Q Consensus 40 ~~~~i~~~L~~lss~~r~a--------Gt~g~~~~a~~i~~~~~~~Gl~~~~~ 84 (705)
+.+++.+.|+.|.+.+..+ -|.++.++++||++.|+++|++++.+
T Consensus 7 ~~~~~~~~l~~lv~i~s~s~~g~~~~~~s~~e~~~~~~i~~~l~~~G~~v~~~ 59 (423)
T 1z2l_A 7 FRQAIEETLPWLSSFGADPAGGMTRLLYSPEWLETQQQFKKRMAASGLETRFD 59 (423)
T ss_dssp HHHHHHHHHHHHHHTTBCTTSSBCCCTTSHHHHHHHHHHHHHHHHTTCEEEEC
T ss_pred cHHHHHHHHHHHHhcCCCCCCCcccCcCCHHHHHHHHHHHHHHHHcCCEEEEe
Confidence 3567888899998876443 34788999999999999999987654
No 92
>3dlj_A Beta-Ala-His dipeptidase; CNDP1, carnosine dipeptidase 1, structural genomics, structu genomics consortium, SGC, metallopeptidase M20 family; 2.26A {Homo sapiens}
Probab=41.20 E-value=43 Score=36.49 Aligned_cols=45 Identities=4% Similarity=-0.116 Sum_probs=37.3
Q ss_pred ChhHHHHHHHHhhcCCCC--CCCH----hhHHHHHHHHHHHHHCCCceeee
Q 005260 40 DNVSISHHLHTLTRRPHV--AGSE----ANAEAAAYVLSVFTSCSLESHIA 84 (705)
Q Consensus 40 ~~~~i~~~L~~lss~~r~--aGt~----g~~~~a~~i~~~~~~~Gl~~~~~ 84 (705)
..+++.+.++.|.+.|-. ++.+ +..++++||+++|+++|++++..
T Consensus 23 ~~~~~i~~l~~lv~ips~~~s~~~~~~~~~~~~~~~l~~~l~~~G~~~~~~ 73 (485)
T 3dlj_A 23 HQDEFVQTLKEWVAIESDSVQPVPRFRQELFRMMAVAADTLQRLGARVASV 73 (485)
T ss_dssp THHHHHHHHHHHHTSCCBSSSCCHHHHHHHHHHHHHHHHHHHHTTCEEEEE
T ss_pred hHHHHHHHHHHHhcCCCccCCCCccccHHHHHHHHHHHHHHHHcCCeEEEE
Confidence 457788999999999888 7764 35789999999999999987654
No 93
>2rb7_A Peptidase, M20/M25/M40 family; YP_387682.1, CO-catalytic metallopeptidase, peptidase family M20/M25/M40, structural genomics; HET: MSE PGE PG4; 1.60A {Desulfovibrio desulfuricans subsp}
Probab=38.96 E-value=37 Score=35.45 Aligned_cols=45 Identities=11% Similarity=0.153 Sum_probs=36.4
Q ss_pred hhHHHHHHHHhhcCCCCCCCH-hhHHHHHHHHHHHHHCCCceeeeE
Q 005260 41 NVSISHHLHTLTRRPHVAGSE-ANAEAAAYVLSVFTSCSLESHIAS 85 (705)
Q Consensus 41 ~~~i~~~L~~lss~~r~aGt~-g~~~~a~~i~~~~~~~Gl~~~~~~ 85 (705)
.+++.+.++.|.+.|-.+..+ ++.++++||.+.|+++|++++...
T Consensus 5 ~~~~~~~l~~l~~ips~s~~~~~e~~~~~~l~~~l~~~G~~~~~~~ 50 (364)
T 2rb7_A 5 MQHIVELTSDLIRFPSMHSRPEQISRCAGFIMDWCAQNGIHAERMD 50 (364)
T ss_dssp HHHHHHHHHHHHTSCCCTTCHHHHHHHHHHHHHHHHHTTCCCEEEE
T ss_pred HHHHHHHHHHHHcCCCCCCCcchHHHHHHHHHHHHHHcCCeEEEec
Confidence 456788899999988777554 466889999999999999986543
No 94
>1xmb_A IAA-amino acid hydrolase homolog 2; structural genomics, protein structure initiative, CESG AT5G56660, ILL2, indole-3-acetic acid, auxin; 2.00A {Arabidopsis thaliana} SCOP: c.56.5.4 d.58.19.1 PDB: 2q43_A
Probab=38.05 E-value=42 Score=35.77 Aligned_cols=50 Identities=10% Similarity=0.041 Sum_probs=39.6
Q ss_pred hHHHHHHHHhhcCCCCCCCHhhHHHHHHHHHHHHHCCCceeeeE--EEEEEeee
Q 005260 42 VSISHHLHTLTRRPHVAGSEANAEAAAYVLSVFTSCSLESHIAS--YGVSLTYP 93 (705)
Q Consensus 42 ~~i~~~L~~lss~~r~aGt~g~~~~a~~i~~~~~~~Gl~~~~~~--y~v~~~~P 93 (705)
+++.+.++.|.+.|..+|. +.++++||.+.|+++|++++... ..++..++
T Consensus 28 ~~~i~~~~~l~~ips~s~~--e~~~~~~l~~~l~~~G~~v~~~~~~~~l~a~~~ 79 (418)
T 1xmb_A 28 DWMVKIRRKIHENPELGYE--ELETSKLIRSELELIGIKYRYPVAITGVIGYIG 79 (418)
T ss_dssp HHHHHHHHHHHHSCCCTTC--CHHHHHHHHHHHHHHTCCEEEEETTTEEEEEEE
T ss_pred HHHHHHHHHHHhCCCCCCC--hHHHHHHHHHHHHHcCCeeEeccCCcEEEEEEc
Confidence 6788889999999988875 78899999999999999986543 34444444
No 95
>3ct9_A Acetylornithine deacetylase; NP_812461.1, A putative zinc peptidase, peptidase family M20 structural genomics; 2.31A {Bacteroides thetaiotaomicron vpi-5482}
Probab=37.33 E-value=41 Score=34.95 Aligned_cols=41 Identities=12% Similarity=0.230 Sum_probs=34.4
Q ss_pred hHHHHHHHHhhcCCCCCCCHhhHHHHHHHHHHHHHCCCceeee
Q 005260 42 VSISHHLHTLTRRPHVAGSEANAEAAAYVLSVFTSCSLESHIA 84 (705)
Q Consensus 42 ~~i~~~L~~lss~~r~aGt~g~~~~a~~i~~~~~~~Gl~~~~~ 84 (705)
+++.+.++.|.+.|-.+|. +.++++||.+.|+++|++++..
T Consensus 11 ~~~~~~~~~l~~~ps~s~~--e~~~~~~l~~~l~~~g~~~~~~ 51 (356)
T 3ct9_A 11 AEAVSLLKSLISIPSISRE--ETQAADFLQNYIEAEGMQTGRK 51 (356)
T ss_dssp HHHHHHHHHHHTSCCBTTC--CHHHHHHHHHHHHHTTCCEEEE
T ss_pred HHHHHHHHHHhcCCCCCCC--hHHHHHHHHHHHHHCCCeEEEE
Confidence 4577888999998888875 5688999999999999987654
No 96
>3c8o_A Regulator of ribonuclease activity A; RRAA, PAO1, RNAse E regulater, hydrolase regulator; HET: PGE PG4; 1.90A {Pseudomonas aeruginosa}
Probab=37.19 E-value=1.2e+02 Score=28.12 Aligned_cols=66 Identities=18% Similarity=0.323 Sum_probs=43.6
Q ss_pred cccCCCCcceEEeEEEecCCChhchHHHH-hcCCcccceEEEEEeCC-----CcchhHHHHHHHcCCeEEEEEe
Q 005260 134 FHGYAKSGTVIGPVVYVNYGRVEDYVTLK-EMVVNVTGTVVLARYGQ-----IFRGDIVHNAFEAGAAGALIFT 201 (705)
Q Consensus 134 ~~a~S~~G~v~g~lVyv~~G~~~D~~~L~-~~gv~v~GkIvl~~~g~-----~~~~~k~~~A~~~GA~gvi~~~ 201 (705)
+.+|.+...+-|+.+=+-+. +|-..+. .....-.|+|+++..++ ++-+.....|+++|++|+|+.-
T Consensus 23 ~~~~~~~~~~~G~A~Tv~~~--~dn~~~~~al~~~~~G~VlVvd~~g~~~~a~~G~~la~~a~~~G~~GiVidG 94 (162)
T 3c8o_A 23 FSNFGGRDSFGGEIVTIKCF--EDNSLVKEQVDKDGKGKVLVVDGGGSLRRALLGDMLAEKAAKNGWEGIVVYG 94 (162)
T ss_dssp CEECSSCSCEEEEEEEEECS--SCCHHHHHHHTSCCBTEEEEEECTTCSSSBSCCHHHHHHHHHTTBCEEEEEE
T ss_pred cccCCCCCEEEEEEEEEEEe--CCchHHHHHHhccCCCCEEEEECCCCCCccchHHHHHHHHHHCCCeEEEecC
Confidence 44555556778888877654 2211221 22345689999999654 2234567899999999999875
No 97
>1q5x_A Regulator of RNAse E activity A; 3-layer sandwich, alpha-beta structure, parallel beta sheet, antiparallel beta sheet, hydrolase inhibitor; 2.00A {Escherichia coli} SCOP: c.8.7.1
Probab=36.68 E-value=1e+02 Score=28.44 Aligned_cols=66 Identities=20% Similarity=0.257 Sum_probs=44.0
Q ss_pred cccCCCCcceEEeEEEecCCChhchHHHH-hcCCcccceEEEEEeCCC-----cchhHHHHHHHcCCeEEEEEe
Q 005260 134 FHGYAKSGTVIGPVVYVNYGRVEDYVTLK-EMVVNVTGTVVLARYGQI-----FRGDIVHNAFEAGAAGALIFT 201 (705)
Q Consensus 134 ~~a~S~~G~v~g~lVyv~~G~~~D~~~L~-~~gv~v~GkIvl~~~g~~-----~~~~k~~~A~~~GA~gvi~~~ 201 (705)
+.++++...+-|+.+=+-+. +|-..+. .....-.|+|+++..++. +-+.....|+++|++|+|+.-
T Consensus 23 i~~~~~~~~~~G~A~Tv~~~--~dn~~~~~al~~~~~G~VlVvd~~g~~~~a~~G~~la~~a~~~G~~G~VidG 94 (161)
T 1q5x_A 23 FSNFGGRASFGGQIITVKCF--EDNGLLYDLLEQNGRGRVLVVDGGGSVRRALVDAELARLAVQNEWEGLVIYG 94 (161)
T ss_dssp CEECSSCSSEEEEEEEEECS--SBCHHHHHHHTSCCTTEEEEEECTTCSSSEEECHHHHHHHHHTTCCEEEEEE
T ss_pred ceECCCCCEEEEEEEEEEEe--CCcHHHHHHHhhcCCCCEEEEECCCCCCceeehHHHHHHHHHCCCeEEEecC
Confidence 34455555677887777664 3322222 234567899999996542 224567899999999999875
No 98
>2pok_A Peptidase, M20/M25/M40 family; M20 family peptidase, metallo protein, MCSG, structural GENO PSI-2, protein structure initiative; HET: BGC; 1.90A {Streptococcus pneumoniae}
Probab=36.31 E-value=40 Score=36.67 Aligned_cols=45 Identities=22% Similarity=0.217 Sum_probs=37.3
Q ss_pred hh-HHHHHHHHhhcCCCCCCC-HhhHHHHHHHHHHHHHCCCceeeeE
Q 005260 41 NV-SISHHLHTLTRRPHVAGS-EANAEAAAYVLSVFTSCSLESHIAS 85 (705)
Q Consensus 41 ~~-~i~~~L~~lss~~r~aGt-~g~~~~a~~i~~~~~~~Gl~~~~~~ 85 (705)
.+ ++.+.++.|.+.|..++. ++..++++||++.|+++|++++..+
T Consensus 42 ~~~~~~~~l~~l~~ips~s~~e~~~~~~~~~l~~~l~~~G~~~~~~~ 88 (481)
T 2pok_A 42 VAQHYFEVLRTLISKKSVFAQQVGLKEVANYLGEIFKRVGAEVEIDE 88 (481)
T ss_dssp HHHHHHHHHHHHHHSCCCGGGCTTHHHHHHHHHHHHHHTTCEEEEEC
T ss_pred hhHHHHHHHHHHHcCCCcCCCCHHHHHHHHHHHHHHHHcCCEEEEec
Confidence 45 788899999999887774 3568999999999999999876643
No 99
>1fno_A Peptidase T; metallo peptidase, protease, hydrolase; 2.40A {Salmonella typhimurium} SCOP: c.56.5.4 d.58.19.1 PDB: 1vix_A
Probab=35.67 E-value=24 Score=37.63 Aligned_cols=51 Identities=8% Similarity=0.041 Sum_probs=36.3
Q ss_pred HHHHHHHHhhcCCCCCC--------CHhhHHHHHHHHHHHHHCCCc-eeeeE-EEEEEeee
Q 005260 43 SISHHLHTLTRRPHVAG--------SEANAEAAAYVLSVFTSCSLE-SHIAS-YGVSLTYP 93 (705)
Q Consensus 43 ~i~~~L~~lss~~r~aG--------t~g~~~~a~~i~~~~~~~Gl~-~~~~~-y~v~~~~P 93 (705)
++.+.|+.|.+.+-.+| ++++.++++||++.|+++|++ ++.+. ..++..++
T Consensus 3 ~~~~~l~~Lv~i~s~s~~~~~~~p~~~~e~~~~~~l~~~l~~~G~~~~~~~~~~nvia~~~ 63 (417)
T 1fno_A 3 KLLERFLHYVSLDTQSKSGVRQVPSTEGQWKLLRLLKQQLEEMGLVNITLSEKGTLMATLP 63 (417)
T ss_dssp SHHHHHHHHHTSCCBCCSSCSSSSSSHHHHHHHHHHHHHHHHHTCEEEEECTTCCEEEEEC
T ss_pred HHHHHHHHhEEecCCCCcccCCCCCCccHHHHHHHHHHHHHHcCCCeEEECCCceEEEEEC
Confidence 46677788887665444 558899999999999999998 65543 33444443
No 100
>3isx_A Endoglucanase; TM1050, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2, hydrolase; HET: MSE; 1.40A {Thermotoga maritima}
Probab=35.09 E-value=17 Score=38.24 Aligned_cols=42 Identities=14% Similarity=0.160 Sum_probs=36.4
Q ss_pred HHHHHHHHhhcCCCCCCCHhhHHHHHHHHHHHHHCCCceeeeEE
Q 005260 43 SISHHLHTLTRRPHVAGSEANAEAAAYVLSVFTSCSLESHIASY 86 (705)
Q Consensus 43 ~i~~~L~~lss~~r~aGt~g~~~~a~~i~~~~~~~Gl~~~~~~y 86 (705)
.+++.|+.|++.|..+|- +.+.++|+++.++++|++++.+++
T Consensus 12 ~~~~~l~~L~~~pspSG~--E~~v~~~i~~~l~~~~~e~~~D~~ 53 (343)
T 3isx_A 12 HMKELIRKLTEAFGPSGR--EEEVRSIILEELEGHIDGHRIDGL 53 (343)
T ss_dssp CCHHHHHHHHHSCCBTTC--CHHHHHHHHHHHTTTCSEEEECTT
T ss_pred HHHHHHHHHHhCCCCCCc--hHHHHHHHHHHHHHhCCEEEECCC
Confidence 467889999999999998 678889999999999988877653
No 101
>1vi4_A Regulator of ribonuclease acivity A protein 1; structural genomics, unknown function; 1.87A {Vibrio cholerae} SCOP: c.8.7.1
Probab=34.03 E-value=1.2e+02 Score=28.52 Aligned_cols=66 Identities=15% Similarity=0.249 Sum_probs=43.6
Q ss_pred cccCCCCcceEEeEEEecCCChhchHHHH-hcCCcccceEEEEEeCCC-----cchhHHHHHHHcCCeEEEEEe
Q 005260 134 FHGYAKSGTVIGPVVYVNYGRVEDYVTLK-EMVVNVTGTVVLARYGQI-----FRGDIVHNAFEAGAAGALIFT 201 (705)
Q Consensus 134 ~~a~S~~G~v~g~lVyv~~G~~~D~~~L~-~~gv~v~GkIvl~~~g~~-----~~~~k~~~A~~~GA~gvi~~~ 201 (705)
+.++.+...+-|+.+=|-+- +|-..+. .....-.|+|+++..++. +-+.....|+++|++|+|+.-
T Consensus 26 ~~~~~~~~~~~G~A~Tv~~~--~dn~~~~~al~~~~~G~VlVvd~~g~~~~A~~G~~la~~a~~~G~aGiVidG 97 (174)
T 1vi4_A 26 LQNFGQRSAFWGEIVTVRCY--HDNSKVRDVLSQNGKGKVLVVDGHGSCHKALMGDQLAILAIKNDWEGVIIYG 97 (174)
T ss_dssp CEECSSCSCEEEEEEEEECS--SCCHHHHHHHTSCCTTEEEEEECTTCCSSEEECHHHHHHHHHTTCCEEEEEE
T ss_pred ceECCCCCEEEEEEEEEEEe--CccHHHHHHHhccCCCEEEEEECCCCCCceehHHHHHHHHHHCCCeEEEecc
Confidence 44555556777887777654 2322221 224457899999996542 224567899999999999875
No 102
>3ram_A HMRA protein; two-domain, catalytic (alpha-beta-alpha) motif, tetramerisat (alpha,beta,BETA,alpha), endoprotease, hydrolase; 2.70A {Staphylococcus aureus}
Probab=34.02 E-value=44 Score=35.34 Aligned_cols=42 Identities=14% Similarity=0.202 Sum_probs=34.6
Q ss_pred hhHHHHHHHHhhcCCCCCCCHhhHHHHHHHHHHHHHCCCceeee
Q 005260 41 NVSISHHLHTLTRRPHVAGSEANAEAAAYVLSVFTSCSLESHIA 84 (705)
Q Consensus 41 ~~~i~~~L~~lss~~r~aGt~g~~~~a~~i~~~~~~~Gl~~~~~ 84 (705)
.+++.+.+++|-+.|-+++. +.++++||.+.|+++|++++..
T Consensus 15 ~~~~~~~~~~l~~~pe~s~~--E~~~~~~i~~~l~~~G~~v~~~ 56 (394)
T 3ram_A 15 KYSYIEISHRIHERPELGNE--EIFASRTLIDRLKEHDFEIETE 56 (394)
T ss_dssp HHHHHHHHHHHHHSCCCTTC--CHHHHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHHHHHhCCCCCcc--hHHHHHHHHHHHHHcCCeEEeC
Confidence 45677888888888877664 7899999999999999997654
No 103
>1ysj_A Protein YXEP; M20 family peptidase, dinuclear metal binding, structural GE PSI, protein structure initiative; 2.40A {Bacillus subtilis} SCOP: c.56.5.4 d.58.19.1
Probab=33.88 E-value=31 Score=36.59 Aligned_cols=41 Identities=10% Similarity=0.079 Sum_probs=33.8
Q ss_pred hHHHHHHHHhhcCCCCCCCHhhHHHHHHHHHHHHHCCCceeee
Q 005260 42 VSISHHLHTLTRRPHVAGSEANAEAAAYVLSVFTSCSLESHIA 84 (705)
Q Consensus 42 ~~i~~~L~~lss~~r~aGt~g~~~~a~~i~~~~~~~Gl~~~~~ 84 (705)
+++.+.++.|.+.|..+|. +.++++||.+.|+++|++++.+
T Consensus 32 ~~~i~~~~~l~~ips~s~~--e~~~~~~l~~~l~~~G~~v~~~ 72 (404)
T 1ysj_A 32 TRLINMRRDLHEHPELSFQ--EVETTKKIRRWLEEEQIEILDV 72 (404)
T ss_dssp HHHHHHHHHHHHSCCCTTC--CHHHHHHHHHHHHHTTCEECCC
T ss_pred HHHHHHHHHHHhcCCCCCC--hHHHHHHHHHHHHHcCCceEEe
Confidence 4567778888888888775 6789999999999999987544
No 104
>3kl9_A PEPA, glutamyl aminopeptidase; tetrahedral aminopeptidase, S specificity, metallopeptidase M42, hydrolas; 2.70A {Streptococcus pneumoniae}
Probab=32.91 E-value=27 Score=36.76 Aligned_cols=49 Identities=18% Similarity=0.180 Sum_probs=38.7
Q ss_pred HHHHHHHHhhcCCCCCCCHhhHHHHHHHHHHHHHCCCceeeeEE-EEEEeee
Q 005260 43 SISHHLHTLTRRPHVAGSEANAEAAAYVLSVFTSCSLESHIASY-GVSLTYP 93 (705)
Q Consensus 43 ~i~~~L~~lss~~r~aGt~g~~~~a~~i~~~~~~~Gl~~~~~~y-~v~~~~P 93 (705)
++.+.|+.|++.|..+|. +.+.++|+++.++++|++++.+.+ .++...+
T Consensus 4 ~~~~~l~~L~~ips~SG~--E~~v~~~l~~~l~~~g~~~~~D~~GNli~~~~ 53 (355)
T 3kl9_A 4 TLFSKIKEVTELAAVSGH--EAPVRAYLREKLTPHVDEVVTDGLGGIFGIKH 53 (355)
T ss_dssp HHHHHHHHHHTSCCBTTC--CHHHHHHHHHHHGGGSSEEEECTTSCEEEEEC
T ss_pred HHHHHHHHHHhCCCCCCC--HHHHHHHHHHHHHHhCCEEEECCCCeEEEEEC
Confidence 466889999999999997 578899999999999998876543 3444443
No 105
>2gre_A Deblocking aminopeptidase; structural genomi protein structure initiative, midwest center for structural genomics, MCSG, hydrolase; 2.65A {Bacillus cereus} SCOP: b.49.3.1 c.56.5.4
Probab=31.85 E-value=30 Score=36.07 Aligned_cols=44 Identities=11% Similarity=0.218 Sum_probs=36.8
Q ss_pred CChhHHHHHHHHhhcCCCCCCCHhhHHHHHHHHHHHHHCCCceeee
Q 005260 39 SDNVSISHHLHTLTRRPHVAGSEANAEAAAYVLSVFTSCSLESHIA 84 (705)
Q Consensus 39 i~~~~i~~~L~~lss~~r~aGt~g~~~~a~~i~~~~~~~Gl~~~~~ 84 (705)
++.+++.+.|+.|.+.+-.+|. +.++++|+++.|+++|++++.+
T Consensus 3 ~~~~~~~~~l~~lv~i~s~s~~--e~~~~~~l~~~l~~~g~~~~~d 46 (349)
T 2gre_A 3 HHTKETMELIKELVSIPSPSGN--TAKIINFIENYVSEWNVETKRN 46 (349)
T ss_dssp CHHHHHHHHHHHHHTSCCBTTC--CHHHHHHHHHHTTTSSSEEEEC
T ss_pred ccHHHHHHHHHHHHhCCCCCcc--HHHHHHHHHHHHHHhCCEEEEe
Confidence 4567888999999999888776 4578999999999999987654
No 106
>1j3l_A Demethylmenaquinone methyltransferase; vitamine K2, structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.30A {Thermus thermophilus} SCOP: c.8.7.1
Probab=30.29 E-value=1.7e+02 Score=26.99 Aligned_cols=66 Identities=21% Similarity=0.380 Sum_probs=42.3
Q ss_pred cccCCCCcceEEeEEEecCCChhchHHHH-hcCCcccceEEEEEeCC-----CcchhHHHHHHHcCCeEEEEEe
Q 005260 134 FHGYAKSGTVIGPVVYVNYGRVEDYVTLK-EMVVNVTGTVVLARYGQ-----IFRGDIVHNAFEAGAAGALIFT 201 (705)
Q Consensus 134 ~~a~S~~G~v~g~lVyv~~G~~~D~~~L~-~~gv~v~GkIvl~~~g~-----~~~~~k~~~A~~~GA~gvi~~~ 201 (705)
+.++.+...+-|+.+=+-+. +|-..+. .....-.|+|+++..++ ++-+.....|+++|++|+|+.-
T Consensus 22 ~~~~~~~~~~~G~A~Tv~~~--~dn~~~~~al~~~~~G~VlVvd~~g~~~~a~~G~~la~~a~~~G~~GiVidG 93 (164)
T 1j3l_A 22 FKSFGGRARFAGRVRTLRVF--EDNALVRKVLEEEGAGQVLFVDGGGSLRTALLGGNLARRAWEKGWAGVVVHG 93 (164)
T ss_dssp SEECSSBSSEEEEEEEEECS--SBCHHHHHHHTSCCBTEEEEEECTTCCSSBSCCHHHHHHHHHTTBCEEEEES
T ss_pred eeeCCCCCEEEEEEEEEEee--CCchHHHHHHhccCCCcEEEEECCCCCCceeehHHHHHHHHHCCCeEEEecC
Confidence 34455555677887777653 2211111 22345689999999654 2334577999999999999874
No 107
>1vgy_A Succinyl-diaminopimelate desuccinylase; structural genomics, unknown function; HET: MSE; 1.90A {Neisseria meningitidis} SCOP: c.56.5.4 d.58.19.1
Probab=30.23 E-value=31 Score=36.32 Aligned_cols=43 Identities=9% Similarity=0.125 Sum_probs=35.7
Q ss_pred CChhHHHHHHHHhhcCCCCCCCHhhHHHHHHHHHHHHHCCCceee
Q 005260 39 SDNVSISHHLHTLTRRPHVAGSEANAEAAAYVLSVFTSCSLESHI 83 (705)
Q Consensus 39 i~~~~i~~~L~~lss~~r~aGt~g~~~~a~~i~~~~~~~Gl~~~~ 83 (705)
++.+++.+.++.|.+.|-.++. +.++++||.+.|+++|++++.
T Consensus 3 l~~~~~~~~l~~lv~~ps~s~~--e~~~~~~l~~~l~~~G~~~~~ 45 (393)
T 1vgy_A 3 LTETQSLELAKELISRPSVTPD--DRDCQKLMAERLHKIGFAAEE 45 (393)
T ss_dssp -CCSHHHHHHHHHHTSCCBTTC--CTTHHHHHHHHHHTTTCEEEE
T ss_pred CchHHHHHHHHHHhcCCCCCCC--cHHHHHHHHHHHHHcCCcEEE
Confidence 5677899999999998877764 567899999999999998765
No 108
>1vhe_A Aminopeptidase/glucanase homolog; structural genomics, unknown function; HET: MSE; 1.90A {Bacillus subtilis} SCOP: b.49.3.1 c.56.5.4
Probab=29.38 E-value=39 Score=35.50 Aligned_cols=43 Identities=16% Similarity=0.090 Sum_probs=35.9
Q ss_pred ChhHHHHHHHHhhcCCCCCCCHhhHHHHHHHHHHHHHCCCceeee
Q 005260 40 DNVSISHHLHTLTRRPHVAGSEANAEAAAYVLSVFTSCSLESHIA 84 (705)
Q Consensus 40 ~~~~i~~~L~~lss~~r~aGt~g~~~~a~~i~~~~~~~Gl~~~~~ 84 (705)
..+++.+.|+.|.+.+..+|. +.+.++||++.|+++|++++.+
T Consensus 5 ~~~~~~~~l~~L~~~~s~sg~--e~~~~~~l~~~l~~~g~~~~~d 47 (373)
T 1vhe_A 5 KLDETLTMLKDLTDAKGIPGN--EREVRQVMKSYIEPFADEVTTD 47 (373)
T ss_dssp CCCHHHHHHHHHHHSCCCTTC--CHHHHHHHHHHHGGGCSEEEEC
T ss_pred HHHHHHHHHHHHHcCCCCCCc--hHHHHHHHHHHHHhhCCEEEEc
Confidence 345688899999999988886 4688999999999999987654
No 109
>4h2k_A Succinyl-diaminopimelate desuccinylase; DAPE, MCSG, PSI-biology, structural genomics, midwest center structural genomics, hydrolase; 1.84A {Haemophilus influenzae}
Probab=29.18 E-value=37 Score=33.83 Aligned_cols=40 Identities=10% Similarity=0.214 Sum_probs=31.1
Q ss_pred HHHHHHHHhhcCCCCCCCHhhHHHHHHHHHHHHHCCCceeee
Q 005260 43 SISHHLHTLTRRPHVAGSEANAEAAAYVLSVFTSCSLESHIA 84 (705)
Q Consensus 43 ~i~~~L~~lss~~r~aGt~g~~~~a~~i~~~~~~~Gl~~~~~ 84 (705)
++.+.++.|-+.|-.++. +..+++||.+.|+++|++++..
T Consensus 7 ~~~~~l~~lv~ips~s~~--e~~~~~~l~~~l~~~G~~~~~~ 46 (269)
T 4h2k_A 7 KVVSLAQDLIRRPSISPN--DEGCQQIIAERLEKLGFQIEWM 46 (269)
T ss_dssp HHHHHHHHHHTSCCBTTC--CTTHHHHHHHHHHTTTCEEEEC
T ss_pred HHHHHHHHHhCCCCCCCC--cHHHHHHHHHHHHHcCCeEEEE
Confidence 566778888877765554 5568999999999999987654
No 110
>1nxj_A Probable S-adenosylmethionine:2- demethylmenaquinone methyltransferase; beta/BETA/alpha domain, structural genomics, PSI; HET: TLA; 1.90A {Mycobacterium tuberculosis} SCOP: c.8.7.1
Probab=27.30 E-value=1.3e+02 Score=28.37 Aligned_cols=66 Identities=20% Similarity=0.243 Sum_probs=42.7
Q ss_pred cccCCCCcceEEeEEEecCCChhchHHHH-hcCCcccceEEEEEeCCC-----cchhHHHHHHHcCCeEEEEEe
Q 005260 134 FHGYAKSGTVIGPVVYVNYGRVEDYVTLK-EMVVNVTGTVVLARYGQI-----FRGDIVHNAFEAGAAGALIFT 201 (705)
Q Consensus 134 ~~a~S~~G~v~g~lVyv~~G~~~D~~~L~-~~gv~v~GkIvl~~~g~~-----~~~~k~~~A~~~GA~gvi~~~ 201 (705)
+.++.+...+-|+.+=|-+. +|-..+. .....-.|+|+++..++. +-+.....|+++|++|+|+..
T Consensus 52 i~~~~~~~~~~G~A~TV~~~--~dn~~~~~al~~~~~G~VlVvd~~g~~~~A~~G~~la~~a~~~G~aGiVidG 123 (183)
T 1nxj_A 52 FRQFGGRSQFAGPISTVRCF--QDNALLKSVLSQPSAGGVLVIDGAGSLHTALVGDVIAELARSTGWTGLIVHG 123 (183)
T ss_dssp CEECSSBSCEEEEEEEEECS--SBCHHHHHHHHSCCSSCEEEEECTTCCSSEEECHHHHHHHHHHTCCEEEEEE
T ss_pred eeECCCCCEEEEEEEEEEEe--CCchHHHHHHHhcCCCCEEEEECCCCCCceeeHHHHHHHHHHCCCcEEEecc
Confidence 44455555677888777653 2211111 123457899999996542 224567899999999999875
No 111
>2wzn_A TET3, 354AA long hypothetical operon protein FRV; protease, hydrolase, thermophilic, SELF-compartmentalising; 1.90A {Pyrococcus horikoshii} PDB: 2pe3_A
Probab=26.62 E-value=42 Score=33.43 Aligned_cols=40 Identities=18% Similarity=0.293 Sum_probs=30.3
Q ss_pred HHHHHhhcCCCCCCCHhhHHHHHHHHHHHHHCCCceeeeEE
Q 005260 46 HHLHTLTRRPHVAGSEANAEAAAYVLSVFTSCSLESHIASY 86 (705)
Q Consensus 46 ~~L~~lss~~r~aGt~g~~~~a~~i~~~~~~~Gl~~~~~~y 86 (705)
+.|+.|.+.|=.+|.+ +.+.++||++.|+++|++++.+++
T Consensus 13 elL~~Lv~ipS~sg~E-~~~v~~~l~~~l~~~G~~v~~D~~ 52 (354)
T 2wzn_A 13 KLMQEIIEAPGVSGYE-HLGIRDIVVDVLKEVADEVKVDKL 52 (354)
T ss_dssp HHHHHHHHSCCBTTCG-GGTHHHHHHHHHHTTSSEEEECTT
T ss_pred HHHHHHhcCCCCCcch-HHHHHHHHHHHHHHcCCEEEEeCC
Confidence 4677777777666643 345789999999999999877654
No 112
>3isz_A Succinyl-diaminopimelate desuccinylase; DAPE, Zn-binding, metallopeptidase, structural genomics, PSI-2, protein struc initiative; 2.00A {Haemophilus influenzae} PDB: 3ic1_A
Probab=25.96 E-value=47 Score=34.43 Aligned_cols=40 Identities=10% Similarity=0.204 Sum_probs=32.9
Q ss_pred hHHHHHHHHhhcCCCCCCCHhhHHHHHHHHHHHHHCCCceee
Q 005260 42 VSISHHLHTLTRRPHVAGSEANAEAAAYVLSVFTSCSLESHI 83 (705)
Q Consensus 42 ~~i~~~L~~lss~~r~aGt~g~~~~a~~i~~~~~~~Gl~~~~ 83 (705)
+++.+.++.|.+.|-.+|. +.++++||++.|+++|++++.
T Consensus 3 ~~~~~~~~~L~~~ps~s~~--e~~~~~~l~~~l~~~g~~~~~ 42 (377)
T 3isz_A 3 EKVVSLAQDLIRRPSISPN--DEGCQQIIAERLEKLGFQIEW 42 (377)
T ss_dssp HHHHHHHHHHHTSCCBTTC--CTTHHHHHHHHHHHTTCEEEE
T ss_pred hHHHHHHHHHhcCCCCCCC--hhhHHHHHHHHHHHCCCceEE
Confidence 4577888999988777665 557899999999999999764
No 113
>3noj_A 4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloac decarboxylase; class II aldolase, A-B-B-A sandwich, metalloprotein, lyase; HET: PG4; 1.82A {Pseudomonas putida}
Probab=25.63 E-value=2.1e+02 Score=28.12 Aligned_cols=66 Identities=12% Similarity=0.108 Sum_probs=40.5
Q ss_pred ccCCCCcceEEeEEEecCCChhchHHH-HhcCCcccceEEEEEeCC-----CcchhHHHHHHHcCCeEEEEEe
Q 005260 135 HGYAKSGTVIGPVVYVNYGRVEDYVTL-KEMVVNVTGTVVLARYGQ-----IFRGDIVHNAFEAGAAGALIFT 201 (705)
Q Consensus 135 ~a~S~~G~v~g~lVyv~~G~~~D~~~L-~~~gv~v~GkIvl~~~g~-----~~~~~k~~~A~~~GA~gvi~~~ 201 (705)
.++.+...+-|+.+=|-+- +.|-..+ +.....-.|.|+++..++ ++-+.....|+.+|++|+|+..
T Consensus 49 ~p~~~~~~~~G~A~TV~~~-p~dn~~~~~ai~~~~~G~VlVvd~~g~~~~A~~G~~la~~a~~~G~aGiVidG 120 (238)
T 3noj_A 49 RPIQQGTSLAGSAVTVLVA-PGDNWMFHVAVEQCRPGDVLVVSPSSPCTDGYFGDLLATSLQARGVRALIVDA 120 (238)
T ss_dssp EESSSSCCEEEEEEEEEEC-TTBCHHHHHHHTTCCTTEEEEEEESSCCCSBCCCHHHHHHHHHTTCCEEEEEE
T ss_pred eECCCCCeEEEEEEEEEEE-CCCcHHHHHHHHhcCCCCEEEEECCCCCCeEehHHHHHHHHHHCCCcEEEeec
Confidence 3444555667776655442 1221111 112334689999998664 2334567999999999999874
No 114
>2pcn_A S-adenosylmethionine:2-demethylmenaquinone methyltransferase; beta, beta alpha domain; 1.90A {Geobacillus kaustophilus}
Probab=25.37 E-value=1.4e+02 Score=27.52 Aligned_cols=66 Identities=26% Similarity=0.368 Sum_probs=41.5
Q ss_pred cccCCCCcceEEeEEEecCCChhchHHHH-hcCCcccceEEEEEeCCC-----cchhHHHHHHHcCCeEEEEEe
Q 005260 134 FHGYAKSGTVIGPVVYVNYGRVEDYVTLK-EMVVNVTGTVVLARYGQI-----FRGDIVHNAFEAGAAGALIFT 201 (705)
Q Consensus 134 ~~a~S~~G~v~g~lVyv~~G~~~D~~~L~-~~gv~v~GkIvl~~~g~~-----~~~~k~~~A~~~GA~gvi~~~ 201 (705)
+.++.+...+-|+.+=+-+. +|-..+. .....-.|+|+++..++. +-+.....|+++|++|+|+.-
T Consensus 21 ~~~~~~~~~~~G~A~Tv~~~--~dn~~~~~al~~~~~G~VlVvd~~g~~~~a~~G~~la~~a~~~G~~GiVidG 92 (161)
T 2pcn_A 21 FQSYGGKRMFSGPIATVDVF--EDNVLVREALETVPPGTVLVVDGKGSRRVALLGDRLAQIACERGLAGVIIHG 92 (161)
T ss_dssp CEECSSCSCEEEEEEEEECS--SBCHHHHHHHHHSCTTCEEEEECTTCCSSEEECHHHHHHHHHTTCCEEEEEE
T ss_pred ceeCCCCCEEEEEEEEEEEe--cCchHHHHHHHhcCCCCEEEEECCCCCCceeehHHHHHHHHHcCCcEEEecc
Confidence 33455555677777777653 2211111 112357899999996542 224567899999999999875
No 115
>2vpu_A TET3, 354AA long hypothetical operon protein FRV; unknown function, protease, thermophilic, SELF-compartmentalising, hydrolase; 1.9A {Pyrococcus horikoshii} PDB: 2wzn_A 2pe3_A
Probab=23.57 E-value=32 Score=36.23 Aligned_cols=50 Identities=16% Similarity=0.201 Sum_probs=38.4
Q ss_pred HHHHHHHHhhcCCCCCCCHhhHHHHHHHHHHHHHCCCceeeeEE-EEEEeee
Q 005260 43 SISHHLHTLTRRPHVAGSEANAEAAAYVLSVFTSCSLESHIASY-GVSLTYP 93 (705)
Q Consensus 43 ~i~~~L~~lss~~r~aGt~g~~~~a~~i~~~~~~~Gl~~~~~~y-~v~~~~P 93 (705)
.+.+.|+.|++.|..+|.+. .+.++|+++.++++|++++.+.+ .++...+
T Consensus 10 ~~~~~l~~L~~ipspSG~E~-~~v~~~l~~~l~~~g~~~~~D~~GNvi~~~~ 60 (354)
T 2vpu_A 10 VDWKLMQEIIEAPGVSGYEH-LGIRDIVVDVLKEVADEVKVDKLGNVIAHFK 60 (354)
T ss_dssp CCHHHHHHHHHSCCBTTCGG-GTHHHHHHHHHHTTCSEEEECTTCCEEEEEC
T ss_pred HHHHHHHHHHhCCCCCcccH-HHHHHHHHHHHHHhCCEEEEcCCCeEEEEEc
Confidence 35678999999999999742 28899999999999998876653 3444444
No 116
>2f7v_A Aectylcitrulline deacetylase; alpha/beta, hydrolase; 1.75A {Xanthomonas campestris} PDB: 2f8h_A
Probab=22.57 E-value=59 Score=33.86 Aligned_cols=43 Identities=16% Similarity=0.152 Sum_probs=34.4
Q ss_pred hhHHHHHHHHhhcCCCCC--C-CHhhHHHHHHHHHHHHHCCCceeeeE
Q 005260 41 NVSISHHLHTLTRRPHVA--G-SEANAEAAAYVLSVFTSCSLESHIAS 85 (705)
Q Consensus 41 ~~~i~~~L~~lss~~r~a--G-t~g~~~~a~~i~~~~~~~Gl~~~~~~ 85 (705)
.+++.+.++.|.+.|..+ | ++++.++++||.+.|+ |++++..+
T Consensus 8 ~~~~~~~l~~l~~ips~s~~~~~~~e~~~~~~l~~~l~--G~~~~~~~ 53 (369)
T 2f7v_A 8 LASTLEHLETLVSFDTRNPPRAIAAEGGIFDYLRAQLP--GFQVEVID 53 (369)
T ss_dssp HHHHHHHHHHHHHSCCBTTTTCCCSSSHHHHHHHTTCT--TCEEEEEE
T ss_pred hHHHHHHHHHHhCCCCcCCCCCCccHHHHHHHHHHHhC--CCceEEEE
Confidence 467888899999888766 3 2368899999999998 99886654
No 117
>3cpx_A Aminopeptidase, M42 family; YP_676701.1, putative M42 glutamyl aminopeptidase, structura genomics; 2.39A {Cytophaga hutchinsonii atcc 33406}
Probab=21.97 E-value=34 Score=35.26 Aligned_cols=41 Identities=12% Similarity=0.066 Sum_probs=33.3
Q ss_pred HHHHHHHHhhcCCCCCCCHhhHHHHHHHHHHHHHCCCceeeeE
Q 005260 43 SISHHLHTLTRRPHVAGSEANAEAAAYVLSVFTSCSLESHIAS 85 (705)
Q Consensus 43 ~i~~~L~~lss~~r~aGt~g~~~~a~~i~~~~~~~Gl~~~~~~ 85 (705)
.+.+.|+.|.+.|..+|. +.+.++|+++.|+++|++++.++
T Consensus 18 ~~~~~l~~Lv~i~s~sg~--e~~v~~~l~~~l~~~g~~v~~d~ 58 (321)
T 3cpx_A 18 QGMQLLKELCSIHAPSGN--EEPLKDFILEYIRSNAGSWSYQP 58 (321)
T ss_dssp CHHHHHHHHHHSCCBTTC--CHHHHHHHHHHHHHHGGGSSSCC
T ss_pred HHHHHHHHHHcCCCCCCC--HHHHHHHHHHHHHhhCCeEEEcc
Confidence 367789999999888876 44679999999999999876544
No 118
>3khx_A Putative dipeptidase sacol1801; DAPE, metallopeptidase, hydrolase, metal-bindin metalloprotease, protease; 2.30A {Staphylococcus aureus} PDB: 3ki9_A 3khz_A
Probab=21.96 E-value=1e+02 Score=33.65 Aligned_cols=44 Identities=16% Similarity=0.141 Sum_probs=35.7
Q ss_pred ChhHHHHHHHHhhcCCCCCCC----------HhhHHHHHHHHHHHHHCCCceee
Q 005260 40 DNVSISHHLHTLTRRPHVAGS----------EANAEAAAYVLSVFTSCSLESHI 83 (705)
Q Consensus 40 ~~~~i~~~L~~lss~~r~aGt----------~g~~~~a~~i~~~~~~~Gl~~~~ 83 (705)
..+++.+.++.|-+.|-.++. ++..++++||.+.|+++|++++.
T Consensus 32 ~~~~~~~~l~~lv~ips~s~~e~~~~~~p~g~~~~~~~~~l~~~l~~~G~~~~~ 85 (492)
T 3khx_A 32 YEDQIINDLKGLLAIESVRDDAKASEDAPVGPGPRKALDYMYEIAHRDGFTTHD 85 (492)
T ss_dssp THHHHHHHHHHHHTSCCCCCSSSCCSSSTTCHHHHHHHHHHHHHHHHTTCEEEE
T ss_pred hHHHHHHHHHHHhcCCCCCCCcccccccccchHHHHHHHHHHHHHHHcCCcceE
Confidence 456788889999988766654 35679999999999999998754
No 119
>3k4i_A Uncharacterized protein; structural genomics, protein structure INI NEW YORK structural genomix research consortium, nysgxrc; 1.69A {Pseudomonas syringae PV}
Probab=21.29 E-value=1.6e+02 Score=29.19 Aligned_cols=35 Identities=20% Similarity=0.355 Sum_probs=27.2
Q ss_pred cccceEEEEEeCC-----CcchhHHHHHHHcCCeEEEEEe
Q 005260 167 NVTGTVVLARYGQ-----IFRGDIVHNAFEAGAAGALIFT 201 (705)
Q Consensus 167 ~v~GkIvl~~~g~-----~~~~~k~~~A~~~GA~gvi~~~ 201 (705)
.-.|+|+++..++ ++-+.....|+.+|++|+|+..
T Consensus 81 ~~~GdVlVvd~~g~~~~A~~G~lla~~a~~~G~aGvVidG 120 (244)
T 3k4i_A 81 VPSGSVIVSSNSGRHDCTVWGDIMTHFALANGIKGTVIDG 120 (244)
T ss_dssp CCTTEEEEEECTTCSSSBSCCHHHHHHHHHHTCCEEEEES
T ss_pred CCCCeEEEEECCCCCCeEehHHHHHHHHHHCCCeEEEeCC
Confidence 4689999998654 2334567899999999999874
No 120
>1vho_A Endoglucanase; structural genomics, unknown function; HET: MSE; 1.86A {Thermotoga maritima} SCOP: b.49.3.1 c.56.5.4
Probab=20.76 E-value=62 Score=33.35 Aligned_cols=41 Identities=17% Similarity=0.209 Sum_probs=33.1
Q ss_pred HHHHHHHHhhcCCCCCCCHhhHHHHHHHHHHHHHCCCceeeeE
Q 005260 43 SISHHLHTLTRRPHVAGSEANAEAAAYVLSVFTSCSLESHIAS 85 (705)
Q Consensus 43 ~i~~~L~~lss~~r~aGt~g~~~~a~~i~~~~~~~Gl~~~~~~ 85 (705)
++.+.|+.|.+.|-.+|. +.++++||++.|+++|++++.+.
T Consensus 6 ~~~~~l~~Lv~~~s~sg~--e~~~~~~l~~~l~~~g~~~~~d~ 46 (346)
T 1vho_A 6 ETGKLLMELSNLDGPSGY--ETNVVSYIKSVIEPFVDEAKTTR 46 (346)
T ss_dssp CHHHHHHHHHHSCCBTTC--CHHHHHHHHHHHGGGCSEEEECT
T ss_pred HHHHHHHHHHcCCCCCcc--hHHHHHHHHHHHHhhCCEEEEec
Confidence 456788899988887775 45789999999999999876543
No 121
>2glf_A Probable M18-family aminopeptidase 1; putative, NYSGXRC, structural genomics, PS protein structure initiative; 2.80A {Thermotoga maritima}
Probab=20.65 E-value=38 Score=36.94 Aligned_cols=27 Identities=11% Similarity=0.033 Sum_probs=21.3
Q ss_pred eeEEEEecCCCCCCcEEEEeeccCCcC
Q 005260 325 QNVIGIIPGTEEPDRLVILGNHRDAWT 351 (705)
Q Consensus 325 ~NVia~i~G~~~p~~~ViigaH~Ds~~ 351 (705)
.|+||...|....+.++|++||.|+..
T Consensus 71 ~~lia~~~g~~~~~g~~ii~AH~Dsp~ 97 (450)
T 2glf_A 71 KAIAAFRVVDDLKRGLNLVVAHIDSPR 97 (450)
T ss_dssp SCEEEEEBCSCGGGCCEEEEEECCCCE
T ss_pred CEEEEEEeCCCCCCCeEEEEEecccCC
Confidence 689999888631246899999999975
No 122
>3io1_A Aminobenzoyl-glutamate utilization protein; peptidase_M20D superfamily, protein structure initiative II, NYSGXRC, structural genomics; 2.50A {Klebsiella pneumoniae subsp}
Probab=20.15 E-value=1e+02 Score=33.07 Aligned_cols=41 Identities=7% Similarity=0.058 Sum_probs=33.7
Q ss_pred hhHHHHHHHHhhcCCCCCCCHhhHHHHHHHHHHHHHCCCceee
Q 005260 41 NVSISHHLHTLTRRPHVAGSEANAEAAAYVLSVFTSCSLESHI 83 (705)
Q Consensus 41 ~~~i~~~L~~lss~~r~aGt~g~~~~a~~i~~~~~~~Gl~~~~ 83 (705)
.+++.+..++|-+.|=+++. +.++++||.+.|+++|++++.
T Consensus 13 ~~~~~~~~~~lh~~Pe~~~~--E~~t~~~i~~~L~~~G~~v~~ 53 (445)
T 3io1_A 13 APSMTQWRRDFHLHAESGWL--EFRTASKVADILDGLGYQLAL 53 (445)
T ss_dssp HHHHHHHHHHHHHTCCCTTC--CHHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHHHhCCCCCCc--HHHHHHHHHHHHHHCCCeEEe
Confidence 45677788888888877765 788999999999999998754
Done!